Query 004954
Match_columns 722
No_of_seqs 396 out of 3005
Neff 7.2
Searched_HMMs 46136
Date Thu Mar 28 15:39:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004954.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/004954hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0696 Serine/threonine prote 100.0 3E-71 6.4E-76 577.8 17.3 425 201-720 148-611 (683)
2 KOG0667 Dual-specificity tyros 100.0 3.8E-55 8.2E-60 485.3 26.0 319 397-719 169-506 (586)
3 KOG0575 Polo-like serine/threo 100.0 5.9E-48 1.3E-52 423.8 25.5 252 413-722 17-276 (592)
4 KOG0615 Serine/threonine prote 100.0 6E-49 1.3E-53 413.2 16.8 259 410-720 168-442 (475)
5 KOG0661 MAPK related serine/th 100.0 7.9E-49 1.7E-53 418.5 14.1 283 411-721 7-297 (538)
6 KOG0581 Mitogen-activated prot 100.0 6.8E-47 1.5E-51 395.6 19.9 253 412-720 77-340 (364)
7 KOG0659 Cdk activating kinase 100.0 1.1E-46 2.4E-51 377.0 18.7 278 414-720 2-286 (318)
8 KOG0593 Predicted protein kina 100.0 4.9E-47 1.1E-51 385.0 15.3 279 414-719 2-288 (396)
9 KOG0600 Cdc2-related protein k 100.0 3.9E-45 8.5E-50 392.8 19.8 282 409-718 112-403 (560)
10 KOG0598 Ribosomal protein S6 k 100.0 8.9E-45 1.9E-49 379.6 21.1 253 412-720 23-286 (357)
11 KOG0660 Mitogen-activated prot 100.0 1.3E-44 2.8E-49 377.1 20.9 280 412-720 20-315 (359)
12 KOG0671 LAMMER dual specificit 100.0 5.2E-45 1.1E-49 381.0 15.7 314 401-720 76-411 (415)
13 KOG0663 Protein kinase PITSLRE 100.0 1.4E-44 3E-49 371.4 18.4 285 409-720 71-366 (419)
14 PTZ00284 protein kinase; Provi 100.0 5.7E-43 1.2E-47 396.6 30.6 299 413-721 128-444 (467)
15 KOG0592 3-phosphoinositide-dep 100.0 6.7E-44 1.5E-48 386.0 21.5 251 413-720 72-343 (604)
16 KOG0616 cAMP-dependent protein 100.0 1.2E-43 2.7E-48 359.8 20.5 250 413-720 43-302 (355)
17 KOG1290 Serine/threonine prote 100.0 5E-43 1.1E-47 374.3 25.3 319 393-720 56-555 (590)
18 cd07871 STKc_PCTAIRE3 Catalyti 100.0 1.3E-42 2.8E-47 368.0 28.0 278 414-718 5-288 (288)
19 cd07848 STKc_CDKL5 Catalytic d 100.0 4.5E-42 9.8E-47 362.2 27.0 280 414-718 1-287 (287)
20 KOG0583 Serine/threonine prote 100.0 3.4E-42 7.3E-47 377.1 26.3 255 411-720 14-280 (370)
21 KOG0658 Glycogen synthase kina 100.0 5.7E-43 1.2E-47 365.3 18.5 280 414-720 24-311 (364)
22 KOG0670 U4/U6-associated splic 100.0 6.9E-44 1.5E-48 381.9 11.2 316 401-721 419-752 (752)
23 cd07869 STKc_PFTAIRE1 Catalyti 100.0 8.7E-42 1.9E-46 364.0 27.1 283 413-720 4-293 (303)
24 KOG0595 Serine/threonine-prote 100.0 3E-42 6.5E-47 363.4 23.0 255 412-719 8-272 (429)
25 KOG0694 Serine/threonine prote 100.0 1.5E-42 3.2E-47 385.1 21.7 254 410-720 364-629 (694)
26 KOG0594 Protein kinase PCTAIRE 100.0 1.6E-42 3.6E-47 362.3 20.3 284 414-720 11-307 (323)
27 KOG0605 NDR and related serine 100.0 4.8E-42 1E-46 372.0 22.6 254 412-720 139-450 (550)
28 KOG0588 Serine/threonine prote 100.0 2.6E-42 5.7E-47 380.1 20.6 249 414-720 12-268 (786)
29 cd07862 STKc_CDK6 Catalytic do 100.0 2E-41 4.2E-46 357.9 26.3 279 414-718 1-290 (290)
30 cd07876 STKc_JNK2 Catalytic do 100.0 3.2E-41 6.9E-46 368.8 28.7 298 403-720 7-320 (359)
31 cd07859 STKc_TDY_MAPK_plant Ca 100.0 3.4E-41 7.3E-46 363.9 27.4 277 415-720 1-295 (338)
32 PTZ00036 glycogen synthase kin 100.0 4.4E-41 9.5E-46 378.4 27.8 282 412-720 64-356 (440)
33 cd07872 STKc_PCTAIRE2 Catalyti 100.0 8.6E-41 1.9E-45 357.3 27.7 280 414-720 6-291 (309)
34 cd07874 STKc_JNK3 Catalytic do 100.0 9.7E-41 2.1E-45 364.3 27.8 290 411-720 14-316 (355)
35 KOG0582 Ste20-like serine/thre 100.0 6E-41 1.3E-45 355.9 24.6 265 411-721 23-299 (516)
36 cd07863 STKc_CDK4 Catalytic do 100.0 1.3E-40 2.8E-45 350.9 26.6 278 415-718 1-288 (288)
37 cd05612 STKc_PRKX_like Catalyt 100.0 4.6E-41 9.9E-46 356.8 23.1 249 414-720 1-259 (291)
38 KOG0578 p21-activated serine/t 100.0 6.1E-42 1.3E-46 373.8 16.7 251 414-720 273-528 (550)
39 KOG0033 Ca2+/calmodulin-depend 100.0 5.4E-43 1.2E-47 346.2 7.6 259 410-720 7-272 (355)
40 cd07875 STKc_JNK1 Catalytic do 100.0 2E-40 4.4E-45 363.1 28.1 290 412-720 22-323 (364)
41 PHA03212 serine/threonine kina 100.0 1.1E-40 2.4E-45 369.6 25.7 280 412-720 90-381 (391)
42 PTZ00263 protein kinase A cata 100.0 9.6E-41 2.1E-45 361.1 24.2 250 413-720 17-276 (329)
43 KOG0597 Serine-threonine prote 100.0 7.3E-42 1.6E-46 369.6 14.6 250 414-721 2-257 (808)
44 cd07853 STKc_NLK Catalytic dom 100.0 2.4E-40 5.3E-45 363.8 25.0 279 415-720 1-293 (372)
45 KOG0032 Ca2+/calmodulin-depend 100.0 2.9E-40 6.2E-45 362.1 24.9 260 409-720 30-298 (382)
46 cd07878 STKc_p38beta_MAPK11 Ca 100.0 4.3E-40 9.2E-45 357.3 23.5 279 412-720 13-303 (343)
47 PTZ00426 cAMP-dependent protei 100.0 6.2E-40 1.4E-44 356.9 24.8 254 409-720 25-289 (340)
48 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 7.9E-40 1.7E-44 354.0 25.0 257 414-720 1-262 (333)
49 cd07873 STKc_PCTAIRE1 Catalyti 100.0 1.7E-39 3.7E-44 345.7 27.2 278 414-720 6-291 (301)
50 cd07868 STKc_CDK8 Catalytic do 100.0 1.4E-39 3E-44 348.8 26.2 287 419-718 6-317 (317)
51 KOG0585 Ca2+/calmodulin-depend 100.0 2.2E-40 4.8E-45 353.3 18.8 256 410-721 93-378 (576)
52 cd05571 STKc_PKB Catalytic dom 100.0 6.1E-40 1.3E-44 353.8 22.6 243 420-720 1-256 (323)
53 KOG0198 MEKK and related serin 100.0 1.6E-40 3.4E-45 352.1 17.5 254 413-720 16-281 (313)
54 cd05589 STKc_PKN Catalytic dom 100.0 1.8E-39 3.9E-44 350.0 25.2 249 416-720 1-262 (324)
55 cd05628 STKc_NDR1 Catalytic do 100.0 2.5E-39 5.4E-44 354.8 26.3 252 414-720 1-298 (363)
56 cd07850 STKc_JNK Catalytic dom 100.0 3.1E-39 6.7E-44 352.4 26.8 298 403-720 2-316 (353)
57 cd07839 STKc_CDK5 Catalytic do 100.0 2.5E-39 5.4E-44 340.4 24.6 276 415-718 1-284 (284)
58 cd05631 STKc_GRK4 Catalytic do 100.0 1.9E-39 4.1E-44 343.2 23.3 254 415-720 1-266 (285)
59 KOG0591 NIMA (never in mitosis 100.0 2.8E-41 6.1E-46 340.1 8.7 245 413-709 18-275 (375)
60 cd07861 STKc_CDK1_euk Catalyti 100.0 1.1E-38 2.4E-43 335.4 28.0 278 415-718 1-285 (285)
61 cd05587 STKc_cPKC Catalytic do 100.0 6.1E-39 1.3E-43 345.9 26.0 249 415-720 1-262 (324)
62 cd05599 STKc_NDR_like Catalyti 100.0 3E-39 6.5E-44 353.5 23.9 252 414-720 1-301 (364)
63 cd06649 PKc_MEK2 Catalytic dom 100.0 5.3E-39 1.2E-43 347.6 25.3 291 412-721 3-307 (331)
64 cd05573 STKc_ROCK_NDR_like Cat 100.0 1.9E-39 4.1E-44 352.5 21.7 252 414-720 1-290 (350)
65 KOG0599 Phosphorylase kinase g 100.0 2.9E-40 6.3E-45 331.1 13.7 253 414-719 17-287 (411)
66 cd05585 STKc_YPK1_like Catalyt 100.0 5.4E-39 1.2E-43 344.5 23.6 241 422-720 1-252 (312)
67 cd05626 STKc_LATS2 Catalytic d 100.0 6E-39 1.3E-43 354.1 24.5 252 415-720 2-310 (381)
68 cd05625 STKc_LATS1 Catalytic d 100.0 5.6E-39 1.2E-43 354.2 24.0 251 415-720 2-310 (382)
69 cd07867 STKc_CDC2L6 Catalytic 100.0 1.4E-38 3E-43 340.4 26.4 286 419-718 6-317 (317)
70 cd05629 STKc_NDR_like_fungal C 100.0 3.7E-39 8E-44 355.0 22.4 252 414-720 1-310 (377)
71 cd05593 STKc_PKB_gamma Catalyt 100.0 6E-39 1.3E-43 347.1 23.0 244 420-721 1-257 (328)
72 cd05590 STKc_nPKC_eta Catalyti 100.0 8.2E-39 1.8E-43 344.7 23.7 244 420-720 1-258 (320)
73 cd05616 STKc_cPKC_beta Catalyt 100.0 1.2E-38 2.7E-43 343.4 25.0 249 415-720 1-262 (323)
74 cd05591 STKc_nPKC_epsilon Cata 100.0 1.1E-38 2.5E-43 343.4 23.4 244 420-720 1-259 (321)
75 cd05595 STKc_PKB_beta Catalyti 100.0 1.1E-38 2.3E-43 344.2 23.3 243 420-720 1-256 (323)
76 cd05598 STKc_LATS Catalytic do 100.0 5.6E-39 1.2E-43 353.3 21.3 252 414-720 1-306 (376)
77 cd05620 STKc_nPKC_delta Cataly 100.0 1.4E-38 2.9E-43 342.4 23.8 244 420-720 1-253 (316)
78 cd07845 STKc_CDK10 Catalytic d 100.0 2.9E-38 6.3E-43 337.5 26.1 281 413-720 6-295 (309)
79 PF00069 Pkinase: Protein kina 100.0 2.3E-38 5.1E-43 327.3 24.5 252 416-718 1-260 (260)
80 cd07832 STKc_CCRK Catalytic do 100.0 5E-38 1.1E-42 330.2 27.2 278 415-719 1-286 (286)
81 PHA03209 serine/threonine kina 100.0 1.8E-38 3.8E-43 347.5 24.7 277 414-720 66-356 (357)
82 KOG0580 Serine/threonine prote 100.0 2.5E-39 5.5E-44 320.2 15.5 259 410-720 18-278 (281)
83 cd05601 STKc_CRIK Catalytic do 100.0 6.4E-39 1.4E-43 346.2 20.2 253 414-720 1-268 (330)
84 cd05596 STKc_ROCK Catalytic do 100.0 1.4E-38 3E-43 350.2 23.1 253 413-720 42-309 (370)
85 PHA03207 serine/threonine kina 100.0 2.8E-38 6.1E-43 350.3 25.3 282 410-720 88-380 (392)
86 cd06650 PKc_MEK1 Catalytic dom 100.0 2.4E-38 5.2E-43 343.1 24.0 291 412-721 3-305 (333)
87 cd05592 STKc_nPKC_theta_delta 100.0 2.4E-38 5.3E-43 340.4 23.8 244 420-720 1-253 (316)
88 cd05570 STKc_PKC Catalytic dom 100.0 2.5E-38 5.5E-43 340.4 23.7 244 420-720 1-257 (318)
89 cd05614 STKc_MSK2_N N-terminal 100.0 3E-38 6.5E-43 341.3 24.4 249 415-720 1-272 (332)
90 cd05594 STKc_PKB_alpha Catalyt 100.0 1.1E-38 2.4E-43 344.0 20.9 244 420-721 1-258 (325)
91 cd07844 STKc_PCTAIRE_like Cata 100.0 9.8E-38 2.1E-42 329.8 27.6 279 413-718 4-291 (291)
92 cd05621 STKc_ROCK2 Catalytic d 100.0 2.4E-38 5.2E-43 348.4 23.6 253 413-720 42-309 (370)
93 cd05627 STKc_NDR2 Catalytic do 100.0 2.2E-38 4.9E-43 346.7 23.0 252 414-720 1-298 (360)
94 cd05619 STKc_nPKC_theta Cataly 100.0 3.9E-38 8.4E-43 339.0 24.3 244 420-720 1-253 (316)
95 cd07860 STKc_CDK2_3 Catalytic 100.0 6.8E-38 1.5E-42 329.5 25.5 277 415-718 1-284 (284)
96 cd07870 STKc_PFTAIRE2 Catalyti 100.0 1.8E-37 3.9E-42 328.0 28.6 279 414-718 5-291 (291)
97 cd07837 STKc_CdkB_plant Cataly 100.0 1.6E-37 3.5E-42 328.4 27.8 283 414-719 1-295 (295)
98 KOG0610 Putative serine/threon 100.0 1E-38 2.2E-43 336.7 18.4 256 412-720 75-397 (459)
99 cd07847 STKc_CDKL1_4 Catalytic 100.0 2.4E-37 5.2E-42 325.0 28.7 279 414-718 1-286 (286)
100 cd07841 STKc_CDK7 Catalytic do 100.0 7.8E-38 1.7E-42 331.7 24.9 279 415-722 1-289 (298)
101 KOG4717 Serine/threonine prote 100.0 1.2E-38 2.5E-43 341.0 18.4 257 408-720 12-275 (864)
102 KOG0611 Predicted serine/threo 100.0 4.1E-39 8.8E-44 336.6 14.2 253 411-722 50-310 (668)
103 cd05615 STKc_cPKC_alpha Cataly 100.0 1E-37 2.2E-42 336.6 25.7 249 415-720 1-262 (323)
104 cd07831 STKc_MOK Catalytic dom 100.0 2.4E-37 5.2E-42 324.4 27.8 273 416-718 1-282 (282)
105 KOG0201 Serine/threonine prote 100.0 1.1E-39 2.4E-44 346.2 9.7 248 414-720 13-268 (467)
106 cd05588 STKc_aPKC Catalytic do 100.0 6.4E-38 1.4E-42 339.0 23.5 253 420-720 1-267 (329)
107 KOG0662 Cyclin-dependent kinas 100.0 1E-38 2.2E-43 303.1 14.7 278 415-720 3-288 (292)
108 cd05605 STKc_GRK4_like Catalyt 100.0 1.4E-37 3.1E-42 328.8 25.3 254 415-720 1-266 (285)
109 cd05584 STKc_p70S6K Catalytic 100.0 7.6E-38 1.6E-42 337.5 23.4 243 420-720 2-261 (323)
110 cd07865 STKc_CDK9 Catalytic do 100.0 2E-37 4.4E-42 329.4 26.3 281 413-718 11-310 (310)
111 PLN00009 cyclin-dependent kina 100.0 3.2E-37 6.9E-42 326.7 27.5 281 414-720 2-289 (294)
112 cd07842 STKc_CDK8_like Catalyt 100.0 1.5E-37 3.3E-42 331.6 25.2 287 415-718 1-316 (316)
113 cd05597 STKc_DMPK_like Catalyt 100.0 1.8E-37 3.9E-42 335.8 25.8 255 414-720 1-271 (331)
114 PHA03211 serine/threonine kina 100.0 1.2E-37 2.5E-42 351.5 25.3 279 412-720 167-460 (461)
115 cd05618 STKc_aPKC_iota Catalyt 100.0 1.1E-37 2.4E-42 337.4 23.6 245 420-720 1-267 (329)
116 KOG0666 Cyclin C-dependent kin 100.0 7.1E-39 1.5E-43 326.2 13.2 293 414-720 24-342 (438)
117 PLN00034 mitogen-activated pro 100.0 5E-38 1.1E-42 343.0 20.8 251 414-721 74-334 (353)
118 KOG0192 Tyrosine kinase specif 100.0 1.3E-37 2.8E-42 338.6 23.4 245 414-714 41-298 (362)
119 cd05575 STKc_SGK Catalytic dom 100.0 9.3E-38 2E-42 336.6 22.0 243 420-720 1-256 (323)
120 cd07843 STKc_CDC2L1 Catalytic 100.0 3E-37 6.4E-42 326.7 25.5 278 414-718 5-293 (293)
121 cd05622 STKc_ROCK1 Catalytic d 100.0 1.4E-37 3E-42 342.4 23.8 254 412-720 41-309 (371)
122 cd07836 STKc_Pho85 Catalytic d 100.0 5.6E-37 1.2E-41 322.2 27.3 276 415-718 1-284 (284)
123 PTZ00024 cyclin-dependent prot 100.0 2.4E-37 5.3E-42 334.4 24.9 280 411-720 5-318 (335)
124 cd07833 STKc_CDKL Catalytic do 100.0 4.6E-37 1E-41 323.2 26.1 279 414-718 1-288 (288)
125 cd05608 STKc_GRK1 Catalytic do 100.0 2.5E-37 5.5E-42 326.1 24.1 249 422-720 1-262 (280)
126 cd07849 STKc_ERK1_2_like Catal 100.0 2.9E-37 6.4E-42 334.3 25.1 280 412-721 3-298 (336)
127 PTZ00283 serine/threonine prot 100.0 3.4E-37 7.4E-42 351.6 26.2 256 411-719 29-301 (496)
128 cd05582 STKc_RSK_N N-terminal 100.0 7E-38 1.5E-42 336.6 19.3 243 420-720 2-259 (318)
129 cd05580 STKc_PKA Catalytic dom 100.0 7.4E-37 1.6E-41 323.7 26.6 249 414-720 1-259 (290)
130 KOG0197 Tyrosine kinases [Sign 100.0 1E-37 2.2E-42 340.1 20.1 243 415-713 207-455 (468)
131 cd05586 STKc_Sck1_like Catalyt 100.0 7E-38 1.5E-42 338.4 18.5 245 422-720 1-258 (330)
132 PHA03210 serine/threonine kina 100.0 2.9E-37 6.4E-42 352.8 24.2 291 409-720 143-459 (501)
133 cd05623 STKc_MRCK_alpha Cataly 100.0 5.3E-37 1.2E-41 332.1 24.9 255 414-720 1-271 (332)
134 cd07835 STKc_CDK1_like Catalyt 100.0 8.4E-37 1.8E-41 321.1 25.2 276 416-718 1-283 (283)
135 cd05604 STKc_SGK3 Catalytic do 100.0 1.9E-37 4.1E-42 334.5 20.7 243 420-720 1-256 (325)
136 cd05617 STKc_aPKC_zeta Catalyt 100.0 5.9E-37 1.3E-41 331.2 24.6 245 420-720 1-265 (327)
137 cd07840 STKc_CDK9_like Catalyt 100.0 9.8E-37 2.1E-41 319.8 25.4 276 416-718 1-287 (287)
138 cd05624 STKc_MRCK_beta Catalyt 100.0 5.7E-37 1.2E-41 331.9 24.1 255 414-720 1-271 (331)
139 cd05630 STKc_GRK6 Catalytic do 100.0 6.2E-37 1.3E-41 324.2 23.8 254 415-720 1-266 (285)
140 PTZ00267 NIMA-related protein 100.0 8.9E-37 1.9E-41 347.0 26.8 254 413-719 66-327 (478)
141 cd06619 PKc_MKK5 Catalytic dom 100.0 4.7E-37 1E-41 323.5 22.6 255 414-720 1-258 (279)
142 cd07846 STKc_CDKL2_3 Catalytic 100.0 9E-37 2E-41 321.0 24.7 279 414-718 1-286 (286)
143 cd06625 STKc_MEKK3_like Cataly 100.0 1.4E-36 3.1E-41 315.2 25.3 249 414-718 2-263 (263)
144 cd07858 STKc_TEY_MAPK_plant Ca 100.0 8.1E-37 1.8E-41 331.2 24.2 280 412-720 3-296 (337)
145 cd07834 STKc_MAPK Catalytic do 100.0 5.2E-37 1.1E-41 330.7 22.5 277 415-720 1-294 (330)
146 cd08227 PK_STRAD_alpha Pseudok 100.0 8.8E-37 1.9E-41 329.4 24.2 284 418-720 2-312 (327)
147 KOG0579 Ste20-like serine/thre 100.0 1.4E-38 3.1E-43 346.1 10.1 254 414-720 32-294 (1187)
148 cd06637 STKc_TNIK Catalytic do 100.0 1.2E-36 2.5E-41 317.8 24.1 253 413-718 5-272 (272)
149 cd05603 STKc_SGK2 Catalytic do 100.0 4.9E-37 1.1E-41 330.5 21.8 243 420-720 1-256 (321)
150 cd05602 STKc_SGK1 Catalytic do 100.0 5.2E-37 1.1E-41 331.1 21.9 243 420-720 1-256 (325)
151 cd05632 STKc_GRK5 Catalytic do 100.0 1.8E-36 3.9E-41 320.5 25.3 254 415-720 1-266 (285)
152 cd07879 STKc_p38delta_MAPK13 C 100.0 1.6E-36 3.5E-41 329.7 25.5 280 412-720 13-302 (342)
153 cd07880 STKc_p38gamma_MAPK12 C 100.0 2.6E-36 5.6E-41 328.4 26.9 281 412-720 13-303 (343)
154 cd06636 STKc_MAP4K4_6 Catalyti 100.0 1.3E-36 2.9E-41 319.7 23.9 254 412-718 14-282 (282)
155 cd07851 STKc_p38 Catalytic dom 100.0 1E-36 2.2E-41 331.4 23.7 279 412-720 13-303 (343)
156 cd08529 STKc_FA2-like Catalyti 100.0 4.2E-36 9.2E-41 310.1 27.1 249 415-718 1-256 (256)
157 cd07866 STKc_BUR1 Catalytic do 100.0 1.9E-36 4.1E-41 322.1 25.0 280 412-718 6-311 (311)
158 KOG0589 Serine/threonine prote 100.0 1.3E-37 2.8E-42 338.2 16.0 251 414-719 4-262 (426)
159 cd07855 STKc_ERK5 Catalytic do 100.0 1E-36 2.2E-41 329.8 22.9 280 412-720 3-299 (334)
160 cd07864 STKc_CDK12 Catalytic d 100.0 2.2E-36 4.8E-41 320.8 24.9 283 409-718 2-302 (302)
161 cd05607 STKc_GRK7 Catalytic do 100.0 1.8E-36 3.9E-41 319.1 23.7 248 422-720 1-259 (277)
162 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 5.7E-36 1.2E-40 323.8 27.9 279 412-720 8-293 (328)
163 cd06615 PKc_MEK Catalytic doma 100.0 2.9E-36 6.2E-41 322.7 25.3 287 414-721 1-293 (308)
164 cd05102 PTKc_VEGFR3 Catalytic 100.0 2.1E-36 4.6E-41 327.5 24.0 255 411-714 4-329 (338)
165 cd07854 STKc_MAPK4_6 Catalytic 100.0 3.6E-36 7.9E-41 326.9 25.8 279 413-720 4-305 (342)
166 cd06644 STKc_STK10_LOK Catalyt 100.0 4E-36 8.7E-41 318.2 25.4 255 413-720 11-274 (292)
167 cd07877 STKc_p38alpha_MAPK14 C 100.0 5.6E-36 1.2E-40 326.0 27.2 279 412-720 15-305 (345)
168 cd05118 STKc_CMGC Catalytic do 100.0 2.9E-36 6.3E-41 316.0 23.9 274 416-718 1-283 (283)
169 cd07838 STKc_CDK4_6_like Catal 100.0 7.3E-36 1.6E-40 313.6 26.8 277 416-718 1-287 (287)
170 cd08223 STKc_Nek4 Catalytic do 100.0 9.5E-36 2.1E-40 308.0 27.2 249 415-718 1-257 (257)
171 cd07857 STKc_MPK1 Catalytic do 100.0 7.4E-36 1.6E-40 322.8 27.5 279 415-719 1-296 (332)
172 cd06617 PKc_MKK3_6 Catalytic d 100.0 3.9E-36 8.5E-41 315.7 24.5 256 414-720 1-266 (283)
173 PTZ00266 NIMA-related protein 100.0 3.1E-36 6.8E-41 357.1 26.4 261 409-720 8-300 (1021)
174 cd05574 STKc_phototropin_like 100.0 5.1E-36 1.1E-40 321.0 25.4 254 414-721 1-295 (316)
175 cd07830 STKc_MAK_like Catalyti 100.0 4.1E-36 8.9E-41 315.5 24.0 276 416-718 1-283 (283)
176 cd06608 STKc_myosinIII_like Ca 100.0 6.8E-36 1.5E-40 311.2 25.4 256 413-718 5-275 (275)
177 cd06639 STKc_myosinIIIB Cataly 100.0 1.4E-35 3E-40 313.7 27.9 258 412-719 20-291 (291)
178 cd07829 STKc_CDK_like Catalyti 100.0 4.5E-36 9.7E-41 314.4 23.9 275 416-718 1-282 (282)
179 cd06612 STKc_MST1_2 Catalytic 100.0 5.6E-36 1.2E-40 309.2 24.2 250 414-718 3-256 (256)
180 cd06611 STKc_SLK_like Catalyti 100.0 3.6E-36 7.7E-41 316.1 23.0 253 414-720 5-267 (280)
181 cd06654 STKc_PAK1 Catalytic do 100.0 9.6E-36 2.1E-40 316.8 26.5 252 413-720 19-275 (296)
182 cd06638 STKc_myosinIIIA Cataly 100.0 1E-35 2.2E-40 313.4 26.3 257 412-718 16-286 (286)
183 cd06656 STKc_PAK3 Catalytic do 100.0 5.2E-36 1.1E-40 319.0 23.9 252 413-720 18-274 (297)
184 cd08218 STKc_Nek1 Catalytic do 100.0 1.2E-35 2.6E-40 307.3 25.8 249 415-718 1-256 (256)
185 cd06610 STKc_OSR1_SPAK Catalyt 100.0 1.4E-35 3.1E-40 307.7 26.2 256 414-718 1-267 (267)
186 cd06643 STKc_SLK Catalytic dom 100.0 7E-36 1.5E-40 314.5 24.2 252 416-720 7-267 (282)
187 KOG0604 MAP kinase-activated p 100.0 2.8E-37 6E-42 313.5 12.9 260 412-720 59-327 (400)
188 KOG0596 Dual specificity; seri 100.0 1E-36 2.2E-41 330.0 17.5 254 413-720 360-632 (677)
189 cd08221 STKc_Nek9 Catalytic do 100.0 2.9E-35 6.2E-40 304.6 27.5 249 415-718 1-256 (256)
190 cd06655 STKc_PAK2 Catalytic do 100.0 1.7E-35 3.7E-40 315.1 26.3 252 413-720 18-274 (296)
191 cd06609 STKc_MST3_like Catalyt 100.0 9.1E-36 2E-40 312.0 23.7 251 414-721 1-257 (274)
192 cd06628 STKc_MAPKKK_Byr2_like 100.0 1.3E-35 2.9E-40 309.0 24.7 247 415-718 1-267 (267)
193 KOG0574 STE20-like serine/thre 100.0 1.3E-38 2.8E-43 322.4 1.5 252 415-721 34-289 (502)
194 cd08220 STKc_Nek8 Catalytic do 100.0 2.2E-35 4.8E-40 304.8 25.7 250 415-718 1-256 (256)
195 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 5.5E-36 1.2E-40 315.7 21.6 256 414-720 1-267 (286)
196 KOG1989 ARK protein kinase fam 100.0 3.3E-36 7.2E-41 344.0 20.8 246 413-715 36-307 (738)
197 cd06631 STKc_YSK4 Catalytic do 100.0 2.3E-35 5E-40 307.1 25.5 248 415-718 1-265 (265)
198 cd06646 STKc_MAP4K5 Catalytic 100.0 1.2E-35 2.5E-40 309.7 23.2 252 413-717 8-267 (267)
199 cd06630 STKc_MEKK1 Catalytic d 100.0 9.3E-36 2E-40 310.0 22.2 253 415-719 1-268 (268)
200 cd06645 STKc_MAP4K3 Catalytic 100.0 6.5E-36 1.4E-40 311.6 21.0 252 413-717 8-267 (267)
201 cd06607 STKc_TAO Catalytic dom 100.0 1.8E-35 3.9E-40 316.0 24.7 256 410-721 11-273 (307)
202 cd05609 STKc_MAST Catalytic do 100.0 4.6E-35 9.9E-40 312.5 27.8 252 414-720 1-278 (305)
203 KOG0690 Serine/threonine prote 100.0 3E-37 6.6E-42 315.4 10.4 253 411-720 165-429 (516)
204 KOG4236 Serine/threonine prote 100.0 5.1E-37 1.1E-41 329.0 12.0 255 413-720 561-824 (888)
205 cd08217 STKc_Nek2 Catalytic do 100.0 4E-35 8.7E-40 303.3 25.8 251 415-718 1-265 (265)
206 cd06613 STKc_MAP4K3_like Catal 100.0 4.7E-35 1E-39 303.3 26.1 252 414-717 3-262 (262)
207 cd07852 STKc_MAPK15 Catalytic 100.0 1.4E-35 3.1E-40 321.1 23.1 281 411-720 4-300 (337)
208 cd06632 STKc_MEKK1_plant Catal 100.0 3.9E-35 8.4E-40 302.9 25.1 248 415-718 1-258 (258)
209 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 8.5E-35 1.9E-39 307.5 28.1 260 414-720 1-271 (287)
210 cd05096 PTKc_DDR1 Catalytic do 100.0 5.3E-35 1.1E-39 311.7 26.3 259 412-714 3-300 (304)
211 cd08225 STKc_Nek5 Catalytic do 100.0 4.9E-35 1.1E-39 302.4 24.7 250 415-718 1-257 (257)
212 cd06616 PKc_MKK4 Catalytic dom 100.0 1.8E-35 4E-40 312.0 21.9 261 414-720 4-272 (288)
213 cd05064 PTKc_EphR_A10 Catalyti 100.0 5.3E-35 1.1E-39 305.7 25.1 246 413-714 4-260 (266)
214 cd06605 PKc_MAPKK Catalytic do 100.0 1.5E-35 3.3E-40 307.9 20.2 252 414-720 1-262 (265)
215 cd06651 STKc_MEKK3 Catalytic d 100.0 6.6E-35 1.4E-39 304.5 24.7 249 414-719 2-265 (266)
216 cd05052 PTKc_Abl Catalytic dom 100.0 8.8E-35 1.9E-39 303.0 25.6 249 412-715 4-258 (263)
217 cd05611 STKc_Rim15_like Cataly 100.0 6.5E-35 1.4E-39 302.9 24.4 247 420-720 2-256 (260)
218 PHA02988 hypothetical protein; 100.0 7.4E-35 1.6E-39 308.5 24.9 237 420-714 26-274 (283)
219 cd05578 STKc_Yank1 Catalytic d 100.0 3E-35 6.6E-40 305.0 21.4 246 415-718 1-258 (258)
220 cd08219 STKc_Nek3 Catalytic do 100.0 1.1E-34 2.3E-39 300.4 25.4 246 415-715 1-252 (255)
221 cd05572 STKc_cGK_PKG Catalytic 100.0 7.6E-35 1.6E-39 302.7 24.2 243 422-720 1-257 (262)
222 cd06623 PKc_MAPKK_plant_like C 100.0 9.4E-35 2E-39 301.1 24.8 250 414-720 1-261 (264)
223 cd06917 STKc_NAK1_like Catalyt 100.0 7.6E-35 1.7E-39 305.2 24.1 253 415-721 2-261 (277)
224 cd05633 STKc_GRK3 Catalytic do 100.0 7.9E-35 1.7E-39 307.2 24.4 246 421-720 1-260 (279)
225 PHA03390 pk1 serine/threonine- 100.0 7E-35 1.5E-39 305.6 23.6 248 414-720 14-267 (267)
226 cd06629 STKc_MAPKKK_Bck1_like 100.0 1.2E-34 2.5E-39 303.0 25.1 252 415-718 2-272 (272)
227 cd05581 STKc_PDK1 Catalytic do 100.0 4.9E-35 1.1E-39 305.9 22.1 248 414-718 1-280 (280)
228 cd06640 STKc_MST4 Catalytic do 100.0 8.2E-35 1.8E-39 305.8 23.8 249 414-720 4-258 (277)
229 KOG0577 Serine/threonine prote 100.0 4.5E-36 9.7E-41 325.5 14.4 250 416-721 28-284 (948)
230 cd06652 STKc_MEKK2 Catalytic d 100.0 1.9E-34 4E-39 300.6 26.1 249 414-719 2-265 (265)
231 cd08215 STKc_Nek Catalytic dom 100.0 1.8E-34 3.9E-39 296.8 25.6 251 415-718 1-258 (258)
232 cd05114 PTKc_Tec_Rlk Catalytic 100.0 1.9E-34 4.1E-39 299.0 25.9 244 414-714 4-253 (256)
233 cd06626 STKc_MEKK4 Catalytic d 100.0 1.6E-34 3.5E-39 299.6 25.2 249 415-718 1-264 (264)
234 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 6.1E-35 1.3E-39 307.9 22.0 264 413-721 4-272 (284)
235 cd06658 STKc_PAK5 Catalytic do 100.0 3.3E-35 7.2E-40 312.2 20.0 252 414-720 22-277 (292)
236 cd06659 STKc_PAK6 Catalytic do 100.0 5.4E-35 1.2E-39 311.4 21.6 251 416-721 23-277 (297)
237 cd05061 PTKc_InsR Catalytic do 100.0 2.9E-34 6.2E-39 303.7 26.6 259 411-720 3-285 (288)
238 cd05106 PTKc_CSF-1R Catalytic 100.0 1.1E-34 2.3E-39 319.9 24.1 255 411-714 35-367 (374)
239 KOG2345 Serine/threonine prote 100.0 1.4E-35 3.1E-40 294.8 15.3 253 413-715 20-296 (302)
240 cd05606 STKc_beta_ARK Catalyti 100.0 1.7E-34 3.6E-39 304.3 24.4 245 421-720 1-260 (278)
241 cd05122 PKc_STE Catalytic doma 100.0 4E-34 8.7E-39 292.5 26.4 249 415-717 1-253 (253)
242 cd06641 STKc_MST3 Catalytic do 100.0 1.9E-34 4E-39 303.1 24.0 249 415-721 5-259 (277)
243 cd05048 PTKc_Ror Catalytic Dom 100.0 1.7E-34 3.6E-39 303.6 23.7 251 414-715 5-279 (283)
244 cd05072 PTKc_Lyn Catalytic dom 100.0 3.4E-34 7.3E-39 297.7 25.3 247 412-714 4-256 (261)
245 cd05104 PTKc_Kit Catalytic dom 100.0 1.3E-34 2.9E-39 319.2 23.3 254 413-715 34-370 (375)
246 cd05062 PTKc_IGF-1R Catalytic 100.0 3.5E-34 7.6E-39 300.8 25.4 255 410-715 2-274 (277)
247 cd08226 PK_STRAD_beta Pseudoki 100.0 1.1E-34 2.3E-39 313.2 22.1 289 420-720 4-313 (328)
248 cd06606 STKc_MAPKKK Catalytic 100.0 5.4E-34 1.2E-38 292.8 26.1 248 415-718 1-260 (260)
249 cd05577 STKc_GRK Catalytic dom 100.0 2E-34 4.4E-39 302.8 23.5 247 422-720 1-259 (277)
250 cd06633 STKc_TAO3 Catalytic do 100.0 4.7E-34 1E-38 306.5 26.7 251 414-720 21-278 (313)
251 cd06648 STKc_PAK_II Catalytic 100.0 3.6E-34 7.8E-39 302.9 25.5 250 415-720 20-274 (285)
252 cd05049 PTKc_Trk Catalytic dom 100.0 1.7E-34 3.7E-39 302.7 22.8 251 413-714 4-276 (280)
253 cd06618 PKc_MKK7 Catalytic dom 100.0 2.3E-34 5.1E-39 305.5 24.0 255 413-720 14-278 (296)
254 cd05036 PTKc_ALK_LTK Catalytic 100.0 4.3E-34 9.4E-39 300.3 25.7 254 413-715 5-274 (277)
255 cd06642 STKc_STK25-YSK1 Cataly 100.0 2.1E-35 4.5E-40 310.1 15.4 248 414-719 4-257 (277)
256 KOG0669 Cyclin T-dependent kin 100.0 7.6E-37 1.6E-41 303.7 4.2 282 413-720 16-320 (376)
257 cd06647 STKc_PAK_I Catalytic d 100.0 1.5E-34 3.4E-39 307.1 21.9 253 413-721 18-275 (293)
258 cd08228 STKc_Nek6 Catalytic do 100.0 6.8E-34 1.5E-38 296.1 26.1 250 414-715 2-261 (267)
259 cd06614 STKc_PAK Catalytic dom 100.0 3.1E-34 6.8E-39 302.6 23.8 256 412-721 17-276 (286)
260 cd06624 STKc_ASK Catalytic dom 100.0 6.1E-34 1.3E-38 297.2 25.5 248 419-718 13-268 (268)
261 cd05068 PTKc_Frk_like Catalyti 100.0 5.7E-34 1.2E-38 296.3 24.9 248 411-714 3-256 (261)
262 KOG4279 Serine/threonine prote 100.0 1.9E-35 4.2E-40 324.7 14.2 246 421-720 582-837 (1226)
263 cd05113 PTKc_Btk_Bmx Catalytic 100.0 6.2E-34 1.4E-38 295.9 25.0 245 414-715 4-254 (256)
264 cd06627 STKc_Cdc7_like Catalyt 100.0 1.1E-33 2.3E-38 291.1 26.5 247 415-718 1-254 (254)
265 cd05071 PTKc_Src Catalytic dom 100.0 6.6E-34 1.4E-38 296.8 25.1 246 412-714 4-255 (262)
266 cd05035 PTKc_Axl_like Catalyti 100.0 5.1E-34 1.1E-38 297.4 24.2 249 416-715 1-268 (273)
267 cd05067 PTKc_Lck_Blk Catalytic 100.0 7.1E-34 1.5E-38 295.4 25.0 248 410-714 2-255 (260)
268 cd05089 PTKc_Tie1 Catalytic do 100.0 7.7E-34 1.7E-38 301.9 25.7 252 414-715 2-271 (297)
269 cd05059 PTKc_Tec_like Catalyti 100.0 5.6E-34 1.2E-38 295.8 23.7 245 414-715 4-254 (256)
270 cd08222 STKc_Nek11 Catalytic d 100.0 1.8E-34 3.8E-39 299.7 19.9 250 415-718 1-260 (260)
271 cd05579 STKc_MAST_like Catalyt 100.0 3.5E-34 7.6E-39 296.2 21.8 244 422-721 1-263 (265)
272 cd05034 PTKc_Src_like Catalyti 100.0 1.4E-33 2.9E-38 292.9 26.3 248 411-714 3-256 (261)
273 cd08530 STKc_CNK2-like Catalyt 100.0 8.8E-34 1.9E-38 292.4 24.7 251 415-718 1-256 (256)
274 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 7.8E-34 1.7E-38 295.1 24.4 247 411-714 3-255 (260)
275 KOG0607 MAP kinase-interacting 100.0 4.5E-35 9.7E-40 299.3 14.5 256 414-720 77-366 (463)
276 cd05075 PTKc_Axl Catalytic dom 100.0 8.1E-34 1.8E-38 296.3 24.3 248 417-715 2-267 (272)
277 cd05090 PTKc_Ror1 Catalytic do 100.0 1.2E-33 2.5E-38 297.7 25.6 251 414-715 5-279 (283)
278 cd05039 PTKc_Csk_like Catalyti 100.0 1.4E-33 3.1E-38 292.1 25.7 245 413-714 5-251 (256)
279 cd06635 STKc_TAO1 Catalytic do 100.0 1.1E-33 2.4E-38 303.9 25.6 251 414-720 25-282 (317)
280 KOG0603 Ribosomal protein S6 k 100.0 6.6E-35 1.4E-39 322.8 16.4 248 412-721 320-570 (612)
281 KOG0665 Jun-N-terminal kinase 100.0 5.3E-35 1.1E-39 299.9 14.4 288 411-719 14-314 (369)
282 cd05088 PTKc_Tie2 Catalytic do 100.0 7.9E-34 1.7E-38 303.1 24.0 252 414-715 7-276 (303)
283 cd05148 PTKc_Srm_Brk Catalytic 100.0 4.6E-34 1E-38 296.4 21.6 246 413-714 5-256 (261)
284 cd05108 PTKc_EGFR Catalytic do 100.0 7.1E-34 1.5E-38 305.1 23.7 246 413-715 6-264 (316)
285 cd05084 PTKc_Fes Catalytic dom 100.0 8.5E-34 1.8E-38 293.2 23.4 239 420-714 1-248 (252)
286 cd05069 PTKc_Yes Catalytic dom 100.0 1.4E-33 3.1E-38 293.3 25.2 246 412-714 4-255 (260)
287 cd05098 PTKc_FGFR1 Catalytic d 100.0 1.5E-33 3.2E-38 301.2 25.9 256 410-715 14-295 (307)
288 KOG4721 Serine/threonine prote 100.0 3.7E-35 8E-40 317.3 13.5 234 419-716 129-365 (904)
289 cd06657 STKc_PAK4 Catalytic do 100.0 8.4E-34 1.8E-38 301.7 23.6 248 419-721 25-276 (292)
290 cd06634 STKc_TAO2 Catalytic do 100.0 6.8E-34 1.5E-38 304.3 22.8 251 414-720 15-272 (308)
291 KOG1026 Nerve growth factor re 100.0 1.1E-34 2.3E-39 330.2 17.5 250 413-713 485-756 (774)
292 cd05093 PTKc_TrkB Catalytic do 100.0 1.6E-33 3.5E-38 297.9 25.3 251 413-714 4-274 (288)
293 cd05053 PTKc_FGFR Catalytic do 100.0 1.7E-33 3.8E-38 297.7 25.2 255 411-715 9-287 (293)
294 cd05032 PTKc_InsR_like Catalyt 100.0 1.7E-33 3.7E-38 294.7 24.7 254 411-715 3-274 (277)
295 PHA02882 putative serine/threo 100.0 1.7E-33 3.6E-38 299.5 25.0 264 407-714 5-291 (294)
296 cd00192 PTKc Catalytic domain 100.0 1.5E-33 3.3E-38 290.5 23.8 245 420-715 1-260 (262)
297 KOG0983 Mitogen-activated prot 100.0 8.9E-35 1.9E-39 292.0 14.0 253 415-720 93-354 (391)
298 KOG0668 Casein kinase II, alph 100.0 4.2E-35 9E-40 287.9 11.3 293 402-719 28-326 (338)
299 cd05054 PTKc_VEGFR Catalytic d 100.0 6.2E-34 1.4E-38 309.3 21.7 255 412-715 5-329 (337)
300 KOG1151 Tousled-like protein k 100.0 2E-35 4.4E-40 311.5 9.5 260 410-719 459-745 (775)
301 cd05082 PTKc_Csk Catalytic dom 100.0 2.6E-33 5.6E-38 290.5 24.9 243 414-714 6-251 (256)
302 cd08229 STKc_Nek7 Catalytic do 100.0 9.5E-34 2.1E-38 295.0 21.6 249 414-714 2-260 (267)
303 cd06653 STKc_MEKK3_like_1 Cata 100.0 4.1E-33 8.8E-38 290.6 26.3 248 414-718 2-264 (264)
304 KOG0586 Serine/threonine prote 100.0 1.8E-34 3.8E-39 317.9 16.5 252 412-721 54-312 (596)
305 cd05123 STKc_AGC Catalytic dom 100.0 1.7E-33 3.6E-38 289.7 22.8 239 422-718 1-250 (250)
306 cd05033 PTKc_EphR Catalytic do 100.0 2.4E-33 5.2E-38 292.4 24.1 247 413-715 3-261 (266)
307 cd05613 STKc_MSK1_N N-terminal 100.0 2.9E-33 6.4E-38 295.7 24.9 253 415-720 1-273 (290)
308 KOG0193 Serine/threonine prote 100.0 1.9E-34 4.1E-39 316.0 15.9 253 406-714 384-648 (678)
309 cd05112 PTKc_Itk Catalytic dom 100.0 5.3E-33 1.1E-37 287.6 26.1 245 414-715 4-254 (256)
310 cd05051 PTKc_DDR Catalytic dom 100.0 3.2E-33 7E-38 295.7 25.0 258 413-714 4-292 (296)
311 KOG0584 Serine/threonine prote 100.0 1.6E-34 3.5E-39 318.5 15.4 250 414-720 39-301 (632)
312 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 6.3E-33 1.4E-37 288.2 26.6 249 414-714 2-260 (267)
313 KOG0612 Rho-associated, coiled 100.0 3.5E-35 7.7E-40 338.8 10.6 254 412-720 73-343 (1317)
314 cd08216 PK_STRAD Pseudokinase 100.0 2.3E-33 5.1E-38 299.9 23.7 273 426-720 12-300 (314)
315 cd05109 PTKc_HER2 Catalytic do 100.0 4.7E-33 1E-37 292.5 25.5 246 413-715 6-264 (279)
316 PRK13184 pknD serine/threonine 100.0 3.2E-33 6.9E-38 330.4 26.9 252 414-714 2-284 (932)
317 cd05099 PTKc_FGFR4 Catalytic d 100.0 6E-33 1.3E-37 297.6 26.7 253 412-714 10-288 (314)
318 cd05055 PTKc_PDGFR Catalytic d 100.0 3.8E-33 8.2E-38 297.9 25.0 251 411-714 32-296 (302)
319 cd05100 PTKc_FGFR3 Catalytic d 100.0 4.2E-33 9E-38 301.6 25.6 256 410-715 8-289 (334)
320 KOG0986 G protein-coupled rece 100.0 1.7E-34 3.6E-39 306.6 14.2 253 413-720 184-451 (591)
321 cd05073 PTKc_Hck Catalytic dom 100.0 4.8E-33 1E-37 289.4 25.0 248 410-714 2-255 (260)
322 PF07714 Pkinase_Tyr: Protein 100.0 1.9E-33 4.1E-38 293.4 22.0 243 417-714 2-257 (259)
323 cd05091 PTKc_Ror2 Catalytic do 100.0 1.5E-33 3.2E-38 296.7 21.2 251 414-715 5-279 (283)
324 cd05101 PTKc_FGFR2 Catalytic d 100.0 5.8E-33 1.3E-37 296.0 25.6 256 410-715 11-292 (304)
325 cd05045 PTKc_RET Catalytic dom 100.0 6E-33 1.3E-37 293.6 25.4 249 415-714 1-281 (290)
326 cd05063 PTKc_EphR_A2 Catalytic 100.0 8.2E-33 1.8E-37 288.4 26.0 246 413-714 4-262 (268)
327 cd05050 PTKc_Musk Catalytic do 100.0 4.7E-33 1E-37 293.9 24.3 251 413-714 4-284 (288)
328 cd05105 PTKc_PDGFR_alpha Catal 100.0 4.5E-33 9.8E-38 309.6 25.1 253 413-714 36-392 (400)
329 cd05066 PTKc_EphR_A Catalytic 100.0 7.3E-33 1.6E-37 289.2 25.2 246 413-714 3-261 (267)
330 cd05083 PTKc_Chk Catalytic dom 100.0 5.8E-33 1.3E-37 287.5 24.1 243 414-715 6-250 (254)
331 cd05094 PTKc_TrkC Catalytic do 100.0 7.8E-33 1.7E-37 293.1 25.4 250 414-714 5-277 (291)
332 cd05065 PTKc_EphR_B Catalytic 100.0 5.8E-33 1.2E-37 290.0 24.0 246 414-715 4-264 (269)
333 cd05610 STKc_MASTL Catalytic d 100.0 7E-33 1.5E-37 326.7 27.4 144 414-571 4-152 (669)
334 cd05116 PTKc_Syk Catalytic dom 100.0 7.4E-33 1.6E-37 287.5 24.2 237 421-715 2-251 (257)
335 cd05097 PTKc_DDR_like Catalyti 100.0 4.6E-33 1E-37 295.4 23.1 258 413-714 4-291 (295)
336 cd05103 PTKc_VEGFR2 Catalytic 100.0 3.2E-33 6.9E-38 304.1 22.1 255 412-715 5-335 (343)
337 cd05583 STKc_MSK_N N-terminal 100.0 8.9E-33 1.9E-37 291.8 24.7 254 415-721 1-272 (288)
338 cd05095 PTKc_DDR2 Catalytic do 100.0 9.8E-33 2.1E-37 293.1 24.9 258 413-714 4-292 (296)
339 smart00219 TyrKc Tyrosine kina 100.0 1.1E-32 2.5E-37 284.2 24.6 244 416-714 1-256 (258)
340 cd05060 PTKc_Syk_like Catalyti 100.0 1.1E-32 2.4E-37 286.0 24.1 237 420-714 1-250 (257)
341 cd05047 PTKc_Tie Catalytic dom 100.0 1.2E-32 2.7E-37 288.2 24.3 245 421-715 2-264 (270)
342 cd05092 PTKc_TrkA Catalytic do 100.0 1.3E-32 2.7E-37 289.9 24.3 251 413-714 4-276 (280)
343 cd05111 PTK_HER3 Pseudokinase 100.0 1.4E-32 3.1E-37 289.6 24.3 245 413-714 6-263 (279)
344 cd05040 PTKc_Ack_like Catalyti 100.0 2E-32 4.3E-37 283.4 24.3 240 420-714 1-253 (257)
345 cd05576 STKc_RPK118_like Catal 100.0 3.3E-33 7.2E-38 287.5 18.3 228 425-718 4-237 (237)
346 KOG1187 Serine/threonine prote 100.0 4.1E-33 8.8E-38 304.7 19.9 197 414-623 75-281 (361)
347 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 1.2E-32 2.7E-37 289.9 22.9 258 413-714 2-276 (283)
348 cd05056 PTKc_FAK Catalytic dom 100.0 2.5E-32 5.4E-37 285.4 24.8 247 412-715 4-261 (270)
349 cd05107 PTKc_PDGFR_beta Cataly 100.0 2.1E-32 4.5E-37 304.3 25.0 255 412-715 35-395 (401)
350 cd05041 PTKc_Fes_like Catalyti 100.0 2E-32 4.3E-37 282.5 23.1 238 420-714 1-247 (251)
351 cd05046 PTK_CCK4 Pseudokinase 100.0 2.4E-32 5.2E-37 286.0 23.5 252 414-715 5-272 (275)
352 cd08528 STKc_Nek10 Catalytic d 100.0 2.4E-32 5.1E-37 285.1 23.4 250 415-715 1-266 (269)
353 cd05044 PTKc_c-ros Catalytic d 100.0 1.5E-32 3.3E-37 286.3 21.9 245 421-714 2-265 (269)
354 cd05057 PTKc_EGFR_like Catalyt 100.0 4.4E-32 9.5E-37 285.2 25.6 245 413-714 6-263 (279)
355 cd05115 PTKc_Zap-70 Catalytic 100.0 4.1E-32 9E-37 282.6 24.8 238 421-715 2-251 (257)
356 cd05043 PTK_Ryk Pseudokinase d 100.0 4.2E-32 9E-37 285.2 25.1 252 412-714 4-271 (280)
357 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 3.1E-32 6.8E-37 284.5 23.6 240 420-715 1-260 (262)
358 cd05042 PTKc_Aatyk Catalytic d 100.0 4.3E-32 9.3E-37 283.4 24.2 247 421-715 2-266 (269)
359 KOG0194 Protein tyrosine kinas 100.0 7.1E-33 1.5E-37 306.3 18.9 252 408-714 151-415 (474)
360 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 3.2E-32 6.9E-37 281.7 22.3 237 420-714 1-256 (259)
361 KOG4645 MAPKKK (MAP kinase kin 100.0 2E-34 4.3E-39 336.3 6.1 251 412-719 1233-1498(1509)
362 cd05085 PTKc_Fer Catalytic dom 100.0 7.9E-32 1.7E-36 277.8 24.8 239 420-715 1-247 (250)
363 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 7.5E-32 1.6E-36 283.9 25.1 262 414-715 4-279 (284)
364 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 5.1E-32 1.1E-36 285.0 23.6 239 421-715 2-272 (274)
365 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 1.3E-32 2.8E-37 286.1 18.5 239 420-715 1-256 (258)
366 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 9.7E-32 2.1E-36 281.0 24.4 246 421-714 2-265 (269)
367 cd05074 PTKc_Tyro3 Catalytic d 100.0 7E-32 1.5E-36 281.9 23.1 249 416-715 1-268 (273)
368 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 3.1E-32 6.7E-37 287.3 20.6 260 415-715 5-279 (284)
369 cd05058 PTKc_Met_Ron Catalytic 100.0 9.7E-32 2.1E-36 279.1 23.7 240 420-715 1-255 (262)
370 cd05110 PTKc_HER4 Catalytic do 100.0 1E-31 2.3E-36 286.6 24.3 246 413-715 6-264 (303)
371 PLN03225 Serine/threonine-prot 100.0 5.9E-32 1.3E-36 312.2 23.7 274 413-720 131-455 (566)
372 KOG1035 eIF-2alpha kinase GCN2 100.0 8E-33 1.7E-37 321.7 15.7 253 412-719 477-875 (1351)
373 KOG0664 Nemo-like MAPK-related 100.0 6.9E-34 1.5E-38 285.0 5.4 272 420-720 59-348 (449)
374 KOG1095 Protein tyrosine kinas 100.0 6.9E-32 1.5E-36 317.1 22.0 251 413-714 691-956 (1025)
375 KOG1006 Mitogen-activated prot 100.0 9.6E-34 2.1E-38 283.7 5.5 264 410-719 60-331 (361)
376 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 1.1E-31 2.3E-36 281.5 21.0 260 414-714 4-278 (284)
377 KOG0695 Serine/threonine prote 100.0 1.7E-32 3.8E-37 281.2 14.5 255 411-720 247-521 (593)
378 KOG0587 Traf2- and Nck-interac 100.0 6.4E-32 1.4E-36 306.0 19.5 256 413-720 18-287 (953)
379 KOG0614 cGMP-dependent protein 100.0 2.4E-33 5.3E-38 300.5 6.4 252 413-720 419-682 (732)
380 cd05086 PTKc_Aatyk2 Catalytic 100.0 5.9E-31 1.3E-35 275.4 24.0 245 421-714 2-264 (268)
381 KOG4278 Protein tyrosine kinas 100.0 1.1E-31 2.3E-36 292.2 17.6 246 413-713 266-517 (1157)
382 KOG4250 TANK binding protein k 100.0 2.4E-32 5.1E-37 304.6 12.5 206 408-622 7-226 (732)
383 KOG1167 Serine/threonine prote 100.0 5.5E-32 1.2E-36 286.9 11.8 293 411-720 33-386 (418)
384 KOG0608 Warts/lats-like serine 100.0 2.2E-31 4.7E-36 290.9 15.4 253 413-720 628-933 (1034)
385 smart00220 S_TKc Serine/Threon 100.0 3.1E-30 6.7E-35 261.5 21.5 238 426-718 1-244 (244)
386 KOG0196 Tyrosine kinase, EPH ( 100.0 2E-31 4.4E-36 297.9 13.7 247 413-715 628-887 (996)
387 KOG4257 Focal adhesion tyrosin 100.0 6.9E-31 1.5E-35 286.8 14.9 241 416-713 391-643 (974)
388 KOG0199 ACK and related non-re 100.0 3.5E-31 7.5E-36 292.4 12.7 247 414-716 110-369 (1039)
389 PLN03224 probable serine/threo 100.0 8.2E-30 1.8E-34 288.6 23.4 276 413-722 144-507 (507)
390 KOG1027 Serine/threonine prote 100.0 2.3E-31 4.9E-36 300.4 10.6 245 420-718 515-770 (903)
391 KOG1094 Discoidin domain recep 100.0 1.7E-30 3.8E-35 282.6 16.8 255 412-715 536-800 (807)
392 KOG2052 Activin A type IB rece 100.0 6.2E-29 1.3E-33 264.5 16.2 260 400-712 197-496 (513)
393 KOG0984 Mitogen-activated prot 100.0 4.1E-29 8.8E-34 242.7 12.8 213 414-635 46-268 (282)
394 PLN00113 leucine-rich repeat r 100.0 1.4E-28 3E-33 302.4 19.6 186 414-621 690-879 (968)
395 KOG3653 Transforming growth fa 100.0 4.3E-29 9.4E-34 267.3 12.0 261 414-711 210-495 (534)
396 KOG1152 Signal transduction se 100.0 4.5E-29 9.8E-34 271.5 11.5 198 414-622 561-771 (772)
397 KOG0200 Fibroblast/platelet-de 100.0 1.6E-27 3.6E-32 277.7 23.1 254 411-714 293-574 (609)
398 KOG0576 Mitogen-activated prot 99.9 2.1E-28 4.6E-33 270.1 5.8 255 413-720 14-276 (829)
399 cd00180 PKc Catalytic domain o 99.9 5.9E-26 1.3E-30 223.7 22.6 208 422-716 1-215 (215)
400 KOG1025 Epidermal growth facto 99.9 1.9E-27 4.1E-32 266.8 12.6 242 416-714 698-952 (1177)
401 KOG1345 Serine/threonine kinas 99.9 3.1E-28 6.7E-33 244.8 5.6 259 412-718 22-290 (378)
402 smart00221 STYKc Protein kinas 99.9 4E-25 8.6E-30 222.5 20.8 205 416-633 1-215 (225)
403 PLN00181 protein SPA1-RELATED; 99.9 1.1E-26 2.3E-31 279.8 10.8 194 477-720 34-270 (793)
404 KOG1165 Casein kinase (serine/ 99.9 4.4E-25 9.6E-30 227.6 15.8 226 411-647 25-266 (449)
405 KOG1163 Casein kinase (serine/ 99.9 1.4E-24 3.1E-29 215.4 15.3 226 411-647 12-251 (341)
406 KOG1024 Receptor-like protein 99.9 6.6E-24 1.4E-28 222.5 16.0 252 412-714 282-550 (563)
407 KOG1164 Casein kinase (serine/ 99.9 4.9E-23 1.1E-27 222.7 23.2 204 415-624 19-241 (322)
408 smart00750 KIND kinase non-cat 99.9 3.2E-24 7E-29 210.0 12.6 168 500-719 1-169 (176)
409 KOG0590 Checkpoint kinase and 99.9 1.3E-23 2.8E-28 242.9 5.7 263 414-721 317-591 (601)
410 COG0515 SPS1 Serine/threonine 99.9 1.1E-20 2.4E-25 196.3 24.9 257 416-720 2-280 (384)
411 cd08677 C2A_Synaptotagmin-13 C 99.9 2.7E-22 5.9E-27 183.3 6.0 93 264-362 12-106 (118)
412 PRK09188 serine/threonine prot 99.9 5.4E-21 1.2E-25 208.6 14.8 166 405-594 9-194 (365)
413 PF14531 Kinase-like: Kinase-l 99.8 7.6E-20 1.6E-24 192.2 17.0 206 416-623 14-253 (288)
414 cd08692 C2B_Tac2-N C2 domain s 99.8 2.2E-21 4.7E-26 181.6 4.6 107 264-372 12-120 (135)
415 cd08407 C2B_Synaptotagmin-13 C 99.8 4.7E-21 1E-25 181.3 4.2 106 264-372 13-122 (138)
416 KOG0603 Ribosomal protein S6 k 99.8 4.4E-21 9.4E-26 213.4 3.6 236 421-720 1-248 (612)
417 KOG0606 Microtubule-associated 99.8 3.6E-20 7.8E-25 214.7 10.6 219 412-720 81-320 (1205)
418 PRK10359 lipopolysaccharide co 99.8 6.8E-20 1.5E-24 187.2 10.9 177 404-614 21-216 (232)
419 KOG1240 Protein kinase contain 99.8 2.4E-20 5.3E-25 216.0 7.5 244 415-715 24-291 (1431)
420 cd08406 C2B_Synaptotagmin-12 C 99.8 2.1E-20 4.5E-25 176.8 3.8 104 264-370 13-118 (136)
421 cd08680 C2_Kibra C2 domain fou 99.8 7E-20 1.5E-24 170.4 5.9 98 264-363 12-112 (124)
422 KOG0195 Integrin-linked kinase 99.8 7E-20 1.5E-24 184.6 6.1 242 414-713 190-440 (448)
423 cd05147 RIO1_euk RIO kinase fa 99.8 6.2E-19 1.3E-23 176.5 11.6 139 419-574 2-168 (190)
424 KOG1166 Mitotic checkpoint ser 99.8 1.8E-18 3.9E-23 204.6 12.5 202 405-618 689-901 (974)
425 cd04028 C2B_RIM1alpha C2 domai 99.8 5.6E-19 1.2E-23 168.5 6.6 96 264-363 27-125 (146)
426 KOG4158 BRPK/PTEN-induced prot 99.8 2.4E-18 5.2E-23 181.4 11.3 189 473-710 273-505 (598)
427 cd05145 RIO1_like RIO kinase f 99.8 8.9E-18 1.9E-22 168.0 14.6 140 419-575 2-169 (190)
428 cd08392 C2A_SLP-3 C2 domain fi 99.8 7E-19 1.5E-23 164.8 5.8 99 264-364 13-114 (128)
429 PRK12274 serine/threonine prot 99.7 2.3E-17 5.1E-22 165.6 16.2 182 417-623 5-210 (218)
430 cd08381 C2B_PI3K_class_II C2 d 99.7 1E-18 2.3E-23 162.3 5.9 97 265-364 12-111 (122)
431 cd08685 C2_RGS-like C2 domain 99.7 1.7E-18 3.6E-23 160.2 5.4 97 264-363 10-108 (119)
432 cd08393 C2A_SLP-1_2 C2 domain 99.7 2.1E-18 4.5E-23 161.0 5.9 99 264-364 13-114 (125)
433 cd08408 C2B_Synaptotagmin-14_1 99.7 9.9E-19 2.2E-23 165.9 3.3 105 264-370 13-120 (138)
434 cd04029 C2A_SLP-4_5 C2 domain 99.7 8.2E-18 1.8E-22 157.0 6.1 99 264-364 13-114 (125)
435 PRK10345 hypothetical protein; 99.7 1.2E-16 2.6E-21 162.2 15.0 139 419-570 7-156 (210)
436 smart00090 RIO RIO-like kinase 99.7 1.3E-16 2.9E-21 165.1 11.8 144 416-575 30-200 (237)
437 cd08395 C2C_Munc13 C2 domain t 99.7 3E-17 6.5E-22 151.7 5.9 97 267-366 1-102 (120)
438 cd08409 C2B_Synaptotagmin-15 C 99.7 1.9E-17 4.2E-22 157.0 2.9 106 264-372 13-121 (137)
439 cd08410 C2B_Synaptotagmin-17 C 99.7 4.4E-17 9.6E-22 154.1 3.5 99 264-364 12-112 (135)
440 cd08384 C2B_Rabphilin_Doc2 C2 99.6 1E-16 2.2E-21 151.0 4.8 96 264-361 11-108 (133)
441 cd08404 C2B_Synaptotagmin-4 C2 99.6 9.7E-17 2.1E-21 151.9 4.5 103 264-369 13-117 (136)
442 KOG1028 Ca2+-dependent phospho 99.6 1.8E-16 4E-21 176.2 5.8 97 264-364 165-263 (421)
443 cd04020 C2B_SLP_1-2-3-4 C2 dom 99.6 4E-16 8.7E-21 152.1 6.7 118 264-385 25-144 (162)
444 cd08403 C2B_Synaptotagmin-3-5- 99.6 2.7E-16 5.8E-21 148.4 3.7 95 264-360 12-108 (134)
445 cd08402 C2B_Synaptotagmin-1 C2 99.6 2.7E-16 5.8E-21 148.8 3.6 103 264-369 13-117 (136)
446 cd08388 C2A_Synaptotagmin-4-11 99.6 6.5E-16 1.4E-20 144.8 6.1 98 264-364 14-114 (128)
447 cd08521 C2A_SLP C2 domain firs 99.6 7.3E-16 1.6E-20 142.9 6.1 98 264-363 12-112 (123)
448 cd08387 C2A_Synaptotagmin-8 C2 99.6 6.6E-16 1.4E-20 143.7 5.8 97 264-364 14-112 (124)
449 cd08389 C2A_Synaptotagmin-14_1 99.6 7.9E-16 1.7E-20 143.4 5.9 98 264-365 14-113 (124)
450 cd04010 C2B_RasA3 C2 domain se 99.6 1.1E-15 2.4E-20 146.6 6.3 97 267-365 1-110 (148)
451 cd04030 C2C_KIAA1228 C2 domain 99.6 1.1E-15 2.4E-20 142.6 6.0 99 264-364 14-116 (127)
452 cd04031 C2A_RIM1alpha C2 domai 99.6 1.4E-15 3E-20 141.4 6.6 98 264-362 14-113 (125)
453 cd08405 C2B_Synaptotagmin-7 C2 99.6 5.7E-16 1.2E-20 146.6 4.0 97 264-362 13-111 (136)
454 cd08385 C2A_Synaptotagmin-1-5- 99.6 1.2E-15 2.6E-20 141.9 6.0 97 264-364 14-112 (124)
455 PRK14879 serine/threonine prot 99.6 1.8E-14 3.9E-19 145.6 14.8 132 420-572 2-143 (211)
456 KOG1033 eIF-2alpha kinase PEK/ 99.6 9.4E-16 2E-20 168.3 5.8 177 489-719 329-516 (516)
457 KOG1028 Ca2+-dependent phospho 99.6 6E-16 1.3E-20 172.1 3.7 96 264-361 296-393 (421)
458 cd05144 RIO2_C RIO kinase fami 99.6 1.9E-14 4.1E-19 144.6 12.9 138 416-575 17-177 (198)
459 cd04041 C2A_fungal C2 domain f 99.5 5.1E-15 1.1E-19 135.2 6.3 95 266-364 1-99 (111)
460 TIGR03724 arch_bud32 Kae1-asso 99.5 6.3E-14 1.4E-18 140.4 13.9 128 421-572 1-138 (199)
461 cd05119 RIO RIO kinase family, 99.5 4.7E-14 1E-18 139.8 12.1 139 419-575 2-166 (187)
462 cd08386 C2A_Synaptotagmin-7 C2 99.5 9.8E-15 2.1E-19 135.8 6.4 98 264-364 14-113 (125)
463 cd04009 C2B_Munc13-like C2 dom 99.5 1E-14 2.2E-19 137.6 5.7 99 264-364 14-118 (133)
464 KOG1023 Natriuretic peptide re 99.5 4.7E-14 1E-18 157.4 11.8 197 473-713 4-218 (484)
465 cd04039 C2_PSD C2 domain prese 99.5 1.2E-14 2.6E-19 132.1 5.9 92 266-364 1-97 (108)
466 cd08682 C2_Rab11-FIP_classI C2 99.5 9.4E-15 2E-19 136.4 5.0 89 268-363 1-94 (126)
467 cd08688 C2_KIAA0528-like C2 do 99.5 1.1E-14 2.3E-19 132.8 4.9 90 268-364 1-94 (110)
468 PRK09605 bifunctional UGMP fam 99.5 1.1E-13 2.5E-18 159.9 14.4 135 413-572 332-476 (535)
469 cd08401 C2A_RasA2_RasA3 C2 dom 99.5 2E-14 4.4E-19 133.4 5.7 89 268-364 2-92 (121)
470 cd04032 C2_Perforin C2 domain 99.5 5.4E-14 1.2E-18 131.4 7.2 91 264-362 26-117 (127)
471 cd08390 C2A_Synaptotagmin-15-1 99.5 3.6E-14 7.8E-19 131.6 5.7 98 264-365 12-112 (123)
472 cd05120 APH_ChoK_like Aminogly 99.5 4.3E-13 9.4E-18 125.8 12.8 134 418-572 2-138 (155)
473 cd08376 C2B_MCTP_PRT C2 domain 99.5 4.9E-14 1.1E-18 129.4 5.0 89 268-364 2-91 (116)
474 cd04036 C2_cPLA2 C2 domain pre 99.4 5.8E-14 1.3E-18 129.7 5.0 91 268-364 2-93 (119)
475 cd04018 C2C_Ferlin C2 domain t 99.4 6.7E-14 1.5E-18 134.5 5.1 94 267-367 1-109 (151)
476 cd04025 C2B_RasA1_RasA4 C2 dom 99.4 1E-13 2.2E-18 128.8 5.8 90 267-364 1-91 (123)
477 cd00276 C2B_Synaptotagmin C2 d 99.4 6.8E-14 1.5E-18 131.4 4.1 103 264-369 12-116 (134)
478 cd04016 C2_Tollip C2 domain pr 99.4 1.5E-13 3.3E-18 127.3 6.3 85 266-360 2-88 (121)
479 KOG0590 Checkpoint kinase and 99.4 1.4E-14 3E-19 168.2 -1.2 258 413-720 19-291 (601)
480 cd04022 C2A_MCTP_PRT_plant C2 99.4 1.2E-13 2.6E-18 129.2 5.3 90 267-363 1-94 (127)
481 cd08690 C2_Freud-1 C2 domain f 99.4 1.7E-13 3.7E-18 131.9 6.4 94 269-364 5-109 (155)
482 cd08686 C2_ABR C2 domain in th 99.4 1.5E-13 3.2E-18 125.6 5.4 80 268-357 1-88 (118)
483 cd04035 C2A_Rabphilin_Doc2 C2 99.4 1.9E-13 4.1E-18 127.0 6.2 100 264-365 13-114 (123)
484 cd04026 C2_PKC_alpha_gamma C2 99.4 1.7E-13 3.6E-18 128.7 5.9 115 264-384 11-126 (131)
485 PRK01723 3-deoxy-D-manno-octul 99.4 3.1E-12 6.8E-17 132.7 15.7 133 421-572 38-191 (239)
486 cd04042 C2A_MCTP_PRT C2 domain 99.4 1.9E-13 4.2E-18 126.6 5.7 89 267-363 1-90 (121)
487 cd08379 C2D_MCTP_PRT_plant C2 99.4 2E-13 4.4E-18 127.3 5.2 87 268-363 2-98 (126)
488 cd04019 C2C_MCTP_PRT_plant C2 99.4 2.1E-13 4.6E-18 131.2 5.5 90 267-364 1-92 (150)
489 cd04033 C2_NEDD4_NEDD4L C2 dom 99.4 3.2E-13 7E-18 127.0 6.3 95 267-365 1-98 (133)
490 KOG1030 Predicted Ca2+-depende 99.4 4.1E-13 8.8E-18 128.0 6.1 86 265-359 5-91 (168)
491 cd08676 C2A_Munc13-like C2 dom 99.4 3.6E-13 7.7E-18 129.7 5.7 99 264-369 26-149 (153)
492 cd08374 C2F_Ferlin C2 domain s 99.4 3.5E-13 7.6E-18 126.3 5.4 90 268-361 2-120 (133)
493 cd08375 C2_Intersectin C2 doma 99.4 4.7E-13 1E-17 126.8 6.0 93 264-364 13-106 (136)
494 cd04043 C2_Munc13_fungal C2 do 99.4 4.6E-13 1E-17 124.7 5.7 91 267-362 2-93 (126)
495 cd04037 C2E_Ferlin C2 domain f 99.4 7.3E-13 1.6E-17 123.4 6.1 87 268-360 2-89 (124)
496 cd04024 C2A_Synaptotagmin-like 99.4 7.1E-13 1.5E-17 123.6 5.6 90 266-363 1-93 (128)
497 cd04017 C2D_Ferlin C2 domain f 99.3 1.1E-12 2.3E-17 124.1 6.5 86 267-357 2-94 (135)
498 cd08681 C2_fungal_Inn1p-like C 99.3 9.2E-13 2E-17 121.3 5.7 90 266-364 1-92 (118)
499 cd04054 C2A_Rasal1_RasA4 C2 do 99.3 9.7E-13 2.1E-17 122.0 5.8 87 268-362 2-89 (121)
500 cd04011 C2B_Ferlin C2 domain s 99.3 1E-12 2.2E-17 119.9 5.3 90 267-365 5-96 (111)
No 1
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3e-71 Score=577.79 Aligned_cols=425 Identities=22% Similarity=0.294 Sum_probs=346.9
Q ss_pred CCCccccccccCCCCCcccccceeeccccCCCccCCccccccccccccCCCCCccccCCCCccccceeEEEEeec-CCcc
Q 004954 201 LDKPCLFHIVPLNDDKEVGVTDYYRFEKTNQPEAGGIKEKLKDCAAYGCSEPLCKCCAGEGKINNDYGYLSSKEA-DLID 279 (722)
Q Consensus 201 ~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~v~l~e~-~L~~ 279 (722)
++++|+.||||+||.++|+++ |++...++. ..+.|+|.|+|| ||.|
T Consensus 148 VH~rCv~nVPslCG~DhtE~R-------------Grl~l~~~~--------------------~~~~l~v~i~ea~NLiP 194 (683)
T KOG0696|consen 148 VHHRCVENVPSLCGTDHTERR-------------GRLYLEAHI--------------------KRDVLTVTIKEAKNLIP 194 (683)
T ss_pred HHHHHhhcCCcccCCcchhhc-------------ceEEEEEEe--------------------cCceEEEEehhhccccc
Confidence 458999999999999665555 555544444 558999999999 9999
Q ss_pred ccCCCCCCcceEEEecCCCCCcccceeeecccCCCcceeeeeecccccccCcccccccccccccCCCCCCccccccccCc
Q 004954 280 LQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAEKDLMPAEIDNSDTRDGEVNGALHEGK 359 (722)
Q Consensus 280 ~d~~g~sDpyvk~~l~~d~~~~~k~kt~~~k~tlnP~~nE~f~f~~~v~~~~~~~~L~~~V~D~D~~~~~d~iG~v~~~~ 359 (722)
||.||+||||||+.|+||.+.+.|+||+++|+||||+|||+|+|+ +...+.+++|.++||||||.++|||+|.+++++
T Consensus 195 MDpNGlSDPYvk~kliPD~~~~sKqKTkTik~~LNP~wNEtftf~--Lkp~DkdrRlsiEvWDWDrTsRNDFMGslSFgi 272 (683)
T KOG0696|consen 195 MDPNGLSDPYVKLKLIPDPKNESKQKTKTIKATLNPVWNETFTFK--LKPSDKDRRLSIEVWDWDRTSRNDFMGSLSFGI 272 (683)
T ss_pred cCCCCCCCcceeEEeccCCcchhhhhhhhhhhhcCccccceeEEe--cccccccceeEEEEecccccccccccceecccH
Confidence 999999999999999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred cccccccCCCcchhhhhhhHhHhhhheeee--------------eeccccCCccCCC-----------Ccce-eeCceec
Q 004954 360 ADAEEHGVATPDLLMFDNLEEECEIFHLRI--------------IHRKNRTGFEENK-----------DLPI-ILNTVIA 413 (722)
Q Consensus 360 ~~~~~e~~~~~~~l~f~~L~ee~~~~~lr~--------------i~~~~~~~~~~~~-----------~~pi-~~~~~l~ 413 (722)
.++.+++..+ |++.|.+++.++..-. .-++.+.+..+.+ .+.. ....+-.
T Consensus 273 sEl~K~p~~G----WyKlLsqeEGEyyNvp~~~~~~e~~~~lr~k~~~~~~~~~~s~p~~~~~~~~~~~~~~~~~d~i~~ 348 (683)
T KOG0696|consen 273 SELQKAPVDG----WYKLLSQEEGEYYNVPVPDEDSEDNEELRQKFERARIGPGSSKPEKKTMPTDSKFHNSSKRDRIKA 348 (683)
T ss_pred HHHhhcchhh----HHHHhhhhcCceeccCCCCchhhHHHHHHHHHhhcccCCCcCCCCCCCCCCcccCCCCCcccceee
Confidence 9999999999 7777777765542211 1111111110000 0000 0112335
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~----~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (722)
.+|..+.+||+|+||+|.++..+.+.+.+|||+++++. +..+-.+.|.++|..... .|.++++..+|++.+
T Consensus 349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~k-----ppFL~qlHScFQTmD 423 (683)
T KOG0696|consen 349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGK-----PPFLVQLHSCFQTMD 423 (683)
T ss_pred cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCC-----CchHHHHHHHhhhhh
Confidence 67999999999999999999999999999999998753 233445567777665543 479999999999999
Q ss_pred eEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCC
Q 004954 490 HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS 569 (722)
Q Consensus 490 ~l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGl 569 (722)
.+|+||||+.|+-+-+....-. .+.+..+..++..|+-||-|||++|||+||||.+|||++. +|.|||+|||+
T Consensus 424 RLyFVMEyvnGGDLMyhiQQ~G-----kFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~--eGHiKi~DFGm 496 (683)
T KOG0696|consen 424 RLYFVMEYVNGGDLMYHIQQVG-----KFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDS--EGHIKIADFGM 496 (683)
T ss_pred heeeEEEEecCchhhhHHHHhc-----ccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEecc--CCceEeeeccc
Confidence 9999999999875555443222 1788889999999999999999999999999999999996 89999999999
Q ss_pred cccc---cCCccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhh
Q 004954 570 SCFQ---TDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQ 646 (722)
Q Consensus 570 s~~~---~~~~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~ 646 (722)
++.. .....+++|||.|+|||++..++|+..+|+||+||+|||||.|++||.+.+..++++.|+..--..|
T Consensus 497 cKEni~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnvsyP------ 570 (683)
T KOG0696|consen 497 CKENIFDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNVSYP------ 570 (683)
T ss_pred ccccccCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccCcCc------
Confidence 8642 3345568999999999999999999999999999999999999999999999999998873221111
Q ss_pred hhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcC-----HHHHHhCCCCCC
Q 004954 647 GQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPT-----AREALDHPWLQH 720 (722)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpT-----a~ElL~HPwf~~ 720 (722)
+..+.+.+++.+.+|...|.+|.. -.++-.||||+.
T Consensus 571 --------------------------------------KslSkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~ 611 (683)
T KOG0696|consen 571 --------------------------------------KSLSKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRR 611 (683)
T ss_pred --------------------------------------ccccHHHHHHHHHHhhcCCccccCCCCccccchhhCcchhh
Confidence 122356789999999999999974 468889999975
No 2
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=3.8e-55 Score=485.32 Aligned_cols=319 Identities=49% Similarity=0.763 Sum_probs=289.4
Q ss_pred CccCCCCcceeeCceecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCC
Q 004954 397 GFEENKDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEH 476 (722)
Q Consensus 397 ~~~~~~~~pi~~~~~l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~~~~~~~~E~~il~~L~~~~~~~hp 476 (722)
.+...+++.++.++.+..||.|+++||+|+||.|.+|.|..|++.||||++++.+....+...|+++|..|+.....+..
T Consensus 169 ~~~~~~dY~~v~~d~i~~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~ 248 (586)
T KOG0667|consen 169 FDDEDGDYQLVVNDHIAYRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKY 248 (586)
T ss_pred CCCCCCceeEEecceeEEEEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCe
Confidence 45567788999999999999999999999999999999999999999999999999999999999999999976667778
Q ss_pred ceeEEEEEEEecCeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcc
Q 004954 477 HILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKS 556 (722)
Q Consensus 477 nIv~l~~~f~~~~~l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~ 556 (722)
|||+++++|...+|+|||+|.+..+|+++++.++..+ +++..++.|+.||+.||.+||+.||||+||||+||||..
T Consensus 249 n~Vrm~d~F~fr~HlciVfELL~~NLYellK~n~f~G----lsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~ 324 (586)
T KOG0667|consen 249 NIVRMLDYFYFRNHLCIVFELLSTNLYELLKNNKFRG----LSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKD 324 (586)
T ss_pred eEEEeeeccccccceeeeehhhhhhHHHHHHhcCCCC----CCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeecc
Confidence 9999999999999999999999999999999887765 999999999999999999999999999999999999998
Q ss_pred cCCCeEEEEecCCcccccCCccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhc
Q 004954 557 YQRCEIKIIDLGSSCFQTDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGML 636 (722)
Q Consensus 557 ~~~~~vkL~DFGls~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~l 636 (722)
.....|||+|||+|++.....+.+++++.|+|||+++|.+|+.++||||||||+.||++|.+.|++.+..+++..|++.+
T Consensus 325 ~~r~~vKVIDFGSSc~~~q~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~l 404 (586)
T KOG0667|consen 325 PKRSRIKVIDFGSSCFESQRVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVL 404 (586)
T ss_pred CCcCceeEEecccccccCCcceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHh
Confidence 77889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcHHHHhhhhhhhhhhcc-cccchhhhhcc----------------ccccccCC-ccchhhhhcc-cCcHHHHHHHHH
Q 004954 637 GPIDLEMLMQGQEIYKYFTK-EYDLYYINEET----------------NQLEYIIP-EESSLEHHLQ-FSDAFFIDFVRT 697 (722)
Q Consensus 637 g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~----------------~~~~~~ip-~~~~l~~~~~-~~~~~l~dLL~~ 697 (722)
|.+|..++..+....+|++. .....+..... .......| ....+..... ..+..|.+||++
T Consensus 405 G~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~ 484 (586)
T KOG0667|consen 405 GLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKR 484 (586)
T ss_pred CCCCHHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHH
Confidence 99999999999999999988 33322222211 12444455 5555555555 566789999999
Q ss_pred hcccCCCCCcCHHHHHhCCCCC
Q 004954 698 LLEINPQRRPTAREALDHPWLQ 719 (722)
Q Consensus 698 mL~~dP~kRpTa~ElL~HPwf~ 719 (722)
||.+||.+|+|+.++|+||||.
T Consensus 485 ~L~~dP~~R~tp~qal~Hpfl~ 506 (586)
T KOG0667|consen 485 CLEWDPAERITPAQALNHPFLT 506 (586)
T ss_pred HhccCchhcCCHHHHhcCcccc
Confidence 9999999999999999999998
No 3
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.9e-48 Score=423.82 Aligned_cols=252 Identities=32% Similarity=0.546 Sum_probs=224.1
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeec----chhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec
Q 004954 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKN----DKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 488 (722)
Q Consensus 413 ~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~----~~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~ 488 (722)
..+|...++||+|||++||.+++..+|+.||+|++.+ .....++..+|++|.+.|+ |||||+++++|++.
T Consensus 17 ~~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~------HpnIV~f~~~FEDs 90 (592)
T KOG0575|consen 17 SKRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLK------HPNIVQFYHFFEDS 90 (592)
T ss_pred cceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcC------CCcEEeeeeEeecC
Confidence 3789999999999999999999999999999999976 3455678889999999886 78999999999999
Q ss_pred CeEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEec
Q 004954 489 EHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDL 567 (722)
Q Consensus 489 ~~l~iVmEy~~-gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DF 567 (722)
+++|||+|+|. ++|..+++... .+++.+++.+++||+.||.|||+.+|+|||||..|+++++ +.+|||+||
T Consensus 91 ~nVYivLELC~~~sL~el~Krrk------~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~--~~~VKIgDF 162 (592)
T KOG0575|consen 91 NNVYIVLELCHRGSLMELLKRRK------PLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNE--NMNVKIGDF 162 (592)
T ss_pred CceEEEEEecCCccHHHHHHhcC------CCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecC--cCcEEeccc
Confidence 99999999997 56666655222 3999999999999999999999999999999999999996 889999999
Q ss_pred CCccccc---CCccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHH
Q 004954 568 GSSCFQT---DNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEML 644 (722)
Q Consensus 568 Gls~~~~---~~~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~ 644 (722)
|+|.... ....+.||||.|.|||++.....+..+||||+||+||.||.|++||...+..+.+.+|.
T Consensus 163 GLAt~le~~~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik----------- 231 (592)
T KOG0575|consen 163 GLATQLEYDGERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIK----------- 231 (592)
T ss_pred ceeeeecCcccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHH-----------
Confidence 9998876 45667899999999999999999999999999999999999999999999999998885
Q ss_pred hhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCCCCC
Q 004954 645 MQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQHPY 722 (722)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~~~~ 722 (722)
..+|.+|... +.+.++||++||+.||.+|||+++||.|+||++.|
T Consensus 232 ------------------------~~~Y~~P~~l---------s~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~~g~ 276 (592)
T KOG0575|consen 232 ------------------------LNEYSMPSHL---------SAEAKDLIRKLLRPNPSERPSLDEVLDHPFFKSGF 276 (592)
T ss_pred ------------------------hcCccccccc---------CHHHHHHHHHHhcCCcccCCCHHHHhcCHhhhCCC
Confidence 2245566522 35578999999999999999999999999997664
No 4
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6e-49 Score=413.24 Aligned_cols=259 Identities=31% Similarity=0.503 Sum_probs=212.3
Q ss_pred ceecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchh--------hhHhHHHHHHHHHHhcccCCCCCCceeEE
Q 004954 410 TVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD--------FFDQSLDEIKLLKLVNKNDPADEHHILRL 481 (722)
Q Consensus 410 ~~l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~--------~~~~~~~E~~il~~L~~~~~~~hpnIv~l 481 (722)
..+.+.|.+.+.||+|+||.|-+|..+.+|+.||||++++... ......+|+++|++|+ ||+||++
T Consensus 168 ks~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~------HP~IV~~ 241 (475)
T KOG0615|consen 168 KSFNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLS------HPNIVRI 241 (475)
T ss_pred chhcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcC------CCCEEEE
Confidence 3467789999999999999999999999999999999976431 2234578999999997 6899999
Q ss_pred EEEEEecCeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEccc-CC
Q 004954 482 YDYFYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSY-QR 559 (722)
Q Consensus 482 ~~~f~~~~~l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~-~~ 559 (722)
+++|...+..||||||++| .|.+.+..+.. +.+...+.+++||+.||.|||++||+||||||+|||+..+ .+
T Consensus 242 ~d~f~~~ds~YmVlE~v~GGeLfd~vv~nk~------l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~ 315 (475)
T KOG0615|consen 242 KDFFEVPDSSYMVLEYVEGGELFDKVVANKY------LREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAED 315 (475)
T ss_pred eeeeecCCceEEEEEEecCccHHHHHHhccc------cccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcc
Confidence 9999999999999999985 68887765443 7788889999999999999999999999999999999864 46
Q ss_pred CeEEEEecCCcccccCC--ccccccCCcccCchhhcCCC---CCchhhHHHHHHHHHHHHhCCCCCCCChHHH-HHHHHH
Q 004954 560 CEIKIIDLGSSCFQTDN--LCLYVQSRSYRAPEVIIGLP---YDQKIDLWSLGCILAELWTGEVLFPNDAVVM-ILARII 633 (722)
Q Consensus 560 ~~vkL~DFGls~~~~~~--~~~~~gt~~y~APE~l~~~~---~s~ksDIWSLGviL~elltG~~PF~~~~~~e-~l~~i~ 633 (722)
+.+||+|||+|+..+.. ..+.||||.|.|||++.+.. +..++|||||||+||-+|+|.+||.+..... ...+|.
T Consensus 316 ~llKItDFGlAK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~ 395 (475)
T KOG0615|consen 316 CLLKITDFGLAKVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQIL 395 (475)
T ss_pred eEEEecccchhhccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHh
Confidence 89999999999988543 56689999999999998765 3358899999999999999999997754433 444443
Q ss_pred hhcCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHH
Q 004954 634 GMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREAL 713 (722)
Q Consensus 634 ~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL 713 (722)
+..=.+- .+... ..+++.++||.+||..||++|||++|+|
T Consensus 396 ~G~y~f~---------------------------------p~~w~-------~Iseea~dlI~~mL~VdP~~R~s~~eaL 435 (475)
T KOG0615|consen 396 KGRYAFG---------------------------------PLQWD-------RISEEALDLINWMLVVDPENRPSADEAL 435 (475)
T ss_pred cCccccc---------------------------------Chhhh-------hhhHHHHHHHHHhhEeCcccCcCHHHHh
Confidence 2111100 00011 1235678999999999999999999999
Q ss_pred hCCCCCC
Q 004954 714 DHPWLQH 720 (722)
Q Consensus 714 ~HPwf~~ 720 (722)
+||||+.
T Consensus 436 ~hpW~~~ 442 (475)
T KOG0615|consen 436 NHPWFKD 442 (475)
T ss_pred cChhhhc
Confidence 9999974
No 5
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.9e-49 Score=418.51 Aligned_cols=283 Identities=32% Similarity=0.524 Sum_probs=242.3
Q ss_pred eecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhh--HhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec
Q 004954 411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFF--DQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 488 (722)
Q Consensus 411 ~l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~~~--~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~ 488 (722)
.+.+||+++++||.|+||.||+|+.+.+|..||||.+++.-... -.-++|++.|++++ .||||+++.+++.+.
T Consensus 7 ~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln-----~hpniikL~Evi~d~ 81 (538)
T KOG0661|consen 7 IFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLN-----PHPNIIKLKEVIRDN 81 (538)
T ss_pred hHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcC-----CCCcchhhHHHhhcc
Confidence 34689999999999999999999999999999999987642222 23457888888886 378999999999998
Q ss_pred C-eEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEec
Q 004954 489 E-HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDL 567 (722)
Q Consensus 489 ~-~l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DF 567 (722)
+ ++++|||||..+|+++++.+. ..|++..++.|+.||++||+|+|++|+.||||||+||||.. ...|||+||
T Consensus 82 ~~~L~fVfE~Md~NLYqLmK~R~-----r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~--~~~iKiaDF 154 (538)
T KOG0661|consen 82 DRILYFVFEFMDCNLYQLMKDRN-----RLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISG--NDVIKIADF 154 (538)
T ss_pred CceEeeeHHhhhhhHHHHHhhcC-----CcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecc--cceeEeccc
Confidence 8 999999999999999998663 34999999999999999999999999999999999999995 778999999
Q ss_pred CCcccccC--CccccccCCcccCchhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHH
Q 004954 568 GSSCFQTD--NLCLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEML 644 (722)
Q Consensus 568 Gls~~~~~--~~~~~~gt~~y~APE~l~~-~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~ 644 (722)
|+|+.... +.+.++.|++|+|||+++. ..|+.++||||+|||++|+.+-++.|+|.+..+.+.+|...+|.+..+.|
T Consensus 155 GLARev~SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~ 234 (538)
T KOG0661|consen 155 GLAREVRSKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSW 234 (538)
T ss_pred ccccccccCCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccc
Confidence 99987654 4566899999999999875 45899999999999999999999999999999999999999999998888
Q ss_pred hhhhhhhhhhcccccchhhhhccccccccCC--ccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCCCC
Q 004954 645 MQGQEIYKYFTKEYDLYYINEETNQLEYIIP--EESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQHP 721 (722)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip--~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~~~ 721 (722)
..+.++..-.. ..+| ....+.+......+++.+||.+||.|||.+||||.|+|+|||||.+
T Consensus 235 ~eg~~La~~mn----------------f~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~ 297 (538)
T KOG0661|consen 235 PEGYNLASAMN----------------FRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPFFQVG 297 (538)
T ss_pred hhHHHHHHHhc----------------cCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCcccccc
Confidence 77654433221 1222 2234445555567889999999999999999999999999999865
No 6
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=6.8e-47 Score=395.56 Aligned_cols=253 Identities=31% Similarity=0.471 Sum_probs=214.2
Q ss_pred ecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEee--cchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 004954 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK--NDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (722)
Q Consensus 412 l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~--~~~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (722)
...+.+.++.||+|+.|+||+++|+.+++.+|+|++. .+.....++.+|+++++..+ ||+||.+|++|....
T Consensus 77 ~~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~------spyIV~~ygaF~~~~ 150 (364)
T KOG0581|consen 77 SLSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQ------SPYIVGFYGAFYSNG 150 (364)
T ss_pred CHHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCC------CCCeeeEeEEEEeCC
Confidence 3456778889999999999999999999999999994 45566788999999999885 679999999999999
Q ss_pred -eEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHH-CCCccccCCCCceEEcccCCCeEEEEe
Q 004954 490 -HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS-LGIIHCDLKPENILIKSYQRCEIKIID 566 (722)
Q Consensus 490 -~l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs-~gIvHrDLKp~NILl~~~~~~~vkL~D 566 (722)
.+.|+||||.| +|..+++..+ .+++..+..|++++++||.|||+ .+||||||||+||||++ .|+|||+|
T Consensus 151 ~~isI~mEYMDgGSLd~~~k~~g------~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNs--kGeVKicD 222 (364)
T KOG0581|consen 151 EEISICMEYMDGGSLDDILKRVG------RIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNS--KGEVKICD 222 (364)
T ss_pred ceEEeehhhcCCCCHHHHHhhcC------CCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeecc--CCCEEecc
Confidence 59999999986 5555554332 28999999999999999999995 89999999999999997 89999999
Q ss_pred cCCcccccCC-ccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC-----hHHHHHHHHHhhcCCCc
Q 004954 567 LGSSCFQTDN-LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPND-----AVVMILARIIGMLGPID 640 (722)
Q Consensus 567 FGls~~~~~~-~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~-----~~~e~l~~i~~~lg~~~ 640 (722)
||.+....+. ..+++||..|||||.+.+..|+.++||||||++++|+.+|+.||+.. ...+++..|+.. ++|
T Consensus 223 FGVS~~lvnS~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~--ppP 300 (364)
T KOG0581|consen 223 FGVSGILVNSIANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDE--PPP 300 (364)
T ss_pred ccccHHhhhhhcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcC--CCC
Confidence 9999876554 46789999999999999999999999999999999999999999774 444555555411 111
Q ss_pred HHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCCC
Q 004954 641 LEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 720 (722)
Q Consensus 641 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~~ 720 (722)
.+|.. ..+++|++||..||++||.+|||+.|+|+|||+++
T Consensus 301 --------------------------------~lP~~--------~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~ 340 (364)
T KOG0581|consen 301 --------------------------------RLPEG--------EFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFIKK 340 (364)
T ss_pred --------------------------------CCCcc--------cCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHHhh
Confidence 11211 24578999999999999999999999999999975
No 7
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=1.1e-46 Score=377.05 Aligned_cols=278 Identities=32% Similarity=0.501 Sum_probs=240.4
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchh---hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCe
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 490 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~---~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~ 490 (722)
.||..+++||+|.||.||+|+|..+|+.||||.++.... ......+|++.|++++ |+||+.++++|-+.+.
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~------h~nIi~LiD~F~~~~~ 75 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELK------HPNIIELIDVFPHKSN 75 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHcc------CcchhhhhhhccCCCc
Confidence 578899999999999999999999999999999986432 2456789999999997 6799999999999999
Q ss_pred EEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCc
Q 004954 491 LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (722)
Q Consensus 491 l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 570 (722)
+.||+|||+.+|...++.... .++...+..++.++++||+|||++.|+||||||.|+||++ ++.+||+|||++
T Consensus 76 l~lVfEfm~tdLe~vIkd~~i-----~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~--~g~lKiADFGLA 148 (318)
T KOG0659|consen 76 LSLVFEFMPTDLEVVIKDKNI-----ILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISS--DGQLKIADFGLA 148 (318)
T ss_pred eEEEEEeccccHHHHhccccc-----ccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcC--CCcEEeecccch
Confidence 999999999999988875543 3999999999999999999999999999999999999997 999999999999
Q ss_pred ccccCCcc---ccccCCcccCchhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhh
Q 004954 571 CFQTDNLC---LYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQ 646 (722)
Q Consensus 571 ~~~~~~~~---~~~gt~~y~APE~l~~~-~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~ 646 (722)
+....+.. ..+-|.+|+|||.+.|. .|+..+||||.|||+.||+-|.+-|++.+.-+++..|.+.+|.+..+.|+.
T Consensus 149 r~f~~p~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~ 228 (318)
T KOG0659|consen 149 RFFGSPNRIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPE 228 (318)
T ss_pred hccCCCCcccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCcc
Confidence 98775433 34679999999999886 599999999999999999999999999999999999999999999999998
Q ss_pred hhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCCC
Q 004954 647 GQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 720 (722)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~~ 720 (722)
...+.+|..-. ..| ...+...+.....+..|||.+||..||.+|+|+.|+|+||||+.
T Consensus 229 ~~~lpdY~~~~---------------~~P-~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~ 286 (318)
T KOG0659|consen 229 MTSLPDYVKIQ---------------QFP-KPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKS 286 (318)
T ss_pred ccccccHHHHh---------------cCC-CCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhc
Confidence 87776664311 011 11222233344566799999999999999999999999999974
No 8
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=4.9e-47 Score=384.99 Aligned_cols=279 Identities=27% Similarity=0.441 Sum_probs=236.3
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchh---hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCe
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 490 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~---~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~ 490 (722)
++|..+.++|+|+||.||+++++.||+.||||.+..+.+ .....++|+++|+.++ |+|+|.++.+|.....
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLk------H~NLVnLiEVFrrkrk 75 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLK------HENLVNLIEVFRRKRK 75 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcc------cchHHHHHHHHHhcce
Confidence 578899999999999999999999999999999975432 3456789999999997 6799999999999999
Q ss_pred EEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCc
Q 004954 491 LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (722)
Q Consensus 491 l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 570 (722)
+++|+|||..++++.+...... ++...+..+++|++.|+.|+|++++|||||||+||||+. .+.+||+|||+|
T Consensus 76 lhLVFE~~dhTvL~eLe~~p~G-----~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~--~gvvKLCDFGFA 148 (396)
T KOG0593|consen 76 LHLVFEYCDHTVLHELERYPNG-----VPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQ--NGVVKLCDFGFA 148 (396)
T ss_pred eEEEeeecchHHHHHHHhccCC-----CCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEec--CCcEEeccchhh
Confidence 9999999999988888765543 889999999999999999999999999999999999995 899999999999
Q ss_pred ccccC---CccccccCCcccCchhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhh
Q 004954 571 CFQTD---NLCLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQ 646 (722)
Q Consensus 571 ~~~~~---~~~~~~gt~~y~APE~l~~-~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~ 646 (722)
+.... ..+.++.|++|+|||.+.| ..|+.++||||+||++.||++|++.|++.+..+++..|++.+|++.+....
T Consensus 149 R~L~~pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~- 227 (396)
T KOG0593|consen 149 RTLSAPGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQS- 227 (396)
T ss_pred HhhcCCcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHH-
Confidence 87763 3445788999999999998 789999999999999999999999999999999999999999987765321
Q ss_pred hhhhhhhhcccccchhhhhcccccccc-CCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCC
Q 004954 647 GQEIYKYFTKEYDLYYINEETNQLEYI-IPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQ 719 (722)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~ 719 (722)
+ | ..+....++... ++...+++..+......+.||+++||+.||.+|++-+|+|.||+|+
T Consensus 228 ---i---F-------~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd 288 (396)
T KOG0593|consen 228 ---I---F-------SSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFD 288 (396)
T ss_pred ---H---h-------ccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcChHHH
Confidence 1 1 111111222222 2223455555555666789999999999999999999999999994
No 9
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.9e-45 Score=392.75 Aligned_cols=282 Identities=29% Similarity=0.474 Sum_probs=239.4
Q ss_pred CceecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEE
Q 004954 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYF 485 (722)
Q Consensus 409 ~~~l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~---~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f 485 (722)
...-.+.|+.+++||+|+||.||+|++..+|+.||+|.++.+. ....-..+|+.||++|. ||||+++.+..
T Consensus 112 ~~r~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~------HpNIikL~eiv 185 (560)
T KOG0600|consen 112 GPRRADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLD------HPNIIKLEEIV 185 (560)
T ss_pred cccchHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcC------CCcccceeeEE
Confidence 3444677999999999999999999999999999999987643 34456779999999996 78999999999
Q ss_pred Eec--CeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEE
Q 004954 486 YHL--EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIK 563 (722)
Q Consensus 486 ~~~--~~l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vk 563 (722)
... ..+|+|+|||..+|..++.... ..|++.++..+++||+.||.|+|++||+|||||.+||||+. +|.+|
T Consensus 186 t~~~~~siYlVFeYMdhDL~GLl~~p~-----vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn--~G~LK 258 (560)
T KOG0600|consen 186 TSKLSGSIYLVFEYMDHDLSGLLSSPG-----VKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDN--NGVLK 258 (560)
T ss_pred EecCCceEEEEEecccchhhhhhcCCC-----cccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcC--CCCEE
Confidence 877 6899999999999888776433 23999999999999999999999999999999999999995 89999
Q ss_pred EEecCCcccccCC----ccccccCCcccCchhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCC
Q 004954 564 IIDLGSSCFQTDN----LCLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGP 638 (722)
Q Consensus 564 L~DFGls~~~~~~----~~~~~gt~~y~APE~l~~~-~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~ 638 (722)
|+|||+|+++... .+..+-|.+|+|||.++|. .|+.++|+||.||||.||++|++.|++.+..+++..|.++.|.
T Consensus 259 iaDFGLAr~y~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGS 338 (560)
T KOG0600|consen 259 IADFGLARFYTPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGS 338 (560)
T ss_pred eccccceeeccCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCC
Confidence 9999999976543 4456779999999999986 5999999999999999999999999999999999999999999
Q ss_pred CcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCC
Q 004954 639 IDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 718 (722)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf 718 (722)
+..+.|. ...+.. ........+....+.......++..++|+..||..||.+|.||.++|+|+||
T Consensus 339 P~e~~W~-~~kLP~--------------~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF 403 (560)
T KOG0600|consen 339 PTEDYWP-VSKLPH--------------ATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYF 403 (560)
T ss_pred CChhccc-cccCCc--------------ccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcCccc
Confidence 9988776 222211 0112222333445555566778889999999999999999999999999999
No 10
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=8.9e-45 Score=379.57 Aligned_cols=253 Identities=29% Similarity=0.464 Sum_probs=216.8
Q ss_pred ecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 004954 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 487 (722)
Q Consensus 412 l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~----~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~ 487 (722)
-.+.|+++++||+|+||+|++++.+.+++.+|+|++++.. ...+....|..||..++ ||+||+++..|++
T Consensus 23 ~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~------hPFiv~l~ysFQt 96 (357)
T KOG0598|consen 23 GPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIK------HPFIVKLIYSFQT 96 (357)
T ss_pred ChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCC------CCcEeeeEEeccc
Confidence 3578999999999999999999999999999999998643 34567788888888864 7899999999999
Q ss_pred cCeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEec
Q 004954 488 LEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDL 567 (722)
Q Consensus 488 ~~~l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DF 567 (722)
.+++|+|+||+.|+-+-.....+ ..|++..++.++..|+.||.|||++|||||||||+|||++. .|.++|+||
T Consensus 97 ~~kLylVld~~~GGeLf~hL~~e-----g~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~--~GHi~LtDF 169 (357)
T KOG0598|consen 97 EEKLYLVLDYLNGGELFYHLQRE-----GRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDE--QGHIKLTDF 169 (357)
T ss_pred CCeEEEEEeccCCccHHHHHHhc-----CCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecC--CCcEEEecc
Confidence 99999999999875333333222 22999999999999999999999999999999999999996 899999999
Q ss_pred CCcccc---cCCccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHH
Q 004954 568 GSSCFQ---TDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEML 644 (722)
Q Consensus 568 Gls~~~---~~~~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~ 644 (722)
|+++.. +....+++||+.|||||++.+.+|+..+|+||||+++|+|++|.+||.+.+...+..+|.+...+.+
T Consensus 170 gL~k~~~~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~~~---- 245 (357)
T KOG0598|consen 170 GLCKEDLKDGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLPLP---- 245 (357)
T ss_pred ccchhcccCCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCCCC----
Confidence 999743 3345568999999999999999999999999999999999999999999999888888864321111
Q ss_pred hhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCc----CHHHHHhCCCCCC
Q 004954 645 MQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRP----TAREALDHPWLQH 720 (722)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRp----Ta~ElL~HPwf~~ 720 (722)
+...+.+.++||+++|+.||++|. .+.++-+||||..
T Consensus 246 ---------------------------------------p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~ 286 (357)
T KOG0598|consen 246 ---------------------------------------PGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKG 286 (357)
T ss_pred ---------------------------------------CccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCccccc
Confidence 112356789999999999999995 7999999999975
No 11
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-44 Score=377.10 Aligned_cols=280 Identities=34% Similarity=0.583 Sum_probs=236.3
Q ss_pred ecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEee---cchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe-
Q 004954 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK---NDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH- 487 (722)
Q Consensus 412 l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~---~~~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~- 487 (722)
+..+|..++.||+|+||.|+.+.++.+|+.||||.+. .......+..+|+++|++++ |+||+.+++++..
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~------HeNIi~l~di~~p~ 93 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLR------HENIIGLLDIFRPP 93 (359)
T ss_pred ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhc------CCCcceEEeecccc
Confidence 3566777899999999999999999999999999876 24455678889999999996 6799999999986
Q ss_pred ----cCeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEE
Q 004954 488 ----LEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIK 563 (722)
Q Consensus 488 ----~~~l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vk 563 (722)
-+.+|+|+|+|+.+|...++..+. ++...++.+++||+.||+|+|+.+|+||||||.|+|++. ++.+|
T Consensus 94 ~~~~f~DvYiV~elMetDL~~iik~~~~------L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~--~c~lK 165 (359)
T KOG0660|consen 94 SRDKFNDVYLVFELMETDLHQIIKSQQD------LTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNA--DCDLK 165 (359)
T ss_pred cccccceeEEehhHHhhHHHHHHHcCcc------ccHHHHHHHHHHHHHhcchhhcccccccccchhheeecc--CCCEE
Confidence 256999999999888888875543 889999999999999999999999999999999999996 89999
Q ss_pred EEecCCccccc-----CCccccccCCcccCchhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcC
Q 004954 564 IIDLGSSCFQT-----DNLCLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLG 637 (722)
Q Consensus 564 L~DFGls~~~~-----~~~~~~~gt~~y~APE~l~~-~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg 637 (722)
|+|||+|+... ...+.++.|.+|+|||++.. ..|+.++||||+||||.||++|++.|++.+...++..|+..+|
T Consensus 166 I~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lG 245 (359)
T KOG0660|consen 166 ICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLG 245 (359)
T ss_pred eccccceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcC
Confidence 99999998873 33466888999999999864 5799999999999999999999999999999999999999999
Q ss_pred CCcHHHHhhhh--hhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhC
Q 004954 638 PIDLEMLMQGQ--EIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 715 (722)
Q Consensus 638 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~H 715 (722)
.++.+.+.... ....|+... ...| ...++..++..++...+||.+||..||.+|+|++|+|+|
T Consensus 246 tP~~e~l~~i~s~~ar~yi~sl--------------p~~p-~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~h 310 (359)
T KOG0660|consen 246 TPSEEDLQKIRSEKARPYIKSL--------------PQIP-KQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAH 310 (359)
T ss_pred CCCHHHHHHhccHHHHHHHHhC--------------CCCC-CCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 99887765533 122222210 1111 233455566778889999999999999999999999999
Q ss_pred CCCCC
Q 004954 716 PWLQH 720 (722)
Q Consensus 716 Pwf~~ 720 (722)
|||..
T Consensus 311 PYl~~ 315 (359)
T KOG0660|consen 311 PYLAP 315 (359)
T ss_pred hhhhh
Confidence 99964
No 12
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.2e-45 Score=381.04 Aligned_cols=314 Identities=35% Similarity=0.608 Sum_probs=260.3
Q ss_pred CCCcceeeCceecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeE
Q 004954 401 NKDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILR 480 (722)
Q Consensus 401 ~~~~pi~~~~~l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~~~~~~~~E~~il~~L~~~~~~~hpnIv~ 480 (722)
.+.+-...++.+.+||.|..+||+|+||.|..+.|..++..||||+++.-....+..+-|+++|+++....+..---+++
T Consensus 76 dGH~v~~~gD~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~ 155 (415)
T KOG0671|consen 76 DGHYVYQVGDILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKFRCVQ 155 (415)
T ss_pred CceEEEEeccccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCceEEEe
Confidence 34456788999999999999999999999999999999999999999987778888899999999998877666668899
Q ss_pred EEEEEEecCeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEccc---
Q 004954 481 LYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSY--- 557 (722)
Q Consensus 481 l~~~f~~~~~l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~--- 557 (722)
+.++|...+|.|||+|.++-++.++++.+... +++...++.|++||+++++|||+.+++|-||||+|||+.+.
T Consensus 156 m~~wFdyrghiCivfellG~S~~dFlk~N~y~----~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~ 231 (415)
T KOG0671|consen 156 MRDWFDYRGHICIVFELLGLSTFDFLKENNYI----PFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYF 231 (415)
T ss_pred eehhhhccCceEEEEeccChhHHHHhccCCcc----ccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceE
Confidence 99999999999999999998999999876544 39999999999999999999999999999999999998531
Q ss_pred ---------------CCCeEEEEecCCcccccCCccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 004954 558 ---------------QRCEIKIIDLGSSCFQTDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPN 622 (722)
Q Consensus 558 ---------------~~~~vkL~DFGls~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~ 622 (722)
....|+|+|||.|.+........+.|..|+|||++++.+|+.+.||||+||||+|+.||...|+.
T Consensus 232 ~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqt 311 (415)
T KOG0671|consen 232 KTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQT 311 (415)
T ss_pred EEeccCCccceeccCCCcceEEEecCCcceeccCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceeccc
Confidence 13469999999999988888888999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhcccccchhhhhc-cccccccCCccchhhhhcc---cCcHHHHHHHHHh
Q 004954 623 DAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEE-TNQLEYIIPEESSLEHHLQ---FSDAFFIDFVRTL 698 (722)
Q Consensus 623 ~~~~e~l~~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ip~~~~l~~~~~---~~~~~l~dLL~~m 698 (722)
.+..+.++.|...+||+|..|+.... ..+||... .....+.. .....+.......+..... .....|.|||++|
T Consensus 312 Hen~EHLaMMerIlGp~P~~mi~r~~-~~Kyf~~~-rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~m 389 (415)
T KOG0671|consen 312 HENLEHLAMMERILGPIPSRMIKKTR-KEKYFRRG-RLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRM 389 (415)
T ss_pred CCcHHHHHHHHHhhCCCcHHHhhhhh-hHhhhhcc-cccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHH
Confidence 99999999999999999999987764 34444433 11111111 1111111111111111111 1124589999999
Q ss_pred cccCCCCCcCHHHHHhCCCCCC
Q 004954 699 LEINPQRRPTAREALDHPWLQH 720 (722)
Q Consensus 699 L~~dP~kRpTa~ElL~HPwf~~ 720 (722)
|..||.+|+|+.|+|.||||..
T Consensus 390 L~fDP~~RiTl~EAL~HpFF~~ 411 (415)
T KOG0671|consen 390 LEFDPARRITLREALSHPFFAR 411 (415)
T ss_pred HccCccccccHHHHhcCHHhhc
Confidence 9999999999999999999975
No 13
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.4e-44 Score=371.41 Aligned_cols=285 Identities=26% Similarity=0.401 Sum_probs=236.1
Q ss_pred CceecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchh---hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEE
Q 004954 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYF 485 (722)
Q Consensus 409 ~~~l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~---~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f 485 (722)
+..-.+.|+.++.|++|+||.||+|+|+.+++.||+|.++.++. +.-..++|+.+|..++ |||||.+-.+.
T Consensus 71 gCrsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~------H~NIV~vkEVV 144 (419)
T KOG0663|consen 71 GCRSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKAR------HPNIVEVKEVV 144 (419)
T ss_pred CcccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcC------CCCeeeeEEEE
Confidence 34445789999999999999999999999999999999986542 2334678999998886 68999999887
Q ss_pred Ee--cCeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEE
Q 004954 486 YH--LEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIK 563 (722)
Q Consensus 486 ~~--~~~l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vk 563 (722)
.. .+.+|||||||+.+|..++.... ..|...++..+..|++.||+|||.+.|+||||||+|+|++. .|.+|
T Consensus 145 vG~~~d~iy~VMe~~EhDLksl~d~m~-----q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~--~G~lK 217 (419)
T KOG0663|consen 145 VGSNMDKIYIVMEYVEHDLKSLMETMK-----QPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSH--KGILK 217 (419)
T ss_pred eccccceeeeeHHHHHhhHHHHHHhcc-----CCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeecc--CCcEE
Confidence 74 46899999999999988887654 23999999999999999999999999999999999999995 89999
Q ss_pred EEecCCcccccCC---ccccccCCcccCchhhcCCC-CCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCC
Q 004954 564 IIDLGSSCFQTDN---LCLYVQSRSYRAPEVIIGLP-YDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPI 639 (722)
Q Consensus 564 L~DFGls~~~~~~---~~~~~gt~~y~APE~l~~~~-~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~ 639 (722)
|+|||+|+.++.+ .+..+-|.+|+|||.+++.+ |+.++|+||+|||+.||+++++.|++.+..+++.+|.+.+|.+
T Consensus 218 iaDFGLAR~ygsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtP 297 (419)
T KOG0663|consen 218 IADFGLAREYGSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTP 297 (419)
T ss_pred ecccchhhhhcCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCC
Confidence 9999999999887 45567799999999999865 9999999999999999999999999999999999999999998
Q ss_pred cHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccC--cHHHHHHHHHhcccCCCCCcCHHHHHhCCC
Q 004954 640 DLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFS--DAFFIDFVRTLLEINPQRRPTAREALDHPW 717 (722)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~--~~~l~dLL~~mL~~dP~kRpTa~ElL~HPw 717 (722)
....|+.-.....+-.-+.. ......+...+... ++.-.+||+++|..||.+|.||.|+|+|+|
T Consensus 298 te~iwpg~~~lp~~k~~~f~--------------~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~ 363 (419)
T KOG0663|consen 298 SEAIWPGYSELPAVKKMTFS--------------EHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEY 363 (419)
T ss_pred ccccCCCccccchhhccccC--------------CCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcccc
Confidence 88777664433221100000 00112222222222 256679999999999999999999999999
Q ss_pred CCC
Q 004954 718 LQH 720 (722)
Q Consensus 718 f~~ 720 (722)
|..
T Consensus 364 F~e 366 (419)
T KOG0663|consen 364 FRE 366 (419)
T ss_pred ccc
Confidence 975
No 14
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=5.7e-43 Score=396.57 Aligned_cols=299 Identities=29% Similarity=0.488 Sum_probs=235.3
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec-CeE
Q 004954 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL-EHL 491 (722)
Q Consensus 413 ~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~-~~l 491 (722)
.++|+++++||+|+||+||+|.+..+++.||||+++...........|+.+++.+++.+...|++|++++++|... .+.
T Consensus 128 ~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~ 207 (467)
T PTZ00284 128 TQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHM 207 (467)
T ss_pred CCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceE
Confidence 5889999999999999999999999999999999976544455667899999999988777888999999999865 589
Q ss_pred EEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHH-CCCccccCCCCceEEcccC------------
Q 004954 492 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS-LGIIHCDLKPENILIKSYQ------------ 558 (722)
Q Consensus 492 ~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs-~gIvHrDLKp~NILl~~~~------------ 558 (722)
++|||+++++|++++.... .+++..++.|+.||+.||.|||+ .|||||||||+|||++..+
T Consensus 208 ~iv~~~~g~~l~~~l~~~~------~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~ 281 (467)
T PTZ00284 208 CIVMPKYGPCLLDWIMKHG------PFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALP 281 (467)
T ss_pred EEEEeccCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccC
Confidence 9999999888988876432 28899999999999999999998 5999999999999998532
Q ss_pred --CCeEEEEecCCcccccCCccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhc
Q 004954 559 --RCEIKIIDLGSSCFQTDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGML 636 (722)
Q Consensus 559 --~~~vkL~DFGls~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~l 636 (722)
.+.+||+|||.+..........++|+.|+|||++.+..++.++|||||||++|||++|++||.+.+..+.+..+...+
T Consensus 282 ~~~~~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~ 361 (467)
T PTZ00284 282 PDPCRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTL 361 (467)
T ss_pred CCCceEEECCCCccccCccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHc
Confidence 135999999998766655666789999999999999999999999999999999999999999988889999999999
Q ss_pred CCCcHHHHhhhh--hhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHh
Q 004954 637 GPIDLEMLMQGQ--EIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 714 (722)
Q Consensus 637 g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~ 714 (722)
|.+|.++..... ....++......... .....+... .....+. ....++.+.+||.+||++||.+||||+|+|+
T Consensus 362 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~--~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~ 437 (467)
T PTZ00284 362 GRLPSEWAGRCGTEEARLLYNSAGQLRPC-TDPKHLARI-ARARPVR--EVIRDDLLCDLIYGLLHYDRQKRLNARQMTT 437 (467)
T ss_pred CCCCHHHHhhccchhHHHHhhhccccccc-CCHHHHHhh-hcccchh--hhhchHHHHHHHHHhCCcChhhCCCHHHHhc
Confidence 999877654321 111121111100000 000000000 0000000 0112467889999999999999999999999
Q ss_pred CCCCCCC
Q 004954 715 HPWLQHP 721 (722)
Q Consensus 715 HPwf~~~ 721 (722)
||||++-
T Consensus 438 Hp~~~~~ 444 (467)
T PTZ00284 438 HPYVLKY 444 (467)
T ss_pred Ccccccc
Confidence 9999864
No 15
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=6.7e-44 Score=385.96 Aligned_cols=251 Identities=30% Similarity=0.487 Sum_probs=220.7
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec
Q 004954 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 488 (722)
Q Consensus 413 ~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~----~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~ 488 (722)
..+|.+.+.||.|+|++|++|+++.+++.||||++.+.- ...+-..+|..+|.+|. .||.|++||..|++.
T Consensus 72 ~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~-----~hPgivkLy~TFQD~ 146 (604)
T KOG0592|consen 72 PNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLS-----GHPGIVKLYFTFQDE 146 (604)
T ss_pred hhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhh-----CCCCeEEEEEEeecc
Confidence 367999999999999999999999999999999986532 22345667888999887 589999999999999
Q ss_pred CeEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEec
Q 004954 489 EHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDL 567 (722)
Q Consensus 489 ~~l~iVmEy~~-gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DF 567 (722)
..+|+|+||++ |.|+++++.... |.+..++.++.||+.||+|||++|||||||||+|||++. ++.++|+||
T Consensus 147 ~sLYFvLe~A~nGdll~~i~K~Gs------fde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~--dmhikITDF 218 (604)
T KOG0592|consen 147 ESLYFVLEYAPNGDLLDLIKKYGS------FDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDK--DGHIKITDF 218 (604)
T ss_pred cceEEEEEecCCCcHHHHHHHhCc------chHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcC--CCcEEEeec
Confidence 99999999997 689999987643 999999999999999999999999999999999999996 999999999
Q ss_pred CCcccccCC----------------ccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHH
Q 004954 568 GSSCFQTDN----------------LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILAR 631 (722)
Q Consensus 568 Gls~~~~~~----------------~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~ 631 (722)
|.|+..... .+.++||-.|.+||++.....+..+|||+||||||+|+.|.+||.+.+..-++++
T Consensus 219 GsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqk 298 (604)
T KOG0592|consen 219 GSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQK 298 (604)
T ss_pred cccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHH
Confidence 988653321 2458999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHH
Q 004954 632 IIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTARE 711 (722)
Q Consensus 632 i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~E 711 (722)
|+++ .+.+|+. .++.+.+||+++|..||.+|+|+++
T Consensus 299 I~~l-----------------------------------~y~fp~~---------fp~~a~dLv~KLLv~dp~~Rlt~~q 334 (604)
T KOG0592|consen 299 IQAL-----------------------------------DYEFPEG---------FPEDARDLIKKLLVRDPSDRLTSQQ 334 (604)
T ss_pred HHHh-----------------------------------cccCCCC---------CCHHHHHHHHHHHccCccccccHHH
Confidence 8743 3444443 2366889999999999999999999
Q ss_pred HHhCCCCCC
Q 004954 712 ALDHPWLQH 720 (722)
Q Consensus 712 lL~HPwf~~ 720 (722)
|-+||||..
T Consensus 335 Ik~HpFF~~ 343 (604)
T KOG0592|consen 335 IKAHPFFEG 343 (604)
T ss_pred HhhCccccc
Confidence 999999975
No 16
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-43 Score=359.78 Aligned_cols=250 Identities=26% Similarity=0.488 Sum_probs=222.5
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec
Q 004954 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 488 (722)
Q Consensus 413 ~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~----~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~ 488 (722)
-++|++++.||.|+||+|.+++++.+|..+|+|++.+.. ...+...+|.++|+.+. ||+++++++.|.+.
T Consensus 43 l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~------~PFlv~l~~t~~d~ 116 (355)
T KOG0616|consen 43 LQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVS------HPFLVKLYGTFKDN 116 (355)
T ss_pred hhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhcc------CceeEEEEEeeccC
Confidence 367999999999999999999999999999999998653 34566778888888875 78999999999999
Q ss_pred CeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEec
Q 004954 489 EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDL 567 (722)
Q Consensus 489 ~~l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DF 567 (722)
+.++|||||++| .|..+++..++ |++..++.++.||+.||+|||+++|++|||||+|||++. +|.+||+||
T Consensus 117 ~~lymvmeyv~GGElFS~Lrk~~r------F~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~--~G~iKitDF 188 (355)
T KOG0616|consen 117 SNLYMVMEYVPGGELFSYLRKSGR------FSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQ--NGHIKITDF 188 (355)
T ss_pred CeEEEEEeccCCccHHHHHHhcCC------CCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeecc--CCcEEEEec
Confidence 999999999985 57777776544 999999999999999999999999999999999999996 899999999
Q ss_pred CCcccccCCccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 004954 568 GSSCFQTDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 647 (722)
Q Consensus 568 Gls~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~ 647 (722)
|+|+.......+.||||.|+|||++..++|..++|+|||||++|||+.|.+||.+.++..++.+|...--
T Consensus 189 GFAK~v~~rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v---------- 258 (355)
T KOG0616|consen 189 GFAKRVSGRTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKV---------- 258 (355)
T ss_pred cceEEecCcEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcc----------
Confidence 9999999988889999999999999999999999999999999999999999999999999988874322
Q ss_pred hhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCC-----cCHHHHHhCCCCCC
Q 004954 648 QEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRR-----PTAREALDHPWLQH 720 (722)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kR-----pTa~ElL~HPwf~~ 720 (722)
.+|. ..+..+++||+++|+.|-.+| .-..++-.||||+.
T Consensus 259 -------------------------~fP~---------~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~ 302 (355)
T KOG0616|consen 259 -------------------------KFPS---------YFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKG 302 (355)
T ss_pred -------------------------cCCc---------ccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccCccccc
Confidence 2222 234668999999999999999 35789999999975
No 17
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5e-43 Score=374.32 Aligned_cols=319 Identities=35% Similarity=0.604 Sum_probs=273.6
Q ss_pred cccCCccCCCCcceeeCceec-CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccC
Q 004954 393 KNRTGFEENKDLPIILNTVIA-GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKND 471 (722)
Q Consensus 393 ~~~~~~~~~~~~pi~~~~~l~-~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~~~~~~~~E~~il~~L~~~~ 471 (722)
+....|..++++|+.+++++. +||-+.++||.|.|++||+|.|..+.+.||+|+.+......+..+.|+++|+.++...
T Consensus 56 E~~~dY~kGGYHpV~IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~D 135 (590)
T KOG1290|consen 56 EDPEDYRKGGYHPVRIGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGD 135 (590)
T ss_pred cChhhhhcCCCceeeccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcC
Confidence 445677888999999999998 9999999999999999999999999999999999998888889999999999999876
Q ss_pred --CCCCCceeEEEEEEEec----CeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHH-CCCcc
Q 004954 472 --PADEHHILRLYDYFYHL----EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS-LGIIH 544 (722)
Q Consensus 472 --~~~hpnIv~l~~~f~~~----~~l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs-~gIvH 544 (722)
.....+||++++.|... .|+|||+|+++.+|+.+++.....+ +++..++.|++||+.||.|||. +||||
T Consensus 136 p~~~~~~~VV~LlD~FkhsGpNG~HVCMVfEvLGdnLLklI~~s~YrG----lpl~~VK~I~~qvL~GLdYLH~ecgIIH 211 (590)
T KOG1290|consen 136 PNDPGKKCVVQLLDHFKHSGPNGQHVCMVFEVLGDNLLKLIKYSNYRG----LPLSCVKEICRQVLTGLDYLHRECGIIH 211 (590)
T ss_pred CCCCCCceeeeeeccceecCCCCcEEEEEehhhhhHHHHHHHHhCCCC----CcHHHHHHHHHHHHHHHHHHHHhcCccc
Confidence 44566999999999854 5999999999999999999876655 9999999999999999999995 69999
Q ss_pred ccCCCCceEEcc--------------------------------------------------------------------
Q 004954 545 CDLKPENILIKS-------------------------------------------------------------------- 556 (722)
Q Consensus 545 rDLKp~NILl~~-------------------------------------------------------------------- 556 (722)
-||||+|||+..
T Consensus 212 TDlKPENvLl~~~e~~~~~~~~~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~l~~~ 291 (590)
T KOG1290|consen 212 TDLKPENVLLCSTEIDPAKDAREAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEASLAGL 291 (590)
T ss_pred cCCCcceeeeeccccchhhhhhhhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhhhccc
Confidence 999999999820
Q ss_pred ----------------------------------------------c---------------------------------
Q 004954 557 ----------------------------------------------Y--------------------------------- 557 (722)
Q Consensus 557 ----------------------------------------------~--------------------------------- 557 (722)
.
T Consensus 292 ~~~~~~~~~~s~n~~~~~n~~~~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s~~s~ 371 (590)
T KOG1290|consen 292 EGIEEEPNQESYNNEPRINGNESTVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSSPSSP 371 (590)
T ss_pred ccccccccccccccccCCCccccchhhcccccccccccCCccccccCccccccccccccchhcccccccccccccCcCCc
Confidence 0
Q ss_pred -----------------CCCeEEEEecCCcccccCCccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCC
Q 004954 558 -----------------QRCEIKIIDLGSSCFQTDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLF 620 (722)
Q Consensus 558 -----------------~~~~vkL~DFGls~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF 620 (722)
.+..+||+|||-|++.....+.-++|+.|+|||++.+.+|+..+||||++|++|||+||..+|
T Consensus 372 ~~~~~n~~v~p~~~~~~~di~vKIaDlGNACW~~khFT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLF 451 (590)
T KOG1290|consen 372 GTIASNPLVNPDIPLPECDIRVKIADLGNACWVHKHFTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLF 451 (590)
T ss_pred cccccccccCCCCCCCccceeEEEeeccchhhhhhhhchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceee
Confidence 011489999999999998888889999999999999999999999999999999999999999
Q ss_pred CC------ChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccC---cHHH
Q 004954 621 PN------DAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFS---DAFF 691 (722)
Q Consensus 621 ~~------~~~~e~l~~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~---~~~l 691 (722)
.. ...++.++.|++++|.+|......+.....||++....-+..... .+ |-..-|...+... ...|
T Consensus 452 ePhsG~~Y~rDEDHiA~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK----~W-pL~~VL~eKY~~s~e~A~~f 526 (590)
T KOG1290|consen 452 EPHSGENYSRDEDHIALIMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLK----PW-PLYEVLIEKYEWSEEDAQQF 526 (590)
T ss_pred cCCCCCCCCccHHHHHHHHHHHhhccHHHHhcCcchHhhhccccceecccccC----CC-cHHHHHHHHhCCCHHHHHHH
Confidence 53 346789999999999999999999999999999887766544321 11 1111122222222 3468
Q ss_pred HHHHHHhcccCCCCCcCHHHHHhCCCCCC
Q 004954 692 IDFVRTLLEINPQRRPTAREALDHPWLQH 720 (722)
Q Consensus 692 ~dLL~~mL~~dP~kRpTa~ElL~HPwf~~ 720 (722)
.+||.-||+.+|++||||.++|+||||..
T Consensus 527 sdFL~PmLef~PeKR~tA~~cl~hPwLn~ 555 (590)
T KOG1290|consen 527 SDFLSPMLEFDPEKRPTAAQCLKHPWLNP 555 (590)
T ss_pred HHHHHHHHhcCccccccHHHHhcCccccC
Confidence 99999999999999999999999999973
No 18
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=1.3e-42 Score=367.98 Aligned_cols=278 Identities=28% Similarity=0.406 Sum_probs=224.6
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~--~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (722)
++|++.++||.|+||+||+|++..+++.||+|+++... .......+|+.+++.++ ||||+++++++...+..
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~------h~niv~~~~~~~~~~~~ 78 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLK------HANIVTLHDIIHTERCL 78 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCC------CCCEeeEEEEEcCCCeE
Confidence 57999999999999999999999999999999987532 22345678888888775 78999999999999999
Q ss_pred EEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCcc
Q 004954 492 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 571 (722)
Q Consensus 492 ~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~ 571 (722)
++||||+.++|.+++..... .+++..+..++.||+.||+|||++||+||||||+|||++. ++.+||+|||++.
T Consensus 79 ~lv~e~~~~~l~~~l~~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~--~~~~kl~DfG~~~ 151 (288)
T cd07871 79 TLVFEYLDSDLKQYLDNCGN-----LMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINE--KGELKLADFGLAR 151 (288)
T ss_pred EEEEeCCCcCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECC--CCCEEECcCccee
Confidence 99999999988887764322 2788999999999999999999999999999999999986 7889999999986
Q ss_pred cccCC---ccccccCCcccCchhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 004954 572 FQTDN---LCLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 647 (722)
Q Consensus 572 ~~~~~---~~~~~gt~~y~APE~l~~-~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~ 647 (722)
..... .....+++.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+..+.+..+...++.++.+.+...
T Consensus 152 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (288)
T cd07871 152 AKSVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGI 231 (288)
T ss_pred eccCCCccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhcc
Confidence 54322 223467899999999876 56899999999999999999999999999999999999999998888777654
Q ss_pred hhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCC
Q 004954 648 QEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 718 (722)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf 718 (722)
.....+..-..+. .....+.......+.++++||++||++||.+|||++|+|+||||
T Consensus 232 ~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f 288 (288)
T cd07871 232 TSNEEFRSYLFPQ--------------YRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF 288 (288)
T ss_pred ccchhhhccccCc--------------cCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence 3222221100000 00011111222345778999999999999999999999999998
No 19
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=4.5e-42 Score=362.17 Aligned_cols=280 Identities=27% Similarity=0.490 Sum_probs=222.7
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCe
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 490 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~---~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~ 490 (722)
++|++.+.||+|+||+||++++..+++.+|+|+++... .......+|+.+++.++ ||||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~~~~~ 74 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLK------QENIVELKEAFRRRGK 74 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCC------CccccchhhhEecCCE
Confidence 47999999999999999999999999999999987542 23345677888887775 6799999999999999
Q ss_pred EEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCc
Q 004954 491 LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (722)
Q Consensus 491 l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 570 (722)
.++||||+.+++++.+.... ..+++..++.++.||+.||.|||+.||+||||||+||+++. ++.+||+|||++
T Consensus 75 ~~lv~e~~~~~~l~~~~~~~-----~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~--~~~~kl~Dfg~~ 147 (287)
T cd07848 75 LYLVFEYVEKNMLELLEEMP-----NGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISH--NDVLKLCDFGFA 147 (287)
T ss_pred EEEEEecCCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcC--CCcEEEeeccCc
Confidence 99999999988777665322 23889999999999999999999999999999999999985 788999999998
Q ss_pred ccccCC----ccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhh
Q 004954 571 CFQTDN----LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQ 646 (722)
Q Consensus 571 ~~~~~~----~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~ 646 (722)
...... .....+++.|+|||++.+..++.++|||||||++|+|++|++||++.+..+.+..+....++++.+.+..
T Consensus 148 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (287)
T cd07848 148 RNLSEGSNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKL 227 (287)
T ss_pred ccccccccccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHh
Confidence 765432 2235689999999999998999999999999999999999999999888888888888888888766543
Q ss_pred hhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCC
Q 004954 647 GQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 718 (722)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf 718 (722)
......+.. . ...................+..+.+||++||+.||++|||++|+|+||||
T Consensus 228 ~~~~~~~~~-----~-------~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f 287 (287)
T cd07848 228 FYSNPRFHG-----L-------RFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF 287 (287)
T ss_pred hhccchhcc-----c-------ccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 211100000 0 00000000000111122345779999999999999999999999999998
No 20
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-42 Score=377.05 Aligned_cols=255 Identities=32% Similarity=0.507 Sum_probs=218.5
Q ss_pred eecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc----h--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEE
Q 004954 411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----K--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDY 484 (722)
Q Consensus 411 ~l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~----~--~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~ 484 (722)
...++|.+.+.||+|+||+|++|.+..+|+.||+|++.+. . .....+.+|+.+++.+++ ||||++++++
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~-----HpnI~~l~ev 88 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRS-----HPNIIRLLEV 88 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhcc-----CCCEeEEEEE
Confidence 4568999999999999999999999999999999987653 1 234556689999998873 6799999999
Q ss_pred EEecCeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEE
Q 004954 485 FYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIK 563 (722)
Q Consensus 485 f~~~~~l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vk 563 (722)
+....++++||||+.| .|++.+.... .+.+..++.+++||+.|++|||++||+||||||+|||++.+. +.+|
T Consensus 89 ~~t~~~~~ivmEy~~gGdL~~~i~~~g------~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~-~~~K 161 (370)
T KOG0583|consen 89 FATPTKIYIVMEYCSGGDLFDYIVNKG------RLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNE-GNLK 161 (370)
T ss_pred EecCCeEEEEEEecCCccHHHHHHHcC------CCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCC-CCEE
Confidence 9999999999999985 8888887632 288999999999999999999999999999999999999732 8999
Q ss_pred EEecCCcccc---cCCccccccCCcccCchhhcCCC-CC-chhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCC
Q 004954 564 IIDLGSSCFQ---TDNLCLYVQSRSYRAPEVIIGLP-YD-QKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGP 638 (722)
Q Consensus 564 L~DFGls~~~---~~~~~~~~gt~~y~APE~l~~~~-~s-~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~ 638 (722)
|+|||++... .......+||+.|+|||++.+.. |+ .++||||+||+||.|++|+.||...+...++..|...
T Consensus 162 l~DFG~s~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~--- 238 (370)
T KOG0583|consen 162 LSDFGLSAISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKG--- 238 (370)
T ss_pred EeccccccccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcC---
Confidence 9999999876 34567789999999999999988 86 7899999999999999999999997777777665421
Q ss_pred CcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCC
Q 004954 639 IDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 718 (722)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf 718 (722)
...+|.... ++++++||++||..||.+|+|+.++++||||
T Consensus 239 --------------------------------~~~~p~~~~--------S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~ 278 (370)
T KOG0583|consen 239 --------------------------------EFKIPSYLL--------SPEARSLIEKMLVPDPSTRITLLEILEHPWF 278 (370)
T ss_pred --------------------------------CccCCCCcC--------CHHHHHHHHHHcCCCcccCCCHHHHhhChhh
Confidence 222332210 4668899999999999999999999999999
Q ss_pred CC
Q 004954 719 QH 720 (722)
Q Consensus 719 ~~ 720 (722)
+.
T Consensus 279 ~~ 280 (370)
T KOG0583|consen 279 QK 280 (370)
T ss_pred cc
Confidence 86
No 21
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.7e-43 Score=365.33 Aligned_cols=280 Identities=32% Similarity=0.510 Sum_probs=228.5
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC----
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE---- 489 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~---- 489 (722)
-.|.-.+++|+|+||.||+|+...+++.||||.+-.++.. -.+|+++|+.+ +|||||++..+|....
T Consensus 24 i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~---knrEl~im~~l------~HpNIV~L~~~f~~~~~~d~ 94 (364)
T KOG0658|consen 24 ISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY---KNRELQIMRKL------DHPNIVRLLYFFSSSTESDE 94 (364)
T ss_pred EEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCc---CcHHHHHHHhc------CCcCeeeEEEEEEecCCCch
Confidence 3588899999999999999999999999999998777643 34788999855 5889999999998542
Q ss_pred -eEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecC
Q 004954 490 -HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (722)
Q Consensus 490 -~l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFG 568 (722)
.+.+|||||+.+|..+++..-. ....++.-.++.+..||++||+|||+.||+||||||.|+||+. .++.+||+|||
T Consensus 95 ~~lnlVleymP~tL~~~~r~~~~--~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~-~tg~LKicDFG 171 (364)
T KOG0658|consen 95 VYLNLVLEYMPETLYRVIRHYTR--ANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDP-DTGVLKICDFG 171 (364)
T ss_pred hHHHHHHHhchHHHHHHHHHHhh--cCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcC-CCCeEEeccCC
Confidence 4678999999999999886422 1223888889999999999999999999999999999999997 67999999999
Q ss_pred CcccccC--CccccccCCcccCchhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHh
Q 004954 569 SSCFQTD--NLCLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLM 645 (722)
Q Consensus 569 ls~~~~~--~~~~~~gt~~y~APE~l~~~-~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~ 645 (722)
+|+.... +...+.-|+.|+|||.+.|. .|+.++||||.||++.||+-|++.|++.+..+++..|++.+|.++.+.+.
T Consensus 172 SAK~L~~~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~ 251 (364)
T KOG0658|consen 172 SAKVLVKGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIK 251 (364)
T ss_pred cceeeccCCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHh
Confidence 9987543 34556779999999999986 59999999999999999999999999999999999999999999988776
Q ss_pred hhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCCC
Q 004954 646 QGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 720 (722)
Q Consensus 646 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~~ 720 (722)
..+....-+ . ...+.......-.....++++.+|+.++|+.+|.+|.++.|+|.||||..
T Consensus 252 ~mn~~y~~~--------------~-~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFde 311 (364)
T KOG0658|consen 252 SMNPNYTEF--------------K-FPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDE 311 (364)
T ss_pred hcCcccccc--------------c-CcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHH
Confidence 543221100 0 00000000000122345688999999999999999999999999999963
No 22
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=100.00 E-value=6.9e-44 Score=381.95 Aligned_cols=316 Identities=34% Similarity=0.593 Sum_probs=273.3
Q ss_pred CCCcceeeCceecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeE
Q 004954 401 NKDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILR 480 (722)
Q Consensus 401 ~~~~pi~~~~~l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~~~~~~~~E~~il~~L~~~~~~~hpnIv~ 480 (722)
.+++.+.+++++..||.|....|+|-||+|..|.|..-|..||||||.++......-+.|++||+.|+...+-+-.|+++
T Consensus 419 EGYYrv~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~Hclr 498 (752)
T KOG0670|consen 419 EGYYRVRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKFHCLR 498 (752)
T ss_pred cceEEEehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhhHHHH
Confidence 35678899999999999999999999999999999999999999999998888888899999999999988778889999
Q ss_pred EEEEEEecCeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCC
Q 004954 481 LYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRC 560 (722)
Q Consensus 481 l~~~f~~~~~l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~ 560 (722)
++..|.+.+|+|||+|.+.-+|.++++...... .|.+..++.++.||.-||..|..+||+|.||||+||||+. ...
T Consensus 499 l~r~F~hknHLClVFE~LslNLRevLKKyG~nv---GL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE-~k~ 574 (752)
T KOG0670|consen 499 LFRHFKHKNHLCLVFEPLSLNLREVLKKYGRNV---GLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNE-SKN 574 (752)
T ss_pred HHHHhhhcceeEEEehhhhchHHHHHHHhCccc---ceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEecc-Ccc
Confidence 999999999999999999999999998765543 3889999999999999999999999999999999999996 567
Q ss_pred eEEEEecCCcccccCC-ccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCC
Q 004954 561 EIKIIDLGSSCFQTDN-LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPI 639 (722)
Q Consensus 561 ~vkL~DFGls~~~~~~-~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~ 639 (722)
.+||||||.|.....+ .+.+.-+..|+|||+++|.+|+...|+||+||+||||.||+..|++.+...++.-++.+.|++
T Consensus 575 iLKLCDfGSA~~~~eneitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~ 654 (752)
T KOG0670|consen 575 ILKLCDFGSASFASENEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKF 654 (752)
T ss_pred eeeeccCccccccccccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCC
Confidence 8999999999887655 555677888999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHhhhhhhhhhhcccccchhhhhccc-------cccccCCccchhhhhccc---C-------cHHHHHHHHHhcccC
Q 004954 640 DLEMLMQGQEIYKYFTKEYDLYYINEETN-------QLEYIIPEESSLEHHLQF---S-------DAFFIDFVRTLLEIN 702 (722)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~ip~~~~l~~~~~~---~-------~~~l~dLL~~mL~~d 702 (722)
|..|+..++...+.|+.....++...... .+....|.. .+...+.. . -..|++||.+||..|
T Consensus 655 p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtk-dl~s~l~~~q~~~deq~~~~~~~rdLLdkml~Ld 733 (752)
T KOG0670|consen 655 PNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTK-DLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILD 733 (752)
T ss_pred cHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcch-hHHHHHhccCCCCchhHHHHHHHHHHHHHHhccC
Confidence 99999999999999888776655332211 111112211 11111110 1 136899999999999
Q ss_pred CCCCcCHHHHHhCCCCCCC
Q 004954 703 PQRRPTAREALDHPWLQHP 721 (722)
Q Consensus 703 P~kRpTa~ElL~HPwf~~~ 721 (722)
|++|.|..++|+||||+.+
T Consensus 734 P~KRit~nqAL~HpFi~~k 752 (752)
T KOG0670|consen 734 PEKRITVNQALKHPFITEK 752 (752)
T ss_pred hhhcCCHHHHhcCCcccCC
Confidence 9999999999999999863
No 23
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=8.7e-42 Score=363.97 Aligned_cols=283 Identities=25% Similarity=0.395 Sum_probs=218.3
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCe
Q 004954 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 490 (722)
Q Consensus 413 ~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~--~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~ 490 (722)
.++|++.+.||+|+||+||+|++..+++.||||+++... .......+|+.+++.++ ||||+++++++.....
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~------h~niv~~~~~~~~~~~ 77 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLK------HANIVLLHDIIHTKET 77 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCC------CCCcCeEEEEEecCCe
Confidence 468999999999999999999999999999999987532 22235667888888774 7899999999999999
Q ss_pred EEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCc
Q 004954 491 LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (722)
Q Consensus 491 l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 570 (722)
.++||||+.+++.+++.... ..+++..++.++.||+.||+|||+.||+||||||+|||++. ++.+||+|||++
T Consensus 78 ~~lv~e~~~~~l~~~~~~~~-----~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~--~~~~kl~Dfg~~ 150 (303)
T cd07869 78 LTLVFEYVHTDLCQYMDKHP-----GGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISD--TGELKLADFGLA 150 (303)
T ss_pred EEEEEECCCcCHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECC--CCCEEECCCCcc
Confidence 99999999999888876432 22888999999999999999999999999999999999985 788999999998
Q ss_pred ccccCC---ccccccCCcccCchhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCC-hHHHHHHHHHhhcCCCcHHHHh
Q 004954 571 CFQTDN---LCLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPND-AVVMILARIIGMLGPIDLEMLM 645 (722)
Q Consensus 571 ~~~~~~---~~~~~gt~~y~APE~l~~~-~~s~ksDIWSLGviL~elltG~~PF~~~-~~~e~l~~i~~~lg~~~~~~~~ 645 (722)
...... .....+++.|+|||++.+. .++.++|||||||++|+|++|..||.+. +..+.+..+...++.+....+.
T Consensus 151 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (303)
T cd07869 151 RAKSVPSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWP 230 (303)
T ss_pred eeccCCCccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhcc
Confidence 654322 2335678999999998764 5889999999999999999999999874 4556677777777766655554
Q ss_pred hhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCCC
Q 004954 646 QGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 720 (722)
Q Consensus 646 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~~ 720 (722)
.......+..... ....|......-........+.+||++||+.||++|||+.|+|+||||++
T Consensus 231 ~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~ 293 (303)
T cd07869 231 GVHSLPHFKPERF------------TLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSD 293 (303)
T ss_pred chhhccccccccc------------cccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCccccc
Confidence 4332211111000 00001000000000112356889999999999999999999999999975
No 24
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=3e-42 Score=363.35 Aligned_cols=255 Identities=30% Similarity=0.486 Sum_probs=211.8
Q ss_pred ecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec
Q 004954 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 488 (722)
Q Consensus 412 l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~---~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~ 488 (722)
..++|.+.+.||+|+||+||+|+++.++..||||.+.+. +...+....|+++|+.++ |||||+++++.+..
T Consensus 8 ~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~------H~nIV~l~d~~~~~ 81 (429)
T KOG0595|consen 8 VVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELK------HPNIVRLLDCIEDD 81 (429)
T ss_pred ccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcC------CcceeeEEEEEecC
Confidence 357899999999999999999999999999999988654 345567789999999997 78999999999999
Q ss_pred CeEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEccc-CC---CeEE
Q 004954 489 EHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSY-QR---CEIK 563 (722)
Q Consensus 489 ~~l~iVmEy~~-gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~-~~---~~vk 563 (722)
+.+|+|||||. |+|.++++.... +++..++.++.||+.||++||+++||||||||.||||+.. .. ..+|
T Consensus 82 ~~i~lVMEyC~gGDLs~yi~~~~~------l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LK 155 (429)
T KOG0595|consen 82 DFIYLVMEYCNGGDLSDYIRRRGR------LPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLK 155 (429)
T ss_pred CeEEEEEEeCCCCCHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEE
Confidence 99999999998 567777765542 8999999999999999999999999999999999999863 22 5799
Q ss_pred EEecCCcccccCC--ccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcH
Q 004954 564 IIDLGSSCFQTDN--LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDL 641 (722)
Q Consensus 564 L~DFGls~~~~~~--~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~ 641 (722)
|+|||+|+..... ..+.+|+|.|||||++..+.|+.|+|+||+|+|+|+|++|+.||...+..+++..+.+.-.
T Consensus 156 IADFGfAR~L~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~---- 231 (429)
T KOG0595|consen 156 IADFGFARFLQPGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNE---- 231 (429)
T ss_pred ecccchhhhCCchhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcccc----
Confidence 9999999987654 5568999999999999999999999999999999999999999999998888875542211
Q ss_pred HHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCC
Q 004954 642 EMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQ 719 (722)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~ 719 (722)
.+|..... ......+|+...|+.||..|.+..+-+.|+++.
T Consensus 232 -------------------------------~~~~~~~~------~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~~l~ 272 (429)
T KOG0595|consen 232 -------------------------------IVPVLPAE------LSNPLRELLISLLQRNPKDRISFEDFFDHPFLA 272 (429)
T ss_pred -------------------------------ccCchhhh------ccCchhhhhhHHHhcCccccCchHHhhhhhhcc
Confidence 11110000 011244777778888888888888888887764
No 25
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-42 Score=385.07 Aligned_cols=254 Identities=27% Similarity=0.459 Sum_probs=220.8
Q ss_pred ceecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc----hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEE
Q 004954 410 TVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYF 485 (722)
Q Consensus 410 ~~l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~----~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f 485 (722)
.+-.++|+++++||+|.||+|+++..+.+++.+|||+++++ ++..+..+.|.+|+...+ .||.+++++.+|
T Consensus 364 ~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~-----~HPFL~~L~~~f 438 (694)
T KOG0694|consen 364 PLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELAN-----RHPFLVNLFSCF 438 (694)
T ss_pred cccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhc-----cCCeEeeccccc
Confidence 34457899999999999999999999999999999999975 355677888999998887 589999999999
Q ss_pred EecCeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEE
Q 004954 486 YHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKII 565 (722)
Q Consensus 486 ~~~~~l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~ 565 (722)
++.+++|+||||+.|+. ++...+ ...|++.+++.++..++.||+|||++||||||||.+|||++. +|.+||+
T Consensus 439 QT~~~l~fvmey~~Ggd--m~~~~~----~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~--eGh~kiA 510 (694)
T KOG0694|consen 439 QTKEHLFFVMEYVAGGD--LMHHIH----TDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDT--EGHVKIA 510 (694)
T ss_pred ccCCeEEEEEEecCCCc--EEEEEe----cccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcc--cCcEEec
Confidence 99999999999999875 222211 123999999999999999999999999999999999999996 8999999
Q ss_pred ecCCccc---ccCCccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHH
Q 004954 566 DLGSSCF---QTDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLE 642 (722)
Q Consensus 566 DFGls~~---~~~~~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~ 642 (722)
|||+++. .++...++||||.|+|||++.+..|+.++|+|||||+|||||.|+.||++++.+++...|+..-
T Consensus 511 DFGlcKe~m~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~------ 584 (694)
T KOG0694|consen 511 DFGLCKEGMGQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDE------ 584 (694)
T ss_pred ccccccccCCCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCC------
Confidence 9999975 4556778999999999999999999999999999999999999999999999999998886211
Q ss_pred HHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcC-----HHHHHhCCC
Q 004954 643 MLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPT-----AREALDHPW 717 (722)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpT-----a~ElL~HPw 717 (722)
...| ...+.+..++|+++|..||++|.- +.+|.+|||
T Consensus 585 -----------------------------~~yP---------~~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpF 626 (694)
T KOG0694|consen 585 -----------------------------VRYP---------RFLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPF 626 (694)
T ss_pred -----------------------------CCCC---------CcccHHHHHHHHHHhccCcccccCCCCCCchhhhhCCc
Confidence 1111 233467889999999999999985 688999999
Q ss_pred CCC
Q 004954 718 LQH 720 (722)
Q Consensus 718 f~~ 720 (722)
|+.
T Consensus 627 Fr~ 629 (694)
T KOG0694|consen 627 FRS 629 (694)
T ss_pred ccc
Confidence 986
No 26
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.6e-42 Score=362.26 Aligned_cols=284 Identities=32% Similarity=0.488 Sum_probs=236.7
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchh---hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC-
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE- 489 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~---~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~- 489 (722)
..|..+++||+|+||+||+|+++.+|+.||+|.++.+.. ......+|+-+++.|++.+ ||+++++++...+
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~-----~iv~L~dv~~~~~~ 85 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHAN-----HIVRLHDVIHTSNN 85 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCc-----ceEEEEeeeeeccc
Confidence 457777889999999999999999999999999986543 4456789999999998652 2999999999877
Q ss_pred -----eEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEE
Q 004954 490 -----HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKI 564 (722)
Q Consensus 490 -----~l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL 564 (722)
.+++|+||+.-.|..++....... ..++...++.+++||+.||+|||+++|+||||||.||||++ .+.+||
T Consensus 86 ~~~~~~l~lvfe~~d~DL~~ymd~~~~~~--~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~--~G~lKl 161 (323)
T KOG0594|consen 86 HRGIGKLYLVFEFLDRDLKKYMDSLPKKP--QGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISS--SGVLKL 161 (323)
T ss_pred ccccceEEEEEEeecccHHHHHHhccccc--cCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECC--CCcEee
Confidence 799999999999999988765432 23777899999999999999999999999999999999997 899999
Q ss_pred EecCCcccccCC---ccccccCCcccCchhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCc
Q 004954 565 IDLGSSCFQTDN---LCLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPID 640 (722)
Q Consensus 565 ~DFGls~~~~~~---~~~~~gt~~y~APE~l~~~-~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~ 640 (722)
+|||+|+-..-+ .+..+.|.+|+|||++.+. .|+..+||||+|||+.||+++++.|++.+..+++.+|...+|.+.
T Consensus 162 aDFGlAra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~ 241 (323)
T KOG0594|consen 162 ADFGLARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPN 241 (323)
T ss_pred eccchHHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCC
Confidence 999999865532 3446789999999999987 699999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCCC
Q 004954 641 LEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 720 (722)
Q Consensus 641 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~~ 720 (722)
.+.|+......+|-.. + ...+....+....+..++...+++.+||+.+|.+|.||+.+|+||||+.
T Consensus 242 e~~Wp~v~~~~~~k~~----f----------~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~ 307 (323)
T KOG0594|consen 242 EKDWPGVSSLPDYKAP----F----------PKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSE 307 (323)
T ss_pred ccCCCCcccccccccc----C----------cCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhcc
Confidence 8888775544433210 0 0011122233333344467889999999999999999999999999975
No 27
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=4.8e-42 Score=372.03 Aligned_cols=254 Identities=29% Similarity=0.451 Sum_probs=210.2
Q ss_pred ecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 004954 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 487 (722)
Q Consensus 412 l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~----~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~ 487 (722)
-.++|.+++.||+|+||.||+|+.+.||..+|+|++++.. ........|..+|... +.|.||++|..|++
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~------ds~~vVKLyYsFQD 212 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEV------DSPWVVKLYYSFQD 212 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhc------CCCcEEEEEEEecC
Confidence 3578999999999999999999999999999999998754 3344556677777663 35799999999999
Q ss_pred cCeEEEEEEccccc-hHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEe
Q 004954 488 LEHLFIVCELLRAN-LYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIID 566 (722)
Q Consensus 488 ~~~l~iVmEy~~gs-Ll~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~D 566 (722)
.+++||||||++|+ +-.++.... .|++..++.++.+++.|+..||+.|+|||||||+|+||+. .|.+||+|
T Consensus 213 ~~~LYLiMEylPGGD~mTLL~~~~------~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~--~GHiKLSD 284 (550)
T KOG0605|consen 213 KEYLYLIMEYLPGGDMMTLLMRKD------TLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDA--KGHIKLSD 284 (550)
T ss_pred CCeeEEEEEecCCccHHHHHHhcC------cCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecC--CCCEeecc
Confidence 99999999999864 555554332 2999999999999999999999999999999999999996 99999999
Q ss_pred cCCcccccC-------------------------C-------------------------ccccccCCcccCchhhcCCC
Q 004954 567 LGSSCFQTD-------------------------N-------------------------LCLYVQSRSYRAPEVIIGLP 596 (722)
Q Consensus 567 FGls~~~~~-------------------------~-------------------------~~~~~gt~~y~APE~l~~~~ 596 (722)
||++.-... . ....+|||.|+|||++.+.+
T Consensus 285 FGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kg 364 (550)
T KOG0605|consen 285 FGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKG 364 (550)
T ss_pred ccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCC
Confidence 998731000 0 01148999999999999999
Q ss_pred CCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCc
Q 004954 597 YDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPE 676 (722)
Q Consensus 597 ~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~ 676 (722)
|+...|+|||||||||||.|.+||.+.++.+...+|+. |.. ....|.
T Consensus 365 Y~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~n------------wr~---------------------~l~fP~ 411 (550)
T KOG0605|consen 365 YGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVN------------WRE---------------------TLKFPE 411 (550)
T ss_pred CCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH------------Hhh---------------------hccCCC
Confidence 99999999999999999999999999999999999872 110 112233
Q ss_pred cchhhhhcccCcHHHHHHHHHhcccCCCCCc---CHHHHHhCCCCCC
Q 004954 677 ESSLEHHLQFSDAFFIDFVRTLLEINPQRRP---TAREALDHPWLQH 720 (722)
Q Consensus 677 ~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRp---Ta~ElL~HPwf~~ 720 (722)
...+ ..+..|||.+||. ||.+|. .++||-+||||+.
T Consensus 412 ~~~~-------s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~~ 450 (550)
T KOG0605|consen 412 EVDL-------SDEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFKG 450 (550)
T ss_pred cCcc-------cHHHHHHHHHHhc-CHHHhcCcccHHHHhcCCcccc
Confidence 2222 2568899999999 999998 4999999999975
No 28
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.6e-42 Score=380.08 Aligned_cols=249 Identities=31% Similarity=0.522 Sum_probs=219.3
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc----hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~----~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (722)
+-|++.+.||.|+.|.|-+|++..||+..|||++.+. ......+.+|+-||+.+. ||||+++|++++...
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~------HpnVl~LydVwe~~~ 85 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIE------HPNVLRLYDVWENKQ 85 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhc------CCCeeeeeeeeccCc
Confidence 5699999999999999999999999999999999765 234567889999999997 679999999999999
Q ss_pred eEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecC
Q 004954 490 HLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (722)
Q Consensus 490 ~l~iVmEy~~-gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFG 568 (722)
++|+|.||+. |.|++++..... +++.++..+++||+.|+.|+|..+|+||||||+|+|++. +..|||+|||
T Consensus 86 ~lylvlEyv~gGELFdylv~kG~------l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~--~~nIKIADFG 157 (786)
T KOG0588|consen 86 HLYLVLEYVPGGELFDYLVRKGP------LPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDV--KNNIKIADFG 157 (786)
T ss_pred eEEEEEEecCCchhHHHHHhhCC------CCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhc--ccCEeeeccc
Confidence 9999999997 578888875543 899999999999999999999999999999999999996 5669999999
Q ss_pred CcccccCC--ccccccCCcccCchhhcCCCCC-chhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHh
Q 004954 569 SSCFQTDN--LCLYVQSRSYRAPEVIIGLPYD-QKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLM 645 (722)
Q Consensus 569 ls~~~~~~--~~~~~gt~~y~APE~l~~~~~s-~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~ 645 (722)
+|...... ..+.||+|.|.|||++.|.+|. .++||||.|||||.||||++||.+++...++.++...
T Consensus 158 MAsLe~~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G---------- 227 (786)
T KOG0588|consen 158 MASLEVPGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRG---------- 227 (786)
T ss_pred eeecccCCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcC----------
Confidence 99765443 5568999999999999999986 7999999999999999999999999999998887522
Q ss_pred hhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCCC
Q 004954 646 QGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 720 (722)
Q Consensus 646 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~~ 720 (722)
.+.+|. +.+++.++||++||..||++|+|++||++|||++.
T Consensus 228 -------------------------~f~MPs---------~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g 268 (786)
T KOG0588|consen 228 -------------------------VFEMPS---------NISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSG 268 (786)
T ss_pred -------------------------cccCCC---------cCCHHHHHHHHHHhccCccccccHHHHhhCchhhc
Confidence 223332 23467889999999999999999999999999975
No 29
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=2e-41 Score=357.86 Aligned_cols=279 Identities=28% Similarity=0.449 Sum_probs=219.2
Q ss_pred CcEEEEEEeccCCCCceEEEEECC-CCcEEEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe--
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLH-TGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH-- 487 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~-tg~~vAvKil~~~~---~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~-- 487 (722)
.+|++.+.||+|+||+||+|++.. +++.+|+|+++... .......+|+.+++.+.. ..||||+++++++..
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~---~~hpniv~~~~~~~~~~ 77 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLET---FEHPNVVRLFDVCTVSR 77 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcc---cCCCCcceEEEEEeccc
Confidence 479999999999999999999854 57889999987532 222345678888777753 468999999999863
Q ss_pred ---cCeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEE
Q 004954 488 ---LEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKI 564 (722)
Q Consensus 488 ---~~~l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL 564 (722)
...+++||||+.++|.+++..... ..+++..++.++.||+.||.|||+.||+||||||+|||++. ++.+||
T Consensus 78 ~~~~~~~~lv~e~~~~~l~~~~~~~~~----~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~--~~~~kl 151 (290)
T cd07862 78 TDRETKLTLVFEHVDQDLTTYLDKVPE----PGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTS--SGQIKL 151 (290)
T ss_pred CCCCCcEEEEEccCCCCHHHHHHhCCC----CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcC--CCCEEE
Confidence 356899999999988888764332 23889999999999999999999999999999999999986 788999
Q ss_pred EecCCcccccCC--ccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHH
Q 004954 565 IDLGSSCFQTDN--LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLE 642 (722)
Q Consensus 565 ~DFGls~~~~~~--~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~ 642 (722)
+|||++...... .....+|+.|+|||++.+..++.++|||||||++|+|++|++||.+.+..+.+..+....+.+...
T Consensus 152 ~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~ 231 (290)
T cd07862 152 ADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEE 231 (290)
T ss_pred ccccceEeccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChh
Confidence 999998765433 233568999999999999899999999999999999999999999998888888888877766555
Q ss_pred HHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCC
Q 004954 643 MLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 718 (722)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf 718 (722)
.+......... .+.. .+ ...+.......++.+.+||.+||+.||++|||+.|+|+||||
T Consensus 232 ~~~~~~~~~~~---------------~~~~-~~-~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~f 290 (290)
T cd07862 232 DWPRDVALPRQ---------------AFHS-KS-AQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 290 (290)
T ss_pred hchhhhcccch---------------hccC-CC-CCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence 44332111100 0000 00 011111222345778999999999999999999999999998
No 30
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=3.2e-41 Score=368.84 Aligned_cols=298 Identities=31% Similarity=0.513 Sum_probs=227.3
Q ss_pred CcceeeCc---eecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc---hhhhHhHHHHHHHHHHhcccCCCCCC
Q 004954 403 DLPIILNT---VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEH 476 (722)
Q Consensus 403 ~~pi~~~~---~l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~---~~~~~~~~~E~~il~~L~~~~~~~hp 476 (722)
.+++..++ .+.++|++.+.||+|+||.||++.+..+|+.||+|++... ........+|+.+++.++ ||
T Consensus 7 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~------h~ 80 (359)
T cd07876 7 FYSVQVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVN------HK 80 (359)
T ss_pred cceecccchhhhhhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCC------CC
Confidence 34444444 4568999999999999999999999999999999998643 233455667888777764 78
Q ss_pred ceeEEEEEEEecC------eEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCC
Q 004954 477 HILRLYDYFYHLE------HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPE 550 (722)
Q Consensus 477 nIv~l~~~f~~~~------~l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~ 550 (722)
||+++++++.... ..++||||+.+++...+.. .+++..+..++.||+.||.|||+.||+||||||+
T Consensus 81 niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~--------~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~ 152 (359)
T cd07876 81 NIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIHM--------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPS 152 (359)
T ss_pred CEeeeeeeeccCCCccccceeEEEEeCCCcCHHHHHhc--------cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHH
Confidence 9999999987543 5799999999988776532 1788899999999999999999999999999999
Q ss_pred ceEEcccCCCeEEEEecCCcccccCC--ccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHH
Q 004954 551 NILIKSYQRCEIKIIDLGSSCFQTDN--LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMI 628 (722)
Q Consensus 551 NILl~~~~~~~vkL~DFGls~~~~~~--~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~ 628 (722)
|||++. ++.+||+|||++...... .....+|+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+.
T Consensus 153 NIl~~~--~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~ 230 (359)
T cd07876 153 NIVVKS--DCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQ 230 (359)
T ss_pred HEEECC--CCCEEEecCCCccccccCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 999986 789999999998754332 2335789999999999999999999999999999999999999999888888
Q ss_pred HHHHHhhcCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCcc--chhhhhcccCcHHHHHHHHHhcccCCCCC
Q 004954 629 LARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEE--SSLEHHLQFSDAFFIDFVRTLLEINPQRR 706 (722)
Q Consensus 629 l~~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~--~~l~~~~~~~~~~l~dLL~~mL~~dP~kR 706 (722)
+..+...++.++.+.+.........+.......... ......+.. ..........+..+++||.+||+.||++|
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R 306 (359)
T cd07876 231 WNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGI----SFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKR 306 (359)
T ss_pred HHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCc----chhhhccccccccccccccccchhHHHHHHHHhccCcccC
Confidence 888888888877665544332222111111000000 000011100 00011122335678999999999999999
Q ss_pred cCHHHHHhCCCCCC
Q 004954 707 PTAREALDHPWLQH 720 (722)
Q Consensus 707 pTa~ElL~HPwf~~ 720 (722)
||+.|+|+||||+.
T Consensus 307 ~t~~e~l~hp~~~~ 320 (359)
T cd07876 307 ISVDEALRHPYITV 320 (359)
T ss_pred CCHHHHhcCchhhh
Confidence 99999999999974
No 31
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=3.4e-41 Score=363.88 Aligned_cols=277 Identities=33% Similarity=0.565 Sum_probs=220.5
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec---
Q 004954 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL--- 488 (722)
Q Consensus 415 rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~---~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~--- 488 (722)
+|++.++||+|+||.||+|++..+|+.||||++... .....++.+|+++++.++ ||||+++++++...
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~------hpniv~~~~~~~~~~~~ 74 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLR------HPDIVEIKHIMLPPSRR 74 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCC------CCCEeeecceEeccCCC
Confidence 699999999999999999999999999999998642 223345678888888775 78999999988643
Q ss_pred --CeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEe
Q 004954 489 --EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIID 566 (722)
Q Consensus 489 --~~l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~D 566 (722)
..+++||||+.++|.+.+.... .+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|
T Consensus 75 ~~~~~~lv~e~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~--~~~~kL~D 146 (338)
T cd07859 75 EFKDIYVVFELMESDLHQVIKAND------DLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANA--DCKLKICD 146 (338)
T ss_pred CCceEEEEEecCCCCHHHHHHhcc------cCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECC--CCcEEEcc
Confidence 3589999999988888776432 2889999999999999999999999999999999999986 78899999
Q ss_pred cCCcccccCC------ccccccCCcccCchhhcC--CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCC
Q 004954 567 LGSSCFQTDN------LCLYVQSRSYRAPEVIIG--LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGP 638 (722)
Q Consensus 567 FGls~~~~~~------~~~~~gt~~y~APE~l~~--~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~ 638 (722)
||++...... .....+|+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+....+..+...+|.
T Consensus 147 fg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~ 226 (338)
T cd07859 147 FGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGT 226 (338)
T ss_pred CccccccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCC
Confidence 9998754221 123578999999999876 57899999999999999999999999998888888888888888
Q ss_pred CcHHHHhhhhhh--hhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCC
Q 004954 639 IDLEMLMQGQEI--YKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHP 716 (722)
Q Consensus 639 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HP 716 (722)
++...+...... ..++. .+....+ ..+.......++.+.+||.+||+.||++|||++|+|+||
T Consensus 227 ~~~~~~~~i~~~~~~~~~~-------------~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp 291 (338)
T cd07859 227 PSPETISRVRNEKARRYLS-------------SMRKKQP--VPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADP 291 (338)
T ss_pred CCHHHHHHhhhhhHHHHHH-------------hhcccCC--CchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCc
Confidence 777665443211 01100 0111111 112222334567789999999999999999999999999
Q ss_pred CCCC
Q 004954 717 WLQH 720 (722)
Q Consensus 717 wf~~ 720 (722)
||+.
T Consensus 292 ~f~~ 295 (338)
T cd07859 292 YFKG 295 (338)
T ss_pred hhhh
Confidence 9964
No 32
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=4.4e-41 Score=378.40 Aligned_cols=282 Identities=29% Similarity=0.474 Sum_probs=220.3
Q ss_pred ecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec---
Q 004954 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL--- 488 (722)
Q Consensus 412 l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~--- 488 (722)
...+|++.++||+|+||+||+|.+..+++.||||++..... ...+|+.+++.++ ||||++++++|...
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~---~~~~Ei~il~~l~------h~niv~l~~~~~~~~~~ 134 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDPQ---YKNRELLIMKNLN------HINIIFLKDYYYTECFK 134 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCcc---hHHHHHHHHHhcC------CCCCcceeeeEeecccc
Confidence 35689999999999999999999999999999998865432 3346888888775 78999999987542
Q ss_pred -----CeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEE
Q 004954 489 -----EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIK 563 (722)
Q Consensus 489 -----~~l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vk 563 (722)
..+++||||+++++.+++...... ...+++..++.++.||+.||+|||+.||+||||||+|||++. ..+.+|
T Consensus 135 ~~~~~~~l~lvmE~~~~~l~~~~~~~~~~--~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~-~~~~vk 211 (440)
T PTZ00036 135 KNEKNIFLNVVMEFIPQTVHKYMKHYARN--NHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDP-NTHTLK 211 (440)
T ss_pred cCCCceEEEEEEecCCccHHHHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcC-CCCcee
Confidence 257799999999988877643322 234899999999999999999999999999999999999985 345799
Q ss_pred EEecCCcccccC--CccccccCCcccCchhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCc
Q 004954 564 IIDLGSSCFQTD--NLCLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPID 640 (722)
Q Consensus 564 L~DFGls~~~~~--~~~~~~gt~~y~APE~l~~~-~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~ 640 (722)
|+|||++..... ......+|+.|+|||++.+. .++.++|||||||++|+|++|.+||.+.+..+.+.+++..+|.++
T Consensus 212 L~DFGla~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~ 291 (440)
T PTZ00036 212 LCDFGSAKNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPT 291 (440)
T ss_pred eeccccchhccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC
Confidence 999999976432 23345789999999998764 689999999999999999999999999988899999998888877
Q ss_pred HHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCCC
Q 004954 641 LEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 720 (722)
Q Consensus 641 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~~ 720 (722)
.+.+........ .-..+ ......+...+ +...+.++++||.+||++||.+|||+.|+|+||||+.
T Consensus 292 ~~~~~~~~~~~~--~~~~~----~~~~~~l~~~~---------p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~ 356 (440)
T PTZ00036 292 EDQLKEMNPNYA--DIKFP----DVKPKDLKKVF---------PKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDD 356 (440)
T ss_pred HHHHHHhchhhh--cccCC----ccCchhHHHHh---------ccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHh
Confidence 666543211100 00000 00000111111 1224567899999999999999999999999999963
No 33
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=8.6e-41 Score=357.30 Aligned_cols=280 Identities=27% Similarity=0.424 Sum_probs=226.0
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~--~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (722)
++|++.++||+|+||+||+|++..+++.+|+|.++... .......+|+.+++.++ ||||+++++++...+..
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~~~~~~ 79 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLK------HANIVTLHDIVHTDKSL 79 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCC------CCCcceEEEEEeeCCeE
Confidence 67999999999999999999999999999999987542 22234667888888775 68999999999999999
Q ss_pred EEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCcc
Q 004954 492 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 571 (722)
Q Consensus 492 ~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~ 571 (722)
++||||+.+++.+.+..... .+++..++.++.||+.||+|||+.||+||||||+|||++. ++.+||+|||++.
T Consensus 80 ~lv~e~~~~~l~~~~~~~~~-----~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~--~~~~kl~Dfg~~~ 152 (309)
T cd07872 80 TLVFEYLDKDLKQYMDDCGN-----IMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINE--RGELKLADFGLAR 152 (309)
T ss_pred EEEEeCCCCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECC--CCCEEECccccce
Confidence 99999999988887754322 2788999999999999999999999999999999999986 7889999999986
Q ss_pred cccCC---ccccccCCcccCchhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 004954 572 FQTDN---LCLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 647 (722)
Q Consensus 572 ~~~~~---~~~~~gt~~y~APE~l~~-~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~ 647 (722)
..... .....+++.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+..+.+..+...++.++.+.+...
T Consensus 153 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (309)
T cd07872 153 AKSVPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGI 232 (309)
T ss_pred ecCCCccccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhh
Confidence 54322 223467899999999875 45889999999999999999999999999999999999999998888777654
Q ss_pred hhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCCC
Q 004954 648 QEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 720 (722)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~~ 720 (722)
.....+........ ....+.......+.++++||++||+.||.+|||+.|+|+||||+.
T Consensus 233 ~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~ 291 (309)
T cd07872 233 SSNDEFKNYNFPKY--------------KPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRS 291 (309)
T ss_pred cchhhhhhhhcCcc--------------CCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhh
Confidence 43322211111000 000111122334677899999999999999999999999999985
No 34
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=9.7e-41 Score=364.29 Aligned_cols=290 Identities=30% Similarity=0.513 Sum_probs=223.8
Q ss_pred eecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 004954 411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 487 (722)
Q Consensus 411 ~l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~---~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~ 487 (722)
.+.++|++.+.||+|+||.||++.+..+++.+|||++... ........+|+.+++.++ ||||+++++++..
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~------h~niv~~~~~~~~ 87 (355)
T cd07874 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN------HKNIISLLNVFTP 87 (355)
T ss_pred hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhC------CCchhceeeeeec
Confidence 3568999999999999999999999999999999998653 223455667888887775 7899999999875
Q ss_pred c------CeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCe
Q 004954 488 L------EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCE 561 (722)
Q Consensus 488 ~------~~l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~ 561 (722)
. ...++||||+.+++...+.. .+++..++.++.||+.||.|||+.||+||||||+|||++. ++.
T Consensus 88 ~~~~~~~~~~~lv~e~~~~~l~~~~~~--------~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~--~~~ 157 (355)
T cd07874 88 QKSLEEFQDVYLVMELMDANLCQVIQM--------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCT 157 (355)
T ss_pred cccccccceeEEEhhhhcccHHHHHhh--------cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECC--CCC
Confidence 4 35799999999988776642 1788899999999999999999999999999999999986 788
Q ss_pred EEEEecCCcccccCC--ccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCC
Q 004954 562 IKIIDLGSSCFQTDN--LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPI 639 (722)
Q Consensus 562 vkL~DFGls~~~~~~--~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~ 639 (722)
+||+|||++...... .....+|+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+.+..++..++.+
T Consensus 158 ~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 237 (355)
T cd07874 158 LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 237 (355)
T ss_pred EEEeeCcccccCCCccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Confidence 999999999765443 233578999999999999999999999999999999999999999988888888888888877
Q ss_pred cHHHHhhhhhhhhhhcccccchhhhhccccccccCCccc--hhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCC
Q 004954 640 DLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEES--SLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPW 717 (722)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~--~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPw 717 (722)
..+.+...+.....+......... .......+... .........+..+++||.+||+.||++|||+.|+|+|||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~ 313 (355)
T cd07874 238 CPEFMKKLQPTVRNYVENRPKYAG----LTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPY 313 (355)
T ss_pred CHHHHHhhcHHHHHHHhcCCcccc----ccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcc
Confidence 666655444322211111110000 00000000000 000111223467899999999999999999999999999
Q ss_pred CCC
Q 004954 718 LQH 720 (722)
Q Consensus 718 f~~ 720 (722)
|+.
T Consensus 314 ~~~ 316 (355)
T cd07874 314 INV 316 (355)
T ss_pred hhc
Confidence 974
No 35
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6e-41 Score=355.87 Aligned_cols=265 Identities=28% Similarity=0.418 Sum_probs=217.1
Q ss_pred eecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec
Q 004954 411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 488 (722)
Q Consensus 411 ~l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~--~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~ 488 (722)
.-.+.|++.+.||.|..++||+|+...+++.||||++..++ ...+.+.+|+..+..++ ||||++++..|...
T Consensus 23 ~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~------HPNIv~~~~sFvv~ 96 (516)
T KOG0582|consen 23 LNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLID------HPNIVTYHCSFVVD 96 (516)
T ss_pred CCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcC------CCCcceEEEEEEec
Confidence 44578999999999999999999999999999999997653 23566777877777775 78999999999999
Q ss_pred CeEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEec
Q 004954 489 EHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDL 567 (722)
Q Consensus 489 ~~l~iVmEy~~-gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DF 567 (722)
..+|+||.||. |+++++++..-..+ +.+..+..|++++++||.|||++|.||||||+.||||+. +|.|||+||
T Consensus 97 ~~LWvVmpfMa~GS~ldIik~~~~~G----l~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~--dG~VkLadF 170 (516)
T KOG0582|consen 97 SELWVVMPFMAGGSLLDIIKTYYPDG----LEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDS--DGTVKLADF 170 (516)
T ss_pred ceeEEeehhhcCCcHHHHHHHHcccc----ccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcC--CCcEEEcCc
Confidence 99999999997 68888888766554 999999999999999999999999999999999999996 999999999
Q ss_pred CCcccccCC-------ccccccCCcccCchhhcC--CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCC
Q 004954 568 GSSCFQTDN-------LCLYVQSRSYRAPEVIIG--LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGP 638 (722)
Q Consensus 568 Gls~~~~~~-------~~~~~gt~~y~APE~l~~--~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~ 638 (722)
|.+....+. ..+++|||.|||||++.. ..|+.|+||||||++..||.+|..||....+..++..-.. +.
T Consensus 171 gvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLq--n~ 248 (516)
T KOG0582|consen 171 GVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQ--ND 248 (516)
T ss_pred eeeeeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhc--CC
Confidence 976433221 145689999999999654 4699999999999999999999999998887776654433 22
Q ss_pred CcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCC
Q 004954 639 IDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 718 (722)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf 718 (722)
+|... ..... ....+..+..|+.+|..||+.||++||||+++|+|+||
T Consensus 249 pp~~~-t~~~~-------------------------------~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FF 296 (516)
T KOG0582|consen 249 PPTLL-TSGLD-------------------------------KDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFF 296 (516)
T ss_pred CCCcc-cccCC-------------------------------hHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHH
Confidence 22111 11000 00112233469999999999999999999999999999
Q ss_pred CCC
Q 004954 719 QHP 721 (722)
Q Consensus 719 ~~~ 721 (722)
++.
T Consensus 297 k~~ 299 (516)
T KOG0582|consen 297 KKA 299 (516)
T ss_pred hhc
Confidence 863
No 36
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=1.3e-40 Score=350.87 Aligned_cols=278 Identities=27% Similarity=0.428 Sum_probs=218.9
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec---
Q 004954 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL--- 488 (722)
Q Consensus 415 rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~---~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~--- 488 (722)
+|++.+.||+|+||+||+|+++.+++.||+|+++... .......+|+.+++.++. ..||||+++++++...
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~---~~h~ni~~~~~~~~~~~~~ 77 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEA---FDHPNIVRLMDVCATSRTD 77 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhh---cCCCCeeeeeeeeccccCC
Confidence 5899999999999999999999999999999987532 122345678888888764 3589999999998742
Q ss_pred --CeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEe
Q 004954 489 --EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIID 566 (722)
Q Consensus 489 --~~l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~D 566 (722)
...++||||+.+++.+++..... ..+++..++.++.||+.||.|||+.||+||||||+|||++. ++.+||+|
T Consensus 78 ~~~~~~lv~e~~~~~l~~~~~~~~~----~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~--~~~~kl~d 151 (288)
T cd07863 78 RETKVTLVFEHVDQDLRTYLDKVPP----PGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTS--GGQVKLAD 151 (288)
T ss_pred CCceEEEEEcccccCHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECC--CCCEEECc
Confidence 46899999999988887764322 23899999999999999999999999999999999999985 78899999
Q ss_pred cCCcccccCC--ccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHH
Q 004954 567 LGSSCFQTDN--LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEML 644 (722)
Q Consensus 567 FGls~~~~~~--~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~ 644 (722)
||++...... .....+++.|+|||++.+..++.++|||||||++|+|++|.+||.+....+.+.++....+.+....+
T Consensus 152 fg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 231 (288)
T cd07863 152 FGLARIYSCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDW 231 (288)
T ss_pred cCccccccCcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhC
Confidence 9998765433 23356789999999999989999999999999999999999999998888888888877776554443
Q ss_pred hhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCC
Q 004954 645 MQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 718 (722)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf 718 (722)
........ ...... ....+.......+..+.+||.+||+.||++|||+.|+|.||||
T Consensus 232 ~~~~~~~~---------------~~~~~~--~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~f 288 (288)
T cd07863 232 PRDVTLPR---------------GAFSPR--GPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF 288 (288)
T ss_pred cccccccc---------------cccCCC--CCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 32111000 000000 0011112222345678999999999999999999999999998
No 37
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=4.6e-41 Score=356.84 Aligned_cols=249 Identities=26% Similarity=0.389 Sum_probs=209.8
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~----~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (722)
++|++.+.||+|+||.||+|.+..+|+.||+|++.... .....+.+|+.+++.++ ||||+++++++.+..
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~------hp~iv~~~~~~~~~~ 74 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVS------HPFIIRLFWTEHDQR 74 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCC------CCcHhhhHhhhccCC
Confidence 47999999999999999999999999999999987532 23345667888887774 789999999999999
Q ss_pred eEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecC
Q 004954 490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (722)
Q Consensus 490 ~l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFG 568 (722)
..++||||+.+ +|.+++.... .+++..+..++.||+.||+|||++||+||||||+|||++. ++.+||+|||
T Consensus 75 ~~~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~--~~~~kl~Dfg 146 (291)
T cd05612 75 FLYMLMEYVPGGELFSYLRNSG------RFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDK--EGHIKLTDFG 146 (291)
T ss_pred eEEEEEeCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECC--CCCEEEEecC
Confidence 99999999975 6777765432 2889999999999999999999999999999999999985 7889999999
Q ss_pred CcccccCCccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhh
Q 004954 569 SSCFQTDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQ 648 (722)
Q Consensus 569 ls~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~ 648 (722)
++...........|++.|+|||++.+..++.++|||||||++|+|++|+.||.+.+.......+....
T Consensus 147 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~------------ 214 (291)
T cd05612 147 FAKKLRDRTWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGK------------ 214 (291)
T ss_pred cchhccCCcccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC------------
Confidence 99877665556689999999999999999999999999999999999999998877666665553210
Q ss_pred hhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcC-----HHHHHhCCCCCC
Q 004954 649 EIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPT-----AREALDHPWLQH 720 (722)
Q Consensus 649 ~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpT-----a~ElL~HPwf~~ 720 (722)
..+|. ..+..+++||++||+.||.+|++ ++++++||||+.
T Consensus 215 -----------------------~~~~~---------~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~ 259 (291)
T cd05612 215 -----------------------LEFPR---------HLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKS 259 (291)
T ss_pred -----------------------cCCCc---------cCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccC
Confidence 01111 12456889999999999999995 999999999975
No 38
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.1e-42 Score=373.83 Aligned_cols=251 Identities=27% Similarity=0.464 Sum_probs=212.3
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchh-hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEE
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD-FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF 492 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~-~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~ 492 (722)
..|...++||+|+.|.||.|....+++.||||.+..... ..+-+++|+.+|+.++ |+|||++++.|...+.+|
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~------H~NiVnfl~Sylv~deLW 346 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLH------HPNIVNFLDSYLVGDELW 346 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhcc------chHHHHHHHHhcccceeE
Confidence 468888999999999999999999999999999876443 2356779999999886 679999999999999999
Q ss_pred EEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCcc
Q 004954 493 IVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 571 (722)
Q Consensus 493 iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~ 571 (722)
+|||||+| +|.+.+.... +++.++..|++.++.||+|||.+||+|||||.+|||++. ++.+||+|||++.
T Consensus 347 VVMEym~ggsLTDvVt~~~-------~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~--~g~vKltDFGFca 417 (550)
T KOG0578|consen 347 VVMEYMEGGSLTDVVTKTR-------MTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTM--DGSVKLTDFGFCA 417 (550)
T ss_pred EEEeecCCCchhhhhhccc-------ccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEecc--CCcEEEeeeeeee
Confidence 99999986 5655555332 889999999999999999999999999999999999996 7889999999987
Q ss_pred cccC---CccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhh
Q 004954 572 FQTD---NLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQ 648 (722)
Q Consensus 572 ~~~~---~~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~ 648 (722)
+... ...+.+|||.|||||++....|+.++||||||++++||+.|++||-+.++..-+..|. ..|.++.
T Consensus 418 qi~~~~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa-~ng~P~l------- 489 (550)
T KOG0578|consen 418 QISEEQSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIA-TNGTPKL------- 489 (550)
T ss_pred ccccccCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHh-hcCCCCc-------
Confidence 6543 3566899999999999999999999999999999999999999998766655444442 2222111
Q ss_pred hhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCCC
Q 004954 649 EIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 720 (722)
Q Consensus 649 ~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~~ 720 (722)
......+.+|++||.+||+.||.+|++|.|||+||||+.
T Consensus 490 ---------------------------------k~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl~~ 528 (550)
T KOG0578|consen 490 ---------------------------------KNPEKLSPELKDFLDRCLVVDVEQRASAKELLEHPFLKM 528 (550)
T ss_pred ---------------------------------CCccccCHHHHHHHHHHhhcchhcCCCHHHHhcChhhhh
Confidence 111234577999999999999999999999999999964
No 39
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-43 Score=346.23 Aligned_cols=259 Identities=29% Similarity=0.438 Sum_probs=219.4
Q ss_pred ceecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEE
Q 004954 410 TVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY 486 (722)
Q Consensus 410 ~~l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~---~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~ 486 (722)
..+.+.|.+.+.||+|.|+.|+++.+..+|+.+|+|++... ....+++.+|++|-+.|+ ||||+++.+.+.
T Consensus 7 ~~f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~Lq------HP~IvrL~~ti~ 80 (355)
T KOG0033|consen 7 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ------HPNIVRLHDSIQ 80 (355)
T ss_pred cccchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcC------CCcEeehhhhhc
Confidence 35678899999999999999999999999999999998642 335577888999888886 789999999999
Q ss_pred ecCeEEEEEEccccc-hHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccC-CCeEEE
Q 004954 487 HLEHLFIVCELLRAN-LYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQ-RCEIKI 564 (722)
Q Consensus 487 ~~~~l~iVmEy~~gs-Ll~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~-~~~vkL 564 (722)
.....|||+|+|.|+ |..-+... ..+++..+..+++||++||.|+|.+||||||+||.|+|+-+.. ..-+||
T Consensus 81 ~~~~~ylvFe~m~G~dl~~eIV~R------~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL 154 (355)
T KOG0033|consen 81 EESFHYLVFDLVTGGELFEDIVAR------EFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKL 154 (355)
T ss_pred ccceeEEEEecccchHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceee
Confidence 999999999999875 44444333 2388888999999999999999999999999999999997533 346999
Q ss_pred EecCCcccccCC--ccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHH
Q 004954 565 IDLGSSCFQTDN--LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLE 642 (722)
Q Consensus 565 ~DFGls~~~~~~--~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~ 642 (722)
+|||++....+. ...++|||.|+|||++...+|+..+|||+.|||||-||.|.+||.+.+...++++|++..-..|..
T Consensus 155 ~~FGvAi~l~~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~ 234 (355)
T KOG0033|consen 155 ADFGLAIEVNDGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSP 234 (355)
T ss_pred cccceEEEeCCccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCc
Confidence 999999887644 345789999999999999999999999999999999999999999999999999987543332221
Q ss_pred HHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCCC
Q 004954 643 MLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 720 (722)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~~ 720 (722)
.| . ..+++.++||++||..||.+|+|+.|+|+|||+.+
T Consensus 235 ~w---------------------------------~-------~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~ 272 (355)
T KOG0033|consen 235 EW---------------------------------D-------TVTPEAKSLIRRMLTVNPKKRITADEALKHPWICN 272 (355)
T ss_pred cc---------------------------------C-------cCCHHHHHHHHHHhccChhhhccHHHHhCCchhcc
Confidence 11 1 12467899999999999999999999999999975
No 40
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=2e-40 Score=363.15 Aligned_cols=290 Identities=31% Similarity=0.516 Sum_probs=223.8
Q ss_pred ecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec
Q 004954 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 488 (722)
Q Consensus 412 l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~---~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~ 488 (722)
+.++|++.+.||+|+||.||++.+..+++.||||++... ........+|+.+++.++ ||||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~------h~~ii~~~~~~~~~ 95 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN------HKNIIGLLNVFTPQ 95 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcC------CCCccccceeeccc
Confidence 468999999999999999999999999999999998753 223345667887777664 78999999988644
Q ss_pred ------CeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeE
Q 004954 489 ------EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI 562 (722)
Q Consensus 489 ------~~l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~v 562 (722)
...++||||+.+++...+.. .++...+..++.||+.||+|||++||+||||||+|||++. ++.+
T Consensus 96 ~~~~~~~~~~lv~e~~~~~l~~~~~~--------~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~--~~~~ 165 (364)
T cd07875 96 KSLEEFQDVYIVMELMDANLCQVIQM--------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTL 165 (364)
T ss_pred ccccccCeEEEEEeCCCCCHHHHHHh--------cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECC--CCcE
Confidence 35799999999988876642 1778899999999999999999999999999999999986 7889
Q ss_pred EEEecCCcccccCCc--cccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCc
Q 004954 563 KIIDLGSSCFQTDNL--CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPID 640 (722)
Q Consensus 563 kL~DFGls~~~~~~~--~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~ 640 (722)
||+|||++....... ....+|+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+.+..++..++.+.
T Consensus 166 kL~DfG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~ 245 (364)
T cd07875 166 KILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPC 245 (364)
T ss_pred EEEeCCCccccCCCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCC
Confidence 999999997654432 335789999999999999999999999999999999999999999998899999988888877
Q ss_pred HHHHhhhhhhhhhhcccccchhhhh-ccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCC
Q 004954 641 LEMLMQGQEIYKYFTKEYDLYYINE-ETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQ 719 (722)
Q Consensus 641 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~ 719 (722)
.+.+..................... .........+.. .......+..+++||.+||+.||.+|||+.|+|+||||+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~ 322 (364)
T cd07875 246 PEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPAD---SEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322 (364)
T ss_pred HHHHHhhhHHHHHHHhhCCCcCCCChHhhCcccccccc---ccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCcccc
Confidence 6665554433222111111000000 000000000100 011112345689999999999999999999999999997
Q ss_pred C
Q 004954 720 H 720 (722)
Q Consensus 720 ~ 720 (722)
.
T Consensus 323 ~ 323 (364)
T cd07875 323 V 323 (364)
T ss_pred c
Confidence 4
No 41
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.1e-40 Score=369.59 Aligned_cols=280 Identities=23% Similarity=0.324 Sum_probs=216.2
Q ss_pred ecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 004954 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (722)
Q Consensus 412 l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (722)
...+|++++.||+|+||.||++.+..+++.||+|.... ....+|+++++.++ ||||++++++|......
T Consensus 90 ~~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~-----~~~~~E~~il~~l~------HpnIv~~~~~~~~~~~~ 158 (391)
T PHA03212 90 EKAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR-----GGTATEAHILRAIN------HPSIIQLKGTFTYNKFT 158 (391)
T ss_pred ccCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh-----hhhHHHHHHHHhCC------CCCCCCEeEEEEECCee
Confidence 34679999999999999999999999999999997542 34678999998885 78999999999999999
Q ss_pred EEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCcc
Q 004954 492 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 571 (722)
Q Consensus 492 ~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~ 571 (722)
++|||++.++|..++.... .+++..++.++.||+.||.|||+.||+||||||+|||++. ++.+||+|||++.
T Consensus 159 ~lv~e~~~~~L~~~l~~~~------~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~--~~~vkL~DFG~a~ 230 (391)
T PHA03212 159 CLILPRYKTDLYCYLAAKR------NIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINH--PGDVCLGDFGAAC 230 (391)
T ss_pred EEEEecCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcC--CCCEEEEeCCccc
Confidence 9999999988887775432 2789999999999999999999999999999999999985 7889999999986
Q ss_pred cccC----CccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC-------hHHHHHHHHHhhcCCCc
Q 004954 572 FQTD----NLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPND-------AVVMILARIIGMLGPID 640 (722)
Q Consensus 572 ~~~~----~~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~-------~~~e~l~~i~~~lg~~~ 640 (722)
.... ......||+.|+|||++.+..++.++|||||||++|+|++|..||-.. .....+..++...|..|
T Consensus 231 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p 310 (391)
T PHA03212 231 FPVDINANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHP 310 (391)
T ss_pred ccccccccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCCh
Confidence 5332 223357899999999999999999999999999999999999887432 23456677777777766
Q ss_pred HHHHhhhhh-hhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCC
Q 004954 641 LEMLMQGQE-IYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQ 719 (722)
Q Consensus 641 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~ 719 (722)
.+....... ....+.. .. ......|............+.++.+||.+||++||.+||||+|+|+||||+
T Consensus 311 ~~~~~~~~~~~~~~~~~------~~----~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~ 380 (391)
T PHA03212 311 NEFPIDAQANLDEIYIG------LA----KKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQ 380 (391)
T ss_pred hhcCcchhHHHHHHHHH------HH----hccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhc
Confidence 543221111 1110000 00 000001111111111122345789999999999999999999999999997
Q ss_pred C
Q 004954 720 H 720 (722)
Q Consensus 720 ~ 720 (722)
.
T Consensus 381 ~ 381 (391)
T PHA03212 381 D 381 (391)
T ss_pred c
Confidence 6
No 42
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=9.6e-41 Score=361.10 Aligned_cols=250 Identities=24% Similarity=0.385 Sum_probs=211.0
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec
Q 004954 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 488 (722)
Q Consensus 413 ~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~----~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~ 488 (722)
.++|++.+.||+|+||.||+|++..+++.||+|+++... ...+.+.+|+.+++.++ ||||+++++++...
T Consensus 17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~------hp~iv~~~~~~~~~ 90 (329)
T PTZ00263 17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELS------HPFIVNMMCSFQDE 90 (329)
T ss_pred chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCC------CCCCCcEEEEEEcC
Confidence 468999999999999999999999999999999997542 23345677888888774 78999999999999
Q ss_pred CeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEec
Q 004954 489 EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDL 567 (722)
Q Consensus 489 ~~l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DF 567 (722)
+..++||||+.+ +|.+.+.... .+++..++.++.||+.||+|||++||+||||||+|||++. ++.+||+||
T Consensus 91 ~~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~--~~~~kl~Df 162 (329)
T PTZ00263 91 NRVYFLLEFVVGGELFTHLRKAG------RFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDN--KGHVKVTDF 162 (329)
T ss_pred CEEEEEEcCCCCChHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECC--CCCEEEeec
Confidence 999999999975 6766665332 2788999999999999999999999999999999999986 788999999
Q ss_pred CCcccccCCccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 004954 568 GSSCFQTDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 647 (722)
Q Consensus 568 Gls~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~ 647 (722)
|++...........||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+....+..+....
T Consensus 163 g~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~----------- 231 (329)
T PTZ00263 163 GFAKKVPDRTFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGR----------- 231 (329)
T ss_pred cCceEcCCCcceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcCC-----------
Confidence 999877666666789999999999999999999999999999999999999998877665555543110
Q ss_pred hhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcC-----HHHHHhCCCCCC
Q 004954 648 QEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPT-----AREALDHPWLQH 720 (722)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpT-----a~ElL~HPwf~~ 720 (722)
..+|. ..+..+.+||++||+.||.+|++ ++++++||||++
T Consensus 232 ------------------------~~~p~---------~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~ 276 (329)
T PTZ00263 232 ------------------------LKFPN---------WFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHG 276 (329)
T ss_pred ------------------------cCCCC---------CCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCC
Confidence 01111 12456889999999999999997 799999999975
No 43
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=7.3e-42 Score=369.64 Aligned_cols=250 Identities=28% Similarity=0.484 Sum_probs=219.4
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCe
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 490 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~---~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~ 490 (722)
++|.+.+.||+|.||.||+|+.+.+.+.||||.+.+.. .....+.+|++|++.++ ||||+.++++|++..+
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lk------Hpniv~m~esfEt~~~ 75 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLK------HPNIVEMLESFETSAH 75 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcC------CcchhhHHHhhcccce
Confidence 57889999999999999999999999999999986543 34566888999999886 6899999999999999
Q ss_pred EEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCc
Q 004954 491 LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (722)
Q Consensus 491 l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 570 (722)
+++|+||+.|+|..++..... ++++.++.|+.+++.||.|||+.+|+|||+||.|||+.. .+.+|++|||+|
T Consensus 76 ~~vVte~a~g~L~~il~~d~~------lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~--~~~~KlcdFg~A 147 (808)
T KOG0597|consen 76 LWVVTEYAVGDLFTILEQDGK------LPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEK--GGTLKLCDFGLA 147 (808)
T ss_pred EEEEehhhhhhHHHHHHhccC------CCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecC--CCceeechhhhh
Confidence 999999999999888876544 999999999999999999999999999999999999995 889999999999
Q ss_pred ccccCC---ccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 004954 571 CFQTDN---LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 647 (722)
Q Consensus 571 ~~~~~~---~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~ 647 (722)
+..... .+...|||.|||||.+.+.+|+..+|+||||||+||+++|++||-..+..++...|..-..++|.
T Consensus 148 r~m~~~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v~~p~------ 221 (808)
T KOG0597|consen 148 RAMSTNTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDPVKPPS------ 221 (808)
T ss_pred hhcccCceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCCCCcc------
Confidence 876654 34468999999999999999999999999999999999999999988888877777532211111
Q ss_pred hhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCCCC
Q 004954 648 QEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQHP 721 (722)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~~~ 721 (722)
..+..|++||..+|..||.+|.|..+++.|||.+..
T Consensus 222 --------------------------------------~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~~ 257 (808)
T KOG0597|consen 222 --------------------------------------TASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFWKGK 257 (808)
T ss_pred --------------------------------------cccHHHHHHHHHHhhcChhhcccHHHHhcChHHhhh
Confidence 234679999999999999999999999999998653
No 44
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=2.4e-40 Score=363.78 Aligned_cols=279 Identities=28% Similarity=0.468 Sum_probs=221.4
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC--
Q 004954 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE-- 489 (722)
Q Consensus 415 rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~---~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~-- 489 (722)
.|++.+.||+|+||+||++.+..+|+.||||++... .....++.+|+.+++.++ |+||+++++++...+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~------h~niv~~~~~~~~~~~~ 74 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFK------HDNVLSALDILQPPHID 74 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCC------CCCcCCHhheecCCCcc
Confidence 378899999999999999999999999999998643 223356677888888775 689999999998776
Q ss_pred ---eEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEe
Q 004954 490 ---HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIID 566 (722)
Q Consensus 490 ---~l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~D 566 (722)
+.++||||+.++|...+.... .+++..++.++.||+.||.|||+.||+||||||+|||++. ++.+||+|
T Consensus 75 ~~~~~~lv~e~~~~~l~~~~~~~~------~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~--~~~~kL~D 146 (372)
T cd07853 75 PFEEIYVVTELMQSDLHKIIVSPQ------PLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNS--NCVLKICD 146 (372)
T ss_pred ccceEEEEeeccccCHHHHHhcCC------CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECC--CCCEEecc
Confidence 899999999988877765322 3889999999999999999999999999999999999996 78999999
Q ss_pred cCCcccccCC----ccccccCCcccCchhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcH
Q 004954 567 LGSSCFQTDN----LCLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDL 641 (722)
Q Consensus 567 FGls~~~~~~----~~~~~gt~~y~APE~l~~~-~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~ 641 (722)
||++...... .....+++.|+|||++.+. .++.++|||||||++|+|++|+.||.+.+..+.+..+...+|.++.
T Consensus 147 fg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~ 226 (372)
T cd07853 147 FGLARVEEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSL 226 (372)
T ss_pred ccceeecccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCH
Confidence 9998754322 2234678899999999874 4789999999999999999999999999999999999999998877
Q ss_pred HHHhhhhh-hhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCCC
Q 004954 642 EMLMQGQE-IYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 720 (722)
Q Consensus 642 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~~ 720 (722)
+.+..... ..+++... ....|....+.......++.+.+||.+||+.||.+|||+.|+|+||||+.
T Consensus 227 ~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~ 293 (372)
T cd07853 227 EAMRSACEGARAHILRG-------------PHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDE 293 (372)
T ss_pred HHHHHhhHHHHHHHHhC-------------CCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCC
Confidence 65544321 11111100 00011111111111233577899999999999999999999999999976
No 45
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-40 Score=362.12 Aligned_cols=260 Identities=33% Similarity=0.507 Sum_probs=224.0
Q ss_pred CceecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchh----hhHhHHHHHHHHHHhcccCCCCCCceeEEEEE
Q 004954 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD----FFDQSLDEIKLLKLVNKNDPADEHHILRLYDY 484 (722)
Q Consensus 409 ~~~l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~----~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~ 484 (722)
...+..+|.+.+.||+|.||.||+++++.+|+.+|+|++.+... ......+|+.+|+.+.. ||||++++++
T Consensus 30 ~~~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~-----hpniv~l~~~ 104 (382)
T KOG0032|consen 30 SEDIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSG-----HPNIVQLKDA 104 (382)
T ss_pred cccccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccC-----CCCEEEEEEE
Confidence 45567889999999999999999999999999999999976543 33578899999999974 7899999999
Q ss_pred EEecCeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCC--Ce
Q 004954 485 FYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQR--CE 561 (722)
Q Consensus 485 f~~~~~l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~--~~ 561 (722)
|.+...+++|||++.| .|.+.+... .+++..+..+++|++.|++|||+.||+||||||+|+|+..... +.
T Consensus 105 ~e~~~~~~lvmEL~~GGeLfd~i~~~-------~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ 177 (382)
T KOG0032|consen 105 FEDPDSVYLVMELCEGGELFDRIVKK-------HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGR 177 (382)
T ss_pred EEcCCeEEEEEEecCCchHHHHHHHc-------cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCc
Confidence 9999999999999985 677777654 1999999999999999999999999999999999999986543 58
Q ss_pred EEEEecCCcccccC--CccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCC
Q 004954 562 IKIIDLGSSCFQTD--NLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPI 639 (722)
Q Consensus 562 vkL~DFGls~~~~~--~~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~ 639 (722)
+|++|||++..... .....+||+.|+|||++.+.+|+..+||||+|+++|.|++|.+||.+.+......+|...-..+
T Consensus 178 ik~~DFGla~~~~~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f 257 (382)
T KOG0032|consen 178 IKLIDFGLAKFIKPGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDF 257 (382)
T ss_pred EEEeeCCCceEccCCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCC
Confidence 99999999988776 4566899999999999999999999999999999999999999999988877777665332222
Q ss_pred cHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCC
Q 004954 640 DLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQ 719 (722)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~ 719 (722)
+.++| ...+..+++||++||..||.+|+||.++|+|||++
T Consensus 258 ~~~~w----------------------------------------~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~ 297 (382)
T KOG0032|consen 258 TSEPW----------------------------------------DDISESAKDFIRKLLEFDPRKRLTAAQALQHPWIK 297 (382)
T ss_pred CCCCc----------------------------------------cccCHHHHHHHHHhcccCcccCCCHHHHhcCcccc
Confidence 21111 11245688999999999999999999999999998
Q ss_pred C
Q 004954 720 H 720 (722)
Q Consensus 720 ~ 720 (722)
.
T Consensus 298 ~ 298 (382)
T KOG0032|consen 298 S 298 (382)
T ss_pred C
Confidence 5
No 46
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=4.3e-40 Score=357.32 Aligned_cols=279 Identities=32% Similarity=0.578 Sum_probs=222.2
Q ss_pred ecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec
Q 004954 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 488 (722)
Q Consensus 412 l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~---~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~ 488 (722)
+.++|++++.||+|+||+||+|.+..+++.||||++.... .......+|+.+++.++ |+||+++++++...
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~~~ 86 (343)
T cd07878 13 VPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMK------HENVIGLLDVFTPA 86 (343)
T ss_pred hhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcC------CCchhhhhhhhccc
Confidence 3578999999999999999999999999999999987532 22345667888888775 67999999988643
Q ss_pred ------CeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeE
Q 004954 489 ------EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI 562 (722)
Q Consensus 489 ------~~l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~v 562 (722)
...+++|+++.++|..++... .+++..++.++.||+.||.|||+.||+||||||+|||++. ++.+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~l~~~~~~~-------~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~--~~~~ 157 (343)
T cd07878 87 TSIENFNEVYLVTNLMGADLNNIVKCQ-------KLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNE--DCEL 157 (343)
T ss_pred ccccccCcEEEEeecCCCCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECC--CCCE
Confidence 457999999988887665421 2899999999999999999999999999999999999986 7889
Q ss_pred EEEecCCcccccCCccccccCCcccCchhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcH
Q 004954 563 KIIDLGSSCFQTDNLCLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDL 641 (722)
Q Consensus 563 kL~DFGls~~~~~~~~~~~gt~~y~APE~l~~-~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~ 641 (722)
||+|||++...........+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.+..+....+.++.
T Consensus 158 kl~Dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 237 (343)
T cd07878 158 RILDFGLARQADDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSP 237 (343)
T ss_pred EEcCCccceecCCCcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCH
Confidence 99999999877666666789999999999987 56889999999999999999999999998888888888887777766
Q ss_pred HHHhhhhhh--hhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCC
Q 004954 642 EMLMQGQEI--YKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQ 719 (722)
Q Consensus 642 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~ 719 (722)
+.+...... ..+.. .+ ...+. ..+.......++.+.+||.+||+.||.+|||+.|+|+||||.
T Consensus 238 ~~~~~~~~~~~~~~~~-------------~~-~~~~~-~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~ 302 (343)
T cd07878 238 EVLKKISSEHARKYIQ-------------SL-PHMPQ-QDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFS 302 (343)
T ss_pred HHHHhcchhhHHHHhh-------------cc-ccccc-hhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchh
Confidence 554332110 00100 00 00111 112222233456788999999999999999999999999997
Q ss_pred C
Q 004954 720 H 720 (722)
Q Consensus 720 ~ 720 (722)
.
T Consensus 303 ~ 303 (343)
T cd07878 303 Q 303 (343)
T ss_pred c
Confidence 5
No 47
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=6.2e-40 Score=356.89 Aligned_cols=254 Identities=25% Similarity=0.419 Sum_probs=210.8
Q ss_pred CceecCcEEEEEEeccCCCCceEEEEECCCC-cEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEE
Q 004954 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTG-VDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYD 483 (722)
Q Consensus 409 ~~~l~~rY~i~~~LG~G~fG~Vy~a~d~~tg-~~vAvKil~~~~----~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~ 483 (722)
.....++|++.+.||+|+||.||+|.+..++ ..||+|++.... .....+.+|+.+++.++ ||||+++++
T Consensus 25 ~~~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~------hp~Iv~~~~ 98 (340)
T PTZ00426 25 NKMKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYIN------HPFCVNLYG 98 (340)
T ss_pred CCCChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCC------CCCCcceEE
Confidence 4455678999999999999999999876554 689999986532 23345667888888774 789999999
Q ss_pred EEEecCeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeE
Q 004954 484 YFYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI 562 (722)
Q Consensus 484 ~f~~~~~l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~v 562 (722)
++...+..++||||+.+ +|.+++.... .+++..+..++.||+.||.|||++||+||||||+|||++. ++.+
T Consensus 99 ~~~~~~~~~lv~Ey~~~g~L~~~i~~~~------~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~--~~~i 170 (340)
T PTZ00426 99 SFKDESYLYLVLEFVIGGEFFTFLRRNK------RFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDK--DGFI 170 (340)
T ss_pred EEEeCCEEEEEEeCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECC--CCCE
Confidence 99999999999999975 6766665432 2889999999999999999999999999999999999985 7899
Q ss_pred EEEecCCcccccCCccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHH
Q 004954 563 KIIDLGSSCFQTDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLE 642 (722)
Q Consensus 563 kL~DFGls~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~ 642 (722)
||+|||++...........||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+.......+.....
T Consensus 171 kL~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~----- 245 (340)
T PTZ00426 171 KMTDFGFAKVVDTRTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGII----- 245 (340)
T ss_pred EEecCCCCeecCCCcceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCC-----
Confidence 999999998766555667899999999999998899999999999999999999999988776665555432110
Q ss_pred HHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCc-----CHHHHHhCCC
Q 004954 643 MLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRP-----TAREALDHPW 717 (722)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRp-----Ta~ElL~HPw 717 (722)
.+|. ..+..+.+||++||+.||.+|+ +++++++|||
T Consensus 246 ------------------------------~~p~---------~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~ 286 (340)
T PTZ00426 246 ------------------------------YFPK---------FLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPW 286 (340)
T ss_pred ------------------------------CCCC---------CCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCC
Confidence 1111 1235678999999999999995 8999999999
Q ss_pred CCC
Q 004954 718 LQH 720 (722)
Q Consensus 718 f~~ 720 (722)
|++
T Consensus 287 f~~ 289 (340)
T PTZ00426 287 FGN 289 (340)
T ss_pred cCC
Confidence 975
No 48
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=7.9e-40 Score=353.98 Aligned_cols=257 Identities=25% Similarity=0.355 Sum_probs=210.8
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~----~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (722)
++|++++.||+|+||.||+|++..+++.||||+++... .....+.+|+.+++.++ ||||+++++++...+
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~------h~~iv~~~~~~~~~~ 74 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTK------SEWLVKLLYAFQDDE 74 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCC------CCCCccEEEEEEcCC
Confidence 47999999999999999999999999999999997542 22345666777777664 789999999999999
Q ss_pred eEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecC
Q 004954 490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (722)
Q Consensus 490 ~l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFG 568 (722)
..++||||+.+ +|.+++.... .+++..++.++.||+.||.|||+.||+||||||+|||++. ++.+||+|||
T Consensus 75 ~~~lv~e~~~g~~L~~~l~~~~------~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~--~~~~kL~Dfg 146 (333)
T cd05600 75 YLYLAMEYVPGGDFRTLLNNLG------VLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDA--SGHIKLTDFG 146 (333)
T ss_pred EEEEEEeCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECC--CCCEEEEeCc
Confidence 99999999975 6766665322 2889999999999999999999999999999999999986 7889999999
Q ss_pred CcccccCCccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhh
Q 004954 569 SSCFQTDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQ 648 (722)
Q Consensus 569 ls~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~ 648 (722)
++...........||+.|+|||++.+..++.++|||||||++|+|++|..||...+..+....+......+
T Consensus 147 ~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~--------- 217 (333)
T cd05600 147 LSKGIVTYANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETL--------- 217 (333)
T ss_pred CCcccccccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccc---------
Confidence 99876665556789999999999999999999999999999999999999998887766665543210000
Q ss_pred hhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCCC
Q 004954 649 EIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 720 (722)
Q Consensus 649 ~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~~ 720 (722)
. .|... ......+..+.+||.+||..+|.+||++.++++||||..
T Consensus 218 ----------------------~--~~~~~---~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~~~~ 262 (333)
T cd05600 218 ----------------------Q--RPVYD---DPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHPFFKE 262 (333)
T ss_pred ----------------------c--CCCCC---ccccccCHHHHHHHHHHhhChhhhcCCHHHHHhCcccCC
Confidence 0 00000 000123467889999999999999999999999999975
No 49
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=1.7e-39 Score=345.71 Aligned_cols=278 Identities=27% Similarity=0.419 Sum_probs=220.8
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~--~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (722)
++|++.+.||.|+||.||++.+..+++.||+|.++... .......+|+.+++.++ ||||+++++++...+..
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~------h~nI~~~~~~~~~~~~~ 79 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLK------HANIVTLHDIIHTEKSL 79 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcC------CCCcceEEEEEecCCeE
Confidence 67999999999999999999999999999999987532 22345667888888775 78999999999999999
Q ss_pred EEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCcc
Q 004954 492 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 571 (722)
Q Consensus 492 ~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~ 571 (722)
++||||+.++|..++..... .+++..++.++.||+.||.|||+.||+|+||||+||+++. ++.++|+|||++.
T Consensus 80 ~lv~e~~~~~l~~~l~~~~~-----~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~--~~~~kl~dfg~~~ 152 (301)
T cd07873 80 TLVFEYLDKDLKQYLDDCGN-----SINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINE--RGELKLADFGLAR 152 (301)
T ss_pred EEEEeccccCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECC--CCcEEECcCcchh
Confidence 99999999988887764322 2788999999999999999999999999999999999986 7889999999986
Q ss_pred cccCC---ccccccCCcccCchhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 004954 572 FQTDN---LCLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 647 (722)
Q Consensus 572 ~~~~~---~~~~~gt~~y~APE~l~~~-~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~ 647 (722)
..... .....+++.|+|||++.+. .++.++|||||||++|+|++|++||...+..+.+..+...++.+....+...
T Consensus 153 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (301)
T cd07873 153 AKSIPTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGI 232 (301)
T ss_pred ccCCCCCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhh
Confidence 54322 1224568899999998764 4788999999999999999999999998888888888888877666555432
Q ss_pred hhhhhhhcccccchhhhhccccccccCCc--cchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCCC
Q 004954 648 QEIYKYFTKEYDLYYINEETNQLEYIIPE--ESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 720 (722)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~~~~~~~~~ip~--~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~~ 720 (722)
.....+... ..|. ...+.......+..+.+||.+||+.||.+|||++|+|+||||+.
T Consensus 233 ~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~ 291 (301)
T cd07873 233 LSNEEFKSY----------------NYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHC 291 (301)
T ss_pred hcccccccc----------------ccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCccccc
Confidence 111111000 0010 00111122334567899999999999999999999999999974
No 50
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=1.4e-39 Score=348.78 Aligned_cols=287 Identities=25% Similarity=0.398 Sum_probs=210.6
Q ss_pred EEEeccCCCCceEEEEEC--CCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe--cCeEEEE
Q 004954 419 TEYLGSAAFSKVFQAQDL--HTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH--LEHLFIV 494 (722)
Q Consensus 419 ~~~LG~G~fG~Vy~a~d~--~tg~~vAvKil~~~~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~--~~~l~iV 494 (722)
.++||+|+||+||+|+++ .+++.+|+|.+..... .....+|+.+++.++ ||||+++++++.. ....++|
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~E~~~l~~l~------h~niv~~~~~~~~~~~~~~~lv 78 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI-SMSACREIALLRELK------HPNVISLQKVFLSHADRKVWLL 78 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC-cHHHHHHHHHHHhcC------CCCCcceeeeEecCCCcEEEEE
Confidence 357999999999999965 4678999999875432 245678999998885 7899999999864 4578999
Q ss_pred EEccccchHHHHhhhhccC---CCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcc--cCCCeEEEEecCC
Q 004954 495 CELLRANLYEFQKFNQESG---GEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKS--YQRCEIKIIDLGS 569 (722)
Q Consensus 495 mEy~~gsLl~~l~~~~~~~---~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~--~~~~~vkL~DFGl 569 (722)
|||+.+++.+++....... ....+++..++.++.||+.||.|||+.||+||||||+|||+.. ...+.+||+|||+
T Consensus 79 ~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~ 158 (317)
T cd07868 79 FDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGF 158 (317)
T ss_pred EeccCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCc
Confidence 9999999888776443211 1234889999999999999999999999999999999999953 2357899999999
Q ss_pred cccccCC------ccccccCCcccCchhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCChH---------HHHHHHHH
Q 004954 570 SCFQTDN------LCLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAV---------VMILARII 633 (722)
Q Consensus 570 s~~~~~~------~~~~~gt~~y~APE~l~~~-~~s~ksDIWSLGviL~elltG~~PF~~~~~---------~e~l~~i~ 633 (722)
+...... .....+|+.|+|||++.+. .++.++|||||||++|+|++|++||..... ...+..+.
T Consensus 159 a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~ 238 (317)
T cd07868 159 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIF 238 (317)
T ss_pred eeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHH
Confidence 9765432 2235779999999999874 589999999999999999999999965332 35667777
Q ss_pred hhcCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHH
Q 004954 634 GMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREAL 713 (722)
Q Consensus 634 ~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL 713 (722)
..+|.+....+.....+......... . . .......+....++......+..+.+||++||++||.+|||++|+|
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~---~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l 312 (317)
T cd07868 239 NVMGFPADKDWEDIKKMPEHSTLMKD-F--R---RNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAM 312 (317)
T ss_pred HhcCCCChHHhHHHhhccchhhhhhh-h--h---ccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHh
Confidence 77887766655543322111000000 0 0 0000000000011111223356788999999999999999999999
Q ss_pred hCCCC
Q 004954 714 DHPWL 718 (722)
Q Consensus 714 ~HPwf 718 (722)
+||||
T Consensus 313 ~hp~f 317 (317)
T cd07868 313 QDPYF 317 (317)
T ss_pred cCCCC
Confidence 99998
No 51
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-40 Score=353.31 Aligned_cols=256 Identities=26% Similarity=0.395 Sum_probs=210.7
Q ss_pred ceecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch---------------hhhHhHHHHHHHHHHhcccCCCC
Q 004954 410 TVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---------------DFFDQSLDEIKLLKLVNKNDPAD 474 (722)
Q Consensus 410 ~~l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~---------------~~~~~~~~E~~il~~L~~~~~~~ 474 (722)
....++|++++.||+|.||.|-+|++..+++.||||++.+.. ...++..+|+.||+++.
T Consensus 93 ~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~------ 166 (576)
T KOG0585|consen 93 RKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLH------ 166 (576)
T ss_pred ceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcC------
Confidence 345688999999999999999999999999999999986532 12357888999999986
Q ss_pred CCceeEEEEEEEec--CeEEEEEEccccchHHHHhhhhccCCCcc-cCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCc
Q 004954 475 EHHILRLYDYFYHL--EHLFIVCELLRANLYEFQKFNQESGGEAY-FTLGRLQVITRQCLEALEYLHSLGIIHCDLKPEN 551 (722)
Q Consensus 475 hpnIv~l~~~f~~~--~~l~iVmEy~~gsLl~~l~~~~~~~~~~~-ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~N 551 (722)
|||||+++.+..+. +.+|||+|||..+-.... ..... +++.+++.+++.++.||+|||.+|||||||||+|
T Consensus 167 H~nVV~LiEvLDDP~s~~~YlVley~s~G~v~w~------p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsN 240 (576)
T KOG0585|consen 167 HPNVVKLIEVLDDPESDKLYLVLEYCSKGEVKWC------PPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSN 240 (576)
T ss_pred CcCeeEEEEeecCcccCceEEEEEeccCCccccC------CCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhh
Confidence 67999999998765 689999999985432221 22223 8999999999999999999999999999999999
Q ss_pred eEEcccCCCeEEEEecCCcccccC--------CccccccCCcccCchhhcCCC----CCchhhHHHHHHHHHHHHhCCCC
Q 004954 552 ILIKSYQRCEIKIIDLGSSCFQTD--------NLCLYVQSRSYRAPEVIIGLP----YDQKIDLWSLGCILAELWTGEVL 619 (722)
Q Consensus 552 ILl~~~~~~~vkL~DFGls~~~~~--------~~~~~~gt~~y~APE~l~~~~----~s~ksDIWSLGviL~elltG~~P 619 (722)
+||+. ++++||+|||.+..... .....+|||.|+|||.+.+.. .+.+.||||+||+||.|+.|+.|
T Consensus 241 LLl~~--~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~P 318 (576)
T KOG0585|consen 241 LLLSS--DGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLP 318 (576)
T ss_pred eEEcC--CCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCC
Confidence 99996 79999999998875421 133468999999999998732 45789999999999999999999
Q ss_pred CCCChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhc
Q 004954 620 FPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLL 699 (722)
Q Consensus 620 F~~~~~~e~l~~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL 699 (722)
|-++...++..+|+...- .+|... ...+.+++||.+||
T Consensus 319 F~~~~~~~l~~KIvn~pL-----------------------------------~fP~~p-------e~~e~~kDli~~lL 356 (576)
T KOG0585|consen 319 FFDDFELELFDKIVNDPL-----------------------------------EFPENP-------EINEDLKDLIKRLL 356 (576)
T ss_pred cccchHHHHHHHHhcCcc-----------------------------------cCCCcc-------cccHHHHHHHHHHh
Confidence 999999898888863211 122211 12356899999999
Q ss_pred ccCCCCCcCHHHHHhCCCCCCC
Q 004954 700 EINPQRRPTAREALDHPWLQHP 721 (722)
Q Consensus 700 ~~dP~kRpTa~ElL~HPwf~~~ 721 (722)
++||.+|+++.++-.|||....
T Consensus 357 ~KdP~~Ri~l~~ik~Hpwvt~~ 378 (576)
T KOG0585|consen 357 EKDPEQRITLPDIKLHPWVTRD 378 (576)
T ss_pred hcChhheeehhhheecceeccC
Confidence 9999999999999999998753
No 52
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=6.1e-40 Score=353.79 Aligned_cols=243 Identities=25% Similarity=0.391 Sum_probs=199.6
Q ss_pred EEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEE
Q 004954 420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVC 495 (722)
Q Consensus 420 ~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~----~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~iVm 495 (722)
+.||+|+||.||++++..+|+.||||+++... .......+|+.+++.++ ||||+++++++...+.+++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~------hp~i~~~~~~~~~~~~~~lv~ 74 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTR------HPFLTALKYSFQTHDRLCFVM 74 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCC------CCCCCCEEEEEEcCCEEEEEE
Confidence 36999999999999999999999999997532 22345566777777664 789999999999999999999
Q ss_pred Ecccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCccccc
Q 004954 496 ELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT 574 (722)
Q Consensus 496 Ey~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~ 574 (722)
||+.+ +|.+.+.... .+++..++.++.||+.||+|||+.||+||||||+|||++. ++.+||+|||++....
T Consensus 75 e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~--~~~~kl~DfG~a~~~~ 146 (323)
T cd05571 75 EYANGGELFFHLSRER------VFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDK--DGHIKITDFGLCKEGI 146 (323)
T ss_pred eCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECC--CCCEEEeeCCCCcccc
Confidence 99985 5655554322 3889999999999999999999999999999999999986 7889999999986532
Q ss_pred ---CCccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhh
Q 004954 575 ---DNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIY 651 (722)
Q Consensus 575 ---~~~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~~~~ 651 (722)
......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+.......+....
T Consensus 147 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~--------------- 211 (323)
T cd05571 147 SDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEE--------------- 211 (323)
T ss_pred cCCCcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCC---------------
Confidence 22334678999999999999999999999999999999999999998776655554432110
Q ss_pred hhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCc-----CHHHHHhCCCCCC
Q 004954 652 KYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRP-----TAREALDHPWLQH 720 (722)
Q Consensus 652 ~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRp-----Ta~ElL~HPwf~~ 720 (722)
..+| ...+..+.+||++||+.||++|| ++.++++||||+.
T Consensus 212 --------------------~~~p---------~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~ 256 (323)
T cd05571 212 --------------------IRFP---------RTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFAS 256 (323)
T ss_pred --------------------CCCC---------CCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCC
Confidence 0111 12346688999999999999999 8999999999975
No 53
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-40 Score=352.11 Aligned_cols=254 Identities=29% Similarity=0.422 Sum_probs=203.0
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch-hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC--
Q 004954 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE-- 489 (722)
Q Consensus 413 ~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~-~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~-- 489 (722)
..+|...+.||+|+||+||++.+..+|...|||.+.... ...+.+.+|+++|..++ |||||++++......
T Consensus 16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~------~p~IV~~~G~~~~~~~~ 89 (313)
T KOG0198|consen 16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLN------HPNIVQYYGSSSSREND 89 (313)
T ss_pred cchhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCC------CCCEEeeCCccccccCe
Confidence 346888899999999999999999999999999887642 12456789999999996 679999999865555
Q ss_pred eEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecC
Q 004954 490 HLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (722)
Q Consensus 490 ~l~iVmEy~~-gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFG 568 (722)
.++|.|||+. |+|.+++..... .+++..++.+++||++||+|||++|||||||||+|||++.. ++.+||+|||
T Consensus 90 ~~~i~mEy~~~GsL~~~~~~~g~-----~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~-~~~~KlaDFG 163 (313)
T KOG0198|consen 90 EYNIFMEYAPGGSLSDLIKRYGG-----KLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPS-NGDVKLADFG 163 (313)
T ss_pred eeEeeeeccCCCcHHHHHHHcCC-----CCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCC-CCeEEeccCc
Confidence 6999999997 577777775543 29999999999999999999999999999999999999952 5799999999
Q ss_pred CcccccC------CccccccCCcccCchhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCC-hHHHHHHHHHhhcCCCc
Q 004954 569 SSCFQTD------NLCLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPND-AVVMILARIIGMLGPID 640 (722)
Q Consensus 569 ls~~~~~------~~~~~~gt~~y~APE~l~~~-~~s~ksDIWSLGviL~elltG~~PF~~~-~~~e~l~~i~~~lg~~~ 640 (722)
++..... ......||+.|||||++.+. ....++|||||||++.||+||++||... ...+.+..+.
T Consensus 164 ~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig------- 236 (313)
T KOG0198|consen 164 LAKKLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIG------- 236 (313)
T ss_pred cccccccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHh-------
Confidence 8876552 23347899999999999953 3345999999999999999999999763 2222221111
Q ss_pred HHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCCC
Q 004954 641 LEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 720 (722)
Q Consensus 641 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~~ 720 (722)
.......+|. ..+...++||++||+.||++||||+++|+|||++.
T Consensus 237 --------------------------~~~~~P~ip~---------~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~ 281 (313)
T KOG0198|consen 237 --------------------------REDSLPEIPD---------SLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQ 281 (313)
T ss_pred --------------------------ccCCCCCCCc---------ccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhc
Confidence 0000112222 24567889999999999999999999999999965
No 54
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=1.8e-39 Score=350.05 Aligned_cols=249 Identities=26% Similarity=0.410 Sum_probs=204.4
Q ss_pred EEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 004954 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (722)
Q Consensus 416 Y~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~----~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (722)
|++++.||+|+||.||++.+..+|+.||||+++... .....+.+|.+++..++ ...||||+++++++...++.
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~---~l~hp~i~~~~~~~~~~~~~ 77 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETAN---SERHPFLVNLFACFQTEDHV 77 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcc---ccCCCChhceeeEEEcCCEE
Confidence 789999999999999999999999999999997532 23345666777766654 34699999999999999999
Q ss_pred EEEEEccccc-hHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCc
Q 004954 492 FIVCELLRAN-LYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (722)
Q Consensus 492 ~iVmEy~~gs-Ll~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 570 (722)
++||||+.++ |...+.. ..+++..++.++.||+.||.|||+.||+||||||+|||++. ++.+||+|||++
T Consensus 78 ~lv~E~~~~~~L~~~~~~-------~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~--~~~~kL~Dfg~~ 148 (324)
T cd05589 78 CFVMEYAAGGDLMMHIHT-------DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDT--EGFVKIADFGLC 148 (324)
T ss_pred EEEEcCCCCCcHHHHhhc-------CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECC--CCcEEeCcccCC
Confidence 9999999865 4433321 13899999999999999999999999999999999999996 789999999987
Q ss_pred cccc---CCccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 004954 571 CFQT---DNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 647 (722)
Q Consensus 571 ~~~~---~~~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~ 647 (722)
.... ......+|++.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+.+..+.....
T Consensus 149 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~---------- 218 (324)
T cd05589 149 KEGMGFGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEV---------- 218 (324)
T ss_pred ccCCCCCCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC----------
Confidence 6432 223346789999999999999999999999999999999999999988776666555431100
Q ss_pred hhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCc-----CHHHHHhCCCCCC
Q 004954 648 QEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRP-----TAREALDHPWLQH 720 (722)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRp-----Ta~ElL~HPwf~~ 720 (722)
..| ...+..+.+||++||+.||.+|| ++.++++||||++
T Consensus 219 -------------------------~~p---------~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~ 262 (324)
T cd05589 219 -------------------------RYP---------RFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRD 262 (324)
T ss_pred -------------------------CCC---------CCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCC
Confidence 111 11245688999999999999999 7999999999975
No 55
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=2.5e-39 Score=354.75 Aligned_cols=252 Identities=22% Similarity=0.349 Sum_probs=203.0
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~----~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (722)
++|++++.||+|+||+||++++..+++.||||+++... .....+.+|+.+++.++ |++|+++++.+....
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~------~~~iv~~~~~~~~~~ 74 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEAD------SLWVVKMFYSFQDKL 74 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCC------CCCcceEEEEEecCC
Confidence 47999999999999999999999999999999997532 22345566777777664 789999999999999
Q ss_pred eEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecC
Q 004954 490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (722)
Q Consensus 490 ~l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFG 568 (722)
.+++||||+.| +|.+++.... .+++..++.++.||+.||+|||++||+||||||+|||++. ++.+||+|||
T Consensus 75 ~~~lv~E~~~gg~L~~~l~~~~------~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~--~~~vkL~DFG 146 (363)
T cd05628 75 NLYLIMEFLPGGDMMTLLMKKD------TLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDS--KGHVKLSDFG 146 (363)
T ss_pred eEEEEEcCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECC--CCCEEEeecc
Confidence 99999999975 6666665322 3889999999999999999999999999999999999986 7889999999
Q ss_pred CcccccCC--------------------------------------ccccccCCcccCchhhcCCCCCchhhHHHHHHHH
Q 004954 569 SSCFQTDN--------------------------------------LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCIL 610 (722)
Q Consensus 569 ls~~~~~~--------------------------------------~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL 610 (722)
++...... ....+||+.|+|||++.+..++.++|||||||++
T Consensus 147 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil 226 (363)
T cd05628 147 LCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIM 226 (363)
T ss_pred CcccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHH
Confidence 98643211 1234789999999999999999999999999999
Q ss_pred HHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHH
Q 004954 611 AELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAF 690 (722)
Q Consensus 611 ~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~ 690 (722)
|+|++|+.||.+.+..+.+.++...... ..+|... ..++.
T Consensus 227 ~ell~G~~Pf~~~~~~~~~~~i~~~~~~---------------------------------~~~p~~~-------~~s~~ 266 (363)
T cd05628 227 YEMLIGYPPFCSETPQETYKKVMNWKET---------------------------------LIFPPEV-------PISEK 266 (363)
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHcCcCc---------------------------------ccCCCcC-------CCCHH
Confidence 9999999999988777766665421110 1112111 12356
Q ss_pred HHHHHHHhcccCCC---CCcCHHHHHhCCCCCC
Q 004954 691 FIDFVRTLLEINPQ---RRPTAREALDHPWLQH 720 (722)
Q Consensus 691 l~dLL~~mL~~dP~---kRpTa~ElL~HPwf~~ 720 (722)
+++||.+|+. +|. .||+++|+++||||+.
T Consensus 267 ~~~li~~l~~-~~~~r~~r~~~~ei~~hp~f~~ 298 (363)
T cd05628 267 AKDLILRFCC-EWEHRIGAPGVEEIKTNPFFEG 298 (363)
T ss_pred HHHHHHHHcC-ChhhcCCCCCHHHHhCCCCCCC
Confidence 8899999875 444 4689999999999975
No 56
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=3.1e-39 Score=352.37 Aligned_cols=298 Identities=32% Similarity=0.540 Sum_probs=229.5
Q ss_pred CcceeeCc---eecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc---hhhhHhHHHHHHHHHHhcccCCCCCC
Q 004954 403 DLPIILNT---VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEH 476 (722)
Q Consensus 403 ~~pi~~~~---~l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~---~~~~~~~~~E~~il~~L~~~~~~~hp 476 (722)
.+|+..++ .+.++|++.+.||+|+||.||++.+..+|+.||||++... ........+|+.+++.++ |+
T Consensus 2 ~~~~~~~~~~~~~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~------h~ 75 (353)
T cd07850 2 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVN------HK 75 (353)
T ss_pred ceeecccchhhhhhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcC------CC
Confidence 35566665 4578999999999999999999999999999999998642 223345667888887774 78
Q ss_pred ceeEEEEEEEec------CeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCC
Q 004954 477 HILRLYDYFYHL------EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPE 550 (722)
Q Consensus 477 nIv~l~~~f~~~------~~l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~ 550 (722)
||++++++|... .+.++||||+.+++.+.+... ++...+..++.||+.||+|||+.||+||||||+
T Consensus 76 ~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~--------l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~ 147 (353)
T cd07850 76 NIIGLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQMD--------LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPS 147 (353)
T ss_pred CCcceeeeeccCCCccccCcEEEEEeccCCCHHHHHhhc--------CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHH
Confidence 999999998744 357999999999888776421 788899999999999999999999999999999
Q ss_pred ceEEcccCCCeEEEEecCCcccccCCc--cccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHH
Q 004954 551 NILIKSYQRCEIKIIDLGSSCFQTDNL--CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMI 628 (722)
Q Consensus 551 NILl~~~~~~~vkL~DFGls~~~~~~~--~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~ 628 (722)
||+++. ++.+||+|||++....... ....+++.|+|||++.+..++.++|||||||++|+|++|+.||...+....
T Consensus 148 Nil~~~--~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~ 225 (353)
T cd07850 148 NIVVKS--DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQ 225 (353)
T ss_pred HEEECC--CCCEEEccCccceeCCCCCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHH
Confidence 999986 7789999999997655432 234578899999999999999999999999999999999999999888888
Q ss_pred HHHHHhhcCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccc---hhhhhcccCcHHHHHHHHHhcccCCCC
Q 004954 629 LARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEES---SLEHHLQFSDAFFIDFVRTLLEINPQR 705 (722)
Q Consensus 629 l~~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~---~l~~~~~~~~~~l~dLL~~mL~~dP~k 705 (722)
...+...++.++.++..........+........ ...+....+... .........+..+++||.+||+.||++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~ 301 (353)
T cd07850 226 WNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYA----GYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEK 301 (353)
T ss_pred HHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCC----CcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhh
Confidence 8899888898887765554332222111111000 000011111100 000111233566889999999999999
Q ss_pred CcCHHHHHhCCCCCC
Q 004954 706 RPTAREALDHPWLQH 720 (722)
Q Consensus 706 RpTa~ElL~HPwf~~ 720 (722)
|||+.|+|+||||+.
T Consensus 302 R~t~~eiL~~~~~~~ 316 (353)
T cd07850 302 RISVDDALQHPYINV 316 (353)
T ss_pred CcCHHHHhcChhHhh
Confidence 999999999999974
No 57
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=2.5e-39 Score=340.44 Aligned_cols=276 Identities=31% Similarity=0.435 Sum_probs=219.4
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 004954 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (722)
Q Consensus 415 rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~---~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (722)
+|++.+.||+|+||.||+|++..+|+.+|+|.++... .......+|+.+++.++ |+||+++++++......
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~------h~~i~~~~~~~~~~~~~ 74 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELK------HKNIVRLYDVLHSDKKL 74 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcC------CCCeeeHHHHhccCCce
Confidence 6899999999999999999999999999999987532 12245667888888775 67999999999999999
Q ss_pred EEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCcc
Q 004954 492 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 571 (722)
Q Consensus 492 ~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~ 571 (722)
++|+||+.+++.+.+.... ..+++..++.++.||++||.|||+.||+|+||||+||+++. ++.++|+|||++.
T Consensus 75 ~lv~e~~~~~l~~~~~~~~-----~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~--~~~~~l~dfg~~~ 147 (284)
T cd07839 75 TLVFEYCDQDLKKYFDSCN-----GDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINK--NGELKLADFGLAR 147 (284)
T ss_pred EEEEecCCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcC--CCcEEECccchhh
Confidence 9999999998888765432 23899999999999999999999999999999999999996 7889999999987
Q ss_pred cccCC---ccccccCCcccCchhhcCC-CCCchhhHHHHHHHHHHHHhCCCC-CCCChHHHHHHHHHhhcCCCcHHHHhh
Q 004954 572 FQTDN---LCLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVL-FPNDAVVMILARIIGMLGPIDLEMLMQ 646 (722)
Q Consensus 572 ~~~~~---~~~~~gt~~y~APE~l~~~-~~s~ksDIWSLGviL~elltG~~P-F~~~~~~e~l~~i~~~lg~~~~~~~~~ 646 (722)
..... .....+++.|+|||++.+. .++.++|||||||++|+|++|..| |.+.+..+.+..+...++..+...+..
T Consensus 148 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (284)
T cd07839 148 AFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPG 227 (284)
T ss_pred ccCCCCCCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHH
Confidence 54432 2234568899999998775 478999999999999999998877 566777788888888888777665544
Q ss_pred hhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCC
Q 004954 647 GQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 718 (722)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf 718 (722)
......+. .....+....+.......+..+.+||++||+.||.+|||++++|+||||
T Consensus 228 ~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f 284 (284)
T cd07839 228 VSKLPDYK---------------PYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF 284 (284)
T ss_pred hhhccccc---------------ccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence 33222110 0011111112222333456788999999999999999999999999998
No 58
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=1.9e-39 Score=343.24 Aligned_cols=254 Identities=24% Similarity=0.286 Sum_probs=201.0
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCe
Q 004954 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 490 (722)
Q Consensus 415 rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~----~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~ 490 (722)
.|++.+.||+|+||+||++.+..+|+.||+|++.... .....+.+|+.+++.++ |++|+++++++...+.
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~------~~~iv~~~~~~~~~~~ 74 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVN------SRFVVSLAYAYETKDA 74 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcC------CCcEEEEEEEEccCCe
Confidence 3789999999999999999999999999999986532 12234567888888775 6799999999999999
Q ss_pred EEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCC
Q 004954 491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS 569 (722)
Q Consensus 491 l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGl 569 (722)
.++||||+.+ +|...+.... ...+++..+..++.||+.||+|||+.||+||||||+|||++. ++.++|+|||+
T Consensus 75 ~~lv~e~~~~g~L~~~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~--~~~~kl~Dfg~ 148 (285)
T cd05631 75 LCLVLTIMNGGDLKFHIYNMG----NPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDD--RGHIRISDLGL 148 (285)
T ss_pred EEEEEEecCCCcHHHHHHhhC----CCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECC--CCCEEEeeCCC
Confidence 9999999986 4544443221 123889999999999999999999999999999999999985 77899999999
Q ss_pred cccccCC--ccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 004954 570 SCFQTDN--LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 647 (722)
Q Consensus 570 s~~~~~~--~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~ 647 (722)
+...... .....||+.|+|||++.+..++.++|||||||++|+|++|+.||...........+.....
T Consensus 149 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~---------- 218 (285)
T cd05631 149 AVQIPEGETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVK---------- 218 (285)
T ss_pred cEEcCCCCeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhh----------
Confidence 8764332 2345789999999999999999999999999999999999999976543222211110000
Q ss_pred hhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcC-----HHHHHhCCCCCC
Q 004954 648 QEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPT-----AREALDHPWLQH 720 (722)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpT-----a~ElL~HPwf~~ 720 (722)
.....++ ...+..+.+||++||+.||.+||+ ++++++||||+.
T Consensus 219 ---------------------~~~~~~~---------~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~ 266 (285)
T cd05631 219 ---------------------EDQEEYS---------EKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKN 266 (285)
T ss_pred ---------------------cccccCC---------ccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcC
Confidence 0000011 123467889999999999999997 999999999975
No 59
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.8e-41 Score=340.12 Aligned_cols=245 Identities=27% Similarity=0.401 Sum_probs=204.7
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeec---chhhhHhHHHHHHHHHHhcccCCCCCCceeEEEE-EEEec
Q 004954 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKN---DKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYD-YFYHL 488 (722)
Q Consensus 413 ~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~---~~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~-~f~~~ 488 (722)
...|+|+++||+|.||+||+++++.+|..+|.|.++- +....+....|+.+|+.|+ |||||++++ .|...
T Consensus 18 l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~------HpNIVqYy~~~f~~~ 91 (375)
T KOG0591|consen 18 LADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLN------HPNIVQYYAHSFIED 91 (375)
T ss_pred HHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcC------CchHHHHHHHhhhcc
Confidence 3569999999999999999999999999999998863 3455677889999999997 689999999 55555
Q ss_pred Ce-EEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHH--CC--CccccCCCCceEEcccCCCeE
Q 004954 489 EH-LFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS--LG--IIHCDLKPENILIKSYQRCEI 562 (722)
Q Consensus 489 ~~-l~iVmEy~~-gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs--~g--IvHrDLKp~NILl~~~~~~~v 562 (722)
.. ++||||||. |+|...++..+. ....+++..+|.++.|++.||..+|+ .. |+||||||.||+++. +|.+
T Consensus 92 ~evlnivmE~c~~GDLsqmIk~~K~--qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~--~gvv 167 (375)
T KOG0591|consen 92 NEVLNIVMELCDAGDLSQMIKHFKK--QKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTA--NGVV 167 (375)
T ss_pred chhhHHHHHhhcccCHHHHHHHHHh--ccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcC--CCce
Confidence 44 899999998 566666665443 34569999999999999999999998 44 999999999999995 8999
Q ss_pred EEEecCCcccccCCc---cccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCC
Q 004954 563 KIIDLGSSCFQTDNL---CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPI 639 (722)
Q Consensus 563 kL~DFGls~~~~~~~---~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~ 639 (722)
||+|||+++...... ...+|||.||+||++.+.+|+.++|||||||++|||+.-++||.+.+..++..+|...--+
T Consensus 168 KLGDfGL~r~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~~- 246 (375)
T KOG0591|consen 168 KLGDFGLGRFLSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDYP- 246 (375)
T ss_pred eeccchhHhHhcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCCCC-
Confidence 999999999877653 4589999999999999999999999999999999999999999999888887777532110
Q ss_pred cHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCH
Q 004954 640 DLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTA 709 (722)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa 709 (722)
.+|. ...+..+..||.-|+..||..||+.
T Consensus 247 ---------------------------------~~p~--------~~YS~~l~~li~~ci~vd~~~RP~t 275 (375)
T KOG0591|consen 247 ---------------------------------PLPD--------EHYSTDLRELINMCIAVDPEQRPDT 275 (375)
T ss_pred ---------------------------------CCcH--------HHhhhHHHHHHHHHccCCcccCCCc
Confidence 0110 0123568899999999999999985
No 60
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=1.1e-38 Score=335.36 Aligned_cols=278 Identities=27% Similarity=0.435 Sum_probs=219.0
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 004954 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (722)
Q Consensus 415 rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~---~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (722)
+|++.+.||+|++|.||+|++..+++.||+|+++... .......+|+.+++.+. ||||+++++++......
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~~ 74 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQ------HPNIVCLQDVLMQESRL 74 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcC------CCCEeeeEEEEeeCCeE
Confidence 4889999999999999999999999999999986532 22345677888888775 78999999999999999
Q ss_pred EEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCcc
Q 004954 492 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 571 (722)
Q Consensus 492 ~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~ 571 (722)
++||||+.+++.+++..... ...+++..++.++.||+.||+|||+.||+|+||||+||+++. ++.++|+|||++.
T Consensus 75 ~~v~e~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~--~~~~~l~dfg~~~ 149 (285)
T cd07861 75 YLIFEFLSMDLKKYLDSLPK---GQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDN--KGVIKLADFGLAR 149 (285)
T ss_pred EEEEecCCCCHHHHHhcCCC---CCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcC--CCcEEECccccee
Confidence 99999999888877754321 234899999999999999999999999999999999999986 7889999999986
Q ss_pred cccCCc---cccccCCcccCchhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 004954 572 FQTDNL---CLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 647 (722)
Q Consensus 572 ~~~~~~---~~~~gt~~y~APE~l~~~-~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~ 647 (722)
...... ....+++.|+|||++.+. .++.++|||||||++|+|++|++||.+....+.+..+...++.+....+...
T Consensus 150 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (285)
T cd07861 150 AFGIPVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGV 229 (285)
T ss_pred ecCCCcccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcc
Confidence 543322 223568889999998754 4788999999999999999999999988877777777777776665555443
Q ss_pred hhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCC
Q 004954 648 QEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 718 (722)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf 718 (722)
.....+...... . ....+.......+.++.+||++||+.||.+|||+.+|++||||
T Consensus 230 ~~~~~~~~~~~~-------------~--~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~ 285 (285)
T cd07861 230 TSLPDYKNTFPK-------------W--KKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF 285 (285)
T ss_pred hhhHHHHhhccc-------------c--CcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence 333222110000 0 0001111122346778999999999999999999999999998
No 61
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=6.1e-39 Score=345.93 Aligned_cols=249 Identities=24% Similarity=0.378 Sum_probs=204.6
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCe
Q 004954 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 490 (722)
Q Consensus 415 rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~----~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~ 490 (722)
+|++++.||+|+||.||+|++..+++.||||+++... ........|.+++..+.+ |++|+++++++...+.
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~-----~~~i~~~~~~~~~~~~ 75 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGK-----PPFLTQLHSCFQTMDR 75 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCC-----CCceeeeEEEEEcCCE
Confidence 4899999999999999999999999999999997542 233456677777777653 3579999999999999
Q ss_pred EEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCC
Q 004954 491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS 569 (722)
Q Consensus 491 l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGl 569 (722)
+++||||+.+ +|...+.... .+++..++.++.||+.||.|||+.||+||||||+|||++. ++.+||+|||+
T Consensus 76 ~~lv~E~~~~g~L~~~~~~~~------~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~--~~~~kL~Dfg~ 147 (324)
T cd05587 76 LYFVMEYVNGGDLMYHIQQVG------KFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDA--EGHIKIADFGM 147 (324)
T ss_pred EEEEEcCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcC--CCCEEEeecCc
Confidence 9999999975 5665554322 2788999999999999999999999999999999999986 78899999998
Q ss_pred ccccc---CCccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhh
Q 004954 570 SCFQT---DNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQ 646 (722)
Q Consensus 570 s~~~~---~~~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~ 646 (722)
+.... ......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+.+..+.....
T Consensus 148 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~--------- 218 (324)
T cd05587 148 CKENIFGGKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNV--------- 218 (324)
T ss_pred ceecCCCCCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC---------
Confidence 86422 223345789999999999999999999999999999999999999988777666655542111
Q ss_pred hhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCH-----HHHHhCCCCCC
Q 004954 647 GQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTA-----REALDHPWLQH 720 (722)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa-----~ElL~HPwf~~ 720 (722)
.+|. ..+..+.+||++||+.||.+|+++ .++++||||+.
T Consensus 219 --------------------------~~~~---------~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~ 262 (324)
T cd05587 219 --------------------------SYPK---------SLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRR 262 (324)
T ss_pred --------------------------CCCC---------CCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCC
Confidence 1111 124568899999999999999976 89999999975
No 62
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=3e-39 Score=353.51 Aligned_cols=252 Identities=24% Similarity=0.385 Sum_probs=205.1
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~----~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (722)
++|++++.||+|+||+||++++..+|+.||||++.... .....+.+|+.+++.++ ||||++++++|...+
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~------h~~iv~~~~~~~~~~ 74 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEAD------NPWVVKLYYSFQDEN 74 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC------CCCCcceEEEEEcCC
Confidence 47999999999999999999999999999999997542 23344567888888775 789999999999999
Q ss_pred eEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecC
Q 004954 490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (722)
Q Consensus 490 ~l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFG 568 (722)
++++||||+.+ +|.+++.... .+++..++.++.||+.||+|||+.||+||||||+|||++. ++.++|+|||
T Consensus 75 ~~~lv~E~~~~g~L~~~l~~~~------~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~--~~~~kl~Dfg 146 (364)
T cd05599 75 YLYLIMEYLPGGDMMTLLMKKD------TFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDA--KGHIKLSDFG 146 (364)
T ss_pred eEEEEECCCCCcHHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECC--CCCEEEeecc
Confidence 99999999975 5666665322 2899999999999999999999999999999999999986 7889999999
Q ss_pred CcccccCC-----------------------------------------ccccccCCcccCchhhcCCCCCchhhHHHHH
Q 004954 569 SSCFQTDN-----------------------------------------LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLG 607 (722)
Q Consensus 569 ls~~~~~~-----------------------------------------~~~~~gt~~y~APE~l~~~~~s~ksDIWSLG 607 (722)
++...... ....+||+.|+|||++.+..++.++||||||
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG 226 (364)
T cd05599 147 LCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLG 226 (364)
T ss_pred cceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecch
Confidence 87543211 0123689999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccC
Q 004954 608 CILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFS 687 (722)
Q Consensus 608 viL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~ 687 (722)
|++|+|++|..||.+.+..+.+..+..... ...+|... ..
T Consensus 227 ~il~el~~G~~Pf~~~~~~~~~~~i~~~~~---------------------------------~~~~~~~~-------~~ 266 (364)
T cd05599 227 VIMYEMLVGYPPFCSDNPQETYRKIINWKE---------------------------------TLQFPDEV-------PL 266 (364)
T ss_pred hHHHHhhcCCCCCCCCCHHHHHHHHHcCCC---------------------------------ccCCCCCC-------CC
Confidence 999999999999988776665555431100 00111111 22
Q ss_pred cHHHHHHHHHhcccCCCCCcC---HHHHHhCCCCCC
Q 004954 688 DAFFIDFVRTLLEINPQRRPT---AREALDHPWLQH 720 (722)
Q Consensus 688 ~~~l~dLL~~mL~~dP~kRpT---a~ElL~HPwf~~ 720 (722)
++.+.+||++||. +|.+|++ +.++|+||||+.
T Consensus 267 s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~~~~ 301 (364)
T cd05599 267 SPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFFKG 301 (364)
T ss_pred CHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCCcCC
Confidence 4668899999997 9999998 999999999975
No 63
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=5.3e-39 Score=347.59 Aligned_cols=291 Identities=24% Similarity=0.284 Sum_probs=210.3
Q ss_pred ecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 004954 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (722)
Q Consensus 412 l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~--~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (722)
..++|++++.||+|+||.||++++..+|..+|+|++... ......+.+|+++++.++ ||||+++++++...+
T Consensus 3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~~~~ 76 (331)
T cd06649 3 KDDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECN------SPYIVGFYGAFYSDG 76 (331)
T ss_pred CcccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCC------CCCCCeEEEEEEECC
Confidence 357899999999999999999999999999999998754 233456778888888775 689999999999999
Q ss_pred eEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHC-CCccccCCCCceEEcccCCCeEEEEec
Q 004954 490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL-GIIHCDLKPENILIKSYQRCEIKIIDL 567 (722)
Q Consensus 490 ~l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~-gIvHrDLKp~NILl~~~~~~~vkL~DF 567 (722)
.+++||||+.+ +|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+|||++. ++.++|+||
T Consensus 77 ~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~--~~~~kl~Df 148 (331)
T cd06649 77 EISICMEHMDGGSLDQVLKEAK------RIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNS--RGEIKLCDF 148 (331)
T ss_pred EEEEEeecCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcC--CCcEEEccC
Confidence 99999999985 6666665322 288999999999999999999986 5999999999999986 788999999
Q ss_pred CCcccccCC-ccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhh
Q 004954 568 GSSCFQTDN-LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQ 646 (722)
Q Consensus 568 Gls~~~~~~-~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~ 646 (722)
|++...... .....+++.|+|||++.+..++.++|||||||++|+|++|+.||......++...+..............
T Consensus 149 g~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (331)
T cd06649 149 GVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHS 228 (331)
T ss_pred cccccccccccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccc
Confidence 998755432 3345789999999999999999999999999999999999999987665554332211100000000000
Q ss_pred hhhhhh----hhcccc-cc---hhhhhccc-cccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCC
Q 004954 647 GQEIYK----YFTKEY-DL---YYINEETN-QLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPW 717 (722)
Q Consensus 647 ~~~~~~----~~~~~~-~~---~~~~~~~~-~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPw 717 (722)
...... ...... .. ........ ......|.. .....+.++++||++||++||++|||+.++|+|||
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~ 303 (331)
T cd06649 229 ISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKL-----PNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTF 303 (331)
T ss_pred cCcccccccccccccccccccchhHHHHHHHHHhCCCcCC-----CCccccHHHHHHHHHHccCCcccCCCHHHHhcChH
Confidence 000000 000000 00 00000000 000000100 01124567999999999999999999999999999
Q ss_pred CCCC
Q 004954 718 LQHP 721 (722)
Q Consensus 718 f~~~ 721 (722)
|+..
T Consensus 304 ~~~~ 307 (331)
T cd06649 304 IKRS 307 (331)
T ss_pred Hhhc
Confidence 9753
No 64
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=1.9e-39 Score=352.47 Aligned_cols=252 Identities=29% Similarity=0.442 Sum_probs=207.9
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~----~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (722)
++|++.+.||+|+||+||+|++..+|+.||||+++... .....+..|+.++..++ |+||+++++++...+
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~------~~~i~~~~~~~~~~~ 74 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADAD------SPWIVKLYYSFQDEE 74 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcC------CCCccchhhheecCC
Confidence 47999999999999999999999999999999997542 23345667777777775 789999999999999
Q ss_pred eEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecC
Q 004954 490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (722)
Q Consensus 490 ~l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFG 568 (722)
++++||||+.+ +|.+++... ..+++..++.++.||+.||+|||+.||+||||||+|||++. ++.+||+|||
T Consensus 75 ~~~lv~e~~~~~~L~~~l~~~------~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~--~~~~kL~Dfg 146 (350)
T cd05573 75 HLYLVMEYMPGGDLMNLLIRK------DVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDA--DGHIKLADFG 146 (350)
T ss_pred eEEEEEcCCCCCCHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECC--CCCEEeecCC
Confidence 99999999975 677766543 23889999999999999999999999999999999999986 7889999999
Q ss_pred CcccccCCc--------------------------------cccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhC
Q 004954 569 SSCFQTDNL--------------------------------CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616 (722)
Q Consensus 569 ls~~~~~~~--------------------------------~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG 616 (722)
++....... ....||+.|+|||++.+..++.++|||||||++|+|++|
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g 226 (350)
T cd05573 147 LCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYG 226 (350)
T ss_pred CCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccC
Confidence 987544322 235689999999999999999999999999999999999
Q ss_pred CCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHH
Q 004954 617 EVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVR 696 (722)
Q Consensus 617 ~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~ 696 (722)
+.||......+...++...... ..+|... ..++.+.+||.
T Consensus 227 ~~Pf~~~~~~~~~~~i~~~~~~---------------------------------~~~p~~~-------~~~~~~~~li~ 266 (350)
T cd05573 227 FPPFYSDTLQETYNKIINWKES---------------------------------LRFPPDP-------PVSPEAIDLIC 266 (350)
T ss_pred CCCCCCCCHHHHHHHHhccCCc---------------------------------ccCCCCC-------CCCHHHHHHHH
Confidence 9999887766655555421100 0111111 13467899999
Q ss_pred HhcccCCCCCcC-HHHHHhCCCCCC
Q 004954 697 TLLEINPQRRPT-AREALDHPWLQH 720 (722)
Q Consensus 697 ~mL~~dP~kRpT-a~ElL~HPwf~~ 720 (722)
+||+ ||.+|++ +.++|+||||+.
T Consensus 267 ~ll~-dp~~R~~s~~~ll~hp~~~~ 290 (350)
T cd05573 267 RLLC-DPEDRLGSFEEIKSHPFFKG 290 (350)
T ss_pred HHcc-ChhhcCCCHHHHhcCCCcCC
Confidence 9998 9999999 999999999975
No 65
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.9e-40 Score=331.07 Aligned_cols=253 Identities=30% Similarity=0.472 Sum_probs=211.1
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc---------hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEE
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---------KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDY 484 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~---------~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~ 484 (722)
+.|.-.+.||+|..++|.++.++.+|+.+|+|++... ....+....|+.||+++. +||+|+++.++
T Consensus 17 ~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~-----GHP~II~l~D~ 91 (411)
T KOG0599|consen 17 AKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVM-----GHPYIIDLQDV 91 (411)
T ss_pred hhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhc-----CCCcEEEeeee
Confidence 4577778899999999999999999999999998532 123455677899999986 68999999999
Q ss_pred EEecCeEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEE
Q 004954 485 FYHLEHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIK 563 (722)
Q Consensus 485 f~~~~~l~iVmEy~~-gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vk 563 (722)
|++...+++|+|.|+ |.|.+++...- .+++++.+.|++|+++|+.|||.++||||||||+|||++. +.++|
T Consensus 92 yes~sF~FlVFdl~prGELFDyLts~V------tlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILldd--n~~i~ 163 (411)
T KOG0599|consen 92 YESDAFVFLVFDLMPRGELFDYLTSKV------TLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDD--NMNIK 163 (411)
T ss_pred ccCcchhhhhhhhcccchHHHHhhhhe------eecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeecc--ccceE
Confidence 999999999999997 78988886433 3999999999999999999999999999999999999995 88999
Q ss_pred EEecCCcccccCC--ccccccCCcccCchhhcC------CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhh
Q 004954 564 IIDLGSSCFQTDN--LCLYVQSRSYRAPEVIIG------LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGM 635 (722)
Q Consensus 564 L~DFGls~~~~~~--~~~~~gt~~y~APE~l~~------~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~ 635 (722)
|+|||+++..... ....||||+|+|||.+.. ..|+..+|+|++|||||.|+.|.+||......-++..|+..
T Consensus 164 isDFGFa~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeG 243 (411)
T KOG0599|consen 164 ISDFGFACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEG 243 (411)
T ss_pred EeccceeeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhc
Confidence 9999999987654 556899999999999863 35899999999999999999999999877666666555532
Q ss_pred cCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhC
Q 004954 636 LGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 715 (722)
Q Consensus 636 lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~H 715 (722)
.=.+.. |+.... +...++||.+||+.||.+|.|++|+|.|
T Consensus 244 kyqF~s---------------------------------peWadi-------s~~~KdLIsrlLqVdp~~Ritake~LaH 283 (411)
T KOG0599|consen 244 KYQFRS---------------------------------PEWADI-------SATVKDLISRLLQVDPTKRITAKEALAH 283 (411)
T ss_pred ccccCC---------------------------------cchhhc-------cccHHHHHHHHHeeCchhcccHHHHhcC
Confidence 211111 111111 2446799999999999999999999999
Q ss_pred CCCC
Q 004954 716 PWLQ 719 (722)
Q Consensus 716 Pwf~ 719 (722)
|||+
T Consensus 284 pff~ 287 (411)
T KOG0599|consen 284 PFFI 287 (411)
T ss_pred hHHH
Confidence 9994
No 66
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=5.4e-39 Score=344.53 Aligned_cols=241 Identities=30% Similarity=0.454 Sum_probs=198.2
Q ss_pred eccCCCCceEEEEECCCCcEEEEEEeecc----hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEEEc
Q 004954 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCEL 497 (722)
Q Consensus 422 LG~G~fG~Vy~a~d~~tg~~vAvKil~~~----~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~iVmEy 497 (722)
||+|+||+||++++..+++.||+|+++.. ........+|+.+++.++ ||||+++++++...+..++||||
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~~~~~~~lv~e~ 74 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVN------CPFIVPLKFSFQSPEKLYLVLAF 74 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC------CCcEeceeeEEecCCeEEEEEcC
Confidence 79999999999999999999999998753 223345567777777664 78999999999999999999999
Q ss_pred ccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCcccccC-
Q 004954 498 LRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTD- 575 (722)
Q Consensus 498 ~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~~- 575 (722)
+.+ +|.+.+.... .+++..+..++.||+.||.|||++||+||||||+|||++. ++.++|+|||++.....
T Consensus 75 ~~~g~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~--~~~~kl~Dfg~~~~~~~~ 146 (312)
T cd05585 75 INGGELFHHLQREG------RFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDY--QGHIALCDFGLCKLNMKD 146 (312)
T ss_pred CCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECC--CCcEEEEECcccccCccC
Confidence 985 5666665322 2889999999999999999999999999999999999985 78899999999875322
Q ss_pred --CccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhhhh
Q 004954 576 --NLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKY 653 (722)
Q Consensus 576 --~~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~~~~~~ 653 (722)
.....+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+.+..+....
T Consensus 147 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~----------------- 209 (312)
T cd05585 147 DDKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEP----------------- 209 (312)
T ss_pred CCccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCC-----------------
Confidence 2234578999999999999999999999999999999999999998876665554443110
Q ss_pred hcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCc---CHHHHHhCCCCCC
Q 004954 654 FTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRP---TAREALDHPWLQH 720 (722)
Q Consensus 654 ~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRp---Ta~ElL~HPwf~~ 720 (722)
..+| ...++.+.+||.+||+.||.+|| ++.++|.||||+.
T Consensus 210 ------------------~~~~---------~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~~ 252 (312)
T cd05585 210 ------------------LRFP---------DGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQ 252 (312)
T ss_pred ------------------CCCC---------CcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcCCCcCC
Confidence 0111 12346688999999999999997 6899999999975
No 67
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=6e-39 Score=354.11 Aligned_cols=252 Identities=23% Similarity=0.330 Sum_probs=201.0
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCe
Q 004954 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 490 (722)
Q Consensus 415 rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~----~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~ 490 (722)
.|++++.||+|+||+||+|++..+++.||||++.... .....+.+|+.+++.++ |+||+++++++...++
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~------h~~iv~l~~~~~~~~~ 75 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEAD------NEWVVKLYYSFQDKDN 75 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcC------CCCeeeeEEEEecCCE
Confidence 6899999999999999999999999999999997532 23445677888887764 7899999999999999
Q ss_pred EEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCC
Q 004954 491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS 569 (722)
Q Consensus 491 l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGl 569 (722)
+++||||+.+ +|.+++.... .+++..++.++.||+.||.|||+.||+||||||+||||+. ++.+||+|||+
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~~------~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~--~~~~kL~DFGl 147 (381)
T cd05626 76 LYFVMDYIPGGDMMSLLIRME------VFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDL--DGHIKLTDFGL 147 (381)
T ss_pred EEEEEecCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECC--CCCEEEeeCcC
Confidence 9999999975 6666665322 2888999999999999999999999999999999999986 78899999998
Q ss_pred cccccC--------------------------------------------------CccccccCCcccCchhhcCCCCCc
Q 004954 570 SCFQTD--------------------------------------------------NLCLYVQSRSYRAPEVIIGLPYDQ 599 (722)
Q Consensus 570 s~~~~~--------------------------------------------------~~~~~~gt~~y~APE~l~~~~~s~ 599 (722)
+..... .....+||+.|+|||++.+..++.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~ 227 (381)
T cd05626 148 CTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQ 227 (381)
T ss_pred CcccccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCC
Confidence 642210 011347899999999999999999
Q ss_pred hhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccch
Q 004954 600 KIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESS 679 (722)
Q Consensus 600 ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~ 679 (722)
++|||||||++|+|++|..||...+..+....+..... ...+|..
T Consensus 228 ~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~~---------------------------------~~~~~~~-- 272 (381)
T cd05626 228 LCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWEN---------------------------------TLHIPPQ-- 272 (381)
T ss_pred ccceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHcccc---------------------------------ccCCCCC--
Confidence 99999999999999999999987766555444431100 0011111
Q ss_pred hhhhcccCcHHHHHHHHHhccc--CCCCCcCHHHHHhCCCCCC
Q 004954 680 LEHHLQFSDAFFIDFVRTLLEI--NPQRRPTAREALDHPWLQH 720 (722)
Q Consensus 680 l~~~~~~~~~~l~dLL~~mL~~--dP~kRpTa~ElL~HPwf~~ 720 (722)
...++++++||.+||.. +|..|+++.++++||||+.
T Consensus 273 -----~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~f~~ 310 (381)
T cd05626 273 -----VKLSPEAVDLITKLCCSAEERLGRNGADDIKAHPFFSE 310 (381)
T ss_pred -----CCCCHHHHHHHHHHccCcccccCCCCHHHHhcCcccCC
Confidence 11346788999996654 5556999999999999975
No 68
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=5.6e-39 Score=354.24 Aligned_cols=251 Identities=25% Similarity=0.360 Sum_probs=202.0
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCe
Q 004954 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 490 (722)
Q Consensus 415 rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~----~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~ 490 (722)
+|+++++||+|+||+||+|++..+++.+|+|++.... .....+.+|+.+++.++ |+||+++++.|...++
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~------h~~iv~~~~~~~~~~~ 75 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEAD------NEWVVRLYYSFQDKDN 75 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCC------CCcCCeEEEEEEeCCE
Confidence 6999999999999999999999999999999987542 23445667888887764 6899999999999999
Q ss_pred EEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCC
Q 004954 491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS 569 (722)
Q Consensus 491 l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGl 569 (722)
+++||||+.+ +|.+++.... .+++..++.++.||+.||+|||++||+||||||+|||++. ++.+||+|||+
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~~------~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~--~g~~kL~DFGl 147 (382)
T cd05625 76 LYFVMDYIPGGDMMSLLIRMG------IFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDR--DGHIKLTDFGL 147 (382)
T ss_pred EEEEEeCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECC--CCCEEEeECCC
Confidence 9999999975 5666664322 2888999999999999999999999999999999999986 78899999998
Q ss_pred cccccC--------------------------------------------------CccccccCCcccCchhhcCCCCCc
Q 004954 570 SCFQTD--------------------------------------------------NLCLYVQSRSYRAPEVIIGLPYDQ 599 (722)
Q Consensus 570 s~~~~~--------------------------------------------------~~~~~~gt~~y~APE~l~~~~~s~ 599 (722)
+..... .....+||+.|+|||++.+..++.
T Consensus 148 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~ 227 (382)
T cd05625 148 CTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQ 227 (382)
T ss_pred CccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCC
Confidence 642110 011246899999999999999999
Q ss_pred hhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccch
Q 004954 600 KIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESS 679 (722)
Q Consensus 600 ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~ 679 (722)
++|||||||++|+|++|++||.+.+..+....+..... ...+|..
T Consensus 228 ~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~---------------------------------~~~~p~~-- 272 (382)
T cd05625 228 LCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQT---------------------------------SLHIPPQ-- 272 (382)
T ss_pred eeeEEechHHHHHHHhCCCCCCCCCHHHHHHHHHccCC---------------------------------CcCCCCc--
Confidence 99999999999999999999988766555544431100 0111111
Q ss_pred hhhhcccCcHHHHHHHHHhcccCCCCCcC---HHHHHhCCCCCC
Q 004954 680 LEHHLQFSDAFFIDFVRTLLEINPQRRPT---AREALDHPWLQH 720 (722)
Q Consensus 680 l~~~~~~~~~~l~dLL~~mL~~dP~kRpT---a~ElL~HPwf~~ 720 (722)
...++++.+||.+|+ .+|.+|++ +.++++||||+.
T Consensus 273 -----~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~ 310 (382)
T cd05625 273 -----AKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAHPFFKT 310 (382)
T ss_pred -----ccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcCCCcCC
Confidence 112466889999986 59999997 999999999975
No 69
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=1.4e-38 Score=340.36 Aligned_cols=286 Identities=26% Similarity=0.413 Sum_probs=208.1
Q ss_pred EEEeccCCCCceEEEEECC--CCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe--cCeEEEE
Q 004954 419 TEYLGSAAFSKVFQAQDLH--TGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH--LEHLFIV 494 (722)
Q Consensus 419 ~~~LG~G~fG~Vy~a~d~~--tg~~vAvKil~~~~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~--~~~l~iV 494 (722)
..+||+|+||+||+|++.. ++..+|+|.+..... .....+|+.+++.++ ||||+++++++.. ...+++|
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~-~~~~~~E~~~l~~l~------h~niv~~~~~~~~~~~~~~~lv 78 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI-SMSACREIALLRELK------HPNVIALQKVFLSHSDRKVWLL 78 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCC-cHHHHHHHHHHHhCC------CCCeeeEEEEEeccCCCeEEEE
Confidence 3579999999999999653 668899999875432 245678888888875 6899999999864 4678999
Q ss_pred EEccccchHHHHhhhhcc---CCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEccc--CCCeEEEEecCC
Q 004954 495 CELLRANLYEFQKFNQES---GGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSY--QRCEIKIIDLGS 569 (722)
Q Consensus 495 mEy~~gsLl~~l~~~~~~---~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~--~~~~vkL~DFGl 569 (722)
|||+.+++.+++...... .....+++..++.++.||+.||.|||+.||+||||||+|||+... .++.+||+|||+
T Consensus 79 ~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~ 158 (317)
T cd07867 79 FDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGF 158 (317)
T ss_pred EeeeCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccc
Confidence 999999988887643321 122348889999999999999999999999999999999999532 357899999999
Q ss_pred cccccCC------ccccccCCcccCchhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCChH---------HHHHHHHH
Q 004954 570 SCFQTDN------LCLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAV---------VMILARII 633 (722)
Q Consensus 570 s~~~~~~------~~~~~gt~~y~APE~l~~~-~~s~ksDIWSLGviL~elltG~~PF~~~~~---------~e~l~~i~ 633 (722)
+...... .....+|+.|+|||++.+. .++.++|||||||++|+|+||++||..... ...+.++.
T Consensus 159 a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~ 238 (317)
T cd07867 159 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIF 238 (317)
T ss_pred eeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHH
Confidence 9765432 1234678999999999774 578999999999999999999999965332 34556677
Q ss_pred hhcCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCc-cchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHH
Q 004954 634 GMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPE-ESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREA 712 (722)
Q Consensus 634 ~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~-~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~El 712 (722)
..+|.+..+.+........+......... .....+. ...........+..+.+||.+||+.||.+|||+.|+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~ 311 (317)
T cd07867 239 SVMGFPADKDWEDIRKMPEYPTLQKDFRR-------TTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQA 311 (317)
T ss_pred HhcCCCChhhhhhhhhcccchhhhhhhcc-------cccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHH
Confidence 77776666655443322221110000000 0000000 000111111234568899999999999999999999
Q ss_pred HhCCCC
Q 004954 713 LDHPWL 718 (722)
Q Consensus 713 L~HPwf 718 (722)
|+||||
T Consensus 312 l~hp~f 317 (317)
T cd07867 312 LQDPYF 317 (317)
T ss_pred hcCCCC
Confidence 999998
No 70
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=3.7e-39 Score=355.03 Aligned_cols=252 Identities=27% Similarity=0.403 Sum_probs=201.5
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~----~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (722)
++|+++++||+|+||+||++++..+++.||||++.... .....+.+|+++++.+ .||||++++++|....
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l------~hp~iv~~~~~~~~~~ 74 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAES------DSPWVVSLYYSFQDAQ 74 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhC------CCCCcceEEEEEEcCC
Confidence 47999999999999999999999999999999987532 2334566777777765 4789999999999999
Q ss_pred eEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecC
Q 004954 490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (722)
Q Consensus 490 ~l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFG 568 (722)
++++||||+.+ +|.+++.... .+++..++.++.||+.||+|||+.||+||||||+|||++. ++.+||+|||
T Consensus 75 ~~~lv~E~~~gg~L~~~l~~~~------~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~--~~~~kl~DfG 146 (377)
T cd05629 75 YLYLIMEFLPGGDLMTMLIKYD------TFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDR--GGHIKLSDFG 146 (377)
T ss_pred eeEEEEeCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECC--CCCEEEeecc
Confidence 99999999974 6766665322 2889999999999999999999999999999999999985 7889999999
Q ss_pred CcccccCC--------------------------------------------------ccccccCCcccCchhhcCCCCC
Q 004954 569 SSCFQTDN--------------------------------------------------LCLYVQSRSYRAPEVIIGLPYD 598 (722)
Q Consensus 569 ls~~~~~~--------------------------------------------------~~~~~gt~~y~APE~l~~~~~s 598 (722)
++...... ....+||+.|+|||++.+..++
T Consensus 147 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~ 226 (377)
T cd05629 147 LSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYG 226 (377)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCC
Confidence 88532110 0024689999999999999999
Q ss_pred chhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccc
Q 004954 599 QKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEES 678 (722)
Q Consensus 599 ~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~ 678 (722)
.++|||||||++|+|++|.+||.+.+..+.+..+...... ..+|..
T Consensus 227 ~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~---------------------------------~~~p~~- 272 (377)
T cd05629 227 QECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRET---------------------------------LYFPDD- 272 (377)
T ss_pred CceeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHccCCc---------------------------------cCCCCC-
Confidence 9999999999999999999999887766665554321000 001111
Q ss_pred hhhhhcccCcHHHHHHHHHhcccCCCCC---cCHHHHHhCCCCCC
Q 004954 679 SLEHHLQFSDAFFIDFVRTLLEINPQRR---PTAREALDHPWLQH 720 (722)
Q Consensus 679 ~l~~~~~~~~~~l~dLL~~mL~~dP~kR---pTa~ElL~HPwf~~ 720 (722)
...+..+.+||.+||+ +|.+| +|+.|+++||||+.
T Consensus 273 ------~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp~~~~ 310 (377)
T cd05629 273 ------IHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHPFFRG 310 (377)
T ss_pred ------CCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCCCcCC
Confidence 0124568899999998 77765 59999999999974
No 71
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=6e-39 Score=347.08 Aligned_cols=244 Identities=26% Similarity=0.392 Sum_probs=198.1
Q ss_pred EEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEE
Q 004954 420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVC 495 (722)
Q Consensus 420 ~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~----~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~iVm 495 (722)
+.||+|+||.||++++..+|+.||+|++.... .......+|+++++.++ ||||+++++++...+.+++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~------hp~iv~~~~~~~~~~~~~lv~ 74 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTR------HPFLTSLKYSFQTKDRLCFVM 74 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC------CCCCcceEEEEEcCCEEEEEE
Confidence 36999999999999999999999999997542 23345566777776664 789999999999999999999
Q ss_pred Ecccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCccccc
Q 004954 496 ELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT 574 (722)
Q Consensus 496 Ey~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~ 574 (722)
||+.+ +|...+... ..+++..++.++.||+.||+|||++||+||||||+|||++. ++.+||+|||++....
T Consensus 75 Ey~~~g~L~~~l~~~------~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~--~~~~kL~DfG~~~~~~ 146 (328)
T cd05593 75 EYVNGGELFFHLSRE------RVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDK--DGHIKITDFGLCKEGI 146 (328)
T ss_pred eCCCCCCHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECC--CCcEEEecCcCCccCC
Confidence 99986 555544322 13889999999999999999999999999999999999986 7889999999986532
Q ss_pred C---CccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhh
Q 004954 575 D---NLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIY 651 (722)
Q Consensus 575 ~---~~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~~~~ 651 (722)
. .....+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+....+...
T Consensus 147 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~---------------- 210 (328)
T cd05593 147 TDAATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME---------------- 210 (328)
T ss_pred CcccccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccC----------------
Confidence 2 223457899999999999999999999999999999999999999877655544433210
Q ss_pred hhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCc-----CHHHHHhCCCCCCC
Q 004954 652 KYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRP-----TAREALDHPWLQHP 721 (722)
Q Consensus 652 ~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRp-----Ta~ElL~HPwf~~~ 721 (722)
...+| ...+..+.+||++||+.||++|+ ++.++++||||...
T Consensus 211 -------------------~~~~p---------~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~ 257 (328)
T cd05593 211 -------------------DIKFP---------RTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTGV 257 (328)
T ss_pred -------------------CccCC---------CCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 00111 12346688999999999999997 89999999999753
No 72
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=8.2e-39 Score=344.68 Aligned_cols=244 Identities=25% Similarity=0.431 Sum_probs=199.7
Q ss_pred EEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEE
Q 004954 420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVC 495 (722)
Q Consensus 420 ~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~----~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~iVm 495 (722)
+.||+|+||+||+|+++.+++.||||+++... ........|..++..+. .||||+++++++...+.+++||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-----~h~~iv~~~~~~~~~~~~~iv~ 75 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLAR-----NHPFLTQLYCCFQTPDRLFFVM 75 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcc-----CCCchhceeeEEEcCCEEEEEE
Confidence 36999999999999999999999999987542 22344556777666553 4789999999999999999999
Q ss_pred Ecccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCccccc
Q 004954 496 ELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT 574 (722)
Q Consensus 496 Ey~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~ 574 (722)
||+.+ +|...+.... .+++..++.++.||+.||+|||+.||+||||||+|||++. ++.+||+|||++....
T Consensus 76 Ey~~~g~L~~~i~~~~------~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~--~~~~kL~DfG~~~~~~ 147 (320)
T cd05590 76 EFVNGGDLMFHIQKSR------RFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDH--EGHCKLADFGMCKEGI 147 (320)
T ss_pred cCCCCchHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECC--CCcEEEeeCCCCeecC
Confidence 99985 5655554322 2889999999999999999999999999999999999986 7889999999986532
Q ss_pred ---CCccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhh
Q 004954 575 ---DNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIY 651 (722)
Q Consensus 575 ---~~~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~~~~ 651 (722)
.......||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+++..+.....
T Consensus 148 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~-------------- 213 (320)
T cd05590 148 FNGKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEV-------------- 213 (320)
T ss_pred cCCCcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCC--------------
Confidence 223345789999999999999999999999999999999999999988877666655531100
Q ss_pred hhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCH------HHHHhCCCCCC
Q 004954 652 KYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTA------REALDHPWLQH 720 (722)
Q Consensus 652 ~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa------~ElL~HPwf~~ 720 (722)
.+|. ..+..+.+||++||+.||.+||++ +++++||||+.
T Consensus 214 ---------------------~~~~---------~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~ 258 (320)
T cd05590 214 ---------------------VYPT---------WLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKE 258 (320)
T ss_pred ---------------------CCCC---------CCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCC
Confidence 0111 124568899999999999999998 99999999975
No 73
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=1.2e-38 Score=343.40 Aligned_cols=249 Identities=24% Similarity=0.355 Sum_probs=203.5
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchh----hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCe
Q 004954 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD----FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 490 (722)
Q Consensus 415 rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~----~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~ 490 (722)
+|++.+.||+|+||+||+|++..+++.+|||++++... .......|..++..+. .|++|+++++++...+.
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-----~~~~i~~~~~~~~~~~~ 75 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSG-----KPPFLTQLHSCFQTMDR 75 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcc-----CCCeEeeEEEEEecCCE
Confidence 48899999999999999999999999999999976431 2233455666665553 36899999999999999
Q ss_pred EEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCC
Q 004954 491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS 569 (722)
Q Consensus 491 l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGl 569 (722)
+++||||+.+ +|...+.... .+++..+..++.||+.||+|||+.||+||||||+|||++. ++.+||+|||+
T Consensus 76 ~~lv~E~~~~g~L~~~~~~~~------~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~--~~~~kL~DfG~ 147 (323)
T cd05616 76 LYFVMEYVNGGDLMYQIQQVG------RFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDS--EGHIKIADFGM 147 (323)
T ss_pred EEEEEcCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECC--CCcEEEccCCC
Confidence 9999999975 6665554322 2889999999999999999999999999999999999996 78899999999
Q ss_pred ccccc---CCccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhh
Q 004954 570 SCFQT---DNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQ 646 (722)
Q Consensus 570 s~~~~---~~~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~ 646 (722)
+.... .......||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+++..+.....
T Consensus 148 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~--------- 218 (323)
T cd05616 148 CKENMWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNV--------- 218 (323)
T ss_pred ceecCCCCCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC---------
Confidence 86532 223345789999999999999999999999999999999999999998877766666542111
Q ss_pred hhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcC-----HHHHHhCCCCCC
Q 004954 647 GQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPT-----AREALDHPWLQH 720 (722)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpT-----a~ElL~HPwf~~ 720 (722)
.+|. ..+..+.+||.+||+.||.+|++ ..++++||||+.
T Consensus 219 --------------------------~~p~---------~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~ 262 (323)
T cd05616 219 --------------------------AYPK---------SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRY 262 (323)
T ss_pred --------------------------CCCC---------cCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCC
Confidence 1111 12456889999999999999997 589999999974
No 74
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=1.1e-38 Score=343.42 Aligned_cols=244 Identities=25% Similarity=0.386 Sum_probs=200.3
Q ss_pred EEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEE
Q 004954 420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVC 495 (722)
Q Consensus 420 ~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~----~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~iVm 495 (722)
++||+|+||.||+|++..+++.||||+++... ........|.+++..+. .||||++++++|...+.+++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~-----~hp~i~~~~~~~~~~~~~~lv~ 75 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAA-----KHPFLTALHCCFQTKDRLFFVM 75 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhcc-----CCCCccceeeEEEcCCeEEEEE
Confidence 36999999999999999999999999997642 22344566777776653 4789999999999999999999
Q ss_pred Ecccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCccccc
Q 004954 496 ELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT 574 (722)
Q Consensus 496 Ey~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~ 574 (722)
||+++ +|...+.... .+++..+..++.||+.||.|||+.||+||||||+|||++. ++.+||+|||++....
T Consensus 76 E~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~--~~~~kL~Dfg~~~~~~ 147 (321)
T cd05591 76 EYVNGGDLMFQIQRSR------KFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDA--EGHCKLADFGMCKEGI 147 (321)
T ss_pred eCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECC--CCCEEEeecccceecc
Confidence 99985 5655554322 2888999999999999999999999999999999999986 7889999999986532
Q ss_pred C---CccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhh
Q 004954 575 D---NLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIY 651 (722)
Q Consensus 575 ~---~~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~~~~ 651 (722)
. ......||+.|+|||++.+..++.++|||||||++|+|++|+.||...+..+.+..+....
T Consensus 148 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~--------------- 212 (321)
T cd05591 148 LNGVTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDD--------------- 212 (321)
T ss_pred cCCccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCC---------------
Confidence 2 2334568999999999999999999999999999999999999999887776665553210
Q ss_pred hhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCc-------CHHHHHhCCCCCC
Q 004954 652 KYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRP-------TAREALDHPWLQH 720 (722)
Q Consensus 652 ~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRp-------Ta~ElL~HPwf~~ 720 (722)
...|. ..+..+.+||++||+.||++|+ ++.++++||||+.
T Consensus 213 --------------------~~~p~---------~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~ 259 (321)
T cd05591 213 --------------------VLYPV---------WLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKE 259 (321)
T ss_pred --------------------CCCCC---------CCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCC
Confidence 01111 1245688999999999999999 9999999999975
No 75
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=1.1e-38 Score=344.22 Aligned_cols=243 Identities=25% Similarity=0.390 Sum_probs=198.2
Q ss_pred EEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEE
Q 004954 420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVC 495 (722)
Q Consensus 420 ~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~----~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~iVm 495 (722)
+.||+|+||.||++++..+|+.||+|+++... .......+|+++++.++ ||||+++++.|...+.+++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~------hp~i~~~~~~~~~~~~~~lv~ 74 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR------HPFLTALKYAFQTHDRLCFVM 74 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCC------CCCCcceeeEEecCCEEEEEE
Confidence 36999999999999999999999999997542 23344556777777664 789999999999999999999
Q ss_pred Ecccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCccccc
Q 004954 496 ELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT 574 (722)
Q Consensus 496 Ey~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~ 574 (722)
||+.+ +|...+.... .+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||++....
T Consensus 75 E~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~--~~~~kL~Dfg~~~~~~ 146 (323)
T cd05595 75 EYANGGELFFHLSRER------VFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDK--DGHIKITDFGLCKEGI 146 (323)
T ss_pred eCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcC--CCCEEecccHHhcccc
Confidence 99986 5544443221 3889999999999999999999999999999999999985 7889999999876532
Q ss_pred C---CccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhh
Q 004954 575 D---NLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIY 651 (722)
Q Consensus 575 ~---~~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~~~~ 651 (722)
. ......||+.|+|||++.+..++.++|||||||++|+|++|+.||...+.......+....
T Consensus 147 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~--------------- 211 (323)
T cd05595 147 SDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEE--------------- 211 (323)
T ss_pred CCCCccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC---------------
Confidence 2 1233578999999999999999999999999999999999999998776655554442100
Q ss_pred hhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCc-----CHHHHHhCCCCCC
Q 004954 652 KYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRP-----TAREALDHPWLQH 720 (722)
Q Consensus 652 ~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRp-----Ta~ElL~HPwf~~ 720 (722)
..+| ...++.+.+||++||+.||.+|+ ++.++++||||.+
T Consensus 212 --------------------~~~p---------~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~ 256 (323)
T cd05595 212 --------------------IRFP---------RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLS 256 (323)
T ss_pred --------------------CCCC---------CCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCC
Confidence 0111 12346688999999999999998 9999999999975
No 76
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=5.6e-39 Score=353.31 Aligned_cols=252 Identities=23% Similarity=0.340 Sum_probs=202.5
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~----~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (722)
.+|++++.||+|+||+||++++..+++.||||++.... .....+.+|+.+++.+. |+||+++++.|...+
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~------h~~iv~~~~~~~~~~ 74 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEAD------NEWVVKLYYSFQDKD 74 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCC------CCCcceEEEEEEcCC
Confidence 36999999999999999999999999999999986532 22345667888888774 689999999999999
Q ss_pred eEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecC
Q 004954 490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (722)
Q Consensus 490 ~l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFG 568 (722)
.+++||||+.+ +|.+++.... .+++..++.++.||+.||+|||++||+||||||+|||++. ++.+||+|||
T Consensus 75 ~~~lv~E~~~~g~L~~~i~~~~------~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~--~~~ikL~DFG 146 (376)
T cd05598 75 NLYFVMDYIPGGDMMSLLIRLG------IFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDR--DGHIKLTDFG 146 (376)
T ss_pred EEEEEEeCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECC--CCCEEEEeCC
Confidence 99999999975 6777765432 2788999999999999999999999999999999999986 7889999999
Q ss_pred CcccccC----------------------------------------------CccccccCCcccCchhhcCCCCCchhh
Q 004954 569 SSCFQTD----------------------------------------------NLCLYVQSRSYRAPEVIIGLPYDQKID 602 (722)
Q Consensus 569 ls~~~~~----------------------------------------------~~~~~~gt~~y~APE~l~~~~~s~ksD 602 (722)
++..... .....+||+.|+|||++.+..++.++|
T Consensus 147 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D 226 (376)
T cd05598 147 LCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCD 226 (376)
T ss_pred CCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCccee
Confidence 8742110 011246899999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhh
Q 004954 603 LWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEH 682 (722)
Q Consensus 603 IWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~ 682 (722)
||||||++|+|++|+.||.+.+..+....+..... ...+|..
T Consensus 227 iwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~---------------------------------~~~~~~~----- 268 (376)
T cd05598 227 WWSVGVILYEMLVGQPPFLADTPAETQLKVINWET---------------------------------TLHIPSQ----- 268 (376)
T ss_pred eeeccceeeehhhCCCCCCCCCHHHHHHHHhccCc---------------------------------cccCCCC-----
Confidence 99999999999999999988776555444321100 0011111
Q ss_pred hcccCcHHHHHHHHHhcccCCCCCc---CHHHHHhCCCCCC
Q 004954 683 HLQFSDAFFIDFVRTLLEINPQRRP---TAREALDHPWLQH 720 (722)
Q Consensus 683 ~~~~~~~~l~dLL~~mL~~dP~kRp---Ta~ElL~HPwf~~ 720 (722)
...+..+.+||.+|+ .+|.+|+ |+.++++||||+.
T Consensus 269 --~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~~~~~ 306 (376)
T cd05598 269 --AKLSREASDLILRLC-CGAEDRLGKNGADEIKAHPFFKG 306 (376)
T ss_pred --CCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCCCcCC
Confidence 112456789999976 5999999 9999999999975
No 77
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=1.4e-38 Score=342.40 Aligned_cols=244 Identities=29% Similarity=0.431 Sum_probs=197.1
Q ss_pred EEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEE
Q 004954 420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVC 495 (722)
Q Consensus 420 ~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~----~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~iVm 495 (722)
++||+|+||.||+|+++.+|+.||+|+++... ........|..++..+ .+||+|+++++++...+++++||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~-----~~~~~i~~~~~~~~~~~~~~lv~ 75 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALA-----WENPFLTHLYCTFQTKEHLFFVM 75 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhc-----cCCCCccCeeEEEEeCCEEEEEE
Confidence 46999999999999999999999999997642 2233455566665544 25789999999999999999999
Q ss_pred Ecccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCcccc-
Q 004954 496 ELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQ- 573 (722)
Q Consensus 496 Ey~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~- 573 (722)
||+.+ +|...+... ..+++..+..++.||+.||+|||++||+||||||+|||++. ++.++|+|||++...
T Consensus 76 E~~~~g~L~~~i~~~------~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~--~~~~kl~Dfg~~~~~~ 147 (316)
T cd05620 76 EFLNGGDLMFHIQDK------GRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDR--DGHIKIADFGMCKENV 147 (316)
T ss_pred CCCCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECC--CCCEEeCccCCCeecc
Confidence 99985 565555432 12889999999999999999999999999999999999986 778999999988642
Q ss_pred --cCCccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhh
Q 004954 574 --TDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIY 651 (722)
Q Consensus 574 --~~~~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~~~~ 651 (722)
........||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+....+....
T Consensus 148 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~~--------------- 212 (316)
T cd05620 148 FGDNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDT--------------- 212 (316)
T ss_pred cCCCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC---------------
Confidence 222344678999999999999999999999999999999999999998877665554442110
Q ss_pred hhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCH-HHHHhCCCCCC
Q 004954 652 KYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTA-REALDHPWLQH 720 (722)
Q Consensus 652 ~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa-~ElL~HPwf~~ 720 (722)
..+| ...+..+.+||++||+.||++||++ +++++||||+.
T Consensus 213 --------------------~~~~---------~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h~~f~~ 253 (316)
T cd05620 213 --------------------PHYP---------RWITKESKDILEKLFERDPTRRLGVVGNIRGHPFFKT 253 (316)
T ss_pred --------------------CCCC---------CCCCHHHHHHHHHHccCCHHHcCCChHHHHcCCCcCC
Confidence 0111 1134568899999999999999997 58889999975
No 78
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=2.9e-38 Score=337.55 Aligned_cols=281 Identities=27% Similarity=0.413 Sum_probs=220.5
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchh---hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec-
Q 004954 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL- 488 (722)
Q Consensus 413 ~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~---~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~- 488 (722)
.++|++.+.||+|+||.||+|.+..+|+.||+|+++.... ......+|+.+++.++ |+||+++++++...
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~------h~~i~~~~~~~~~~~ 79 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLR------HPNIVELKEVVVGKH 79 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCC------CCCCcceEEEEecCC
Confidence 4689999999999999999999999999999999875322 1224557888888775 67999999998765
Q ss_pred -CeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEec
Q 004954 489 -EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDL 567 (722)
Q Consensus 489 -~~l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DF 567 (722)
+..++||||+.++|.+++.... ..+++..++.++.||+.||+|||+.|++||||||+||+++. ++.+||+||
T Consensus 80 ~~~~~lv~e~~~~~l~~~l~~~~-----~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~--~~~~kL~df 152 (309)
T cd07845 80 LDSIFLVMEYCEQDLASLLDNMP-----TPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTD--KGCLKIADF 152 (309)
T ss_pred CCeEEEEEecCCCCHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECC--CCCEEECcc
Confidence 5689999999988888776432 23899999999999999999999999999999999999985 788999999
Q ss_pred CCcccccCC---ccccccCCcccCchhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHH
Q 004954 568 GSSCFQTDN---LCLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEM 643 (722)
Q Consensus 568 Gls~~~~~~---~~~~~gt~~y~APE~l~~-~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~ 643 (722)
|++...... .....+++.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+..+.+..+...++.++...
T Consensus 153 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~ 232 (309)
T cd07845 153 GLARTYGLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESI 232 (309)
T ss_pred ceeeecCCccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhh
Confidence 998765433 222345778999999876 4578999999999999999999999999999999999988888776655
Q ss_pred HhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCCC
Q 004954 644 LMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 720 (722)
Q Consensus 644 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~~ 720 (722)
+.........- ...........+.......++.+.+||.+||++||++|||+.++|+||||+.
T Consensus 233 ~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~ 295 (309)
T cd07845 233 WPGFSDLPLVG--------------KFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKE 295 (309)
T ss_pred chhhhcccccc--------------cccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhcc
Confidence 44322111100 0000000001112222334577899999999999999999999999999975
No 79
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=2.3e-38 Score=327.32 Aligned_cols=252 Identities=35% Similarity=0.560 Sum_probs=203.0
Q ss_pred EEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHh---HHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEE
Q 004954 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQ---SLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF 492 (722)
Q Consensus 416 Y~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~~~~~---~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~ 492 (722)
|++.+.||+|+||+||++++..+++.+|+|++......... ..+|+.+++.++ ||||+++++++......+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~------~~~i~~~~~~~~~~~~~~ 74 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLR------HPNIVQILDVFQDDNYLY 74 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHT------BTTBCHEEEEEEESSEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccc------cccccccccccccccccc
Confidence 89999999999999999999999999999999876533322 345888888885 679999999999999999
Q ss_pred EEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCcc
Q 004954 493 IVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 571 (722)
Q Consensus 493 iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~ 571 (722)
+||||+.+ +|.+++.... .+++..+..++.||+.||.+||+.||+|+||||+||+++. ++.++|+|||.+.
T Consensus 75 ~v~~~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~--~~~~~l~Dfg~~~ 146 (260)
T PF00069_consen 75 IVMEYCPGGSLQDYLQKNK------PLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDE--NGEVKLIDFGSSV 146 (260)
T ss_dssp EEEEEETTEBHHHHHHHHS------SBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEEST--TSEEEESSGTTTE
T ss_pred ccccccccccccccccccc------cccccccccccccccccccccccccccccccccccccccc--ccccccccccccc
Confidence 99999997 7877777222 2899999999999999999999999999999999999995 8889999999986
Q ss_pred cc---cCCccccccCCcccCchhhc-CCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 004954 572 FQ---TDNLCLYVQSRSYRAPEVII-GLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 647 (722)
Q Consensus 572 ~~---~~~~~~~~gt~~y~APE~l~-~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~ 647 (722)
.. ........+++.|+|||++. +..++.++||||||+++|+|++|..||...........+.+.........
T Consensus 147 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~---- 222 (260)
T PF00069_consen 147 KLSENNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSS---- 222 (260)
T ss_dssp ESTSTTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHH----
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhccccccccc----
Confidence 42 22334467899999999998 78899999999999999999999999988733333322221111000000
Q ss_pred hhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCC
Q 004954 648 QEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 718 (722)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf 718 (722)
.. ........+.++|.+||+.||++|||+.++++||||
T Consensus 223 --------------------------~~-------~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~~~ 260 (260)
T PF00069_consen 223 --------------------------SQ-------QSREKSEELRDLIKKMLSKDPEQRPSAEELLKHPWF 260 (260)
T ss_dssp --------------------------TT-------SHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred --------------------------cc-------ccchhHHHHHHHHHHHccCChhHCcCHHHHhcCCCC
Confidence 00 000011568999999999999999999999999997
No 80
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=5e-38 Score=330.19 Aligned_cols=278 Identities=31% Similarity=0.506 Sum_probs=222.2
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 004954 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (722)
Q Consensus 415 rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~---~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (722)
+|++.+.||.|++|.||+|.+..+|+.||+|++.... .....+.+|+.+++.++ |+||+++++++......
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~------~~~i~~~~~~~~~~~~~ 74 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQ------HPYVVKLLDVFPHGSGF 74 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCC------CCCCcceeeEEecCCee
Confidence 5899999999999999999999999999999987543 23456777888887775 78999999999999999
Q ss_pred EEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCcc
Q 004954 492 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 571 (722)
Q Consensus 492 ~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~ 571 (722)
++||||+.++|.+++.... ..+++..++.++.||+.||.|||+.|++|+||||+||+++. ++.++|+|||.+.
T Consensus 75 ~~v~e~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~--~~~~~l~dfg~~~ 147 (286)
T cd07832 75 VLVMEYMPSDLSEVLRDEE-----RPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISA--DGVLKIADFGLAR 147 (286)
T ss_pred EEEecccCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcC--CCcEEEeeeeecc
Confidence 9999999778887776433 23899999999999999999999999999999999999996 7889999999887
Q ss_pred cccCC----ccccccCCcccCchhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhh
Q 004954 572 FQTDN----LCLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQ 646 (722)
Q Consensus 572 ~~~~~----~~~~~gt~~y~APE~l~~~-~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~ 646 (722)
..... .....++..|+|||++.+. .++.++|||||||++|+|++|.+||.+......+..+...++.+....+..
T Consensus 148 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (286)
T cd07832 148 LFSEEEPRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPG 227 (286)
T ss_pred cccCCCCCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhh
Confidence 65433 2335678899999998754 468999999999999999999999998888888888888888776665554
Q ss_pred hhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCC
Q 004954 647 GQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQ 719 (722)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~ 719 (722)
...+.++-.. .........+.......+..+.+||++||+.+|++|||++++|+||||.
T Consensus 228 ~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~~ 286 (286)
T cd07832 228 LTSLPDYNKI--------------TFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT 286 (286)
T ss_pred ccCcchhhcc--------------cCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence 3333222110 0000001112222233457899999999999999999999999999984
No 81
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.8e-38 Score=347.50 Aligned_cols=277 Identities=25% Similarity=0.282 Sum_probs=205.0
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEE
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFI 493 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~i 493 (722)
.+|++++.||+|+||.||+|++..+++.||+|+.... ....|+.+++.++ |+||+++++++......++
T Consensus 66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~-----~~~~E~~~l~~l~------h~~iv~~~~~~~~~~~~~l 134 (357)
T PHA03209 66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG-----TTLIEAMLLQNVN------HPSVIRMKDTLVSGAITCM 134 (357)
T ss_pred cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc-----ccHHHHHHHHhCC------CCCCcChhheEEeCCeeEE
Confidence 4799999999999999999999999999999986443 2346888888775 7899999999999999999
Q ss_pred EEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCcccc
Q 004954 494 VCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQ 573 (722)
Q Consensus 494 VmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~ 573 (722)
|||++.++|++++.... ..+++..++.|+.||+.||.|||+.||+||||||+|||++. .+.+||+|||++...
T Consensus 135 v~e~~~~~l~~~l~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~--~~~~kl~DfG~a~~~ 207 (357)
T PHA03209 135 VLPHYSSDLYTYLTKRS-----RPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFIND--VDQVCIGDLGAAQFP 207 (357)
T ss_pred EEEccCCcHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECC--CCCEEEecCcccccc
Confidence 99999999988876432 23889999999999999999999999999999999999986 778999999998754
Q ss_pred cCC--ccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCC-CCCCh---------HHHHHHHHHhhcCCCcH
Q 004954 574 TDN--LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVL-FPNDA---------VVMILARIIGMLGPIDL 641 (722)
Q Consensus 574 ~~~--~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~P-F~~~~---------~~e~l~~i~~~lg~~~~ 641 (722)
... .....||+.|+|||++.+..++.++|||||||++|+|+++..| |.... ....+..++..++..+.
T Consensus 208 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 287 (357)
T PHA03209 208 VVAPAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPE 287 (357)
T ss_pred ccCcccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChh
Confidence 322 2345789999999999999999999999999999999985444 43311 12333444444443332
Q ss_pred HHHh--hhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCC
Q 004954 642 EMLM--QGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQ 719 (722)
Q Consensus 642 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~ 719 (722)
.... .......++... . ....|............+..+.+||.+||+.||.+||||.|||+||||+
T Consensus 288 ~~~~~~~~~~~~~~~~~~-----------~-~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~ 355 (357)
T PHA03209 288 EFPRDPGSRLVRGFIEYA-----------S-LERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFA 355 (357)
T ss_pred hcCCCCccHHHHHHHhhc-----------c-cCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhc
Confidence 2210 000001110000 0 0000000000000112345677899999999999999999999999998
Q ss_pred C
Q 004954 720 H 720 (722)
Q Consensus 720 ~ 720 (722)
+
T Consensus 356 ~ 356 (357)
T PHA03209 356 Q 356 (357)
T ss_pred c
Confidence 6
No 82
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.5e-39 Score=320.20 Aligned_cols=259 Identities=27% Similarity=0.404 Sum_probs=215.8
Q ss_pred ceecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 004954 410 TVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (722)
Q Consensus 410 ~~l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (722)
..-.++|.+.+.||+|-||.||+|+.+.++-.||+|++.+.. ......|-++.+.+.....+.||||+++|++|.+..
T Consensus 18 ~~~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsq--i~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~ 95 (281)
T KOG0580|consen 18 TWTLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQ--ILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSK 95 (281)
T ss_pred ccchhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHH--HHHhcchhhhhheeEeecccCCccHHhhhhheeccc
Confidence 344578999999999999999999999999999999997653 122222333333343344456899999999999999
Q ss_pred eEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecC
Q 004954 490 HLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (722)
Q Consensus 490 ~l~iVmEy~~-gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFG 568 (722)
.+|+++||.. |.++..+..... ..+.+...+.+++|++.||.|+|.+++|||||||+|+|++. .+.+||+|||
T Consensus 96 riyLilEya~~gel~k~L~~~~~----~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~--~~~lkiAdfG 169 (281)
T KOG0580|consen 96 RIYLILEYAPRGELYKDLQEGRM----KRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGS--AGELKIADFG 169 (281)
T ss_pred eeEEEEEecCCchHHHHHHhccc----ccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCC--CCCeeccCCC
Confidence 9999999996 677777763332 33889999999999999999999999999999999999997 8899999999
Q ss_pred Ccccc-cCCccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 004954 569 SSCFQ-TDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 647 (722)
Q Consensus 569 ls~~~-~~~~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~ 647 (722)
-+... .....+.|||..|.|||+..+..++..+|+|++|++.||++.|.+||...+..+.+.+|.+..
T Consensus 170 wsV~~p~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~----------- 238 (281)
T KOG0580|consen 170 WSVHAPSNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVD----------- 238 (281)
T ss_pred ceeecCCCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHcc-----------
Confidence 88766 444667899999999999999999999999999999999999999999988888888886432
Q ss_pred hhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCCC
Q 004954 648 QEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 720 (722)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~~ 720 (722)
..+|. ..+....|||.+||..+|.+|.+..|++.|||+..
T Consensus 239 ------------------------~~~p~---------~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~a 278 (281)
T KOG0580|consen 239 ------------------------LKFPS---------TISGGAADLISRLLVKNPIERLALTEVMDHPWIVA 278 (281)
T ss_pred ------------------------ccCCc---------ccChhHHHHHHHHhccCccccccHHHHhhhHHHHh
Confidence 22231 12355789999999999999999999999999853
No 83
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=6.4e-39 Score=346.25 Aligned_cols=253 Identities=25% Similarity=0.365 Sum_probs=204.0
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchh----hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD----FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~----~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (722)
++|++.+.||+|+||+||++++..+|+.||+|+++.... ....+.+|+.+++.+ .|+||+++++++...+
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~------~~~~i~~~~~~~~~~~ 74 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSIS------NSPWIPQLQYAFQDKD 74 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC------CCCCCcceeeEEecCC
Confidence 479999999999999999999999999999999986432 334455666766655 4789999999999999
Q ss_pred eEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecC
Q 004954 490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (722)
Q Consensus 490 ~l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFG 568 (722)
..++||||+.+ +|.+++..... .+++..++.++.||+.||.|||+.||+||||||+|||++. ++.+||+|||
T Consensus 75 ~~~lv~e~~~~~~L~~~l~~~~~-----~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~--~~~~kL~Dfg 147 (330)
T cd05601 75 NLYLVMEYQPGGDLLSLLNRYED-----QFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDR--TGHIKLADFG 147 (330)
T ss_pred eEEEEECCCCCCCHHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECC--CCCEEeccCC
Confidence 99999999974 67776654321 3899999999999999999999999999999999999985 7889999999
Q ss_pred CcccccCCc----cccccCCcccCchhhc------CCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCC
Q 004954 569 SSCFQTDNL----CLYVQSRSYRAPEVII------GLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGP 638 (722)
Q Consensus 569 ls~~~~~~~----~~~~gt~~y~APE~l~------~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~ 638 (722)
++....... ....+|+.|+|||++. ...++.++|||||||++|+|++|+.||...+....+.++.....
T Consensus 148 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~- 226 (330)
T cd05601 148 SAARLTANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQR- 226 (330)
T ss_pred CCeECCCCCceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCC-
Confidence 987654322 2246899999999987 45678999999999999999999999988766665555432100
Q ss_pred CcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCC
Q 004954 639 IDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 718 (722)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf 718 (722)
....|.. ...+..+.+||++||+ +|.+|||+.++++||||
T Consensus 227 --------------------------------~~~~~~~-------~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~~ 266 (330)
T cd05601 227 --------------------------------FLKFPED-------PKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPFF 266 (330)
T ss_pred --------------------------------ccCCCCC-------CCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCCCc
Confidence 0001111 1234668899999998 99999999999999999
Q ss_pred CC
Q 004954 719 QH 720 (722)
Q Consensus 719 ~~ 720 (722)
+.
T Consensus 267 ~~ 268 (330)
T cd05601 267 SK 268 (330)
T ss_pred CC
Confidence 75
No 84
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=1.4e-38 Score=350.18 Aligned_cols=253 Identities=23% Similarity=0.348 Sum_probs=204.8
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec
Q 004954 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 488 (722)
Q Consensus 413 ~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~----~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~ 488 (722)
.++|++.+.||+|+||+||++++..+++.||+|++.... .....+.+|+.+++.++ ||||+++++++...
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~------h~~iv~~~~~~~~~ 115 (370)
T cd05596 42 AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHAN------SEWIVQLHYAFQDD 115 (370)
T ss_pred HHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCC------CCCcceEEEEEecC
Confidence 468999999999999999999999999999999997532 22234556777777664 78999999999999
Q ss_pred CeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEec
Q 004954 489 EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDL 567 (722)
Q Consensus 489 ~~l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DF 567 (722)
..+++||||+.+ +|.+++... .+++..+..++.||+.||+|||+.||+||||||+|||++. ++.+||+||
T Consensus 116 ~~~~lv~Ey~~gg~L~~~l~~~-------~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~--~~~~kL~Df 186 (370)
T cd05596 116 KYLYMVMEYMPGGDLVNLMSNY-------DIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDK--SGHLKLADF 186 (370)
T ss_pred CEEEEEEcCCCCCcHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcC--CCCEEEEec
Confidence 999999999975 566655421 2788899999999999999999999999999999999986 789999999
Q ss_pred CCcccccCC----ccccccCCcccCchhhcCC----CCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCC
Q 004954 568 GSSCFQTDN----LCLYVQSRSYRAPEVIIGL----PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPI 639 (722)
Q Consensus 568 Gls~~~~~~----~~~~~gt~~y~APE~l~~~----~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~ 639 (722)
|++...... ....+||+.|+|||++.+. .++.++|||||||++|+|++|+.||.+.+....+..+.....
T Consensus 187 G~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~-- 264 (370)
T cd05596 187 GTCMKMDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKN-- 264 (370)
T ss_pred cceeeccCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCC--
Confidence 998765432 2345789999999998754 378899999999999999999999988776666555542110
Q ss_pred cHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCC--CcCHHHHHhCCC
Q 004954 640 DLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQR--RPTAREALDHPW 717 (722)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~k--RpTa~ElL~HPw 717 (722)
...+|.. ...+..+.+||++||+.+|.+ |+|++++++|||
T Consensus 265 -------------------------------~~~~~~~-------~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~ 306 (370)
T cd05596 265 -------------------------------SLTFPDD-------IEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPF 306 (370)
T ss_pred -------------------------------cCCCCCc-------CCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcc
Confidence 0111111 113467899999999999998 999999999999
Q ss_pred CCC
Q 004954 718 LQH 720 (722)
Q Consensus 718 f~~ 720 (722)
|+.
T Consensus 307 ~~~ 309 (370)
T cd05596 307 FKN 309 (370)
T ss_pred cCC
Confidence 975
No 85
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.8e-38 Score=350.27 Aligned_cols=282 Identities=24% Similarity=0.343 Sum_probs=214.5
Q ss_pred ceecCcEEEEEEeccCCCCceEEEEEC--CCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 004954 410 TVIAGRYYVTEYLGSAAFSKVFQAQDL--HTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 487 (722)
Q Consensus 410 ~~l~~rY~i~~~LG~G~fG~Vy~a~d~--~tg~~vAvKil~~~~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~ 487 (722)
.++..+|++++.||+|+||.||++... .+++.||+|.+.... ...+|+++++.++ ||||+++++++..
T Consensus 88 ~~~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~----~~~~E~~il~~l~------h~~iv~~~~~~~~ 157 (392)
T PHA03207 88 SVVRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK----TPGREIDILKTIS------HRAIINLIHAYRW 157 (392)
T ss_pred hhccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccccc----cHHHHHHHHHhcC------CCCccceeeeEee
Confidence 445678999999999999999999753 456889999886543 3457889988875 6899999999999
Q ss_pred cCeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEec
Q 004954 488 LEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDL 567 (722)
Q Consensus 488 ~~~l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DF 567 (722)
....++|||++.+++.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++. ++.++|+||
T Consensus 158 ~~~~~lv~e~~~~~l~~~l~~~------~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~--~~~~~l~Df 229 (392)
T PHA03207 158 KSTVCMVMPKYKCDLFTYVDRS------GPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDE--PENAVLGDF 229 (392)
T ss_pred CCEEEEEehhcCCCHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcC--CCCEEEccC
Confidence 9999999999999888877422 23899999999999999999999999999999999999985 788999999
Q ss_pred CCcccccCCc-----cccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCh---HHHHHHHHHhhcCCC
Q 004954 568 GSSCFQTDNL-----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDA---VVMILARIIGMLGPI 639 (722)
Q Consensus 568 Gls~~~~~~~-----~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~---~~e~l~~i~~~lg~~ 639 (722)
|++....... ....||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.. ....+..+++.++..
T Consensus 230 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~ 309 (392)
T PHA03207 230 GAACKLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVH 309 (392)
T ss_pred ccccccCcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccC
Confidence 9987544321 23578999999999999999999999999999999999999996543 345666677666655
Q ss_pred cHHHHhhhh-hhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCC
Q 004954 640 DLEMLMQGQ-EIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 718 (722)
Q Consensus 640 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf 718 (722)
+.+...... ...+.+.+... .....+.+|.. +. ....+..+.+||++||+.||++|||+.|+|.||||
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~--~~--~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f 378 (392)
T PHA03207 310 PLEFPQNGSTNLCKHFKQYAI-------VLRPPYTIPPV--IR--KYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLF 378 (392)
T ss_pred ccccCCccchhHHHHHHhhcc-------cccCCccccch--hh--ccCcchhHHHHHHHHhccChhhCCCHHHHhhCchh
Confidence 443221100 00111100000 00000111110 00 11234678899999999999999999999999999
Q ss_pred CC
Q 004954 719 QH 720 (722)
Q Consensus 719 ~~ 720 (722)
++
T Consensus 379 ~~ 380 (392)
T PHA03207 379 TK 380 (392)
T ss_pred hc
Confidence 75
No 86
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2.4e-38 Score=343.06 Aligned_cols=291 Identities=24% Similarity=0.312 Sum_probs=209.7
Q ss_pred ecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 004954 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (722)
Q Consensus 412 l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~--~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (722)
..++|++.++||+|+||.||++.+..+++.+|+|++.... .....+.+|+++++.++ |+||++++++|...+
T Consensus 3 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~~~~ 76 (333)
T cd06650 3 KDDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECN------SPYIVGFYGAFYSDG 76 (333)
T ss_pred chhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCC------CCcccceeEEEEECC
Confidence 4578999999999999999999999999999999987542 33456778888888774 689999999999999
Q ss_pred eEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHC-CCccccCCCCceEEcccCCCeEEEEec
Q 004954 490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL-GIIHCDLKPENILIKSYQRCEIKIIDL 567 (722)
Q Consensus 490 ~l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~-gIvHrDLKp~NILl~~~~~~~vkL~DF 567 (722)
+.++||||+.+ +|.+++.... .+++..+..++.|++.||.|||+. +|+|+||||+|||++. ++.+||+||
T Consensus 77 ~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~--~~~~kL~Df 148 (333)
T cd06650 77 EISICMEHMDGGSLDQVLKKAG------RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNS--RGEIKLCDF 148 (333)
T ss_pred EEEEEEecCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcC--CCCEEEeeC
Confidence 99999999975 6777765432 278899999999999999999985 7999999999999985 778999999
Q ss_pred CCcccccCC-ccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhc-CCCcHHHHh
Q 004954 568 GSSCFQTDN-LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGML-GPIDLEMLM 645 (722)
Q Consensus 568 Gls~~~~~~-~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~l-g~~~~~~~~ 645 (722)
|++...... .....+++.|+|||++.+..++.++|||||||++|+|++|+.||......+....+.... +........
T Consensus 149 g~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (333)
T cd06650 149 GVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETS 228 (333)
T ss_pred CcchhhhhhccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccC
Confidence 998755332 234578999999999999889999999999999999999999998765544332221111 100000000
Q ss_pred -----hhhhhhhhhcccccch-hhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCC
Q 004954 646 -----QGQEIYKYFTKEYDLY-YINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQ 719 (722)
Q Consensus 646 -----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~ 719 (722)
.......+.....+.. .............|.. .....+.++.+||.+||+.||++|||+.|+|+||||+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~ 303 (333)
T cd06650 229 PRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKL-----PSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIK 303 (333)
T ss_pred cccCCccchhhhhcccccccccHHHHHHHHhcCCCccC-----CCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHh
Confidence 0000000000000000 0000000000000000 0112356799999999999999999999999999997
Q ss_pred CC
Q 004954 720 HP 721 (722)
Q Consensus 720 ~~ 721 (722)
..
T Consensus 304 ~~ 305 (333)
T cd06650 304 RS 305 (333)
T ss_pred cC
Confidence 64
No 87
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=2.4e-38 Score=340.43 Aligned_cols=244 Identities=27% Similarity=0.427 Sum_probs=196.3
Q ss_pred EEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEE
Q 004954 420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVC 495 (722)
Q Consensus 420 ~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~----~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~iVm 495 (722)
++||+|+||+||+|++..+++.||||+++... ........|..++..+ ..||||+++++++......++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~-----~~hp~i~~~~~~~~~~~~~~lv~ 75 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALA-----WEHPFLTHLFCTFQTKEHLFFVM 75 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhc-----cCCCCccceeeEEEcCCEEEEEE
Confidence 36999999999999999999999999997643 2223344455555433 35899999999999999999999
Q ss_pred Ecccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCccccc
Q 004954 496 ELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT 574 (722)
Q Consensus 496 Ey~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~ 574 (722)
||+.+ +|...+.... .+++..+..++.||+.||.|||+.||+||||||+|||++. ++.+||+|||++....
T Consensus 76 e~~~gg~L~~~~~~~~------~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~--~~~~kL~Dfg~a~~~~ 147 (316)
T cd05592 76 EYLNGGDLMFHIQSSG------RFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDK--DGHIKIADFGMCKENM 147 (316)
T ss_pred cCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECC--CCCEEEccCcCCeECC
Confidence 99975 5655554322 2889999999999999999999999999999999999986 7889999999987532
Q ss_pred C---CccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhh
Q 004954 575 D---NLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIY 651 (722)
Q Consensus 575 ~---~~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~~~~ 651 (722)
. .....+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+++..+.....
T Consensus 148 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~-------------- 213 (316)
T cd05592 148 NGEGKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDRP-------------- 213 (316)
T ss_pred CCCCccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC--------------
Confidence 2 23345789999999999999999999999999999999999999988776666555431110
Q ss_pred hhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCH-HHHHhCCCCCC
Q 004954 652 KYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTA-REALDHPWLQH 720 (722)
Q Consensus 652 ~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa-~ElL~HPwf~~ 720 (722)
.+| ...+..+.+||.+||+.||.+||++ .++++||||+.
T Consensus 214 ---------------------~~~---------~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h~~~~~ 253 (316)
T cd05592 214 ---------------------HFP---------RWISKEAKDCLSKLFERDPTKRLGVDGDIRQHPFFRG 253 (316)
T ss_pred ---------------------CCC---------CCCCHHHHHHHHHHccCCHHHcCCChHHHHcCcccCC
Confidence 011 1124567899999999999999986 58889999975
No 88
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=2.5e-38 Score=340.42 Aligned_cols=244 Identities=26% Similarity=0.423 Sum_probs=199.4
Q ss_pred EEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEE
Q 004954 420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVC 495 (722)
Q Consensus 420 ~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~----~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~iVm 495 (722)
+.||+|+||+||++++..+++.||||++++.. ........|.++++.+. .||||+++++++...+++++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~-----~h~~i~~~~~~~~~~~~~~lv~ 75 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAG-----KHPFLTQLHSCFQTKDRLFFVM 75 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhcc-----CCCCccceeeEEEcCCEEEEEE
Confidence 36999999999999999999999999998642 23345567777777664 4889999999999999999999
Q ss_pred Ecccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCccccc
Q 004954 496 ELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT 574 (722)
Q Consensus 496 Ey~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~ 574 (722)
||+.+ +|...+.... .+++..+..++.||+.||+|||++||+||||||+|||++. ++.+||+|||++....
T Consensus 76 e~~~~~~L~~~~~~~~------~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~--~~~~kl~Dfg~~~~~~ 147 (318)
T cd05570 76 EYVNGGDLMFHIQRSG------RFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDS--EGHIKIADFGMCKEGI 147 (318)
T ss_pred cCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECC--CCcEEecccCCCeecC
Confidence 99986 5555444321 2899999999999999999999999999999999999986 7889999999886422
Q ss_pred ---CCccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhh
Q 004954 575 ---DNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIY 651 (722)
Q Consensus 575 ---~~~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~~~~ 651 (722)
......++++.|+|||++.+..++.++|||||||++|+|++|+.||.+.+.......+...
T Consensus 148 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~---------------- 211 (318)
T cd05570 148 LGGVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILED---------------- 211 (318)
T ss_pred cCCCcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcC----------------
Confidence 2223356899999999999999999999999999999999999999887765555443211
Q ss_pred hhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCH-----HHHHhCCCCCC
Q 004954 652 KYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTA-----REALDHPWLQH 720 (722)
Q Consensus 652 ~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa-----~ElL~HPwf~~ 720 (722)
...+| ...+..+.+||++||+.||.+|||+ .++++||||+.
T Consensus 212 -------------------~~~~~---------~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~ 257 (318)
T cd05570 212 -------------------EVRYP---------RWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFRE 257 (318)
T ss_pred -------------------CCCCC---------CcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCC
Confidence 00111 1124568899999999999999999 99999999975
No 89
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=3e-38 Score=341.33 Aligned_cols=249 Identities=25% Similarity=0.417 Sum_probs=197.5
Q ss_pred cEEEEEEeccCCCCceEEEEEC---CCCcEEEEEEeecch-----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEE
Q 004954 415 RYYVTEYLGSAAFSKVFQAQDL---HTGVDVCLKIIKNDK-----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY 486 (722)
Q Consensus 415 rY~i~~~LG~G~fG~Vy~a~d~---~tg~~vAvKil~~~~-----~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~ 486 (722)
+|++++.||+|+||+||++++. .+++.||+|++.+.. ........|+.+++.++ .|++|+++++++.
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-----~~~~i~~~~~~~~ 75 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVR-----QSPFLVTLHYAFQ 75 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhcc-----CCCCcccEEEEEe
Confidence 4899999999999999999863 578999999987532 22345667888888775 3689999999999
Q ss_pred ecCeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEE
Q 004954 487 HLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKII 565 (722)
Q Consensus 487 ~~~~l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~ 565 (722)
..+.+++||||+.+ +|.+.+.... .+++..++.++.||+.||+|||++||+||||||+|||++. ++.+||+
T Consensus 76 ~~~~~~lv~e~~~~g~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~--~~~~kl~ 147 (332)
T cd05614 76 TEAKLHLILDYVSGGEMFTHLYQRD------NFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDS--EGHVVLT 147 (332)
T ss_pred cCCEEEEEEeCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECC--CCCEEEe
Confidence 99999999999985 6666664322 2889999999999999999999999999999999999986 7889999
Q ss_pred ecCCcccccCC----ccccccCCcccCchhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCChH----HHHHHHHHhhc
Q 004954 566 DLGSSCFQTDN----LCLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAV----VMILARIIGML 636 (722)
Q Consensus 566 DFGls~~~~~~----~~~~~gt~~y~APE~l~~~-~~s~ksDIWSLGviL~elltG~~PF~~~~~----~e~l~~i~~~l 636 (722)
|||++...... .....||+.|+|||++.+. .++.++|||||||++|+|++|..||..... ..+...+..
T Consensus 148 DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~-- 225 (332)
T cd05614 148 DFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILK-- 225 (332)
T ss_pred eCcCCccccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhc--
Confidence 99998754221 2235789999999999875 478899999999999999999999964321 111111110
Q ss_pred CCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCc-----CHHH
Q 004954 637 GPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRP-----TARE 711 (722)
Q Consensus 637 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRp-----Ta~E 711 (722)
....+| ...+..+.+||.+||+.||++|| ++++
T Consensus 226 ---------------------------------~~~~~~---------~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~ 263 (332)
T cd05614 226 ---------------------------------CDPPFP---------SFIGPEAQDLLHKLLRKDPKKRLGAGPQGASE 263 (332)
T ss_pred ---------------------------------CCCCCC---------CCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHH
Confidence 000111 12346688999999999999999 8999
Q ss_pred HHhCCCCCC
Q 004954 712 ALDHPWLQH 720 (722)
Q Consensus 712 lL~HPwf~~ 720 (722)
+++||||+.
T Consensus 264 ~l~h~~~~~ 272 (332)
T cd05614 264 IKEHPFFKG 272 (332)
T ss_pred HHcCCCcCC
Confidence 999999975
No 90
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=1.1e-38 Score=344.02 Aligned_cols=244 Identities=25% Similarity=0.390 Sum_probs=196.4
Q ss_pred EEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEE
Q 004954 420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVC 495 (722)
Q Consensus 420 ~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~----~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~iVm 495 (722)
+.||+|+||+||++++..+|+.||+|+++... .......+|+++++.+ .||||+++++++...+.+++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~------~hp~i~~~~~~~~~~~~~~lv~ 74 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS------RHPFLTALKYSFQTHDRLCFVM 74 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC------CCCCCCceEEEEEcCCEEEEEE
Confidence 36999999999999999999999999997642 2223445566666655 4789999999999999999999
Q ss_pred Ecccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHH-CCCccccCCCCceEEcccCCCeEEEEecCCcccc
Q 004954 496 ELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS-LGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQ 573 (722)
Q Consensus 496 Ey~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs-~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~ 573 (722)
||+.+ +|...+... ..+++..++.++.||+.||+|||+ .||+||||||+|||++. ++.+||+|||++...
T Consensus 75 E~~~~~~L~~~l~~~------~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~--~~~~kL~Dfg~~~~~ 146 (325)
T cd05594 75 EYANGGELFFHLSRE------RVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDK--DGHIKITDFGLCKEG 146 (325)
T ss_pred eCCCCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECC--CCCEEEecCCCCeec
Confidence 99986 454444322 138899999999999999999997 79999999999999985 788999999998643
Q ss_pred cC---CccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhh
Q 004954 574 TD---NLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEI 650 (722)
Q Consensus 574 ~~---~~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~~~ 650 (722)
.. ......||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+.......+...
T Consensus 147 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~--------------- 211 (325)
T cd05594 147 IKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME--------------- 211 (325)
T ss_pred CCCCcccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcC---------------
Confidence 21 223457899999999999999999999999999999999999999877655544443210
Q ss_pred hhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCc-----CHHHHHhCCCCCCC
Q 004954 651 YKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRP-----TAREALDHPWLQHP 721 (722)
Q Consensus 651 ~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRp-----Ta~ElL~HPwf~~~ 721 (722)
...+| ...++.+.+||++||+.||++|+ ++.++|+||||+..
T Consensus 212 --------------------~~~~p---------~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~ 258 (325)
T cd05594 212 --------------------EIRFP---------RTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGI 258 (325)
T ss_pred --------------------CCCCC---------CCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCCC
Confidence 00111 12346688999999999999997 99999999999863
No 91
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=9.8e-38 Score=329.78 Aligned_cols=279 Identities=27% Similarity=0.424 Sum_probs=216.6
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchh--hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCe
Q 004954 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD--FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 490 (722)
Q Consensus 413 ~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~--~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~ 490 (722)
.++|++.+.||+|++|.||++.++.+++.||||.+..... ......+|+.+++.++ |+||+++++++...+.
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~------h~~i~~~~~~~~~~~~ 77 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLK------HANIVTLHDIIHTKKT 77 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCC------CcceeeEEEEEecCCe
Confidence 3689999999999999999999998999999999865322 2234567888888875 6799999999999999
Q ss_pred EEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCc
Q 004954 491 LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (722)
Q Consensus 491 l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 570 (722)
.++||||+.++|.+++..... .+++..++.++.||++||.|||+.||+|+||||+||+++. ++.++|+|||++
T Consensus 78 ~~lv~e~~~~~L~~~~~~~~~-----~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~--~~~~kl~dfg~~ 150 (291)
T cd07844 78 LTLVFEYLDTDLKQYMDDCGG-----GLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISE--RGELKLADFGLA 150 (291)
T ss_pred EEEEEecCCCCHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcC--CCCEEECccccc
Confidence 999999999888877654321 3889999999999999999999999999999999999986 778999999988
Q ss_pred ccccCC---ccccccCCcccCchhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCh-HHHHHHHHHhhcCCCcHHHHh
Q 004954 571 CFQTDN---LCLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDA-VVMILARIIGMLGPIDLEMLM 645 (722)
Q Consensus 571 ~~~~~~---~~~~~gt~~y~APE~l~~-~~~s~ksDIWSLGviL~elltG~~PF~~~~-~~e~l~~i~~~lg~~~~~~~~ 645 (722)
...... .....++..|+|||++.+ ..++.++||||+|+++|+|++|+.||.+.. ..+.+..+...++.+..+.+.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (291)
T cd07844 151 RAKSVPSKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWP 230 (291)
T ss_pred cccCCCCccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhh
Confidence 654322 122346788999999876 458899999999999999999999997655 566777777777776666655
Q ss_pred hhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccC--cHHHHHHHHHhcccCCCCCcCHHHHHhCCCC
Q 004954 646 QGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFS--DAFFIDFVRTLLEINPQRRPTAREALDHPWL 718 (722)
Q Consensus 646 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~--~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf 718 (722)
.......+........ ....+....... ...+.++|.+||+.+|.+|||+.++|+||||
T Consensus 231 ~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f 291 (291)
T cd07844 231 GVSSNPEFKPYSFPFY--------------PPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF 291 (291)
T ss_pred hhhhcccccccccccc--------------CChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 4433222211111000 000011111111 2567899999999999999999999999998
No 92
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=2.4e-38 Score=348.41 Aligned_cols=253 Identities=23% Similarity=0.368 Sum_probs=203.0
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec
Q 004954 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 488 (722)
Q Consensus 413 ~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~----~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~ 488 (722)
.++|++.+.||+|+||.||++++..+++.+|+|++.+.. .....+.+|+.+++.++ ||||+++++++...
T Consensus 42 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~------hp~iv~~~~~~~~~ 115 (370)
T cd05621 42 AEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN------SPWVVQLFCAFQDD 115 (370)
T ss_pred HHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCC------CCCEeeEEEEEEcC
Confidence 478999999999999999999999999999999986532 12234556777776654 78999999999999
Q ss_pred CeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEec
Q 004954 489 EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDL 567 (722)
Q Consensus 489 ~~l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DF 567 (722)
..+++||||+.+ +|.+++... .+++..+..++.||+.||+|||++||+||||||+|||++. ++.+||+||
T Consensus 116 ~~~~lv~Ey~~gg~L~~~l~~~-------~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~--~~~~kL~DF 186 (370)
T cd05621 116 KYLYMVMEYMPGGDLVNLMSNY-------DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDK--HGHLKLADF 186 (370)
T ss_pred CEEEEEEcCCCCCcHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECC--CCCEEEEec
Confidence 999999999975 677766422 2788899999999999999999999999999999999985 788999999
Q ss_pred CCcccccCC----ccccccCCcccCchhhcCCC----CCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCC
Q 004954 568 GSSCFQTDN----LCLYVQSRSYRAPEVIIGLP----YDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPI 639 (722)
Q Consensus 568 Gls~~~~~~----~~~~~gt~~y~APE~l~~~~----~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~ 639 (722)
|++...... ....+||+.|+|||++.+.. ++.++|||||||++|+|++|+.||.+.+....+.+++.....
T Consensus 187 G~a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~- 265 (370)
T cd05621 187 GTCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNS- 265 (370)
T ss_pred ccceecccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcc-
Confidence 998765432 23457899999999997643 788999999999999999999999887766666555421110
Q ss_pred cHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCC--CcCHHHHHhCCC
Q 004954 640 DLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQR--RPTAREALDHPW 717 (722)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~k--RpTa~ElL~HPw 717 (722)
..+|... ..+..+++||.+||+.++.+ |+|+.|+++|||
T Consensus 266 --------------------------------~~~p~~~-------~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~ 306 (370)
T cd05621 266 --------------------------------LNFPEDV-------EISKHAKNLICAFLTDREVRLGRNGVEEIKQHPF 306 (370)
T ss_pred --------------------------------cCCCCcc-------cCCHHHHHHHHHHccCchhccCCCCHHHHhcCcc
Confidence 1111111 12356889999999866544 899999999999
Q ss_pred CCC
Q 004954 718 LQH 720 (722)
Q Consensus 718 f~~ 720 (722)
|+.
T Consensus 307 ~~~ 309 (370)
T cd05621 307 FKN 309 (370)
T ss_pred cCC
Confidence 975
No 93
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=2.2e-38 Score=346.66 Aligned_cols=252 Identities=21% Similarity=0.362 Sum_probs=203.0
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~----~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (722)
++|++++.||+|+||+||++++..+++.||||+++... .....+.+|+.++..++ |++|+++++.+...+
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~------~~~iv~~~~~~~~~~ 74 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEAD------GAWVVKMFYSFQDKR 74 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCC------CCCEeeEEEEEEcCC
Confidence 46899999999999999999999999999999997532 23345566777776664 789999999999999
Q ss_pred eEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecC
Q 004954 490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (722)
Q Consensus 490 ~l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFG 568 (722)
++++||||+.| +|.+++.... .+++..++.++.||+.||.|||+.||+||||||+|||++. ++.++|+|||
T Consensus 75 ~~~lv~E~~~gg~L~~~l~~~~------~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~--~~~vkL~DfG 146 (360)
T cd05627 75 NLYLIMEFLPGGDMMTLLMKKD------TLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDA--KGHVKLSDFG 146 (360)
T ss_pred EEEEEEeCCCCccHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECC--CCCEEEeecc
Confidence 99999999975 6766665332 2889999999999999999999999999999999999985 7899999999
Q ss_pred CcccccCC--------------------------------------ccccccCCcccCchhhcCCCCCchhhHHHHHHHH
Q 004954 569 SSCFQTDN--------------------------------------LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCIL 610 (722)
Q Consensus 569 ls~~~~~~--------------------------------------~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL 610 (722)
++...... ....+||+.|+|||++.+..++.++|||||||++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil 226 (360)
T cd05627 147 LCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIM 226 (360)
T ss_pred CCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceecccccee
Confidence 87543210 1134689999999999999999999999999999
Q ss_pred HHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHH
Q 004954 611 AELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAF 690 (722)
Q Consensus 611 ~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~ 690 (722)
|+|++|+.||.+.+....+.++..... ...+|... ..+..
T Consensus 227 yel~tG~~Pf~~~~~~~~~~~i~~~~~---------------------------------~~~~p~~~-------~~s~~ 266 (360)
T cd05627 227 YEMLIGYPPFCSETPQETYRKVMNWKE---------------------------------TLVFPPEV-------PISEK 266 (360)
T ss_pred eecccCCCCCCCCCHHHHHHHHHcCCC---------------------------------ceecCCCC-------CCCHH
Confidence 999999999988777666655531100 01112111 12456
Q ss_pred HHHHHHHhcccCCCCCc---CHHHHHhCCCCCC
Q 004954 691 FIDFVRTLLEINPQRRP---TAREALDHPWLQH 720 (722)
Q Consensus 691 l~dLL~~mL~~dP~kRp---Ta~ElL~HPwf~~ 720 (722)
+++||.+|+. ||.+|+ ++.++++||||+.
T Consensus 267 ~~~li~~l~~-~p~~R~~~~~~~ei~~hp~f~~ 298 (360)
T cd05627 267 AKDLILRFCT-DSENRIGSNGVEEIKSHPFFEG 298 (360)
T ss_pred HHHHHHHhcc-ChhhcCCCCCHHHHhcCCCCCC
Confidence 8899999874 999998 5899999999975
No 94
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=3.9e-38 Score=339.01 Aligned_cols=244 Identities=28% Similarity=0.441 Sum_probs=197.1
Q ss_pred EEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEE
Q 004954 420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVC 495 (722)
Q Consensus 420 ~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~----~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~iVm 495 (722)
+.||+|+||+||+|++..+++.||||+++... ........|..++..+ ..||||+++++++...+.+++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~-----~~hp~iv~~~~~~~~~~~~~lv~ 75 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLA-----WEHPFLTHLYCTFQTKENLFFVM 75 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhc-----cCCCcCcceEEEEEeCCEEEEEE
Confidence 36999999999999999999999999997642 2233445566655543 35899999999999999999999
Q ss_pred Ecccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCccccc
Q 004954 496 ELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT 574 (722)
Q Consensus 496 Ey~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~ 574 (722)
||+.+ +|...+.... .+++..+..++.||+.||.|||+.||+||||||+|||++. ++.+||+|||++....
T Consensus 76 ey~~~g~L~~~l~~~~------~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~--~~~~kl~Dfg~~~~~~ 147 (316)
T cd05619 76 EYLNGGDLMFHIQSCH------KFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDT--DGHIKIADFGMCKENM 147 (316)
T ss_pred eCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECC--CCCEEEccCCcceECC
Confidence 99975 6666655322 2888999999999999999999999999999999999986 7789999999986432
Q ss_pred ---CCccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhh
Q 004954 575 ---DNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIY 651 (722)
Q Consensus 575 ---~~~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~~~~ 651 (722)
.......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+.+..+....
T Consensus 148 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~--------------- 212 (316)
T cd05619 148 LGDAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDN--------------- 212 (316)
T ss_pred CCCCceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC---------------
Confidence 22334578999999999999999999999999999999999999998876655554432100
Q ss_pred hhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHH-HHHhCCCCCC
Q 004954 652 KYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAR-EALDHPWLQH 720 (722)
Q Consensus 652 ~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~-ElL~HPwf~~ 720 (722)
..+|. ..+..+.+||.+||+.||++||++. ++++||||+.
T Consensus 213 --------------------~~~~~---------~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h~~~~~ 253 (316)
T cd05619 213 --------------------PCYPR---------WLTREAKDILVKLFVREPERRLGVKGDIRQHPFFRE 253 (316)
T ss_pred --------------------CCCCc---------cCCHHHHHHHHHHhccCHhhcCCChHHHHcCcccCC
Confidence 00111 1235688999999999999999996 8999999975
No 95
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=6.8e-38 Score=329.55 Aligned_cols=277 Identities=30% Similarity=0.454 Sum_probs=218.8
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 004954 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (722)
Q Consensus 415 rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~---~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (722)
+|++++.||.|++|.||+|++..+|+.+|||.+.... .....+.+|+++++.++ ||||+++++++...+..
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~------h~~i~~~~~~~~~~~~~ 74 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN------HPNIVKLLDVIHTENKL 74 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcC------CCCCcchhhhcccCCcE
Confidence 4899999999999999999999999999999886532 12245678888888875 68999999999999999
Q ss_pred EEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCcc
Q 004954 492 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 571 (722)
Q Consensus 492 ~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~ 571 (722)
++||||+.+++..++..... ..+++..++.++.|++.||+|||+.+++|+||+|+||+++. ++.++|+|||++.
T Consensus 75 ~~v~e~~~~~l~~~~~~~~~----~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~--~~~~~l~dfg~~~ 148 (284)
T cd07860 75 YLVFEFLHQDLKKFMDASPL----SGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT--EGAIKLADFGLAR 148 (284)
T ss_pred EEEeeccccCHHHHHHhCCC----CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECC--CCCEEEeeccchh
Confidence 99999998888777654322 23889999999999999999999999999999999999996 7889999999886
Q ss_pred cccCCc---cccccCCcccCchhhcCCC-CCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 004954 572 FQTDNL---CLYVQSRSYRAPEVIIGLP-YDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 647 (722)
Q Consensus 572 ~~~~~~---~~~~gt~~y~APE~l~~~~-~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~ 647 (722)
...... ....+++.|+|||++.+.. ++.++|||||||++|+|+||+.||...+....+.++....+.++...+...
T Consensus 149 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (284)
T cd07860 149 AFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 228 (284)
T ss_pred hcccCccccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhh
Confidence 543321 2234678899999987654 688999999999999999999999998888888888888887766655443
Q ss_pred hhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCC
Q 004954 648 QEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 718 (722)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf 718 (722)
.....+..... ... ...+.......++.+.+||.+||+.||++|||+.++|+||||
T Consensus 229 ~~~~~~~~~~~-------------~~~--~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f 284 (284)
T cd07860 229 TSLPDYKPSFP-------------KWA--RQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF 284 (284)
T ss_pred hHHHHHHhhcc-------------ccc--ccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence 33222111000 000 001111122345678999999999999999999999999998
No 96
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=1.8e-37 Score=328.03 Aligned_cols=279 Identities=26% Similarity=0.392 Sum_probs=215.4
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchh--hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD--FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~--~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (722)
++|++.+.||+|+||.||+|.+..+|+.+|+|++..... ......+|+.+++.+. |+||+++++++...+..
T Consensus 5 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~------h~ni~~~~~~~~~~~~~ 78 (291)
T cd07870 5 TSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLK------HANIVLLHDIIHTKETL 78 (291)
T ss_pred ceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcC------CCCEeEEEEEEecCCeE
Confidence 689999999999999999999999999999999865432 2234567888888774 67999999999999999
Q ss_pred EEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCcc
Q 004954 492 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 571 (722)
Q Consensus 492 ~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~ 571 (722)
++||||+.+++++.+.... ..+++..+..++.|++.||.|||+.||+|+||||+||+++. ++.++|+|||++.
T Consensus 79 ~lv~e~~~~~l~~~~~~~~-----~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~--~~~~~l~Dfg~~~ 151 (291)
T cd07870 79 TFVFEYMHTDLAQYMIQHP-----GGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISY--LGELKLADFGLAR 151 (291)
T ss_pred EEEEecccCCHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcC--CCcEEEecccccc
Confidence 9999999988887765332 12778889999999999999999999999999999999985 7889999999886
Q ss_pred cccCC---ccccccCCcccCchhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCC-hHHHHHHHHHhhcCCCcHHHHhh
Q 004954 572 FQTDN---LCLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPND-AVVMILARIIGMLGPIDLEMLMQ 646 (722)
Q Consensus 572 ~~~~~---~~~~~gt~~y~APE~l~~~-~~s~ksDIWSLGviL~elltG~~PF~~~-~~~e~l~~i~~~lg~~~~~~~~~ 646 (722)
..... .....+++.|+|||.+.+. .++.++|||||||++|+|++|..||... ...+.+.++...++.+...++..
T Consensus 152 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (291)
T cd07870 152 AKSIPSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPG 231 (291)
T ss_pred ccCCCCCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhh
Confidence 54322 2234568899999998764 5788999999999999999999999764 34567777777777766666555
Q ss_pred hhhhhhhhcccccchhhhhccccccccCCccc-hhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCC
Q 004954 647 GQEIYKYFTKEYDLYYINEETNQLEYIIPEES-SLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 718 (722)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~-~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf 718 (722)
.....++....... ..+... ...... ..+..+.++|.+||+.||++|||+.|+|.||||
T Consensus 232 ~~~~~~~~~~~~~~------------~~~~~~~~~~~~~-~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~ 291 (291)
T cd07870 232 VSKLPNYKPEWFLP------------CKPQQLRVVWKRL-SRPPKAEDLASQMLMMFPKDRISAQDALLHPYF 291 (291)
T ss_pred hhhcccccchhccc------------cCCcchhhhcccc-CCChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence 44333322110000 000000 000000 124678899999999999999999999999998
No 97
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=1.6e-37 Score=328.43 Aligned_cols=283 Identities=29% Similarity=0.460 Sum_probs=218.8
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchh---hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCe
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 490 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~---~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~ 490 (722)
++|++.+.||+|+||.||+|.+..+++.||+|+++.... ....+.+|+.+++.+.+ |+||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~-----~~~i~~~~~~~~~~~~ 75 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSE-----SIYIVRLLDVEHVEEK 75 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccC-----CCCccceeeeEeecCC
Confidence 479999999999999999999999999999998865422 23456788998888863 5799999999987765
Q ss_pred -----EEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEE
Q 004954 491 -----LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKII 565 (722)
Q Consensus 491 -----l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~ 565 (722)
.++||||+.+++.+++...... ....+++..++.++.||+.||.|||+.||+||||+|+||+++. .++.++|+
T Consensus 76 ~~~~~~~lv~e~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~-~~~~~kl~ 153 (295)
T cd07837 76 NGKPSLYLVFEYLDSDLKKFMDSNGRG-PGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDK-QKGLLKIA 153 (295)
T ss_pred CCCceEEEEeeccCcCHHHHHHHhccc-CCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEec-CCCeEEEe
Confidence 8999999999888887654322 1234899999999999999999999999999999999999985 36789999
Q ss_pred ecCCcccccCCc---cccccCCcccCchhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcH
Q 004954 566 DLGSSCFQTDNL---CLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDL 641 (722)
Q Consensus 566 DFGls~~~~~~~---~~~~gt~~y~APE~l~~-~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~ 641 (722)
|||++....... ....+++.|+|||++.+ ..++.++||||||+++|+|++|..||.+.+....+.++...++.++.
T Consensus 154 dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (295)
T cd07837 154 DLGLGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTE 233 (295)
T ss_pred ecccceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCCh
Confidence 999987543321 22356788999999865 45789999999999999999999999988777777777776666555
Q ss_pred HHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCC
Q 004954 642 EMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQ 719 (722)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~ 719 (722)
..+........+... ....+ ..+.......+..+.+||.+||+.||.+|||+.|+|.||||+
T Consensus 234 ~~~~~~~~~~~~~~~--------------~~~~~--~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~~~ 295 (295)
T cd07837 234 QVWPGVSKLRDWHEF--------------PQWKP--QDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYFD 295 (295)
T ss_pred hhCcchhhccchhhc--------------Ccccc--hhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcCCCcC
Confidence 444332222111100 00000 011111123456789999999999999999999999999995
No 98
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1e-38 Score=336.68 Aligned_cols=256 Identities=27% Similarity=0.367 Sum_probs=213.4
Q ss_pred ecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 004954 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 487 (722)
Q Consensus 412 l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~----~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~ 487 (722)
-...|++++.||+|.-|+||+++...++..+|+|++.+.. ....+...|.+||..+ +||.++.+|..|+.
T Consensus 75 ~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~l------DHPFlPTLYa~fet 148 (459)
T KOG0610|consen 75 GLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLL------DHPFLPTLYASFET 148 (459)
T ss_pred CHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhc------CCCccchhhheeec
Confidence 3467999999999999999999999999999999997643 3345566777888777 58899999999999
Q ss_pred cCeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEec
Q 004954 488 LEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDL 567 (722)
Q Consensus 488 ~~~l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DF 567 (722)
....|+|||||.|+-+..++..+ ....|++..++.++..++.||+|||-.|||+|||||+||||.. +|.|-|+||
T Consensus 149 ~~~~cl~meyCpGGdL~~LrqkQ---p~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvre--dGHIMLsDF 223 (459)
T KOG0610|consen 149 DKYSCLVMEYCPGGDLHSLRQKQ---PGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVRE--DGHIMLSDF 223 (459)
T ss_pred cceeEEEEecCCCccHHHHHhhC---CCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEec--CCcEEeeec
Confidence 99999999999876555555443 3455999999999999999999999999999999999999996 899999999
Q ss_pred CCccccc-----------------------------------CC------------------------ccccccCCcccC
Q 004954 568 GSSCFQT-----------------------------------DN------------------------LCLYVQSRSYRA 588 (722)
Q Consensus 568 Gls~~~~-----------------------------------~~------------------------~~~~~gt~~y~A 588 (722)
.++.... .. ...++||-.|.|
T Consensus 224 DLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlA 303 (459)
T KOG0610|consen 224 DLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLA 303 (459)
T ss_pred cccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCcccccccccccccc
Confidence 9752100 00 011467888999
Q ss_pred chhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhcccccchhhhhccc
Q 004954 589 PEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETN 668 (722)
Q Consensus 589 PE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (722)
||++.|...+.++|+|+|||++||||.|..||.+.+..+.+.+|+..--.
T Consensus 304 PEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~------------------------------ 353 (459)
T KOG0610|consen 304 PEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLK------------------------------ 353 (459)
T ss_pred ceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCc------------------------------
Confidence 99999999999999999999999999999999999999999998733221
Q ss_pred cccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcC----HHHHHhCCCCCC
Q 004954 669 QLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPT----AREALDHPWLQH 720 (722)
Q Consensus 669 ~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpT----a~ElL~HPwf~~ 720 (722)
+|... .....++|||+++|.+||++|.. |.||=+||||+.
T Consensus 354 -----Fp~~~-------~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~g 397 (459)
T KOG0610|consen 354 -----FPEEP-------EVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEG 397 (459)
T ss_pred -----CCCCC-------cchhHHHHHHHHHhccChhhhhccccchHHhhcCccccC
Confidence 22221 12345889999999999999998 999999999975
No 99
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=2.4e-37 Score=325.04 Aligned_cols=279 Identities=27% Similarity=0.442 Sum_probs=213.5
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCe
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 490 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~---~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~ 490 (722)
++|++.+.||+|++|.||++.+..+|+.||+|++.... .....+.+|+.+++.++ |+||+++++++.....
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~------h~~i~~~~~~~~~~~~ 74 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLK------HPNLVNLIEVFRRKRK 74 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCC------CCCEeeeeeEEeeCCE
Confidence 47999999999999999999999999999999886432 12344667888888775 6799999999999999
Q ss_pred EEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCc
Q 004954 491 LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (722)
Q Consensus 491 l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 570 (722)
.++||||++++++..+..... .+++..++.++.||+.||.|||+.|++|+||||+||+++. ++.++|+|||++
T Consensus 75 ~~~v~e~~~~~~l~~~~~~~~-----~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~--~~~~~l~dfg~~ 147 (286)
T cd07847 75 LHLVFEYCDHTVLNELEKNPR-----GVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITK--QGQIKLCDFGFA 147 (286)
T ss_pred EEEEEeccCccHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcC--CCcEEECccccc
Confidence 999999999877766543221 2889999999999999999999999999999999999986 778999999998
Q ss_pred ccccCCc---cccccCCcccCchhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhh
Q 004954 571 CFQTDNL---CLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQ 646 (722)
Q Consensus 571 ~~~~~~~---~~~~gt~~y~APE~l~~-~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~ 646 (722)
....... ....++..|+|||.+.+ ..++.++||||||+++|+|++|++||.+....+.+..+....+.........
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (286)
T cd07847 148 RILTGPGDDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQI 227 (286)
T ss_pred eecCCCcccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhh
Confidence 7654432 23457888999999876 4578899999999999999999999998877777777666555443321111
Q ss_pred hhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCC
Q 004954 647 GQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 718 (722)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf 718 (722)
.. ...+.. .. ... .......+.......+..+.+||.+||+.+|++|||+.|+|.||||
T Consensus 228 ~~-~~~~~~--------~~---~~~-~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f 286 (286)
T cd07847 228 FS-TNQFFK--------GL---SIP-EPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF 286 (286)
T ss_pred cc-cccccc--------cc---cCC-CcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence 00 000000 00 000 0000011112222346778999999999999999999999999998
No 100
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=7.8e-38 Score=331.66 Aligned_cols=279 Identities=32% Similarity=0.460 Sum_probs=219.0
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhh------hHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec
Q 004954 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF------FDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 488 (722)
Q Consensus 415 rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~~------~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~ 488 (722)
+|++.+.||.|++|.||+|.+..+++.||||.++..... ...+..|+.+++.++ |+||+++++++...
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~------h~~i~~~~~~~~~~ 74 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELK------HPNIIGLLDVFGHK 74 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcC------CCCChhhhheeecC
Confidence 588999999999999999999999999999998764321 234456777777664 78999999999999
Q ss_pred CeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecC
Q 004954 489 EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (722)
Q Consensus 489 ~~l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFG 568 (722)
+.+++||||+.++|.+++.... ..+++..++.++.||++||.|||+.||+|+||+|+||+++. ++.++|+|||
T Consensus 75 ~~~~lv~e~~~~~L~~~i~~~~-----~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~--~~~~~l~dfg 147 (298)
T cd07841 75 SNINLVFEFMETDLEKVIKDKS-----IVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIAS--DGVLKLADFG 147 (298)
T ss_pred CEEEEEEcccCCCHHHHHhccC-----CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcC--CCCEEEccce
Confidence 9999999999777877775432 13899999999999999999999999999999999999996 7889999999
Q ss_pred CcccccCC---ccccccCCcccCchhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHH
Q 004954 569 SSCFQTDN---LCLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEML 644 (722)
Q Consensus 569 ls~~~~~~---~~~~~gt~~y~APE~l~~-~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~ 644 (722)
++...... .....+++.|+|||.+.+ ..++.++|||||||++|+|++|.+||.+.+..+.+.++...++.+...++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (298)
T cd07841 148 LARSFGSPNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENW 227 (298)
T ss_pred eeeeccCCCccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhh
Confidence 98765432 222356788999999865 45789999999999999999999999888777777777777776666555
Q ss_pred hhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCCCCC
Q 004954 645 MQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQHPY 722 (722)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~~~~ 722 (722)
........+... ...............+..+.+||.+||++||++|||+.|+|+||||++.+
T Consensus 228 ~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~~~ 289 (298)
T cd07841 228 PGVTSLPDYVEF----------------KPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSNDP 289 (298)
T ss_pred hhcccccccccc----------------cccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCccccCCC
Confidence 443322211110 00011111122233456789999999999999999999999999998753
No 101
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-38 Score=340.96 Aligned_cols=257 Identities=29% Similarity=0.491 Sum_probs=223.9
Q ss_pred eCceecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEE
Q 004954 408 LNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDY 484 (722)
Q Consensus 408 ~~~~l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~---~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~ 484 (722)
.+..|++-|.+.+.||+|.|+.|-+|++..+|+.||||++.+.+ .....+..|++.|+.++ |||||++|.+
T Consensus 12 ~DgkIAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQ------HpNiVRLYEV 85 (864)
T KOG4717|consen 12 YDGKIAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQ------HPNIVRLYEV 85 (864)
T ss_pred cccceeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhc------CcCeeeeeeh
Confidence 34567888999999999999999999999999999999997654 33456778888888886 6899999999
Q ss_pred EEecCeEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEE
Q 004954 485 FYHLEHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIK 563 (722)
Q Consensus 485 f~~~~~l~iVmEy~~-gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vk 563 (722)
......+|+|+|+-. |+|.+++...... +.+..+++++.||+.|+.|+|+..+|||||||+||.+-. .-|-||
T Consensus 86 iDTQTKlyLiLELGD~GDl~DyImKHe~G-----l~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFE-KlGlVK 159 (864)
T KOG4717|consen 86 IDTQTKLYLILELGDGGDLFDYIMKHEEG-----LNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFE-KLGLVK 159 (864)
T ss_pred hcccceEEEEEEecCCchHHHHHHhhhcc-----ccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEee-ecCceE
Confidence 999999999999987 5899999876543 899999999999999999999999999999999998875 578999
Q ss_pred EEecCCccc--ccCCccccccCCcccCchhhcCCCCC-chhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCc
Q 004954 564 IIDLGSSCF--QTDNLCLYVQSRSYRAPEVIIGLPYD-QKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPID 640 (722)
Q Consensus 564 L~DFGls~~--~~~~~~~~~gt~~y~APE~l~~~~~s-~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~ 640 (722)
|+|||++-. .+....+.||+..|.|||+++|..|+ .++||||||||||.|++|++||+..+..+.+..|+.+
T Consensus 160 LTDFGFSNkf~PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDC----- 234 (864)
T KOG4717|consen 160 LTDFGFSNKFQPGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDC----- 234 (864)
T ss_pred eeeccccccCCCcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcc-----
Confidence 999999843 34567789999999999999999988 5899999999999999999999998888888887633
Q ss_pred HHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCCC
Q 004954 641 LEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 720 (722)
Q Consensus 641 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~~ 720 (722)
.|.+|... +.+.++||..||..||.+|.+.+||..|+|+|.
T Consensus 235 ------------------------------KYtvPshv---------S~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~ 275 (864)
T KOG4717|consen 235 ------------------------------KYTVPSHV---------SKECRDLIQSMLVRDPKKRASLEEIVSTSWLQA 275 (864)
T ss_pred ------------------------------cccCchhh---------hHHHHHHHHHHHhcCchhhccHHHHhccccccC
Confidence 34444322 356889999999999999999999999999985
No 102
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4.1e-39 Score=336.56 Aligned_cols=253 Identities=31% Similarity=0.511 Sum_probs=218.9
Q ss_pred eecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEE
Q 004954 411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY 486 (722)
Q Consensus 411 ~l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~----~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~ 486 (722)
-+..||.+.+.||+|.||+|-+|.+...|+.||||.+++++ ...-.+.+|++|+..|+ ||||+++|.+|+
T Consensus 50 nlkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLN------HPhII~IyEVFE 123 (668)
T KOG0611|consen 50 NLKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLN------HPHIIQIYEVFE 123 (668)
T ss_pred chhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcC------CCceeehhhhhc
Confidence 45679999999999999999999999999999999998753 33345678888888886 789999999999
Q ss_pred ecCeEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEE
Q 004954 487 HLEHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKII 565 (722)
Q Consensus 487 ~~~~l~iVmEy~~-gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~ 565 (722)
..+.+.|||||.. |.|++++..++. +++.+++.+++||+.|+.|+|+++++|||||.+|||++. ++.+||+
T Consensus 124 NkdKIvivMEYaS~GeLYDYiSer~~------LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~--N~NiKIA 195 (668)
T KOG0611|consen 124 NKDKIVIVMEYASGGELYDYISERGS------LSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQ--NNNIKIA 195 (668)
T ss_pred CCceEEEEEEecCCccHHHHHHHhcc------ccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecC--CCCeeee
Confidence 9999999999997 679999987654 999999999999999999999999999999999999995 8899999
Q ss_pred ecCCcccccCC--ccccccCCcccCchhhcCCCCC-chhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHH
Q 004954 566 DLGSSCFQTDN--LCLYVQSRSYRAPEVIIGLPYD-QKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLE 642 (722)
Q Consensus 566 DFGls~~~~~~--~~~~~gt~~y~APE~l~~~~~s-~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~ 642 (722)
|||++-.+.+. ..++||+|-|.+||++.|.+|. ..+|.|||||+||.|+.|..||.+.+...+..+|...
T Consensus 196 DFGLSNly~~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~G------- 268 (668)
T KOG0611|consen 196 DFGLSNLYADKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRG------- 268 (668)
T ss_pred ccchhhhhccccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcc-------
Confidence 99999776554 5678999999999999999976 6899999999999999999999998887777766421
Q ss_pred HHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCCCCC
Q 004954 643 MLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQHPY 722 (722)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~~~~ 722 (722)
.|.-|+. +....-||++||..||.+|.|+.++..|=|+.-.|
T Consensus 269 ----------------------------aYrEP~~----------PSdA~gLIRwmLmVNP~RRATieDiAsHWWvNwgy 310 (668)
T KOG0611|consen 269 ----------------------------AYREPET----------PSDASGLIRWMLMVNPERRATIEDIASHWWVNWGY 310 (668)
T ss_pred ----------------------------cccCCCC----------CchHHHHHHHHHhcCcccchhHHHHhhhheeeccc
Confidence 1222221 23356899999999999999999999999987554
No 103
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=1e-37 Score=336.56 Aligned_cols=249 Identities=24% Similarity=0.370 Sum_probs=202.9
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCe
Q 004954 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 490 (722)
Q Consensus 415 rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~----~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~ 490 (722)
+|++.+.||+|+||+||+|+++.+|+.||||+++... ........|..+++.+.+ |++|+++++++...+.
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~-----~~~i~~~~~~~~~~~~ 75 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDK-----PPFLTQLHSCFQTVDR 75 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccC-----CCchhheeeEEecCCE
Confidence 4788999999999999999999999999999997542 223345667777766643 5689999999999999
Q ss_pred EEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCC
Q 004954 491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS 569 (722)
Q Consensus 491 l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGl 569 (722)
+++||||+.+ +|...+.... .+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||+
T Consensus 76 ~~lv~Ey~~~g~L~~~i~~~~------~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~--~~~ikL~Dfg~ 147 (323)
T cd05615 76 LYFVMEYVNGGDLMYHIQQVG------KFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDS--EGHIKIADFGM 147 (323)
T ss_pred EEEEEcCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECC--CCCEEEecccc
Confidence 9999999975 5655554322 2889999999999999999999999999999999999996 78899999999
Q ss_pred cccccC---CccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhh
Q 004954 570 SCFQTD---NLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQ 646 (722)
Q Consensus 570 s~~~~~---~~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~ 646 (722)
+..... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+.......+.....
T Consensus 148 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~--------- 218 (323)
T cd05615 148 CKEHMVDGVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNV--------- 218 (323)
T ss_pred ccccCCCCccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC---------
Confidence 865322 22345689999999999999999999999999999999999999988776666655542110
Q ss_pred hhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcC-----HHHHHhCCCCCC
Q 004954 647 GQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPT-----AREALDHPWLQH 720 (722)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpT-----a~ElL~HPwf~~ 720 (722)
..| ...+..+.+|+.+||+.+|.+|++ ..++++||||+.
T Consensus 219 --------------------------~~p---------~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~ 262 (323)
T cd05615 219 --------------------------SYP---------KSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRR 262 (323)
T ss_pred --------------------------CCC---------ccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCC
Confidence 011 112356789999999999999997 589999999975
No 104
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=2.4e-37 Score=324.36 Aligned_cols=273 Identities=33% Similarity=0.518 Sum_probs=214.1
Q ss_pred EEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchh--hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec--CeE
Q 004954 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD--FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL--EHL 491 (722)
Q Consensus 416 Y~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~--~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~--~~l 491 (722)
|++.+.||+|+||.||++.+..+++.+|+|+++.... ......+|+.+++++. .|+||+++++++... +.+
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~-----~h~~i~~~~~~~~~~~~~~~ 75 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLS-----PHPNILRLIEVLFDRKTGRL 75 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcC-----CCCCccceEEEEecCCCCcE
Confidence 6789999999999999999999999999999875321 1223345666666654 378999999999987 899
Q ss_pred EEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCcc
Q 004954 492 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 571 (722)
Q Consensus 492 ~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~ 571 (722)
++||||+.+++++.+.... ..+++..++.++.||+.||.|||+.|++||||+|+||+++. +.+||+|||++.
T Consensus 76 ~lv~e~~~~~l~~~l~~~~-----~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~---~~~kl~dfg~~~ 147 (282)
T cd07831 76 ALVFELMDMNLYELIKGRK-----RPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD---DILKLADFGSCR 147 (282)
T ss_pred EEEEecCCccHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC---CCeEEEeccccc
Confidence 9999999999888776432 23899999999999999999999999999999999999994 889999999987
Q ss_pred cccCC--ccccccCCcccCchhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhh
Q 004954 572 FQTDN--LCLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQ 648 (722)
Q Consensus 572 ~~~~~--~~~~~gt~~y~APE~l~~-~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~ 648 (722)
..... .....+++.|+|||.+.. ..++.++|||||||++|+|++|..||++.+..+.+..+...++..+..+.....
T Consensus 148 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (282)
T cd07831 148 GIYSKPPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFR 227 (282)
T ss_pred ccccCCCcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhc
Confidence 65332 223457889999998654 457889999999999999999999999988888888888888877765521110
Q ss_pred hhhhhhcccccchhhhhccccccccCCc--cchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCC
Q 004954 649 EIYKYFTKEYDLYYINEETNQLEYIIPE--ESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 718 (722)
Q Consensus 649 ~~~~~~~~~~~~~~~~~~~~~~~~~ip~--~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf 718 (722)
. . .......|. ...+.......+..+.+||.+||+.||++|||+.++|+||||
T Consensus 228 ---~----~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~ 282 (282)
T cd07831 228 ---K----S----------RHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF 282 (282)
T ss_pred ---c----c----------ccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence 0 0 000011111 111122223346789999999999999999999999999998
No 105
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-39 Score=346.22 Aligned_cols=248 Identities=31% Similarity=0.470 Sum_probs=208.2
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~--~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (722)
..|+.++.||+|.||.||+|.+..+++.||+|++..+ ......+..|+.+|..++. +||.++|+.|..+..+
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~------~~it~yygsyl~g~~L 86 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDS------PNITEYYGSYLKGTKL 86 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCc------chHHhhhhheeecccH
Confidence 4588889999999999999999999999999999764 3445677788888888864 6999999999999999
Q ss_pred EEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCc
Q 004954 492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (722)
Q Consensus 492 ~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 570 (722)
+|+||||.| +++++++.... +.+..+..|+++++.||.|||..+.+|||||+.|||+.. .+.+||+|||.+
T Consensus 87 wiiMey~~gGsv~~lL~~~~~------~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~--~g~vkl~DfgVa 158 (467)
T KOG0201|consen 87 WIIMEYCGGGSVLDLLKSGNI------LDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSE--SGDVKLADFGVA 158 (467)
T ss_pred HHHHHHhcCcchhhhhccCCC------CccceeeeehHHHHHHhhhhhhcceecccccccceeEec--cCcEEEEeccee
Confidence 999999985 67777764432 477888899999999999999999999999999999997 689999999998
Q ss_pred ccccCC---ccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 004954 571 CFQTDN---LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 647 (722)
Q Consensus 571 ~~~~~~---~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~ 647 (722)
.+.... ..+++|||.|||||++.+..|+.++||||||++.+||++|.+||....+.-++
T Consensus 159 ~ql~~~~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvl------------------ 220 (467)
T KOG0201|consen 159 GQLTNTVKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVL------------------ 220 (467)
T ss_pred eeeechhhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEE------------------
Confidence 776543 35689999999999999999999999999999999999999999765442111
Q ss_pred hhhhhhhcccccchhhhhccccccccCCccc--hhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCCC
Q 004954 648 QEIYKYFTKEYDLYYINEETNQLEYIIPEES--SLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 720 (722)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~--~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~~ 720 (722)
..||... .+.. ..++.|++||..||+.||+.||+|.+||+|+|++.
T Consensus 221 ------------------------flIpk~~PP~L~~---~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~ 268 (467)
T KOG0201|consen 221 ------------------------FLIPKSAPPRLDG---DFSPPFKEFVEACLDKNPEFRPSAKELLKHKFIKR 268 (467)
T ss_pred ------------------------EeccCCCCCcccc---ccCHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHh
Confidence 1222211 1111 33567999999999999999999999999999975
No 106
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=6.4e-38 Score=339.04 Aligned_cols=253 Identities=22% Similarity=0.341 Sum_probs=194.4
Q ss_pred EEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEE
Q 004954 420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVC 495 (722)
Q Consensus 420 ~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~----~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~iVm 495 (722)
+.||+|+||.||++++..+++.||+|+++... .....+..|..+++.+. .||||++++++|.....+++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~-----~hp~Iv~~~~~~~~~~~~~lv~ 75 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETAS-----NHPFLVGLHSCFQTESRLFFVI 75 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcc-----CCCCCCceEEEEEcCCEEEEEE
Confidence 36999999999999999999999999998632 22345667777777664 4789999999999999999999
Q ss_pred Ecccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCcccc-
Q 004954 496 ELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQ- 573 (722)
Q Consensus 496 Ey~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~- 573 (722)
||+.+ +|...+... ..+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||++...
T Consensus 76 e~~~~g~L~~~~~~~------~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~--~~~~kL~Dfg~~~~~~ 147 (329)
T cd05588 76 EFVSGGDLMFHMQRQ------RKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDA--EGHIKLTDYGMCKEGI 147 (329)
T ss_pred eCCCCCCHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECC--CCCEEECcCccccccc
Confidence 99986 555554422 12899999999999999999999999999999999999986 788999999998642
Q ss_pred --cCCccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhh
Q 004954 574 --TDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIY 651 (722)
Q Consensus 574 --~~~~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~~~~ 651 (722)
.......+||+.|+|||++.+..++.++|||||||++|+|++|+.||......... .....+.. .
T Consensus 148 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~-------~~~~~~~~------~ 214 (329)
T cd05588 148 RPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNP-------DQNTEDYL------F 214 (329)
T ss_pred cCCCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccc-------cccchHHH------H
Confidence 22234467899999999999999999999999999999999999999532110000 00000000 0
Q ss_pred hhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcC------HHHHHhCCCCCC
Q 004954 652 KYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPT------AREALDHPWLQH 720 (722)
Q Consensus 652 ~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpT------a~ElL~HPwf~~ 720 (722)
+.+ ......+|. ..+..+.+||++||+.||.+|+| +.++++||||..
T Consensus 215 ~~~-------------~~~~~~~p~---------~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~ 267 (329)
T cd05588 215 QVI-------------LEKQIRIPR---------SLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRN 267 (329)
T ss_pred HHH-------------HcCCCCCCC---------CCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCC
Confidence 000 000011121 23456889999999999999987 799999999974
No 107
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1e-38 Score=303.10 Aligned_cols=278 Identities=31% Similarity=0.447 Sum_probs=235.5
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchh---hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 004954 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (722)
Q Consensus 415 rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~---~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (722)
+|.-.++||+|.||+|+++++..+++.||+|.++.+.+ .....++|+-++++++| .|||+++++.-.+..+
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkh------knivrl~dvlhsdkkl 76 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH------KNIVRLHDVLHSDKKL 76 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhh------cceeehhhhhccCcee
Confidence 46667899999999999999999999999999986532 34567899999999974 5899999999999999
Q ss_pred EEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCcc
Q 004954 492 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 571 (722)
Q Consensus 492 ~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~ 571 (722)
-+|+|||...|..+...... .+..+.++.++.|+++||.|+|+.++.|||+||.|.||+. +|++||+|||+++
T Consensus 77 tlvfe~cdqdlkkyfdslng-----~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~--ngelkladfglar 149 (292)
T KOG0662|consen 77 TLVFEFCDQDLKKYFDSLNG-----DLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINR--NGELKLADFGLAR 149 (292)
T ss_pred EEeHHHhhHHHHHHHHhcCC-----cCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEecc--CCcEEecccchhh
Confidence 99999999888888775443 2888999999999999999999999999999999999996 8999999999998
Q ss_pred cccCCcc---ccccCCcccCchhhcCCC-CCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHHHHhh
Q 004954 572 FQTDNLC---LYVQSRSYRAPEVIIGLP-YDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLMQ 646 (722)
Q Consensus 572 ~~~~~~~---~~~gt~~y~APE~l~~~~-~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~ 646 (722)
-.+-+.. ..+-|.+|++|.++.+.+ |+...|+||.|||+.|+.. |++.|++.+..+++.+|...+|.+..+.|+.
T Consensus 150 afgipvrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps 229 (292)
T KOG0662|consen 150 AFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPS 229 (292)
T ss_pred hcCCceEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCc
Confidence 7766542 245689999999999865 8999999999999999987 9999999999999999999999999888877
Q ss_pred hhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCCC
Q 004954 647 GQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 720 (722)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~~ 720 (722)
...+.+|.. ....|...++++..+.....-++|++++|.-+|.+|++|+++|+||+|..
T Consensus 230 ~t~lpdyk~---------------yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqhpyf~d 288 (292)
T KOG0662|consen 230 MTKLPDYKP---------------YPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSD 288 (292)
T ss_pred cccCCCCcc---------------cCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCccccc
Confidence 655544321 12234444444444444455679999999999999999999999999975
No 108
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=1.4e-37 Score=328.83 Aligned_cols=254 Identities=24% Similarity=0.280 Sum_probs=202.2
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchh----hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCe
Q 004954 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD----FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 490 (722)
Q Consensus 415 rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~----~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~ 490 (722)
.|++.++||+|+||+||++.+..+++.||+|++..... ......+|+.+++.++ ||||+++++.+...++
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~~~~~ 74 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVN------SRFVVSLAYAYETKDA 74 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcC------CCCEeeeeeeecCCCe
Confidence 48999999999999999999999999999999875321 1234567888888775 6799999999999999
Q ss_pred EEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCC
Q 004954 491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS 569 (722)
Q Consensus 491 l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGl 569 (722)
+++||||+.+ +|.+.+.... ...+++..+..++.|++.||.|||+.||+||||||+||+++. ++.++|+|||+
T Consensus 75 ~~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~--~~~~~l~Dfg~ 148 (285)
T cd05605 75 LCLVLTLMNGGDLKFHIYNMG----NPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDD--YGHIRISDLGL 148 (285)
T ss_pred EEEEEeccCCCcHHHHHHhcC----cCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECC--CCCEEEeeCCC
Confidence 9999999985 5554443221 123889999999999999999999999999999999999985 78899999999
Q ss_pred cccccCC--ccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 004954 570 SCFQTDN--LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 647 (722)
Q Consensus 570 s~~~~~~--~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~ 647 (722)
+...... .....+++.|+|||++.+..++.++||||+||++|+|++|+.||.+.........+...+..
T Consensus 149 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~--------- 219 (285)
T cd05605 149 AVEIPEGETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKE--------- 219 (285)
T ss_pred ceecCCCCccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhh---------
Confidence 8765332 22357899999999999989999999999999999999999999876543333222211000
Q ss_pred hhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCc-----CHHHHHhCCCCCC
Q 004954 648 QEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRP-----TAREALDHPWLQH 720 (722)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRp-----Ta~ElL~HPwf~~ 720 (722)
....++ ...+..+.+||.+||+.||.+|| +++++++||||..
T Consensus 220 ----------------------~~~~~~---------~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~ 266 (285)
T cd05605 220 ----------------------DQEEYS---------EKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRT 266 (285)
T ss_pred ----------------------cccccC---------cccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccC
Confidence 000011 12345688999999999999999 9999999999975
No 109
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=7.6e-38 Score=337.46 Aligned_cols=243 Identities=27% Similarity=0.422 Sum_probs=197.4
Q ss_pred EEeccCCCCceEEEEEC---CCCcEEEEEEeecch-----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 004954 420 EYLGSAAFSKVFQAQDL---HTGVDVCLKIIKNDK-----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (722)
Q Consensus 420 ~~LG~G~fG~Vy~a~d~---~tg~~vAvKil~~~~-----~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (722)
+.||+|+||.||++++. .+++.||+|+++... .......+|+.+++.++ ||||+++++.|...+..
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~------hp~iv~~~~~~~~~~~~ 75 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVK------HPFIVDLIYAFQTGGKL 75 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCC------CCchhceeeEEecCCeE
Confidence 67999999999999863 578999999987532 22234567888887774 78999999999999999
Q ss_pred EEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCc
Q 004954 492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (722)
Q Consensus 492 ~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 570 (722)
++||||+.+ +|.+.+.... .+.+..+..++.||+.||.|||++||+||||||+|||++. ++.+||+|||++
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~--~~~~kl~Dfg~~ 147 (323)
T cd05584 76 YLILEYLSGGELFMHLEREG------IFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDA--QGHVKLTDFGLC 147 (323)
T ss_pred EEEEeCCCCchHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECC--CCCEEEeeCcCC
Confidence 999999985 5666554322 2788889999999999999999999999999999999986 788999999998
Q ss_pred ccccC---CccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 004954 571 CFQTD---NLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 647 (722)
Q Consensus 571 ~~~~~---~~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~ 647 (722)
..... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||...+....+..+....
T Consensus 148 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~----------- 216 (323)
T cd05584 148 KESIHEGTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGK----------- 216 (323)
T ss_pred eecccCCCcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC-----------
Confidence 64322 2233578999999999999889999999999999999999999998877655555443110
Q ss_pred hhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCc-----CHHHHHhCCCCCC
Q 004954 648 QEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRP-----TAREALDHPWLQH 720 (722)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRp-----Ta~ElL~HPwf~~ 720 (722)
..+| ...+..+.+||++||+.||++|| ++.++++||||+.
T Consensus 217 ------------------------~~~~---------~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~ 261 (323)
T cd05584 217 ------------------------LNLP---------PYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRH 261 (323)
T ss_pred ------------------------CCCC---------CCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCC
Confidence 0111 11245688999999999999999 8999999999975
No 110
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=2e-37 Score=329.37 Aligned_cols=281 Identities=26% Similarity=0.431 Sum_probs=215.9
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchh---hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 004954 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (722)
Q Consensus 413 ~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~---~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (722)
.++|++.++||+|+||.||+|++..+++.||||++..... ......+|+.+++.++ ||||+++++++....
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~iv~~~~~~~~~~ 84 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLK------HENVVNLIEICRTKA 84 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCC------CCCccceEEEEeccc
Confidence 4679999999999999999999999999999998864321 2234456788887775 689999999987653
Q ss_pred --------eEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCe
Q 004954 490 --------HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCE 561 (722)
Q Consensus 490 --------~l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~ 561 (722)
..++||||+.+++.+.+.... ..+++.+++.++.||+.||.|||+.|++|+||||+||+++. ++.
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~l~~~l~~~~-----~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~--~~~ 157 (310)
T cd07865 85 TPYNRYKGSFYLVFEFCEHDLAGLLSNKN-----VKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITK--DGI 157 (310)
T ss_pred ccccCCCceEEEEEcCCCcCHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECC--CCc
Confidence 459999999988877765322 23899999999999999999999999999999999999985 788
Q ss_pred EEEEecCCcccccCCc-------cccccCCcccCchhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHH
Q 004954 562 IKIIDLGSSCFQTDNL-------CLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARII 633 (722)
Q Consensus 562 vkL~DFGls~~~~~~~-------~~~~gt~~y~APE~l~~~-~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~ 633 (722)
+||+|||++....... ....++..|+|||.+.+. .++.++||||||+++|+|++|++||.+.+....+..+.
T Consensus 158 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~ 237 (310)
T cd07865 158 LKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLIS 237 (310)
T ss_pred EEECcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 9999999886543221 223567889999998764 37889999999999999999999999988888888888
Q ss_pred hhcCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHH
Q 004954 634 GMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREAL 713 (722)
Q Consensus 634 ~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL 713 (722)
...|.++.+.+........+-..... .......+ ..+ .....+..+.+||.+||..||.+|||++++|
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~--~~l--~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l 305 (310)
T cd07865 238 QLCGSITPEVWPGVDKLELFKKMELP--------QGQKRKVK--ERL--KPYVKDPHALDLIDKLLVLDPAKRIDADTAL 305 (310)
T ss_pred HHhCCCChhhcccccchhhhhhccCC--------CccchhhH--Hhc--ccccCCHHHHHHHHHHhcCChhhccCHHHHh
Confidence 88888887766554322211100000 00000000 000 1112345688999999999999999999999
Q ss_pred hCCCC
Q 004954 714 DHPWL 718 (722)
Q Consensus 714 ~HPwf 718 (722)
+||||
T Consensus 306 ~h~~f 310 (310)
T cd07865 306 NHDFF 310 (310)
T ss_pred cCCCC
Confidence 99998
No 111
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=3.2e-37 Score=326.67 Aligned_cols=281 Identities=28% Similarity=0.451 Sum_probs=219.0
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCe
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 490 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~---~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~ 490 (722)
++|++.+.||.|++|+||+|.++.+|+.||+|.+.... .....+.+|+++++.++ |+||+++++++....+
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~ 75 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQ------HGNIVRLQDVVHSEKR 75 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhcc------CCCEeeEEEEEecCCe
Confidence 57999999999999999999999999999999886532 22345667888888775 6799999999999999
Q ss_pred EEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCc
Q 004954 491 LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (722)
Q Consensus 491 l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 570 (722)
.++||||+++++.+.+..... ..+++..++.++.||+.||+|||+++++|+||+|+||+++. .+..+||+|||++
T Consensus 76 ~~lv~e~~~~~l~~~~~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~-~~~~~kl~dfg~~ 150 (294)
T PLN00009 76 LYLVFEYLDLDLKKHMDSSPD----FAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDR-RTNALKLADFGLA 150 (294)
T ss_pred EEEEEecccccHHHHHHhCCC----CCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEEC-CCCEEEEcccccc
Confidence 999999999888877654322 22678889999999999999999999999999999999985 3567999999998
Q ss_pred ccccCC---ccccccCCcccCchhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhh
Q 004954 571 CFQTDN---LCLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQ 646 (722)
Q Consensus 571 ~~~~~~---~~~~~gt~~y~APE~l~~~-~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~ 646 (722)
...... .....+++.|+|||.+.+. .++.++|||||||++|+|++|++||...+..+.+.++....+.+....|..
T Consensus 151 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (294)
T PLN00009 151 RAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPG 230 (294)
T ss_pred cccCCCccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccc
Confidence 654322 2234567899999998764 578999999999999999999999998877777777777777666555543
Q ss_pred hhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCCC
Q 004954 647 GQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 720 (722)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~~ 720 (722)
......+... .. ..+ ...+.......++.+.++|.+||+.+|++||++.++|+||||+.
T Consensus 231 ~~~~~~~~~~-------------~~-~~~-~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~ 289 (294)
T PLN00009 231 VTSLPDYKSA-------------FP-KWP-PKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKD 289 (294)
T ss_pred cccchhhhhh-------------cc-cCC-CCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHhH
Confidence 3222222110 00 000 01111122334567899999999999999999999999999975
No 112
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=1.5e-37 Score=331.60 Aligned_cols=287 Identities=29% Similarity=0.497 Sum_probs=216.3
Q ss_pred cEEEEEEeccCCCCceEEEEECC--CCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec
Q 004954 415 RYYVTEYLGSAAFSKVFQAQDLH--TGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 488 (722)
Q Consensus 415 rY~i~~~LG~G~fG~Vy~a~d~~--tg~~vAvKil~~~~----~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~ 488 (722)
+|++.++||+|+||.||+|.+.. +++.||+|++.... .......+|+.+++.++ ||||+++++++...
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~ 74 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELK------HENVVSLVEVFLEH 74 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcC------CCCccceEEEEeCC
Confidence 58999999999999999999988 89999999987632 23355677888888775 68999999999988
Q ss_pred --CeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEccc--CCCeEEE
Q 004954 489 --EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSY--QRCEIKI 564 (722)
Q Consensus 489 --~~l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~--~~~~vkL 564 (722)
..+++||||+++++.+++....... ...+++..++.++.||+.||.|||+.+|+||||||+||+++.+ .++.+||
T Consensus 75 ~~~~~~lv~e~~~~~l~~~~~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl 153 (316)
T cd07842 75 ADKSVYLLFDYAEHDLWQIIKFHRQAK-RVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKI 153 (316)
T ss_pred CCceEEEEEeCCCcCHHHHHHhhccCC-CcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEE
Confidence 8899999999998888776443321 2348999999999999999999999999999999999999841 2678999
Q ss_pred EecCCcccccCCcc------ccccCCcccCchhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCChH---------HHH
Q 004954 565 IDLGSSCFQTDNLC------LYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAV---------VMI 628 (722)
Q Consensus 565 ~DFGls~~~~~~~~------~~~gt~~y~APE~l~~~-~~s~ksDIWSLGviL~elltG~~PF~~~~~---------~e~ 628 (722)
+|||++........ ...+++.|+|||++.+. .++.++|||||||++|+|++|++||.+... ...
T Consensus 154 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 233 (316)
T cd07842 154 GDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQ 233 (316)
T ss_pred CCCccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHH
Confidence 99999876543322 24568889999998764 578999999999999999999999976433 235
Q ss_pred HHHHHhhcCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhc---ccCcHHHHHHHHHhcccCCCC
Q 004954 629 LARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHL---QFSDAFFIDFVRTLLEINPQR 705 (722)
Q Consensus 629 l~~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~---~~~~~~l~dLL~~mL~~dP~k 705 (722)
+..+...++.++...+........+.... .. ......+. ..+.... ...+..+.++|.+||+.||++
T Consensus 234 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-------~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~ 303 (316)
T cd07842 234 LERIFEVLGTPTEKDWPDIKKMPEYDTLM-------KD--FKTKTYPS-NSLAKWMEKHKKPDSQGFDLLRKLLEYDPTK 303 (316)
T ss_pred HHHHHHHhCCCchhHHHHHhhcccchhhh-------hh--ccCCCCCC-ccHHHHHHhccCCCHHHHHHHHHHhcCCccc
Confidence 56666777766655554333222211100 00 00001110 1111111 134567899999999999999
Q ss_pred CcCHHHHHhCCCC
Q 004954 706 RPTAREALDHPWL 718 (722)
Q Consensus 706 RpTa~ElL~HPwf 718 (722)
|||+.|+++||||
T Consensus 304 Rps~~eil~~~~f 316 (316)
T cd07842 304 RITAEEALEHPYF 316 (316)
T ss_pred CcCHHHHhcCCCC
Confidence 9999999999998
No 113
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=1.8e-37 Score=335.84 Aligned_cols=255 Identities=22% Similarity=0.336 Sum_probs=200.2
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~----~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (722)
++|++.+.||+|+||+||++++..+++.||+|++.+.. .....+.+|..+++.+ .|+||++++++|...+
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~------~~~~i~~~~~~~~~~~ 74 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNG------DRRWITNLHYAFQDEN 74 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhC------CCCCCCceEEEEecCC
Confidence 47999999999999999999999999999999997532 2233455667776655 4789999999999999
Q ss_pred eEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecC
Q 004954 490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (722)
Q Consensus 490 ~l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFG 568 (722)
++++||||+.+ +|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++. ++.+||+|||
T Consensus 75 ~~~lv~e~~~g~~L~~~l~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~--~~~~kl~Dfg 147 (331)
T cd05597 75 NLYLVMDYYVGGDLLTLLSKFE-----DRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDK--NGHIRLADFG 147 (331)
T ss_pred eEEEEEecCCCCcHHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECC--CCCEEEEECC
Confidence 99999999974 6777665322 12889999999999999999999999999999999999985 7889999999
Q ss_pred CcccccCCc----cccccCCcccCchhhcC-----CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCC
Q 004954 569 SSCFQTDNL----CLYVQSRSYRAPEVIIG-----LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPI 639 (722)
Q Consensus 569 ls~~~~~~~----~~~~gt~~y~APE~l~~-----~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~ 639 (722)
++....... ....||+.|+|||++.. ..++.++|||||||++|+|++|+.||.+.+..+.+..+.....
T Consensus 148 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~-- 225 (331)
T cd05597 148 SCLRLLADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKE-- 225 (331)
T ss_pred ceeecCCCCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCC--
Confidence 986543321 22468999999999973 3577899999999999999999999988776666555431110
Q ss_pred cHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCC--CcCHHHHHhCCC
Q 004954 640 DLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQR--RPTAREALDHPW 717 (722)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~k--RpTa~ElL~HPw 717 (722)
...+|.. ....+..+++||++||..++.+ |+++.++++|||
T Consensus 226 -------------------------------~~~~~~~------~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~ 268 (331)
T cd05597 226 -------------------------------HFQFPPD------VTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPF 268 (331)
T ss_pred -------------------------------cccCCCc------cCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCCC
Confidence 0001110 1113467889999999764444 789999999999
Q ss_pred CCC
Q 004954 718 LQH 720 (722)
Q Consensus 718 f~~ 720 (722)
|..
T Consensus 269 ~~~ 271 (331)
T cd05597 269 FEG 271 (331)
T ss_pred CCC
Confidence 964
No 114
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.2e-37 Score=351.45 Aligned_cols=279 Identities=24% Similarity=0.298 Sum_probs=205.4
Q ss_pred ecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 004954 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (722)
Q Consensus 412 l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (722)
...+|.+.+.||+|+||.||++.+..+++.||||.... ....+|+++++.++ |+||+++++++...+..
T Consensus 167 ~~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~-----~~~~~E~~iL~~L~------HpnIv~l~~~~~~~~~~ 235 (461)
T PHA03211 167 AGLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY-----ASSVHEARLLRRLS------HPAVLALLDVRVVGGLT 235 (461)
T ss_pred ccCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc-----cCHHHHHHHHHHCC------CCCCCcEEEEEEECCEE
Confidence 45689999999999999999999999999999996432 34568999998885 68999999999999999
Q ss_pred EEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCcc
Q 004954 492 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 571 (722)
Q Consensus 492 ~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~ 571 (722)
++|||++.++|+.++..... .+++..++.|+.||+.||.|||+.||+||||||+||||+. ++.+||+|||+++
T Consensus 236 ~lv~e~~~~~L~~~l~~~~~-----~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~--~~~vkL~DFGla~ 308 (461)
T PHA03211 236 CLVLPKYRSDLYTYLGARLR-----PLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNG--PEDICLGDFGAAC 308 (461)
T ss_pred EEEEEccCCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECC--CCCEEEcccCCce
Confidence 99999999998888764322 3899999999999999999999999999999999999985 7789999999987
Q ss_pred cccCCc-----cccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC-C------hHHHHHHHHHhhcCCC
Q 004954 572 FQTDNL-----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPN-D------AVVMILARIIGMLGPI 639 (722)
Q Consensus 572 ~~~~~~-----~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~-~------~~~e~l~~i~~~lg~~ 639 (722)
...... ....||+.|+|||++.+..++.++|||||||+||||++|..|+-. . .....+.+++...+..
T Consensus 309 ~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~ 388 (461)
T PHA03211 309 FARGSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVH 388 (461)
T ss_pred ecccccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccc
Confidence 643321 234689999999999999999999999999999999998765422 1 1122233333222211
Q ss_pred cHHHHhh--hhhhhhhhcccccchhhhhccccccccCCc-cchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCC
Q 004954 640 DLEMLMQ--GQEIYKYFTKEYDLYYINEETNQLEYIIPE-ESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHP 716 (722)
Q Consensus 640 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~-~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HP 716 (722)
..+.... ......+.. .......+. ....+......+..+.+||.+||+.||.+|||+.|||+||
T Consensus 389 ~~~~~~~~~~~l~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp 456 (461)
T PHA03211 389 VDEFPQHAGSRLVSQYRH------------RAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLP 456 (461)
T ss_pred cccCCCCcchHHHHHHHh------------hhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCc
Confidence 1000000 000000000 000000000 0000111122345688999999999999999999999999
Q ss_pred CCCC
Q 004954 717 WLQH 720 (722)
Q Consensus 717 wf~~ 720 (722)
||++
T Consensus 457 ~f~~ 460 (461)
T PHA03211 457 LFQS 460 (461)
T ss_pred ccCC
Confidence 9986
No 115
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=1.1e-37 Score=337.38 Aligned_cols=245 Identities=23% Similarity=0.357 Sum_probs=192.5
Q ss_pred EEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEE
Q 004954 420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVC 495 (722)
Q Consensus 420 ~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~----~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~iVm 495 (722)
+.||+|+||+||++++..+++.+|+|++++.. .......+|+.++..+. .||||+++++++...+..++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~-----~hp~iv~~~~~~~~~~~~~lv~ 75 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS-----NHPFLVGLHSCFQTESRLFFVI 75 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcC-----CCCcCCceeeEEEeCCEEEEEE
Confidence 36999999999999999999999999997532 23344566777666553 4789999999999999999999
Q ss_pred Ecccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCccccc
Q 004954 496 ELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT 574 (722)
Q Consensus 496 Ey~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~ 574 (722)
||+.+ +|...+... ..+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||++....
T Consensus 76 E~~~~~~L~~~~~~~------~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~--~~~~kL~DfG~~~~~~ 147 (329)
T cd05618 76 EYVNGGDLMFHMQRQ------RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDS--EGHIKLTDYGMCKEGL 147 (329)
T ss_pred eCCCCCCHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECC--CCCEEEeeCCcccccc
Confidence 99986 454444322 23889999999999999999999999999999999999986 7889999999986432
Q ss_pred ---CCccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChH--------HHHHHHHHhhcCCCcHHH
Q 004954 575 ---DNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAV--------VMILARIIGMLGPIDLEM 643 (722)
Q Consensus 575 ---~~~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~--------~e~l~~i~~~lg~~~~~~ 643 (722)
.......||+.|+|||++.+..++.++|||||||++|+|++|+.||..... ...+.+.+
T Consensus 148 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i---------- 217 (329)
T cd05618 148 RPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI---------- 217 (329)
T ss_pred CCCCccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHH----------
Confidence 223346789999999999999999999999999999999999999953110 00000000
Q ss_pred HhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcC------HHHHHhCCC
Q 004954 644 LMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPT------AREALDHPW 717 (722)
Q Consensus 644 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpT------a~ElL~HPw 717 (722)
......+|. ..+..+.+||++||+.||.+||+ +.++++|||
T Consensus 218 ------------------------~~~~~~~p~---------~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~ 264 (329)
T cd05618 218 ------------------------LEKQIRIPR---------SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPF 264 (329)
T ss_pred ------------------------hcCCCCCCC---------CCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCC
Confidence 000111221 23466889999999999999998 589999999
Q ss_pred CCC
Q 004954 718 LQH 720 (722)
Q Consensus 718 f~~ 720 (722)
|+.
T Consensus 265 f~~ 267 (329)
T cd05618 265 FRN 267 (329)
T ss_pred CCC
Confidence 975
No 116
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=7.1e-39 Score=326.22 Aligned_cols=293 Identities=29% Similarity=0.438 Sum_probs=232.4
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCc----EEEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEE
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGV----DVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY 486 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~----~vAvKil~~~~---~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~ 486 (722)
..|+++++||+|.||.||+|..+.++. .+|||.++..+ .......+|+.++++++ ||||+.+..+|.
T Consensus 24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~------h~nvi~Lv~Vfl 97 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELK------HPNVISLVKVFL 97 (438)
T ss_pred HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhc------CCcchhHHHHHh
Confidence 468999999999999999996554432 68999998653 23456789999999997 679999999998
Q ss_pred e-cCeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEccc--CCCeEE
Q 004954 487 H-LEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSY--QRCEIK 563 (722)
Q Consensus 487 ~-~~~l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~--~~~~vk 563 (722)
. +..+++++||.+.+|+..++....... ..++...+..|+.||+.|+.|||++.|+||||||.||||..+ ..|.||
T Consensus 98 ~~d~~v~l~fdYAEhDL~~II~fHr~~~~-~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VK 176 (438)
T KOG0666|consen 98 SHDKKVWLLFDYAEHDLWHIIKFHRASKA-KQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVK 176 (438)
T ss_pred ccCceEEEEehhhhhhHHHHHHHhccchh-ccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeE
Confidence 7 678999999999999999998877655 569999999999999999999999999999999999999752 248999
Q ss_pred EEecCCcccccCCccc------cccCCcccCchhhcCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCh---------HHH
Q 004954 564 IIDLGSSCFQTDNLCL------YVQSRSYRAPEVIIGLP-YDQKIDLWSLGCILAELWTGEVLFPNDA---------VVM 627 (722)
Q Consensus 564 L~DFGls~~~~~~~~~------~~gt~~y~APE~l~~~~-~s~ksDIWSLGviL~elltG~~PF~~~~---------~~e 627 (722)
|+|||+++....+... .+-|.+|+|||.++|.. |+.++|||++|||+.||+|-++.|.+.. ..+
T Consensus 177 IaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~d 256 (438)
T KOG0666|consen 177 IADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHD 256 (438)
T ss_pred eecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHH
Confidence 9999999987776443 45689999999999865 8999999999999999999999996532 356
Q ss_pred HHHHHHhhcCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCc
Q 004954 628 ILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRP 707 (722)
Q Consensus 628 ~l~~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRp 707 (722)
.+.+|...+|.+..+.|+....+.+|...-.+.. . . .+..-....+-+..+..++...+||.+||+.||.+|.
T Consensus 257 Ql~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~---~--~--~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRI 329 (438)
T KOG0666|consen 257 QLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFR---R--H--YYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRI 329 (438)
T ss_pred HHHHHHHHcCCCccccchhhhhCcchHHHHHHhH---H--h--hcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhc
Confidence 8899999999998888877666555422111000 0 0 0000000111122233445578999999999999999
Q ss_pred CHHHHHhCCCCCC
Q 004954 708 TAREALDHPWLQH 720 (722)
Q Consensus 708 Ta~ElL~HPwf~~ 720 (722)
|++++|+|+||..
T Consensus 330 ta~qAleh~yF~~ 342 (438)
T KOG0666|consen 330 TAEQALEHPYFTE 342 (438)
T ss_pred cHHHHhccccccc
Confidence 9999999999964
No 117
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=5e-38 Score=342.98 Aligned_cols=251 Identities=25% Similarity=0.312 Sum_probs=195.2
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~--~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (722)
..|+++++||+|+||+||++++..+++.||||++.... .....+.+|+++++.++ |+||+++++++...+.+
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~~~~~~ 147 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVN------HPNVVKCHDMFDHNGEI 147 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCC------CCCcceeeeEeccCCeE
Confidence 56788899999999999999999999999999986532 33456778888888774 78999999999999999
Q ss_pred EEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCcc
Q 004954 492 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 571 (722)
Q Consensus 492 ~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~ 571 (722)
++||||+.++.+.. .....+..+..++.||+.||.|||++||+||||||+|||++. ++.+||+|||++.
T Consensus 148 ~lv~e~~~~~~L~~---------~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~--~~~~kL~DfG~~~ 216 (353)
T PLN00034 148 QVLLEFMDGGSLEG---------THIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINS--AKNVKIADFGVSR 216 (353)
T ss_pred EEEEecCCCCcccc---------cccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcC--CCCEEEcccccce
Confidence 99999998754321 112567788899999999999999999999999999999986 7889999999987
Q ss_pred cccCC---ccccccCCcccCchhhcC-----CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHH
Q 004954 572 FQTDN---LCLYVQSRSYRAPEVIIG-----LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEM 643 (722)
Q Consensus 572 ~~~~~---~~~~~gt~~y~APE~l~~-----~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~ 643 (722)
..... .....||+.|+|||++.. ...+.++|||||||++|+|++|+.||......+....+....
T Consensus 217 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~------- 289 (353)
T PLN00034 217 ILAQTMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAIC------- 289 (353)
T ss_pred ecccccccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHh-------
Confidence 65432 234578999999998743 234568999999999999999999997432211111110000
Q ss_pred HhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCCCC
Q 004954 644 LMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQHP 721 (722)
Q Consensus 644 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~~~ 721 (722)
....... ....+..+.+||.+||+.||++|||+.|+|+||||.+.
T Consensus 290 ------------------------~~~~~~~---------~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~~ 334 (353)
T PLN00034 290 ------------------------MSQPPEA---------PATASREFRHFISCCLQREPAKRWSAMQLLQHPFILRA 334 (353)
T ss_pred ------------------------ccCCCCC---------CCccCHHHHHHHHHHccCChhhCcCHHHHhcCcccccC
Confidence 0000000 11234678999999999999999999999999999764
No 118
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-37 Score=338.56 Aligned_cols=245 Identities=29% Similarity=0.412 Sum_probs=199.2
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcE-EEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVD-VCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~-vAvKil~~~~---~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (722)
....+.+.||+|+||+||++.+. |+. ||||++.... .....+.+|+.+|.+++ |||||+++|++....
T Consensus 41 ~~l~~~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~------HpNIV~f~G~~~~~~ 112 (362)
T KOG0192|consen 41 DELPIEEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDESRKAFRREASLLSRLR------HPNIVQFYGACTSPP 112 (362)
T ss_pred HHhhhhhhcccCCceeEEEEEeC--CceeEEEEEecchhcChHHHHHHHHHHHHHHhCC------CCCeeeEEEEEcCCC
Confidence 34556666999999999999874 555 9999997543 22457889999999875 789999999999887
Q ss_pred -eEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCC-CccccCCCCceEEcccCCC-eEEEE
Q 004954 490 -HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLG-IIHCDLKPENILIKSYQRC-EIKII 565 (722)
Q Consensus 490 -~l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~g-IvHrDLKp~NILl~~~~~~-~vkL~ 565 (722)
.++|||||+++ +|..++... ....+++..+..|+.||+.||.|||+++ ||||||||+||||+. +. ++||+
T Consensus 113 ~~~~iVtEy~~~GsL~~~l~~~----~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~--~~~~~KI~ 186 (362)
T KOG0192|consen 113 GSLCIVTEYMPGGSLSVLLHKK----RKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDL--KGKTLKIA 186 (362)
T ss_pred CceEEEEEeCCCCcHHHHHhhc----ccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcC--CCCEEEEC
Confidence 79999999985 566666543 1233999999999999999999999999 999999999999996 65 99999
Q ss_pred ecCCcccccC---CccccccCCcccCchhhc--CCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCc
Q 004954 566 DLGSSCFQTD---NLCLYVQSRSYRAPEVII--GLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPID 640 (722)
Q Consensus 566 DFGls~~~~~---~~~~~~gt~~y~APE~l~--~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~ 640 (722)
|||+++.... ..+...||+.|||||++. ..+|+.++||||||+++|||+||+.||.+.........++..
T Consensus 187 DFGlsr~~~~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~----- 261 (362)
T KOG0192|consen 187 DFGLSREKVISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVG----- 261 (362)
T ss_pred CCccceeeccccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhc-----
Confidence 9999987664 333468999999999999 568999999999999999999999999998775555554421
Q ss_pred HHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHh
Q 004954 641 LEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 714 (722)
Q Consensus 641 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~ 714 (722)
..+..+|.. .++.+..||.+||..||.+||+..+++.
T Consensus 262 ----------------------------~~Rp~~p~~---------~~~~l~~l~~~CW~~dp~~RP~f~ei~~ 298 (362)
T KOG0192|consen 262 ----------------------------GLRPPIPKE---------CPPHLSSLMERCWLVDPSRRPSFLEIVS 298 (362)
T ss_pred ----------------------------CCCCCCCcc---------CCHHHHHHHHHhCCCCCCcCCCHHHHHH
Confidence 112222221 3467899999999999999999999874
No 119
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=9.3e-38 Score=336.59 Aligned_cols=243 Identities=25% Similarity=0.371 Sum_probs=193.9
Q ss_pred EEeccCCCCceEEEEECCCCcEEEEEEeecchh----hhHhHHHHHHH-HHHhcccCCCCCCceeEEEEEEEecCeEEEE
Q 004954 420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD----FFDQSLDEIKL-LKLVNKNDPADEHHILRLYDYFYHLEHLFIV 494 (722)
Q Consensus 420 ~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~----~~~~~~~E~~i-l~~L~~~~~~~hpnIv~l~~~f~~~~~l~iV 494 (722)
+.||+|+||+||+|++..+|+.||||++..... .......|..+ ++. ..||||+++++.+...+..++|
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~------l~hp~iv~~~~~~~~~~~~~lv 74 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKN------VKHPFLVGLHYSFQTADKLYFV 74 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhh------CCCCCCCCeeEEEEeCCEEEEE
Confidence 369999999999999999999999999875421 12223333332 222 3589999999999999999999
Q ss_pred EEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCcccc
Q 004954 495 CELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQ 573 (722)
Q Consensus 495 mEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~ 573 (722)
|||+.+ +|...+.... .+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||++...
T Consensus 75 ~e~~~~g~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~--~~~~kl~Dfg~~~~~ 146 (323)
T cd05575 75 LDYVNGGELFFHLQRER------SFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDS--QGHVVLTDFGLCKEG 146 (323)
T ss_pred EcCCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECC--CCcEEEeccCCCccc
Confidence 999986 5555554322 3889999999999999999999999999999999999986 788999999998643
Q ss_pred cC---CccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhh
Q 004954 574 TD---NLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEI 650 (722)
Q Consensus 574 ~~---~~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~~~ 650 (722)
.. ......||+.|+|||++.+..++.++|||||||++|+|++|..||...+..+....+....
T Consensus 147 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~-------------- 212 (323)
T cd05575 147 IEHSKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKP-------------- 212 (323)
T ss_pred ccCCCccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCC--------------
Confidence 22 2234578999999999999999999999999999999999999998877666655543110
Q ss_pred hhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCH----HHHHhCCCCCC
Q 004954 651 YKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTA----REALDHPWLQH 720 (722)
Q Consensus 651 ~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa----~ElL~HPwf~~ 720 (722)
..++ ...+..+.+||++||+.||.+||++ .++++||||..
T Consensus 213 ---------------------~~~~---------~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~ 256 (323)
T cd05575 213 ---------------------LRLK---------PNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSS 256 (323)
T ss_pred ---------------------CCCC---------CCCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCC
Confidence 0001 1124568899999999999999998 69999999964
No 120
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=3e-37 Score=326.74 Aligned_cols=278 Identities=28% Similarity=0.428 Sum_probs=220.1
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchh---hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec--
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL-- 488 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~---~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~-- 488 (722)
++|++.+.||.|+||.||+|.+..+++.+|+|.++.... ......+|+.+++.++ ||||+++++++...
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~------h~ni~~~~~~~~~~~~ 78 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQ------HPNIVTVKEVVVGSNL 78 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcC------CCCEEEEEEEEEecCC
Confidence 579999999999999999999999999999999875432 2234567888887774 78999999999877
Q ss_pred CeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecC
Q 004954 489 EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (722)
Q Consensus 489 ~~l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFG 568 (722)
...++||||+.++|.+++..... .+++..++.++.||+.||+|||+.|++|+||||+||+++. ++.++|+|||
T Consensus 79 ~~~~lv~e~~~~~L~~~~~~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~--~~~~~l~d~g 151 (293)
T cd07843 79 DKIYMVMEYVEHDLKSLMETMKQ-----PFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNN--RGILKICDFG 151 (293)
T ss_pred CcEEEEehhcCcCHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECC--CCcEEEeecC
Confidence 89999999999888887764332 3899999999999999999999999999999999999996 7889999999
Q ss_pred CcccccCC---ccccccCCcccCchhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHH
Q 004954 569 SSCFQTDN---LCLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEML 644 (722)
Q Consensus 569 ls~~~~~~---~~~~~gt~~y~APE~l~~~-~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~ 644 (722)
++...... .....+++.|+|||.+.+. .++.++||||||+++|+|++|.+||......+.+.++....+.+....+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 231 (293)
T cd07843 152 LAREYGSPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIW 231 (293)
T ss_pred ceeeccCCccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHH
Confidence 88765443 2234568889999998764 4688999999999999999999999998888888888888887776666
Q ss_pred hhhhhhhhhhcccccchhhhhccccccccCCccchhhhhccc--CcHHHHHHHHHhcccCCCCCcCHHHHHhCCCC
Q 004954 645 MQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQF--SDAFFIDFVRTLLEINPQRRPTAREALDHPWL 718 (722)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~--~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf 718 (722)
.....+......... .+....+....+. .+..+.+||++||+.||++|||+.|+|+||||
T Consensus 232 ~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~f 293 (293)
T cd07843 232 PGFSELPGAKKKTFT--------------KYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF 293 (293)
T ss_pred HHhhccchhcccccc--------------cccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence 544332221110000 0000111111111 25678899999999999999999999999998
No 121
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=1.4e-37 Score=342.39 Aligned_cols=254 Identities=22% Similarity=0.346 Sum_probs=202.5
Q ss_pred ecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 004954 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 487 (722)
Q Consensus 412 l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~----~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~ 487 (722)
..++|++.+.||+|+||.||+++++.+++.+|+|++.... .....+.+|..+++.+ .||||+++++.+..
T Consensus 41 ~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~------~hp~iv~~~~~~~~ 114 (371)
T cd05622 41 KAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA------NSPWVVQLFYAFQD 114 (371)
T ss_pred chhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhC------CCCCCCeEEEEEEc
Confidence 3478999999999999999999999999999999986422 2223455677777665 47899999999999
Q ss_pred cCeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEe
Q 004954 488 LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIID 566 (722)
Q Consensus 488 ~~~l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~D 566 (722)
...+++||||+.+ +|.+++... .+++..+..++.||+.||+|||++||+||||||+|||++. ++.+||+|
T Consensus 115 ~~~~~lv~Ey~~gg~L~~~~~~~-------~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~--~~~ikL~D 185 (371)
T cd05622 115 DRYLYMVMEYMPGGDLVNLMSNY-------DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDK--SGHLKLAD 185 (371)
T ss_pred CCEEEEEEcCCCCCcHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECC--CCCEEEEe
Confidence 9999999999975 566665422 2788899999999999999999999999999999999986 78899999
Q ss_pred cCCcccccCC----ccccccCCcccCchhhcCCC----CCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCC
Q 004954 567 LGSSCFQTDN----LCLYVQSRSYRAPEVIIGLP----YDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGP 638 (722)
Q Consensus 567 FGls~~~~~~----~~~~~gt~~y~APE~l~~~~----~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~ 638 (722)
||++...... ....+||+.|+|||++.+.. ++.++|||||||++|+|++|..||.+.+....+.++......
T Consensus 186 fG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~ 265 (371)
T cd05622 186 FGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNS 265 (371)
T ss_pred CCceeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCc
Confidence 9998765432 22457899999999997643 788999999999999999999999988776666555421110
Q ss_pred CcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCC--CcCHHHHHhCC
Q 004954 639 IDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQR--RPTAREALDHP 716 (722)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~k--RpTa~ElL~HP 716 (722)
+ .+|.. ...+..+++||.+||+.++.+ |+++.++++||
T Consensus 266 ~---------------------------------~~~~~-------~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~ 305 (371)
T cd05622 266 L---------------------------------TFPDD-------NDISKEAKNLICAFLTDREVRLGRNGVEEIKRHL 305 (371)
T ss_pred c---------------------------------cCCCc-------CCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCc
Confidence 0 11111 123466889999999854443 78999999999
Q ss_pred CCCC
Q 004954 717 WLQH 720 (722)
Q Consensus 717 wf~~ 720 (722)
||++
T Consensus 306 ~~~~ 309 (371)
T cd05622 306 FFKN 309 (371)
T ss_pred ccCC
Confidence 9975
No 122
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=5.6e-37 Score=322.25 Aligned_cols=276 Identities=30% Similarity=0.502 Sum_probs=217.6
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEE
Q 004954 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF 492 (722)
Q Consensus 415 rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~--~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~ 492 (722)
+|++.+.||.|++|.||+|++..+|+.||||+++... .......+|+.+++.++ |+||+++++.+...+..+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~------h~~i~~~~~~~~~~~~~~ 74 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELK------HENIVRLHDVIHTENKLM 74 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhc------CCCEeeeeeeEeeCCcEE
Confidence 5899999999999999999999999999999987543 22355667888888775 679999999999999999
Q ss_pred EEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCccc
Q 004954 493 IVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF 572 (722)
Q Consensus 493 iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~ 572 (722)
+||||+.+++.+++..... ...+++..+..++.||+.||.|||+.|++|+||||+||+++. ++.++|+|||++..
T Consensus 75 lv~e~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~--~~~~~l~d~g~~~~ 149 (284)
T cd07836 75 LVFEYMDKDLKKYMDTHGV---RGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINK--RGELKLADFGLARA 149 (284)
T ss_pred EEEecCCccHHHHHHhcCC---CCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECC--CCcEEEeecchhhh
Confidence 9999999988887764332 234899999999999999999999999999999999999985 78899999999865
Q ss_pred ccCCc---cccccCCcccCchhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhh
Q 004954 573 QTDNL---CLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQ 648 (722)
Q Consensus 573 ~~~~~---~~~~gt~~y~APE~l~~~-~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~ 648 (722)
..... ....+++.|+|||++.+. .++.++|||||||++|+|++|+.||.+.+..+.+.++......+....+....
T Consensus 150 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (284)
T cd07836 150 FGIPVNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGIS 229 (284)
T ss_pred hcCCccccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHh
Confidence 43321 224568889999998764 57889999999999999999999999888888777777666655555443332
Q ss_pred hhhhhhcccccchhhhhccccccccCCcc--chhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCC
Q 004954 649 EIYKYFTKEYDLYYINEETNQLEYIIPEE--SSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 718 (722)
Q Consensus 649 ~~~~~~~~~~~~~~~~~~~~~~~~~ip~~--~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf 718 (722)
....+.. ..|.. ..........+..+.++|.+||+.||.+||++.++++||||
T Consensus 230 ~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f 284 (284)
T cd07836 230 QLPEYKP-----------------TFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF 284 (284)
T ss_pred cCchhcc-----------------cccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 2111110 01100 01111112235678999999999999999999999999998
No 123
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=2.4e-37 Score=334.43 Aligned_cols=280 Identities=30% Similarity=0.454 Sum_probs=220.7
Q ss_pred eecCcEEEE-EEeccCCCCceEEEEECCCCcEEEEEEeecchhhh---------------HhHHHHHHHHHHhcccCCCC
Q 004954 411 VIAGRYYVT-EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFF---------------DQSLDEIKLLKLVNKNDPAD 474 (722)
Q Consensus 411 ~l~~rY~i~-~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~~~---------------~~~~~E~~il~~L~~~~~~~ 474 (722)
.+.+||.++ +.||+|+||+||+|.+..+++.||||+++...... ..+.+|+.+++.++
T Consensus 5 ~~~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~------ 78 (335)
T PTZ00024 5 SISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIK------ 78 (335)
T ss_pred ccccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCC------
Confidence 456788754 67999999999999999999999999986532211 13567888887775
Q ss_pred CCceeEEEEEEEecCeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEE
Q 004954 475 EHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILI 554 (722)
Q Consensus 475 hpnIv~l~~~f~~~~~l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl 554 (722)
|+||+++++++...+..++||||+.+++.+.+.... .+++..+..++.||+.||+|||+.||+|+||+|+||++
T Consensus 79 h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~------~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill 152 (335)
T PTZ00024 79 HENIMGLVDVYVEGDFINLVMDIMASDLKKVVDRKI------RLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFI 152 (335)
T ss_pred CcceeeeeEEEecCCcEEEEEeccccCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEE
Confidence 689999999999999999999999998888775322 28899999999999999999999999999999999999
Q ss_pred cccCCCeEEEEecCCcccccC-----------------CccccccCCcccCchhhcCC-CCCchhhHHHHHHHHHHHHhC
Q 004954 555 KSYQRCEIKIIDLGSSCFQTD-----------------NLCLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTG 616 (722)
Q Consensus 555 ~~~~~~~vkL~DFGls~~~~~-----------------~~~~~~gt~~y~APE~l~~~-~~s~ksDIWSLGviL~elltG 616 (722)
+. ++.++|+|||.+..... ......+++.|+|||.+.+. .++.++|+|||||++|+|++|
T Consensus 153 ~~--~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg 230 (335)
T PTZ00024 153 NS--KGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTG 230 (335)
T ss_pred CC--CCCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhC
Confidence 86 77899999998865441 11123457789999998764 468999999999999999999
Q ss_pred CCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHH
Q 004954 617 EVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVR 696 (722)
Q Consensus 617 ~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~ 696 (722)
.+||.+.+..+.+..+...++.++..+|........+.. .....+ ..........+..+.+||.
T Consensus 231 ~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~--~~~~~~~~~~~~~~~~li~ 294 (335)
T PTZ00024 231 KPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTE--------------FTPRKP--KDLKTIFPNASDDAIDLLQ 294 (335)
T ss_pred CCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccc--------------cCcCCc--ccHHHhCcCCChHHHHHHH
Confidence 999999888888888888888777665544332211110 000001 1112222334567899999
Q ss_pred HhcccCCCCCcCHHHHHhCCCCCC
Q 004954 697 TLLEINPQRRPTAREALDHPWLQH 720 (722)
Q Consensus 697 ~mL~~dP~kRpTa~ElL~HPwf~~ 720 (722)
+||+.+|++|||++|+|.||||+.
T Consensus 295 ~~l~~~P~~R~s~~~~l~~~~~~~ 318 (335)
T PTZ00024 295 SLLKLNPLERISAKEALKHEYFKS 318 (335)
T ss_pred HHcCCCchhccCHHHHhcCcccCC
Confidence 999999999999999999999975
No 124
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=4.6e-37 Score=323.19 Aligned_cols=279 Identities=30% Similarity=0.484 Sum_probs=220.1
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCe
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 490 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~---~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~ 490 (722)
++|++.+.||+|+||.||+|.+..+++.||+|+++.. ......+.+|+++++.+. |+||+++++++...+.
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~ 74 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLR------HENIVNLKEAFRRKGR 74 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcC------CCCeeehhheEEECCE
Confidence 4799999999999999999999999999999988653 233456778888888885 6799999999999999
Q ss_pred EEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCc
Q 004954 491 LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (722)
Q Consensus 491 l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 570 (722)
.++||||++++++..+..... .+++..++.++.||+.||.|||+.+++|+||+|+||+++. ++.++|+|||++
T Consensus 75 ~~iv~e~~~~~~l~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~--~~~~kl~d~g~~ 147 (288)
T cd07833 75 LYLVFEYVERTLLELLEASPG-----GLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSE--SGVLKLCDFGFA 147 (288)
T ss_pred EEEEEecCCCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECC--CCCEEEEeeecc
Confidence 999999999887776543321 2889999999999999999999999999999999999996 888999999998
Q ss_pred ccccCCc----cccccCCcccCchhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHh
Q 004954 571 CFQTDNL----CLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLM 645 (722)
Q Consensus 571 ~~~~~~~----~~~~gt~~y~APE~l~~~-~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~ 645 (722)
....... ....++..|+|||++.+. .++.++||||||+++|+|++|++||.+....+.+..+...++..+..+..
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (288)
T cd07833 148 RALRARPASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQE 227 (288)
T ss_pred cccCCCccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhh
Confidence 7654332 235678889999999888 78999999999999999999999999887777777777777776665433
Q ss_pred hhhhhhhhhcccccchhhhhccccccccCCccchhhhh-cccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCC
Q 004954 646 QGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHH-LQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 718 (722)
Q Consensus 646 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~-~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf 718 (722)
.......+.. ..... .......... ....+..+.+||++||..+|++|||++++++||||
T Consensus 228 ~~~~~~~~~~------------~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~f 288 (288)
T cd07833 228 LFSSNPRFAG------------VAFPE-PSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF 288 (288)
T ss_pred hcccCccccc------------cccCC-CCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence 2211100000 00000 0000111111 12236779999999999999999999999999998
No 125
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=2.5e-37 Score=326.15 Aligned_cols=249 Identities=24% Similarity=0.295 Sum_probs=193.8
Q ss_pred eccCCCCceEEEEECCCCcEEEEEEeecchh----hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEEEc
Q 004954 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD----FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCEL 497 (722)
Q Consensus 422 LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~----~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~iVmEy 497 (722)
||+|+||+||++.+..+++.+|+|++..... ....+..|+++++.++ |+||+++++++....+.++||||
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~------~~~i~~~~~~~~~~~~~~lv~e~ 74 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVH------SRFIVSLAYAFQTKTDLCLVMTI 74 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCC------CCcEeeeeEEEcCCCeEEEEEeC
Confidence 7999999999999999999999999875321 2244567888888775 67999999999999999999999
Q ss_pred cccc-hHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCcccccCC
Q 004954 498 LRAN-LYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDN 576 (722)
Q Consensus 498 ~~gs-Ll~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~~~ 576 (722)
+.++ |...+.... .....+++..+..++.||+.||.|||+.||+||||||+||+++. ++.++|+|||++......
T Consensus 75 ~~~g~L~~~~~~~~--~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~--~~~~~l~dfg~~~~~~~~ 150 (280)
T cd05608 75 MNGGDLRYHIYNVD--EENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDN--DGNVRISDLGLAVELKDG 150 (280)
T ss_pred CCCCCHHHHHHhcc--ccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC--CCCEEEeeCccceecCCC
Confidence 9864 544443211 12234899999999999999999999999999999999999985 778999999998654332
Q ss_pred ---ccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhhhh
Q 004954 577 ---LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKY 653 (722)
Q Consensus 577 ---~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~~~~~~ 653 (722)
.....+|+.|+|||++.+..++.++|||||||++|+|++|+.||...........+.....
T Consensus 151 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~---------------- 214 (280)
T cd05608 151 QSKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRIL---------------- 214 (280)
T ss_pred CccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhc----------------
Confidence 2234689999999999999999999999999999999999999976432111111110000
Q ss_pred hcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCc-----CHHHHHhCCCCCC
Q 004954 654 FTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRP-----TAREALDHPWLQH 720 (722)
Q Consensus 654 ~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRp-----Ta~ElL~HPwf~~ 720 (722)
.....+| ...+..+.+||.+||+.||++|| |++++++||||+.
T Consensus 215 ---------------~~~~~~~---------~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~ 262 (280)
T cd05608 215 ---------------NDSVTYP---------DKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRD 262 (280)
T ss_pred ---------------ccCCCCc---------ccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhc
Confidence 0000011 12346688999999999999999 8999999999975
No 126
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=2.9e-37 Score=334.33 Aligned_cols=280 Identities=33% Similarity=0.576 Sum_probs=217.3
Q ss_pred ecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec-
Q 004954 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL- 488 (722)
Q Consensus 412 l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~--~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~- 488 (722)
++++|++.+.||+|+||.||+|.+..+|+.||+|++... ........+|+.+++.++ |+||+++++++...
T Consensus 3 ~~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~------h~niv~~~~~~~~~~ 76 (336)
T cd07849 3 VGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFK------HENIIGILDIIRPPS 76 (336)
T ss_pred cccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCC------CCCcCchhheeeccc
Confidence 457899999999999999999999999999999998642 233455677888888775 67999999887644
Q ss_pred ----CeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEE
Q 004954 489 ----EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKI 564 (722)
Q Consensus 489 ----~~l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL 564 (722)
.+.++||||+.+++...+... .+++..++.++.||+.||.|||+.||+||||||+||+++. ++.++|
T Consensus 77 ~~~~~~~~lv~e~~~~~l~~~~~~~-------~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~--~~~~kl 147 (336)
T cd07849 77 FESFNDVYIVQELMETDLYKLIKTQ-------HLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT--NCDLKI 147 (336)
T ss_pred ccccceEEEEehhcccCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECC--CCCEEE
Confidence 368999999998877666421 2889999999999999999999999999999999999986 788999
Q ss_pred EecCCcccccCCc------cccccCCcccCchhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcC
Q 004954 565 IDLGSSCFQTDNL------CLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLG 637 (722)
Q Consensus 565 ~DFGls~~~~~~~------~~~~gt~~y~APE~l~~-~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg 637 (722)
+|||++....... ....+++.|+|||.+.+ ..++.++|||||||++|+|++|+.||.+.+....+..+...++
T Consensus 148 ~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~ 227 (336)
T cd07849 148 CDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLG 227 (336)
T ss_pred CcccceeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcC
Confidence 9999986543221 22467889999998765 4688999999999999999999999998888888888888888
Q ss_pred CCcHHHHhhhhhhh--hhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhC
Q 004954 638 PIDLEMLMQGQEIY--KYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 715 (722)
Q Consensus 638 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~H 715 (722)
.++.+.+....... .++. ... ......+.......+..+.+||.+||+.+|.+|||+.|+++|
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~-------------~~~--~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 228 TPSQEDLNCIISLRARNYIK-------------SLP--FKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred CCCHHHHHHhhchhhhhHHh-------------hcC--cCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 76665543221100 0000 000 000011111122235678999999999999999999999999
Q ss_pred CCCCCC
Q 004954 716 PWLQHP 721 (722)
Q Consensus 716 Pwf~~~ 721 (722)
|||..-
T Consensus 293 p~~~~~ 298 (336)
T cd07849 293 PYLEQY 298 (336)
T ss_pred cccccc
Confidence 999753
No 127
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=3.4e-37 Score=351.60 Aligned_cols=256 Identities=24% Similarity=0.322 Sum_probs=205.1
Q ss_pred eecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 004954 411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 487 (722)
Q Consensus 411 ~l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~---~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~ 487 (722)
...++|++.+.||+|+||+||++++..+|+.||||++.... .......+|+.++..+ .|+||++++..+..
T Consensus 29 ~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~------~h~~iv~~~~~~~~ 102 (496)
T PTZ00283 29 EQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNC------DFFSIVKCHEDFAK 102 (496)
T ss_pred ccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcC------CCCcEEEeecceec
Confidence 34579999999999999999999999999999999986532 2334455666666554 47899999888764
Q ss_pred cC--------eEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccC
Q 004954 488 LE--------HLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQ 558 (722)
Q Consensus 488 ~~--------~l~iVmEy~~-gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~ 558 (722)
.+ .+++||||+. |+|.+.+..... ....+++..+..++.|++.||.|||+.+|+||||||+|||++.
T Consensus 103 ~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~--~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~-- 178 (496)
T PTZ00283 103 KDPRNPENVLMIALVLDYANAGDLRQEIKSRAK--TNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCS-- 178 (496)
T ss_pred ccccCcccceEEEEEEeCCCCCcHHHHHHHhhc--cCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeC--
Confidence 32 3789999998 577777654332 2234899999999999999999999999999999999999986
Q ss_pred CCeEEEEecCCcccccCC-----ccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHH
Q 004954 559 RCEIKIIDLGSSCFQTDN-----LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARII 633 (722)
Q Consensus 559 ~~~vkL~DFGls~~~~~~-----~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~ 633 (722)
++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+.+..+.
T Consensus 179 ~~~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~ 258 (496)
T PTZ00283 179 NGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTL 258 (496)
T ss_pred CCCEEEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHh
Confidence 788999999998754322 234578999999999999999999999999999999999999998877666554443
Q ss_pred hhcCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHH
Q 004954 634 GMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREAL 713 (722)
Q Consensus 634 ~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL 713 (722)
.... ..+| ...++.+.+||.+||+.||.+||++.++|
T Consensus 259 ~~~~----------------------------------~~~~---------~~~~~~l~~li~~~L~~dP~~RPs~~ell 295 (496)
T PTZ00283 259 AGRY----------------------------------DPLP---------PSISPEMQEIVTALLSSDPKRRPSSSKLL 295 (496)
T ss_pred cCCC----------------------------------CCCC---------CCCCHHHHHHHHHHcccChhhCcCHHHHH
Confidence 1100 0011 12346789999999999999999999999
Q ss_pred hCCCCC
Q 004954 714 DHPWLQ 719 (722)
Q Consensus 714 ~HPwf~ 719 (722)
+|||++
T Consensus 296 ~~p~~~ 301 (496)
T PTZ00283 296 NMPICK 301 (496)
T ss_pred hCHHHH
Confidence 999975
No 128
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=7e-38 Score=336.62 Aligned_cols=243 Identities=29% Similarity=0.408 Sum_probs=198.3
Q ss_pred EEeccCCCCceEEEEE---CCCCcEEEEEEeecchh---hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEE
Q 004954 420 EYLGSAAFSKVFQAQD---LHTGVDVCLKIIKNDKD---FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFI 493 (722)
Q Consensus 420 ~~LG~G~fG~Vy~a~d---~~tg~~vAvKil~~~~~---~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~i 493 (722)
+.||+|+||.||++++ ..+|+.+|+|++..... ......+|+++++.++ ||||+++++++...+.+++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~------h~niv~~~~~~~~~~~~~l 75 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVN------HPFIVKLHYAFQTEGKLYL 75 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCC------CCCcccEEEEEEcCCEEEE
Confidence 5799999999999986 35789999999976432 2234556777777664 7899999999999999999
Q ss_pred EEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCccc
Q 004954 494 VCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF 572 (722)
Q Consensus 494 VmEy~~-gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~ 572 (722)
||||+. ++|.+.+... ..+++..++.++.||+.||+|||++||+||||||+|||++. ++.+||+|||++..
T Consensus 76 v~e~~~~~~L~~~l~~~------~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~--~~~~kL~Dfg~~~~ 147 (318)
T cd05582 76 ILDFLRGGDLFTRLSKE------VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDE--EGHIKLTDFGLSKE 147 (318)
T ss_pred EEcCCCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECC--CCcEEEeeccCCcc
Confidence 999997 4666665432 23889999999999999999999999999999999999985 78899999999876
Q ss_pred ccCC---ccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhh
Q 004954 573 QTDN---LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQE 649 (722)
Q Consensus 573 ~~~~---~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~~ 649 (722)
.... .....|++.|+|||++.+..++.++|||||||++|+|++|+.||...+..+.+..+.....
T Consensus 148 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~~------------ 215 (318)
T cd05582 148 SIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKL------------ 215 (318)
T ss_pred cCCCCCceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCCC------------
Confidence 4333 2335789999999999998899999999999999999999999988776665555432110
Q ss_pred hhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcC-----HHHHHhCCCCCC
Q 004954 650 IYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPT-----AREALDHPWLQH 720 (722)
Q Consensus 650 ~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpT-----a~ElL~HPwf~~ 720 (722)
.+| ...+..+.+||++||+.||++||+ +.++++||||+.
T Consensus 216 -----------------------~~p---------~~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~ 259 (318)
T cd05582 216 -----------------------GMP---------QFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFST 259 (318)
T ss_pred -----------------------CCC---------CCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCC
Confidence 111 123456889999999999999999 788999999975
No 129
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=7.4e-37 Score=323.74 Aligned_cols=249 Identities=28% Similarity=0.474 Sum_probs=208.6
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~----~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (722)
++|++.+.||+|+||.||++.+..+++.+|+|+++... ...+.+.+|+++++.+. ||||+++++++....
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~ 74 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIR------HPFLVNLYGSFQDDS 74 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC------CCCccceeeEEEcCC
Confidence 47999999999999999999999999999999987532 23455667888887774 789999999999999
Q ss_pred eEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecC
Q 004954 490 HLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (722)
Q Consensus 490 ~l~iVmEy~~-gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFG 568 (722)
..++||||+. ++|.+.+.... .+++..+..++.||+.||.|||+.||+|+||+|+||+++. ++.+||+|||
T Consensus 75 ~~~~v~e~~~~~~L~~~~~~~~------~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~--~~~~kl~dfg 146 (290)
T cd05580 75 NLYLVMEYVPGGELFSHLRKSG------RFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDS--DGYIKITDFG 146 (290)
T ss_pred eEEEEEecCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECC--CCCEEEeeCC
Confidence 9999999995 67777765432 3889999999999999999999999999999999999986 7889999999
Q ss_pred CcccccCCccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhh
Q 004954 569 SSCFQTDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQ 648 (722)
Q Consensus 569 ls~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~ 648 (722)
++...........+++.|+|||.+.+..++.++||||||+++|+|++|..||...+.......+....
T Consensus 147 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~------------ 214 (290)
T cd05580 147 FAKRVKGRTYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGK------------ 214 (290)
T ss_pred CccccCCCCCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC------------
Confidence 99876666555678999999999998888999999999999999999999998776544444433110
Q ss_pred hhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCc-----CHHHHHhCCCCCC
Q 004954 649 EIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRP-----TAREALDHPWLQH 720 (722)
Q Consensus 649 ~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRp-----Ta~ElL~HPwf~~ 720 (722)
..+|. ..+..+.++|++||+.||.+|+ +++|+++||||+.
T Consensus 215 -----------------------~~~~~---------~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~ 259 (290)
T cd05580 215 -----------------------VRFPS---------FFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAG 259 (290)
T ss_pred -----------------------ccCCc---------cCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCccccc
Confidence 01111 1246688999999999999999 9999999999964
No 130
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1e-37 Score=340.09 Aligned_cols=243 Identities=24% Similarity=0.363 Sum_probs=205.8
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEE
Q 004954 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIV 494 (722)
Q Consensus 415 rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~iV 494 (722)
.+++++.||+|-||.||+|.+.. ...||+|.++......+.+.+|+++|+.|+ |++||++++++...+.++||
T Consensus 207 ~l~l~~~LG~G~FG~V~~g~~~~-~~~vavk~ik~~~m~~~~f~~Ea~iMk~L~------H~~lV~l~gV~~~~~piyIV 279 (468)
T KOG0197|consen 207 ELKLIRELGSGQFGEVWLGKWNG-STKVAVKTIKEGSMSPEAFLREAQIMKKLR------HEKLVKLYGVCTKQEPIYIV 279 (468)
T ss_pred HHHHHHHhcCCccceEEEEEEcC-CCcccceEEeccccChhHHHHHHHHHHhCc------ccCeEEEEEEEecCCceEEE
Confidence 35566789999999999999743 347999999887666678889999999997 56899999999998899999
Q ss_pred EEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCcccc
Q 004954 495 CELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQ 573 (722)
Q Consensus 495 mEy~~-gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~ 573 (722)
||||. |+|+++++... ...+...+++.++.|||+||+||+++++|||||..+||||+. +..+||+|||+|+..
T Consensus 280 tE~m~~GsLl~yLr~~~----~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~--~~~vKIsDFGLAr~~ 353 (468)
T KOG0197|consen 280 TEYMPKGSLLDYLRTRE----GGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDE--DLVVKISDFGLARLI 353 (468)
T ss_pred EEecccCcHHHHhhhcC----CCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeecc--CceEEEccccccccc
Confidence 99997 78999998622 234899999999999999999999999999999999999996 789999999999965
Q ss_pred cCCccc-c---ccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhh
Q 004954 574 TDNLCL-Y---VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQ 648 (722)
Q Consensus 574 ~~~~~~-~---~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~ 648 (722)
.+.... . .-+..|.|||.+....++.++|||||||+||||+| |+.||++.+..+.+..+.+...
T Consensus 354 ~d~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyR----------- 422 (468)
T KOG0197|consen 354 GDDEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYR----------- 422 (468)
T ss_pred CCCceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCc-----------
Confidence 544332 1 22566999999999999999999999999999999 9999999999998888753211
Q ss_pred hhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHH
Q 004954 649 EIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREAL 713 (722)
Q Consensus 649 ~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL 713 (722)
+| .+...++++.++|..||..+|++|||.+.+.
T Consensus 423 -------------------------lp-------~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~ 455 (468)
T KOG0197|consen 423 -------------------------LP-------RPEGCPDEVYELMKSCWHEDPEDRPTFETLR 455 (468)
T ss_pred -------------------------CC-------CCCCCCHHHHHHHHHHhhCCcccCCCHHHHH
Confidence 11 1234567789999999999999999988665
No 131
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=7e-38 Score=338.39 Aligned_cols=245 Identities=25% Similarity=0.370 Sum_probs=193.9
Q ss_pred eccCCCCceEEEEECCCCcEEEEEEeecchh----hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEEEc
Q 004954 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD----FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCEL 497 (722)
Q Consensus 422 LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~----~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~iVmEy 497 (722)
||+|+||+||+|++..+++.||+|++..... .......|..++..+.. ..||||+++++.+....+.++||||
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~---~~~p~i~~~~~~~~~~~~~~lv~e~ 77 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLL---DESPFIVGLKFSFQTDSDLYLVTDY 77 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhcc---CCCCcCcceEEEEecCCeEEEEEcC
Confidence 7999999999999999999999999865321 12233445555554431 2589999999999999999999999
Q ss_pred ccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCcccccC-
Q 004954 498 LRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTD- 575 (722)
Q Consensus 498 ~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~~- 575 (722)
+.+ +|...+.... .+++..++.++.||+.||+|||++||+||||||+|||++. ++.++|+|||++.....
T Consensus 78 ~~~g~L~~~l~~~~------~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~--~~~~kl~Dfg~a~~~~~~ 149 (330)
T cd05586 78 MSGGELFWHLQKEG------RFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDA--TGHIALCDFGLSKANLTD 149 (330)
T ss_pred CCCChHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECC--CCCEEEecCCcCcCCCCC
Confidence 975 5665554322 2889999999999999999999999999999999999986 77899999999865322
Q ss_pred --CccccccCCcccCchhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhhh
Q 004954 576 --NLCLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYK 652 (722)
Q Consensus 576 --~~~~~~gt~~y~APE~l~~~-~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~~~~~ 652 (722)
.....+||+.|+|||++.+. .++.++|||||||++|+|++|..||.+.+..+.+..+....
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~---------------- 213 (330)
T cd05586 150 NKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGK---------------- 213 (330)
T ss_pred CCCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCC----------------
Confidence 22345789999999999765 48899999999999999999999998876665554443110
Q ss_pred hhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCc----CHHHHHhCCCCCC
Q 004954 653 YFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRP----TAREALDHPWLQH 720 (722)
Q Consensus 653 ~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRp----Ta~ElL~HPwf~~ 720 (722)
..+|. ...+..+.+||++||+.||.+|| ++.++++||||..
T Consensus 214 -------------------~~~~~--------~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~ 258 (330)
T cd05586 214 -------------------VRFPK--------NVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFAD 258 (330)
T ss_pred -------------------CCCCC--------ccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccC
Confidence 01111 01245688999999999999998 7999999999974
No 132
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.9e-37 Score=352.75 Aligned_cols=291 Identities=22% Similarity=0.273 Sum_probs=205.7
Q ss_pred CceecCcEEEEEEeccCCCCceEEEEECCC-CcEEEE------------------EEeecchhhhHhHHHHHHHHHHhcc
Q 004954 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHT-GVDVCL------------------KIIKNDKDFFDQSLDEIKLLKLVNK 469 (722)
Q Consensus 409 ~~~l~~rY~i~~~LG~G~fG~Vy~a~d~~t-g~~vAv------------------Kil~~~~~~~~~~~~E~~il~~L~~ 469 (722)
++.+.++|++++.||+|+||+||++..+.. +...++ |.+.........+.+|+.+++.++
T Consensus 143 ~~~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~- 221 (501)
T PHA03210 143 DDEFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLN- 221 (501)
T ss_pred chhhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCC-
Confidence 445668999999999999999999875432 222222 222222333455678888888875
Q ss_pred cCCCCCCceeEEEEEEEecCeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCC
Q 004954 470 NDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKP 549 (722)
Q Consensus 470 ~~~~~hpnIv~l~~~f~~~~~l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp 549 (722)
|+||+++++++...+..++||+++.+++++++....... .....+..++.|+.||+.||.|||++||+||||||
T Consensus 222 -----HpnIv~l~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~-~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP 295 (501)
T PHA03210 222 -----HENILKIEEILRSEANTYMITQKYDFDLYSFMYDEAFDW-KDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKL 295 (501)
T ss_pred -----CCCcCcEeEEEEECCeeEEEEeccccCHHHHHhhccccc-cccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCH
Confidence 789999999999999999999999988888765432211 11244677888999999999999999999999999
Q ss_pred CceEEcccCCCeEEEEecCCcccccCCc----cccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCC-CCC--
Q 004954 550 ENILIKSYQRCEIKIIDLGSSCFQTDNL----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVL-FPN-- 622 (722)
Q Consensus 550 ~NILl~~~~~~~vkL~DFGls~~~~~~~----~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~P-F~~-- 622 (722)
+|||++. ++.+||+|||++....... ....||+.|+|||++.+..++.++|||||||++|||++|..+ |..
T Consensus 296 ~NILl~~--~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~ 373 (501)
T PHA03210 296 ENIFLNC--DGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGG 373 (501)
T ss_pred HHEEECC--CCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCC
Confidence 9999986 7889999999997654322 235789999999999999999999999999999999998764 432
Q ss_pred ChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccC
Q 004954 623 DAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEIN 702 (722)
Q Consensus 623 ~~~~e~l~~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~d 702 (722)
......+.+++..++..+.+.......+.+++.... .......++ .+-.. ...+..+.++|.+||++|
T Consensus 374 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~--------~~~~~~~~~---~~~~~-~~~~~~~~~li~kmL~~D 441 (501)
T PHA03210 374 GKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAE--------IDHAGHSVP---PLIRN-LGLPADFEYPLVKMLTFD 441 (501)
T ss_pred CCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhh--------cccCccchh---hHHHh-cCCChHHHHHHHHHhccC
Confidence 234455555555554333222111111222221100 000000011 01111 123456889999999999
Q ss_pred CCCCcCHHHHHhCCCCCC
Q 004954 703 PQRRPTAREALDHPWLQH 720 (722)
Q Consensus 703 P~kRpTa~ElL~HPwf~~ 720 (722)
|.+|||+.|+|+||||+.
T Consensus 442 P~~Rpsa~elL~hp~f~~ 459 (501)
T PHA03210 442 WHLRPGAAELLALPLFSA 459 (501)
T ss_pred cccCcCHHHHhhChhhhc
Confidence 999999999999999975
No 133
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=5.3e-37 Score=332.13 Aligned_cols=255 Identities=20% Similarity=0.315 Sum_probs=199.9
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~----~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (722)
++|++.++||+|+||+||+++++.+++.+|+|++.+.. .....+.+|..++..+ .|++|+++++.+...+
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~------~~~~i~~~~~~~~~~~ 74 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNG------DNQWITTLHYAFQDEN 74 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhC------CCCCEeeEEEEEecCC
Confidence 47999999999999999999999999999999986532 1122344555555544 4789999999999999
Q ss_pred eEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecC
Q 004954 490 HLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (722)
Q Consensus 490 ~l~iVmEy~~-gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFG 568 (722)
++++||||+. |+|.+++..... .+++..++.++.||+.||.|||+.||+||||||+|||++. ++.+||+|||
T Consensus 75 ~~~lv~ey~~~g~L~~~l~~~~~-----~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~--~~~~kL~DfG 147 (332)
T cd05623 75 NLYLVMDYYVGGDLLTLLSKFED-----RLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDM--NGHIRLADFG 147 (332)
T ss_pred EEEEEEeccCCCcHHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECC--CCCEEEeecc
Confidence 9999999997 567777654221 2889999999999999999999999999999999999985 7889999999
Q ss_pred CcccccCC----ccccccCCcccCchhhc-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCC
Q 004954 569 SSCFQTDN----LCLYVQSRSYRAPEVII-----GLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPI 639 (722)
Q Consensus 569 ls~~~~~~----~~~~~gt~~y~APE~l~-----~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~ 639 (722)
++...... .....||+.|+|||++. ...++.++|||||||++|+|++|+.||...+..+.+..+.....
T Consensus 148 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~-- 225 (332)
T cd05623 148 SCLKLMEDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKE-- 225 (332)
T ss_pred hheecccCCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCc--
Confidence 98653221 12357899999999986 34578899999999999999999999988777666655542110
Q ss_pred cHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCC--CcCHHHHHhCCC
Q 004954 640 DLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQR--RPTAREALDHPW 717 (722)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~k--RpTa~ElL~HPw 717 (722)
...+|. .....+..+.+||++||..++.+ |+++.++++|||
T Consensus 226 -------------------------------~~~~p~------~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~ 268 (332)
T cd05623 226 -------------------------------RFQFPA------QVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQHPF 268 (332)
T ss_pred -------------------------------cccCCC------ccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCCCC
Confidence 001111 11123467889999999765554 689999999999
Q ss_pred CCC
Q 004954 718 LQH 720 (722)
Q Consensus 718 f~~ 720 (722)
|+.
T Consensus 269 f~~ 271 (332)
T cd05623 269 FTG 271 (332)
T ss_pred cCC
Confidence 975
No 134
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=8.4e-37 Score=321.07 Aligned_cols=276 Identities=29% Similarity=0.463 Sum_probs=218.2
Q ss_pred EEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEE
Q 004954 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF 492 (722)
Q Consensus 416 Y~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~---~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~ 492 (722)
|++.+.||.|++|.||+|.++.+|+.||+|++.... .....+.+|+.+++.++ |+||+++++++...+..+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~------~~~iv~~~~~~~~~~~~~ 74 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELN------HPNIVRLLDVVHSENKLY 74 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcC------CCCccCHhheeccCCeEE
Confidence 678899999999999999999999999999987543 22245677888888775 689999999999999999
Q ss_pred EEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCccc
Q 004954 493 IVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF 572 (722)
Q Consensus 493 iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~ 572 (722)
+||||++++|.+++..... ..+++..++.++.|++.||.|||+.+++|+||+|+||+++. ++.++|+|||++..
T Consensus 75 iv~e~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~--~~~~~l~df~~~~~ 148 (283)
T cd07835 75 LVFEFLDLDLKKYMDSSPL----TGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDR--EGALKLADFGLARA 148 (283)
T ss_pred EEEeccCcCHHHHHhhCCC----CCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcC--CCcEEEeecccccc
Confidence 9999998888887764332 23889999999999999999999999999999999999996 78899999999865
Q ss_pred ccCCc---cccccCCcccCchhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhh
Q 004954 573 QTDNL---CLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQ 648 (722)
Q Consensus 573 ~~~~~---~~~~gt~~y~APE~l~~~-~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~ 648 (722)
..... ....+++.|+|||++.+. .++.++||||||+++|+|++|++||...+....+.++....+.+....+....
T Consensus 149 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (283)
T cd07835 149 FGVPVRTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVT 228 (283)
T ss_pred cCCCccccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhh
Confidence 43221 223457889999988764 57889999999999999999999999888777777777777776666554443
Q ss_pred hhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCC
Q 004954 649 EIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 718 (722)
Q Consensus 649 ~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf 718 (722)
....+...-.. .. ...........+..+.++|.+||+.||.+|||+.|+++||||
T Consensus 229 ~~~~~~~~~~~------------~~---~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~ 283 (283)
T cd07835 229 SLPDYKPTFPK------------WA---RQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF 283 (283)
T ss_pred hchhhhhhccc------------cc---ccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence 33322110000 00 001111122345678999999999999999999999999998
No 135
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=1.9e-37 Score=334.52 Aligned_cols=243 Identities=27% Similarity=0.404 Sum_probs=193.2
Q ss_pred EEeccCCCCceEEEEECCCCcEEEEEEeecchh----hhHhHHHHHHH-HHHhcccCCCCCCceeEEEEEEEecCeEEEE
Q 004954 420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD----FFDQSLDEIKL-LKLVNKNDPADEHHILRLYDYFYHLEHLFIV 494 (722)
Q Consensus 420 ~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~----~~~~~~~E~~i-l~~L~~~~~~~hpnIv~l~~~f~~~~~l~iV 494 (722)
+.||+|+||+||++++..+|+.+|+|++..... ....+..|..+ ++. ..||||+++++++...+..++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~------~~hp~iv~~~~~~~~~~~~~lv 74 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKN------VKHPFLVGLHYSFQTTEKLYFV 74 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHh------CCCCCCccEEEEEecCCEEEEE
Confidence 369999999999999999999999999975421 22233334332 222 3589999999999999999999
Q ss_pred EEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCcccc
Q 004954 495 CELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQ 573 (722)
Q Consensus 495 mEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~ 573 (722)
|||+.+ +|...+... ..+++..++.++.||+.||.|||+.||+||||||+|||++. ++.+||+|||++...
T Consensus 75 ~e~~~~~~L~~~l~~~------~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~--~~~~kL~DfG~~~~~ 146 (325)
T cd05604 75 LDFVNGGELFFHLQRE------RSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDS--QGHVVLTDFGLCKEG 146 (325)
T ss_pred EcCCCCCCHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECC--CCCEEEeecCCcccC
Confidence 999986 455544322 23889999999999999999999999999999999999986 788999999998643
Q ss_pred c---CCccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhh
Q 004954 574 T---DNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEI 650 (722)
Q Consensus 574 ~---~~~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~~~ 650 (722)
. .......||+.|+|||++.+..++.++|||||||++|+|++|..||...+..+....+...
T Consensus 147 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~--------------- 211 (325)
T cd05604 147 IAQSDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHK--------------- 211 (325)
T ss_pred CCCCCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcC---------------
Confidence 2 2233457899999999999999999999999999999999999999887766655444310
Q ss_pred hhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCH----HHHHhCCCCCC
Q 004954 651 YKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTA----REALDHPWLQH 720 (722)
Q Consensus 651 ~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa----~ElL~HPwf~~ 720 (722)
...++ ...+..+.++|++||+.||.+||++ .++++||||+.
T Consensus 212 --------------------~~~~~---------~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~ 256 (325)
T cd05604 212 --------------------PLVLR---------PGASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFES 256 (325)
T ss_pred --------------------CccCC---------CCCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCC
Confidence 00001 1123567899999999999999976 59999999975
No 136
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=5.9e-37 Score=331.21 Aligned_cols=245 Identities=22% Similarity=0.349 Sum_probs=194.2
Q ss_pred EEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEE
Q 004954 420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVC 495 (722)
Q Consensus 420 ~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~----~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~iVm 495 (722)
+.||+|+||+||++++..+++.+|+|+++... .....+.+|..++..+. .||+|+++++++...+.+++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~-----~~~~i~~~~~~~~~~~~~~lv~ 75 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQAS-----SNPFLVGLHSCFQTTSRLFLVI 75 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhc-----CCCCEeeEEEEEEeCCEEEEEE
Confidence 36999999999999999999999999998642 23345667777777764 3789999999999999999999
Q ss_pred Ecccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCccccc
Q 004954 496 ELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT 574 (722)
Q Consensus 496 Ey~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~ 574 (722)
||+.+ +|...+.... .+++..++.++.||+.||+|||++||+||||||+|||++. ++.+||+|||++....
T Consensus 76 e~~~~~~L~~~~~~~~------~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~--~~~~kl~Dfg~~~~~~ 147 (327)
T cd05617 76 EYVNGGDLMFHMQRQR------KLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDA--DGHIKLTDYGMCKEGL 147 (327)
T ss_pred eCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeC--CCCEEEeccccceecc
Confidence 99975 5555544321 2899999999999999999999999999999999999986 7889999999986422
Q ss_pred ---CCccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCh------HHHHHHHHHhhcCCCcHHHHh
Q 004954 575 ---DNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDA------VVMILARIIGMLGPIDLEMLM 645 (722)
Q Consensus 575 ---~~~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~------~~e~l~~i~~~lg~~~~~~~~ 645 (722)
......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.... ..+.+.+++.
T Consensus 148 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~----------- 216 (327)
T cd05617 148 GPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVIL----------- 216 (327)
T ss_pred CCCCceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHH-----------
Confidence 22334678999999999999999999999999999999999999995321 1111111100
Q ss_pred hhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcC------HHHHHhCCCCC
Q 004954 646 QGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPT------AREALDHPWLQ 719 (722)
Q Consensus 646 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpT------a~ElL~HPwf~ 719 (722)
.....+| ...+..+.++|++||+.||.+|++ ..++++||||+
T Consensus 217 -----------------------~~~~~~p---------~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~ 264 (327)
T cd05617 217 -----------------------EKPIRIP---------RFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFR 264 (327)
T ss_pred -----------------------hCCCCCC---------CCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCC
Confidence 0001111 123456889999999999999998 57999999997
Q ss_pred C
Q 004954 720 H 720 (722)
Q Consensus 720 ~ 720 (722)
.
T Consensus 265 ~ 265 (327)
T cd05617 265 S 265 (327)
T ss_pred C
Confidence 5
No 137
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=9.8e-37 Score=319.83 Aligned_cols=276 Identities=29% Similarity=0.489 Sum_probs=218.7
Q ss_pred EEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec--Ce
Q 004954 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL--EH 490 (722)
Q Consensus 416 Y~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~---~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~--~~ 490 (722)
|++.+.||+|++|.||+|.+..+++.+|+|++.... .....+.+|+.+++.+. |+||+++++++... ..
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~~ 74 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLR------HPNIVRLKEIVTSKGKGS 74 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhcc------CCCeeeheeeEecCCCCc
Confidence 678999999999999999999999999999998652 23345677888888875 67999999999988 89
Q ss_pred EEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCc
Q 004954 491 LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (722)
Q Consensus 491 l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 570 (722)
.++||||+++++.+++.... ..+++..++.++.||+.||+|||+.|++|+||+|+||+++. ++.++|+|||++
T Consensus 75 ~~lv~e~~~~~l~~~~~~~~-----~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~--~~~~~l~d~g~~ 147 (287)
T cd07840 75 IYMVFEYMDHDLTGLLDSPE-----VKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINN--DGVLKLADFGLA 147 (287)
T ss_pred EEEEeccccccHHHHHhccC-----CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcC--CCCEEEccccce
Confidence 99999999988877775432 23899999999999999999999999999999999999996 788999999998
Q ss_pred ccccCCc----cccccCCcccCchhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHh
Q 004954 571 CFQTDNL----CLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLM 645 (722)
Q Consensus 571 ~~~~~~~----~~~~gt~~y~APE~l~~-~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~ 645 (722)
....... ....++..|+|||.+.+ ..++.++||||||+++|+|++|+.||...+....+..+....+.++...+.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (287)
T cd07840 148 RPYTKRNSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWP 227 (287)
T ss_pred eeccCCCcccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhcc
Confidence 7655432 23456788999998765 457899999999999999999999999988888888888777776665554
Q ss_pred hhhhhhhhhcccccchhhhhccccccccCCccchhhhhccc-CcHHHHHHHHHhcccCCCCCcCHHHHHhCCCC
Q 004954 646 QGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQF-SDAFFIDFVRTLLEINPQRRPTAREALDHPWL 718 (722)
Q Consensus 646 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~-~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf 718 (722)
.......+ .......+....+...... .+..+.++|++||+.+|.+||++.++++||||
T Consensus 228 ~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~ 287 (287)
T cd07840 228 GVSKLPWF--------------ENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF 287 (287)
T ss_pred ccccchhh--------------hhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence 33222100 0000001111112222222 26778999999999999999999999999997
No 138
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=5.7e-37 Score=331.90 Aligned_cols=255 Identities=20% Similarity=0.298 Sum_probs=200.7
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~----~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (722)
++|++.+.||+|+||+||+++++.+++.||+|++.+.. .....+.+|..++..+ .|++|+++++++...+
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~------~~~~i~~l~~~~~~~~ 74 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNG------DCQWITTLHYAFQDEN 74 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhC------CCCCEeeEEEEEEcCC
Confidence 47999999999999999999999999999999987532 1223345566666554 4789999999999999
Q ss_pred eEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecC
Q 004954 490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (722)
Q Consensus 490 ~l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFG 568 (722)
+.++||||+.| +|.+++..... .+++..+..++.|++.||.|||+.||+||||||+|||++. ++.+||+|||
T Consensus 75 ~~~lv~Ey~~gg~L~~~l~~~~~-----~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~--~~~~kl~DfG 147 (331)
T cd05624 75 YLYLVMDYYVGGDLLTLLSKFED-----RLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDM--NGHIRLADFG 147 (331)
T ss_pred EEEEEEeCCCCCcHHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcC--CCCEEEEecc
Confidence 99999999975 67766654221 2889999999999999999999999999999999999985 7889999999
Q ss_pred CcccccCCc----cccccCCcccCchhhcC-----CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCC
Q 004954 569 SSCFQTDNL----CLYVQSRSYRAPEVIIG-----LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPI 639 (722)
Q Consensus 569 ls~~~~~~~----~~~~gt~~y~APE~l~~-----~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~ 639 (722)
++....... ....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||...+..+.+..+......
T Consensus 148 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~- 226 (331)
T cd05624 148 SCLKMNQDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEER- 226 (331)
T ss_pred ceeeccCCCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCc-
Confidence 987654321 22468999999999876 45788999999999999999999999887766655554321100
Q ss_pred cHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCC--CcCHHHHHhCCC
Q 004954 640 DLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQR--RPTAREALDHPW 717 (722)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~k--RpTa~ElL~HPw 717 (722)
..+|.. ....++.+++||.+||+.++++ |++++++++|||
T Consensus 227 --------------------------------~~~p~~------~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~ 268 (331)
T cd05624 227 --------------------------------FQFPSH------ITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAF 268 (331)
T ss_pred --------------------------------ccCCCc------cccCCHHHHHHHHHHccCchhhcCCCCHHHHhcCCC
Confidence 001110 1112466889999999876655 579999999999
Q ss_pred CCC
Q 004954 718 LQH 720 (722)
Q Consensus 718 f~~ 720 (722)
|+.
T Consensus 269 f~~ 271 (331)
T cd05624 269 FEG 271 (331)
T ss_pred cCC
Confidence 975
No 139
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=6.2e-37 Score=324.22 Aligned_cols=254 Identities=26% Similarity=0.342 Sum_probs=199.5
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCe
Q 004954 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 490 (722)
Q Consensus 415 rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~----~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~ 490 (722)
.|++.+.||+|+||+||++.+..+++.+|+|.+.... .......+|+.+++.++ |++|+++++.+...++
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~------~~~i~~~~~~~~~~~~ 74 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVN------SRFVVSLAYAYETKDA 74 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCC------CCCeeeeeEEEecCCE
Confidence 3788999999999999999999999999999986532 12234567888887775 6799999999999999
Q ss_pred EEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCC
Q 004954 491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS 569 (722)
Q Consensus 491 l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGl 569 (722)
.++||||+.+ +|.+.+..... ..+++..+..++.|++.||.|||+.||+||||||+||+++. ++.++|+|||+
T Consensus 75 ~~lv~e~~~g~~L~~~l~~~~~----~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~--~~~~~l~Dfg~ 148 (285)
T cd05630 75 LCLVLTLMNGGDLKFHIYHMGE----AGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDD--HGHIRISDLGL 148 (285)
T ss_pred EEEEEEecCCCcHHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECC--CCCEEEeeccc
Confidence 9999999975 56555543221 23889999999999999999999999999999999999986 77899999999
Q ss_pred cccccCC--ccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 004954 570 SCFQTDN--LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 647 (722)
Q Consensus 570 s~~~~~~--~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~ 647 (722)
+...... .....+++.|+|||++.+..++.++|||||||++|+|++|+.||................
T Consensus 149 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~----------- 217 (285)
T cd05630 149 AVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLV----------- 217 (285)
T ss_pred eeecCCCccccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhh-----------
Confidence 8654332 223578999999999999999999999999999999999999997642211110000000
Q ss_pred hhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcC-----HHHHHhCCCCCC
Q 004954 648 QEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPT-----AREALDHPWLQH 720 (722)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpT-----a~ElL~HPwf~~ 720 (722)
. ...... ....++.+.+||++||+.||++||| ++|+++||||+.
T Consensus 218 -------~-------------~~~~~~---------~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~ 266 (285)
T cd05630 218 -------K-------------EVQEEY---------SEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQ 266 (285)
T ss_pred -------h-------------hhhhhc---------CccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhc
Confidence 0 000000 1123466889999999999999999 999999999974
No 140
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=8.9e-37 Score=346.99 Aligned_cols=254 Identities=24% Similarity=0.290 Sum_probs=205.7
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCC-CcEEEEEEeecch-hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCe
Q 004954 413 AGRYYVTEYLGSAAFSKVFQAQDLHT-GVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 490 (722)
Q Consensus 413 ~~rY~i~~~LG~G~fG~Vy~a~d~~t-g~~vAvKil~~~~-~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~ 490 (722)
...|.+.+.||+|+||.||+|.+..+ ++.||+|.+.... .....+.+|+.+++.++ ||||+++++++...++
T Consensus 66 ~~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~------Hpniv~~~~~~~~~~~ 139 (478)
T PTZ00267 66 EHMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACD------HFGIVKHFDDFKSDDK 139 (478)
T ss_pred ceeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCC------CCCEeEEEEEEEECCE
Confidence 34599999999999999999998777 7889999775433 23345566888777664 7899999999999999
Q ss_pred EEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCC
Q 004954 491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS 569 (722)
Q Consensus 491 l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGl 569 (722)
.+|||||+.+ +|.+.+..... ....+++..+..++.||+.||.|||+.||+||||||+|||++. ++.+||+|||+
T Consensus 140 ~~lv~E~~~gg~L~~~l~~~~~--~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~--~~~~kL~DFgl 215 (478)
T PTZ00267 140 LLLIMEYGSGGDLNKQIKQRLK--EHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMP--TGIIKLGDFGF 215 (478)
T ss_pred EEEEEECCCCCCHHHHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECC--CCcEEEEeCcC
Confidence 9999999975 66666543221 2234889999999999999999999999999999999999996 78899999999
Q ss_pred cccccCC-----ccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHH
Q 004954 570 SCFQTDN-----LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEML 644 (722)
Q Consensus 570 s~~~~~~-----~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~ 644 (722)
+...... ....+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+++..+.....
T Consensus 216 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~------- 288 (478)
T PTZ00267 216 SKQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKY------- 288 (478)
T ss_pred ceecCCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC-------
Confidence 9765433 2335689999999999999999999999999999999999999988776665555431100
Q ss_pred hhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCC
Q 004954 645 MQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQ 719 (722)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~ 719 (722)
..+| ...+..+.+||.+||+.||++||++.++|.|||++
T Consensus 289 ---------------------------~~~~---------~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~~~~~ 327 (478)
T PTZ00267 289 ---------------------------DPFP---------CPVSSGMKALLDPLLSKNPALRPTTQQLLHTEFLK 327 (478)
T ss_pred ---------------------------CCCC---------ccCCHHHHHHHHHHhccChhhCcCHHHHHhCHHHH
Confidence 0001 11235688999999999999999999999999985
No 141
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=4.7e-37 Score=323.46 Aligned_cols=255 Identities=25% Similarity=0.425 Sum_probs=199.3
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~--~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (722)
++|++.++||+|+||.||++.+..+++.+|+|++..+ ......+.+|+.+++.+. ||||+++++.+...+..
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~~~~~~ 74 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCD------SPYIIGFYGAFFVENRI 74 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCC------CCCeeeEEEEEEECCEE
Confidence 3688999999999999999999999999999998754 223345667888777664 78999999999999999
Q ss_pred EEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCcc
Q 004954 492 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 571 (722)
Q Consensus 492 ~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~ 571 (722)
++||||++++.+.... .+++..+..++.|++.||.|||+.||+|+||||+|||++. ++.++|+|||++.
T Consensus 75 ~lv~e~~~~~~l~~~~---------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~--~~~~~l~dfg~~~ 143 (279)
T cd06619 75 SICTEFMDGGSLDVYR---------KIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNT--RGQVKLCDFGVST 143 (279)
T ss_pred EEEEecCCCCChHHhh---------cCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECC--CCCEEEeeCCcce
Confidence 9999999976554331 1678889999999999999999999999999999999986 7889999999987
Q ss_pred cccCC-ccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhh
Q 004954 572 FQTDN-LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEI 650 (722)
Q Consensus 572 ~~~~~-~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~~~ 650 (722)
..... .....+++.|+|||++.+..++.++|+|||||++|+|++|+.||.......... .+...
T Consensus 144 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~--------~~~~~------- 208 (279)
T cd06619 144 QLVNSIAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSL--------MPLQL------- 208 (279)
T ss_pred ecccccccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhccccccc--------chHHH-------
Confidence 65433 334578999999999999899999999999999999999999996522111000 00000
Q ss_pred hhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCCC
Q 004954 651 YKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 720 (722)
Q Consensus 651 ~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~~ 720 (722)
.+.... ......+ ....++.+.+||.+||+.||.+||+++++++||||+.
T Consensus 209 ~~~~~~------------~~~~~~~--------~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~~~ 258 (279)
T cd06619 209 LQCIVD------------EDPPVLP--------VGQFSEKFVHFITQCMRKQPKERPAPENLMDHPFIVQ 258 (279)
T ss_pred HHHHhc------------cCCCCCC--------CCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCccccc
Confidence 000000 0000000 0113467899999999999999999999999999975
No 142
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=9e-37 Score=321.01 Aligned_cols=279 Identities=27% Similarity=0.468 Sum_probs=212.7
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchh---hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCe
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 490 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~---~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~ 490 (722)
++|++.++||+|+||.||+|.+..+++.+|+|++..... ....+.+|+++++.++ ||||+++++++.....
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~ 74 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLR------HENLVNLIEVFRRKKR 74 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcC------CcchhhHHHhcccCCe
Confidence 479999999999999999999998999999998764321 2345667888877775 6899999999999999
Q ss_pred EEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCc
Q 004954 491 LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (722)
Q Consensus 491 l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 570 (722)
.++||||+.++++..+.... ..+++..++.++.||+.||+|||+.|++|+||+|+||+++. ++.++|+|||++
T Consensus 75 ~~lv~e~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~--~~~~~l~dfg~~ 147 (286)
T cd07846 75 LYLVFEFVDHTVLDDLEKYP-----NGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQ--SGVVKLCDFGFA 147 (286)
T ss_pred EEEEEecCCccHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECC--CCcEEEEeeeee
Confidence 99999999987666544322 12889999999999999999999999999999999999986 788999999998
Q ss_pred ccccCC---ccccccCCcccCchhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhh
Q 004954 571 CFQTDN---LCLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQ 646 (722)
Q Consensus 571 ~~~~~~---~~~~~gt~~y~APE~l~~-~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~ 646 (722)
...... .....++..|+|||++.+ ..++.++||||||+++|+|++|++||......+.+..+....+.........
T Consensus 148 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (286)
T cd07846 148 RTLAAPGEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEI 227 (286)
T ss_pred eeccCCccccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHH
Confidence 654332 223457889999999875 3478899999999999999999999998877777777776666544321110
Q ss_pred hhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCC
Q 004954 647 GQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 718 (722)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf 718 (722)
... ...+. .......+............+..+.+||.+||+.+|.+||++.++|+||||
T Consensus 228 ~~~-~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 286 (286)
T cd07846 228 FQK-NPLFA------------GMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF 286 (286)
T ss_pred hcc-chHhh------------ccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence 000 00000 000000111111222233456789999999999999999999999999998
No 143
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=1.4e-36 Score=315.20 Aligned_cols=249 Identities=29% Similarity=0.387 Sum_probs=199.9
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchh------hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD------FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 487 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~------~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~ 487 (722)
+.|++.+.||+|++|.||++.+..+++.+|+|.+..... ....+.+|+.+++.++ ||||+++++++..
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~ 75 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQ------HERIVQYYGCLRD 75 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCC------CCCeeeeEEEEcc
Confidence 468999999999999999999999999999999865321 2234566777777664 7899999999999
Q ss_pred cCeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEe
Q 004954 488 LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIID 566 (722)
Q Consensus 488 ~~~l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~D 566 (722)
.+.+++||||+.+ +|.+.+.... .+++..+..++.|++.||.|||+.||+|+||+|+||+++. ++.++|+|
T Consensus 76 ~~~~~~v~e~~~~~~l~~~~~~~~------~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~--~~~~~l~d 147 (263)
T cd06625 76 DETLSIFMEYMPGGSVKDQLKAYG------ALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDS--AGNVKLGD 147 (263)
T ss_pred CCeEEEEEEECCCCcHHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC--CCCEEEee
Confidence 9999999999975 6666665332 2788999999999999999999999999999999999985 78899999
Q ss_pred cCCcccccCCc------cccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCc
Q 004954 567 LGSSCFQTDNL------CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPID 640 (722)
Q Consensus 567 FGls~~~~~~~------~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~ 640 (722)
||++....... ....++..|+|||++.+..++.++||||||+++|+|++|+.||...+.......+...
T Consensus 148 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~----- 222 (263)
T cd06625 148 FGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQ----- 222 (263)
T ss_pred cccceeccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhcc-----
Confidence 99986543211 2245678899999999988999999999999999999999999765443333222100
Q ss_pred HHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCC
Q 004954 641 LEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 718 (722)
Q Consensus 641 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf 718 (722)
.....+| ...+..+.+||++||..+|.+|||+.++|+||||
T Consensus 223 ----------------------------~~~~~~~---------~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 263 (263)
T cd06625 223 ----------------------------PTNPQLP---------SHVSPDARNFLRRTFVENAKKRPSAEELLRHFFV 263 (263)
T ss_pred ----------------------------CCCCCCC---------ccCCHHHHHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence 0001111 1234668899999999999999999999999998
No 144
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=8.1e-37 Score=331.21 Aligned_cols=280 Identities=31% Similarity=0.537 Sum_probs=218.2
Q ss_pred ecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec
Q 004954 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 488 (722)
Q Consensus 412 l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~---~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~ 488 (722)
+..+|++.+.||+|+||+||++++..+++.||||.+... ........+|+.+++.++ |+||+++++++...
T Consensus 3 ~~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~------h~ni~~~~~~~~~~ 76 (337)
T cd07858 3 VDTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLD------HENVIAIKDIMPPP 76 (337)
T ss_pred cccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcC------CCCccchHHheecc
Confidence 457899999999999999999999999999999988642 222345667888887774 67999999988754
Q ss_pred -----CeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEE
Q 004954 489 -----EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIK 563 (722)
Q Consensus 489 -----~~l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vk 563 (722)
...++||||+.++|.+.+.... .+++..+..++.||+.||.|||+.+++|+||||+||+++. ++.+|
T Consensus 77 ~~~~~~~~~lv~e~~~~~L~~~~~~~~------~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~--~~~~k 148 (337)
T cd07858 77 HREAFNDVYIVYELMDTDLHQIIRSSQ------TLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNA--NCDLK 148 (337)
T ss_pred cccccCcEEEEEeCCCCCHHHHHhcCC------CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcC--CCCEE
Confidence 3589999999988887775332 2899999999999999999999999999999999999986 78899
Q ss_pred EEecCCcccccCC---ccccccCCcccCchhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCC
Q 004954 564 IIDLGSSCFQTDN---LCLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPI 639 (722)
Q Consensus 564 L~DFGls~~~~~~---~~~~~gt~~y~APE~l~~-~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~ 639 (722)
|+|||++...... .....++..|+|||.+.. ..++.++|||||||++|+|++|++||.+.+....+..+....+.+
T Consensus 149 L~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 228 (337)
T cd07858 149 ICDFGLARTTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSP 228 (337)
T ss_pred ECcCccccccCCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCC
Confidence 9999998765432 223467889999999875 468899999999999999999999999888888888888888877
Q ss_pred cHHHHhhhh--hhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCC
Q 004954 640 DLEMLMQGQ--EIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPW 717 (722)
Q Consensus 640 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPw 717 (722)
+.+.+.... ...++.. .... .............+..+.+||++||+.+|++|||+.++|+|||
T Consensus 229 ~~~~~~~~~~~~~~~~~~-------------~~~~--~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~ 293 (337)
T cd07858 229 SEEDLGFIRNEKARRYIR-------------SLPY--TPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPY 293 (337)
T ss_pred ChHHhhhcCchhhhHHHH-------------hcCc--ccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcc
Confidence 665542110 0111100 0000 0001111122234567899999999999999999999999999
Q ss_pred CCC
Q 004954 718 LQH 720 (722)
Q Consensus 718 f~~ 720 (722)
|+.
T Consensus 294 ~~~ 296 (337)
T cd07858 294 LAS 296 (337)
T ss_pred hhh
Confidence 965
No 145
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=5.2e-37 Score=330.69 Aligned_cols=277 Identities=36% Similarity=0.527 Sum_probs=223.3
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC--
Q 004954 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE-- 489 (722)
Q Consensus 415 rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~---~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~-- 489 (722)
||++.+.||+|++|.||+|++..+++.+|||++... ......+.+|+.+++.++ |+||+++++++....
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~ 74 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLR------HENIIGLLDILRPPSPE 74 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcC------CcchhhhhhhhcccCcc
Confidence 689999999999999999999989999999998753 233456778888888775 679999999998775
Q ss_pred ---eEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEe
Q 004954 490 ---HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIID 566 (722)
Q Consensus 490 ---~l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~D 566 (722)
.+++||||+++++.+.+.... .+++..++.++.||+.||+|||+.||+|+||||+|||++. ++.++|+|
T Consensus 75 ~~~~~~lv~e~~~~~l~~~l~~~~------~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~--~~~~~L~d 146 (330)
T cd07834 75 DFNDVYIVTELMETDLHKVIKSPQ------PLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNS--NCDLKICD 146 (330)
T ss_pred cccceEEEecchhhhHHHHHhCCC------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC--CCCEEEcc
Confidence 799999999988777765322 3899999999999999999999999999999999999996 68999999
Q ss_pred cCCcccccCC------ccccccCCcccCchhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCC
Q 004954 567 LGSSCFQTDN------LCLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPI 639 (722)
Q Consensus 567 FGls~~~~~~------~~~~~gt~~y~APE~l~~~-~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~ 639 (722)
||.+...... .....+++.|+|||++.+. .++.++|+||||+++|+|++|.+||.+.+..+.+..+....+.+
T Consensus 147 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~ 226 (330)
T cd07834 147 FGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTP 226 (330)
T ss_pred cCceEeecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCC
Confidence 9998765443 2234678899999999887 78999999999999999999999999999889999999888887
Q ss_pred cHHHHhhh--hhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCC
Q 004954 640 DLEMLMQG--QEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPW 717 (722)
Q Consensus 640 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPw 717 (722)
+.+.+... .....+... ........+.......+..+.+||++||+++|.+|||+.++|+|||
T Consensus 227 ~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~ 291 (330)
T cd07834 227 SEEDLKFITSEKARNYLKS---------------LPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPY 291 (330)
T ss_pred ChhHhhhccccchhhHHhh---------------cccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCcc
Confidence 76655421 111111110 0000111122222334677899999999999999999999999999
Q ss_pred CCC
Q 004954 718 LQH 720 (722)
Q Consensus 718 f~~ 720 (722)
|++
T Consensus 292 ~~~ 294 (330)
T cd07834 292 LAQ 294 (330)
T ss_pred HHh
Confidence 975
No 146
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=8.8e-37 Score=329.38 Aligned_cols=284 Identities=23% Similarity=0.285 Sum_probs=198.4
Q ss_pred EEEEeccC--CCCceEEEEECCCCcEEEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEE
Q 004954 418 VTEYLGSA--AFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF 492 (722)
Q Consensus 418 i~~~LG~G--~fG~Vy~a~d~~tg~~vAvKil~~~~---~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~ 492 (722)
++++||+| +|++||++.+..+|+.||+|++.... .....+.+|+.+++.++ ||||+++++++...+..+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~------hpniv~~~~~~~~~~~~~ 75 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFN------HPNIVPYRATFIADNELW 75 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcC------CCCeeeEEEEEEECCEEE
Confidence 56789999 68899999999999999999987542 23345666777777764 789999999999999999
Q ss_pred EEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCcc
Q 004954 493 IVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 571 (722)
Q Consensus 493 iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~ 571 (722)
+||||+.+ ++.+++...... .+++..++.++.||+.||+|||+.||+||||||+|||++. ++.++++||+...
T Consensus 76 lv~e~~~~~~l~~~~~~~~~~----~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~--~~~~~l~~~~~~~ 149 (327)
T cd08227 76 VVTSFMAYGSAKDLICTHFMD----GMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISV--DGKVYLSGLRSNL 149 (327)
T ss_pred EEEeccCCCcHHHHHHhhccC----CCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEec--CCcEEEcccchhh
Confidence 99999985 676766543221 2889999999999999999999999999999999999986 7789999998643
Q ss_pred cccC----------CccccccCCcccCchhhcC--CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCC-
Q 004954 572 FQTD----------NLCLYVQSRSYRAPEVIIG--LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGP- 638 (722)
Q Consensus 572 ~~~~----------~~~~~~gt~~y~APE~l~~--~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~- 638 (722)
.... ......++..|+|||++.+ ..++.++|||||||++|+|++|..||................-+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 229 (327)
T cd08227 150 SMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPC 229 (327)
T ss_pred ccccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccc
Confidence 2211 1112345677999999976 45889999999999999999999999876554433333211100
Q ss_pred ------CcHHHHhhhhhhhhhhcccccchhhhhccccccccCCcc--chhhhhcccCcHHHHHHHHHhcccCCCCCcCHH
Q 004954 639 ------IDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEE--SSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAR 710 (722)
Q Consensus 639 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~--~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ 710 (722)
++.+.+.... ............ .......+.. ..........++.+.+||++||+.||++|||++
T Consensus 230 ~~~~~~~~~~~~~~~~------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ 302 (327)
T cd08227 230 LLDTTTIPAEELTMKP------SRSGANSGLGES-TTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSAS 302 (327)
T ss_pred cccccchhhhhcccCC------cccCCcCCCCcc-cccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHH
Confidence 0111100000 000000000000 0000000000 000011123456799999999999999999999
Q ss_pred HHHhCCCCCC
Q 004954 711 EALDHPWLQH 720 (722)
Q Consensus 711 ElL~HPwf~~ 720 (722)
|+|+||||+.
T Consensus 303 ell~~p~f~~ 312 (327)
T cd08227 303 TLLNHSFFKQ 312 (327)
T ss_pred HHhcChhhhh
Confidence 9999999975
No 147
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-38 Score=346.15 Aligned_cols=254 Identities=30% Similarity=0.477 Sum_probs=214.0
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeec-chhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEE
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKN-DKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF 492 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~-~~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~ 492 (722)
+.|.|+.-||.|+||+||+|.++.++-..|-|++.. .......++.|+.||..+ +||+||++++.|+..+.++
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~C------dHP~ivkLl~ayy~enkLw 105 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAEC------DHPVIVKLLSAYYFENKLW 105 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcC------CChHHHHHHHHHhccCceE
Confidence 458888999999999999999999998889998854 445667888899998776 4889999999999999999
Q ss_pred EEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCccc
Q 004954 493 IVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF 572 (722)
Q Consensus 493 iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~ 572 (722)
|+.|||+|+..+.+...-. ..+++.+++.+++|++.||.|||+++|||||||..|||++- +|.|+|+|||.+..
T Consensus 106 iliEFC~GGAVDaimlEL~----r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~Tl--dGdirLADFGVSAK 179 (1187)
T KOG0579|consen 106 ILIEFCGGGAVDAIMLELG----RVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTL--DGDIRLADFGVSAK 179 (1187)
T ss_pred EEEeecCCchHhHHHHHhc----cccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEe--cCcEeeeccccccc
Confidence 9999999887776654332 23999999999999999999999999999999999999996 89999999998754
Q ss_pred ccC---CccccccCCcccCchhhc-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHH
Q 004954 573 QTD---NLCLYVQSRSYRAPEVII-----GLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEML 644 (722)
Q Consensus 573 ~~~---~~~~~~gt~~y~APE~l~-----~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~ 644 (722)
... ....+.|||+|||||+.. ..+|++++||||||++|.||..+.+|....++.-++.+|.+--.| .
T Consensus 180 n~~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKSePP-T---- 254 (1187)
T KOG0579|consen 180 NKSTRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPP-T---- 254 (1187)
T ss_pred chhHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhcCCC-c----
Confidence 332 344589999999999864 678999999999999999999999999998888888777532111 0
Q ss_pred hhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCCC
Q 004954 645 MQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 720 (722)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~~ 720 (722)
..-|. ..+..|.|||.+||..||..||++.++|+|||+++
T Consensus 255 ---------------------------LlqPS---------~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~ 294 (1187)
T KOG0579|consen 255 ---------------------------LLQPS---------HWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQN 294 (1187)
T ss_pred ---------------------------ccCcc---------hhhhHHHHHHHHHHhcCCccCCCHHHHhhCccccc
Confidence 00111 12356899999999999999999999999999985
No 148
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=1.2e-36 Score=317.80 Aligned_cols=253 Identities=26% Similarity=0.419 Sum_probs=200.2
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec----
Q 004954 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL---- 488 (722)
Q Consensus 413 ~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~---- 488 (722)
.++|++.+.||+|+||.||+|.+..+++.+|+|++.........+..|+.+++.+. .|+||+++++.+...
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~-----~h~~i~~~~~~~~~~~~~~ 79 (272)
T cd06637 5 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYS-----HHRNIATYYGAFIKKNPPG 79 (272)
T ss_pred hhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhc-----CCCCeeeEeeEEeecCCCC
Confidence 46799999999999999999999999999999999776555567788888888774 378999999998753
Q ss_pred --CeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEE
Q 004954 489 --EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKII 565 (722)
Q Consensus 489 --~~l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~ 565 (722)
...++||||+.+ +|.+++.... ...+++..+..++.|++.||+|||+.+|+|+||||+||+++. ++.++|+
T Consensus 80 ~~~~~~iv~e~~~~~~L~~~l~~~~----~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~--~~~~~l~ 153 (272)
T cd06637 80 MDDQLWLVMEFCGAGSVTDLIKNTK----GNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTE--NAEVKLV 153 (272)
T ss_pred CCcEEEEEEEcCCCCcHHHHHHhcc----CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECC--CCCEEEc
Confidence 468999999985 6776665422 123889999999999999999999999999999999999996 7789999
Q ss_pred ecCCcccccCC---ccccccCCcccCchhhc-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcC
Q 004954 566 DLGSSCFQTDN---LCLYVQSRSYRAPEVII-----GLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLG 637 (722)
Q Consensus 566 DFGls~~~~~~---~~~~~gt~~y~APE~l~-----~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg 637 (722)
|||++...... .....+++.|+|||++. +..++.++|||||||++|+|++|..||...........+..
T Consensus 154 Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~--- 230 (272)
T cd06637 154 DFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPR--- 230 (272)
T ss_pred cCCCceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhc---
Confidence 99998754322 23356888999999986 34588899999999999999999999965433222211100
Q ss_pred CCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCC
Q 004954 638 PIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPW 717 (722)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPw 717 (722)
.......+ ...+..+.+||.+||..||.+|||+.++++|||
T Consensus 231 ------------------------------~~~~~~~~---------~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~ 271 (272)
T cd06637 231 ------------------------------NPAPRLKS---------KKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPF 271 (272)
T ss_pred ------------------------------CCCCCCCC---------CCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCC
Confidence 00000000 012356889999999999999999999999999
Q ss_pred C
Q 004954 718 L 718 (722)
Q Consensus 718 f 718 (722)
|
T Consensus 272 ~ 272 (272)
T cd06637 272 I 272 (272)
T ss_pred C
Confidence 8
No 149
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=4.9e-37 Score=330.48 Aligned_cols=243 Identities=27% Similarity=0.395 Sum_probs=192.1
Q ss_pred EEeccCCCCceEEEEECCCCcEEEEEEeecchh----hhHhHHHHHH-HHHHhcccCCCCCCceeEEEEEEEecCeEEEE
Q 004954 420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD----FFDQSLDEIK-LLKLVNKNDPADEHHILRLYDYFYHLEHLFIV 494 (722)
Q Consensus 420 ~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~----~~~~~~~E~~-il~~L~~~~~~~hpnIv~l~~~f~~~~~l~iV 494 (722)
++||+|+||+||+|++..+++.||+|++..... ....+..|.. +++. ..||||+++++.+...+..++|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~------~~h~~iv~~~~~~~~~~~~~lv 74 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKN------LKHPFLVGLHYSFQTAEKLYFV 74 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHh------CCCCCccceeeEEEcCCEEEEE
Confidence 369999999999999999999999999875421 1222333333 2333 3588999999999999999999
Q ss_pred EEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCcccc
Q 004954 495 CELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQ 573 (722)
Q Consensus 495 mEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~ 573 (722)
|||+.+ +|...+... ..+++..++.++.||+.||.|||+.||+||||||+||+++. ++.+||+|||++...
T Consensus 75 ~e~~~~~~L~~~l~~~------~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~--~~~~kl~Dfg~~~~~ 146 (321)
T cd05603 75 LDYVNGGELFFHLQRE------RCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDS--QGHVVLTDFGLCKEG 146 (321)
T ss_pred EcCCCCCCHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECC--CCCEEEccCCCCccC
Confidence 999986 454444322 23888999999999999999999999999999999999986 788999999998653
Q ss_pred cC---CccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhh
Q 004954 574 TD---NLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEI 650 (722)
Q Consensus 574 ~~---~~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~~~ 650 (722)
.. ......+|+.|+|||++.+..++.++|||||||++|+|++|..||.+.+.......+...
T Consensus 147 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~--------------- 211 (321)
T cd05603 147 VEPEETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHK--------------- 211 (321)
T ss_pred CCCCCccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcC---------------
Confidence 22 223457899999999999999999999999999999999999999887765555444311
Q ss_pred hhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCH----HHHHhCCCCCC
Q 004954 651 YKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTA----REALDHPWLQH 720 (722)
Q Consensus 651 ~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa----~ElL~HPwf~~ 720 (722)
...+| ...+..+.++|.+||+.||.+|+++ .++++||||+.
T Consensus 212 --------------------~~~~~---------~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~~ 256 (321)
T cd05603 212 --------------------PLQLP---------GGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFSP 256 (321)
T ss_pred --------------------CCCCC---------CCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcCC
Confidence 00111 1123568899999999999999875 59999999974
No 150
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=5.2e-37 Score=331.09 Aligned_cols=243 Identities=24% Similarity=0.367 Sum_probs=192.7
Q ss_pred EEeccCCCCceEEEEECCCCcEEEEEEeecchh----hhHhHHHHHHH-HHHhcccCCCCCCceeEEEEEEEecCeEEEE
Q 004954 420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD----FFDQSLDEIKL-LKLVNKNDPADEHHILRLYDYFYHLEHLFIV 494 (722)
Q Consensus 420 ~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~----~~~~~~~E~~i-l~~L~~~~~~~hpnIv~l~~~f~~~~~l~iV 494 (722)
+.||+|+||+||++++..+++.+|+|++..... .......|... ++. ..|+||+++++++...+.+++|
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~------~~h~~Iv~~~~~~~~~~~~~lv 74 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKN------VKHPFLVGLHFSFQTADKLYFV 74 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHh------CCCCCCCceeEEEEcCCeEEEE
Confidence 369999999999999999999999999975421 11222233222 222 3588999999999999999999
Q ss_pred EEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCcccc
Q 004954 495 CELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQ 573 (722)
Q Consensus 495 mEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~ 573 (722)
|||+.+ +|...+.... .+++..++.++.||+.||.|||+.||+||||||+|||++. ++.+||+|||++...
T Consensus 75 ~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~--~~~~kl~DfG~a~~~ 146 (325)
T cd05602 75 LDYINGGELFYHLQRER------CFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDS--QGHIVLTDFGLCKEN 146 (325)
T ss_pred EeCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECC--CCCEEEccCCCCccc
Confidence 999986 5655554321 2788899999999999999999999999999999999985 788999999998643
Q ss_pred cC---CccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhh
Q 004954 574 TD---NLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEI 650 (722)
Q Consensus 574 ~~---~~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~~~ 650 (722)
.. .....+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+..+.+..+....
T Consensus 147 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~-------------- 212 (325)
T cd05602 147 IEHNGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKP-------------- 212 (325)
T ss_pred ccCCCCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCC--------------
Confidence 22 2334578999999999999999999999999999999999999998877666555543110
Q ss_pred hhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHH----HHHhCCCCCC
Q 004954 651 YKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAR----EALDHPWLQH 720 (722)
Q Consensus 651 ~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~----ElL~HPwf~~ 720 (722)
..++ ...+..+.+||++||+.||.+|+++. ++++|+||..
T Consensus 213 ---------------------~~~~---------~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~~ 256 (325)
T cd05602 213 ---------------------LQLK---------PNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFSP 256 (325)
T ss_pred ---------------------cCCC---------CCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcccCC
Confidence 0000 12245688999999999999999876 8999999964
No 151
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=1.8e-36 Score=320.48 Aligned_cols=254 Identities=24% Similarity=0.302 Sum_probs=202.0
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCe
Q 004954 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 490 (722)
Q Consensus 415 rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~----~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~ 490 (722)
.|++.+.||+|+||+||++.+..+++.+|+|++.... .......+|+.+++.++ |++|+++++.+...+.
T Consensus 1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~------~~~i~~~~~~~~~~~~ 74 (285)
T cd05632 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVN------SQFVVNLAYAYETKDA 74 (285)
T ss_pred CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcC------CcCceeEEEEEecCCE
Confidence 4788999999999999999999999999999986532 12234567888888775 6799999999999999
Q ss_pred EEEEEEccccc-hHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCC
Q 004954 491 LFIVCELLRAN-LYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS 569 (722)
Q Consensus 491 l~iVmEy~~gs-Ll~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGl 569 (722)
.++||||+.++ |.+.+.... ...+++..+..++.|++.||.|||+.||+||||||+||+++. ++.++|+|||+
T Consensus 75 ~~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~--~~~~kl~Dfg~ 148 (285)
T cd05632 75 LCLVLTIMNGGDLKFHIYNMG----NPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDD--YGHIRISDLGL 148 (285)
T ss_pred EEEEEEeccCccHHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECC--CCCEEEecCCc
Confidence 99999999864 544443221 123899999999999999999999999999999999999986 67899999998
Q ss_pred cccccCC--ccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 004954 570 SCFQTDN--LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 647 (722)
Q Consensus 570 s~~~~~~--~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~ 647 (722)
+...... .....+++.|+|||++.+..++.++|+|||||++|+|++|..||.+.........+.......
T Consensus 149 ~~~~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~-------- 220 (285)
T cd05632 149 AVKIPEGESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLET-------- 220 (285)
T ss_pred ceecCCCCcccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhcc--------
Confidence 8654322 233578999999999999899999999999999999999999998765443333322110000
Q ss_pred hhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcC-----HHHHHhCCCCCC
Q 004954 648 QEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPT-----AREALDHPWLQH 720 (722)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpT-----a~ElL~HPwf~~ 720 (722)
...++ ...+..+.+|+.+||+.||++||+ +.+++.||||+.
T Consensus 221 -----------------------~~~~~---------~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~ 266 (285)
T cd05632 221 -----------------------EEVYS---------AKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRN 266 (285)
T ss_pred -----------------------ccccC---------ccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhhc
Confidence 00011 122456889999999999999999 999999999975
No 152
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=1.6e-36 Score=329.72 Aligned_cols=280 Identities=31% Similarity=0.547 Sum_probs=216.5
Q ss_pred ecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec
Q 004954 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 488 (722)
Q Consensus 412 l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~---~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~ 488 (722)
+.++|.+.+.||+|+||.||+|++..+|+.||+|++... ......+.+|+.+++.++ |+||+++++++...
T Consensus 13 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~------h~niv~~~~~~~~~ 86 (342)
T cd07879 13 LPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQ------HENVIGLLDVFTSA 86 (342)
T ss_pred cccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcC------CCCccchhheeccc
Confidence 357899999999999999999999999999999998653 222345667888877764 68999999998754
Q ss_pred C------eEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeE
Q 004954 489 E------HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI 562 (722)
Q Consensus 489 ~------~l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~v 562 (722)
. ..++||||+..++..... ..+++..+..++.|++.||+|||+.||+||||||+||+++. ++.+
T Consensus 87 ~~~~~~~~~~lv~e~~~~~l~~~~~--------~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~--~~~~ 156 (342)
T cd07879 87 VSGDEFQDFYLVMPYMQTDLQKIMG--------HPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNE--DCEL 156 (342)
T ss_pred ccCCCCceEEEEecccccCHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC--CCCE
Confidence 3 569999999876554431 12889999999999999999999999999999999999996 7889
Q ss_pred EEEecCCcccccCCccccccCCcccCchhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcH
Q 004954 563 KIIDLGSSCFQTDNLCLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDL 641 (722)
Q Consensus 563 kL~DFGls~~~~~~~~~~~gt~~y~APE~l~~-~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~ 641 (722)
+|+|||++...........+++.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+....+..+....+.+..
T Consensus 157 kL~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 236 (342)
T cd07879 157 KILDFGLARHADAEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGP 236 (342)
T ss_pred EEeeCCCCcCCCCCCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCH
Confidence 99999998766554445577889999999876 45889999999999999999999999998877888888877776665
Q ss_pred HHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCCC
Q 004954 642 EMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 720 (722)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~~ 720 (722)
..+......... .+.. . ....+ ...+.......+..+.+||++||+.||.+||++.++|.||||+.
T Consensus 237 ~~~~~~~~~~~~-------~~~~----~-~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~ 302 (342)
T cd07879 237 EFVQKLEDKAAK-------SYIK----S-LPKYP-RKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDS 302 (342)
T ss_pred HHHHHhcccchH-------HHHh----h-cCCcc-cchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhh
Confidence 544332211100 0000 0 00001 11112222234567899999999999999999999999999974
No 153
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=2.6e-36 Score=328.39 Aligned_cols=281 Identities=31% Similarity=0.541 Sum_probs=218.7
Q ss_pred ecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec
Q 004954 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 488 (722)
Q Consensus 412 l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~---~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~ 488 (722)
+.++|++.+.||+|+||.||++.+..+|+.||||++... ......+.+|+.+++.++ |+||+++++++...
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~~~ 86 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMK------HENVIGLLDVFTPD 86 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcC------CCCccceeeeecCC
Confidence 568899999999999999999999999999999998642 222345667888888775 67999999998765
Q ss_pred C------eEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeE
Q 004954 489 E------HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI 562 (722)
Q Consensus 489 ~------~l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~v 562 (722)
. ..++||||+++++..++.. ..+++..++.++.||+.||+|||+.||+||||||+||+++. ++.+
T Consensus 87 ~~~~~~~~~~lv~e~~~~~l~~~~~~-------~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~--~~~~ 157 (343)
T cd07880 87 LSLDRFHDFYLVMPFMGTDLGKLMKH-------EKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNE--DCEL 157 (343)
T ss_pred ccccccceEEEEEecCCCCHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC--CCCE
Confidence 3 4689999997777666542 12889999999999999999999999999999999999985 7789
Q ss_pred EEEecCCcccccCCccccccCCcccCchhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcH
Q 004954 563 KIIDLGSSCFQTDNLCLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDL 641 (722)
Q Consensus 563 kL~DFGls~~~~~~~~~~~gt~~y~APE~l~~-~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~ 641 (722)
+|+|||++...........+++.|+|||.+.+ ..++.++|+|||||++|+|++|+.||.+.+....+..+.+..+..+.
T Consensus 158 kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 237 (343)
T cd07880 158 KILDFGLARQTDSEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSK 237 (343)
T ss_pred EEeecccccccccCccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCH
Confidence 99999999876655555677899999999876 45789999999999999999999999988777777777776666665
Q ss_pred HHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCCC
Q 004954 642 EMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 720 (722)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~~ 720 (722)
+.......... ..+ ...+.... ...+.......+..+.++|.+||+.||++|||+.+++.||||+.
T Consensus 238 ~~~~~~~~~~~------~~~-----~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~ 303 (343)
T cd07880 238 EFVQKLQSEDA------KNY-----VKKLPRFR--KKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEE 303 (343)
T ss_pred HHHHhhcchhH------HHH-----HHhccccC--cchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhh
Confidence 54333211100 000 00000000 01111222344567899999999999999999999999999975
No 154
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=1.3e-36 Score=319.66 Aligned_cols=254 Identities=26% Similarity=0.410 Sum_probs=201.6
Q ss_pred ecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe----
Q 004954 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH---- 487 (722)
Q Consensus 412 l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~---- 487 (722)
..++|++.+.||.|+||.||+|++..+++.+|+|++.........+..|+.+++++. .|+||+++++++..
T Consensus 14 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~-----~h~~i~~~~~~~~~~~~~ 88 (282)
T cd06636 14 PAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYS-----HHRNIATYYGAFIKKSPP 88 (282)
T ss_pred hhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhc-----CCCcEEEEeeehhccccc
Confidence 347899999999999999999999999999999999776555566778888888874 37899999999863
Q ss_pred --cCeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEE
Q 004954 488 --LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKI 564 (722)
Q Consensus 488 --~~~l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL 564 (722)
....++||||+.+ +|.+++..... ..+++..++.++.||+.||.|||+.||+|+||+|+||+++. ++.++|
T Consensus 89 ~~~~~~~iv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~--~~~~~l 162 (282)
T cd06636 89 GHDDQLWLVMEFCGAGSVTDLVKNTKG----NALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTE--NAEVKL 162 (282)
T ss_pred CCCCEEEEEEEeCCCCcHHHHHHHccC----CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC--CCCEEE
Confidence 4678999999985 67666654321 23788889999999999999999999999999999999995 778999
Q ss_pred EecCCcccccCC---ccccccCCcccCchhhc-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhc
Q 004954 565 IDLGSSCFQTDN---LCLYVQSRSYRAPEVII-----GLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGML 636 (722)
Q Consensus 565 ~DFGls~~~~~~---~~~~~gt~~y~APE~l~-----~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~l 636 (722)
+|||++...... .....+++.|+|||.+. +..++.++|+|||||++|+|++|..||...........+...
T Consensus 163 ~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~- 241 (282)
T cd06636 163 VDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRN- 241 (282)
T ss_pred eeCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhhC-
Confidence 999998654322 23356889999999986 346788999999999999999999999665432222111100
Q ss_pred CCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCC
Q 004954 637 GPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHP 716 (722)
Q Consensus 637 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HP 716 (722)
.+.. ......+..+.+||++||+.||.+|||+.|+|+||
T Consensus 242 -------------------------------------~~~~----~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~ 280 (282)
T cd06636 242 -------------------------------------PPPK----LKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHP 280 (282)
T ss_pred -------------------------------------CCCC----CcccccCHHHHHHHHHHhCCChhhCcCHHHHhcCC
Confidence 0000 00112346799999999999999999999999999
Q ss_pred CC
Q 004954 717 WL 718 (722)
Q Consensus 717 wf 718 (722)
||
T Consensus 281 ~~ 282 (282)
T cd06636 281 FI 282 (282)
T ss_pred CC
Confidence 97
No 155
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=1e-36 Score=331.40 Aligned_cols=279 Identities=34% Similarity=0.605 Sum_probs=221.6
Q ss_pred ecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec
Q 004954 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 488 (722)
Q Consensus 412 l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~---~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~ 488 (722)
+.++|++.+.||+|++|.||+|++..+++.||+|++... ........+|+.+++.+. |+||+++++++...
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~~~ 86 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMD------HENVIGLLDVFTPA 86 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhcc------CCCHHHHHHHhhcc
Confidence 467899999999999999999999999999999998643 223345667888887774 67999999988766
Q ss_pred Ce------EEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeE
Q 004954 489 EH------LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI 562 (722)
Q Consensus 489 ~~------l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~v 562 (722)
.. .++|+||++++|.+++.. ..+++..++.++.||+.||+|||+.||+|+||||+||+++. ++.+
T Consensus 87 ~~~~~~~~~~lv~e~~~~~L~~~~~~-------~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~--~~~~ 157 (343)
T cd07851 87 SSLEDFQDVYLVTHLMGADLNNIVKC-------QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNE--DCEL 157 (343)
T ss_pred ccccccccEEEEEecCCCCHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECC--CCCE
Confidence 54 899999998888777653 12899999999999999999999999999999999999996 7889
Q ss_pred EEEecCCcccccCCccccccCCcccCchhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcH
Q 004954 563 KIIDLGSSCFQTDNLCLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDL 641 (722)
Q Consensus 563 kL~DFGls~~~~~~~~~~~gt~~y~APE~l~~-~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~ 641 (722)
+|+|||++...........+++.|+|||.+.+ ..++.++|||||||++|+|++|+.||.+......+..+....+.++.
T Consensus 158 kL~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~ 237 (343)
T cd07851 158 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDE 237 (343)
T ss_pred EEccccccccccccccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCH
Confidence 99999999876665556678899999999865 36789999999999999999999999998888888888887777666
Q ss_pred HHHhhhhhh--hhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCC
Q 004954 642 EMLMQGQEI--YKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQ 719 (722)
Q Consensus 642 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~ 719 (722)
.++...... ..+.. ... ......+.......+..+.+||++||+.||.+|||+.+||+||||+
T Consensus 238 ~~~~~~~~~~~~~~~~-------------~~~--~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~ 302 (343)
T cd07851 238 ELLQKISSESARNYIQ-------------SLP--QMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLA 302 (343)
T ss_pred HHHhhccchhHHHHHH-------------hcc--ccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCcc
Confidence 554432210 00000 000 0000111111222357799999999999999999999999999997
Q ss_pred C
Q 004954 720 H 720 (722)
Q Consensus 720 ~ 720 (722)
+
T Consensus 303 ~ 303 (343)
T cd07851 303 E 303 (343)
T ss_pred c
Confidence 5
No 156
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=4.2e-36 Score=310.09 Aligned_cols=249 Identities=25% Similarity=0.363 Sum_probs=203.6
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 004954 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (722)
Q Consensus 415 rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~---~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (722)
.|.+.+.||+|++|.||++.+..+++.+++|.+... ......+.+|+++++.++ ||||+++++++...+..
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~~ 74 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLD------SSYIIRYYESFLDKGKL 74 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcC------CCCeehheeeeccCCEE
Confidence 488999999999999999999999999999998643 334456677788777664 78999999999999999
Q ss_pred EEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCc
Q 004954 492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (722)
Q Consensus 492 ~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 570 (722)
++||||+.+ +|.+++..... ..++...++.++.|++.||.|||+.|++|+||||+||+++. ++.++|+|||++
T Consensus 75 ~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~--~~~~~l~df~~~ 148 (256)
T cd08529 75 NIVMEYAENGDLHKLLKMQRG----RPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDA--YDNVKIGDLGVA 148 (256)
T ss_pred EEEEEeCCCCcHHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeC--CCCEEEcccccc
Confidence 999999974 77777664321 23889999999999999999999999999999999999996 788999999988
Q ss_pred ccccCCc---cccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 004954 571 CFQTDNL---CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 647 (722)
Q Consensus 571 ~~~~~~~---~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~ 647 (722)
....... ....+++.|+|||++.+..++.++|+|||||++|+|++|+.||...+.......+....
T Consensus 149 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~----------- 217 (256)
T cd08529 149 KLLSDNTNFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGV----------- 217 (256)
T ss_pred eeccCccchhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC-----------
Confidence 7654332 22467889999999999889999999999999999999999998776554443332100
Q ss_pred hhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCC
Q 004954 648 QEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 718 (722)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf 718 (722)
...++ ...+..+.++|++||+.+|++||++.++++|||+
T Consensus 218 -----------------------~~~~~---------~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 256 (256)
T cd08529 218 -----------------------FPPVS---------QMYSQQLAQLIDQCLTKDYRQRPDTFQLLRNPSL 256 (256)
T ss_pred -----------------------CCCCc---------cccCHHHHHHHHHHccCCcccCcCHHHHhhCCCC
Confidence 00011 0234568999999999999999999999999996
No 157
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=1.9e-36 Score=322.06 Aligned_cols=280 Identities=27% Similarity=0.414 Sum_probs=215.8
Q ss_pred ecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchh---hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec
Q 004954 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 488 (722)
Q Consensus 412 l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~---~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~ 488 (722)
..++|++.++||.|+||.||+|++..+++.+|+|++..... ......+|+++++.++ |+||+++++.+...
T Consensus 6 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~ 79 (311)
T cd07866 6 KLRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLK------HPNVVPLIDMAVER 79 (311)
T ss_pred ccccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcC------CCCccchhhheecc
Confidence 35899999999999999999999999999999998864321 1234567888888775 67999999987643
Q ss_pred --------CeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCC
Q 004954 489 --------EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRC 560 (722)
Q Consensus 489 --------~~l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~ 560 (722)
..+++||||+.+++...+.... ..+++..++.++.||++||.|||+.||+|+||||+||+++. ++
T Consensus 80 ~~~~~~~~~~~~lv~~~~~~~l~~~~~~~~-----~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~--~~ 152 (311)
T cd07866 80 PDKSKRKRGSVYMVTPYMDHDLSGLLENPS-----VKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDN--QG 152 (311)
T ss_pred cccccccCceEEEEEecCCcCHHHHHhccc-----cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECC--CC
Confidence 3479999999988777665322 23899999999999999999999999999999999999996 78
Q ss_pred eEEEEecCCcccccCCc--------------cccccCCcccCchhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCChH
Q 004954 561 EIKIIDLGSSCFQTDNL--------------CLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAV 625 (722)
Q Consensus 561 ~vkL~DFGls~~~~~~~--------------~~~~gt~~y~APE~l~~~-~~s~ksDIWSLGviL~elltG~~PF~~~~~ 625 (722)
.++|+|||++....... ....+++.|+|||.+.+. .++.++|||||||++|+|++|++||.+.+.
T Consensus 153 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~ 232 (311)
T cd07866 153 ILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSD 232 (311)
T ss_pred CEEECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCH
Confidence 89999999886543221 123457889999998754 578999999999999999999999999888
Q ss_pred HHHHHHHHhhcCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCC
Q 004954 626 VMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQR 705 (722)
Q Consensus 626 ~e~l~~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~k 705 (722)
...+..+....+.++...+..+......... ......+ ..+........+.+.+||++||+.||.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~--~~~~~~~~~~~~~~~~~i~~~l~~~p~~ 298 (311)
T cd07866 233 IDQLHLIFKLCGTPTEETWPGWRSLPGCEGV------------HSFTNYP--RTLEERFGKLGPEGLDLLSKLLSLDPYK 298 (311)
T ss_pred HHHHHHHHHHhCCCChhhchhhhhccccccc------------ccCCCCC--ccHHHHcccCChhHHHHHHHHcccCccc
Confidence 8888888877776665555443222211100 0000001 1111222233467899999999999999
Q ss_pred CcCHHHHHhCCCC
Q 004954 706 RPTAREALDHPWL 718 (722)
Q Consensus 706 RpTa~ElL~HPwf 718 (722)
|||+.|+|.||||
T Consensus 299 R~t~~ell~~~~f 311 (311)
T cd07866 299 RLTASDALEHPYF 311 (311)
T ss_pred CcCHHHHhcCCCC
Confidence 9999999999998
No 158
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.3e-37 Score=338.17 Aligned_cols=251 Identities=27% Similarity=0.398 Sum_probs=216.5
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCe
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 490 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~---~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~ 490 (722)
++|.+++++|+|+||.+++++++..++.+++|.+.... ...+....|..++.+++ |||||.+++.|..++.
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~------hP~iv~y~ds~~~~~~ 77 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLL------HPNIVEYKDSFEEDGQ 77 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhcc------CCCeeeeccchhcCCc
Confidence 67999999999999999999999999999999987543 33446778888888875 7899999999999988
Q ss_pred -EEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecC
Q 004954 491 -LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (722)
Q Consensus 491 -l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFG 568 (722)
++|||+|++| ++.+.++..+ ...++++.+..|+.||+.|+.|||+++|+|||||+.||+++. +..|+|.|||
T Consensus 78 ~l~Ivm~Y~eGg~l~~~i~~~k----~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk--~~~VkLgDfG 151 (426)
T KOG0589|consen 78 LLCIVMEYCEGGDLAQLIKEQK----GVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTK--DKKVKLGDFG 151 (426)
T ss_pred eEEEEEeecCCCCHHHHHHHHh----hccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccc--cCceeecchh
Confidence 9999999986 4555555444 234999999999999999999999999999999999999997 7778999999
Q ss_pred CcccccCC---ccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHh
Q 004954 569 SSCFQTDN---LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLM 645 (722)
Q Consensus 569 ls~~~~~~---~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~ 645 (722)
+|+..+.. ..+.+|||.|++||++.+.+|..++|||||||++|||++-+++|.+.+...+..+|......+
T Consensus 152 laK~l~~~~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~P------ 225 (426)
T KOG0589|consen 152 LAKILNPEDSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYSP------ 225 (426)
T ss_pred hhhhcCCchhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCCC------
Confidence 99987655 456899999999999999999999999999999999999999999999988888887443111
Q ss_pred hhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCC
Q 004954 646 QGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQ 719 (722)
Q Consensus 646 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~ 719 (722)
+| .....+++.||+.||+.+|..||+|.++|.+|.++
T Consensus 226 ----------------------------lp---------~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P~l~ 262 (426)
T KOG0589|consen 226 ----------------------------LP---------SMYSSELRSLVKSMLRKNPEHRPSALELLRRPHLL 262 (426)
T ss_pred ----------------------------CC---------ccccHHHHHHHHHHhhcCCccCCCHHHHhhChhhh
Confidence 11 12345688999999999999999999999999875
No 159
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=1e-36 Score=329.82 Aligned_cols=280 Identities=30% Similarity=0.533 Sum_probs=218.9
Q ss_pred ecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe-
Q 004954 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH- 487 (722)
Q Consensus 412 l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~---~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~- 487 (722)
+..+|.+.+.||+|+||.||++.++.+|+.||+|++.... .....+.+|+.+++.++ ||||++++++|..
T Consensus 3 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~iv~~~~~~~~~ 76 (334)
T cd07855 3 VGSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFK------HDNIIAIRDILRPP 76 (334)
T ss_pred hhhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcC------CCCccCHHHhcccc
Confidence 3478999999999999999999999999999999987532 23345667888888775 6899999998863
Q ss_pred ---cCeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEE
Q 004954 488 ---LEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKI 564 (722)
Q Consensus 488 ---~~~l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL 564 (722)
...+++||||+.++|..++.... .+++..++.++.||+.||.|||+.||+||||||+||+++. ++.+||
T Consensus 77 ~~~~~~~~lv~e~~~~~l~~~~~~~~------~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~--~~~~kl 148 (334)
T cd07855 77 GADFKDVYVVMDLMESDLHHIIHSDQ------PLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNE--DCELRI 148 (334)
T ss_pred CCCCceEEEEEehhhhhHHHHhccCC------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcC--CCcEEe
Confidence 35789999999988777765322 2899999999999999999999999999999999999996 888999
Q ss_pred EecCCcccccCCc-------cccccCCcccCchhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhc
Q 004954 565 IDLGSSCFQTDNL-------CLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGML 636 (722)
Q Consensus 565 ~DFGls~~~~~~~-------~~~~gt~~y~APE~l~~-~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~l 636 (722)
+|||++....... ....++..|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+....+..+....
T Consensus 149 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~ 228 (334)
T cd07855 149 GDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVL 228 (334)
T ss_pred cccccceeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHh
Confidence 9999986543211 23467889999999866 458899999999999999999999999988888888888888
Q ss_pred CCCcHHHHhhhhh--hhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHh
Q 004954 637 GPIDLEMLMQGQE--IYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 714 (722)
Q Consensus 637 g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~ 714 (722)
|.++.+.+..... ...++. .... .....+.......+..+.+||++||+.+|++|||+.++|.
T Consensus 229 g~~~~~~~~~~~~~~~~~~~~-------------~~~~--~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 293 (334)
T cd07855 229 GSPSEEVLNRIGSDRVRKYIQ-------------NLPR--KQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQ 293 (334)
T ss_pred CCChhHhhhhhchhhHHHHHh-------------hccc--CCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 8777665432210 000000 0000 0001111122234677999999999999999999999999
Q ss_pred CCCCCC
Q 004954 715 HPWLQH 720 (722)
Q Consensus 715 HPwf~~ 720 (722)
||||+.
T Consensus 294 ~~~~~~ 299 (334)
T cd07855 294 HPFLAQ 299 (334)
T ss_pred Chhhhh
Confidence 999964
No 160
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=2.2e-36 Score=320.84 Aligned_cols=283 Identities=27% Similarity=0.456 Sum_probs=217.4
Q ss_pred CceecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEE
Q 004954 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYF 485 (722)
Q Consensus 409 ~~~l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~---~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f 485 (722)
+....++|++.+.||+|+||.||+|.++.+|+.||+|+++... .......+|+.+++.++ ||||+++++++
T Consensus 2 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~------h~~i~~~~~~~ 75 (302)
T cd07864 2 GKRCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLN------HRNIVNLKEIV 75 (302)
T ss_pred chhhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCC------CCCeeeeehee
Confidence 3456688999999999999999999999999999999987532 22234566778887774 68999999998
Q ss_pred EecC----------eEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEc
Q 004954 486 YHLE----------HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIK 555 (722)
Q Consensus 486 ~~~~----------~l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~ 555 (722)
.... .+++||||+++++...+.... ..+++..++.++.||+.||+|||+.||+|+||||+||+++
T Consensus 76 ~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~ 150 (302)
T cd07864 76 TDKQDALDFKKDKGAFYLVFEYMDHDLMGLLESGL-----VHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLN 150 (302)
T ss_pred cCcchhhhccccCCcEEEEEcccCccHHHHHhcCC-----CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC
Confidence 7654 799999999998877765431 2389999999999999999999999999999999999998
Q ss_pred ccCCCeEEEEecCCcccccCCc----cccccCCcccCchhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHH
Q 004954 556 SYQRCEIKIIDLGSSCFQTDNL----CLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILA 630 (722)
Q Consensus 556 ~~~~~~vkL~DFGls~~~~~~~----~~~~gt~~y~APE~l~~~-~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~ 630 (722)
. ++.+||+|||++....... ....++..|+|||.+.+. .++.++|||||||++|+|++|++||...+..+.+.
T Consensus 151 ~--~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~ 228 (302)
T cd07864 151 N--KGQIKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLE 228 (302)
T ss_pred C--CCcEEeCcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHH
Confidence 5 7889999999987654322 123457789999988653 47889999999999999999999999888888888
Q ss_pred HHHhhcCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHH
Q 004954 631 RIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAR 710 (722)
Q Consensus 631 ~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ 710 (722)
.+....+..+...+........+...... ......+.......+..+.+||.+||+.||++|||+.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~ 294 (302)
T cd07864 229 LISRLCGSPCPAVWPDVIKLPYFNTMKPK--------------KQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAE 294 (302)
T ss_pred HHHHHhCCCChhhcccccccccccccccc--------------cccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHH
Confidence 88777766655544332222111100000 0000011111222356789999999999999999999
Q ss_pred HHHhCCCC
Q 004954 711 EALDHPWL 718 (722)
Q Consensus 711 ElL~HPwf 718 (722)
++|.||||
T Consensus 295 ~il~~~~~ 302 (302)
T cd07864 295 EALNSPWL 302 (302)
T ss_pred HHhcCCCC
Confidence 99999997
No 161
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=1.8e-36 Score=319.11 Aligned_cols=248 Identities=24% Similarity=0.301 Sum_probs=191.8
Q ss_pred eccCCCCceEEEEECCCCcEEEEEEeecchh----hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEEEc
Q 004954 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD----FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCEL 497 (722)
Q Consensus 422 LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~----~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~iVmEy 497 (722)
||+|+||+||+++++.+|+.+|+|.+..... .......|+.+++.++ ||||+++++.+....+.++||||
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~------hp~i~~~~~~~~~~~~~~lv~e~ 74 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVN------SPFIVNLAYAFESKTHLCLVMSL 74 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcC------CCcEEEEEEEEecCCeEEEEEec
Confidence 7999999999999999999999999864321 1233455778877764 78999999999999999999999
Q ss_pred ccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCcccccCC
Q 004954 498 LRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDN 576 (722)
Q Consensus 498 ~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~~~ 576 (722)
+.| +|...+..... ..+++..+..++.||+.||+|||+.||+||||||+||+++. ++.++|+|||++......
T Consensus 75 ~~g~~L~~~~~~~~~----~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~--~~~~~l~Dfg~~~~~~~~ 148 (277)
T cd05607 75 MNGGDLKYHIYNVGE----RGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDD--QGNCRLSDLGLAVELKDG 148 (277)
T ss_pred CCCCCHHHHHHhccc----cCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcC--CCCEEEeeceeeeecCCC
Confidence 975 55555543221 22788899999999999999999999999999999999986 788999999998765432
Q ss_pred c--cccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhh
Q 004954 577 L--CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYF 654 (722)
Q Consensus 577 ~--~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~~~~~~~ 654 (722)
. ....+++.|+|||++.+..++.++|||||||++|+|++|+.||...........+...
T Consensus 149 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~------------------- 209 (277)
T cd05607 149 KTITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRR------------------- 209 (277)
T ss_pred ceeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHH-------------------
Confidence 2 2346889999999999988999999999999999999999999754221111111000
Q ss_pred cccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCH----HHHHhCCCCCC
Q 004954 655 TKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTA----REALDHPWLQH 720 (722)
Q Consensus 655 ~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa----~ElL~HPwf~~ 720 (722)
.....++. .....+..+++||++||+.||.+||++ ++++.||||+.
T Consensus 210 --------------~~~~~~~~------~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~ 259 (277)
T cd05607 210 --------------TLEDEVKF------EHQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKT 259 (277)
T ss_pred --------------hhcccccc------ccccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcChhhcC
Confidence 00000000 011234668999999999999999999 77889999964
No 162
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=5.7e-36 Score=323.84 Aligned_cols=279 Identities=34% Similarity=0.563 Sum_probs=220.5
Q ss_pred ecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe-
Q 004954 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH- 487 (722)
Q Consensus 412 l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~---~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~- 487 (722)
+.++|++.+.||.|+||.||++.+..+++.+|+|++... ......+..|+.+++.++ ||||++++++|..
T Consensus 8 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~------hpniv~~~~~~~~~ 81 (328)
T cd07856 8 ITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLR------HENIISLSDIFISP 81 (328)
T ss_pred cccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcC------CCCeeeEeeeEecC
Confidence 578899999999999999999999999999999987542 223355667888888775 7899999999876
Q ss_pred cCeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEec
Q 004954 488 LEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDL 567 (722)
Q Consensus 488 ~~~l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DF 567 (722)
....++||||++++|..++... .++...+..++.||++||+|||+.||+|+||+|+||+++. ++.++|+||
T Consensus 82 ~~~~~lv~e~~~~~L~~~~~~~-------~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~--~~~~~l~df 152 (328)
T cd07856 82 LEDIYFVTELLGTDLHRLLTSR-------PLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINE--NCDLKICDF 152 (328)
T ss_pred CCcEEEEeehhccCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECC--CCCEEeCcc
Confidence 4678999999988877665421 2778888999999999999999999999999999999985 788999999
Q ss_pred CCcccccCCccccccCCcccCchhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhh
Q 004954 568 GSSCFQTDNLCLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQ 646 (722)
Q Consensus 568 Gls~~~~~~~~~~~gt~~y~APE~l~~-~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~ 646 (722)
|.+...........+++.|+|||.+.+ ..++.++|||||||++|+|++|++||...........+.+.+|.++.+....
T Consensus 153 g~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (328)
T cd07856 153 GLARIQDPQMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINT 232 (328)
T ss_pred ccccccCCCcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence 998766554455567889999999866 5689999999999999999999999998888777788888888877665443
Q ss_pred hhhh--hhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCCC
Q 004954 647 GQEI--YKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 720 (722)
Q Consensus 647 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~~ 720 (722)
.... .+++. . +. ...........+..+..+.++|++||+.+|++|||+.++|.||||+.
T Consensus 233 ~~~~~~~~~~~---------~----~~--~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~ 293 (328)
T cd07856 233 ICSENTLRFVQ---------S----LP--KREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAP 293 (328)
T ss_pred ccchhhHHHHh---------h----cc--ccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCcccc
Confidence 2110 00000 0 00 00011111222334577999999999999999999999999999964
No 163
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=2.9e-36 Score=322.67 Aligned_cols=287 Identities=26% Similarity=0.320 Sum_probs=206.4
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~--~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (722)
++|++.+.||+|+||.||++.+..++..+|+|.+... .....++.+|+++++.++ ||||+++++.+...+++
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~~~~~~ 74 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECN------SPYIVGFYGAFYSDGEI 74 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCC------CCCCCeEEEEEeeCCEE
Confidence 4699999999999999999999999999999998754 223455777888888774 68999999999999999
Q ss_pred EEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHH-CCCccccCCCCceEEcccCCCeEEEEecCC
Q 004954 492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS-LGIIHCDLKPENILIKSYQRCEIKIIDLGS 569 (722)
Q Consensus 492 ~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs-~gIvHrDLKp~NILl~~~~~~~vkL~DFGl 569 (722)
++||||+.+ +|.+++.... .+++..+..++.|++.||.|||+ .+++|+||||+|||++. ++.++|+|||+
T Consensus 75 ~lv~ey~~~~~L~~~l~~~~------~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~--~~~~~l~dfg~ 146 (308)
T cd06615 75 SICMEHMDGGSLDQVLKKAG------RIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNS--RGEIKLCDFGV 146 (308)
T ss_pred EEEeeccCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEec--CCcEEEccCCC
Confidence 999999985 6666665432 28899999999999999999997 59999999999999985 77899999998
Q ss_pred cccccCC-ccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhh
Q 004954 570 SCFQTDN-LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQ 648 (722)
Q Consensus 570 s~~~~~~-~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~ 648 (722)
+...... .....+++.|+|||.+.+..++.++|+|||||++|+|++|+.||...+.......+.......+......
T Consensus 147 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 224 (308)
T cd06615 147 SGQLIDSMANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHR-- 224 (308)
T ss_pred cccccccccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcc--
Confidence 8654332 3345788999999999888899999999999999999999999977654333222211110000000000
Q ss_pred hhhhhhcccccchhhhhccc-cccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCCCC
Q 004954 649 EIYKYFTKEYDLYYINEETN-QLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQHP 721 (722)
Q Consensus 649 ~~~~~~~~~~~~~~~~~~~~-~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~~~ 721 (722)
.................... ......|. +. ....+..+.+||.+||..+|++|||+.++++||||++.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~ 293 (308)
T cd06615 225 PVSGHPPDSPRPMAIFELLDYIVNEPPPK---LP--SGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRA 293 (308)
T ss_pred cccCCCCCccchhhHHHHHHHHhcCCCcc---Cc--CcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhhc
Confidence 00000000000000000000 00000010 00 01135679999999999999999999999999999763
No 164
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=2.1e-36 Score=327.49 Aligned_cols=255 Identities=22% Similarity=0.311 Sum_probs=194.8
Q ss_pred eecCcEEEEEEeccCCCCceEEEEE-----CCCCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEE
Q 004954 411 VIAGRYYVTEYLGSAAFSKVFQAQD-----LHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYD 483 (722)
Q Consensus 411 ~l~~rY~i~~~LG~G~fG~Vy~a~d-----~~tg~~vAvKil~~~~--~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~ 483 (722)
+-.++|++.++||+|+||.||+|.+ ..+++.||||+++... .....+.+|+.+++.+. .||||+++++
T Consensus 4 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-----~h~niv~~~~ 78 (338)
T cd05102 4 FPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIG-----NHLNVVNLLG 78 (338)
T ss_pred cchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhc-----cCcceeeEEe
Confidence 3357899999999999999999975 2456789999987532 23456778999988884 3789999999
Q ss_pred EEEec-CeEEEEEEccc-cchHHHHhhhhccC------------------------------------------------
Q 004954 484 YFYHL-EHLFIVCELLR-ANLYEFQKFNQESG------------------------------------------------ 513 (722)
Q Consensus 484 ~f~~~-~~l~iVmEy~~-gsLl~~l~~~~~~~------------------------------------------------ 513 (722)
++... ..+++||||+. |+|.+++.......
T Consensus 79 ~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (338)
T cd05102 79 ACTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTN 158 (338)
T ss_pred EecCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccc
Confidence 88764 46899999997 56777765432100
Q ss_pred --------CCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCcccccCCc-----ccc
Q 004954 514 --------GEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNL-----CLY 580 (722)
Q Consensus 514 --------~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~~~~-----~~~ 580 (722)
....+++..+..++.||+.||+|||+.||+||||||+|||++. ++.+||+|||++....... ...
T Consensus 159 ~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~--~~~~kl~DfG~a~~~~~~~~~~~~~~~ 236 (338)
T cd05102 159 PPQETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSE--NNVVKICDFGLARDIYKDPDYVRKGSA 236 (338)
T ss_pred cchhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcC--CCcEEEeecccccccccCcchhcccCC
Confidence 0124788889999999999999999999999999999999985 7789999999987543221 123
Q ss_pred ccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhccccc
Q 004954 581 VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYD 659 (722)
Q Consensus 581 ~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~~~~~~~~~~~~ 659 (722)
.+++.|+|||++.+..++.++|||||||++|||++ |..||.+....+.+......
T Consensus 237 ~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~------------------------ 292 (338)
T cd05102 237 RLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKD------------------------ 292 (338)
T ss_pred CCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhc------------------------
Confidence 34678999999999999999999999999999997 99999875433222221100
Q ss_pred chhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHh
Q 004954 660 LYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 714 (722)
Q Consensus 660 ~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~ 714 (722)
......| ...++.+.+||.+||+.||.+|||+.|+++
T Consensus 293 ---------~~~~~~~---------~~~~~~l~~li~~cl~~dp~~RPs~~el~~ 329 (338)
T cd05102 293 ---------GTRMRAP---------ENATPEIYRIMLACWQGDPKERPTFSALVE 329 (338)
T ss_pred ---------CCCCCCC---------CCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 0000011 123466889999999999999999999986
No 165
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=3.6e-36 Score=326.92 Aligned_cols=279 Identities=26% Similarity=0.413 Sum_probs=210.2
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch-hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec---
Q 004954 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL--- 488 (722)
Q Consensus 413 ~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~-~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~--- 488 (722)
..+|++.+.||.|+||.||+|.+..+|+.||+|.+.... .......+|+.+++.++ ||||+++++++...
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~------h~~i~~~~~~~~~~~~~ 77 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLD------HDNIVKVYEVLGPSGSD 77 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcC------CCcchhhHhhhcccccc
Confidence 579999999999999999999999999999999886543 33355677888888775 67999999776643
Q ss_pred -----------CeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEccc
Q 004954 489 -----------EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSY 557 (722)
Q Consensus 489 -----------~~l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~ 557 (722)
...++||||++++|.+++... .+++..++.++.||+.||.|||+.||+||||||+||+++.
T Consensus 78 ~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~-------~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~- 149 (342)
T cd07854 78 LTEDVGSLTELNSVYIVQEYMETDLANVLEQG-------PLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINT- 149 (342)
T ss_pred cccccccccccceEEEEeecccccHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcC-
Confidence 368999999998777666421 2889999999999999999999999999999999999975
Q ss_pred CCCeEEEEecCCcccccCC------ccccccCCcccCchhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHH
Q 004954 558 QRCEIKIIDLGSSCFQTDN------LCLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILA 630 (722)
Q Consensus 558 ~~~~vkL~DFGls~~~~~~------~~~~~gt~~y~APE~l~~-~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~ 630 (722)
.+..++|+|||.+...... .....++..|+|||++.+ ..++.++|||||||++|+|++|+.||...+..+...
T Consensus 150 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~ 229 (342)
T cd07854 150 EDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQ 229 (342)
T ss_pred CCceEEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 3567999999998754322 122356888999998754 568889999999999999999999998877776666
Q ss_pred HHHhhcCCCcHHHHhhhhh-hhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCH
Q 004954 631 RIIGMLGPIDLEMLMQGQE-IYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTA 709 (722)
Q Consensus 631 ~i~~~lg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa 709 (722)
.+.........+....... ...... ....+............+.++++||++||+.||.+|||+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~ 294 (342)
T cd07854 230 LILESVPVVREEDRNELLNVIPSFVR---------------NDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTA 294 (342)
T ss_pred HHHHhcCCCChHHhhhhhhhhhhhhh---------------hcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCH
Confidence 6655444333222211100 000000 000011111222233456778999999999999999999
Q ss_pred HHHHhCCCCCC
Q 004954 710 REALDHPWLQH 720 (722)
Q Consensus 710 ~ElL~HPwf~~ 720 (722)
.++|+||||+.
T Consensus 295 ~ell~h~~~~~ 305 (342)
T cd07854 295 EEALMHPYMSC 305 (342)
T ss_pred HHHhCCCcccc
Confidence 99999999973
No 166
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=4e-36 Score=318.19 Aligned_cols=255 Identities=31% Similarity=0.485 Sum_probs=201.2
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch-hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 004954 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (722)
Q Consensus 413 ~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~-~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (722)
.+.|+++++||+|+||.||++++..+++.+++|++.... .....+.+|+.+++.++ |+||+++++.+......
T Consensus 11 ~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~~ 84 (292)
T cd06644 11 NEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCN------HPYIVKLLGAFYWDGKL 84 (292)
T ss_pred chhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCC------CCcEeeeEEEEEeCCeE
Confidence 467999999999999999999999999999999987543 33455667777777664 78999999999999999
Q ss_pred EEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCcc
Q 004954 492 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 571 (722)
Q Consensus 492 ~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~ 571 (722)
++||||+.++.+..+..... ..+++..+..++.||+.||.|||+.|++||||||+||+++. ++.++|+|||++.
T Consensus 85 ~lv~e~~~~~~l~~~~~~~~----~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~--~~~~kl~dfg~~~ 158 (292)
T cd06644 85 WIMIEFCPGGAVDAIMLELD----RGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTL--DGDIKLADFGVSA 158 (292)
T ss_pred EEEEecCCCCcHHHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcC--CCCEEEccCccce
Confidence 99999998765443322211 12889999999999999999999999999999999999985 7889999999876
Q ss_pred cccCC---ccccccCCcccCchhhc-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHH
Q 004954 572 FQTDN---LCLYVQSRSYRAPEVII-----GLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEM 643 (722)
Q Consensus 572 ~~~~~---~~~~~gt~~y~APE~l~-----~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~ 643 (722)
..... .....+++.|+|||.+. ...++.++|+|||||++|+|++|.+||...+....+.++.....+
T Consensus 159 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~----- 233 (292)
T cd06644 159 KNVKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPP----- 233 (292)
T ss_pred eccccccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcCCCc-----
Confidence 53322 22346788999999985 345788999999999999999999999776554443333211000
Q ss_pred HhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCCC
Q 004954 644 LMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 720 (722)
Q Consensus 644 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~~ 720 (722)
..+. ....+..+.+||++||+.||++||++.++|+||||+.
T Consensus 234 -----------------------------~~~~-------~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 274 (292)
T cd06644 234 -----------------------------TLSQ-------PSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSS 274 (292)
T ss_pred -----------------------------cCCC-------CcccCHHHHHHHHHHhcCCcccCcCHHHHhcCccccc
Confidence 0000 0112356889999999999999999999999999975
No 167
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=5.6e-36 Score=325.99 Aligned_cols=279 Identities=31% Similarity=0.564 Sum_probs=217.9
Q ss_pred ecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec
Q 004954 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 488 (722)
Q Consensus 412 l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~---~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~ 488 (722)
+.++|.+.+.||+|+||.||++.+..+|+.||+|++.... .......+|+.+++.++ |+||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~------h~~iv~~~~~~~~~ 88 (345)
T cd07877 15 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK------HENVIGLLDVFTPA 88 (345)
T ss_pred ccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcC------CCcccceeeeeeec
Confidence 4588999999999999999999999999999999986532 22345667777777774 78999999988643
Q ss_pred ------CeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeE
Q 004954 489 ------EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI 562 (722)
Q Consensus 489 ------~~l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~v 562 (722)
...++++++++++|.+.+... .+++..++.++.||+.||+|||+.||+||||||+||+++. ++.+
T Consensus 89 ~~~~~~~~~~lv~~~~~~~L~~~~~~~-------~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~--~~~~ 159 (345)
T cd07877 89 RSLEEFNDVYLVTHLMGADLNNIVKCQ-------KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DCEL 159 (345)
T ss_pred ccccccccEEEEehhcccCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcC--CCCE
Confidence 347899999987877665421 2889999999999999999999999999999999999996 7789
Q ss_pred EEEecCCcccccCCccccccCCcccCchhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcH
Q 004954 563 KIIDLGSSCFQTDNLCLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDL 641 (722)
Q Consensus 563 kL~DFGls~~~~~~~~~~~gt~~y~APE~l~~-~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~ 641 (722)
+|+|||++...........+++.|+|||.+.+ ..++.++|||||||++|+|++|+.||...+....+..+....+..+.
T Consensus 160 kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 239 (345)
T cd07877 160 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 239 (345)
T ss_pred EEecccccccccccccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCH
Confidence 99999998876655555678899999999876 46888999999999999999999999988777777788777776665
Q ss_pred HHHhhhhhhh--hhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCC
Q 004954 642 EMLMQGQEIY--KYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQ 719 (722)
Q Consensus 642 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~ 719 (722)
..+....... .++. .+ ..+|. ..........+..+.+||.+||+.||.+|||+.++|+||||+
T Consensus 240 ~~~~~~~~~~~~~~~~-------------~~-~~~~~-~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~ 304 (345)
T cd07877 240 ELLKKISSESARNYIQ-------------SL-TQMPK-MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 304 (345)
T ss_pred HHHhhcccHhHHHHHH-------------Hh-cccCC-cchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhh
Confidence 5543321110 0000 00 00111 011111123456789999999999999999999999999998
Q ss_pred C
Q 004954 720 H 720 (722)
Q Consensus 720 ~ 720 (722)
+
T Consensus 305 ~ 305 (345)
T cd07877 305 Q 305 (345)
T ss_pred h
Confidence 5
No 168
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=2.9e-36 Score=315.99 Aligned_cols=274 Identities=33% Similarity=0.535 Sum_probs=219.0
Q ss_pred EEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchh---hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEE
Q 004954 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF 492 (722)
Q Consensus 416 Y~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~---~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~ 492 (722)
|++.+.||+|++|.||++.+..+++.+++|.+..... ......+|+.+++.++ |+||+++++++......+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~~ 74 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELN------HPNIIKLLDVFRHKGDLY 74 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhc------CCCcchHHHhhccCCCEE
Confidence 5778899999999999999999999999999865432 3456677888888775 679999999999999999
Q ss_pred EEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCccc
Q 004954 493 IVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF 572 (722)
Q Consensus 493 iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~ 572 (722)
+||||+.+++...+.... ..+++..+..++.||+.||.|||+.+|+|+||+|+||+++. ++.++|+|||.+..
T Consensus 75 ~v~e~~~~~l~~~l~~~~-----~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~--~~~~~l~df~~~~~ 147 (283)
T cd05118 75 LVFEFMDTDLYKLIKDRQ-----RGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINT--EGVLKLADFGLARS 147 (283)
T ss_pred EEEeccCCCHHHHHHhhc-----ccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECC--CCcEEEeeeeeeEe
Confidence 999999998888776533 23889999999999999999999999999999999999995 78899999998866
Q ss_pred ccCCc---cccccCCcccCchhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhh
Q 004954 573 QTDNL---CLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQ 648 (722)
Q Consensus 573 ~~~~~---~~~~gt~~y~APE~l~~~-~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~ 648 (722)
..... ....++..|+|||.+.+. .++.++|+||||+++|+|++|+.||+..+..+.+..+...++.+....+....
T Consensus 148 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (283)
T cd05118 148 FGSPVRPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFT 227 (283)
T ss_pred cCCCcccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccch
Confidence 54432 224567889999999876 78899999999999999999999999988888888887777766655554433
Q ss_pred hhhhhhcccccchhhhhccccccccCCc--cchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCC
Q 004954 649 EIYKYFTKEYDLYYINEETNQLEYIIPE--ESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 718 (722)
Q Consensus 649 ~~~~~~~~~~~~~~~~~~~~~~~~~ip~--~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf 718 (722)
........ .++. ...........+..+.+||.+||+.||.+||++.++|.||||
T Consensus 228 ~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~ 283 (283)
T cd05118 228 SLARNYKF----------------SFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF 283 (283)
T ss_pred hhhhhhhh----------------hhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence 22111100 0000 001111122346789999999999999999999999999997
No 169
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=7.3e-36 Score=313.60 Aligned_cols=277 Identities=30% Similarity=0.460 Sum_probs=214.1
Q ss_pred EEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchh---hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCe--
Q 004954 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH-- 490 (722)
Q Consensus 416 Y~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~---~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~-- 490 (722)
|++.+.||+|+||.||++++..+++.+|+|+++.... ......+|+.+++.+.. ..|+||+++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~---~~h~~i~~~~~~~~~~~~~~ 77 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLES---FEHPNIVRLLDVCHGPRTDR 77 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhc---cCCCCcceEEEEEeeccCCC
Confidence 6889999999999999999988899999999874322 22345578888887763 358999999999998876
Q ss_pred ---EEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEec
Q 004954 491 ---LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDL 567 (722)
Q Consensus 491 ---l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DF 567 (722)
.+++|||+.+++.+++..... ..+++..++.++.|++.||.|||+.+++|+||+|+||+++. ++.++|+||
T Consensus 78 ~~~~~l~~e~~~~~l~~~l~~~~~----~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~--~~~~~l~df 151 (287)
T cd07838 78 ELKLTLVFEHVDQDLATYLSKCPK----PGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTS--DGQVKIADF 151 (287)
T ss_pred CceeEEEehhcccCHHHHHHHccC----CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEcc--CCCEEEecc
Confidence 999999999888887764332 13889999999999999999999999999999999999996 688999999
Q ss_pred CCcccccCC--ccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHh
Q 004954 568 GSSCFQTDN--LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLM 645 (722)
Q Consensus 568 Gls~~~~~~--~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~ 645 (722)
|.+...... .....+++.|+|||++.+..++.++|+|||||++|+|++|.+||......+.+.++....+......+.
T Consensus 152 g~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (287)
T cd07838 152 GLARIYSFEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWP 231 (287)
T ss_pred CcceeccCCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcC
Confidence 998765433 223457888999999999999999999999999999999999999988888888877655443322221
Q ss_pred hhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCC
Q 004954 646 QGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 718 (722)
Q Consensus 646 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf 718 (722)
....... .......+ ..........+..+.+||.+||+.||.+||++.++|+||||
T Consensus 232 ~~~~~~~---------------~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~~ 287 (287)
T cd07838 232 RNVSLPR---------------SSFPSYTP--RSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPYF 287 (287)
T ss_pred CCcccch---------------hhcccccc--cchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcCcCC
Confidence 1100000 00000000 00011112234668899999999999999999999999998
No 170
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=9.5e-36 Score=307.98 Aligned_cols=249 Identities=23% Similarity=0.357 Sum_probs=199.3
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec-Ce
Q 004954 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL-EH 490 (722)
Q Consensus 415 rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~---~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~-~~ 490 (722)
+|++++.||+|++|.||++.+..+++.+|+|.+.... ...+...+|+.+++.++ |+|++++++.+... ..
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~ 74 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLK------HPNIVAYRESWEGEDGL 74 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCC------CCCeeeeeeeecCCCCE
Confidence 5899999999999999999999999999999986532 23345666777777664 67999999988744 46
Q ss_pred EEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCC
Q 004954 491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS 569 (722)
Q Consensus 491 l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGl 569 (722)
+++||||+.+ ++.+.+.... ...+++.+++.++.|++.||.+||+.||+|+||||+||+++. ++.++|+|||+
T Consensus 75 ~~lv~e~~~~~~l~~~l~~~~----~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~--~~~~~l~df~~ 148 (257)
T cd08223 75 LYIVMGFCEGGDLYHKLKEQK----GKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTR--TNIIKVGDLGI 148 (257)
T ss_pred EEEEecccCCCcHHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEec--CCcEEEecccc
Confidence 8999999975 6766665422 123889999999999999999999999999999999999985 78899999999
Q ss_pred cccccCC---ccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhh
Q 004954 570 SCFQTDN---LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQ 646 (722)
Q Consensus 570 s~~~~~~---~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~ 646 (722)
+...... .....+++.|+|||++.+..++.++|+||||+++|+|++|+.||...+.......+.....
T Consensus 149 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~--------- 219 (257)
T cd08223 149 ARVLENQCDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKL--------- 219 (257)
T ss_pred eEEecccCCccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCC---------
Confidence 8755332 2334678899999999999999999999999999999999999987655444333321100
Q ss_pred hhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCC
Q 004954 647 GQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 718 (722)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf 718 (722)
...+ ...+..+.+||.+||+.||.+|||+.++|+||||
T Consensus 220 -------------------------~~~~---------~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 257 (257)
T cd08223 220 -------------------------PPMP---------KDYSPELGELIATMLSKRPEKRPSVKSILRQPYI 257 (257)
T ss_pred -------------------------CCCc---------cccCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 0000 1234568899999999999999999999999997
No 171
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=7.4e-36 Score=322.83 Aligned_cols=279 Identities=34% Similarity=0.552 Sum_probs=217.3
Q ss_pred cEEEEEEeccCCCCceEEEEECCC--CcEEEEEEeecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec-
Q 004954 415 RYYVTEYLGSAAFSKVFQAQDLHT--GVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL- 488 (722)
Q Consensus 415 rY~i~~~LG~G~fG~Vy~a~d~~t--g~~vAvKil~~~---~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~- 488 (722)
+|++.+.||+|+||.||++.+..+ +..+|+|++... ........+|+.+++.++ .||||+++++.+...
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~-----~h~~iv~~~~~~~~~~ 75 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFR-----GHKNITCLYDMDIVFP 75 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhc-----CCCChheeeeeeeecc
Confidence 589999999999999999999888 899999998642 222345678888888874 378999999875433
Q ss_pred ---CeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEE
Q 004954 489 ---EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKII 565 (722)
Q Consensus 489 ---~~l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~ 565 (722)
...+++|+|+.++|...+.... .+++..++.++.||+.||.|||+.||+||||||+||+++. ++.++|+
T Consensus 76 ~~~~~~~~~~e~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~--~~~~kl~ 147 (332)
T cd07857 76 GNFNELYLYEELMEADLHQIIRSGQ------PLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNA--DCELKIC 147 (332)
T ss_pred ccCCcEEEEEecccCCHHHHHhcCC------CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcC--CCCEEeC
Confidence 4688999999988887775322 3889999999999999999999999999999999999986 7789999
Q ss_pred ecCCcccccCC-------ccccccCCcccCchhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcC
Q 004954 566 DLGSSCFQTDN-------LCLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLG 637 (722)
Q Consensus 566 DFGls~~~~~~-------~~~~~gt~~y~APE~l~~-~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg 637 (722)
|||++...... .....+++.|+|||.+.+ ..++.++|||||||++|+|++|.+||...+....+..++..+|
T Consensus 148 Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~ 227 (332)
T cd07857 148 DFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLG 227 (332)
T ss_pred cCCCceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhC
Confidence 99998754321 123467899999998866 4689999999999999999999999999888899999999999
Q ss_pred CCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCC
Q 004954 638 PIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPW 717 (722)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPw 717 (722)
.++.+.+......... .... .. ...+ ...+.......+..+.+||.+||+.||++|||+.+++.|||
T Consensus 228 ~~~~~~~~~~~~~~~~-------~~~~----~~-~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~ 294 (332)
T cd07857 228 TPDEETLSRIGSPKAQ-------NYIR----SL-PNIP-KKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPY 294 (332)
T ss_pred CCCHHHHHhhhhhhHH-------HHHH----hc-cccC-CcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChh
Confidence 8777655443211100 0000 00 0000 01111112223567999999999999999999999999999
Q ss_pred CC
Q 004954 718 LQ 719 (722)
Q Consensus 718 f~ 719 (722)
|+
T Consensus 295 ~~ 296 (332)
T cd07857 295 LA 296 (332)
T ss_pred hh
Confidence 96
No 172
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=3.9e-36 Score=315.67 Aligned_cols=256 Identities=28% Similarity=0.395 Sum_probs=199.0
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~--~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (722)
++|++.+.||+|+||.||++++..+|+.||+|+++... ....+...|+.++.+. ..||||+++++++......
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~-----~~~~~iv~~~~~~~~~~~~ 75 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRS-----VDCPYTVTFYGALFREGDV 75 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHH-----cCCCCeeeeeEEEecCCcE
Confidence 46999999999999999999999999999999987542 2223444555543332 3588999999999999999
Q ss_pred EEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHC-CCccccCCCCceEEcccCCCeEEEEecCCc
Q 004954 492 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL-GIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (722)
Q Consensus 492 ~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~-gIvHrDLKp~NILl~~~~~~~vkL~DFGls 570 (722)
++||||++++|.+++...... ...+++..++.++.||+.||+|||++ +++||||||+||+++. ++.+||+|||++
T Consensus 76 ~lv~e~~~~~l~~~l~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~--~~~~kl~dfg~~ 151 (283)
T cd06617 76 WICMEVMDTSLDKFYKKVYDK--GLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINR--NGQVKLCDFGIS 151 (283)
T ss_pred EEEhhhhcccHHHHHHHhccC--CCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECC--CCCEEEeecccc
Confidence 999999999888877643322 23489999999999999999999997 9999999999999986 788999999998
Q ss_pred ccccCCc--cccccCCcccCchhhcC----CCCCchhhHHHHHHHHHHHHhCCCCCCCCh-HHHHHHHHHhhcCCCcHHH
Q 004954 571 CFQTDNL--CLYVQSRSYRAPEVIIG----LPYDQKIDLWSLGCILAELWTGEVLFPNDA-VVMILARIIGMLGPIDLEM 643 (722)
Q Consensus 571 ~~~~~~~--~~~~gt~~y~APE~l~~----~~~s~ksDIWSLGviL~elltG~~PF~~~~-~~e~l~~i~~~lg~~~~~~ 643 (722)
....... ....++..|+|||.+.+ ..++.++|+|||||++|+|++|+.||.... ..+.+..+...
T Consensus 152 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~-------- 223 (283)
T cd06617 152 GYLVDSVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEE-------- 223 (283)
T ss_pred cccccccccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhc--------
Confidence 7654322 22467889999999865 456889999999999999999999996421 11222111100
Q ss_pred HhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCCC
Q 004954 644 LMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 720 (722)
Q Consensus 644 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~~ 720 (722)
....+|. ...+..+.+||.+||..+|.+|||+.++++||||++
T Consensus 224 --------------------------~~~~~~~--------~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 266 (283)
T cd06617 224 --------------------------PSPQLPA--------EKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFEL 266 (283)
T ss_pred --------------------------CCCCCCc--------cccCHHHHHHHHHHccCChhhCcCHHHHhcCchhhh
Confidence 0000110 012466899999999999999999999999999975
No 173
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=3.1e-36 Score=357.11 Aligned_cols=261 Identities=26% Similarity=0.365 Sum_probs=204.5
Q ss_pred CceecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEE
Q 004954 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYF 485 (722)
Q Consensus 409 ~~~l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~---~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f 485 (722)
++...++|++++.||+|+||+||++++..+++.+|+|++... ......+..|+.+++.++ ||||++++++|
T Consensus 8 ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~------HPNIVrl~d~f 81 (1021)
T PTZ00266 8 GESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELK------HKNIVRYIDRF 81 (1021)
T ss_pred CccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcC------CCCcCeEEEEE
Confidence 456678999999999999999999999999999999998743 234456778899888885 68999999998
Q ss_pred Eec--CeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHC-------CCccccCCCCceEEc
Q 004954 486 YHL--EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL-------GIIHCDLKPENILIK 555 (722)
Q Consensus 486 ~~~--~~l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~-------gIvHrDLKp~NILl~ 555 (722)
... ..++|||||+.+ +|.+++...... ...+++..++.|+.||+.||.|||+. +||||||||+||||+
T Consensus 82 ~de~~~~lyIVMEY~~gGSL~~lL~k~~~~--~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~ 159 (1021)
T PTZ00266 82 LNKANQKLYILMEFCDAGDLSRNIQKCYKM--FGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLS 159 (1021)
T ss_pred EecCCCEEEEEEeCCCCCcHHHHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEee
Confidence 654 579999999984 777777643221 12389999999999999999999985 499999999999996
Q ss_pred cc---------------CCCeEEEEecCCcccccCC--ccccccCCcccCchhhcC--CCCCchhhHHHHHHHHHHHHhC
Q 004954 556 SY---------------QRCEIKIIDLGSSCFQTDN--LCLYVQSRSYRAPEVIIG--LPYDQKIDLWSLGCILAELWTG 616 (722)
Q Consensus 556 ~~---------------~~~~vkL~DFGls~~~~~~--~~~~~gt~~y~APE~l~~--~~~s~ksDIWSLGviL~elltG 616 (722)
.. ....+||+|||++...... .....+|+.|+|||++.+ ..++.++||||||||||+|++|
T Consensus 160 s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTG 239 (1021)
T PTZ00266 160 TGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSG 239 (1021)
T ss_pred cCccccccccccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHC
Confidence 41 2345999999998765432 233578999999999865 4588999999999999999999
Q ss_pred CCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHH
Q 004954 617 EVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVR 696 (722)
Q Consensus 617 ~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~ 696 (722)
..||........+...+... ..+|. ...+..+.+||.
T Consensus 240 k~PF~~~~~~~qli~~lk~~-----------------------------------p~lpi--------~~~S~eL~dLI~ 276 (1021)
T PTZ00266 240 KTPFHKANNFSQLISELKRG-----------------------------------PDLPI--------KGKSKELNILIK 276 (1021)
T ss_pred CCCCCcCCcHHHHHHHHhcC-----------------------------------CCCCc--------CCCCHHHHHHHH
Confidence 99997654332222211000 00000 112456889999
Q ss_pred HhcccCCCCCcCHHHHHhCCCCCC
Q 004954 697 TLLEINPQRRPTAREALDHPWLQH 720 (722)
Q Consensus 697 ~mL~~dP~kRpTa~ElL~HPwf~~ 720 (722)
.||+.+|.+||++.|+|.||||+.
T Consensus 277 ~~L~~dPeeRPSa~QlL~h~~ik~ 300 (1021)
T PTZ00266 277 NLLNLSAKERPSALQCLGYQIIKN 300 (1021)
T ss_pred HHhcCChhHCcCHHHHhccHHHhh
Confidence 999999999999999999999964
No 174
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=5.1e-36 Score=321.02 Aligned_cols=254 Identities=26% Similarity=0.366 Sum_probs=204.7
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchh----hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD----FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~----~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (722)
++|++.+.||+|++|+||++.+..+++.+|+|.+..... ....+..|+++++.+. |+||+++++.+....
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~ 74 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLD------HPFLPTLYASFQTET 74 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCC------CCCchhheeeeecCC
Confidence 479999999999999999999999999999999876432 3345667777777764 789999999999999
Q ss_pred eEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecC
Q 004954 490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (722)
Q Consensus 490 ~l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFG 568 (722)
..++||||+.+ +|.+++.... ...+++..++.++.|++.||+|||+.|++|+||||+||+++. ++.++|+|||
T Consensus 75 ~~~lv~e~~~~~~L~~~~~~~~----~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~--~~~~~l~dfg 148 (316)
T cd05574 75 YLCLVMDYCPGGELFRLLQRQP----GKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHE--SGHIMLSDFD 148 (316)
T ss_pred EEEEEEEecCCCCHHHHHHhCC----CCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcC--CCCEEEeecc
Confidence 99999999975 6766654321 223899999999999999999999999999999999999996 7789999999
Q ss_pred CcccccCC--------------------------------ccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhC
Q 004954 569 SSCFQTDN--------------------------------LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616 (722)
Q Consensus 569 ls~~~~~~--------------------------------~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG 616 (722)
++...... .....|+..|+|||++.+..++.++||||||+++|+|++|
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g 228 (316)
T cd05574 149 LSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYG 228 (316)
T ss_pred hhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhC
Confidence 87543211 1123578889999999998899999999999999999999
Q ss_pred CCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHH
Q 004954 617 EVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVR 696 (722)
Q Consensus 617 ~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~ 696 (722)
..||.+.+....+..+..... ..+.. ...+..+.++|+
T Consensus 229 ~~pf~~~~~~~~~~~~~~~~~-----------------------------------~~~~~-------~~~~~~~~~li~ 266 (316)
T cd05574 229 TTPFKGSNRDETFSNILKKEV-----------------------------------TFPGS-------PPVSSSARDLIR 266 (316)
T ss_pred CCCCCCCchHHHHHHHhcCCc-----------------------------------cCCCc-------cccCHHHHHHHH
Confidence 999987765554444321100 00110 013467899999
Q ss_pred HhcccCCCCCcC----HHHHHhCCCCCCC
Q 004954 697 TLLEINPQRRPT----AREALDHPWLQHP 721 (722)
Q Consensus 697 ~mL~~dP~kRpT----a~ElL~HPwf~~~ 721 (722)
+||+.||++||| ++|+|+||||+..
T Consensus 267 ~~l~~~p~~R~s~~~~~~~ll~~~~~~~~ 295 (316)
T cd05574 267 KLLVKDPSKRLGSKRGAAEIKQHPFFRGV 295 (316)
T ss_pred HHccCCHhHCCCchhhHHHHHcCchhhcC
Confidence 999999999999 9999999999763
No 175
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=4.1e-36 Score=315.51 Aligned_cols=276 Identities=32% Similarity=0.529 Sum_probs=219.2
Q ss_pred EEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchh--hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEE
Q 004954 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD--FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFI 493 (722)
Q Consensus 416 Y~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~--~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~i 493 (722)
|++.+.||+|++|+||+|++..+++.+|||.+..... ......+|+..++.++ .|+||+++++++...+..++
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~-----~h~~i~~~~~~~~~~~~~~l 75 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLN-----EHPNIVKLKEVFRENDELYF 75 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhcc-----CCCCchhHHHHhhcCCcEEE
Confidence 6789999999999999999988999999999865432 1223345666665553 27899999999999999999
Q ss_pred EEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCcccc
Q 004954 494 VCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQ 573 (722)
Q Consensus 494 VmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~ 573 (722)
||||+.+++.+.+.... ...+++..+..++.|++.+|.|||++|++|+||+|+||+++. ++.++|+|||.+...
T Consensus 76 v~e~~~~~l~~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~--~~~~~l~d~~~~~~~ 149 (283)
T cd07830 76 VFEYMEGNLYQLMKDRK----GKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSG--PEVVKIADFGLAREI 149 (283)
T ss_pred EEecCCCCHHHHHHhcc----cccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcC--CCCEEEeecccceec
Confidence 99999888888776543 123889999999999999999999999999999999999996 789999999998765
Q ss_pred cCC--ccccccCCcccCchhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhh
Q 004954 574 TDN--LCLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEI 650 (722)
Q Consensus 574 ~~~--~~~~~gt~~y~APE~l~~-~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~~~ 650 (722)
... .....++..|+|||++.. ..++.++|+||||+++|+|++|++||+.....+.+..+...++.++.+.+.....+
T Consensus 150 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (283)
T cd07830 150 RSRPPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKL 229 (283)
T ss_pred cCCCCcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhh
Confidence 432 233567889999998854 45789999999999999999999999999888888899888888887766554433
Q ss_pred hhhhcccccchhhhhccccccccCCcc--chhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCC
Q 004954 651 YKYFTKEYDLYYINEETNQLEYIIPEE--SSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 718 (722)
Q Consensus 651 ~~~~~~~~~~~~~~~~~~~~~~~ip~~--~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf 718 (722)
...... .++.. ..+.......+..+.+||++||+.+|++|||+.|++.||||
T Consensus 230 ~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~ 283 (283)
T cd07830 230 ASKLGF----------------RFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF 283 (283)
T ss_pred hccccc----------------cccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence 322110 11110 01111222235679999999999999999999999999997
No 176
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=6.8e-36 Score=311.15 Aligned_cols=256 Identities=27% Similarity=0.407 Sum_probs=203.3
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC---
Q 004954 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE--- 489 (722)
Q Consensus 413 ~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~--- 489 (722)
.++|++.+.||+|++|.||+|.+..+++.+++|++.......+.+.+|+.+++.+. .|+||+++++++....
T Consensus 5 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~-----~h~~i~~~~~~~~~~~~~~ 79 (275)
T cd06608 5 TGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYS-----NHPNIATFYGAFIKKNPPG 79 (275)
T ss_pred hhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhc-----CCCChheEEEEEEecCCCC
Confidence 47899999999999999999999989999999999876665677888999998874 3789999999997654
Q ss_pred ---eEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEE
Q 004954 490 ---HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKII 565 (722)
Q Consensus 490 ---~l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~ 565 (722)
..++||||+.+ +|.+++..... ....+++..++.++.|++.||.|||+.|++|+||+|+||+++. ++.++|+
T Consensus 80 ~~~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~--~~~~~l~ 155 (275)
T cd06608 80 NDDQLWLVMELCGGGSVTDLVKGLRK--KGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTK--NAEVKLV 155 (275)
T ss_pred cceEEEEEEEcCCCCcHHHHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEcc--CCeEEEC
Confidence 48999999986 66666554321 1223889999999999999999999999999999999999986 7889999
Q ss_pred ecCCcccccCC---ccccccCCcccCchhhcC-----CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcC
Q 004954 566 DLGSSCFQTDN---LCLYVQSRSYRAPEVIIG-----LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLG 637 (722)
Q Consensus 566 DFGls~~~~~~---~~~~~gt~~y~APE~l~~-----~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg 637 (722)
|||++...... .....+++.|+|||++.. ..++.++|||||||++|+|++|..||........+.++....
T Consensus 156 d~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~- 234 (275)
T cd06608 156 DFGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNP- 234 (275)
T ss_pred CCccceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhccC-
Confidence 99988654332 223467889999999854 346788999999999999999999997654443333322100
Q ss_pred CCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCC
Q 004954 638 PIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPW 717 (722)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPw 717 (722)
. ..+.. ....+..+.+||.+||..||++|||+.++++|||
T Consensus 235 -~--------------------------------~~~~~-------~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~ 274 (275)
T cd06608 235 -P--------------------------------PTLKS-------PENWSKKFNDFISECLIKNYEQRPFMEELLEHPF 274 (275)
T ss_pred -C--------------------------------CCCCc-------hhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCC
Confidence 0 00000 0112356889999999999999999999999999
Q ss_pred C
Q 004954 718 L 718 (722)
Q Consensus 718 f 718 (722)
+
T Consensus 275 ~ 275 (275)
T cd06608 275 I 275 (275)
T ss_pred C
Confidence 7
No 177
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=1.4e-35 Score=313.67 Aligned_cols=258 Identities=25% Similarity=0.364 Sum_probs=202.0
Q ss_pred ecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec---
Q 004954 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL--- 488 (722)
Q Consensus 412 l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~--- 488 (722)
..++|.+.+.||+|+||.||++.+..+++.+|+|++...........+|+.+++.+. .||||+++++++...
T Consensus 20 ~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~-----~h~ni~~~~~~~~~~~~~ 94 (291)
T cd06639 20 PTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLP-----NHPNVVKFYGMFYKADKL 94 (291)
T ss_pred CCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhc-----CCCCeEEEEEEEEecccc
Confidence 468899999999999999999999999999999998765444456677888887774 378999999998754
Q ss_pred --CeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEE
Q 004954 489 --EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKII 565 (722)
Q Consensus 489 --~~l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~ 565 (722)
...++||||+.+ +|.+++...... ...+++..++.++.|++.||.|||+.|++|+||||+||+++. ++.++|+
T Consensus 95 ~~~~~~lv~ey~~~~sL~~~~~~~~~~--~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~--~~~~kl~ 170 (291)
T cd06639 95 VGGQLWLVLELCNGGSVTELVKGLLIC--GQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTT--EGGVKLV 170 (291)
T ss_pred CCCeeEEEEEECCCCcHHHHHHHhhhc--CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcC--CCCEEEe
Confidence 368999999975 666666532211 223889999999999999999999999999999999999986 7789999
Q ss_pred ecCCcccccCC---ccccccCCcccCchhhcCC-----CCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcC
Q 004954 566 DLGSSCFQTDN---LCLYVQSRSYRAPEVIIGL-----PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLG 637 (722)
Q Consensus 566 DFGls~~~~~~---~~~~~gt~~y~APE~l~~~-----~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg 637 (722)
|||++...... .....++..|+|||++... .++.++|||||||++|+|++|+.||........+..+....
T Consensus 171 dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~- 249 (291)
T cd06639 171 DFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNP- 249 (291)
T ss_pred ecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcCC-
Confidence 99988754322 2234678899999998643 36789999999999999999999997765444333322100
Q ss_pred CCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCC
Q 004954 638 PIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPW 717 (722)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPw 717 (722)
.+ ....+ ......+.+||.+||+.+|++||++.|+|+|||
T Consensus 250 -~~------------------------------~~~~~---------~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~ 289 (291)
T cd06639 250 -PP------------------------------TLLHP---------EKWCRSFNHFISQCLIKDFEARPSVTHLLEHPF 289 (291)
T ss_pred -CC------------------------------CCCcc---------cccCHHHHHHHHHHhhcChhhCcCHHHHhcCcc
Confidence 00 00000 112346889999999999999999999999999
Q ss_pred CC
Q 004954 718 LQ 719 (722)
Q Consensus 718 f~ 719 (722)
|+
T Consensus 290 ~~ 291 (291)
T cd06639 290 IK 291 (291)
T ss_pred cC
Confidence 96
No 178
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=4.5e-36 Score=314.39 Aligned_cols=275 Identities=33% Similarity=0.515 Sum_probs=222.3
Q ss_pred EEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEE
Q 004954 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF 492 (722)
Q Consensus 416 Y~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~---~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~ 492 (722)
|++.+.||+|++|.||+|++..+++.+|+|++... .........|+.+++.++ |+||+++++++...+..+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~------~~~i~~~~~~~~~~~~~~ 74 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELK------HPNIVKLLDVIHTERKLY 74 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcC------CCCHHHHHhhhhcCCceE
Confidence 67788999999999999999999999999998764 233455667888888775 689999999999999999
Q ss_pred EEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCccc
Q 004954 493 IVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF 572 (722)
Q Consensus 493 iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~ 572 (722)
+||||++++|.+++.... ..+++..+..++.|++.||+|||+.||+|+||+|+||+++. ++.++|+|||.+..
T Consensus 75 ~v~e~~~~~l~~~i~~~~-----~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~--~~~~~l~d~g~~~~ 147 (282)
T cd07829 75 LVFEYCDMDLKKYLDKRP-----GPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINR--DGVLKLADFGLARA 147 (282)
T ss_pred EEecCcCcCHHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcC--CCCEEEecCCcccc
Confidence 999999998888877542 23899999999999999999999999999999999999996 78899999999876
Q ss_pred ccCCc---cccccCCcccCchhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhh
Q 004954 573 QTDNL---CLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQ 648 (722)
Q Consensus 573 ~~~~~---~~~~gt~~y~APE~l~~~-~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~ 648 (722)
..... .....+..|+|||.+.+. .++.++|+|||||++|+|++|.+||......+.+.++....+.++..++....
T Consensus 148 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (282)
T cd07829 148 FGIPLRTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVT 227 (282)
T ss_pred cCCCccccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhc
Confidence 54332 223457789999999876 78999999999999999999999999998888888998888888777766554
Q ss_pred hhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCC
Q 004954 649 EIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 718 (722)
Q Consensus 649 ~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf 718 (722)
... ++....... + ...........+..+.++|++||+.||++||++.+++.||||
T Consensus 228 ~~~-~~~~~~~~~-------------~-~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~ 282 (282)
T cd07829 228 KLP-DYKPTFPKF-------------P-PKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF 282 (282)
T ss_pred ccc-ccccccccc-------------C-ccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence 433 111111000 0 001111122235679999999999999999999999999998
No 179
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=5.6e-36 Score=309.19 Aligned_cols=250 Identities=29% Similarity=0.460 Sum_probs=203.7
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEE
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFI 493 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~i 493 (722)
++|++.+.||+|+||.||++.+..+++.+++|.+..... ...+.+|+++++.+ .|+||+++++.+....+.++
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~e~~~~~~l------~~~~i~~~~~~~~~~~~~~l 75 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED-LQEIIKEISILKQC------DSPYIVKYYGSYFKNTDLWI 75 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH-HHHHHHHHHHHHhC------CCCcEeeeeeeeecCCcEEE
Confidence 579999999999999999999988899999999976654 56788888888887 37899999999999999999
Q ss_pred EEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCccc
Q 004954 494 VCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF 572 (722)
Q Consensus 494 VmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~ 572 (722)
++||+.+ +|.+++.... ..+++..++.++.|++.||.|||+.+++|+||+|+||+++. ++.++|+|||++..
T Consensus 76 ~~e~~~~~~L~~~l~~~~-----~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~--~~~~~l~dfg~~~~ 148 (256)
T cd06612 76 VMEYCGAGSVSDIMKITN-----KTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNE--EGQAKLADFGVSGQ 148 (256)
T ss_pred EEecCCCCcHHHHHHhCc-----cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECC--CCcEEEcccccchh
Confidence 9999986 5666654322 23889999999999999999999999999999999999996 77899999999876
Q ss_pred ccCCc---cccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhh
Q 004954 573 QTDNL---CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQE 649 (722)
Q Consensus 573 ~~~~~---~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~~ 649 (722)
..... ....++..|+|||++.+..++.++||||||+++|+|++|+.||...........+...
T Consensus 149 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~-------------- 214 (256)
T cd06612 149 LTDTMAKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNK-------------- 214 (256)
T ss_pred cccCccccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccC--------------
Confidence 54432 2345788999999999999999999999999999999999999765443322111100
Q ss_pred hhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCC
Q 004954 650 IYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 718 (722)
Q Consensus 650 ~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf 718 (722)
...... .....+..+.+||.+||+.||.+|||+.|+|+||||
T Consensus 215 --------------------~~~~~~-------~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~~~~ 256 (256)
T cd06612 215 --------------------PPPTLS-------DPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQHPFI 256 (256)
T ss_pred --------------------CCCCCC-------chhhcCHHHHHHHHHHHhcChhhCcCHHHHhcCCCC
Confidence 000000 011123568899999999999999999999999997
No 180
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=3.6e-36 Score=316.10 Aligned_cols=253 Identities=30% Similarity=0.441 Sum_probs=203.1
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch-hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEE
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF 492 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~-~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~ 492 (722)
++|++++.||.|+||.||++.+..+++.+|+|++.... .....+.+|+.+++.++ |+||+++++.+......+
T Consensus 5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~~~ 78 (280)
T cd06611 5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECK------HPNIVGLYEAYFYENKLW 78 (280)
T ss_pred hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCC------CCceeEEEEEEecCCeEE
Confidence 57999999999999999999998899999999987543 33456778888888775 679999999999999999
Q ss_pred EEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCcc
Q 004954 493 IVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 571 (722)
Q Consensus 493 iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~ 571 (722)
+||||+++ +|.+++.... ..+++..++.++.|++.||.|||+.||+|+||+|+||+++. ++.++|+|||++.
T Consensus 79 lv~e~~~~~~L~~~~~~~~-----~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~--~~~~~l~d~g~~~ 151 (280)
T cd06611 79 ILIEFCDGGALDSIMLELE-----RGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTL--DGDVKLADFGVSA 151 (280)
T ss_pred EEeeccCCCcHHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECC--CCCEEEccCccch
Confidence 99999986 5555544322 23899999999999999999999999999999999999985 7889999999876
Q ss_pred cccCC---ccccccCCcccCchhhc-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHH
Q 004954 572 FQTDN---LCLYVQSRSYRAPEVII-----GLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEM 643 (722)
Q Consensus 572 ~~~~~---~~~~~gt~~y~APE~l~-----~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~ 643 (722)
..... .....+++.|+|||.+. ...++.++|+||||+++|+|++|+.||........+..+..... +
T Consensus 152 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--~--- 226 (280)
T cd06611 152 KNKSTLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEP--P--- 226 (280)
T ss_pred hhcccccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCCC--C---
Confidence 54322 23356889999999985 34577899999999999999999999987655544433321100 0
Q ss_pred HhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCCC
Q 004954 644 LMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 720 (722)
Q Consensus 644 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~~ 720 (722)
.... ....+..+.+||.+||+.+|.+||++.++|+||||.+
T Consensus 227 ---------------------------~~~~---------~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~ 267 (280)
T cd06611 227 ---------------------------TLDQ---------PSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSD 267 (280)
T ss_pred ---------------------------CcCC---------cccCCHHHHHHHHHHhccChhhCcCHHHHhcChhhcc
Confidence 0000 0122356889999999999999999999999999976
No 181
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=9.6e-36 Score=316.81 Aligned_cols=252 Identities=28% Similarity=0.457 Sum_probs=202.2
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch-hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 004954 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (722)
Q Consensus 413 ~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~-~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (722)
..+|++.+.||+|++|.||++.+..+++.+|+|.+.... .....+.+|+.+++.+. |+||+++++.+....+.
T Consensus 19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~------h~~v~~~~~~~~~~~~~ 92 (296)
T cd06654 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENK------NPNIVNYLDSYLVGDEL 92 (296)
T ss_pred ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCC------CCCEeeEEEEEEeCCEE
Confidence 468999999999999999999999999999999887543 23355667888777664 78999999999999999
Q ss_pred EEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCc
Q 004954 492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (722)
Q Consensus 492 ~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 570 (722)
++||||+.+ +|.+++... .++..++..++.|++.||+|||+.||+|+||||+||+++. ++.++|+|||++
T Consensus 93 ~lv~e~~~~~~L~~~~~~~-------~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~--~~~~kl~dfg~~ 163 (296)
T cd06654 93 WVVMEYLAGGSLTDVVTET-------CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM--DGSVKLTDFGFC 163 (296)
T ss_pred EEeecccCCCCHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcC--CCCEEECccccc
Confidence 999999975 566655321 2788899999999999999999999999999999999985 778999999988
Q ss_pred ccccCC---ccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 004954 571 CFQTDN---LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 647 (722)
Q Consensus 571 ~~~~~~---~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~ 647 (722)
...... .....+++.|+|||.+.+..++.++|||||||++|+|++|+.||........+..+... +.
T Consensus 164 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~-~~--------- 233 (296)
T cd06654 164 AQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN-GT--------- 233 (296)
T ss_pred hhccccccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcC-CC---------
Confidence 654322 22346788999999999888999999999999999999999999776543322221100 00
Q ss_pred hhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCCC
Q 004954 648 QEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 720 (722)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~~ 720 (722)
..++ .....+..+.+||.+||..+|.+|||+.++++||||..
T Consensus 234 ------------------------~~~~-------~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~~~~ 275 (296)
T cd06654 234 ------------------------PELQ-------NPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKI 275 (296)
T ss_pred ------------------------CCCC-------CccccCHHHHHHHHHHCcCCcccCcCHHHHhhChhhhc
Confidence 0000 01122356889999999999999999999999999964
No 182
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=1e-35 Score=313.37 Aligned_cols=257 Identities=25% Similarity=0.384 Sum_probs=200.6
Q ss_pred ecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEE-----
Q 004954 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY----- 486 (722)
Q Consensus 412 l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~----- 486 (722)
..++|++.+.||+|+||.||++++..+++.+|+|++.........+.+|+.+++.+. .|+||+++++++.
T Consensus 16 ~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~-----~h~~i~~~~~~~~~~~~~ 90 (286)
T cd06638 16 PSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALS-----DHPNVVKFYGMYYKKDVK 90 (286)
T ss_pred cccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHh-----cCCCeeeeeeeeeecccC
Confidence 467999999999999999999999999999999998765444456778888888885 3789999999884
Q ss_pred ecCeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEE
Q 004954 487 HLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKII 565 (722)
Q Consensus 487 ~~~~l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~ 565 (722)
.....++||||+++ +|.+++..... ....+++..++.++.|++.||.|||+.+|+||||||+||+++. ++.++|+
T Consensus 91 ~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~--~~~~kl~ 166 (286)
T cd06638 91 NGDQLWLVLELCNGGSVTDLVKGFLK--RGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTT--EGGVKLV 166 (286)
T ss_pred CCCeEEEEEeecCCCCHHHHHHHhhc--cCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECC--CCCEEEc
Confidence 34578999999975 56665543221 1234888999999999999999999999999999999999996 6779999
Q ss_pred ecCCcccccCC---ccccccCCcccCchhhc-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcC
Q 004954 566 DLGSSCFQTDN---LCLYVQSRSYRAPEVII-----GLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLG 637 (722)
Q Consensus 566 DFGls~~~~~~---~~~~~gt~~y~APE~l~-----~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg 637 (722)
|||++...... .....+++.|+|||++. +..++.++|||||||++|+|++|+.||........+..+....
T Consensus 167 dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~- 245 (286)
T cd06638 167 DFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRNP- 245 (286)
T ss_pred cCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhccccC-
Confidence 99998754432 22346889999999975 3457889999999999999999999997654333222111000
Q ss_pred CCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCC
Q 004954 638 PIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPW 717 (722)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPw 717 (722)
...... ....+..+.+||.+||+.||++|||+.|||+|||
T Consensus 246 -------------------------------~~~~~~---------~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~ 285 (286)
T cd06638 246 -------------------------------PPTLHQ---------PELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVF 285 (286)
T ss_pred -------------------------------CCcccC---------CCCcCHHHHHHHHHHccCCcccCCCHHHHhhccc
Confidence 000000 0112356889999999999999999999999999
Q ss_pred C
Q 004954 718 L 718 (722)
Q Consensus 718 f 718 (722)
|
T Consensus 286 ~ 286 (286)
T cd06638 286 I 286 (286)
T ss_pred C
Confidence 7
No 183
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=5.2e-36 Score=319.01 Aligned_cols=252 Identities=30% Similarity=0.483 Sum_probs=200.7
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch-hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 004954 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (722)
Q Consensus 413 ~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~-~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (722)
..+|++.+.||+|+||.||++.+..+++.||+|.+.... .....+.+|+.+++.+ .|+||+++++.+...++.
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~------~h~~i~~~~~~~~~~~~~ 91 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMREN------KNPNIVNYLDSYLVGDEL 91 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhC------CCCCEeeEEEEEecCCEE
Confidence 478999999999999999999999999999999987532 2334556777777765 478999999999999999
Q ss_pred EEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCc
Q 004954 492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (722)
Q Consensus 492 ~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 570 (722)
++||||+++ +|.+++.. ..+++..+..++.|++.||.|||+.|++|+||||+|||++. ++.++|+|||++
T Consensus 92 ~lv~e~~~~~~L~~~~~~-------~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~--~~~~~l~Dfg~~ 162 (297)
T cd06656 92 WVVMEYLAGGSLTDVVTE-------TCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGM--DGSVKLTDFGFC 162 (297)
T ss_pred EEeecccCCCCHHHHHHh-------CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC--CCCEEECcCccc
Confidence 999999975 55555532 12788899999999999999999999999999999999985 788999999988
Q ss_pred ccccCC---ccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 004954 571 CFQTDN---LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 647 (722)
Q Consensus 571 ~~~~~~---~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~ 647 (722)
...... .....+++.|+|||.+.+..++.++|+|||||++|+|++|..||...+....+..+.. .+
T Consensus 163 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~-~~---------- 231 (297)
T cd06656 163 AQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT-NG---------- 231 (297)
T ss_pred eEccCCccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeecc-CC----------
Confidence 654332 2234678899999999998899999999999999999999999976543221111100 00
Q ss_pred hhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCCC
Q 004954 648 QEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 720 (722)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~~ 720 (722)
.|. ...+...+..+.+||.+||+.+|.+||++.++|+||||+.
T Consensus 232 --------------------------~~~----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~ 274 (297)
T cd06656 232 --------------------------TPE----LQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKL 274 (297)
T ss_pred --------------------------CCC----CCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhcc
Confidence 000 0001123466889999999999999999999999999974
No 184
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=1.2e-35 Score=307.34 Aligned_cols=249 Identities=22% Similarity=0.368 Sum_probs=203.6
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 004954 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (722)
Q Consensus 415 rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~---~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (722)
+|++.+.||+|+||.||++++..+|+.+|+|.+... ......+.+|+.+++.++ |+||+++++++...++.
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~ 74 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMK------HPNIVQYQESFEENGNL 74 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCC------CCCeeeeEeeecCCCeE
Confidence 689999999999999999999999999999998643 233346677888877774 68999999999999999
Q ss_pred EEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCc
Q 004954 492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (722)
Q Consensus 492 ~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 570 (722)
++||||+.+ +|.+.+..... ..+++..++.++.|++.||.|||++|++|+||+|+||+++. ++.++|+|||++
T Consensus 75 ~lv~e~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~--~~~~~l~d~~~~ 148 (256)
T cd08218 75 YIVMDYCEGGDLYKKINAQRG----VLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTK--DGTIKLGDFGIA 148 (256)
T ss_pred EEEEecCCCCcHHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcC--CCCEEEeeccce
Confidence 999999975 67776653221 22788899999999999999999999999999999999986 778999999998
Q ss_pred ccccCCc---cccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 004954 571 CFQTDNL---CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 647 (722)
Q Consensus 571 ~~~~~~~---~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~ 647 (722)
....... ....+++.|+|||++.+..++.++|+|||||++|+|++|..||......+....+.... .
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~--~-------- 218 (256)
T cd08218 149 RVLNSTVELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGS--Y-------- 218 (256)
T ss_pred eecCcchhhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCC--C--------
Confidence 7654332 22457888999999998889999999999999999999999998766655554443110 0
Q ss_pred hhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCC
Q 004954 648 QEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 718 (722)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf 718 (722)
... ....+..+.++|.+||+.+|.+||++.++|+||||
T Consensus 219 ------------------------~~~---------~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~~~~ 256 (256)
T cd08218 219 ------------------------PPV---------SSHYSYDLRNLVSQLFKRNPRDRPSVNSILEKNFI 256 (256)
T ss_pred ------------------------CCC---------cccCCHHHHHHHHHHhhCChhhCcCHHHHhhCcCC
Confidence 000 11234668999999999999999999999999998
No 185
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=1.4e-35 Score=307.68 Aligned_cols=256 Identities=27% Similarity=0.400 Sum_probs=203.4
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~--~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (722)
++|++.+.||.|+||+||++.+..++..+|+|++.... ...+.+.+|+.+++.++ |+||+++++.+...+..
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~ 74 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCN------HPNVVKYYTSFVVGDEL 74 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcC------CCCEEEEEEEEeeCCEE
Confidence 47999999999999999999998899999999986532 24466778888877664 67999999999999999
Q ss_pred EEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCc
Q 004954 492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (722)
Q Consensus 492 ~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 570 (722)
++|||++.+ .|.+++..... ...+++..++.++.||+.||+|||+.|++|+||+|+||+++. ++.++|+|||++
T Consensus 75 ~iv~e~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~--~~~~~l~df~~~ 149 (267)
T cd06610 75 WLVMPYLSGGSLLDIMKSSYP---RGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGE--DGSVKIADFGVS 149 (267)
T ss_pred EEEEeccCCCcHHHHHHHhcc---cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcC--CCCEEEcccchH
Confidence 999999975 56666654322 123889999999999999999999999999999999999996 678999999988
Q ss_pred ccccCCc-------cccccCCcccCchhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHH
Q 004954 571 CFQTDNL-------CLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLE 642 (722)
Q Consensus 571 ~~~~~~~-------~~~~gt~~y~APE~l~~~-~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~ 642 (722)
....... ....++..|+|||++... .++.++|+|||||++|+|++|+.||...+....+.++..... +
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~--~-- 225 (267)
T cd06610 150 ASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDP--P-- 225 (267)
T ss_pred HHhccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcCCC--C--
Confidence 6544322 224678899999998876 788999999999999999999999977655444433321100 0
Q ss_pred HHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCC
Q 004954 643 MLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 718 (722)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf 718 (722)
..+.. ......++.+.+||.+||+.||++|||+.++|+||||
T Consensus 226 ------------------------------~~~~~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~ 267 (267)
T cd06610 226 ------------------------------SLETG----ADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF 267 (267)
T ss_pred ------------------------------CcCCc----cccccccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence 00000 0011234668899999999999999999999999998
No 186
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=7e-36 Score=314.49 Aligned_cols=252 Identities=32% Similarity=0.462 Sum_probs=200.0
Q ss_pred EEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch-hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEE
Q 004954 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIV 494 (722)
Q Consensus 416 Y~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~-~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~iV 494 (722)
|++.+.||+|+||.||++.+..++..+++|.+.... .....+.+|+++++.+. |+||+++++.+......++|
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~------h~~ii~~~~~~~~~~~~~~v 80 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCD------HPNIVKLLDAFYYENNLWIL 80 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCC------CCCeeeEEEEEeeCCEEEEE
Confidence 678899999999999999999999999999986532 33455677888877764 78999999999999999999
Q ss_pred EEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCccccc
Q 004954 495 CELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT 574 (722)
Q Consensus 495 mEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~ 574 (722)
|||+.++.+..+.... ...+++..+..++.|++.||.|||+.|++||||||+||+++. ++.++|+|||++....
T Consensus 81 ~e~~~~~~l~~~~~~~----~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~--~~~~kl~dfg~~~~~~ 154 (282)
T cd06643 81 IEFCAGGAVDAVMLEL----ERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTL--DGDIKLADFGVSAKNT 154 (282)
T ss_pred EEecCCCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcc--CCCEEEcccccccccc
Confidence 9999875544332221 123889999999999999999999999999999999999986 7789999999986543
Q ss_pred CC---ccccccCCcccCchhhc-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhh
Q 004954 575 DN---LCLYVQSRSYRAPEVII-----GLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQ 646 (722)
Q Consensus 575 ~~---~~~~~gt~~y~APE~l~-----~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~ 646 (722)
.. .....+++.|+|||++. +..++.++|||||||++|+|++|++||...+.......+.....+
T Consensus 155 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~-------- 226 (282)
T cd06643 155 RTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPP-------- 226 (282)
T ss_pred ccccccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCC--------
Confidence 32 22356789999999984 445788999999999999999999999876655544443211100
Q ss_pred hhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCCC
Q 004954 647 GQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 720 (722)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~~ 720 (722)
.++ .....+..+.+||++||+.||.+|||+.++++||||+.
T Consensus 227 --------------------------~~~-------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 267 (282)
T cd06643 227 --------------------------TLA-------QPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTV 267 (282)
T ss_pred --------------------------CCC-------CccccCHHHHHHHHHHccCChhhCcCHHHHhcCCCEec
Confidence 000 00112356889999999999999999999999999974
No 187
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-37 Score=313.47 Aligned_cols=260 Identities=29% Similarity=0.428 Sum_probs=206.2
Q ss_pred ecCcEEEEE-EeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec--
Q 004954 412 IAGRYYVTE-YLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL-- 488 (722)
Q Consensus 412 l~~rY~i~~-~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~-- 488 (722)
+.++|+|.. +||-|-.|+|..+.++.||+++|+|++... .+..+|+++..... .|||||.++++|...
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds----~KARrEVeLHw~~s-----~h~~iV~IidVyeNs~~ 129 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS----PKARREVELHWMAS-----GHPHIVSIIDVYENSYQ 129 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC----HHHHhHhhhhhhhc-----CCCceEEeehhhhhhcc
Confidence 456777764 699999999999999999999999998654 45678888877765 589999999998743
Q ss_pred --CeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcc-cCCCeEEE
Q 004954 489 --EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKS-YQRCEIKI 564 (722)
Q Consensus 489 --~~l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~-~~~~~vkL 564 (722)
..+.||||.|+| .|+..+... +...+++.++..|++||+.|+.|||+.+|.||||||+|+|.+. ..+..+||
T Consensus 130 ~rkcLLiVmE~meGGeLfsriq~~----g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKL 205 (400)
T KOG0604|consen 130 GRKCLLIVMECMEGGELFSRIQDR----GDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKL 205 (400)
T ss_pred CceeeEeeeecccchHHHHHHHHc----ccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEe
Confidence 578999999986 466655532 3455999999999999999999999999999999999999975 34678999
Q ss_pred EecCCccccc--CCccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHH
Q 004954 565 IDLGSSCFQT--DNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLE 642 (722)
Q Consensus 565 ~DFGls~~~~--~~~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~ 642 (722)
+|||+|+... ....+.+.||.|.|||++-..+|+...|+|||||++|-||+|.+||..+.... ++..
T Consensus 206 tDfGFAK~t~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~a-----------ispg 274 (400)
T KOG0604|consen 206 TDFGFAKETQEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA-----------ISPG 274 (400)
T ss_pred cccccccccCCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCcc-----------CChh
Confidence 9999998766 33556788999999999999999999999999999999999999996543211 1111
Q ss_pred HHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCCC
Q 004954 643 MLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 720 (722)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~~ 720 (722)
|- . ......+.+|.... + ..+++.+++|+++|..+|++|.|+.+++.|||+.+
T Consensus 275 Mk------------------~--rI~~gqy~FP~pEW-s----~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~ 327 (400)
T KOG0604|consen 275 MK------------------R--RIRTGQYEFPEPEW-S----CVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQ 327 (400)
T ss_pred HH------------------h--HhhccCccCCChhH-h----HHHHHHHHHHHHHhcCCchhheeHHHhhcCchhcc
Confidence 10 0 11122333332110 0 12466889999999999999999999999999964
No 188
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1e-36 Score=330.04 Aligned_cols=254 Identities=29% Similarity=0.427 Sum_probs=197.9
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEee---cchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 004954 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK---NDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (722)
Q Consensus 413 ~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~---~~~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (722)
+..|+++++||+||.++||++... ..+.+|+|.+. .+....+-+.+|+.+|.+|+. |.+|+++|++-..++
T Consensus 360 g~~Yeilk~iG~GGSSkV~kV~~s-~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg-----~~~IIqL~DYEv~d~ 433 (677)
T KOG0596|consen 360 GREYEILKQIGSGGSSKVFKVLNS-DKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKG-----HDKIIQLYDYEVTDG 433 (677)
T ss_pred cchhhHHHhhcCCCcceeeeeecC-CCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcC-----CceEEEEeeeeccCc
Confidence 456999999999999999999854 34556666543 244556778999999999985 459999999999999
Q ss_pred eEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCC
Q 004954 490 HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS 569 (722)
Q Consensus 490 ~l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGl 569 (722)
.+||||||-+.+|-..+...... .+.-.++.+..||+.|+.++|+.||||.||||.|+|+. .|.+||+|||.
T Consensus 434 ~lYmvmE~Gd~DL~kiL~k~~~~-----~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlV---kG~LKLIDFGI 505 (677)
T KOG0596|consen 434 YLYMVMECGDIDLNKILKKKKSI-----DPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLV---KGRLKLIDFGI 505 (677)
T ss_pred eEEEEeecccccHHHHHHhccCC-----CchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEE---eeeEEeeeech
Confidence 99999999888888887755432 33347889999999999999999999999999999998 79999999999
Q ss_pred cccccCCcc-----ccccCCcccCchhhcCC-----------CCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHH
Q 004954 570 SCFQTDNLC-----LYVQSRSYRAPEVIIGL-----------PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARII 633 (722)
Q Consensus 570 s~~~~~~~~-----~~~gt~~y~APE~l~~~-----------~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~ 633 (722)
|.......+ ..+||+.||+||.+... +.++++||||||||||+|+.|+.||..-. ..++++.
T Consensus 506 A~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~--n~~aKl~ 583 (677)
T KOG0596|consen 506 ANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQII--NQIAKLH 583 (677)
T ss_pred hcccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHH--HHHHHHH
Confidence 976554432 36899999999998633 26689999999999999999999995432 1222222
Q ss_pred hhcCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHH
Q 004954 634 GMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREAL 713 (722)
Q Consensus 634 ~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL 713 (722)
+...| ..+..+|.... .-+++++++.||.+||.+|||..+||
T Consensus 584 aI~~P------------------------------~~~Iefp~~~~--------~~~li~~mK~CL~rdPkkR~si~eLL 625 (677)
T KOG0596|consen 584 AITDP------------------------------NHEIEFPDIPE--------NDELIDVMKCCLARDPKKRWSIPELL 625 (677)
T ss_pred hhcCC------------------------------CccccccCCCC--------chHHHHHHHHHHhcCcccCCCcHHHh
Confidence 11110 01111222111 12288999999999999999999999
Q ss_pred hCCCCCC
Q 004954 714 DHPWLQH 720 (722)
Q Consensus 714 ~HPwf~~ 720 (722)
+|||++-
T Consensus 626 qhpFl~~ 632 (677)
T KOG0596|consen 626 QHPFLQI 632 (677)
T ss_pred cCccccc
Confidence 9999974
No 189
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=2.9e-35 Score=304.57 Aligned_cols=249 Identities=28% Similarity=0.420 Sum_probs=206.3
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 004954 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (722)
Q Consensus 415 rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~---~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (722)
+|++++.||.|+||.||.+++..+++.+++|.+... ......+.+|+.+++.++ |+||+++++++...+.+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~------h~~i~~~~~~~~~~~~~ 74 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQ------HPNIIAYYNHFMDDNTL 74 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCC------CCCeeEEEeEEecCCeE
Confidence 699999999999999999999999999999987643 333456778888888774 67999999999999999
Q ss_pred EEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCc
Q 004954 492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (722)
Q Consensus 492 ~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 570 (722)
++||||+.+ +|.+.+.... ...+++..+..++.|++.+|.|||+.|++|+||+|+||+++. ++.+||+|||++
T Consensus 75 ~~~~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~--~~~~kl~d~~~~ 148 (256)
T cd08221 75 LIEMEYANGGTLYDKIVRQK----GQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTK--AGLIKLGDFGIS 148 (256)
T ss_pred EEEEEecCCCcHHHHHHhcc----ccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeC--CCCEEECcCcce
Confidence 999999975 7777665432 123889999999999999999999999999999999999986 778999999998
Q ss_pred ccccCCc---cccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 004954 571 CFQTDNL---CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 647 (722)
Q Consensus 571 ~~~~~~~---~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~ 647 (722)
....... ....+++.|+|||.+.+..++.++|+||||+++|+|++|..||...+..+....+... ..+
T Consensus 149 ~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~--~~~------- 219 (256)
T cd08221 149 KILGSEYSMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQG--NYT------- 219 (256)
T ss_pred EEcccccccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcC--CCC-------
Confidence 7654432 3356889999999999888899999999999999999999999887666655554311 000
Q ss_pred hhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCC
Q 004954 648 QEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 718 (722)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf 718 (722)
.. ....+..+.++|.+||..+|.+||++.++|+|||+
T Consensus 220 -------------------------~~---------~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~~l 256 (256)
T cd08221 220 -------------------------PV---------VSVYSSELISLVHSLLQQDPEKRPTADEVLDQPLL 256 (256)
T ss_pred -------------------------CC---------ccccCHHHHHHHHHHcccCcccCCCHHHHhhCcCC
Confidence 00 01224568899999999999999999999999997
No 190
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.7e-35 Score=315.09 Aligned_cols=252 Identities=30% Similarity=0.481 Sum_probs=202.4
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch-hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 004954 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (722)
Q Consensus 413 ~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~-~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (722)
..+|++.+.||.|++|.||++.+..+++.||+|.+.... .....+.+|+.+++.++ |+||+++++.+......
T Consensus 18 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~------h~~iv~~~~~~~~~~~~ 91 (296)
T cd06655 18 KKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELK------NPNIVNFLDSFLVGDEL 91 (296)
T ss_pred cceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcC------CCceeeeeeeEecCceE
Confidence 357999999999999999999999999999999886532 23355667788777764 78999999999999999
Q ss_pred EEEEEccccc-hHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCc
Q 004954 492 FIVCELLRAN-LYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (722)
Q Consensus 492 ~iVmEy~~gs-Ll~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 570 (722)
++||||+.++ |..++.. ..+++.++..++.|++.||.|||+.|++|+||||+||+++. ++.++|+|||++
T Consensus 92 ~lv~e~~~~~~L~~~~~~-------~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~--~~~~kl~dfg~~ 162 (296)
T cd06655 92 FVVMEYLAGGSLTDVVTE-------TCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGM--DGSVKLTDFGFC 162 (296)
T ss_pred EEEEEecCCCcHHHHHHh-------cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC--CCCEEEccCccc
Confidence 9999999864 4444432 12889999999999999999999999999999999999985 788999999987
Q ss_pred ccccCC---ccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 004954 571 CFQTDN---LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 647 (722)
Q Consensus 571 ~~~~~~---~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~ 647 (722)
...... .....+++.|+|||.+.+..++.++|+|||||++|+|++|..||...+....+..+... +. +
T Consensus 163 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~-~~-~------- 233 (296)
T cd06655 163 AQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN-GT-P------- 233 (296)
T ss_pred hhcccccccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc-CC-c-------
Confidence 654332 22346788999999999888999999999999999999999999876554433222110 00 0
Q ss_pred hhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCCC
Q 004954 648 QEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 720 (722)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~~ 720 (722)
.+ ......+..+.+||++||..||.+|||+.++++||||+.
T Consensus 234 -------------------------~~-------~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~ 274 (296)
T cd06655 234 -------------------------EL-------QNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKL 274 (296)
T ss_pred -------------------------cc-------CCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhChHhhh
Confidence 00 001123456889999999999999999999999999975
No 191
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=9.1e-36 Score=312.03 Aligned_cols=251 Identities=29% Similarity=0.425 Sum_probs=205.3
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~--~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (722)
++|++.+.||.|++|.||++++..+++.+|+|++.... .....+.+|+.+++.++ |+||+++++.+......
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~~ 74 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCR------SPYITKYYGSFLKGSKL 74 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcC------CCCeeeeeEEEEECCeE
Confidence 47899999999999999999999999999999987543 23345667888887775 68999999999999999
Q ss_pred EEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCc
Q 004954 492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (722)
Q Consensus 492 ~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 570 (722)
++|+||+.+ +|.+.+... .+++..++.++.|++.||.|||+.+++|+||+|+||+++. ++.++|+|||++
T Consensus 75 ~~v~e~~~~~~L~~~~~~~-------~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~--~~~~~l~d~g~~ 145 (274)
T cd06609 75 WIIMEYCGGGSCLDLLKPG-------KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSE--EGDVKLADFGVS 145 (274)
T ss_pred EEEEEeeCCCcHHHHHhhc-------CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECC--CCCEEEcccccc
Confidence 999999975 676666532 3889999999999999999999999999999999999996 788999999998
Q ss_pred ccccCC---ccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 004954 571 CFQTDN---LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 647 (722)
Q Consensus 571 ~~~~~~---~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~ 647 (722)
...... .....+++.|+|||.+.+..++.++||||||+++|+|++|..||...+.......+....
T Consensus 146 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~----------- 214 (274)
T cd06609 146 GQLTSTMSKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNN----------- 214 (274)
T ss_pred eeecccccccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhcC-----------
Confidence 765533 234567888999999999889999999999999999999999997665443333222110
Q ss_pred hhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCCCC
Q 004954 648 QEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQHP 721 (722)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~~~ 721 (722)
...++.. ..++.+.++|.+||..+|++|||++++++||||++.
T Consensus 215 -----------------------~~~~~~~--------~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~~~~~ 257 (274)
T cd06609 215 -----------------------PPSLEGN--------KFSKPFKDFVSLCLNKDPKERPSAKELLKHKFIKKA 257 (274)
T ss_pred -----------------------CCCCccc--------ccCHHHHHHHHHHhhCChhhCcCHHHHhhChhhcCC
Confidence 0000100 034568899999999999999999999999999763
No 192
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=1.3e-35 Score=308.97 Aligned_cols=247 Identities=31% Similarity=0.455 Sum_probs=198.1
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchh----------hhHhHHHHHHHHHHhcccCCCCCCceeEEEEE
Q 004954 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD----------FFDQSLDEIKLLKLVNKNDPADEHHILRLYDY 484 (722)
Q Consensus 415 rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~----------~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~ 484 (722)
+|.+.+.||.|++|.||+|.+..+++.+|+|.+..... ....+.+|+.+++.++ ||||++++++
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~ 74 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQ------HENIVQYLGS 74 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcC------CCCeeeEEEE
Confidence 57888999999999999999988999999998864321 1234566777777774 7899999999
Q ss_pred EEecCeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEE
Q 004954 485 FYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIK 563 (722)
Q Consensus 485 f~~~~~l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vk 563 (722)
+...+..++||||+++ +|.+++.... .+++..+..++.|++.||+|||+.|++||||+|+||+++. ++.++
T Consensus 75 ~~~~~~~~lv~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~--~~~~~ 146 (267)
T cd06628 75 SLDADHLNIFLEYVPGGSVAALLNNYG------AFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDN--KGGIK 146 (267)
T ss_pred EEeCCccEEEEEecCCCCHHHHHHhcc------CccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcC--CCCEE
Confidence 9999999999999975 6666665322 2788899999999999999999999999999999999985 78899
Q ss_pred EEecCCcccccCC---------ccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHh
Q 004954 564 IIDLGSSCFQTDN---------LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIG 634 (722)
Q Consensus 564 L~DFGls~~~~~~---------~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~ 634 (722)
|+|||.+...... .....+++.|+|||.+.+..++.++|+|||||++|+|++|+.||...+....+..+..
T Consensus 147 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~ 226 (267)
T cd06628 147 ISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGE 226 (267)
T ss_pred ecccCCCcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhc
Confidence 9999988655421 1123578889999999988899999999999999999999999987544333322211
Q ss_pred hcCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHh
Q 004954 635 MLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 714 (722)
Q Consensus 635 ~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~ 714 (722)
. ....+| ...+..+.++|++||+.||.+||++.++++
T Consensus 227 ~----------------------------------~~~~~~---------~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 227 N----------------------------------ASPEIP---------SNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred c----------------------------------CCCcCC---------cccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 0 000111 123466889999999999999999999999
Q ss_pred CCCC
Q 004954 715 HPWL 718 (722)
Q Consensus 715 HPwf 718 (722)
||||
T Consensus 264 ~~~~ 267 (267)
T cd06628 264 HPFL 267 (267)
T ss_pred CCCC
Confidence 9997
No 193
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-38 Score=322.40 Aligned_cols=252 Identities=24% Similarity=0.412 Sum_probs=211.1
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEE
Q 004954 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIV 494 (722)
Q Consensus 415 rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~iV 494 (722)
-|.|+++||+|+||.||+|.++.+|+.+|||.+..+.+ .+.+..|+.|++++.. +++|++|+.|.....++||
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~sD-LQEIIKEISIMQQC~S------~yVVKYYGSYFK~sDLWIV 106 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDTD-LQEIIKEISIMQQCKS------KYVVKYYGSYFKHSDLWIV 106 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccch-HHHHHHHHHHHHHcCC------chhhhhhhhhccCCceEee
Confidence 47788899999999999999999999999999987764 4678889999988864 6999999999999999999
Q ss_pred EEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCcccc
Q 004954 495 CELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQ 573 (722)
Q Consensus 495 mEy~~-gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~ 573 (722)
||||+ |+.-+.++.+... +++.++..+++..++||+|||...-||||||..|||++. +|..||+|||.+.++
T Consensus 107 MEYCGAGSiSDI~R~R~K~-----L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT--~G~AKLADFGVAGQL 179 (502)
T KOG0574|consen 107 MEYCGAGSISDIMRARRKP-----LSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNT--DGIAKLADFGVAGQL 179 (502)
T ss_pred hhhcCCCcHHHHHHHhcCC-----ccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcc--cchhhhhhccccchh
Confidence 99998 6777777765443 999999999999999999999999999999999999996 899999999999887
Q ss_pred cCC---ccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhh
Q 004954 574 TDN---LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEI 650 (722)
Q Consensus 574 ~~~---~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~~~ 650 (722)
.+. ..+..|||.|||||++..-.|..++||||||++..||..|++||.+-.+.-.+..| ...
T Consensus 180 TDTMAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMI---PT~------------ 244 (502)
T KOG0574|consen 180 TDTMAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMI---PTK------------ 244 (502)
T ss_pred hhhHHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEec---cCC------------
Confidence 765 45678999999999999999999999999999999999999999764332111111 000
Q ss_pred hhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCCCC
Q 004954 651 YKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQHP 721 (722)
Q Consensus 651 ~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~~~ 721 (722)
.|+.. ..+...+.+|.|||+.||...|++|.||.++++|||++++
T Consensus 245 -----------------------PPPTF---~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~FiknA 289 (502)
T KOG0574|consen 245 -----------------------PPPTF---KKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEHTFIKNA 289 (502)
T ss_pred -----------------------CCCCC---CChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhhhhcCC
Confidence 01100 0111223568999999999999999999999999999864
No 194
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=2.2e-35 Score=304.75 Aligned_cols=250 Identities=26% Similarity=0.383 Sum_probs=203.5
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 004954 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (722)
Q Consensus 415 rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~---~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (722)
+|++.+.||+|+||.||++.+..+++.+|+|.+.... .....+.+|+.+++.++ ||||+++++.+...+..
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~------~~~i~~~~~~~~~~~~~ 74 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLS------HPNIIEYYENFLEDKAL 74 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCC------CCchhheeeeEecCCEE
Confidence 5899999999999999999999999999999986532 23456677888888774 68999999999999999
Q ss_pred EEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCc
Q 004954 492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (722)
Q Consensus 492 ~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 570 (722)
++||||+.+ +|.+++.... ...+++..+..++.|++.+|.|||++|++|+||+|+||+++. .+..++|+|||.+
T Consensus 75 ~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~-~~~~~~l~d~~~~ 149 (256)
T cd08220 75 MIVMEYAPGGTLAEYIQKRC----NSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDK-HKMVVKIGDFGIS 149 (256)
T ss_pred EEEEecCCCCCHHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC-CCCEEEEccCCCc
Confidence 999999975 6777765432 123789999999999999999999999999999999999975 3457899999998
Q ss_pred ccccCCc--cccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhh
Q 004954 571 CFQTDNL--CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQ 648 (722)
Q Consensus 571 ~~~~~~~--~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~ 648 (722)
....... ....+++.|+|||.+.+..++.++|+||||+++|+|++|..||...+.......+....
T Consensus 150 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~------------ 217 (256)
T cd08220 150 KILSSKSKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGT------------ 217 (256)
T ss_pred eecCCCccccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcC------------
Confidence 7655432 23567889999999998888999999999999999999999998766554443332100
Q ss_pred hhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCC
Q 004954 649 EIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 718 (722)
Q Consensus 649 ~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf 718 (722)
...++ ...+..+.++|.+||+.+|.+|||+.|+|+||||
T Consensus 218 ----------------------~~~~~---------~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~p~~ 256 (256)
T cd08220 218 ----------------------FAPIS---------DRYSPDLRQLILSMLNLDPSKRPQLSQIMAQPIC 256 (256)
T ss_pred ----------------------CCCCC---------CCcCHHHHHHHHHHccCChhhCCCHHHHhhCCCC
Confidence 00011 1124568899999999999999999999999997
No 195
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=5.5e-36 Score=315.67 Aligned_cols=256 Identities=27% Similarity=0.414 Sum_probs=200.7
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~--~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (722)
++|++++.||+|+||.||++.+..+++.+|+|.++.. ......+.+|+.+++.++ |+||+++++.+...+..
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~------~~~i~~~~~~~~~~~~~ 74 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAV------SPYIVDFYGAFFIEGAV 74 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcC------CCcHHhhhhheecCCeE
Confidence 3689999999999999999999999999999988753 233456778888887764 67999999999999999
Q ss_pred EEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHH-CCCccccCCCCceEEcccCCCeEEEEecCC
Q 004954 492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS-LGIIHCDLKPENILIKSYQRCEIKIIDLGS 569 (722)
Q Consensus 492 ~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs-~gIvHrDLKp~NILl~~~~~~~vkL~DFGl 569 (722)
++||||+.+ +|..++.... ....+++..+..++.||+.||.|||+ .+|+|+||||+||+++. ++.++|+|||.
T Consensus 75 ~lv~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~--~~~~~l~dfg~ 149 (286)
T cd06622 75 YMCMEYMDAGSLDKLYAGGV---ATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNG--NGQVKLCDFGV 149 (286)
T ss_pred EEEEeecCCCCHHHHHHhcc---ccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECC--CCCEEEeecCC
Confidence 999999986 4555544321 12248999999999999999999997 59999999999999996 78899999999
Q ss_pred cccccCC-ccccccCCcccCchhhcCCC------CCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHH
Q 004954 570 SCFQTDN-LCLYVQSRSYRAPEVIIGLP------YDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLE 642 (722)
Q Consensus 570 s~~~~~~-~~~~~gt~~y~APE~l~~~~------~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~ 642 (722)
+...... .....+++.|+|||.+.+.. ++.++|||||||++|+|++|+.||...........+.......
T Consensus 150 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~--- 226 (286)
T cd06622 150 SGNLVASLAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGD--- 226 (286)
T ss_pred cccccCCccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcC---
Confidence 8755332 23346788999999986543 5789999999999999999999997654433332222111000
Q ss_pred HHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCCC
Q 004954 643 MLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 720 (722)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~~ 720 (722)
...+| ...+..+.+||.+||+.+|++||++.+++.||||..
T Consensus 227 ----------------------------~~~~~---------~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~ 267 (286)
T cd06622 227 ----------------------------PPTLP---------SGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVK 267 (286)
T ss_pred ----------------------------CCCCC---------cccCHHHHHHHHHHcccCcccCCCHHHHhcChhhhh
Confidence 00011 113466889999999999999999999999999854
No 196
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-36 Score=343.95 Aligned_cols=246 Identities=28% Similarity=0.451 Sum_probs=202.8
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEee-cchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEE-ec--
Q 004954 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK-NDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY-HL-- 488 (722)
Q Consensus 413 ~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~-~~~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~-~~-- 488 (722)
..+++|.++|.+|||+.||+|++...|..+|+|.+- .+........+|+.+|+.|. .|+|||.+++... ..
T Consensus 36 ~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~-----gh~nIV~yidss~~~~~~ 110 (738)
T KOG1989|consen 36 SHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLS-----GHKNIVSYIDSSAINRSS 110 (738)
T ss_pred CEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhc-----CCCceeeEeccccccccC
Confidence 468999999999999999999998888999999764 46667788999999999997 4789999999432 11
Q ss_pred ----CeEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCC--CccccCCCCceEEcccCCCe
Q 004954 489 ----EHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLG--IIHCDLKPENILIKSYQRCE 561 (722)
Q Consensus 489 ----~~l~iVmEy~~-gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~g--IvHrDLKp~NILl~~~~~~~ 561 (722)
-+++|.||||. |+|.+++..+.... |++.++++|+.++++|+++||.+. |||||||-+||||.. ++.
T Consensus 111 ~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~----lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~--~g~ 184 (738)
T KOG1989|consen 111 NNGVWEVLLLMEYCKGGSLVDFMNTRLQTR----LTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSA--DGN 184 (738)
T ss_pred CCceeEEEeehhhccCCcHHHHHHHHHhcc----CChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcC--CCC
Confidence 35889999999 69999998654433 999999999999999999999998 999999999999996 889
Q ss_pred EEEEecCCcccccCCccc------------cccCCcccCchhh---cCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHH
Q 004954 562 IKIIDLGSSCFQTDNLCL------------YVQSRSYRAPEVI---IGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVV 626 (722)
Q Consensus 562 vkL~DFGls~~~~~~~~~------------~~gt~~y~APE~l---~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~ 626 (722)
+||||||.++........ ..-|+.|+|||++ .+.+++.|+|||+|||+||.|+....||......
T Consensus 185 ~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~l 264 (738)
T KOG1989|consen 185 YKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKL 264 (738)
T ss_pred EEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcce
Confidence 999999998654333211 2348999999997 5788999999999999999999999999765322
Q ss_pred HHHHHHHhhcCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCC
Q 004954 627 MILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRR 706 (722)
Q Consensus 627 e~l~~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kR 706 (722)
.+ ....|.+|.-... ...|++||+.||+.||.+|
T Consensus 265 aI---------------------------------------lng~Y~~P~~p~y-------s~~l~~LI~~mL~~nP~~R 298 (738)
T KOG1989|consen 265 AI---------------------------------------LNGNYSFPPFPNY-------SDRLKDLIRTMLQPNPDER 298 (738)
T ss_pred eE---------------------------------------EeccccCCCCccH-------HHHHHHHHHHHhccCcccC
Confidence 11 1234556654333 3558999999999999999
Q ss_pred cCHHHHHhC
Q 004954 707 PTAREALDH 715 (722)
Q Consensus 707 pTa~ElL~H 715 (722)
|++.+++.+
T Consensus 299 PnI~Qv~~~ 307 (738)
T KOG1989|consen 299 PNIYQVLEE 307 (738)
T ss_pred CCHHHHHHH
Confidence 999999865
No 197
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=2.3e-35 Score=307.14 Aligned_cols=248 Identities=25% Similarity=0.352 Sum_probs=196.3
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch-------hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 004954 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-------DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 487 (722)
Q Consensus 415 rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~-------~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~ 487 (722)
+|++.+.||+|+||+||+|.+ .+++.+|+|.+.... .....+.+|+.+++.++ |+||+++++++..
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~ 73 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLK------HVNIVQYLGTCLD 73 (265)
T ss_pred CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcC------CCCEeeEeeEeec
Confidence 588899999999999999986 578999999886432 12344666777777664 6799999999999
Q ss_pred cCeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEe
Q 004954 488 LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIID 566 (722)
Q Consensus 488 ~~~l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~D 566 (722)
.+..++||||+.+ +|.+++.... .+++..++.++.|++.||+|||+.+|+|+||+|+||+++. ++.++|+|
T Consensus 74 ~~~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~--~~~~~l~d 145 (265)
T cd06631 74 DNTISIFMEFVPGGSISSILNRFG------PLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMP--NGIIKLID 145 (265)
T ss_pred CCeEEEEEecCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECC--CCeEEecc
Confidence 9999999999976 5666654322 2788999999999999999999999999999999999985 78899999
Q ss_pred cCCcccccC---------CccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcC
Q 004954 567 LGSSCFQTD---------NLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLG 637 (722)
Q Consensus 567 FGls~~~~~---------~~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg 637 (722)
||++..... ......++..|+|||++.+..++.++|+|||||++|+|++|..||...+.......+....+
T Consensus 146 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~ 225 (265)
T cd06631 146 FGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRG 225 (265)
T ss_pred chhhHhhhhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccC
Confidence 998765321 12234678899999999998899999999999999999999999976543332222211100
Q ss_pred CCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCC
Q 004954 638 PIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPW 717 (722)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPw 717 (722)
.. ..++ ...+..+.+||++||+.+|.+||++.++|+|||
T Consensus 226 ~~--------------------------------~~~~---------~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~ 264 (265)
T cd06631 226 LM--------------------------------PRLP---------DSFSAAAIDFVTSCLTRDQHERPSALQLLRHDF 264 (265)
T ss_pred CC--------------------------------CCCC---------CCCCHHHHHHHHHHhcCCcccCCCHHHHhcCCC
Confidence 00 0011 123467899999999999999999999999999
Q ss_pred C
Q 004954 718 L 718 (722)
Q Consensus 718 f 718 (722)
|
T Consensus 265 ~ 265 (265)
T cd06631 265 L 265 (265)
T ss_pred C
Confidence 7
No 198
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1.2e-35 Score=309.70 Aligned_cols=252 Identities=27% Similarity=0.408 Sum_probs=196.9
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch-hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 004954 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (722)
Q Consensus 413 ~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~-~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (722)
..+|++.+.||+|+||.||+|++..+++.+|+|++.... .....+.+|+.+++.+ +||||+++++.+...+..
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~------~h~~ii~~~~~~~~~~~~ 81 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKEC------KHCNIVAYFGSYLSREKL 81 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhc------CCCCeeeeeEEEEeCCEE
Confidence 467999999999999999999999999999999987532 2334566788877766 478999999999999999
Q ss_pred EEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCc
Q 004954 492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (722)
Q Consensus 492 ~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 570 (722)
++||||+++ +|.+++.... .+++..+..++.|++.||.|||+.||+||||+|+||+++. ++.++|+|||++
T Consensus 82 ~iv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~--~~~~~l~dfg~~ 153 (267)
T cd06646 82 WICMEYCGGGSLQDIYHVTG------PLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTD--NGDVKLADFGVA 153 (267)
T ss_pred EEEEeCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECC--CCCEEECcCccc
Confidence 999999985 5666654321 2889999999999999999999999999999999999985 778999999998
Q ss_pred ccccCC---ccccccCCcccCchhhc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHH
Q 004954 571 CFQTDN---LCLYVQSRSYRAPEVII---GLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEML 644 (722)
Q Consensus 571 ~~~~~~---~~~~~gt~~y~APE~l~---~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~ 644 (722)
...... .....+++.|+|||.+. ...++.++|+|||||++|+|++|+.||...........+...
T Consensus 154 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~--------- 224 (267)
T cd06646 154 AKITATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKS--------- 224 (267)
T ss_pred eeecccccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecC---------
Confidence 765432 22346788999999985 344778999999999999999999999654322211111000
Q ss_pred hhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCC
Q 004954 645 MQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPW 717 (722)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPw 717 (722)
....+. .. .....+..+.+||++||+.+|++|||++++|+|+|
T Consensus 225 --------------------------~~~~~~---~~-~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l~ 267 (267)
T cd06646 225 --------------------------NFQPPK---LK-DKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHLF 267 (267)
T ss_pred --------------------------CCCCCC---Cc-cccccCHHHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence 000000 00 01123467899999999999999999999999998
No 199
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=9.3e-36 Score=310.01 Aligned_cols=253 Identities=27% Similarity=0.430 Sum_probs=198.8
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch-------hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 004954 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-------DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 487 (722)
Q Consensus 415 rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~-------~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~ 487 (722)
+|++.+.||+|++|.||++.+..+++.+|+|++.... .....+.+|+++++.++ |+||+++++++..
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~iv~~~~~~~~ 74 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLN------HPHIIRMLGATCE 74 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcC------CCceehhhceecc
Confidence 4788899999999999999999999999999987432 12356677888888775 6799999999999
Q ss_pred cCeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEe
Q 004954 488 LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIID 566 (722)
Q Consensus 488 ~~~l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~D 566 (722)
.++.++||||+.+ +|.+++.... .+++..+..++.||+.||.|||++|++|+||+|+||+++. ....++|+|
T Consensus 75 ~~~~~~v~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~-~~~~~~l~d 147 (268)
T cd06630 75 DSHFNLFVEWMAGGSVSHLLSKYG------AFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDS-TGQRLRIAD 147 (268)
T ss_pred CCeEEEEEeccCCCcHHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC-CCCEEEEcc
Confidence 9999999999986 5666554321 3889999999999999999999999999999999999975 234699999
Q ss_pred cCCcccccCCc-------cccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCC
Q 004954 567 LGSSCFQTDNL-------CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPI 639 (722)
Q Consensus 567 FGls~~~~~~~-------~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~ 639 (722)
||.+....... ....++..|+|||.+.+..++.++|+||||+++|+|++|..||...........+....
T Consensus 148 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~--- 224 (268)
T cd06630 148 FGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIA--- 224 (268)
T ss_pred cccccccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHh---
Confidence 99986654321 12457889999999998889999999999999999999999996543222111111000
Q ss_pred cHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCC
Q 004954 640 DLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQ 719 (722)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~ 719 (722)
.......+| ...+..+.++|.+||+.+|.+|||+.++|+||||+
T Consensus 225 ---------------------------~~~~~~~~~---------~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~~~~ 268 (268)
T cd06630 225 ---------------------------SATTAPSIP---------EHLSPGLRDVTLRCLELQPEDRPPSRELLKHPVFR 268 (268)
T ss_pred ---------------------------ccCCCCCCc---------hhhCHHHHHHHHHHcCCCcccCcCHHHHhcCcccC
Confidence 000000011 12346688999999999999999999999999995
No 200
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=6.5e-36 Score=311.63 Aligned_cols=252 Identities=25% Similarity=0.404 Sum_probs=198.0
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch-hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 004954 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (722)
Q Consensus 413 ~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~-~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (722)
.++|++.+.||+|+||.||+|++..+++.+|+|+++... .......+|+.+++.++ ||||+++++.+...+..
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~------h~~ii~~~~~~~~~~~~ 81 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCK------HSNIVAYFGSYLRRDKL 81 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCC------CCCeeeEEEEEEeCCEE
Confidence 357889999999999999999999999999999987643 22344566777777664 78999999999999999
Q ss_pred EEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCc
Q 004954 492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (722)
Q Consensus 492 ~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 570 (722)
++||||+++ +|.+++.... .+++..++.++.|++.||.|||+.|++|+||||+||+++. ++.++|+|||++
T Consensus 82 ~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~--~~~~~l~dfg~~ 153 (267)
T cd06645 82 WICMEFCGGGSLQDIYHVTG------PLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTD--NGHVKLADFGVS 153 (267)
T ss_pred EEEEeccCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECC--CCCEEECcceee
Confidence 999999985 6776665332 2889999999999999999999999999999999999985 778999999998
Q ss_pred ccccCC---ccccccCCcccCchhhc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHH
Q 004954 571 CFQTDN---LCLYVQSRSYRAPEVII---GLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEML 644 (722)
Q Consensus 571 ~~~~~~---~~~~~gt~~y~APE~l~---~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~ 644 (722)
...... .....+++.|+|||++. ...++.++|+|||||++|+|++|..||........+..+... .
T Consensus 154 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~--~------ 225 (267)
T cd06645 154 AQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKS--N------ 225 (267)
T ss_pred eEccCcccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhcc--C------
Confidence 654432 23356889999999974 455888999999999999999999999654432222211100 0
Q ss_pred hhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCC
Q 004954 645 MQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPW 717 (722)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPw 717 (722)
...+.. . .....+..+.+||++||+.+|++|||++++++|||
T Consensus 226 ---------------------------~~~~~~---~-~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~~~ 267 (267)
T cd06645 226 ---------------------------FQPPKL---K-DKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQHPF 267 (267)
T ss_pred ---------------------------CCCCcc---c-ccCCCCHHHHHHHHHHccCCchhCcCHHHHhcCCC
Confidence 000000 0 00112356889999999999999999999999999
No 201
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=1.8e-35 Score=315.98 Aligned_cols=256 Identities=23% Similarity=0.358 Sum_probs=205.1
Q ss_pred ceecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEE
Q 004954 410 TVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYF 485 (722)
Q Consensus 410 ~~l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~----~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f 485 (722)
.....+|++.+.||+|+||+||++++..+++.||+|++.... .....+.+|+.+++.++ ||||+++++++
T Consensus 11 ~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~------h~niv~~~~~~ 84 (307)
T cd06607 11 DDPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLR------HPNTIEYKGCY 84 (307)
T ss_pred CCcchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCC------CCCEEEEEEEE
Confidence 344567999999999999999999999999999999986432 22345667887777764 68999999999
Q ss_pred EecCeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEE
Q 004954 486 YHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKII 565 (722)
Q Consensus 486 ~~~~~l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~ 565 (722)
...+..++||||+.+++.+++..... .+++..+..++.||+.||.|||+.||+|+||+|+||+++. ++.++|+
T Consensus 85 ~~~~~~~lv~e~~~g~l~~~~~~~~~-----~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~--~~~~kL~ 157 (307)
T cd06607 85 LREHTAWLVMEYCLGSASDILEVHKK-----PLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTE--PGTVKLA 157 (307)
T ss_pred EeCCeEEEEHHhhCCCHHHHHHHccc-----CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECC--CCCEEEe
Confidence 99999999999999988887754322 2889999999999999999999999999999999999986 7889999
Q ss_pred ecCCcccccCCccccccCCcccCchhhc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHH
Q 004954 566 DLGSSCFQTDNLCLYVQSRSYRAPEVII---GLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLE 642 (722)
Q Consensus 566 DFGls~~~~~~~~~~~gt~~y~APE~l~---~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~ 642 (722)
|||++...... ....+++.|+|||++. ...++.++||||||+++|+|++|..||.+.+.......+.....
T Consensus 158 dfg~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~----- 231 (307)
T cd06607 158 DFGSASLVSPA-NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDS----- 231 (307)
T ss_pred ecCcceecCCC-CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcCCC-----
Confidence 99998655433 3456788999999974 35578899999999999999999999977654443333221000
Q ss_pred HHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCCCC
Q 004954 643 MLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQHP 721 (722)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~~~ 721 (722)
...+. ...+..+.+||.+||+.+|.+||++.+++.||||+..
T Consensus 232 -----------------------------~~~~~--------~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 273 (307)
T cd06607 232 -----------------------------PTLSS--------NDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLRE 273 (307)
T ss_pred -----------------------------CCCCc--------hhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccc
Confidence 00000 0123568899999999999999999999999999753
No 202
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=4.6e-35 Score=312.52 Aligned_cols=252 Identities=26% Similarity=0.367 Sum_probs=201.6
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~----~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (722)
++|++++.||+|+||.||++.+..+++.||+|.+.... .....+.+|+.+++.++ ||||+++++.+...+
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~------~~~i~~~~~~~~~~~ 74 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAE------NPFVVSMFCSFETKR 74 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCC------CCCeeeeEEEEecCC
Confidence 36899999999999999999999999999999987542 22345567777777654 689999999999999
Q ss_pred eEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecC
Q 004954 490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (722)
Q Consensus 490 ~l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFG 568 (722)
+.++||||+.| +|.+++.... .+++..+..++.|++.||+|||+.|++||||||+||+++. ++.++|+|||
T Consensus 75 ~~~lv~e~~~g~~L~~~l~~~~------~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~--~~~~~l~dfg 146 (305)
T cd05609 75 HLCMVMEYVEGGDCATLLKNIG------ALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITS--MGHIKLTDFG 146 (305)
T ss_pred EEEEEEecCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECC--CCCEEEeeCC
Confidence 99999999986 5666654322 2888999999999999999999999999999999999985 7889999999
Q ss_pred CcccccCC------------------ccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHH
Q 004954 569 SSCFQTDN------------------LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILA 630 (722)
Q Consensus 569 ls~~~~~~------------------~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~ 630 (722)
++...... .....++..|+|||.+.+..++.++|+|||||++|+|++|..||.+....+.+.
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~ 226 (305)
T cd05609 147 LSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFG 226 (305)
T ss_pred CccccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 87531110 011346778999999998889999999999999999999999998876666555
Q ss_pred HHHhhcCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcC--
Q 004954 631 RIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPT-- 708 (722)
Q Consensus 631 ~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpT-- 708 (722)
.+....... |.. ....+..+.+||++||+.||++||+
T Consensus 227 ~~~~~~~~~-----------------------------------~~~------~~~~~~~~~~li~~~l~~~P~~R~~~~ 265 (305)
T cd05609 227 QVISDDIEW-----------------------------------PEG------DEALPADAQDLISRLLRQNPLERLGTG 265 (305)
T ss_pred HHHhcccCC-----------------------------------CCc------cccCCHHHHHHHHHHhccChhhccCcc
Confidence 443111000 000 0123456889999999999999997
Q ss_pred -HHHHHhCCCCCC
Q 004954 709 -AREALDHPWLQH 720 (722)
Q Consensus 709 -a~ElL~HPwf~~ 720 (722)
+.++|+||||..
T Consensus 266 ~~~~ll~~~~~~~ 278 (305)
T cd05609 266 GAFEVKQHRFFLG 278 (305)
T ss_pred CHHHHHhCccccC
Confidence 899999999964
No 203
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3e-37 Score=315.36 Aligned_cols=253 Identities=26% Similarity=0.380 Sum_probs=213.0
Q ss_pred eecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc----hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEE
Q 004954 411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY 486 (722)
Q Consensus 411 ~l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~----~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~ 486 (722)
+-.++|..+++||+|.||+|.+++.+.+++.+|||+++++ ++.....+.|-++|+..+ ||.+..+...|+
T Consensus 165 vTm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~------HPFLt~LKYsFQ 238 (516)
T KOG0690|consen 165 VTMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCR------HPFLTSLKYSFQ 238 (516)
T ss_pred eccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhcc------CcHHHHhhhhhc
Confidence 3446789999999999999999999999999999999874 344455667778887765 789999999999
Q ss_pred ecCeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEe
Q 004954 487 HLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIID 566 (722)
Q Consensus 487 ~~~~l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~D 566 (722)
..+++|+||||.+|+-+-+.... ...+++.+.+.+...|+.||.|||+++||+||||.+|.|++. +|.|||+|
T Consensus 239 t~drlCFVMeyanGGeLf~HLsr-----er~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDk--DGHIKitD 311 (516)
T KOG0690|consen 239 TQDRLCFVMEYANGGELFFHLSR-----ERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDK--DGHIKITD 311 (516)
T ss_pred cCceEEEEEEEccCceEeeehhh-----hhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheecc--CCceEeee
Confidence 99999999999987633332222 223999999999999999999999999999999999999996 99999999
Q ss_pred cCCccc---ccCCccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHH
Q 004954 567 LGSSCF---QTDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEM 643 (722)
Q Consensus 567 FGls~~---~~~~~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~ 643 (722)
||+.+. .+....++||||.|+|||++....|++++|+|.+||+||||++|++||.+.+...++.-|...
T Consensus 312 FGLCKE~I~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~e-------- 383 (516)
T KOG0690|consen 312 FGLCKEEIKYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILME-------- 383 (516)
T ss_pred cccchhcccccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhh--------
Confidence 999864 455667799999999999999999999999999999999999999999988777766665421
Q ss_pred HhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCc-----CHHHHHhCCCC
Q 004954 644 LMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRP-----TAREALDHPWL 718 (722)
Q Consensus 644 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRp-----Ta~ElL~HPwf 718 (722)
+..+|. ..+++.+.||..+|..||.+|. .|.|+.+|+||
T Consensus 384 ---------------------------d~kFPr---------~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF 427 (516)
T KOG0690|consen 384 ---------------------------DLKFPR---------TLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFF 427 (516)
T ss_pred ---------------------------hccCCc---------cCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhh
Confidence 111222 2346688999999999999996 49999999999
Q ss_pred CC
Q 004954 719 QH 720 (722)
Q Consensus 719 ~~ 720 (722)
..
T Consensus 428 ~~ 429 (516)
T KOG0690|consen 428 AS 429 (516)
T ss_pred cc
Confidence 75
No 204
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-37 Score=329.04 Aligned_cols=255 Identities=29% Similarity=0.453 Sum_probs=213.4
Q ss_pred cCcEEEE--EEeccCCCCceEEEEECCCCcEEEEEEeecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 004954 413 AGRYYVT--EYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 487 (722)
Q Consensus 413 ~~rY~i~--~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~---~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~ 487 (722)
..-|+|. ++||+|-||+||-|++..+|+.||||++.+. .....++.+|+.||+.+. ||.||.+--.|++
T Consensus 561 stvYQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~------HPGiV~le~M~ET 634 (888)
T KOG4236|consen 561 STVYQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLH------HPGIVNLECMFET 634 (888)
T ss_pred HHHHHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcC------CCCeeEEEEeecC
Confidence 3446665 6899999999999999999999999998653 344578889999999886 6799999999999
Q ss_pred cCeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCC-CeEEEEe
Q 004954 488 LEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQR-CEIKIID 566 (722)
Q Consensus 488 ~~~l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~-~~vkL~D 566 (722)
.+.+++|||-+.|+.++.+...... .+++...+.++.||+.||.|||.++|+|+||||+|||+.+..+ .++||+|
T Consensus 635 ~ervFVVMEKl~GDMLEMILSsEkg----RL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCD 710 (888)
T KOG4236|consen 635 PERVFVVMEKLHGDMLEMILSSEKG----RLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCD 710 (888)
T ss_pred CceEEEEehhhcchHHHHHHHhhcc----cchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeecc
Confidence 9999999999999999988755433 3999999999999999999999999999999999999986433 4899999
Q ss_pred cCCcccccCC--ccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC-ChHHHHHHHHHhhcCCCcHHH
Q 004954 567 LGSSCFQTDN--LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPN-DAVVMILARIIGMLGPIDLEM 643 (722)
Q Consensus 567 FGls~~~~~~--~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~-~~~~e~l~~i~~~lg~~~~~~ 643 (722)
||+|+..+.. ....+|||.|+|||++..+.|.+..|+||+|||+|--|+|.+||.. .+..+++++-.-+..+-|+.
T Consensus 711 FGfARiIgEksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQNAaFMyPp~PW~- 789 (888)
T KOG4236|consen 711 FGFARIIGEKSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNAAFMYPPNPWS- 789 (888)
T ss_pred ccceeecchhhhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHHhhccccccCCCchh-
Confidence 9999988765 3457999999999999999999999999999999999999999954 34444443322111111110
Q ss_pred HhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCCC
Q 004954 644 LMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 720 (722)
Q Consensus 644 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~~ 720 (722)
..++...|||..+|+..=++|.|.+..|.|||+|.
T Consensus 790 ------------------------------------------eis~~AidlIn~LLqVkm~kRysvdk~lsh~Wlq~ 824 (888)
T KOG4236|consen 790 ------------------------------------------EISPEAIDLINNLLQVKMRKRYSVDKSLSHPWLQD 824 (888)
T ss_pred ------------------------------------------hcCHHHHHHHHHHHHHHHHHhcchHhhccchhhhc
Confidence 12355789999999999999999999999999985
No 205
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=4e-35 Score=303.26 Aligned_cols=251 Identities=26% Similarity=0.408 Sum_probs=201.5
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe--cC
Q 004954 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH--LE 489 (722)
Q Consensus 415 rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~---~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~--~~ 489 (722)
+|++++.||.|+||.||++.+..+++.+|+|++... .....++..|+.+++.++ |+||+++++.+.. ..
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~ 74 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELK------HPNIVRYYDRIIDRSNQ 74 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcC------CCccceeeeeeecCCCC
Confidence 589999999999999999999999999999998643 233455667888877775 6799999998764 35
Q ss_pred eEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHH-----HCCCccccCCCCceEEcccCCCeEE
Q 004954 490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLH-----SLGIIHCDLKPENILIKSYQRCEIK 563 (722)
Q Consensus 490 ~l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLH-----s~gIvHrDLKp~NILl~~~~~~~vk 563 (722)
..+++|||+++ +|.+++..... ....+++..++.++.||+.||.||| +.+++|+||+|+||+++. ++.+|
T Consensus 75 ~~~~~~e~~~~~~L~~~l~~~~~--~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~--~~~~k 150 (265)
T cd08217 75 TLYIVMEYCEGGDLAQLIQKCKK--ERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDA--NNNVK 150 (265)
T ss_pred EEEEEehhccCCCHHHHHHHHhh--cccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEec--CCCEE
Confidence 68999999975 67777654322 1234889999999999999999999 889999999999999995 78999
Q ss_pred EEecCCcccccCCc---cccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCc
Q 004954 564 IIDLGSSCFQTDNL---CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPID 640 (722)
Q Consensus 564 L~DFGls~~~~~~~---~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~ 640 (722)
|+|||++....... ....+++.|+|||++.+..++.++|+||||+++|+|++|+.||...+.......+....
T Consensus 151 l~d~g~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~---- 226 (265)
T cd08217 151 LGDFGLAKILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEGK---- 226 (265)
T ss_pred EecccccccccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhcCC----
Confidence 99999987654432 23467899999999998889999999999999999999999998766444333322100
Q ss_pred HHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCC
Q 004954 641 LEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 718 (722)
Q Consensus 641 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf 718 (722)
...++ ...+..+.+||.+||+.+|.+|||+.++|+|||+
T Consensus 227 ------------------------------~~~~~---------~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~~~ 265 (265)
T cd08217 227 ------------------------------FRRIP---------YRYSSELNEVIKSMLNVDPDKRPSTEELLQLPLI 265 (265)
T ss_pred ------------------------------CCCCc---------cccCHHHHHHHHHHccCCcccCCCHHHHhhCCCC
Confidence 00011 1224568899999999999999999999999997
No 206
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=4.7e-35 Score=303.35 Aligned_cols=252 Identities=29% Similarity=0.448 Sum_probs=201.0
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch-hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEE
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF 492 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~-~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~ 492 (722)
++|++.+.||.|+||.||++.+..+++.+|+|++.... .....+.+|+.+++.++ ||||+++++.+.....++
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~------h~~i~~~~~~~~~~~~~~ 76 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECR------HPNIVAYFGSYLRRDKLW 76 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCC------CCChhceEEEEEeCCEEE
Confidence 68999999999999999999999999999999987643 23456777888777764 789999999999999999
Q ss_pred EEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCcc
Q 004954 493 IVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 571 (722)
Q Consensus 493 iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~ 571 (722)
++|||+++ +|.+++.... ..+++..++.++.|++.||+|||+.||+|+||+|+||+++. ++.++|+|||++.
T Consensus 77 l~~e~~~~~~l~~~~~~~~-----~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~--~~~~~l~d~g~~~ 149 (262)
T cd06613 77 IVMEYCGGGSLQDIYQVTR-----GPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTE--DGDVKLADFGVSA 149 (262)
T ss_pred EEEeCCCCCcHHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECC--CCCEEECccccch
Confidence 99999986 5555554321 23889999999999999999999999999999999999995 7789999999987
Q ss_pred cccCC---ccccccCCcccCchhhcCC---CCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHh
Q 004954 572 FQTDN---LCLYVQSRSYRAPEVIIGL---PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLM 645 (722)
Q Consensus 572 ~~~~~---~~~~~gt~~y~APE~l~~~---~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~ 645 (722)
..... .....++..|+|||.+.+. .++.++|+||||+++|+|++|.+||...+.......+.... ++
T Consensus 150 ~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~--~~----- 222 (262)
T cd06613 150 QLTATIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSN--FP----- 222 (262)
T ss_pred hhhhhhhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcc--CC-----
Confidence 64432 2334678899999999877 78899999999999999999999998765444332221100 00
Q ss_pred hhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCC
Q 004954 646 QGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPW 717 (722)
Q Consensus 646 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPw 717 (722)
.+. +. .....+..+.+||++||..+|..|||+.++|.|||
T Consensus 223 ----------------------------~~~---~~-~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~ 262 (262)
T cd06613 223 ----------------------------PPK---LK-DKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQHPF 262 (262)
T ss_pred ----------------------------Ccc---cc-chhhhhHHHHHHHHHHcCCChhhCCCHHHHhcCCC
Confidence 000 00 00012356889999999999999999999999999
No 207
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=1.4e-35 Score=321.08 Aligned_cols=281 Identities=32% Similarity=0.532 Sum_probs=217.7
Q ss_pred eecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 004954 411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 487 (722)
Q Consensus 411 ~l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~---~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~ 487 (722)
.+.++|++.+.||+|+||.||+|.+..+|+.+|+|.+... ........+|+.+++.+. .|+||+++++++..
T Consensus 4 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~-----~h~ni~~~~~~~~~ 78 (337)
T cd07852 4 HILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELG-----DHPNIVKLLNVIKA 78 (337)
T ss_pred hhhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhc-----CCCCccceeeeecc
Confidence 4568899999999999999999999989999999987542 223345667888888772 36899999999875
Q ss_pred c--CeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEE
Q 004954 488 L--EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKII 565 (722)
Q Consensus 488 ~--~~l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~ 565 (722)
. ...++||||+.++|...+... .+.+..++.++.||+.||+|||+.||+|+||||+||+++. ++.+||+
T Consensus 79 ~~~~~~~lv~e~~~~~L~~~~~~~-------~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~--~~~~kl~ 149 (337)
T cd07852 79 ENDKDIYLVFEYMETDLHAVIRAN-------ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNS--DCRVKLA 149 (337)
T ss_pred CCCceEEEEecccccCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcC--CCcEEEe
Confidence 4 468999999998887776532 2778889999999999999999999999999999999986 8899999
Q ss_pred ecCCcccccCC--------ccccccCCcccCchhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhc
Q 004954 566 DLGSSCFQTDN--------LCLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGML 636 (722)
Q Consensus 566 DFGls~~~~~~--------~~~~~gt~~y~APE~l~~-~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~l 636 (722)
|||.+...... .....+++.|+|||.+.+ ..++.++||||||+++|+|++|++||.+....+.+.++....
T Consensus 150 d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~ 229 (337)
T cd07852 150 DFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVI 229 (337)
T ss_pred eccchhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh
Confidence 99988654321 223567889999998765 457889999999999999999999999988888888888777
Q ss_pred CCCcHHHHhhhhhhh--hhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHh
Q 004954 637 GPIDLEMLMQGQEIY--KYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 714 (722)
Q Consensus 637 g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~ 714 (722)
+..+...+....... ..+.. .............+..+..+.+||.+||+.||++|||+.++|+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~ 294 (337)
T cd07852 230 GPPSAEDIESIKSPFAATMLDS---------------LPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALE 294 (337)
T ss_pred CCCCHHHHHHHHhhhHHHhhhh---------------cccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhh
Confidence 766655443322110 00000 0000011111222234677999999999999999999999999
Q ss_pred CCCCCC
Q 004954 715 HPWLQH 720 (722)
Q Consensus 715 HPwf~~ 720 (722)
||||+.
T Consensus 295 ~~~~~~ 300 (337)
T cd07852 295 HPYVAQ 300 (337)
T ss_pred Chhhhh
Confidence 999964
No 208
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=3.9e-35 Score=302.93 Aligned_cols=248 Identities=29% Similarity=0.401 Sum_probs=199.1
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch------hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec
Q 004954 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK------DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 488 (722)
Q Consensus 415 rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~------~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~ 488 (722)
+|+..+.||+|++|+||+|.+..+++.|++|.+.... .....+.+|+.+++.++ |+||+++++++...
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~------h~~i~~~~~~~~~~ 74 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQ------HPNIVQYLGTEREE 74 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcC------CCCchheeeeEecC
Confidence 5788899999999999999998899999999886532 23456677887777664 67999999999999
Q ss_pred CeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEec
Q 004954 489 EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDL 567 (722)
Q Consensus 489 ~~l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DF 567 (722)
...++||||+++ +|.+++.... .+++..+..++.||+.||+|||+.||+|+||+|+||+++. ++.+||+||
T Consensus 75 ~~~~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~--~~~~kl~d~ 146 (258)
T cd06632 75 DNLYIFLELVPGGSLAKLLKKYG------SFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDT--NGVVKLADF 146 (258)
T ss_pred CeEEEEEEecCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC--CCCEEEccC
Confidence 999999999985 6666665321 2788999999999999999999999999999999999986 788999999
Q ss_pred CCcccccCC--ccccccCCcccCchhhcCCC-CCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHH
Q 004954 568 GSSCFQTDN--LCLYVQSRSYRAPEVIIGLP-YDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEML 644 (722)
Q Consensus 568 Gls~~~~~~--~~~~~gt~~y~APE~l~~~~-~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~ 644 (722)
|++...... .....+++.|+|||.+.... ++.++|+||||+++|+|++|+.||...........+....
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~-------- 218 (258)
T cd06632 147 GMAKQVVEFSFAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSK-------- 218 (258)
T ss_pred ccceeccccccccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhcc--------
Confidence 988654433 23456788999999998766 8999999999999999999999997654333322221000
Q ss_pred hhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCC
Q 004954 645 MQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 718 (722)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf 718 (722)
....++ ...++.+.+||++||+.+|.+||++.++|+||||
T Consensus 219 -------------------------~~~~~~---------~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 258 (258)
T cd06632 219 -------------------------ELPPIP---------DHLSDEAKDFILKCLQRDPSLRPTAAELLEHPFV 258 (258)
T ss_pred -------------------------cCCCcC---------CCcCHHHHHHHHHHhhcCcccCcCHHHHhcCCCC
Confidence 000011 1234678899999999999999999999999997
No 209
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=8.5e-35 Score=307.51 Aligned_cols=260 Identities=30% Similarity=0.435 Sum_probs=200.3
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec--C
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL--E 489 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~--~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~--~ 489 (722)
++|.+.+.||.|++|.||++.+..+++.+|+|++.... ....++.+|+++++.++ ||||++++++|... .
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~------h~~iv~~~~~~~~~~~~ 74 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCK------SPYIVKYYGAFLDESSS 74 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCC------CCCeeeeeeEEEccCCC
Confidence 47999999999999999999999999999999987543 24456778888877764 78999999998754 4
Q ss_pred eEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecC
Q 004954 490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (722)
Q Consensus 490 ~l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFG 568 (722)
.+++||||+++ +|.+++..... ....+++..+..++.||+.||+|||+.|++|+||+|+||+++. ++.++|+|||
T Consensus 75 ~~~lv~e~~~~~~L~~~l~~~~~--~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~--~~~~~l~dfg 150 (287)
T cd06621 75 SIGIAMEYCEGGSLDSIYKKVKK--RGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTR--KGQVKLCDFG 150 (287)
T ss_pred eEEEEEEecCCCCHHHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEec--CCeEEEeecc
Confidence 78999999975 66665543222 1233888999999999999999999999999999999999986 7789999999
Q ss_pred CcccccCC-ccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChH-----HHHHHHHHhhcCCCcHH
Q 004954 569 SSCFQTDN-LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAV-----VMILARIIGMLGPIDLE 642 (722)
Q Consensus 569 ls~~~~~~-~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~-----~e~l~~i~~~lg~~~~~ 642 (722)
++...... .....++..|+|||.+.+..++.++|||||||++|+|++|..||..... .+....+... .
T Consensus 151 ~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----~-- 224 (287)
T cd06621 151 VSGELVNSLAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNM----P-- 224 (287)
T ss_pred ccccccccccccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcC----C--
Confidence 98654332 2234578889999999998999999999999999999999999975421 1111111100 0
Q ss_pred HHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCCC
Q 004954 643 MLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 720 (722)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~~ 720 (722)
...+....+.. ...++.+.+||.+||+.+|++|||+.|+++||||++
T Consensus 225 ------------------------~~~~~~~~~~~-------~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~~ 271 (287)
T cd06621 225 ------------------------NPELKDEPGNG-------IKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKA 271 (287)
T ss_pred ------------------------chhhccCCCCC-------CchHHHHHHHHHHHcCCCcccCCCHHHHHhCccccc
Confidence 00000000000 012356889999999999999999999999999965
No 210
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=5.3e-35 Score=311.68 Aligned_cols=259 Identities=20% Similarity=0.248 Sum_probs=195.9
Q ss_pred ecCcEEEEEEeccCCCCceEEEEECC----------------CCcEEEEEEeecc--hhhhHhHHHHHHHHHHhcccCCC
Q 004954 412 IAGRYYVTEYLGSAAFSKVFQAQDLH----------------TGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPA 473 (722)
Q Consensus 412 l~~rY~i~~~LG~G~fG~Vy~a~d~~----------------tg~~vAvKil~~~--~~~~~~~~~E~~il~~L~~~~~~ 473 (722)
..++|++.++||+|+||.||+|.+.. ++..||+|++... ......+.+|+.+++.++
T Consensus 3 ~~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~----- 77 (304)
T cd05096 3 PRGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLK----- 77 (304)
T ss_pred chhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcC-----
Confidence 35789999999999999999997532 3457999998763 233456778888887774
Q ss_pred CCCceeEEEEEEEecCeEEEEEEcccc-chHHHHhhhhcc-------------CCCcccCHHHHHHHHHHHHHHHHHHHH
Q 004954 474 DEHHILRLYDYFYHLEHLFIVCELLRA-NLYEFQKFNQES-------------GGEAYFTLGRLQVITRQCLEALEYLHS 539 (722)
Q Consensus 474 ~hpnIv~l~~~f~~~~~l~iVmEy~~g-sLl~~l~~~~~~-------------~~~~~ls~~~i~~i~~qIl~aL~yLHs 539 (722)
||||+++++++...+..++||||+.+ +|.+++...... .....+++..++.++.||+.||.|||+
T Consensus 78 -h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~ 156 (304)
T cd05096 78 -DPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSS 156 (304)
T ss_pred -CCCeeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHH
Confidence 68999999999999999999999974 677766543211 111237788899999999999999999
Q ss_pred CCCccccCCCCceEEcccCCCeEEEEecCCcccccCCc-----cccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHH
Q 004954 540 LGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNL-----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELW 614 (722)
Q Consensus 540 ~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~~~~-----~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ell 614 (722)
.||+||||||+|||++. ++.+||+|||++....... ....++..|+|||++.+..++.++|||||||++|+|+
T Consensus 157 ~~ivH~dlkp~Nill~~--~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~ 234 (304)
T cd05096 157 LNFVHRDLATRNCLVGE--NLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEIL 234 (304)
T ss_pred CCccccCcchhheEEcC--CccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHH
Confidence 99999999999999996 7889999999987543321 1233477899999999889999999999999999998
Q ss_pred h--CCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHH
Q 004954 615 T--GEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFI 692 (722)
Q Consensus 615 t--G~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~ 692 (722)
+ +..||...+..+.+..+...+... ........ +...+..+.
T Consensus 235 ~~~~~~p~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~---------~~~~~~~~~ 278 (304)
T cd05096 235 MLCKEQPYGELTDEQVIENAGEFFRDQ---------------------------GRQVYLFR---------PPPCPQGLY 278 (304)
T ss_pred HccCCCCCCcCCHHHHHHHHHHHhhhc---------------------------cccccccC---------CCCCCHHHH
Confidence 7 678887766555544332111000 00000000 112346689
Q ss_pred HHHHHhcccCCCCCcCHHHHHh
Q 004954 693 DFVRTLLEINPQRRPTAREALD 714 (722)
Q Consensus 693 dLL~~mL~~dP~kRpTa~ElL~ 714 (722)
+||.+||+.||.+|||+.++.+
T Consensus 279 ~li~~cl~~~p~~RPs~~~i~~ 300 (304)
T cd05096 279 ELMLQCWSRDCRERPSFSDIHA 300 (304)
T ss_pred HHHHHHccCCchhCcCHHHHHH
Confidence 9999999999999999999954
No 211
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=4.9e-35 Score=302.36 Aligned_cols=250 Identities=25% Similarity=0.394 Sum_probs=201.5
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 004954 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (722)
Q Consensus 415 rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~---~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (722)
+|.+.+.||+|+||.||++.++.+|..+|+|.+.... ...+.+.+|+.+++.++ |+||+++++.+......
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~------h~~i~~~~~~~~~~~~~ 74 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMK------HPNIVTFFASFQENGRL 74 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCC------CCChhhhhheeccCCeE
Confidence 5899999999999999999999999999999986532 23456677888888775 67999999999999999
Q ss_pred EEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCc
Q 004954 492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (722)
Q Consensus 492 ~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 570 (722)
++|+||+.+ +|.+.+..... ..+++..+..++.||+.||.|||+.+++|+||||+||+++. ....++|+|||.+
T Consensus 75 ~lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~-~~~~~~l~d~~~~ 149 (257)
T cd08225 75 FIVMEYCDGGDLMKRINRQRG----VLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSK-NGMVAKLGDFGIA 149 (257)
T ss_pred EEEEecCCCCcHHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcC-CCCeEEecccccc
Confidence 999999975 67666653221 23789999999999999999999999999999999999985 2345799999988
Q ss_pred ccccCCc---cccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 004954 571 CFQTDNL---CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 647 (722)
Q Consensus 571 ~~~~~~~---~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~ 647 (722)
....... ....+++.|+|||++.+..++.++|+||||+++|+|++|..||...+.......+...
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~------------ 217 (257)
T cd08225 150 RQLNDSMELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQG------------ 217 (257)
T ss_pred hhccCCcccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcc------------
Confidence 7654432 2245788999999998888999999999999999999999999876554444332210
Q ss_pred hhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCC
Q 004954 648 QEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 718 (722)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf 718 (722)
... .+ ....+..+.++|.+||+.+|++|||+.++++||||
T Consensus 218 ---------------------~~~-~~---------~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~~~~ 257 (257)
T cd08225 218 ---------------------YFA-PI---------SPNFSRDLRSLISQLFKVSPRDRPSITSILKRPFL 257 (257)
T ss_pred ---------------------cCC-CC---------CCCCCHHHHHHHHHHhccChhhCcCHHHHhhCCCC
Confidence 000 00 01123568899999999999999999999999997
No 212
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=1.8e-35 Score=311.95 Aligned_cols=261 Identities=26% Similarity=0.369 Sum_probs=199.7
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~--~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (722)
++|...+.||+|+||.||++.+..+++.+|+|.+.... .....+.+|+.++.++. +|+||+++++++......
T Consensus 4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~-----~~~~iv~~~~~~~~~~~~ 78 (288)
T cd06616 4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSS-----DCPYIVKFYGALFREGDC 78 (288)
T ss_pred HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhc-----CCCCEeeeeeEEecCCcE
Confidence 35667788999999999999999999999999987532 33455677777777664 378999999999999999
Q ss_pred EEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHC-CCccccCCCCceEEcccCCCeEEEEecCCc
Q 004954 492 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL-GIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (722)
Q Consensus 492 ~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~-gIvHrDLKp~NILl~~~~~~~vkL~DFGls 570 (722)
+++|||+..++.++....... ....+++..+..++.|++.||+|||+. +++||||||+||+++. ++.++|+|||++
T Consensus 79 ~~~~e~~~~~l~~l~~~~~~~-~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~--~~~~kl~dfg~~ 155 (288)
T cd06616 79 WICMELMDISLDKFYKYVYEV-LKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDR--NGNIKLCDFGIS 155 (288)
T ss_pred EEEEecccCCHHHHHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEcc--CCcEEEeecchh
Confidence 999999987766654332111 113389999999999999999999975 9999999999999986 778999999998
Q ss_pred ccccCC--ccccccCCcccCchhhcCC---CCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHh
Q 004954 571 CFQTDN--LCLYVQSRSYRAPEVIIGL---PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLM 645 (722)
Q Consensus 571 ~~~~~~--~~~~~gt~~y~APE~l~~~---~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~ 645 (722)
...... .....+++.|+|||++.+. .++.++|||||||++|+|++|+.||.... .....+.......+
T Consensus 156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~--~~~~~~~~~~~~~~----- 228 (288)
T cd06616 156 GQLVDSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN--SVFDQLTQVVKGDP----- 228 (288)
T ss_pred HHhccCCccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc--hHHHHHhhhcCCCC-----
Confidence 654332 2234678899999999876 68899999999999999999999997543 11111111100000
Q ss_pred hhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCCC
Q 004954 646 QGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 720 (722)
Q Consensus 646 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~~ 720 (722)
..++.. .....+..+.+||++||+.||++|||+.++++||||+.
T Consensus 229 --------------------------~~~~~~-----~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 272 (288)
T cd06616 229 --------------------------PILSNS-----EEREFSPSFVNFINLCLIKDESKRPKYKELLEHPFIKD 272 (288)
T ss_pred --------------------------CcCCCc-----CCCccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhc
Confidence 000000 00123567899999999999999999999999999975
No 213
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=5.3e-35 Score=305.71 Aligned_cols=246 Identities=17% Similarity=0.221 Sum_probs=193.3
Q ss_pred cCcEEEEEEeccCCCCceEEEEEC---CCCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 004954 413 AGRYYVTEYLGSAAFSKVFQAQDL---HTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 487 (722)
Q Consensus 413 ~~rY~i~~~LG~G~fG~Vy~a~d~---~tg~~vAvKil~~~~--~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~ 487 (722)
..+|++.+.||+|+||.||+|.++ ..+..||+|+++... .....+.+|+.+++.+ .||||+++++++..
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l------~h~~iv~~~~~~~~ 77 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQF------DHSNIVRLEGVITR 77 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcC------CCCCcCeEEEEEec
Confidence 467999999999999999999764 456789999987643 2234556677777655 47899999999999
Q ss_pred cCeEEEEEEccccc-hHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEe
Q 004954 488 LEHLFIVCELLRAN-LYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIID 566 (722)
Q Consensus 488 ~~~l~iVmEy~~gs-Ll~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~D 566 (722)
.++.++||||++++ |.+++.... ..+++..++.++.||+.||+|||++|++||||||+|||++. ++.++|+|
T Consensus 78 ~~~~~lv~e~~~~~~L~~~l~~~~-----~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~--~~~~~l~d 150 (266)
T cd05064 78 GNTMMIVTEYMSNGALDSFLRKHE-----GQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNS--DLVCKISG 150 (266)
T ss_pred CCCcEEEEEeCCCCcHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcC--CCcEEECC
Confidence 99999999999865 544554321 23889999999999999999999999999999999999985 78899999
Q ss_pred cCCcccccCCc----cccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcH
Q 004954 567 LGSSCFQTDNL----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDL 641 (722)
Q Consensus 567 FGls~~~~~~~----~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~~i~~~lg~~~~ 641 (722)
||.+....... ....++..|+|||.+.+..++.++|||||||++|++++ |..||.+.+..+.+..+.....
T Consensus 151 fg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~---- 226 (266)
T cd05064 151 FRRLQEDKSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGFR---- 226 (266)
T ss_pred CcccccccccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCC----
Confidence 99875432221 11234578999999999999999999999999999875 9999988766655544421100
Q ss_pred HHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHh
Q 004954 642 EMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 714 (722)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~ 714 (722)
...| ...+..+.+++.+||+.+|.+||+++++++
T Consensus 227 ------------------------------~~~~---------~~~~~~~~~li~~c~~~~p~~RP~~~~i~~ 260 (266)
T cd05064 227 ------------------------------LPAP---------RNCPNLLHQLMLDCWQKERGERPRFSQIHS 260 (266)
T ss_pred ------------------------------CCCC---------CCCCHHHHHHHHHHcCCCchhCCCHHHHHH
Confidence 0011 123456889999999999999999999975
No 214
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=1.5e-35 Score=307.85 Aligned_cols=252 Identities=32% Similarity=0.440 Sum_probs=201.8
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~--~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (722)
++|++.+.||+|++|.||++.++.+++.+|+|++.... ....++.+|+.+++.+. ||||+++++.+......
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~------~~~i~~~~~~~~~~~~~ 74 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCN------SPYIVGFYGAFYNNGDI 74 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCC------CCchhhhheeeecCCEE
Confidence 36788899999999999999999999999999987653 33455677777777664 78999999999999999
Q ss_pred EEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHH-CCCccccCCCCceEEcccCCCeEEEEecCC
Q 004954 492 FIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS-LGIIHCDLKPENILIKSYQRCEIKIIDLGS 569 (722)
Q Consensus 492 ~iVmEy~~-gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs-~gIvHrDLKp~NILl~~~~~~~vkL~DFGl 569 (722)
++||||+. ++|.+++.... ..+++..+..++.|++.||.|||+ .|++|+||||+||+++. ++.++|+|||.
T Consensus 75 ~lv~e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~--~~~~~l~d~g~ 147 (265)
T cd06605 75 SICMEYMDGGSLDKILKEVQ-----GRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNS--RGQIKLCDFGV 147 (265)
T ss_pred EEEEEecCCCcHHHHHHHcc-----CCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECC--CCCEEEeeccc
Confidence 99999998 56777665432 238899999999999999999999 99999999999999996 77899999998
Q ss_pred cccccCC-ccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCh-----HHHHHHHHHhhcCCCcHHH
Q 004954 570 SCFQTDN-LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDA-----VVMILARIIGMLGPIDLEM 643 (722)
Q Consensus 570 s~~~~~~-~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~-----~~e~l~~i~~~lg~~~~~~ 643 (722)
+...... .....++..|+|||.+.+..++.++||||||+++|+|++|..||.... ..+.+..+...
T Consensus 148 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-------- 219 (265)
T cd06605 148 SGQLVNSLAKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNE-------- 219 (265)
T ss_pred chhhHHHHhhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcC--------
Confidence 8654322 112567889999999999999999999999999999999999996542 11111111100
Q ss_pred HhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCCC
Q 004954 644 LMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 720 (722)
Q Consensus 644 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~~ 720 (722)
.....+.. ..+..+.+||.+||..||.+|||+.+++.||||+.
T Consensus 220 --------------------------~~~~~~~~--------~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~~~ 262 (265)
T cd06605 220 --------------------------PPPRLPSG--------KFSPDFQDFVNLCLIKDPRERPSYKELLEHPFIKK 262 (265)
T ss_pred --------------------------CCCCCChh--------hcCHHHHHHHHHHcCCCchhCcCHHHHhhCchhhc
Confidence 00001100 03466899999999999999999999999999964
No 215
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=6.6e-35 Score=304.47 Aligned_cols=249 Identities=28% Similarity=0.395 Sum_probs=195.3
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch------hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK------DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 487 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~------~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~ 487 (722)
.+|++.+.||+|+||.||++.+..++..+|+|++.... .....+.+|+.+++.++ ||||+++++.+..
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~ 75 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQ------HERIVQYYGCLRD 75 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcC------CCCeeeEEEEEEc
Confidence 36899999999999999999999999999999886431 22345667888887775 6799999999875
Q ss_pred c--CeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEE
Q 004954 488 L--EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKI 564 (722)
Q Consensus 488 ~--~~l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL 564 (722)
. ..++++|||+.+ +|.+.+.... .+++..++.++.||+.||.|||+.+|+|+||+|+||+++. ++.++|
T Consensus 76 ~~~~~~~l~~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~--~~~~~l 147 (266)
T cd06651 76 RAEKTLTIFMEYMPGGSVKDQLKAYG------ALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDS--AGNVKL 147 (266)
T ss_pred CCCCEEEEEEeCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECC--CCCEEE
Confidence 3 678999999975 6766665322 2788899999999999999999999999999999999985 778999
Q ss_pred EecCCcccccCC------ccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCC
Q 004954 565 IDLGSSCFQTDN------LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGP 638 (722)
Q Consensus 565 ~DFGls~~~~~~------~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~ 638 (722)
+|||++...... .....++..|+|||.+.+..++.++|+|||||++|+|++|+.||...........+....
T Consensus 148 ~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~~-- 225 (266)
T cd06651 148 GDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQP-- 225 (266)
T ss_pred ccCCCccccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcCC--
Confidence 999998654321 122457888999999999889999999999999999999999997654333322221000
Q ss_pred CcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCC
Q 004954 639 IDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 718 (722)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf 718 (722)
....+| ...++.+.+|| +||..+|++||+++|+++||||
T Consensus 226 -------------------------------~~~~~~---------~~~~~~~~~li-~~~~~~p~~Rp~~~eil~hp~~ 264 (266)
T cd06651 226 -------------------------------TNPQLP---------SHISEHARDFL-GCIFVEARHRPSAEELLRHPFA 264 (266)
T ss_pred -------------------------------CCCCCc---------hhcCHHHHHHH-HHhcCChhhCcCHHHHhcCccc
Confidence 000011 12245677888 5777899999999999999999
Q ss_pred C
Q 004954 719 Q 719 (722)
Q Consensus 719 ~ 719 (722)
+
T Consensus 265 ~ 265 (266)
T cd06651 265 Q 265 (266)
T ss_pred c
Confidence 7
No 216
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=8.8e-35 Score=303.00 Aligned_cols=249 Identities=20% Similarity=0.299 Sum_probs=202.3
Q ss_pred ecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 004954 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (722)
Q Consensus 412 l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (722)
....|.+.+.||+|+||.||+|.+..+++.+|+|++..+......+.+|+.+++.+. |+||+++++++......
T Consensus 4 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~~ 77 (263)
T cd05052 4 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK------HPNLVQLLGVCTREPPF 77 (263)
T ss_pred chHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCC------CCChhheEEEEcCCCCc
Confidence 345699999999999999999999999999999999876555567788888888874 67999999999999999
Q ss_pred EEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCc
Q 004954 492 FIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (722)
Q Consensus 492 ~iVmEy~~-gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 570 (722)
++||||+. ++|.+++..... ..+++..++.++.|++.||+|||+.|++||||||+||+++. ++.+||+|||++
T Consensus 78 ~lv~e~~~~~~L~~~~~~~~~----~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~--~~~~kl~df~~~ 151 (263)
T cd05052 78 YIITEFMTYGNLLDYLRECNR----QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE--NHLVKVADFGLS 151 (263)
T ss_pred EEEEEeCCCCcHHHHHHhCCC----CCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcC--CCcEEeCCCccc
Confidence 99999997 467776653321 23888999999999999999999999999999999999985 788999999998
Q ss_pred ccccCCccc----cccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHHHHh
Q 004954 571 CFQTDNLCL----YVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLM 645 (722)
Q Consensus 571 ~~~~~~~~~----~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~~i~~~lg~~~~~~~~ 645 (722)
......... ...++.|+|||.+.+..++.++|||||||++|+|++ |..||++....+....+....
T Consensus 152 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~--------- 222 (263)
T cd05052 152 RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGY--------- 222 (263)
T ss_pred cccccceeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCC---------
Confidence 765443211 223567999999999999999999999999999998 999998876655544432110
Q ss_pred hhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhC
Q 004954 646 QGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 715 (722)
Q Consensus 646 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~H 715 (722)
....| ...+..+.+||.+||+.||++|||+.++++.
T Consensus 223 -------------------------~~~~~---------~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~ 258 (263)
T cd05052 223 -------------------------RMERP---------EGCPPKVYELMRACWQWNPSDRPSFAEIHQA 258 (263)
T ss_pred -------------------------CCCCC---------CCCCHHHHHHHHHHccCCcccCCCHHHHHHH
Confidence 00011 1224668899999999999999999999864
No 217
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=6.5e-35 Score=302.88 Aligned_cols=247 Identities=26% Similarity=0.416 Sum_probs=192.7
Q ss_pred EEeccCCCCceEEEEECCCCcEEEEEEeecchhh----hHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEE
Q 004954 420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF----FDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVC 495 (722)
Q Consensus 420 ~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~~----~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~iVm 495 (722)
+.||.|+||.||+|.+..+|+.||+|+++..... ......|..++.. ...|+||+++++++...+..++||
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~-----~~~~~~i~~~~~~~~~~~~~~lv~ 76 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMI-----QGESPYVAKLYYSFQSKDYLYLVM 76 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhh-----cCCCCCeeeeeeeEEcCCeEEEEE
Confidence 5699999999999999999999999998754321 1122233322222 236899999999999999999999
Q ss_pred Ecccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCccccc
Q 004954 496 ELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT 574 (722)
Q Consensus 496 Ey~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~ 574 (722)
||+.+ +|.+++.... .+++..+..++.||+.||.|||+.+++|+||+|+||+++. ++.++|+|||++....
T Consensus 77 e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~--~~~~~l~dfg~~~~~~ 148 (260)
T cd05611 77 EYLNGGDCASLIKTLG------GLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQ--TGHLKLTDFGLSRNGL 148 (260)
T ss_pred eccCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECC--CCcEEEeecccceecc
Confidence 99975 6666654322 2889999999999999999999999999999999999986 7889999999887544
Q ss_pred CCccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhh
Q 004954 575 DNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYF 654 (722)
Q Consensus 575 ~~~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~~~~~~~ 654 (722)
. .....+++.|+|||.+.+..++.++||||||+++|+|++|..||...+.......+......
T Consensus 149 ~-~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~---------------- 211 (260)
T cd05611 149 E-NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRIN---------------- 211 (260)
T ss_pred c-cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccC----------------
Confidence 3 23346788999999999888899999999999999999999999877665554443211000
Q ss_pred cccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcC---HHHHHhCCCCCC
Q 004954 655 TKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPT---AREALDHPWLQH 720 (722)
Q Consensus 655 ~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpT---a~ElL~HPwf~~ 720 (722)
.+.. .....+..+.++|.+||+.||++||+ ++|+|.||||++
T Consensus 212 -------------------~~~~-----~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~~ 256 (260)
T cd05611 212 -------------------WPEE-----VKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFKS 256 (260)
T ss_pred -------------------CCCc-----ccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcChHhhc
Confidence 0000 00123466889999999999999995 579999999976
No 218
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=7.4e-35 Score=308.52 Aligned_cols=237 Identities=20% Similarity=0.245 Sum_probs=192.6
Q ss_pred EEeccCCCCceEEEEECCCCcEEEEEEeecchhh----hHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe----cCeE
Q 004954 420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF----FDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH----LEHL 491 (722)
Q Consensus 420 ~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~~----~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~----~~~l 491 (722)
..||+|+++.||+|.. +|+.||||+++..... .+.+.+|+.++++++ ||||+++++++.. ...+
T Consensus 26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~------h~nIv~~~g~~~~~~~~~~~~ 97 (283)
T PHA02988 26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRID------SNNILKIYGFIIDIVDDLPRL 97 (283)
T ss_pred eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcC------CCCEEEEeeeEEecccCCCce
Confidence 4689999999999986 7899999998764322 355668899888875 6799999999987 3578
Q ss_pred EEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHC-CCccccCCCCceEEcccCCCeEEEEecCC
Q 004954 492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL-GIIHCDLKPENILIKSYQRCEIKIIDLGS 569 (722)
Q Consensus 492 ~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~-gIvHrDLKp~NILl~~~~~~~vkL~DFGl 569 (722)
++||||+.+ +|.+++.... .+++.....++.|++.||.|||+. +++||||||+|||++. ++.+||+|||+
T Consensus 98 ~lv~Ey~~~g~L~~~l~~~~------~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~--~~~~kl~dfg~ 169 (283)
T PHA02988 98 SLILEYCTRGYLREVLDKEK------DLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTE--NYKLKIICHGL 169 (283)
T ss_pred EEEEEeCCCCcHHHHHhhCC------CCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECC--CCcEEEcccch
Confidence 999999986 5766665322 278889999999999999999984 9999999999999996 78899999999
Q ss_pred cccccCCccccccCCcccCchhhcC--CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 004954 570 SCFQTDNLCLYVQSRSYRAPEVIIG--LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 647 (722)
Q Consensus 570 s~~~~~~~~~~~gt~~y~APE~l~~--~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~ 647 (722)
+...........+++.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..++...+......
T Consensus 170 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~--------- 240 (283)
T PHA02988 170 EKILSSPPFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNS--------- 240 (283)
T ss_pred HhhhccccccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCC---------
Confidence 9876655555678999999999976 67899999999999999999999999887766665554311100
Q ss_pred hhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHh
Q 004954 648 QEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 714 (722)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~ 714 (722)
..+| ...+..+.+||.+||+.||++|||+.|+++
T Consensus 241 ------------------------~~~~---------~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 274 (283)
T PHA02988 241 ------------------------LKLP---------LDCPLEIKCIVEACTSHDSIKRPNIKEILY 274 (283)
T ss_pred ------------------------CCCC---------CcCcHHHHHHHHHHhcCCcccCcCHHHHHH
Confidence 0011 113467899999999999999999999986
No 219
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=3e-35 Score=305.04 Aligned_cols=246 Identities=27% Similarity=0.416 Sum_probs=200.2
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCe
Q 004954 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 490 (722)
Q Consensus 415 rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~----~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~ 490 (722)
+|++.+.||.|+||.||++.+..+++.+|+|++.... ...+.+.+|+++++.++ ||||+++++.+.....
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~ 74 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELN------HPFLVNLWYSFQDEEN 74 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCC------CCChHHHHHhhcCCCe
Confidence 5899999999999999999999999999999997532 33456677777777664 7899999999999999
Q ss_pred EEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCC
Q 004954 491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS 569 (722)
Q Consensus 491 l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGl 569 (722)
.++||||+.+ +|...+... ..+++..+..++.||++||.|||++|++|+||+|+||+++. ++.++|+|||.
T Consensus 75 ~~lv~e~~~~~~L~~~l~~~------~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~--~~~~~l~d~~~ 146 (258)
T cd05578 75 MYLVVDLLLGGDLRYHLSQK------VKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDE--QGHVHITDFNI 146 (258)
T ss_pred EEEEEeCCCCCCHHHHHHhc------CCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcC--CCCEEEeeccc
Confidence 9999999986 565555433 23889999999999999999999999999999999999986 78899999998
Q ss_pred cccccCC--ccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChH---HHHHHHHHhhcCCCcHHHH
Q 004954 570 SCFQTDN--LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAV---VMILARIIGMLGPIDLEML 644 (722)
Q Consensus 570 s~~~~~~--~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~---~e~l~~i~~~lg~~~~~~~ 644 (722)
+...... .....++..|+|||.+.+..++.++|+||||+++|+|++|..||...+. ..+...+..
T Consensus 147 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~---------- 216 (258)
T cd05578 147 ATKVTPDTLTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQET---------- 216 (258)
T ss_pred ccccCCCccccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhcc----------
Confidence 8765443 2335678889999999988899999999999999999999999976553 111111100
Q ss_pred hhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCH--HHHHhCCCC
Q 004954 645 MQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTA--REALDHPWL 718 (722)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa--~ElL~HPwf 718 (722)
.....|. ..+..+.++|++||+.||.+||++ +|+++||||
T Consensus 217 -------------------------~~~~~~~---------~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~~~~ 258 (258)
T cd05578 217 -------------------------ADVLYPA---------TWSTEAIDAINKLLERDPQKRLGDNLKDLKNHPYF 258 (258)
T ss_pred -------------------------ccccCcc---------cCcHHHHHHHHHHccCChhHcCCccHHHHhcCCCC
Confidence 0011111 123668899999999999999999 999999998
No 220
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=1.1e-34 Score=300.37 Aligned_cols=246 Identities=25% Similarity=0.417 Sum_probs=199.4
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEE
Q 004954 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF 492 (722)
Q Consensus 415 rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~--~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~ 492 (722)
+|++.+.||.|+||.||++++..+++.+|+|.++.. ....+...+|+.+++.++ |+||+++++.+...+.++
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~~~ 74 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMK------HPNIVAFKESFEADGHLY 74 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCC------CCCcceEEEEEEECCEEE
Confidence 589999999999999999999999999999998643 233456667878777664 789999999999999999
Q ss_pred EEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCcc
Q 004954 493 IVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 571 (722)
Q Consensus 493 iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~ 571 (722)
+||||+++ ++.+++.... ...+++..++.++.||+.||.|||+.||+|+||||+||+++. ++.++|+|||.+.
T Consensus 75 lv~e~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~--~~~~~l~dfg~~~ 148 (255)
T cd08219 75 IVMEYCDGGDLMQKIKLQR----GKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQ--NGKVKLGDFGSAR 148 (255)
T ss_pred EEEeeCCCCcHHHHHHhcc----CCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECC--CCcEEEcccCcce
Confidence 99999975 6776665322 123789999999999999999999999999999999999986 7789999999987
Q ss_pred cccCC---ccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhh
Q 004954 572 FQTDN---LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQ 648 (722)
Q Consensus 572 ~~~~~---~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~ 648 (722)
..... .....+++.|+|||++.+..++.++|+||||+++|+|++|..||...+.......+....
T Consensus 149 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~------------ 216 (255)
T cd08219 149 LLTSPGAYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGS------------ 216 (255)
T ss_pred eecccccccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCC------------
Confidence 55432 223568889999999999889999999999999999999999998766555444332100
Q ss_pred hhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhC
Q 004954 649 EIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 715 (722)
Q Consensus 649 ~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~H 715 (722)
...+| ...+..+.+||++||+.||++|||+.++|.-
T Consensus 217 ----------------------~~~~~---------~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 217 ----------------------YKPLP---------SHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred ----------------------CCCCC---------cccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 00011 1123558899999999999999999999864
No 221
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=7.6e-35 Score=302.74 Aligned_cols=243 Identities=28% Similarity=0.436 Sum_probs=197.0
Q ss_pred eccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEEEc
Q 004954 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCEL 497 (722)
Q Consensus 422 LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~----~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~iVmEy 497 (722)
||.|++|.||++++..+++.+|+|++.... .....+.+|+.+++.++ ||||+++++.+......++||||
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~~~lv~e~ 74 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECN------HPFIVKLYRTFKDKKYIYMLMEY 74 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCC------CCCEeeeeeeEEcCCccEEEEec
Confidence 799999999999999999999999987532 23455677777777664 78999999999999999999999
Q ss_pred ccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCcccccCC
Q 004954 498 LRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDN 576 (722)
Q Consensus 498 ~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~~~ 576 (722)
+.+ +|.+++.... .+++..+..++.||+.||+|||+.+++|+||+|+||+++. ++.++|+|||++......
T Consensus 75 ~~~~~L~~~l~~~~------~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~--~~~~~l~df~~~~~~~~~ 146 (262)
T cd05572 75 CLGGELWTILRDRG------LFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDS--NGYVKLVDFGFAKKLKSG 146 (262)
T ss_pred CCCCcHHHHHhhcC------CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcC--CCCEEEeeCCcccccCcc
Confidence 974 6777665432 2888999999999999999999999999999999999986 788999999998765543
Q ss_pred --ccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCh--HHHHHHHHHhhcCCCcHHHHhhhhhhhh
Q 004954 577 --LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDA--VVMILARIIGMLGPIDLEMLMQGQEIYK 652 (722)
Q Consensus 577 --~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~--~~e~l~~i~~~lg~~~~~~~~~~~~~~~ 652 (722)
.....+++.|+|||.+.+..++.++|+||||+++|+|++|..||.... ....+..+....
T Consensus 147 ~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~---------------- 210 (262)
T cd05572 147 QKTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGN---------------- 210 (262)
T ss_pred cccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccC----------------
Confidence 233567889999999988889999999999999999999999997654 333333322100
Q ss_pred hhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcC-----HHHHHhCCCCCC
Q 004954 653 YFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPT-----AREALDHPWLQH 720 (722)
Q Consensus 653 ~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpT-----a~ElL~HPwf~~ 720 (722)
.....|. ..+..+.++|.+||+.+|++||+ +.|+++||||++
T Consensus 211 -----------------~~~~~~~---------~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~ 257 (262)
T cd05572 211 -----------------GKLEFPN---------YIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNG 257 (262)
T ss_pred -----------------CCCCCCc---------ccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhhC
Confidence 0001111 11467899999999999999999 999999999974
No 222
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=9.4e-35 Score=301.06 Aligned_cols=250 Identities=32% Similarity=0.463 Sum_probs=204.3
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~--~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (722)
++|++.+.||+|++|.||++++..+++.+++|++.... .....+.+|+.++..++ |+||+++++++......
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~ 74 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCE------SPYVVKCYGAFYKEGEI 74 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcC------CCCeeeEEEEEccCCeE
Confidence 36899999999999999999999999999999987653 23466777888887775 68999999999999999
Q ss_pred EEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHH-CCCccccCCCCceEEcccCCCeEEEEecCC
Q 004954 492 FIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS-LGIIHCDLKPENILIKSYQRCEIKIIDLGS 569 (722)
Q Consensus 492 ~iVmEy~~-gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs-~gIvHrDLKp~NILl~~~~~~~vkL~DFGl 569 (722)
++||||+. ++|.+++... ..+++..++.++.|++.||+|||+ .+++|+||+|+||+++. ++.++|+|||.
T Consensus 75 ~lv~e~~~~~~L~~~l~~~------~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~--~~~~~l~df~~ 146 (264)
T cd06623 75 SIVLEYMDGGSLADLLKKV------GKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINS--KGEVKIADFGI 146 (264)
T ss_pred EEEEEecCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECC--CCCEEEccCcc
Confidence 99999998 5677776543 238999999999999999999999 99999999999999986 78899999998
Q ss_pred cccccCCcc---ccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCh---HHHHHHHHHhhcCCCcHHH
Q 004954 570 SCFQTDNLC---LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDA---VVMILARIIGMLGPIDLEM 643 (722)
Q Consensus 570 s~~~~~~~~---~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~---~~e~l~~i~~~lg~~~~~~ 643 (722)
+........ ...++..|+|||.+.+..++.++|+||||+++|+|++|..||.... ..+....+...
T Consensus 147 ~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~-------- 218 (264)
T cd06623 147 SKVLENTLDQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDG-------- 218 (264)
T ss_pred ceecccCCCcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcC--------
Confidence 876543222 3467889999999999889999999999999999999999997653 22222222100
Q ss_pred HhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhccc-CcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCCC
Q 004954 644 LMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQF-SDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 720 (722)
Q Consensus 644 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~-~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~~ 720 (722)
..+. .... .+..+.++|.+||..+|++|||+.++|+||||+.
T Consensus 219 -----------------------------~~~~------~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~~~~~~ 261 (264)
T cd06623 219 -----------------------------PPPS------LPAEEFSPEFRDFISACLQKDPKKRPSAAELLQHPFIKK 261 (264)
T ss_pred -----------------------------CCCC------CCcccCCHHHHHHHHHHccCChhhCCCHHHHHhCHHHHh
Confidence 0000 0011 3467899999999999999999999999999975
No 223
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=7.6e-35 Score=305.23 Aligned_cols=253 Identities=28% Similarity=0.453 Sum_probs=202.4
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEE
Q 004954 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF 492 (722)
Q Consensus 415 rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~--~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~ 492 (722)
.|++.+.||+|+||.||+|.+..+++.+|+|++... ......+.+|+.+++.++. ..||||+++++++......+
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~---~~~~~vi~~~~~~~~~~~~~ 78 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQ---SQPPNITKYYGSYLKGPRLW 78 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhcc---CCCCCeeeEeeeeeeCCEEE
Confidence 478889999999999999999999999999998653 3344567789999998875 35899999999999999999
Q ss_pred EEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCcc
Q 004954 493 IVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 571 (722)
Q Consensus 493 iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~ 571 (722)
+||||+.+ +|.+++... .+++..++.++.|++.||.|||+.||+|+||+|+||+++. ++.++|+|||++.
T Consensus 79 lv~e~~~~~~L~~~~~~~-------~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~--~~~~~l~dfg~~~ 149 (277)
T cd06917 79 IIMEYAEGGSVRTLMKAG-------PIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTN--TGNVKLCDFGVAA 149 (277)
T ss_pred EEEecCCCCcHHHHHHcc-------CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcC--CCCEEEccCCcee
Confidence 99999976 565554321 3889999999999999999999999999999999999996 7889999999987
Q ss_pred cccCC---ccccccCCcccCchhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 004954 572 FQTDN---LCLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 647 (722)
Q Consensus 572 ~~~~~---~~~~~gt~~y~APE~l~~-~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~ 647 (722)
..... .....++..|+|||.+.+ ..++.++|+|||||++|+|++|..||.+.........+...
T Consensus 150 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~------------ 217 (277)
T cd06917 150 LLNQNSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKS------------ 217 (277)
T ss_pred ecCCCccccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccccC------------
Confidence 65433 223467889999999865 45789999999999999999999999765432221111000
Q ss_pred hhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCCCC
Q 004954 648 QEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQHP 721 (722)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~~~ 721 (722)
....++. ...+..+.++|.+||+.||.+||++.++++||||++.
T Consensus 218 ----------------------~~~~~~~--------~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~~~~~ 261 (277)
T cd06917 218 ----------------------KPPRLED--------NGYSKLLREFVAACLDEEPKERLSAEELLKSKWIKAH 261 (277)
T ss_pred ----------------------CCCCCCc--------ccCCHHHHHHHHHHcCCCcccCcCHHHHhhChHhhcc
Confidence 0000000 0124568899999999999999999999999999764
No 224
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=7.9e-35 Score=307.16 Aligned_cols=246 Identities=24% Similarity=0.375 Sum_probs=189.4
Q ss_pred EeccCCCCceEEEEECCCCcEEEEEEeecchh----hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEEE
Q 004954 421 YLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD----FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCE 496 (722)
Q Consensus 421 ~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~----~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~iVmE 496 (722)
.||+|+||.||++.+..+++.+|+|++..... ......+|..+++.+.. ..|++|+.+++.+...+..++|||
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~~~~lv~e 77 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST---GDCPFIVCMTYAFHTPDKLCFILD 77 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhh---CCCCcEeEEEEEEecCCeEEEEEe
Confidence 38999999999999999999999998865321 12233445555555543 358999999999999999999999
Q ss_pred cccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCcccccC
Q 004954 497 LLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTD 575 (722)
Q Consensus 497 y~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~~ 575 (722)
|+.+ +|..++.... .+++..+..++.||+.||.|||+.+|+|+||||+|||++. ++.++|+|||++.....
T Consensus 78 ~~~~~~L~~~i~~~~------~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~--~~~~~l~dfg~~~~~~~ 149 (279)
T cd05633 78 LMNGGDLHYHLSQHG------VFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDE--HGHVRISDLGLACDFSK 149 (279)
T ss_pred cCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECC--CCCEEEccCCcceeccc
Confidence 9986 4555544221 3899999999999999999999999999999999999985 77899999999865433
Q ss_pred C-ccccccCCcccCchhhc-CCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHH--HHHHHHhhcCCCcHHHHhhhhhhh
Q 004954 576 N-LCLYVQSRSYRAPEVII-GLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVM--ILARIIGMLGPIDLEMLMQGQEIY 651 (722)
Q Consensus 576 ~-~~~~~gt~~y~APE~l~-~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e--~l~~i~~~lg~~~~~~~~~~~~~~ 651 (722)
. .....+++.|+|||.+. +..++.++||||+||++|+|++|..||....... .+..+.
T Consensus 150 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~------------------ 211 (279)
T cd05633 150 KKPHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMT------------------ 211 (279)
T ss_pred cCccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHh------------------
Confidence 2 23346899999999986 4568899999999999999999999996532111 111100
Q ss_pred hhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCc-----CHHHHHhCCCCCC
Q 004954 652 KYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRP-----TAREALDHPWLQH 720 (722)
Q Consensus 652 ~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRp-----Ta~ElL~HPwf~~ 720 (722)
......+| ...+..+.++|++||+.||++|| |++|+++||||+.
T Consensus 212 ----------------~~~~~~~~---------~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~ 260 (279)
T cd05633 212 ----------------LTVNVELP---------DSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKG 260 (279)
T ss_pred ----------------hcCCcCCc---------cccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccC
Confidence 00000111 11345688999999999999999 6999999999975
No 225
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=7e-35 Score=305.62 Aligned_cols=248 Identities=26% Similarity=0.348 Sum_probs=193.2
Q ss_pred CcEEEEEEe--ccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 004954 414 GRYYVTEYL--GSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (722)
Q Consensus 414 ~rY~i~~~L--G~G~fG~Vy~a~d~~tg~~vAvKil~~~~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (722)
++|.+.+.+ |+|+||.||++.++.+++.+|+|++...... ..|..+...+. .|+||+++++.|...+..
T Consensus 14 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~----~~e~~~~~~~~-----~h~~iv~~~~~~~~~~~~ 84 (267)
T PHA03390 14 KNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFN----AIEPMVHQLMK-----DNPNFIKLYYSVTTLKGH 84 (267)
T ss_pred HhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcc----hhhHHHHHHhh-----cCCCEEEEEEEEecCCee
Confidence 456666665 9999999999999999999999998754211 11233322222 489999999999999999
Q ss_pred EEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCC-eEEEEecCC
Q 004954 492 FIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRC-EIKIIDLGS 569 (722)
Q Consensus 492 ~iVmEy~~-gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~-~vkL~DFGl 569 (722)
++||||++ ++|.+++.... .+++..++.++.||+.||.|||+.|++||||||+||+++. ++ .++|+|||+
T Consensus 85 ~iv~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~--~~~~~~l~dfg~ 156 (267)
T PHA03390 85 VLIMDYIKDGDLFDLLKKEG------KLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDR--AKDRIYLCDYGL 156 (267)
T ss_pred EEEEEcCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeC--CCCeEEEecCcc
Confidence 99999997 57877776432 3899999999999999999999999999999999999986 45 899999999
Q ss_pred cccccCCccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHH-HHHHhhcCCCcHHHHhhhh
Q 004954 570 SCFQTDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMIL-ARIIGMLGPIDLEMLMQGQ 648 (722)
Q Consensus 570 s~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l-~~i~~~lg~~~~~~~~~~~ 648 (722)
+....... ...++..|+|||++.+..++.++|+||||+++|+|++|..||........- ..+...
T Consensus 157 ~~~~~~~~-~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~------------- 222 (267)
T PHA03390 157 CKIIGTPS-CYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKR------------- 222 (267)
T ss_pred ceecCCCc-cCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHh-------------
Confidence 87654332 346889999999999989999999999999999999999999754322210 110000
Q ss_pred hhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcC-HHHHHhCCCCCC
Q 004954 649 EIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPT-AREALDHPWLQH 720 (722)
Q Consensus 649 ~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpT-a~ElL~HPwf~~ 720 (722)
.....+ .....++.+.+||.+||+.+|.+||+ .+++|+||||++
T Consensus 223 ---------------------~~~~~~-------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~~~~~ 267 (267)
T PHA03390 223 ---------------------QQKKLP-------FIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKHPFLKI 267 (267)
T ss_pred ---------------------hcccCC-------cccccCHHHHHHHHHHhccChhhCCchHHHHhcCCcccC
Confidence 000000 01134567899999999999999996 599999999974
No 226
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=1.2e-34 Score=303.03 Aligned_cols=252 Identities=29% Similarity=0.456 Sum_probs=196.1
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchh-----------hhHhHHHHHHHHHHhcccCCCCCCceeEEEE
Q 004954 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD-----------FFDQSLDEIKLLKLVNKNDPADEHHILRLYD 483 (722)
Q Consensus 415 rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~-----------~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~ 483 (722)
+|.+.+.||.|+||.||+|.+..+|+.+|+|.++.... ..+.+.+|+.+++.++ |+||+++++
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~ 75 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLD------HLNIVQYLG 75 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcC------CCCcceEEE
Confidence 68899999999999999999988999999998864211 1223456666666664 789999999
Q ss_pred EEEecCeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeE
Q 004954 484 YFYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI 562 (722)
Q Consensus 484 ~f~~~~~l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~v 562 (722)
++...+..++||||+.+ +|.+.+... ..++...+..++.||+.||.|||+.+++|+||+|+||+++. ++.+
T Consensus 76 ~~~~~~~~~lv~e~~~~~~L~~~l~~~------~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~--~~~~ 147 (272)
T cd06629 76 FETTEEYLSIFLEYVPGGSIGSCLRTY------GRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDA--DGIC 147 (272)
T ss_pred EeccCCceEEEEecCCCCcHHHHHhhc------cCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcC--CCeE
Confidence 99999999999999975 566665533 23888999999999999999999999999999999999985 7899
Q ss_pred EEEecCCcccccCC-----ccccccCCcccCchhhcCCC--CCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhh
Q 004954 563 KIIDLGSSCFQTDN-----LCLYVQSRSYRAPEVIIGLP--YDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGM 635 (722)
Q Consensus 563 kL~DFGls~~~~~~-----~~~~~gt~~y~APE~l~~~~--~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~ 635 (722)
+|+|||++...... .....++..|+|||.+.... ++.++|+||||+++|++++|..||......+.+..+...
T Consensus 148 ~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~ 227 (272)
T cd06629 148 KISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNK 227 (272)
T ss_pred EEeeccccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhcc
Confidence 99999998654322 12245788999999987654 789999999999999999999999765443322221100
Q ss_pred cCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhC
Q 004954 636 LGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 715 (722)
Q Consensus 636 lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~H 715 (722)
.....++.. .....+..+.+||.+||..+|.+|||+.++|+|
T Consensus 228 ---------------------------------~~~~~~~~~-----~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 228 ---------------------------------RSAPPIPPD-----VSMNLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred ---------------------------------ccCCcCCcc-----ccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 000011110 011234678999999999999999999999999
Q ss_pred CCC
Q 004954 716 PWL 718 (722)
Q Consensus 716 Pwf 718 (722)
|||
T Consensus 270 ~~~ 272 (272)
T cd06629 270 PFI 272 (272)
T ss_pred CCC
Confidence 997
No 227
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=4.9e-35 Score=305.85 Aligned_cols=248 Identities=30% Similarity=0.482 Sum_probs=203.3
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~----~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (722)
++|.+.+.||+|+||.||++++..+|+.+|+|++.... .....+.+|..+++.+. .|+||+++++++...+
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~-----~~~~i~~~~~~~~~~~ 75 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLN-----GHPGIIKLYYTFQDEE 75 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcc-----cCCCchhHHHHhcCCc
Confidence 47999999999999999999999999999999987532 22345667777777765 3789999999999999
Q ss_pred eEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecC
Q 004954 490 HLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (722)
Q Consensus 490 ~l~iVmEy~~-gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFG 568 (722)
..++||||+. ++|.+++.... .+++..++.++.|++.||.+||+.|++|+||+|+||+++. ++.++|+|||
T Consensus 76 ~~~lv~e~~~~~~L~~~l~~~~------~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~--~~~~~l~df~ 147 (280)
T cd05581 76 NLYFVLEYAPNGELLQYIRKYG------SLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDK--DMHIKITDFG 147 (280)
T ss_pred eEEEEEcCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECC--CCCEEecCCc
Confidence 9999999995 67777776432 3899999999999999999999999999999999999985 7889999999
Q ss_pred CcccccCCc-----------------------cccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChH
Q 004954 569 SSCFQTDNL-----------------------CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAV 625 (722)
Q Consensus 569 ls~~~~~~~-----------------------~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~ 625 (722)
++....... ....++..|+|||++.+..++.++|+||||++++++++|+.||.....
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~ 227 (280)
T cd05581 148 TAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNE 227 (280)
T ss_pred cccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccH
Confidence 886544322 123567889999999988899999999999999999999999987764
Q ss_pred HHHHHHHHhhcCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCC
Q 004954 626 VMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQR 705 (722)
Q Consensus 626 ~e~l~~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~k 705 (722)
...+..+... ...+|. ..++.+.+||++||+.+|.+
T Consensus 228 ~~~~~~~~~~-----------------------------------~~~~~~---------~~~~~~~~li~~~l~~~p~~ 263 (280)
T cd05581 228 YLTFQKILKL-----------------------------------EYSFPP---------NFPPDAKDLIEKLLVLDPQD 263 (280)
T ss_pred HHHHHHHHhc-----------------------------------CCCCCC---------ccCHHHHHHHHHHhcCCHhh
Confidence 4444333211 111111 12456889999999999999
Q ss_pred CcCH----HHHHhCCCC
Q 004954 706 RPTA----REALDHPWL 718 (722)
Q Consensus 706 RpTa----~ElL~HPwf 718 (722)
|||+ .++|+||||
T Consensus 264 R~~~~~~~~~ll~~~~~ 280 (280)
T cd05581 264 RLGVNEGYDELKAHPFF 280 (280)
T ss_pred CCCcccCHHHHhcCCCC
Confidence 9999 999999998
No 228
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=8.2e-35 Score=305.82 Aligned_cols=249 Identities=28% Similarity=0.410 Sum_probs=199.9
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~--~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (722)
..|++++.||.|+||.||+|.+..+++.+|+|++.... .....+.+|+.+++.+. |+||+++++++......
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~~ 77 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCD------SPYVTKYYGSYLKGTKL 77 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCC------CCCEeeEEEEEEECCEE
Confidence 46888899999999999999999999999999987542 33455667777777664 78999999999999999
Q ss_pred EEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCc
Q 004954 492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (722)
Q Consensus 492 ~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 570 (722)
++||||+.+ +|.+.+... .+++..+..++.|++.||+|||+.+++|+||+|+||+++. ++.++|+|||++
T Consensus 78 ~lv~e~~~~~~L~~~i~~~-------~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~--~~~~~l~dfg~~ 148 (277)
T cd06640 78 WIIMEYLGGGSALDLLRAG-------PFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSE--QGDVKLADFGVA 148 (277)
T ss_pred EEEEecCCCCcHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcC--CCCEEEcccccc
Confidence 999999976 666655421 2788899999999999999999999999999999999986 778999999998
Q ss_pred ccccCC---ccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 004954 571 CFQTDN---LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 647 (722)
Q Consensus 571 ~~~~~~---~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~ 647 (722)
...... .....++..|+|||.+.+..++.++|+|||||++|+|++|..||...........+....
T Consensus 149 ~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~----------- 217 (277)
T cd06640 149 GQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNN----------- 217 (277)
T ss_pred eeccCCccccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhcCC-----------
Confidence 654432 222457888999999998889999999999999999999999997655433322211000
Q ss_pred hhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCCC
Q 004954 648 QEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 720 (722)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~~ 720 (722)
...++ ...+..+.+||.+||+.+|++||++.++++||||..
T Consensus 218 -----------------------~~~~~---------~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 258 (277)
T cd06640 218 -----------------------PPTLT---------GEFSKPFKEFIDACLNKDPSFRPTAKELLKHKFIVK 258 (277)
T ss_pred -----------------------CCCCc---------hhhhHHHHHHHHHHcccCcccCcCHHHHHhChHhhh
Confidence 00000 112355789999999999999999999999999965
No 229
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-36 Score=325.50 Aligned_cols=250 Identities=25% Similarity=0.403 Sum_probs=210.6
Q ss_pred EEEEEEeccCCCCceEEEEECCCCcEEEEEEeec----chhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 004954 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKN----DKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (722)
Q Consensus 416 Y~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~----~~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (722)
|.=++-||+|+||-||-|+|..+.+.||||.+.- .......++.|+++|+.++ |||++.+.++|......
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~------HPntieYkgCyLre~Ta 101 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLR------HPNTIEYKGCYLREHTA 101 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhcc------CCCcccccceeeccchH
Confidence 4445569999999999999999999999998853 3445577889999999886 78999999999999999
Q ss_pred EEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCcc
Q 004954 492 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 571 (722)
Q Consensus 492 ~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~ 571 (722)
|+|||||-|+-.+++...... +.+.++..|..+.+.||+|||+.+.||||||..|||++. .+.|||+|||.+.
T Consensus 102 WLVMEYClGSAsDlleVhkKp-----lqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse--~g~VKLaDFGSAs 174 (948)
T KOG0577|consen 102 WLVMEYCLGSASDLLEVHKKP-----LQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSE--PGLVKLADFGSAS 174 (948)
T ss_pred HHHHHHHhccHHHHHHHHhcc-----chHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecC--CCeeeeccccchh
Confidence 999999999877777765543 889999999999999999999999999999999999995 8999999999987
Q ss_pred cccCCccccccCCcccCchhhcC---CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhh
Q 004954 572 FQTDNLCLYVQSRSYRAPEVIIG---LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQ 648 (722)
Q Consensus 572 ~~~~~~~~~~gt~~y~APE~l~~---~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~ 648 (722)
... +...++|||.|||||+++. +.|+-++||||||++..||...++|+-+.+....+..|...-.|.
T Consensus 175 i~~-PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNesPt--------- 244 (948)
T KOG0577|consen 175 IMA-PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPT--------- 244 (948)
T ss_pred hcC-chhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcCCCC---------
Confidence 544 4566899999999999973 569999999999999999999999998877766666664221110
Q ss_pred hhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCCCC
Q 004954 649 EIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQHP 721 (722)
Q Consensus 649 ~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~~~ 721 (722)
++ ....+..|++||..||+.-|..|||++++|.|+|....
T Consensus 245 -------------------------Lq--------s~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~fv~R~ 284 (948)
T KOG0577|consen 245 -------------------------LQ--------SNEWSDYFRNFVDSCLQKIPQERPTSEELLKHRFVLRE 284 (948)
T ss_pred -------------------------CC--------CchhHHHHHHHHHHHHhhCcccCCcHHHHhhcchhccC
Confidence 00 01123568999999999999999999999999998653
No 230
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=1.9e-34 Score=300.63 Aligned_cols=249 Identities=27% Similarity=0.399 Sum_probs=195.8
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch------hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK------DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 487 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~------~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~ 487 (722)
.+|++.++||+|+||.||++.+..+|+.||||.+.... .....+.+|+.+++.+. ||||+++++++..
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~------h~~i~~~~~~~~~ 75 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLL------HERIVQYYGCLRD 75 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcC------CCCeeeEEeEecc
Confidence 47999999999999999999999999999999886421 22345667888888774 7899999999876
Q ss_pred c--CeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEE
Q 004954 488 L--EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKI 564 (722)
Q Consensus 488 ~--~~l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL 564 (722)
. ..+++||||+++ +|.+++.... .+++..+..++.|++.||.|||+.+|+|+||||+||+++. ++.++|
T Consensus 76 ~~~~~~~~v~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~--~~~~~l 147 (265)
T cd06652 76 PMERTLSIFMEHMPGGSIKDQLKSYG------ALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDS--VGNVKL 147 (265)
T ss_pred CCCceEEEEEEecCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecC--CCCEEE
Confidence 4 568899999975 6766655322 2788889999999999999999999999999999999985 788999
Q ss_pred EecCCcccccC------CccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCC
Q 004954 565 IDLGSSCFQTD------NLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGP 638 (722)
Q Consensus 565 ~DFGls~~~~~------~~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~ 638 (722)
+|||++..... ......++..|+|||++.+..++.++|+|||||++|+|++|+.||..........++....
T Consensus 148 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~-- 225 (265)
T cd06652 148 GDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQP-- 225 (265)
T ss_pred CcCccccccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhcCC--
Confidence 99998865432 1223457889999999998889999999999999999999999997654333332221000
Q ss_pred CcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCC
Q 004954 639 IDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 718 (722)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf 718 (722)
....+| ...+..+.++|++||. +|++||+++++++|||+
T Consensus 226 -------------------------------~~~~~~---------~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~~~~ 264 (265)
T cd06652 226 -------------------------------TNPVLP---------PHVSDHCRDFLKRIFV-EAKLRPSADELLRHTFV 264 (265)
T ss_pred -------------------------------CCCCCc---------hhhCHHHHHHHHHHhc-ChhhCCCHHHHhcCccc
Confidence 000011 1123457899999994 99999999999999998
Q ss_pred C
Q 004954 719 Q 719 (722)
Q Consensus 719 ~ 719 (722)
.
T Consensus 265 ~ 265 (265)
T cd06652 265 H 265 (265)
T ss_pred C
Confidence 4
No 231
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=1.8e-34 Score=296.81 Aligned_cols=251 Identities=29% Similarity=0.443 Sum_probs=206.0
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 004954 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (722)
Q Consensus 415 rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~---~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (722)
+|++.+.||+|+||.||++.+..+++.+|+|++.... .....+.+|+++++.++ |+|++++++.+......
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~------~~~~~~~~~~~~~~~~~ 74 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLN------HPNIIKYYESFEEKGKL 74 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcC------CCChhheEEEEecCCEE
Confidence 5899999999999999999999899999999987542 34456777888887775 67999999999999999
Q ss_pred EEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCc
Q 004954 492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (722)
Q Consensus 492 ~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 570 (722)
++||||+++ +|.+.+..... ....+++..+..++.|++.||.+||+.|++|+||+|+||+++. ++.++|+|||.+
T Consensus 75 ~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~--~~~~~l~d~~~~ 150 (258)
T cd08215 75 CIVMEYADGGDLSQKIKKQKK--EGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTS--NGLVKLGDFGIS 150 (258)
T ss_pred EEEEEecCCCcHHHHHHHhhc--cCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcC--CCcEEECCccce
Confidence 999999985 67776664431 1234899999999999999999999999999999999999995 788999999998
Q ss_pred ccccCCc---cccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 004954 571 CFQTDNL---CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 647 (722)
Q Consensus 571 ~~~~~~~---~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~ 647 (722)
....... ....+++.|+|||.+.+..++.++|+||+|+++|+|++|..||.......+...+.....
T Consensus 151 ~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~---------- 220 (258)
T cd08215 151 KVLSSTVDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQY---------- 220 (258)
T ss_pred eecccCcceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCCC----------
Confidence 7654432 234678899999999998899999999999999999999999987665544444321100
Q ss_pred hhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCC
Q 004954 648 QEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 718 (722)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf 718 (722)
..+|. ..+..+.++|++||..+|++|||+.++|+||||
T Consensus 221 ------------------------~~~~~---------~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 258 (258)
T cd08215 221 ------------------------PPIPS---------QYSSELRNLVSSLLQKDPEERPSIAQILQSPFI 258 (258)
T ss_pred ------------------------CCCCC---------CCCHHHHHHHHHHcCCChhhCcCHHHHhcCCCC
Confidence 00111 224568899999999999999999999999997
No 232
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=1.9e-34 Score=299.02 Aligned_cols=244 Identities=23% Similarity=0.348 Sum_probs=197.5
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEE
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFI 493 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~i 493 (722)
++|++.+.||+|+||.||++.++ .+..+|+|.+.........+.+|+.+++.++ ||||+++++++...+..++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~~~i 76 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWR-AQIKVAIKAINEGAMSEEDFIEEAKVMMKLS------HPKLVQLYGVCTQQKPLYI 76 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEec-cCceEEEEecccCCccHHHHHHHHHHHHHCC------CCCceeEEEEEccCCCEEE
Confidence 46899999999999999999864 4568999998765544567788999998885 6899999999999999999
Q ss_pred EEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCccc
Q 004954 494 VCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF 572 (722)
Q Consensus 494 VmEy~~-gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~ 572 (722)
||||+. ++|.+.+..... .+++..+..++.|++.||.|||+.||+|+||||+||+++. ++.++|+|||.+..
T Consensus 77 v~e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~--~~~~kl~d~g~~~~ 149 (256)
T cd05114 77 VTEFMENGCLLNYLRQRQG-----KLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSS--TGVVKVSDFGMTRY 149 (256)
T ss_pred EEEcCCCCcHHHHHHhCcc-----CCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcC--CCeEEECCCCCccc
Confidence 999997 467666653221 2788999999999999999999999999999999999985 78899999998875
Q ss_pred ccCCcc----ccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 004954 573 QTDNLC----LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 647 (722)
Q Consensus 573 ~~~~~~----~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~ 647 (722)
...... ...++..|+|||++.+..++.++|+||||+++|+|++ |+.||...+..+.+..+.....
T Consensus 150 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~---------- 219 (256)
T cd05114 150 VLDDEYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFR---------- 219 (256)
T ss_pred cCCCceeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCC----------
Confidence 432211 1234567999999998899999999999999999999 9999988776666555432100
Q ss_pred hhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHh
Q 004954 648 QEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 714 (722)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~ 714 (722)
...| ...+..+.+||.+||+.+|.+||++.++++
T Consensus 220 ------------------------~~~~---------~~~~~~~~~li~~c~~~~p~~Rps~~~l~~ 253 (256)
T cd05114 220 ------------------------LYRP---------KLASMTVYEVMYSCWHEKPEGRPTFAELLR 253 (256)
T ss_pred ------------------------CCCC---------CCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 0001 112356889999999999999999999986
No 233
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=1.6e-34 Score=299.64 Aligned_cols=249 Identities=32% Similarity=0.501 Sum_probs=199.4
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchh---hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 004954 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (722)
Q Consensus 415 rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~---~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (722)
||++.+.||+|+||.||++.+..+++.+|+|+++.... ....+.+|+.+++.++ |+||+++++.+...+..
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~------~~~i~~~~~~~~~~~~~ 74 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLK------HPNLVKYYGVEVHREKV 74 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCC------CCChhheeeeEecCCEE
Confidence 69999999999999999999988999999999876543 4566778888888775 67999999999999999
Q ss_pred EEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCc
Q 004954 492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (722)
Q Consensus 492 ~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 570 (722)
++|+||+.+ +|.+.+... ..+++..++.++.|++.||.|||+.||+|+||+|+||+++. ++.+||+|||++
T Consensus 75 ~lv~e~~~~~~L~~~~~~~------~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~--~~~~kl~d~g~~ 146 (264)
T cd06626 75 YIFMEYCSGGTLEELLEHG------RILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDH--NGVIKLGDFGCA 146 (264)
T ss_pred EEEEecCCCCcHHHHHhhc------CCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC--CCCEEEcccccc
Confidence 999999985 566655432 12788899999999999999999999999999999999996 788999999998
Q ss_pred ccccCCcc-------ccccCCcccCchhhcCCC---CCchhhHHHHHHHHHHHHhCCCCCCCChH-HHHHHHHHhhcCCC
Q 004954 571 CFQTDNLC-------LYVQSRSYRAPEVIIGLP---YDQKIDLWSLGCILAELWTGEVLFPNDAV-VMILARIIGMLGPI 639 (722)
Q Consensus 571 ~~~~~~~~-------~~~gt~~y~APE~l~~~~---~s~ksDIWSLGviL~elltG~~PF~~~~~-~e~l~~i~~~lg~~ 639 (722)
........ ...+++.|+|||.+.+.. ++.++||||||+++|+|++|+.||..... ......+.. +
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~--~-- 222 (264)
T cd06626 147 VKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGA--G-- 222 (264)
T ss_pred cccCCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhc--C--
Confidence 76543221 245678999999998766 88999999999999999999999975422 222211110 0
Q ss_pred cHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCC
Q 004954 640 DLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 718 (722)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf 718 (722)
....+|.. ...+..+.+||++||+.+|.+|||+.+++.|||+
T Consensus 223 ------------------------------~~~~~~~~-------~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~ 264 (264)
T cd06626 223 ------------------------------HKPPIPDS-------LQLSPEGKDFLDRCLESDPKKRPTASELLQHPFV 264 (264)
T ss_pred ------------------------------CCCCCCcc-------cccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 00111111 1124568899999999999999999999999997
No 234
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=6.1e-35 Score=307.90 Aligned_cols=264 Identities=24% Similarity=0.326 Sum_probs=201.2
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCe
Q 004954 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 490 (722)
Q Consensus 413 ~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~--~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~ 490 (722)
.++|++++.||+|+||+||++.+..+|+.+|+|++... ......+.+|+++++.++ ||||+++++.+.....
T Consensus 4 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~------h~~i~~~~~~~~~~~~ 77 (284)
T cd06620 4 NEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECR------SPYIVSFYGAFLNENN 77 (284)
T ss_pred HHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcC------CCCcceEeeeEecCCE
Confidence 36789999999999999999999999999999988654 233456778888887764 6899999999999999
Q ss_pred EEEEEEccccc-hHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHH-CCCccccCCCCceEEcccCCCeEEEEecC
Q 004954 491 LFIVCELLRAN-LYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS-LGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (722)
Q Consensus 491 l~iVmEy~~gs-Ll~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs-~gIvHrDLKp~NILl~~~~~~~vkL~DFG 568 (722)
.++||||++++ |.+++... ..+++..++.++.|++.||.|||+ .+++|+||+|+||+++. ++.++|+|||
T Consensus 78 ~~lv~e~~~~~~L~~~~~~~------~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~--~~~~~l~d~g 149 (284)
T cd06620 78 ICMCMEFMDCGSLDRIYKKG------GPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNS--RGQIKLCDFG 149 (284)
T ss_pred EEEEEecCCCCCHHHHHHhc------cCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECC--CCcEEEccCC
Confidence 99999999864 54444332 138899999999999999999997 58999999999999985 7889999999
Q ss_pred CcccccCC-ccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 004954 569 SSCFQTDN-LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 647 (722)
Q Consensus 569 ls~~~~~~-~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~ 647 (722)
++...... .....++..|+|||++.+..++.++|||||||++|+|++|+.||............ +.....
T Consensus 150 l~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~-------~~~~~~-- 220 (284)
T cd06620 150 VSGELINSIADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDD-------PMGILD-- 220 (284)
T ss_pred cccchhhhccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhh-------hhHHHH--
Confidence 87654322 23356899999999998888999999999999999999999999765432110000 000000
Q ss_pred hhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCCCC
Q 004954 648 QEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQHP 721 (722)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~~~ 721 (722)
..+... ......++. ...+..+.+||.+||+.||.+|||+.|+++||||.+.
T Consensus 221 --~~~~~~------------~~~~~~~~~--------~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~ 272 (284)
T cd06620 221 --LLQQIV------------QEPPPRLPS--------SDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQA 272 (284)
T ss_pred --HHHHHh------------hccCCCCCc--------hhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence 000000 000000000 0123568899999999999999999999999999654
No 235
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=3.3e-35 Score=312.24 Aligned_cols=252 Identities=26% Similarity=0.424 Sum_probs=199.8
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch-hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEE
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF 492 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~-~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~ 492 (722)
+.|.....||+|+||.||++.+..++..||||.+.... .....+.+|+.+++.++ |+||+++++.+...+..+
T Consensus 22 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~------h~~ii~~~~~~~~~~~~~ 95 (292)
T cd06658 22 EYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYH------HENVVDMYNSYLVGDELW 95 (292)
T ss_pred HHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCC------CCcHHHHHHheecCCeEE
Confidence 45666678999999999999999999999999986533 23345667777777664 789999999999999999
Q ss_pred EEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCccc
Q 004954 493 IVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF 572 (722)
Q Consensus 493 iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~ 572 (722)
+||||+.++.+..+.... .+++..++.++.||+.||.|||+.||+||||||+||+++. ++.++|+|||++..
T Consensus 96 lv~e~~~~~~L~~~~~~~------~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~--~~~~kL~dfg~~~~ 167 (292)
T cd06658 96 VVMEFLEGGALTDIVTHT------RMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTS--DGRIKLSDFGFCAQ 167 (292)
T ss_pred EEEeCCCCCcHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcC--CCCEEEccCcchhh
Confidence 999999875443333221 2788999999999999999999999999999999999986 67899999998865
Q ss_pred ccCC---ccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhh
Q 004954 573 QTDN---LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQE 649 (722)
Q Consensus 573 ~~~~---~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~~ 649 (722)
.... .....+++.|+|||.+.+..++.++|+||||+++|+|++|+.||...+....+..+.....+
T Consensus 168 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~----------- 236 (292)
T cd06658 168 VSKEVPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPP----------- 236 (292)
T ss_pred cccccccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCC-----------
Confidence 4322 22356789999999999888999999999999999999999999876654444333211100
Q ss_pred hhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCCC
Q 004954 650 IYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 720 (722)
Q Consensus 650 ~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~~ 720 (722)
.++. ....+..+.+||.+||..||.+|||+.++|+||||+.
T Consensus 237 -----------------------~~~~-------~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~ 277 (292)
T cd06658 237 -----------------------RVKD-------SHKVSSVLRGFLDLMLVREPSQRATAQELLQHPFLKL 277 (292)
T ss_pred -----------------------cccc-------ccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhhc
Confidence 0000 0112456889999999999999999999999999975
No 236
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=5.4e-35 Score=311.41 Aligned_cols=251 Identities=25% Similarity=0.413 Sum_probs=197.7
Q ss_pred EEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch-hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEE
Q 004954 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIV 494 (722)
Q Consensus 416 Y~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~-~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~iV 494 (722)
|.....||+|+||.||++.+..+++.||+|++.... .....+.+|+.+++.+ .||||+++++.+...+..++|
T Consensus 23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l------~hp~i~~~~~~~~~~~~~~iv 96 (297)
T cd06659 23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDY------QHQNVVEMYKSYLVGEELWVL 96 (297)
T ss_pred HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhC------CCCchhhhhhheeeCCeEEEE
Confidence 334457999999999999999999999999986432 2234556677766665 478999999999999999999
Q ss_pred EEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCccccc
Q 004954 495 CELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT 574 (722)
Q Consensus 495 mEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~ 574 (722)
|||+.++.+..+... ..+++..++.++.|++.||.|||+.|++|+||||+||+++. ++.++|+|||++....
T Consensus 97 ~e~~~~~~L~~~~~~------~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~--~~~~kL~dfg~~~~~~ 168 (297)
T cd06659 97 MEFLQGGALTDIVSQ------TRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTL--DGRVKLSDFGFCAQIS 168 (297)
T ss_pred EecCCCCCHHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEcc--CCcEEEeechhHhhcc
Confidence 999986544333322 12889999999999999999999999999999999999985 7889999999886443
Q ss_pred CC---ccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhh
Q 004954 575 DN---LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIY 651 (722)
Q Consensus 575 ~~---~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~~~~ 651 (722)
.. .....+++.|+|||++.+..++.++|||||||++|+|++|+.||......+.+..+.... .+
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~--~~----------- 235 (297)
T cd06659 169 KDVPKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSP--PP----------- 235 (297)
T ss_pred cccccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccC--CC-----------
Confidence 22 223568899999999998889999999999999999999999997765544443332100 00
Q ss_pred hhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCCCC
Q 004954 652 KYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQHP 721 (722)
Q Consensus 652 ~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~~~ 721 (722)
........+..+.++|++||+.+|.+||++.++++||||.+.
T Consensus 236 ----------------------------~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~~~ 277 (297)
T cd06659 236 ----------------------------KLKNAHKISPVLRDFLERMLTREPQERATAQELLDHPFLLQT 277 (297)
T ss_pred ----------------------------CccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhChhhccC
Confidence 000011234568899999999999999999999999999765
No 237
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=2.9e-34 Score=303.66 Aligned_cols=259 Identities=21% Similarity=0.303 Sum_probs=199.8
Q ss_pred eecCcEEEEEEeccCCCCceEEEEECC-----CCcEEEEEEeecchh--hhHhHHHHHHHHHHhcccCCCCCCceeEEEE
Q 004954 411 VIAGRYYVTEYLGSAAFSKVFQAQDLH-----TGVDVCLKIIKNDKD--FFDQSLDEIKLLKLVNKNDPADEHHILRLYD 483 (722)
Q Consensus 411 ~l~~rY~i~~~LG~G~fG~Vy~a~d~~-----tg~~vAvKil~~~~~--~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~ 483 (722)
+..++|++.+.||+|+||.||+|.++. .+..||+|.+..... ....+.+|+.+++.+. ||||+++++
T Consensus 3 ~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~ 76 (288)
T cd05061 3 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFT------CHHVVRLLG 76 (288)
T ss_pred ccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCC------CCCeeeEEE
Confidence 456799999999999999999997542 355899998865432 2234556666666664 689999999
Q ss_pred EEEecCeEEEEEEccc-cchHHHHhhhhcc----CCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccC
Q 004954 484 YFYHLEHLFIVCELLR-ANLYEFQKFNQES----GGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQ 558 (722)
Q Consensus 484 ~f~~~~~l~iVmEy~~-gsLl~~l~~~~~~----~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~ 558 (722)
++...+..++||||+. ++|.+++...... .....++...+..++.||+.||.|||+++|+||||||+||+++.
T Consensus 77 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~-- 154 (288)
T cd05061 77 VVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAH-- 154 (288)
T ss_pred EEcCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcC--
Confidence 9999999999999997 5787777643221 11233567788999999999999999999999999999999996
Q ss_pred CCeEEEEecCCcccccCCc-----cccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHH
Q 004954 559 RCEIKIIDLGSSCFQTDNL-----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARI 632 (722)
Q Consensus 559 ~~~vkL~DFGls~~~~~~~-----~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~~i 632 (722)
++.++|+|||++....... ....++..|+|||.+.+..++.++|+|||||++|+|++ |..||.+....+....+
T Consensus 155 ~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~ 234 (288)
T cd05061 155 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFV 234 (288)
T ss_pred CCcEEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence 7889999999986543221 11234667999999998889999999999999999998 79999876665544433
Q ss_pred HhhcCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHH
Q 004954 633 IGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREA 712 (722)
Q Consensus 633 ~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~El 712 (722)
... + ....+ ...++.+.++|.+||+.||++|||+.++
T Consensus 235 ~~~-~---------------------------------~~~~~---------~~~~~~~~~li~~~l~~~p~~Rps~~~l 271 (288)
T cd05061 235 MDG-G---------------------------------YLDQP---------DNCPERVTDLMRMCWQFNPKMRPTFLEI 271 (288)
T ss_pred HcC-C---------------------------------CCCCC---------CCCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence 210 0 00001 1123568999999999999999999999
Q ss_pred Hh------CCCCCC
Q 004954 713 LD------HPWLQH 720 (722)
Q Consensus 713 L~------HPwf~~ 720 (722)
++ ||||+.
T Consensus 272 l~~l~~~~~~~~~~ 285 (288)
T cd05061 272 VNLLKDDLHPSFPE 285 (288)
T ss_pred HHHHHhhcCCCCCC
Confidence 97 999975
No 238
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=1.1e-34 Score=319.90 Aligned_cols=255 Identities=22% Similarity=0.341 Sum_probs=196.5
Q ss_pred eecCcEEEEEEeccCCCCceEEEEECCCC-----cEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEE
Q 004954 411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTG-----VDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYD 483 (722)
Q Consensus 411 ~l~~rY~i~~~LG~G~fG~Vy~a~d~~tg-----~~vAvKil~~~~--~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~ 483 (722)
.-.++|++.+.||+|+||.||++++...| ..||+|+++... .....+.+|+.+++.+. .|+||+++++
T Consensus 35 ~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~-----~h~nIv~~~~ 109 (374)
T cd05106 35 FPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLG-----QHKNIVNLLG 109 (374)
T ss_pred ccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhc-----cCCceeeEee
Confidence 34568999999999999999999864443 579999997532 33456778888888773 3789999999
Q ss_pred EEEecCeEEEEEEccc-cchHHHHhhhhcc--------------------------------------------------
Q 004954 484 YFYHLEHLFIVCELLR-ANLYEFQKFNQES-------------------------------------------------- 512 (722)
Q Consensus 484 ~f~~~~~l~iVmEy~~-gsLl~~l~~~~~~-------------------------------------------------- 512 (722)
++......++||||+. |+|.+++......
T Consensus 110 ~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (374)
T cd05106 110 ACTHGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSS 189 (374)
T ss_pred EecCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccc
Confidence 9999999999999997 5777776532210
Q ss_pred --------------CCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCcccccCCcc
Q 004954 513 --------------GGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLC 578 (722)
Q Consensus 513 --------------~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~~~~~ 578 (722)
.....+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||++........
T Consensus 190 ~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~--~~~~kL~DfGla~~~~~~~~ 267 (374)
T cd05106 190 SSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTD--GRVAKICDFGLARDIMNDSN 267 (374)
T ss_pred cccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeC--CCeEEEeeceeeeeccCCcc
Confidence 11124788899999999999999999999999999999999985 78899999999875433211
Q ss_pred -----ccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhhh
Q 004954 579 -----LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYK 652 (722)
Q Consensus 579 -----~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~~~~~ 652 (722)
...+++.|+|||++.+..++.++|||||||++|+|++ |+.||........+..+....
T Consensus 268 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~---------------- 331 (374)
T cd05106 268 YVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRG---------------- 331 (374)
T ss_pred eeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcc----------------
Confidence 1224567999999998899999999999999999997 999997654333222222100
Q ss_pred hhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHh
Q 004954 653 YFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 714 (722)
Q Consensus 653 ~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~ 714 (722)
.....| ...+..+.++|.+||+.||.+|||+.++++
T Consensus 332 -----------------~~~~~~---------~~~~~~l~~li~~cl~~dp~~RPs~~~l~~ 367 (374)
T cd05106 332 -----------------YQMSRP---------DFAPPEIYSIMKMCWNLEPTERPTFSQISQ 367 (374)
T ss_pred -----------------cCccCC---------CCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 000011 112467899999999999999999999986
No 239
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-35 Score=294.77 Aligned_cols=253 Identities=26% Similarity=0.377 Sum_probs=199.8
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch-hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec---
Q 004954 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL--- 488 (722)
Q Consensus 413 ~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~-~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~--- 488 (722)
.+||+|.+.||.|||+.||+++...+++.+|+|.+.... ......++|+...++++ ||||++++++....
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~------s~~vl~l~dh~l~~~~D 93 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFN------SPNVLRLVDHQLREEKD 93 (302)
T ss_pred CceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhC------CcchHHHHHHHHHhhcc
Confidence 579999999999999999999999999999999887544 56677888888888886 57999998876543
Q ss_pred --CeEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCC--CccccCCCCceEEcccCCCeEE
Q 004954 489 --EHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLG--IIHCDLKPENILIKSYQRCEIK 563 (722)
Q Consensus 489 --~~l~iVmEy~~-gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~g--IvHrDLKp~NILl~~~~~~~vk 563 (722)
...||+++|.. |+|++.+......+. .+++.++..|+.+|++||++||+.. ++||||||.|||++. .+.++
T Consensus 94 ~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~--~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~--~~~~v 169 (302)
T KOG2345|consen 94 GKHEAYLLLPYYKRGSLLDEIERLKIKGN--FVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSD--SGLPV 169 (302)
T ss_pred CceeEEEEeehhccccHHHHHHHHhhcCC--ccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecC--CCceE
Confidence 34899999986 779999887765543 3999999999999999999999998 999999999999995 78999
Q ss_pred EEecCCcccccCCcc------------ccccCCcccCchhhc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHH
Q 004954 564 IIDLGSSCFQTDNLC------------LYVQSRSYRAPEVII---GLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMI 628 (722)
Q Consensus 564 L~DFGls~~~~~~~~------------~~~gt~~y~APE~l~---~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~ 628 (722)
|.|||++....-... ...-|..|+|||.+. +...+.++|||||||+||.||.|..||..
T Consensus 170 l~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~------ 243 (302)
T KOG2345|consen 170 LMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFER------ 243 (302)
T ss_pred EEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchH------
Confidence 999999865332211 123478899999985 44578899999999999999999999942
Q ss_pred HHHHHhhcCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcC
Q 004954 629 LARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPT 708 (722)
Q Consensus 629 l~~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpT 708 (722)
+...-|. .-... ....+.+|.... .++.+.+||+.||+.||.+||+
T Consensus 244 ---~~~~GgS----------------------laLAv--~n~q~s~P~~~~-------yse~l~~lik~mlqvdP~qRP~ 289 (302)
T KOG2345|consen 244 ---IYQQGGS----------------------LALAV--QNAQISIPNSSR-------YSEALHQLIKSMLQVDPNQRPT 289 (302)
T ss_pred ---HhhcCCe----------------------EEEee--eccccccCCCCC-------ccHHHHHHHHHHhcCCcccCCC
Confidence 1111110 00000 111233343332 4577999999999999999999
Q ss_pred HHHHHhC
Q 004954 709 AREALDH 715 (722)
Q Consensus 709 a~ElL~H 715 (722)
+.+++.+
T Consensus 290 i~~ll~~ 296 (302)
T KOG2345|consen 290 IPELLSK 296 (302)
T ss_pred HHHHHHH
Confidence 9999975
No 240
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=1.7e-34 Score=304.34 Aligned_cols=245 Identities=24% Similarity=0.377 Sum_probs=190.1
Q ss_pred EeccCCCCceEEEEECCCCcEEEEEEeecchh----hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEEE
Q 004954 421 YLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD----FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCE 496 (722)
Q Consensus 421 ~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~----~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~iVmE 496 (722)
.||+|+||.||++.+..+++.||+|++..... .......|..+++.++. ..||+|+++++.+...+..++|||
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~~~~~v~e 77 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST---GDCPFIVCMSYAFHTPDKLSFILD 77 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHh---CCCCcEeeeeeeeecCCEEEEEEe
Confidence 38999999999999999999999999865321 11223455555555543 358999999999999999999999
Q ss_pred ccccc-hHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCcccccC
Q 004954 497 LLRAN-LYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTD 575 (722)
Q Consensus 497 y~~gs-Ll~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~~ 575 (722)
|+.|+ |...+... ..+++..++.++.|++.||.|||+.+|+||||||+||+++. ++.++|+|||++.....
T Consensus 78 ~~~g~~L~~~l~~~------~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~--~~~~kl~dfg~~~~~~~ 149 (278)
T cd05606 78 LMNGGDLHYHLSQH------GVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDE--HGHVRISDLGLACDFSK 149 (278)
T ss_pred cCCCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECC--CCCEEEccCcCccccCc
Confidence 99865 44444321 23899999999999999999999999999999999999986 77899999999865432
Q ss_pred -CccccccCCcccCchhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCChHH---HHHHHHHhhcCCCcHHHHhhhhhh
Q 004954 576 -NLCLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAVV---MILARIIGMLGPIDLEMLMQGQEI 650 (722)
Q Consensus 576 -~~~~~~gt~~y~APE~l~~~-~~s~ksDIWSLGviL~elltG~~PF~~~~~~---e~l~~i~~~lg~~~~~~~~~~~~~ 650 (722)
......++..|+|||++.+. .++.++||||+||++|+|++|+.||...... .....+.
T Consensus 150 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~----------------- 212 (278)
T cd05606 150 KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL----------------- 212 (278)
T ss_pred cCCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhh-----------------
Confidence 22345789999999999754 6889999999999999999999999764211 1110000
Q ss_pred hhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCc-----CHHHHHhCCCCCC
Q 004954 651 YKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRP-----TAREALDHPWLQH 720 (722)
Q Consensus 651 ~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRp-----Ta~ElL~HPwf~~ 720 (722)
.....+|. ..+..+.++|++||..+|.+|| ++.++++||||+.
T Consensus 213 ------------------~~~~~~~~---------~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~ 260 (278)
T cd05606 213 ------------------TMAVELPD---------SFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRS 260 (278)
T ss_pred ------------------ccCCCCCC---------cCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccC
Confidence 00011111 1246688999999999999999 9999999999975
No 241
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=4e-34 Score=292.54 Aligned_cols=249 Identities=33% Similarity=0.524 Sum_probs=203.2
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchh-hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEE
Q 004954 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD-FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFI 493 (722)
Q Consensus 415 rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~-~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~i 493 (722)
.|.+.+.||+|++|.||++.+..+++.+++|++..... ....+.+|+.+++.++ |++|+++++.+......++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~~l 74 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCK------HPNIVKYYGSYLKKDELWI 74 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCC------CCCEeEEEEEEecCCeEEE
Confidence 47889999999999999999988999999999976543 4567778888888775 6799999999999999999
Q ss_pred EEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCccc
Q 004954 494 VCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF 572 (722)
Q Consensus 494 VmEy~~-gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~ 572 (722)
++||+. ++|.+++.... ..+++..+..++.|++.||.+||+.|++|+||+|+||+++. ++.++|+|||.+..
T Consensus 75 ~~e~~~~~~L~~~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~--~~~~~l~d~~~~~~ 147 (253)
T cd05122 75 VMEFCSGGSLKDLLKSTN-----QTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTS--DGEVKLIDFGLSAQ 147 (253)
T ss_pred EEecCCCCcHHHHHhhcC-----CCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEcc--CCeEEEeecccccc
Confidence 999998 46666655332 23899999999999999999999999999999999999996 78899999999876
Q ss_pred ccCCc--cccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhh
Q 004954 573 QTDNL--CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEI 650 (722)
Q Consensus 573 ~~~~~--~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~~~ 650 (722)
..... ....++..|+|||.+.+..++.++|+||||+++|+|++|+.||...+.......+...
T Consensus 148 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--------------- 212 (253)
T cd05122 148 LSDTKARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATN--------------- 212 (253)
T ss_pred ccccccccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhc---------------
Confidence 65543 4457788999999999888899999999999999999999999776433333222110
Q ss_pred hhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCC
Q 004954 651 YKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPW 717 (722)
Q Consensus 651 ~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPw 717 (722)
.....+. ....+..+.++|.+||+.||++|||+.++|+|||
T Consensus 213 -------------------~~~~~~~-------~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~~~ 253 (253)
T cd05122 213 -------------------GPPGLRN-------PEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKHPF 253 (253)
T ss_pred -------------------CCCCcCc-------ccccCHHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence 0000000 0112456889999999999999999999999999
No 242
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=1.9e-34 Score=303.13 Aligned_cols=249 Identities=29% Similarity=0.400 Sum_probs=199.2
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEE
Q 004954 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF 492 (722)
Q Consensus 415 rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~--~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~ 492 (722)
-|++.+.||+|+||.||++.+..+++.+|+|++.... .....+.+|+.+++.++ ||||+++++.+......+
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~------h~~iv~~~~~~~~~~~~~ 78 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCD------SPYVTKYYGSYLKDTKLW 78 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcC------CCCEeEEEEEEEeCCeEE
Confidence 3778899999999999999999999999999976432 23345667777777664 789999999999999999
Q ss_pred EEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCcc
Q 004954 493 IVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 571 (722)
Q Consensus 493 iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~ 571 (722)
+||||+.+ +|..++.. ..+++..+..++.|++.||.+||+.|++|+||+|+||+++. ++.++|+|||++.
T Consensus 79 lv~e~~~~~~l~~~i~~-------~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~--~~~~~l~dfg~~~ 149 (277)
T cd06641 79 IIMEYLGGGSALDLLEP-------GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSE--HGEVKLADFGVAG 149 (277)
T ss_pred EEEEeCCCCcHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECC--CCCEEEeecccce
Confidence 99999986 55555432 12789999999999999999999999999999999999985 7789999999886
Q ss_pred cccCC---ccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhh
Q 004954 572 FQTDN---LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQ 648 (722)
Q Consensus 572 ~~~~~---~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~ 648 (722)
..... .....++..|+|||.+.+..++.++|+|||||++|+|++|..||...........+... .
T Consensus 150 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~--~---------- 217 (277)
T cd06641 150 QLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKN--N---------- 217 (277)
T ss_pred ecccchhhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcC--C----------
Confidence 54332 12245788899999998888899999999999999999999999765443333222100 0
Q ss_pred hhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCCCC
Q 004954 649 EIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQHP 721 (722)
Q Consensus 649 ~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~~~ 721 (722)
...+ ....+..+.++|.+||+.+|.+||++.++++||||.+.
T Consensus 218 ----------------------~~~~---------~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~~~~ 259 (277)
T cd06641 218 ----------------------PPTL---------EGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFIVRF 259 (277)
T ss_pred ----------------------CCCC---------CcccCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhhh
Confidence 0000 01234668899999999999999999999999999754
No 243
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=1.7e-34 Score=303.59 Aligned_cols=251 Identities=21% Similarity=0.244 Sum_probs=199.5
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCC-----cEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEE
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTG-----VDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY 486 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg-----~~vAvKil~~~~--~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~ 486 (722)
++|++.+.||+|+||.||+|.+...+ ..+|+|.++... .....+.+|+.+++.++ ||||+++++++.
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~------h~~i~~~~~~~~ 78 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQ------HPNIVCLLGVCT 78 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcC------CcccceEEEEEc
Confidence 57899999999999999999876555 689999986532 23455677888887764 789999999999
Q ss_pred ecCeEEEEEEccc-cchHHHHhhhhccC----------CCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEc
Q 004954 487 HLEHLFIVCELLR-ANLYEFQKFNQESG----------GEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIK 555 (722)
Q Consensus 487 ~~~~l~iVmEy~~-gsLl~~l~~~~~~~----------~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~ 555 (722)
.....+++|||+. ++|.+++....... ....+++..++.++.||+.||.|||+.|++|+||||+||+++
T Consensus 79 ~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~ 158 (283)
T cd05048 79 KEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVG 158 (283)
T ss_pred CCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEc
Confidence 9999999999997 47777776432211 113488899999999999999999999999999999999998
Q ss_pred ccCCCeEEEEecCCcccccCC-----ccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHH
Q 004954 556 SYQRCEIKIIDLGSSCFQTDN-----LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMIL 629 (722)
Q Consensus 556 ~~~~~~vkL~DFGls~~~~~~-----~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l 629 (722)
. ++.++|+|||++...... .....+++.|+|||.+.+..++.++|||||||++|+|++ |..||.+.+..++.
T Consensus 159 ~--~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~ 236 (283)
T cd05048 159 E--GLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVI 236 (283)
T ss_pred C--CCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHH
Confidence 5 778999999998654222 122345788999999998899999999999999999998 99999887666555
Q ss_pred HHHHhhcCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCH
Q 004954 630 ARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTA 709 (722)
Q Consensus 630 ~~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa 709 (722)
..+..... ... ....+..+.+|+.+||+.||.+||++
T Consensus 237 ~~i~~~~~----------------------------------~~~---------~~~~~~~~~~l~~~c~~~~p~~Rp~~ 273 (283)
T cd05048 237 EMIRSRQL----------------------------------LPC---------PEDCPARVYALMIECWNEIPARRPRF 273 (283)
T ss_pred HHHHcCCc----------------------------------CCC---------cccCCHHHHHHHHHHccCChhhCcCH
Confidence 44321100 000 11234678999999999999999999
Q ss_pred HHHHhC
Q 004954 710 REALDH 715 (722)
Q Consensus 710 ~ElL~H 715 (722)
.+++++
T Consensus 274 ~~i~~~ 279 (283)
T cd05048 274 KDIHTR 279 (283)
T ss_pred HHHHHH
Confidence 999975
No 244
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=3.4e-34 Score=297.70 Aligned_cols=247 Identities=23% Similarity=0.348 Sum_probs=199.0
Q ss_pred ecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 004954 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (722)
Q Consensus 412 l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (722)
-.++|++.++||+|+||.||+|.+ ..+..+|+|.+.......+.+.+|+.+++.++ |+||+++++.+...+..
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~-~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~~ 76 (261)
T cd05072 4 PRESIKLVKKLGAGQFGEVWMGYY-NNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQ------HDKLVRLYAVVTKEEPI 76 (261)
T ss_pred chHHeEEeeecCCcCCceEEEEEe-cCCceEEEEEccCCchhHHHHHHHHHHHHhCC------CCCeeeEEEEEcCCCCc
Confidence 346899999999999999999986 45678999998765555567788888888775 67999999999999999
Q ss_pred EEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCc
Q 004954 492 FIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (722)
Q Consensus 492 ~iVmEy~~-gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 570 (722)
++||||+. ++|.+++..... ..+++..++.++.|++.||+|||+.+++|+||||+||+++. ++.++|+|||++
T Consensus 77 ~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~--~~~~~l~dfg~~ 150 (261)
T cd05072 77 YIITEYMAKGSLLDFLKSDEG----GKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSE--SLMCKIADFGLA 150 (261)
T ss_pred EEEEecCCCCcHHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecC--CCcEEECCCccc
Confidence 99999997 577777654321 23788899999999999999999999999999999999986 788999999998
Q ss_pred ccccCCcc----ccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHHHHh
Q 004954 571 CFQTDNLC----LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLM 645 (722)
Q Consensus 571 ~~~~~~~~----~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~~i~~~lg~~~~~~~~ 645 (722)
........ ...++..|+|||.+.+..++.++|||||||++|+|++ |..||...........+.....
T Consensus 151 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~-------- 222 (261)
T cd05072 151 RVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYR-------- 222 (261)
T ss_pred eecCCCceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCC--------
Confidence 76543221 1234567999999998889999999999999999998 9999987665555444321100
Q ss_pred hhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHh
Q 004954 646 QGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 714 (722)
Q Consensus 646 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~ 714 (722)
.|. ....+..+.++|.+||..+|++|||++++++
T Consensus 223 ----------------------------~~~-------~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 256 (261)
T cd05072 223 ----------------------------MPR-------MENCPDELYDIMKTCWKEKAEERPTFDYLQS 256 (261)
T ss_pred ----------------------------CCC-------CCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 000 0112356889999999999999999999975
No 245
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=1.3e-34 Score=319.16 Aligned_cols=254 Identities=22% Similarity=0.343 Sum_probs=196.4
Q ss_pred cCcEEEEEEeccCCCCceEEEEE-----CCCCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEE
Q 004954 413 AGRYYVTEYLGSAAFSKVFQAQD-----LHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYF 485 (722)
Q Consensus 413 ~~rY~i~~~LG~G~fG~Vy~a~d-----~~tg~~vAvKil~~~~--~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f 485 (722)
.++|++.+.||+|+||+||+|++ ..++..||||+++... .....+.+|+.+++.+. .||||+++++++
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~-----~HpnIv~l~~~~ 108 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG-----NHINIVNLLGAC 108 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhc-----CCcceeeeeeee
Confidence 46899999999999999999974 3467789999987532 23456778999988884 378999999999
Q ss_pred EecCeEEEEEEccc-cchHHHHhhhhcc----------------------------------------------------
Q 004954 486 YHLEHLFIVCELLR-ANLYEFQKFNQES---------------------------------------------------- 512 (722)
Q Consensus 486 ~~~~~l~iVmEy~~-gsLl~~l~~~~~~---------------------------------------------------- 512 (722)
...+..++||||+. |+|.+++......
T Consensus 109 ~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 188 (375)
T cd05104 109 TVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRS 188 (375)
T ss_pred ccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccc
Confidence 99999999999997 5777776542210
Q ss_pred -----------------CCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCcccccC
Q 004954 513 -----------------GGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTD 575 (722)
Q Consensus 513 -----------------~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~~ 575 (722)
.....+++..+..++.||+.||+|||+.||+||||||+|||++. +..+||+|||++.....
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~--~~~~kl~DfG~a~~~~~ 266 (375)
T cd05104 189 VRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTH--GRITKICDFGLARDIRN 266 (375)
T ss_pred cccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEEC--CCcEEEecCccceeccC
Confidence 01124788889999999999999999999999999999999985 77899999999876543
Q ss_pred Ccc-----ccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhh
Q 004954 576 NLC-----LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQE 649 (722)
Q Consensus 576 ~~~-----~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~~ 649 (722)
... ...++..|+|||++.+..++.++|||||||++|+|++ |..||........+.+++.
T Consensus 267 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~--------------- 331 (375)
T cd05104 267 DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIK--------------- 331 (375)
T ss_pred cccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHH---------------
Confidence 221 1233567999999999999999999999999999998 8999976543322222110
Q ss_pred hhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhC
Q 004954 650 IYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 715 (722)
Q Consensus 650 ~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~H 715 (722)
. ......| ...+..+.+||.+||+.||++|||+.|+++.
T Consensus 332 ------~------------~~~~~~~---------~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 370 (375)
T cd05104 332 ------E------------GYRMLSP---------ECAPSEMYDIMKSCWDADPLKRPTFKQIVQL 370 (375)
T ss_pred ------h------------CccCCCC---------CCCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence 0 0000011 1224568999999999999999999999874
No 246
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=3.5e-34 Score=300.79 Aligned_cols=255 Identities=19% Similarity=0.268 Sum_probs=197.0
Q ss_pred ceecCcEEEEEEeccCCCCceEEEEEC-----CCCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEE
Q 004954 410 TVIAGRYYVTEYLGSAAFSKVFQAQDL-----HTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLY 482 (722)
Q Consensus 410 ~~l~~rY~i~~~LG~G~fG~Vy~a~d~-----~tg~~vAvKil~~~~--~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~ 482 (722)
++..++|++.+.||+|+||.||+|.+. .++..+|+|++.... .....+.+|+.+++.++ ||||++++
T Consensus 2 ~~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~------~~~iv~~~ 75 (277)
T cd05062 2 EVAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFN------CHHVVRLL 75 (277)
T ss_pred cccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCC------CCCeeeEE
Confidence 356788999999999999999999864 245789999886432 22344667777777664 78999999
Q ss_pred EEEEecCeEEEEEEcccc-chHHHHhhhhccC----CCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEccc
Q 004954 483 DYFYHLEHLFIVCELLRA-NLYEFQKFNQESG----GEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSY 557 (722)
Q Consensus 483 ~~f~~~~~l~iVmEy~~g-sLl~~l~~~~~~~----~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~ 557 (722)
+++......++||||+.+ +|.+++....... ....+++..+..++.|++.||.|||+.|++|+||||+||+++.
T Consensus 76 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~- 154 (277)
T cd05062 76 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE- 154 (277)
T ss_pred EEEcCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcC-
Confidence 999999999999999975 6766665322110 1223677889999999999999999999999999999999996
Q ss_pred CCCeEEEEecCCcccccCCc-----cccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHH
Q 004954 558 QRCEIKIIDLGSSCFQTDNL-----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILAR 631 (722)
Q Consensus 558 ~~~~vkL~DFGls~~~~~~~-----~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~~ 631 (722)
++.++|+|||++....... ....+++.|+|||++.+..++.++|||||||++|+|++ |..||.+....+.+..
T Consensus 155 -~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~ 233 (277)
T cd05062 155 -DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRF 233 (277)
T ss_pred -CCCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence 7889999999986543221 12244678999999999889999999999999999999 7999987766555443
Q ss_pred HHhhcCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHH
Q 004954 632 IIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTARE 711 (722)
Q Consensus 632 i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~E 711 (722)
+..... ..++ ...+..+.+||.+||+.||++|||+.|
T Consensus 234 ~~~~~~----------------------------------~~~~---------~~~~~~~~~li~~~l~~~p~~Rps~~e 270 (277)
T cd05062 234 VMEGGL----------------------------------LDKP---------DNCPDMLFELMRMCWQYNPKMRPSFLE 270 (277)
T ss_pred HHcCCc----------------------------------CCCC---------CCCCHHHHHHHHHHcCCChhhCcCHHH
Confidence 321100 0001 112356899999999999999999999
Q ss_pred HHhC
Q 004954 712 ALDH 715 (722)
Q Consensus 712 lL~H 715 (722)
++++
T Consensus 271 ~l~~ 274 (277)
T cd05062 271 IISS 274 (277)
T ss_pred HHHH
Confidence 9975
No 247
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=1.1e-34 Score=313.23 Aligned_cols=289 Identities=19% Similarity=0.239 Sum_probs=194.4
Q ss_pred EEeccC--CCCceEEEEECCCCcEEEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEE
Q 004954 420 EYLGSA--AFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIV 494 (722)
Q Consensus 420 ~~LG~G--~fG~Vy~a~d~~tg~~vAvKil~~~~---~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~iV 494 (722)
..||+| +||+||++++..+|+.||+|++.... ...+.+.+|+.+++.+ .||||++++++|...+..++|
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l------~h~niv~~~~~~~~~~~~~~v 77 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFF------RHPNIMTSWTVFTTGSWLWVI 77 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhC------CCCCcceEeeeEecCCceEEE
Confidence 346666 99999999999999999999987533 2234556666666655 478999999999999999999
Q ss_pred EEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCcccc
Q 004954 495 CELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQ 573 (722)
Q Consensus 495 mEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~ 573 (722)
|||+.+ ++.+++..... ..+++..+..++.||+.||+|||+.||+||||||+|||++. ++.++++||+.+...
T Consensus 78 ~e~~~~~~l~~~l~~~~~----~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~--~~~~~~~~~~~~~~~ 151 (328)
T cd08226 78 SPFMAYGSANSLLKTYFP----EGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISG--DGLVSLSGLSHLYSL 151 (328)
T ss_pred EecccCCCHHHHHHhhcc----cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeC--CCcEEEechHHHhhh
Confidence 999985 66666654322 12889999999999999999999999999999999999985 788999999854321
Q ss_pred cCC----------ccccccCCcccCchhhcCC--CCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcH
Q 004954 574 TDN----------LCLYVQSRSYRAPEVIIGL--PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDL 641 (722)
Q Consensus 574 ~~~----------~~~~~gt~~y~APE~l~~~--~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~ 641 (722)
... .....++..|+|||++.+. .++.++|||||||++|+|++|..||........+..+.......+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 231 (328)
T cd08226 152 VRNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPL 231 (328)
T ss_pred hccCccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCc
Confidence 110 1112345679999999764 4789999999999999999999999887655555444432221111
Q ss_pred HHHhhhhhhhhhhcccccchh--h-hhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCC
Q 004954 642 EMLMQGQEIYKYFTKEYDLYY--I-NEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 718 (722)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf 718 (722)
..................... . ................-.......+..+.+||++||+.||++|||+.|+|+||||
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~ 311 (328)
T cd08226 232 DITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFF 311 (328)
T ss_pred cccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHH
Confidence 110000000000000000000 0 0000000000000000000011234678999999999999999999999999999
Q ss_pred CC
Q 004954 719 QH 720 (722)
Q Consensus 719 ~~ 720 (722)
..
T Consensus 312 ~~ 313 (328)
T cd08226 312 KQ 313 (328)
T ss_pred HH
Confidence 64
No 248
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=5.4e-34 Score=292.77 Aligned_cols=248 Identities=32% Similarity=0.431 Sum_probs=202.6
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec--C
Q 004954 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL--E 489 (722)
Q Consensus 415 rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~---~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~--~ 489 (722)
+|++.+.||+|++|.||+|.+..+++.+++|++.... ...+.+.+|+.+++.++ |+||+++++.+... .
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~ 74 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQ------HPNIVRYYGSERDEEKN 74 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcC------CCCEeeEEEEEecCCCC
Confidence 5889999999999999999999899999999987654 34567778888888875 68999999999988 8
Q ss_pred eEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecC
Q 004954 490 HLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (722)
Q Consensus 490 ~l~iVmEy~~-gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFG 568 (722)
..++||||+. ++|.+++.... .+++..++.++.|++.||+|||+.|++|+||+|+||+++. ++.++|+|||
T Consensus 75 ~~~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~--~~~~~l~d~~ 146 (260)
T cd06606 75 TLNIFLEYVSGGSLSSLLKKFG------KLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDS--DGVVKLADFG 146 (260)
T ss_pred eEEEEEEecCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcC--CCCEEEcccc
Confidence 9999999996 56766665332 3899999999999999999999999999999999999996 7889999999
Q ss_pred CcccccCCc-----cccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCh-HHHHHHHHHhhcCCCcHH
Q 004954 569 SSCFQTDNL-----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDA-VVMILARIIGMLGPIDLE 642 (722)
Q Consensus 569 ls~~~~~~~-----~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~-~~e~l~~i~~~lg~~~~~ 642 (722)
.+....... ....++..|+|||.+.+...+.++||||||+++|+|++|..||.... .......+..
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-------- 218 (260)
T cd06606 147 CAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGS-------- 218 (260)
T ss_pred cEEecccccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccc--------
Confidence 987655442 33567889999999998889999999999999999999999997754 1111111100
Q ss_pred HHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCC
Q 004954 643 MLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 718 (722)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf 718 (722)
......+|. ..+..+.+||.+||+.||.+||++.++|+||||
T Consensus 219 -------------------------~~~~~~~~~---------~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 260 (260)
T cd06606 219 -------------------------SGEPPEIPE---------HLSEEAKDFLRKCLRRDPKKRPTADELLQHPFL 260 (260)
T ss_pred -------------------------cCCCcCCCc---------ccCHHHHHHHHHhCcCChhhCCCHHHHhhCCCC
Confidence 000011111 124678999999999999999999999999997
No 249
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=2e-34 Score=302.81 Aligned_cols=247 Identities=27% Similarity=0.346 Sum_probs=193.3
Q ss_pred eccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEEEc
Q 004954 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCEL 497 (722)
Q Consensus 422 LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~----~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~iVmEy 497 (722)
||+|+||+||++.+..+|+.+|+|++.... .....+.+|+++++.++ ||||+++++.+...+..++||||
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~~lv~e~ 74 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVS------SRFIVSLAYAFETKDDLCLVMTL 74 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCC------CCCEeeeeeEEecCCeEEEEEec
Confidence 699999999999999999999999986532 22334567888887775 68999999999999999999999
Q ss_pred ccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCcccccCC
Q 004954 498 LRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDN 576 (722)
Q Consensus 498 ~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~~~ 576 (722)
+++ +|.+.+..... ..+++..++.++.|++.||.|||+.|++|+||+|+||+++. ++.++|+|||.+......
T Consensus 75 ~~~~~L~~~l~~~~~----~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~--~~~~~l~dfg~~~~~~~~ 148 (277)
T cd05577 75 MNGGDLKYHIYNVGE----PGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDD--HGNVRISDLGLAVELKGG 148 (277)
T ss_pred CCCCcHHHHHHHcCc----CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECC--CCCEEEccCcchhhhccC
Confidence 985 66666553322 23899999999999999999999999999999999999986 778999999988654322
Q ss_pred --ccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhh
Q 004954 577 --LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYF 654 (722)
Q Consensus 577 --~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~~~~~~~ 654 (722)
.....++..|+|||++.+..++.++|||||||++|+|++|+.||...........+....
T Consensus 149 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~------------------ 210 (277)
T cd05577 149 KKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRT------------------ 210 (277)
T ss_pred CccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhcc------------------
Confidence 223456788999999998889999999999999999999999997643211111111000
Q ss_pred cccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCc-----CHHHHHhCCCCCC
Q 004954 655 TKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRP-----TAREALDHPWLQH 720 (722)
Q Consensus 655 ~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRp-----Ta~ElL~HPwf~~ 720 (722)
.......+ ...++.+.+||++||+.||.+|| ++.++++||||..
T Consensus 211 -------------~~~~~~~~---------~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~ 259 (277)
T cd05577 211 -------------LEMAVEYP---------DKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKD 259 (277)
T ss_pred -------------ccccccCC---------ccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhChhhhc
Confidence 00000011 11246789999999999999999 9999999999953
No 250
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=4.7e-34 Score=306.46 Aligned_cols=251 Identities=25% Similarity=0.366 Sum_probs=201.0
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~----~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (722)
+.|...+.||+|+||+||+|++..+++.+++|++.... .....+.+|+.+++.++ |+|++++++++....
T Consensus 21 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~~~~ 94 (313)
T cd06633 21 EIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLK------HPNTIEYKGCYLKEH 94 (313)
T ss_pred HHhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCC------CCCCccEEEEEEeCC
Confidence 34777888999999999999999999999999986432 22345667777777764 689999999999999
Q ss_pred eEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCC
Q 004954 490 HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS 569 (722)
Q Consensus 490 ~l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGl 569 (722)
..++||||+.+++.+++..... .+++..+..++.||+.||.|||+.|++|+||+|+||+++. ++.++|+|||+
T Consensus 95 ~~~lv~e~~~~~l~~~l~~~~~-----~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~--~~~~kL~dfg~ 167 (313)
T cd06633 95 TAWLVMEYCLGSASDLLEVHKK-----PLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTE--PGQVKLADFGS 167 (313)
T ss_pred EEEEEEecCCCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECC--CCCEEEeecCC
Confidence 9999999999988887764321 2888999999999999999999999999999999999985 77899999998
Q ss_pred cccccCCccccccCCcccCchhhc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhh
Q 004954 570 SCFQTDNLCLYVQSRSYRAPEVII---GLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQ 646 (722)
Q Consensus 570 s~~~~~~~~~~~gt~~y~APE~l~---~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~ 646 (722)
+..... .....++..|+|||++. ...++.++|||||||++|+|++|..||...+....+..+....
T Consensus 168 ~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~---------- 236 (313)
T cd06633 168 ASKSSP-ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQND---------- 236 (313)
T ss_pred CcccCC-CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcC----------
Confidence 865432 23456888999999984 3567889999999999999999999997765544443332100
Q ss_pred hhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCCC
Q 004954 647 GQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 720 (722)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~~ 720 (722)
.|... ....+..+.+||.+||+.+|.+||++.++|.||||+.
T Consensus 237 ---------------------------~~~~~-----~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~~ 278 (313)
T cd06633 237 ---------------------------SPTLQ-----SNEWTDSFRGFVDYCLQKIPQERPASAELLRHDFVRR 278 (313)
T ss_pred ---------------------------CCCCC-----ccccCHHHHHHHHHHccCChhhCcCHHHHhcCcccCC
Confidence 00000 0012345889999999999999999999999999975
No 251
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=3.6e-34 Score=302.87 Aligned_cols=250 Identities=26% Similarity=0.423 Sum_probs=200.3
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch-hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEE
Q 004954 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFI 493 (722)
Q Consensus 415 rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~-~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~i 493 (722)
+|...++||+|++|.||++.+..+++.+++|.+.... .....+.+|+.+++.+. |+||+++++++...++.++
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~------h~~vv~~~~~~~~~~~~~~ 93 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQ------HPNIVEMYSSYLVGDELWV 93 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcC------CCChheEEEEEEcCCeEEE
Confidence 4566679999999999999999999999999886433 22345667777777764 7899999999999999999
Q ss_pred EEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCccc
Q 004954 494 VCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF 572 (722)
Q Consensus 494 VmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~ 572 (722)
|+||+.+ +|.+.+.. . .++...+..++.||+.||+|||+.||+||||+|+||+++. ++.++|+|||.+..
T Consensus 94 v~e~~~~~~L~~~~~~-~------~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~--~~~~~l~d~g~~~~ 164 (285)
T cd06648 94 VMEFLEGGALTDIVTH-T------RMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTS--DGRVKLSDFGFCAQ 164 (285)
T ss_pred EEeccCCCCHHHHHHh-C------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcC--CCcEEEcccccchh
Confidence 9999975 56555543 1 2788999999999999999999999999999999999986 78899999998764
Q ss_pred ccCC---ccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhh
Q 004954 573 QTDN---LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQE 649 (722)
Q Consensus 573 ~~~~---~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~~ 649 (722)
.... .....+++.|+|||.+.+..++.++|+|||||++|+|++|+.||...+....+..+.....
T Consensus 165 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~------------ 232 (285)
T cd06648 165 VSKEVPRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLP------------ 232 (285)
T ss_pred hccCCcccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcCC------------
Confidence 3322 1224678899999999988899999999999999999999999977665544444321100
Q ss_pred hhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCCC
Q 004954 650 IYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 720 (722)
Q Consensus 650 ~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~~ 720 (722)
..+. .....+..+.+||++||+.+|++|||+.++|+||||++
T Consensus 233 ----------------------~~~~-------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~ 274 (285)
T cd06648 233 ----------------------PKLK-------NLHKVSPRLRSFLDRMLVRDPAQRATAAELLNHPFLAK 274 (285)
T ss_pred ----------------------CCCc-------ccccCCHHHHHHHHHHcccChhhCcCHHHHccCccccc
Confidence 0000 01113456899999999999999999999999999975
No 252
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=1.7e-34 Score=302.75 Aligned_cols=251 Identities=22% Similarity=0.253 Sum_probs=199.0
Q ss_pred cCcEEEEEEeccCCCCceEEEEEC-----CCCcEEEEEEeecchh--hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEE
Q 004954 413 AGRYYVTEYLGSAAFSKVFQAQDL-----HTGVDVCLKIIKNDKD--FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYF 485 (722)
Q Consensus 413 ~~rY~i~~~LG~G~fG~Vy~a~d~-----~tg~~vAvKil~~~~~--~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f 485 (722)
.++|.+.+.||+|+||.||+|.+. .+++.+|+|+++.... ....+.+|+++++.+. |+||+++++++
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~ 77 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQ------HENIVKFYGVC 77 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcC------CCCchheeeEE
Confidence 356899999999999999999874 3468899999876432 3467788888888775 67999999999
Q ss_pred EecCeEEEEEEcccc-chHHHHhhhhc--------cCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcc
Q 004954 486 YHLEHLFIVCELLRA-NLYEFQKFNQE--------SGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKS 556 (722)
Q Consensus 486 ~~~~~l~iVmEy~~g-sLl~~l~~~~~--------~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~ 556 (722)
......++||||+.+ +|.+++..... ......+++..+..++.||+.||+|||++|++||||||+||+++.
T Consensus 78 ~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~ 157 (280)
T cd05049 78 TEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGY 157 (280)
T ss_pred ecCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcC
Confidence 999999999999974 67777654321 122334888999999999999999999999999999999999986
Q ss_pred cCCCeEEEEecCCcccccCC-----ccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHH
Q 004954 557 YQRCEIKIIDLGSSCFQTDN-----LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILA 630 (722)
Q Consensus 557 ~~~~~vkL~DFGls~~~~~~-----~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~ 630 (722)
++.++|+|||++...... .....+++.|+|||++.+..++.++|||||||++|+|++ |..||...+..+...
T Consensus 158 --~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~ 235 (280)
T cd05049 158 --DLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIE 235 (280)
T ss_pred --CCeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Confidence 789999999998653221 122345678999999999999999999999999999998 999997766555444
Q ss_pred HHHhhcCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHH
Q 004954 631 RIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAR 710 (722)
Q Consensus 631 ~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ 710 (722)
.+..... ...+ ...+..+.+||++||+.||.+|||+.
T Consensus 236 ~~~~~~~----------------------------------~~~~---------~~~~~~~~~li~~~l~~~p~~Rp~~~ 272 (280)
T cd05049 236 CITQGRL----------------------------------LQRP---------RTCPSEVYDIMLGCWKRDPQQRINIK 272 (280)
T ss_pred HHHcCCc----------------------------------CCCC---------CCCCHHHHHHHHHHcCCCcccCCCHH
Confidence 4321100 0001 12345688999999999999999999
Q ss_pred HHHh
Q 004954 711 EALD 714 (722)
Q Consensus 711 ElL~ 714 (722)
|+++
T Consensus 273 eil~ 276 (280)
T cd05049 273 DIHE 276 (280)
T ss_pred HHHH
Confidence 9986
No 253
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=2.3e-34 Score=305.53 Aligned_cols=255 Identities=28% Similarity=0.391 Sum_probs=198.6
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCe
Q 004954 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 490 (722)
Q Consensus 413 ~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~--~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~ 490 (722)
.+.|++.+.||+|+||.||+|.+..+++.+|||+++... ........|+.++..+. +|+||+++++++.....
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~-----~~~~i~~~~~~~~~~~~ 88 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSH-----DCPYIVKCYGYFITDSD 88 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhcc-----CCCchHhhheeeecCCe
Confidence 467999999999999999999999889999999987542 22234455555554432 58899999999999999
Q ss_pred EEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHH-CCCccccCCCCceEEcccCCCeEEEEecCC
Q 004954 491 LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS-LGIIHCDLKPENILIKSYQRCEIKIIDLGS 569 (722)
Q Consensus 491 l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs-~gIvHrDLKp~NILl~~~~~~~vkL~DFGl 569 (722)
.++||||+.+.+..++..... .+++..+..++.|++.||+|||+ .||+||||+|+||+++. ++.++|+|||+
T Consensus 89 ~~~v~e~~~~~l~~l~~~~~~-----~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~--~~~~kL~dfg~ 161 (296)
T cd06618 89 VFICMELMSTCLDKLLKRIQG-----PIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDA--SGNVKLCDFGI 161 (296)
T ss_pred EEEEeeccCcCHHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcC--CCCEEECcccc
Confidence 999999998877776654322 38899999999999999999997 59999999999999985 78899999999
Q ss_pred cccccCC--ccccccCCcccCchhhcCCC----CCchhhHHHHHHHHHHHHhCCCCCCCChH-HHHHHHHHhhcCCCcHH
Q 004954 570 SCFQTDN--LCLYVQSRSYRAPEVIIGLP----YDQKIDLWSLGCILAELWTGEVLFPNDAV-VMILARIIGMLGPIDLE 642 (722)
Q Consensus 570 s~~~~~~--~~~~~gt~~y~APE~l~~~~----~s~ksDIWSLGviL~elltG~~PF~~~~~-~e~l~~i~~~lg~~~~~ 642 (722)
+...... .....+++.|+|||.+.+.. ++.++||||||+++|+|++|+.||..... .+.+..+....
T Consensus 162 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~------ 235 (296)
T cd06618 162 SGRLVDSKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEE------ 235 (296)
T ss_pred chhccCCCcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCC------
Confidence 8654332 22234678899999987654 78899999999999999999999976322 22222221100
Q ss_pred HHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCCC
Q 004954 643 MLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 720 (722)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~~ 720 (722)
....+.. ...+..+.+||.+||..||.+||++.++++||||+.
T Consensus 236 ----------------------------~~~~~~~-------~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 278 (296)
T cd06618 236 ----------------------------PPSLPPN-------EGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRR 278 (296)
T ss_pred ----------------------------CCCCCCC-------CCCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhc
Confidence 0000100 123466899999999999999999999999999975
No 254
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=4.3e-34 Score=300.32 Aligned_cols=254 Identities=20% Similarity=0.277 Sum_probs=198.9
Q ss_pred cCcEEEEEEeccCCCCceEEEEECC-----CCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEE
Q 004954 413 AGRYYVTEYLGSAAFSKVFQAQDLH-----TGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYF 485 (722)
Q Consensus 413 ~~rY~i~~~LG~G~fG~Vy~a~d~~-----tg~~vAvKil~~~~--~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f 485 (722)
.++|++.+.||+|++|.||+|.+.. ++..||+|.+.... .....+.+|+.+++.++ |+||+++++++
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~ 78 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFN------HQNIVRLIGVS 78 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCC------CCCEeeEEEEE
Confidence 4679999999999999999999877 78899999886432 22345677777777764 68999999999
Q ss_pred EecCeEEEEEEccc-cchHHHHhhhhcc-CCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccC-CCeE
Q 004954 486 YHLEHLFIVCELLR-ANLYEFQKFNQES-GGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQ-RCEI 562 (722)
Q Consensus 486 ~~~~~l~iVmEy~~-gsLl~~l~~~~~~-~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~-~~~v 562 (722)
......++||||+. ++|.+++...... .....+++..+..++.||+.||+|||+.+++|+||||+||+++..+ ...+
T Consensus 79 ~~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~ 158 (277)
T cd05036 79 FERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVA 158 (277)
T ss_pred ccCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcce
Confidence 99999999999996 5777777654321 1123489999999999999999999999999999999999998533 3469
Q ss_pred EEEecCCcccccCCcc-----ccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhc
Q 004954 563 KIIDLGSSCFQTDNLC-----LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGML 636 (722)
Q Consensus 563 kL~DFGls~~~~~~~~-----~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~~i~~~l 636 (722)
||+|||++........ ....+..|+|||++.+..++.++|||||||++|+|++ |..||.+.+..+....+....
T Consensus 159 kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~ 238 (277)
T cd05036 159 KIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTGGG 238 (277)
T ss_pred EeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC
Confidence 9999999876532211 1223567999999999899999999999999999997 999998876655443332100
Q ss_pred CCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhC
Q 004954 637 GPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 715 (722)
Q Consensus 637 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~H 715 (722)
....| ...+..+.++|.+||+.+|++|||+.++|+|
T Consensus 239 ----------------------------------~~~~~---------~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~ 274 (277)
T cd05036 239 ----------------------------------RLDPP---------KGCPGPVYRIMTDCWQHTPEDRPNFATILER 274 (277)
T ss_pred ----------------------------------cCCCC---------CCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 00001 1124568899999999999999999999987
No 255
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=2.1e-35 Score=310.11 Aligned_cols=248 Identities=30% Similarity=0.416 Sum_probs=197.1
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~--~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (722)
+.|++.+.||+|+||.||+|.+..+++.||+|++.... .....+.+|+.+++.+ .|+||+++++.+......
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l------~h~~i~~~~~~~~~~~~~ 77 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQC------DSPYITRYYGSYLKGTKL 77 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcC------CCCccHhhhcccccCCce
Confidence 34667788999999999999999999999999987432 3334566777777766 478999999999999999
Q ss_pred EEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCc
Q 004954 492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (722)
Q Consensus 492 ~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 570 (722)
++||||+.+ +|.+.+.. ..+++..++.++.||+.||.|||++|++|+||+|+||+++. ++.++|+|||++
T Consensus 78 ~lv~e~~~~~~L~~~~~~-------~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~--~~~~~l~dfg~~ 148 (277)
T cd06642 78 WIIMEYLGGGSALDLLKP-------GPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSE--QGDVKLADFGVA 148 (277)
T ss_pred EEEEEccCCCcHHHHhhc-------CCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeC--CCCEEEcccccc
Confidence 999999986 55555432 12788999999999999999999999999999999999985 788999999998
Q ss_pred ccccCCc---cccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 004954 571 CFQTDNL---CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 647 (722)
Q Consensus 571 ~~~~~~~---~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~ 647 (722)
....... ....++..|+|||.+.+..++.++|+|||||++|+|++|+.||...........+...
T Consensus 149 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~------------ 216 (277)
T cd06642 149 GQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKN------------ 216 (277)
T ss_pred ccccCcchhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhcC------------
Confidence 6644322 2245788899999999988999999999999999999999999754433222111000
Q ss_pred hhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCC
Q 004954 648 QEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQ 719 (722)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~ 719 (722)
....++ ...+..+.+||.+||+.+|.+|||+.++|+||||+
T Consensus 217 ----------------------~~~~~~---------~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~ 257 (277)
T cd06642 217 ----------------------SPPTLE---------GQYSKPFKEFVEACLNKDPRFRPTAKELLKHKFIT 257 (277)
T ss_pred ----------------------CCCCCC---------cccCHHHHHHHHHHccCCcccCcCHHHHHHhHHHH
Confidence 000000 11235688999999999999999999999999986
No 256
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.6e-37 Score=303.66 Aligned_cols=282 Identities=25% Similarity=0.462 Sum_probs=224.6
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeec--c-hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec-
Q 004954 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKN--D-KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL- 488 (722)
Q Consensus 413 ~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~--~-~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~- 488 (722)
.+.|.-+.+||+|.||.||+|+.+.+|+.||+|++.. . ..+....++|+++|+.|+ |+|++.++..+...
T Consensus 16 ~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lk------Henv~nliEic~tk~ 89 (376)
T KOG0669|consen 16 VSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLK------HENVVNLIEICRTKA 89 (376)
T ss_pred chHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhc------chhHHHHHHHHhhcc
Confidence 4667788899999999999999999999999987543 2 233456788999999887 55777777666532
Q ss_pred -------CeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCe
Q 004954 489 -------EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCE 561 (722)
Q Consensus 489 -------~~l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~ 561 (722)
..+|+||++|+.+|..++.... ..+++.++..++.++++||.|+|...|+|||+|++|+||+. ++.
T Consensus 90 Tp~~r~r~t~ylVf~~cehDLaGlLsn~~-----vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~--dgi 162 (376)
T KOG0669|consen 90 TPTNRDRATFYLVFDFCEHDLAGLLSNRK-----VRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITK--DGI 162 (376)
T ss_pred CCcccccceeeeeHHHhhhhHHHHhcCcc-----ccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcC--Cce
Confidence 3589999999998887775432 23999999999999999999999999999999999999995 899
Q ss_pred EEEEecCCcccccCC-------ccccccCCcccCchhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHH
Q 004954 562 IKIIDLGSSCFQTDN-------LCLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARII 633 (722)
Q Consensus 562 vkL~DFGls~~~~~~-------~~~~~gt~~y~APE~l~~~-~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~ 633 (722)
+||+|||+++..... .+..+-|.+|++||.+.|. .|+.+.|||..|||+.||+|+.+.|++++....+..|.
T Consensus 163 lklADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is 242 (376)
T KOG0669|consen 163 LKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLIS 242 (376)
T ss_pred EEeeccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHH
Confidence 999999998643322 2234568999999999875 58999999999999999999999999999999999999
Q ss_pred hhcCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCc--cchhh--hhcccCcHHHHHHHHHhcccCCCCCcCH
Q 004954 634 GMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPE--ESSLE--HHLQFSDAFFIDFVRTLLEINPQRRPTA 709 (722)
Q Consensus 634 ~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~--~~~l~--~~~~~~~~~l~dLL~~mL~~dP~kRpTa 709 (722)
.+.|.+..+.|+....+.-|..-+... +|. ...+. ..+...+.+..+||.+||..||.+|+++
T Consensus 243 ~LcGs~tkevWP~~d~lpL~~sie~eP-------------l~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~a 309 (376)
T KOG0669|consen 243 QLCGSITKEVWPNVDNLPLYQSIELEP-------------LPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDA 309 (376)
T ss_pred HHhccCCcccCCCcccchHHHhccCCC-------------CCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcch
Confidence 999999999888765443332211000 111 01111 1133456778899999999999999999
Q ss_pred HHHHhCCCCCC
Q 004954 710 REALDHPWLQH 720 (722)
Q Consensus 710 ~ElL~HPwf~~ 720 (722)
+++|.|.||.+
T Consensus 310 d~alnh~~F~k 320 (376)
T KOG0669|consen 310 DQALNHDFFWK 320 (376)
T ss_pred Hhhhchhhhhc
Confidence 99999999953
No 257
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=1.5e-34 Score=307.09 Aligned_cols=253 Identities=28% Similarity=0.457 Sum_probs=201.0
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc-hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 004954 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND-KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (722)
Q Consensus 413 ~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~-~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (722)
.++|.+.+.||+|+||.||++.+..+++.+|+|.+... ....+.+.+|+.+++.++ ||||+++++.+...+..
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~------hp~i~~~~~~~~~~~~~ 91 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENK------HPNIVNYLDSYLVGDEL 91 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcC------CCCeeehhheeeeCCcE
Confidence 47899999999999999999999889999999998643 223345667777776654 78999999999999999
Q ss_pred EEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCc
Q 004954 492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (722)
Q Consensus 492 ~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 570 (722)
++|+||+.+ +|.+++... .+++..+..++.|++.||.|||++|++|+||+|+||+++. ++.++|+|||++
T Consensus 92 ~lv~e~~~~~~L~~~~~~~-------~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~--~~~~kL~dfg~~ 162 (293)
T cd06647 92 WVVMEYLAGGSLTDVVTET-------CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM--DGSVKLTDFGFC 162 (293)
T ss_pred EEEEecCCCCcHHHHHhhc-------CCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcC--CCCEEEccCcce
Confidence 999999975 666655421 2788899999999999999999999999999999999985 778999999987
Q ss_pred ccccCC---ccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 004954 571 CFQTDN---LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 647 (722)
Q Consensus 571 ~~~~~~---~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~ 647 (722)
...... .....+++.|+|||.+.+..++.++|+|||||++|++++|+.||...+....+..+.. +.
T Consensus 163 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~--~~--------- 231 (293)
T cd06647 163 AQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT--NG--------- 231 (293)
T ss_pred ecccccccccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhc--CC---------
Confidence 654332 2234678889999999888899999999999999999999999977544322211110 00
Q ss_pred hhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCCCC
Q 004954 648 QEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQHP 721 (722)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~~~ 721 (722)
....+ .....+..+.+||++||+.+|++||++.+++.||||+..
T Consensus 232 -----------------------~~~~~-------~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~~~ 275 (293)
T cd06647 232 -----------------------TPELQ-------NPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLKIA 275 (293)
T ss_pred -----------------------CCCCC-------CccccCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcC
Confidence 00000 011123568899999999999999999999999999864
No 258
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=6.8e-34 Score=296.10 Aligned_cols=250 Identities=26% Similarity=0.355 Sum_probs=197.2
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc----hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~----~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (722)
++|++.+.||+|+||.||+|++..+++.||||.++.. ......+.+|+.+++.++ ||||+++++++...+
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~ 75 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLN------HPNVIKYLDSFIEDN 75 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCC------CcceeeeeeeEEECC
Confidence 5799999999999999999999999999999987542 233345677888888775 789999999999999
Q ss_pred eEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecC
Q 004954 490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (722)
Q Consensus 490 ~l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFG 568 (722)
..++||||+.+ +|.+++..... ....+++..+..++.||+.||.|||++|++|+||||+||+++. ++.++|+|||
T Consensus 76 ~~~~v~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~--~~~~~l~d~g 151 (267)
T cd08228 76 ELNIVLELADAGDLSQMIKYFKK--QKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITA--TGVVKLGDLG 151 (267)
T ss_pred eEEEEEEecCCCcHHHHHHHhhh--ccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcC--CCCEEECccc
Confidence 99999999985 66666653322 1233788999999999999999999999999999999999986 7789999999
Q ss_pred CcccccCCc---cccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChH--HHHHHHHHhhcCCCcHHH
Q 004954 569 SSCFQTDNL---CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAV--VMILARIIGMLGPIDLEM 643 (722)
Q Consensus 569 ls~~~~~~~---~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~--~e~l~~i~~~lg~~~~~~ 643 (722)
++....... ....+++.|+|||.+.+..++.++|+||||+++|+|++|+.||..... ......+. ..+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~-~~~~----- 225 (267)
T cd08228 152 LGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIE-QCDY----- 225 (267)
T ss_pred cceeccchhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHh-cCCC-----
Confidence 887654322 234678899999999988899999999999999999999999965422 22222211 0000
Q ss_pred HhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhC
Q 004954 644 LMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 715 (722)
Q Consensus 644 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~H 715 (722)
|... ....+..+.++|.+||+.+|++||++.++|+.
T Consensus 226 -------------------------------~~~~-----~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~ 261 (267)
T cd08228 226 -------------------------------PPLP-----TEHYSEKLRELVSMCIYPDPDQRPDIGYVHQI 261 (267)
T ss_pred -------------------------------CCCC-----hhhcCHHHHHHHHHHCCCCcccCcCHHHHHHH
Confidence 0000 00123568899999999999999999999964
No 259
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=3.1e-34 Score=302.56 Aligned_cols=256 Identities=29% Similarity=0.441 Sum_probs=208.5
Q ss_pred ecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 004954 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (722)
Q Consensus 412 l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (722)
..+.|++.+.||+|++|.||++.+..+++.+++|++.........+.+|+.+++.++ |+||+++++.+......
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~ 90 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCK------HPNIVDYYDSYLVGDEL 90 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHCC------CCCeeEEEEEEEECCEE
Confidence 456799999999999999999999889999999999865544566778888887775 67999999999999999
Q ss_pred EEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCc
Q 004954 492 FIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (722)
Q Consensus 492 ~iVmEy~~-gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 570 (722)
++|+||+. ++|.+++.... ..+++..+..++.|++.||.|||+.||+|+||+|+||+++. ++.++|+|||++
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~-----~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~--~~~~~l~d~~~~ 163 (286)
T cd06614 91 WVVMEYMDGGSLTDIITQNF-----VRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSK--DGSVKLADFGFA 163 (286)
T ss_pred EEEEeccCCCcHHHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcC--CCCEEECccchh
Confidence 99999998 57877776543 23899999999999999999999999999999999999996 778999999987
Q ss_pred ccccCC---ccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 004954 571 CFQTDN---LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 647 (722)
Q Consensus 571 ~~~~~~---~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~ 647 (722)
...... .....+++.|+|||.+.+..++.++|+||||+++|+|++|..||...+.......+... +..
T Consensus 164 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~-~~~-------- 234 (286)
T cd06614 164 AQLTKEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTK-GIP-------- 234 (286)
T ss_pred hhhccchhhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc-CCC--------
Confidence 654332 12345678899999999888999999999999999999999999876555443332210 000
Q ss_pred hhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCCCC
Q 004954 648 QEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQHP 721 (722)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~~~ 721 (722)
..+. ....+..+.+||++||+.+|.+|||+.++|+||||++.
T Consensus 235 -------------------------~~~~-------~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~ 276 (286)
T cd06614 235 -------------------------PLKN-------PEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKKA 276 (286)
T ss_pred -------------------------CCcc-------hhhCCHHHHHHHHHHhccChhhCcCHHHHhhChHhhcc
Confidence 0000 01124568899999999999999999999999999863
No 260
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=6.1e-34 Score=297.22 Aligned_cols=248 Identities=27% Similarity=0.386 Sum_probs=191.0
Q ss_pred EEEeccCCCCceEEEEECCCCcEEEEEEeecch-hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEEEc
Q 004954 419 TEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCEL 497 (722)
Q Consensus 419 ~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~-~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~iVmEy 497 (722)
...||+|+||.||+|++..+++.+|+|.+.... .....+.+|+.+++.++ |+||+++++++...+..++||||
T Consensus 13 ~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~------h~~iv~~~~~~~~~~~~~lv~e~ 86 (268)
T cd06624 13 RVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLK------HRNIVQYLGSDSENGFFKIFMEQ 86 (268)
T ss_pred eEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcC------CCCeeeeeeeeccCCEEEEEEec
Confidence 357999999999999999999999999886543 33456778888888775 68999999999999999999999
Q ss_pred ccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCcccccCC
Q 004954 498 LRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDN 576 (722)
Q Consensus 498 ~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~~~ 576 (722)
+.+ +|.+.+...... ...+...+..++.||+.||+|||+.||+||||||+||+++. ..+.++|+|||.+......
T Consensus 87 ~~~~~L~~~l~~~~~~---~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~-~~~~~~l~dfg~~~~~~~~ 162 (268)
T cd06624 87 VPGGSLSALLRSKWGP---LKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNT-YSGVVKISDFGTSKRLAGI 162 (268)
T ss_pred CCCCCHHHHHHHhccc---CCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcC-CCCeEEEecchhheecccC
Confidence 975 666666533211 11277888899999999999999999999999999999974 3568999999988654321
Q ss_pred ---ccccccCCcccCchhhcCCC--CCchhhHHHHHHHHHHHHhCCCCCCCChHHH-HHHHHHhhcCCCcHHHHhhhhhh
Q 004954 577 ---LCLYVQSRSYRAPEVIIGLP--YDQKIDLWSLGCILAELWTGEVLFPNDAVVM-ILARIIGMLGPIDLEMLMQGQEI 650 (722)
Q Consensus 577 ---~~~~~gt~~y~APE~l~~~~--~s~ksDIWSLGviL~elltG~~PF~~~~~~e-~l~~i~~~lg~~~~~~~~~~~~~ 650 (722)
.....+++.|+|||.+.+.. ++.++|+||||+++|+|++|..||....... ....+. .
T Consensus 163 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~-~--------------- 226 (268)
T cd06624 163 NPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVG-M--------------- 226 (268)
T ss_pred CCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhh-h---------------
Confidence 22345788999999987643 7889999999999999999999996532111 100000 0
Q ss_pred hhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCC
Q 004954 651 YKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 718 (722)
Q Consensus 651 ~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf 718 (722)
......+| ...++.+.+||++||+.+|.+|||+.|++.||||
T Consensus 227 -----------------~~~~~~~~---------~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 268 (268)
T cd06624 227 -----------------FKIHPEIP---------ESLSAEAKNFILRCFEPDPDKRASAHDLLQDPFL 268 (268)
T ss_pred -----------------hccCCCCC---------cccCHHHHHHHHHHcCCCchhCCCHHHHHhCCCC
Confidence 00000111 1234678999999999999999999999999997
No 261
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=5.7e-34 Score=296.27 Aligned_cols=248 Identities=21% Similarity=0.300 Sum_probs=199.7
Q ss_pred eecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCe
Q 004954 411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 490 (722)
Q Consensus 411 ~l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~ 490 (722)
+..++|++.+.||+|++|.||++.+. .++.||+|.++........+.+|+.+++.++ |+||+++++++...+.
T Consensus 3 ~~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~ 75 (261)
T cd05068 3 IDRTSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTMDPKDFLAEAQIMKKLR------HPKLIQLYAVCTLEEP 75 (261)
T ss_pred cchhheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCcccHHHHHHHHHHHHHCC------CCCccceeEEEecCCC
Confidence 34578999999999999999999964 4578999999866544566788888888875 6799999999999999
Q ss_pred EEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCC
Q 004954 491 LFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS 569 (722)
Q Consensus 491 l~iVmEy~~-gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGl 569 (722)
.++||||+. ++|.+++.... ...+++..+..++.|++.||.+||+.||+|+||||+||+++. ++.++|+|||+
T Consensus 76 ~~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~--~~~~~l~dfg~ 149 (261)
T cd05068 76 IYIVTELMKYGSLLEYLQGGA----GRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGE--NNICKVADFGL 149 (261)
T ss_pred eeeeeecccCCcHHHHHhccC----CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcC--CCCEEECCcce
Confidence 999999995 67877775432 123889999999999999999999999999999999999996 77899999999
Q ss_pred cccccCCccc-cc---cCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHHHH
Q 004954 570 SCFQTDNLCL-YV---QSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEML 644 (722)
Q Consensus 570 s~~~~~~~~~-~~---gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~~i~~~lg~~~~~~~ 644 (722)
+......... .. .+..|+|||.+.+..++.++||||||+++|+|++ |+.||.+......+..+.....
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~------- 222 (261)
T cd05068 150 ARVIKEDIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGYR------- 222 (261)
T ss_pred EEEccCCcccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC-------
Confidence 8765433211 12 2357999999998899999999999999999999 9999988766555544431100
Q ss_pred hhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHh
Q 004954 645 MQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 714 (722)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~ 714 (722)
...+ ...+..+.++|.+||+.+|.+||++.++++
T Consensus 223 ---------------------------~~~~---------~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~ 256 (261)
T cd05068 223 ---------------------------MPCP---------PGCPKELYDIMLDCWKEDPDDRPTFETLQW 256 (261)
T ss_pred ---------------------------CCCC---------CcCCHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence 0000 112356889999999999999999999975
No 262
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-35 Score=324.74 Aligned_cols=246 Identities=29% Similarity=0.443 Sum_probs=197.7
Q ss_pred EeccCCCCceEEEEECCCCcEEEEEEeec-chhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEEEccc
Q 004954 421 YLGSAAFSKVFQAQDLHTGVDVCLKIIKN-DKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLR 499 (722)
Q Consensus 421 ~LG~G~fG~Vy~a~d~~tg~~vAvKil~~-~~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~iVmEy~~ 499 (722)
+||+|.||+||-|+|..+...+|||-+.. +....+-...|+.+.+.|+| .|||+++|.+..++++-|.||-++
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrH------kNIVrYLGs~senGf~kIFMEqVP 655 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRH------KNIVRYLGSVSENGFFKIFMEQVP 655 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhh------HhHHHHhhccCCCCeEEEEeecCC
Confidence 69999999999999999999999998864 44455667788889888874 589999999999999999999998
Q ss_pred cc-hHHHHhhhhccCCCccc--CHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCcccccC-
Q 004954 500 AN-LYEFQKFNQESGGEAYF--TLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTD- 575 (722)
Q Consensus 500 gs-Ll~~l~~~~~~~~~~~l--s~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~~- 575 (722)
|+ |-++++..-. ++ .+.++..+.+||++||.|||++.|||||||-+||||+. -.|.+||+|||-++....
T Consensus 656 GGSLSsLLrskWG-----PlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNT-ySGvlKISDFGTsKRLAgi 729 (1226)
T KOG4279|consen 656 GGSLSSLLRSKWG-----PLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNT-YSGVLKISDFGTSKRLAGI 729 (1226)
T ss_pred CCcHHHHHHhccC-----CCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEee-ccceEEecccccchhhccC
Confidence 64 5555553322 24 78889999999999999999999999999999999986 368999999998876532
Q ss_pred --CccccccCCcccCchhhcCC--CCCchhhHHHHHHHHHHHHhCCCCCCCC-hHHHHHHHHHhhcCCCcHHHHhhhhhh
Q 004954 576 --NLCLYVQSRSYRAPEVIIGL--PYDQKIDLWSLGCILAELWTGEVLFPND-AVVMILARIIGMLGPIDLEMLMQGQEI 650 (722)
Q Consensus 576 --~~~~~~gt~~y~APE~l~~~--~~s~ksDIWSLGviL~elltG~~PF~~~-~~~e~l~~i~~~lg~~~~~~~~~~~~~ 650 (722)
-..++.||..|||||++..+ .|+.++|||||||++.||.||++||... ++...+.++ ++
T Consensus 730 nP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkV-Gm--------------- 793 (1226)
T KOG4279|consen 730 NPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKV-GM--------------- 793 (1226)
T ss_pred CccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhh-cc---------------
Confidence 23457899999999999765 4889999999999999999999999543 222222111 00
Q ss_pred hhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCCC
Q 004954 651 YKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 720 (722)
Q Consensus 651 ~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~~ 720 (722)
-+....+|+. .+++.+.||.+|+.++|.+||+|.++|++||++.
T Consensus 794 -----------------yKvHP~iPee---------lsaeak~FilrcFepd~~~R~sA~~LL~DpFlq~ 837 (1226)
T KOG4279|consen 794 -----------------YKVHPPIPEE---------LSAEAKNFILRCFEPDPCDRPSAKDLLQDPFLQH 837 (1226)
T ss_pred -----------------eecCCCCcHH---------HHHHHHHHHHHHcCCCcccCccHHHhccCccccc
Confidence 0111222321 2356789999999999999999999999999985
No 263
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=6.2e-34 Score=295.91 Aligned_cols=245 Identities=20% Similarity=0.327 Sum_probs=195.4
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEE
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFI 493 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~i 493 (722)
++|++.+.||+|+||+||++.+.. +..+|+|.+.......+.+.+|+.+++.++ ||||+++++++...+..++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~~~l 76 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMSEDEFIEEAKVMMKLS------HEKLVQLYGVCTKQRPIYI 76 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCcccHHHHHHHHHHHhcCC------CCCeeeEEEEEccCCCcEE
Confidence 579999999999999999998643 456999988765444456778888887664 7899999999998899999
Q ss_pred EEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCccc
Q 004954 494 VCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF 572 (722)
Q Consensus 494 VmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~ 572 (722)
||||+.+ +|.+++..... .+++..++.++.||+.||+|||+.|++|+||||+||+++. ++.+||+|||.+..
T Consensus 77 v~e~~~~~~l~~~i~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~--~~~~kl~d~g~~~~ 149 (256)
T cd05113 77 VTEYMSNGCLLNYLREHGK-----RFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDD--QGCVKVSDFGLSRY 149 (256)
T ss_pred EEEcCCCCcHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcC--CCCEEECCCcccee
Confidence 9999975 57666653221 3889999999999999999999999999999999999985 77899999998865
Q ss_pred ccCCcc----ccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 004954 573 QTDNLC----LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 647 (722)
Q Consensus 573 ~~~~~~----~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~ 647 (722)
...... ...++..|+|||.+.+..++.++|||||||++|+|++ |..||...+..+....+......
T Consensus 150 ~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~--------- 220 (256)
T cd05113 150 VLDDEYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLRL--------- 220 (256)
T ss_pred cCCCceeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCCC---------
Confidence 433221 1234567999999998889999999999999999998 99999876655554444321110
Q ss_pred hhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhC
Q 004954 648 QEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 715 (722)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~H 715 (722)
..+ ...+..+.+++.+||+.+|.+|||+.+++++
T Consensus 221 -------------------------~~~---------~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~ 254 (256)
T cd05113 221 -------------------------YRP---------HLASEKVYAIMYSCWHEKAEERPTFQQLLSS 254 (256)
T ss_pred -------------------------CCC---------CCCCHHHHHHHHHHcCCCcccCCCHHHHHHh
Confidence 001 1124668999999999999999999999975
No 264
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=1.1e-33 Score=291.10 Aligned_cols=247 Identities=30% Similarity=0.448 Sum_probs=202.0
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 004954 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (722)
Q Consensus 415 rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~---~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (722)
+|++.+.||+|++|.||++++..+++.+++|.+.... ...+.+.+|++++..++ |+|++++++++......
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~ 74 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLK------HPNIVKYIGSIETSDSL 74 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCC------CCCccEEEEEEEeCCEE
Confidence 5899999999999999999999999999999987654 34556777888877774 67999999999999999
Q ss_pred EEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCc
Q 004954 492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (722)
Q Consensus 492 ~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 570 (722)
++||||+.+ +|.+++... ..+++..++.++.|++.||.+||+.||+|+||+|+||+++. ++.++|+|||.+
T Consensus 75 ~~v~e~~~~~~L~~~~~~~------~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~--~~~~~l~d~~~~ 146 (254)
T cd06627 75 YIILEYAENGSLRQIIKKF------GPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTK--DGVVKLADFGVA 146 (254)
T ss_pred EEEEecCCCCcHHHHHHhc------cCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECC--CCCEEEeccccc
Confidence 999999986 666665533 23889999999999999999999999999999999999996 788999999998
Q ss_pred ccccCCcc---ccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 004954 571 CFQTDNLC---LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 647 (722)
Q Consensus 571 ~~~~~~~~---~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~ 647 (722)
........ ...++..|+|||.+.+..++.++||||||+++|+|++|..||...........+...
T Consensus 147 ~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~------------ 214 (254)
T cd06627 147 TKLNDVSKDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQD------------ 214 (254)
T ss_pred eecCCCcccccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcc------------
Confidence 76554332 346788999999998888899999999999999999999999765433322222100
Q ss_pred hhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCC
Q 004954 648 QEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 718 (722)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf 718 (722)
....++ ...+..+.++|.+||..+|++|||+.+++.||||
T Consensus 215 ----------------------~~~~~~---------~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~~ 254 (254)
T cd06627 215 ----------------------DHPPLP---------EGISPELKDFLMQCFQKDPNLRPTAKQLLKHPWI 254 (254)
T ss_pred ----------------------CCCCCC---------CCCCHHHHHHHHHHHhCChhhCcCHHHHhcCCCC
Confidence 000011 1224678899999999999999999999999997
No 265
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=6.6e-34 Score=296.77 Aligned_cols=246 Identities=24% Similarity=0.325 Sum_probs=194.9
Q ss_pred ecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 004954 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (722)
Q Consensus 412 l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (722)
..++|++.++||+|+||.||+|++..+ ..+|+|+++........+.+|+.+++.++ |+||+++++.+. ....
T Consensus 4 ~~~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~~~~~~~~E~~~l~~l~------~~~i~~~~~~~~-~~~~ 75 (262)
T cd05071 4 PRESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQVMKKLR------HEKLVQLYAVVS-EEPI 75 (262)
T ss_pred ChHHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCccCHHHHHHHHHHHHhCC------CCCcceEEEEEC-CCCc
Confidence 457899999999999999999998655 46999999865444456778888888774 679999999874 4568
Q ss_pred EEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCc
Q 004954 492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (722)
Q Consensus 492 ~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 570 (722)
++||||+.+ +|.+++.... ...+++..+..++.|++.||+|||+.+++|+||||+||+++. ++.++|+|||.+
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~--~~~~~L~dfg~~ 149 (262)
T cd05071 76 YIVTEYMSKGSLLDFLKGEM----GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGE--NLVCKVADFGLA 149 (262)
T ss_pred EEEEEcCCCCcHHHHHhhcc----ccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcC--CCcEEeccCCce
Confidence 999999985 7777775322 123788999999999999999999999999999999999985 788999999998
Q ss_pred ccccCCcc----ccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHHHHh
Q 004954 571 CFQTDNLC----LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLM 645 (722)
Q Consensus 571 ~~~~~~~~----~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~~i~~~lg~~~~~~~~ 645 (722)
........ ...++..|+|||++.+..++.++|||||||++|+|++ |..||.+....+....+.....
T Consensus 150 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~-------- 221 (262)
T cd05071 150 RLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR-------- 221 (262)
T ss_pred eeccccccccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCCC--------
Confidence 75543322 1234667999999998889999999999999999999 8999987765554444321100
Q ss_pred hhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHh
Q 004954 646 QGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 714 (722)
Q Consensus 646 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~ 714 (722)
.+. ....+..+.+||.+||+.||++||++.++++
T Consensus 222 ----------------------------~~~-------~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~ 255 (262)
T cd05071 222 ----------------------------MPC-------PPECPESLHDLMCQCWRKEPEERPTFEYLQA 255 (262)
T ss_pred ----------------------------CCC-------ccccCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 000 0112456889999999999999999999875
No 266
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=5.1e-34 Score=297.37 Aligned_cols=249 Identities=19% Similarity=0.271 Sum_probs=193.4
Q ss_pred EEEEEEeccCCCCceEEEEECC---CCcEEEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 004954 416 YYVTEYLGSAAFSKVFQAQDLH---TGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (722)
Q Consensus 416 Y~i~~~LG~G~fG~Vy~a~d~~---tg~~vAvKil~~~~---~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (722)
|++.+.||+|+||.||+|.+.. ++..+|+|+++... .....+.+|+.+++.+. |+||+++++++....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~iv~~~~~~~~~~ 74 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFD------HPNVMKLIGVCFEAS 74 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCC------CCCeeeEEeeeccCC
Confidence 5788999999999999998754 34789999987542 23456677888777764 789999999887654
Q ss_pred e------EEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeE
Q 004954 490 H------LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI 562 (722)
Q Consensus 490 ~------l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~v 562 (722)
. .++||||+.+ +|..++...........+++..++.++.|++.||.|||+.+++||||||+||+++. ++.+
T Consensus 75 ~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~--~~~~ 152 (273)
T cd05035 75 SLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLRE--DMTV 152 (273)
T ss_pred ccccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECC--CCeE
Confidence 4 7999999985 66666544332222345899999999999999999999999999999999999985 7889
Q ss_pred EEEecCCcccccCCcc-----ccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhc
Q 004954 563 KIIDLGSSCFQTDNLC-----LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGML 636 (722)
Q Consensus 563 kL~DFGls~~~~~~~~-----~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~~i~~~l 636 (722)
||+|||++........ ....+..|+|||.+.+..++.++|||||||++|||++ |.+||.+....+.+..+....
T Consensus 153 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~~ 232 (273)
T cd05035 153 CVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGN 232 (273)
T ss_pred EECCccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC
Confidence 9999999875443221 1234667999999988889999999999999999999 999998776655544432110
Q ss_pred CCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhC
Q 004954 637 GPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 715 (722)
Q Consensus 637 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~H 715 (722)
....| ...+..+.++|.+||+.||.+|||+.|++++
T Consensus 233 ----------------------------------~~~~~---------~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~ 268 (273)
T cd05035 233 ----------------------------------RLKQP---------EDCLDELYDLMYSCWRADPKDRPTFTKLREV 268 (273)
T ss_pred ----------------------------------CCCCC---------cCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 00011 1234568899999999999999999999875
No 267
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=7.1e-34 Score=295.39 Aligned_cols=248 Identities=23% Similarity=0.336 Sum_probs=198.5
Q ss_pred ceecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 004954 410 TVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (722)
Q Consensus 410 ~~l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (722)
++..++|+++++||+|+||.||+|.+ .+++.+|+|.+.........+.+|+.+++.++ |+||+++++++ ..+
T Consensus 2 ~~~~~~~~~~~~ig~G~~g~v~~~~~-~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~------h~~i~~~~~~~-~~~ 73 (260)
T cd05067 2 EVPRETLKLVKKLGAGQFGEVWMGYY-NGHTKVAIKSLKQGSMSPEAFLAEANLMKQLQ------HPRLVRLYAVV-TQE 73 (260)
T ss_pred ccchHHceeeeeeccCccceEEeeec-CCCceEEEEEecCCCCcHHHHHHHHHHHHhcC------CcCeeeEEEEE-ccC
Confidence 34567899999999999999999985 46788999999876655567888998888875 67999999986 456
Q ss_pred eEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecC
Q 004954 490 HLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (722)
Q Consensus 490 ~l~iVmEy~~-gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFG 568 (722)
..++||||+. ++|.+.+.... ...++...+..++.|++.||+|||+.|++|+||||+||+++. ++.++|+|||
T Consensus 74 ~~~~v~e~~~~~~L~~~~~~~~----~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~--~~~~~l~dfg 147 (260)
T cd05067 74 PIYIITEYMENGSLVDFLKTPE----GIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSE--TLCCKIADFG 147 (260)
T ss_pred CcEEEEEcCCCCCHHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcC--CCCEEEccCc
Confidence 7899999997 56777665332 223888999999999999999999999999999999999996 7889999999
Q ss_pred CcccccCCc----cccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHHH
Q 004954 569 SSCFQTDNL----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEM 643 (722)
Q Consensus 569 ls~~~~~~~----~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~~i~~~lg~~~~~~ 643 (722)
++....... ....++..|+|||++.+..++.++||||||+++|+|++ |++||.+.+..+....+.....
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~------ 221 (260)
T cd05067 148 LARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYR------ 221 (260)
T ss_pred ceeecCCCCcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCCC------
Confidence 987654221 12234678999999998889999999999999999999 9999987765555444321100
Q ss_pred HhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHh
Q 004954 644 LMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 714 (722)
Q Consensus 644 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~ 714 (722)
...+ ...+..+.++|.+||..+|++|||++++++
T Consensus 222 ----------------------------~~~~---------~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05067 222 ----------------------------MPRP---------DNCPEELYELMRLCWKEKPEERPTFEYLRS 255 (260)
T ss_pred ----------------------------CCCC---------CCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 0001 112456899999999999999999999985
No 268
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=7.7e-34 Score=301.92 Aligned_cols=252 Identities=19% Similarity=0.249 Sum_probs=197.2
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCc--EEEEEEeecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGV--DVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~--~vAvKil~~~--~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (722)
++|++.+.||+|+||.||+|.+..++. .+++|.++.. ......+.+|+.++.++. .||||+++++++...+
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~-----~hp~iv~~~~~~~~~~ 76 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLG-----HHPNIINLLGACENRG 76 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhc-----CCCchhheEEEEccCC
Confidence 579999999999999999999877765 4688887642 233456777888888774 3789999999999999
Q ss_pred eEEEEEEccc-cchHHHHhhhhccC----------CCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccC
Q 004954 490 HLFIVCELLR-ANLYEFQKFNQESG----------GEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQ 558 (722)
Q Consensus 490 ~l~iVmEy~~-gsLl~~l~~~~~~~----------~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~ 558 (722)
..++||||+. ++|.+++....... ....+++..++.++.||+.||+|||+.||+||||||+|||++.
T Consensus 77 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~-- 154 (297)
T cd05089 77 YLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGE-- 154 (297)
T ss_pred cceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECC--
Confidence 9999999997 57877776433211 1134889999999999999999999999999999999999985
Q ss_pred CCeEEEEecCCcccccCCccc--cccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhh
Q 004954 559 RCEIKIIDLGSSCFQTDNLCL--YVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGM 635 (722)
Q Consensus 559 ~~~vkL~DFGls~~~~~~~~~--~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~~i~~~ 635 (722)
++.+||+|||++......... ...+..|+|||++.+..++.++|||||||++|+|++ |..||......+....+...
T Consensus 155 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~ 234 (297)
T cd05089 155 NLASKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQG 234 (297)
T ss_pred CCeEEECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcC
Confidence 788999999998643322221 222456999999998889999999999999999997 99999877665544433211
Q ss_pred cCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhC
Q 004954 636 LGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 715 (722)
Q Consensus 636 lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~H 715 (722)
. ...+| ...+..+.+||.+||+.+|.+|||++++++.
T Consensus 235 ~----------------------------------~~~~~---------~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~ 271 (297)
T cd05089 235 Y----------------------------------RMEKP---------RNCDDEVYELMRQCWRDRPYERPPFAQISVQ 271 (297)
T ss_pred C----------------------------------CCCCC---------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 0 00011 1234668899999999999999999999764
No 269
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=5.6e-34 Score=295.78 Aligned_cols=245 Identities=21% Similarity=0.340 Sum_probs=196.3
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEE
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFI 493 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~i 493 (722)
.+|++.+.||+|+||.||++.+. ++..+|+|++.......+.+.+|+.+++.++ |+||+++++++...+..++
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~~l 76 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAMSEDDFIEEAKVMMKLS------HPNLVQLYGVCTKQRPIFI 76 (256)
T ss_pred HHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCCCHHHHHHHHHHHHhCC------CCCEEEEEEEEcCCCceEE
Confidence 46889999999999999999875 5678999998764444456778888888764 7899999999999999999
Q ss_pred EEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCccc
Q 004954 494 VCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF 572 (722)
Q Consensus 494 VmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~ 572 (722)
||||+++ +|.+++..... .+++..++.++.||+.||+|||+.|++||||||+||+++. ++.+||+|||++..
T Consensus 77 v~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~--~~~~kl~dfg~~~~ 149 (256)
T cd05059 77 VTEYMANGCLLNYLRERKG-----KLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGE--DNVVKVSDFGLARY 149 (256)
T ss_pred EEecCCCCCHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECC--CCcEEECCccccee
Confidence 9999975 67777654322 3889999999999999999999999999999999999996 78899999999876
Q ss_pred ccCCccc----cccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 004954 573 QTDNLCL----YVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 647 (722)
Q Consensus 573 ~~~~~~~----~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~ 647 (722)
....... ..++..|+|||.+.+..++.++||||||+++|+|++ |..||...+..+....+....
T Consensus 150 ~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~----------- 218 (256)
T cd05059 150 VLDDQYTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGY----------- 218 (256)
T ss_pred cccccccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCC-----------
Confidence 5432211 122357999999999899999999999999999999 899998766555444432110
Q ss_pred hhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhC
Q 004954 648 QEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 715 (722)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~H 715 (722)
....| ...+..+.+++.+||..+|++|||+.++++.
T Consensus 219 -----------------------~~~~~---------~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~ 254 (256)
T cd05059 219 -----------------------RLYRP---------KLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQ 254 (256)
T ss_pred -----------------------cCCCC---------CCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 00011 1234678999999999999999999999974
No 270
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=1.8e-34 Score=299.67 Aligned_cols=250 Identities=26% Similarity=0.402 Sum_probs=196.2
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch------hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec
Q 004954 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK------DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 488 (722)
Q Consensus 415 rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~------~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~ 488 (722)
||.+.+.||+|+||+||++.+..++..+++|+++... ....+...|..+++.++ ||||+++++.+...
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~ 74 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLD------HPAIVKFHASFLER 74 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCC------CCcHHHHHHHHhcC
Confidence 6899999999999999999998888878888775421 12234455666666654 78999999999999
Q ss_pred CeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEec
Q 004954 489 EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDL 567 (722)
Q Consensus 489 ~~l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DF 567 (722)
...++||||+.+ +|.+.+...... ...+++..++.++.|++.||.|||+.|++|+||+|+||+++ ++.++|+||
T Consensus 75 ~~~~lv~e~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~---~~~~~l~d~ 149 (260)
T cd08222 75 DAFCIITEYCEGRDLDCKLEELKHT--GKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLK---NNLLKIGDF 149 (260)
T ss_pred CceEEEEEeCCCCCHHHHHHHHhhc--ccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEee---cCCEeeccc
Confidence 999999999985 565555432211 23489999999999999999999999999999999999997 456999999
Q ss_pred CCcccccCC---ccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHH
Q 004954 568 GSSCFQTDN---LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEML 644 (722)
Q Consensus 568 Gls~~~~~~---~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~ 644 (722)
|.+...... .....+++.|+|||.+.+..++.++|+||||+++|+|++|..||...........+... .
T Consensus 150 g~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~------ 221 (260)
T cd08222 150 GVSRLLMGSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEG--P------ 221 (260)
T ss_pred CceeecCCCcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHcC--C------
Confidence 988655332 22345788999999998888899999999999999999999999776554444333210 0
Q ss_pred hhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCC
Q 004954 645 MQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 718 (722)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf 718 (722)
.+. .....+..+.++|.+||+.+|++||++.++++||||
T Consensus 222 -----------------------------~~~------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 260 (260)
T cd08222 222 -----------------------------TPS------LPETYSRQLNSIMQSMLNKDPSLRPSAAEILRNPFI 260 (260)
T ss_pred -----------------------------CCC------CcchhcHHHHHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence 000 001223568899999999999999999999999997
No 271
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=3.5e-34 Score=296.23 Aligned_cols=244 Identities=32% Similarity=0.466 Sum_probs=197.6
Q ss_pred eccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEEEc
Q 004954 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCEL 497 (722)
Q Consensus 422 LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~----~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~iVmEy 497 (722)
||.|+||.||++++..+|+.+++|++.... .....+.+|+.+++.++ |+||+++++.+......++||||
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~------h~~i~~~~~~~~~~~~~~lv~e~ 74 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQ------SPYVVKLYYSFQGKKNLYLVMEY 74 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCC------CcchhHHHHheecCcEEEEEEec
Confidence 689999999999999899999999987543 23455666777777664 78999999999999999999999
Q ss_pred ccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCcccccCC
Q 004954 498 LRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDN 576 (722)
Q Consensus 498 ~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~~~ 576 (722)
+.+ +|.+++.... .+++..++.++.||+.||+|||+.|++|+||+|+||+++. ++.++|+|||++......
T Consensus 75 ~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~--~~~~~l~dfg~~~~~~~~ 146 (265)
T cd05579 75 LPGGDLASLLENVG------SLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDS--NGHLKLTDFGLSKVGLVR 146 (265)
T ss_pred CCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcC--CCCEEEEecccchhcccC
Confidence 975 6766665322 3899999999999999999999999999999999999996 788999999987654322
Q ss_pred -----------ccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHh
Q 004954 577 -----------LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLM 645 (722)
Q Consensus 577 -----------~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~ 645 (722)
.....++..|+|||.+....++.++|+||||+++|+|++|..||......+....+....
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~--------- 217 (265)
T cd05579 147 RQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGK--------- 217 (265)
T ss_pred cccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC---------
Confidence 123457888999999998889999999999999999999999998776655554443100
Q ss_pred hhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCH---HHHHhCCCCCCC
Q 004954 646 QGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTA---REALDHPWLQHP 721 (722)
Q Consensus 646 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa---~ElL~HPwf~~~ 721 (722)
...|... ..+..+.+||++||+.+|.+|||+ .++|+||||++.
T Consensus 218 --------------------------~~~~~~~-------~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~~ 263 (265)
T cd05579 218 --------------------------IEWPEDV-------EVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKGI 263 (265)
T ss_pred --------------------------cCCCccc-------cCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCccccCC
Confidence 0001100 024668899999999999999999 999999999864
No 272
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=1.4e-33 Score=292.87 Aligned_cols=248 Identities=24% Similarity=0.317 Sum_probs=200.8
Q ss_pred eecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCe
Q 004954 411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 490 (722)
Q Consensus 411 ~l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~ 490 (722)
+..++|++.+.||+|+||.||++.+. .++.+|||.+.........+.+|+.+++.++ |+||+++++++.....
T Consensus 3 ~~~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~ 75 (261)
T cd05034 3 IPRESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTMSPEAFLQEAQIMKKLR------HDKLVQLYAVCSEEEP 75 (261)
T ss_pred cchhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCccCHHHHHHHHHHHhhCC------CCCEeeeeeeeecCCc
Confidence 45678999999999999999999975 5678999999876555567888888888775 6799999999998899
Q ss_pred EEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCC
Q 004954 491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS 569 (722)
Q Consensus 491 l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGl 569 (722)
.++||||+.+ +|.+++.... ...+++..+..++.||+.||.|||++|++|+||||+||+++. ++.++|+|||+
T Consensus 76 ~~~v~e~~~~~~L~~~i~~~~----~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~--~~~~~l~d~g~ 149 (261)
T cd05034 76 IYIVTEYMSKGSLLDFLKSGE----GKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGE--NLVCKIADFGL 149 (261)
T ss_pred eEEEEeccCCCCHHHHHhccc----cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcC--CCCEEECcccc
Confidence 9999999975 6777765432 123889999999999999999999999999999999999996 78899999999
Q ss_pred cccccCCcc----ccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHHHH
Q 004954 570 SCFQTDNLC----LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEML 644 (722)
Q Consensus 570 s~~~~~~~~----~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~~i~~~lg~~~~~~~ 644 (722)
+........ ....+..|+|||.+.+..++.++||||||+++|+|++ |+.||.+.+....+..+.....
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~------- 222 (261)
T cd05034 150 ARLIEDDEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYR------- 222 (261)
T ss_pred ceeccchhhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC-------
Confidence 876543211 1223567999999999889999999999999999998 9999988766665555432110
Q ss_pred hhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHh
Q 004954 645 MQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 714 (722)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~ 714 (722)
...+ ...+..+.++|.+||+.+|++||+++++++
T Consensus 223 ---------------------------~~~~---------~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 256 (261)
T cd05034 223 ---------------------------MPRP---------PNCPEELYDLMLQCWDKDPEERPTFEYLQS 256 (261)
T ss_pred ---------------------------CCCC---------CCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 0001 012356889999999999999999999874
No 273
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=8.8e-34 Score=292.44 Aligned_cols=251 Identities=27% Similarity=0.375 Sum_probs=202.2
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 004954 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (722)
Q Consensus 415 rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~---~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (722)
+|++.+.||+|++|.||++++..+++.+|+|.+.... .......+|+++++.++ |+||+++++++......
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~ 74 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVN------HPNIISYKEAFLDGNKL 74 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCC------CCCchhhhhhhccCCEE
Confidence 5899999999999999999999999999999987532 22345556777777664 67999999999999999
Q ss_pred EEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCc
Q 004954 492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (722)
Q Consensus 492 ~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 570 (722)
++||||+++ +|..++..... ....+++..++.++.|++.||+|||+.|++|+||+|+||+++. ++.+||+|||++
T Consensus 75 ~~v~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~--~~~~kl~d~g~~ 150 (256)
T cd08530 75 CIVMEYAPFGDLSKAISKRKK--KRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVA--NDLVKIGDLGIS 150 (256)
T ss_pred EEEehhcCCCCHHHHHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEec--CCcEEEeeccch
Confidence 999999975 66666654322 1234889999999999999999999999999999999999996 778999999998
Q ss_pred ccccCC-ccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhh
Q 004954 571 CFQTDN-LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQE 649 (722)
Q Consensus 571 ~~~~~~-~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~~ 649 (722)
...... .....+++.|+|||.+.+..++.++|+||||+++|+|++|+.||...+..+....+...
T Consensus 151 ~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~-------------- 216 (256)
T cd08530 151 KVLKKNMAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRG-------------- 216 (256)
T ss_pred hhhccCCcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC--------------
Confidence 765443 22245788999999999989999999999999999999999999876654443332210
Q ss_pred hhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCC
Q 004954 650 IYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 718 (722)
Q Consensus 650 ~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf 718 (722)
..+.. ....+..++++|.+||+.+|.+|||+.++|+||++
T Consensus 217 -----------------------~~~~~------~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~p~~ 256 (256)
T cd08530 217 -----------------------KYPPI------PPIYSQDLQNFIRSMLQVKPKLRPNCDKILASPAV 256 (256)
T ss_pred -----------------------CCCCC------chhhCHHHHHHHHHHcCCCcccCCCHHHHhcCCCC
Confidence 00000 00124568999999999999999999999999985
No 274
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=7.8e-34 Score=295.10 Aligned_cols=247 Identities=23% Similarity=0.331 Sum_probs=196.5
Q ss_pred eecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCe
Q 004954 411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 490 (722)
Q Consensus 411 ~l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~ 490 (722)
+..++|++.+.||+|+||.||++.+. .+..+|+|.+.......+.+.+|+.+++.++ |++|+++++++. ...
T Consensus 3 ~~~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~------~~~i~~~~~~~~-~~~ 74 (260)
T cd05070 3 IPRESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTMSPESFLEEAQIMKKLR------HDKLVQLYAVVS-EEP 74 (260)
T ss_pred CchHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCCCHHHHHHHHHHHHhcC------CCceEEEEeEEC-CCC
Confidence 45678999999999999999999865 5677999999875555567788998888875 679999999875 456
Q ss_pred EEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCC
Q 004954 491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS 569 (722)
Q Consensus 491 l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGl 569 (722)
.++||||+.+ +|.+++.... ...+++..++.++.|++.||+|||+.+|+|+||||+||+++. ++.++|+|||+
T Consensus 75 ~~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~--~~~~~l~dfg~ 148 (260)
T cd05070 75 IYIVTEYMSKGSLLDFLKDGE----GRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGD--GLVCKIADFGL 148 (260)
T ss_pred cEEEEEecCCCcHHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeC--CceEEeCCcee
Confidence 8999999975 6777665322 223889999999999999999999999999999999999985 78899999999
Q ss_pred cccccCCcc----ccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHHHH
Q 004954 570 SCFQTDNLC----LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEML 644 (722)
Q Consensus 570 s~~~~~~~~----~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~~i~~~lg~~~~~~~ 644 (722)
+........ ...++..|+|||.+.+..++.++||||||+++|+|++ |.+||.+.+..+....+....
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~-------- 220 (260)
T cd05070 149 ARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGY-------- 220 (260)
T ss_pred eeeccCcccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC--------
Confidence 876543321 1234567999999988889999999999999999999 999998776555554432110
Q ss_pred hhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHh
Q 004954 645 MQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 714 (722)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~ 714 (722)
....+ ...+..+.+||.+||+.+|++|||+.++++
T Consensus 221 --------------------------~~~~~---------~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 255 (260)
T cd05070 221 --------------------------RMPCP---------QDCPISLHELMLQCWKKDPEERPTFEYLQS 255 (260)
T ss_pred --------------------------CCCCC---------CcCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 00001 122456899999999999999999999874
No 275
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-35 Score=299.27 Aligned_cols=256 Identities=29% Similarity=0.453 Sum_probs=201.3
Q ss_pred CcEEEE-EEeccCCCCceEEEEECCCCcEEEEEEeecch-hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 004954 414 GRYYVT-EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (722)
Q Consensus 414 ~rY~i~-~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~-~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (722)
+-|++. +.||+|+|+.|-.+....+|..||||++.+.. ....+..+|++++...+ +|+||++++++|+++..+
T Consensus 77 d~YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cq-----gh~nilqLiefFEdd~~F 151 (463)
T KOG0607|consen 77 DMYKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQ-----GHKNILQLIEFFEDDTRF 151 (463)
T ss_pred HHHHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhc-----CCccHHHHHHHhcccceE
Confidence 345554 47999999999999999999999999997643 34567889999998887 588999999999999999
Q ss_pred EEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcc-cCCCeEEEEecCC
Q 004954 492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKS-YQRCEIKIIDLGS 569 (722)
Q Consensus 492 ~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~-~~~~~vkL~DFGl 569 (722)
|+|||-|.| .|+.-+.... .|++.++.++++.|+.||.|||.+||.||||||+|||... +.-.-|||+||.+
T Consensus 152 YLVfEKm~GGplLshI~~~~------~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDL 225 (463)
T KOG0607|consen 152 YLVFEKMRGGPLLSHIQKRK------HFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDL 225 (463)
T ss_pred EEEEecccCchHHHHHHHhh------hccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeecccc
Confidence 999999986 5666555433 3999999999999999999999999999999999999864 2335699999987
Q ss_pred ccccc----------CCccccccCCcccCchhhc-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCh----------
Q 004954 570 SCFQT----------DNLCLYVQSRSYRAPEVII-----GLPYDQKIDLWSLGCILAELWTGEVLFPNDA---------- 624 (722)
Q Consensus 570 s~~~~----------~~~~~~~gt~~y~APE~l~-----~~~~s~ksDIWSLGviL~elltG~~PF~~~~---------- 624 (722)
+.... ....+.+|+..|||||++. ...|+.+.|+||||||+|-||.|.+||.+.=
T Consensus 226 gSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe 305 (463)
T KOG0607|consen 226 GSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGE 305 (463)
T ss_pred ccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCC
Confidence 64211 1233467788899999974 2358899999999999999999999996531
Q ss_pred -----HHHHHHHHHhhcCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhc
Q 004954 625 -----VVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLL 699 (722)
Q Consensus 625 -----~~e~l~~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL 699 (722)
...++..|. ...+.+|.... . ..+.+.++||+.+|
T Consensus 306 ~Cr~CQ~~LFesIQ-----------------------------------EGkYeFPdkdW--a---hIS~eakdlisnLl 345 (463)
T KOG0607|consen 306 VCRVCQNKLFESIQ-----------------------------------EGKYEFPDKDW--A---HISSEAKDLISNLL 345 (463)
T ss_pred ccHHHHHHHHHHHh-----------------------------------ccCCcCChhhh--H---HhhHHHHHHHHHHH
Confidence 112222222 22333443211 1 11356789999999
Q ss_pred ccCCCCCcCHHHHHhCCCCCC
Q 004954 700 EINPQRRPTAREALDHPWLQH 720 (722)
Q Consensus 700 ~~dP~kRpTa~ElL~HPwf~~ 720 (722)
..++..|.+|.++|+|||++.
T Consensus 346 vrda~~rlsa~~vlnhPw~~~ 366 (463)
T KOG0607|consen 346 VRDAKQRLSAAQVLNHPWVQR 366 (463)
T ss_pred hccHHhhhhhhhccCCccccc
Confidence 999999999999999999975
No 276
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=8.1e-34 Score=296.35 Aligned_cols=248 Identities=19% Similarity=0.258 Sum_probs=191.3
Q ss_pred EEEEEeccCCCCceEEEEECCCCc--EEEEEEeecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec---
Q 004954 417 YVTEYLGSAAFSKVFQAQDLHTGV--DVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL--- 488 (722)
Q Consensus 417 ~i~~~LG~G~fG~Vy~a~d~~tg~--~vAvKil~~~---~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~--- 488 (722)
.+.++||+|+||.||+|++..++. .+|+|.++.. ......+.+|..+++.++ |+||+++++.+...
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~~~~~~ 75 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFD------HPNVMRLIGVCLQTVES 75 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCC------CCCcceEEEEEccCCcc
Confidence 467889999999999999877765 6899988653 333456677888887774 78999999986532
Q ss_pred ---CeEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEE
Q 004954 489 ---EHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKI 564 (722)
Q Consensus 489 ---~~l~iVmEy~~-gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL 564 (722)
...++||||+. ++|.+++...........+++..+..++.||+.||+|||+++|+||||||+|||++. ++.++|
T Consensus 76 ~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~--~~~~kl 153 (272)
T cd05075 76 EGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNE--NMNVCV 153 (272)
T ss_pred cCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcC--CCCEEE
Confidence 35789999997 466666644332222344889999999999999999999999999999999999985 788999
Q ss_pred EecCCcccccCCc-----cccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCC
Q 004954 565 IDLGSSCFQTDNL-----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGP 638 (722)
Q Consensus 565 ~DFGls~~~~~~~-----~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~~i~~~lg~ 638 (722)
+|||++....... ....+++.|+|||.+.+..++.++|||||||++|+|++ |+.||.+.........+...-
T Consensus 154 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~-- 231 (272)
T cd05075 154 ADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGN-- 231 (272)
T ss_pred CCCCcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC--
Confidence 9999987654321 12245678999999999899999999999999999999 899998766555443332100
Q ss_pred CcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhC
Q 004954 639 IDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 715 (722)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~H 715 (722)
....+ ...+..+.++|.+||+.||.+|||+.+++++
T Consensus 232 --------------------------------~~~~~---------~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 267 (272)
T cd05075 232 --------------------------------RLKQP---------PDCLDGLYSLMSSCWLLNPKDRPSFETLRCE 267 (272)
T ss_pred --------------------------------CCCCC---------CCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 00000 1123568899999999999999999999864
No 277
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.2e-33 Score=297.72 Aligned_cols=251 Identities=21% Similarity=0.287 Sum_probs=196.2
Q ss_pred CcEEEEEEeccCCCCceEEEEE----CCCCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQD----LHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 487 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d----~~tg~~vAvKil~~~~--~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~ 487 (722)
..|++.+.||+|+||+||+|.+ ..+++.+|+|.++... .....+.+|+.+++.++ ||||+++++++..
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~------h~niv~~~~~~~~ 78 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELH------HPNIVCLLGVVTQ 78 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCC------CCCeeeEEEEEec
Confidence 5689999999999999999985 3456789999987432 22345677888888774 6899999999999
Q ss_pred cCeEEEEEEcccc-chHHHHhhhhcc-----------CCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEc
Q 004954 488 LEHLFIVCELLRA-NLYEFQKFNQES-----------GGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIK 555 (722)
Q Consensus 488 ~~~l~iVmEy~~g-sLl~~l~~~~~~-----------~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~ 555 (722)
....++||||+.+ +|.+++...... .....+++..+..++.||+.||+|||++||+||||||+|||++
T Consensus 79 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~ 158 (283)
T cd05090 79 EQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIG 158 (283)
T ss_pred CCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEc
Confidence 9999999999974 777776432210 0122378888999999999999999999999999999999999
Q ss_pred ccCCCeEEEEecCCcccccCC-----ccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHH
Q 004954 556 SYQRCEIKIIDLGSSCFQTDN-----LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMIL 629 (722)
Q Consensus 556 ~~~~~~vkL~DFGls~~~~~~-----~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l 629 (722)
. +..+||+|||++...... .....++..|+|||.+.+..++.++|||||||++|+|++ |..||.+.....+.
T Consensus 159 ~--~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~ 236 (283)
T cd05090 159 E--QLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVI 236 (283)
T ss_pred C--CCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHH
Confidence 6 778999999998654322 122344667999999998889999999999999999998 99999876655544
Q ss_pred HHHHhhcCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCH
Q 004954 630 ARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTA 709 (722)
Q Consensus 630 ~~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa 709 (722)
..+.... . .+ .....++.+.++|.+||+.||.+||++
T Consensus 237 ~~~~~~~-~-----------------------------------~~-------~~~~~~~~~~~li~~cl~~~p~~Rp~~ 273 (283)
T cd05090 237 EMVRKRQ-L-----------------------------------LP-------CSEDCPPRMYSLMTECWQEGPSRRPRF 273 (283)
T ss_pred HHHHcCC-c-----------------------------------CC-------CCCCCCHHHHHHHHHHcccCcccCcCH
Confidence 4432100 0 00 011234668899999999999999999
Q ss_pred HHHHhC
Q 004954 710 REALDH 715 (722)
Q Consensus 710 ~ElL~H 715 (722)
.+++++
T Consensus 274 ~~i~~~ 279 (283)
T cd05090 274 KDIHTR 279 (283)
T ss_pred HHHHHH
Confidence 999875
No 278
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=1.4e-33 Score=292.15 Aligned_cols=245 Identities=20% Similarity=0.344 Sum_probs=200.5
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEE
Q 004954 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF 492 (722)
Q Consensus 413 ~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~ 492 (722)
.+.|++.+.||.|+||.||++.+ .|+.+|+|.++.......++.+|+.+++.++ |+||+++++++......+
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~--~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~~ 76 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDY--RGQKVAVKCLKDDSTAAQAFLAEASVMTTLR------HPNLVQLLGVVLQGNPLY 76 (256)
T ss_pred hhhccceeeeecCCCceEEEEEe--cCcEEEEEEeccchhHHHHHHHHHHHHHhcC------CcceeeeEEEEcCCCCeE
Confidence 46789999999999999999986 4889999999876555567888888888775 679999999999999999
Q ss_pred EEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCcc
Q 004954 493 IVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 571 (722)
Q Consensus 493 iVmEy~~-gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~ 571 (722)
+||||++ ++|.+++..... ..+++..+..++.|++.||.|||+.|++|+||||+||+++. ++.++|+|||.+.
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~--~~~~~l~d~g~~~ 150 (256)
T cd05039 77 IVTEYMAKGSLVDYLRSRGR----AVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSE--DLVAKVSDFGLAK 150 (256)
T ss_pred EEEEecCCCcHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeC--CCCEEEccccccc
Confidence 9999998 578777664321 23899999999999999999999999999999999999985 7889999999988
Q ss_pred cccCCccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhh
Q 004954 572 FQTDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEI 650 (722)
Q Consensus 572 ~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~~~ 650 (722)
...........+..|+|||.+.+..++.++||||||+++|+|++ |..||...+..+....+....
T Consensus 151 ~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~-------------- 216 (256)
T cd05039 151 EASQGQDSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGY-------------- 216 (256)
T ss_pred ccccccccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCC--------------
Confidence 76544444445667999999988889999999999999999997 999998766555443332100
Q ss_pred hhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHh
Q 004954 651 YKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 714 (722)
Q Consensus 651 ~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~ 714 (722)
....| ...++.+.++|++||..+|++|||+.++++
T Consensus 217 --------------------~~~~~---------~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 251 (256)
T cd05039 217 --------------------RMEAP---------EGCPPEVYKVMKDCWELDPAKRPTFKQLRE 251 (256)
T ss_pred --------------------CCCCc---------cCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 00001 122467889999999999999999999986
No 279
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=1.1e-33 Score=303.87 Aligned_cols=251 Identities=25% Similarity=0.401 Sum_probs=201.0
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~----~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (722)
..|.+.+.||+|+||.||++++..+++.+|+|++.... .....+.+|+.+++.++ |+|++++++++....
T Consensus 25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~iv~~~~~~~~~~ 98 (317)
T cd06635 25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIK------HPNSIEYKGCYLREH 98 (317)
T ss_pred hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCC------CCCEEEEEEEEeeCC
Confidence 45788899999999999999999999999999986432 22345666777777664 679999999999999
Q ss_pred eEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCC
Q 004954 490 HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS 569 (722)
Q Consensus 490 ~l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGl 569 (722)
..++||||+.|++.+.+..... .+++..+..++.||+.||.|||+.||+|+||+|+||+++. ++.++|+|||+
T Consensus 99 ~~~lv~e~~~g~l~~~~~~~~~-----~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~--~~~~kl~dfg~ 171 (317)
T cd06635 99 TAWLVMEYCLGSASDLLEVHKK-----PLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTE--PGQVKLADFGS 171 (317)
T ss_pred eEEEEEeCCCCCHHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECC--CCCEEEecCCC
Confidence 9999999999988877654322 2889999999999999999999999999999999999985 78899999998
Q ss_pred cccccCCccccccCCcccCchhhc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhh
Q 004954 570 SCFQTDNLCLYVQSRSYRAPEVII---GLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQ 646 (722)
Q Consensus 570 s~~~~~~~~~~~gt~~y~APE~l~---~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~ 646 (722)
+..... .....+++.|+|||.+. ...++.++|||||||++|+|++|..||...........+.....+.
T Consensus 172 ~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~------- 243 (317)
T cd06635 172 ASIASP-ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPT------- 243 (317)
T ss_pred ccccCC-cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccCCC-------
Confidence 765443 23356888999999984 4567889999999999999999999997765444444432110000
Q ss_pred hhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCCC
Q 004954 647 GQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 720 (722)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~~ 720 (722)
.+ ....+..+.+||.+||+.+|.+||++.++++|||+..
T Consensus 244 ---------------------------~~--------~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~ 282 (317)
T cd06635 244 ---------------------------LQ--------SNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLR 282 (317)
T ss_pred ---------------------------CC--------CccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhc
Confidence 00 0112356889999999999999999999999999853
No 280
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.6e-35 Score=322.81 Aligned_cols=248 Identities=29% Similarity=0.419 Sum_probs=206.1
Q ss_pred ecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 004954 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (722)
Q Consensus 412 l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (722)
+.+.|.+...+|.|+|+.|-.+.+..+++..++|++.+.. .+..+|+.++.... +||||+++.+++.+..+.
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~---~~~~~e~~~~~~~~-----~h~niv~~~~v~~~~~~~ 391 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA---DDNQDEIPISLLVR-----DHPNIVKSHDVYEDGKEI 391 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheeccccc---cccccccchhhhhc-----CCCcceeecceecCCcee
Confidence 4577999999999999999999999999999999997763 34556777777765 478999999999999999
Q ss_pred EEEEEccccc-hHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCc
Q 004954 492 FIVCELLRAN-LYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (722)
Q Consensus 492 ~iVmEy~~gs-Ll~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 570 (722)
|+|||.+.|+ +++-+.... ....++..|+.+|+.|+.|||++|+|||||||+|||+. +..++++|+|||.+
T Consensus 392 ~~v~e~l~g~ell~ri~~~~-------~~~~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~-~~~g~lrltyFG~a 463 (612)
T KOG0603|consen 392 YLVMELLDGGELLRRIRSKP-------EFCSEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLD-GSAGHLRLTYFGFW 463 (612)
T ss_pred eeeehhccccHHHHHHHhcc-------hhHHHHHHHHHHHHHHHHHHHhcCeeecCCChhheeec-CCCCcEEEEEechh
Confidence 9999999875 444444322 22377888999999999999999999999999999995 34889999999999
Q ss_pred ccccCCccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHH-HHHHHHHhhcCCCcHHHHhhhhh
Q 004954 571 CFQTDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVV-MILARIIGMLGPIDLEMLMQGQE 649 (722)
Q Consensus 571 ~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~-e~l~~i~~~lg~~~~~~~~~~~~ 649 (722)
+.......+.+-|..|.|||++...+|+.++||||||++||+||+|+.||...... +++.+| +.++..
T Consensus 464 ~~~~~~~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i----~~~~~s------- 532 (612)
T KOG0603|consen 464 SELERSCDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRI----QMPKFS------- 532 (612)
T ss_pred hhCchhhcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhh----cCCccc-------
Confidence 98887766667899999999999999999999999999999999999999765444 333332 111100
Q ss_pred hhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCC-CCC
Q 004954 650 IYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL-QHP 721 (722)
Q Consensus 650 ~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf-~~~ 721 (722)
...+..+++||++||+.||.+|+++.+++.|||| +++
T Consensus 533 -----------------------------------~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~~~~~ 570 (612)
T KOG0603|consen 533 -----------------------------------ECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWFLSHP 570 (612)
T ss_pred -----------------------------------cccCHHHHHHHHHhccCChhhCcChhhhccCcchhcCC
Confidence 2334678999999999999999999999999999 554
No 281
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=100.00 E-value=5.3e-35 Score=299.90 Aligned_cols=288 Identities=32% Similarity=0.541 Sum_probs=234.8
Q ss_pred eecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 004954 411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 487 (722)
Q Consensus 411 ~l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~---~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~ 487 (722)
.+..||.-++.+|.|+- .|..+.|.-.+++||+|.+... .....+..+|+.+++.++ |+||++++.+|.-
T Consensus 14 tv~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~------~~nii~l~n~ftP 86 (369)
T KOG0665|consen 14 TVPKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVN------HKNIISLLNVFTP 86 (369)
T ss_pred eeeeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhc------ccceeeeeeccCc
Confidence 34578999999999998 8999999999999999986432 233467788999999887 5699999999985
Q ss_pred c------CeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCe
Q 004954 488 L------EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCE 561 (722)
Q Consensus 488 ~------~~l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~ 561 (722)
. ...|+|||+|..+|...+... +.-.++..|+.|++.|++|||+.||+||||||+||++.. ++.
T Consensus 87 ~~~l~~~~e~y~v~e~m~~nl~~vi~~e--------lDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~--~~~ 156 (369)
T KOG0665|consen 87 QKTLEEFQEVYLVMELMDANLCQVILME--------LDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNS--DCT 156 (369)
T ss_pred cccHHHHHhHHHHHHhhhhHHHHHHHHh--------cchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecc--hhh
Confidence 4 368999999999998887721 677889999999999999999999999999999999996 899
Q ss_pred EEEEecCCcccccCC--ccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCC
Q 004954 562 IKIIDLGSSCFQTDN--LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPI 639 (722)
Q Consensus 562 vkL~DFGls~~~~~~--~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~ 639 (722)
+||.|||++...... .+.++.|+.|+|||++.+..+...+||||+||++.||++|+..|++.+.-+...+++..+|.+
T Consensus 157 lKi~dfg~ar~e~~~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtp 236 (369)
T KOG0665|consen 157 LKILDFGLARTEDTDFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTP 236 (369)
T ss_pred eeeccchhhcccCcccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCC
Confidence 999999999765543 455788999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchh--hhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCC
Q 004954 640 DLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSL--EHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPW 717 (722)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l--~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPw 717 (722)
+.....+.+.....+....+.+... .....+|...-. ....+.....+++|+.+||..||++|.+++++|+|||
T Consensus 237 d~~F~~qL~~~~r~yv~~~~~y~~~----~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY 312 (369)
T KOG0665|consen 237 DPSFMKQLQPTVRNYVENRPQYQAI----SFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPY 312 (369)
T ss_pred CHHHHHHhhHHHHHHhhcChHhhcc----chhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCe
Confidence 9998888777665544433332221 111122211000 0111222356789999999999999999999999999
Q ss_pred CC
Q 004954 718 LQ 719 (722)
Q Consensus 718 f~ 719 (722)
++
T Consensus 313 ~~ 314 (369)
T KOG0665|consen 313 IK 314 (369)
T ss_pred ee
Confidence 96
No 282
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=7.9e-34 Score=303.13 Aligned_cols=252 Identities=21% Similarity=0.265 Sum_probs=195.7
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcE--EEEEEeecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVD--VCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~--vAvKil~~~--~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (722)
++|++.+.||+|+||.||+|.+..++.. +|+|.++.. ......+.+|+.++.++. .|+||+++++++...+
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~-----~h~~iv~~~~~~~~~~ 81 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLG-----HHPNIINLLGACEHRG 81 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhc-----CCCCcceEEEEECCCC
Confidence 5799999999999999999998877764 477766532 233456677888888874 3789999999999999
Q ss_pred eEEEEEEccc-cchHHHHhhhhcc----------CCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccC
Q 004954 490 HLFIVCELLR-ANLYEFQKFNQES----------GGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQ 558 (722)
Q Consensus 490 ~l~iVmEy~~-gsLl~~l~~~~~~----------~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~ 558 (722)
..++||||+. ++|.+++...... .....+++..++.++.||+.||+|||++||+||||||+|||++.
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~-- 159 (303)
T cd05088 82 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGE-- 159 (303)
T ss_pred CceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecC--
Confidence 9999999997 5777777644321 11234889999999999999999999999999999999999985
Q ss_pred CCeEEEEecCCcccccCCccc--cccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhh
Q 004954 559 RCEIKIIDLGSSCFQTDNLCL--YVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGM 635 (722)
Q Consensus 559 ~~~vkL~DFGls~~~~~~~~~--~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~~i~~~ 635 (722)
++.+||+|||++......... ...+..|+|||.+.+..++.++|||||||++|+|+| |..||...+..+....+...
T Consensus 160 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~ 239 (303)
T cd05088 160 NYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG 239 (303)
T ss_pred CCcEEeCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHhcC
Confidence 778999999998643222111 223567999999988889999999999999999998 99999776554443332100
Q ss_pred cCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhC
Q 004954 636 LGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 715 (722)
Q Consensus 636 lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~H 715 (722)
.....+ ...++.+.+||.+||+.+|++||++.++|++
T Consensus 240 ----------------------------------~~~~~~---------~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 276 (303)
T cd05088 240 ----------------------------------YRLEKP---------LNCDDEVYDLMRQCWREKPYERPSFAQILVS 276 (303)
T ss_pred ----------------------------------CcCCCC---------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 000000 1124568899999999999999999999975
No 283
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=4.6e-34 Score=296.38 Aligned_cols=246 Identities=23% Similarity=0.349 Sum_probs=199.5
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchh-hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 004954 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD-FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (722)
Q Consensus 413 ~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~-~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (722)
..+|++.++||.|+||.||+|.+.. ++.+|+|++..... ....+.+|+.+++.++ |+||+++++++......
T Consensus 5 ~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~ 77 (261)
T cd05148 5 REEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDLLKQQDFQKEVQALKRLR------HKHLISLFAVCSVGEPV 77 (261)
T ss_pred HHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccchhhHHHHHHHHHHHhcCC------CcchhheeeeEecCCCe
Confidence 4568999999999999999999877 89999999876543 3456777888877774 68999999999999999
Q ss_pred EEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCc
Q 004954 492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (722)
Q Consensus 492 ~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 570 (722)
++||||+.+ +|.+++.... ...+++..++.++.||+.||.|||+.||+|+||+|+||+++. ++.+||+|||.+
T Consensus 78 ~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~--~~~~kl~d~g~~ 151 (261)
T cd05148 78 YIITELMEKGSLLAFLRSPE----GQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGE--DLVCKVADFGLA 151 (261)
T ss_pred EEEEeecccCCHHHHHhcCC----CCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcC--CceEEEccccch
Confidence 999999975 7777776432 123889999999999999999999999999999999999985 788999999998
Q ss_pred ccccCCcc---ccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHHHHhh
Q 004954 571 CFQTDNLC---LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLMQ 646 (722)
Q Consensus 571 ~~~~~~~~---~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~ 646 (722)
........ ...++..|+|||.+.+..++.++||||||+++|+|++ |+.||...+..+.+..+.....
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~--------- 222 (261)
T cd05148 152 RLIKEDVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGYR--------- 222 (261)
T ss_pred hhcCCccccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCCc---------
Confidence 76543321 2234567999999998899999999999999999998 8999988776555554431100
Q ss_pred hhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHh
Q 004954 647 GQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 714 (722)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~ 714 (722)
...+ ...++.+.++|.+||+.||.+|||+.++++
T Consensus 223 -------------------------~~~~---------~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~ 256 (261)
T cd05148 223 -------------------------MPCP---------AKCPQEIYKIMLECWAAEPEDRPSFKALRE 256 (261)
T ss_pred -------------------------CCCC---------CCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 0000 122466889999999999999999999985
No 284
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=7.1e-34 Score=305.08 Aligned_cols=246 Identities=21% Similarity=0.276 Sum_probs=191.7
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcE----EEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEE
Q 004954 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVD----VCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY 486 (722)
Q Consensus 413 ~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~----vAvKil~~~~--~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~ 486 (722)
..+|++.+.||+|+||.||+|++..+++. ||+|+++... .....+.+|+.+++.+. ||||+++++++.
T Consensus 6 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~------h~niv~~~g~~~ 79 (316)
T cd05108 6 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD------NPHVCRLLGICL 79 (316)
T ss_pred hhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCC------CCCCCeEEEEEc
Confidence 46799999999999999999998666654 8999986432 33456667777777664 789999999987
Q ss_pred ecCeEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEE
Q 004954 487 HLEHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKII 565 (722)
Q Consensus 487 ~~~~l~iVmEy~~-gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~ 565 (722)
.. ..++|+||+. |+|.+++..... .++...++.++.||+.||+|||+.||+||||||+|||++. ++.+||+
T Consensus 80 ~~-~~~~v~e~~~~g~l~~~l~~~~~-----~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~--~~~~kl~ 151 (316)
T cd05108 80 TS-TVQLITQLMPFGCLLDYVREHKD-----NIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKT--PQHVKIT 151 (316)
T ss_pred CC-CceeeeecCCCCCHHHHHHhccc-----cCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecC--CCcEEEc
Confidence 64 5678999987 577777764332 2788899999999999999999999999999999999985 7789999
Q ss_pred ecCCcccccCCcc-----ccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCC
Q 004954 566 DLGSSCFQTDNLC-----LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPI 639 (722)
Q Consensus 566 DFGls~~~~~~~~-----~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~~i~~~lg~~ 639 (722)
|||++........ ....+..|+|||.+.+..++.++|||||||++|+|++ |..||.+....++...+...
T Consensus 152 DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~~~~~---- 227 (316)
T cd05108 152 DFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG---- 227 (316)
T ss_pred cccccccccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhCC----
Confidence 9999976543221 1223567999999999999999999999999999998 99999876554433221100
Q ss_pred cHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhC
Q 004954 640 DLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 715 (722)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~H 715 (722)
...|. ....+..+.++|.+||..+|.+|||+.+++.+
T Consensus 228 --------------------------------~~~~~-------~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~ 264 (316)
T cd05108 228 --------------------------------ERLPQ-------PPICTIDVYMIMVKCWMIDADSRPKFRELIIE 264 (316)
T ss_pred --------------------------------CCCCC-------CCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 00000 01123568899999999999999999999976
No 285
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=8.5e-34 Score=293.17 Aligned_cols=239 Identities=23% Similarity=0.357 Sum_probs=188.2
Q ss_pred EEeccCCCCceEEEEECCCCcEEEEEEeecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEEEc
Q 004954 420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCEL 497 (722)
Q Consensus 420 ~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~--~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~iVmEy 497 (722)
+.||+|+||.||+|++..+++.+|+|.+... ......+.+|+++++.+. ||||+++++++......++||||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~~~lv~e~ 74 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYS------HPNIVRLIGVCTQKQPIYIVMEL 74 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCC------CCCcceEEEEEcCCCCeEEEEee
Confidence 3699999999999999999999999987643 333456778888888764 78999999999999999999999
Q ss_pred ccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCcccccCC
Q 004954 498 LRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDN 576 (722)
Q Consensus 498 ~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~~~ 576 (722)
+.+ +|.+++.... ..+++..++.++.|++.||+|||+.||+|+||||+||+++. ++.+||+|||++......
T Consensus 75 ~~~~~L~~~~~~~~-----~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~--~~~~kl~dfg~~~~~~~~ 147 (252)
T cd05084 75 VQGGDFLTFLRTEG-----PRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTE--KNVLKISDFGMSREEEDG 147 (252)
T ss_pred ccCCcHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcC--CCcEEECccccCcccccc
Confidence 975 6666654322 23789999999999999999999999999999999999985 778999999998654332
Q ss_pred ccc-----cccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhh
Q 004954 577 LCL-----YVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEI 650 (722)
Q Consensus 577 ~~~-----~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~~~ 650 (722)
... ...+..|+|||.+.+..++.++|||||||++|+|++ |..||...........+....
T Consensus 148 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~-------------- 213 (252)
T cd05084 148 VYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGV-------------- 213 (252)
T ss_pred cccccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCC--------------
Confidence 111 122456999999998889999999999999999998 999997654443332221100
Q ss_pred hhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHh
Q 004954 651 YKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 714 (722)
Q Consensus 651 ~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~ 714 (722)
....+ ...+..+.+||.+||+.+|++|||+.++++
T Consensus 214 --------------------~~~~~---------~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 248 (252)
T cd05084 214 --------------------RLPCP---------ELCPDAVYRLMERCWEYDPGQRPSFSTVHQ 248 (252)
T ss_pred --------------------CCCCc---------ccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 00011 112456889999999999999999999985
No 286
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=1.4e-33 Score=293.34 Aligned_cols=246 Identities=24% Similarity=0.351 Sum_probs=195.7
Q ss_pred ecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 004954 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (722)
Q Consensus 412 l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (722)
..++|++.+.||+|++|.||++.+..+ ..+|+|++.........+.+|+.+++.+. |+|++++++++. .+..
T Consensus 4 ~~~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~~~~~~~~~E~~~l~~l~------h~~i~~~~~~~~-~~~~ 75 (260)
T cd05069 4 PRESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGTMMPEAFLQEAQIMKKLR------HDKLVPLYAVVS-EEPI 75 (260)
T ss_pred ChHHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCCccHHHHHHHHHHHHhCC------CCCeeeEEEEEc-CCCc
Confidence 357899999999999999999987654 46999998765555566778888888775 679999998875 4668
Q ss_pred EEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCc
Q 004954 492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (722)
Q Consensus 492 ~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 570 (722)
++||||+.+ +|.+++.... ...+++..+..++.|++.||.|||+.|++|+||||+||+++. ++.++|+|||.+
T Consensus 76 ~~v~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~--~~~~~l~dfg~~ 149 (260)
T cd05069 76 YIVTEFMGKGSLLDFLKEGD----GKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGD--NLVCKIADFGLA 149 (260)
T ss_pred EEEEEcCCCCCHHHHHhhCC----CCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcC--CCeEEECCCccc
Confidence 999999985 7877776432 123788999999999999999999999999999999999986 788999999998
Q ss_pred ccccCCcc----ccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHHHHh
Q 004954 571 CFQTDNLC----LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLM 645 (722)
Q Consensus 571 ~~~~~~~~----~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~~i~~~lg~~~~~~~~ 645 (722)
........ ...++..|+|||.+.+..++.++||||||+++|+|++ |..||.+....+....+.....
T Consensus 150 ~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~-------- 221 (260)
T cd05069 150 RLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGYR-------- 221 (260)
T ss_pred eEccCCcccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC--------
Confidence 76543221 1234667999999998889999999999999999999 9999987765554444321100
Q ss_pred hhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHh
Q 004954 646 QGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 714 (722)
Q Consensus 646 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~ 714 (722)
...+ ...+..+.+||++||..||.+||+++++++
T Consensus 222 --------------------------~~~~---------~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 255 (260)
T cd05069 222 --------------------------MPCP---------QGCPESLHELMKLCWKKDPDERPTFEYIQS 255 (260)
T ss_pred --------------------------CCCC---------cccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 0001 112466899999999999999999999975
No 287
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.5e-33 Score=301.22 Aligned_cols=256 Identities=22% Similarity=0.335 Sum_probs=199.5
Q ss_pred ceecCcEEEEEEeccCCCCceEEEEECC-------CCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeE
Q 004954 410 TVIAGRYYVTEYLGSAAFSKVFQAQDLH-------TGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILR 480 (722)
Q Consensus 410 ~~l~~rY~i~~~LG~G~fG~Vy~a~d~~-------tg~~vAvKil~~~~--~~~~~~~~E~~il~~L~~~~~~~hpnIv~ 480 (722)
++..++|.+.+.||+|+||.||++++.. +...+|+|+++... .....+.+|+.+++.+. .|+||++
T Consensus 14 ~~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~-----~h~~i~~ 88 (307)
T cd05098 14 EVPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG-----KHKNIIN 88 (307)
T ss_pred eeehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhc-----CCCCEee
Confidence 3445789999999999999999998643 23579999987542 23456777888888774 3789999
Q ss_pred EEEEEEecCeEEEEEEccc-cchHHHHhhhhcc----------CCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCC
Q 004954 481 LYDYFYHLEHLFIVCELLR-ANLYEFQKFNQES----------GGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKP 549 (722)
Q Consensus 481 l~~~f~~~~~l~iVmEy~~-gsLl~~l~~~~~~----------~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp 549 (722)
+++++...+..++||||+. ++|.+++...... .....+++.+++.++.||+.||+|||+.|++||||||
T Consensus 89 ~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp 168 (307)
T cd05098 89 LLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAA 168 (307)
T ss_pred EEEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccH
Confidence 9999999999999999997 4788787654321 1223488899999999999999999999999999999
Q ss_pred CceEEcccCCCeEEEEecCCcccccCCc-----cccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCC
Q 004954 550 ENILIKSYQRCEIKIIDLGSSCFQTDNL-----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPND 623 (722)
Q Consensus 550 ~NILl~~~~~~~vkL~DFGls~~~~~~~-----~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~ 623 (722)
+||+++. ++.++|+|||.+....... ....+++.|+|||++.+..++.++|||||||++|+|++ |..||...
T Consensus 169 ~Nill~~--~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~ 246 (307)
T cd05098 169 RNVLVTE--DNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 246 (307)
T ss_pred HheEEcC--CCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcC
Confidence 9999985 7889999999986543211 11223468999999999889999999999999999998 89999876
Q ss_pred hHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCC
Q 004954 624 AVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINP 703 (722)
Q Consensus 624 ~~~e~l~~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP 703 (722)
+..+....+.... ....| ...+..+.+||.+||..+|
T Consensus 247 ~~~~~~~~~~~~~----------------------------------~~~~~---------~~~~~~~~~li~~~l~~~p 283 (307)
T cd05098 247 PVEELFKLLKEGH----------------------------------RMDKP---------SNCTNELYMMMRDCWHAVP 283 (307)
T ss_pred CHHHHHHHHHcCC----------------------------------CCCCC---------CcCCHHHHHHHHHHcccCh
Confidence 6555444332100 00011 1124568899999999999
Q ss_pred CCCcCHHHHHhC
Q 004954 704 QRRPTAREALDH 715 (722)
Q Consensus 704 ~kRpTa~ElL~H 715 (722)
.+|||+.+++++
T Consensus 284 ~~Rps~~evl~~ 295 (307)
T cd05098 284 SQRPTFKQLVED 295 (307)
T ss_pred hhCcCHHHHHHH
Confidence 999999999875
No 288
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-35 Score=317.33 Aligned_cols=234 Identities=29% Similarity=0.406 Sum_probs=192.5
Q ss_pred EEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEEEcc
Q 004954 419 TEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELL 498 (722)
Q Consensus 419 ~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~iVmEy~ 498 (722)
++-||+|+.|.||+|+ ..++.||||.++..+ ..+++-|++| +||||+.+.++|.....+|||||||
T Consensus 129 LeWlGSGaQGAVF~Gr--l~netVAVKKV~elk------ETdIKHLRkL------kH~NII~FkGVCtqsPcyCIiMEfC 194 (904)
T KOG4721|consen 129 LEWLGSGAQGAVFLGR--LHNETVAVKKVRELK------ETDIKHLRKL------KHPNIITFKGVCTQSPCYCIIMEFC 194 (904)
T ss_pred hhhhccCcccceeeee--ccCceehhHHHhhhh------hhhHHHHHhc------cCcceeeEeeeecCCceeEEeeecc
Confidence 4559999999999998 467899999875432 2345555555 4789999999999999999999999
Q ss_pred c-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCcccccCCc
Q 004954 499 R-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNL 577 (722)
Q Consensus 499 ~-gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~~~~ 577 (722)
. |-|+++++..+. ++...+..|..+|+.||.|||..+|||||||.-||||+. +..|||+|||-++...+..
T Consensus 195 a~GqL~~VLka~~~------itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~--~d~VKIsDFGTS~e~~~~S 266 (904)
T KOG4721|consen 195 AQGQLYEVLKAGRP------ITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISY--DDVVKISDFGTSKELSDKS 266 (904)
T ss_pred ccccHHHHHhccCc------cCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeec--cceEEeccccchHhhhhhh
Confidence 7 678888875543 888999999999999999999999999999999999996 7789999999998777664
Q ss_pred cc--cccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhc
Q 004954 578 CL--YVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYFT 655 (722)
Q Consensus 578 ~~--~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~~~~~~~~ 655 (722)
+. ++||..|||||++...+.+.|+|||||||+|||||||..||.+.+...++.-
T Consensus 267 TkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwG------------------------ 322 (904)
T KOG4721|consen 267 TKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWG------------------------ 322 (904)
T ss_pred hhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEe------------------------
Confidence 43 7899999999999999999999999999999999999999987654332211
Q ss_pred ccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCC
Q 004954 656 KEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHP 716 (722)
Q Consensus 656 ~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HP 716 (722)
.....+....|. ..+.-|+=||+.||+.-|..||+..++|.|-
T Consensus 323 ---------VGsNsL~LpvPs---------tcP~GfklL~Kqcw~sKpRNRPSFrqil~Hl 365 (904)
T KOG4721|consen 323 ---------VGSNSLHLPVPS---------TCPDGFKLLLKQCWNSKPRNRPSFRQILLHL 365 (904)
T ss_pred ---------ccCCcccccCcc---------cCchHHHHHHHHHHhcCCCCCccHHHHHHHH
Confidence 111222223332 2345688999999999999999999999993
No 289
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=8.4e-34 Score=301.67 Aligned_cols=248 Identities=24% Similarity=0.378 Sum_probs=196.9
Q ss_pred EEEeccCCCCceEEEEECCCCcEEEEEEeecch-hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEEEc
Q 004954 419 TEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCEL 497 (722)
Q Consensus 419 ~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~-~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~iVmEy 497 (722)
..+||+|+||.||++.+..+++.+|||.+.... .....+.+|+.+++.++ |+||+++++.+...++.++||||
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~------h~~iv~~~~~~~~~~~~~lv~e~ 98 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ------HENVVEMYNSYLVGDELWVVMEF 98 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcC------CcchhheeeEEEeCCEEEEEEec
Confidence 457999999999999999999999999886432 23345677888777764 67999999999999999999999
Q ss_pred cccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCcccccCC-
Q 004954 498 LRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDN- 576 (722)
Q Consensus 498 ~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~~~- 576 (722)
+.++.+..+.... .+++..+..++.|++.||+|||+.|++|+||+|+||+++. ++.++|+|||++......
T Consensus 99 ~~~~~L~~~~~~~------~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~--~~~~~l~dfg~~~~~~~~~ 170 (292)
T cd06657 99 LEGGALTDIVTHT------RMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTH--DGRVKLSDFGFCAQVSKEV 170 (292)
T ss_pred CCCCcHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECC--CCCEEEcccccceeccccc
Confidence 9875443333221 2788999999999999999999999999999999999986 678999999987654332
Q ss_pred --ccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhh
Q 004954 577 --LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYF 654 (722)
Q Consensus 577 --~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~~~~~~~ 654 (722)
.....+++.|+|||.+.+..++.++|+||+|+++|+|++|..||.+....+....+.....
T Consensus 171 ~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~----------------- 233 (292)
T cd06657 171 PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP----------------- 233 (292)
T ss_pred ccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCC-----------------
Confidence 2234678899999999888899999999999999999999999987655444433221100
Q ss_pred cccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCCCC
Q 004954 655 TKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQHP 721 (722)
Q Consensus 655 ~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~~~ 721 (722)
..++ .....+..+.++|.+||+.+|.+||++.++|+||||.+.
T Consensus 234 -----------------~~~~-------~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~~~~~~~ 276 (292)
T cd06657 234 -----------------PKLK-------NLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKA 276 (292)
T ss_pred -----------------cccC-------CcccCCHHHHHHHHHHHhCCcccCcCHHHHhcChHHhcc
Confidence 0000 011234568899999999999999999999999999765
No 290
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=6.8e-34 Score=304.33 Aligned_cols=251 Identities=24% Similarity=0.377 Sum_probs=200.3
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc----hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~----~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (722)
.+|.+.+.||+|+||.||+|+++.+++.+|+|.+... .....++.+|+++++.++ |+|++++++++....
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~ 88 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR------HPNTIQYRGCYLREH 88 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCC------CCCcccEEEEEEcCC
Confidence 4578888999999999999999999999999988642 222345667888887775 679999999999999
Q ss_pred eEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCC
Q 004954 490 HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS 569 (722)
Q Consensus 490 ~l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGl 569 (722)
..++||||+.+++.+.+.... ..+++..+..++.|++.||.|||+.+++||||+|+||+++. ++.++|+|||+
T Consensus 89 ~~~lv~e~~~~~l~~~~~~~~-----~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~--~~~~kl~dfg~ 161 (308)
T cd06634 89 TAWLVMEYCLGSASDLLEVHK-----KPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSE--PGLVKLGDFGS 161 (308)
T ss_pred eeEEEEEccCCCHHHHHHHcC-----CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECC--CCcEEECCccc
Confidence 999999999988877765332 22788999999999999999999999999999999999985 78899999999
Q ss_pred cccccCCccccccCCcccCchhhc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhh
Q 004954 570 SCFQTDNLCLYVQSRSYRAPEVII---GLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQ 646 (722)
Q Consensus 570 s~~~~~~~~~~~gt~~y~APE~l~---~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~ 646 (722)
+...... ....+++.|+|||.+. ...++.++|||||||++|+|++|..||......+....+....
T Consensus 162 ~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~---------- 230 (308)
T cd06634 162 ASIMAPA-NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNE---------- 230 (308)
T ss_pred ceeecCc-ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcC----------
Confidence 8765432 3356788999999985 3457889999999999999999999997654433333222100
Q ss_pred hhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCCC
Q 004954 647 GQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 720 (722)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~~ 720 (722)
.|.. .....+..+.+||++||+.+|.+||++.++++|||+..
T Consensus 231 ---------------------------~~~~-----~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~ 272 (308)
T cd06634 231 ---------------------------SPAL-----QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLR 272 (308)
T ss_pred ---------------------------CCCc-----CcccccHHHHHHHHHHhhCCcccCCCHHHHhhCccccc
Confidence 0000 00123456889999999999999999999999999854
No 291
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.1e-34 Score=330.24 Aligned_cols=250 Identities=23% Similarity=0.298 Sum_probs=209.5
Q ss_pred cCcEEEEEEeccCCCCceEEEEEC-----CCCcEEEEEEeecchh--hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEE
Q 004954 413 AGRYYVTEYLGSAAFSKVFQAQDL-----HTGVDVCLKIIKNDKD--FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYF 485 (722)
Q Consensus 413 ~~rY~i~~~LG~G~fG~Vy~a~d~-----~tg~~vAvKil~~~~~--~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f 485 (722)
..+.+..+.||+|+||+||+|+-. ...+.||||.++...+ ...++.+|++++..++ |||||+++|++
T Consensus 485 r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~------H~nIVrLlGVC 558 (774)
T KOG1026|consen 485 RSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQ------HPNIVRLLGVC 558 (774)
T ss_pred hhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhcc------CCCeEEEEEEE
Confidence 345677888999999999999852 2346799999986543 4678999999999986 68999999999
Q ss_pred EecCeEEEEEEccc-cchHHHHhhhhccCC--------CcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcc
Q 004954 486 YHLEHLFIVCELLR-ANLYEFQKFNQESGG--------EAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKS 556 (722)
Q Consensus 486 ~~~~~l~iVmEy~~-gsLl~~l~~~~~~~~--------~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~ 556 (722)
..++.+++|+|||. |+|.++++....... ...++..+.+.|+.||+.||.||-++.+|||||..+|+||..
T Consensus 559 ~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge 638 (774)
T KOG1026|consen 559 REGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGE 638 (774)
T ss_pred ccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceecc
Confidence 99999999999997 789999886654321 223888999999999999999999999999999999999996
Q ss_pred cCCCeEEEEecCCcccccCCcccc-----ccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHH
Q 004954 557 YQRCEIKIIDLGSSCFQTDNLCLY-----VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILA 630 (722)
Q Consensus 557 ~~~~~vkL~DFGls~~~~~~~~~~-----~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~ 630 (722)
+..|||+|||+++..-...... .-+.+|||||.|...+++.++||||+||+|||+++ |+.||.+.+.+++++
T Consensus 639 --~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe 716 (774)
T KOG1026|consen 639 --NLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIE 716 (774)
T ss_pred --ceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHHH
Confidence 8899999999997644433322 23678999999999999999999999999999999 999999999999887
Q ss_pred HHHhhcCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHH
Q 004954 631 RIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAR 710 (722)
Q Consensus 631 ~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ 710 (722)
.|.+. .+...+...+.++.+||..||+.+|++||+.+
T Consensus 717 ~i~~g-------------------------------------------~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~ 753 (774)
T KOG1026|consen 717 CIRAG-------------------------------------------QLLSCPENCPTEVYSLMLECWNENPKRRPSFK 753 (774)
T ss_pred HHHcC-------------------------------------------CcccCCCCCCHHHHHHHHHHhhcCcccCCCHH
Confidence 77521 11223345667899999999999999999999
Q ss_pred HHH
Q 004954 711 EAL 713 (722)
Q Consensus 711 ElL 713 (722)
||-
T Consensus 754 eI~ 756 (774)
T KOG1026|consen 754 EIH 756 (774)
T ss_pred HHH
Confidence 873
No 292
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=1.6e-33 Score=297.93 Aligned_cols=251 Identities=23% Similarity=0.284 Sum_probs=197.5
Q ss_pred cCcEEEEEEeccCCCCceEEEEE-----CCCCcEEEEEEeecch-hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEE
Q 004954 413 AGRYYVTEYLGSAAFSKVFQAQD-----LHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY 486 (722)
Q Consensus 413 ~~rY~i~~~LG~G~fG~Vy~a~d-----~~tg~~vAvKil~~~~-~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~ 486 (722)
..+|.+.+.||+|+||+||++.+ ..++..+|+|.+.... .....+.+|+.+++.++ ||||+++++++.
T Consensus 4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~ 77 (288)
T cd05093 4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQ------HEHIVKFYGVCV 77 (288)
T ss_pred hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCC------CCCcceEEEEEe
Confidence 35799999999999999999985 3355679999886533 33456778888888775 679999999999
Q ss_pred ecCeEEEEEEccc-cchHHHHhhhhc-------cCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccC
Q 004954 487 HLEHLFIVCELLR-ANLYEFQKFNQE-------SGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQ 558 (722)
Q Consensus 487 ~~~~l~iVmEy~~-gsLl~~l~~~~~-------~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~ 558 (722)
..+..++||||+. ++|.+++..... ......+++..++.++.||+.||+|||+.|++||||||+||+++.
T Consensus 78 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~-- 155 (288)
T cd05093 78 EGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGE-- 155 (288)
T ss_pred cCCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEcc--
Confidence 9999999999997 467777653321 011224899999999999999999999999999999999999985
Q ss_pred CCeEEEEecCCcccccCCc-----cccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHH
Q 004954 559 RCEIKIIDLGSSCFQTDNL-----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARI 632 (722)
Q Consensus 559 ~~~vkL~DFGls~~~~~~~-----~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~~i 632 (722)
++.++|+|||++....... ....+++.|+|||++.+..++.++|||||||++|+|++ |.+||......+.+..+
T Consensus 156 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i 235 (288)
T cd05093 156 NLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECI 235 (288)
T ss_pred CCcEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence 7889999999987543221 12234678999999999889999999999999999998 99999877665555444
Q ss_pred HhhcCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHH
Q 004954 633 IGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREA 712 (722)
Q Consensus 633 ~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~El 712 (722)
..... ...+ ...+..+.+||.+||+.||.+|||+.++
T Consensus 236 ~~~~~----------------------------------~~~~---------~~~~~~l~~li~~~l~~~p~~Rpt~~~v 272 (288)
T cd05093 236 TQGRV----------------------------------LQRP---------RTCPKEVYDLMLGCWQREPHMRLNIKEI 272 (288)
T ss_pred HcCCc----------------------------------CCCC---------CCCCHHHHHHHHHHccCChhhCCCHHHH
Confidence 31100 0000 1124568999999999999999999998
Q ss_pred Hh
Q 004954 713 LD 714 (722)
Q Consensus 713 L~ 714 (722)
+.
T Consensus 273 ~~ 274 (288)
T cd05093 273 HS 274 (288)
T ss_pred HH
Confidence 64
No 293
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=1.7e-33 Score=297.66 Aligned_cols=255 Identities=23% Similarity=0.349 Sum_probs=199.2
Q ss_pred eecCcEEEEEEeccCCCCceEEEEECCC-----CcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEE
Q 004954 411 VIAGRYYVTEYLGSAAFSKVFQAQDLHT-----GVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYD 483 (722)
Q Consensus 411 ~l~~rY~i~~~LG~G~fG~Vy~a~d~~t-----g~~vAvKil~~~~--~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~ 483 (722)
+-.++|++.+.||+|+||.||++.+... ...+|+|++.... .....+.+|+.+++.+. .|+||+++++
T Consensus 9 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~-----~h~~i~~~~~ 83 (293)
T cd05053 9 LPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIG-----KHKNIINLLG 83 (293)
T ss_pred cCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhc-----CCCCeeeEEE
Confidence 3357899999999999999999987643 3789999987542 23345677888888773 3789999999
Q ss_pred EEEecCeEEEEEEccc-cchHHHHhhhhc----------cCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCce
Q 004954 484 YFYHLEHLFIVCELLR-ANLYEFQKFNQE----------SGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENI 552 (722)
Q Consensus 484 ~f~~~~~l~iVmEy~~-gsLl~~l~~~~~----------~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NI 552 (722)
++.....+++||||+. ++|..++..... ......+++..+..++.||+.||.|||+.+|+||||||+||
T Consensus 84 ~~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Ni 163 (293)
T cd05053 84 VCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNV 163 (293)
T ss_pred EEcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeE
Confidence 9999999999999997 467777653221 02233488999999999999999999999999999999999
Q ss_pred EEcccCCCeEEEEecCCcccccCCc-----cccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHH
Q 004954 553 LIKSYQRCEIKIIDLGSSCFQTDNL-----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVV 626 (722)
Q Consensus 553 Ll~~~~~~~vkL~DFGls~~~~~~~-----~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~ 626 (722)
+++. ++.+||+|||++....... ....++..|+|||++.+..++.++|||||||++|+|++ |..||.+....
T Consensus 164 l~~~--~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~ 241 (293)
T cd05053 164 LVTE--DHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVE 241 (293)
T ss_pred EEcC--CCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHH
Confidence 9985 7899999999987644321 11234567999999998899999999999999999998 99999877655
Q ss_pred HHHHHHHhhcCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCC
Q 004954 627 MILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRR 706 (722)
Q Consensus 627 e~l~~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kR 706 (722)
+....+.... ....| ...+..+.+||.+||+.||.+|
T Consensus 242 ~~~~~~~~~~----------------------------------~~~~~---------~~~~~~~~~li~~~l~~~p~~R 278 (293)
T cd05053 242 ELFKLLKEGY----------------------------------RMEKP---------QNCTQELYHLMRDCWHEVPSQR 278 (293)
T ss_pred HHHHHHHcCC----------------------------------cCCCC---------CCCCHHHHHHHHHHcccCcccC
Confidence 5443332100 00011 1224568899999999999999
Q ss_pred cCHHHHHhC
Q 004954 707 PTAREALDH 715 (722)
Q Consensus 707 pTa~ElL~H 715 (722)
||+.|+|++
T Consensus 279 ps~~eil~~ 287 (293)
T cd05053 279 PTFKQLVED 287 (293)
T ss_pred cCHHHHHHH
Confidence 999999975
No 294
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=1.7e-33 Score=294.72 Aligned_cols=254 Identities=22% Similarity=0.311 Sum_probs=197.9
Q ss_pred eecCcEEEEEEeccCCCCceEEEEECCC-----CcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEE
Q 004954 411 VIAGRYYVTEYLGSAAFSKVFQAQDLHT-----GVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYD 483 (722)
Q Consensus 411 ~l~~rY~i~~~LG~G~fG~Vy~a~d~~t-----g~~vAvKil~~~~--~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~ 483 (722)
+..++|++.+.||+|+||.||++.+... +..+|+|.+.... .....+.+|+.+++.+. |+||+++++
T Consensus 3 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~------~~~i~~~~~ 76 (277)
T cd05032 3 LPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFN------CHHVVRLLG 76 (277)
T ss_pred cchHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCC------CCceeEEEE
Confidence 3457899999999999999999987643 4889999986543 22334566777776654 789999999
Q ss_pred EEEecCeEEEEEEccc-cchHHHHhhhhccC----CCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccC
Q 004954 484 YFYHLEHLFIVCELLR-ANLYEFQKFNQESG----GEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQ 558 (722)
Q Consensus 484 ~f~~~~~l~iVmEy~~-gsLl~~l~~~~~~~----~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~ 558 (722)
++......++||||+. ++|.+++....... ....+++..+..++.||+.||.|||+.+++||||||+||+++.
T Consensus 77 ~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~-- 154 (277)
T cd05032 77 VVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAE-- 154 (277)
T ss_pred EEcCCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcC--
Confidence 9999999999999997 57777765432211 1234788899999999999999999999999999999999996
Q ss_pred CCeEEEEecCCcccccCC-----ccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHH
Q 004954 559 RCEIKIIDLGSSCFQTDN-----LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARI 632 (722)
Q Consensus 559 ~~~vkL~DFGls~~~~~~-----~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~~i 632 (722)
++.+||+|||++...... .....++..|+|||.+.+..++.++|||||||++|+|++ |..||...+..+....+
T Consensus 155 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~ 234 (277)
T cd05032 155 DLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFV 234 (277)
T ss_pred CCCEEECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHH
Confidence 788999999998654322 122345778999999998889999999999999999998 99999877665554433
Q ss_pred HhhcCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHH
Q 004954 633 IGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREA 712 (722)
Q Consensus 633 ~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~El 712 (722)
... . ....|. ..+..+.+||.+||+.+|++|||+.++
T Consensus 235 ~~~-~---------------------------------~~~~~~---------~~~~~~~~li~~~l~~~p~~Rpt~~~l 271 (277)
T cd05032 235 IDG-G---------------------------------HLDLPE---------NCPDKLLELMRMCWQYNPKMRPTFLEI 271 (277)
T ss_pred hcC-C---------------------------------CCCCCC---------CCCHHHHHHHHHHcCCChhhCCCHHHH
Confidence 200 0 001111 124668899999999999999999999
Q ss_pred HhC
Q 004954 713 LDH 715 (722)
Q Consensus 713 L~H 715 (722)
++.
T Consensus 272 ~~~ 274 (277)
T cd05032 272 VSS 274 (277)
T ss_pred HHH
Confidence 863
No 295
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=1.7e-33 Score=299.47 Aligned_cols=264 Identities=20% Similarity=0.231 Sum_probs=188.5
Q ss_pred eeCceecCcEEEEEEeccCCCCceEEEEECCC---CcEEEEEEeecchhhh-Hh-----HHHHHHHHHHhcccCCCCCCc
Q 004954 407 ILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHT---GVDVCLKIIKNDKDFF-DQ-----SLDEIKLLKLVNKNDPADEHH 477 (722)
Q Consensus 407 ~~~~~l~~rY~i~~~LG~G~fG~Vy~a~d~~t---g~~vAvKil~~~~~~~-~~-----~~~E~~il~~L~~~~~~~hpn 477 (722)
.+.++..++|++.++||+|+||+||+|.+..+ +..+|+|+........ .. ...+......+.......|++
T Consensus 5 ~~~~i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~ 84 (294)
T PHA02882 5 PLIDITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLG 84 (294)
T ss_pred eeeccCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCC
Confidence 34567778999999999999999999998777 6778888754332110 00 001111222222233457999
Q ss_pred eeEEEEEEEecC----eEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceE
Q 004954 478 ILRLYDYFYHLE----HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENIL 553 (722)
Q Consensus 478 Iv~l~~~f~~~~----~l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NIL 553 (722)
|+++++++.... ..+++|+++..++.+.+.... ..++..++.++.|++.||+|||+.+|+||||||+|||
T Consensus 85 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nil 158 (294)
T PHA02882 85 IPKYYGCGSFKRCRMYYRFILLEKLVENTKEIFKRIK------CKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIM 158 (294)
T ss_pred CCcEEEeeeEecCCceEEEEEEehhccCHHHHHHhhc------cCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEE
Confidence 999999776543 457888988777766654322 1567788999999999999999999999999999999
Q ss_pred EcccCCCeEEEEecCCcccccC----------CccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 004954 554 IKSYQRCEIKIIDLGSSCFQTD----------NLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPND 623 (722)
Q Consensus 554 l~~~~~~~vkL~DFGls~~~~~----------~~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~ 623 (722)
++. ++.++|+|||++..... ......||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.
T Consensus 159 l~~--~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~ 236 (294)
T PHA02882 159 VDG--NNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGF 236 (294)
T ss_pred EcC--CCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCcc
Confidence 985 77899999999865421 112346899999999999999999999999999999999999999876
Q ss_pred hHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCC
Q 004954 624 AVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINP 703 (722)
Q Consensus 624 ~~~e~l~~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP 703 (722)
.....+...... +.+ +.+. .... .....+..+.++++.|++.+|
T Consensus 237 ~~~~~~~~~~~~------~~~-------~~~~-------------~~~~----------~~~~~~~~~~~~~~~~~~~~~ 280 (294)
T PHA02882 237 GHNGNLIHAAKC------DFI-------KRLH-------------EGKI----------KIKNANKFIYDFIECVTKLSY 280 (294)
T ss_pred ccchHHHHHhHH------HHH-------HHhh-------------hhhh----------ccCCCCHHHHHHHHHHHhCCC
Confidence 322211111100 000 0000 0000 011234668999999999999
Q ss_pred CCCcCHHHHHh
Q 004954 704 QRRPTAREALD 714 (722)
Q Consensus 704 ~kRpTa~ElL~ 714 (722)
++||+..++++
T Consensus 281 ~~rp~~~~l~~ 291 (294)
T PHA02882 281 EEKPDYDALIK 291 (294)
T ss_pred CCCCCHHHHHH
Confidence 99999999975
No 296
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=1.5e-33 Score=290.54 Aligned_cols=245 Identities=23% Similarity=0.364 Sum_probs=197.2
Q ss_pred EEeccCCCCceEEEEECCC---CcEEEEEEeecchhh--hHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEE
Q 004954 420 EYLGSAAFSKVFQAQDLHT---GVDVCLKIIKNDKDF--FDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIV 494 (722)
Q Consensus 420 ~~LG~G~fG~Vy~a~d~~t---g~~vAvKil~~~~~~--~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~iV 494 (722)
+.||+|+||.||++.+... +..+|+|+++..... ...+.+|+++++.++ |+||+++++++......++|
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~------~~~i~~~~~~~~~~~~~~lv 74 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLG------HPNVVRLLGVCTEEEPLYLV 74 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcC------CCChheeeeeecCCCceEEE
Confidence 3699999999999998765 899999999865433 466777888887775 67999999999999999999
Q ss_pred EEccc-cchHHHHhhhhcc---CCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCc
Q 004954 495 CELLR-ANLYEFQKFNQES---GGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (722)
Q Consensus 495 mEy~~-gsLl~~l~~~~~~---~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 570 (722)
|||+. ++|.+++...... .....+++..++.++.||+.||.|||++|++|+||+|+||+++. ++.++|+|||.+
T Consensus 75 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~--~~~~~l~dfg~~ 152 (262)
T cd00192 75 LEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGE--DLVVKISDFGLS 152 (262)
T ss_pred EEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECC--CCcEEEcccccc
Confidence 99995 6777776654211 01233899999999999999999999999999999999999996 688999999998
Q ss_pred ccccCC-----ccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHHHH
Q 004954 571 CFQTDN-----LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEML 644 (722)
Q Consensus 571 ~~~~~~-----~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~~i~~~lg~~~~~~~ 644 (722)
...... .....+++.|+|||.+....++.++||||||+++|+|++ |..||......+....+...
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~--------- 223 (262)
T cd00192 153 RDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKG--------- 223 (262)
T ss_pred cccccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC---------
Confidence 765543 223456788999999998889999999999999999999 69999887665555444310
Q ss_pred hhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhC
Q 004954 645 MQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 715 (722)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~H 715 (722)
.....| ...+..+.++|.+||+.+|++|||+.+++++
T Consensus 224 -------------------------~~~~~~---------~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 260 (262)
T cd00192 224 -------------------------YRLPKP---------EYCPDELYELMLSCWQLDPEDRPTFSELVER 260 (262)
T ss_pred -------------------------CCCCCC---------ccCChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 000011 1124678899999999999999999999976
No 297
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=8.9e-35 Score=291.96 Aligned_cols=253 Identities=27% Similarity=0.381 Sum_probs=201.7
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEE
Q 004954 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF 492 (722)
Q Consensus 415 rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~--~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~ 492 (722)
..+++..||+|..|.||+++.+.+|..+|||.+.... ....+++..+.++...+ +.|+||+++++|..+..++
T Consensus 93 dl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~-----dcpyIV~c~GyFi~n~dV~ 167 (391)
T KOG0983|consen 93 DLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSH-----DCPYIVQCFGYFITNTDVF 167 (391)
T ss_pred HhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhcc-----CCCeeeeeeeEEeeCchHH
Confidence 3566778999999999999999999999999997643 33445555555554443 4689999999999999999
Q ss_pred EEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHC-CCccccCCCCceEEcccCCCeEEEEecCCcc
Q 004954 493 IVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL-GIIHCDLKPENILIKSYQRCEIKIIDLGSSC 571 (722)
Q Consensus 493 iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~-gIvHrDLKp~NILl~~~~~~~vkL~DFGls~ 571 (722)
|.||.|..-+..+++..+. ++++.-+-.+...+++||.||.++ ||+|||+||+|||++. .|.|||+|||.+.
T Consensus 168 IcMelMs~C~ekLlkrik~-----piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe--~GniKlCDFGIsG 240 (391)
T KOG0983|consen 168 ICMELMSTCAEKLLKRIKG-----PIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDE--RGNIKLCDFGISG 240 (391)
T ss_pred HHHHHHHHHHHHHHHHhcC-----CchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEcc--CCCEEeecccccc
Confidence 9999998665555554332 288888899999999999999865 7999999999999996 8999999999997
Q ss_pred cccCCc--cccccCCcccCchhhcC---CCCCchhhHHHHHHHHHHHHhCCCCCCCCh-HHHHHHHHHhhcCCCcHHHHh
Q 004954 572 FQTDNL--CLYVQSRSYRAPEVIIG---LPYDQKIDLWSLGCILAELWTGEVLFPNDA-VVMILARIIGMLGPIDLEMLM 645 (722)
Q Consensus 572 ~~~~~~--~~~~gt~~y~APE~l~~---~~~s~ksDIWSLGviL~elltG~~PF~~~~-~~e~l~~i~~~lg~~~~~~~~ 645 (722)
+..+.. +...|.+.|||||.+.- ..|+.++||||||++++||.||+.||++.+ ..+.+..+....
T Consensus 241 rlvdSkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~e--------- 311 (391)
T KOG0983|consen 241 RLVDSKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEE--------- 311 (391)
T ss_pred eeecccccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcC---------
Confidence 766543 34678999999999864 358899999999999999999999998853 445555553210
Q ss_pred hhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCCC
Q 004954 646 QGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 720 (722)
Q Consensus 646 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~~ 720 (722)
| ..|..+ ...++.|++|+..||+.|+.+||.-.++|+|||+..
T Consensus 312 -----------------------------P--P~L~~~-~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~~ 354 (391)
T KOG0983|consen 312 -----------------------------P--PLLPGH-MGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFIKR 354 (391)
T ss_pred -----------------------------C--CCCCcc-cCcCHHHHHHHHHHhhcCcccCcchHHHhcCcceee
Confidence 1 011111 114577999999999999999999999999999853
No 298
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=100.00 E-value=4.2e-35 Score=287.89 Aligned_cols=293 Identities=26% Similarity=0.435 Sum_probs=221.0
Q ss_pred CCcceeeCceecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEE
Q 004954 402 KDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481 (722)
Q Consensus 402 ~~~pi~~~~~l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l 481 (722)
..+-+.++ ..++|+|.+++|+|-++.|+.|.+..++++++||+++.-+. .++.+|++||+.|. +||||+++
T Consensus 28 E~~~i~wg--~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVkk--kKIkREikIL~nL~-----gg~NIi~L 98 (338)
T KOG0668|consen 28 ESLVIDWG--NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVKK--KKIKREIKILQNLR-----GGPNIIKL 98 (338)
T ss_pred hheeeecc--ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHHH--HHHHHHHHHHHhcc-----CCCCeeeh
Confidence 33444454 34789999999999999999999999999999999986543 67899999999997 47899999
Q ss_pred EEEEEecC--eEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCC
Q 004954 482 YDYFYHLE--HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQR 559 (722)
Q Consensus 482 ~~~f~~~~--~l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~ 559 (722)
+++..+.. ...+|+||++..- +....+. ++.-.++.++.+++.||.|+|++||+|||+||.|++|+. ..
T Consensus 99 ~DiV~Dp~SktpaLiFE~v~n~D--fk~ly~t------l~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh-~~ 169 (338)
T KOG0668|consen 99 LDIVKDPESKTPSLIFEYVNNTD--FKQLYPT------LTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDH-EL 169 (338)
T ss_pred hhhhcCccccCchhHhhhhcccc--HHHHhhh------hchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeech-hh
Confidence 99988764 5789999997642 2222222 778889999999999999999999999999999999996 45
Q ss_pred CeEEEEecCCcccccCCc--cccccCCcccCchhhcC-CCCCchhhHHHHHHHHHHHHhCCCCC-CCChHHHHHHHHHhh
Q 004954 560 CEIKIIDLGSSCFQTDNL--CLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLF-PNDAVVMILARIIGM 635 (722)
Q Consensus 560 ~~vkL~DFGls~~~~~~~--~~~~gt~~y~APE~l~~-~~~s~ksDIWSLGviL~elltG~~PF-~~~~~~e~l~~i~~~ 635 (722)
-.++|+|||+|.++.... ...+.+..|.-||.+.. +.|+...|+|||||+|..|+..+-|| .+.+..+++-+|.+.
T Consensus 170 rkLrlIDWGLAEFYHp~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakV 249 (338)
T KOG0668|consen 170 RKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKV 249 (338)
T ss_pred ceeeeeecchHhhcCCCceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHH
Confidence 689999999998876543 33567888999999875 45889999999999999999988776 788889999999999
Q ss_pred cCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhC
Q 004954 636 LGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 715 (722)
Q Consensus 636 lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~H 715 (722)
+|.-.......--.+ .+++.............+..-++... + ....++..|||.++|..|.++|+||.|++.|
T Consensus 250 LGt~el~~Yl~KY~i--~Ldp~~~~i~~~~~rk~w~~Fi~~~n---~--hl~~peaiDlldklLrYDHqeRlTakEam~H 322 (338)
T KOG0668|consen 250 LGTDELYAYLNKYQI--DLDPQFEDILGRHSRKPWSRFINSEN---Q--HLVSPEAIDLLDKLLRYDHQERLTAKEAMAH 322 (338)
T ss_pred hChHHHHHHHHHHcc--CCChhHhhHhhccccccHHHhCCccc---c--ccCChHHHHHHHHHHhhccccccchHHHhcC
Confidence 885433222111000 01111111111111111221121110 1 1224778999999999999999999999999
Q ss_pred CCCC
Q 004954 716 PWLQ 719 (722)
Q Consensus 716 Pwf~ 719 (722)
|||.
T Consensus 323 pyF~ 326 (338)
T KOG0668|consen 323 PYFA 326 (338)
T ss_pred chHH
Confidence 9995
No 299
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=6.2e-34 Score=309.27 Aligned_cols=255 Identities=24% Similarity=0.330 Sum_probs=193.8
Q ss_pred ecCcEEEEEEeccCCCCceEEEEEC-----CCCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEE
Q 004954 412 IAGRYYVTEYLGSAAFSKVFQAQDL-----HTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDY 484 (722)
Q Consensus 412 l~~rY~i~~~LG~G~fG~Vy~a~d~-----~tg~~vAvKil~~~~--~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~ 484 (722)
-.++|++.+.||+|+||.||+|.+. .+++.||+|+++... .....+..|+.+++.+. .|+||++++++
T Consensus 5 ~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~-----~h~niv~~~~~ 79 (337)
T cd05054 5 PRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIG-----HHLNVVNLLGA 79 (337)
T ss_pred CHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhc-----cCcchhheeee
Confidence 3468999999999999999999753 345789999987532 23355677888888774 37899999998
Q ss_pred EEec-CeEEEEEEcccc-chHHHHhhhhcc--------------------------------------------------
Q 004954 485 FYHL-EHLFIVCELLRA-NLYEFQKFNQES-------------------------------------------------- 512 (722)
Q Consensus 485 f~~~-~~l~iVmEy~~g-sLl~~l~~~~~~-------------------------------------------------- 512 (722)
+... ..+++||||+.+ +|.+++......
T Consensus 80 ~~~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (337)
T cd05054 80 CTKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEED 159 (337)
T ss_pred EecCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccc
Confidence 8754 578999999985 676666432210
Q ss_pred -----CCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCcccccCCc-----ccccc
Q 004954 513 -----GGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNL-----CLYVQ 582 (722)
Q Consensus 513 -----~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~~~~-----~~~~g 582 (722)
.....+++..+..++.||+.||+|||++||+||||||+|||++. ++.++|+|||++....... ....+
T Consensus 160 ~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~--~~~vkL~DfG~a~~~~~~~~~~~~~~~~~ 237 (337)
T cd05054 160 EEGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSE--NNVVKICDFGLARDIYKDPDYVRKGDARL 237 (337)
T ss_pred hhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeC--CCcEEEeccccchhcccCcchhhccCCCC
Confidence 00124788999999999999999999999999999999999995 7889999999987643221 12344
Q ss_pred CCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhcccccch
Q 004954 583 SRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLY 661 (722)
Q Consensus 583 t~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~ 661 (722)
+..|+|||++.+..++.++|||||||++|+|++ |..||.+....+.+...+..
T Consensus 238 ~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~-------------------------- 291 (337)
T cd05054 238 PLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKE-------------------------- 291 (337)
T ss_pred CccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhc--------------------------
Confidence 678999999999999999999999999999998 99999764333222221100
Q ss_pred hhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhC
Q 004954 662 YINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 715 (722)
Q Consensus 662 ~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~H 715 (722)
......| ....+.+.+++.+||+.+|++||++.|+++|
T Consensus 292 -------~~~~~~~---------~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~ 329 (337)
T cd05054 292 -------GTRMRAP---------EYATPEIYSIMLDCWHNNPEDRPTFSELVEI 329 (337)
T ss_pred -------cCCCCCC---------ccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 0000011 1223568899999999999999999999986
No 300
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-35 Score=311.46 Aligned_cols=260 Identities=28% Similarity=0.395 Sum_probs=204.8
Q ss_pred ceecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHh--------HHHHHHHHHHhcccCCCCCCceeEE
Q 004954 410 TVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQ--------SLDEIKLLKLVNKNDPADEHHILRL 481 (722)
Q Consensus 410 ~~l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~~~~~--------~~~E~~il~~L~~~~~~~hpnIv~l 481 (722)
..+.+||-++++||+|||+.||+|.|....++||+|+-..++.|.+. ..+|.+|.+. ++||.||++
T Consensus 459 ptLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKe------LDHpRIVKl 532 (775)
T KOG1151|consen 459 PTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKE------LDHPRIVKL 532 (775)
T ss_pred cchHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhc------cCcceeeee
Confidence 36789999999999999999999999999999999997766554332 3345555544 468899999
Q ss_pred EEEEEe-cCeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCC--CccccCCCCceEEccc-
Q 004954 482 YDYFYH-LEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLG--IIHCDLKPENILIKSY- 557 (722)
Q Consensus 482 ~~~f~~-~~~l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~g--IvHrDLKp~NILl~~~- 557 (722)
|++|.- .+.+|-|+|||+|+-+++....... +++.+++.|+.||+.||.||.+.. |||-||||.|||+...
T Consensus 533 YDyfslDtdsFCTVLEYceGNDLDFYLKQhkl-----mSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~Gt 607 (775)
T KOG1151|consen 533 YDYFSLDTDSFCTVLEYCEGNDLDFYLKQHKL-----MSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGT 607 (775)
T ss_pred eeeeeeccccceeeeeecCCCchhHHHHhhhh-----hhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCc
Confidence 999985 4678999999999888877654433 899999999999999999999875 9999999999998643
Q ss_pred CCCeEEEEecCCcccccCCc----------cccccCCcccCchhhcCC----CCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 004954 558 QRCEIKIIDLGSSCFQTDNL----------CLYVQSRSYRAPEVIIGL----PYDQKIDLWSLGCILAELWTGEVLFPND 623 (722)
Q Consensus 558 ~~~~vkL~DFGls~~~~~~~----------~~~~gt~~y~APE~l~~~----~~s~ksDIWSLGviL~elltG~~PF~~~ 623 (722)
.-|.|||+|||+++...+.. ....||.+|+|||++.-. +++.++||||+|||+|.++.|+.||..+
T Consensus 608 acGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhn 687 (775)
T KOG1151|consen 608 ACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHN 687 (775)
T ss_pred ccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCc
Confidence 34689999999998765432 235789999999998633 4789999999999999999999999775
Q ss_pred hHH-HHHHHHHhhcCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccC
Q 004954 624 AVV-MILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEIN 702 (722)
Q Consensus 624 ~~~-e~l~~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~d 702 (722)
... +++..- ......+-.+|..+ ..+.+.++||++||++.
T Consensus 688 qsQQdILqeN--------------------------------TIlkAtEVqFP~KP-------vVsseAkaFIRRCLaYR 728 (775)
T KOG1151|consen 688 QSQQDILQEN--------------------------------TILKATEVQFPPKP-------VVSSEAKAFIRRCLAYR 728 (775)
T ss_pred hhHHHHHhhh--------------------------------chhcceeccCCCCC-------ccCHHHHHHHHHHHHhh
Confidence 432 333220 00111122333332 23466889999999999
Q ss_pred CCCCcCHHHHHhCCCCC
Q 004954 703 PQRRPTAREALDHPWLQ 719 (722)
Q Consensus 703 P~kRpTa~ElL~HPwf~ 719 (722)
-+.|....++..||+|.
T Consensus 729 KeDR~DV~qLA~dpyll 745 (775)
T KOG1151|consen 729 KEDRIDVQQLACDPYLL 745 (775)
T ss_pred hhhhhhHHHHccCcccc
Confidence 99999999999999984
No 301
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=2.6e-33 Score=290.52 Aligned_cols=243 Identities=21% Similarity=0.332 Sum_probs=194.6
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEE-ecCeEE
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY-HLEHLF 492 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~-~~~~l~ 492 (722)
.+|++.+.||+|+||.||++.. .|..+|+|.++.... .+.+.+|+.+++.++ |+|++++++++. .....+
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~--~~~~~~~k~~~~~~~-~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~~~ 76 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDAT-AQAFLAEASVMTQLR------HSNLVQLLGVIVEEKGGLY 76 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEE--cCCcEEEEEeCCCch-HHHHHHHHHHHHhCC------CCCeeeEEEEEEcCCCceE
Confidence 5799999999999999999975 478899999876543 356778888888775 679999999765 456799
Q ss_pred EEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCcc
Q 004954 493 IVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 571 (722)
Q Consensus 493 iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~ 571 (722)
+||||+.+ +|.+++..... ..+++..+..++.||+.||+|||++|++||||||+||+++. ++.+||+|||++.
T Consensus 77 lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~--~~~~kl~dfg~~~ 150 (256)
T cd05082 77 IVTEYMAKGSLVDYLRSRGR----SVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSE--DNVAKVSDFGLTK 150 (256)
T ss_pred EEEECCCCCcHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcC--CCcEEecCCccce
Confidence 99999974 77777664322 23788999999999999999999999999999999999985 7889999999987
Q ss_pred cccCCccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhh
Q 004954 572 FQTDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEI 650 (722)
Q Consensus 572 ~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~~~ 650 (722)
...........+..|+|||++.+..++.++|||||||++|+|++ |+.||......+....+....
T Consensus 151 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~-------------- 216 (256)
T cd05082 151 EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGY-------------- 216 (256)
T ss_pred eccccCCCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCC--------------
Confidence 65444444455678999999998889999999999999999998 999998765555443332100
Q ss_pred hhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHh
Q 004954 651 YKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 714 (722)
Q Consensus 651 ~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~ 714 (722)
....+ ...+..+.++|.+||+.+|++|||+.++++
T Consensus 217 --------------------~~~~~---------~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 251 (256)
T cd05082 217 --------------------KMDAP---------DGCPPVVYDVMKQCWHLDAATRPSFLQLRE 251 (256)
T ss_pred --------------------CCCCC---------CCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 00000 123467889999999999999999999986
No 302
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=9.5e-34 Score=295.03 Aligned_cols=249 Identities=27% Similarity=0.381 Sum_probs=196.3
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc----hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~----~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (722)
++|++.+.||+|+||.||++++..+++.+|||.+... ......+.+|+.+++.+. |+||+++++++...+
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~------h~~i~~~~~~~~~~~ 75 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLN------HPNVIKYYASFIEDN 75 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHcc------CCchhhhhheeEeCC
Confidence 4688999999999999999999999999999987642 223356677888887774 689999999999999
Q ss_pred eEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecC
Q 004954 490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (722)
Q Consensus 490 ~l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFG 568 (722)
..++||||+.+ +|.+++..... ....+++..++.++.||+.||.|||++|++|+||||+||+++. ++.++|+|||
T Consensus 76 ~~~~v~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~--~~~~~l~dfg 151 (267)
T cd08229 76 ELNIVLELADAGDLSRMIKHFKK--QKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITA--TGVVKLGDLG 151 (267)
T ss_pred eEEEEEEecCCCCHHHHHHHhhc--cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcC--CCCEEECcch
Confidence 99999999985 67766654322 2234889999999999999999999999999999999999985 7789999999
Q ss_pred CcccccCCc---cccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHH--HHHHHHHhhcCCCcHHH
Q 004954 569 SSCFQTDNL---CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVV--MILARIIGMLGPIDLEM 643 (722)
Q Consensus 569 ls~~~~~~~---~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~--e~l~~i~~~lg~~~~~~ 643 (722)
++....... ....+++.|+|||.+.+..++.++|+||||+++|+|++|..||.+.... .....+...
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-------- 223 (267)
T cd08229 152 LGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQC-------- 223 (267)
T ss_pred hhhccccCCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcC--------
Confidence 886654322 2346788999999999988999999999999999999999999654321 111111100
Q ss_pred HhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHh
Q 004954 644 LMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 714 (722)
Q Consensus 644 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~ 714 (722)
..+... ....++.+.+||.+||+.||++|||+.+|++
T Consensus 224 -----------------------------~~~~~~-----~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~ 260 (267)
T cd08229 224 -----------------------------DYPPLP-----SDHYSEELRQLVNMCINPDPEKRPDITYVYD 260 (267)
T ss_pred -----------------------------CCCCCC-----cccccHHHHHHHHHhcCCCcccCCCHHHHHH
Confidence 000000 0123467899999999999999999998764
No 303
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=4.1e-33 Score=290.63 Aligned_cols=248 Identities=27% Similarity=0.397 Sum_probs=196.5
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc------hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND------KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 487 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~------~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~ 487 (722)
.+|++.+.||+|+||.||++++..+++.+|+|++... ......+.+|+.+++.++ |+||+++++.+..
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~------h~~i~~~~~~~~~ 75 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLR------HDRIVQYYGCLRD 75 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcC------CCCcceEEEEEEc
Confidence 4799999999999999999999999999999987532 123346667888888775 6799999999876
Q ss_pred c--CeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEE
Q 004954 488 L--EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKI 564 (722)
Q Consensus 488 ~--~~l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL 564 (722)
. ..+++||||+.+ +|.+.+.... .+++..++.++.||+.||.|||+.|++|+||||+||+++. ++.++|
T Consensus 76 ~~~~~~~~v~e~~~~~~L~~~~~~~~------~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~--~~~~~l 147 (264)
T cd06653 76 PEEKKLSIFVEYMPGGSIKDQLKAYG------ALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDS--AGNVKL 147 (264)
T ss_pred CCCCEEEEEEEeCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcC--CCCEEE
Confidence 4 468899999975 6666665321 2788899999999999999999999999999999999985 778999
Q ss_pred EecCCcccccC------CccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCC
Q 004954 565 IDLGSSCFQTD------NLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGP 638 (722)
Q Consensus 565 ~DFGls~~~~~------~~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~ 638 (722)
+|||++..... ......++..|+|||.+.+..++.++|+|||||++|+|++|+.||..........++.. .
T Consensus 148 ~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~---~ 224 (264)
T cd06653 148 GDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIAT---Q 224 (264)
T ss_pred CccccccccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHc---C
Confidence 99999865432 11234678899999999998899999999999999999999999976544433322210 0
Q ss_pred CcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCC
Q 004954 639 IDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 718 (722)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf 718 (722)
. ....+| ...+..+.++|++||+ +|.+|||+.++|.|||.
T Consensus 225 ~------------------------------~~~~~p---------~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~~~~ 264 (264)
T cd06653 225 P------------------------------TKPMLP---------DGVSDACRDFLKQIFV-EEKRRPTAEFLLRHPFV 264 (264)
T ss_pred C------------------------------CCCCCC---------cccCHHHHHHHHHHhc-CcccCccHHHHhcCCCC
Confidence 0 001111 1234668999999999 57999999999999994
No 304
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.8e-34 Score=317.91 Aligned_cols=252 Identities=29% Similarity=0.498 Sum_probs=212.1
Q ss_pred ecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec
Q 004954 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 488 (722)
Q Consensus 412 l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~---~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~ 488 (722)
-.+.|.++++||+|.|++|.++++..++..||||++.+.. .......+|+++++.|+ |||||+++.+....
T Consensus 54 ~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~------HPnIvkl~~v~~t~ 127 (596)
T KOG0586|consen 54 SVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLN------HPNIVKLFSVIETE 127 (596)
T ss_pred cccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcC------Ccceeeeeeeeeec
Confidence 3577999999999999999999999999999999997643 33445778888888886 78999999999999
Q ss_pred CeEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEec
Q 004954 489 EHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDL 567 (722)
Q Consensus 489 ~~l~iVmEy~~-gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DF 567 (722)
..+|+||||+. |.+.+++..+.. ..+..+..++.|++.|++|||+++|+|||||++|||++. +..+||+||
T Consensus 128 ~~lylV~eya~~ge~~~yl~~~gr------~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~--~mnikIaDf 199 (596)
T KOG0586|consen 128 ATLYLVMEYASGGELFDYLVKHGR------MKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDE--NMNIKIADF 199 (596)
T ss_pred ceeEEEEEeccCchhHHHHHhccc------chhhhhhhhhHHHHHHHHHHhhcceeccccchhhccccc--ccceeeecc
Confidence 99999999996 578888876654 566889999999999999999999999999999999995 788999999
Q ss_pred CCcccccC--CccccccCCcccCchhhcCCCCC-chhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHH
Q 004954 568 GSSCFQTD--NLCLYVQSRSYRAPEVIIGLPYD-QKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEML 644 (722)
Q Consensus 568 Gls~~~~~--~~~~~~gt~~y~APE~l~~~~~s-~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~ 644 (722)
|++.++.. ...+.+|++.|.|||++.+..|. .++|+||+|+++|.|+.|.+||.+.+..++-.+.+.
T Consensus 200 gfS~~~~~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~---------- 269 (596)
T KOG0586|consen 200 GFSTFFDYGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLR---------- 269 (596)
T ss_pred ccceeecccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchhee----------
Confidence 99987654 35668999999999999998865 789999999999999999999988765444333321
Q ss_pred hhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCCCC
Q 004954 645 MQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQHP 721 (722)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~~~ 721 (722)
..+.||. ....+..+||+++|..+|.+|++.+++..|.|+...
T Consensus 270 -------------------------gk~rIp~---------~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~~ 312 (596)
T KOG0586|consen 270 -------------------------GKYRIPF---------YMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRNDL 312 (596)
T ss_pred -------------------------eeecccc---------eeechhHHHHHHhhccCccccCCHHHhhhhcccchh
Confidence 1122222 123456799999999999999999999999998653
No 305
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=1.7e-33 Score=289.70 Aligned_cols=239 Identities=32% Similarity=0.503 Sum_probs=197.4
Q ss_pred eccCCCCceEEEEECCCCcEEEEEEeecchh----hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEEEc
Q 004954 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD----FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCEL 497 (722)
Q Consensus 422 LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~----~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~iVmEy 497 (722)
||.|+||.||++.+..+++.+|+|++..... ....+..|+.+++.++ |+||+++++.+......++||||
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~~~~v~e~ 74 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRIN------HPFIVKLHYAFQTEEKLYLVLEY 74 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcC------CCcHHHHHHHeecCCeeEEEEec
Confidence 6999999999999988999999999876432 3456777888888775 68999999999999999999999
Q ss_pred cc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCcccccCC
Q 004954 498 LR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDN 576 (722)
Q Consensus 498 ~~-gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~~~ 576 (722)
+. ++|.+++.... .+++..+..++.|++.||.|||+.+++|+||+|+||+++. ++.++|+|||++......
T Consensus 75 ~~~~~L~~~l~~~~------~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~--~~~~~l~d~~~~~~~~~~ 146 (250)
T cd05123 75 APGGELFSHLSKEG------RFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDA--DGHIKLTDFGLAKELSSE 146 (250)
T ss_pred CCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcC--CCcEEEeecCcceecccC
Confidence 95 67777766432 2889999999999999999999999999999999999986 778999999998765442
Q ss_pred ---ccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhhhh
Q 004954 577 ---LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKY 653 (722)
Q Consensus 577 ---~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~~~~~~ 653 (722)
.....++..|+|||.+.+...+.++|+||||+++|+|++|..||...+.......+...
T Consensus 147 ~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~------------------ 208 (250)
T cd05123 147 GSRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKD------------------ 208 (250)
T ss_pred CCcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcC------------------
Confidence 33456788999999999888899999999999999999999999776654444443210
Q ss_pred hcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCH---HHHHhCCCC
Q 004954 654 FTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTA---REALDHPWL 718 (722)
Q Consensus 654 ~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa---~ElL~HPwf 718 (722)
...+|. ..+..+.++|++||..||++|||+ .++++||||
T Consensus 209 -----------------~~~~~~---------~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~~~f 250 (250)
T cd05123 209 -----------------PLRFPE---------FLSPEARDLISGLLQKDPTKRLGSGGAEEIKAHPFF 250 (250)
T ss_pred -----------------CCCCCC---------CCCHHHHHHHHHHhcCCHhhCCCcccHHHHHhCCCC
Confidence 001111 114568899999999999999999 999999998
No 306
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=2.4e-33 Score=292.40 Aligned_cols=247 Identities=21% Similarity=0.296 Sum_probs=195.8
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCC---CcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 004954 413 AGRYYVTEYLGSAAFSKVFQAQDLHT---GVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 487 (722)
Q Consensus 413 ~~rY~i~~~LG~G~fG~Vy~a~d~~t---g~~vAvKil~~~~--~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~ 487 (722)
.++|++.+.||+|+||+||+|.+..+ ...+|||+++... .....+.+|+.+++.++ ||||+++++.+..
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~ 76 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFD------HPNIIRLEGVVTK 76 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCC------CCCcceEeEEEec
Confidence 35799999999999999999998644 4579999987542 23345667888877774 6899999999999
Q ss_pred cCeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEe
Q 004954 488 LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIID 566 (722)
Q Consensus 488 ~~~l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~D 566 (722)
.+..++||||+.+ +|.+++..... .+++..++.++.|++.||+|||+.+|+|+||||+||+++. ++.++|+|
T Consensus 77 ~~~~~iv~e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~--~~~~~l~d 149 (266)
T cd05033 77 SRPVMIITEYMENGSLDKFLRENDG-----KFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNS--NLVCKVSD 149 (266)
T ss_pred CCceEEEEEcCCCCCHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcC--CCCEEECc
Confidence 9999999999975 67666654321 3889999999999999999999999999999999999986 78899999
Q ss_pred cCCcccccCCcc-----ccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCc
Q 004954 567 LGSSCFQTDNLC-----LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPID 640 (722)
Q Consensus 567 FGls~~~~~~~~-----~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~~i~~~lg~~~ 640 (722)
||++........ ...+++.|+|||.+.+..++.++||||||+++|+|++ |..||......+....+.....
T Consensus 150 fg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~--- 226 (266)
T cd05033 150 FGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGYR--- 226 (266)
T ss_pred cchhhcccccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCC---
Confidence 999876642111 1233567999999998899999999999999999998 9999977655554444321100
Q ss_pred HHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhC
Q 004954 641 LEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 715 (722)
Q Consensus 641 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~H 715 (722)
.|. ....+..+.+|+.+||+.+|++||++.+++++
T Consensus 227 ---------------------------------~~~-------~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~ 261 (266)
T cd05033 227 ---------------------------------LPP-------PMDCPSALYQLMLDCWQKDRNERPTFSQIVST 261 (266)
T ss_pred ---------------------------------CCC-------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 000 01224568899999999999999999999875
No 307
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=2.9e-33 Score=295.73 Aligned_cols=253 Identities=26% Similarity=0.414 Sum_probs=196.5
Q ss_pred cEEEEEEeccCCCCceEEEEEC---CCCcEEEEEEeecch-----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEE
Q 004954 415 RYYVTEYLGSAAFSKVFQAQDL---HTGVDVCLKIIKNDK-----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY 486 (722)
Q Consensus 415 rY~i~~~LG~G~fG~Vy~a~d~---~tg~~vAvKil~~~~-----~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~ 486 (722)
.|++.+.||.|+||.||++++. .+|+.||+|+++... .......+|+++++.+.+ |++|+++++.+.
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~-----~~~i~~~~~~~~ 75 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQ-----SPFLVTLHYAFQ 75 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhccc-----CCChhceeeEee
Confidence 4889999999999999999874 478999999987532 223456678888888753 689999999999
Q ss_pred ecCeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEE
Q 004954 487 HLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKII 565 (722)
Q Consensus 487 ~~~~l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~ 565 (722)
.....++||||+.+ +|.+.+.... .+++..+..++.|++.||.|||+.|++||||+|+|||++. ++.++|+
T Consensus 76 ~~~~~~lv~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~--~~~~kl~ 147 (290)
T cd05613 76 TDTKLHLILDYINGGELFTHLSQRE------RFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDS--NGHVVLT 147 (290)
T ss_pred cCCeEEEEEecCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECC--CCCEEEe
Confidence 99999999999985 6766665332 2788999999999999999999999999999999999986 7889999
Q ss_pred ecCCcccccCC----ccccccCCcccCchhhcCC--CCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCC
Q 004954 566 DLGSSCFQTDN----LCLYVQSRSYRAPEVIIGL--PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPI 639 (722)
Q Consensus 566 DFGls~~~~~~----~~~~~gt~~y~APE~l~~~--~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~ 639 (722)
|||++...... .....++..|+|||.+.+. .++.++||||||+++|+|++|..||...........+....
T Consensus 148 dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~--- 224 (290)
T cd05613 148 DFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRI--- 224 (290)
T ss_pred eCccceecccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHh---
Confidence 99988654332 1234578899999998753 46789999999999999999999996432111111111000
Q ss_pred cHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCc-----CHHHHHh
Q 004954 640 DLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRP-----TAREALD 714 (722)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRp-----Ta~ElL~ 714 (722)
. ......| ...+..+.+||++||+.||.+|| ++.+++.
T Consensus 225 ---------------~-------------~~~~~~~---------~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 225 ---------------L-------------KSEPPYP---------QEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred ---------------h-------------ccCCCCC---------ccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence 0 0000011 12346688999999999999997 8999999
Q ss_pred CCCCCC
Q 004954 715 HPWLQH 720 (722)
Q Consensus 715 HPwf~~ 720 (722)
||||+.
T Consensus 268 ~~~~~~ 273 (290)
T cd05613 268 HPFFQK 273 (290)
T ss_pred Cccccc
Confidence 999975
No 308
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-34 Score=316.02 Aligned_cols=253 Identities=23% Similarity=0.321 Sum_probs=203.2
Q ss_pred eeeCceecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEE
Q 004954 406 IILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLY 482 (722)
Q Consensus 406 i~~~~~l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~---~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~ 482 (722)
...+++..+...+...||+|.||+||+|++.. .||||+++.+ ....+.+.+|+.+++.-+ |.||+-+.
T Consensus 384 ~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG---dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTR------H~NIlLFM 454 (678)
T KOG0193|consen 384 LEEWEIPPEEVLLGERIGSGSFGTVYRGRWHG---DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTR------HENILLFM 454 (678)
T ss_pred ccccccCHHHhhccceeccccccceeeccccc---ceEEEEEecCCCCHHHHHHHHHHHHHHhhcc------hhhheeee
Confidence 35566777888999999999999999999754 5999999753 456778889999999887 45899999
Q ss_pred EEEEecCeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCe
Q 004954 483 DYFYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCE 561 (722)
Q Consensus 483 ~~f~~~~~l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~ 561 (722)
|++..... .||+-+|+| +|+..++..... |.+.+++.|++||++||.|||.++|||||||..||++.. ++.
T Consensus 455 G~~~~p~~-AIiTqwCeGsSLY~hlHv~etk-----fdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~--~~k 526 (678)
T KOG0193|consen 455 GACMNPPL-AIITQWCEGSSLYTHLHVQETK-----FDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHE--DLK 526 (678)
T ss_pred hhhcCCce-eeeehhccCchhhhhccchhhh-----hhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEcc--CCc
Confidence 99988777 999999998 677777654432 899999999999999999999999999999999999995 699
Q ss_pred EEEEecCCcccccC-----CccccccCCcccCchhhcC---CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHH
Q 004954 562 IKIIDLGSSCFQTD-----NLCLYVQSRSYRAPEVIIG---LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARII 633 (722)
Q Consensus 562 vkL~DFGls~~~~~-----~~~~~~gt~~y~APE~l~~---~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~ 633 (722)
|||+|||++..... ......+...|||||++.. .+|+.++||||||+++|||++|.+||.......++..+-
T Consensus 527 VkIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVG 606 (678)
T KOG0193|consen 527 VKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVG 606 (678)
T ss_pred EEEecccceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEec
Confidence 99999999854332 2333456778999999973 579999999999999999999999999766655553332
Q ss_pred hhcCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHH
Q 004954 634 GMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREAL 713 (722)
Q Consensus 634 ~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL 713 (722)
...+ .|. +.......+.++++|+..||..++++||...+||
T Consensus 607 rG~l------------------------------------~pd---~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il 647 (678)
T KOG0193|consen 607 RGYL------------------------------------MPD---LSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLL 647 (678)
T ss_pred cccc------------------------------------Ccc---chhhhccCHHHHHHHHHHHHhcCcccCccHHHHH
Confidence 1111 111 1111223345799999999999999999999888
Q ss_pred h
Q 004954 714 D 714 (722)
Q Consensus 714 ~ 714 (722)
.
T Consensus 648 ~ 648 (678)
T KOG0193|consen 648 S 648 (678)
T ss_pred H
Confidence 6
No 309
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=5.3e-33 Score=287.60 Aligned_cols=245 Identities=20% Similarity=0.340 Sum_probs=196.1
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEE
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFI 493 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~i 493 (722)
.+|++.+.||+|+||.||++.+. .++.+|+|++.........+.+|+++++.+. ||+|+++++++......++
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~~~ 76 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAMSEEDFIEEAQVMMKLS------HPKLVQLYGVCTERSPICL 76 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCCCHHHHHHHHHHHHhCC------CCCeeeEEEEEccCCceEE
Confidence 47899999999999999999875 4778999998765544567788999888874 6799999999999999999
Q ss_pred EEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCccc
Q 004954 494 VCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF 572 (722)
Q Consensus 494 VmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~ 572 (722)
||||+.+ +|.+++.... ..+++..++.++.|++.||++||+.+++|+||||+||+++. ++.++|+|||.+..
T Consensus 77 v~e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~--~~~~~l~d~g~~~~ 149 (256)
T cd05112 77 VFEFMEHGCLSDYLRAQR-----GKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGE--NQVVKVSDFGMTRF 149 (256)
T ss_pred EEEcCCCCcHHHHHHhCc-----cCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcC--CCeEEECCCcceee
Confidence 9999986 5555554322 13788999999999999999999999999999999999985 77899999998865
Q ss_pred ccCCcc----ccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 004954 573 QTDNLC----LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 647 (722)
Q Consensus 573 ~~~~~~----~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~ 647 (722)
...... ...++..|+|||.+.+..++.++||||||+++|+|++ |..||...........+....
T Consensus 150 ~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~----------- 218 (256)
T cd05112 150 VLDDQYTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGF----------- 218 (256)
T ss_pred cccCcccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCC-----------
Confidence 433221 1234568999999998889999999999999999998 999998766555544432110
Q ss_pred hhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhC
Q 004954 648 QEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 715 (722)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~H 715 (722)
....| ...+..+.+|+.+||+.+|.+|||+.+++++
T Consensus 219 -----------------------~~~~~---------~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~ 254 (256)
T cd05112 219 -----------------------RLYKP---------RLASQSVYELMQHCWKERPEDRPSFSLLLHQ 254 (256)
T ss_pred -----------------------CCCCC---------CCCCHHHHHHHHHHcccChhhCCCHHHHHHh
Confidence 00011 1123568899999999999999999999974
No 310
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=3.2e-33 Score=295.74 Aligned_cols=258 Identities=21% Similarity=0.248 Sum_probs=197.9
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCC----------------cEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCC
Q 004954 413 AGRYYVTEYLGSAAFSKVFQAQDLHTG----------------VDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPAD 474 (722)
Q Consensus 413 ~~rY~i~~~LG~G~fG~Vy~a~d~~tg----------------~~vAvKil~~~~--~~~~~~~~E~~il~~L~~~~~~~ 474 (722)
.++|++.+.||+|+||.||++.+...+ ..+|+|.+.... .....+.+|+++++.++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~------ 77 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLS------ 77 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcC------
Confidence 468999999999999999999876544 568999987543 34456778888888875
Q ss_pred CCceeEEEEEEEecCeEEEEEEcccc-chHHHHhhhhcc-----CCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCC
Q 004954 475 EHHILRLYDYFYHLEHLFIVCELLRA-NLYEFQKFNQES-----GGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLK 548 (722)
Q Consensus 475 hpnIv~l~~~f~~~~~l~iVmEy~~g-sLl~~l~~~~~~-----~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLK 548 (722)
||||+++++++...+..++||||+.+ +|.+++...... .....+++..++.++.|++.||+|||+.||+|+|||
T Consensus 78 ~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlk 157 (296)
T cd05051 78 DPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLA 157 (296)
T ss_pred CCCEeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccc
Confidence 67999999999999999999999975 676666543211 111248999999999999999999999999999999
Q ss_pred CCceEEcccCCCeEEEEecCCcccccCC-----ccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh--CCCCCC
Q 004954 549 PENILIKSYQRCEIKIIDLGSSCFQTDN-----LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT--GEVLFP 621 (722)
Q Consensus 549 p~NILl~~~~~~~vkL~DFGls~~~~~~-----~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt--G~~PF~ 621 (722)
|+||+++. ++.++|+|||++...... .....+++.|+|||.+.+..++.++|||||||++|+|++ |..||.
T Consensus 158 p~Nili~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~ 235 (296)
T cd05051 158 TRNCLVGK--NYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYE 235 (296)
T ss_pred hhceeecC--CCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCC
Confidence 99999996 688999999998654322 122345678999999998889999999999999999998 788887
Q ss_pred CChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhccc
Q 004954 622 NDAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEI 701 (722)
Q Consensus 622 ~~~~~e~l~~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~ 701 (722)
..+..+.+..+........ .....+ .....+.++.+||.+||+.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~-------~~~~~~~~l~~li~~cl~~ 279 (296)
T cd05051 236 HLTDQQVIENAGHFFRDDG-----------------------------RQIYLP-------RPPNCPKDIYELMLECWRR 279 (296)
T ss_pred CcChHHHHHHHHhcccccc-----------------------------ccccCC-------CccCCCHHHHHHHHHHhcc
Confidence 7665555544432110000 000000 0112346789999999999
Q ss_pred CCCCCcCHHHHHh
Q 004954 702 NPQRRPTAREALD 714 (722)
Q Consensus 702 dP~kRpTa~ElL~ 714 (722)
||.+|||+.|+++
T Consensus 280 ~p~~Rpt~~el~~ 292 (296)
T cd05051 280 DEEDRPTFREIHL 292 (296)
T ss_pred ChhcCCCHHHHHH
Confidence 9999999999975
No 311
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.6e-34 Score=318.52 Aligned_cols=250 Identities=27% Similarity=0.479 Sum_probs=208.8
Q ss_pred CcE-EEEEEeccCCCCceEEEEECCCCcEEEEEEee-----cchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 004954 414 GRY-YVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK-----NDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 487 (722)
Q Consensus 414 ~rY-~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~-----~~~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~ 487 (722)
+|| +...+||+|+|-+||+|.|..+|..||.-.++ +.....+++..|+.+|+.|+ |+||+++|+.+.+
T Consensus 39 gRy~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~------H~NIirfy~SW~d 112 (632)
T KOG0584|consen 39 GRYLKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLK------HPNIIRFYDSWVD 112 (632)
T ss_pred CceeehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCC------CCceeeeeeheec
Confidence 444 34567999999999999999999999864433 23445578899999999886 6799999999997
Q ss_pred cCe--EEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCC--CccccCCCCceEEcccCCCeE
Q 004954 488 LEH--LFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLG--IIHCDLKPENILIKSYQRCEI 562 (722)
Q Consensus 488 ~~~--l~iVmEy~~-gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~g--IvHrDLKp~NILl~~~~~~~v 562 (722)
... +.+|+|.+. |+|..+.+..+. +..+.++.|++||++||.|||++. |||||||-+||+|+. ..|.|
T Consensus 113 ~~n~~in~iTEL~TSGtLr~Y~kk~~~------vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG-~~G~V 185 (632)
T KOG0584|consen 113 TDNKTINFITELFTSGTLREYRKKHRR------VNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNG-NLGEV 185 (632)
T ss_pred CCCceeeeeeecccCCcHHHHHHHhcc------CCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcC-CcCce
Confidence 754 889999996 788888876654 788899999999999999999985 999999999999995 68999
Q ss_pred EEEecCCcccccCCcc-ccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC-ChHHHHHHHHHhhcCCCc
Q 004954 563 KIIDLGSSCFQTDNLC-LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPN-DAVVMILARIIGMLGPID 640 (722)
Q Consensus 563 kL~DFGls~~~~~~~~-~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~-~~~~e~l~~i~~~lg~~~ 640 (722)
||+|+|+|........ ..+|||.|||||++. ..|...+||||||++|+||+|+..||.. .++.+++.+++..+-|
T Consensus 186 KIGDLGLAtl~r~s~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP-- 262 (632)
T KOG0584|consen 186 KIGDLGLATLLRKSHAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKP-- 262 (632)
T ss_pred eecchhHHHHhhccccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCH--
Confidence 9999999988776544 468999999999998 6799999999999999999999999964 5666777776532211
Q ss_pred HHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCCC
Q 004954 641 LEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 720 (722)
Q Consensus 641 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~~ 720 (722)
. ...+..+++.++||.+||.. .+.|+|+.|||.||||+.
T Consensus 263 -~---------------------------------------sl~kV~dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~ 301 (632)
T KOG0584|consen 263 -A---------------------------------------ALSKVKDPEVREFIEKCLAT-KSERLSAKELLKDPFFDE 301 (632)
T ss_pred -H---------------------------------------HhhccCCHHHHHHHHHHhcC-chhccCHHHHhhChhhcc
Confidence 1 11234468899999999999 999999999999999974
No 312
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=6.3e-33 Score=288.23 Aligned_cols=249 Identities=28% Similarity=0.372 Sum_probs=196.9
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc----hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~----~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (722)
++|++.+.||+|+||.||+|.+..+|+.+|+|.++.. ......+.+|+++++.++ |++|+++++.+...+
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~------~~~i~~~~~~~~~~~ 75 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLD------HPNVIKYLASFIENN 75 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCC------CCCeeeeeeeeecCC
Confidence 5899999999999999999999989999999988642 223456778888888775 679999999999999
Q ss_pred eEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecC
Q 004954 490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (722)
Q Consensus 490 ~l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFG 568 (722)
..++||||+.+ +|..++..... ....+++..++.++.|++.||.|||+.||+|+||+|+||+++. ++.++|+|||
T Consensus 76 ~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~--~~~~~l~d~~ 151 (267)
T cd08224 76 ELNIVLELADAGDLSRMIKHFKK--QKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITA--TGVVKLGDLG 151 (267)
T ss_pred eEEEEEecCCCCCHHHHHHHhcc--cCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECC--CCcEEEeccc
Confidence 99999999985 67766654322 1234889999999999999999999999999999999999986 7789999999
Q ss_pred CcccccCC---ccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChH--HHHHHHHHhhcCCCcHHH
Q 004954 569 SSCFQTDN---LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAV--VMILARIIGMLGPIDLEM 643 (722)
Q Consensus 569 ls~~~~~~---~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~--~e~l~~i~~~lg~~~~~~ 643 (722)
++...... .....+++.|+|||.+.+..++.++|+|||||++|+|++|+.||..... .+....+..
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~--------- 222 (267)
T cd08224 152 LGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEK--------- 222 (267)
T ss_pred eeeeccCCCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhc---------
Confidence 98654432 2234678899999999998899999999999999999999999965421 111111110
Q ss_pred HhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHh
Q 004954 644 LMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 714 (722)
Q Consensus 644 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~ 714 (722)
......|. ...+..+.++|.+||..+|++|||+.++++
T Consensus 223 -------------------------~~~~~~~~--------~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~ 260 (267)
T cd08224 223 -------------------------CDYPPLPA--------DHYSEELRDLVSRCINPDPEKRPDISYVLQ 260 (267)
T ss_pred -------------------------CCCCCCCh--------hhcCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 00000110 122456889999999999999999999885
No 313
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-35 Score=338.78 Aligned_cols=254 Identities=24% Similarity=0.373 Sum_probs=209.3
Q ss_pred ecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc----hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 004954 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 487 (722)
Q Consensus 412 l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~----~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~ 487 (722)
-.++|.|+++||+|+||.|.+++++.+++.||+|++.+- ......+..|..+|..-. .+-|+++..+|++
T Consensus 73 ~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~n------s~Wiv~LhyAFQD 146 (1317)
T KOG0612|consen 73 KAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGN------SEWIVQLHYAFQD 146 (1317)
T ss_pred CHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCC------cHHHHHHHHHhcC
Confidence 357899999999999999999999999999999999762 223345566666776554 3589999999999
Q ss_pred cCeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEe
Q 004954 488 LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIID 566 (722)
Q Consensus 488 ~~~l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~D 566 (722)
..++|+|||||.| +|+.++.... .+++..++.++..|+-||.-||+.|+|||||||+||||+. .|.|||+|
T Consensus 147 ~~~LYlVMdY~pGGDlltLlSk~~------~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~--~GHikLAD 218 (1317)
T KOG0612|consen 147 ERYLYLVMDYMPGGDLLTLLSKFD------RLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDK--SGHIKLAD 218 (1317)
T ss_pred ccceEEEEecccCchHHHHHhhcC------CChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecc--cCcEeecc
Confidence 9999999999975 6777776443 2999999999999999999999999999999999999996 89999999
Q ss_pred cCCcccccCC----ccccccCCcccCchhhc----C-CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcC
Q 004954 567 LGSSCFQTDN----LCLYVQSRSYRAPEVII----G-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLG 637 (722)
Q Consensus 567 FGls~~~~~~----~~~~~gt~~y~APE~l~----~-~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg 637 (722)
||.+...... ....+|||.|.+||++. + +.|+...|+||+||++|||+.|..||..++..+.+.+|+..-.
T Consensus 219 FGsClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~ 298 (1317)
T KOG0612|consen 219 FGSCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKE 298 (1317)
T ss_pred chhHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhh
Confidence 9987655422 33468999999999986 3 4689999999999999999999999999999999999873210
Q ss_pred CCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcC---HHHHHh
Q 004954 638 PIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPT---AREALD 714 (722)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpT---a~ElL~ 714 (722)
...+|.... .+++.++||.+++. +|+.|.. ++++-.
T Consensus 299 ---------------------------------~l~FP~~~~-------VSeeakdLI~~ll~-~~e~RLgrngiedik~ 337 (1317)
T KOG0612|consen 299 ---------------------------------SLSFPDETD-------VSEEAKDLIEALLC-DREVRLGRNGIEDIKN 337 (1317)
T ss_pred ---------------------------------hcCCCcccc-------cCHHHHHHHHHHhc-ChhhhcccccHHHHHh
Confidence 111221111 34678899998775 7888988 999999
Q ss_pred CCCCCC
Q 004954 715 HPWLQH 720 (722)
Q Consensus 715 HPwf~~ 720 (722)
||||..
T Consensus 338 HpFF~g 343 (1317)
T KOG0612|consen 338 HPFFEG 343 (1317)
T ss_pred CccccC
Confidence 999975
No 314
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=2.3e-33 Score=299.89 Aligned_cols=273 Identities=23% Similarity=0.292 Sum_probs=189.3
Q ss_pred CCCceEEEEECCCCcEEEEEEeecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEEEcccc-c
Q 004954 426 AFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRA-N 501 (722)
Q Consensus 426 ~fG~Vy~a~d~~tg~~vAvKil~~~---~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~iVmEy~~g-s 501 (722)
+++.||++++..+++.||||+++.. ......+.+|+.+++.++ |+||+++++++...+..+++|||+.+ +
T Consensus 12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~------h~~i~~~~~~~~~~~~~~~~~e~~~~~~ 85 (314)
T cd08216 12 DLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQ------HPNILPYVTSFIVDSELYVVSPLMAYGS 85 (314)
T ss_pred CCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcC------CcchhhhhheeecCCeEEEEEeccCCCC
Confidence 5566777777789999999998754 334466778888888774 68999999999999999999999985 5
Q ss_pred hHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCcccccCC-----
Q 004954 502 LYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDN----- 576 (722)
Q Consensus 502 Ll~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~~~----- 576 (722)
+.+++...... .+++..+..++.|++.||+|||+.+|+||||||+||+++. ++.++|+|||.+......
T Consensus 86 l~~~l~~~~~~----~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~--~~~~kl~d~~~~~~~~~~~~~~~ 159 (314)
T cd08216 86 CEDLLKTHFPE----GLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSG--DGKVVLSGLRYSVSMIKHGKRQR 159 (314)
T ss_pred HHHHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEec--CCceEEecCccceeecccccccc
Confidence 66665533221 2888999999999999999999999999999999999985 788999999987543211
Q ss_pred -----ccccccCCcccCchhhcC--CCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhh
Q 004954 577 -----LCLYVQSRSYRAPEVIIG--LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQE 649 (722)
Q Consensus 577 -----~~~~~gt~~y~APE~l~~--~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~~ 649 (722)
.....++..|+|||++.. ..++.++|+||+||++|+|++|..||........+.+.. .+..+.. +....
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~--~~~~~~~-~~~~~- 235 (314)
T cd08216 160 VVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKV--RGTVPCL-LDKST- 235 (314)
T ss_pred ccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH--hccCccc-cccCc-
Confidence 122356778999999876 358889999999999999999999998765443332211 1111100 00000
Q ss_pred hhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCCC
Q 004954 650 IYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 720 (722)
Q Consensus 650 ~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~~ 720 (722)
.... ..... .......................+..+.+||++||++||++|||+.++|+||||+.
T Consensus 236 ~~~~---~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~ 300 (314)
T cd08216 236 YPLY---EDSMS---QSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQ 300 (314)
T ss_pred hhhh---cCCcC---cccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhh
Confidence 0000 00000 00000000000000000011122356889999999999999999999999999975
No 315
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=4.7e-33 Score=292.50 Aligned_cols=246 Identities=22% Similarity=0.273 Sum_probs=190.2
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCc----EEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEE
Q 004954 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGV----DVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY 486 (722)
Q Consensus 413 ~~rY~i~~~LG~G~fG~Vy~a~d~~tg~----~vAvKil~~~~--~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~ 486 (722)
..+|+++++||+|+||+||+|++..+++ .||+|+++... .....+.+|..+++.+ .|+||+++++++.
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~------~~~~i~~~~~~~~ 79 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGV------GSPYVCRLLGICL 79 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhc------CCCCCceEEEEEc
Confidence 4689999999999999999999877776 48999986532 2334556677766655 4789999999987
Q ss_pred ecCeEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEE
Q 004954 487 HLEHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKII 565 (722)
Q Consensus 487 ~~~~l~iVmEy~~-gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~ 565 (722)
. ...+++|||++ |+|.+++.... ..+++..+..++.||+.||+|||+++|+||||||+|||++. ++.+||+
T Consensus 80 ~-~~~~l~~~~~~~g~l~~~l~~~~-----~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~--~~~~kL~ 151 (279)
T cd05109 80 T-STVQLVTQLMPYGCLLDYVRENK-----DRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKS--PNHVKIT 151 (279)
T ss_pred C-CCcEEEEEcCCCCCHHHHHhhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcC--CCcEEEC
Confidence 5 45778999997 57777765432 23889999999999999999999999999999999999985 6789999
Q ss_pred ecCCcccccCCccc-----cccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCC
Q 004954 566 DLGSSCFQTDNLCL-----YVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPI 639 (722)
Q Consensus 566 DFGls~~~~~~~~~-----~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~~i~~~lg~~ 639 (722)
|||++......... ..+++.|+|||.+.+..++.++|||||||++|||++ |..||.......+...+....
T Consensus 152 dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~--- 228 (279)
T cd05109 152 DFGLARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGE--- 228 (279)
T ss_pred CCCceeecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCC---
Confidence 99998765432221 233567999999999899999999999999999998 999997765444333221100
Q ss_pred cHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhC
Q 004954 640 DLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 715 (722)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~H 715 (722)
....+ ...+..+.++|.+||+.||++||++.+++..
T Consensus 229 -------------------------------~~~~~---------~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~ 264 (279)
T cd05109 229 -------------------------------RLPQP---------PICTIDVYMIMVKCWMIDSECRPRFRELVDE 264 (279)
T ss_pred -------------------------------cCCCC---------ccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 00000 1123568899999999999999999999853
No 316
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=3.2e-33 Score=330.38 Aligned_cols=252 Identities=23% Similarity=0.342 Sum_probs=194.1
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc----hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~----~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (722)
++|++.++||+|+||.||+|++..+|+.||||+++.. .....++.+|+++++.++ ||||+++++++...+
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~------HPNIVkl~~v~~d~~ 75 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLI------HPGIVPVYSICSDGD 75 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCC------CcCcCeEEEEEeeCC
Confidence 6899999999999999999999999999999998753 223456778888887775 789999999999999
Q ss_pred eEEEEEEcccc-chHHHHhhhhcc-----CCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEE
Q 004954 490 HLFIVCELLRA-NLYEFQKFNQES-----GGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIK 563 (722)
Q Consensus 490 ~l~iVmEy~~g-sLl~~l~~~~~~-----~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vk 563 (722)
..++||||++| +|.+++...... .....++...+..++.||+.||+|||+.||+||||||+|||++. ++.++
T Consensus 76 ~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~--dg~vK 153 (932)
T PRK13184 76 PVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGL--FGEVV 153 (932)
T ss_pred EEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcC--CCCEE
Confidence 99999999985 666666432110 11123567788899999999999999999999999999999986 78899
Q ss_pred EEecCCcccccCC---------------------ccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 004954 564 IIDLGSSCFQTDN---------------------LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPN 622 (722)
Q Consensus 564 L~DFGls~~~~~~---------------------~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~ 622 (722)
|+|||++...... ....+||+.|+|||++.+..++.++|||||||++|+|++|..||..
T Consensus 154 LiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~ 233 (932)
T PRK13184 154 ILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRR 233 (932)
T ss_pred EEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCC
Confidence 9999998654110 1124689999999999999999999999999999999999999976
Q ss_pred ChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccC
Q 004954 623 DAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEIN 702 (722)
Q Consensus 623 ~~~~e~l~~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~d 702 (722)
........... .. .+ ....| ....++.+.+++.+||+.|
T Consensus 234 ~~~~ki~~~~~--i~-~P------------------------------~~~~p--------~~~iP~~L~~LI~rcL~~D 272 (932)
T PRK13184 234 KKGRKISYRDV--IL-SP------------------------------IEVAP--------YREIPPFLSQIAMKALAVD 272 (932)
T ss_pred cchhhhhhhhh--cc-Ch------------------------------hhccc--------cccCCHHHHHHHHHHccCC
Confidence 43322211100 00 00 00000 0123456889999999999
Q ss_pred CCCCcCHHHHHh
Q 004954 703 PQRRPTAREALD 714 (722)
Q Consensus 703 P~kRpTa~ElL~ 714 (722)
|++|++..+.|.
T Consensus 273 P~kR~ss~eeLl 284 (932)
T PRK13184 273 PAERYSSVQELK 284 (932)
T ss_pred hhhCcCHHHHHH
Confidence 999987666553
No 317
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=6e-33 Score=297.61 Aligned_cols=253 Identities=23% Similarity=0.349 Sum_probs=197.7
Q ss_pred ecCcEEEEEEeccCCCCceEEEEECC-------CCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEE
Q 004954 412 IAGRYYVTEYLGSAAFSKVFQAQDLH-------TGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLY 482 (722)
Q Consensus 412 l~~rY~i~~~LG~G~fG~Vy~a~d~~-------tg~~vAvKil~~~~--~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~ 482 (722)
-.++|.+.++||+|+||.||++++.. ....+|+|+++... .....+.+|+.+++.+. .||||++++
T Consensus 10 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~-----~h~~iv~~~ 84 (314)
T cd05099 10 PRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIG-----KHKNIINLL 84 (314)
T ss_pred cHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhcc-----CCCCeeeEE
Confidence 35789999999999999999998632 34579999987532 33456677888887774 378999999
Q ss_pred EEEEecCeEEEEEEccc-cchHHHHhhhhc----------cCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCc
Q 004954 483 DYFYHLEHLFIVCELLR-ANLYEFQKFNQE----------SGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPEN 551 (722)
Q Consensus 483 ~~f~~~~~l~iVmEy~~-gsLl~~l~~~~~----------~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~N 551 (722)
+++......++||||+. ++|.+++..... ......+++..+..++.||+.||.|||++||+||||||+|
T Consensus 85 ~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~N 164 (314)
T cd05099 85 GVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARN 164 (314)
T ss_pred EEEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecccccee
Confidence 99999999999999997 467777754321 1122348889999999999999999999999999999999
Q ss_pred eEEcccCCCeEEEEecCCcccccCCc-----cccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChH
Q 004954 552 ILIKSYQRCEIKIIDLGSSCFQTDNL-----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAV 625 (722)
Q Consensus 552 ILl~~~~~~~vkL~DFGls~~~~~~~-----~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~ 625 (722)
||++. ++.+||+|||++....... ....++..|+|||++.+..++.++|||||||++|+|++ |..||.+.+.
T Consensus 165 ill~~--~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~ 242 (314)
T cd05099 165 VLVTE--DNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPV 242 (314)
T ss_pred EEEcC--CCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCH
Confidence 99985 7789999999987543321 11223467999999999889999999999999999999 8999988766
Q ss_pred HHHHHHHHhhcCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCC
Q 004954 626 VMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQR 705 (722)
Q Consensus 626 ~e~l~~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~k 705 (722)
.+....+.... ....+ ...+..+.+||.+||..||.+
T Consensus 243 ~~~~~~~~~~~----------------------------------~~~~~---------~~~~~~l~~li~~cl~~~p~~ 279 (314)
T cd05099 243 EELFKLLREGH----------------------------------RMDKP---------SNCTHELYMLMRECWHAVPTQ 279 (314)
T ss_pred HHHHHHHHcCC----------------------------------CCCCC---------CCCCHHHHHHHHHHcCCCccc
Confidence 65554432100 00001 112356889999999999999
Q ss_pred CcCHHHHHh
Q 004954 706 RPTAREALD 714 (722)
Q Consensus 706 RpTa~ElL~ 714 (722)
|||+.++++
T Consensus 280 Rps~~~ll~ 288 (314)
T cd05099 280 RPTFKQLVE 288 (314)
T ss_pred CcCHHHHHH
Confidence 999999986
No 318
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=3.8e-33 Score=297.88 Aligned_cols=251 Identities=23% Similarity=0.355 Sum_probs=196.6
Q ss_pred eecCcEEEEEEeccCCCCceEEEEE-----CCCCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEE
Q 004954 411 VIAGRYYVTEYLGSAAFSKVFQAQD-----LHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYD 483 (722)
Q Consensus 411 ~l~~rY~i~~~LG~G~fG~Vy~a~d-----~~tg~~vAvKil~~~~--~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~ 483 (722)
...++|.+.+.||+|+||.||++.+ ..++..+|+|+++... .....+.+|+.+++++. .|+||+++++
T Consensus 32 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-----~h~~iv~~~~ 106 (302)
T cd05055 32 FPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLG-----NHENIVNLLG 106 (302)
T ss_pred ccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhcc-----CCCCcceEEE
Confidence 4457899999999999999999975 3356689999987542 33456778899888873 3789999999
Q ss_pred EEEecCeEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeE
Q 004954 484 YFYHLEHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI 562 (722)
Q Consensus 484 ~f~~~~~l~iVmEy~~-gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~v 562 (722)
.+...+..++||||+. ++|.+++..... ..+++.++..++.||+.||+|||+++|+|+||||+|||++. ++.+
T Consensus 107 ~~~~~~~~~lv~e~~~~~~L~~~i~~~~~----~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~--~~~~ 180 (302)
T cd05055 107 ACTIGGPILVITEYCCYGDLLNFLRRKRE----SFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTH--GKIV 180 (302)
T ss_pred EEecCCceEEEEEcCCCCcHHHHHHhCCC----CCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcC--CCeE
Confidence 9999999999999997 567776653221 23889999999999999999999999999999999999985 7789
Q ss_pred EEEecCCcccccCCcc-----ccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhc
Q 004954 563 KIIDLGSSCFQTDNLC-----LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGML 636 (722)
Q Consensus 563 kL~DFGls~~~~~~~~-----~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~~i~~~l 636 (722)
+|+|||++........ ...+++.|+|||.+.+..++.++|||||||++|+|++ |..||......+.+.++...
T Consensus 181 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~- 259 (302)
T cd05055 181 KICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKE- 259 (302)
T ss_pred EECCCcccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHc-
Confidence 9999999875433221 1234678999999999899999999999999999998 99999775543333222100
Q ss_pred CCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHh
Q 004954 637 GPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 714 (722)
Q Consensus 637 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~ 714 (722)
......+ ...+..+.+||.+||..+|++|||+.|+++
T Consensus 260 --------------------------------~~~~~~~---------~~~~~~~~~li~~cl~~~p~~Rpt~~ell~ 296 (302)
T cd05055 260 --------------------------------GYRMAQP---------EHAPAEIYDIMKTCWDADPLKRPTFKQIVQ 296 (302)
T ss_pred --------------------------------CCcCCCC---------CCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 0000000 112456899999999999999999999986
No 319
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=4.2e-33 Score=301.62 Aligned_cols=256 Identities=23% Similarity=0.336 Sum_probs=199.5
Q ss_pred ceecCcEEEEEEeccCCCCceEEEEECCC-------CcEEEEEEeecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeE
Q 004954 410 TVIAGRYYVTEYLGSAAFSKVFQAQDLHT-------GVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILR 480 (722)
Q Consensus 410 ~~l~~rY~i~~~LG~G~fG~Vy~a~d~~t-------g~~vAvKil~~~--~~~~~~~~~E~~il~~L~~~~~~~hpnIv~ 480 (722)
++...+|++.+.||+|+||.||++++... +..+|+|+++.. ......+.+|+.+++.+. .|+||++
T Consensus 8 ~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~-----~h~~iv~ 82 (334)
T cd05100 8 ELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIG-----KHKNIIN 82 (334)
T ss_pred ccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhc-----CCCCeee
Confidence 34456899999999999999999986432 246899988753 233456778888888874 3689999
Q ss_pred EEEEEEecCeEEEEEEcccc-chHHHHhhhhcc----------CCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCC
Q 004954 481 LYDYFYHLEHLFIVCELLRA-NLYEFQKFNQES----------GGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKP 549 (722)
Q Consensus 481 l~~~f~~~~~l~iVmEy~~g-sLl~~l~~~~~~----------~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp 549 (722)
+++++...+.+++||||+.+ +|.+++...... .....++...+..++.||+.||.|||++||+||||||
T Consensus 83 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp 162 (334)
T cd05100 83 LLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAA 162 (334)
T ss_pred eeEEEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeecccccc
Confidence 99999999999999999975 777777643211 1233478889999999999999999999999999999
Q ss_pred CceEEcccCCCeEEEEecCCcccccCCc-----cccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCC
Q 004954 550 ENILIKSYQRCEIKIIDLGSSCFQTDNL-----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPND 623 (722)
Q Consensus 550 ~NILl~~~~~~~vkL~DFGls~~~~~~~-----~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~ 623 (722)
+|||++. ++.+||+|||++....... ....++..|+|||++.+..++.++|||||||++|+|++ |..||.+.
T Consensus 163 ~Nill~~--~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~ 240 (334)
T cd05100 163 RNVLVTE--DNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGI 240 (334)
T ss_pred ceEEEcC--CCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCC
Confidence 9999985 7889999999987544321 11223467999999999999999999999999999998 89999887
Q ss_pred hHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCC
Q 004954 624 AVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINP 703 (722)
Q Consensus 624 ~~~e~l~~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP 703 (722)
+..+....+.... ....+ ...+..+.+||.+||+.+|
T Consensus 241 ~~~~~~~~~~~~~----------------------------------~~~~~---------~~~~~~l~~li~~cl~~~p 277 (334)
T cd05100 241 PVEELFKLLKEGH----------------------------------RMDKP---------ANCTHELYMIMRECWHAVP 277 (334)
T ss_pred CHHHHHHHHHcCC----------------------------------CCCCC---------CCCCHHHHHHHHHHcccCh
Confidence 6655544432100 00011 1123568899999999999
Q ss_pred CCCcCHHHHHhC
Q 004954 704 QRRPTAREALDH 715 (722)
Q Consensus 704 ~kRpTa~ElL~H 715 (722)
.+|||+.|+|++
T Consensus 278 ~~Rps~~ell~~ 289 (334)
T cd05100 278 SQRPTFKQLVED 289 (334)
T ss_pred hhCcCHHHHHHH
Confidence 999999999976
No 320
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-34 Score=306.56 Aligned_cols=253 Identities=26% Similarity=0.346 Sum_probs=208.4
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc----hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec
Q 004954 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 488 (722)
Q Consensus 413 ~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~----~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~ 488 (722)
.+.|+.-++||+||||.||-++...||+-+|+|.+.+. +......++|..||.+++. +.||.+-.+|++.
T Consensus 184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s------~FiVslaYAfeTk 257 (591)
T KOG0986|consen 184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSS------PFIVSLAYAFETK 257 (591)
T ss_pred ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhcc------CcEEEEeeeecCC
Confidence 45688889999999999999999999999999987432 2234567889999999975 4899999999999
Q ss_pred CeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecC
Q 004954 489 EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (722)
Q Consensus 489 ~~l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFG 568 (722)
+.+|+||..|+|+-+.+...+... ..|++.+++.++.+|+.||++||..+||+|||||+|||++. .|.|+|+|+|
T Consensus 258 d~LClVLtlMNGGDLkfHiyn~g~---~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd--~GhvRISDLG 332 (591)
T KOG0986|consen 258 DALCLVLTLMNGGDLKFHIYNHGN---PGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDD--HGHVRISDLG 332 (591)
T ss_pred CceEEEEEeecCCceeEEeeccCC---CCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeecc--CCCeEeeccc
Confidence 999999999998877766655432 34999999999999999999999999999999999999995 8999999999
Q ss_pred CcccccC--CccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHH----HHHHHHHhhcCCCcHH
Q 004954 569 SSCFQTD--NLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVV----MILARIIGMLGPIDLE 642 (722)
Q Consensus 569 ls~~~~~--~~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~----e~l~~i~~~lg~~~~~ 642 (722)
+|..... +....+||.+|||||++.+..|+...|+|||||++|||+.|+.||...... ++-.++.
T Consensus 333 LAvei~~g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~--------- 403 (591)
T KOG0986|consen 333 LAVEIPEGKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTL--------- 403 (591)
T ss_pred eEEecCCCCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHh---------
Confidence 9976544 345569999999999999999999999999999999999999999542111 1111111
Q ss_pred HHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCc-----CHHHHHhCCC
Q 004954 643 MLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRP-----TAREALDHPW 717 (722)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRp-----Ta~ElL~HPw 717 (722)
......| ...++++++|.+.+|+.||.+|. .++++-+|||
T Consensus 404 --------------------------~~~~ey~---------~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~Hpf 448 (591)
T KOG0986|consen 404 --------------------------EDPEEYS---------DKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPF 448 (591)
T ss_pred --------------------------cchhhcc---------cccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCcc
Confidence 0111111 22347789999999999999997 5889999999
Q ss_pred CCC
Q 004954 718 LQH 720 (722)
Q Consensus 718 f~~ 720 (722)
|+.
T Consensus 449 Fk~ 451 (591)
T KOG0986|consen 449 FKD 451 (591)
T ss_pred ccc
Confidence 975
No 321
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=4.8e-33 Score=289.44 Aligned_cols=248 Identities=22% Similarity=0.319 Sum_probs=197.2
Q ss_pred ceecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 004954 410 TVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (722)
Q Consensus 410 ~~l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (722)
++..++|++.+.||+|+||.||++.+. .+..+|+|.+.......+.+.+|+.+++.++ |+||+++++.+.. .
T Consensus 2 ~~~~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~-~ 73 (260)
T cd05073 2 EIPRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSMSVEAFLAEANVMKTLQ------HDKLVKLHAVVTK-E 73 (260)
T ss_pred cccccceeEEeEecCccceEEEEEEec-CCccEEEEecCCChhHHHHHHHHHHHHHhcC------CCCcceEEEEEcC-C
Confidence 456789999999999999999999854 5567999998876555567788988888775 6799999999887 7
Q ss_pred eEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecC
Q 004954 490 HLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (722)
Q Consensus 490 ~l~iVmEy~~-gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFG 568 (722)
..++||||+. ++|.+++.... ...+++..+..++.||+.||.|||+.|++|+||||+||+++. .+.++|+|||
T Consensus 74 ~~~~v~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~--~~~~~l~d~~ 147 (260)
T cd05073 74 PIYIITEFMAKGSLLDFLKSDE----GSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSA--SLVCKIADFG 147 (260)
T ss_pred CeEEEEEeCCCCcHHHHHHhCC----ccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcC--CCcEEECCCc
Confidence 8899999997 57877775432 223788889999999999999999999999999999999985 7899999999
Q ss_pred CcccccCCcc----ccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHHH
Q 004954 569 SSCFQTDNLC----LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEM 643 (722)
Q Consensus 569 ls~~~~~~~~----~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~~i~~~lg~~~~~~ 643 (722)
.+........ ...++..|+|||++.+..++.++|+|||||++|+|++ |..||.+.+.......+....
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~------- 220 (260)
T cd05073 148 LARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGY------- 220 (260)
T ss_pred ceeeccCCCcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCC-------
Confidence 8865443211 1234567999999998889999999999999999999 999998766554443332100
Q ss_pred HhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHh
Q 004954 644 LMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 714 (722)
Q Consensus 644 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~ 714 (722)
..+. ....+..+.+++.+||+.+|++||++.++++
T Consensus 221 -----------------------------~~~~-------~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05073 221 -----------------------------RMPR-------PENCPEELYNIMMRCWKNRPEERPTFEYIQS 255 (260)
T ss_pred -----------------------------CCCC-------cccCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 0000 0122456889999999999999999999874
No 322
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=1.9e-33 Score=293.43 Aligned_cols=243 Identities=28% Similarity=0.422 Sum_probs=190.4
Q ss_pred EEEEEeccCCCCceEEEEEC----CCCcEEEEEEeecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCe
Q 004954 417 YVTEYLGSAAFSKVFQAQDL----HTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 490 (722)
Q Consensus 417 ~i~~~LG~G~fG~Vy~a~d~----~tg~~vAvKil~~~--~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~ 490 (722)
.+.+.||.|.||.||+|.+. ..+..|+||+++.. ....+.+.+|+++++.++ ||||+++++++...+.
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~------h~ni~~~~g~~~~~~~ 75 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLR------HPNIVKLYGFCIENEP 75 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHS------BTTBE-EEEEEESSSS
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccc------cccccccccccccccc
Confidence 56789999999999999986 45788999999653 233577888888888774 6799999999998888
Q ss_pred EEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCC
Q 004954 491 LFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS 569 (722)
Q Consensus 491 l~iVmEy~~-gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGl 569 (722)
.++||||+. |+|.+++.... ...+++..++.|+.||+.||.|||+.+++|++|+++||+++. ++.+||+|||+
T Consensus 76 ~~lv~e~~~~g~L~~~L~~~~----~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~--~~~~Kl~~f~~ 149 (259)
T PF07714_consen 76 LFLVMEYCPGGSLDDYLKSKN----KEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDS--NGQVKLSDFGL 149 (259)
T ss_dssp EEEEEE--TTEBHHHHHHHTC----TTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEET--TTEEEEESTTT
T ss_pred ccccccccccccccccccccc----cccccccccccccccccccccccccccccccccccccccccc--ccccccccccc
Confidence 999999997 67888887651 122899999999999999999999999999999999999996 78999999999
Q ss_pred cccccCCc-----cccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHHH
Q 004954 570 SCFQTDNL-----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEM 643 (722)
Q Consensus 570 s~~~~~~~-----~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~~i~~~lg~~~~~~ 643 (722)
+....... ........|+|||.+.+..++.++||||||+++|||++ |+.||...+..++...+....
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~------- 222 (259)
T PF07714_consen 150 SRPISEKSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQ------- 222 (259)
T ss_dssp GEETTTSSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTE-------
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-------
Confidence 87663221 12345678999999998889999999999999999999 789998877766665553110
Q ss_pred HhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHh
Q 004954 644 LMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 714 (722)
Q Consensus 644 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~ 714 (722)
...++ ...+..+.++|..||..||.+|||+.++++
T Consensus 223 ---------------------------~~~~~---------~~~~~~~~~li~~C~~~~p~~RPs~~~i~~ 257 (259)
T PF07714_consen 223 ---------------------------RLPIP---------DNCPKDIYSLIQQCWSHDPEKRPSFQEILQ 257 (259)
T ss_dssp ---------------------------ETTSB---------TTSBHHHHHHHHHHT-SSGGGS--HHHHHH
T ss_pred ---------------------------cceec---------cchhHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 00011 123466889999999999999999999985
No 323
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.5e-33 Score=296.65 Aligned_cols=251 Identities=20% Similarity=0.250 Sum_probs=194.4
Q ss_pred CcEEEEEEeccCCCCceEEEEECCC-----CcEEEEEEeecchh--hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEE
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHT-----GVDVCLKIIKNDKD--FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY 486 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~t-----g~~vAvKil~~~~~--~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~ 486 (722)
.+|++.+.||.|+||.||+|.+..+ ++.||||+++.... ....+.+|..++..+ .||||+++++++.
T Consensus 5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l------~h~~iv~~~~~~~ 78 (283)
T cd05091 5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRL------QHPNIVCLLGVVT 78 (283)
T ss_pred HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcC------CCCCcCeEEEEEc
Confidence 4578889999999999999987543 57899999875432 234455666666655 4789999999999
Q ss_pred ecCeEEEEEEcccc-chHHHHhhhhc----------cCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEc
Q 004954 487 HLEHLFIVCELLRA-NLYEFQKFNQE----------SGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIK 555 (722)
Q Consensus 487 ~~~~l~iVmEy~~g-sLl~~l~~~~~----------~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~ 555 (722)
.....++++||+.+ +|.+++..... ......+++..++.++.|++.||.|||+.||+||||||+||+++
T Consensus 79 ~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~ 158 (283)
T cd05091 79 KEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVF 158 (283)
T ss_pred CCCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEec
Confidence 99999999999974 56666542211 01123478888999999999999999999999999999999998
Q ss_pred ccCCCeEEEEecCCcccccCCc-----cccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHH
Q 004954 556 SYQRCEIKIIDLGSSCFQTDNL-----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMIL 629 (722)
Q Consensus 556 ~~~~~~vkL~DFGls~~~~~~~-----~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l 629 (722)
. ++.+||+|||++....... ....+++.|+|||.+.+..++.++|||||||++|||++ |..||.+....+.+
T Consensus 159 ~--~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~ 236 (283)
T cd05091 159 D--KLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVI 236 (283)
T ss_pred C--CCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHH
Confidence 5 7789999999876543221 12344678999999988889999999999999999998 89999887666655
Q ss_pred HHHHhhcCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCH
Q 004954 630 ARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTA 709 (722)
Q Consensus 630 ~~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa 709 (722)
..+..... ...+ ...+..+.+|+.+||+.+|.+||++
T Consensus 237 ~~i~~~~~----------------------------------~~~~---------~~~~~~~~~li~~cl~~~p~~RP~~ 273 (283)
T cd05091 237 EMIRNRQV----------------------------------LPCP---------DDCPAWVYTLMLECWNEFPSRRPRF 273 (283)
T ss_pred HHHHcCCc----------------------------------CCCC---------CCCCHHHHHHHHHHhCCCcccCCCH
Confidence 55431100 0001 1234668899999999999999999
Q ss_pred HHHHhC
Q 004954 710 REALDH 715 (722)
Q Consensus 710 ~ElL~H 715 (722)
+++++.
T Consensus 274 ~~i~~~ 279 (283)
T cd05091 274 KDIHSR 279 (283)
T ss_pred HHHHHH
Confidence 999964
No 324
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=5.8e-33 Score=295.96 Aligned_cols=256 Identities=23% Similarity=0.358 Sum_probs=200.6
Q ss_pred ceecCcEEEEEEeccCCCCceEEEEEC-------CCCcEEEEEEeecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeE
Q 004954 410 TVIAGRYYVTEYLGSAAFSKVFQAQDL-------HTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILR 480 (722)
Q Consensus 410 ~~l~~rY~i~~~LG~G~fG~Vy~a~d~-------~tg~~vAvKil~~~--~~~~~~~~~E~~il~~L~~~~~~~hpnIv~ 480 (722)
.+..++|.+.+.||+|+||.||++++. ..+..+|+|.+... ......+.+|+.+++.+. .||||++
T Consensus 11 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~-----~h~~i~~ 85 (304)
T cd05101 11 EFSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG-----KHKNIIN 85 (304)
T ss_pred cccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhc-----cCCCchh
Confidence 355678999999999999999999752 23457999998653 233456778888888774 3789999
Q ss_pred EEEEEEecCeEEEEEEcccc-chHHHHhhhhccC----------CCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCC
Q 004954 481 LYDYFYHLEHLFIVCELLRA-NLYEFQKFNQESG----------GEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKP 549 (722)
Q Consensus 481 l~~~f~~~~~l~iVmEy~~g-sLl~~l~~~~~~~----------~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp 549 (722)
+++++......++||||+.+ +|.+++....... ....+++..+..++.||+.||.|||+.||+||||||
T Consensus 86 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp 165 (304)
T cd05101 86 LLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAA 165 (304)
T ss_pred eeEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeeccccc
Confidence 99999999999999999975 7777776432211 123478888999999999999999999999999999
Q ss_pred CceEEcccCCCeEEEEecCCcccccCCc-----cccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCC
Q 004954 550 ENILIKSYQRCEIKIIDLGSSCFQTDNL-----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPND 623 (722)
Q Consensus 550 ~NILl~~~~~~~vkL~DFGls~~~~~~~-----~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~ 623 (722)
+||+++. ++.+||+|||++....... ....+++.|+|||++.+..++.++||||||+++|+|++ |..||.+.
T Consensus 166 ~Nili~~--~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~ 243 (304)
T cd05101 166 RNVLVTE--NNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 243 (304)
T ss_pred ceEEEcC--CCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccC
Confidence 9999985 7889999999987654321 11234577999999998889999999999999999998 89999877
Q ss_pred hHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCC
Q 004954 624 AVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINP 703 (722)
Q Consensus 624 ~~~e~l~~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP 703 (722)
+..++...+.... ....+ ...+..+.+||.+||+.+|
T Consensus 244 ~~~~~~~~~~~~~----------------------------------~~~~~---------~~~~~~~~~li~~cl~~~p 280 (304)
T cd05101 244 PVEELFKLLKEGH----------------------------------RMDKP---------ANCTNELYMMMRDCWHAIP 280 (304)
T ss_pred CHHHHHHHHHcCC----------------------------------cCCCC---------CCCCHHHHHHHHHHcccCh
Confidence 6665554432100 00001 1234668899999999999
Q ss_pred CCCcCHHHHHhC
Q 004954 704 QRRPTAREALDH 715 (722)
Q Consensus 704 ~kRpTa~ElL~H 715 (722)
.+|||+.|+|+.
T Consensus 281 ~~Rps~~e~l~~ 292 (304)
T cd05101 281 SHRPTFKQLVED 292 (304)
T ss_pred hhCCCHHHHHHH
Confidence 999999999864
No 325
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=6e-33 Score=293.61 Aligned_cols=249 Identities=24% Similarity=0.350 Sum_probs=193.4
Q ss_pred cEEEEEEeccCCCCceEEEEECC-----CCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 004954 415 RYYVTEYLGSAAFSKVFQAQDLH-----TGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 487 (722)
Q Consensus 415 rY~i~~~LG~G~fG~Vy~a~d~~-----tg~~vAvKil~~~~--~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~ 487 (722)
+|++.+.||+|+||.||+|.+.. ....+++|.+.... ....++.+|+.+++.++ ||||+++++.+..
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~~ 74 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVN------HPHVIKLYGACSQ 74 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCC------CCCEeeEEEEEec
Confidence 47889999999999999998743 23568999887543 23456777888887774 7899999999999
Q ss_pred cCeEEEEEEccc-cchHHHHhhhhcc------------------CCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCC
Q 004954 488 LEHLFIVCELLR-ANLYEFQKFNQES------------------GGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLK 548 (722)
Q Consensus 488 ~~~l~iVmEy~~-gsLl~~l~~~~~~------------------~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLK 548 (722)
.+..++||||+. ++|.+++...... .....+++..++.++.|++.||.|||+.+|+|||||
T Consensus 75 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dik 154 (290)
T cd05045 75 DGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLA 154 (290)
T ss_pred CCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhh
Confidence 999999999998 5676666532211 112348889999999999999999999999999999
Q ss_pred CCceEEcccCCCeEEEEecCCcccccCCc-----cccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCC
Q 004954 549 PENILIKSYQRCEIKIIDLGSSCFQTDNL-----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPN 622 (722)
Q Consensus 549 p~NILl~~~~~~~vkL~DFGls~~~~~~~-----~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~ 622 (722)
|+|||++. ++.+||+|||++....... ....++..|+|||.+.+..++.++||||||+++|+|++ |..||.+
T Consensus 155 p~nill~~--~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~ 232 (290)
T cd05045 155 ARNVLVAE--GRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPG 232 (290)
T ss_pred hheEEEcC--CCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCC
Confidence 99999985 7789999999986543221 12234678999999998889999999999999999998 9999987
Q ss_pred ChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccC
Q 004954 623 DAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEIN 702 (722)
Q Consensus 623 ~~~~e~l~~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~d 702 (722)
.....+...+... .....| ...+..+.+||.+||+.+
T Consensus 233 ~~~~~~~~~~~~~----------------------------------~~~~~~---------~~~~~~~~~~i~~cl~~~ 269 (290)
T cd05045 233 IAPERLFNLLKTG----------------------------------YRMERP---------ENCSEEMYNLMLTCWKQE 269 (290)
T ss_pred CCHHHHHHHHhCC----------------------------------CCCCCC---------CCCCHHHHHHHHHHccCC
Confidence 6655444332110 000011 123456889999999999
Q ss_pred CCCCcCHHHHHh
Q 004954 703 PQRRPTAREALD 714 (722)
Q Consensus 703 P~kRpTa~ElL~ 714 (722)
|.+||++.++++
T Consensus 270 P~~Rp~~~~i~~ 281 (290)
T cd05045 270 PDKRPTFADISK 281 (290)
T ss_pred cccCCCHHHHHH
Confidence 999999999985
No 326
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=8.2e-33 Score=288.45 Aligned_cols=246 Identities=21% Similarity=0.304 Sum_probs=193.0
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCc---EEEEEEeecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 004954 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGV---DVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 487 (722)
Q Consensus 413 ~~rY~i~~~LG~G~fG~Vy~a~d~~tg~---~vAvKil~~~--~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~ 487 (722)
.++|+..+.||+|+||.||+|.+..++. .+|+|.++.. ......+..|+++++.+. |+||+++++++..
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~ 77 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFS------HHNIIRLEGVVTK 77 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCC------CCCeeEEEEEEcc
Confidence 4678999999999999999999876654 7999988654 223455667777776664 7899999999999
Q ss_pred cCeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEe
Q 004954 488 LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIID 566 (722)
Q Consensus 488 ~~~l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~D 566 (722)
.+..++||||+++ +|.+++.... ..+++..+..++.|++.||.|||+.|++|+||||+||+++. ++.++|+|
T Consensus 78 ~~~~~lv~e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~--~~~~kl~d 150 (268)
T cd05063 78 FKPAMIITEYMENGALDKYLRDHD-----GEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNS--NLECKVSD 150 (268)
T ss_pred CCCcEEEEEcCCCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcC--CCcEEECC
Confidence 9999999999986 5555554321 23889999999999999999999999999999999999985 78899999
Q ss_pred cCCcccccCCccc------cccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCC
Q 004954 567 LGSSCFQTDNLCL------YVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPI 639 (722)
Q Consensus 567 FGls~~~~~~~~~------~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~~i~~~lg~~ 639 (722)
||++......... ...++.|+|||++.+..++.++|||||||++|+|++ |..||...+..+....+.....
T Consensus 151 fg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~~~-- 228 (268)
T cd05063 151 FGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGFR-- 228 (268)
T ss_pred CccceecccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcCCC--
Confidence 9998655332111 122456999999998889999999999999999998 9999977665555444431100
Q ss_pred cHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHh
Q 004954 640 DLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 714 (722)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~ 714 (722)
.|. ....+..+.+|+.+||+.+|.+||++.++++
T Consensus 229 ----------------------------------~~~-------~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~ 262 (268)
T cd05063 229 ----------------------------------LPA-------PMDCPSAVYQLMLQCWQQDRARRPRFVDIVN 262 (268)
T ss_pred ----------------------------------CCC-------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 000 0012356889999999999999999999986
No 327
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=4.7e-33 Score=293.85 Aligned_cols=251 Identities=20% Similarity=0.243 Sum_probs=196.3
Q ss_pred cCcEEEEEEeccCCCCceEEEEEC-----CCCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEE
Q 004954 413 AGRYYVTEYLGSAAFSKVFQAQDL-----HTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYF 485 (722)
Q Consensus 413 ~~rY~i~~~LG~G~fG~Vy~a~d~-----~tg~~vAvKil~~~~--~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f 485 (722)
.++|++.+.||+|+||.||++.+. .++..+|+|++.... .....+.+|+.+++.+. ||||+++++++
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~------h~~iv~~~~~~ 77 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFD------HPNIVKLLGVC 77 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcC------CCchheEEEEE
Confidence 367999999999999999999874 367899999987542 23455777888888774 78999999999
Q ss_pred EecCeEEEEEEcccc-chHHHHhhhhcc----------------CCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCC
Q 004954 486 YHLEHLFIVCELLRA-NLYEFQKFNQES----------------GGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLK 548 (722)
Q Consensus 486 ~~~~~l~iVmEy~~g-sLl~~l~~~~~~----------------~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLK 548 (722)
......++||||+.+ +|.+++...... .....+++..++.++.||+.||.|||+.+++|||||
T Consensus 78 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~ 157 (288)
T cd05050 78 AVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLA 157 (288)
T ss_pred cCCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeeccccc
Confidence 999999999999984 777777643211 112237888899999999999999999999999999
Q ss_pred CCceEEcccCCCeEEEEecCCcccccCC-----ccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCC
Q 004954 549 PENILIKSYQRCEIKIIDLGSSCFQTDN-----LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPN 622 (722)
Q Consensus 549 p~NILl~~~~~~~vkL~DFGls~~~~~~-----~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~ 622 (722)
|+||+++. ++.++|+|||++...... ......++.|+|||.+.+..++.++|||||||++|+|++ |..||.+
T Consensus 158 p~nil~~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~ 235 (288)
T cd05050 158 TRNCLVGE--NMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYG 235 (288)
T ss_pred HhheEecC--CCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Confidence 99999985 788999999988653322 112234667999999998899999999999999999998 8889977
Q ss_pred ChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccC
Q 004954 623 DAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEIN 702 (722)
Q Consensus 623 ~~~~e~l~~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~d 702 (722)
....+....+.... . ...| ...+..+.+||.+||+.+
T Consensus 236 ~~~~~~~~~~~~~~---------------------------------~-~~~~---------~~~~~~l~~li~~~l~~~ 272 (288)
T cd05050 236 MAHEEVIYYVRDGN---------------------------------V-LSCP---------DNCPLELYNLMRLCWSKL 272 (288)
T ss_pred CCHHHHHHHHhcCC---------------------------------C-CCCC---------CCCCHHHHHHHHHHcccC
Confidence 66555444332100 0 0001 112456889999999999
Q ss_pred CCCCcCHHHHHh
Q 004954 703 PQRRPTAREALD 714 (722)
Q Consensus 703 P~kRpTa~ElL~ 714 (722)
|.+|||+.|+++
T Consensus 273 p~~Rpt~~el~~ 284 (288)
T cd05050 273 PSDRPSFASINR 284 (288)
T ss_pred cccCCCHHHHHH
Confidence 999999999985
No 328
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=4.5e-33 Score=309.57 Aligned_cols=253 Identities=22% Similarity=0.305 Sum_probs=194.3
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCC-----CcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEE
Q 004954 413 AGRYYVTEYLGSAAFSKVFQAQDLHT-----GVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYF 485 (722)
Q Consensus 413 ~~rY~i~~~LG~G~fG~Vy~a~d~~t-----g~~vAvKil~~~~--~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f 485 (722)
.++|++.++||+|+||.||+|.+... +..||||+++... .....+.+|+.+++.+. .||||+++++++
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~-----~HpnIv~l~~~~ 110 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLG-----PHLNIVNLLGAC 110 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcC-----CCCCeeeEEEEE
Confidence 46899999999999999999987433 3579999997532 23456778999888885 378999999999
Q ss_pred EecCeEEEEEEccc-cchHHHHhhhhcc----------------------------------------------------
Q 004954 486 YHLEHLFIVCELLR-ANLYEFQKFNQES---------------------------------------------------- 512 (722)
Q Consensus 486 ~~~~~l~iVmEy~~-gsLl~~l~~~~~~---------------------------------------------------- 512 (722)
.....++|||||+. |+|.+++......
T Consensus 111 ~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (400)
T cd05105 111 TKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVP 190 (400)
T ss_pred ccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccch
Confidence 99999999999997 5677766543210
Q ss_pred --------------------------------------CCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEE
Q 004954 513 --------------------------------------GGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILI 554 (722)
Q Consensus 513 --------------------------------------~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl 554 (722)
.....+++..+..++.||+.||.|||+.+|+||||||+|||+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill 270 (400)
T cd05105 191 MLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLL 270 (400)
T ss_pred hhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEE
Confidence 001237788889999999999999999999999999999999
Q ss_pred cccCCCeEEEEecCCcccccCCc-----cccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHH
Q 004954 555 KSYQRCEIKIIDLGSSCFQTDNL-----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMI 628 (722)
Q Consensus 555 ~~~~~~~vkL~DFGls~~~~~~~-----~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~ 628 (722)
+. ++.+||+|||++....... ....+++.|+|||++.+..++.++|||||||++|+|++ |..||........
T Consensus 271 ~~--~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~ 348 (400)
T cd05105 271 AQ--GKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDST 348 (400)
T ss_pred eC--CCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHH
Confidence 86 7789999999987543221 12345678999999999899999999999999999997 9999976533222
Q ss_pred HHHHHhhcCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcC
Q 004954 629 LARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPT 708 (722)
Q Consensus 629 l~~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpT 708 (722)
+...+.. ......+ ...+..+.+||.+||+.||++|||
T Consensus 349 ~~~~~~~---------------------------------~~~~~~~---------~~~~~~l~~li~~cl~~dP~~RPt 386 (400)
T cd05105 349 FYNKIKS---------------------------------GYRMAKP---------DHATQEVYDIMVKCWNSEPEKRPS 386 (400)
T ss_pred HHHHHhc---------------------------------CCCCCCC---------ccCCHHHHHHHHHHCccCHhHCcC
Confidence 2111100 0000001 123456889999999999999999
Q ss_pred HHHHHh
Q 004954 709 AREALD 714 (722)
Q Consensus 709 a~ElL~ 714 (722)
+.++.+
T Consensus 387 ~~~l~~ 392 (400)
T cd05105 387 FLHLSD 392 (400)
T ss_pred HHHHHH
Confidence 999876
No 329
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=7.3e-33 Score=289.19 Aligned_cols=246 Identities=21% Similarity=0.282 Sum_probs=194.0
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCc---EEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 004954 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGV---DVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 487 (722)
Q Consensus 413 ~~rY~i~~~LG~G~fG~Vy~a~d~~tg~---~vAvKil~~~~--~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~ 487 (722)
..+|++.+.||+|+||.||+|+++.++. .+|+|.++... .....+.+|+.+++.++ ||||+++++++..
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~ 76 (267)
T cd05066 3 ASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFD------HPNIIHLEGVVTK 76 (267)
T ss_pred HHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCC------CCCcceEEEEEec
Confidence 3689999999999999999999865443 79999886532 23346677777777664 7899999999999
Q ss_pred cCeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEe
Q 004954 488 LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIID 566 (722)
Q Consensus 488 ~~~l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~D 566 (722)
.+..++||||+++ +|.+++.... ..+++.++..++.|++.||+|||+.|++||||||+|||++. ++.++|+|
T Consensus 77 ~~~~~lv~e~~~~~~L~~~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~--~~~~~l~d 149 (267)
T cd05066 77 SKPVMIVTEYMENGSLDAFLRKHD-----GQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNS--NLVCKVSD 149 (267)
T ss_pred CCccEEEEEcCCCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECC--CCeEEeCC
Confidence 9999999999975 5666665322 23788999999999999999999999999999999999985 78899999
Q ss_pred cCCcccccCCcc------ccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCC
Q 004954 567 LGSSCFQTDNLC------LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPI 639 (722)
Q Consensus 567 FGls~~~~~~~~------~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~~i~~~lg~~ 639 (722)
||++........ ....+..|+|||.+.+..++.++|+|||||++|++++ |..||......+....+.....
T Consensus 150 fg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~-- 227 (267)
T cd05066 150 FGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGYR-- 227 (267)
T ss_pred CCcccccccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCCc--
Confidence 999876543221 1122457999999998889999999999999999887 9999987665555444331100
Q ss_pred cHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHh
Q 004954 640 DLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 714 (722)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~ 714 (722)
.|. ....++.+.+++.+||+.+|.+||++.++++
T Consensus 228 ----------------------------------~~~-------~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 261 (267)
T cd05066 228 ----------------------------------LPA-------PMDCPAALHQLMLDCWQKDRNERPKFEQIVS 261 (267)
T ss_pred ----------------------------------CCC-------CCCCCHHHHHHHHHHcccCchhCCCHHHHHH
Confidence 010 0112456889999999999999999999985
No 330
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=5.8e-33 Score=287.52 Aligned_cols=243 Identities=24% Similarity=0.375 Sum_probs=194.0
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEE
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFI 493 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~i 493 (722)
++|++.+.||+|+||.||++. .+++.+|+|+++.... ...+.+|+.+++.++ ||||+++++++... ..++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~--~~~~~~~iK~~~~~~~-~~~~~~e~~~l~~~~------~~~i~~~~~~~~~~-~~~~ 75 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGE--YTGQKVAVKNIKCDVT-AQAFLEETAVMTKLH------HKNLVRLLGVILHN-GLYI 75 (254)
T ss_pred HHceeeeeeccCCCCceEecc--cCCCceEEEeecCcch-HHHHHHHHHHHHhCC------CCCcCeEEEEEcCC-CcEE
Confidence 579999999999999999986 5788999999876432 356778888887775 67999999998654 5799
Q ss_pred EEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCccc
Q 004954 494 VCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF 572 (722)
Q Consensus 494 VmEy~~-gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~ 572 (722)
||||+. ++|.+++..... ..+++..++.++.|++.||.|||+.|++||||||+||+++. ++.++|+|||++..
T Consensus 76 v~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~--~~~~kl~Dfg~~~~ 149 (254)
T cd05083 76 VMELMSKGNLVNFLRTRGR----ALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSE--DGVAKVSDFGLARV 149 (254)
T ss_pred EEECCCCCCHHHHHHhcCc----CCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcC--CCcEEECCCcccee
Confidence 999997 477777764322 23788999999999999999999999999999999999985 78899999999876
Q ss_pred ccCCccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhh
Q 004954 573 QTDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIY 651 (722)
Q Consensus 573 ~~~~~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~~~~ 651 (722)
..........+..|+|||.+.+..++.++|+|||||++|+|++ |+.||...+..+....+....
T Consensus 150 ~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~--------------- 214 (254)
T cd05083 150 GSMGVDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGY--------------- 214 (254)
T ss_pred ccccCCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCC---------------
Confidence 5443333445678999999998889999999999999999998 999998776555443332100
Q ss_pred hhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhC
Q 004954 652 KYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 715 (722)
Q Consensus 652 ~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~H 715 (722)
....+ ...+..+.+||++||+.+|.+||+++++++.
T Consensus 215 -------------------~~~~~---------~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 250 (254)
T cd05083 215 -------------------RMEPP---------EGCPADVYVLMTSCWETEPKKRPSFHKLREK 250 (254)
T ss_pred -------------------CCCCC---------CcCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 00000 1224668899999999999999999999863
No 331
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=7.8e-33 Score=293.11 Aligned_cols=250 Identities=23% Similarity=0.282 Sum_probs=195.4
Q ss_pred CcEEEEEEeccCCCCceEEEEEC-----CCCcEEEEEEeecchh-hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDL-----HTGVDVCLKIIKNDKD-FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 487 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~-----~tg~~vAvKil~~~~~-~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~ 487 (722)
.+|.+.+.||+|+||.||++++. .++..+++|.+..... ....+.+|+.+++.++ |+||+++++++..
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~ 78 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQ------HEHIVKFYGVCGD 78 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCC------CCCcceEEEEEcc
Confidence 56899999999999999999853 3456789998865432 2345667777777664 6899999999999
Q ss_pred cCeEEEEEEccc-cchHHHHhhhhcc----------CCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcc
Q 004954 488 LEHLFIVCELLR-ANLYEFQKFNQES----------GGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKS 556 (722)
Q Consensus 488 ~~~l~iVmEy~~-gsLl~~l~~~~~~----------~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~ 556 (722)
.+..++||||+. ++|.+++...... .....+++..++.++.||+.||+|||++||+||||||+||+++.
T Consensus 79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~ 158 (291)
T cd05094 79 GDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGA 158 (291)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEcc
Confidence 999999999997 5777776543210 11234889999999999999999999999999999999999996
Q ss_pred cCCCeEEEEecCCcccccCCc-----cccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHH
Q 004954 557 YQRCEIKIIDLGSSCFQTDNL-----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILA 630 (722)
Q Consensus 557 ~~~~~vkL~DFGls~~~~~~~-----~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~ 630 (722)
++.++|+|||++....... ....+++.|+|||.+.+..++.++|||||||++|+|++ |..||...+..+...
T Consensus 159 --~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~ 236 (291)
T cd05094 159 --NLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIE 236 (291)
T ss_pred --CCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence 7889999999986543321 22345778999999999999999999999999999999 999997766555443
Q ss_pred HHHhhcCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHH
Q 004954 631 RIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAR 710 (722)
Q Consensus 631 ~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ 710 (722)
.+..... +. .....+..+.+||.+||+.+|.+|||+.
T Consensus 237 ~~~~~~~-------------------------------------~~------~~~~~~~~~~~li~~~l~~~P~~Rpt~~ 273 (291)
T cd05094 237 CITQGRV-------------------------------------LE------RPRVCPKEVYDIMLGCWQREPQQRLNIK 273 (291)
T ss_pred HHhCCCC-------------------------------------CC------CCccCCHHHHHHHHHHcccChhhCcCHH
Confidence 3321000 00 0011245688999999999999999999
Q ss_pred HHHh
Q 004954 711 EALD 714 (722)
Q Consensus 711 ElL~ 714 (722)
++++
T Consensus 274 ~v~~ 277 (291)
T cd05094 274 EIYK 277 (291)
T ss_pred HHHH
Confidence 9985
No 332
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=5.8e-33 Score=290.03 Aligned_cols=246 Identities=21% Similarity=0.300 Sum_probs=193.9
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCc---EEEEEEeecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGV---DVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 488 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~---~vAvKil~~~--~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~ 488 (722)
+.|++.+.||+|+||.||+|.+..+++ .||||++... ......+..|+.+++.+. ||||+++++++...
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~------h~ni~~~~~~~~~~ 77 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFD------HPNIIHLEGVVTKS 77 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCC------CcCcceEEEEECCC
Confidence 568999999999999999999877665 5999998753 333456777888887764 78999999999999
Q ss_pred CeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEec
Q 004954 489 EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDL 567 (722)
Q Consensus 489 ~~l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DF 567 (722)
...++||||+.+ +|.+++.... ..+++..++.++.|++.||.|||++|++|+||||+||+++. ++.++|+||
T Consensus 78 ~~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~--~~~~kl~df 150 (269)
T cd05065 78 RPVMIITEFMENGALDSFLRQND-----GQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNS--NLVCKVSDF 150 (269)
T ss_pred CceEEEEecCCCCcHHHHHhhCC-----CCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcC--CCcEEECCC
Confidence 999999999986 5655554322 23889999999999999999999999999999999999985 778999999
Q ss_pred CCcccccCCccc-----cc---cCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCC
Q 004954 568 GSSCFQTDNLCL-----YV---QSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGP 638 (722)
Q Consensus 568 Gls~~~~~~~~~-----~~---gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~~i~~~lg~ 638 (722)
|++......... .. .+..|+|||.+.+..++.++|||||||++|||++ |..||...+..+....+.....
T Consensus 151 g~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~~~- 229 (269)
T cd05065 151 GLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQDYR- 229 (269)
T ss_pred ccccccccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCc-
Confidence 988654332111 11 1346999999999899999999999999999986 9999987665554444321100
Q ss_pred CcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhC
Q 004954 639 IDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 715 (722)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~H 715 (722)
.|.. ...+..+.+++.+||+.+|.+||++.++++.
T Consensus 230 -----------------------------------~~~~-------~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~ 264 (269)
T cd05065 230 -----------------------------------LPPP-------MDCPTALHQLMLDCWQKDRNARPKFGQIVST 264 (269)
T ss_pred -----------------------------------CCCc-------ccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 0000 1123568899999999999999999999863
No 333
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=7e-33 Score=326.70 Aligned_cols=144 Identities=27% Similarity=0.431 Sum_probs=123.9
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~----~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (722)
++|+++++||+|+||+||+|.+..+++.||||+++... .....+..|+.+++.++ |+||+++++++....
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~------hp~Iv~~~~~~~~~~ 77 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSK------SPFIVHLYYSLQSAN 77 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcC------CCCcCeEEEEEEECC
Confidence 68999999999999999999999999999999997532 22355667777777664 789999999999999
Q ss_pred eEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecC
Q 004954 490 HLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (722)
Q Consensus 490 ~l~iVmEy~~-gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFG 568 (722)
+++|||||+. ++|.+++.... .+++..++.|+.||+.||.|||+.+|+||||||+||||+. ++.+||+|||
T Consensus 78 ~~~lVmEy~~g~~L~~li~~~~------~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~--~g~vkL~DFG 149 (669)
T cd05610 78 NVYLVMEYLIGGDVKSLLHIYG------YFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISN--EGHIKLTDFG 149 (669)
T ss_pred EEEEEEeCCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcC--CCCEEEEeCC
Confidence 9999999996 46777665332 2788899999999999999999999999999999999985 7889999999
Q ss_pred Ccc
Q 004954 569 SSC 571 (722)
Q Consensus 569 ls~ 571 (722)
+++
T Consensus 150 ls~ 152 (669)
T cd05610 150 LSK 152 (669)
T ss_pred CCc
Confidence 764
No 334
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=7.4e-33 Score=287.50 Aligned_cols=237 Identities=22% Similarity=0.271 Sum_probs=185.8
Q ss_pred EeccCCCCceEEEEE--CCCCcEEEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEE
Q 004954 421 YLGSAAFSKVFQAQD--LHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVC 495 (722)
Q Consensus 421 ~LG~G~fG~Vy~a~d--~~tg~~vAvKil~~~~---~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~iVm 495 (722)
.||+|+||.||+|.+ +.++..+|+|+++... ...+.+.+|+.+++.+. |+||+++++++. .+..++||
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~-~~~~~lv~ 74 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLD------NPYIVRMIGICE-AESWMLVM 74 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCC------CCCcceEEEEEc-CCCcEEEE
Confidence 589999999999964 5678899999986542 23455677777777764 789999999875 45678999
Q ss_pred Ecccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCccccc
Q 004954 496 ELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT 574 (722)
Q Consensus 496 Ey~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~ 574 (722)
||+.+ .|.+++.... .+++..+..++.||+.||+|||++||+||||||.||+++. ++.+||+|||++....
T Consensus 75 e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~--~~~~kl~Dfg~~~~~~ 146 (257)
T cd05116 75 ELAELGPLNKFLQKNK------HVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVT--QHYAKISDFGLSKALG 146 (257)
T ss_pred ecCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcC--CCeEEECCCccccccC
Confidence 99985 5766664322 2889999999999999999999999999999999999996 7789999999987654
Q ss_pred CCcc------ccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 004954 575 DNLC------LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 647 (722)
Q Consensus 575 ~~~~------~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~ 647 (722)
.... ...+++.|+|||.+....++.++|||||||++|+|++ |..||......+....+....
T Consensus 147 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~----------- 215 (257)
T cd05116 147 ADENYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGE----------- 215 (257)
T ss_pred CCCCeeeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCC-----------
Confidence 3321 1233578999999988889999999999999999998 999998776655544432100
Q ss_pred hhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhC
Q 004954 648 QEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 715 (722)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~H 715 (722)
....| ...++.+.+||++||+.||++||++.+|.+.
T Consensus 216 -----------------------~~~~~---------~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~ 251 (257)
T cd05116 216 -----------------------RMECP---------QRCPPEMYDLMKLCWTYGVDERPGFAVVELR 251 (257)
T ss_pred -----------------------CCCCC---------CCCCHHHHHHHHHHhccCchhCcCHHHHHHH
Confidence 00111 1234678999999999999999999998753
No 335
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=4.6e-33 Score=295.43 Aligned_cols=258 Identities=21% Similarity=0.264 Sum_probs=194.9
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCC--------------cEEEEEEeecc--hhhhHhHHHHHHHHHHhcccCCCCCC
Q 004954 413 AGRYYVTEYLGSAAFSKVFQAQDLHTG--------------VDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEH 476 (722)
Q Consensus 413 ~~rY~i~~~LG~G~fG~Vy~a~d~~tg--------------~~vAvKil~~~--~~~~~~~~~E~~il~~L~~~~~~~hp 476 (722)
.++|++.+.||+|+||.||++++..++ ..||+|+++.. ......+.+|+++++.++ |+
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~------h~ 77 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLK------NP 77 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCC------CC
Confidence 368999999999999999999875432 35899998753 233456778888888775 67
Q ss_pred ceeEEEEEEEecCeEEEEEEcccc-chHHHHhhhhcc------CCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCC
Q 004954 477 HILRLYDYFYHLEHLFIVCELLRA-NLYEFQKFNQES------GGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKP 549 (722)
Q Consensus 477 nIv~l~~~f~~~~~l~iVmEy~~g-sLl~~l~~~~~~------~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp 549 (722)
||+++++++......++||||+.+ +|.+++...... .....+++..+..++.|++.||+|||+.|++|+||||
T Consensus 78 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp 157 (295)
T cd05097 78 NIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLAT 157 (295)
T ss_pred CcCeEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccCh
Confidence 999999999999999999999985 676666432210 0112367888999999999999999999999999999
Q ss_pred CceEEcccCCCeEEEEecCCcccccCCc-----cccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh--CCCCCCC
Q 004954 550 ENILIKSYQRCEIKIIDLGSSCFQTDNL-----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT--GEVLFPN 622 (722)
Q Consensus 550 ~NILl~~~~~~~vkL~DFGls~~~~~~~-----~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt--G~~PF~~ 622 (722)
+||+++. ++.+||+|||++....... ....+++.|+|||++.+..++.++|||||||++|+|++ |..||..
T Consensus 158 ~Nill~~--~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~ 235 (295)
T cd05097 158 RNCLVGN--HYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSL 235 (295)
T ss_pred hhEEEcC--CCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcc
Confidence 9999985 7789999999986543221 11234678999999998889999999999999999988 7788887
Q ss_pred ChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccC
Q 004954 623 DAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEIN 702 (722)
Q Consensus 623 ~~~~e~l~~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~d 702 (722)
.+..+.+..+........ ...... .....+..+.+||++||+.|
T Consensus 236 ~~~~~~~~~~~~~~~~~~---------------------------~~~~~~---------~~~~~~~~l~~li~~~l~~~ 279 (295)
T cd05097 236 LSDEQVIENTGEFFRNQG---------------------------RQIYLS---------QTPLCPSPVFKLMMRCWSRD 279 (295)
T ss_pred cChHHHHHHHHHhhhhcc---------------------------ccccCC---------CCCCCCHHHHHHHHHHcCCC
Confidence 666555544332110000 000000 01123467899999999999
Q ss_pred CCCCcCHHHHHh
Q 004954 703 PQRRPTAREALD 714 (722)
Q Consensus 703 P~kRpTa~ElL~ 714 (722)
|.+|||+.++++
T Consensus 280 p~~RPs~~~i~~ 291 (295)
T cd05097 280 IKDRPTFNKIHH 291 (295)
T ss_pred chhCcCHHHHHH
Confidence 999999999975
No 336
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=3.2e-33 Score=304.10 Aligned_cols=255 Identities=23% Similarity=0.323 Sum_probs=193.7
Q ss_pred ecCcEEEEEEeccCCCCceEEEEE-----CCCCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEE
Q 004954 412 IAGRYYVTEYLGSAAFSKVFQAQD-----LHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDY 484 (722)
Q Consensus 412 l~~rY~i~~~LG~G~fG~Vy~a~d-----~~tg~~vAvKil~~~~--~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~ 484 (722)
-.++|++.+.||+|+||.||+|.+ ..+++.||||+++... .....+.+|+.++..+.+ ||||++++++
T Consensus 5 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~-----h~niv~~~~~ 79 (343)
T cd05103 5 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH-----HLNVVNLLGA 79 (343)
T ss_pred chhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccC-----CccHhhhcce
Confidence 357899999999999999999984 3567899999997532 334567789999988853 6899999998
Q ss_pred EEec-CeEEEEEEcccc-chHHHHhhhhcc--------------------------------------------------
Q 004954 485 FYHL-EHLFIVCELLRA-NLYEFQKFNQES-------------------------------------------------- 512 (722)
Q Consensus 485 f~~~-~~l~iVmEy~~g-sLl~~l~~~~~~-------------------------------------------------- 512 (722)
+... ...++||||+.+ +|.+++......
T Consensus 80 ~~~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (343)
T cd05103 80 CTKPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLS 159 (343)
T ss_pred eecCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccc
Confidence 8654 568999999974 677766532110
Q ss_pred -----------CCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCcccccCCc----
Q 004954 513 -----------GGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNL---- 577 (722)
Q Consensus 513 -----------~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~~~~---- 577 (722)
.....+++..+..++.||+.||+|||+.||+||||||+|||++. ++.+||+|||++.......
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~--~~~~kl~dfg~~~~~~~~~~~~~ 237 (343)
T cd05103 160 DVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSE--NNVVKICDFGLARDIYKDPDYVR 237 (343)
T ss_pred cchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcC--CCcEEEEecccccccccCcchhh
Confidence 00123678888999999999999999999999999999999985 7789999999987543221
Q ss_pred -cccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhc
Q 004954 578 -CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYFT 655 (722)
Q Consensus 578 -~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~~~~~~~~ 655 (722)
....+++.|+|||.+.+..++.++||||||+++|+|++ |..||........+...+.
T Consensus 238 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~--------------------- 296 (343)
T cd05103 238 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK--------------------- 296 (343)
T ss_pred cCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHh---------------------
Confidence 11234567999999999899999999999999999997 9999976433221111110
Q ss_pred ccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhC
Q 004954 656 KEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 715 (722)
Q Consensus 656 ~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~H 715 (722)
.......| ...++.+.+++.+||+.||.+|||+.++++|
T Consensus 297 ------------~~~~~~~~---------~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~ 335 (343)
T cd05103 297 ------------EGTRMRAP---------DYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 335 (343)
T ss_pred ------------ccCCCCCC---------CCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 00000111 1134568899999999999999999999987
No 337
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=8.9e-33 Score=291.76 Aligned_cols=254 Identities=28% Similarity=0.395 Sum_probs=194.4
Q ss_pred cEEEEEEeccCCCCceEEEEEC---CCCcEEEEEEeecch-----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEE
Q 004954 415 RYYVTEYLGSAAFSKVFQAQDL---HTGVDVCLKIIKNDK-----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY 486 (722)
Q Consensus 415 rY~i~~~LG~G~fG~Vy~a~d~---~tg~~vAvKil~~~~-----~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~ 486 (722)
+|++.+.||+|++|.||++++. .+++.+|||+++... .....+.+|+.+++.+.+ |++|+++++.+.
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~-----~~~i~~~~~~~~ 75 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRR-----CPFLVTLHYAFQ 75 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccC-----Ccchhhhheeee
Confidence 4889999999999999999864 467899999987532 223456678888887753 689999999999
Q ss_pred ecCeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEE
Q 004954 487 HLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKII 565 (722)
Q Consensus 487 ~~~~l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~ 565 (722)
.....++||||+.+ +|.+.+.... .+++..++.++.|++.||.|||+.|++|+||+|+||+++. ++.++|+
T Consensus 76 ~~~~~~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~--~~~~~l~ 147 (288)
T cd05583 76 TDTKLHLILDYVNGGELFTHLYQRE------HFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDS--EGHVVLT 147 (288)
T ss_pred cCCEEEEEEecCCCCcHHHHHhhcC------CcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECC--CCCEEEE
Confidence 99999999999985 6666654321 2888999999999999999999999999999999999986 7789999
Q ss_pred ecCCcccccCCc----cccccCCcccCchhhcCCC--CCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCC
Q 004954 566 DLGSSCFQTDNL----CLYVQSRSYRAPEVIIGLP--YDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPI 639 (722)
Q Consensus 566 DFGls~~~~~~~----~~~~gt~~y~APE~l~~~~--~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~ 639 (722)
|||++....... ....+++.|+|||.+.+.. .+.++|+||||+++|+|++|..||...........+..
T Consensus 148 dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~----- 222 (288)
T cd05583 148 DFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISR----- 222 (288)
T ss_pred ECccccccccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHH-----
Confidence 999886543221 2245788999999987765 78899999999999999999999964321111111100
Q ss_pred cHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcC---HHHHHhCC
Q 004954 640 DLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPT---AREALDHP 716 (722)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpT---a~ElL~HP 716 (722)
... ......| ...+..+.+||.+||+.||++||| +.++|+||
T Consensus 223 -------------~~~-------------~~~~~~~---------~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~ 267 (288)
T cd05583 223 -------------RIL-------------KSKPPFP---------KTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHP 267 (288)
T ss_pred -------------HHH-------------ccCCCCC---------cccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCc
Confidence 000 0000011 113456889999999999999998 57789999
Q ss_pred CCCCC
Q 004954 717 WLQHP 721 (722)
Q Consensus 717 wf~~~ 721 (722)
||+..
T Consensus 268 ~~~~~ 272 (288)
T cd05583 268 FFQGI 272 (288)
T ss_pred ccccC
Confidence 99763
No 338
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=9.8e-33 Score=293.10 Aligned_cols=258 Identities=21% Similarity=0.303 Sum_probs=194.8
Q ss_pred cCcEEEEEEeccCCCCceEEEEECC----------------CCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCC
Q 004954 413 AGRYYVTEYLGSAAFSKVFQAQDLH----------------TGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPAD 474 (722)
Q Consensus 413 ~~rY~i~~~LG~G~fG~Vy~a~d~~----------------tg~~vAvKil~~~~--~~~~~~~~E~~il~~L~~~~~~~ 474 (722)
.++|++.+.||+|+||.||++.+.. ++..+|+|+++... .....+.+|+.+++.++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~------ 77 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLK------ 77 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCC------
Confidence 4689999999999999999986432 34579999987542 33456778888888775
Q ss_pred CCceeEEEEEEEecCeEEEEEEccc-cchHHHHhhhhccC-----CCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCC
Q 004954 475 EHHILRLYDYFYHLEHLFIVCELLR-ANLYEFQKFNQESG-----GEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLK 548 (722)
Q Consensus 475 hpnIv~l~~~f~~~~~l~iVmEy~~-gsLl~~l~~~~~~~-----~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLK 548 (722)
|+||+++++++...+..++||||+. ++|.+++....... ....+++..+..++.||+.||+|||+.|++|+|||
T Consensus 78 ~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlk 157 (296)
T cd05095 78 DPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLA 157 (296)
T ss_pred CCCcceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCC
Confidence 6799999999999999999999997 47777765433211 11347788999999999999999999999999999
Q ss_pred CCceEEcccCCCeEEEEecCCcccccCCc-----cccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh--CCCCCC
Q 004954 549 PENILIKSYQRCEIKIIDLGSSCFQTDNL-----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT--GEVLFP 621 (722)
Q Consensus 549 p~NILl~~~~~~~vkL~DFGls~~~~~~~-----~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt--G~~PF~ 621 (722)
|+|||++. ++.++|+|||++....... .....++.|+|||+..+..++.++|||||||++|+|++ |..||.
T Consensus 158 p~Nili~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~ 235 (296)
T cd05095 158 TRNCLVGK--NYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYS 235 (296)
T ss_pred hheEEEcC--CCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCcc
Confidence 99999985 7889999999987543221 11233567999999988889999999999999999998 789997
Q ss_pred CChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhccc
Q 004954 622 NDAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEI 701 (722)
Q Consensus 622 ~~~~~e~l~~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~ 701 (722)
..+..+....... ++.... . ...+|. +...+..+.+||.+||+.
T Consensus 236 ~~~~~~~~~~~~~------------------~~~~~~---------~--~~~~~~-------~~~~~~~~~~li~~cl~~ 279 (296)
T cd05095 236 QLSDEQVIENTGE------------------FFRDQG---------R--QVYLPK-------PALCPDSLYKLMLSCWRR 279 (296)
T ss_pred ccChHHHHHHHHH------------------HHhhcc---------c--cccCCC-------CCCCCHHHHHHHHHHcCC
Confidence 7655544432210 000000 0 000010 011235688999999999
Q ss_pred CCCCCcCHHHHHh
Q 004954 702 NPQRRPTAREALD 714 (722)
Q Consensus 702 dP~kRpTa~ElL~ 714 (722)
||.+||++.++++
T Consensus 280 ~p~~Rp~~~~i~~ 292 (296)
T cd05095 280 NAKERPSFQEIHA 292 (296)
T ss_pred CcccCCCHHHHHH
Confidence 9999999999975
No 339
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=1.1e-32 Score=284.16 Aligned_cols=244 Identities=25% Similarity=0.377 Sum_probs=196.4
Q ss_pred EEEEEEeccCCCCceEEEEECCCC----cEEEEEEeecchh--hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 004954 416 YYVTEYLGSAAFSKVFQAQDLHTG----VDVCLKIIKNDKD--FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (722)
Q Consensus 416 Y~i~~~LG~G~fG~Vy~a~d~~tg----~~vAvKil~~~~~--~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (722)
+++.+.||.|+||.||++++...+ ..+|+|+++.... ....+..|+.+++.+. |+||+++++.+...+
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~ 74 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLD------HPNIVKLLGVCTEEE 74 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcC------CCchheEEEEEcCCC
Confidence 357788999999999999988766 8999999976543 4567778888888774 679999999999999
Q ss_pred eEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecC
Q 004954 490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (722)
Q Consensus 490 ~l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFG 568 (722)
..+++|||+.+ +|.+.+...... .+++..+..++.||+.||++||+.|++|+||+|+||+++. ++.++|+|||
T Consensus 75 ~~~~i~e~~~~~~l~~~~~~~~~~----~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~--~~~~~l~dfg 148 (258)
T smart00219 75 PLMIVMEYMEGGDLLDYLRKNRPK----ELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGE--NLVVKISDFG 148 (258)
T ss_pred eeEEEEeccCCCCHHHHHHhhhhc----cCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEcc--CCeEEEcccC
Confidence 99999999975 676666543321 1789999999999999999999999999999999999996 7789999999
Q ss_pred CcccccCCccc----cccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHHH
Q 004954 569 SSCFQTDNLCL----YVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEM 643 (722)
Q Consensus 569 ls~~~~~~~~~----~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~~i~~~lg~~~~~~ 643 (722)
++......... ..+++.|+|||.+.+..++.++||||||+++|+|++ |.+||...+.......+....
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~------- 221 (258)
T smart00219 149 LSRDLYDDDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGY------- 221 (258)
T ss_pred CceecccccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCC-------
Confidence 98765433111 225688999999988889999999999999999998 899998766655554442110
Q ss_pred HhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHh
Q 004954 644 LMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 714 (722)
Q Consensus 644 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~ 714 (722)
....+ ...+..+.+++.+||..||++|||+.++++
T Consensus 222 ---------------------------~~~~~---------~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 256 (258)
T smart00219 222 ---------------------------RLPKP---------ENCPPEIYKLMLQCWAEDPEDRPTFSELVE 256 (258)
T ss_pred ---------------------------CCCCC---------CcCCHHHHHHHHHHCcCChhhCcCHHHHHh
Confidence 00011 113466889999999999999999999986
No 340
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=1.1e-32 Score=285.98 Aligned_cols=237 Identities=24% Similarity=0.287 Sum_probs=186.3
Q ss_pred EEeccCCCCceEEEEECCCC---cEEEEEEeecchh--hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEE
Q 004954 420 EYLGSAAFSKVFQAQDLHTG---VDVCLKIIKNDKD--FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIV 494 (722)
Q Consensus 420 ~~LG~G~fG~Vy~a~d~~tg---~~vAvKil~~~~~--~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~iV 494 (722)
++||+|+||.||+|.+..++ ..+|+|.+..... ....+.+|+.+++.+ +|+||+++++++. ....++|
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l------~h~~iv~~~~~~~-~~~~~~v 73 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQL------DHPCIVRLIGVCK-GEPLMLV 73 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhc------CCCCeeeEEEEEc-CCceEEE
Confidence 46999999999999876554 7899999876543 445677788887766 4789999999875 4568999
Q ss_pred EEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCcccc
Q 004954 495 CELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQ 573 (722)
Q Consensus 495 mEy~~-gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~ 573 (722)
|||+. ++|.+++.... .+++..+..++.|++.||+|||..+++|+||||+|||++. ++.+||+|||++...
T Consensus 74 ~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~--~~~~kl~df~~~~~~ 145 (257)
T cd05060 74 MELAPLGPLLKYLKKRR------EIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVN--RHQAKISDFGMSRAL 145 (257)
T ss_pred EEeCCCCcHHHHHHhCC------CCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcC--CCcEEecccccccee
Confidence 99997 47777776433 3889999999999999999999999999999999999986 788999999998765
Q ss_pred cCCccc------cccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHHHHhh
Q 004954 574 TDNLCL------YVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLMQ 646 (722)
Q Consensus 574 ~~~~~~------~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~ 646 (722)
...... ..++..|+|||.+.+..++.++|||||||++|+|++ |.+||...+..+....+....
T Consensus 146 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~---------- 215 (257)
T cd05060 146 GAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGE---------- 215 (257)
T ss_pred ecCCcccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCC----------
Confidence 433221 112357999999998899999999999999999998 999997765544443332100
Q ss_pred hhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHh
Q 004954 647 GQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 714 (722)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~ 714 (722)
....| ...+..+.++|.+||..+|.+||++.++++
T Consensus 216 ------------------------~~~~~---------~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~ 250 (257)
T cd05060 216 ------------------------RLPRP---------EECPQEIYSIMLSCWKYRPEDRPTFSELES 250 (257)
T ss_pred ------------------------cCCCC---------CCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 00011 112356889999999999999999999985
No 341
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=1.2e-32 Score=288.22 Aligned_cols=245 Identities=22% Similarity=0.288 Sum_probs=190.2
Q ss_pred EeccCCCCceEEEEECCCCc--EEEEEEeecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEEE
Q 004954 421 YLGSAAFSKVFQAQDLHTGV--DVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCE 496 (722)
Q Consensus 421 ~LG~G~fG~Vy~a~d~~tg~--~vAvKil~~~--~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~iVmE 496 (722)
.||+|+||.||+|++..++. .+++|.++.. ......+.+|+.++.++. .||||+++++++...+..++|||
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~-----~h~~iv~~~~~~~~~~~~~lv~e 76 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLG-----HHPNIINLLGACEHRGYLYLAIE 76 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhc-----cCCCeeeEEEEEecCCCceEEEE
Confidence 58999999999999888776 4688887642 334456778888888885 37899999999999999999999
Q ss_pred ccc-cchHHHHhhhhcc----------CCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEE
Q 004954 497 LLR-ANLYEFQKFNQES----------GGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKII 565 (722)
Q Consensus 497 y~~-gsLl~~l~~~~~~----------~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~ 565 (722)
|+. ++|.+++...... .....+++..++.++.|++.||+|||+.|++|+||||+||+++. ++.+||+
T Consensus 77 ~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~--~~~~kl~ 154 (270)
T cd05047 77 YAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGE--NYVAKIA 154 (270)
T ss_pred eCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcC--CCeEEEC
Confidence 997 5788777644321 11234789999999999999999999999999999999999985 7889999
Q ss_pred ecCCcccccCCc--cccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHH
Q 004954 566 DLGSSCFQTDNL--CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLE 642 (722)
Q Consensus 566 DFGls~~~~~~~--~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~~i~~~lg~~~~~ 642 (722)
|||++....... .....+..|+|||++.+..++.++|||||||++|+|++ |..||.+.+..+....+...
T Consensus 155 dfgl~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~------- 227 (270)
T cd05047 155 DFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG------- 227 (270)
T ss_pred CCCCccccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhCC-------
Confidence 999985332211 11223567999999988889999999999999999997 99999776554444332100
Q ss_pred HHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhC
Q 004954 643 MLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 715 (722)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~H 715 (722)
.....+ ...+..+.+|+.+||..||.+|||+.+++..
T Consensus 228 ---------------------------~~~~~~---------~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 264 (270)
T cd05047 228 ---------------------------YRLEKP---------LNCDDEVYDLMRQCWREKPYERPSFAQILVS 264 (270)
T ss_pred ---------------------------CCCCCC---------CcCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence 000001 1123568899999999999999999999863
No 342
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=1.3e-32 Score=289.90 Aligned_cols=251 Identities=24% Similarity=0.308 Sum_probs=195.1
Q ss_pred cCcEEEEEEeccCCCCceEEEEE-----CCCCcEEEEEEeecc-hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEE
Q 004954 413 AGRYYVTEYLGSAAFSKVFQAQD-----LHTGVDVCLKIIKND-KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY 486 (722)
Q Consensus 413 ~~rY~i~~~LG~G~fG~Vy~a~d-----~~tg~~vAvKil~~~-~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~ 486 (722)
..+|++.++||+|+||.||+++. ..++..+|+|.+... ......+.+|+++++.++ |+||+++++++.
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~ 77 (280)
T cd05092 4 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQ------HQHIVRFYGVCT 77 (280)
T ss_pred hHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCC------CCCCceEEEEEe
Confidence 35788999999999999999974 335678999987643 333456777888887764 679999999999
Q ss_pred ecCeEEEEEEccc-cchHHHHhhhhc---------cCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcc
Q 004954 487 HLEHLFIVCELLR-ANLYEFQKFNQE---------SGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKS 556 (722)
Q Consensus 487 ~~~~l~iVmEy~~-gsLl~~l~~~~~---------~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~ 556 (722)
..+..++||||+. ++|.+++..... ......+++..++.++.||+.||+|||+.|++|+||||+|||++.
T Consensus 78 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~ 157 (280)
T cd05092 78 EGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQ 157 (280)
T ss_pred cCCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcC
Confidence 9999999999997 467777654321 011124788999999999999999999999999999999999985
Q ss_pred cCCCeEEEEecCCcccccCCc-----cccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHH
Q 004954 557 YQRCEIKIIDLGSSCFQTDNL-----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILA 630 (722)
Q Consensus 557 ~~~~~vkL~DFGls~~~~~~~-----~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~ 630 (722)
++.++|+|||++....... ....+++.|+|||.+.+..++.++|||||||++|+|++ |.+||......+.+.
T Consensus 158 --~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~ 235 (280)
T cd05092 158 --GLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIE 235 (280)
T ss_pred --CCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHH
Confidence 7889999999986543221 12234678999999999999999999999999999998 999997765554443
Q ss_pred HHHhhcCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHH
Q 004954 631 RIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAR 710 (722)
Q Consensus 631 ~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ 710 (722)
.+.... ....+ ...++.+.+||.+||+.||.+||++.
T Consensus 236 ~~~~~~----------------------------------~~~~~---------~~~~~~~~~li~~cl~~~P~~Rp~~~ 272 (280)
T cd05092 236 CITQGR----------------------------------ELERP---------RTCPPEVYAIMQGCWQREPQQRMVIK 272 (280)
T ss_pred HHHcCc----------------------------------cCCCC---------CCCCHHHHHHHHHHccCChhhCCCHH
Confidence 332110 00001 12245688999999999999999999
Q ss_pred HHHh
Q 004954 711 EALD 714 (722)
Q Consensus 711 ElL~ 714 (722)
++++
T Consensus 273 ~l~~ 276 (280)
T cd05092 273 DIHS 276 (280)
T ss_pred HHHH
Confidence 9985
No 343
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=1.4e-32 Score=289.55 Aligned_cols=245 Identities=21% Similarity=0.238 Sum_probs=185.5
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCc----EEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEE
Q 004954 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGV----DVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY 486 (722)
Q Consensus 413 ~~rY~i~~~LG~G~fG~Vy~a~d~~tg~----~vAvKil~~~~--~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~ 486 (722)
.++|++.+.||+|+||+||+|.+..+++ .+++|.+.... .....+..|+.++.. ..||||+++++++.
T Consensus 6 ~~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~------l~h~~iv~~~~~~~ 79 (279)
T cd05111 6 ETELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGS------LDHAYIVRLLGICP 79 (279)
T ss_pred HhhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhc------CCCCCcceEEEEEC
Confidence 3578999999999999999999887776 46777764322 122333344444433 45899999999875
Q ss_pred ecCeEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEE
Q 004954 487 HLEHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKII 565 (722)
Q Consensus 487 ~~~~l~iVmEy~~-gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~ 565 (722)
....++|+||+. |+|.+++..... .+++..+..++.||+.||+|||+.+++||||||+|||++. ++.+||+
T Consensus 80 -~~~~~~i~e~~~~gsL~~~l~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~--~~~~kl~ 151 (279)
T cd05111 80 -GASLQLVTQLSPLGSLLDHVRQHRD-----SLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKS--DSIVQIA 151 (279)
T ss_pred -CCccEEEEEeCCCCcHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcC--CCcEEEc
Confidence 456788999997 678777764322 3889999999999999999999999999999999999985 7889999
Q ss_pred ecCCcccccCCc-----cccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCC
Q 004954 566 DLGSSCFQTDNL-----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPI 639 (722)
Q Consensus 566 DFGls~~~~~~~-----~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~~i~~~lg~~ 639 (722)
|||++....... ....++..|+|||.+.+..++.++|||||||++|||++ |..||.+.........+...
T Consensus 152 Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~---- 227 (279)
T cd05111 152 DFGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEKG---- 227 (279)
T ss_pred CCccceeccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCC----
Confidence 999987543221 12345678999999998899999999999999999998 99999876544332221100
Q ss_pred cHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHh
Q 004954 640 DLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 714 (722)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~ 714 (722)
.....+ ...+..+.+++.+||..||.+|||+.|+++
T Consensus 228 ------------------------------~~~~~~---------~~~~~~~~~li~~c~~~~p~~Rps~~el~~ 263 (279)
T cd05111 228 ------------------------------ERLAQP---------QICTIDVYMVMVKCWMIDENVRPTFKELAN 263 (279)
T ss_pred ------------------------------CcCCCC---------CCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 000001 112356789999999999999999999986
No 344
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=2e-32 Score=283.43 Aligned_cols=240 Identities=25% Similarity=0.324 Sum_probs=190.3
Q ss_pred EEeccCCCCceEEEEECC-CC--cEEEEEEeecchh--hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEE
Q 004954 420 EYLGSAAFSKVFQAQDLH-TG--VDVCLKIIKNDKD--FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIV 494 (722)
Q Consensus 420 ~~LG~G~fG~Vy~a~d~~-tg--~~vAvKil~~~~~--~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~iV 494 (722)
+.||+|++|.||+|.+.. .+ ..+|||.+..... ....+.+|+.+++.++ |+||+++++.+.. ...++|
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~------h~~iv~~~~~~~~-~~~~~v 73 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLD------HENLIRLYGVVLT-HPLMMV 73 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcC------CCCccceeEEEcC-CeEEEE
Confidence 368999999999999855 33 3689999876543 3456677888777774 6899999999988 899999
Q ss_pred EEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCcccc
Q 004954 495 CELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQ 573 (722)
Q Consensus 495 mEy~~-gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~ 573 (722)
|||+. ++|.+.+..... ..+++..++.++.|++.||+|||+.|++|+||+|+||+++. ++.+||+|||++...
T Consensus 74 ~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~--~~~~kl~dfg~~~~~ 147 (257)
T cd05040 74 TELAPLGSLLDRLRKDAL----GHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLAS--DDKVKIGDFGLMRAL 147 (257)
T ss_pred EEecCCCcHHHHHHhccc----ccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEec--CCEEEeccccccccc
Confidence 99996 577777664331 23889999999999999999999999999999999999996 689999999998765
Q ss_pred cCCc------cccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHHHHhh
Q 004954 574 TDNL------CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLMQ 646 (722)
Q Consensus 574 ~~~~------~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~ 646 (722)
.... ....++..|+|||.+.+..++.++|||||||++|+|++ |..||...+..+....+.....
T Consensus 148 ~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~--------- 218 (257)
T cd05040 148 PQNEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGE--------- 218 (257)
T ss_pred cccccceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCC---------
Confidence 4321 12345678999999998899999999999999999998 9999987766665544431000
Q ss_pred hhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHh
Q 004954 647 GQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 714 (722)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~ 714 (722)
....+ ...+..+.++|.+||+.+|++|||+.++++
T Consensus 219 ------------------------~~~~~---------~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 253 (257)
T cd05040 219 ------------------------RLERP---------EACPQDIYNVMLQCWAHNPADRPTFAALRE 253 (257)
T ss_pred ------------------------cCCCC---------ccCCHHHHHHHHHHCCCCcccCCCHHHHHH
Confidence 00001 112356889999999999999999999986
No 345
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=3.3e-33 Score=287.55 Aligned_cols=228 Identities=24% Similarity=0.294 Sum_probs=181.1
Q ss_pred CCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEEEcccc-chH
Q 004954 425 AAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRA-NLY 503 (722)
Q Consensus 425 G~fG~Vy~a~d~~tg~~vAvKil~~~~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~iVmEy~~g-sLl 503 (722)
|.+|+||++++..+++.+|+|.++..... .+|...+.. ..||||+++++++...+..++||||+.+ +|.
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~~----~~~~~~~~~------~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 73 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSSEY----SRERLTIIP------HCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLW 73 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchhhh----hhHHHHHHh------cCCCceeehhhheecCCeEEEEEecCCCCCHH
Confidence 88999999999999999999999765321 222222221 2478999999999999999999999985 676
Q ss_pred HHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCcccccCCccccccC
Q 004954 504 EFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQS 583 (722)
Q Consensus 504 ~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~~~~~~~~gt 583 (722)
+.+.... .+++..+..++.|++.||.|||+.||+||||||+||+++. ++.++|+|||.+...........++
T Consensus 74 ~~l~~~~------~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~--~~~~~l~df~~~~~~~~~~~~~~~~ 145 (237)
T cd05576 74 SHISKFL------NIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDD--RGHIQLTYFSRWSEVEDSCDGEAVE 145 (237)
T ss_pred HHHHHhc------CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcC--CCCEEEecccchhccccccccCCcC
Confidence 7665432 2889999999999999999999999999999999999996 7789999999876665554455667
Q ss_pred CcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhcccccchhh
Q 004954 584 RSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYI 663 (722)
Q Consensus 584 ~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~ 663 (722)
..|+|||.+.+..++.++|+||+|+++|+|++|..||...... +.
T Consensus 146 ~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~-----~~------------------------------ 190 (237)
T cd05576 146 NMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG-----IN------------------------------ 190 (237)
T ss_pred ccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh-----cc------------------------------
Confidence 8899999998888999999999999999999999887432100 00
Q ss_pred hhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCH-----HHHHhCCCC
Q 004954 664 NEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTA-----REALDHPWL 718 (722)
Q Consensus 664 ~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa-----~ElL~HPwf 718 (722)
......+| ...++.+.+||++||+.||++||++ +++++||||
T Consensus 191 ----~~~~~~~~---------~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~~ 237 (237)
T cd05576 191 ----THTTLNIP---------EWVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF 237 (237)
T ss_pred ----cccccCCc---------ccCCHHHHHHHHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence 00000111 1234668899999999999999996 999999997
No 346
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-33 Score=304.68 Aligned_cols=197 Identities=22% Similarity=0.349 Sum_probs=167.7
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhh-hHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC-eE
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF-FDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE-HL 491 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~~-~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~-~l 491 (722)
++|.-...||+|+||.||+|.. .+|+.||||.+...... ..++.+|+.++.+++ |||||+++|+|...+ +.
T Consensus 75 ~~Fs~~~~ig~Ggfg~VYkG~l-~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~------H~Nlv~LlGyC~e~~~~~ 147 (361)
T KOG1187|consen 75 NNFSESNLIGEGGFGTVYKGVL-SDGTVVAVKRLSSNSGQGEREFLNEVEILSRLR------HPNLVKLLGYCLEGGEHR 147 (361)
T ss_pred hCCchhcceecCCCeEEEEEEE-CCCCEEEEEEecCCCCcchhHHHHHHHHHhcCC------CcCcccEEEEEecCCceE
Confidence 5677778899999999999984 55689999988765543 456889999998886 679999999999998 59
Q ss_pred EEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCC---CccccCCCCceEEcccCCCeEEEEec
Q 004954 492 FIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLG---IIHCDLKPENILIKSYQRCEIKIIDL 567 (722)
Q Consensus 492 ~iVmEy~~-gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~g---IvHrDLKp~NILl~~~~~~~vkL~DF 567 (722)
++|+|||. |+|.+.+...... .++|..+..|+.++++||+|||+.. ||||||||+|||++. +.+.||+||
T Consensus 148 ~LVYEym~nGsL~d~L~~~~~~----~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~--~~~aKlsDF 221 (361)
T KOG1187|consen 148 LLVYEYMPNGSLEDHLHGKKGE----PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDE--DFNAKLSDF 221 (361)
T ss_pred EEEEEccCCCCHHHHhCCCCCC----CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECC--CCCEEccCc
Confidence 99999997 5777766543321 5899999999999999999999854 999999999999996 899999999
Q ss_pred CCcccccC-Cccc--c-ccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 004954 568 GSSCFQTD-NLCL--Y-VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPND 623 (722)
Q Consensus 568 Gls~~~~~-~~~~--~-~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~ 623 (722)
|+|+.... .... . .||.+|+|||.+.....+.++||||||++|.||+||+.|....
T Consensus 222 GLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~ 281 (361)
T KOG1187|consen 222 GLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQS 281 (361)
T ss_pred cCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCC
Confidence 99976654 3222 2 7999999999999888999999999999999999999887643
No 347
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=1.2e-32 Score=289.92 Aligned_cols=258 Identities=22% Similarity=0.257 Sum_probs=189.1
Q ss_pred cCcE-EEEEEeccCCCCceEEEE----ECCCCcEEEEEEeecchh--hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEE
Q 004954 413 AGRY-YVTEYLGSAAFSKVFQAQ----DLHTGVDVCLKIIKNDKD--FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYF 485 (722)
Q Consensus 413 ~~rY-~i~~~LG~G~fG~Vy~a~----d~~tg~~vAvKil~~~~~--~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f 485 (722)
.+|| ++++.||+|+||+||++. ...+++.||+|+++.... ....+.+|+.+++.++ ||||+++++++
T Consensus 2 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~------h~~i~~~~~~~ 75 (283)
T cd05080 2 HKRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLY------HENIVKYKGCC 75 (283)
T ss_pred ChhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCC------CCCEeeEEEEE
Confidence 3566 999999999999998864 345788999999876432 3456677888888774 78999999988
Q ss_pred Eec--CeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeE
Q 004954 486 YHL--EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI 562 (722)
Q Consensus 486 ~~~--~~l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~v 562 (722)
... ..+++||||+.+ +|.+++... .+++..++.++.|++.||.|||++||+||||||+|||++. ++.+
T Consensus 76 ~~~~~~~~~lv~e~~~~~~l~~~~~~~-------~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~--~~~~ 146 (283)
T cd05080 76 SEQGGKGLQLIMEYVPLGSLRDYLPKH-------KLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDN--DRLV 146 (283)
T ss_pred ecCCCceEEEEecCCCCCCHHHHHHHc-------CCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcC--CCcE
Confidence 754 468999999985 565655422 2899999999999999999999999999999999999986 7789
Q ss_pred EEEecCCcccccCCcc------ccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHH-hh
Q 004954 563 KIIDLGSSCFQTDNLC------LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARII-GM 635 (722)
Q Consensus 563 kL~DFGls~~~~~~~~------~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~-~~ 635 (722)
+|+|||++........ ...++..|+|||.+.+..++.++||||||+++|+|++|..||....... ..+. ..
T Consensus 147 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~--~~~~~~~ 224 (283)
T cd05080 147 KIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKF--EEMIGPK 224 (283)
T ss_pred EEeecccccccCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchh--hhhhccc
Confidence 9999999876543221 1234567999999998889999999999999999999999986543211 1111 00
Q ss_pred cCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHh
Q 004954 636 LGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 714 (722)
Q Consensus 636 lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~ 714 (722)
.+......+. +.. ..... .+ .....+..+.+++.+||+.+|++|||++++++
T Consensus 225 ~~~~~~~~~~------~~~------------~~~~~--~~-------~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~ 276 (283)
T cd05080 225 QGQMTVVRLI------ELL------------ERGMR--LP-------CPKNCPQEVYILMKNCWETEAKFRPTFRSLIP 276 (283)
T ss_pred ccccchhhhh------hhh------------hcCCC--CC-------CCCCCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 0000000000 000 00000 00 01223467999999999999999999999985
No 348
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=2.5e-32 Score=285.36 Aligned_cols=247 Identities=22% Similarity=0.307 Sum_probs=193.5
Q ss_pred ecCcEEEEEEeccCCCCceEEEEECCC---CcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEE
Q 004954 412 IAGRYYVTEYLGSAAFSKVFQAQDLHT---GVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY 486 (722)
Q Consensus 412 l~~rY~i~~~LG~G~fG~Vy~a~d~~t---g~~vAvKil~~~~--~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~ 486 (722)
-..+|.+.++||+|+||.||+|.+... ...+|||...... ...+.+.+|+.+++.+. ||||+++++++.
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~------h~~i~~~~~~~~ 77 (270)
T cd05056 4 QREDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFD------HPHIVKLIGVIT 77 (270)
T ss_pred chhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCC------CCchhceeEEEc
Confidence 346799999999999999999987543 4568999887543 34456777888887774 689999999886
Q ss_pred ecCeEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEE
Q 004954 487 HLEHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKII 565 (722)
Q Consensus 487 ~~~~l~iVmEy~~-gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~ 565 (722)
. ...++||||+. ++|.+++..... .+++..++.++.||+.||.|||+.|++|+||||+||+++. .+.++|+
T Consensus 78 ~-~~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~--~~~~~l~ 149 (270)
T cd05056 78 E-NPVWIVMELAPLGELRSYLQVNKY-----SLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSS--PDCVKLG 149 (270)
T ss_pred C-CCcEEEEEcCCCCcHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEec--CCCeEEc
Confidence 5 56789999997 467777654321 2889999999999999999999999999999999999996 7789999
Q ss_pred ecCCcccccCCcc----ccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCc
Q 004954 566 DLGSSCFQTDNLC----LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPID 640 (722)
Q Consensus 566 DFGls~~~~~~~~----~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~~i~~~lg~~~ 640 (722)
|||++........ ...+++.|+|||.+....++.++||||||+++|+|++ |..||......+.+..+....
T Consensus 150 d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~---- 225 (270)
T cd05056 150 DFGLSRYLEDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGE---- 225 (270)
T ss_pred cCceeeecccccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCC----
Confidence 9999875443311 1223467999999988889999999999999999986 999998776655544432100
Q ss_pred HHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhC
Q 004954 641 LEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 715 (722)
Q Consensus 641 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~H 715 (722)
....| ...+..+.++|.+||..+|.+|||+.+++..
T Consensus 226 ------------------------------~~~~~---------~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~ 261 (270)
T cd05056 226 ------------------------------RLPMP---------PNCPPTLYSLMTKCWAYDPSKRPRFTELKAQ 261 (270)
T ss_pred ------------------------------cCCCC---------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 00011 1224568999999999999999999999864
No 349
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=2.1e-32 Score=304.32 Aligned_cols=255 Identities=21% Similarity=0.292 Sum_probs=197.3
Q ss_pred ecCcEEEEEEeccCCCCceEEEEEC-----CCCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEE
Q 004954 412 IAGRYYVTEYLGSAAFSKVFQAQDL-----HTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDY 484 (722)
Q Consensus 412 l~~rY~i~~~LG~G~fG~Vy~a~d~-----~tg~~vAvKil~~~~--~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~ 484 (722)
-.++|.+.++||+|+||.||+|++. .+++.||+|+++... .....+.+|++++..+. .||||++++++
T Consensus 35 ~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~-----~H~niv~~~~~ 109 (401)
T cd05107 35 PRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLG-----PHLNIVNLLGA 109 (401)
T ss_pred cHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcC-----CCCCeEEEEEE
Confidence 3467889999999999999999853 355789999997542 22345778888888774 27899999999
Q ss_pred EEecCeEEEEEEccc-cchHHHHhhhhcc---------------------------------------------------
Q 004954 485 FYHLEHLFIVCELLR-ANLYEFQKFNQES--------------------------------------------------- 512 (722)
Q Consensus 485 f~~~~~l~iVmEy~~-gsLl~~l~~~~~~--------------------------------------------------- 512 (722)
+....+.++||||+. |+|.+++......
T Consensus 110 ~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (401)
T cd05107 110 CTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADY 189 (401)
T ss_pred EccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCc
Confidence 999999999999997 5788777643210
Q ss_pred -----------------------------------------CCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCc
Q 004954 513 -----------------------------------------GGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPEN 551 (722)
Q Consensus 513 -----------------------------------------~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~N 551 (722)
.....+++..++.++.||+.||.|||+.+|+||||||+|
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~N 269 (401)
T cd05107 190 VPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARN 269 (401)
T ss_pred cchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcce
Confidence 011246778889999999999999999999999999999
Q ss_pred eEEcccCCCeEEEEecCCcccccCC-----ccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChH
Q 004954 552 ILIKSYQRCEIKIIDLGSSCFQTDN-----LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAV 625 (722)
Q Consensus 552 ILl~~~~~~~vkL~DFGls~~~~~~-----~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~ 625 (722)
||++. .+.+||+|||++...... .....+++.|+|||.+.+..++.++|||||||++|||++ |..||.....
T Consensus 270 iLl~~--~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~ 347 (401)
T cd05107 270 VLICE--GKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPM 347 (401)
T ss_pred EEEeC--CCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCc
Confidence 99985 778999999998754321 112345788999999998889999999999999999998 8999976544
Q ss_pred HHHHHHHHhhcCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCC
Q 004954 626 VMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQR 705 (722)
Q Consensus 626 ~e~l~~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~k 705 (722)
.+.+...+.. ......| ...+..+.+||.+||..+|.+
T Consensus 348 ~~~~~~~~~~---------------------------------~~~~~~p---------~~~~~~l~~li~~cl~~~P~~ 385 (401)
T cd05107 348 NEQFYNAIKR---------------------------------GYRMAKP---------AHASDEIYEIMQKCWEEKFEI 385 (401)
T ss_pred hHHHHHHHHc---------------------------------CCCCCCC---------CCCCHHHHHHHHHHcCCChhH
Confidence 4333222100 0000011 112467899999999999999
Q ss_pred CcCHHHHHhC
Q 004954 706 RPTAREALDH 715 (722)
Q Consensus 706 RpTa~ElL~H 715 (722)
||++++||+.
T Consensus 386 RPs~~ell~~ 395 (401)
T cd05107 386 RPDFSQLVHL 395 (401)
T ss_pred CcCHHHHHHH
Confidence 9999999864
No 350
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=2e-32 Score=282.50 Aligned_cols=238 Identities=24% Similarity=0.362 Sum_probs=188.0
Q ss_pred EEeccCCCCceEEEEECCCCcEEEEEEeecchh--hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEEEc
Q 004954 420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD--FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCEL 497 (722)
Q Consensus 420 ~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~--~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~iVmEy 497 (722)
++||+|+||.||++.+.. ++.||+|++..... ....+.+|+++++.+. |+||+++++++......++||||
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~~~v~e~ 73 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYD------HPNIVKLIGVCVQKQPIYIVMEL 73 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCCHHHHHHHHHHHHHHHhCC------CCCeEEEEEEEecCCCeEEEEEc
Confidence 369999999999999877 99999998875432 3456677888777664 78999999999999999999999
Q ss_pred ccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCcccccCC
Q 004954 498 LRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDN 576 (722)
Q Consensus 498 ~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~~~ 576 (722)
+.+ +|.+++.... ..++...+..++.|++.||.|||+++++||||+|+||+++. ++.++|+|||.+......
T Consensus 74 ~~~~~l~~~l~~~~-----~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~--~~~~~l~d~g~~~~~~~~ 146 (251)
T cd05041 74 VPGGSLLTFLRKKK-----NRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGE--NNVLKISDFGMSREEEGG 146 (251)
T ss_pred CCCCcHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcC--CCcEEEeeccccccccCC
Confidence 975 5666664322 13788999999999999999999999999999999999985 788999999998755422
Q ss_pred cc-----ccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhh
Q 004954 577 LC-----LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEI 650 (722)
Q Consensus 577 ~~-----~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~~~ 650 (722)
.. ....+..|+|||.+.+..++.++|+|||||++|+|++ |..||...........+....
T Consensus 147 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~-------------- 212 (251)
T cd05041 147 IYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGY-------------- 212 (251)
T ss_pred cceeccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCC--------------
Confidence 11 1223556999999998889999999999999999999 899997765544333322100
Q ss_pred hhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHh
Q 004954 651 YKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 714 (722)
Q Consensus 651 ~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~ 714 (722)
....| ...+..+.++|.+||+.+|.+|||+.|+|+
T Consensus 213 --------------------~~~~~---------~~~~~~~~~li~~~l~~~p~~Rp~~~ell~ 247 (251)
T cd05041 213 --------------------RMPAP---------QLCPEEIYRLMLQCWAYDPENRPSFSEIYN 247 (251)
T ss_pred --------------------CCCCC---------ccCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 00001 112456889999999999999999999986
No 351
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=2.4e-32 Score=286.01 Aligned_cols=252 Identities=21% Similarity=0.313 Sum_probs=196.8
Q ss_pred CcEEEEEEeccCCCCceEEEEECC-----CCcEEEEEEeecchh--hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEE
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLH-----TGVDVCLKIIKNDKD--FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY 486 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~-----tg~~vAvKil~~~~~--~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~ 486 (722)
.+|++++.||+|+||+||+|+.+. ..+.+++|.+..... ....+.+|+++++.++ |+||+++++++.
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~ 78 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLS------HKNVVRLLGLCR 78 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcC------CcceeeeEEEEC
Confidence 679999999999999999999653 356799998865432 3466788999988885 679999999999
Q ss_pred ecCeEEEEEEccc-cchHHHHhhhhccC---CCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeE
Q 004954 487 HLEHLFIVCELLR-ANLYEFQKFNQESG---GEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI 562 (722)
Q Consensus 487 ~~~~l~iVmEy~~-gsLl~~l~~~~~~~---~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~v 562 (722)
.....++||||+. ++|.+++....... ....+++..+..++.||+.||+|||+.+|+||||||+||+++. ++.+
T Consensus 79 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~--~~~~ 156 (275)
T cd05046 79 EAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSS--QREV 156 (275)
T ss_pred CCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeC--CCcE
Confidence 9899999999998 57777765433111 1124899999999999999999999999999999999999986 7889
Q ss_pred EEEecCCcccccCC----ccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcC
Q 004954 563 KIIDLGSSCFQTDN----LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLG 637 (722)
Q Consensus 563 kL~DFGls~~~~~~----~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~~i~~~lg 637 (722)
+|+|||++...... .....+++.|+|||.+.+..++.++||||||+++|+|++ |..||........+..+...
T Consensus 157 ~l~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~-- 234 (275)
T cd05046 157 KVSLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAG-- 234 (275)
T ss_pred EEcccccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcC--
Confidence 99999987643321 122345677999999988888999999999999999999 88999765544443332200
Q ss_pred CCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhC
Q 004954 638 PIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 715 (722)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~H 715 (722)
......+ ...+..+.++|.+||+.+|.+|||+.+++.+
T Consensus 235 -------------------------------~~~~~~~---------~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~ 272 (275)
T cd05046 235 -------------------------------KLELPVP---------EGCPSRLYKLMTRCWAVNPKDRPSFSELVSA 272 (275)
T ss_pred -------------------------------CcCCCCC---------CCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence 0000000 1234568999999999999999999999875
No 352
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=2.4e-32 Score=285.11 Aligned_cols=250 Identities=26% Similarity=0.404 Sum_probs=193.6
Q ss_pred cEEEEEEeccCCCCceEEEEECC-CCcEEEEEEeecch-----------hhhHhHHHHHHHHHHhcccCCCCCCceeEEE
Q 004954 415 RYYVTEYLGSAAFSKVFQAQDLH-TGVDVCLKIIKNDK-----------DFFDQSLDEIKLLKLVNKNDPADEHHILRLY 482 (722)
Q Consensus 415 rY~i~~~LG~G~fG~Vy~a~d~~-tg~~vAvKil~~~~-----------~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~ 482 (722)
.|++.+.||+|+||.||++++.. +++.+|+|.+.... ....+...|+.++... ..|+||++++
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-----~~h~~i~~~~ 75 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQ-----LRHPNIVRYY 75 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhc-----CCCCCeeeEE
Confidence 47889999999999999999877 78899999875321 1122344455544432 3588999999
Q ss_pred EEEEecCeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHH-CCCccccCCCCceEEcccCCC
Q 004954 483 DYFYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS-LGIIHCDLKPENILIKSYQRC 560 (722)
Q Consensus 483 ~~f~~~~~l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs-~gIvHrDLKp~NILl~~~~~~ 560 (722)
+++...++.++||||+.+ +|.+++...... ...+++..++.++.|++.||.|||+ .+++|+||+|+||+++. ++
T Consensus 76 ~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~--~~ 151 (269)
T cd08528 76 KTFLENDRLYIVMDLIEGAPLGEHFNSLKEK--KQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGE--DD 151 (269)
T ss_pred eeEccCCeEEEEEecCCCCcHHHHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECC--CC
Confidence 999999999999999975 676665432211 1238899999999999999999996 78999999999999986 78
Q ss_pred eEEEEecCCcccccCCc--cccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCC
Q 004954 561 EIKIIDLGSSCFQTDNL--CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGP 638 (722)
Q Consensus 561 ~vkL~DFGls~~~~~~~--~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~ 638 (722)
.++|+|||.+....... ....++..|+|||.+.+..++.++|+||||+++|+|++|++||...........+......
T Consensus 152 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 231 (269)
T cd08528 152 KVTITDFGLAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYE 231 (269)
T ss_pred cEEEecccceeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCC
Confidence 89999999987654432 3356788999999999888999999999999999999999999776555444333211000
Q ss_pred CcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhC
Q 004954 639 IDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 715 (722)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~H 715 (722)
..+ ....+..+.+||++||+.||++||++.|+..+
T Consensus 232 ----------------------------------~~~--------~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~ 266 (269)
T cd08528 232 ----------------------------------PLP--------EGMYSEDVTDVITSCLTPDAEARPDIIQVSAM 266 (269)
T ss_pred ----------------------------------cCC--------cccCCHHHHHHHHHHCCCCCccCCCHHHHHHH
Confidence 000 01124668899999999999999999999864
No 353
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=1.5e-32 Score=286.31 Aligned_cols=245 Identities=22% Similarity=0.318 Sum_probs=188.8
Q ss_pred EeccCCCCceEEEEECCCC------cEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEE
Q 004954 421 YLGSAAFSKVFQAQDLHTG------VDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF 492 (722)
Q Consensus 421 ~LG~G~fG~Vy~a~d~~tg------~~vAvKil~~~~--~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~ 492 (722)
.||+|+||.||+++++... +.+|+|.+.... .....+.+|+.+++.++ ||||+++++++......+
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~~~ 75 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFN------HPNIVKLLGVCLLNEPQY 75 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcC------CCCeeeEeeeecCCCCeE
Confidence 5899999999999976544 789999876543 33456667777777664 789999999999999999
Q ss_pred EEEEccc-cchHHHHhhhhccC-CCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccC---CCeEEEEec
Q 004954 493 IVCELLR-ANLYEFQKFNQESG-GEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQ---RCEIKIIDL 567 (722)
Q Consensus 493 iVmEy~~-gsLl~~l~~~~~~~-~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~---~~~vkL~DF 567 (722)
+||||+. ++|.+++....... ....+++.++..++.||+.||+|||+.+++|+||||+||+++.+. ...++|+||
T Consensus 76 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~df 155 (269)
T cd05044 76 IIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDF 155 (269)
T ss_pred EEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCc
Confidence 9999997 57777775432221 234478899999999999999999999999999999999998622 127999999
Q ss_pred CCcccccCCc-----cccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcH
Q 004954 568 GSSCFQTDNL-----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDL 641 (722)
Q Consensus 568 Gls~~~~~~~-----~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~~i~~~lg~~~~ 641 (722)
|++....... .....+..|+|||.+.+..++.++|||||||++|+|++ |..||...+..+....+...
T Consensus 156 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~------ 229 (269)
T cd05044 156 GLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAG------ 229 (269)
T ss_pred ccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhcC------
Confidence 9986543221 12244678999999999899999999999999999998 99999876555444333100
Q ss_pred HHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHh
Q 004954 642 EMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 714 (722)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~ 714 (722)
.....+ ...+..+.+||.+||+.+|.+||+++++++
T Consensus 230 ----------------------------~~~~~~---------~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 265 (269)
T cd05044 230 ----------------------------GRLQKP---------ENCPDKIYQLMTNCWAQDPSERPTFDRIQE 265 (269)
T ss_pred ----------------------------CccCCc---------ccchHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 000001 112356889999999999999999999985
No 354
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=4.4e-32 Score=285.17 Aligned_cols=245 Identities=22% Similarity=0.297 Sum_probs=193.5
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCc----EEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEE
Q 004954 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGV----DVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY 486 (722)
Q Consensus 413 ~~rY~i~~~LG~G~fG~Vy~a~d~~tg~----~vAvKil~~~~--~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~ 486 (722)
..+|++.+.||+|+||.||+|.++.+|. .+|+|.+.... .....+.+|+.+++.+. |+||+++++++.
T Consensus 6 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~ 79 (279)
T cd05057 6 ETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVD------HPHVVRLLGICL 79 (279)
T ss_pred HHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCC------CCCcceEEEEEe
Confidence 4689999999999999999999876665 58999887653 23355667888887764 789999999988
Q ss_pred ecCeEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEE
Q 004954 487 HLEHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKII 565 (722)
Q Consensus 487 ~~~~l~iVmEy~~-gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~ 565 (722)
. ...++||||+. ++|.+.+..... .+++..+..++.||+.||+|||+.||+|+||||+||+++. ++.+||+
T Consensus 80 ~-~~~~~v~e~~~~g~L~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~--~~~~kL~ 151 (279)
T cd05057 80 S-SQVQLITQLMPLGCLLDYVRNHKD-----NIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKT--PQHVKIT 151 (279)
T ss_pred c-CceEEEEecCCCCcHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcC--CCeEEEC
Confidence 7 78999999997 567776653322 2889999999999999999999999999999999999985 7789999
Q ss_pred ecCCcccccCCccc-----cccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCC
Q 004954 566 DLGSSCFQTDNLCL-----YVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPI 639 (722)
Q Consensus 566 DFGls~~~~~~~~~-----~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~~i~~~lg~~ 639 (722)
|||.+......... ..++..|+|||.+....++.++|+|||||++|++++ |+.||......++...+.....
T Consensus 152 dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~-- 229 (279)
T cd05057 152 DFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKGER-- 229 (279)
T ss_pred CCcccccccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCCCC--
Confidence 99998765432211 122567999999988889999999999999999998 9999988766555444321100
Q ss_pred cHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHh
Q 004954 640 DLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 714 (722)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~ 714 (722)
...| ...+..+.++|.+||..||.+|||+.++++
T Consensus 230 --------------------------------~~~~---------~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~ 263 (279)
T cd05057 230 --------------------------------LPQP---------PICTIDVYMVLVKCWMIDAESRPTFKELIN 263 (279)
T ss_pred --------------------------------CCCC---------CCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 0001 112356789999999999999999999874
No 355
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=4.1e-32 Score=282.60 Aligned_cols=238 Identities=20% Similarity=0.263 Sum_probs=184.9
Q ss_pred EeccCCCCceEEEEEC--CCCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEEE
Q 004954 421 YLGSAAFSKVFQAQDL--HTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCE 496 (722)
Q Consensus 421 ~LG~G~fG~Vy~a~d~--~tg~~vAvKil~~~~--~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~iVmE 496 (722)
.||+|+||.||+|.+. ..+..+|+|++.... ...+.+.+|+.+++.++ |+||+++++++. ....++|||
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~------h~~ii~~~~~~~-~~~~~lv~e 74 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLD------NPYIVRMIGVCE-AEALMLVME 74 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcC------CCCeEEEEEEEc-CCCeEEEEE
Confidence 3899999999999764 445679999987543 23455778888888874 689999999875 457899999
Q ss_pred cccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCcccccC
Q 004954 497 LLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTD 575 (722)
Q Consensus 497 y~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~~ 575 (722)
|+++ +|.+++.... ..+++..++.++.||+.||.|||++|++||||||+|||++. ++.+||+|||++.....
T Consensus 75 ~~~~~~L~~~l~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~--~~~~kl~dfg~~~~~~~ 147 (257)
T cd05115 75 MASGGPLNKFLSGKK-----DEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVN--QHYAKISDFGLSKALGA 147 (257)
T ss_pred eCCCCCHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcC--CCcEEeccCCccccccC
Confidence 9975 5665554322 23899999999999999999999999999999999999985 77899999999875433
Q ss_pred Ccc------ccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhh
Q 004954 576 NLC------LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQ 648 (722)
Q Consensus 576 ~~~------~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~ 648 (722)
... ...+++.|+|||.+.+..++.++|||||||++|+|++ |..||......+....+....
T Consensus 148 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~------------ 215 (257)
T cd05115 148 DDSYYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGK------------ 215 (257)
T ss_pred CccceeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCC------------
Confidence 211 1123567999999998889999999999999999996 999998766555443332110
Q ss_pred hhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhC
Q 004954 649 EIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 715 (722)
Q Consensus 649 ~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~H 715 (722)
....| ...++++.++|.+||+.+|++||++.++++.
T Consensus 216 ----------------------~~~~~---------~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~ 251 (257)
T cd05115 216 ----------------------RLDCP---------AECPPEMYALMKDCWIYKWEDRPNFAKVEER 251 (257)
T ss_pred ----------------------CCCCC---------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 00011 1234678899999999999999999999753
No 356
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=4.2e-32 Score=285.23 Aligned_cols=252 Identities=19% Similarity=0.246 Sum_probs=195.1
Q ss_pred ecCcEEEEEEeccCCCCceEEEEECC----CCcEEEEEEeecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEE
Q 004954 412 IAGRYYVTEYLGSAAFSKVFQAQDLH----TGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYF 485 (722)
Q Consensus 412 l~~rY~i~~~LG~G~fG~Vy~a~d~~----tg~~vAvKil~~~--~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f 485 (722)
-.++|++.+.||+|+||.||+|.+.. ++..|++|++... ......+.+|..+++.+. |+||+++++++
T Consensus 4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~------h~ni~~~~~~~ 77 (280)
T cd05043 4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLS------HQNILPILHVC 77 (280)
T ss_pred chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCC------CCCCCeEEEEE
Confidence 35789999999999999999999865 3688999988754 233455667777777664 78999999987
Q ss_pred Ee-cCeEEEEEEccc-cchHHHHhhhhcc--CCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCe
Q 004954 486 YH-LEHLFIVCELLR-ANLYEFQKFNQES--GGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCE 561 (722)
Q Consensus 486 ~~-~~~l~iVmEy~~-gsLl~~l~~~~~~--~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~ 561 (722)
.. ....+++++|+. ++|.+++...... .....+++..++.++.||+.||+|||+.+++|+||||+||+++. ++.
T Consensus 78 ~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~--~~~ 155 (280)
T cd05043 78 IEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDE--ELQ 155 (280)
T ss_pred ecCCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcC--CCc
Confidence 65 467899999997 5677766543221 11234899999999999999999999999999999999999985 788
Q ss_pred EEEEecCCcccccCCc-----cccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhh
Q 004954 562 IKIIDLGSSCFQTDNL-----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGM 635 (722)
Q Consensus 562 vkL~DFGls~~~~~~~-----~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~~i~~~ 635 (722)
+||+|||+++...... ....++..|+|||++.+..++.++|||||||++|++++ |+.||...+..++...+...
T Consensus 156 ~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~ 235 (280)
T cd05043 156 VKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDG 235 (280)
T ss_pred EEECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHcC
Confidence 9999999987543221 11234667999999999899999999999999999999 99999876655443332210
Q ss_pred cCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHh
Q 004954 636 LGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 714 (722)
Q Consensus 636 lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~ 714 (722)
. .++. ....++.+.++|.+||+.||++|||+.++++
T Consensus 236 ~------------------------------------~~~~-------~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 271 (280)
T cd05043 236 Y------------------------------------RLAQ-------PINCPDELFAVMACCWALDPEERPSFSQLVQ 271 (280)
T ss_pred C------------------------------------CCCC-------CCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 0 0000 0112356889999999999999999999985
No 357
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=3.1e-32 Score=284.54 Aligned_cols=240 Identities=19% Similarity=0.244 Sum_probs=177.8
Q ss_pred EEeccCCCCceEEEEECC------------CCcEEEEEEeecchh-hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEE
Q 004954 420 EYLGSAAFSKVFQAQDLH------------TGVDVCLKIIKNDKD-FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY 486 (722)
Q Consensus 420 ~~LG~G~fG~Vy~a~d~~------------tg~~vAvKil~~~~~-~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~ 486 (722)
+.||+|+||.||+|+... ....+++|++..... ....+.+|+.+++.++ ||||+++++++.
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~------hp~iv~~~~~~~ 74 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVS------HKHIVLLYGVCV 74 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCC------CCCEeeEEEEEe
Confidence 368999999999998532 233588898765432 2234555666666664 789999999999
Q ss_pred ecCeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCC-----Ce
Q 004954 487 HLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQR-----CE 561 (722)
Q Consensus 487 ~~~~l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~-----~~ 561 (722)
.....++||||+.++.++.+..... ..+++..++.++.||+.||+|||+.+|+||||||+|||++.... ..
T Consensus 75 ~~~~~~lv~e~~~~~~l~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~ 150 (262)
T cd05077 75 RDVENIMVEEFVEFGPLDLFMHRKS----DVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPF 150 (262)
T ss_pred cCCCCEEEEecccCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCce
Confidence 9999999999998765554433221 23889999999999999999999999999999999999975221 23
Q ss_pred EEEEecCCcccccCCccccccCCcccCchhhc-CCCCCchhhHHHHHHHHHHHH-hCCCCCCCChHHHHHHHHHhhcCCC
Q 004954 562 IKIIDLGSSCFQTDNLCLYVQSRSYRAPEVII-GLPYDQKIDLWSLGCILAELW-TGEVLFPNDAVVMILARIIGMLGPI 639 (722)
Q Consensus 562 vkL~DFGls~~~~~~~~~~~gt~~y~APE~l~-~~~~s~ksDIWSLGviL~ell-tG~~PF~~~~~~e~l~~i~~~lg~~ 639 (722)
++++|||++...... ....++..|+|||.+. +..++.++|||||||++|+|+ +|..||......+... +.
T Consensus 151 ~~l~d~g~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~-~~------ 222 (262)
T cd05077 151 IKLSDPGIPITVLSR-QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKER-FY------ 222 (262)
T ss_pred eEeCCCCCCccccCc-ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHH-HH------
Confidence 899999998654322 2345788899999987 467899999999999999998 5899887654322211 00
Q ss_pred cHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhC
Q 004954 640 DLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 715 (722)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~H 715 (722)
.. ... .. ......+.+||.+||+.||.+||++.++|++
T Consensus 223 ---------------~~------------~~~--~~---------~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~ 260 (262)
T cd05077 223 ---------------EG------------QCM--LV---------TPSCKELADLMTHCMNYDPNQRPFFRAIMRD 260 (262)
T ss_pred ---------------hc------------Ccc--CC---------CCChHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence 00 000 00 0113568899999999999999999999975
No 358
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=4.3e-32 Score=283.44 Aligned_cols=247 Identities=20% Similarity=0.253 Sum_probs=181.5
Q ss_pred EeccCCCCceEEEEEC--CCCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEEE
Q 004954 421 YLGSAAFSKVFQAQDL--HTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCE 496 (722)
Q Consensus 421 ~LG~G~fG~Vy~a~d~--~tg~~vAvKil~~~~--~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~iVmE 496 (722)
.||+|+||.||+|... .....+|+|.+.... .....+.+|+.+++.+ .|+||+++++.+......++|||
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l------~h~nii~~~~~~~~~~~~~lv~e 75 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYREL------NHPNVLQCLGQCIESIPYLLVLE 75 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhC------CCCCcceEEEEECCCCceEEEEE
Confidence 5899999999999643 244578888775432 2234556777777665 47899999999999999999999
Q ss_pred cccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCcccccC
Q 004954 497 LLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTD 575 (722)
Q Consensus 497 y~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~~ 575 (722)
|+.+ +|.+++...... .....++..++.++.||+.||+|||++||+||||||+|||++. ++.+||+|||++.....
T Consensus 76 ~~~~g~L~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~--~~~~kl~dfg~~~~~~~ 152 (269)
T cd05042 76 FCPLGDLKNYLRSNRGM-VAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTA--DLSVKIGDYGLALEQYP 152 (269)
T ss_pred eCCCCcHHHHHHhcccc-ccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecC--CCcEEEecccccccccc
Confidence 9985 677776544321 1223567788899999999999999999999999999999996 78899999999864322
Q ss_pred C-----ccccccCCcccCchhhcC-------CCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHH
Q 004954 576 N-----LCLYVQSRSYRAPEVIIG-------LPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLE 642 (722)
Q Consensus 576 ~-----~~~~~gt~~y~APE~l~~-------~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~~i~~~lg~~~~~ 642 (722)
. .....+++.|+|||++.. ..++.++|||||||++|+|++ |..||......+.+..+......
T Consensus 153 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~---- 228 (269)
T cd05042 153 EDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDI---- 228 (269)
T ss_pred chheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCc----
Confidence 1 122345677999999753 356789999999999999999 89999877655554443321100
Q ss_pred HHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhC
Q 004954 643 MLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 715 (722)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~H 715 (722)
.++.. ......+..+.+++..|+ .||++|||+++|++-
T Consensus 229 ------------------------------~~~~~----~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~ 266 (269)
T cd05042 229 ------------------------------KLPKP----QLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHEL 266 (269)
T ss_pred ------------------------------cCCCC----cccccCCHHHHHHHHHHh-cCcccccCHHHHHHH
Confidence 00000 001123456778999888 599999999999863
No 359
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.1e-33 Score=306.30 Aligned_cols=252 Identities=24% Similarity=0.324 Sum_probs=205.6
Q ss_pred eCceecCcEEEEEEeccCCCCceEEEEECCCC----cEEEEEEeec----chhhhHhHHHHHHHHHHhcccCCCCCCcee
Q 004954 408 LNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTG----VDVCLKIIKN----DKDFFDQSLDEIKLLKLVNKNDPADEHHIL 479 (722)
Q Consensus 408 ~~~~l~~rY~i~~~LG~G~fG~Vy~a~d~~tg----~~vAvKil~~----~~~~~~~~~~E~~il~~L~~~~~~~hpnIv 479 (722)
.+.+...+..+.++||+|+||.||+|..+..+ ..||+|..+. .......+++|.++++.++ |||||
T Consensus 151 ~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~------H~NVV 224 (474)
T KOG0194|consen 151 KWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLN------HPNVV 224 (474)
T ss_pred ccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCC------CCCEE
Confidence 34555667777799999999999999875542 2389999874 3456677889999999875 78999
Q ss_pred EEEEEEEecCeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccC
Q 004954 480 RLYDYFYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQ 558 (722)
Q Consensus 480 ~l~~~f~~~~~l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~ 558 (722)
++||+......++||||+|.| +|.++++.... .++..+...++.+.+.||+|||++++|||||-.+|+|++.
T Consensus 225 r~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~~~-----~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~-- 297 (474)
T KOG0194|consen 225 RFYGVAVLEEPLMLVMELCNGGSLDDYLKKNKK-----SLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSK-- 297 (474)
T ss_pred EEEEEEcCCCccEEEEEecCCCcHHHHHHhCCC-----CCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecC--
Confidence 999999999999999999985 78888886654 2899999999999999999999999999999999999995
Q ss_pred CCeEEEEecCCcccccCCc--c-ccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHh
Q 004954 559 RCEIKIIDLGSSCFQTDNL--C-LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIG 634 (722)
Q Consensus 559 ~~~vkL~DFGls~~~~~~~--~-~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~~i~~ 634 (722)
+..+||+|||+++....-. . ...-+..|+|||.+....++.++|||||||++||+++ |..||++....++...|..
T Consensus 298 ~~~vKISDFGLs~~~~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~ 377 (474)
T KOG0194|consen 298 KGVVKISDFGLSRAGSQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVK 377 (474)
T ss_pred CCeEEeCccccccCCcceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHh
Confidence 6778999999987654111 1 1134678999999999999999999999999999999 8889999998888877742
Q ss_pred hcCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHh
Q 004954 635 MLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 714 (722)
Q Consensus 635 ~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~ 714 (722)
..- +..+|. ..+..+..++.+|+..+|++|||+.++.+
T Consensus 378 ~~~---------------------------------r~~~~~---------~~p~~~~~~~~~c~~~~p~~R~tm~~i~~ 415 (474)
T KOG0194|consen 378 NGY---------------------------------RMPIPS---------KTPKELAKVMKQCWKKDPEDRPTMSTIKK 415 (474)
T ss_pred cCc---------------------------------cCCCCC---------CCHHHHHHHHHHhccCChhhccCHHHHHH
Confidence 111 111111 23466889999999999999999998864
No 360
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=3.2e-32 Score=281.66 Aligned_cols=237 Identities=22% Similarity=0.280 Sum_probs=181.2
Q ss_pred EEeccCCCCceEEEEECCCC----------cEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 004954 420 EYLGSAAFSKVFQAQDLHTG----------VDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (722)
Q Consensus 420 ~~LG~G~fG~Vy~a~d~~tg----------~~vAvKil~~~~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (722)
+.||+|+||.||+|.+..++ ..+++|++.........+.+|+.+++.+. ||||+++++++.. .
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~-~ 73 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLS------HKHLVKLYGVCVR-D 73 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCC------CcchhheeeEEec-C
Confidence 36999999999999987776 45888887665443456667777777664 7899999999988 7
Q ss_pred eEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCC-----eEE
Q 004954 490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRC-----EIK 563 (722)
Q Consensus 490 ~l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~-----~vk 563 (722)
..++||||+.+ +|.+++..... .+++..+..++.||+.||+|||++||+||||||+|||++..... .+|
T Consensus 74 ~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~k 148 (259)
T cd05037 74 ENIMVEEYVKFGPLDVFLHREKN-----NVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIK 148 (259)
T ss_pred CcEEEEEcCCCCcHHHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEE
Confidence 78999999985 55555553321 38899999999999999999999999999999999999863211 799
Q ss_pred EEecCCcccccCCccccccCCcccCchhhcCC--CCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCc
Q 004954 564 IIDLGSSCFQTDNLCLYVQSRSYRAPEVIIGL--PYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPID 640 (722)
Q Consensus 564 L~DFGls~~~~~~~~~~~gt~~y~APE~l~~~--~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~~i~~~lg~~~ 640 (722)
|+|||++..... .....++..|+|||++.+. .++.++|||||||++|+|++ |..||............. .
T Consensus 149 l~Dfg~a~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~-~----- 221 (259)
T cd05037 149 LSDPGIPITVLS-REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQ-D----- 221 (259)
T ss_pred eCCCCccccccc-ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHh-c-----
Confidence 999999876544 2234567789999999876 78999999999999999999 588886543222111100 0
Q ss_pred HHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHh
Q 004954 641 LEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 714 (722)
Q Consensus 641 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~ 714 (722)
....+. .....+.+||.+||..+|.+|||+.++++
T Consensus 222 ------------------------------~~~~~~---------~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 256 (259)
T cd05037 222 ------------------------------QHRLPM---------PDCAELANLINQCWTYDPTKRPSFRAILR 256 (259)
T ss_pred ------------------------------CCCCCC---------CCchHHHHHHHHHhccChhhCCCHHHHHH
Confidence 000000 00156889999999999999999999986
No 361
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2e-34 Score=336.33 Aligned_cols=251 Identities=31% Similarity=0.436 Sum_probs=204.2
Q ss_pred ecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec
Q 004954 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 488 (722)
Q Consensus 412 l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~---~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~ 488 (722)
+.-||+-..+||.|.||.||.|.+..+|+..|+|-++.. ....+.+.+|.+++..++ |||+|++|++-.+.
T Consensus 1233 V~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~ln------HpNlV~YyGVEvHR 1306 (1509)
T KOG4645|consen 1233 VTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLN------HPNLVRYYGVEVHR 1306 (1509)
T ss_pred ceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhcc------CccccccCceeecH
Confidence 456888899999999999999999999999999977542 344567778888998886 68999999999999
Q ss_pred CeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEec
Q 004954 489 EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDL 567 (722)
Q Consensus 489 ~~l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DF 567 (722)
+..+|.||||.+ +|.+++..... ..+...+.+..|++.||+|||+.|||||||||.||+++. +|.+|++||
T Consensus 1307 ekv~IFMEyC~~GsLa~ll~~gri------~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~--~g~iK~~DF 1378 (1509)
T KOG4645|consen 1307 EKVYIFMEYCEGGSLASLLEHGRI------EDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDF--NGLIKYGDF 1378 (1509)
T ss_pred HHHHHHHHHhccCcHHHHHHhcch------hhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeec--CCcEEeecc
Confidence 999999999975 66666654432 667778889999999999999999999999999999996 789999999
Q ss_pred CCcccccCCc-------cccccCCcccCchhhcCC---CCCchhhHHHHHHHHHHHHhCCCCCCCCh-HHHHHHHHHhhc
Q 004954 568 GSSCFQTDNL-------CLYVQSRSYRAPEVIIGL---PYDQKIDLWSLGCILAELWTGEVLFPNDA-VVMILARIIGML 636 (722)
Q Consensus 568 Gls~~~~~~~-------~~~~gt~~y~APE~l~~~---~~s~ksDIWSLGviL~elltG~~PF~~~~-~~e~l~~i~~~l 636 (722)
|.|....... ....||+.|||||++.+. +-..+.|||||||++.||+||+.||...+ ...++.++...
T Consensus 1379 Gsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~g- 1457 (1509)
T KOG4645|consen 1379 GSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAG- 1457 (1509)
T ss_pred cceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhcc-
Confidence 9987654432 346899999999999764 46679999999999999999999997643 33444443211
Q ss_pred CCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCC
Q 004954 637 GPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHP 716 (722)
Q Consensus 637 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HP 716 (722)
-...+|+. .+.+-++||.+||+.||++|+++.|+|+|-
T Consensus 1458 ---------------------------------h~Pq~P~~---------ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~ 1495 (1509)
T KOG4645|consen 1458 ---------------------------------HKPQIPER---------LSSEGRDFLEHCLEQDPKMRWTASQLLEHA 1495 (1509)
T ss_pred ---------------------------------CCCCCchh---------hhHhHHHHHHHHHhcCchhhhHHHHHHHhh
Confidence 11123332 235567999999999999999999999998
Q ss_pred CCC
Q 004954 717 WLQ 719 (722)
Q Consensus 717 wf~ 719 (722)
|-+
T Consensus 1496 f~~ 1498 (1509)
T KOG4645|consen 1496 FGK 1498 (1509)
T ss_pred ccc
Confidence 754
No 362
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=7.9e-32 Score=277.84 Aligned_cols=239 Identities=24% Similarity=0.345 Sum_probs=187.0
Q ss_pred EEeccCCCCceEEEEECCCCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEEEc
Q 004954 420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCEL 497 (722)
Q Consensus 420 ~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~--~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~iVmEy 497 (722)
++||+|+||.||++.. .++..+|+|++.... .....+.+|+.+++.+ .||||+++++.+...+..++||||
T Consensus 1 ~~ig~g~~g~vy~~~~-~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l------~h~~i~~~~~~~~~~~~~~lv~e~ 73 (250)
T cd05085 1 ELLGKGNFGEVFKGTL-KDKTPVAVKTCKEDLPQELKIKFLSEARILKQY------DHPNIVKLIGVCTQRQPIYIVMEL 73 (250)
T ss_pred CccCCCCCceEEEEEe-cCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhC------CCCCcCeEEEEEecCCccEEEEEC
Confidence 3699999999999985 468899999987543 2233566777777766 478999999999999999999999
Q ss_pred ccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCcccccCC
Q 004954 498 LRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDN 576 (722)
Q Consensus 498 ~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~~~ 576 (722)
+.+ +|.+++.... ..+.+..+..++.|++.||.|||+.|++|+||||+||+++. ++.++|+|||++......
T Consensus 74 ~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~--~~~~~l~d~g~~~~~~~~ 146 (250)
T cd05085 74 VPGGDFLSFLRKKK-----DELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGE--NNVLKISDFGMSRQEDDG 146 (250)
T ss_pred CCCCcHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcC--CCeEEECCCccceecccc
Confidence 975 5666554322 12788999999999999999999999999999999999985 788999999998654332
Q ss_pred cc----ccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhh
Q 004954 577 LC----LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIY 651 (722)
Q Consensus 577 ~~----~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~~~~ 651 (722)
.. ....++.|+|||++.+..++.++||||||+++|+|++ |..||...........+....
T Consensus 147 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~--------------- 211 (250)
T cd05085 147 IYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGY--------------- 211 (250)
T ss_pred ccccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCC---------------
Confidence 21 1233567999999998889999999999999999998 999998765544443332100
Q ss_pred hhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhC
Q 004954 652 KYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 715 (722)
Q Consensus 652 ~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~H 715 (722)
....+ ...+..+.+|+.+||..+|++||++.++++.
T Consensus 212 -------------------~~~~~---------~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 247 (250)
T cd05085 212 -------------------RMSCP---------QKCPDDVYKVMQRCWDYKPENRPKFSELQKE 247 (250)
T ss_pred -------------------CCCCC---------CCCCHHHHHHHHHHcccCcccCCCHHHHHHH
Confidence 00001 1124568899999999999999999999864
No 363
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=7.5e-32 Score=283.88 Aligned_cols=262 Identities=21% Similarity=0.279 Sum_probs=189.7
Q ss_pred CcEEEEEEeccCCCCceEEEE----ECCCCcEEEEEEeecch-hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQ----DLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 488 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~----d~~tg~~vAvKil~~~~-~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~ 488 (722)
.+|++++.||+|+||.||++. +..+++.||+|.+.... .....+.+|+++++.++ ||||+++++++...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~------h~~iv~~~~~~~~~ 77 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQ------HDNIVKYKGVCYSA 77 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCC------CCCeeEEEEEEccC
Confidence 579999999999999999997 45678999999987543 33456678888888774 78999999987543
Q ss_pred --CeEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEE
Q 004954 489 --EHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKII 565 (722)
Q Consensus 489 --~~l~iVmEy~~-gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~ 565 (722)
..+++||||+. ++|.+++.... ..+++..++.++.||+.||+|||+.||+||||||+||+++. ++.++|+
T Consensus 78 ~~~~~~lv~e~~~~~~L~~~l~~~~-----~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~--~~~~~l~ 150 (284)
T cd05081 78 GRRNLRLVMEYLPYGSLRDYLQKHR-----ERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVES--ENRVKIG 150 (284)
T ss_pred CCCceEEEEEecCCCCHHHHHHhcC-----cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECC--CCeEEEC
Confidence 46899999997 57777765332 12889999999999999999999999999999999999986 7789999
Q ss_pred ecCCcccccCCccc------cccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCC
Q 004954 566 DLGSSCFQTDNLCL------YVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPI 639 (722)
Q Consensus 566 DFGls~~~~~~~~~------~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~ 639 (722)
|||++......... ..++..|+|||++.+..++.++|||||||++|+|++|..|+..... .....+ +..
T Consensus 151 dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~-~~~~~~----~~~ 225 (284)
T cd05081 151 DFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPA-EFMRMM----GND 225 (284)
T ss_pred CCcccccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcch-hhhhhc----ccc
Confidence 99998765432211 1234459999999988899999999999999999999887654321 111111 110
Q ss_pred cHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhC
Q 004954 640 DLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 715 (722)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~H 715 (722)
..... ....+.+... .. ...+. ....+..+.+||.+||+.+|++|||+.++++.
T Consensus 226 ~~~~~-~~~~~~~~~~------------~~--~~~~~-------~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 279 (284)
T cd05081 226 KQGQM-IVYHLIELLK------------NN--GRLPA-------PPGCPAEIYAIMKECWNNDPSQRPSFSELALQ 279 (284)
T ss_pred ccccc-chHHHHHHHh------------cC--CcCCC-------CCCCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence 00000 0000000000 00 00110 11234678999999999999999999999863
No 364
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=5.1e-32 Score=284.99 Aligned_cols=239 Identities=20% Similarity=0.239 Sum_probs=176.6
Q ss_pred EeccCCCCceEEEEECCC------------------------CcEEEEEEeecchh-hhHhHHHHHHHHHHhcccCCCCC
Q 004954 421 YLGSAAFSKVFQAQDLHT------------------------GVDVCLKIIKNDKD-FFDQSLDEIKLLKLVNKNDPADE 475 (722)
Q Consensus 421 ~LG~G~fG~Vy~a~d~~t------------------------g~~vAvKil~~~~~-~~~~~~~E~~il~~L~~~~~~~h 475 (722)
.||+|+||.||+|....+ ...|++|++..... ....+.+|..+++.+ .|
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l------~h 75 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQV------SH 75 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcC------CC
Confidence 599999999999974322 24588898865432 223445555555554 47
Q ss_pred CceeEEEEEEEecCeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEc
Q 004954 476 HHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIK 555 (722)
Q Consensus 476 pnIv~l~~~f~~~~~l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~ 555 (722)
|||+++++++......++||||+.++.++.+.... ...+++..+..++.||+.||+|||++||+||||||+|||++
T Consensus 76 ~niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~ 151 (274)
T cd05076 76 IHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKE----KGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLA 151 (274)
T ss_pred CCeeeEEEEEEeCCceEEEEecCCCCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEe
Confidence 89999999999999999999999875444433221 12378899999999999999999999999999999999997
Q ss_pred ccC-----CCeEEEEecCCcccccCCccccccCCcccCchhhcC-CCCCchhhHHHHHHHHHHHH-hCCCCCCCChHHHH
Q 004954 556 SYQ-----RCEIKIIDLGSSCFQTDNLCLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELW-TGEVLFPNDAVVMI 628 (722)
Q Consensus 556 ~~~-----~~~vkL~DFGls~~~~~~~~~~~gt~~y~APE~l~~-~~~s~ksDIWSLGviL~ell-tG~~PF~~~~~~e~ 628 (722)
... ...++|+|||.+...... ....++..|+|||.+.+ ..++.++|||||||++|+|+ +|..||......+.
T Consensus 152 ~~~~~~~~~~~~kl~d~g~~~~~~~~-~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~ 230 (274)
T cd05076 152 RLGLAEGTSPFIKLSDPGVSFTALSR-EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEK 230 (274)
T ss_pred ccCcccCccceeeecCCccccccccc-cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHH
Confidence 522 235899999987544322 22356788999999875 56889999999999999995 69999976544332
Q ss_pred HHHHHhhcCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcC
Q 004954 629 LARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPT 708 (722)
Q Consensus 629 l~~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpT 708 (722)
...+.. ...+|. .....+.++|.+||+.+|++|||
T Consensus 231 ~~~~~~------------------------------------~~~~~~---------~~~~~~~~li~~cl~~~p~~Rps 265 (274)
T cd05076 231 ERFYEK------------------------------------KHRLPE---------PSCKELATLISQCLTYEPTQRPS 265 (274)
T ss_pred HHHHHh------------------------------------ccCCCC---------CCChHHHHHHHHHcccChhhCcC
Confidence 211100 000111 11245889999999999999999
Q ss_pred HHHHHhC
Q 004954 709 AREALDH 715 (722)
Q Consensus 709 a~ElL~H 715 (722)
+.++|++
T Consensus 266 ~~~il~~ 272 (274)
T cd05076 266 FRTILRD 272 (274)
T ss_pred HHHHHHh
Confidence 9999975
No 365
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=1.3e-32 Score=286.08 Aligned_cols=239 Identities=19% Similarity=0.301 Sum_probs=180.2
Q ss_pred EEeccCCCCceEEEEECCCCc-------EEEEEEeecch-hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 004954 420 EYLGSAAFSKVFQAQDLHTGV-------DVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (722)
Q Consensus 420 ~~LG~G~fG~Vy~a~d~~tg~-------~vAvKil~~~~-~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (722)
+.||+|+||.||+|.+...+. .+|+|.+.... ...+.+..|..+++.+ .||||+++++++......
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~------~h~~iv~~~~~~~~~~~~ 74 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQL------SHKHLVLNYGVCVCGDES 74 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhC------CCCChhheeeEEEeCCCc
Confidence 369999999999999865544 38888876433 2334566677777665 478999999999999999
Q ss_pred EEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCC------CeEEE
Q 004954 492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQR------CEIKI 564 (722)
Q Consensus 492 ~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~------~~vkL 564 (722)
++||||+.+ +|..++..... .+++..+..++.||+.||+|||+.||+||||||+||+++.+.. ..++|
T Consensus 75 ~lv~e~~~~g~L~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l 149 (258)
T cd05078 75 IMVQEYVKFGSLDTYLKKNKN-----LINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKL 149 (258)
T ss_pred EEEEecCCCCcHHHHHhcCCC-----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEe
Confidence 999999986 56666554322 3788899999999999999999999999999999999986322 24899
Q ss_pred EecCCcccccCCccccccCCcccCchhhcC-CCCCchhhHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHhhcCCCcHH
Q 004954 565 IDLGSSCFQTDNLCLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTG-EVLFPNDAVVMILARIIGMLGPIDLE 642 (722)
Q Consensus 565 ~DFGls~~~~~~~~~~~gt~~y~APE~l~~-~~~s~ksDIWSLGviL~elltG-~~PF~~~~~~e~l~~i~~~lg~~~~~ 642 (722)
+|||.+..... .....+++.|+|||++.+ ..++.++|||||||++|+|++| .+||............. .
T Consensus 150 ~d~g~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~~~~-~------- 220 (258)
T cd05078 150 SDPGISITVLP-KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQFYE-D------- 220 (258)
T ss_pred cccccccccCC-chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHHHHH-c-------
Confidence 99998865443 223567889999999986 4578999999999999999998 56665443322111100 0
Q ss_pred HHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhC
Q 004954 643 MLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 715 (722)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~H 715 (722)
...+|. .....+.+||.+||+.||++|||++++++.
T Consensus 221 ----------------------------~~~~~~---------~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 256 (258)
T cd05078 221 ----------------------------RHQLPA---------PKWTELANLINQCMDYEPDFRPSFRAIIRD 256 (258)
T ss_pred ----------------------------cccCCC---------CCcHHHHHHHHHHhccChhhCCCHHHHHHh
Confidence 001111 112458899999999999999999999974
No 366
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=9.7e-32 Score=281.02 Aligned_cols=246 Identities=20% Similarity=0.218 Sum_probs=181.9
Q ss_pred EeccCCCCceEEEEEC--CCCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEEE
Q 004954 421 YLGSAAFSKVFQAQDL--HTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCE 496 (722)
Q Consensus 421 ~LG~G~fG~Vy~a~d~--~tg~~vAvKil~~~~--~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~iVmE 496 (722)
.||+|+||.||+|.+. .++..+|+|.++... .....+.+|+.+++.++ ||||+++++.+......++|||
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~~~~~~~lv~e 75 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQ------HSNLLQCLGQCTEVTPYLLVME 75 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCC------CCCEeeEEEEEcCCCCcEEEEE
Confidence 5899999999999854 456789999887543 22345667787777774 7899999999999999999999
Q ss_pred ccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCcccccC
Q 004954 497 LLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTD 575 (722)
Q Consensus 497 y~~-gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~~ 575 (722)
|+. ++|.+++...... .....++..++.++.|++.||+|||+.+++|+||||+||+++. ++.++|+|||.+.....
T Consensus 76 ~~~~g~L~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~--~~~~kL~dfg~~~~~~~ 152 (269)
T cd05087 76 FCPLGDLKGYLRSCRKA-ELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTA--DLTVKIGDYGLSHNKYK 152 (269)
T ss_pred CCCCCcHHHHHHHhhhc-ccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcC--CCcEEECCccccccccC
Confidence 998 4676766543321 1223667788899999999999999999999999999999986 78899999999865432
Q ss_pred Cc-----cccccCCcccCchhhcCC-------CCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHH
Q 004954 576 NL-----CLYVQSRSYRAPEVIIGL-------PYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLE 642 (722)
Q Consensus 576 ~~-----~~~~gt~~y~APE~l~~~-------~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~~i~~~lg~~~~~ 642 (722)
.. ....+++.|+|||++.+. .++.++||||||+++|+|++ |+.||......+.....+...
T Consensus 153 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~------ 226 (269)
T cd05087 153 EDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQ------ 226 (269)
T ss_pred cceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcc------
Confidence 21 123467789999998642 35789999999999999996 999997765444332221000
Q ss_pred HHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHh
Q 004954 643 MLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 714 (722)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~ 714 (722)
......|.. ....+..+.++|++|+ .+|.+|||++||+.
T Consensus 227 --------------------------~~~~~~~~~------~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~ 265 (269)
T cd05087 227 --------------------------QLKLPKPRL------KLPLSDRWYEVMQFCW-LQPEQRPSAEEVHL 265 (269)
T ss_pred --------------------------cCCCCCCcc------CCCCChHHHHHHHHHh-cCcccCCCHHHHHH
Confidence 000000100 0112355889999998 68999999999985
No 367
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=7e-32 Score=281.90 Aligned_cols=249 Identities=19% Similarity=0.255 Sum_probs=189.2
Q ss_pred EEEEEEeccCCCCceEEEEEC---CCCcEEEEEEeecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 004954 416 YYVTEYLGSAAFSKVFQAQDL---HTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (722)
Q Consensus 416 Y~i~~~LG~G~fG~Vy~a~d~---~tg~~vAvKil~~~---~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (722)
|++.+.||+|+||.||+|.+. .+++.+|||++... ....+++.+|+++++.++ ||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~------h~~i~~~~~~~~~~~ 74 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFD------HPNVIKLIGVSLRSR 74 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCC------CCCcceEEEEEccCC
Confidence 677889999999999999864 46789999998753 233455677887777664 789999999887542
Q ss_pred ------eEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeE
Q 004954 490 ------HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI 562 (722)
Q Consensus 490 ------~l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~v 562 (722)
..+++++|+.+ ++..++...........+++..++.++.||+.||+|||+.||+||||||+||+++. ++.+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~--~~~~ 152 (273)
T cd05074 75 AKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNE--NMTV 152 (273)
T ss_pred CCCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcC--CCCE
Confidence 24788999974 55555543222222234788999999999999999999999999999999999985 7889
Q ss_pred EEEecCCcccccCCc-----cccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhc
Q 004954 563 KIIDLGSSCFQTDNL-----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGML 636 (722)
Q Consensus 563 kL~DFGls~~~~~~~-----~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~~i~~~l 636 (722)
||+|||++....... ....+++.|++||.+.+..++.++|||||||++|+|++ |++||......+....+....
T Consensus 153 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~ 232 (273)
T cd05074 153 CVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGN 232 (273)
T ss_pred EECcccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcCC
Confidence 999999987653221 12234577999999998889999999999999999999 899998766554443332100
Q ss_pred CCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhC
Q 004954 637 GPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 715 (722)
Q Consensus 637 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~H 715 (722)
.. ..+ ...+..+.+++.+||+.+|++|||+.+++++
T Consensus 233 --------------------------------~~--~~~---------~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~ 268 (273)
T cd05074 233 --------------------------------RL--KQP---------PDCLEDVYELMCQCWSPEPKCRPSFQHLRDQ 268 (273)
T ss_pred --------------------------------cC--CCC---------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 00 000 0123568899999999999999999999864
No 368
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=3.1e-32 Score=287.30 Aligned_cols=260 Identities=22% Similarity=0.270 Sum_probs=190.3
Q ss_pred cEEEEEEeccCCCCceEEEEE----CCCCcEEEEEEeecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec
Q 004954 415 RYYVTEYLGSAAFSKVFQAQD----LHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 488 (722)
Q Consensus 415 rY~i~~~LG~G~fG~Vy~a~d----~~tg~~vAvKil~~~--~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~ 488 (722)
-|++++.||+|+||.||+++. ..+++.||+|.++.. ......+.+|+.+++.+. ||||+++++++...
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~ 78 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLY------HENIVKYKGICTED 78 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCC------CCCeeeeeeEEecC
Confidence 478999999999999999974 467889999998744 233456778888888774 78999999998875
Q ss_pred --CeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEE
Q 004954 489 --EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKII 565 (722)
Q Consensus 489 --~~l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~ 565 (722)
...++||||+.+ +|.+++.... ..+++..+..++.||+.||+|||++|++||||||+||+++. ++.++|+
T Consensus 79 ~~~~~~lv~e~~~g~~L~~~l~~~~-----~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~--~~~~~l~ 151 (284)
T cd05079 79 GGNGIKLIMEFLPSGSLKEYLPRNK-----NKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVES--EHQVKIG 151 (284)
T ss_pred CCCceEEEEEccCCCCHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcC--CCCEEEC
Confidence 578999999975 5666654321 13789999999999999999999999999999999999985 7789999
Q ss_pred ecCCcccccCCc------cccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCC
Q 004954 566 DLGSSCFQTDNL------CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPI 639 (722)
Q Consensus 566 DFGls~~~~~~~------~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~ 639 (722)
|||++....... ....++..|+|||++.+..++.++|||||||++|+|++++.|+.... . .+.+..++.
T Consensus 152 dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~--~---~~~~~~~~~ 226 (284)
T cd05079 152 DFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPM--T---LFLKMIGPT 226 (284)
T ss_pred CCccccccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCcccc--c---hhhhhcccc
Confidence 999987544321 12345667999999998889999999999999999999887654321 1 111222222
Q ss_pred cHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhC
Q 004954 640 DLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 715 (722)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~H 715 (722)
..+..... ..+.. .......++ ...+..+.+||.+||+.||.+|||+.+++++
T Consensus 227 ~~~~~~~~--~~~~~------------~~~~~~~~~---------~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 279 (284)
T cd05079 227 HGQMTVTR--LVRVL------------EEGKRLPRP---------PNCPEEVYQLMRKCWEFQPSKRTTFQNLIEG 279 (284)
T ss_pred cccccHHH--HHHHH------------HcCccCCCC---------CCCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence 11110000 00000 000000011 1234678999999999999999999999874
No 369
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=9.7e-32 Score=279.13 Aligned_cols=240 Identities=20% Similarity=0.285 Sum_probs=179.8
Q ss_pred EEeccCCCCceEEEEECC---CCcEEEEEEeecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEE-ecCeEEE
Q 004954 420 EYLGSAAFSKVFQAQDLH---TGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY-HLEHLFI 493 (722)
Q Consensus 420 ~~LG~G~fG~Vy~a~d~~---tg~~vAvKil~~~--~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~-~~~~l~i 493 (722)
+.||+|+||.||+|.+.. .+..+|+|.+... ......+.+|+.+++.+ +||||+++++++. ..+..++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l------~h~~iv~~~~~~~~~~~~~~l 74 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDF------SHPNVLSLLGICLPSEGSPLV 74 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccC------CCCCcceEEEEeecCCCCcEE
Confidence 368999999999998643 3467999987542 22334556676666655 4789999999776 4556889
Q ss_pred EEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCccc
Q 004954 494 VCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF 572 (722)
Q Consensus 494 VmEy~~-gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~ 572 (722)
||||+. ++|.+++..... .+++..+..++.|++.||.|||+.+++||||||+|||++. ++.+||+|||++..
T Consensus 75 v~e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~--~~~~kl~dfg~~~~ 147 (262)
T cd05058 75 VLPYMKHGDLRNFIRSETH-----NPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDE--SFTVKVADFGLARD 147 (262)
T ss_pred EEecCCCCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcC--CCcEEECCcccccc
Confidence 999997 467776653221 1567778889999999999999999999999999999986 77899999999865
Q ss_pred ccCC-------ccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHHHH
Q 004954 573 QTDN-------LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEML 644 (722)
Q Consensus 573 ~~~~-------~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~~i~~~lg~~~~~~~ 644 (722)
.... .....+++.|+|||.+.+..++.++|||||||++|+|++ |.+||...+..+....+....
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~-------- 219 (262)
T cd05058 148 IYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGR-------- 219 (262)
T ss_pred ccCCcceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCC--------
Confidence 4321 112345678999999998899999999999999999999 577787655444333221100
Q ss_pred hhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhC
Q 004954 645 MQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 715 (722)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~H 715 (722)
....+ ...+..+.+++.+||+.+|++||++.++++.
T Consensus 220 --------------------------~~~~~---------~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~ 255 (262)
T cd05058 220 --------------------------RLLQP---------EYCPDPLYEVMLSCWHPKPEMRPTFSELVSR 255 (262)
T ss_pred --------------------------CCCCC---------CcCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence 00001 1123568899999999999999999999864
No 370
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=1e-31 Score=286.57 Aligned_cols=246 Identities=20% Similarity=0.248 Sum_probs=188.3
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCc----EEEEEEeecchh--hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEE
Q 004954 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGV----DVCLKIIKNDKD--FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY 486 (722)
Q Consensus 413 ~~rY~i~~~LG~G~fG~Vy~a~d~~tg~----~vAvKil~~~~~--~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~ 486 (722)
..+|++.+.||+|+||.||++.+..+|+ .+|+|++..... ....+.+|+.+++.+. ||||+++++.+.
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~------h~niv~~~~~~~ 79 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMD------HPHLVRLLGVCL 79 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCC------CCCcccEEEEEc
Confidence 4678999999999999999999877776 568888765432 2234566777766654 789999999987
Q ss_pred ecCeEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEE
Q 004954 487 HLEHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKII 565 (722)
Q Consensus 487 ~~~~l~iVmEy~~-gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~ 565 (722)
.. ..++|+||+. |++.+++..... .+++..+..++.||+.||.|||++||+|+||||+||+++. ++.+||+
T Consensus 80 ~~-~~~~v~e~~~~g~l~~~~~~~~~-----~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~--~~~~kL~ 151 (303)
T cd05110 80 SP-TIQLVTQLMPHGCLLDYVHEHKD-----NIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKS--PNHVKIT 151 (303)
T ss_pred CC-CceeeehhcCCCCHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecC--CCceEEc
Confidence 54 4678999997 567777654321 2788899999999999999999999999999999999985 6789999
Q ss_pred ecCCcccccCCc-----cccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCC
Q 004954 566 DLGSSCFQTDNL-----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPI 639 (722)
Q Consensus 566 DFGls~~~~~~~-----~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~~i~~~lg~~ 639 (722)
|||++....... ....++..|+|||.+.+..++.++|||||||++|+|++ |..||.+.........+...
T Consensus 152 Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~~~---- 227 (303)
T cd05110 152 DFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKG---- 227 (303)
T ss_pred cccccccccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCC----
Confidence 999987644321 12234678999999999999999999999999999997 99999775443332221100
Q ss_pred cHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhC
Q 004954 640 DLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 715 (722)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~H 715 (722)
...+. ....+..+.++|.+||..+|++||++.++++.
T Consensus 228 --------------------------------~~~~~-------~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~ 264 (303)
T cd05110 228 --------------------------------ERLPQ-------PPICTIDVYMVMVKCWMIDADSRPKFKELAAE 264 (303)
T ss_pred --------------------------------CCCCC-------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 00000 01123568899999999999999999998864
No 371
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=100.00 E-value=5.9e-32 Score=312.17 Aligned_cols=274 Identities=21% Similarity=0.244 Sum_probs=175.5
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCC----CcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEE----
Q 004954 413 AGRYYVTEYLGSAAFSKVFQAQDLHT----GVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDY---- 484 (722)
Q Consensus 413 ~~rY~i~~~LG~G~fG~Vy~a~d~~t----g~~vAvKil~~~~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~---- 484 (722)
.++|.+.+.||+|+||.||+|.+..+ +..||+|.+..... .|..+..++++.. +.++..++..
T Consensus 131 ~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~------~e~~~~e~l~~~~---~~~~~~~~~~~~~~ 201 (566)
T PLN03225 131 KDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA------VEIWMNERVRRAC---PNSCADFVYGFLEP 201 (566)
T ss_pred cCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch------hHHHHHHHHHhhc---hhhHHHHHHhhhcc
Confidence 46899999999999999999999888 99999998764321 1222222222110 1111111111
Q ss_pred --EEecCeEEEEEEcccc-chHHHHhhhhcc--------------CCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccC
Q 004954 485 --FYHLEHLFIVCELLRA-NLYEFQKFNQES--------------GGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDL 547 (722)
Q Consensus 485 --f~~~~~l~iVmEy~~g-sLl~~l~~~~~~--------------~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDL 547 (722)
.......++||||+.+ +|.+++...... ..........+..++.||+.||.|||+.+|+||||
T Consensus 202 ~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDL 281 (566)
T PLN03225 202 VSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDV 281 (566)
T ss_pred cccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcC
Confidence 2345679999999975 566666532110 00011223456789999999999999999999999
Q ss_pred CCCceEEcccCCCeEEEEecCCcccccCC----ccccccCCcccCchhhcCC----------------------CCCchh
Q 004954 548 KPENILIKSYQRCEIKIIDLGSSCFQTDN----LCLYVQSRSYRAPEVIIGL----------------------PYDQKI 601 (722)
Q Consensus 548 Kp~NILl~~~~~~~vkL~DFGls~~~~~~----~~~~~gt~~y~APE~l~~~----------------------~~s~ks 601 (722)
||+|||++. .++.+||+|||++...... .....+++.|+|||.+... .+..++
T Consensus 282 KP~NILl~~-~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~ 360 (566)
T PLN03225 282 KPQNIIFSE-GSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRF 360 (566)
T ss_pred CHHHEEEeC-CCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCc
Confidence 999999984 3578999999999754322 2346789999999976432 233456
Q ss_pred hHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhh
Q 004954 602 DLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLE 681 (722)
Q Consensus 602 DIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~ 681 (722)
|||||||+||||+++..|+.. ....+.++....+. +...|.. ..... ..+......
T Consensus 361 DVwSlGviL~el~~~~~~~~~--~~~~~~~~l~~~~~-~~~~~~~------~~~~~---------------~~~~~~~~~ 416 (566)
T PLN03225 361 DIYSAGLIFLQMAFPNLRSDS--NLIQFNRQLKRNDY-DLVAWRK------LVEPR---------------ASPDLRRGF 416 (566)
T ss_pred ccHHHHHHHHHHHhCcCCCch--HHHHHHHHHHhcCC-cHHHHHH------hhccc---------------cchhhhhhh
Confidence 999999999999997766432 22333333322221 1111100 00000 000000000
Q ss_pred hhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCCC
Q 004954 682 HHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 720 (722)
Q Consensus 682 ~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~~ 720 (722)
...........+||.+||+.||++|||+.++|+||||+.
T Consensus 417 ~~~d~~~~~~~dLi~~mL~~dP~kR~ta~e~L~Hpff~~ 455 (566)
T PLN03225 417 EVLDLDGGAGWELLKSMMRFKGRQRISAKAALAHPYFDR 455 (566)
T ss_pred hhccccchHHHHHHHHHccCCcccCCCHHHHhCCcCcCC
Confidence 001112345679999999999999999999999999975
No 372
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=8e-33 Score=321.72 Aligned_cols=253 Identities=29% Similarity=0.408 Sum_probs=189.6
Q ss_pred ecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe--
Q 004954 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH-- 487 (722)
Q Consensus 412 l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~--~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~-- 487 (722)
-...|..++.||+||||.||+++++-+|+.||||.+... .....++.+|+++|.+|+ |||||++|..+..
T Consensus 477 Y~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLn------HpNVVRYysAWVEs~ 550 (1351)
T KOG1035|consen 477 YLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLN------HPNVVRYYSAWVEST 550 (1351)
T ss_pred HhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcC------CcceeeeehhhhccC
Confidence 345688899999999999999999999999999998765 445667888999999887 5788888766410
Q ss_pred --------------------------------------------------------------------------------
Q 004954 488 -------------------------------------------------------------------------------- 487 (722)
Q Consensus 488 -------------------------------------------------------------------------------- 487 (722)
T Consensus 551 ~~~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~ 630 (1351)
T KOG1035|consen 551 AELTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNL 630 (1351)
T ss_pred CccccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccc
Confidence
Q ss_pred -----------------------------c--------CeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHH
Q 004954 488 -----------------------------L--------EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQC 530 (722)
Q Consensus 488 -----------------------------~--------~~l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qI 530 (722)
. ..+||-||||+..++..+....... -.....|+++++|
T Consensus 631 S~tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~----~~~d~~wrLFreI 706 (1351)
T KOG1035|consen 631 SNTSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFN----SQRDEAWRLFREI 706 (1351)
T ss_pred ccccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccc----hhhHHHHHHHHHH
Confidence 0 1368999999876655554332210 1367899999999
Q ss_pred HHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCccccc--------------------C-CccccccCCcccCc
Q 004954 531 LEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT--------------------D-NLCLYVQSRSYRAP 589 (722)
Q Consensus 531 l~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~--------------------~-~~~~~~gt~~y~AP 589 (722)
++||+|+|++|||||||||.||++++ ++.|||+|||++.... . ..+..+||--|+||
T Consensus 707 lEGLaYIH~~giIHRDLKP~NIFLd~--~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAP 784 (1351)
T KOG1035|consen 707 LEGLAYIHDQGIIHRDLKPRNIFLDS--RNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAP 784 (1351)
T ss_pred HHHHHHHHhCceeeccCCcceeEEcC--CCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecH
Confidence 99999999999999999999999996 8889999999986511 0 12346889999999
Q ss_pred hhhcCCC---CCchhhHHHHHHHHHHHHhCCCCCCCC-hHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhcccccchhhhh
Q 004954 590 EVIIGLP---YDQKIDLWSLGCILAELWTGEVLFPND-AVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINE 665 (722)
Q Consensus 590 E~l~~~~---~s~ksDIWSLGviL~elltG~~PF~~~-~~~e~l~~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 665 (722)
|++.+.. |+.|+||||||+||+||+. ||... ....++..+. -|.+|.+
T Consensus 785 Ell~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR--~g~iP~~----------------------- 836 (1351)
T KOG1035|consen 785 ELLSDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSMERASILTNLR--KGSIPEP----------------------- 836 (1351)
T ss_pred HHhcccccccccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhcc--cCCCCCC-----------------------
Confidence 9997655 9999999999999999984 57543 2222333322 1111111
Q ss_pred ccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCC
Q 004954 666 ETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQ 719 (722)
Q Consensus 666 ~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~ 719 (722)
...... .-+.-..+|++||+.||.+||||.|+|++.||.
T Consensus 837 ----------~~f~~~-----~~~~e~slI~~Ll~hdP~kRPtA~eLL~s~llp 875 (1351)
T KOG1035|consen 837 ----------ADFFDP-----EHPEEASLIRWLLSHDPSKRPTATELLNSELLP 875 (1351)
T ss_pred ----------cccccc-----cchHHHHHHHHHhcCCCccCCCHHHHhhccCCC
Confidence 000000 012235899999999999999999999999985
No 373
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.9e-34 Score=285.03 Aligned_cols=272 Identities=29% Similarity=0.484 Sum_probs=213.0
Q ss_pred EEeccCCCCceEEEEECCCCcEEEEEEeec---chhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec-----CeE
Q 004954 420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKN---DKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL-----EHL 491 (722)
Q Consensus 420 ~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~---~~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~-----~~l 491 (722)
+-||.|+||.||.+.|..+|+.||+|.+.+ +-....+..+|+++|...+ |.|++..++..+.. ..+
T Consensus 59 RPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFk------HdNVLSaLDILQPph~dfFqEi 132 (449)
T KOG0664|consen 59 RPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFR------HDNVLSLLDILQPANPSFFQEL 132 (449)
T ss_pred CcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhc------cccHHHHHHhcCCCCchHHHHH
Confidence 359999999999999999999999998764 2233467778888888886 45788877776643 357
Q ss_pred EEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCcc
Q 004954 492 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 571 (722)
Q Consensus 492 ~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~ 571 (722)
|+|+|.|..+|...+... ..++...+..+++||++||+|||+.+|.||||||.|.|+++ ++.+||+|||+++
T Consensus 133 YV~TELmQSDLHKIIVSP------Q~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNS--NCvLKICDFGLAR 204 (449)
T KOG0664|consen 133 YVLTELMQSDLHKIIVSP------QALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNS--NCILKICDFGLAR 204 (449)
T ss_pred HHHHHHHHhhhhheeccC------CCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEecc--CceEEeccccccc
Confidence 888998887766655433 33888899999999999999999999999999999999997 9999999999998
Q ss_pred cccCC----ccccccCCcccCchhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhh
Q 004954 572 FQTDN----LCLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQ 646 (722)
Q Consensus 572 ~~~~~----~~~~~gt~~y~APE~l~~~-~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~ 646 (722)
..... .+..+-|-.|+|||++.|. .|+.++||||+|||+.|++-.+..|+..++-+.+..|..++|.+..+.+..
T Consensus 205 vee~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ 284 (449)
T KOG0664|consen 205 TWDQRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKY 284 (449)
T ss_pred ccchhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHH
Confidence 75533 2334568899999999986 499999999999999999999999999999999999999999998887654
Q ss_pred hhhhhhhhcccccchhhhhccccccccCCccchhhhhcc-----cCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCCC
Q 004954 647 GQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQ-----FSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 720 (722)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~-----~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~~ 720 (722)
.-+=.+. ... ...+...+++..+. ....+...++.+||..||.+|.+..+++.|+++..
T Consensus 285 ACEGAk~-------H~L--------R~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~e 348 (449)
T KOG0664|consen 285 ACEGAKN-------HVL--------RAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLEE 348 (449)
T ss_pred HhhhhHH-------Hhh--------ccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccccccc
Confidence 3221110 000 00111111111111 12245779999999999999999999999999854
No 374
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.98 E-value=6.9e-32 Score=317.14 Aligned_cols=251 Identities=20% Similarity=0.323 Sum_probs=202.2
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCC-----cEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEE
Q 004954 413 AGRYYVTEYLGSAAFSKVFQAQDLHTG-----VDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYF 485 (722)
Q Consensus 413 ~~rY~i~~~LG~G~fG~Vy~a~d~~tg-----~~vAvKil~~~~--~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f 485 (722)
..+.+..+.||+|+||.||.|.-.... ..||||.++... .....+++|..+|..+ +|||||+++|++
T Consensus 691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f------~HpNiv~liGv~ 764 (1025)
T KOG1095|consen 691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKF------DHPNIVSLIGVC 764 (1025)
T ss_pred hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcC------CCcceeeEEEee
Confidence 456788889999999999999864332 348999987653 3345566676666666 588999999999
Q ss_pred EecCeEEEEEEccc-cchHHHHhhhhccC-CCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEE
Q 004954 486 YHLEHLFIVCELLR-ANLYEFQKFNQESG-GEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIK 563 (722)
Q Consensus 486 ~~~~~l~iVmEy~~-gsLl~~l~~~~~~~-~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vk 563 (722)
......+|++|||. |+|+.+++...... ....++..++..++.||++|+.||+++++|||||..+|+|++. ...+|
T Consensus 765 l~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~--~r~VK 842 (1025)
T KOG1095|consen 765 LDSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDE--RRVVK 842 (1025)
T ss_pred cCCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecc--cCcEE
Confidence 99999999999997 58999998763321 2345999999999999999999999999999999999999997 68999
Q ss_pred EEecCCcccccCCccc-----cccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcC
Q 004954 564 IIDLGSSCFQTDNLCL-----YVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLG 637 (722)
Q Consensus 564 L~DFGls~~~~~~~~~-----~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~~i~~~lg 637 (722)
|+|||+|+...+.... ..-+..|||||.+....++.|+|||||||++||++| |..||++.+..+++......
T Consensus 843 IaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~g-- 920 (1025)
T KOG1095|consen 843 IADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEG-- 920 (1025)
T ss_pred EcccchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhC--
Confidence 9999999843322221 133567999999999999999999999999999999 99999999888887654421
Q ss_pred CCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHh
Q 004954 638 PIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 714 (722)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~ 714 (722)
.+...| ...+..+.++|..||+.+|++||+...+++
T Consensus 921 --------------------------------gRL~~P---------~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~ 956 (1025)
T KOG1095|consen 921 --------------------------------GRLDPP---------SYCPEKLYQLMLQCWKHDPEDRPSFRTIVE 956 (1025)
T ss_pred --------------------------------CccCCC---------CCCChHHHHHHHHHccCChhhCccHHHHHh
Confidence 111112 234456779999999999999999999986
No 375
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.98 E-value=9.6e-34 Score=283.75 Aligned_cols=264 Identities=24% Similarity=0.338 Sum_probs=206.1
Q ss_pred ceecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 004954 410 TVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 487 (722)
Q Consensus 410 ~~l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~--~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~ 487 (722)
+.-.++.+-+..||.|+||+|++..++.+|+..|||.++... ..+.+++.|.....+-. ..|+||++||....
T Consensus 60 ~F~~~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~-----~cp~IVkfyGa~F~ 134 (361)
T KOG1006|consen 60 TFTSDNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSS-----NCPNIVKFYGALFS 134 (361)
T ss_pred ccccchHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhc-----CCcHHHHHhhhhhc
Confidence 344455666778999999999999999999999999997643 33455666666554443 36899999999999
Q ss_pred cCeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHH-CCCccccCCCCceEEcccCCCeEEEEe
Q 004954 488 LEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS-LGIIHCDLKPENILIKSYQRCEIKIID 566 (722)
Q Consensus 488 ~~~l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs-~gIvHrDLKp~NILl~~~~~~~vkL~D 566 (722)
.+..||.||.|.-++..+.+.-...+ ...+++.-+-.|....+.||.||.. .+||||||||+|||++. .|.|||+|
T Consensus 135 EGdcWiCMELMd~SlDklYk~vy~vq-~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr--~G~vKLCD 211 (361)
T KOG1006|consen 135 EGDCWICMELMDISLDKLYKRVYSVQ-KSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDR--HGDVKLCD 211 (361)
T ss_pred CCceeeeHHHHhhhHHHHHHHHHHHH-hccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEec--CCCEeeec
Confidence 99999999999988776665433222 1238899999999999999999985 58999999999999996 89999999
Q ss_pred cCCcccccCCc--cccccCCcccCchhhcC--CCCCchhhHHHHHHHHHHHHhCCCCCCCC-hHHHHHHHHHhhcCCCcH
Q 004954 567 LGSSCFQTDNL--CLYVQSRSYRAPEVIIG--LPYDQKIDLWSLGCILAELWTGEVLFPND-AVVMILARIIGMLGPIDL 641 (722)
Q Consensus 567 FGls~~~~~~~--~~~~gt~~y~APE~l~~--~~~s~ksDIWSLGviL~elltG~~PF~~~-~~~e~l~~i~~~lg~~~~ 641 (722)
||.+.++.+.. +.-.|...|||||.+.. ..|+-++|+||||++|||+.||+.||..- +..+++.+++. |.+|.
T Consensus 212 FGIcGqLv~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~--gdpp~ 289 (361)
T KOG1006|consen 212 FGICGQLVDSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVI--GDPPI 289 (361)
T ss_pred ccchHhHHHHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHc--CCCCe
Confidence 99987766543 33578899999999963 45899999999999999999999999874 44555555542 22211
Q ss_pred HHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCC
Q 004954 642 EMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQ 719 (722)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~ 719 (722)
..........+..|+.||.-||.+|-+.||.-.+++++||++
T Consensus 290 ------------------------------------l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~~fyr 331 (361)
T KOG1006|consen 290 ------------------------------------LLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKFPFYR 331 (361)
T ss_pred ------------------------------------ecCcccccccCHHHHHHHHHHhhcccccCcchhhhhcCchhh
Confidence 000111112345689999999999999999999999999985
No 376
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.98 E-value=1.1e-31 Score=281.55 Aligned_cols=260 Identities=22% Similarity=0.302 Sum_probs=192.9
Q ss_pred CcEEEEEEeccCCCCceEEEEEC----CCCcEEEEEEeecchh--hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDL----HTGVDVCLKIIKNDKD--FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 487 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~----~tg~~vAvKil~~~~~--~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~ 487 (722)
..|++.+.||+|+||.||++... .+++.+|+|+++.... ....+.+|+++++.+. |+||+++++++..
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~------~~~i~~~~~~~~~ 77 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLD------HENIVKYKGVCEK 77 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCC------CCChheEEeeeec
Confidence 46888999999999999999854 3488999999986544 3567778888887774 6799999999887
Q ss_pred --cCeEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEE
Q 004954 488 --LEHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKI 564 (722)
Q Consensus 488 --~~~l~iVmEy~~-gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL 564 (722)
....++||||+. ++|.+++..... .+++..+..++.||+.||+|||+.|++|+||||+||+++. ++.++|
T Consensus 78 ~~~~~~~lv~e~~~~~~l~~~l~~~~~-----~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~--~~~~~l 150 (284)
T cd05038 78 PGGRSLRLIMEYLPSGSLRDYLQRHRD-----QINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVES--EDLVKI 150 (284)
T ss_pred CCCCceEEEEecCCCCCHHHHHHhCcc-----ccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcC--CCCEEE
Confidence 568999999997 477777754332 3889999999999999999999999999999999999986 788999
Q ss_pred EecCCcccccCCcc------ccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCC
Q 004954 565 IDLGSSCFQTDNLC------LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGP 638 (722)
Q Consensus 565 ~DFGls~~~~~~~~------~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~ 638 (722)
+|||.+........ ...++..|+|||.+.+..++.++||||||+++|+|++|..||....... ....++
T Consensus 151 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~-----~~~~~~ 225 (284)
T cd05038 151 SDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEF-----LRMIGI 225 (284)
T ss_pred cccccccccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchh-----cccccc
Confidence 99999876553211 1233556999999998899999999999999999999999986532211 111111
Q ss_pred CcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHh
Q 004954 639 IDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 714 (722)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~ 714 (722)
...... ...+..... ... ..+. ....+..+.+|+.+||+.+|.+|||+.|+++
T Consensus 226 ~~~~~~--~~~~~~~~~------------~~~--~~~~-------~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05038 226 AQGQMI--VTRLLELLK------------EGE--RLPR-------PPSCPDEVYDLMKLCWEAEPQDRPSFADLIL 278 (284)
T ss_pred cccccc--HHHHHHHHH------------cCC--cCCC-------CccCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 110000 000000000 000 0000 0122467899999999999999999999986
No 377
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=1.7e-32 Score=281.15 Aligned_cols=255 Identities=22% Similarity=0.347 Sum_probs=207.4
Q ss_pred eecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc----hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEE
Q 004954 411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY 486 (722)
Q Consensus 411 ~l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~----~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~ 486 (722)
+-.++|.++.+||+|+|++|.+++.+.+.+.+|+|++++. ....+-...|..+..... .||.+|-+..+|+
T Consensus 247 l~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~as-----n~pflvglhscfq 321 (593)
T KOG0695|consen 247 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS-----NNPFLVGLHSCFQ 321 (593)
T ss_pred cccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhcc-----CCCeEEehhhhhc
Confidence 3347899999999999999999999999999999998763 333444556666766654 4789999999999
Q ss_pred ecCeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEe
Q 004954 487 HLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIID 566 (722)
Q Consensus 487 ~~~~l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~D 566 (722)
+...+++|.||++|+-+-+....++. ++++.++.+...|+-||.|||+.|||+||||.+|||++. .+.+||+|
T Consensus 322 tesrlffvieyv~ggdlmfhmqrqrk-----lpeeharfys~ei~lal~flh~rgiiyrdlkldnvllda--eghikltd 394 (593)
T KOG0695|consen 322 TESRLFFVIEYVNGGDLMFHMQRQRK-----LPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDA--EGHIKLTD 394 (593)
T ss_pred ccceEEEEEEEecCcceeeehhhhhc-----CcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEcc--CCceeecc
Confidence 99999999999998755554444433 999999999999999999999999999999999999996 89999999
Q ss_pred cCCccc---ccCCccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCC-------CChHHHHHHHHHhhc
Q 004954 567 LGSSCF---QTDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFP-------NDAVVMILARIIGML 636 (722)
Q Consensus 567 FGls~~---~~~~~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~-------~~~~~e~l~~i~~~l 636 (722)
+|+.+. .++...+++|||.|.|||++.+..|+..+|+|+|||+|+||+.|+.||. ..+.++++.+++-
T Consensus 395 ygmcke~l~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvil-- 472 (593)
T KOG0695|consen 395 YGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVIL-- 472 (593)
T ss_pred cchhhcCCCCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHh--
Confidence 999864 3445677999999999999999999999999999999999999999993 2344555555430
Q ss_pred CCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCc------CHH
Q 004954 637 GPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRP------TAR 710 (722)
Q Consensus 637 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRp------Ta~ 710 (722)
.-...||...+. -...+|+..|..||.+|. ...
T Consensus 473 --------------------------------ekqiriprslsv---------kas~vlkgflnkdp~erlgc~~~~g~~ 511 (593)
T KOG0695|consen 473 --------------------------------EKQIRIPRSLSV---------KASHVLKGFLNKDPKERLGCRPQTGFS 511 (593)
T ss_pred --------------------------------hhcccccceeeh---------hhHHHHHHhhcCCcHHhcCCCcccchh
Confidence 011223332222 244788999999999996 378
Q ss_pred HHHhCCCCCC
Q 004954 711 EALDHPWLQH 720 (722)
Q Consensus 711 ElL~HPwf~~ 720 (722)
++-.||||+.
T Consensus 512 dik~h~ffr~ 521 (593)
T KOG0695|consen 512 DIKSHAFFRS 521 (593)
T ss_pred hhhcchhhhh
Confidence 9999999974
No 378
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.98 E-value=6.4e-32 Score=306.04 Aligned_cols=256 Identities=25% Similarity=0.381 Sum_probs=212.3
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe-----
Q 004954 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH----- 487 (722)
Q Consensus 413 ~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~----- 487 (722)
.+-|.|.+.||.|.+|.||+++++.+++..|+||...+.+..+.+..|.+||+.+. .|||++.+|++|..
T Consensus 18 ~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~-----~hpnv~~fyg~~~k~~~~~ 92 (953)
T KOG0587|consen 18 ADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYS-----HHPNVATFYGAFIKKDPGN 92 (953)
T ss_pred CCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhcc-----CCCCcceEEEEEEEecCCC
Confidence 46799999999999999999999999999999999988777778888888998886 48999999999984
Q ss_pred cCeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEe
Q 004954 488 LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIID 566 (722)
Q Consensus 488 ~~~l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~D 566 (722)
++.+|+|||||+| +..++++... ...+.+..+..|++.++.||.+||.+.++|||||-.|||++. ++.|||+|
T Consensus 93 ~DqLWLVMEfC~gGSVTDLVKn~~----g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~--e~~VKLvD 166 (953)
T KOG0587|consen 93 GDQLWLVMEFCGGGSVTDLVKNTK----GNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTE--NAEVKLVD 166 (953)
T ss_pred CCeEEEEeeccCCccHHHHHhhhc----ccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEec--cCcEEEee
Confidence 3689999999984 6777776544 223889999999999999999999999999999999999996 89999999
Q ss_pred cCCcccccCC---ccccccCCcccCchhhcCC-----CCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCC
Q 004954 567 LGSSCFQTDN---LCLYVQSRSYRAPEVIIGL-----PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGP 638 (722)
Q Consensus 567 FGls~~~~~~---~~~~~gt~~y~APE~l~~~-----~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~ 638 (722)
||.+.+.... ..+.+|||.|||||++... .|+..+|+||||++..||..|.+|+-+..+.-.+..|. .+
T Consensus 167 FGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~Ip---RN 243 (953)
T KOG0587|consen 167 FGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIP---RN 243 (953)
T ss_pred eeeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccCC---CC
Confidence 9998876543 4567999999999998643 37789999999999999999999997765544333321 11
Q ss_pred CcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCC
Q 004954 639 IDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 718 (722)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf 718 (722)
+|+. ..++......|.+||..||..|-.+||+..++|+|||+
T Consensus 244 PPPk--------------------------------------Lkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi 285 (953)
T KOG0587|consen 244 PPPK--------------------------------------LKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPFI 285 (953)
T ss_pred CCcc--------------------------------------ccchhhHHHHHHHHHHHHHhhccccCcchhhhccCCcc
Confidence 1111 01122234568899999999999999999999999999
Q ss_pred CC
Q 004954 719 QH 720 (722)
Q Consensus 719 ~~ 720 (722)
+.
T Consensus 286 ~e 287 (953)
T KOG0587|consen 286 TE 287 (953)
T ss_pred cc
Confidence 74
No 379
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=2.4e-33 Score=300.49 Aligned_cols=252 Identities=25% Similarity=0.391 Sum_probs=213.0
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeec----chhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec
Q 004954 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKN----DKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 488 (722)
Q Consensus 413 ~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~----~~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~ 488 (722)
-.+.+++..||-||||.|-++..+.....+|+|++++ +....+.+..|.+||..++. |.||++|..|.+.
T Consensus 419 l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s------~fIvrLYrTfrd~ 492 (732)
T KOG0614|consen 419 LSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRS------DFIVRLYRTFRDS 492 (732)
T ss_pred hhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCc------hHHHHHHHHhccc
Confidence 3567788899999999999998766655689999875 34556778889999988873 6999999999999
Q ss_pred CeEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEec
Q 004954 489 EHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDL 567 (722)
Q Consensus 489 ~~l~iVmEy~~-gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DF 567 (722)
..+|++||-|- |.+...++..+ .|....++.++.++++|+.|||.+|||+|||||+|.|++. +|-+||.||
T Consensus 493 kyvYmLmEaClGGElWTiLrdRg------~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~--~Gy~KLVDF 564 (732)
T KOG0614|consen 493 KYVYMLMEACLGGELWTILRDRG------SFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDN--RGYLKLVDF 564 (732)
T ss_pred hhhhhhHHhhcCchhhhhhhhcC------CcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeecc--CCceEEeeh
Confidence 99999999985 56666666443 2888999999999999999999999999999999999996 899999999
Q ss_pred CCcccccCC--ccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHh
Q 004954 568 GSSCFQTDN--LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLM 645 (722)
Q Consensus 568 Gls~~~~~~--~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~ 645 (722)
|+|+..... .-+++|||.|.|||+++++..+.++|.||||+++||||+|.+||.+.++...+..|.+.+..+.
T Consensus 565 GFAKki~~g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i~----- 639 (732)
T KOG0614|consen 565 GFAKKIGSGRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKIE----- 639 (732)
T ss_pred hhHHHhccCCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhhh-----
Confidence 999887654 3458999999999999999999999999999999999999999999999988888875433211
Q ss_pred hhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcC-----HHHHHhCCCCCC
Q 004954 646 QGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPT-----AREALDHPWLQH 720 (722)
Q Consensus 646 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpT-----a~ElL~HPwf~~ 720 (722)
+|. .......+||+++...+|.+|.- +.++-+|-||..
T Consensus 640 ----------------------------~Pr---------~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~g 682 (732)
T KOG0614|consen 640 ----------------------------FPR---------RITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEG 682 (732)
T ss_pred ----------------------------ccc---------ccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhc
Confidence 111 11233669999999999999986 899999999963
No 380
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.98 E-value=5.9e-31 Score=275.45 Aligned_cols=245 Identities=17% Similarity=0.190 Sum_probs=178.9
Q ss_pred EeccCCCCceEEEEECCC--CcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEEE
Q 004954 421 YLGSAAFSKVFQAQDLHT--GVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCE 496 (722)
Q Consensus 421 ~LG~G~fG~Vy~a~d~~t--g~~vAvKil~~~~--~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~iVmE 496 (722)
.||+|+||+||+++.... ...+++|.+.... .....+.+|..+++.+ .||||+++++.+......++|||
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l------~h~~iv~~~~~~~~~~~~~lv~e 75 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRIL------QHPNILQCLGQCVEAIPYLLVFE 75 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhcc------CCcchhheEEEecCCCccEEEEe
Confidence 599999999999975332 3356677665432 2334566677666655 47899999999999999999999
Q ss_pred cccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCcccccC
Q 004954 497 LLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTD 575 (722)
Q Consensus 497 y~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~~ 575 (722)
|+.+ +|.+++...... ...+++..++.++.||+.||+|||+.+++||||||+|||++. ++.++|+|||++.....
T Consensus 76 ~~~~~~L~~~l~~~~~~--~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~--~~~~~l~Dfg~~~~~~~ 151 (268)
T cd05086 76 YCELGDLKSYLSQEQWH--RRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTS--DLTVKVGDYGIGPSRYK 151 (268)
T ss_pred cCCCCcHHHHHHhhhcc--cccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcC--CccEEecccccccccCc
Confidence 9984 677776543221 223677788899999999999999999999999999999985 78899999998754221
Q ss_pred -----CccccccCCcccCchhhcC-------CCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHH
Q 004954 576 -----NLCLYVQSRSYRAPEVIIG-------LPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLE 642 (722)
Q Consensus 576 -----~~~~~~gt~~y~APE~l~~-------~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~~i~~~lg~~~~~ 642 (722)
......+++.|+|||++.. ..++.++|||||||++|+|++ |..||......+.+..+......
T Consensus 152 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~---- 227 (268)
T cd05086 152 EDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQV---- 227 (268)
T ss_pred chhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhccc----
Confidence 1123467889999999753 245789999999999999997 67899776665555443211000
Q ss_pred HHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHh
Q 004954 643 MLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 714 (722)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~ 714 (722)
......+ ....++.+.++|..|| .+|.+||++.++++
T Consensus 228 -------------------------~~~~~~~---------~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~ 264 (268)
T cd05086 228 -------------------------KLFKPQL---------ELPYSERWYEVLQFCW-LSPEKRATAEEVHR 264 (268)
T ss_pred -------------------------ccCCCcc---------CCCCcHHHHHHHHHHh-hCcccCCCHHHHHH
Confidence 0000000 1113456889999999 68999999999975
No 381
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.1e-31 Score=292.22 Aligned_cols=246 Identities=21% Similarity=0.299 Sum_probs=210.8
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEE
Q 004954 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF 492 (722)
Q Consensus 413 ~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~ 492 (722)
..+..+.++||-|-||.||.|.|+.-.-.||||.++.+......++.|..+|+.++ |||+|+++++|.....+|
T Consensus 266 RtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeik------HpNLVqLLGVCT~EpPFY 339 (1157)
T KOG4278|consen 266 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK------HPNLVQLLGVCTHEPPFY 339 (1157)
T ss_pred chheeeeeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhc------CccHHHHhhhhccCCCeE
Confidence 34566778999999999999999999999999999999888899999999999997 679999999999999999
Q ss_pred EEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCcc
Q 004954 493 IVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 571 (722)
Q Consensus 493 iVmEy~~-gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~ 571 (722)
||+|||. |+|+++++.+.... ++.-.++.|+.||..||.||..+++|||||..+|+||.. +..|||+|||+++
T Consensus 340 IiTEfM~yGNLLdYLRecnr~e----v~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgE--nhiVKvADFGLsR 413 (1157)
T KOG4278|consen 340 IITEFMCYGNLLDYLRECNRSE----VPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE--NHIVKVADFGLSR 413 (1157)
T ss_pred EEEecccCccHHHHHHHhchhh----cchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccc--cceEEeeccchhh
Confidence 9999997 89999999876654 777788899999999999999999999999999999996 8889999999999
Q ss_pred cccCCccc-ccc---CCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHHHHhh
Q 004954 572 FQTDNLCL-YVQ---SRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLMQ 646 (722)
Q Consensus 572 ~~~~~~~~-~~g---t~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~ 646 (722)
+......+ ..| +..|.|||.+....++.++|||+|||+||||.| |-.||++-+...++..+.+.
T Consensus 414 lMtgDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkg----------- 482 (1157)
T KOG4278|consen 414 LMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKG----------- 482 (1157)
T ss_pred hhcCCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhcc-----------
Confidence 87654332 233 567999999999999999999999999999998 99999998776665444311
Q ss_pred hhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHH
Q 004954 647 GQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREAL 713 (722)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL 713 (722)
.+..- ++..++...+||+.||+|+|+.||+..|+-
T Consensus 483 -----------------------yRM~~---------PeGCPpkVYeLMraCW~WsPsDRPsFaeiH 517 (1157)
T KOG4278|consen 483 -----------------------YRMDG---------PEGCPPKVYELMRACWNWSPSDRPSFAEIH 517 (1157)
T ss_pred -----------------------ccccC---------CCCCCHHHHHHHHHHhcCCcccCccHHHHH
Confidence 11111 233456688999999999999999988874
No 382
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.97 E-value=2.4e-32 Score=304.64 Aligned_cols=206 Identities=27% Similarity=0.351 Sum_probs=174.0
Q ss_pred eCceecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEE
Q 004954 408 LNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYF 485 (722)
Q Consensus 408 ~~~~l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~--~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f 485 (722)
+...-..-|...+.||+||||.||+++++.+|+.||||.++.. ....+...+|+++|++|+ |+|||+++++-
T Consensus 7 l~~~~~y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLn------h~NIVk~f~ie 80 (732)
T KOG4250|consen 7 LTSGENYLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLN------HPNIVKLFDIE 80 (732)
T ss_pred cccCCCcceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcC------chhhhhhcccC
Confidence 3333446688889999999999999999999999999999863 345678899999999997 57999999986
Q ss_pred Eec------CeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccC
Q 004954 486 YHL------EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQ 558 (722)
Q Consensus 486 ~~~------~~l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~ 558 (722)
... ....+|||||.| +|...+.. +.....+++.+++.++..++.||.|||++||+||||||.||++-...
T Consensus 81 e~~~~~~~~~~~vlvmEyC~gGsL~~~L~~---PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Ge 157 (732)
T KOG4250|consen 81 ETKFLGLVTRLPVLVMEYCSGGSLRKVLNS---PENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGE 157 (732)
T ss_pred CccccCcccccceEEEeecCCCcHHHHhcC---cccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecC
Confidence 544 467899999985 56655543 23344599999999999999999999999999999999999986544
Q ss_pred CC--eEEEEecCCcccccCC--ccccccCCcccCchhhc-CCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 004954 559 RC--EIKIIDLGSSCFQTDN--LCLYVQSRSYRAPEVII-GLPYDQKIDLWSLGCILAELWTGEVLFPN 622 (722)
Q Consensus 559 ~~--~vkL~DFGls~~~~~~--~~~~~gt~~y~APE~l~-~~~~s~ksDIWSLGviL~elltG~~PF~~ 622 (722)
++ ..||+|||.|+-..+. ....+||+.|.+||++. .+.|+..+|.|||||++|++.||.+||-.
T Consensus 158 dgq~IyKLtDfG~Arel~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p 226 (732)
T KOG4250|consen 158 DGQSIYKLTDFGAARELDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIP 226 (732)
T ss_pred CCceEEeeecccccccCCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCc
Confidence 33 5799999999877654 55689999999999999 48899999999999999999999999954
No 383
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.97 E-value=5.5e-32 Score=286.94 Aligned_cols=293 Identities=26% Similarity=0.402 Sum_probs=214.8
Q ss_pred eecCcEEEEEEeccCCCCceEEEEECC---CCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 004954 411 VIAGRYYVTEYLGSAAFSKVFQAQDLH---TGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 487 (722)
Q Consensus 411 ~l~~rY~i~~~LG~G~fG~Vy~a~d~~---tg~~vAvKil~~~~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~ 487 (722)
.+.+.|+++++||.|.|++||++.+.. ..+.||+|.+..... ..++.+|+++|..+... .||+++.+++..
T Consensus 33 ~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~-p~ri~~El~~L~~~gG~-----~ni~~~~~~~rn 106 (418)
T KOG1167|consen 33 FISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS-PSRILNELEMLYRLGGS-----DNIIKLNGCFRN 106 (418)
T ss_pred hhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccC-chHHHHHHHHHHHhccc-----hhhhcchhhhcc
Confidence 345679999999999999999999877 788999998865432 35789999999999754 599999999999
Q ss_pred cCeEEEEEEccccc-hHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEe
Q 004954 488 LEHLFIVCELLRAN-LYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIID 566 (722)
Q Consensus 488 ~~~l~iVmEy~~gs-Ll~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~D 566 (722)
.+...+||||++.. ..++... ++...++.+++.++.||+++|.+|||||||||.|+|.+. ..+.-.|+|
T Consensus 107 nd~v~ivlp~~~H~~f~~l~~~---------l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~-~t~rg~LvD 176 (418)
T KOG1167|consen 107 NDQVAIVLPYFEHDRFRDLYRS---------LSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNR-RTQRGVLVD 176 (418)
T ss_pred CCeeEEEecccCccCHHHHHhc---------CCHHHHHHHHHHHHHHhhhhhccCccccCCCcccccccc-ccCCceEEe
Confidence 99999999999864 3333331 778899999999999999999999999999999999986 567788999
Q ss_pred cCCcccc-----------------cC----------------C--------------ccccccCCcccCchhhcCCC-CC
Q 004954 567 LGSSCFQ-----------------TD----------------N--------------LCLYVQSRSYRAPEVIIGLP-YD 598 (722)
Q Consensus 567 FGls~~~-----------------~~----------------~--------------~~~~~gt~~y~APE~l~~~~-~s 598 (722)
||++... .. + .....||++|+|||++...+ .+
T Consensus 177 FgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~Qt 256 (418)
T KOG1167|consen 177 FGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQT 256 (418)
T ss_pred chhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcC
Confidence 9987510 00 0 00147899999999987654 77
Q ss_pred chhhHHHHHHHHHHHHhCCCCC-CCChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhcccccchhhhhcccccccc----
Q 004954 599 QKIDLWSLGCILAELWTGEVLF-PNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYI---- 673 (722)
Q Consensus 599 ~ksDIWSLGviL~elltG~~PF-~~~~~~e~l~~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 673 (722)
.++||||.|||+.-+++++.|| ...+..+.+.+|+-.+|.....-.+......-.+.+.. ..........++..
T Consensus 257 taiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn-~~~~~e~~~~f~s~~~~~ 335 (418)
T KOG1167|consen 257 TAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSN-IPTIPELRVNFETLHIES 335 (418)
T ss_pred CccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeecccc-ccccHHHHhchhccChhh
Confidence 8999999999999999999998 44555667777777777655443332211100111000 00000000000000
Q ss_pred -CCcc---chhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCCC
Q 004954 674 -IPEE---SSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 720 (722)
Q Consensus 674 -ip~~---~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~~ 720 (722)
.+.. ...+......+..+.+||.+||..||.+|.||+++|+||||..
T Consensus 336 ~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~ 386 (418)
T KOG1167|consen 336 IYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDE 386 (418)
T ss_pred cccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcc
Confidence 0000 1112223344567899999999999999999999999999974
No 384
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=2.2e-31 Score=290.93 Aligned_cols=253 Identities=23% Similarity=0.357 Sum_probs=196.1
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec
Q 004954 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 488 (722)
Q Consensus 413 ~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~----~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~ 488 (722)
..-|..++.||-|+||+|.++....|...||+|.+++.. ........|..||.+.. .+-||+||..|+++
T Consensus 628 KSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEAD------n~WVVrLyySFQDk 701 (1034)
T KOG0608|consen 628 KSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEAD------NEWVVRLYYSFQDK 701 (1034)
T ss_pred ccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcC------CcceEEEEEEeccC
Confidence 345889999999999999999988999999999987643 22334455666776654 45899999999999
Q ss_pred CeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEec
Q 004954 489 EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDL 567 (722)
Q Consensus 489 ~~l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DF 567 (722)
+.+|+||+|+.| ++-.++..... |.+..++.++..+..|+++.|+.|+|||||||+||||+. +|.|||+||
T Consensus 702 dnLYFVMdYIPGGDmMSLLIrmgI------FeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDr--dGHIKLTDF 773 (1034)
T KOG0608|consen 702 DNLYFVMDYIPGGDMMSLLIRMGI------FEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDR--DGHIKLTDF 773 (1034)
T ss_pred CceEEEEeccCCccHHHHHHHhcc------CHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEcc--CCceeeeec
Confidence 999999999986 55555554332 889999999999999999999999999999999999996 999999999
Q ss_pred CCccc---------ccCC------------------------------------ccccccCCcccCchhhcCCCCCchhh
Q 004954 568 GSSCF---------QTDN------------------------------------LCLYVQSRSYRAPEVIIGLPYDQKID 602 (722)
Q Consensus 568 Gls~~---------~~~~------------------------------------~~~~~gt~~y~APE~l~~~~~s~ksD 602 (722)
|++.- +... ....+||+.|+|||++....|+...|
T Consensus 774 GLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cd 853 (1034)
T KOG0608|consen 774 GLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCD 853 (1034)
T ss_pred cccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccch
Confidence 98621 0000 01148899999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhh
Q 004954 603 LWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEH 682 (722)
Q Consensus 603 IWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~ 682 (722)
+||.|||||||+.|++||..+.+.+...+++ +|+. ...+|....
T Consensus 854 wws~gvil~em~~g~~pf~~~tp~~tq~kv~------------nw~~---------------------~l~~~~~~~--- 897 (1034)
T KOG0608|consen 854 WWSVGVILYEMLVGQPPFLADTPGETQYKVI------------NWRN---------------------FLHIPYQGN--- 897 (1034)
T ss_pred hhHhhHHHHHHhhCCCCccCCCCCcceeeee------------ehhh---------------------ccccccccc---
Confidence 9999999999999999998765544333322 1111 111222222
Q ss_pred hcccCcHHHHHHHHHhcccCCCCCc---CHHHHHhCCCCCC
Q 004954 683 HLQFSDAFFIDFVRTLLEINPQRRP---TAREALDHPWLQH 720 (722)
Q Consensus 683 ~~~~~~~~l~dLL~~mL~~dP~kRp---Ta~ElL~HPwf~~ 720 (722)
.+.+..+||.++ ...++.|. -+++|-.||||+.
T Consensus 898 ----ls~e~~~li~kL-c~sad~RLGkng~d~vKaHpfFkg 933 (1034)
T KOG0608|consen 898 ----LSKEALDLIQKL-CCSADSRLGKNGADQVKAHPFFKG 933 (1034)
T ss_pred ----cCHHHHHHHHHH-hcChhhhhcccchhhhhcCccccc
Confidence 245677888875 45777886 4788999999975
No 385
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.97 E-value=3.1e-30 Score=261.53 Aligned_cols=238 Identities=39% Similarity=0.618 Sum_probs=192.2
Q ss_pred CCCceEEEEECCCCcEEEEEEeecchhh--hHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEEEcccc-ch
Q 004954 426 AFSKVFQAQDLHTGVDVCLKIIKNDKDF--FDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRA-NL 502 (722)
Q Consensus 426 ~fG~Vy~a~d~~tg~~vAvKil~~~~~~--~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~iVmEy~~g-sL 502 (722)
+||.||++++..+|+.+|+|++...... .+.+.+|++.++.+ .|+||+++++.+......++||||+.+ +|
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l------~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L 74 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKL------KHPNIVRLYDVFEDEDKLYLVMEYCDGGDL 74 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhC------CCCcHHHHHhheeeCCEEEEEEeCCCCCCH
Confidence 5899999999889999999998764332 46777888888877 367999999999999999999999987 77
Q ss_pred HHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCcccccCC--cccc
Q 004954 503 YEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDN--LCLY 580 (722)
Q Consensus 503 l~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~~~--~~~~ 580 (722)
.+++..... ++...++.++.+++.+|.+||+.+++|+||+|+||+++. ++.++|+|||.+...... ....
T Consensus 75 ~~~~~~~~~------~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~--~~~~~l~d~~~~~~~~~~~~~~~~ 146 (244)
T smart00220 75 FDLLKKRGR------LSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDE--DGHVKLADFGLARQLDPGGLLTTF 146 (244)
T ss_pred HHHHHhccC------CCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECC--CCcEEEccccceeeeccccccccc
Confidence 776654321 788999999999999999999999999999999999996 688999999998776553 3445
Q ss_pred ccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC-ChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhccccc
Q 004954 581 VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPN-DAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYD 659 (722)
Q Consensus 581 ~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~-~~~~e~l~~i~~~lg~~~~~~~~~~~~~~~~~~~~~~ 659 (722)
.++..|+|||.+.+..++.++||||||+++++|++|..||.. .........+........
T Consensus 147 ~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~------------------- 207 (244)
T smart00220 147 VGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFP------------------- 207 (244)
T ss_pred cCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCc-------------------
Confidence 678899999999988889999999999999999999999977 333333322211100000
Q ss_pred chhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCC
Q 004954 660 LYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 718 (722)
Q Consensus 660 ~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf 718 (722)
+.. ...+..+.+++.+||..+|++||++.++++||||
T Consensus 208 ---------------~~~-------~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~~~~~ 244 (244)
T smart00220 208 ---------------PPE-------WKISPEAKDLIRKLLVKDPEKRLTAEEALQHPFF 244 (244)
T ss_pred ---------------ccc-------ccCCHHHHHHHHHHccCCchhccCHHHHhhCCCC
Confidence 000 0023568899999999999999999999999997
No 386
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=99.97 E-value=2e-31 Score=297.89 Aligned_cols=247 Identities=21% Similarity=0.280 Sum_probs=207.1
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCc---EEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 004954 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGV---DVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 487 (722)
Q Consensus 413 ~~rY~i~~~LG~G~fG~Vy~a~d~~tg~---~vAvKil~~~~--~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~ 487 (722)
....+|.++||.|-||.|++|+.+..|+ .||||.++... .....++.|..||- +.+||||++|.++...
T Consensus 628 ~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMG------QFdHPNIIrLEGVVTk 701 (996)
T KOG0196|consen 628 PSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMG------QFDHPNIIRLEGVVTK 701 (996)
T ss_pred hhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcc------cCCCCcEEEEEEEEec
Confidence 4568899999999999999999877764 59999998743 34455666666654 4578999999999999
Q ss_pred cCeEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEe
Q 004954 488 LEHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIID 566 (722)
Q Consensus 488 ~~~l~iVmEy~~-gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~D 566 (722)
...+.||+|||+ |+|..+++.+.. .|+..++.-|++.|+.||+||-+.++|||||..+||||++ +..+|++|
T Consensus 702 s~PvMIiTEyMENGsLDsFLR~~DG-----qftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNs--nLvCKVsD 774 (996)
T KOG0196|consen 702 SKPVMIITEYMENGSLDSFLRQNDG-----QFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNS--NLVCKVSD 774 (996)
T ss_pred CceeEEEhhhhhCCcHHHHHhhcCC-----ceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeecc--ceEEEecc
Confidence 999999999997 677777775542 2899999999999999999999999999999999999997 88999999
Q ss_pred cCCcccccCCccc---ccc---CCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCC
Q 004954 567 LGSSCFQTDNLCL---YVQ---SRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPI 639 (722)
Q Consensus 567 FGls~~~~~~~~~---~~g---t~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~~i~~~lg~~ 639 (722)
||+++...+.... ..| +.+|.|||.+...+++.++||||+|++|||.|+ |+.||.+.+..+.+..|....+-+
T Consensus 775 FGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~gyRLP 854 (996)
T KOG0196|consen 775 FGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQGYRLP 854 (996)
T ss_pred ccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHHHHHHhccCCC
Confidence 9999987654421 111 467999999999999999999999999999887 999999999999999887544432
Q ss_pred cHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhC
Q 004954 640 DLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 715 (722)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~H 715 (722)
|+ .-.+..|.+|+..||++|-.+||+..+|+.+
T Consensus 855 pP-------------------------------------------mDCP~aL~qLMldCWqkdR~~RP~F~qiV~~ 887 (996)
T KOG0196|consen 855 PP-------------------------------------------MDCPAALYQLMLDCWQKDRNRRPKFAQIVST 887 (996)
T ss_pred CC-------------------------------------------CCCcHHHHHHHHHHHHHHhhcCCCHHHHHHH
Confidence 21 1235678999999999999999999999864
No 387
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=99.97 E-value=6.9e-31 Score=286.85 Aligned_cols=241 Identities=23% Similarity=0.337 Sum_probs=194.6
Q ss_pred EEEEEEeccCCCCceEEEEECC----CCcEEEEEEeecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 004954 416 YYVTEYLGSAAFSKVFQAQDLH----TGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (722)
Q Consensus 416 Y~i~~~LG~G~fG~Vy~a~d~~----tg~~vAvKil~~~--~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (722)
....++||.|-||.||+|.... ..--||||+.+.+ .+..+.++.|.-+++.+ +||||++++|++.. .
T Consensus 391 Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnf------dHphIikLIGv~~e-~ 463 (974)
T KOG4257|consen 391 ITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNF------DHPHIIKLIGVCVE-Q 463 (974)
T ss_pred ccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhC------CCcchhheeeeeec-c
Confidence 3445679999999999997532 2345899999874 34467788888888777 58899999999864 6
Q ss_pred eEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecC
Q 004954 490 HLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (722)
Q Consensus 490 ~l~iVmEy~~-gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFG 568 (722)
..+||||.+. |.|..++..+... ++...+..++.||+.||+|||+.++|||||..+||||.+ .--|||+|||
T Consensus 464 P~WivmEL~~~GELr~yLq~nk~s-----L~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsS--p~CVKLaDFG 536 (974)
T KOG4257|consen 464 PMWIVMELAPLGELREYLQQNKDS-----LPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSS--PQCVKLADFG 536 (974)
T ss_pred ceeEEEecccchhHHHHHHhcccc-----chHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecC--cceeeecccc
Confidence 7899999998 7788888866554 889999999999999999999999999999999999997 5569999999
Q ss_pred CcccccCCcccc----ccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHHH
Q 004954 569 SSCFQTDNLCLY----VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEM 643 (722)
Q Consensus 569 ls~~~~~~~~~~----~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~~i~~~lg~~~~~~ 643 (722)
+++...+..... .-+..|||||.+....++.++|||.|||++|||+. |..||.+....+++..|...
T Consensus 537 LSR~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnG-------- 608 (974)
T KOG4257|consen 537 LSRYLEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENG-------- 608 (974)
T ss_pred hhhhccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecCC--------
Confidence 999887764432 22556999999999999999999999999999987 99999887665555443211
Q ss_pred HhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHH
Q 004954 644 LMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREAL 713 (722)
Q Consensus 644 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL 713 (722)
-+. ..+.+.++.+..|+.+||.++|.+||+..++.
T Consensus 609 --------------------------eRl---------P~P~nCPp~LYslmskcWayeP~kRPrftei~ 643 (974)
T KOG4257|consen 609 --------------------------ERL---------PCPPNCPPALYSLMSKCWAYEPSKRPRFTEIK 643 (974)
T ss_pred --------------------------CCC---------CCCCCCChHHHHHHHHHhccCcccCCcHHHHH
Confidence 011 12235667889999999999999999987764
No 388
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=3.5e-31 Score=292.35 Aligned_cols=247 Identities=24% Similarity=0.355 Sum_probs=204.7
Q ss_pred CcEEEEEEeccCCCCceEEEEECCC-C--cEEEEEEeecchh--hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHT-G--VDVCLKIIKNDKD--FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 488 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~t-g--~~vAvKil~~~~~--~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~ 488 (722)
++.++.++||+|.||.|++|.|... | ..||||+++.+.. ..+.+++|..+|.+|+ |+|++++|++..+
T Consensus 110 e~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~------H~hliRLyGvVl~- 182 (1039)
T KOG0199|consen 110 EQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQ------HPHLIRLYGVVLD- 182 (1039)
T ss_pred HHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhcc------CcceeEEeeeecc-
Confidence 4677788999999999999998643 3 4589999987543 4678889999888886 7899999999887
Q ss_pred CeEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEec
Q 004954 489 EHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDL 567 (722)
Q Consensus 489 ~~l~iVmEy~~-gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DF 567 (722)
..+.+|||++. |+|++-++... ...|....+..++.||+.||.||.++++|||||..+|+|+-+ ...|||+||
T Consensus 183 qp~mMV~ELaplGSLldrLrka~----~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllas--prtVKI~DF 256 (1039)
T KOG0199|consen 183 QPAMMVFELAPLGSLLDRLRKAK----KAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLAS--PRTVKICDF 256 (1039)
T ss_pred chhhHHhhhcccchHHHHHhhcc----ccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecc--cceeeeecc
Confidence 78889999998 68888877622 223888999999999999999999999999999999999986 778999999
Q ss_pred CCcccccCCcccccc------CCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCc
Q 004954 568 GSSCFQTDNLCLYVQ------SRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPID 640 (722)
Q Consensus 568 Gls~~~~~~~~~~~g------t~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~~i~~~lg~~~ 640 (722)
|+.+-+......++- ...|+|||.+....++.++|+|++||++|||+| |+-||.+.....++.+|-+.
T Consensus 257 GLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~~----- 331 (1039)
T KOG0199|consen 257 GLMRALGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDAG----- 331 (1039)
T ss_pred cceeccCCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhcccc-----
Confidence 999877766544332 345999999999999999999999999999999 89999999988888776310
Q ss_pred HHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCC
Q 004954 641 LEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHP 716 (722)
Q Consensus 641 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HP 716 (722)
+.+ .+++..++.+.+++..||..+|.+|||...|.+.-
T Consensus 332 -------------------------------erL-------pRPk~csedIY~imk~cWah~paDRptFsair~~~ 369 (1039)
T KOG0199|consen 332 -------------------------------ERL-------PRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDL 369 (1039)
T ss_pred -------------------------------ccC-------CCCCCChHHHHHHHHHhccCCccccccHHHHHHhH
Confidence 011 12334567899999999999999999999886543
No 389
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.97 E-value=8.2e-30 Score=288.61 Aligned_cols=276 Identities=19% Similarity=0.288 Sum_probs=184.1
Q ss_pred cCcEEEEEEeccCCCCceEEEEEC----------------CCCcEEEEEEeecchhh---------------hHhHHHHH
Q 004954 413 AGRYYVTEYLGSAAFSKVFQAQDL----------------HTGVDVCLKIIKNDKDF---------------FDQSLDEI 461 (722)
Q Consensus 413 ~~rY~i~~~LG~G~fG~Vy~a~d~----------------~tg~~vAvKil~~~~~~---------------~~~~~~E~ 461 (722)
.++|.+.++||+|+||+||+|.+. ..++.||||.++..... .+....|+
T Consensus 144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~ 223 (507)
T PLN03224 144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA 223 (507)
T ss_pred ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence 468999999999999999999752 34567999998653211 11223466
Q ss_pred HHHHHhcccCCCCCCceeEEEEEEEe--------cCeEEEEEEcccc-chHHHHhhhhcc------------------CC
Q 004954 462 KLLKLVNKNDPADEHHILRLYDYFYH--------LEHLFIVCELLRA-NLYEFQKFNQES------------------GG 514 (722)
Q Consensus 462 ~il~~L~~~~~~~hpnIv~l~~~f~~--------~~~l~iVmEy~~g-sLl~~l~~~~~~------------------~~ 514 (722)
.++.++++.+ ..+.++++++++|.. .+..++||||+.+ +|.+++...... ..
T Consensus 224 ~~l~~l~~~~-l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 224 YMCAKIKRNP-IAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHhhccc-chhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 6666666542 344566788887753 3568999999974 676666532110 01
Q ss_pred CcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCcccccCCc--c--ccccCCcccCch
Q 004954 515 EAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNL--C--LYVQSRSYRAPE 590 (722)
Q Consensus 515 ~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~~~~--~--~~~gt~~y~APE 590 (722)
...+.+..++.++.|++.+|.|||+.+|+||||||+|||++. ++.+||+|||++....... . ....++.|+|||
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~--~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE 380 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTV--DGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPE 380 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECC--CCcEEEEeCcCccccccCCccCccccCCCcceeChh
Confidence 122567788899999999999999999999999999999986 6789999999986543221 1 123478999999
Q ss_pred hhcCCC--------------------CC--chhhHHHHHHHHHHHHhCCC-CCCCChHHHHHHHHHhhcCCCcHHHHhhh
Q 004954 591 VIIGLP--------------------YD--QKIDLWSLGCILAELWTGEV-LFPNDAVVMILARIIGMLGPIDLEMLMQG 647 (722)
Q Consensus 591 ~l~~~~--------------------~s--~ksDIWSLGviL~elltG~~-PF~~~~~~e~l~~i~~~lg~~~~~~~~~~ 647 (722)
.+.... ++ .+.||||+||++|+|++|.. ||.+........+. ...
T Consensus 381 ~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~-----------~~~- 448 (507)
T PLN03224 381 ELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQ-----------YDN- 448 (507)
T ss_pred hhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhh-----------ccc-
Confidence 986432 11 24799999999999999875 77542211100000 000
Q ss_pred hhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCC---CCCcCHHHHHhCCCCCCCC
Q 004954 648 QEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINP---QRRPTAREALDHPWLQHPY 722 (722)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP---~kRpTa~ElL~HPwf~~~~ 722 (722)
....| .. .....+.++. ....++...+||.+||..+| .+|+|++|+|+||||...|
T Consensus 449 -~~~~~----------r~-~~~~~~~~~~-------~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~~~~ 507 (507)
T PLN03224 449 -DLNRW----------RM-YKGQKYDFSL-------LDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFLPEF 507 (507)
T ss_pred -hHHHH----------Hh-hcccCCCccc-------ccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcCCCC
Confidence 00000 00 0000111110 11234678899999999766 7899999999999998654
No 390
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.97 E-value=2.3e-31 Score=300.38 Aligned_cols=245 Identities=30% Similarity=0.417 Sum_probs=189.8
Q ss_pred EEeccCCCCc-eEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEEEcc
Q 004954 420 EYLGSAAFSK-VFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELL 498 (722)
Q Consensus 420 ~~LG~G~fG~-Vy~a~d~~tg~~vAvKil~~~~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~iVmEy~ 498 (722)
+++|.|+.|+ ||+|. ..|+.||||.+-.+ ..+...+|+..|+.-. .|||||++|+.-++...+||+.|.|
T Consensus 515 eilG~Gs~Gt~Vf~G~--ye~R~VAVKrll~e--~~~~A~rEi~lL~eSD-----~H~NviRyyc~E~d~qF~YIalELC 585 (903)
T KOG1027|consen 515 EILGYGSNGTVVFRGV--YEGREVAVKRLLEE--FFDFAQREIQLLQESD-----EHPNVIRYYCSEQDRQFLYIALELC 585 (903)
T ss_pred HHcccCCCCcEEEEEe--eCCceehHHHHhhH--hHHHHHHHHHHHHhcc-----CCCceEEEEeeccCCceEEEEehHh
Confidence 3589999876 67887 57899999987543 3356778999888775 5899999999999999999999999
Q ss_pred ccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcc---cCCCeEEEEecCCcccccC
Q 004954 499 RANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKS---YQRCEIKIIDLGSSCFQTD 575 (722)
Q Consensus 499 ~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~---~~~~~vkL~DFGls~~~~~ 575 (722)
..+|.+++....... .....-..+.+..|++.||++||+.+||||||||.||||.. .....++|+|||+++....
T Consensus 586 ~~sL~dlie~~~~d~--~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~ 663 (903)
T KOG1027|consen 586 ACSLQDLIESSGLDV--EMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAG 663 (903)
T ss_pred hhhHHHHHhccccch--hhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccccCC
Confidence 999999998741110 00111456788999999999999999999999999999986 3457899999999987554
Q ss_pred C------ccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHhhcCCCcHHHHhhhh
Q 004954 576 N------LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG-EVLFPNDAVVMILARIIGMLGPIDLEMLMQGQ 648 (722)
Q Consensus 576 ~------~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG-~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~ 648 (722)
. .....||-+|+|||++.......++||+||||++|+.++| .+||...-.. -.+|.. |
T Consensus 664 ~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R--~~NIl~--~----------- 728 (903)
T KOG1027|consen 664 GKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLER--QANILT--G----------- 728 (903)
T ss_pred CcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHh--hhhhhc--C-----------
Confidence 3 2345789999999999998888999999999999999995 9999764221 122210 0
Q ss_pred hhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCC
Q 004954 649 EIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWL 718 (722)
Q Consensus 649 ~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf 718 (722)
.+. +. .++ ...+.+..+||.+||..+|..||+|.++|.||+|
T Consensus 729 --------~~~----------L~-------~L~---~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~HPlF 770 (903)
T KOG1027|consen 729 --------NYT----------LV-------HLE---PLPDCEAKDLISRMLNPDPQLRPSATDVLNHPLF 770 (903)
T ss_pred --------ccc----------ee-------eec---cCchHHHHHHHHHhcCCCcccCCCHHHHhCCCcc
Confidence 000 00 000 0111257899999999999999999999999998
No 391
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.97 E-value=1.7e-30 Score=282.57 Aligned_cols=255 Identities=20% Similarity=0.239 Sum_probs=204.0
Q ss_pred ecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 004954 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (722)
Q Consensus 412 l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~--~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (722)
-..+..+.++||+|-||.|.+++- ..+..||+|+++.+. .....+.+|+++|.+|+ ||||++++++|..++
T Consensus 536 PRs~L~~~ekiGeGqFGEVhLCev-eg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLk------hPNIveLvGVC~~De 608 (807)
T KOG1094|consen 536 PRSRLRFKEKIGEGQFGEVHLCEV-EGPLKVAVKILRPDATKNARNDFLKEIKILSRLK------HPNIVELLGVCVQDD 608 (807)
T ss_pred chhheehhhhhcCcccceeEEEEe-cCceEEEEeecCcccchhHHHHHHHHHHHHhccC------CCCeeEEEeeeecCC
Confidence 346788999999999999999984 446999999998643 34467889999998885 789999999999999
Q ss_pred eEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecC
Q 004954 490 HLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (722)
Q Consensus 490 ~l~iVmEy~~-gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFG 568 (722)
.+++|||||+ |.|.+++..+.... +.......|+.||+.||+||.+.++|||||.++|||++. +.++||+|||
T Consensus 609 PicmI~EYmEnGDLnqFl~aheapt----~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~--e~~iKiadfg 682 (807)
T KOG1094|consen 609 PLCMITEYMENGDLNQFLSAHELPT----AETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDG--EFTIKIADFG 682 (807)
T ss_pred chHHHHHHHhcCcHHHHHHhccCcc----cccchhHHHHHHHHHHHHHHHhhchhhccccccceeecC--cccEEecCcc
Confidence 9999999997 67878777654332 344556679999999999999999999999999999995 8999999999
Q ss_pred CcccccCCccc-----cccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh--CCCCCCCChHHHHHHHHHhhcCCCcH
Q 004954 569 SSCFQTDNLCL-----YVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT--GEVLFPNDAVVMILARIIGMLGPIDL 641 (722)
Q Consensus 569 ls~~~~~~~~~-----~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt--G~~PF~~~~~~e~l~~i~~~lg~~~~ 641 (722)
+++.+-..... .+-+.+|||+|.+.-.+++.++|+|++|+++||+++ .+.||.....+++..+.-.++...+.
T Consensus 683 msR~lysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~ 762 (807)
T KOG1094|consen 683 MSRNLYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGR 762 (807)
T ss_pred cccccccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCc
Confidence 99854443332 234788999999999999999999999999999876 78999887777766665433321110
Q ss_pred HHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhC
Q 004954 642 EMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDH 715 (722)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~H 715 (722)
+ .....+...+..+.+||.+||..|-++||+.+++..|
T Consensus 763 ---------------------------~---------~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~ 800 (807)
T KOG1094|consen 763 ---------------------------Q---------VVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLF 800 (807)
T ss_pred ---------------------------c---------eeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHH
Confidence 0 1111233445668899999999999999999998543
No 392
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=6.2e-29 Score=264.45 Aligned_cols=260 Identities=22% Similarity=0.329 Sum_probs=197.2
Q ss_pred CCCCcceeeCceecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCcee
Q 004954 400 ENKDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHIL 479 (722)
Q Consensus 400 ~~~~~pi~~~~~l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~~~~~~~~E~~il~~L~~~~~~~hpnIv 479 (722)
++..+|+.....++.+.++.+.||+|.||.||+|.+ -|+.||||++....+ +.+.+|.+|.+.+- +.|+||+
T Consensus 197 SGSGlplLVQRTiarqI~L~e~IGkGRyGEVwrG~w--rGe~VAVKiF~srdE--~SWfrEtEIYqTvm----LRHENIL 268 (513)
T KOG2052|consen 197 SGSGLPLLVQRTIARQIVLQEIIGKGRFGEVWRGRW--RGEDVAVKIFSSRDE--RSWFRETEIYQTVM----LRHENIL 268 (513)
T ss_pred CCCCchhHhHHhhhheeEEEEEecCccccceeeccc--cCCceEEEEecccch--hhhhhHHHHHHHHH----hccchhh
Confidence 456788888999999999999999999999999986 588999999976544 56788888888764 3489999
Q ss_pred EEEEEEEec----CeEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHH-----C---CCcccc
Q 004954 480 RLYDYFYHL----EHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS-----L---GIIHCD 546 (722)
Q Consensus 480 ~l~~~f~~~----~~l~iVmEy~~-gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs-----~---gIvHrD 546 (722)
.+++.-... ..+++|++|.+ |+|.+++...- ++......++..++.||++||. + .|.|||
T Consensus 269 gFIaaD~~~~gs~TQLwLvTdYHe~GSL~DyL~r~t-------v~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRD 341 (513)
T KOG2052|consen 269 GFIAADNKDNGSWTQLWLVTDYHEHGSLYDYLNRNT-------VTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRD 341 (513)
T ss_pred hhhhccccCCCceEEEEEeeecccCCcHHHHHhhcc-------CCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccc
Confidence 999986544 36999999997 89999987532 8899999999999999999994 2 499999
Q ss_pred CCCCceEEcccCCCeEEEEecCCcccccC-------CccccccCCcccCchhhcCCC-----CC-chhhHHHHHHHHHHH
Q 004954 547 LKPENILIKSYQRCEIKIIDLGSSCFQTD-------NLCLYVQSRSYRAPEVIIGLP-----YD-QKIDLWSLGCILAEL 613 (722)
Q Consensus 547 LKp~NILl~~~~~~~vkL~DFGls~~~~~-------~~~~~~gt~~y~APE~l~~~~-----~s-~ksDIWSLGviL~el 613 (722)
||..||||.+ ++.+.|+|+|+|-.... .....+||.+|||||++...- -+ ..+||||||.++||+
T Consensus 342 lKSKNILVKk--n~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEi 419 (513)
T KOG2052|consen 342 LKSKNILVKK--NGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEI 419 (513)
T ss_pred cccccEEEcc--CCcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHH
Confidence 9999999996 88999999999854332 345579999999999986532 12 358999999999999
Q ss_pred HhC----------CCCCCCC----hHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccch
Q 004954 614 WTG----------EVLFPND----AVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESS 679 (722)
Q Consensus 614 ltG----------~~PF~~~----~~~e~l~~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~ 679 (722)
... ++||.+. ...+.+.+++ . ..+++..+|..+.
T Consensus 420 arRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVV---------------------C-----------v~~~RP~ipnrW~ 467 (513)
T KOG2052|consen 420 ARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVV---------------------C-----------VQKLRPNIPNRWK 467 (513)
T ss_pred HHHhhcCCEehhhcCCcccCCCCCCCHHHHhcce---------------------e-----------ecccCCCCCcccc
Confidence 752 6677432 1122222221 0 1223333343222
Q ss_pred hhhhcccCcHHHHHHHHHhcccCCCCCcCHHHH
Q 004954 680 LEHHLQFSDAFFIDFVRTLLEINPQRRPTAREA 712 (722)
Q Consensus 680 l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~El 712 (722)
-.... ..+..+|+.||..||.-|.||--+
T Consensus 468 s~~~l----~~m~klMkeCW~~Np~aRltALri 496 (513)
T KOG2052|consen 468 SDPAL----RVMAKLMKECWYANPAARLTALRI 496 (513)
T ss_pred cCHHH----HHHHHHHHHhhcCCchhhhHHHHH
Confidence 11111 246789999999999999987443
No 393
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.96 E-value=4.1e-29 Score=242.74 Aligned_cols=213 Identities=25% Similarity=0.383 Sum_probs=175.0
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~--~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (722)
+....+..||+|++|.|-+.++..+|+..|+|.++..- ....+.++|+.+..+ ..++|.+|++|+.+.....+
T Consensus 46 d~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r-----~~~CPf~V~FyGa~~regdv 120 (282)
T KOG0984|consen 46 DDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMR-----TVDCPFTVHFYGALFREGDV 120 (282)
T ss_pred hhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhcc-----CCCCCeEEEeehhhhccccE
Confidence 34445567999999999999999999999999987543 233444455554433 34679999999999999999
Q ss_pred EEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHC-CCccccCCCCceEEcccCCCeEEEEecCCc
Q 004954 492 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL-GIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (722)
Q Consensus 492 ~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~-gIvHrDLKp~NILl~~~~~~~vkL~DFGls 570 (722)
+|.||.|.-+|..+.+.--..+ ..+++.-+-+|+..++.||.|||++ .+||||+||+||||+. +|++||+|||.+
T Consensus 121 wIcME~M~tSldkfy~~v~~~g--~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~--~GqVKiCDFGIs 196 (282)
T KOG0984|consen 121 WICMELMDTSLDKFYRKVLKKG--GTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINY--DGQVKICDFGIS 196 (282)
T ss_pred EEeHHHhhhhHHHHHHHHHhcC--CcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEcc--CCcEEEcccccc
Confidence 9999999988877766544333 3389999999999999999999975 8999999999999996 999999999999
Q ss_pred ccccCCccc--cccCCcccCchhhcC----CCCCchhhHHHHHHHHHHHHhCCCCCCC-ChHHHHHHHHHhh
Q 004954 571 CFQTDNLCL--YVQSRSYRAPEVIIG----LPYDQKIDLWSLGCILAELWTGEVLFPN-DAVVMILARIIGM 635 (722)
Q Consensus 571 ~~~~~~~~~--~~gt~~y~APE~l~~----~~~s~ksDIWSLGviL~elltG~~PF~~-~~~~e~l~~i~~~ 635 (722)
..+.+.... -.|...|+|||.+.. ..|+-++||||||+++.||.+++.||+. .++.+++.+++..
T Consensus 197 G~L~dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVee 268 (282)
T KOG0984|consen 197 GYLVDSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVEE 268 (282)
T ss_pred eeehhhhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhcC
Confidence 887766433 467888999999853 4689999999999999999999999976 5677888887744
No 394
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.96 E-value=1.4e-28 Score=302.41 Aligned_cols=186 Identities=21% Similarity=0.302 Sum_probs=152.0
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEE
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFI 493 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~i 493 (722)
..|+..+.||+|+||.||+|++..+++.||||.+..... ....|+++++.+ .||||+++++++...+..++
T Consensus 690 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~l~~l------~HpnIv~~~~~~~~~~~~~l 760 (968)
T PLN00113 690 SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS---IPSSEIADMGKL------QHPNIVKLIGLCRSEKGAYL 760 (968)
T ss_pred hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc---ccHHHHHHHhhC------CCCCcceEEEEEEcCCCCEE
Confidence 456777899999999999999999999999999865432 123445555555 58999999999999999999
Q ss_pred EEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHH---HCCCccccCCCCceEEcccCCCeEEEEecCC
Q 004954 494 VCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLH---SLGIIHCDLKPENILIKSYQRCEIKIIDLGS 569 (722)
Q Consensus 494 VmEy~~-gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLH---s~gIvHrDLKp~NILl~~~~~~~vkL~DFGl 569 (722)
||||++ |+|.++++. +++..+..|+.|++.||+||| +.+|+||||||+||+++. +...++. ||.
T Consensus 761 v~Ey~~~g~L~~~l~~---------l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~--~~~~~~~-~~~ 828 (968)
T PLN00113 761 IHEYIEGKNLSEVLRN---------LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDG--KDEPHLR-LSL 828 (968)
T ss_pred EEeCCCCCcHHHHHhc---------CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECC--CCceEEE-ecc
Confidence 999997 467666641 788899999999999999999 669999999999999986 4445544 555
Q ss_pred cccccCCccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCC
Q 004954 570 SCFQTDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFP 621 (722)
Q Consensus 570 s~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~ 621 (722)
+...... ....+|+.|+|||++.+..++.++|||||||++|||+||+.||.
T Consensus 829 ~~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~ 879 (968)
T PLN00113 829 PGLLCTD-TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPAD 879 (968)
T ss_pred ccccccC-CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCC
Confidence 4332211 22367899999999999999999999999999999999999994
No 395
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.96 E-value=4.3e-29 Score=267.35 Aligned_cols=261 Identities=22% Similarity=0.250 Sum_probs=191.9
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC----
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE---- 489 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~---- 489 (722)
...+++++||+|+||.||+|+ -+++.||||++..... +.+.+|..|..... ..|+||++++++-....
T Consensus 210 ~pl~l~eli~~Grfg~V~Kaq--L~~~~VAVKifp~~~k--qs~~~Ek~Iy~lp~----m~h~nIl~Fi~~ekr~t~~~~ 281 (534)
T KOG3653|consen 210 DPLQLLELIGRGRFGCVWKAQ--LDNRLVAVKIFPEQEK--QSFQNEKNIYSLPG----MKHENILQFIGAEKRGTADRM 281 (534)
T ss_pred CchhhHHHhhcCccceeehhh--ccCceeEEEecCHHHH--HHHHhHHHHHhccC----ccchhHHHhhchhccCCcccc
Confidence 456778899999999999997 4669999999976543 56778888887764 46999999999877555
Q ss_pred eEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHH---------CCCccccCCCCceEEcccCC
Q 004954 490 HLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS---------LGIIHCDLKPENILIKSYQR 559 (722)
Q Consensus 490 ~l~iVmEy~~-gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs---------~gIvHrDLKp~NILl~~~~~ 559 (722)
.++||++|.+ |+|.++++.+- +++....+|+..|++||+|||+ ..|+|||||..||||.. +
T Consensus 282 eywLVt~fh~kGsL~dyL~~nt-------isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~--D 352 (534)
T KOG3653|consen 282 EYWLVTEFHPKGSLCDYLKANT-------ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKN--D 352 (534)
T ss_pred ceeEEeeeccCCcHHHHHHhcc-------ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEcc--C
Confidence 7899999996 89999998654 8999999999999999999995 35999999999999996 8
Q ss_pred CeEEEEecCCcccccCC-----ccccccCCcccCchhhcCCC-CC-----chhhHHHHHHHHHHHHhCCCCCCCChHHHH
Q 004954 560 CEIKIIDLGSSCFQTDN-----LCLYVQSRSYRAPEVIIGLP-YD-----QKIDLWSLGCILAELWTGEVLFPNDAVVMI 628 (722)
Q Consensus 560 ~~vkL~DFGls~~~~~~-----~~~~~gt~~y~APE~l~~~~-~s-----~ksDIWSLGviL~elltG~~PF~~~~~~e~ 628 (722)
++..|+|||+|..+... ....+||.+|||||++.+.- .. .+.||||+|.+||||++....+....+.++
T Consensus 353 lTccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Y 432 (534)
T KOG3653|consen 353 LTCCIADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEY 432 (534)
T ss_pred CcEEeeccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcc
Confidence 99999999999765432 22368999999999997643 11 368999999999999997665532222222
Q ss_pred HHHHHhhcCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcC
Q 004954 629 LARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPT 708 (722)
Q Consensus 629 l~~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpT 708 (722)
.......+|.-|.-. ++...+ -..+.+..+|..+. .+ ..-..+++.+..||+.||+-|.|
T Consensus 433 qlpfe~evG~hPt~e-----~mq~~V-----------V~kK~RP~~p~~W~--~h--~~~~~l~et~EeCWDhDaeARLT 492 (534)
T KOG3653|consen 433 QLPFEAEVGNHPTLE-----EMQELV-----------VRKKQRPKIPDAWR--KH--AGMAVLCETIEECWDHDAEARLT 492 (534)
T ss_pred cCchhHHhcCCCCHH-----HHHHHH-----------HhhccCCCChhhhh--cC--ccHHHHHHHHHHHcCCchhhhhh
Confidence 222233334333211 111111 11223333333221 11 12356899999999999999999
Q ss_pred HHH
Q 004954 709 ARE 711 (722)
Q Consensus 709 a~E 711 (722)
|.=
T Consensus 493 A~C 495 (534)
T KOG3653|consen 493 AGC 495 (534)
T ss_pred hHH
Confidence 753
No 396
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.96 E-value=4.5e-29 Score=271.46 Aligned_cols=198 Identities=29% Similarity=0.516 Sum_probs=174.3
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHh---------HHHHHHHHHHhcccCCCCCCceeEEEEE
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQ---------SLDEIKLLKLVNKNDPADEHHILRLYDY 484 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~~~~~---------~~~E~~il~~L~~~~~~~hpnIv~l~~~ 484 (722)
..|..++.||.|+||.|++|.++.+...|+||.+.+++-..+. .-.|+.||..|+.+ .|+||++++++
T Consensus 561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~---sH~NIlKlLdf 637 (772)
T KOG1152|consen 561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKH---SHENILKLLDF 637 (772)
T ss_pred ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhc---Cccchhhhhhe
Confidence 3499999999999999999999999999999999876543333 33599999999865 59999999999
Q ss_pred EEecCeEEEEEEcccc--chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeE
Q 004954 485 FYHLEHLFIVCELLRA--NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI 562 (722)
Q Consensus 485 f~~~~~l~iVmEy~~g--sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~v 562 (722)
|++++..||+||-.+. +|.+++..... +++.++..|++|++.|+++||+.||||||||-+||+++. +|-+
T Consensus 638 FEddd~yyl~te~hg~gIDLFd~IE~kp~------m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~--~g~~ 709 (772)
T KOG1152|consen 638 FEDDDYYYLETEVHGEGIDLFDFIEFKPR------MDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDS--NGFV 709 (772)
T ss_pred eecCCeeEEEecCCCCCcchhhhhhccCc------cchHHHHHHHHHHHhccccccccCceecccccccEEEec--CCeE
Confidence 9999999999998863 67777776543 899999999999999999999999999999999999996 8999
Q ss_pred EEEecCCcccc-cCCccccccCCcccCchhhcCCCCC-chhhHHHHHHHHHHHHhCCCCCCC
Q 004954 563 KIIDLGSSCFQ-TDNLCLYVQSRSYRAPEVIIGLPYD-QKIDLWSLGCILAELWTGEVLFPN 622 (722)
Q Consensus 563 kL~DFGls~~~-~~~~~~~~gt~~y~APE~l~~~~~s-~ksDIWSLGviL~elltG~~PF~~ 622 (722)
||+|||.+... ..+...++||..|.|||++.|.+|- ..-|||+||++||.++..+.||.+
T Consensus 710 klidfgsaa~~ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn 771 (772)
T KOG1152|consen 710 KLIDFGSAAYTKSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN 771 (772)
T ss_pred EEeeccchhhhcCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence 99999998765 4456678999999999999998864 678999999999999999999854
No 397
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.95 E-value=1.6e-27 Score=277.69 Aligned_cols=254 Identities=24% Similarity=0.360 Sum_probs=200.0
Q ss_pred eecCcEEEEEEeccCCCCceEEEEEC----C---CCcEEEEEEeecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEE
Q 004954 411 VIAGRYYVTEYLGSAAFSKVFQAQDL----H---TGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRL 481 (722)
Q Consensus 411 ~l~~rY~i~~~LG~G~fG~Vy~a~d~----~---tg~~vAvKil~~~~--~~~~~~~~E~~il~~L~~~~~~~hpnIv~l 481 (722)
+..++..+.+.||+|+||.|++|.-. . ....||||.++... .....+..|+++++.+. .|+||+.+
T Consensus 293 ~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g-----~H~niv~l 367 (609)
T KOG0200|consen 293 IPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELG-----KHPNIVNL 367 (609)
T ss_pred echhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhc-----CCcchhhh
Confidence 33445567779999999999999732 1 14679999987543 44677889999999986 48899999
Q ss_pred EEEEEecCeEEEEEEccc-cchHHHHhhhh---------ccCCC-cccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCC
Q 004954 482 YDYFYHLEHLFIVCELLR-ANLYEFQKFNQ---------ESGGE-AYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPE 550 (722)
Q Consensus 482 ~~~f~~~~~l~iVmEy~~-gsLl~~l~~~~---------~~~~~-~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~ 550 (722)
++++...+.+++|+||+. |+|+.+++..+ ..... ..++...+..++.||+.|++||++..+|||||..+
T Consensus 368 lG~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaR 447 (609)
T KOG0200|consen 368 LGACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAAR 447 (609)
T ss_pred eeeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhh
Confidence 999999999999999997 78999998777 11111 23899999999999999999999999999999999
Q ss_pred ceEEcccCCCeEEEEecCCcccccCCcccc-c-----cCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCC
Q 004954 551 NILIKSYQRCEIKIIDLGSSCFQTDNLCLY-V-----QSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPND 623 (722)
Q Consensus 551 NILl~~~~~~~vkL~DFGls~~~~~~~~~~-~-----gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~ 623 (722)
|||++. +..+||+|||+++......... . -+..|||||.+....++.++||||+|++||||+| |..||++.
T Consensus 448 NVLi~~--~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~ 525 (609)
T KOG0200|consen 448 NVLITK--NKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGI 525 (609)
T ss_pred hEEecC--CCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCC
Confidence 999996 7899999999998544432221 1 2345999999999999999999999999999999 99999884
Q ss_pred h-HHHHHHHHHhhcCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccC
Q 004954 624 A-VVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEIN 702 (722)
Q Consensus 624 ~-~~e~l~~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~d 702 (722)
. ..+++..+.. +.+...| .....++.++++.||+.+
T Consensus 526 ~~~~~l~~~l~~----------------------------------G~r~~~P---------~~c~~eiY~iM~~CW~~~ 562 (609)
T KOG0200|consen 526 PPTEELLEFLKE----------------------------------GNRMEQP---------EHCSDEIYDLMKSCWNAD 562 (609)
T ss_pred CcHHHHHHHHhc----------------------------------CCCCCCC---------CCCCHHHHHHHHHHhCCC
Confidence 4 3344332211 0011111 223567889999999999
Q ss_pred CCCCcCHHHHHh
Q 004954 703 PQRRPTAREALD 714 (722)
Q Consensus 703 P~kRpTa~ElL~ 714 (722)
|++||+..++.+
T Consensus 563 p~~RP~F~~~~~ 574 (609)
T KOG0200|consen 563 PEDRPTFSECVE 574 (609)
T ss_pred cccCCCHHHHHH
Confidence 999999998864
No 398
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.94 E-value=2.1e-28 Score=270.15 Aligned_cols=255 Identities=26% Similarity=0.399 Sum_probs=202.4
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchh-hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 004954 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD-FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (722)
Q Consensus 413 ~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~-~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (722)
.++|..+..+|+|.||.||+++|+.+++..|+|+++.... ...-+..|+-+++..+ ||||+.+++.+...+.+
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~------h~nivay~gsylr~dkl 87 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCR------HPNIVAYFGSYLRRDKL 87 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCC------CcChHHHHhhhhhhcCc
Confidence 3679999999999999999999999999999999987542 3445566777776664 78999999999999999
Q ss_pred EEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCc
Q 004954 492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (722)
Q Consensus 492 ~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 570 (722)
+|+||||+| +|.+....- .++++.++..+.+..+++|+|||++|-+|||||-.|||++. .+.+||+|||.+
T Consensus 88 wicMEycgggslQdiy~~T------gplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd--~gDvklaDfgvs 159 (829)
T KOG0576|consen 88 WICMEYCGGGSLQDIYHVT------GPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTD--EGDVKLADFGVS 159 (829)
T ss_pred EEEEEecCCCcccceeeec------ccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecc--cCceeecccCch
Confidence 999999986 555543322 23889999999999999999999999999999999999996 888999999998
Q ss_pred ccccCC---ccccccCCcccCchhhc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHH
Q 004954 571 CFQTDN---LCLYVQSRSYRAPEVII---GLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEML 644 (722)
Q Consensus 571 ~~~~~~---~~~~~gt~~y~APE~l~---~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~ 644 (722)
...+.. ...+.|||.|||||+.. ...|....|||++|+...|+-.-++|--...+...+..+.+-.-.
T Consensus 160 aqitati~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~q------ 233 (829)
T KOG0576|consen 160 AQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQ------ 233 (829)
T ss_pred hhhhhhhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCC------
Confidence 776543 34578999999999963 456889999999999999998877776544443333333211100
Q ss_pred hhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCCC
Q 004954 645 MQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 720 (722)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~~ 720 (722)
.|.. .......+.|.+|++.+|..+|.+|||++.+|+|||.+.
T Consensus 234 -----------------------------pp~l----kDk~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~ 276 (829)
T KOG0576|consen 234 -----------------------------PPTL----KDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQ 276 (829)
T ss_pred -----------------------------CCcc----cCCccchHHHHHHHHHHhcCCCccCCChhhheeceeecc
Confidence 0100 001112356899999999999999999999999999865
No 399
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.94 E-value=5.9e-26 Score=223.66 Aligned_cols=208 Identities=42% Similarity=0.683 Sum_probs=178.9
Q ss_pred eccCCCCceEEEEECCCCcEEEEEEeecchh--hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEEEccc
Q 004954 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD--FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLR 499 (722)
Q Consensus 422 LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~--~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~iVmEy~~ 499 (722)
||.|.+|.||++.+..+++.+++|++..... ....+.+|+.+++.+.+ ++|+++++++......+++||++.
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~------~~i~~~~~~~~~~~~~~~~~e~~~ 74 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNH------PNIVKLYGVFEDENHLYLVMEYCE 74 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCC------CCeeeEeeeeecCCeEEEEEecCC
Confidence 6899999999999988899999999987654 24678888888888864 699999999999999999999999
Q ss_pred -cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCcccccCC--
Q 004954 500 -ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDN-- 576 (722)
Q Consensus 500 -gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~~~-- 576 (722)
++|.+++.... ..++...++.++.+++.+|.+||+.|++|+||+|.||+++.. ...++|+|||.+......
T Consensus 75 ~~~l~~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~-~~~~~l~d~~~~~~~~~~~~ 148 (215)
T cd00180 75 GGSLKDLLKENE-----GKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSD-NGKVKLADFGLSKLLTSDKS 148 (215)
T ss_pred CCcHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCC-CCcEEEecCCceEEccCCcc
Confidence 57777665432 238899999999999999999999999999999999999841 578999999998766554
Q ss_pred -ccccccCCcccCchhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhh
Q 004954 577 -LCLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYF 654 (722)
Q Consensus 577 -~~~~~gt~~y~APE~l~~~-~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~~~~~~~ 654 (722)
.....+...|++||.+... .++.+.|+|+||+++++|
T Consensus 149 ~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l----------------------------------------- 187 (215)
T cd00180 149 LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL----------------------------------------- 187 (215)
T ss_pred hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH-----------------------------------------
Confidence 3345678889999999887 788999999999999999
Q ss_pred cccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCC
Q 004954 655 TKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHP 716 (722)
Q Consensus 655 ~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HP 716 (722)
..+.++|.+||+.||.+||++.++++|+
T Consensus 188 ----------------------------------~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 188 ----------------------------------PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred ----------------------------------HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 1256899999999999999999999986
No 400
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.94 E-value=1.9e-27 Score=266.82 Aligned_cols=242 Identities=22% Similarity=0.264 Sum_probs=191.3
Q ss_pred EEEEEEeccCCCCceEEEEECCCCc----EEEEEEeecchh--hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 004954 416 YYVTEYLGSAAFSKVFQAQDLHTGV----DVCLKIIKNDKD--FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (722)
Q Consensus 416 Y~i~~~LG~G~fG~Vy~a~d~~tg~----~vAvKil~~~~~--~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (722)
.+..++||+|+||+||+|.+...|+ +||||++..... ....+++|.-+|..| +|||++++++++....
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masl------dHpnl~RLLgvc~~s~ 771 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASL------DHPNLLRLLGVCMLST 771 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcC------CCchHHHHhhhcccch
Confidence 4456789999999999999866554 688888865432 234555555555544 6899999999998766
Q ss_pred eEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecC
Q 004954 490 HLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (722)
Q Consensus 490 ~l~iVmEy~~-gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFG 568 (722)
+-||++|++ |.|+++++..+.. +-.+..+.|..||++||.|||+++++||||-.+||||.+ ...+||.|||
T Consensus 772 -~qlvtq~mP~G~LlDyvr~hr~~-----igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVks--P~hvkitdfg 843 (1177)
T KOG1025|consen 772 -LQLVTQLMPLGCLLDYVREHRDN-----IGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKS--PNHVKITDFG 843 (1177)
T ss_pred -HHHHHHhcccchHHHHHHHhhcc-----ccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecC--CCeEEEEecc
Confidence 889999998 6899999876543 778899999999999999999999999999999999996 7789999999
Q ss_pred CcccccCCcccc-----ccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcCCCcHH
Q 004954 569 SSCFQTDNLCLY-----VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLE 642 (722)
Q Consensus 569 ls~~~~~~~~~~-----~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~~i~~~lg~~~~~ 642 (722)
+++........+ .-.+.|+|-|.+...+|+.++||||+||++||+|| |..|+.+.+..++-.-+...
T Consensus 844 la~ll~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~g------- 916 (1177)
T KOG1025|consen 844 LAKLLAPDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKG------- 916 (1177)
T ss_pred hhhccCcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhcc-------
Confidence 998766543322 22566999999999999999999999999999999 99999888766654333210
Q ss_pred HHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHh
Q 004954 643 MLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 714 (722)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~ 714 (722)
.+..- ++..+.++.-+|.+||..|+..||+++++..
T Consensus 917 ---------------------------eRLsq---------PpiCtiDVy~~mvkCwmid~~~rp~fkel~~ 952 (1177)
T KOG1025|consen 917 ---------------------------ERLSQ---------PPICTIDVYMVMVKCWMIDADSRPTFKELAE 952 (1177)
T ss_pred ---------------------------ccCCC---------CCCccHHHHHHHHHHhccCcccCccHHHHHH
Confidence 00011 1223455678899999999999999998864
No 401
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.94 E-value=3.1e-28 Score=244.81 Aligned_cols=259 Identities=20% Similarity=0.270 Sum_probs=197.1
Q ss_pred ecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEE-EEecCe
Q 004954 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDY-FYHLEH 490 (722)
Q Consensus 412 l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~-f~~~~~ 490 (722)
+.+.|.|.+.||+|.||.+-+++++.+++.+++|.++........+.+|..---.|. .|.||+.-|++ |++.+.
T Consensus 22 l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls-----~H~hIi~tY~vaFqt~d~ 96 (378)
T KOG1345|consen 22 LEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLS-----PHQHIIDTYEVAFQTSDA 96 (378)
T ss_pred hhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeec-----cchhhhHHHHHHhhcCce
Confidence 467899999999999999999999999999999999877666667777765444443 47799987765 677888
Q ss_pred EEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCC
Q 004954 491 LFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS 569 (722)
Q Consensus 491 l~iVmEy~~-gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGl 569 (722)
..++|||++ |+|.+.+... .+-+.....++.|++.||.|||++++||||||.+||||-..+...|||+|||.
T Consensus 97 YvF~qE~aP~gdL~snv~~~-------GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~ 169 (378)
T KOG1345|consen 97 YVFVQEFAPRGDLRSNVEAA-------GIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGL 169 (378)
T ss_pred EEEeeccCccchhhhhcCcc-------cccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeeccc
Confidence 999999998 6666655432 27788899999999999999999999999999999999766677999999999
Q ss_pred cccccCCccccccCCcccCchhhcCCC-----CCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHH
Q 004954 570 SCFQTDNLCLYVQSRSYRAPEVIIGLP-----YDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEML 644 (722)
Q Consensus 570 s~~~~~~~~~~~gt~~y~APE~l~~~~-----~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~ 644 (722)
++..+........+..|.+||.+...+ ....+|||.||+++|.+|||++||+.....+ .+.-.|
T Consensus 170 t~k~g~tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d-----------~~Y~~~ 238 (378)
T KOG1345|consen 170 TRKVGTTVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMD-----------KPYWEW 238 (378)
T ss_pred ccccCceehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccC-----------chHHHH
Confidence 987776665566678899999876432 4567999999999999999999997432211 111111
Q ss_pred hhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCC---cCHHHHHhCCCC
Q 004954 645 MQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRR---PTAREALDHPWL 718 (722)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kR---pTa~ElL~HPwf 718 (722)
..|+.. ....++..+...++.+..+.++-|..+|.+| .++...-...|.
T Consensus 239 ~~w~~r-------------------------k~~~~P~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~w~ 290 (378)
T KOG1345|consen 239 EQWLKR-------------------------KNPALPKKFNPFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKCLWK 290 (378)
T ss_pred HHHhcc-------------------------cCccCchhhcccCHHHHHHHHHhcCCcccccchhHHHHHHHHHHHH
Confidence 111110 0112333344456778899999999999999 666665555553
No 402
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.93 E-value=4e-25 Score=222.53 Aligned_cols=205 Identities=37% Similarity=0.565 Sum_probs=172.0
Q ss_pred EEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchh--hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEE
Q 004954 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD--FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFI 493 (722)
Q Consensus 416 Y~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~--~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~i 493 (722)
|.+.+.||.|++|.||++.+..+++.+|+|.+..... ....+.+|+..++.++ |+|++++++.+......++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~------~~~i~~~~~~~~~~~~~~~ 74 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLK------HPNIVKLYGVFEDPEPLYL 74 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCC------CCChhhheeeeecCCceEE
Confidence 5678899999999999999988899999999976543 3566777888888773 6799999999999899999
Q ss_pred EEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCccc
Q 004954 494 VCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF 572 (722)
Q Consensus 494 VmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~ 572 (722)
++|++.+ +|.+.+...... +++..+..++.+++.+|.+||+.+++|+||+|.||+++. +..++|+|||.+..
T Consensus 75 v~e~~~~~~L~~~~~~~~~~-----~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~--~~~~~l~d~g~~~~ 147 (225)
T smart00221 75 VMEYCEGGDLFDYLRKKGGK-----LSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGM--DGLVKLADFGLARF 147 (225)
T ss_pred EEeccCCCCHHHHHHhcccC-----CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC--CCCEEEeeCceeeE
Confidence 9999987 777766543211 678899999999999999999999999999999999996 58899999999877
Q ss_pred ccCCc----cccccCCcccCchhh-cCCCCCchhhHHHHHHHHHHHHhCCCCCCC--ChHHHHHHHHH
Q 004954 573 QTDNL----CLYVQSRSYRAPEVI-IGLPYDQKIDLWSLGCILAELWTGEVLFPN--DAVVMILARII 633 (722)
Q Consensus 573 ~~~~~----~~~~gt~~y~APE~l-~~~~~s~ksDIWSLGviL~elltG~~PF~~--~~~~e~l~~i~ 633 (722)
..... ....++..|++||.+ ....++.++|+|+||+++++|++|+.||.. .+...+...+.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~~~~~~~~~ 215 (225)
T smart00221 148 IHRDLAALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSGEGEFTSLLSDVWS 215 (225)
T ss_pred ecCcccccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccccchhHHHHHHHHh
Confidence 65543 445678889999999 667788899999999999999999999977 44445555554
No 403
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.93 E-value=1.1e-26 Score=279.84 Aligned_cols=194 Identities=19% Similarity=0.215 Sum_probs=143.7
Q ss_pred ceeEEEEEE-------EecCeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCC
Q 004954 477 HILRLYDYF-------YHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKP 549 (722)
Q Consensus 477 nIv~l~~~f-------~~~~~l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp 549 (722)
||.+++++| .....++++||++.++|.+++... ...+++.+++.+++||+.||.|||++||+||||||
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~L~~~l~~~-----~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP 108 (793)
T PLN00181 34 YVRSLLGSHKEGNLDGLDDDSIVRALECEDVSLRQWLDNP-----DRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRP 108 (793)
T ss_pred HHHHhhcccCCccccccccchhhhhhccCCccHHHHHhcc-----cccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCc
Confidence 677777776 233567889999999999888632 12389999999999999999999999999999999
Q ss_pred CceEEcc-----------------cCCCeEEEEecCCcccccCC-------------------ccccccCCcccCchhhc
Q 004954 550 ENILIKS-----------------YQRCEIKIIDLGSSCFQTDN-------------------LCLYVQSRSYRAPEVII 593 (722)
Q Consensus 550 ~NILl~~-----------------~~~~~vkL~DFGls~~~~~~-------------------~~~~~gt~~y~APE~l~ 593 (722)
+||||+. +.++.+||+|||+++..... ....++|+.|+|||++.
T Consensus 109 ~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~ 188 (793)
T PLN00181 109 SCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDN 188 (793)
T ss_pred hhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhc
Confidence 9999963 23456778888877532110 01135788999999999
Q ss_pred CCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhcccccchhhhhcccccccc
Q 004954 594 GLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYI 673 (722)
Q Consensus 594 ~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (722)
+..++.++|||||||+||||++|.+|+.... ..+..+....
T Consensus 189 ~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~--~~~~~~~~~~------------------------------------- 229 (793)
T PLN00181 189 GSSSNCASDVYRLGVLLFELFCPVSSREEKS--RTMSSLRHRV------------------------------------- 229 (793)
T ss_pred cCCCCchhhhhhHHHHHHHHhhCCCchhhHH--HHHHHHHHhh-------------------------------------
Confidence 9999999999999999999999988864321 1111111000
Q ss_pred CCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCCC
Q 004954 674 IPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQH 720 (722)
Q Consensus 674 ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~~ 720 (722)
.|... . ...+...+++.+||+.||.+||++.|+|+||||..
T Consensus 230 ~~~~~-~-----~~~~~~~~~~~~~L~~~P~~Rps~~eil~h~~~~~ 270 (793)
T PLN00181 230 LPPQI-L-----LNWPKEASFCLWLLHPEPSCRPSMSELLQSEFINE 270 (793)
T ss_pred cChhh-h-----hcCHHHHHHHHHhCCCChhhCcChHHHhhchhhhh
Confidence 00000 0 00123568899999999999999999999999975
No 404
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.93 E-value=4.4e-25 Score=227.62 Aligned_cols=226 Identities=22% Similarity=0.318 Sum_probs=197.3
Q ss_pred eecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCe
Q 004954 411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 490 (722)
Q Consensus 411 ~l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~ 490 (722)
+++-.|+|.++||+|+||.++.|++..++++||||.-.... ...++..|.+..+.|... ++|+.+|.+....-+
T Consensus 25 ~VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS-~APQLrdEYr~YKlL~g~-----~GIP~vYYFGqeG~~ 98 (449)
T KOG1165|consen 25 MVGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS-EAPQLRDEYRTYKLLGGT-----EGIPQVYYFGQEGKY 98 (449)
T ss_pred EecccceeccccccCcceeeecccccccCceEEEEeccccC-CcchHHHHHHHHHHHcCC-----CCCCceeeeccccch
Confidence 56778999999999999999999999999999999865433 347888999999999854 699999999999999
Q ss_pred EEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEccc---CCCeEEEEec
Q 004954 491 LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSY---QRCEIKIIDL 567 (722)
Q Consensus 491 l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~---~~~~vkL~DF 567 (722)
-.+|||+++.+|.+++..+.+. |+.+++..++.||+.-++++|++.+|+|||||+|+||... +...|.|+||
T Consensus 99 NiLVidLLGPSLEDLFD~CgR~-----FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDF 173 (449)
T KOG1165|consen 99 NILVIDLLGPSLEDLFDLCGRR-----FSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDF 173 (449)
T ss_pred hhhhhhhhCcCHHHHHHHhcCc-----ccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEec
Confidence 9999999999999999998765 9999999999999999999999999999999999999752 2347999999
Q ss_pred CCcccccCCcc----------ccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC---ChHHHHHHHHHh
Q 004954 568 GSSCFQTDNLC----------LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPN---DAVVMILARIIG 634 (722)
Q Consensus 568 Gls~~~~~~~~----------~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~---~~~~e~l~~i~~ 634 (722)
|+|+.+.++.+ ...||.+||+-...+|...|++.|+-|||.+++..|-|.+||++ .+..+-+++|-.
T Consensus 174 GmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe 253 (449)
T KOG1165|consen 174 GMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGE 253 (449)
T ss_pred cchhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhcc
Confidence 99998776643 25789999999999999999999999999999999999999977 456667777766
Q ss_pred hcCCCcHHHHhhh
Q 004954 635 MLGPIDLEMLMQG 647 (722)
Q Consensus 635 ~lg~~~~~~~~~~ 647 (722)
.....|.+.+..+
T Consensus 254 ~Kr~T~i~~Lc~g 266 (449)
T KOG1165|consen 254 TKRSTPIEVLCEG 266 (449)
T ss_pred ccccCCHHHHHhc
Confidence 6667777666543
No 405
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.92 E-value=1.4e-24 Score=215.36 Aligned_cols=226 Identities=21% Similarity=0.345 Sum_probs=191.3
Q ss_pred eecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCe
Q 004954 411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 490 (722)
Q Consensus 411 ~l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~ 490 (722)
++.++|+++++||+|+||.+|+|....+|..||||+-.... ...+...|.++.+.|+.. ..|+++..++....+
T Consensus 12 iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a-~hpqL~yEskvY~iL~~g-----~GiP~i~~y~~e~~y 85 (341)
T KOG1163|consen 12 IVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA-KHPQLLYESKVYRILQGG-----VGIPHIRHYGTEKDY 85 (341)
T ss_pred eeccceEEEEeecCCchhheeeeeeccCCceEEEEeecccC-CCcchhHHHHHHHHhccC-----CCCchhhhhcccccc
Confidence 45789999999999999999999999999999999876544 346788899999999875 478888888889999
Q ss_pred EEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCC-CeEEEEecCC
Q 004954 491 LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQR-CEIKIIDLGS 569 (722)
Q Consensus 491 l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~-~~vkL~DFGl 569 (722)
-.+||+.++.+|.+++..+... ++..+++.++-||+.-++|+|..++|||||||+|+|+.-+.. ..+.|+|||+
T Consensus 86 nvlVMdLLGPsLEdLfnfC~R~-----ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGL 160 (341)
T KOG1163|consen 86 NVLVMDLLGPSLEDLFNFCSRR-----FTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGL 160 (341)
T ss_pred ceeeeeccCccHHHHHHHHhhh-----hhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccc
Confidence 9999999999999999888765 999999999999999999999999999999999999864333 3699999999
Q ss_pred cccccCCc----------cccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC---hHHHHHHHHHhhc
Q 004954 570 SCFQTDNL----------CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPND---AVVMILARIIGML 636 (722)
Q Consensus 570 s~~~~~~~----------~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~---~~~e~l~~i~~~l 636 (722)
|+.+.+.. ....||..|.+--...+...++..|+-|+|.+|..+.-|.+||++. +..+-+++|.+..
T Consensus 161 aKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK 240 (341)
T KOG1163|consen 161 AKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKK 240 (341)
T ss_pred hhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhh
Confidence 97655432 2357899999999999989999999999999999999999999874 3444556666666
Q ss_pred CCCcHHHHhhh
Q 004954 637 GPIDLEMLMQG 647 (722)
Q Consensus 637 g~~~~~~~~~~ 647 (722)
-..+.+.+..+
T Consensus 241 ~s~~ie~LC~G 251 (341)
T KOG1163|consen 241 MSTPIEVLCKG 251 (341)
T ss_pred cCCCHHHHhCC
Confidence 66666655543
No 406
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.91 E-value=6.6e-24 Score=222.48 Aligned_cols=252 Identities=19% Similarity=0.227 Sum_probs=191.7
Q ss_pred ecCcEEEEEEeccCCCCceEEEEECCCC-----cEEEEEEeecchhh--hHhHHHHHHHHHHhcccCCCCCCceeEEEEE
Q 004954 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTG-----VDVCLKIIKNDKDF--FDQSLDEIKLLKLVNKNDPADEHHILRLYDY 484 (722)
Q Consensus 412 l~~rY~i~~~LG~G~fG~Vy~a~d~~tg-----~~vAvKil~~~~~~--~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~ 484 (722)
-..|++..-++-+|.||.||.|.+.... +.|-+|.++..... ...++.|-.++. ...|||++.+.++
T Consensus 282 ~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly------~~sH~nll~V~~V 355 (563)
T KOG1024|consen 282 QRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLY------GASHPNLLSVLGV 355 (563)
T ss_pred hhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHh------cCcCCCccceeEE
Confidence 3567888889999999999999765432 34556666544322 222333333333 2348999999999
Q ss_pred EEec-CeEEEEEEccc-cchHHHHhhhhccCC--CcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCC
Q 004954 485 FYHL-EHLFIVCELLR-ANLYEFQKFNQESGG--EAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRC 560 (722)
Q Consensus 485 f~~~-~~l~iVmEy~~-gsLl~~l~~~~~~~~--~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~ 560 (722)
.... ...++++.+++ |+|..++..++.... ...++..++..++.|++.|++|||+.|+||.||..+|++|+. ..
T Consensus 356 ~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd--~L 433 (563)
T KOG1024|consen 356 SIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDD--QL 433 (563)
T ss_pred EeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehh--he
Confidence 8754 56788899997 789988886654333 234667778889999999999999999999999999999995 78
Q ss_pred eEEEEecCCcccccCCcccccc-----CCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHh
Q 004954 561 EIKIIDLGSSCFQTDNLCLYVQ-----SRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIG 634 (722)
Q Consensus 561 ~vkL~DFGls~~~~~~~~~~~g-----t~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~~i~~ 634 (722)
++||+|=.+++..-.......| +..||+||.+....|+.++|+|||||+||||+| |+.||..-++.++..-+..
T Consensus 434 qVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylkd 513 (563)
T KOG1024|consen 434 QVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLKD 513 (563)
T ss_pred eEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHhc
Confidence 9999999998765544333333 567999999999999999999999999999999 9999988777666544421
Q ss_pred hcCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHh
Q 004954 635 MLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALD 714 (722)
Q Consensus 635 ~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~ 714 (722)
. + +. ..+.+.+.++..++.-||...|++||+.+|++.
T Consensus 514 G----------------------y------------Rl---------aQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~ 550 (563)
T KOG1024|consen 514 G----------------------Y------------RL---------AQPFNCPDELFTVMACCWALLPEERPSFSQLVI 550 (563)
T ss_pred c----------------------c------------ee---------cCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHH
Confidence 1 0 00 112345677889999999999999999999874
No 407
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.91 E-value=4.9e-23 Score=222.75 Aligned_cols=204 Identities=28% Similarity=0.343 Sum_probs=170.5
Q ss_pred cEEEEEEeccCCCCceEEEEECCCC-cEEEEEEeecchhh-hHhHHHHHHHHHHhcccCCCCCCceeEEEEEE-EecCeE
Q 004954 415 RYYVTEYLGSAAFSKVFQAQDLHTG-VDVCLKIIKNDKDF-FDQSLDEIKLLKLVNKNDPADEHHILRLYDYF-YHLEHL 491 (722)
Q Consensus 415 rY~i~~~LG~G~fG~Vy~a~d~~tg-~~vAvKil~~~~~~-~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f-~~~~~l 491 (722)
+|++.++||+|+||.||++.+..++ ..+|+|+....... ...+..|..++..+.. ...-++++++++.+ .....-
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~--~~~~~~~~~~~~~G~~~~~~~ 96 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEK--KNGPSHFPKLLDHGRSTEDFN 96 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhh--hcCCCCCCEEEEeccCCCcee
Confidence 8999999999999999999987774 68999988764322 2267789999999985 11235899999999 477889
Q ss_pred EEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccC-C--CeEEEEecC
Q 004954 492 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQ-R--CEIKIIDLG 568 (722)
Q Consensus 492 ~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~-~--~~vkL~DFG 568 (722)
+|||+.++.+|.++..... ...++..++..|+.|++.+|.+||+.|++||||||+|+++.... . ..+.|+|||
T Consensus 97 ~iVM~l~G~sL~dl~~~~~----~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfG 172 (322)
T KOG1164|consen 97 FIVMSLLGPSLEDLRKRNP----PGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFG 172 (322)
T ss_pred EEEEeccCccHHHHHHhCC----CCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecC
Confidence 9999999999999876544 23499999999999999999999999999999999999998532 1 579999999
Q ss_pred Ccc--ccc-C---------C-ccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCh
Q 004954 569 SSC--FQT-D---------N-LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDA 624 (722)
Q Consensus 569 ls~--~~~-~---------~-~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~ 624 (722)
+++ ... . . .....||..|+++.+..+...+++.|+||++.++.+++.|..||.+..
T Consensus 173 lar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~ 241 (322)
T KOG1164|consen 173 LARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALE 241 (322)
T ss_pred CCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCcccc
Confidence 998 311 1 1 123559999999999999999999999999999999999999997654
No 408
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.91 E-value=3.2e-24 Score=210.00 Aligned_cols=168 Identities=28% Similarity=0.332 Sum_probs=124.0
Q ss_pred cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCcccccCCccc
Q 004954 500 ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCL 579 (722)
Q Consensus 500 gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~~~~~~~ 579 (722)
|+|.+++..... .+++..++.|+.||+.||.|||+.+ ||+|||++. ++.+++ ||++.......
T Consensus 1 GsL~~~l~~~~~-----~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~--~~~~~~--fG~~~~~~~~~-- 63 (176)
T smart00750 1 VSLADILEVRGR-----PLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTW--DGLLKL--DGSVAFKTPEQ-- 63 (176)
T ss_pred CcHHHHHHHhCC-----CCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcC--ccceee--ccceEeecccc--
Confidence 467777764322 3899999999999999999999999 999999985 778888 99987665433
Q ss_pred cccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChH-HHHHHHHHhhcCCCcHHHHhhhhhhhhhhcccc
Q 004954 580 YVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAV-VMILARIIGMLGPIDLEMLMQGQEIYKYFTKEY 658 (722)
Q Consensus 580 ~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~-~e~l~~i~~~lg~~~~~~~~~~~~~~~~~~~~~ 658 (722)
..+|+.|+|||++.+..++.++|||||||++|+|++|+.||..... ...+..+.....+...
T Consensus 64 ~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~----------------- 126 (176)
T smart00750 64 SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDP----------------- 126 (176)
T ss_pred CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCc-----------------
Confidence 2689999999999999999999999999999999999999965432 2222222211100000
Q ss_pred cchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCC
Q 004954 659 DLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQ 719 (722)
Q Consensus 659 ~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~ 719 (722)
...+...... ....+.+||++||..||.+|||+.|+++|+|+.
T Consensus 127 -------------~~~~~~~~~~-----~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~ 169 (176)
T smart00750 127 -------------RDRSNLESVS-----AARSFADFMRVCASRLPQRREAANHYLAHCRAL 169 (176)
T ss_pred -------------cccccHHHHH-----hhhhHHHHHHHHHhcccccccCHHHHHHHHHHH
Confidence 0000000000 002588999999999999999999999999874
No 409
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.88 E-value=1.3e-23 Score=242.95 Aligned_cols=263 Identities=22% Similarity=0.275 Sum_probs=188.0
Q ss_pred CcE-EEEEEeccCCCCceEEEEECCCCcEEEEEEeecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCe
Q 004954 414 GRY-YVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 490 (722)
Q Consensus 414 ~rY-~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~--~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~ 490 (722)
..| .-..++|.|++|.|+.+........++.|..... ........ ...+..++-......|+|++..+..+.....
T Consensus 317 ~~y~~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~-~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~ 395 (601)
T KOG0590|consen 317 EKYGKPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKY-NYNITSEFCIGSSLSHPNIIETLDIVQEIDG 395 (601)
T ss_pred cccCCccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHH-hhhhhhheeecccccCCchhhhHHHHhhccc
Confidence 345 3456799999999998887766666666654311 11111111 1125555555566788999888777776666
Q ss_pred EEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCc
Q 004954 491 LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (722)
Q Consensus 491 l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 570 (722)
..-+|||+++.|..++.... .++..++..++.|++.|++|||+.||.|||||++|+++.. .+.+||+|||.+
T Consensus 396 ~~~~mE~~~~Dlf~~~~~~~------~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~--~g~lki~Dfg~~ 467 (601)
T KOG0590|consen 396 ILQSMEYCPYDLFSLVMSNG------KLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTE--NGILKIIDFGAA 467 (601)
T ss_pred chhhhhcccHHHHHHHhccc------ccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEec--CCceEEeecCcc
Confidence 55669999987777776441 2788899999999999999999999999999999999996 779999999987
Q ss_pred ccccC-------CccccccCCcccCchhhcCCCCCc-hhhHHHHHHHHHHHHhCCCCCCCChHHHHHH-HHHhhcCCCcH
Q 004954 571 CFQTD-------NLCLYVQSRSYRAPEVIIGLPYDQ-KIDLWSLGCILAELWTGEVLFPNDAVVMILA-RIIGMLGPIDL 641 (722)
Q Consensus 571 ~~~~~-------~~~~~~gt~~y~APE~l~~~~~s~-ksDIWSLGviL~elltG~~PF~~~~~~e~l~-~i~~~lg~~~~ 641 (722)
....- .....+|+..|+|||++.+..|.. .+||||.|+++..|.+|+.||.-....+... .+.
T Consensus 468 ~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~-------- 539 (601)
T KOG0590|consen 468 SVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNN-------- 539 (601)
T ss_pred eeeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhc--------
Confidence 54321 123468899999999999999884 7899999999999999999996543222110 000
Q ss_pred HHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCCCCCC
Q 004954 642 EMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPWLQHP 721 (722)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPwf~~~ 721 (722)
. ..+...... ........+...+.+|.+||++||.+|.|+++|++.+||+..
T Consensus 540 ---------------~---------~~~~~~~~~----~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i 591 (601)
T KOG0590|consen 540 ---------------Y---------SDQRNIFEG----PNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRSI 591 (601)
T ss_pred ---------------c---------ccccccccC----hHHHHHhchhhHHHHHHHHccCChhheecHHHHhhChHhhhc
Confidence 0 000000000 011111223557799999999999999999999999999864
No 410
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.87 E-value=1.1e-20 Score=196.28 Aligned_cols=257 Identities=32% Similarity=0.489 Sum_probs=193.4
Q ss_pred EEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchh----hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 004954 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD----FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (722)
Q Consensus 416 Y~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~----~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (722)
|.+.+.||.|+|+.||++.+. ..+++|.+..... ....+.+|..++..+.+. ++|+++++.+......
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~-----~~i~~~~~~~~~~~~~ 73 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHP-----PNIVKLYDFFQDEGSL 73 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCC-----cceeeEEEEEecCCEE
Confidence 788999999999999999986 7889999875432 345677888888877643 2799999999877888
Q ss_pred EEEEEccccc-hHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCC-eEEEEecCC
Q 004954 492 FIVCELLRAN-LYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRC-EIKIIDLGS 569 (722)
Q Consensus 492 ~iVmEy~~gs-Ll~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~-~vkL~DFGl 569 (722)
+++++++.+. +.+++...... ..+.......++.|++.+|.|+|+.+++|||+||+||+++. .. .++++|||.
T Consensus 74 ~~~~~~~~~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~--~~~~~~l~dfg~ 148 (384)
T COG0515 74 YLVMEYVDGGSLEDLLKKIGRK---GPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDR--DGRVVKLIDFGL 148 (384)
T ss_pred EEEEecCCCCcHHHHHHhcccc---cCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecC--CCCeEEEeccCc
Confidence 9999999864 44333322211 24889999999999999999999999999999999999996 44 799999999
Q ss_pred cccccCC---------ccccccCCcccCchhhcC---CCCCchhhHHHHHHHHHHHHhCCCCCCCChH----HHHHHHHH
Q 004954 570 SCFQTDN---------LCLYVQSRSYRAPEVIIG---LPYDQKIDLWSLGCILAELWTGEVLFPNDAV----VMILARII 633 (722)
Q Consensus 570 s~~~~~~---------~~~~~gt~~y~APE~l~~---~~~s~ksDIWSLGviL~elltG~~PF~~~~~----~e~l~~i~ 633 (722)
+...... .....++..|++||.+.+ ..++...|+||+|++++++++|..||..... ......+.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 228 (384)
T COG0515 149 AKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIIL 228 (384)
T ss_pred ceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHH
Confidence 8754432 245688999999999988 5788999999999999999999999876653 23332222
Q ss_pred hhcCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHH
Q 004954 634 GMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREAL 713 (722)
Q Consensus 634 ~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL 713 (722)
....+ ........... ......+.+++.+++..+|..|.++.+..
T Consensus 229 ~~~~~------------------------------~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 273 (384)
T COG0515 229 ELPTP------------------------------SLASPLSPSNP-----ELISKAASDLLKKLLAKDPKNRLSSSSDL 273 (384)
T ss_pred hcCCc------------------------------ccccccCcccc-----chhhHHHHHHHHHHHhcCchhcCCHHHHh
Confidence 11111 00000000000 11124578999999999999999999998
Q ss_pred hCCCCCC
Q 004954 714 DHPWLQH 720 (722)
Q Consensus 714 ~HPwf~~ 720 (722)
.++|...
T Consensus 274 ~~~~~~~ 280 (384)
T COG0515 274 SHDLLAH 280 (384)
T ss_pred hchHhhC
Confidence 8876543
No 411
>cd08677 C2A_Synaptotagmin-13 C2 domain. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 13, a member of class 6 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmins 8 and 12, does not have any consensus Ca2+ binding sites. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domain
Probab=99.86 E-value=2.7e-22 Score=183.33 Aligned_cols=93 Identities=14% Similarity=0.051 Sum_probs=83.5
Q ss_pred ccceeEEEEeec-CCccccCCCCCCcceEEEecCCCCCcccceeeecccCCCcceeeeeecccccccCcc-ccccccccc
Q 004954 264 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPAEI 341 (722)
Q Consensus 264 s~~~l~v~l~e~-~L~~~d~~g~sDpyvk~~l~~d~~~~~k~kt~~~k~tlnP~~nE~f~f~~~v~~~~~-~~~L~~~V~ 341 (722)
+.+.|+|+|++| ||+ + .|.+|||||++|+|+.+ ++|+||+++|+|+||+|||+|.|. ++.+++ +++|.++||
T Consensus 12 ~~~~L~V~vikA~~L~-~--~g~sDPYVKv~L~~~~k-~~k~kT~v~rktlnPvfnE~f~F~--v~~~~l~~~tL~~~V~ 85 (118)
T cd08677 12 QKAELHVNILEAENIS-V--DAGCECYISGCVSVSEG-QKEAQTALKKLALHTQWEEELVFP--LPEEESLDGTLTLTLR 85 (118)
T ss_pred cCCEEEEEEEEecCCC-C--CCCCCeEEEEEEcCCcC-ccEEEcceecCCCCCccccEEEEe--CCHHHhCCcEEEEEEE
Confidence 568999999999 999 3 47799999999998766 357799999999999999999999 998888 666999999
Q ss_pred ccCCCCCCccccccccCcccc
Q 004954 342 DNSDTRDGEVNGALHEGKADA 362 (722)
Q Consensus 342 D~D~~~~~d~iG~v~~~~~~~ 362 (722)
|+|++++|++||++.++..+.
T Consensus 86 d~Drfs~~d~IG~v~l~l~~~ 106 (118)
T cd08677 86 CCDRFSRHSTLGELRLKLADV 106 (118)
T ss_pred eCCCCCCCceEEEEEEccccc
Confidence 999999999999999988664
No 412
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.85 E-value=5.4e-21 Score=208.59 Aligned_cols=166 Identities=20% Similarity=0.180 Sum_probs=126.7
Q ss_pred ceeeCceecCcEEEEEEeccCCCCceEEEEECC-CCcEEEEEEeecc------hhhhHhHHHHHHHHHHhcccCCCCCCc
Q 004954 405 PIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLH-TGVDVCLKIIKND------KDFFDQSLDEIKLLKLVNKNDPADEHH 477 (722)
Q Consensus 405 pi~~~~~l~~rY~i~~~LG~G~fG~Vy~a~d~~-tg~~vAvKil~~~------~~~~~~~~~E~~il~~L~~~~~~~hpn 477 (722)
|-.....+.++|.+.+.||+|+||+||+|++.. +++.+|||++... ......+.+|+++|+.++ |+|
T Consensus 9 ~~~~~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~------h~~ 82 (365)
T PRK09188 9 PGDQIPALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVR------GIG 82 (365)
T ss_pred cccccccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhcc------CCC
Confidence 334456778999999999999999999999876 6788899986532 223456789999999996 456
Q ss_pred ee-EEEEEEEecCeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccC-CCCceEEc
Q 004954 478 IL-RLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDL-KPENILIK 555 (722)
Q Consensus 478 Iv-~l~~~f~~~~~l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDL-Kp~NILl~ 555 (722)
++ ++++. +..++||||+.|..+.... . .. ...++.|+++||.|||+.||+|||| ||+|||++
T Consensus 83 iv~~l~~~----~~~~LVmE~~~G~~L~~~~---~------~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~ 146 (365)
T PRK09188 83 VVPQLLAT----GKDGLVRGWTEGVPLHLAR---P------HG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMG 146 (365)
T ss_pred CCcEEEEc----CCcEEEEEccCCCCHHHhC---c------cc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEc
Confidence 66 45542 5689999999876554221 0 11 1467889999999999999999999 99999997
Q ss_pred ccCCCeEEEEecCCcccccCCc-----------cccccCCcccCchhhcC
Q 004954 556 SYQRCEIKIIDLGSSCFQTDNL-----------CLYVQSRSYRAPEVIIG 594 (722)
Q Consensus 556 ~~~~~~vkL~DFGls~~~~~~~-----------~~~~gt~~y~APE~l~~ 594 (722)
. ++.+||+|||+++...... +...+++.|+|||.+..
T Consensus 147 ~--~~~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~ 194 (365)
T PRK09188 147 P--DGEAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTP 194 (365)
T ss_pred C--CCCEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCCh
Confidence 5 6789999999987544332 23466788999999853
No 413
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.83 E-value=7.6e-20 Score=192.17 Aligned_cols=206 Identities=22% Similarity=0.328 Sum_probs=131.7
Q ss_pred EEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchh----hhHhHHHHHHHHHHhccc-CC---CCCCceeEEEEEEEe
Q 004954 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD----FFDQSLDEIKLLKLVNKN-DP---ADEHHILRLYDYFYH 487 (722)
Q Consensus 416 Y~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~----~~~~~~~E~~il~~L~~~-~~---~~hpnIv~l~~~f~~ 487 (722)
....+.||.|+++.||.++|..||+.+|+|++..... ..+++.+|.-....+... ++ ..|-.++..++....
T Consensus 14 l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i 93 (288)
T PF14531_consen 14 LVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRI 93 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEE
T ss_pred EEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEE
Confidence 4566789999999999999999999999999864322 223333333222221110 00 001123333333221
Q ss_pred ---------c--------CeEEEEEEccccchHHHHhhhhccCC-CcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCC
Q 004954 488 ---------L--------EHLFIVCELLRANLYEFQKFNQESGG-EAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKP 549 (722)
Q Consensus 488 ---------~--------~~l~iVmEy~~gsLl~~l~~~~~~~~-~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp 549 (722)
. -..+++|+-+.++|.+++........ ...+.......+..|+++.+++||..|++|+||+|
T Consensus 94 ~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi~~ 173 (288)
T PF14531_consen 94 PGKPPFFERGPGQSIYWVLNRFLLMPRAQGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDIKP 173 (288)
T ss_dssp TTS-SEEEECETTEEEEEESEEEEEE--SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-SG
T ss_pred cCCCcceecCCCCccceeehhhhccchhhhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEecccce
Confidence 1 13478899999998888764332221 22244444566779999999999999999999999
Q ss_pred CceEEcccCCCeEEEEecCCcccccCCccccccCCcccCchhhcC--------CCCCchhhHHHHHHHHHHHHhCCCCCC
Q 004954 550 ENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSRSYRAPEVIIG--------LPYDQKIDLWSLGCILAELWTGEVLFP 621 (722)
Q Consensus 550 ~NILl~~~~~~~vkL~DFGls~~~~~~~~~~~gt~~y~APE~l~~--------~~~s~ksDIWSLGviL~elltG~~PF~ 621 (722)
+|++++. +|.++|+||+.....+........+..|.|||.... ..++.+.|.|+||+++|.|++|+.||.
T Consensus 174 ~nfll~~--~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~ 251 (288)
T PF14531_consen 174 ENFLLDQ--DGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFG 251 (288)
T ss_dssp GGEEE-T--TS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STC
T ss_pred eeEEEcC--CCCEEEcChHHHeecCceeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCC
Confidence 9999996 899999999987666554433455678999998743 247889999999999999999999996
Q ss_pred CC
Q 004954 622 ND 623 (722)
Q Consensus 622 ~~ 623 (722)
..
T Consensus 252 ~~ 253 (288)
T PF14531_consen 252 LS 253 (288)
T ss_dssp CC
T ss_pred CC
Confidence 53
No 414
>cd08692 C2B_Tac2-N C2 domain second repeat found in Tac2-N (Tandem C2 protein in Nucleus). Tac2-N contains two C2 domains and a short C-terminus including a WHXL motif, which are key in stabilizing transport vesicles to the plasma membrane by binding to a plasma membrane. However unlike the usual carboxyl-terminal-type (C-type) tandem C2 proteins, it lacks a transmembrane domain, a Slp-homology domain, and a Munc13-1-interacting domain. Homology search analysis indicate that no known protein motifs are located in its N-terminus, making Tac2-N a novel class of Ca2+-independent, C-type tandem C2 proteins. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polypho
Probab=99.83 E-value=2.2e-21 Score=181.56 Aligned_cols=107 Identities=12% Similarity=0.021 Sum_probs=96.9
Q ss_pred ccceeEEEEeec-CCccccCCCCCCcceEEEecCCCCCcccceeeecccCC-CcceeeeeecccccccCccccccccccc
Q 004954 264 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGS-SIDWIEGFKGSSDLHFKGAEKDLMPAEI 341 (722)
Q Consensus 264 s~~~l~v~l~e~-~L~~~d~~g~sDpyvk~~l~~d~~~~~k~kt~~~k~tl-nP~~nE~f~f~~~v~~~~~~~~L~~~V~ 341 (722)
++++|+|+|++| ||++|+..+..|||||+.|++++++.+|+||+++|+|+ ||+|||+|.|+ ++.+..+.+|.++||
T Consensus 12 ~~~rLtV~VikarnL~~~~~~~~~dpYVKV~L~~~~k~~~KkKT~v~k~t~~~P~fNEsF~Fd--v~~~~~~v~l~v~v~ 89 (135)
T cd08692 12 VNSRIQLQILEAQNLPSSSTPLTLSFFVKVGMFSTGGLLYKKKTRLVKSSNGQVKWGETMIFP--VTQQEHGIQFLIKLY 89 (135)
T ss_pred cCCeEEEEEEEccCCCcccCCCCCCcEEEEEEEECCCcceeecCccEECCCCCceecceEEEe--CCchhheeEEEEEEE
Confidence 678899999999 99999888888999999999999999999999999996 59999999999 887766766999999
Q ss_pred ccCCCCCCccccccccCccccccccCCCcch
Q 004954 342 DNSDTRDGEVNGALHEGKADAEEHGVATPDL 372 (722)
Q Consensus 342 D~D~~~~~d~iG~v~~~~~~~~~e~~~~~~~ 372 (722)
|+|++++|++||.+.+|..+..+++...|.+
T Consensus 90 d~~~~~~n~~IG~v~lG~~~~~~~~~~hW~~ 120 (135)
T cd08692 90 SRSSVRRKHFLGQVWISSDSSSSEAVEQWKD 120 (135)
T ss_pred eCCCCcCCceEEEEEECCccCCchhhhhHHH
Confidence 9999999999999999988777777777666
No 415
>cd08407 C2B_Synaptotagmin-13 C2 domain second repeat present in Synaptotagmin 13. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 13, a member of class 6 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmins 8 and 12, does not have any consensus Ca2+ binding sites. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recy
Probab=99.82 E-value=4.7e-21 Score=181.31 Aligned_cols=106 Identities=12% Similarity=-0.022 Sum_probs=92.6
Q ss_pred ccceeEEEEeec-CCccccCC--CCCCcceEEEecCCCCCcccceeeecccCCCcceeeeeecccccccCcc-ccccccc
Q 004954 264 NNDYGYLSSKEA-DLIDLQHN--VVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPA 339 (722)
Q Consensus 264 s~~~l~v~l~e~-~L~~~d~~--g~sDpyvk~~l~~d~~~~~k~kt~~~k~tlnP~~nE~f~f~~~v~~~~~-~~~L~~~ 339 (722)
++++|+|+|++| ||.++|.+ +.+|||||++|++++++.+|+||+++++++||+|||+|.|. ++.+.+ +.+|.++
T Consensus 13 ~~~~L~V~V~karnL~~~d~~~~~~~DpYVKv~l~~~~~k~~kkkT~v~k~t~nPvfNE~f~F~--v~~~~L~~~~L~~~ 90 (138)
T cd08407 13 AANRLLVVVIKAKNLHSDQLKLLLGIDVSVKVTLKHQNAKLKKKQTKRAKHKINPVWNEMIMFE--LPSELLAASSVELE 90 (138)
T ss_pred CCCeEEEEEEEecCCCccccCCCCCCCeEEEEEEEcCCcccceeccceeeCCCCCccccEEEEE--CCHHHhCccEEEEE
Confidence 567899999999 99999954 55899999999999888899999999999999999999999 998888 5569999
Q ss_pred ccccCCCCCCccccccccCccccccccCCCcch
Q 004954 340 EIDNSDTRDGEVNGALHEGKADAEEHGVATPDL 372 (722)
Q Consensus 340 V~D~D~~~~~d~iG~v~~~~~~~~~e~~~~~~~ 372 (722)
|||+|++++++++|++.++... .++....|.+
T Consensus 91 V~d~d~~~~~d~iG~v~lg~~~-~g~~~~hW~~ 122 (138)
T cd08407 91 VLNQDSPGQSLPLGRCSLGLHT-SGTERQHWEE 122 (138)
T ss_pred EEeCCCCcCcceeceEEecCcC-CCcHHHHHHH
Confidence 9999999999999999999864 4444445443
No 416
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.81 E-value=4.4e-21 Score=213.40 Aligned_cols=236 Identities=27% Similarity=0.350 Sum_probs=183.8
Q ss_pred EeccCCCCceEEEEE---CCCCcEEEEEEeecchhh---hHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEE
Q 004954 421 YLGSAAFSKVFQAQD---LHTGVDVCLKIIKNDKDF---FDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIV 494 (722)
Q Consensus 421 ~LG~G~fG~Vy~a~d---~~tg~~vAvKil~~~~~~---~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~iV 494 (722)
++|.|.||.|+++.- ...|+-+|+|++++.... ......|..++..++ .||.++++...|+....++++
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~-----~~~f~v~lhyafqt~~kl~l~ 75 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVH-----NTPFLVKLHYAFQTDGKLYLI 75 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhcc-----CCCceeeeeeeeccccchhHh
Confidence 379999999998852 345677899988753211 113445666666665 368999999999999999999
Q ss_pred EEccccc-hHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCcccc
Q 004954 495 CELLRAN-LYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQ 573 (722)
Q Consensus 495 mEy~~gs-Ll~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~~ 573 (722)
+++..|+ +..-+.. ...+.+.....+...++-++.++|+.+|+|||+|++||+++. +|.+++.|||+++..
T Consensus 76 ld~~rgg~lft~l~~------~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~--~Ghi~~tdfglske~ 147 (612)
T KOG0603|consen 76 LDFLRGGDLFTRLSK------EVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLL--EGHIKLTDFGLSKEA 147 (612)
T ss_pred hhhcccchhhhcccc------CCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecc--cCccccCCchhhhHh
Confidence 9999874 3332221 223777788888889999999999999999999999999996 899999999999765
Q ss_pred cCCccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhhhh
Q 004954 574 TDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKY 653 (722)
Q Consensus 574 ~~~~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~~~~~~ 653 (722)
-..... +||..|||||++. ....++|.||+|+++++|+||..||.. ++..+|.+.--.+|.+
T Consensus 148 v~~~~~-cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il~~~~~~p~~----------- 209 (612)
T KOG0603|consen 148 VKEKIA-CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRILKAELEMPRE----------- 209 (612)
T ss_pred Hhhhhc-ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch----HHHHHHhhhccCCchh-----------
Confidence 444333 8999999999998 567899999999999999999999987 4555554322222222
Q ss_pred hcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcC-----HHHHHhCCCCCC
Q 004954 654 FTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPT-----AREALDHPWLQH 720 (722)
Q Consensus 654 ~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpT-----a~ElL~HPwf~~ 720 (722)
...++.+++..|+..+|.+|.- +.|+++|+||+.
T Consensus 210 ---------------------------------l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~ 248 (612)
T KOG0603|consen 210 ---------------------------------LSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQHEFFQS 248 (612)
T ss_pred ---------------------------------hhHHHHHHHHHHHhhCHHHHhccCcchhHHHhccchhee
Confidence 2355779999999999999975 589999999975
No 417
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.81 E-value=3.6e-20 Score=214.72 Aligned_cols=219 Identities=29% Similarity=0.383 Sum_probs=162.5
Q ss_pred ecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 004954 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (722)
Q Consensus 412 l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (722)
...+|..++.|-.|+||.||+++|+.+.+++|+|+=+++- |++ ||+.+- +..
T Consensus 81 ~e~df~~IklisngAygavylvrh~~trqrfa~kiNkq~l-----------ilR-----------nilt~a------~np 132 (1205)
T KOG0606|consen 81 SESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINKQNL-----------ILR-----------NILTFA------GNP 132 (1205)
T ss_pred CccccceeEeeccCCCCceeeeeccccccchhhcccccch-----------hhh-----------cccccc------CCc
Confidence 3467999999999999999999999999999996533221 111 121111 112
Q ss_pred EEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCcc
Q 004954 492 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 571 (722)
Q Consensus 492 ~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~ 571 (722)
+.| |+-..+++.... ++... +.+++|||+.||+|||+||+|.+|+. -|.+|++|||+++
T Consensus 133 fvv-----gDc~tllk~~g~------lPvdm--------vla~Eylh~ygivhrdlkpdnllIT~--mGhiKlTDfgLsk 191 (1205)
T KOG0606|consen 133 FVV-----GDCATLLKNIGP------LPVDM--------VLAVEYLHSYGIVHRDLKPDNLLITS--MGHIKLTDFGLSK 191 (1205)
T ss_pred cee-----chhhhhcccCCC------Ccchh--------hHHhHhhccCCeecCCCCCCcceeee--cccccccchhhhh
Confidence 222 333333332111 33222 66999999999999999999999997 8899999999875
Q ss_pred cccCC------------------ccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHH
Q 004954 572 FQTDN------------------LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARII 633 (722)
Q Consensus 572 ~~~~~------------------~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~ 633 (722)
..... ....+|||.|+|||++..+.|+..+|+|++|+|+|+.+-|+.||-++.+++++..++
T Consensus 192 ~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~vi 271 (1205)
T KOG0606|consen 192 KGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVI 271 (1205)
T ss_pred hhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhh
Confidence 31111 123589999999999999999999999999999999999999999999999998887
Q ss_pred hhcCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCc---CHH
Q 004954 634 GMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRP---TAR 710 (722)
Q Consensus 634 ~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRp---Ta~ 710 (722)
......|.+ -....++.+++|.++|+.+|..|. .+-
T Consensus 272 sd~i~wpE~-----------------------------------------dea~p~Ea~dli~~LL~qnp~~Rlgt~ga~ 310 (1205)
T KOG0606|consen 272 SDDIEWPEE-----------------------------------------DEALPPEAQDLIEQLLRQNPLCRLGTGGAL 310 (1205)
T ss_pred hhhcccccc-----------------------------------------CcCCCHHHHHHHHHHHHhChHhhcccchhh
Confidence 432221111 011246688999999999999995 577
Q ss_pred HHHhCCCCCC
Q 004954 711 EALDHPWLQH 720 (722)
Q Consensus 711 ElL~HPwf~~ 720 (722)
+|-+|+||+.
T Consensus 311 evk~h~ff~~ 320 (1205)
T KOG0606|consen 311 EVKQHGFFQL 320 (1205)
T ss_pred hhhhccceee
Confidence 8889999974
No 418
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.81 E-value=6.8e-20 Score=187.22 Aligned_cols=177 Identities=15% Similarity=0.197 Sum_probs=131.4
Q ss_pred cceeeCceecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchh----hhHh------HHHHHHHHHHhcccCCC
Q 004954 404 LPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD----FFDQ------SLDEIKLLKLVNKNDPA 473 (722)
Q Consensus 404 ~pi~~~~~l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~----~~~~------~~~E~~il~~L~~~~~~ 473 (722)
+..+..+.+.++|+++++||.|+||.||++.+ ++..+|||++..... .... +.+|++.+.++.
T Consensus 21 ~~~~~~~~l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~----- 93 (232)
T PRK10359 21 YKEIFDDFLSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVR----- 93 (232)
T ss_pred HHHHHHHHhhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHH-----
Confidence 45567788899999999999999999999765 477899999974321 1112 467777888886
Q ss_pred CCCceeEEEEEEEec--------CeEEEEEEccccc-hHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCcc
Q 004954 474 DEHHILRLYDYFYHL--------EHLFIVCELLRAN-LYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIH 544 (722)
Q Consensus 474 ~hpnIv~l~~~f~~~--------~~l~iVmEy~~gs-Ll~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvH 544 (722)
|++|..+.+++... ...+|||||++|. |.+... +++ ....+++.+|..||+.|++|
T Consensus 94 -~~GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~----------~~~----~~~~~i~~~l~~lH~~gi~H 158 (232)
T PRK10359 94 -SEGLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMPE----------ISE----DVKAKIKASIESLHQHGMVS 158 (232)
T ss_pred -HCCCCcceEeeeecccccccccCCeEEEEEEECCccHHHhhh----------ccH----HHHHHHHHHHHHHHHcCCcc
Confidence 45788777776643 3589999999984 544311 332 24569999999999999999
Q ss_pred ccCCCCceEEcccCCCeEEEEecCCcccccCCccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHH
Q 004954 545 CDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELW 614 (722)
Q Consensus 545 rDLKp~NILl~~~~~~~vkL~DFGls~~~~~~~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ell 614 (722)
||+||+||++++ ++ ++|+|||........... ...++...+..++|+|+||+++..+.
T Consensus 159 ~Dikp~Nili~~--~g-i~liDfg~~~~~~e~~a~---------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 159 GDPHKGNFIVSK--NG-LRIIDLSGKRCTAQRKAK---------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred CCCChHHEEEeC--CC-EEEEECCCcccccchhhH---------HHHHHHhHhcccccccceeEeehHHH
Confidence 999999999986 55 999999987554322111 11344555778999999999987665
No 419
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.81 E-value=2.4e-20 Score=216.01 Aligned_cols=244 Identities=26% Similarity=0.402 Sum_probs=172.9
Q ss_pred cEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchh--hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEE
Q 004954 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD--FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF 492 (722)
Q Consensus 415 rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~--~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~ 492 (722)
.|...+.||++.|=+|.+|++ ..|. |+||++.+... ..+.+.++++-++.. ...+||.+.+.-+-......|
T Consensus 24 e~~~~~~LGstRFlKv~r~k~-~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~----l~~~pn~lPfqk~~~t~kAAy 97 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKD-REGL-VVVKVFVKQDPTISLRPFKQRLEEIKFA----LMKAPNCLPFQKVLVTDKAAY 97 (1431)
T ss_pred ceeeecccCchhhhhhhhccC-CCce-EEEEEEeccCCCCCchHHHHHHHHHHHH----hhcCCcccchHHHHHhhHHHH
Confidence 678888999999999999986 4555 99999865432 223333333333311 124689998887777777889
Q ss_pred EEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCccc
Q 004954 493 IVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF 572 (722)
Q Consensus 493 iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~ 572 (722)
||-+|+..+|++.+..+. .+.+-+.+.|+.||+.||.-+|..||+|||||.+||||++ -.-+.|+||..-+.
T Consensus 98 lvRqyvkhnLyDRlSTRP------FL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTS--WNW~~LtDFAsFKP 169 (1431)
T KOG1240|consen 98 LVRQYVKHNLYDRLSTRP------FLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITS--WNWLYLTDFASFKP 169 (1431)
T ss_pred HHHHHHhhhhhhhhccch------HHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEee--echhhhhcccccCC
Confidence 999999999998776543 3778888999999999999999999999999999999997 55688999985432
Q ss_pred ---ccCCcc---ccccC----CcccCchhhcCC----------C-CCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHH
Q 004954 573 ---QTDNLC---LYVQS----RSYRAPEVIIGL----------P-YDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILA 630 (722)
Q Consensus 573 ---~~~~~~---~~~gt----~~y~APE~l~~~----------~-~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~ 630 (722)
..+++. .+..| ..|.|||.+... + .+.+.||||+||++.||++ |++||.-.+...+-.
T Consensus 170 tYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~aYr~ 249 (1431)
T KOG1240|consen 170 TYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLAYRS 249 (1431)
T ss_pred ccCCCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHhHhc
Confidence 122221 12222 349999998531 1 5678999999999999988 899995322111100
Q ss_pred HHHhhcCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHH
Q 004954 631 RIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAR 710 (722)
Q Consensus 631 ~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ 710 (722)
. +..+. .++...| .+..+++||..|++.||++|.+|+
T Consensus 250 ~-----~~~~~--------------------------e~~Le~I------------ed~~~Rnlil~Mi~rdPs~RlSAe 286 (1431)
T KOG1240|consen 250 G-----NADDP--------------------------EQLLEKI------------EDVSLRNLILSMIQRDPSKRLSAE 286 (1431)
T ss_pred c-----CccCH--------------------------HHHHHhC------------cCccHHHHHHHHHccCchhccCHH
Confidence 0 00000 0111111 234578999999999999999999
Q ss_pred HHHhC
Q 004954 711 EALDH 715 (722)
Q Consensus 711 ElL~H 715 (722)
+.|+-
T Consensus 287 dyL~~ 291 (1431)
T KOG1240|consen 287 DYLQK 291 (1431)
T ss_pred HHHHh
Confidence 99974
No 420
>cd08406 C2B_Synaptotagmin-12 C2 domain second repeat present in Synaptotagmin 12. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 12, a member of class 6 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmins 8 and 13, do not have any consensus Ca2+ binding sites. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycl
Probab=99.80 E-value=2.1e-20 Score=176.81 Aligned_cols=104 Identities=12% Similarity=0.004 Sum_probs=92.3
Q ss_pred ccceeEEEEeec-CCccccCCCCCCcceEEEecCCCCCcccceeeecccCCCcceeeeeecccccccCcc-ccccccccc
Q 004954 264 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPAEI 341 (722)
Q Consensus 264 s~~~l~v~l~e~-~L~~~d~~g~sDpyvk~~l~~d~~~~~k~kt~~~k~tlnP~~nE~f~f~~~v~~~~~-~~~L~~~V~ 341 (722)
..++|+|.|++| ||+++|.+|.+|||||++|+|++++.+|+||+++|+|+||+|||+|.|. ++.+.+ +.+|.++||
T Consensus 13 ~~~~L~V~Vi~A~nL~~~~~~g~~DpyVkv~l~~~~~~~~k~kT~v~k~t~nP~~nE~f~F~--v~~~~l~~~~l~~~V~ 90 (136)
T cd08406 13 TAERLTVVVVKARNLVWDNGKTTADPFVKVYLLQDGRKISKKKTSVKRDDTNPIFNEAMIFS--VPAIVLQDLSLRVTVA 90 (136)
T ss_pred CCCEEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCccccccCCccccCCCCCeeceeEEEE--CCHHHhCCcEEEEEEE
Confidence 457899999999 9999999999999999999999888889999999999999999999999 888777 566999999
Q ss_pred ccCCCCCCccccccccCccccccccCCCc
Q 004954 342 DNSDTRDGEVNGALHEGKADAEEHGVATP 370 (722)
Q Consensus 342 D~D~~~~~d~iG~v~~~~~~~~~e~~~~~ 370 (722)
|+|++++++++|.+.++... .+++...|
T Consensus 91 ~~d~~~~~~~iG~v~lg~~~-~g~~~~hW 118 (136)
T cd08406 91 ESTEDGKTPNVGHVIIGPAA-SGMGLSHW 118 (136)
T ss_pred eCCCCCCCCeeEEEEECCCC-CChhHHHH
Confidence 99999999999999998764 33444443
No 421
>cd08680 C2_Kibra C2 domain found in Human protein Kibra. Kibra is thought to be a regulator of the Salvador (Sav)/Warts (Wts)/Hippo (Hpo) (SWH) signaling network, which limits tissue growth by inhibiting cell proliferation and promoting apoptosis. The core of the pathway consists of a MST and LATS family kinase cascade that ultimately phosphorylates and inactivates the YAP/Yorkie (Yki) transcription coactivator. The FERM domain proteins Merlin (Mer) and Expanded (Ex) are part of the upstream regulation controlling pathway mechanism. Kibra colocalizes and associates with Mer and Ex and is thought to transduce an extracellular signal via the SWH network. The apical scaffold machinery that contains Hpo, Wts, and Ex recruits Yki to the apical membrane facilitating its inhibitory phosphorlyation by Wts. Since Kibra associates with Ex and is apically located it is hypothesized that KIBRA is part of the scaffold, helps in the Hpo/Wts complex, and helps recruit Yki for inactivation that prom
Probab=99.79 E-value=7e-20 Score=170.43 Aligned_cols=98 Identities=14% Similarity=0.054 Sum_probs=89.6
Q ss_pred ccceeEEEEeec-CCccccCCCCCCcceEEEecCCCCCc-ccceeeecccCCCcceeeeeecccccccCcc-cccccccc
Q 004954 264 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTE-KSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPAE 340 (722)
Q Consensus 264 s~~~l~v~l~e~-~L~~~d~~g~sDpyvk~~l~~d~~~~-~k~kt~~~k~tlnP~~nE~f~f~~~v~~~~~-~~~L~~~V 340 (722)
..++|+|+|++| ||+++|.+|.+|||||++|+|++++. +++||+++++++||+|||+|.|. ++.+++ +++|.++|
T Consensus 12 ~~~~L~V~V~~arnL~~~~~~~~~dpyVKv~Llp~~~~~~~~~kT~v~~~t~nPvfnE~F~f~--v~~~~L~~~~L~~~V 89 (124)
T cd08680 12 GDSSLVISVEQLRNLSALSIPENSKVYVRVALLPCSSSTSCLFRTKALEDQDKPVFNEVFRVP--ISSTKLYQKTLQVDV 89 (124)
T ss_pred CCCEEEEEEeEecCCcccccCCCCCeEEEEEEccCCCCCCceEEcCccCCCCCCccccEEEEE--CCHHHhhcCEEEEEE
Confidence 457899999999 99999999999999999999998763 68999999999999999999999 888888 67799999
Q ss_pred cccCCCCCCccccccccCccccc
Q 004954 341 IDNSDTRDGEVNGALHEGKADAE 363 (722)
Q Consensus 341 ~D~D~~~~~d~iG~v~~~~~~~~ 363 (722)
||++++++++++|+++++..+.+
T Consensus 90 ~~~~~~~~~~~lG~~~i~L~~~~ 112 (124)
T cd08680 90 CSVGPDQQEECLGGAQISLADFE 112 (124)
T ss_pred EeCCCCCceeEEEEEEEEhhhcc
Confidence 99999999999999999876553
No 422
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.79 E-value=7e-20 Score=184.56 Aligned_cols=242 Identities=19% Similarity=0.254 Sum_probs=183.1
Q ss_pred CcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCe
Q 004954 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 490 (722)
Q Consensus 414 ~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~---~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~ 490 (722)
....++.+|.....|..|+|++. |..++.|+++... .....+..|.-.|+. ..||||+.+++.+....+
T Consensus 190 ~~lnl~tkl~e~hsgelwrgrwq--gndivakil~vr~~t~risrdfneefp~lri------fshpnilpvlgacnsppn 261 (448)
T KOG0195|consen 190 SSLNLITKLAESHSGELWRGRWQ--GNDIVAKILNVREVTARISRDFNEEFPALRI------FSHPNILPVLGACNSPPN 261 (448)
T ss_pred hhhhhhhhhccCCCccccccccc--CcchhhhhhhhhhcchhhcchhhhhCcceee------ecCCchhhhhhhccCCCC
Confidence 34556677999999999999974 4567778876432 222344444444444 458999999999999999
Q ss_pred EEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCC--CccccCCCCceEEcccCCCeEEEEec
Q 004954 491 LFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLG--IIHCDLKPENILIKSYQRCEIKIIDL 567 (722)
Q Consensus 491 l~iVmEy~~-gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~g--IvHrDLKp~NILl~~~~~~~vkL~DF 567 (722)
+.++..||+ |+|+.++... ........++.+++..|+.|++|||+.. |.---|....|+|+.+-+..+..+|-
T Consensus 262 lv~isq~mp~gslynvlhe~----t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~ 337 (448)
T KOG0195|consen 262 LVIISQYMPFGSLYNVLHEQ----TSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADT 337 (448)
T ss_pred ceEeeeeccchHHHHHHhcC----ccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccc
Confidence 999999998 7888887743 3345788899999999999999999985 55557889999999744445555554
Q ss_pred CCcccccCCccccccCCcccCchhhcCCCCC---chhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHH
Q 004954 568 GSSCFQTDNLCLYVQSRSYRAPEVIIGLPYD---QKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEML 644 (722)
Q Consensus 568 Gls~~~~~~~~~~~gt~~y~APE~l~~~~~s---~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~ 644 (722)
-++.+.. .....|.|++||.+..++.+ .+.|+|||++++||+.|.+.||...++.+.-.+|.
T Consensus 338 kfsfqe~----gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkia----------- 402 (448)
T KOG0195|consen 338 KFSFQEV----GRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIA----------- 402 (448)
T ss_pred eeeeecc----ccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhh-----------
Confidence 4443322 23458999999999887644 57999999999999999999999988877766653
Q ss_pred hhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHH
Q 004954 645 MQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREAL 713 (722)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL 713 (722)
.+.++..||+.. +..+..|+.-|+..||.+||..+.++
T Consensus 403 ----------------------leglrv~ippgi---------s~hm~klm~icmnedpgkrpkfdmiv 440 (448)
T KOG0195|consen 403 ----------------------LEGLRVHIPPGI---------SRHMNKLMNICMNEDPGKRPKFDMIV 440 (448)
T ss_pred ----------------------hccccccCCCCc---------cHHHHHHHHHHhcCCCCcCCCcceeh
Confidence 234455566543 35688999999999999999877654
No 423
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.78 E-value=6.2e-19 Score=176.50 Aligned_cols=139 Identities=17% Similarity=0.214 Sum_probs=103.3
Q ss_pred EEEeccCCCCceEEEEECCCCcEEEEEEeecchhh---------------------------hHhHHHHHHHHHHhcccC
Q 004954 419 TEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF---------------------------FDQSLDEIKLLKLVNKND 471 (722)
Q Consensus 419 ~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~~---------------------------~~~~~~E~~il~~L~~~~ 471 (722)
...||+|+||.||+|.+. +|+.||||+++..... ......|.+++..+.+..
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG 80 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 457999999999999986 8999999999754210 012234888999987542
Q ss_pred CCCCCceeEEEEEEEecCeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHH-HHCCCccccCCCC
Q 004954 472 PADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYL-HSLGIIHCDLKPE 550 (722)
Q Consensus 472 ~~~hpnIv~l~~~f~~~~~l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yL-Hs~gIvHrDLKp~ 550 (722)
. .+|+++. ... .+|||||++|+.+....... ..+++..+..++.|++.+|.+| |+.||+||||||+
T Consensus 81 v-~~p~~~~------~~~-~~iVmE~i~g~~l~~~~~~~-----~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~ 147 (190)
T cd05147 81 I-PCPEPIL------LKS-HVLVMEFIGDDGWAAPRLKD-----APLSESKARELYLQVIQIMRILYQDCRLVHADLSEY 147 (190)
T ss_pred C-CCCcEEE------ecC-CEEEEEEeCCCCCcchhhhc-----CCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHH
Confidence 1 2344321 122 37999999976433222111 2388899999999999999999 7999999999999
Q ss_pred ceEEcccCCCeEEEEecCCccccc
Q 004954 551 NILIKSYQRCEIKIIDLGSSCFQT 574 (722)
Q Consensus 551 NILl~~~~~~~vkL~DFGls~~~~ 574 (722)
|||++ ++.++|+|||++....
T Consensus 148 NIli~---~~~v~LiDFG~a~~~~ 168 (190)
T cd05147 148 NLLYH---DGKLYIIDVSQSVEHD 168 (190)
T ss_pred HEEEE---CCcEEEEEccccccCC
Confidence 99998 4679999999987543
No 424
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.76 E-value=1.8e-18 Score=204.55 Aligned_cols=202 Identities=20% Similarity=0.305 Sum_probs=163.2
Q ss_pred ceeeCceecCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEE
Q 004954 405 PIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDY 484 (722)
Q Consensus 405 pi~~~~~l~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~ 484 (722)
|.....+-+..|.|.+.||+|+||+||+|.+.. |+.||+|+-+....+ .+.--.+++.+|+- ..-+-|..+..+
T Consensus 689 ~~~~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~W--EfYI~~q~~~RLk~---~~~~~~~~~~~a 762 (974)
T KOG1166|consen 689 PNTEFEVGGEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPW--EFYICLQVMERLKP---QMLPSIMHISSA 762 (974)
T ss_pred ccceeeecceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCce--eeeehHHHHHhhch---hhhcchHHHHHH
Confidence 444445667889999999999999999999766 999999998776543 34444556666651 112457777777
Q ss_pred EEecCeEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcc-----cC
Q 004954 485 FYHLEHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKS-----YQ 558 (722)
Q Consensus 485 f~~~~~l~iVmEy~~-gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~-----~~ 558 (722)
+...+..++|+||.+ |+|++++. ....+++..+..++.||+..+..||..+|||+||||+|+||.. .+
T Consensus 763 ~~~~~~S~lv~ey~~~Gtlld~~N------~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~ 836 (974)
T KOG1166|consen 763 HVFQNASVLVSEYSPYGTLLDLIN------TNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSD 836 (974)
T ss_pred HccCCcceeeeeccccccHHHhhc------cCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCc
Confidence 778888999999998 78999887 2334889999999999999999999999999999999999964 23
Q ss_pred CCeEEEEecCCcccc---cC--CccccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHhCCC
Q 004954 559 RCEIKIIDLGSSCFQ---TD--NLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEV 618 (722)
Q Consensus 559 ~~~vkL~DFGls~~~---~~--~~~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~elltG~~ 618 (722)
...++|||||.+... .+ .....++|-.+-.+|+..|++|++++|.|.|+.+++-||.|+.
T Consensus 837 ~~~l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 837 SKGLYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred ccceEEEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 456999999988532 22 2344678889999999999999999999999999999999974
No 425
>cd04028 C2B_RIM1alpha C2 domain second repeat contained in Rab3-interacting molecule (RIM) proteins. RIMs are believed to organize specialized sites of the plasma membrane called active zones. They also play a role in controlling neurotransmitter release, plasticity processes, as well as memory and learning. RIM contains an N-terminal zinc finger domain, a PDZ domain, and two C-terminal C2 domains (C2A, C2B). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as
Probab=99.76 E-value=5.6e-19 Score=168.46 Aligned_cols=96 Identities=9% Similarity=-0.034 Sum_probs=86.5
Q ss_pred ccceeEEEEeec-CCcccc-CCCCCCcceEEEecCCCCCcccceeeecccCCCcceeeeeecccccccCccccccccccc
Q 004954 264 NNDYGYLSSKEA-DLIDLQ-HNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAEKDLMPAEI 341 (722)
Q Consensus 264 s~~~l~v~l~e~-~L~~~d-~~g~sDpyvk~~l~~d~~~~~k~kt~~~k~tlnP~~nE~f~f~~~v~~~~~~~~L~~~V~ 341 (722)
..+.|+|+|++| ||.++| .+|.+|||||++|+|++++..|+||+++|+|+||+|||+|.|. +. ..+++|.++||
T Consensus 27 ~~~~L~V~Vi~ArnL~~~~~~~g~sDPYVKv~Llp~~~~~~k~KT~v~kktlnPvfNE~F~f~--v~--l~~~~L~v~V~ 102 (146)
T cd04028 27 KKGQLEVEVIRARGLVQKPGSKVLPAPYVKVYLLEGKKCIAKKKTKIARKTLDPLYQQQLVFD--VS--PTGKTLQVIVW 102 (146)
T ss_pred CCCEEEEEEEEeeCCCcccCCCCCcCCeEEEEEECCCccccceeceecCCCCCCccCCeEEEE--Ec--CCCCEEEEEEE
Confidence 457899999999 999985 6889999999999999998889999999999999999999999 66 34677999999
Q ss_pred -ccCCCCCCccccccccCccccc
Q 004954 342 -DNSDTRDGEVNGALHEGKADAE 363 (722)
Q Consensus 342 -D~D~~~~~d~iG~v~~~~~~~~ 363 (722)
|++++++++++|++.+.....+
T Consensus 103 ~d~~~~~~~~~iG~~~i~L~~l~ 125 (146)
T cd04028 103 GDYGRMDKKVFMGVAQILLDDLD 125 (146)
T ss_pred eCCCCCCCCceEEEEEEEccccc
Confidence 7999999999999999877664
No 426
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.76 E-value=2.4e-18 Score=181.41 Aligned_cols=189 Identities=24% Similarity=0.342 Sum_probs=136.8
Q ss_pred CCCCceeEEEEEEEec---------------------------CeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHH
Q 004954 473 ADEHHILRLYDYFYHL---------------------------EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQV 525 (722)
Q Consensus 473 ~~hpnIv~l~~~f~~~---------------------------~~l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~ 525 (722)
..|||||++..+|.+. ..+|+||.....+|..++..+. .+......
T Consensus 273 a~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~tLr~yl~~~~-------~s~r~~~~ 345 (598)
T KOG4158|consen 273 AKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQTLREYLWTRH-------RSYRTGRV 345 (598)
T ss_pred CCCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchhhHHHHHhcCC-------CchHHHHH
Confidence 4799999999998642 2589999999999998887543 56677888
Q ss_pred HHHHHHHHHHHHHHCCCccccCCCCceEEcccCC--CeEEEEecCCccccc---------CCccccccCCcccCchhhcC
Q 004954 526 ITRQCLEALEYLHSLGIIHCDLKPENILIKSYQR--CEIKIIDLGSSCFQT---------DNLCLYVQSRSYRAPEVIIG 594 (722)
Q Consensus 526 i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~--~~vkL~DFGls~~~~---------~~~~~~~gt~~y~APE~l~~ 594 (722)
|+.|+++|+.|||++||.|||+|.+||||.-+++ ..+.|+|||.+--.. ......-|.-.-||||+...
T Consensus 346 ~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta 425 (598)
T KOG4158|consen 346 ILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATA 425 (598)
T ss_pred HHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhc
Confidence 9999999999999999999999999999865433 478999999752111 11112345566899999875
Q ss_pred CC------CCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcCCCcHHHHhhhhhhhhhhcccccchhhhhccc
Q 004954 595 LP------YDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETN 668 (722)
Q Consensus 595 ~~------~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (722)
.+ --.++|.|+.|.+.||++....||.......+ . ...|
T Consensus 426 ~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L-----------------~---~r~Y--------------- 470 (598)
T KOG4158|consen 426 VPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLL-----------------D---TRTY--------------- 470 (598)
T ss_pred CCCCceeeccchhhhhhhhhhHHHHhccCCcccccchhee-----------------c---hhhh---------------
Confidence 43 12479999999999999999999965211000 0 0000
Q ss_pred cccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHH
Q 004954 669 QLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAR 710 (722)
Q Consensus 669 ~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ 710 (722)
.+ ..++..+...++.+++|+..+|+.||+||+++.
T Consensus 471 -qe------~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp~ 505 (598)
T KOG4158|consen 471 -QE------SQLPALPSRVPPVARQLVFDLLKRDPSKRVSPN 505 (598)
T ss_pred -hh------hhCCCCcccCChHHHHHHHHHhcCCccccCCcc
Confidence 00 111112223457789999999999999999854
No 427
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.75 E-value=8.9e-18 Score=167.96 Aligned_cols=140 Identities=18% Similarity=0.211 Sum_probs=102.7
Q ss_pred EEEeccCCCCceEEEEECCCCcEEEEEEeecchhh---------------------------hHhHHHHHHHHHHhcccC
Q 004954 419 TEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF---------------------------FDQSLDEIKLLKLVNKND 471 (722)
Q Consensus 419 ~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~~---------------------------~~~~~~E~~il~~L~~~~ 471 (722)
.+.||+|++|.||+|.+. +|+.||||+++..... ......|...+.++.+.
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~- 79 (190)
T cd05145 2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEA- 79 (190)
T ss_pred CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhC-
Confidence 567999999999999986 8999999998764210 11124677788887654
Q ss_pred CCCCCceeEEEEEEEecCeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHH-CCCccccCCCC
Q 004954 472 PADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS-LGIIHCDLKPE 550 (722)
Q Consensus 472 ~~~hpnIv~l~~~f~~~~~l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs-~gIvHrDLKp~ 550 (722)
+|.....+... ..++||||++|..+....... ..++...+..++.|++.+|.+||+ .||+||||||+
T Consensus 80 -----~i~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~-----~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~ 147 (190)
T cd05145 80 -----GVPVPEPILLK--KNVLVMEFIGDDGSPAPRLKD-----VPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEY 147 (190)
T ss_pred -----CCCCceEEEec--CCEEEEEEecCCCchhhhhhh-----ccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChh
Confidence 33222222112 248999999876222111111 126788899999999999999999 99999999999
Q ss_pred ceEEcccCCCeEEEEecCCcccccC
Q 004954 551 NILIKSYQRCEIKIIDLGSSCFQTD 575 (722)
Q Consensus 551 NILl~~~~~~~vkL~DFGls~~~~~ 575 (722)
|||++ ++.++|+|||++.....
T Consensus 148 NIll~---~~~~~liDFG~a~~~~~ 169 (190)
T cd05145 148 NILYH---DGKPYIIDVSQAVELDH 169 (190)
T ss_pred hEEEE---CCCEEEEEcccceecCC
Confidence 99998 57899999999876543
No 428
>cd08392 C2A_SLP-3 C2 domain first repeat present in Synaptotagmin-like protein 3. All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. SHD of Slp (except for the Slp4-SHD) function as a specific Rab27A/B-binding domain. In addition to Slp, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. Little is known about the expression or localization of Slp3. The C2A domain of Slp3 is Ca2+ dependent. It has been demonstrated that Slp3 promotes dense-core vesicle exocytosis. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids
Probab=99.75 E-value=7e-19 Score=164.82 Aligned_cols=99 Identities=11% Similarity=-0.012 Sum_probs=90.1
Q ss_pred ccceeEEEEeec-CCccccCC-CCCCcceEEEecCCCCCcccceeeecccCCCcceeeeeecccccccCcc-cccccccc
Q 004954 264 NNDYGYLSSKEA-DLIDLQHN-VVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPAE 340 (722)
Q Consensus 264 s~~~l~v~l~e~-~L~~~d~~-g~sDpyvk~~l~~d~~~~~k~kt~~~k~tlnP~~nE~f~f~~~v~~~~~-~~~L~~~V 340 (722)
..+.|+|.|++| ||+++|.+ |.+|||||++|+|++++..|+||+++++++||+|||+|.|. ++.+.+ +++|.++|
T Consensus 13 ~~~~L~V~V~~a~nL~~~d~~~g~~dpYVkv~llp~~~~~~k~kT~v~~~t~nPvfNE~F~f~--v~~~~l~~~~L~v~V 90 (128)
T cd08392 13 RTSCLEITIKACRNLAYGDEKKKKCHPYVKVCLLPDKSHNSKRKTAVKKGTVNPVFNETLKYV--VEADLLSSRQLQVSV 90 (128)
T ss_pred CCCEEEEEEEecCCCCccCCCCCCCCeEEEEEEEeCCcccceeecccccCCCCCccceEEEEE--cCHHHhCCcEEEEEE
Confidence 457999999999 99999986 99999999999999988889999999999999999999999 887777 56799999
Q ss_pred cccCCCCCCccccccccCcccccc
Q 004954 341 IDNSDTRDGEVNGALHEGKADAEE 364 (722)
Q Consensus 341 ~D~D~~~~~d~iG~v~~~~~~~~~ 364 (722)
||++++++++++|++.++..+.+-
T Consensus 91 ~~~~~~~~~~~lG~~~i~L~~~~~ 114 (128)
T cd08392 91 WHSRTLKRRVFLGEVLIPLADWDF 114 (128)
T ss_pred EeCCCCcCcceEEEEEEEcCCccc
Confidence 999999999999999998766644
No 429
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.75 E-value=2.3e-17 Score=165.64 Aligned_cols=182 Identities=17% Similarity=0.124 Sum_probs=137.4
Q ss_pred EEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhH-----hHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 004954 417 YVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFD-----QSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (722)
Q Consensus 417 ~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~~~~-----~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (722)
.+...|++|+||+|+++.. .+.+++.+.+.....+.. .+.+|+++|++|.+ +++|++++++ +..
T Consensus 5 ~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~-----~~~vP~ll~~----~~~ 73 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDG-----LPRTPRLLHW----DGR 73 (218)
T ss_pred ccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCC-----CCCCCEEEEE----cCE
Confidence 4567899999999998864 778888887776554333 57789999999975 3578888875 457
Q ss_pred EEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccC-CCCceEEcccCCCeEEEEecCCc
Q 004954 492 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDL-KPENILIKSYQRCEIKIIDLGSS 570 (722)
Q Consensus 492 ~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDL-Kp~NILl~~~~~~~vkL~DFGls 570 (722)
+++|||+.|..+.... ... ...++.|++.+|.++|+.||+|||| ||+|||++. ++.++|+|||++
T Consensus 74 ~lvmeyI~G~~L~~~~-----------~~~-~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~--~g~i~LIDFG~A 139 (218)
T PRK12274 74 HLDRSYLAGAAMYQRP-----------PRG-DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQE--DGSPAVIDFQLA 139 (218)
T ss_pred EEEEeeecCccHHhhh-----------hhh-hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcC--CCCEEEEECCCc
Confidence 9999999886543211 011 1347789999999999999999999 799999985 678999999999
Q ss_pred ccccCCcc----------------ccccCCcccCchhhcCC-CCC-chhhHHHHHHHHHHHHhCCCCCCCC
Q 004954 571 CFQTDNLC----------------LYVQSRSYRAPEVIIGL-PYD-QKIDLWSLGCILAELWTGEVLFPND 623 (722)
Q Consensus 571 ~~~~~~~~----------------~~~gt~~y~APE~l~~~-~~s-~ksDIWSLGviL~elltG~~PF~~~ 623 (722)
........ ....++.|+.|+...-. ..+ ...++++.|+.+|.++|+..|+.++
T Consensus 140 ~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~ 210 (218)
T PRK12274 140 VRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWED 210 (218)
T ss_pred eecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcccc
Confidence 75443321 02357788888875432 234 5678999999999999999887543
No 430
>cd08381 C2B_PI3K_class_II C2 domain second repeat present in class II phosphatidylinositol 3-kinases (PI3Ks). There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a N-terminal C2 domain, a PIK domain, and a kinase catalytic domain. Unlike class I and class III, class II PI3Ks have additionally a PX domain and a C-terminal C2 domain containing a nuclear localization signal both of which bind phospholipids though in a slightly different fashion. PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permut
Probab=99.75 E-value=1e-18 Score=162.33 Aligned_cols=97 Identities=12% Similarity=0.054 Sum_probs=87.8
Q ss_pred cceeEEEEeec-CCccccCCCCCCcceEEEecCCCCCcccceeeecccCCCcceeeeeeccccc-ccCcc-ccccccccc
Q 004954 265 NDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDL-HFKGA-EKDLMPAEI 341 (722)
Q Consensus 265 ~~~l~v~l~e~-~L~~~d~~g~sDpyvk~~l~~d~~~~~k~kt~~~k~tlnP~~nE~f~f~~~v-~~~~~-~~~L~~~V~ 341 (722)
.+.|+|.|++| ||+++| +|.+|||||++|+|+.++..++||+++++++||+|||+|.|. + +.+.+ +.+|.++||
T Consensus 12 ~~~L~V~Vi~A~~L~~~~-~~~~DpyVkv~l~~~~~~~~~~kT~v~~~~~nP~wnE~F~f~--~~~~~~l~~~~L~~~V~ 88 (122)
T cd08381 12 NGTLFVMVMHAKNLPLLD-GSDPDPYVKTYLLPDPQKTTKRKTKVVRKTRNPTFNEMLVYD--GLPVEDLQQRVLQVSVW 88 (122)
T ss_pred CCEEEEEEEEeeCCCCCC-CCCCCCEEEEEEeeCCccCCceeCCccCCCCCCCcccEEEEe--cCChHHhCCCEEEEEEE
Confidence 57899999999 999999 999999999999999888889999999999999999999999 5 55555 566999999
Q ss_pred ccCCCCCCccccccccCcccccc
Q 004954 342 DNSDTRDGEVNGALHEGKADAEE 364 (722)
Q Consensus 342 D~D~~~~~d~iG~v~~~~~~~~~ 364 (722)
|+|++++++++|++.++..+...
T Consensus 89 d~d~~~~~~~lG~~~i~l~~l~~ 111 (122)
T cd08381 89 SHDSLVENEFLGGVCIPLKKLDL 111 (122)
T ss_pred eCCCCcCCcEEEEEEEecccccc
Confidence 99999999999999998876654
No 431
>cd08685 C2_RGS-like C2 domain of the Regulator Of G-Protein Signaling (RGS) family. This CD contains members of the regulator of G-protein signaling (RGS) family. RGS is a GTPase activating protein which inhibits G-protein mediated signal transduction. The protein is largely cytosolic, but G-protein activation leads to translocation of this protein to the plasma membrane. A nuclear form of this protein has also been described, but its sequence has not been identified. There are multiple alternatively spliced transcript variants in this family with some members having additional domains (ex. PDZ and RGS) downstream of the C2 domain. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind pho
Probab=99.74 E-value=1.7e-18 Score=160.24 Aligned_cols=97 Identities=15% Similarity=0.094 Sum_probs=88.3
Q ss_pred ccceeEEEEeec-CCccccCCCCCCcceEEEecCCCCCcccceeeecccCCCcceeeeeecccccccCcccccccccccc
Q 004954 264 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAEKDLMPAEID 342 (722)
Q Consensus 264 s~~~l~v~l~e~-~L~~~d~~g~sDpyvk~~l~~d~~~~~k~kt~~~k~tlnP~~nE~f~f~~~v~~~~~~~~L~~~V~D 342 (722)
..++|+|.|++| ||.++| +|.+|||||++|+|++++..++||+++++|+||+|||+|.|. ++.+..++.|.++|||
T Consensus 10 ~~~~L~V~Vi~ar~L~~~~-~g~~dpYVkv~l~p~~~~~~~~kT~v~~~t~~P~~nE~F~f~--v~~~~~~~~l~v~V~~ 86 (119)
T cd08685 10 QNRKLTLHVLEAKGLRSTN-SGTCNSYVKISLSPDKEVRFRQKTSTVPDSANPLFHETFSFD--VNERDYQKRLLVTVWN 86 (119)
T ss_pred cCCEEEEEEEEEECCCCCC-CCCCCeeEEEEEEeCCCCcceEeCccccCCCCCccccEEEEE--cChHHhCCEEEEEEEC
Confidence 457899999999 999999 899999999999999888889999999999999999999999 8777776678999999
Q ss_pred cCCCCC-CccccccccCccccc
Q 004954 343 NSDTRD-GEVNGALHEGKADAE 363 (722)
Q Consensus 343 ~D~~~~-~d~iG~v~~~~~~~~ 363 (722)
.+...+ ++++|+++++..+..
T Consensus 87 ~~~~~~~~~~lG~~~i~l~~~~ 108 (119)
T cd08685 87 KLSKSRDSGLLGCMSFGVKSIV 108 (119)
T ss_pred CCCCcCCCEEEEEEEecHHHhc
Confidence 999874 799999999987775
No 432
>cd08393 C2A_SLP-1_2 C2 domain first repeat present in Synaptotagmin-like proteins 1 and 2. All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. Slp1/JFC1 and Slp2/exophilin 4 promote granule docking to the plasma membrane. Additionally, their C2A domains are both Ca2+ independent, unlike Slp3 and Slp4/granuphilin which are Ca2+ dependent. It is thought that SHD (except for the Slp4-SHD) functions as a specific Rab27A/B-binding domain. In addition to Slps, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety
Probab=99.73 E-value=2.1e-18 Score=160.98 Aligned_cols=99 Identities=10% Similarity=-0.006 Sum_probs=89.3
Q ss_pred ccceeEEEEeec-CCccccCC-CCCCcceEEEecCCCCCcccceeeecccCCCcceeeeeecccccccCcc-cccccccc
Q 004954 264 NNDYGYLSSKEA-DLIDLQHN-VVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPAE 340 (722)
Q Consensus 264 s~~~l~v~l~e~-~L~~~d~~-g~sDpyvk~~l~~d~~~~~k~kt~~~k~tlnP~~nE~f~f~~~v~~~~~-~~~L~~~V 340 (722)
....|+|.|++| ||+++|.+ |.+|||||++|+|+++...++||+++++|+||+|||+|.|. ++.+.+ +++|.++|
T Consensus 13 ~~~~L~V~vi~a~~L~~~d~~~g~~dpyVkv~l~p~~~~~~~~kT~v~~~t~nP~~nE~f~f~--v~~~~l~~~~L~~~V 90 (125)
T cd08393 13 KLRELHVHVIQCQDLAAADPKKQRSDPYVKTYLLPDKSNRGKRKTSVKKKTLNPVFNETLRYK--VEREELPTRVLNLSV 90 (125)
T ss_pred CCCEEEEEEEEeCCCCCcCCCCCCCCcEEEEEEEcCCCccccccCccCcCCCCCccCceEEEE--CCHHHhCCCEEEEEE
Confidence 456899999999 99999986 89999999999999887788999999999999999999999 887666 56699999
Q ss_pred cccCCCCCCccccccccCcccccc
Q 004954 341 IDNSDTRDGEVNGALHEGKADAEE 364 (722)
Q Consensus 341 ~D~D~~~~~d~iG~v~~~~~~~~~ 364 (722)
||+|++++++++|++.+...+.+-
T Consensus 91 ~d~~~~~~~~~iG~~~i~L~~~~~ 114 (125)
T cd08393 91 WHRDSLGRNSFLGEVEVDLGSWDW 114 (125)
T ss_pred EeCCCCCCCcEeEEEEEecCcccc
Confidence 999999999999999998766543
No 433
>cd08408 C2B_Synaptotagmin-14_16 C2 domain second repeat present in Synaptotagmins 14 and 16. Synaptotagmin 14 and 16 are membrane-trafficking proteins in specific tissues outside the brain. Both of these contain C-terminal tandem C2 repeats, but only Synaptotagmin 14 has an N-terminal transmembrane domain and a putative fatty-acylation site. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium and this is indeed the case here. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicle
Probab=99.73 E-value=9.9e-19 Score=165.92 Aligned_cols=105 Identities=15% Similarity=0.079 Sum_probs=91.0
Q ss_pred ccceeEEEEeec-CCccccCCCCCCcceEEEecCCCC-CcccceeeecccCCCcceeeeeecccccccCcc-cccccccc
Q 004954 264 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPG-TEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPAE 340 (722)
Q Consensus 264 s~~~l~v~l~e~-~L~~~d~~g~sDpyvk~~l~~d~~-~~~k~kt~~~k~tlnP~~nE~f~f~~~v~~~~~-~~~L~~~V 340 (722)
..++|+|+|++| ||+++|.+|..|||||++|+|+.+ +..|+||+++++++||+|||+|.|. ++.+++ +++|.++|
T Consensus 13 ~~~~L~V~VikarnL~~~~~~~~~dpyVkv~llp~~~~~~~~~kT~v~~~t~nPvfnEtF~f~--i~~~~l~~~~L~~~V 90 (138)
T cd08408 13 LTGRLSVEVIKGSNFKNLAMNKAPDTYVKLTLLNSDGQEISKSKTSIRRGQPDPEFKETFVFQ--VALFQLSEVTLMFSV 90 (138)
T ss_pred CCCeEEEEEEEecCCCccccCCCCCeeEEEEEEeCCCcceeeccceeecCCCCCcEeeeEEEE--CCHHHhCccEEEEEE
Confidence 568999999999 999999999999999999999754 4468899999999999999999999 888777 56699999
Q ss_pred cccCCCCCCccccccccCccccccccCCCc
Q 004954 341 IDNSDTRDGEVNGALHEGKADAEEHGVATP 370 (722)
Q Consensus 341 ~D~D~~~~~d~iG~v~~~~~~~~~e~~~~~ 370 (722)
||++++++++++|++.++......+....|
T Consensus 91 ~~~~~~~~~~~iG~v~l~~~~~~~~~~~hW 120 (138)
T cd08408 91 YNKRKMKRKEMIGWFSLGLNSSGEEEEEHW 120 (138)
T ss_pred EECCCCCCCcEEEEEEECCcCCCchHHHHH
Confidence 999999999999999998765544444443
No 434
>cd04029 C2A_SLP-4_5 C2 domain first repeat present in Synaptotagmin-like proteins 4 and 5. All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. SHD of Slp (except for the Slp4-SHD) function as a specific Rab27A/B-binding domain. In addition to Slp, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. It has been demonstrated that Slp4/granuphilin promotes dense-core vesicle exocytosis. The C2A domain of Slp4 is Ca2+ dependent. Slp5 mRNA has been shown to be restricted to human placenta and liver suggesting a role in Rab27A-dependent membrane trafficking in specific tissues. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2
Probab=99.71 E-value=8.2e-18 Score=156.99 Aligned_cols=99 Identities=11% Similarity=0.017 Sum_probs=88.8
Q ss_pred ccceeEEEEeec-CCccccC-CCCCCcceEEEecCCCCCcccceeeecccCCCcceeeeeecccccccCcc-cccccccc
Q 004954 264 NNDYGYLSSKEA-DLIDLQH-NVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPAE 340 (722)
Q Consensus 264 s~~~l~v~l~e~-~L~~~d~-~g~sDpyvk~~l~~d~~~~~k~kt~~~k~tlnP~~nE~f~f~~~v~~~~~-~~~L~~~V 340 (722)
..+.|+|.|++| ||.++|. +|.+|||||++++|++.+..++||+++++++||+|||+|.|. ++.+.+ ++.|.++|
T Consensus 13 ~~~~L~V~Vi~a~~L~~~~~~~~~~DpyVkv~l~p~~~~~~~~kT~v~~~t~nP~wnE~f~f~--i~~~~l~~~~L~~~V 90 (125)
T cd04029 13 KTQSLNVHVKECRNLAYGDEAKKRSNPYVKTYLLPDKSRQSKRKTSIKRNTTNPVYNETLKYS--ISHSQLETRTLQLSV 90 (125)
T ss_pred CCCeEEEEEEEecCCCccCCCCCCCCcEEEEEEEcCCccccceEeeeeeCCCCCcccceEEEE--CCHHHhCCCEEEEEE
Confidence 567899999999 9999986 589999999999999887788999999999999999999999 887766 55699999
Q ss_pred cccCCCCCCccccccccCcccccc
Q 004954 341 IDNSDTRDGEVNGALHEGKADAEE 364 (722)
Q Consensus 341 ~D~D~~~~~d~iG~v~~~~~~~~~ 364 (722)
||+|.+++++++|++.++..+..-
T Consensus 91 ~d~~~~~~~~~lG~~~i~l~~~~~ 114 (125)
T cd04029 91 WHYDRFGRNTFLGEVEIPLDSWNF 114 (125)
T ss_pred EECCCCCCCcEEEEEEEeCCcccc
Confidence 999999999999999998766544
No 435
>PRK10345 hypothetical protein; Provisional
Probab=99.71 E-value=1.2e-16 Score=162.17 Aligned_cols=139 Identities=21% Similarity=0.234 Sum_probs=106.7
Q ss_pred EEEeccCCCCceEEEEECCCCcEEEEEEeecc-hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC---e-EEE
Q 004954 419 TEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND-KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE---H-LFI 493 (722)
Q Consensus 419 ~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~-~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~---~-l~i 493 (722)
.+.||+|+||.||. +..++.. +||++... ....+...+|+++++.+.+. ..+||||+++++++.+.. . ..+
T Consensus 7 ~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~-~~~h~nIvr~yg~~et~~g~g~v~~~ 82 (210)
T PRK10345 7 QSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRR-LIDWSGIPRYYGTVETDCGTGYVYDV 82 (210)
T ss_pred cceecCCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhcc-CCCCcccceeeEEEEeCCCCeEEEEE
Confidence 35799999999996 6667666 79988754 22446789999999999763 467999999999999873 4 347
Q ss_pred EEEccc---cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHH-HHHHHCCCccccCCCCceEEccc--CCCeEEEEec
Q 004954 494 VCELLR---ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEAL-EYLHSLGIIHCDLKPENILIKSY--QRCEIKIIDL 567 (722)
Q Consensus 494 VmEy~~---gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL-~yLHs~gIvHrDLKp~NILl~~~--~~~~vkL~DF 567 (722)
||||.+ ++|.+++.... +++. ..++.|++.++ +|||+.+|+||||||+|||++.. ....++|+||
T Consensus 83 I~e~~G~~~~tL~~~l~~~~-------~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg 153 (210)
T PRK10345 83 IADFDGKPSITLTEFAEQCR-------YEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDN 153 (210)
T ss_pred EecCCCCcchhHHHHHHccc-------ccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEEC
Confidence 899954 57888775321 4444 35677888777 89999999999999999999853 2347999995
Q ss_pred CCc
Q 004954 568 GSS 570 (722)
Q Consensus 568 Gls 570 (722)
+.+
T Consensus 154 ~G~ 156 (210)
T PRK10345 154 IGE 156 (210)
T ss_pred CCC
Confidence 443
No 436
>smart00090 RIO RIO-like kinase.
Probab=99.68 E-value=1.3e-16 Score=165.13 Aligned_cols=144 Identities=16% Similarity=0.158 Sum_probs=108.9
Q ss_pred EEEEEEeccCCCCceEEEE-ECCCCcEEEEEEeecchh-------------------------hhHhHHHHHHHHHHhcc
Q 004954 416 YYVTEYLGSAAFSKVFQAQ-DLHTGVDVCLKIIKNDKD-------------------------FFDQSLDEIKLLKLVNK 469 (722)
Q Consensus 416 Y~i~~~LG~G~fG~Vy~a~-d~~tg~~vAvKil~~~~~-------------------------~~~~~~~E~~il~~L~~ 469 (722)
|.+.+.||+|++|.||+|. +..+|+.||||+++.... ......+|..+++.+..
T Consensus 30 ~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~ 109 (237)
T smart00090 30 SAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYE 109 (237)
T ss_pred HHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 7889999999999999999 678999999999875321 01124578999999974
Q ss_pred cCCCCCCceeEEEEEEEecCeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCC-CccccCC
Q 004954 470 NDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLG-IIHCDLK 548 (722)
Q Consensus 470 ~~~~~hpnIv~l~~~f~~~~~l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~g-IvHrDLK 548 (722)
. ...++++++. ...++||||++|..+....... ..+....+..++.||+.+|.+||+.| |+|||||
T Consensus 110 ~----~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dik 176 (237)
T smart00090 110 A----GVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKD-----VEPEEEEEFELYDDILEEMRKLYKEGELVHGDLS 176 (237)
T ss_pred c----CCCCCeeeEe----cCceEEEEEecCCccccccccc-----CCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCC
Confidence 2 2234455543 2348999999985433222111 12556677899999999999999999 9999999
Q ss_pred CCceEEcccCCCeEEEEecCCcccccC
Q 004954 549 PENILIKSYQRCEIKIIDLGSSCFQTD 575 (722)
Q Consensus 549 p~NILl~~~~~~~vkL~DFGls~~~~~ 575 (722)
|+||+++ ++.++|+|||.+.....
T Consensus 177 p~NIli~---~~~i~LiDFg~a~~~~~ 200 (237)
T smart00090 177 EYNILVH---DGKVVIIDVSQSVELDH 200 (237)
T ss_pred hhhEEEE---CCCEEEEEChhhhccCC
Confidence 9999998 56899999999875444
No 437
>cd08395 C2C_Munc13 C2 domain third repeat in Munc13 (mammalian uncoordinated) proteins. C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, synaptobrevi
Probab=99.68 E-value=3e-17 Score=151.71 Aligned_cols=97 Identities=16% Similarity=0.045 Sum_probs=81.2
Q ss_pred eeEEEEeec-CCccccCCCCCCcceEEEecC--CCCCcccceeeecccCCCcceeeeeecccccccC-cc-ccccccccc
Q 004954 267 YGYLSSKEA-DLIDLQHNVVGDSSTDCDLAP--HPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFK-GA-EKDLMPAEI 341 (722)
Q Consensus 267 ~l~v~l~e~-~L~~~d~~g~sDpyvk~~l~~--d~~~~~k~kt~~~k~tlnP~~nE~f~f~~~v~~~-~~-~~~L~~~V~ 341 (722)
+|+|+|.+| ||+++| .|.+|||||++|.- ...+.+|++|+++++|+||+|||+|.|. ++.+ .. ...|.+.||
T Consensus 1 kL~V~Vi~A~~L~~~d-~g~~DPYVkV~l~g~~~~~k~~k~kTkv~~~tlnPvwNE~f~F~--v~~~~~~~~~~L~~~V~ 77 (120)
T cd08395 1 KVTVKVVAANDLKWQT-TGMFRPFVEVNLIGPHLSDKKRKFATKSKNNNWSPKYNETFQFI--LGNEDDPESYELHICVK 77 (120)
T ss_pred CEEEEEEECcCCCccc-CCCCCCEEEEEEecCCCcccccEeeeEEecCCCCCccCcEEEEE--eeCcCCCceeEEEEEEE
Confidence 589999999 999999 49999999999962 2333457889999999999999999999 7754 34 455999999
Q ss_pred ccCCCCCCccccccccCcccccccc
Q 004954 342 DNSDTRDGEVNGALHEGKADAEEHG 366 (722)
Q Consensus 342 D~D~~~~~d~iG~v~~~~~~~~~e~ 366 (722)
|+|.++++++||.+.++.......+
T Consensus 78 D~d~~~~dd~IG~~~l~l~~~~~~~ 102 (120)
T cd08395 78 DYCFARDDRLVGVTVLQLRDIAQAG 102 (120)
T ss_pred EecccCCCCEEEEEEEEHHHCcCCC
Confidence 9998888999999999877666544
No 438
>cd08409 C2B_Synaptotagmin-15 C2 domain second repeat present in Synaptotagmin 15. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. It is thought to be involved in the trafficking and exocytosis of secretory vesicles in non-neuronal tissues and is Ca2+ independent. Human synaptotagmin 15 has 2 alternatively spliced forms that encode proteins with different C-termini. The larger, SYT15a, contains a N-terminal TM region, a putative fatty-acylation site, and 2 tandem C terminal C2 domains. The smaller, SYT15b, lacks the C-terminal portion of the second C2 domain. Unlike most other synaptotagmins it is nearly absent in the brain and rather is found in the heart, lungs, skeletal muscle, and testis. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 id
Probab=99.67 E-value=1.9e-17 Score=156.99 Aligned_cols=106 Identities=13% Similarity=0.067 Sum_probs=90.8
Q ss_pred ccceeEEEEeec-CCccccCCCCCCcceEEEecCCCCCcccceeeecccCCCcceeeeeecccccccCccc-cccccccc
Q 004954 264 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAE-KDLMPAEI 341 (722)
Q Consensus 264 s~~~l~v~l~e~-~L~~~d~~g~sDpyvk~~l~~d~~~~~k~kt~~~k~tlnP~~nE~f~f~~~v~~~~~~-~~L~~~V~ 341 (722)
..++|+|.|++| ||+++| .|.+|||||+.|.|++++.+++||+++++++||+|||+|.|. ++.+.++ .+|.++||
T Consensus 13 ~~~~L~V~V~~a~nL~~~~-~~~~d~yVkv~l~~~~~~~~~~kT~v~~~~~nP~fnE~F~f~--i~~~~l~~~~L~~~V~ 89 (137)
T cd08409 13 TLNRLTVVVLRARGLRQLD-HAHTSVYVKVSLMIHNKVVKTKKTEVVDGAASPSFNESFSFK--VTSRQLDTASLSLSVM 89 (137)
T ss_pred CCCeEEEEEEEecCCCccc-CCCCCeEEEEEEEECCEEeeeeecccEeCCCCCcccceEEEE--CCHHHhCccEEEEEEE
Confidence 457899999999 999999 888999999999998777778899999999999999999999 8888774 66999999
Q ss_pred ccCCCCCCccccccccCccc-cccccCCCcch
Q 004954 342 DNSDTRDGEVNGALHEGKAD-AEEHGVATPDL 372 (722)
Q Consensus 342 D~D~~~~~d~iG~v~~~~~~-~~~e~~~~~~~ 372 (722)
|.+.+++++++|++.++... ..++....|..
T Consensus 90 ~~~~~~~~~~lG~v~ig~~~~~~~~~~~hW~~ 121 (137)
T cd08409 90 QSGGVRKSKLLGRVVLGPFMYARGKELEHWND 121 (137)
T ss_pred eCCCCCCcceEEEEEECCcccCCChHHHHHHH
Confidence 99999999999999998543 23344455444
No 439
>cd08410 C2B_Synaptotagmin-17 C2 domain second repeat present in Synaptotagmin 17. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 17 is located in the brain, kidney, and prostate and is thought to be a peripheral membrane protein. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-
Probab=99.65 E-value=4.4e-17 Score=154.11 Aligned_cols=99 Identities=11% Similarity=0.020 Sum_probs=87.2
Q ss_pred ccceeEEEEeec-CCccccCCCCCCcceEEEecCCCCCcccceeeecccCCCcceeeeeecccccccCcc-ccccccccc
Q 004954 264 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPAEI 341 (722)
Q Consensus 264 s~~~l~v~l~e~-~L~~~d~~g~sDpyvk~~l~~d~~~~~k~kt~~~k~tlnP~~nE~f~f~~~v~~~~~-~~~L~~~V~ 341 (722)
+.+.|+|.|++| +|+++|.+|.+|||||+.+.++.+...++||+++++|+||+|||+|.|. ++.+.. +..|.++||
T Consensus 12 ~~~~L~V~vi~a~~L~~~d~~g~~DPyV~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~F~f~--i~~~~l~~~~l~~~V~ 89 (135)
T cd08410 12 SAGRLNVDIIRAKQLLQTDMSQGSDPFVKIQLVHGLKLIKTKKTSCMRGTIDPFYNESFSFK--VPQEELENVSLVFTVY 89 (135)
T ss_pred CCCeEEEEEEEecCCCcccCCCCCCeEEEEEEEcCCcccceEcCccccCCCCCccceeEEEe--CCHHHhCCCEEEEEEE
Confidence 557899999999 9999999999999999999887776678899999999999999999999 877766 445999999
Q ss_pred ccCCCCCCccccccccCcccccc
Q 004954 342 DNSDTRDGEVNGALHEGKADAEE 364 (722)
Q Consensus 342 D~D~~~~~d~iG~v~~~~~~~~~ 364 (722)
|+|..++++++|++.++......
T Consensus 90 d~d~~~~~~~iG~~~l~~~~~~~ 112 (135)
T cd08410 90 GHNVKSSNDFIGRIVIGQYSSGP 112 (135)
T ss_pred eCCCCCCCcEEEEEEEcCccCCc
Confidence 99999999999999877644444
No 440
>cd08384 C2B_Rabphilin_Doc2 C2 domain second repeat present in Rabphilin and Double C2 domain. Rabphilin is found neurons and in neuroendrocrine cells, while Doc2 is found not only in the brain but in tissues, including mast cells, chromaffin cells, and osteoblasts. Rabphilin and Doc2s share highly homologous tandem C2 domains, although their N-terminal structures are completely different: rabphilin contains an N-terminal Rab-binding domain (RBD),7 whereas Doc2 contains an N-terminal Munc13-1-interacting domain (MID). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domai
Probab=99.64 E-value=1e-16 Score=150.98 Aligned_cols=96 Identities=16% Similarity=0.147 Sum_probs=87.2
Q ss_pred ccceeEEEEeec-CCccccCCCCCCcceEEEecCCCCCcccceeeecccCCCcceeeeeecccccccCcc-ccccccccc
Q 004954 264 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPAEI 341 (722)
Q Consensus 264 s~~~l~v~l~e~-~L~~~d~~g~sDpyvk~~l~~d~~~~~k~kt~~~k~tlnP~~nE~f~f~~~v~~~~~-~~~L~~~V~ 341 (722)
..+.|+|.|.+| ||+++|..|.+|||||+.+.++..+..++||+++++|+||+|||+|.|. ++...+ ++.|.++||
T Consensus 11 ~~~~L~V~Vi~a~~L~~~d~~~~~DpyV~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~--~~~~~l~~~~l~~~V~ 88 (133)
T cd08384 11 QRRGLIVGIIRCVNLAAMDANGYSDPFVKLYLKPDAGKKSKHKTQVKKKTLNPEFNEEFFYD--IKHSDLAKKTLEITVW 88 (133)
T ss_pred CCCEEEEEEEEEcCCCCcCCCCCCCcEEEEEEEcCCCccCCceeeeEeccCCCCcccEEEEE--CCHHHhCCCEEEEEEE
Confidence 457899999999 9999999999999999999998777778999999999999999999999 776655 566999999
Q ss_pred ccCCCCCCccccccccCccc
Q 004954 342 DNSDTRDGEVNGALHEGKAD 361 (722)
Q Consensus 342 D~D~~~~~d~iG~v~~~~~~ 361 (722)
|+|.+++++++|++.++...
T Consensus 89 d~d~~~~~~~lG~~~i~l~~ 108 (133)
T cd08384 89 DKDIGKSNDYIGGLQLGINA 108 (133)
T ss_pred eCCCCCCccEEEEEEEecCC
Confidence 99999999999999998754
No 441
>cd08404 C2B_Synaptotagmin-4 C2 domain second repeat present in Synaptotagmin 4. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 4, a member of class 4 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmin-11, has an Asp to Ser substitution in its C2A domain. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling s
Probab=99.64 E-value=9.7e-17 Score=151.88 Aligned_cols=103 Identities=14% Similarity=0.043 Sum_probs=89.6
Q ss_pred ccceeEEEEeec-CCccccCCCCCCcceEEEecCCCCCcccceeeecccCCCcceeeeeecccccccCcc-ccccccccc
Q 004954 264 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPAEI 341 (722)
Q Consensus 264 s~~~l~v~l~e~-~L~~~d~~g~sDpyvk~~l~~d~~~~~k~kt~~~k~tlnP~~nE~f~f~~~v~~~~~-~~~L~~~V~ 341 (722)
..+.|+|.|++| ||+++|.+|.+|||||+++.+++++..++||+++++|+||+|||+|.|. ++.... +..|.++||
T Consensus 13 ~~~~L~V~vi~a~~L~~~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~k~t~nP~w~e~F~f~--v~~~~~~~~~l~~~v~ 90 (136)
T cd08404 13 TTNRLTVVVLKARHLPKMDVSGLADPYVKVNLYYGKKRISKKKTHVKKCTLNPVFNESFVFD--IPSEELEDISVEFLVL 90 (136)
T ss_pred CCCeEEEEEEEeeCCCccccCCCCCeEEEEEEEcCCceeeeEcCccccCCCCCccCceEEEE--CCHHHhCCCEEEEEEE
Confidence 457899999999 9999999999999999999998776678999999999999999999999 876666 455999999
Q ss_pred ccCCCCCCccccccccCccccccccCCC
Q 004954 342 DNSDTRDGEVNGALHEGKADAEEHGVAT 369 (722)
Q Consensus 342 D~D~~~~~d~iG~v~~~~~~~~~e~~~~ 369 (722)
|+|++++++++|++.++... .+++...
T Consensus 91 d~d~~~~~~~iG~~~~~~~~-~~~~~~~ 117 (136)
T cd08404 91 DSDRVTKNEVIGRLVLGPKA-SGSGGHH 117 (136)
T ss_pred ECCCCCCCccEEEEEECCcC-CCchHHH
Confidence 99999999999999998876 3444333
No 442
>KOG1028 consensus Ca2+-dependent phospholipid-binding protein Synaptotagmin, required for synaptic vesicle and secretory granule exocytosis [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.63 E-value=1.8e-16 Score=176.22 Aligned_cols=97 Identities=11% Similarity=0.055 Sum_probs=87.2
Q ss_pred ccceeEEEEeec-CCccccCCCCCCcceEEEecCCCCCcccceeeecccCCCcceeeeeecccccccCcc-ccccccccc
Q 004954 264 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPAEI 341 (722)
Q Consensus 264 s~~~l~v~l~e~-~L~~~d~~g~sDpyvk~~l~~d~~~~~k~kt~~~k~tlnP~~nE~f~f~~~v~~~~~-~~~L~~~V~ 341 (722)
....|+|.|++| +|+++|..|.+|||||++|+||+ +.|.||+++|+|+||+|||+|.|. |+.+++ .++|.++||
T Consensus 165 ~~~~L~V~V~qa~~Lp~~d~~g~sdpyVK~~llPdk--~~k~kT~v~r~tlnP~fnEtf~f~--v~~~~l~~~~L~l~V~ 240 (421)
T KOG1028|consen 165 ELNLLTVRVIQAHDLPAKDRGGTSDPYVKVYLLPDK--KGKFKTRVHRKTLNPVFNETFRFE--VPYEELSNRVLHLSVY 240 (421)
T ss_pred cCCEEEEEEEEecCCCcccCCCCCCCeeEEEEcCCC--CCcceeeeeecCcCCccccceEee--cCHHHhccCEEEEEEE
Confidence 567899999999 99999988899999999999998 469999999999999999999999 787766 778999999
Q ss_pred ccCCCCCCccccccccCcccccc
Q 004954 342 DNSDTRDGEVNGALHEGKADAEE 364 (722)
Q Consensus 342 D~D~~~~~d~iG~v~~~~~~~~~ 364 (722)
|+|+|++++++|++.+....++.
T Consensus 241 ~~drfsr~~~iGev~~~l~~~~~ 263 (421)
T KOG1028|consen 241 DFDRFSRHDFIGEVILPLGEVDL 263 (421)
T ss_pred ecCCcccccEEEEEEecCccccc
Confidence 99999999999999887443333
No 443
>cd04020 C2B_SLP_1-2-3-4 C2 domain second repeat present in Synaptotagmin-like proteins 1-4. All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. Slp1/JFC1 and Slp2/exophilin 4 promote granule docking to the plasma membrane. Additionally, their C2A domains are both Ca2+ independent, unlike the case in Slp3 and Slp4/granuphilin in which their C2A domains are Ca2+ dependent. It is thought that SHD (except for the Slp4-SHD) functions as a specific Rab27A/B-binding domain. In addition to Slps, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. It has been demonstrated that Slp3 and Slp4/granuphilin promote dense-core vesicle exocytosis. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involvin
Probab=99.62 E-value=4e-16 Score=152.11 Aligned_cols=118 Identities=18% Similarity=0.192 Sum_probs=97.3
Q ss_pred ccceeEEEEeec-CCccccCCCCCCcceEEEecCCCCCcccceeeecccCCCcceeeeeecccccccCcc-ccccccccc
Q 004954 264 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPAEI 341 (722)
Q Consensus 264 s~~~l~v~l~e~-~L~~~d~~g~sDpyvk~~l~~d~~~~~k~kt~~~k~tlnP~~nE~f~f~~~v~~~~~-~~~L~~~V~ 341 (722)
+.+.|+|.|.+| ||+++|..|.+|||||++++++..+..++||+++++|+||.|||+|.|.. ++.+.+ +..|.++||
T Consensus 25 ~~g~L~V~Vi~A~nL~~~d~~g~~DPYVkv~l~~~~~~~~~~kT~vi~~t~nP~WnE~f~f~~-~~~~~l~~~~L~i~V~ 103 (162)
T cd04020 25 STGELHVWVKEAKNLPALKSGGTSDSFVKCYLLPDKSKKSKQKTPVVKKSVNPVWNHTFVYDG-VSPEDLSQACLELTVW 103 (162)
T ss_pred CCceEEEEEEeeeCCCCCCCCCCCCCEEEEEEEcCCCCCcceeCCccCCCCCCCCCCEEEEec-CCHHHhCCCEEEEEEE
Confidence 568899999999 99999999999999999999988777899999999999999999999983 333343 556999999
Q ss_pred ccCCCCCCccccccccCccccccccCCCcchhhhhhhHhHhhhh
Q 004954 342 DNSDTRDGEVNGALHEGKADAEEHGVATPDLLMFDNLEEECEIF 385 (722)
Q Consensus 342 D~D~~~~~d~iG~v~~~~~~~~~e~~~~~~~l~f~~L~ee~~~~ 385 (722)
|+|.+++++++|++.++..+....+. ...|++...+|..++
T Consensus 104 d~d~~~~d~~lG~v~i~l~~~~~~~~---~~~w~~~~~~~~~~w 144 (162)
T cd04020 104 DHDKLSSNDFLGGVRLGLGTGKSYGQ---AVDWMDSTGEEILLW 144 (162)
T ss_pred eCCCCCCCceEEEEEEeCCccccCCC---ccccccCChHHHHHH
Confidence 99999999999999998877655432 233665555555444
No 444
>cd08403 C2B_Synaptotagmin-3-5-6-9-10 C2 domain second repeat present in Synaptotagmins 3, 5, 6, 9, and 10. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 3, a member of class 3 synaptotagmins, is located in the brain and localized to the active zone and plasma membrane. It functions as a Ca2+ sensor for fast exocytosis. It, along with synaptotagmins 5,6, and 10, has disulfide bonds at its N-terminus. Synaptotagmin 9, a class 5 synaptotagmins, is located in the brain and localized to the synaptic vesicles. It is thought to be a Ca2+-sensor for dense-core vesicle exocytosis. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind
Probab=99.61 E-value=2.7e-16 Score=148.42 Aligned_cols=95 Identities=16% Similarity=0.091 Sum_probs=85.8
Q ss_pred ccceeEEEEeec-CCccccCCCCCCcceEEEecCCCCCcccceeeecccCCCcceeeeeecccccccCccc-cccccccc
Q 004954 264 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAE-KDLMPAEI 341 (722)
Q Consensus 264 s~~~l~v~l~e~-~L~~~d~~g~sDpyvk~~l~~d~~~~~k~kt~~~k~tlnP~~nE~f~f~~~v~~~~~~-~~L~~~V~ 341 (722)
..+.|+|.|.+| +|+++|..|.+|||||++|.+++++..++||+++++++||.|||+|.|. ++.+..+ ..|.++||
T Consensus 12 ~~~~L~V~v~~A~~L~~~d~~g~~dpyvkv~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~--i~~~~~~~~~l~~~v~ 89 (134)
T cd08403 12 TAGRLTLTIIKARNLKAMDITGFSDPYVKVSLMCEGRRLKKKKTSVKKNTLNPTYNEALVFD--VPPENVDNVSLIIAVV 89 (134)
T ss_pred CCCEEEEEEEEeeCCCccccCCCCCceEEEEEEeCCcccceecCCcccCCCCCcccceEEEE--CCHHHhCCCEEEEEEE
Confidence 457899999999 9999999999999999999988776678899999999999999999998 7776664 45999999
Q ss_pred ccCCCCCCccccccccCcc
Q 004954 342 DNSDTRDGEVNGALHEGKA 360 (722)
Q Consensus 342 D~D~~~~~d~iG~v~~~~~ 360 (722)
|++++++++++|++.++..
T Consensus 90 d~~~~~~~~~IG~~~l~~~ 108 (134)
T cd08403 90 DYDRVGHNELIGVCRVGPN 108 (134)
T ss_pred ECCCCCCCceeEEEEECCC
Confidence 9999999999999999865
No 445
>cd08402 C2B_Synaptotagmin-1 C2 domain second repeat present in Synaptotagmin 1. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 1, a member of the class 1 synaptotagmins, is located in the brain and endocranium and localized to the synaptic vesicles and secretory granules. It functions as a Ca2+ sensor for fast exocytosis. It, like synaptotagmin-2, has an N-glycosylated N-terminus. Synaptotagmin 4, a member of class 4 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmin-11, has an Asp to Ser substitution in its C2A domain. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are:
Probab=99.61 E-value=2.7e-16 Score=148.82 Aligned_cols=103 Identities=15% Similarity=0.103 Sum_probs=89.1
Q ss_pred ccceeEEEEeec-CCccccCCCCCCcceEEEecCCCCCcccceeeecccCCCcceeeeeecccccccCccc-cccccccc
Q 004954 264 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAE-KDLMPAEI 341 (722)
Q Consensus 264 s~~~l~v~l~e~-~L~~~d~~g~sDpyvk~~l~~d~~~~~k~kt~~~k~tlnP~~nE~f~f~~~v~~~~~~-~~L~~~V~ 341 (722)
+.+.|+|.|.+| +|+++|.+|.+||||++++.+++++..+++|+++++++||+|||+|.|. ++.+.++ ..|.++||
T Consensus 13 ~~~~l~V~Vi~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~--i~~~~l~~~~l~~~v~ 90 (136)
T cd08402 13 TAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKRTLNPYYNESFSFE--VPFEQIQKVHLIVTVL 90 (136)
T ss_pred CCCeEEEEEEEeeCCCcccCCCCCCCeEEEEEEECCcccceeeccceeCCCCCcccceEEEE--CCHHHhCCCEEEEEEE
Confidence 567899999999 9999999999999999999987776678899999999999999999999 7766664 45999999
Q ss_pred ccCCCCCCccccccccCccccccccCCC
Q 004954 342 DNSDTRDGEVNGALHEGKADAEEHGVAT 369 (722)
Q Consensus 342 D~D~~~~~d~iG~v~~~~~~~~~e~~~~ 369 (722)
|++++++++++|.+.++.... ++....
T Consensus 91 d~~~~~~~~~iG~~~i~~~~~-~~~~~~ 117 (136)
T cd08402 91 DYDRIGKNDPIGKVVLGCNAT-GAELRH 117 (136)
T ss_pred eCCCCCCCceeEEEEECCccC-ChHHHH
Confidence 999999999999999988653 333344
No 446
>cd08388 C2A_Synaptotagmin-4-11 C2A domain first repeat present in Synaptotagmins 4 and 11. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmins 4 and 11, class 4 synaptotagmins, are located in the brain. Their functions are unknown. They are distinguished from the other synaptotagmins by having and Asp to Ser substitution in their C2A domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence
Probab=99.61 E-value=6.5e-16 Score=144.80 Aligned_cols=98 Identities=14% Similarity=0.097 Sum_probs=83.9
Q ss_pred ccceeEEEEeec-CCccccCC-CCCCcceEEEecCCCCCcccceeeecccCCCcceeeeeecccccccCcc-cccccccc
Q 004954 264 NNDYGYLSSKEA-DLIDLQHN-VVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPAE 340 (722)
Q Consensus 264 s~~~l~v~l~e~-~L~~~d~~-g~sDpyvk~~l~~d~~~~~k~kt~~~k~tlnP~~nE~f~f~~~v~~~~~-~~~L~~~V 340 (722)
....|+|.|.+| ||+++|.. |.+||||++.|+|+++ +++||+++++|+||+|||+|.|.. ++.+.. +..|.++|
T Consensus 14 ~~~~L~V~Vi~a~~L~~~~~~~~~~DpyV~v~l~~~~~--~~~kT~v~~~t~nP~wnE~F~f~~-~~~~~~~~~~L~~~V 90 (128)
T cd08388 14 EKKALLVNIIECRDLPAMDEQSGTSDPYVKLQLLPEKE--HKVKTRVLRKTRNPVYDETFTFYG-IPYNQLQDLSLHFAV 90 (128)
T ss_pred CCCEEEEEEEEeECCCCCCCCCCCcCCEEEEEEeCCcC--ceeeccEEcCCCCCceeeEEEEcc-cCHHHhCCCEEEEEE
Confidence 457899999999 99999987 9999999999998754 467899999999999999999931 665555 55699999
Q ss_pred cccCCCCCCccccccccCcccccc
Q 004954 341 IDNSDTRDGEVNGALHEGKADAEE 364 (722)
Q Consensus 341 ~D~D~~~~~d~iG~v~~~~~~~~~ 364 (722)
||+|++++++++|++.+...+.+-
T Consensus 91 ~d~d~~~~d~~lG~~~i~L~~l~~ 114 (128)
T cd08388 91 LSFDRYSRDDVIGEVVCPLAGADL 114 (128)
T ss_pred EEcCCCCCCceeEEEEEeccccCC
Confidence 999999999999999988765533
No 447
>cd08521 C2A_SLP C2 domain first repeat present in Synaptotagmin-like proteins. All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. Slp1/JFC1 and Slp2/exophilin 4 promote granule docking to the plasma membrane. Additionally, their C2A domains are both Ca2+ independent, unlike the case in Slp3 and Slp4/granuphilin in which their C2A domains are Ca2+ dependent. It is thought that SHD (except for the Slp4-SHD) functions as a specific Rab27A/B-binding domain. In addition to Slps, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. It has been demonstrated that Slp3 and Slp4/granuphilin promote dense-core vesicle exocytosis. Slp5 mRNA has been shown to be restricted to human placenta and liver suggesting a role in Rab27A-dependent membrane trafficking in specific tissues. C2 domains fold into
Probab=99.60 E-value=7.3e-16 Score=142.86 Aligned_cols=98 Identities=11% Similarity=0.033 Sum_probs=88.0
Q ss_pred ccceeEEEEeec-CCcccc-CCCCCCcceEEEecCCCCCcccceeeecccCCCcceeeeeecccccccCcc-cccccccc
Q 004954 264 NNDYGYLSSKEA-DLIDLQ-HNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPAE 340 (722)
Q Consensus 264 s~~~l~v~l~e~-~L~~~d-~~g~sDpyvk~~l~~d~~~~~k~kt~~~k~tlnP~~nE~f~f~~~v~~~~~-~~~L~~~V 340 (722)
..+.|+|.|.+| ||+++| ..|.+|||||++++|++....++||+++++++||+|||+|.|. ++...+ .+.|.+.|
T Consensus 12 ~~~~L~V~v~~a~~L~~~~~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~~P~wne~f~f~--i~~~~l~~~~l~i~v 89 (123)
T cd08521 12 KTGSLEVHIKECRNLAYADEKKKRSNPYVKVYLLPDKSKQSKRKTSVKKNTTNPVFNETLKYH--ISKSQLETRTLQLSV 89 (123)
T ss_pred CCCEEEEEEEEecCCCCcCCCCCCCCcEEEEEEecCCCcCceeeccccCCCCCCcccceEEEe--CCHHHhCCCEEEEEE
Confidence 567899999999 999999 8899999999999998876678999999999999999999999 887666 55699999
Q ss_pred cccCCCCCCccccccccCccccc
Q 004954 341 IDNSDTRDGEVNGALHEGKADAE 363 (722)
Q Consensus 341 ~D~D~~~~~d~iG~v~~~~~~~~ 363 (722)
||++.+++++++|++.++..+..
T Consensus 90 ~d~~~~~~~~~iG~~~i~l~~l~ 112 (123)
T cd08521 90 WHHDRFGRNTFLGEVEIPLDSWD 112 (123)
T ss_pred EeCCCCcCCceeeEEEEeccccc
Confidence 99999999999999999876663
No 448
>cd08387 C2A_Synaptotagmin-8 C2A domain first repeat present in Synaptotagmin 8. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involv
Probab=99.60 E-value=6.6e-16 Score=143.68 Aligned_cols=97 Identities=13% Similarity=0.071 Sum_probs=86.5
Q ss_pred ccceeEEEEeec-CCccccCCCCCCcceEEEecCCCCCcccceeeecccCCCcceeeeeecccccccCcc-ccccccccc
Q 004954 264 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPAEI 341 (722)
Q Consensus 264 s~~~l~v~l~e~-~L~~~d~~g~sDpyvk~~l~~d~~~~~k~kt~~~k~tlnP~~nE~f~f~~~v~~~~~-~~~L~~~V~ 341 (722)
..+.|+|.|.+| ||+++|.+|.+||||++++.|++. .++||+++++++||+|||+|.|. ++...+ +..|.++||
T Consensus 14 ~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~--~~~kT~v~~~t~~P~wne~f~f~--v~~~~l~~~~l~i~V~ 89 (124)
T cd08387 14 DMGILNVKLIQARNLQPRDFSGTADPYCKVRLLPDRS--NTKQSKIHKKTLNPEFDESFVFE--VPPQELPKRTLEVLLY 89 (124)
T ss_pred CCCEEEEEEEEeeCCCCCCCCCCCCCeEEEEEecCCC--CcEeCceEcCCCCCCcccEEEEe--CCHHHhCCCEEEEEEE
Confidence 456899999999 999999999999999999988765 36789999999999999999998 887666 556999999
Q ss_pred ccCCCCCCccccccccCcccccc
Q 004954 342 DNSDTRDGEVNGALHEGKADAEE 364 (722)
Q Consensus 342 D~D~~~~~d~iG~v~~~~~~~~~ 364 (722)
|++.+++++++|.+.++..+...
T Consensus 90 d~~~~~~~~~iG~~~i~l~~~~~ 112 (124)
T cd08387 90 DFDQFSRDECIGVVELPLAEVDL 112 (124)
T ss_pred ECCCCCCCceeEEEEEecccccC
Confidence 99999999999999998877764
No 449
>cd08389 C2A_Synaptotagmin-14_16 C2A domain first repeat present in Synaptotagmins 14 and 16. Synaptotagmin 14 and 16 are membrane-trafficking proteins in specific tissues outside the brain. Both of these contain C-terminal tandem C2 repeats, but only Synaptotagmin 14 has an N-terminal transmembrane domain and a putative fatty-acylation site. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium and this is indeed the case here. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicle
Probab=99.60 E-value=7.9e-16 Score=143.41 Aligned_cols=98 Identities=10% Similarity=-0.026 Sum_probs=85.6
Q ss_pred ccceeEEEEeec-CCccccCCCCCCcceEEEecCCCCCcccceeeecccCCCcceeeeeecccccccCcc-ccccccccc
Q 004954 264 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPAEI 341 (722)
Q Consensus 264 s~~~l~v~l~e~-~L~~~d~~g~sDpyvk~~l~~d~~~~~k~kt~~~k~tlnP~~nE~f~f~~~v~~~~~-~~~L~~~V~ 341 (722)
....|+|+|++| ||+++|.+|.+|||||+.++|+++ .++||+++++ +||+|||+|.|.. ++.+.+ +++|.+.||
T Consensus 14 ~~~~L~V~Vi~a~nL~~~~~~~~~d~yVk~~llp~~~--~~~kTkv~~~-~nP~fnE~F~f~~-i~~~~l~~~~L~~~V~ 89 (124)
T cd08389 14 SARKLTVTVIRAQDIPTKDRGGASSWQVHLVLLPSKK--QRAKTKVQRG-PNPVFNETFTFSR-VEPEELNNMALRFRLY 89 (124)
T ss_pred CCCEEEEEEEEecCCCchhcCCCCCcEEEEEEccCCc--ceeecccccC-CCCcccCEEEECC-CCHHHhccCEEEEEEE
Confidence 457899999999 999999999999999999999865 4788998887 9999999999973 555555 677999999
Q ss_pred ccCCCCCCccccccccCccccccc
Q 004954 342 DNSDTRDGEVNGALHEGKADAEEH 365 (722)
Q Consensus 342 D~D~~~~~d~iG~v~~~~~~~~~e 365 (722)
|++++++++++|++.++......+
T Consensus 90 ~~~~~~~~~~lG~~~i~L~~l~~~ 113 (124)
T cd08389 90 GVERMRKERLIGEKVVPLSQLNLE 113 (124)
T ss_pred ECCCcccCceEEEEEEeccccCCC
Confidence 999999999999999988766443
No 450
>cd04010 C2B_RasA3 C2 domain second repeat present in RAS p21 protein activator 3 (RasA3). RasA3 are members of GTPase activating protein 1 (GAP1), a Ras-specific GAP, which suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. RasA3 contains an N-terminal C2 domain, a Ras-GAP domain, a plextrin homology (PH)-like domain, and a Bruton's Tyrosine Kinase (BTK) zinc binding domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain
Probab=99.59 E-value=1.1e-15 Score=146.55 Aligned_cols=97 Identities=13% Similarity=0.009 Sum_probs=82.9
Q ss_pred eeEEEEeec-CCccccCCCCCCcceEEEecCCCCCcccceeeecccCCCcceeeeeecccc-----------cccCcc-c
Q 004954 267 YGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSD-----------LHFKGA-E 333 (722)
Q Consensus 267 ~l~v~l~e~-~L~~~d~~g~sDpyvk~~l~~d~~~~~k~kt~~~k~tlnP~~nE~f~f~~~-----------v~~~~~-~ 333 (722)
+|+|.|.+| ||.+ .+|.+||||++++.+++++..+++|+++++|+||+|||+|.|... ++.+.. .
T Consensus 1 kL~V~Vi~ArnL~~--~~g~sDPYV~V~l~~~~~k~~~~kT~v~~~t~nP~wNE~F~F~v~~~~~~~~~~~~~~~~~~~~ 78 (148)
T cd04010 1 KLSVRVIECSDLAL--KNGTCDPYASVTLIYSNKKQDTKRTKVKKKTNNPQFDEAFYFDVTIDSSPEKKQFEMPEEDAEK 78 (148)
T ss_pred CEEEEEEeCcCCCC--CCCCCCceEEEEEeCCcccCcccCCccEeCCCCCccceEEEEEEecccccccccccCCcccccE
Confidence 589999999 9998 789999999999999877777899999999999999999999921 133444 3
Q ss_pred ccccccccccCCCCCCccccccccCccccccc
Q 004954 334 KDLMPAEIDNSDTRDGEVNGALHEGKADAEEH 365 (722)
Q Consensus 334 ~~L~~~V~D~D~~~~~d~iG~v~~~~~~~~~e 365 (722)
..|.+.|||.+.+++++++|++.+....+...
T Consensus 79 ~~L~i~V~d~~~~~~ddfLG~v~i~l~~l~~~ 110 (148)
T cd04010 79 LELRVDLWHASMGGGDVFLGEVRIPLRGLDLQ 110 (148)
T ss_pred EEEEEEEEcCCCCCCCceeEEEEEeccccccc
Confidence 55999999999999999999999987766554
No 451
>cd04030 C2C_KIAA1228 C2 domain third repeat present in uncharacterized human KIAA1228-like proteins. KIAA proteins are uncharacterized human proteins. They were compiled by the Kazusa mammalian cDNA project which identified more than 2000 human genes. They are identified by 4 digit codes that precede the KIAA designation. Many KIAA genes are still functionally uncharacterized including KIAA1228. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1
Probab=99.59 E-value=1.1e-15 Score=142.61 Aligned_cols=99 Identities=13% Similarity=0.101 Sum_probs=88.3
Q ss_pred ccceeEEEEeec-CCccccCCCCCCcceEEEecCCCCCcccceeeecccCCCcceeeeeecccccccCcc-ccccccccc
Q 004954 264 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPAEI 341 (722)
Q Consensus 264 s~~~l~v~l~e~-~L~~~d~~g~sDpyvk~~l~~d~~~~~k~kt~~~k~tlnP~~nE~f~f~~~v~~~~~-~~~L~~~V~ 341 (722)
..+.|+|.|++| ||+++|.+|.+|||||++++++++...++||+++++++||+|||+|.|. ++...+ +..|.++||
T Consensus 14 ~~~~L~V~vi~a~~L~~~~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~~~nP~wne~f~f~--i~~~~l~~~~l~i~v~ 91 (127)
T cd04030 14 QRQKLIVTVHKCRNLPPCDSSDIPDPYVRLYLLPDKSKSTRRKTSVKKDNLNPVFDETFEFP--VSLEELKRRTLDVAVK 91 (127)
T ss_pred CCCEEEEEEEEEECCCCccCCCCCCceEEEEEEcCCCCCceEecccccCCCCCEECeEEEEe--cCHHHhcCCEEEEEEE
Confidence 457899999999 9999999999999999999998877788999999999999999999999 877666 456999999
Q ss_pred ccCCC--CCCccccccccCcccccc
Q 004954 342 DNSDT--RDGEVNGALHEGKADAEE 364 (722)
Q Consensus 342 D~D~~--~~~d~iG~v~~~~~~~~~ 364 (722)
|.+.+ ++++++|.+.++..+...
T Consensus 92 ~~~~~~~~~~~~iG~~~i~l~~l~~ 116 (127)
T cd04030 92 NSKSFLSREKKLLGQVLIDLSDLDL 116 (127)
T ss_pred ECCcccCCCCceEEEEEEecccccc
Confidence 99986 679999999998877644
No 452
>cd04031 C2A_RIM1alpha C2 domain first repeat contained in Rab3-interacting molecule (RIM) proteins. RIMs are believed to organize specialized sites of the plasma membrane called active zones. They also play a role in controlling neurotransmitter release, plasticity processes, as well as memory and learning. RIM contains an N-terminal zinc finger domain, a PDZ domain, and two C-terminal C2 domains (C2A, C2B). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as
Probab=99.59 E-value=1.4e-15 Score=141.37 Aligned_cols=98 Identities=16% Similarity=0.173 Sum_probs=85.2
Q ss_pred ccceeEEEEeec-CCccccCCCCCCcceEEEecCCCCCcccceeeecccCCCcceeeeeecccccccCcc-ccccccccc
Q 004954 264 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPAEI 341 (722)
Q Consensus 264 s~~~l~v~l~e~-~L~~~d~~g~sDpyvk~~l~~d~~~~~k~kt~~~k~tlnP~~nE~f~f~~~v~~~~~-~~~L~~~V~ 341 (722)
..+.|+|.|++| ||+++|.+|.+||||++++.++.....++||+++++|+||+|||+|.|.. ++.+.. +..|.++||
T Consensus 14 ~~~~L~V~vi~a~~L~~~~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~-~~~~~l~~~~l~~~V~ 92 (125)
T cd04031 14 VTSQLIVTVLQARDLPPRDDGSLRNPYVKVYLLPDRSEKSKRRTKTVKKTLNPEWNQTFEYSN-VRRETLKERTLEVTVW 92 (125)
T ss_pred CCCEEEEEEEEecCCCCcCCCCCCCCEEEEEEccCCCccccccccccCCCCCCccccEEEEcc-cCHHHhCCCEEEEEEE
Confidence 457899999999 99999999999999999999987766788999999999999999999982 233334 556999999
Q ss_pred ccCCCCCCccccccccCcccc
Q 004954 342 DNSDTRDGEVNGALHEGKADA 362 (722)
Q Consensus 342 D~D~~~~~d~iG~v~~~~~~~ 362 (722)
|++.+++++++|.+.++..+.
T Consensus 93 d~~~~~~~~~iG~~~i~l~~~ 113 (125)
T cd04031 93 DYDRDGENDFLGEVVIDLADA 113 (125)
T ss_pred eCCCCCCCcEeeEEEEecccc
Confidence 999999999999999987663
No 453
>cd08405 C2B_Synaptotagmin-7 C2 domain second repeat present in Synaptotagmin 7. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 7, a member of class 2 synaptotagmins, is located in presynaptic plasma membranes in neurons, dense-core vesicles in endocrine cells, and lysosomes in fibroblasts. It has been shown to play a role in regulation of Ca2+-dependent lysosomal exocytosis in fibroblasts and may also function as a vesicular Ca2+-sensor. It is distinguished from the other synaptotagmins by having over 12 splice forms. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic ves
Probab=99.59 E-value=5.7e-16 Score=146.58 Aligned_cols=97 Identities=14% Similarity=0.091 Sum_probs=86.7
Q ss_pred ccceeEEEEeec-CCccccCCCCCCcceEEEecCCCCCcccceeeecccCCCcceeeeeecccccccCcc-ccccccccc
Q 004954 264 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPAEI 341 (722)
Q Consensus 264 s~~~l~v~l~e~-~L~~~d~~g~sDpyvk~~l~~d~~~~~k~kt~~~k~tlnP~~nE~f~f~~~v~~~~~-~~~L~~~V~ 341 (722)
..+.|+|.|.+| ||+++|.+|.+|||||+++.+..++..++||+++++++||+|||+|.|. ++.+.. +..|.++||
T Consensus 13 ~~~~L~v~vi~a~~L~~~~~~g~~dpyV~v~l~~~~~~~~~~kT~v~~~t~~P~wne~F~f~--i~~~~~~~~~l~~~v~ 90 (136)
T cd08405 13 TANRITVNIIKARNLKAMDINGTSDPYVKVWLMYKDKRVEKKKTVIKKRTLNPVFNESFIFN--IPLERLRETTLIITVM 90 (136)
T ss_pred CCCeEEEEEEEeeCCCccccCCCCCceEEEEEEeCCCccccccCcceeCCCCCcccceEEEe--CCHHHhCCCEEEEEEE
Confidence 446799999999 9999999999999999999987666668899999999999999999999 777666 456999999
Q ss_pred ccCCCCCCccccccccCcccc
Q 004954 342 DNSDTRDGEVNGALHEGKADA 362 (722)
Q Consensus 342 D~D~~~~~d~iG~v~~~~~~~ 362 (722)
|++.+++++++|++.++..+.
T Consensus 91 d~~~~~~~~~lG~~~i~~~~~ 111 (136)
T cd08405 91 DKDRLSRNDLIGKIYLGWKSG 111 (136)
T ss_pred ECCCCCCCcEeEEEEECCccC
Confidence 999999999999999987654
No 454
>cd08385 C2A_Synaptotagmin-1-5-6-9-10 C2A domain first repeat present in Synaptotagmins 1, 5, 6, 9, and 10. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 1, a member of class 1 synaptotagmins, is located in the brain and endocranium and localized to the synaptic vesicles and secretory granules. It functions as a Ca2+ sensor for fast exocytosis as do synaptotagmins 5, 6, and 10. It is distinguished from the other synaptotagmins by having an N-glycosylated N-terminus. Synaptotagmins 5, 6, and 10, members of class 3 synaptotagmins, are located primarily in the brain and localized to the active zone and plasma membrane. They is distinguished from the other synaptotagmins by having disulfide bonds at its N-terminus. Synaptotagmin 6 also regulates the acrosome reaction, a unique Ca2+-regulated exocytosis, in sperm. Synaptotagmin 9, a class 5 synaptotagmins, is located in the brain and
Probab=99.59 E-value=1.2e-15 Score=141.89 Aligned_cols=97 Identities=13% Similarity=0.089 Sum_probs=85.9
Q ss_pred ccceeEEEEeec-CCccccCCCCCCcceEEEecCCCCCcccceeeecccCCCcceeeeeecccccccCcc-ccccccccc
Q 004954 264 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPAEI 341 (722)
Q Consensus 264 s~~~l~v~l~e~-~L~~~d~~g~sDpyvk~~l~~d~~~~~k~kt~~~k~tlnP~~nE~f~f~~~v~~~~~-~~~L~~~V~ 341 (722)
..+.|+|.|.+| ||+++|.+|.+||||++++.|+++ ++++|+++++++||+|||+|.|. ++...+ +..|.++||
T Consensus 14 ~~~~L~V~v~~a~~L~~~d~~~~~dpyv~v~l~~~~~--~~~kT~v~~~t~nP~wne~f~f~--i~~~~l~~~~l~~~V~ 89 (124)
T cd08385 14 QSNQLTVGIIQAADLPAMDMGGTSDPYVKVYLLPDKK--KKFETKVHRKTLNPVFNETFTFK--VPYSELGNKTLVFSVY 89 (124)
T ss_pred CCCEEEEEEEEeeCCCCccCCCCCCCEEEEEEEcCCC--CceecccCcCCCCCceeeeEEEe--CCHHHhCCCEEEEEEE
Confidence 457899999999 999999999999999999998765 37899999999999999999999 776555 456999999
Q ss_pred ccCCCCCCccccccccCcccccc
Q 004954 342 DNSDTRDGEVNGALHEGKADAEE 364 (722)
Q Consensus 342 D~D~~~~~d~iG~v~~~~~~~~~ 364 (722)
|+|++++++++|++.+...+...
T Consensus 90 d~d~~~~~~~lG~~~i~l~~~~~ 112 (124)
T cd08385 90 DFDRFSKHDLIGEVRVPLLTVDL 112 (124)
T ss_pred eCCCCCCCceeEEEEEecCcccC
Confidence 99999999999999998876644
No 455
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.59 E-value=1.8e-14 Score=145.57 Aligned_cols=132 Identities=21% Similarity=0.301 Sum_probs=102.6
Q ss_pred EEeccCCCCceEEEEECCCCcEEEEEEeecchh---------hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCe
Q 004954 420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---------FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 490 (722)
Q Consensus 420 ~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~---------~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~ 490 (722)
+.||+|++|.||+|.+ .|..+++|+...... ......+|..++..+.+ ++|+....++.....
T Consensus 2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~------~~i~~p~~~~~~~~~ 73 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARK------AGVNVPAVYFVDPEN 73 (211)
T ss_pred cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHH------CCCCCCeEEEEeCCC
Confidence 5799999999999986 778899998653211 12346678888888864 355555555666778
Q ss_pred EEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCC
Q 004954 491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS 569 (722)
Q Consensus 491 l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGl 569 (722)
.++||||++| +|.+.+.. ... .+..++.+++.+|.+||+.|++|+|++|.|||++ .+.++|+|||.
T Consensus 74 ~~lv~e~~~G~~L~~~~~~---------~~~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~---~~~~~liDf~~ 140 (211)
T PRK14879 74 FIIVMEYIEGEPLKDLINS---------NGM-EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS---GGKIYLIDFGL 140 (211)
T ss_pred CEEEEEEeCCcCHHHHHHh---------ccH-HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE---CCCEEEEECCc
Confidence 8999999987 55555432 112 7788999999999999999999999999999998 57799999999
Q ss_pred ccc
Q 004954 570 SCF 572 (722)
Q Consensus 570 s~~ 572 (722)
+..
T Consensus 141 a~~ 143 (211)
T PRK14879 141 AEF 143 (211)
T ss_pred ccC
Confidence 865
No 456
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.59 E-value=9.4e-16 Score=168.27 Aligned_cols=177 Identities=33% Similarity=0.441 Sum_probs=129.3
Q ss_pred CeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEec
Q 004954 489 EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDL 567 (722)
Q Consensus 489 ~~l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DF 567 (722)
.+++|.|++|.- +|.+.+..... ... .++...+.++.|++.|+.| +|.+|+|+||.||.... ++++||.||
T Consensus 329 ~~lyI~Mn~c~~~tledWl~rr~~-~e~--~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~--d~q~kIgDF 400 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRRRRT-GEE--RSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSD--DDQLKIGDF 400 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhCCCc-ccc--cchhHHHHHHHhhccchhh---ccchhhhcccccccccc--chhhhhhhh
Confidence 468999999984 66666653332 222 6777889999999999999 99999999999999985 778999999
Q ss_pred CCcccccCCc---------cccccCCcccCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCChHHHHHHHHHhhcC
Q 004954 568 GSSCFQTDNL---------CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLG 637 (722)
Q Consensus 568 Gls~~~~~~~---------~~~~gt~~y~APE~l~~~~~s~ksDIWSLGviL~ellt-G~~PF~~~~~~e~l~~i~~~lg 637 (722)
|+........ +..+||..||+||.+.+..|+.++||||||+||+|++. =..+|. ....+...
T Consensus 401 gl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~e------r~~t~~d~-- 472 (516)
T KOG1033|consen 401 GLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFE------RIATLTDI-- 472 (516)
T ss_pred hheeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHH------HHHhhhhh--
Confidence 9876544332 34688999999999999999999999999999999997 122221 11111000
Q ss_pred CCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCC
Q 004954 638 PIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPW 717 (722)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPw 717 (722)
. ...+|+... ...+.-.+||.+||...|.+||++.+.--|+|
T Consensus 473 -------r-------------------------~g~ip~~~~------~d~p~e~~ll~~lls~~p~~RP~~~~~~~~~~ 514 (516)
T KOG1033|consen 473 -------R-------------------------DGIIPPEFL------QDYPEEYTLLQQLLSPSPEERPSAIEVALHEF 514 (516)
T ss_pred -------h-------------------------cCCCChHHh------hcCcHHHHHHHHhcCCCcccCchHHHHhhhhh
Confidence 0 001111100 11122348999999999999999999999998
Q ss_pred CC
Q 004954 718 LQ 719 (722)
Q Consensus 718 f~ 719 (722)
++
T Consensus 515 ~~ 516 (516)
T KOG1033|consen 515 LQ 516 (516)
T ss_pred cC
Confidence 75
No 457
>KOG1028 consensus Ca2+-dependent phospholipid-binding protein Synaptotagmin, required for synaptic vesicle and secretory granule exocytosis [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.58 E-value=6e-16 Score=172.08 Aligned_cols=96 Identities=13% Similarity=0.018 Sum_probs=90.7
Q ss_pred ccceeEEEEeec-CCccccCCCCCCcceEEEecCCCCCcccceeeecccCCCcceeeeeecccccccCccccc-cccccc
Q 004954 264 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAEKD-LMPAEI 341 (722)
Q Consensus 264 s~~~l~v~l~e~-~L~~~d~~g~sDpyvk~~l~~d~~~~~k~kt~~~k~tlnP~~nE~f~f~~~v~~~~~~~~-L~~~V~ 341 (722)
.+++|+|+|++| ||++||.+|.+|||||++++++.++.+|+||.++|+++||+|||+|.|. ++.+.++++ |.++||
T Consensus 296 ~~g~ltv~v~kar~L~~~~~~~~~d~~Vk~~l~~~~~~~~kkkT~~~~~~~npv~nesf~F~--vp~~~l~~~~l~l~V~ 373 (421)
T KOG1028|consen 296 TAGRLTVVVIKARNLKSMDVGGLSDPYVKVTLLDGDKRLSKKKTSVKKKTLNPVFNETFVFD--VPPEQLAEVSLELTVW 373 (421)
T ss_pred CCCeEEEEEEEecCCCcccCCCCCCccEEEEEecCCceeeeeeeecccCCCCCcccccEEEe--CCHHHhheeEEEEEEE
Confidence 678999999999 9999999999999999999999999999999999999999999999998 999998665 999999
Q ss_pred ccCCCCCCccccccccCccc
Q 004954 342 DNSDTRDGEVNGALHEGKAD 361 (722)
Q Consensus 342 D~D~~~~~d~iG~v~~~~~~ 361 (722)
|+|++++++++|.+.++...
T Consensus 374 d~d~~~~~~~iG~~~lG~~~ 393 (421)
T KOG1028|consen 374 DHDTLGSNDLIGRCILGSDS 393 (421)
T ss_pred EcccccccceeeEEEecCCC
Confidence 99999999999999888654
No 458
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.57 E-value=1.9e-14 Score=144.65 Aligned_cols=138 Identities=22% Similarity=0.216 Sum_probs=102.7
Q ss_pred EEEEEEeccCCCCceEEEEECCCCcEEEEEEeecchhh-----------------------hHhHHHHHHHHHHhcccCC
Q 004954 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF-----------------------FDQSLDEIKLLKLVNKNDP 472 (722)
Q Consensus 416 Y~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~~-----------------------~~~~~~E~~il~~L~~~~~ 472 (722)
|.+.+.||+|+||.||++.+ .+|+.+|||+++..... ......|..++..+.+..
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~- 94 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALD-PDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEG- 94 (198)
T ss_pred hhcCCccccCcceEEEEEEc-CCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcC-
Confidence 78889999999999999986 48999999987653210 112456777777776532
Q ss_pred CCCCceeEEEEEEEecCeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCce
Q 004954 473 ADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENI 552 (722)
Q Consensus 473 ~~hpnIv~l~~~f~~~~~l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NI 552 (722)
..++..++. ...++||||+.|..+..+.. ......++.+++.++.++|+.||+|+||||+||
T Consensus 95 ---i~v~~~~~~----~~~~lv~e~~~g~~L~~~~~-----------~~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Ni 156 (198)
T cd05144 95 ---FPVPKPIDW----NRHAVVMEYIDGVELYRVRV-----------LEDPEEVLDEILEEIVKAYKHGIIHGDLSEFNI 156 (198)
T ss_pred ---CCCCceeec----CCceEEEEEeCCcchhhccc-----------cccHHHHHHHHHHHHHHHHHCCCCcCCCCcccE
Confidence 134444442 44589999998754432211 134567889999999999999999999999999
Q ss_pred EEcccCCCeEEEEecCCcccccC
Q 004954 553 LIKSYQRCEIKIIDLGSSCFQTD 575 (722)
Q Consensus 553 Ll~~~~~~~vkL~DFGls~~~~~ 575 (722)
+++. ++.++|+|||.+.....
T Consensus 157 ll~~--~~~~~liDfg~~~~~~~ 177 (198)
T cd05144 157 LVDD--DEKIYIIDWPQMVSTDH 177 (198)
T ss_pred EEcC--CCcEEEEECCccccCCC
Confidence 9985 78999999999855443
No 459
>cd04041 C2A_fungal C2 domain first repeat; fungal group. C2 domains were first identified in Protein Kinase C (PKC). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligan
Probab=99.55 E-value=5.1e-15 Score=135.15 Aligned_cols=95 Identities=13% Similarity=0.017 Sum_probs=81.4
Q ss_pred ceeEEEEeec-CCccccCC-CCCCcceEEEecCCCCCcccceeeecccCCCcceeeeeecccccccCcc--ccccccccc
Q 004954 266 DYGYLSSKEA-DLIDLQHN-VVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA--EKDLMPAEI 341 (722)
Q Consensus 266 ~~l~v~l~e~-~L~~~d~~-g~sDpyvk~~l~~d~~~~~k~kt~~~k~tlnP~~nE~f~f~~~v~~~~~--~~~L~~~V~ 341 (722)
+.|+|.|.+| ||+++|.. |.+||||++++.++++ .+++|+++++|+||+|||+|.|. +...+. +..|.++||
T Consensus 1 G~L~V~v~~a~~L~~~d~~~~~~Dpyv~v~~~~~~~--~~~kT~v~~~t~nP~Wne~f~f~--~~~~~~~~~~~l~~~V~ 76 (111)
T cd04041 1 GVLVVTIHRATDLPKADFGTGSSDPYVTASFAKFGK--PLYSTRIIRKDLNPVWEETWFVL--VTPDEVKAGERLSCRLW 76 (111)
T ss_pred CEEEEEEEEeeCCCcccCCCCCCCccEEEEEccCCC--ccEeeeeECCCCCCccceeEEEE--eCchhccCCCEEEEEEE
Confidence 3689999999 99999998 9999999999987653 46789999999999999999998 544332 456999999
Q ss_pred ccCCCCCCccccccccCcccccc
Q 004954 342 DNSDTRDGEVNGALHEGKADAEE 364 (722)
Q Consensus 342 D~D~~~~~d~iG~v~~~~~~~~~ 364 (722)
|+|++++++++|.+.+...+..+
T Consensus 77 d~d~~~~dd~lG~~~i~l~~l~~ 99 (111)
T cd04041 77 DSDRFTADDRLGRVEIDLKELIE 99 (111)
T ss_pred eCCCCCCCCcceEEEEEHHHHhc
Confidence 99999999999999998766653
No 460
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.54 E-value=6.3e-14 Score=140.36 Aligned_cols=128 Identities=20% Similarity=0.266 Sum_probs=96.0
Q ss_pred EeccCCCCceEEEEECCCCcEEEEEEeecch---------hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 004954 421 YLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---------DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (722)
Q Consensus 421 ~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~---------~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (722)
.||+|+||.||++. ..|..+++|+..... ....+..+|.++++.+.+.. -+++.++ +......
T Consensus 1 ~ig~G~~~~vy~~~--~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~----i~~p~~~--~~~~~~~ 72 (199)
T TIGR03724 1 LIAKGAEAIIYLGD--FLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAG----VNTPVVY--DVDPDNK 72 (199)
T ss_pred CCCCCceEEEEEee--cCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCC----CCCCEEE--EEECCCC
Confidence 38999999999998 467889999865321 01245667999999887542 1233343 3455667
Q ss_pred EEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeEEEEecCCc
Q 004954 492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (722)
Q Consensus 492 ~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~vkL~DFGls 570 (722)
++||||++| ++.+.+.... . .++.|++.+|.+||+.|++|+|++|.||+++ ++.++|+|||++
T Consensus 73 ~lv~e~~~g~~l~~~~~~~~-------~------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~---~~~~~liDfg~a 136 (199)
T TIGR03724 73 TIVMEYIEGKPLKDVIEEGN-------D------ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR---DDKLYLIDFGLG 136 (199)
T ss_pred EEEEEEECCccHHHHHhhcH-------H------HHHHHHHHHHHHHHHCCeecCCCCcceEEEE---CCcEEEEECCCC
Confidence 899999986 4544432110 0 7899999999999999999999999999998 678999999998
Q ss_pred cc
Q 004954 571 CF 572 (722)
Q Consensus 571 ~~ 572 (722)
..
T Consensus 137 ~~ 138 (199)
T TIGR03724 137 KY 138 (199)
T ss_pred cC
Confidence 65
No 461
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.53 E-value=4.7e-14 Score=139.75 Aligned_cols=139 Identities=22% Similarity=0.286 Sum_probs=96.7
Q ss_pred EEEeccCCCCceEEEEECCCCcEEEEEEeecchhhh---HhH----------------------HHHHHHHHHhcccCCC
Q 004954 419 TEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFF---DQS----------------------LDEIKLLKLVNKNDPA 473 (722)
Q Consensus 419 ~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~~~---~~~----------------------~~E~~il~~L~~~~~~ 473 (722)
.+.||+|+||+||+|.+. +|+.||||+++...... ... ..|...+..+....
T Consensus 2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~-- 78 (187)
T cd05119 2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAG-- 78 (187)
T ss_pred CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcC--
Confidence 467999999999999976 89999999987542111 111 24455555554321
Q ss_pred CCCceeEEEEEEEecCeEEEEEEccccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHH-CCCccccCCCCce
Q 004954 474 DEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS-LGIIHCDLKPENI 552 (722)
Q Consensus 474 ~hpnIv~l~~~f~~~~~l~iVmEy~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs-~gIvHrDLKp~NI 552 (722)
-.+++++++ ...++||||++++........... . ...++.++.+++.++.++|. .||+|+||||+||
T Consensus 79 --~~~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~-----~-~~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Ni 146 (187)
T cd05119 79 --VPVPKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR-----L-LEDPEELYDQILELMRKLYREAGLVHGDLSEYNI 146 (187)
T ss_pred --CCCCceEec----CCCEEEEEEeCCCCccChhhhhhh-----h-cccHHHHHHHHHHHHHHHhhccCcCcCCCChhhE
Confidence 234455543 346899999987321111100000 1 15678899999999999999 9999999999999
Q ss_pred EEcccCCCeEEEEecCCcccccC
Q 004954 553 LIKSYQRCEIKIIDLGSSCFQTD 575 (722)
Q Consensus 553 Ll~~~~~~~vkL~DFGls~~~~~ 575 (722)
+++ ++.++|+|||.+.....
T Consensus 147 li~---~~~~~liDfg~a~~~~~ 166 (187)
T cd05119 147 LVD---DGKVYIIDVPQAVEIDH 166 (187)
T ss_pred EEE---CCcEEEEECcccccccC
Confidence 998 67899999999865443
No 462
>cd08386 C2A_Synaptotagmin-7 C2A domain first repeat present in Synaptotagmin 7. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 7, a member of class 2 synaptotagmins, is located in presynaptic plasma membranes in neurons, dense-core vesicles in endocrine cells, and lysosomes in fibroblasts. It has been shown to play a role in regulation of Ca2+-dependent lysosomal exocytosis in fibroblasts and may also function as a vesicular Ca2+-sensor. It is distinguished from the other synaptotagmins by having over 12 splice forms. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic ves
Probab=99.53 E-value=9.8e-15 Score=135.83 Aligned_cols=98 Identities=12% Similarity=0.097 Sum_probs=84.3
Q ss_pred ccceeEEEEeec-CCccccCCCCCCcceEEEecCCCCCcccceeeecccCCCcceeeeeecccccccCcc-ccccccccc
Q 004954 264 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPAEI 341 (722)
Q Consensus 264 s~~~l~v~l~e~-~L~~~d~~g~sDpyvk~~l~~d~~~~~k~kt~~~k~tlnP~~nE~f~f~~~v~~~~~-~~~L~~~V~ 341 (722)
....|+|.|.+| ||+++|.+|.+||||++++++++.. +.+|+++++++||+|||+|.|.. ++.+.+ ++.|.++||
T Consensus 14 ~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~--~~kT~v~~~t~~P~Wne~f~f~~-~~~~~l~~~~l~~~v~ 90 (125)
T cd08386 14 QESTLTLKILKAVELPAKDFSGTSDPFVKIYLLPDKKH--KLETKVKRKNLNPHWNETFLFEG-FPYEKLQQRVLYLQVL 90 (125)
T ss_pred CCCEEEEEEEEecCCCCccCCCCCCceEEEEECCCCCc--ceeeeeecCCCCCccceeEEEcc-cCHHHhCCCEEEEEEE
Confidence 346899999999 9999999999999999999987553 67999999999999999999973 344444 566999999
Q ss_pred ccCCCCCCccccccccCcccccc
Q 004954 342 DNSDTRDGEVNGALHEGKADAEE 364 (722)
Q Consensus 342 D~D~~~~~d~iG~v~~~~~~~~~ 364 (722)
|+|++++++++|++.+...+...
T Consensus 91 d~d~~~~~~~iG~~~i~l~~l~~ 113 (125)
T cd08386 91 DYDRFSRNDPIGEVSLPLNKVDL 113 (125)
T ss_pred eCCCCcCCcEeeEEEEecccccC
Confidence 99999999999999998876654
No 463
>cd04009 C2B_Munc13-like C2 domain second repeat in Munc13 (mammalian uncoordinated)-like proteins. C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, s
Probab=99.52 E-value=1e-14 Score=137.62 Aligned_cols=99 Identities=14% Similarity=0.045 Sum_probs=85.0
Q ss_pred ccceeEEEEeec-CCccccCCCCCCcceEEEecCCCC--CcccceeeecccCCCcceeeeeecccccccCc---cccccc
Q 004954 264 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPG--TEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKG---AEKDLM 337 (722)
Q Consensus 264 s~~~l~v~l~e~-~L~~~d~~g~sDpyvk~~l~~d~~--~~~k~kt~~~k~tlnP~~nE~f~f~~~v~~~~---~~~~L~ 337 (722)
....|+|.|.+| +|+++|.+|.+||||++++.++.+ ...++||+++++|+||+|||+|.|. +.... .+..|.
T Consensus 14 ~~~~L~V~Vi~A~~L~~~~~~g~~dPyv~v~l~~~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~--i~~~~~~~~~~~l~ 91 (133)
T cd04009 14 SEQSLRVEILNARNLLPLDSNGSSDPFVKVELLPRHLFPDVPTPKTQVKKKTLFPLFDESFEFN--VPPEQCSVEGALLL 91 (133)
T ss_pred CCCEEEEEEEEeeCCCCcCCCCCCCCEEEEEEECCCcCccccccccccCcCCCCCccCCEEEEE--echhhcccCCCEEE
Confidence 346899999999 999999999999999999998764 3568899999999999999999999 65432 245699
Q ss_pred ccccccCCCCCCccccccccCcccccc
Q 004954 338 PAEIDNSDTRDGEVNGALHEGKADAEE 364 (722)
Q Consensus 338 ~~V~D~D~~~~~d~iG~v~~~~~~~~~ 364 (722)
++|||++++++++++|++.+...+..+
T Consensus 92 ~~V~d~d~~~~d~~iG~~~i~l~~l~~ 118 (133)
T cd04009 92 FTVKDYDLLGSNDFEGEAFLPLNDIPG 118 (133)
T ss_pred EEEEecCCCCCCcEeEEEEEeHHHCCc
Confidence 999999999999999999998765553
No 464
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.52 E-value=4.7e-14 Score=157.41 Aligned_cols=197 Identities=21% Similarity=0.250 Sum_probs=145.1
Q ss_pred CCCCceeEEEEEEEecCeEEEEEEccc-cchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCC-ccccCCCC
Q 004954 473 ADEHHILRLYDYFYHLEHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGI-IHCDLKPE 550 (722)
Q Consensus 473 ~~hpnIv~l~~~f~~~~~l~iVmEy~~-gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gI-vHrDLKp~ 550 (722)
..|.|+.++++.+......++|.+||. |+|.+.+..... .+.......+++.|+.||+|||..-| .|+.+++.
T Consensus 4 l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~-----~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~ 78 (484)
T KOG1023|consen 4 LDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDI-----KLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSS 78 (484)
T ss_pred cchhhhhhheeeEecCCceEEEEeeecCccHHhHHhcccc-----CccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccc
Confidence 468899999999999999999999997 788888775322 26677778899999999999998765 99999999
Q ss_pred ceEEcccCCCeEEEEecCCcccccCCcc-----ccccCCcccCchhhcCCC-------CCchhhHHHHHHHHHHHHhCCC
Q 004954 551 NILIKSYQRCEIKIIDLGSSCFQTDNLC-----LYVQSRSYRAPEVIIGLP-------YDQKIDLWSLGCILAELWTGEV 618 (722)
Q Consensus 551 NILl~~~~~~~vkL~DFGls~~~~~~~~-----~~~gt~~y~APE~l~~~~-------~s~ksDIWSLGviL~elltG~~ 618 (722)
|++++. ...+||+|||+......... ......-|.|||.+.+.. .+.+.||||+|++++||++...
T Consensus 79 nClvd~--~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~ 156 (484)
T KOG1023|consen 79 NCLVDS--RWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSG 156 (484)
T ss_pred cceeee--eEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccC
Confidence 999996 89999999999876643111 111234499999997642 3567999999999999999999
Q ss_pred CCCCCh----HHHHHHHHHhhcCCCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHH
Q 004954 619 LFPNDA----VVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDF 694 (722)
Q Consensus 619 PF~~~~----~~e~l~~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dL 694 (722)
||.... +.+++..+.+ .+. ....|...... ...+++..+
T Consensus 157 ~~~~~~~~~~~~eii~~~~~-~~~--------------------------------~~~rP~i~~~~----e~~~~l~~l 199 (484)
T KOG1023|consen 157 PFDLRNLVEDPDEIILRVKK-GGS--------------------------------NPFRPSIELLN----ELPPELLLL 199 (484)
T ss_pred ccccccccCChHHHHHHHHh-cCC--------------------------------CCcCcchhhhh----hcchHHHHH
Confidence 996522 2233333221 000 00111111110 122468899
Q ss_pred HHHhcccCCCCCcCHHHHH
Q 004954 695 VRTLLEINPQRRPTAREAL 713 (722)
Q Consensus 695 L~~mL~~dP~kRpTa~ElL 713 (722)
++.||..+|.+||+++++-
T Consensus 200 ~~~cw~e~P~~rPs~~~i~ 218 (484)
T KOG1023|consen 200 VARCWEEIPEKRPSIEQIR 218 (484)
T ss_pred HHHhcccChhhCccHHHHH
Confidence 9999999999999998874
No 465
>cd04039 C2_PSD C2 domain present in Phosphatidylserine decarboxylase (PSD). PSD is involved in the biosynthesis of aminophospholipid by converting phosphatidylserine (PtdSer) to phosphatidylethanolamine (PtdEtn). There is a single C2 domain present and it is thought to confer PtdSer binding motif that is common to PKC and synaptotagmin. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM
Probab=99.52 E-value=1.2e-14 Score=132.12 Aligned_cols=92 Identities=10% Similarity=-0.044 Sum_probs=77.1
Q ss_pred ceeEEEEeec-CCccccCC----CCCCcceEEEecCCCCCcccceeeecccCCCcceeeeeecccccccCcccccccccc
Q 004954 266 DYGYLSSKEA-DLIDLQHN----VVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAEKDLMPAE 340 (722)
Q Consensus 266 ~~l~v~l~e~-~L~~~d~~----g~sDpyvk~~l~~d~~~~~k~kt~~~k~tlnP~~nE~f~f~~~v~~~~~~~~L~~~V 340 (722)
+.|.|.|++| ||+++|.. +.+||||++.+- .+++||+++++++||+|||.|.|. +.....+..|.+.|
T Consensus 1 g~l~v~v~~A~~L~~~~~~~~~~~~~DPYv~v~~~-----~~~~kT~v~~~t~nPvWne~f~f~--v~~~~~~~~L~~~V 73 (108)
T cd04039 1 GVVFMEIKSITDLPPLKNMTRTGFDMDPFVIISFG-----RRVFRTSWRRHTLNPVFNERLAFE--VYPHEKNFDIQFKV 73 (108)
T ss_pred CEEEEEEEeeeCCCCccccCCCCCccCceEEEEEC-----CEeEeeeeecCCCCCcccceEEEE--EeCccCCCEEEEEE
Confidence 3588999999 99999842 357999999982 246789999999999999999998 66544556699999
Q ss_pred cccCCCCCCccccccccCcccccc
Q 004954 341 IDNSDTRDGEVNGALHEGKADAEE 364 (722)
Q Consensus 341 ~D~D~~~~~d~iG~v~~~~~~~~~ 364 (722)
||+|++++++++|.+.+...+...
T Consensus 74 ~D~d~~~~dd~IG~~~l~L~~l~~ 97 (108)
T cd04039 74 LDKDKFSFNDYVATGSLSVQELLN 97 (108)
T ss_pred EECCCCCCCcceEEEEEEHHHHHh
Confidence 999999999999999998766544
No 466
>cd08682 C2_Rab11-FIP_classI C2 domain found in Rab11-family interacting proteins (FIP) class I. Rab GTPases recruit various effector proteins to organelles and vesicles. Rab11-family interacting proteins (FIPs) are involved in mediating the role of Rab11. FIPs can be divided into three classes: class I FIPs (Rip11a, Rip11b, RCP, and FIP2) which contain a C2 domain after N-terminus of the protein, class II FIPs (FIP3 and FIP4) which contain two EF-hands and a proline rich region, and class III FIPs (FIP1) which exhibits no homology to known protein domains. All FIP proteins contain a highly conserved, 20-amino acid motif at the C-terminus of the protein, known as Rab11/25 binding domain (RBD). Class I FIPs are thought to bind to endocytic membranes via their C2 domain, which interacts directly with phospholipids. Class II FIPs do not have any membrane binding domains leaving much to speculate about the mechanism involving FIP3 and FIP4 interactions with endocytic membranes. The member
Probab=99.51 E-value=9.4e-15 Score=136.38 Aligned_cols=89 Identities=15% Similarity=0.047 Sum_probs=77.0
Q ss_pred eEEEEeec-CCccccCCCCCCcceEEEecCCCCCcccceeeecccCCCcceeeeeeccccccc---Ccc-cccccccccc
Q 004954 268 GYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHF---KGA-EKDLMPAEID 342 (722)
Q Consensus 268 l~v~l~e~-~L~~~d~~g~sDpyvk~~l~~d~~~~~k~kt~~~k~tlnP~~nE~f~f~~~v~~---~~~-~~~L~~~V~D 342 (722)
++|.|.+| ||.++|.+|.+||||++.+. ..++||+++++|+||+|||+|.|. ++. +.. ...|.++|||
T Consensus 1 ~~V~V~~A~~L~~~d~~g~~dpYv~v~l~-----~~~~kT~v~~~t~nP~Wne~f~F~--v~~~~~~~~~~~~l~~~v~d 73 (126)
T cd08682 1 VQVTVLQARGLLCKGKSGTNDAYVIIQLG-----KEKYSTSVKEKTTSPVWKEECSFE--LPGLLSGNGNRATLQLTVMH 73 (126)
T ss_pred CEEEEEECcCCcCCCCCcCCCceEEEEEC-----CeeeeeeeecCCCCCEeCceEEEE--ecCcccCCCcCCEEEEEEEE
Confidence 47999999 99999999999999999994 246789999999999999999998 665 223 4569999999
Q ss_pred cCCCCCCccccccccCccccc
Q 004954 343 NSDTRDGEVNGALHEGKADAE 363 (722)
Q Consensus 343 ~D~~~~~d~iG~v~~~~~~~~ 363 (722)
++++++++++|.+.+...+..
T Consensus 74 ~~~~~~d~~iG~~~i~l~~l~ 94 (126)
T cd08682 74 RNLLGLDKFLGQVSIPLNDLD 94 (126)
T ss_pred ccccCCCceeEEEEEEHHHhh
Confidence 999999999999988876654
No 467
>cd08688 C2_KIAA0528-like C2 domain found in the Human KIAA0528 cDNA clone. The members of this CD are named after the Human KIAA0528 cDNA clone. All members here contain a single C2 repeat. No other information on this protein is currently known. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/a
Probab=99.51 E-value=1.1e-14 Score=132.81 Aligned_cols=90 Identities=12% Similarity=0.080 Sum_probs=79.8
Q ss_pred eEEEEeec-CCccccC-CCCCCcceEEEecCCCCCcccceeeecccCCCcce-eeeeecccccccCcc-ccccccccccc
Q 004954 268 GYLSSKEA-DLIDLQH-NVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDW-IEGFKGSSDLHFKGA-EKDLMPAEIDN 343 (722)
Q Consensus 268 l~v~l~e~-~L~~~d~-~g~sDpyvk~~l~~d~~~~~k~kt~~~k~tlnP~~-nE~f~f~~~v~~~~~-~~~L~~~V~D~ 343 (722)
|+|.|.+| ||++||. +|.+||||++++.. .++||+++++++||.| ||+|.|. ++...+ +..|.++|||+
T Consensus 1 l~V~v~~a~~L~~~d~~~~~~Dpyv~v~~~~-----~~~kT~v~~~~~nP~W~ne~f~f~--i~~~~l~~~~l~i~V~d~ 73 (110)
T cd08688 1 LKVRVVAARDLPVMDRSSDLTDAFVEVKFGS-----TTYKTDVVKKSLNPVWNSEWFRFE--VDDEELQDEPLQIRVMDH 73 (110)
T ss_pred CEEEEEEEECCCccccCCCCCCceEEEEECC-----eeEecceecCCCCCcccCcEEEEE--cChHHcCCCeEEEEEEeC
Confidence 67999999 9999994 78999999999953 5788999999999999 9999999 776655 45699999999
Q ss_pred CCCCCCccccccccCcccccc
Q 004954 344 SDTRDGEVNGALHEGKADAEE 364 (722)
Q Consensus 344 D~~~~~d~iG~v~~~~~~~~~ 364 (722)
+.+++++++|++.+...+...
T Consensus 74 d~~~~~~~iG~~~~~l~~l~~ 94 (110)
T cd08688 74 DTYSANDAIGKVYIDLNPLLL 94 (110)
T ss_pred CCCCCCCceEEEEEeHHHhcc
Confidence 999999999999998877665
No 468
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.51 E-value=1.1e-13 Score=159.87 Aligned_cols=135 Identities=21% Similarity=0.248 Sum_probs=101.9
Q ss_pred cCcEEEEEEeccCCCCceEEEEECCCCcEEEEEEeecc----h-----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEE
Q 004954 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----K-----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYD 483 (722)
Q Consensus 413 ~~rY~i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~----~-----~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~ 483 (722)
...|...+.||+|+||+||++.+.. ..+++|+.... . ....+..+|.++++.+++ ++++..+.
T Consensus 332 ~~~~~~~~~iG~G~~g~Vy~~~~~~--~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~------~~i~~p~~ 403 (535)
T PRK09605 332 KRRKIPDHLIGKGAEADIKKGEYLG--RDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARR------AGVPTPVI 403 (535)
T ss_pred ccccCccceeccCCcEEEEEEeecC--ccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcc------cCCCeeEE
Confidence 3445678899999999999998643 34444432211 1 122456788888888864 56777666
Q ss_pred EEEecCeEEEEEEcccc-chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCCCeE
Q 004954 484 YFYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI 562 (722)
Q Consensus 484 ~f~~~~~l~iVmEy~~g-sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~~~v 562 (722)
++......++||||++| +|.+++. ....++.|++.+|.+||+.|++||||||+|||++ ++.+
T Consensus 404 ~~~~~~~~~lv~E~~~g~~L~~~l~--------------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl~---~~~~ 466 (535)
T PRK09605 404 YDVDPEEKTIVMEYIGGKDLKDVLE--------------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIVR---DDRL 466 (535)
T ss_pred EEEeCCCCEEEEEecCCCcHHHHHH--------------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEEE---CCcE
Confidence 66677778999999986 4544443 3457899999999999999999999999999994 6789
Q ss_pred EEEecCCccc
Q 004954 563 KIIDLGSSCF 572 (722)
Q Consensus 563 kL~DFGls~~ 572 (722)
+|+|||+++.
T Consensus 467 ~liDFGla~~ 476 (535)
T PRK09605 467 YLIDFGLGKY 476 (535)
T ss_pred EEEeCccccc
Confidence 9999999865
No 469
>cd08401 C2A_RasA2_RasA3 C2 domain first repeat present in RasA2 and RasA3. RasA2 and RasA3 are GAP1s (GTPase activating protein 1s ), Ras-specific GAP members, which suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. RasA2 and RasA3 are both inositol 1,3,4,5-tetrakisphosphate-binding proteins and contain an N-terminal C2 domain, a Ras-GAP domain, a pleckstrin-homology (PH) domain which localizes it to the plasma membrane, and Bruton's Tyrosine Kinase (BTK) a zinc binding domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular p
Probab=99.50 E-value=2e-14 Score=133.38 Aligned_cols=89 Identities=18% Similarity=0.066 Sum_probs=75.6
Q ss_pred eEEEEeec-CCcccc-CCCCCCcceEEEecCCCCCcccceeeecccCCCcceeeeeecccccccCcccccccccccccCC
Q 004954 268 GYLSSKEA-DLIDLQ-HNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAEKDLMPAEIDNSD 345 (722)
Q Consensus 268 l~v~l~e~-~L~~~d-~~g~sDpyvk~~l~~d~~~~~k~kt~~~k~tlnP~~nE~f~f~~~v~~~~~~~~L~~~V~D~D~ 345 (722)
|+|.|.+| ||++++ .+|.+||||++++. .+++.||+++++|+||+|||+|.|. ++.. .+.|.+.|||+++
T Consensus 2 l~v~v~~a~~L~~~~~~~g~sDpYv~v~l~----~~~~~kT~v~~kt~~P~WnE~F~f~--v~~~--~~~l~~~v~d~~~ 73 (121)
T cd08401 2 LKIKIGEAKNLPPRSGPNKMRDCYCTVNLD----QEEVFRTKTVEKSLCPFFGEDFYFE--IPRT--FRHLSFYIYDRDV 73 (121)
T ss_pred eEEEEEEccCCCCCCCCCCCcCcEEEEEEC----CccEEEeeEEECCCCCccCCeEEEE--cCCC--CCEEEEEEEECCC
Confidence 67999999 999985 57899999999992 2246789999999999999999999 7643 3569999999999
Q ss_pred CCCCccccccccCcccccc
Q 004954 346 TRDGEVNGALHEGKADAEE 364 (722)
Q Consensus 346 ~~~~d~iG~v~~~~~~~~~ 364 (722)
+++++++|.+.+...+...
T Consensus 74 ~~~~~~iG~~~i~l~~l~~ 92 (121)
T cd08401 74 LRRDSVIGKVAIKKEDLHK 92 (121)
T ss_pred CCCCceEEEEEEEHHHccC
Confidence 9999999999887665543
No 470
>cd04032 C2_Perforin C2 domain of Perforin. Perforin contains a single copy of a C2 domain in its C-terminus and plays a role in lymphocyte-mediated cytotoxicity. Mutations in perforin leads to familial hemophagocytic lymphohistiocytosis type 2. The function of perforin is calcium dependent and the C2 domain is thought to confer this binding to target cell membranes. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few
Probab=99.48 E-value=5.4e-14 Score=131.35 Aligned_cols=91 Identities=10% Similarity=-0.050 Sum_probs=75.5
Q ss_pred ccceeEEEEeec-CCccccCCCCCCcceEEEecCCCCCcccceeeecccCCCcceeeeeecccccccCcccccccccccc
Q 004954 264 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAEKDLMPAEID 342 (722)
Q Consensus 264 s~~~l~v~l~e~-~L~~~d~~g~sDpyvk~~l~~d~~~~~k~kt~~~k~tlnP~~nE~f~f~~~v~~~~~~~~L~~~V~D 342 (722)
....|+|.|.+| +|+ +|..|.+|||||+++. .+++||+++++++||+|||+|.|. .........|.++|||
T Consensus 26 ~~~~L~V~V~~A~~L~-~d~~g~~DPYVkV~~~-----~~~~kT~vi~~t~nPvWNE~F~f~--~~~~~~~~~L~v~V~D 97 (127)
T cd04032 26 GLATLTVTVLRATGLW-GDYFTSTDGYVKVFFG-----GQEKRTEVIWNNNNPRWNATFDFG--SVELSPGGKLRFEVWD 97 (127)
T ss_pred CcEEEEEEEEECCCCC-cCcCCCCCeEEEEEEC-----CccccCceecCCCCCcCCCEEEEe--cccCCCCCEEEEEEEe
Confidence 446899999999 997 5888999999999983 127899999999999999999997 3222234559999999
Q ss_pred cCCCCCCccccccccCcccc
Q 004954 343 NSDTRDGEVNGALHEGKADA 362 (722)
Q Consensus 343 ~D~~~~~d~iG~v~~~~~~~ 362 (722)
+|.+++++++|.+.++...+
T Consensus 98 ~d~~s~dd~IG~~~i~l~~~ 117 (127)
T cd04032 98 RDNGWDDDLLGTCSVVPEAG 117 (127)
T ss_pred CCCCCCCCeeEEEEEEecCC
Confidence 99999999999998876533
No 471
>cd08390 C2A_Synaptotagmin-15-17 C2A domain first repeat present in Synaptotagmins 15 and 17. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. It is thought to be involved in the trafficking and exocytosis of secretory vesicles in non-neuronal tissues and is Ca2+ independent. Human synaptotagmin 15 has 2 alternatively spliced forms that encode proteins with different C-termini. The larger, SYT15a, contains a N-terminal TM region, a putative fatty-acylation site, and 2 tandem C terminal C2 domains. The smaller, SYT15b, lacks the C-terminal portion of the second C2 domain. Unlike most other synaptotagmins it is nearly absent in the brain and rather is found in the heart, lungs, skeletal muscle, and testis. Synaptotagmin 17 is located in the brain, kidney, and prostate and is thought to be a peripheral membrane protein. Previously all synaptotagmins were thought to be calcium sensors in the regulat
Probab=99.48 E-value=3.6e-14 Score=131.57 Aligned_cols=98 Identities=15% Similarity=0.054 Sum_probs=85.4
Q ss_pred ccceeEEEEeec-CCcccc-CCCCCCcceEEEecCCCCCcccceeeecccCCCcceeeeeecccccccCcc-cccccccc
Q 004954 264 NNDYGYLSSKEA-DLIDLQ-HNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPAE 340 (722)
Q Consensus 264 s~~~l~v~l~e~-~L~~~d-~~g~sDpyvk~~l~~d~~~~~k~kt~~~k~tlnP~~nE~f~f~~~v~~~~~-~~~L~~~V 340 (722)
..+.|+|.|.+| ||+++| .+|.+||||++++.|+.+. +++|+++++++||+|||+|.|. ++.... .+.|.+.|
T Consensus 12 ~~~~L~V~v~~a~~L~~~~~~~~~~dpyV~v~l~~~~~~--~~~T~v~~~~~~P~wne~f~f~--i~~~~l~~~~l~i~v 87 (123)
T cd08390 12 EEEQLTVSLIKARNLPPRTKDVAHCDPFVKVCLLPDERR--SLQSKVKRKTQNPNFDETFVFQ--VSFKELQRRTLRLSV 87 (123)
T ss_pred CCCEEEEEEEEecCCCCccCCCCCCCcEEEEEEeeCCCC--ceEeeeEcCCCCCccceEEEEE--cCHHHhcccEEEEEE
Confidence 457899999999 999999 7889999999999987653 5789999999999999999999 877666 45699999
Q ss_pred cccCCCCCCccccccccCccccccc
Q 004954 341 IDNSDTRDGEVNGALHEGKADAEEH 365 (722)
Q Consensus 341 ~D~D~~~~~d~iG~v~~~~~~~~~e 365 (722)
||++..++++++|.+.++..+....
T Consensus 88 ~d~~~~~~~~~iG~~~i~L~~l~~~ 112 (123)
T cd08390 88 YDVDRFSRHCIIGHVLFPLKDLDLV 112 (123)
T ss_pred EECCcCCCCcEEEEEEEeccceecC
Confidence 9999999999999999887665553
No 472
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.47 E-value=4.3e-13 Score=125.83 Aligned_cols=134 Identities=20% Similarity=0.229 Sum_probs=108.6
Q ss_pred EEEEeccCCCCceEEEEECCCCcEEEEEEeecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEEEc
Q 004954 418 VTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCEL 497 (722)
Q Consensus 418 i~~~LG~G~fG~Vy~a~d~~tg~~vAvKil~~~~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~~~l~iVmEy 497 (722)
+.+.||.|.++.||++.+. +..+++|+...... ...+..|..+++.+++. ..++++++.++...+..+++|||
T Consensus 2 ~~~~i~~g~~~~v~~~~~~--~~~~~iK~~~~~~~-~~~~~~e~~~~~~l~~~----~~~~p~~~~~~~~~~~~~~v~e~ 74 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTK--DEDYVLKINPSREK-GADREREVAILQLLARK----GLPVPKVLASGESDGWSYLLMEW 74 (155)
T ss_pred cceecccccccceEEEEec--CCeEEEEecCCCCc-hhHHHHHHHHHHHHHHc----CCCCCeEEEEcCCCCccEEEEEe
Confidence 4578999999999999964 37899999876543 45688899999999864 24688888888877889999999
Q ss_pred cccchHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHC---CCccccCCCCceEEcccCCCeEEEEecCCccc
Q 004954 498 LRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL---GIIHCDLKPENILIKSYQRCEIKIIDLGSSCF 572 (722)
Q Consensus 498 ~~gsLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~---gIvHrDLKp~NILl~~~~~~~vkL~DFGls~~ 572 (722)
+.+..+..+ +......++.+++.+|+.||.. +++|+|++|.||+++. .+.++++|||.+..
T Consensus 75 ~~g~~~~~~------------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~--~~~~~l~Df~~~~~ 138 (155)
T cd05120 75 IEGETLDEV------------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDD--GKILGIIDWEYAGY 138 (155)
T ss_pred cCCeecccC------------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEEC--CcEEEEEecccccC
Confidence 986533211 3456677899999999999985 6999999999999985 68899999998753
No 473
>cd08376 C2B_MCTP_PRT C2 domain second repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP). MCTPs are involved in Ca2+ signaling at the membrane. MCTP is composed of a variable N-terminal sequence, three C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular protei
Probab=99.46 E-value=4.9e-14 Score=129.40 Aligned_cols=89 Identities=15% Similarity=0.133 Sum_probs=76.9
Q ss_pred eEEEEeec-CCccccCCCCCCcceEEEecCCCCCcccceeeecccCCCcceeeeeecccccccCcccccccccccccCCC
Q 004954 268 GYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAEKDLMPAEIDNSDT 346 (722)
Q Consensus 268 l~v~l~e~-~L~~~d~~g~sDpyvk~~l~~d~~~~~k~kt~~~k~tlnP~~nE~f~f~~~v~~~~~~~~L~~~V~D~D~~ 346 (722)
++|.|.+| ||+++|.+|.+||||++++. ..+.||+++++|+||.|||+|.|. +... .+..|.++|||++.+
T Consensus 2 ~~V~v~~a~~L~~~~~~~~~dPyv~v~~~-----~~~~kT~v~~~t~nP~Wne~f~f~--~~~~-~~~~l~v~v~d~~~~ 73 (116)
T cd08376 2 VTIVLVEGKNLPPMDDNGLSDPYVKFRLG-----NEKYKSKVCSKTLNPQWLEQFDLH--LFDD-QSQILEIEVWDKDTG 73 (116)
T ss_pred EEEEEEEEECCCCCCCCCCCCcEEEEEEC-----CEeEecccccCCCCCceeEEEEEE--ecCC-CCCEEEEEEEECCCC
Confidence 68999999 99999999999999999983 246889999999999999999998 5543 245699999999999
Q ss_pred CCCccccccccCcccccc
Q 004954 347 RDGEVNGALHEGKADAEE 364 (722)
Q Consensus 347 ~~~d~iG~v~~~~~~~~~ 364 (722)
++++++|.+.++..+...
T Consensus 74 ~~~~~iG~~~~~l~~l~~ 91 (116)
T cd08376 74 KKDEFIGRCEIDLSALPR 91 (116)
T ss_pred CCCCeEEEEEEeHHHCCC
Confidence 999999999988765443
No 474
>cd04036 C2_cPLA2 C2 domain present in cytosolic PhosphoLipase A2 (cPLA2). A single copy of the C2 domain is present in cPLA2 which releases arachidonic acid from membranes initiating the biosynthesis of potent inflammatory mediators such as prostaglandins, leukotrienes, and platelet-activating factor. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants o
Probab=99.45 E-value=5.8e-14 Score=129.65 Aligned_cols=91 Identities=11% Similarity=0.036 Sum_probs=77.6
Q ss_pred eEEEEeec-CCccccCCCCCCcceEEEecCCCCCcccceeeecccCCCcceeeeeecccccccCcccccccccccccCCC
Q 004954 268 GYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAEKDLMPAEIDNSDT 346 (722)
Q Consensus 268 l~v~l~e~-~L~~~d~~g~sDpyvk~~l~~d~~~~~k~kt~~~k~tlnP~~nE~f~f~~~v~~~~~~~~L~~~V~D~D~~ 346 (722)
|+|.|.+| ||++.|..|.+||||++.+...+ ..+++|+++++++||+|||+|.|. +... ....|.++|||+|.+
T Consensus 2 L~V~vi~a~~L~~~~~~~~~Dpyv~v~~~~~~--~~~~kT~vv~~t~nP~Wne~f~f~--i~~~-~~~~l~v~v~d~d~~ 76 (119)
T cd04036 2 LTVRVLRATNITKGDLLSTPDCYVELWLPTAS--DEKKRTKTIKNSINPVWNETFEFR--IQSQ-VKNVLELTVMDEDYV 76 (119)
T ss_pred eEEEEEEeeCCCccCCCCCCCcEEEEEEcCCC--CccCccceecCCCCCccceEEEEE--eCcc-cCCEEEEEEEECCCC
Confidence 78999999 99999999999999999996543 347889999999999999999998 6654 344599999999999
Q ss_pred CCCccccccccCcccccc
Q 004954 347 RDGEVNGALHEGKADAEE 364 (722)
Q Consensus 347 ~~~d~iG~v~~~~~~~~~ 364 (722)
+++++|++.+.......
T Consensus 77 -~~~~iG~~~~~l~~l~~ 93 (119)
T cd04036 77 -MDDHLGTVLFDVSKLKL 93 (119)
T ss_pred -CCcccEEEEEEHHHCCC
Confidence 99999999887765443
No 475
>cd04018 C2C_Ferlin C2 domain third repeat in Ferlin. Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen
Probab=99.44 E-value=6.7e-14 Score=134.53 Aligned_cols=94 Identities=15% Similarity=0.106 Sum_probs=79.2
Q ss_pred eeEEEEeec-CCccccCCC--------------CCCcceEEEecCCCCCcccceeeecccCCCcceeeeeecccccccCc
Q 004954 267 YGYLSSKEA-DLIDLQHNV--------------VGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKG 331 (722)
Q Consensus 267 ~l~v~l~e~-~L~~~d~~g--------------~sDpyvk~~l~~d~~~~~k~kt~~~k~tlnP~~nE~f~f~~~v~~~~ 331 (722)
.|+|+|.+| +|++||..+ .+||||++.+.. ++.||+++++++||+|||+|.|. +....
T Consensus 1 ~~~V~V~~A~dLp~~d~~~~~~~~~~~~~~~~~~~DPYV~V~~~g-----~~~kT~v~~~t~nPvWNE~f~f~--v~~p~ 73 (151)
T cd04018 1 RFIFKIYRAEDLPQMDSGIMANVKKAFLGEKKELVDPYVEVSFAG-----QKVKTSVKKNSYNPEWNEQIVFP--EMFPP 73 (151)
T ss_pred CeEEEEEEeCCCCccChhhhccceeccccCCCCCcCcEEEEEECC-----EeeecceEcCCCCCCcceEEEEE--eeCCC
Confidence 478999999 999999665 689999999853 35689999999999999999998 55444
Q ss_pred ccccccccccccCCCCCCccccccccCccccccccC
Q 004954 332 AEKDLMPAEIDNSDTRDGEVNGALHEGKADAEEHGV 367 (722)
Q Consensus 332 ~~~~L~~~V~D~D~~~~~d~iG~v~~~~~~~~~e~~ 367 (722)
.+..|.++|||+|.+++++++|.+.+....+..++.
T Consensus 74 ~~~~l~~~v~D~d~~~~dd~iG~~~l~l~~l~~~~~ 109 (151)
T cd04018 74 LCERIKIQIRDWDRVGNDDVIGTHFIDLSKISNSGD 109 (151)
T ss_pred cCCEEEEEEEECCCCCCCCEEEEEEEeHHHhccCCc
Confidence 556799999999999999999999998776655554
No 476
>cd04025 C2B_RasA1_RasA4 C2 domain second repeat present in RasA1 and RasA4. RasA1 and RasA4 are GAP1s (GTPase activating protein 1s ), Ras-specific GAP members, which suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. Both proteins contain two C2 domains, a Ras-GAP domain, a plextrin homology (PH)-like domain, and a Bruton's Tyrosine Kinase (BTK) zinc binding domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such a
Probab=99.44 E-value=1e-13 Score=128.78 Aligned_cols=90 Identities=17% Similarity=0.043 Sum_probs=77.7
Q ss_pred eeEEEEeec-CCccccCCCCCCcceEEEecCCCCCcccceeeecccCCCcceeeeeecccccccCcccccccccccccCC
Q 004954 267 YGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAEKDLMPAEIDNSD 345 (722)
Q Consensus 267 ~l~v~l~e~-~L~~~d~~g~sDpyvk~~l~~d~~~~~k~kt~~~k~tlnP~~nE~f~f~~~v~~~~~~~~L~~~V~D~D~ 345 (722)
+|+|.|.+| +|.++|.+|.+||||++++. ..+.+|+++++|+||.|||+|.|. +.... ...|.++|||++.
T Consensus 1 ~L~v~vi~a~~L~~~d~~~~~DPyv~v~~~-----~~~~kT~v~~~t~nP~Wne~f~f~--~~~~~-~~~l~~~v~d~~~ 72 (123)
T cd04025 1 RLRCHVLEARDLAPKDRNGTSDPFVRVFYN-----GQTLETSVVKKSCYPRWNEVFEFE--LMEGA-DSPLSVEVWDWDL 72 (123)
T ss_pred CEEEEEEEeeCCCCCCCCCCcCceEEEEEC-----CEEEeceeecCCCCCccCcEEEEE--cCCCC-CCEEEEEEEECCC
Confidence 589999999 99999999999999999983 245789999999999999999998 65533 4559999999999
Q ss_pred CCCCccccccccCcccccc
Q 004954 346 TRDGEVNGALHEGKADAEE 364 (722)
Q Consensus 346 ~~~~d~iG~v~~~~~~~~~ 364 (722)
+++++++|.+.++..+...
T Consensus 73 ~~~~~~iG~~~~~l~~l~~ 91 (123)
T cd04025 73 VSKNDFLGKVVFSIQTLQQ 91 (123)
T ss_pred CCCCcEeEEEEEEHHHccc
Confidence 9999999999998766543
No 477
>cd00276 C2B_Synaptotagmin C2 domain second repeat present in Synaptotagmin. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. There are several classes of Synaptotagmins. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distin
Probab=99.43 E-value=6.8e-14 Score=131.45 Aligned_cols=103 Identities=16% Similarity=0.081 Sum_probs=89.6
Q ss_pred ccceeEEEEeec-CCccccCCCCCCcceEEEecCCCCCcccceeeecccCCCcceeeeeecccccccCcc-ccccccccc
Q 004954 264 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPAEI 341 (722)
Q Consensus 264 s~~~l~v~l~e~-~L~~~d~~g~sDpyvk~~l~~d~~~~~k~kt~~~k~tlnP~~nE~f~f~~~v~~~~~-~~~L~~~V~ 341 (722)
+.+.|+|.|.+| ||+++|.+|..||||++.+.++.....+++|++++++.||.|||+|.|. ++...+ +..|.++||
T Consensus 12 ~~~~L~V~v~~a~~L~~~~~~~~~dpyv~v~l~~~~~~~~~~~T~~~~~~~~P~wne~f~f~--i~~~~l~~~~l~~~v~ 89 (134)
T cd00276 12 TAERLTVVVLKARNLPPSDGKGLSDPYVKVSLLQGGKKLKKKKTSVKKGTLNPVFNEAFSFD--VPAEQLEEVSLVITVV 89 (134)
T ss_pred CCCEEEEEEEEeeCCCCccCCCCCCcEEEEEEEcCCeEeeeecCcceecCCCCeeeeeEEEE--CCHHHhCCcEEEEEEE
Confidence 457899999999 9999999999999999999998766678899999999999999999999 777665 456999999
Q ss_pred ccCCCCCCccccccccCccccccccCCC
Q 004954 342 DNSDTRDGEVNGALHEGKADAEEHGVAT 369 (722)
Q Consensus 342 D~D~~~~~d~iG~v~~~~~~~~~e~~~~ 369 (722)
|.+.+++++++|.+.++..+ .+.+...
T Consensus 90 d~~~~~~~~~lG~~~i~l~~-~~~~~~~ 116 (134)
T cd00276 90 DKDSVGRNEVIGQVVLGPDS-GGEELEH 116 (134)
T ss_pred ecCCCCCCceeEEEEECCCC-CCcHHHH
Confidence 99999999999999999877 4444443
No 478
>cd04016 C2_Tollip C2 domain present in Toll-interacting protein (Tollip). Tollip is a part of the Interleukin-1 receptor (IL-1R) signaling pathway. Tollip is proposed to link serine/threonine kinase IRAK to IL-1Rs as well as inhibiting phosphorylation of IRAK. There is a single C2 domain present in Tollip. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice varian
Probab=99.43 E-value=1.5e-13 Score=127.30 Aligned_cols=85 Identities=8% Similarity=-0.044 Sum_probs=72.2
Q ss_pred ceeEEEEeec-CCccccCCCCCCcceEEEecCCCCCcccceeeeccc-CCCcceeeeeecccccccCccccccccccccc
Q 004954 266 DYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKR-GSSIDWIEGFKGSSDLHFKGAEKDLMPAEIDN 343 (722)
Q Consensus 266 ~~l~v~l~e~-~L~~~d~~g~sDpyvk~~l~~d~~~~~k~kt~~~k~-tlnP~~nE~f~f~~~v~~~~~~~~L~~~V~D~ 343 (722)
+.|+|.|++| +|+.++ .|.+||||++.+- .++.+|+++++ ++||+|||+|.|. +... ...|.++|||.
T Consensus 2 g~L~v~v~~Ak~l~~~~-~g~sDPYv~i~lg-----~~~~kT~v~~~~~~nP~WNe~F~f~--v~~~--~~~l~~~V~d~ 71 (121)
T cd04016 2 GRLSITVVQAKLVKNYG-LTRMDPYCRIRVG-----HAVYETPTAYNGAKNPRWNKTIQCT--LPEG--VDSIYIEIFDE 71 (121)
T ss_pred cEEEEEEEEccCCCcCC-CCCCCceEEEEEC-----CEEEEeEEccCCCCCCccCeEEEEE--ecCC--CcEEEEEEEeC
Confidence 5789999999 888887 6899999999992 24678988665 8999999999998 6543 24599999999
Q ss_pred CCCCCCccccccccCcc
Q 004954 344 SDTRDGEVNGALHEGKA 360 (722)
Q Consensus 344 D~~~~~d~iG~v~~~~~ 360 (722)
|.+++++++|++.+...
T Consensus 72 d~~~~dd~iG~~~i~l~ 88 (121)
T cd04016 72 RAFTMDERIAWTHITIP 88 (121)
T ss_pred CCCcCCceEEEEEEECc
Confidence 99999999999887764
No 479
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.43 E-value=1.4e-14 Score=168.15 Aligned_cols=258 Identities=21% Similarity=0.262 Sum_probs=183.6
Q ss_pred cCcEEEEEEeccCCCCceEEEEEC-CCCcEEEEEEeecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec
Q 004954 413 AGRYYVTEYLGSAAFSKVFQAQDL-HTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 488 (722)
Q Consensus 413 ~~rY~i~~~LG~G~fG~Vy~a~d~-~tg~~vAvKil~~~---~~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f~~~ 488 (722)
...|.+.+.||+|+|+.|-+.... .+...+|+|.+... .........|..+-+.+.. |+|++++++.....
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~-----h~n~~~~~~~~~~~ 93 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSK-----HSNTVHMIEPSSSP 93 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccc-----cccccccCCccCCC
Confidence 356888889999999999999863 33445666655433 2223333345554444432 88999999999999
Q ss_pred CeEEEEEEccccc-hHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHH-HCCCccccCCCCceEEcccCCC-eEEEE
Q 004954 489 EHLFIVCELLRAN-LYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLH-SLGIIHCDLKPENILIKSYQRC-EIKII 565 (722)
Q Consensus 489 ~~l~iVmEy~~gs-Ll~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLH-s~gIvHrDLKp~NILl~~~~~~-~vkL~ 565 (722)
+..+++++|..|+ +.+.+.. ......+......++.|+..+|.|+| ..++.|+||||+|.+++. .+ .++++
T Consensus 94 ~~~~~~~~~s~g~~~f~~i~~----~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~--s~~~l~~~ 167 (601)
T KOG0590|consen 94 RSYLLSLSYSDGGSLFSKISH----PDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDE--SGSALKIA 167 (601)
T ss_pred cccccccCccccccccccccc----CCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhcc--CCCcccCC
Confidence 9999999997653 4333311 11113667788899999999999999 999999999999999996 55 89999
Q ss_pred ecCCcccccC-C-----cccccc-CCcccCchhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhcC
Q 004954 566 DLGSSCFQTD-N-----LCLYVQ-SRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLG 637 (722)
Q Consensus 566 DFGls~~~~~-~-----~~~~~g-t~~y~APE~l~~~-~~s~ksDIWSLGviL~elltG~~PF~~~~~~e~l~~i~~~lg 637 (722)
|||+|..... . ....+| ++.|+|||...+. -.....|+||.|+++..+++|..||.........
T Consensus 168 df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~-------- 239 (601)
T KOG0590|consen 168 DFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGR-------- 239 (601)
T ss_pred CchhhccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccccccc--------
Confidence 9999976554 2 223578 9999999999885 4567899999999999999999999654321100
Q ss_pred CCcHHHHhhhhhhhhhhcccccchhhhhccccccccCCccchhhhhcccCcHHHHHHHHHhcccCCCCCcCHHHHHhCCC
Q 004954 638 PIDLEMLMQGQEIYKYFTKEYDLYYINEETNQLEYIIPEESSLEHHLQFSDAFFIDFVRTLLEINPQRRPTAREALDHPW 717 (722)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~l~~~~~~~~~~l~dLL~~mL~~dP~kRpTa~ElL~HPw 717 (722)
...|.. .. ....+ .. .........+++.++|..+|..|.+.+++-.+||
T Consensus 240 ------------~~~~~~--------~~--~~~~~--~~-------~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~ 288 (601)
T KOG0590|consen 240 ------------YSSWKS--------NK--GRFTQ--LP-------WNSISDQAHDLLHKILKENPSNRLSIEELKLDNW 288 (601)
T ss_pred ------------ceeecc--------cc--ccccc--Cc-------cccCChhhhhcccccccCCchhcccccccccccc
Confidence 000000 00 00000 00 0112234679999999999999999999999999
Q ss_pred CCC
Q 004954 718 LQH 720 (722)
Q Consensus 718 f~~ 720 (722)
+..
T Consensus 289 ~~~ 291 (601)
T KOG0590|consen 289 LSS 291 (601)
T ss_pred ccc
Confidence 975
No 480
>cd04022 C2A_MCTP_PRT_plant C2 domain first repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset. MCTPs are involved in Ca2+ signaling at the membrane. Plant-MCTPs are composed of a variable N-terminal sequence, four C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates
Probab=99.42 E-value=1.2e-13 Score=129.16 Aligned_cols=90 Identities=9% Similarity=0.011 Sum_probs=77.6
Q ss_pred eeEEEEeec-CCccccCCCCCCcceEEEecCCCCCcccceeeecccCCCcceeeeeeccccccc-Ccc-ccccccccccc
Q 004954 267 YGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHF-KGA-EKDLMPAEIDN 343 (722)
Q Consensus 267 ~l~v~l~e~-~L~~~d~~g~sDpyvk~~l~~d~~~~~k~kt~~~k~tlnP~~nE~f~f~~~v~~-~~~-~~~L~~~V~D~ 343 (722)
+|+|.|++| ||.++|.+|.+||||++++.. .+++|+++++++||+|||+|.|. +.. ... +..|.++|||.
T Consensus 1 ~L~V~vi~A~~L~~~d~~g~~dpyv~v~~~~-----~~~rT~v~~~t~nP~Wne~f~f~--~~~~~~~~~~~l~~~V~d~ 73 (127)
T cd04022 1 KLVVEVVDAQDLMPKDGQGSSSAYVELDFDG-----QKKRTRTKPKDLNPVWNEKLVFN--VSDPSRLSNLVLEVYVYND 73 (127)
T ss_pred CeEEEEEEeeCCCCCCCCCCcCcEEEEEECC-----EEecceeEcCCCCCccceEEEEE--ccCHHHccCCeEEEEEeeC
Confidence 589999999 999999999999999999864 36789999999999999999999 553 222 45699999999
Q ss_pred CCCC-CCccccccccCccccc
Q 004954 344 SDTR-DGEVNGALHEGKADAE 363 (722)
Q Consensus 344 D~~~-~~d~iG~v~~~~~~~~ 363 (722)
+++. +++++|++.++..+..
T Consensus 74 ~~~~~~d~~lG~v~i~l~~l~ 94 (127)
T cd04022 74 RRSGRRRSFLGRVRISGTSFV 94 (127)
T ss_pred CCCcCCCCeeeEEEEcHHHcC
Confidence 9997 7999999999876655
No 481
>cd08690 C2_Freud-1 C2 domain found in 5' repressor element under dual repression binding protein-1 (Freud-1). Freud-1 is a novel calcium-regulated repressor that negatively regulates basal 5-HT1A receptor expression in neurons. It may also play a role in the altered regulation of 5-HT1A receptors associated with anxiety or major depression. Freud-1 contains two DM-14 basic repeats, a helix-loop-helix DNA binding domain, and a C2 domain. The Freud-1 C2 domain is thought to be calcium insensitive and it lacks several acidic residues that mediate calcium binding of the PKC C2 domain. In addition, it contains a poly-basic insert that is not present in calcium-dependent C2 domains and may function as a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules tha
Probab=99.42 E-value=1.7e-13 Score=131.94 Aligned_cols=94 Identities=15% Similarity=0.033 Sum_probs=75.5
Q ss_pred EEEEeec---CCccccCCCCCCcceEEEecCCCCCcccceeeecccCCCcceeeeeecccccccCc------c-cccccc
Q 004954 269 YLSSKEA---DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKG------A-EKDLMP 338 (722)
Q Consensus 269 ~v~l~e~---~L~~~d~~g~sDpyvk~~l~~d~~~~~k~kt~~~k~tlnP~~nE~f~f~~~v~~~~------~-~~~L~~ 338 (722)
.|+|+.| +|++.+.+|.+|||||++|+....+.++.||+++|+|+||+|||+|.|. ++... . ++.|.+
T Consensus 5 el~i~~~~~~~l~~~~~~~~~DpYVk~~l~~p~~~~~k~KT~v~k~TlnPvfNE~f~f~--I~~~~~~~~R~l~~~~L~~ 82 (155)
T cd08690 5 ELTIVRCIGIPLPSGWNPKDLDTYVKFEFPYPNEEPQSGKTSTIKDTNSPEYNESFKLN--INRKHRSFQRVFKRHGLKF 82 (155)
T ss_pred EEEEEEeeccccCCCcCCCCCCeEEEEEEecCCCCCceeecCcccCCCCCcccceEEEE--eccccchhhhhccCCcEEE
Confidence 4445555 5899999999999999998543556789999999999999999999999 76552 3 455999
Q ss_pred cccccCCCC-CCccccccccCcccccc
Q 004954 339 AEIDNSDTR-DGEVNGALHEGKADAEE 364 (722)
Q Consensus 339 ~V~D~D~~~-~~d~iG~v~~~~~~~~~ 364 (722)
+|||++.+. +++++|++.+.......
T Consensus 83 ~V~d~~~f~~~D~~iG~~~i~L~~l~~ 109 (155)
T cd08690 83 EVYHKGGFLRSDKLLGTAQVKLEPLET 109 (155)
T ss_pred EEEeCCCcccCCCeeEEEEEEcccccc
Confidence 999999975 69999999886654433
No 482
>cd08686 C2_ABR C2 domain in the Active BCR (Breakpoint cluster region) Related protein. The ABR protein is similar to the breakpoint cluster region protein. It has homology to guanine nucleotide exchange proteins and GTPase-activating proteins (GAPs). ABR is expressed primarily in the brain, but also includes non-neuronal tissues such as the heart. It has been associated with human diseases such as Miller-Dieker syndrome in which mental retardation and malformations of the heart are present. ABR contains a RhoGEF domain and a PH-like domain upstream of its C2 domain and a RhoGAP domain downstream of this domain. A few members also contain a Bcr-Abl oncoprotein oligomerization domain at the very N-terminal end. Splice variants of ABR have been identified. ABR is found in a wide variety of organisms including chimpanzee, dog, mouse, rat, fruit fly, and mosquito. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arr
Probab=99.42 E-value=1.5e-13 Score=125.58 Aligned_cols=80 Identities=10% Similarity=0.058 Sum_probs=68.4
Q ss_pred eEEEEeec-CCccccCCCCCCcceEEEecCCCCCcccceeeecccCCCcceeeeeecccccccCccccccccccccc---
Q 004954 268 GYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAEKDLMPAEIDN--- 343 (722)
Q Consensus 268 l~v~l~e~-~L~~~d~~g~sDpyvk~~l~~d~~~~~k~kt~~~k~tlnP~~nE~f~f~~~v~~~~~~~~L~~~V~D~--- 343 (722)
|+|+|++| ||+ |.+||||++.+.+.++...+.||+++++|+||+|||+|.|. ++ ..++|.+.|||+
T Consensus 1 L~V~V~~A~~L~-----~~sDPYV~l~v~~~~~~~~~~KTk~i~~TlnPvWnE~F~i~--l~---~s~~L~~~v~d~~~~ 70 (118)
T cd08686 1 LNVIVHSAQGFK-----QSANLYCTLEVDSFGYFVKKAKTRVCRDTTEPNWNEEFEIE--LE---GSQTLRILCYEKCYS 70 (118)
T ss_pred CEEEEEeCCCCC-----CCCCCEEEEEEcCccccceeeeeeeecCCCCCccceEEEEE--eC---CCCEEEEEEEEcccc
Confidence 67999999 995 67999999999998765678999999999999999999998 65 244799999998
Q ss_pred ----CCCCCCcccccccc
Q 004954 344 ----SDTRDGEVNGALHE 357 (722)
Q Consensus 344 ----D~~~~~d~iG~v~~ 357 (722)
|.++.++.+|...+
T Consensus 71 ~~~~d~~~~d~~~G~g~i 88 (118)
T cd08686 71 KVKLDGEGTDAIMGKGQI 88 (118)
T ss_pred cccccccCcccEEEEEEE
Confidence 57778899976544
No 483
>cd04035 C2A_Rabphilin_Doc2 C2 domain first repeat present in Rabphilin and Double C2 domain. Rabphilin is found neurons and in neuroendrocrine cells, while Doc2 is found not only in the brain but in tissues, including mast cells, chromaffin cells, and osteoblasts. Rabphilin and Doc2s share highly homologous tandem C2 domains, although their N-terminal structures are completely different: rabphilin contains an N-terminal Rab-binding domain (RBD),7 whereas Doc2 contains an N-terminal Munc13-1-interacting domain (MID). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain
Probab=99.42 E-value=1.9e-13 Score=126.95 Aligned_cols=100 Identities=12% Similarity=0.075 Sum_probs=84.5
Q ss_pred ccceeEEEEeec-CCccccCCCCCCcceEEEecCCCCCcccceeeecccCCCcceeeeeecccccccCcc-ccccccccc
Q 004954 264 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPAEI 341 (722)
Q Consensus 264 s~~~l~v~l~e~-~L~~~d~~g~sDpyvk~~l~~d~~~~~k~kt~~~k~tlnP~~nE~f~f~~~v~~~~~-~~~L~~~V~ 341 (722)
.+.+|+|.|.+| +|+++|..|.+|||||+++.++.....+++|+++++++||+|||+|.|.. ++.... +..|.++||
T Consensus 13 ~~~~L~V~v~~a~~L~~~~~~~~~dpyv~v~~~~~~~~~~~~rT~v~~~~~~P~Wne~f~f~~-~~~~~~~~~~l~~~v~ 91 (123)
T cd04035 13 ANSALHCTIIRAKGLKAMDANGLSDPYVKLNLLPGASKATKLRTKTVHKTRNPEFNETLTYYG-ITEEDIQRKTLRLLVL 91 (123)
T ss_pred CCCEEEEEEEEeeCCCCCCCCCCCCceEEEEEecCCCCCCceeeeeecCCCCCCccceEEEcC-CCHHHhCCCEEEEEEE
Confidence 457899999999 99999999999999999999887666789999999999999999999963 333333 456999999
Q ss_pred ccCCCCCCccccccccCccccccc
Q 004954 342 DNSDTRDGEVNGALHEGKADAEEH 365 (722)
Q Consensus 342 D~D~~~~~d~iG~v~~~~~~~~~e 365 (722)
|++.+ +++++|.+.++..+...+
T Consensus 92 d~~~~-~~~~iG~~~i~l~~l~~~ 114 (123)
T cd04035 92 DEDRF-GNDFLGETRIPLKKLKPN 114 (123)
T ss_pred EcCCc-CCeeEEEEEEEcccCCCC
Confidence 99999 899999999887655443
No 484
>cd04026 C2_PKC_alpha_gamma C2 domain in Protein Kinase C (PKC) alpha and gamma. A single C2 domain is found in PKC alpha and gamma. The PKC family of serine/threonine kinases regulates apoptosis, proliferation, migration, motility, chemo-resistance, and differentiation. There are 3 groups: group 1(alpha, betaI, beta II, gamma) which require phospholipids and calcium, group 2 (delta, epsilon, theta, eta) which do not require calcium for activation, and group 3 (xi, iota/lambda) which are atypical and can be activated in the absence of diacylglycerol and calcium. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transd
Probab=99.42 E-value=1.7e-13 Score=128.73 Aligned_cols=115 Identities=21% Similarity=0.241 Sum_probs=94.2
Q ss_pred ccceeEEEEeec-CCccccCCCCCCcceEEEecCCCCCcccceeeecccCCCcceeeeeecccccccCcccccccccccc
Q 004954 264 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAEKDLMPAEID 342 (722)
Q Consensus 264 s~~~l~v~l~e~-~L~~~d~~g~sDpyvk~~l~~d~~~~~k~kt~~~k~tlnP~~nE~f~f~~~v~~~~~~~~L~~~V~D 342 (722)
....|+|.|.+| ||++.|..|..||||++.+.+++....+++|+++++++||.|||+|.|. +.....+..|.++|||
T Consensus 11 ~~~~l~v~i~~a~nL~~~~~~~~~dpyv~v~~~~~~~~~~~~rT~v~~~~~~P~wne~f~~~--~~~~~~~~~l~v~v~d 88 (131)
T cd04026 11 KDNKLTVEVREAKNLIPMDPNGLSDPYVKLKLIPDPKNETKQKTKTIKKTLNPVWNETFTFD--LKPADKDRRLSIEVWD 88 (131)
T ss_pred CCCEEEEEEEEeeCCCCcCCCCCCCCcEEEEEEcCCCCCceecceeecCCCCCCccceEEEe--CCchhcCCEEEEEEEE
Confidence 347899999999 9999999999999999999887766678899999999999999999999 6655455669999999
Q ss_pred cCCCCCCccccccccCccccccccCCCcchhhhhhhHhHhhh
Q 004954 343 NSDTRDGEVNGALHEGKADAEEHGVATPDLLMFDNLEEECEI 384 (722)
Q Consensus 343 ~D~~~~~d~iG~v~~~~~~~~~e~~~~~~~l~f~~L~ee~~~ 384 (722)
++.+++++++|.+.++..+........ |+....+....
T Consensus 89 ~~~~~~~~~iG~~~~~l~~l~~~~~~~----w~~L~~~~~~~ 126 (131)
T cd04026 89 WDRTTRNDFMGSLSFGVSELIKMPVDG----WYKLLNQEEGE 126 (131)
T ss_pred CCCCCCcceeEEEEEeHHHhCcCccCc----eEECcCccccc
Confidence 999999999999999877666543333 55555544433
No 485
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.42 E-value=3.1e-12 Score=132.73 Aligned_cols=133 Identities=17% Similarity=0.192 Sum_probs=96.9
Q ss_pred Eec-cCCCCceEEEEECCCCcEEEEEEeecch--------------hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEE
Q 004954 421 YLG-SAAFSKVFQAQDLHTGVDVCLKIIKNDK--------------DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYF 485 (722)
Q Consensus 421 ~LG-~G~fG~Vy~a~d~~tg~~vAvKil~~~~--------------~~~~~~~~E~~il~~L~~~~~~~hpnIv~l~~~f 485 (722)
.|| .||.|+||.+.. .+..++||.+.... ....+..+|+.++..+.+.. ..+++.+++.
T Consensus 38 ~lg~~~g~gtv~~v~~--~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~g----i~vP~pl~~~ 111 (239)
T PRK01723 38 VVGSAKGRGTTWFVQT--PGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAG----LPVPRPIAAR 111 (239)
T ss_pred eeecCCCCccEEEEEe--CCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCC----CCCceeEeee
Confidence 577 889999999975 47889999875311 12245678999999997642 2346666664
Q ss_pred EecC----eEEEEEEcccc--chHHHHhhhhccCCCcccCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCceEEcccCC
Q 004954 486 YHLE----HLFIVCELLRA--NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQR 559 (722)
Q Consensus 486 ~~~~----~l~iVmEy~~g--sLl~~l~~~~~~~~~~~ls~~~i~~i~~qIl~aL~yLHs~gIvHrDLKp~NILl~~~~~ 559 (722)
.... ..++|||+++| +|.+++... .++.. .+.||+.+|.+||+.||+|+||||.|||++. +
T Consensus 112 ~~~~~~~~~~~lV~e~l~G~~~L~~~l~~~-------~l~~~----~~~~i~~~l~~lH~~GI~HrDlkp~NILv~~--~ 178 (239)
T PRK01723 112 VVRHGLFYRADILIERIEGARDLVALLQEA-------PLSEE----QWQAIGQLIARFHDAGVYHADLNAHNILLDP--D 178 (239)
T ss_pred eeecCcceeeeEEEEecCCCCCHHHHHhcC-------CCCHH----HHHHHHHHHHHHHHCCCCCCCCCchhEEEcC--C
Confidence 4322 23699999986 455554321 14433 3578999999999999999999999999986 5
Q ss_pred CeEEEEecCCccc
Q 004954 560 CEIKIIDLGSSCF 572 (722)
Q Consensus 560 ~~vkL~DFGls~~ 572 (722)
+.++|+|||.+..
T Consensus 179 ~~v~LIDfg~~~~ 191 (239)
T PRK01723 179 GKFWLIDFDRGEL 191 (239)
T ss_pred CCEEEEECCCccc
Confidence 6899999998865
No 486
>cd04042 C2A_MCTP_PRT C2 domain first repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP). MCTPs are involved in Ca2+ signaling at the membrane. MCTP is composed of a variable N-terminal sequence, three C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular protein
Probab=99.41 E-value=1.9e-13 Score=126.57 Aligned_cols=89 Identities=12% Similarity=0.063 Sum_probs=76.5
Q ss_pred eeEEEEeec-CCccccCCCCCCcceEEEecCCCCCcccceeeecccCCCcceeeeeecccccccCcccccccccccccCC
Q 004954 267 YGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAEKDLMPAEIDNSD 345 (722)
Q Consensus 267 ~l~v~l~e~-~L~~~d~~g~sDpyvk~~l~~d~~~~~k~kt~~~k~tlnP~~nE~f~f~~~v~~~~~~~~L~~~V~D~D~ 345 (722)
.|+|.|++| ||+++|.+|.+||||++.+.. ...++|+++++|+||+|||+|.|. +.. ....|.++|||+|.
T Consensus 1 ~L~v~v~~a~~L~~~d~~g~~Dpyv~v~~~~----~~~~kT~~~~~t~nP~Wne~f~f~--v~~--~~~~l~~~v~D~d~ 72 (121)
T cd04042 1 QLDIHLKEGRNLAARDRGGTSDPYVKFKYGG----KTVYKSKTIYKNLNPVWDEKFTLP--IED--VTQPLYIKVFDYDR 72 (121)
T ss_pred CeEEEEEEeeCCCCcCCCCCCCCeEEEEECC----EEEEEeeeccCCCCCccceeEEEE--ecC--CCCeEEEEEEeCCC
Confidence 378999999 999999999999999999842 246788889999999999999998 542 34569999999999
Q ss_pred CCCCccccccccCccccc
Q 004954 346 TRDGEVNGALHEGKADAE 363 (722)
Q Consensus 346 ~~~~d~iG~v~~~~~~~~ 363 (722)
+++++++|.+.+...+..
T Consensus 73 ~~~~~~iG~~~~~l~~l~ 90 (121)
T cd04042 73 GLTDDFMGSAFVDLSTLE 90 (121)
T ss_pred CCCCcceEEEEEEHHHcC
Confidence 999999999998776544
No 487
>cd08379 C2D_MCTP_PRT_plant C2 domain fourth repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset. MCTPs are involved in Ca2+ signaling at the membrane. Plant-MCTPs are composed of a variable N-terminal sequence, four C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphate
Probab=99.40 E-value=2e-13 Score=127.32 Aligned_cols=87 Identities=15% Similarity=0.039 Sum_probs=73.6
Q ss_pred eEEEEeec-C---CccccCCCCCCcceEEEecCCCCCcccceeeecccCCCcceeeeeecccccccCccccccccccccc
Q 004954 268 GYLSSKEA-D---LIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAEKDLMPAEIDN 343 (722)
Q Consensus 268 l~v~l~e~-~---L~~~d~~g~sDpyvk~~l~~d~~~~~k~kt~~~k~tlnP~~nE~f~f~~~v~~~~~~~~L~~~V~D~ 343 (722)
|+|.|.+| | |.++|..|.+||||++.+- .++.+|+++++++||+|||+|.|. +.. ....|.++|||+
T Consensus 2 L~v~v~~A~~~~~l~~~d~~g~sDPYv~i~~g-----~~~~rTk~~~~~~nP~WnE~f~f~--v~~--~~~~l~v~V~d~ 72 (126)
T cd08379 2 LEVGILGAQGLDVLRAKDGRGSTDAYCVAKYG-----PKWVRTRTVEDSSNPRWNEQYTWP--VYD--PCTVLTVGVFDN 72 (126)
T ss_pred eEEEEEEeECCccccccccCCCCCeeEEEEEC-----CEEeEcCcccCCCCCcceeEEEEE--ecC--CCCEEEEEEEEC
Confidence 78999999 9 9999999999999999983 236789999999999999999998 542 223699999999
Q ss_pred CCCC------CCccccccccCccccc
Q 004954 344 SDTR------DGEVNGALHEGKADAE 363 (722)
Q Consensus 344 D~~~------~~d~iG~v~~~~~~~~ 363 (722)
+.++ +++++|++.+......
T Consensus 73 d~~~~~~~~~~dd~lG~~~i~l~~l~ 98 (126)
T cd08379 73 SQSHWKEAVQPDVLIGKVRIRLSTLE 98 (126)
T ss_pred CCccccccCCCCceEEEEEEEHHHcc
Confidence 9884 7999999988755443
No 488
>cd04019 C2C_MCTP_PRT_plant C2 domain third repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset. MCTPs are involved in Ca2+ signaling at the membrane. Plant-MCTPs are composed of a variable N-terminal sequence, four C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates
Probab=99.40 E-value=2.1e-13 Score=131.25 Aligned_cols=90 Identities=20% Similarity=0.146 Sum_probs=76.4
Q ss_pred eeEEEEeec-CCccccCCCCCCcceEEEecCCCCCcccceeeeccc-CCCcceeeeeecccccccCcccccccccccccC
Q 004954 267 YGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKR-GSSIDWIEGFKGSSDLHFKGAEKDLMPAEIDNS 344 (722)
Q Consensus 267 ~l~v~l~e~-~L~~~d~~g~sDpyvk~~l~~d~~~~~k~kt~~~k~-tlnP~~nE~f~f~~~v~~~~~~~~L~~~V~D~D 344 (722)
+|+|.|.+| ||+++|.+|.+||||++.+.. .+.||+++++ |+||+|||+|.|. ++.. ....|.+.|||++
T Consensus 1 ~L~V~Vi~A~~L~~~d~~g~sDPYV~v~l~~-----~~~kTk~~~~~t~nP~WNE~F~f~--v~~~-~~~~l~v~V~d~~ 72 (150)
T cd04019 1 YLRVTVIEAQDLVPSDKNRVPEVFVKAQLGN-----QVLRTRPSQTRNGNPSWNEELMFV--AAEP-FEDHLILSVEDRV 72 (150)
T ss_pred CEEEEEEEeECCCCCCCCCCCCeEEEEEECC-----EEeeeEeccCCCCCCcccCcEEEE--ecCc-cCCeEEEEEEEec
Confidence 689999999 999999999999999999963 4667877655 7999999999998 6532 2345899999999
Q ss_pred CCCCCccccccccCcccccc
Q 004954 345 DTRDGEVNGALHEGKADAEE 364 (722)
Q Consensus 345 ~~~~~d~iG~v~~~~~~~~~ 364 (722)
..++++++|.+.++..+...
T Consensus 73 ~~~~dd~lG~v~i~L~~l~~ 92 (150)
T cd04019 73 GPNKDEPLGRAVIPLNDIER 92 (150)
T ss_pred CCCCCCeEEEEEEEHHHCcc
Confidence 99999999999998876644
No 489
>cd04033 C2_NEDD4_NEDD4L C2 domain present in the Human neural precursor cell-expressed, developmentally down-regulated 4 (NEDD4) and NEDD4-like (NEDD4L/NEDD42). Nedd4 and Nedd4-2 are two of the nine members of the Human Nedd4 family. All vertebrates appear to have both Nedd4 and Nedd4-2 genes. They are thought to participate in the regulation of epithelial Na+ channel (ENaC) activity. They also have identical specificity for ubiquitin conjugating enzymes (E2). Nedd4 and Nedd4-2 are composed of a C2 domain, 2-4 WW domains, and a ubiquitin ligase Hect domain. Their WW domains can bind PPxY (PY) or LPSY motifs, and in vitro studies suggest that WW3 and WW4 of both proteins bind PY motifs in the key substrates, with WW3 generally exhibiting higher affinity. Most Nedd4 family members, especially Nedd4-2, also have multiple splice variants, which might play different roles in regulating their substrates. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen
Probab=99.40 E-value=3.2e-13 Score=127.02 Aligned_cols=95 Identities=15% Similarity=0.098 Sum_probs=80.3
Q ss_pred eeEEEEeec-CCccccCCCCCCcceEEEecCCC--CCcccceeeecccCCCcceeeeeecccccccCccccccccccccc
Q 004954 267 YGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHP--GTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAEKDLMPAEIDN 343 (722)
Q Consensus 267 ~l~v~l~e~-~L~~~d~~g~sDpyvk~~l~~d~--~~~~k~kt~~~k~tlnP~~nE~f~f~~~v~~~~~~~~L~~~V~D~ 343 (722)
.|+|.|.+| ||+++|..|.+||||++.+...+ +...+.+|+++++|+||.|||+|.|. ++.. +..|.++|||+
T Consensus 1 ~L~v~Vi~a~~L~~~d~~~~~Dpyv~v~~~~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~--~~~~--~~~l~~~v~d~ 76 (133)
T cd04033 1 ILRVKVLAGIDLAKKDIFGASDPYVKISLYDPDGNGEIDSVQTKTIKKTLNPKWNEEFFFR--VNPR--EHRLLFEVFDE 76 (133)
T ss_pred CEEEEEEEeECCCcccCCCCcCcEEEEEEECCCCCCcccceeeeEEcCCCCCcEeeEEEEE--EcCC--CCEEEEEEEEC
Confidence 378999999 99999999999999999998652 23346789999999999999999998 6543 34589999999
Q ss_pred CCCCCCccccccccCccccccc
Q 004954 344 SDTRDGEVNGALHEGKADAEEH 365 (722)
Q Consensus 344 D~~~~~d~iG~v~~~~~~~~~e 365 (722)
+.+++++++|.+.+...+....
T Consensus 77 ~~~~~~~~iG~~~i~l~~l~~~ 98 (133)
T cd04033 77 NRLTRDDFLGQVEVPLNNLPTE 98 (133)
T ss_pred CCCCCCCeeEEEEEEHHHCCCc
Confidence 9999999999999887665544
No 490
>KOG1030 consensus Predicted Ca2+-dependent phospholipid-binding protein [General function prediction only]
Probab=99.39 E-value=4.1e-13 Score=127.97 Aligned_cols=86 Identities=12% Similarity=0.051 Sum_probs=75.6
Q ss_pred cceeEEEEeec-CCccccCCCCCCcceEEEecCCCCCcccceeeecccCCCcceeeeeecccccccCccccccccccccc
Q 004954 265 NDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAEKDLMPAEIDN 343 (722)
Q Consensus 265 ~~~l~v~l~e~-~L~~~d~~g~sDpyvk~~l~~d~~~~~k~kt~~~k~tlnP~~nE~f~f~~~v~~~~~~~~L~~~V~D~ 343 (722)
.+-|+|.|+.+ ||...|+.|.|||||-+.+- ..|.||++.++++||+|||.|+|. + .+....|.++|||+
T Consensus 5 vGLL~v~v~~g~~L~~rD~~~sSDPyVVl~lg-----~q~lkT~~v~~n~NPeWNe~ltf~--v--~d~~~~lkv~VyD~ 75 (168)
T KOG1030|consen 5 VGLLRVRVKRGKNLAIRDFLGSSDPYVVLELG-----NQKLKTRVVYKNLNPEWNEELTFT--V--KDPNTPLKVTVYDK 75 (168)
T ss_pred ceEEEEEEEeecCeeeeccccCCCCeEEEEEC-----CeeeeeeeecCCCCCcccceEEEE--e--cCCCceEEEEEEeC
Confidence 36789999999 99999999999999999995 458889999999999999999987 3 44456699999999
Q ss_pred CCCCCCccccccccCc
Q 004954 344 SDTRDGEVNGALHEGK 359 (722)
Q Consensus 344 D~~~~~d~iG~v~~~~ 359 (722)
|.++..|++|+..+..
T Consensus 76 D~fs~dD~mG~A~I~l 91 (168)
T KOG1030|consen 76 DTFSSDDFMGEATIPL 91 (168)
T ss_pred CCCCcccccceeeecc
Confidence 9999999999986643
No 491
>cd08676 C2A_Munc13-like C2 domain first repeat in Munc13 (mammalian uncoordinated)-like proteins. C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, sy
Probab=99.38 E-value=3.6e-13 Score=129.75 Aligned_cols=99 Identities=14% Similarity=0.087 Sum_probs=80.4
Q ss_pred ccceeEEEEeec-CCccccCCCCCCcceEEEecCCCCCc------------------------ccceeeecccCCCccee
Q 004954 264 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTE------------------------KSSSYSSSKRGSSIDWI 318 (722)
Q Consensus 264 s~~~l~v~l~e~-~L~~~d~~g~sDpyvk~~l~~d~~~~------------------------~k~kt~~~k~tlnP~~n 318 (722)
+...|+|.|.+| ||.++|.+|.+||||++.+.+..++. ..++|.++++|+||.||
T Consensus 26 ~~~~L~V~vi~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kT~v~~~tlnP~Wn 105 (153)
T cd08676 26 PIFVLKVTVIEAKGLLAKDVNGFSDPYCMLGIVPASRERNSEKSKKRKSHRKKAVLKDTVPAKSIKVTEVKPQTLNPVWN 105 (153)
T ss_pred CeEEEEEEEEeccCCcccCCCCCCCceEEEEEcccccccccccccccccccccccccccccccccEecceecCCCCCccc
Confidence 457899999999 99999999999999999998753321 23678889999999999
Q ss_pred eeeecccccccCcccccccccccccCCCCCCccccccccCccccccccCCC
Q 004954 319 EGFKGSSDLHFKGAEKDLMPAEIDNSDTRDGEVNGALHEGKADAEEHGVAT 369 (722)
Q Consensus 319 E~f~f~~~v~~~~~~~~L~~~V~D~D~~~~~d~iG~v~~~~~~~~~e~~~~ 369 (722)
|+|.|. +... .+..|.++|||++ ++++|++.+...++...+...
T Consensus 106 E~F~f~--v~~~-~~~~L~i~V~D~d----d~~IG~v~i~l~~l~~~~~d~ 149 (153)
T cd08676 106 ETFRFE--VEDV-SNDQLHLDIWDHD----DDFLGCVNIPLKDLPSCGLDS 149 (153)
T ss_pred cEEEEE--eccC-CCCEEEEEEEecC----CCeEEEEEEEHHHhCCCCCCC
Confidence 999998 5432 2455999999998 899999999887776444443
No 492
>cd08374 C2F_Ferlin C2 domain sixth repeat in Ferlin. Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen
Probab=99.38 E-value=3.5e-13 Score=126.27 Aligned_cols=90 Identities=13% Similarity=0.006 Sum_probs=76.8
Q ss_pred eEEEEeec-CCc--cccCCCC--CCcceEEEecCCCCCcccceeeecccCCC--cceeeeeeccccccc-----------
Q 004954 268 GYLSSKEA-DLI--DLQHNVV--GDSSTDCDLAPHPGTEKSSSYSSSKRGSS--IDWIEGFKGSSDLHF----------- 329 (722)
Q Consensus 268 l~v~l~e~-~L~--~~d~~g~--sDpyvk~~l~~d~~~~~k~kt~~~k~tln--P~~nE~f~f~~~v~~----------- 329 (722)
|||+|-+| |++ .++.+|. ||||||++|.+. ...|+||.||.+++| |.||+.|.|. ++.
T Consensus 2 LRViIw~~~~v~~~~~~~~g~~~sD~yVK~~L~~~--~~~kqkTDVHyrslnG~~~FNwRfvF~--~~~~~~~~~~~~~~ 77 (133)
T cd08374 2 LRVIVWNTRDVLNDDTNITGEKMSDIYVKGWLDGL--EEDKQKTDVHYRSLDGEGNFNWRFVFP--FDYLPAEKKIVVIK 77 (133)
T ss_pred EEEEEEECcCCcccccccCCccccCeEEEEEEccC--cccccccceEEecCCCCcEEeEEEEEe--eecCCccceeEEEe
Confidence 79999999 955 4556885 999999999997 456999999999999 9999999998 555
Q ss_pred ----------Ccc-cccccccccccCCCCCCccccccccCccc
Q 004954 330 ----------KGA-EKDLMPAEIDNSDTRDGEVNGALHEGKAD 361 (722)
Q Consensus 330 ----------~~~-~~~L~~~V~D~D~~~~~d~iG~v~~~~~~ 361 (722)
+.+ ..+|.++|||.|++++++++|++.++...
T Consensus 78 ~~~~~~~~~~e~~~~~~L~lqvwD~D~~s~dd~iG~~~l~l~~ 120 (133)
T cd08374 78 KEHFWSLDETEYKIPPKLTLQVWDNDKFSPDDFLGSLELDLSI 120 (133)
T ss_pred eccccccCcceEecCcEEEEEEEECcccCCCCcceEEEEEhhh
Confidence 445 45599999999999999999999887653
No 493
>cd08375 C2_Intersectin C2 domain present in Intersectin. A single instance of the C2 domain is located C terminally in the intersectin protein. Intersectin functions as a scaffolding protein, providing a link between the actin cytoskeleton and the components of endocytosis and plays a role in signal transduction. In addition to C2, intersectin contains several additional domains including: Eps15 homology domains, SH3 domains, a RhoGEF domain, and a PH domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking pro
Probab=99.38 E-value=4.7e-13 Score=126.78 Aligned_cols=93 Identities=12% Similarity=0.017 Sum_probs=79.6
Q ss_pred ccceeEEEEeec-CCccccCCCCCCcceEEEecCCCCCcccceeeecccCCCcceeeeeecccccccCcccccccccccc
Q 004954 264 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAEKDLMPAEID 342 (722)
Q Consensus 264 s~~~l~v~l~e~-~L~~~d~~g~sDpyvk~~l~~d~~~~~k~kt~~~k~tlnP~~nE~f~f~~~v~~~~~~~~L~~~V~D 342 (722)
..+.|+|.|++| +|+++|..|.+||||++.+. ..+++|+++++|+||.|||+|.|. +... ....|.++|||
T Consensus 13 ~~G~L~V~Vi~A~~L~~~d~~g~~DPYv~v~~~-----~~~~kT~vi~~t~nP~Wne~f~f~--v~~~-~~~~l~i~V~D 84 (136)
T cd08375 13 GIGRLMVVIVEGRDLKPCNSNGKSDPYCEVSMG-----SQEHKTKVVSDTLNPKWNSSMQFF--VKDL-EQDVLCITVFD 84 (136)
T ss_pred CcEEEEEEEEEeeCCCCCCCCCCcCcEEEEEEC-----CEeeeccccCCCCCCccCceEEEE--ecCc-cCCEEEEEEEE
Confidence 557899999999 99999999999999999983 346889999999999999999998 6432 23459999999
Q ss_pred cCCCCCCccccccccCcccccc
Q 004954 343 NSDTRDGEVNGALHEGKADAEE 364 (722)
Q Consensus 343 ~D~~~~~d~iG~v~~~~~~~~~ 364 (722)
+|.+++++++|.+.+...+...
T Consensus 85 ~d~~~~d~~lG~~~i~l~~l~~ 106 (136)
T cd08375 85 RDFFSPDDFLGRTEIRVADILK 106 (136)
T ss_pred CCCCCCCCeeEEEEEEHHHhcc
Confidence 9999999999999887765554
No 494
>cd04043 C2_Munc13_fungal C2 domain in Munc13 (mammalian uncoordinated) proteins; fungal group. C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, synap
Probab=99.37 E-value=4.6e-13 Score=124.73 Aligned_cols=91 Identities=11% Similarity=-0.040 Sum_probs=77.3
Q ss_pred eeEEEEeec-CCccccCCCCCCcceEEEecCCCCCcccceeeecccCCCcceeeeeecccccccCcccccccccccccCC
Q 004954 267 YGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAEKDLMPAEIDNSD 345 (722)
Q Consensus 267 ~l~v~l~e~-~L~~~d~~g~sDpyvk~~l~~d~~~~~k~kt~~~k~tlnP~~nE~f~f~~~v~~~~~~~~L~~~V~D~D~ 345 (722)
.++|.|.+| ||+++|.+|.+||||++++...+ ..+.||+++++++||.|||+|.|. ++.. ....|.++|||++.
T Consensus 2 ~~~V~v~~a~~L~~~~~~~~~Dpyv~v~~~~~~--~~~~kT~~~~~t~~P~Wne~f~f~--i~~~-~~~~L~i~v~d~d~ 76 (126)
T cd04043 2 LFTIRIVRAENLKADSSNGLSDPYVTLVDTNGK--RRIAKTRTIYDTLNPRWDEEFELE--VPAG-EPLWISATVWDRSF 76 (126)
T ss_pred EEEEEEEEeECCCCCCCCCCCCceEEEEECCCC--eeeecccEecCCCCCcccceEEEE--cCCC-CCCEEEEEEEECCC
Confidence 588999999 99999999999999999875432 346789899999999999999999 6654 34559999999999
Q ss_pred CCCCccccccccCcccc
Q 004954 346 TRDGEVNGALHEGKADA 362 (722)
Q Consensus 346 ~~~~d~iG~v~~~~~~~ 362 (722)
+++++++|++.+.....
T Consensus 77 ~~~~~~iG~~~i~l~~~ 93 (126)
T cd04043 77 VGKHDLCGRASLKLDPK 93 (126)
T ss_pred CCCCceEEEEEEecCHH
Confidence 99999999998876543
No 495
>cd04037 C2E_Ferlin C2 domain fifth repeat in Ferlin. Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen
Probab=99.36 E-value=7.3e-13 Score=123.43 Aligned_cols=87 Identities=11% Similarity=-0.031 Sum_probs=73.1
Q ss_pred eEEEEeec-CCccccCCCCCCcceEEEecCCCCCcccceeeecccCCCcceeeeeecccccccCcccccccccccccCCC
Q 004954 268 GYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAEKDLMPAEIDNSDT 346 (722)
Q Consensus 268 l~v~l~e~-~L~~~d~~g~sDpyvk~~l~~d~~~~~k~kt~~~k~tlnP~~nE~f~f~~~v~~~~~~~~L~~~V~D~D~~ 346 (722)
++|.|.+| +|+++|..|.+||||++.+...+ .+.||.++++|+||+|||+|.|. +.... ...|.++|||+|.+
T Consensus 2 lrV~Vi~a~~L~~~d~~g~~DPYv~v~~~~~~---~~~kT~~v~~t~nP~Wne~f~f~--~~~~~-~~~L~~~V~d~d~~ 75 (124)
T cd04037 2 VRVYVVRARNLQPKDPNGKSDPYLKIKLGKKK---INDRDNYIPNTLNPVFGKMFELE--ATLPG-NSILKISVMDYDLL 75 (124)
T ss_pred EEEEEEECcCCCCCCCCCCCCcEEEEEECCee---ccceeeEEECCCCCccceEEEEE--ecCCC-CCEEEEEEEECCCC
Confidence 78999999 99999999999999999995432 34677778899999999999998 43221 34599999999999
Q ss_pred CCCccccccccCcc
Q 004954 347 RDGEVNGALHEGKA 360 (722)
Q Consensus 347 ~~~d~iG~v~~~~~ 360 (722)
++++++|++.+...
T Consensus 76 ~~dd~iG~~~i~l~ 89 (124)
T cd04037 76 GSDDLIGETVIDLE 89 (124)
T ss_pred CCCceeEEEEEeec
Confidence 99999999988664
No 496
>cd04024 C2A_Synaptotagmin-like C2 domain first repeat present in Synaptotagmin-like proteins. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permu
Probab=99.35 E-value=7.1e-13 Score=123.60 Aligned_cols=90 Identities=10% Similarity=-0.027 Sum_probs=77.3
Q ss_pred ceeEEEEeec-CCccccC--CCCCCcceEEEecCCCCCcccceeeecccCCCcceeeeeecccccccCcccccccccccc
Q 004954 266 DYGYLSSKEA-DLIDLQH--NVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAEKDLMPAEID 342 (722)
Q Consensus 266 ~~l~v~l~e~-~L~~~d~--~g~sDpyvk~~l~~d~~~~~k~kt~~~k~tlnP~~nE~f~f~~~v~~~~~~~~L~~~V~D 342 (722)
+.|+|.|.+| ||+++|. .|.+||||++++- ..+.+|+++++|+||.|||+|.|. +.. .....|.++|||
T Consensus 1 g~l~v~v~~a~~L~~~~~~~~~~~dPyv~v~~~-----~~~~kT~~~~~t~~P~Wne~f~~~--~~~-~~~~~l~i~v~d 72 (128)
T cd04024 1 GVLRVHVVEAKDLAAKDRSGKGKSDPYAILSVG-----AQRFKTQTIPNTLNPKWNYWCEFP--IFS-AQNQLLKLILWD 72 (128)
T ss_pred CEEEEEEEEeeCCCcccCCCCCCcCCeEEEEEC-----CEEEecceecCCcCCccCCcEEEE--ecC-CCCCEEEEEEEE
Confidence 3588999999 9999999 8999999999983 246789999999999999999998 654 234569999999
Q ss_pred cCCCCCCccccccccCccccc
Q 004954 343 NSDTRDGEVNGALHEGKADAE 363 (722)
Q Consensus 343 ~D~~~~~d~iG~v~~~~~~~~ 363 (722)
++.+++++++|.+.+...+..
T Consensus 73 ~~~~~~~~~lG~~~i~l~~~~ 93 (128)
T cd04024 73 KDRFAGKDYLGEFDIALEEVF 93 (128)
T ss_pred CCCCCCCCcceEEEEEHHHhh
Confidence 999999999999999876654
No 497
>cd04017 C2D_Ferlin C2 domain fourth repeat in Ferlin. Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangeme
Probab=99.35 E-value=1.1e-12 Score=124.15 Aligned_cols=86 Identities=14% Similarity=0.038 Sum_probs=71.7
Q ss_pred eeEEEEeec-CCccccCCCCCCcceEEEecCCCCCcccceeeecccCCCcceeeeeecccc-cc--cCcc---ccccccc
Q 004954 267 YGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSD-LH--FKGA---EKDLMPA 339 (722)
Q Consensus 267 ~l~v~l~e~-~L~~~d~~g~sDpyvk~~l~~d~~~~~k~kt~~~k~tlnP~~nE~f~f~~~-v~--~~~~---~~~L~~~ 339 (722)
+|+|.|.+| +|+++|.+|.+|||||+.+. ..++||+++++|+||+|||+|.|... +. .+.. ...|.++
T Consensus 2 ~l~v~V~~a~~L~~~d~~g~~dpyv~v~~~-----~~~~kT~v~~~t~nP~Wne~~~f~~~~~~~~~~~~~~~~~~l~v~ 76 (135)
T cd04017 2 QLRAYIYQARDLLAADKSGLSDPFARVSFL-----NQSQETEVIKETLSPTWDQTLIFDEVELYGSPEEIAQNPPLVVVE 76 (135)
T ss_pred EEEEEEEEeecCcCCCCCCCCCCEEEEEEC-----CeeeEeeeEcCCCCCccCcEEEEeeeeccCChHHhhcCCCEEEEE
Confidence 588999999 99999999999999999985 24678999999999999999999721 11 1111 2348899
Q ss_pred ccccCCCCCCcccccccc
Q 004954 340 EIDNSDTRDGEVNGALHE 357 (722)
Q Consensus 340 V~D~D~~~~~d~iG~v~~ 357 (722)
|||+|.+++++++|++..
T Consensus 77 V~d~d~~~~d~~iG~~~i 94 (135)
T cd04017 77 LFDQDSVGKDEFLGRSVA 94 (135)
T ss_pred EEeCcCCCCCccceEEEe
Confidence 999999999999999975
No 498
>cd08681 C2_fungal_Inn1p-like C2 domain found in fungal Ingression 1 (Inn1) proteins. Saccharomyces cerevisiae Inn1 associates with the contractile actomyosin ring at the end of mitosis and is needed for cytokinesis. The C2 domain of Inn1, located at the N-terminus, is required for ingression of the plasma membrane. The C-terminus is relatively unstructured and contains eight PXXP motifs that are thought to mediate interaction of Inn1 with other proteins with SH3 domains in the cytokinesis proteins Hof1 (an F-BAR protein) and Cyk3 (whose overexpression can restore primary septum formation in Inn1Delta cells) as well as recruiting Inn1 to the bud-neck by binding to Cyk3. Inn1 and Cyk3 appear to cooperate in activating chitin synthase Chs2 for primary septum formation, which allows coordination of actomyosin ring contraction with ingression of the cleavage furrow. It is thought that the C2 domain of Inn1 helps to preserve the link between the actomyosin ring and the plasma membrane, contr
Probab=99.34 E-value=9.2e-13 Score=121.30 Aligned_cols=90 Identities=12% Similarity=0.089 Sum_probs=74.5
Q ss_pred ceeEEEEeec-CCccccCCCCCCcceEEEecCCCCCcccceeeec-ccCCCcceeeeeecccccccCccccccccccccc
Q 004954 266 DYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSS-KRGSSIDWIEGFKGSSDLHFKGAEKDLMPAEIDN 343 (722)
Q Consensus 266 ~~l~v~l~e~-~L~~~d~~g~sDpyvk~~l~~d~~~~~k~kt~~~-k~tlnP~~nE~f~f~~~v~~~~~~~~L~~~V~D~ 343 (722)
+.|+|.|.+| ||+++|..|.+||||++.+.. .+++|+++ +.++||+|||+|.|. ++.. ....|.++|||+
T Consensus 1 g~L~V~v~~A~~L~~~~~~~~~dpyv~v~~~~-----~~~kT~~~~~~~~nP~Wne~f~f~--v~~~-~~~~l~i~v~d~ 72 (118)
T cd08681 1 GTLVVVVLKARNLPNKRKLDKQDPYCVLRIGG-----VTKKTKTDFRGGQHPEWDEELRFE--ITED-KKPILKVAVFDD 72 (118)
T ss_pred CEEEEEEEEccCCCCCCcCCCCCceEEEEECC-----CccccccccCCCCCCccCceEEEE--ecCC-CCCEEEEEEEeC
Confidence 4689999999 999999999999999999854 35567665 568999999999998 7654 334599999999
Q ss_pred CCCCCCccccccccCcccccc
Q 004954 344 SDTRDGEVNGALHEGKADAEE 364 (722)
Q Consensus 344 D~~~~~d~iG~v~~~~~~~~~ 364 (722)
+..+ ++++|++.++..+...
T Consensus 73 ~~~~-~~~iG~~~~~l~~~~~ 92 (118)
T cd08681 73 DKRK-PDLIGDTEVDLSPALK 92 (118)
T ss_pred CCCC-CcceEEEEEecHHHhh
Confidence 9887 8999999988765533
No 499
>cd04054 C2A_Rasal1_RasA4 C2 domain first repeat present in RasA1 and RasA4. Rasal1 and RasA4 are both members of GAP1 (GTPase activating protein 1). Rasal1 responds to repetitive Ca2+ signals by associating with the plasma membrane and deactivating Ras. RasA4 suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. Both of these proteins contains two C2 domains, a Ras-GAP domain, a plextrin homology (PH)-like domain, and a Bruton's Tyrosine Kinase (BTK) zinc binding domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins.
Probab=99.34 E-value=9.7e-13 Score=122.01 Aligned_cols=87 Identities=13% Similarity=0.024 Sum_probs=74.2
Q ss_pred eEEEEeec-CCccccCCCCCCcceEEEecCCCCCcccceeeecccCCCcceeeeeecccccccCcccccccccccccCCC
Q 004954 268 GYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAEKDLMPAEIDNSDT 346 (722)
Q Consensus 268 l~v~l~e~-~L~~~d~~g~sDpyvk~~l~~d~~~~~k~kt~~~k~tlnP~~nE~f~f~~~v~~~~~~~~L~~~V~D~D~~ 346 (722)
|+|.|.+| +|+++|.+|.+||||++.+- + ....||+++++|+||+|||.|.|. ++.. .+.|.+.|||++.+
T Consensus 2 l~v~vi~a~~L~~~d~~g~~DPYv~v~~~--~--~~~~kT~v~~~t~nP~Wne~f~~~--~~~~--~~~l~v~v~d~~~~ 73 (121)
T cd04054 2 LYIRIVEGKNLPAKDITGSSDPYCIVKVD--N--EVIIRTATVWKTLNPFWGEEYTVH--LPPG--FHTVSFYVLDEDTL 73 (121)
T ss_pred EEEEEEEeeCCcCCCCCCCCCceEEEEEC--C--EeeeeeeeEcCCCCCcccceEEEe--eCCC--CCEEEEEEEECCCC
Confidence 78999999 99999999999999999983 2 234689899999999999999998 5432 35699999999999
Q ss_pred CCCccccccccCcccc
Q 004954 347 RDGEVNGALHEGKADA 362 (722)
Q Consensus 347 ~~~d~iG~v~~~~~~~ 362 (722)
++++++|.+.++....
T Consensus 74 ~~d~~iG~~~~~~~~~ 89 (121)
T cd04054 74 SRDDVIGKVSLTREVI 89 (121)
T ss_pred CCCCEEEEEEEcHHHh
Confidence 9999999998875443
No 500
>cd04011 C2B_Ferlin C2 domain second repeat in Ferlin. Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangeme
Probab=99.34 E-value=1e-12 Score=119.89 Aligned_cols=90 Identities=13% Similarity=0.017 Sum_probs=74.8
Q ss_pred eeEEEEeec-CCccccCCCCCCcceEEEecCCCCCcccceeeecccCCCcceeeeeecccccccCcc-cccccccccccC
Q 004954 267 YGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPAEIDNS 344 (722)
Q Consensus 267 ~l~v~l~e~-~L~~~d~~g~sDpyvk~~l~~d~~~~~k~kt~~~k~tlnP~~nE~f~f~~~v~~~~~-~~~L~~~V~D~D 344 (722)
.++|.|.+| ||. +|..||||++.+.. +++||+++++++||.|||+|.|....+...+ +..|.++|||++
T Consensus 5 ~l~V~v~~a~~L~----~~~~dpyv~v~~~~-----~~~kT~~~~~t~nP~wne~f~f~~~~~~~~l~~~~l~i~V~d~~ 75 (111)
T cd04011 5 QVRVRVIEARQLV----GGNIDPVVKVEVGG-----QKKYTSVKKGTNCPFYNEYFFFNFHESPDELFDKIIKISVYDSR 75 (111)
T ss_pred EEEEEEEEcccCC----CCCCCCEEEEEECC-----EeeeeeEEeccCCCccccEEEEecCCCHHHHhcCeEEEEEEcCc
Confidence 678999999 998 78999999999972 3568999999999999999999833344333 455999999999
Q ss_pred CCCCCccccccccCccccccc
Q 004954 345 DTRDGEVNGALHEGKADAEEH 365 (722)
Q Consensus 345 ~~~~~d~iG~v~~~~~~~~~e 365 (722)
.+++++++|++.+........
T Consensus 76 ~~~~~~~iG~~~i~l~~v~~~ 96 (111)
T cd04011 76 SLRSDTLIGSFKLDVGTVYDQ 96 (111)
T ss_pred ccccCCccEEEEECCccccCC
Confidence 999999999999987665443
Done!