Query 004967
Match_columns 721
No_of_seqs 234 out of 560
Neff 5.9
Searched_HMMs 29240
Date Mon Mar 25 11:17:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004967.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004967hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2zws_A Neutral ceramidase; pri 100.0 2E-156 6E-161 1352.0 64.3 614 1-721 23-642 (646)
2 2p9r_A Alpha-2-M, alpha-2-macr 94.9 0.15 5.2E-06 44.6 9.9 88 611-721 10-97 (102)
3 4fxk_A Complement C4 beta chai 82.6 4.9 0.00017 45.8 10.8 81 602-699 120-200 (656)
4 2pn5_A TEP1R, thioester-contai 76.1 9.4 0.00032 47.7 11.1 85 602-700 100-184 (1325)
5 4acq_A Alpha-2-macroglobulin; 69.9 17 0.00058 46.1 11.3 86 600-700 102-187 (1451)
6 3hrz_A Cobra venom factor; ser 68.1 6.1 0.00021 45.6 6.4 78 602-699 104-181 (627)
7 2hr0_A Complement C3 beta chai 61.0 34 0.0012 39.1 10.9 83 602-699 106-188 (645)
8 3prx_B Cobra venom factor; imm 59.6 28 0.00095 44.7 10.5 80 601-700 125-204 (1642)
9 2c9r_A COPC, copper resistance 48.2 1.1E+02 0.0037 26.7 9.5 59 618-684 19-85 (102)
10 3cu7_A Complement C5; Mg domai 44.5 36 0.0012 43.7 8.1 81 601-699 123-205 (1676)
11 1lyq_A PCOC copper resistance 42.1 1.1E+02 0.0037 26.8 8.6 29 618-652 20-48 (104)
12 3zxn_A RSBS, anti-sigma-factor 35.6 64 0.0022 28.7 6.2 48 468-520 4-51 (123)
13 2b39_A C3; thioester, immune d 34.9 60 0.0021 41.6 7.9 83 602-699 127-209 (1661)
14 4eyb_A Beta-lactamase NDM-1; m 34.6 61 0.0021 32.5 6.5 49 20-77 75-123 (270)
15 1vra_A Arginine biosynthesis b 32.9 63 0.0021 32.1 6.0 46 19-74 89-136 (208)
16 3eja_A Protein GH61E; beta san 31.2 91 0.0031 30.9 6.9 24 679-702 118-141 (208)
17 2vtc_A CEL61B, cellulase; hydr 31.1 5.6 0.00019 40.7 -2.0 23 679-701 160-182 (249)
18 2dle_A Receptor-type tyrosine- 30.1 34 0.0012 29.5 3.3 25 676-700 22-48 (104)
19 4hl2_A Beta-lactamase NDM-1; s 30.0 1.1E+02 0.0037 29.7 7.4 51 18-77 46-96 (243)
20 2v94_A RPS24, 30S ribosomal pr 28.1 57 0.0019 29.1 4.3 45 34-80 27-71 (107)
21 1uiz_A MIF, macrophage migrati 27.2 70 0.0024 27.8 4.9 50 23-75 48-102 (115)
22 2xcz_A Possible ATLS1-like lig 27.2 2.7E+02 0.0094 23.8 8.8 84 44-130 16-102 (115)
23 1u9d_A Hypothetical protein VC 27.2 2.8E+02 0.0094 25.2 8.8 79 46-130 31-112 (122)
24 1xn9_A 30S ribosomal protein S 26.9 64 0.0022 28.5 4.4 35 44-80 28-62 (101)
25 1hfo_A Migration inhibitory fa 26.5 74 0.0025 27.5 4.9 51 22-75 46-101 (113)
26 2v4i_A Glutamate N-acetyltrans 26.0 59 0.002 31.4 4.3 46 19-74 58-105 (173)
27 1ywx_A 30S ribosomal protein S 25.5 67 0.0023 28.4 4.2 35 44-80 28-62 (102)
28 4ank_A Transthyretin; hormone 24.5 72 0.0025 30.0 4.5 41 641-698 51-94 (147)
29 1axh_A Atracotoxin-HVI, ACTX-H 23.9 32 0.0011 24.6 1.4 19 303-321 3-21 (37)
30 3djh_A Macrophage migration in 23.5 90 0.0031 27.3 4.8 49 22-73 46-99 (114)
31 2wkb_A Macrophage migration in 21.3 81 0.0028 28.0 4.1 44 30-75 54-102 (125)
32 3fwu_A Macrophage migration in 21.1 70 0.0024 29.1 3.7 44 30-75 75-123 (133)
33 2g1d_A 30S ribosomal protein S 20.1 58 0.002 28.6 2.7 35 44-80 29-63 (98)
No 1
>2zws_A Neutral ceramidase; prism fold and beta-sandwich fold, hydrolase, lipid metaboli secreted; HET: PLM; 1.40A {Pseudomonas aeruginosa} PDB: 2zxc_A*
Probab=100.00 E-value=1.8e-156 Score=1352.04 Aligned_cols=614 Identities=43% Similarity=0.716 Sum_probs=572.6
Q ss_pred CCcccCCCCccceeecceEEEEEEEEeC-CCCEEEEEEeccCcccHHHHHHHHHHHHHHhCCCCCCCcEEEEeeccCCCC
Q 004967 1 MMGYANMEQIASGIHFRLRARTFIVAEP-QGNRVVFVNLDACMASQIVKIKVIERLKARYGDLYTEKNVAISGIHTHAGP 79 (721)
Q Consensus 1 m~GYa~~~q~a~Gvhd~L~ARAlvl~d~-~~~rvv~Vs~Dl~~i~~~v~~~Vr~~L~~~~G~~i~~~nVlIsATHTHSgP 79 (721)
||||+.+.|+++|||||||||||||+++ +++|+|||++|++|+++.++++|+++|+++||++|+.+||+||+|||||||
T Consensus 23 m~GYa~~~q~a~Gihd~L~aRA~vl~d~~~~~rvv~Vs~D~~~~~~~v~~~V~~~L~~~~g~~~~~~nV~isaTHTHSgP 102 (646)
T 2zws_A 23 MMGYSSLEQKTAGIHMRQWARAFVIEEAASGRRLVYVNTDLGMIFQAVHLKVLARLKAKYPGVYDENNVMLAATHTHSGP 102 (646)
T ss_dssp EESSCCTTCEEEEESSCCEEEEEEEEESSSCCEEEEEEESSSCCCHHHHHHHHHHHHHHSTTTCCTTTEEEEECCBSBEE
T ss_pred ecCccccCccccceecceEEEEEEEEcCCCCCEEEEEEECcccCCHHHHHHHHHHHHHHhCCCCChhHEEEEeeeeCCCC
Confidence 8999999999999999999999999984 389999999999999999999999999999998899999999999999999
Q ss_pred CcCcccccccccccccchhHHHHHHHHHHHHHHHHHhcCCcEEEEEEEEEeccccccCCchhccCCChhhcccCCCCCCC
Q 004967 80 GGYLQYVVYIVTSLGFVRQSFDALVDGIEKSVLQAHENLRPGSIFVNKGELLDASISRSPSAYLNNPASERGKYKYNVDK 159 (721)
Q Consensus 80 ~g~~~~~l~~i~~~g~~~~y~~~lv~~iv~AI~~A~~~l~Pa~l~~g~g~~~~~~~NR~~~ay~~NP~~er~~y~g~vD~ 159 (721)
++|+++.+++++..||+++|+++|+++|++||++||++|+|++|.++++++.++++|||+.+|++|| ||++|++++||
T Consensus 103 ~g~~~~~l~~~~~~g~~~~y~~~lv~~iv~AI~~A~~~l~pa~l~~g~g~~~~~~~NRs~~ay~~NP--er~~~~g~vD~ 180 (646)
T 2zws_A 103 GGFSHYAMYNLSVLGFQEKTFNAIVDGIVRSIERAQARLQPGRLFYGSGELRNASRNRSLLSHLKNP--DIAGYEDGIDP 180 (646)
T ss_dssp CCCCSSHHHHGGGTBCCHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSSEEESCHHHHTTCS--CCTTCTTSCCC
T ss_pred cccccccccccccccccHHHHHHHHHHHHHHHHHHHhcCCcEEEEEEEEEeCcceecCChhhhhcCc--cccccCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999 89999999999
Q ss_pred eeEEEEEEeCCCCeEEEEEeeeccccccCCCCccccCCcHHHHHHHHHHHhhccCCCCCCcccccccCCCcccccccccc
Q 004967 160 EMTLLKFVDDQWGPVGSFNWFATHGTSMSRTNSLISGDNKGAAARFMEDWFEQSNAGHSSADELVSEGIPRRVSDIISDF 239 (721)
Q Consensus 160 ~l~vL~f~~~dG~~ia~L~~yA~HpTsl~~~N~lIS~D~~G~a~~~lE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (721)
+|++|+|++.||+++|+|+|||||||+|+++|++||+||+|+++++||+.+++
T Consensus 181 ~~~vL~f~~~dg~~ig~l~~fA~HpTsl~~~N~liS~D~~G~a~~~lE~~~~~--------------------------- 233 (646)
T 2zws_A 181 QMSVLSFVDANGELAGAISWFPVHSTSMTNANHLISPDNKGYASYHWEHDVSR--------------------------- 233 (646)
T ss_dssp EEEEEEEEETTCCEEEEEEECCCCBCSSCTTCCEEBCHHHHHHHHHHHHTTCC---------------------------
T ss_pred ceEEEEEEeCCCCEEEEEEEEccCceecCCCCCeecCccHHHHHHHHHHHhCC---------------------------
Confidence 99999999999999999999999999999999999999999999999997531
Q ss_pred ccchhHHHHHhhccCCCCCCchhhhhhhhhhhccccccccCCCeEEEEeccccCCCCCCCCCCccccCCCCCCCCCCcCC
Q 004967 240 RNNHHELLELAASFQSPPGKAATKILSVARRVRGILREAEKPGFVSAFCQSNCGDVSPNVLGAFCIDSGLPCDFNHSTCG 319 (721)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fVaaF~qg~~GDvSPn~~g~~c~d~g~~c~~~~s~c~ 319 (721)
.++||++|+|||+||||||+.
T Consensus 234 ----------------------------------------~~~fva~F~qg~~GDvsP~~~------------------- 254 (646)
T 2zws_A 234 ----------------------------------------KSGFVAAFAQTNAGNLSPNLN------------------- 254 (646)
T ss_dssp ----------------------------------------STTCEEEEECSSCTTEEECCC-------------------
T ss_pred ----------------------------------------CCCeEEEEeccCcccCCcccc-------------------
Confidence 257999999999999999975
Q ss_pred CCCcccccCCCCCCCchhhHHHHHHHHHHHHHHHHhhccccccccceeEEEEEeeceeeeecCCCCCCCccccccccccc
Q 004967 320 GKNEMCYGRGPGYPDEFESTRIIGERQFRKAVDLFNKASEKLEGKIDYRHSYLDFSQLEVTIPKQNGGSETVKTCPAAMG 399 (721)
Q Consensus 320 g~~~~~~~~GP~~~d~~e~~~~iG~~q~~~a~~l~~~~~~~l~g~v~~~~~~vd~~~~~v~~~~~~~~~~~~~tc~~a~G 399 (721)
+|+++||++ ++++++++||++|+++|++++++..++++|+|+++|++|||+++++.++.+ +++.++||++|||
T Consensus 255 ----~~~~~Gp~~-~~~e~~~~iG~~~~~~a~~~l~~~~~~l~g~v~~~~~~vdm~~~~v~~~~~--~g~~~~tc~~a~g 327 (646)
T 2zws_A 255 ----LKPGSGPFD-NEFDNTREIGLRQFAKAYEIAGQAQEEVLGELDSRFRFVDFTRLPIRPEFT--DGQPRQLCTAAIG 327 (646)
T ss_dssp ----CCTTCCTTS-CHHHHHHHHHHHHHHHHHHHHHHCCEEECSCEEEEEEEEECTTCEECGGGS--SSSCEECCCCCEE
T ss_pred ----ccccCCCCc-ccHHHHHHHHHHHHHHHHHHHhhccccccCCcceEEEEecCcceeeecccC--Ccccceechhhhc
Confidence 366889987 899999999999999999999887788999999999999999999987654 4478999999999
Q ss_pred hhhhhcc-CCCCCCccccCCCCCCChhHHHHhhhhcCC-ChhhhcccCCcceeecCCCCCCCCCCCCCceeeeEEEECCE
Q 004967 400 FAFAAGT-TDGPGAFDFTQGDDKGNPFWRLVRDLLKKP-DKEQINCQYPKPILLDTGEMKQPYDWAPSILPIQILQVGQL 477 (721)
Q Consensus 400 ~sfaagt-~dgpg~~~f~qg~~~~~p~w~~~~~~~~~p-~~~~~~cq~pKpill~~G~~~~p~~~~p~~v~iqilriG~l 477 (721)
++|+||+ +||||.|+|+|+ + ||+|+.+++++.+| ++|+++||+||||||++|+ +.||+|+|.+++||+||||+|
T Consensus 328 ~s~aag~~~dgpg~~~f~q~-~--~~~w~~~~~~l~~~~~~~~~~cq~~k~ill~~g~-~~p~~~~~~~v~vqilriGdl 403 (646)
T 2zws_A 328 TSLAAGSTEDGPGPLGLEEG-N--NPFLSALGGLLTGVPPQELVQCQAEKTILADTGN-KKPYPWTPTVLPIQMFRIGQL 403 (646)
T ss_dssp C---------------CCSS-C--CHHHHHTTCSCCCCCCHHHHHHTTTCCEEECCTT-CSSSCSSCSEEEEEEEEETTE
T ss_pred hhhhcCCcccCCCccccccc-c--chhhhhhhhhhccccchhHHhhccCcceecccCC-CCCcccccceEEEEEEEECCE
Confidence 9999999 999999999999 4 99999999999988 7999999999999999999 899999999999999999999
Q ss_pred EEEecCCchhhHHHHHHHHHHHHHHhhcCCCCCCceEEEEeccCCCccccCChhhhccCceeeeeeccCCCcHHHHHHHH
Q 004967 478 VILSVPGEFTTMAGRRLRDAVKTVVTTTGESNSNVHVVLAGLTNSYSQYVTTFEEYQVQRYEGASTLYGPHTLSAYIQEF 557 (721)
Q Consensus 478 ~iv~~PgE~tt~~G~rlr~~v~~~~~~~~~~~~~~~vvv~G~aN~y~~YitT~eeY~~q~YEg~sT~yGp~tl~ay~q~~ 557 (721)
+|+++|||+|+|+|+|||+++++.+.+. + ...|+|+||+|+|+|||||+|||+.|+|||+||+|||+|+++|+|++
T Consensus 404 ~iv~~PgE~tt~~G~rlr~~~~~~~~~~-~---~~~v~v~GyaN~y~gYi~T~EeY~~q~YEg~sT~~gp~tl~~~i~~~ 479 (646)
T 2zws_A 404 ELLGAPAEFTVMAGVRIRRAVQAASEAA-G---IRHVVFNGYANAYASYVTTREEYAAQEYEGGSTLYGPWTQAAYQQLF 479 (646)
T ss_dssp EEEECSSEECHHHHHHHHHHHHHHHGGG-T---CCEEEEECSBSSCCCEECCHHHHHHCCTTTTSCTTCTTHHHHHHHHH
T ss_pred EEEecCcHHHHHHHHHHHHHHHhhhccC-C---CceEEEEecCCCCCCccCCHHHHhcCCccceeeecCCChHHHHHHHH
Confidence 9999999999999999999999877553 3 37999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCCCCCCCccccccccccCCcccCCCCCCCCCcceeecCCCCCcccCCCeEEEEEEcccCCCCCCCCC
Q 004967 558 KKLASALLSGQPVELGPQPPDLLDKQISFLTPVVMDSTPIGVNFGDCKSDVPQNTTFRRGEMVTVSFWSACPRNDLMTEG 637 (721)
Q Consensus 558 ~~La~~l~~~~~~~~gp~p~~~~~~~~~~~~~v~~d~~~~g~~fGdv~~~~~~~~~y~~g~~v~~~F~~~~Prn~l~~~~ 637 (721)
.+|+++|.+|+++++||+|||++.++++|+++|++|.+|+|++||||++|| +++|++|++|+|+|++||||||||+++
T Consensus 480 ~~L~~~l~~~~~~~~g~~p~~~~~~~~~~~~~v~~d~~p~~~~fg~v~~~~--~~~y~~g~~v~~~f~~~~p~n~~~~~~ 557 (646)
T 2zws_A 480 VDMAVALRERLPVETSAIAPDLSCCQMNFQTGVVADDPYIGKSFGDVLQQP--RESYRIGDKVTVAFVTGHPKNDLRTEK 557 (646)
T ss_dssp HHHHHHHHHCCCCCCCCCCCCCGGGCCBCCCCCCCCCCCTTCCTTCEEECC--CSEEETTCEEEEEEECCCGGGCCCTTS
T ss_pred HHHHHHHhcCCCCCCCCCCccccccccccCCCCccCCCCCCCCCCcEeecC--cccccCCCEEEEEEEccCCCcccccCC
Confidence 999999999999999999999999999999999999999999999999999 679999999999999999999999999
Q ss_pred CeEEEEEEeCCCceE--EeecCCCcceEEEEecCCCCCceeEEEEEEEcCCCCCCcceEEEEeccccc-cCCCceeeEEe
Q 004967 638 TFALVEILHGKDIWA--PAYDDDDFCLRFKWSRPSKLSARSMATIEWRIPDTAPLGVYRIRHFGAAKS-LLGSTRHFTGS 714 (721)
Q Consensus 638 tf~~Ver~~~~~~W~--~v~~D~dw~t~~~W~r~~~~~~~s~~ti~W~ip~~~~~G~YRi~~~G~~k~-~~g~~~~~~g~ 714 (721)
||++|||+.++++|+ +|+||+||+|+|+|+|++. ++|++||+|+||++++||+|||+|||+||+ +.|+|+||+|+
T Consensus 558 t~~~ve~~~~~~~w~~~~v~~D~d~~t~~~w~r~~~--~~s~~~~~W~i~~~~~~g~yRi~~~g~~k~~~~g~~~~~~g~ 635 (646)
T 2zws_A 558 TFLEVVNIGKDGKQTPVTVATDNDWDTQYRWERVGI--SASKATISWSIPPGTEPGHYYIRHYGNAKNFWTQKISEIGGS 635 (646)
T ss_dssp CSEEEEEEESSSCCCCEEEEETTSTTEEEEEEEETT--TEEEEEEEEECCTTCCSEEEEEEEEEEEECTTTCCEEEEEEE
T ss_pred ceEEEEEecCCCceEEEEEecCCCccEEEEEEeCCC--CceEEEEEEECCCCCCCcceEEEEEcccccccCCCceeeEEe
Confidence 999999977789999 9999999999999999984 899999999999999999999999999999 99999999999
Q ss_pred ccceEEC
Q 004967 715 SSAFVVA 721 (721)
Q Consensus 715 s~~F~v~ 721 (721)
|++|+|.
T Consensus 636 s~~f~v~ 642 (646)
T 2zws_A 636 TRSFEVL 642 (646)
T ss_dssp CCCEEEE
T ss_pred cccEEEe
Confidence 9999984
No 2
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=94.89 E-value=0.15 Score=44.57 Aligned_cols=88 Identities=14% Similarity=0.177 Sum_probs=55.1
Q ss_pred CCcccCCCeEEEEEEcccCCCCCCCCCCeEEEEEEeCCCceEEeecCCCcceEEEEecCCCCCceeEEEEEEEcCCCCCC
Q 004967 611 NTTFRRGEMVTVSFWSACPRNDLMTEGTFALVEILHGKDIWAPAYDDDDFCLRFKWSRPSKLSARSMATIEWRIPDTAPL 690 (721)
Q Consensus 611 ~~~y~~g~~v~~~F~~~~Prn~l~~~~tf~~Ver~~~~~~W~~v~~D~dw~t~~~W~r~~~~~~~s~~ti~W~ip~~~~~ 690 (721)
++.|+|||||.+.++.-++... ......+.|+-.+. +-....+|..... ....+..+|.+|.+.+.
T Consensus 10 r~iYrPGetV~~~~~~~~~~~~-p~~~~~~~v~l~dp-----------~g~~v~~~~~~~~--~~G~~~~~f~Lp~~~~~ 75 (102)
T 2p9r_A 10 KSIYKPGQTVKFRVVSMDENFH-PLNELIPLVYIQDP-----------KGNRIAQWQSFQL--EGGLKQFSFPLSSEPFQ 75 (102)
T ss_dssp CSEECTTCEEEEEEEEECGGGC-BCCCEEEEEEEECT-----------TSCEEEEEEEEEC--BTTEEEEEEECCSSCCC
T ss_pred CcccCCCCEEEEEEEEECCCCc-CCCCCceEEEEECC-----------CCCEEEEEEeecC--CCCEEEEEEECCCCCCC
Confidence 5689999999988876554322 22344556654332 2334455544321 23356789999999999
Q ss_pred cceEEEEeccccccCCCceeeEEeccceEEC
Q 004967 691 GVYRIRHFGAAKSLLGSTRHFTGSSSAFVVA 721 (721)
Q Consensus 691 G~YRi~~~G~~k~~~g~~~~~~g~s~~F~v~ 721 (721)
|.|+|+-.-.. |. -.+.+|+|+
T Consensus 76 G~y~i~~~~~~----~~-----~~~~~F~Ve 97 (102)
T 2p9r_A 76 GSYKVVVQKKS----GG-----RTEHPFTVE 97 (102)
T ss_dssp EEEEEEEECTT----SC-----EEEEEEEEC
T ss_pred eeEEEEEEECC----CC-----eEEEEEEEE
Confidence 99999987432 21 145678874
No 3
>4fxk_A Complement C4 beta chain; immune system, proteolytic cascade; HET: NAG BMA; 3.60A {Homo sapiens} PDB: 4fxg_A*
Probab=82.56 E-value=4.9 Score=45.83 Aligned_cols=81 Identities=14% Similarity=0.105 Sum_probs=50.6
Q ss_pred cceeecCCCCCcccCCCeEEEEEEcccCCCCCCCCCCeEEEEEEeCCCceEEeecCCCcceEEEEecCCCCCceeEEEEE
Q 004967 602 GDCKSDVPQNTTFRRGEMVTVSFWSACPRNDLMTEGTFALVEILHGKDIWAPAYDDDDFCLRFKWSRPSKLSARSMATIE 681 (721)
Q Consensus 602 Gdv~~~~~~~~~y~~g~~v~~~F~~~~Prn~l~~~~tf~~Ver~~~~~~W~~v~~D~dw~t~~~W~r~~~~~~~s~~ti~ 681 (721)
|-|..|-+ ++-|+|||||.+..+.=+++ ++....-+.|+-...+| .....|.-... ...+..+
T Consensus 120 ~~vFIqTD-r~iYrPGqtV~~r~i~~d~~--~~p~~~~~~v~i~dp~g-----------~~v~~~~~~~~---~G~~~~~ 182 (656)
T 4fxk_A 120 GHLFLQTD-QPIYNPGQRVRYRVFALDQK--MRPSTDTITVMVENSHG-----------LRVRKKEVYMP---SSIFQDD 182 (656)
T ss_dssp SEEEEEES-CSEECTTCEEEEEEEEECSS--SSBCCCCEEEEEECTTC-----------CEEEEEEECCT---TSEEEEE
T ss_pred ccEEEECC-CCCcCCCCEEEEEEEEECCc--cCcCcccceEEEECCCC-----------cEEeeeEEecC---CceEEEE
Confidence 44554543 67999999999887776553 33222223555433222 22334543322 3467889
Q ss_pred EEcCCCCCCcceEEEEec
Q 004967 682 WRIPDTAPLGVYRIRHFG 699 (721)
Q Consensus 682 W~ip~~~~~G~YRi~~~G 699 (721)
|.+|.+.+.|+|+|+..-
T Consensus 183 f~Lp~~~~~G~w~i~v~~ 200 (656)
T 4fxk_A 183 FVIPDISEPGTWKISARF 200 (656)
T ss_dssp EECCTTCCSEEEEEEEEE
T ss_pred ecCCCCCCCcCEEEEEEE
Confidence 999999999999999864
No 4
>2pn5_A TEP1R, thioester-containing protein I; FULL-length mature peptide, immune system; HET: NAG; 2.70A {Anopheles gambiae}
Probab=76.07 E-value=9.4 Score=47.72 Aligned_cols=85 Identities=18% Similarity=0.108 Sum_probs=53.1
Q ss_pred cceeecCCCCCcccCCCeEEEEEEcccCCCCCCCCCCeEEEEEEeCCCceEEeecCCCcceEEEEecCCCCCceeEEEEE
Q 004967 602 GDCKSDVPQNTTFRRGEMVTVSFWSACPRNDLMTEGTFALVEILHGKDIWAPAYDDDDFCLRFKWSRPSKLSARSMATIE 681 (721)
Q Consensus 602 Gdv~~~~~~~~~y~~g~~v~~~F~~~~Prn~l~~~~tf~~Ver~~~~~~W~~v~~D~dw~t~~~W~r~~~~~~~s~~ti~ 681 (721)
+.+..|-+ ++.|+|||||.+.-+.=++....-.....+.|+-.+.+ -....+|..... ....+..+
T Consensus 100 ~~~fi~TD-r~iYrPGqtV~~r~~~~~~~~~p~~~~~~v~v~l~dp~-----------g~~i~~~~~~~~--~~G~~~~~ 165 (1325)
T 2pn5_A 100 ISGLIQVD-KPVFKPGDTVNFRVIVLDTELKPPARVKSVYVTIRDPQ-----------RNVIRKWSTAKL--YAGVFESD 165 (1325)
T ss_dssp EEEEEEES-CSEECTTCEEEEEEEEEETTSSCCSSCCEEEEEEECTT-----------CCEEEEEEEEEC--BTTEEEEE
T ss_pred ccEEEecC-CCccCCCCEEEEEEEEecCCccccccCccEEEEEECCC-----------CCEEEEEecccC--CCCeEecc
Confidence 44555544 67899999999776665554222122224566543322 233455654221 23357789
Q ss_pred EEcCCCCCCcceEEEEecc
Q 004967 682 WRIPDTAPLGVYRIRHFGA 700 (721)
Q Consensus 682 W~ip~~~~~G~YRi~~~G~ 700 (721)
|.+|.+...|.|+|+-+..
T Consensus 166 f~Lp~~~~~G~y~I~~~~~ 184 (1325)
T 2pn5_A 166 LQIAPTPMLGVWNISVEVE 184 (1325)
T ss_dssp EECCSSCCCEEEEEEEEET
T ss_pred eECCCCccccceEEEEEeC
Confidence 9999999999999998754
No 5
>4acq_A Alpha-2-macroglobulin; hydrolase inhibitor, proteinase inhibitor, irreversible PROT inhibitor, conformational change, blood plasma inhibitor; HET: MEQ NAG MAN; 4.30A {Homo sapiens}
Probab=69.88 E-value=17 Score=46.08 Aligned_cols=86 Identities=12% Similarity=0.083 Sum_probs=56.6
Q ss_pred CCcceeecCCCCCcccCCCeEEEEEEcccCCCCCCCCCCeEEEEEEeCCCceEEeecCCCcceEEEEecCCCCCceeEEE
Q 004967 600 NFGDCKSDVPQNTTFRRGEMVTVSFWSACPRNDLMTEGTFALVEILHGKDIWAPAYDDDDFCLRFKWSRPSKLSARSMAT 679 (721)
Q Consensus 600 ~fGdv~~~~~~~~~y~~g~~v~~~F~~~~Prn~l~~~~tf~~Ver~~~~~~W~~v~~D~dw~t~~~W~r~~~~~~~s~~t 679 (721)
+-|-+..|-+ ++.|+|||+|...-+.=++.... ...++..|+-+ |.+.....+|..... ....+.
T Consensus 102 ~~~~~fiqTD-K~iY~Pgq~V~~rv~~~~~~~~p-~~~~~~~v~i~-----------dp~g~~i~~~~~~~~--~~G~~~ 166 (1451)
T 4acq_A 102 EDSLVFVQTD-KSIYKPGQTVKFRVVSMDENFHP-LNELIPLVYIQ-----------DPKGNRIAQWQSFQL--EGGLKQ 166 (1451)
T ss_dssp CCCEEEEEES-CSEECTTCEEEEEEEEECTTCCB-CCCEEEEEEEE-----------CTTSCEEEEEEEEEC--BTTEEE
T ss_pred cCccEEEECC-CCcCCCCCEEEEEEEEECCCCcC-ccCceeEEEEE-----------CCCCCEEEEeeeccC--CCCeEE
Confidence 3455666654 68999999999776666653222 23455455543 333445567765322 234677
Q ss_pred EEEEcCCCCCCcceEEEEecc
Q 004967 680 IEWRIPDTAPLGVYRIRHFGA 700 (721)
Q Consensus 680 i~W~ip~~~~~G~YRi~~~G~ 700 (721)
.+|.+|.....|+|+|+-...
T Consensus 167 ~~f~L~~~~~~G~w~I~~~~~ 187 (1451)
T 4acq_A 167 FSFPLSSEPFQGSYKVVVQKK 187 (1451)
T ss_dssp EEEECCSSCCCEEEEEEEECT
T ss_pred EEeECCCCCCceeEEEEEEec
Confidence 899999999999999998643
No 6
>3hrz_A Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_A* 3hs0_A*
Probab=68.15 E-value=6.1 Score=45.56 Aligned_cols=78 Identities=15% Similarity=0.105 Sum_probs=46.6
Q ss_pred cceeecCCCCCcccCCCeEEEEEEcccCCCCCCCCCCeEEEEEEeCCCceEEeecCCCcceEEEEecCCCCCceeEEEEE
Q 004967 602 GDCKSDVPQNTTFRRGEMVTVSFWSACPRNDLMTEGTFALVEILHGKDIWAPAYDDDDFCLRFKWSRPSKLSARSMATIE 681 (721)
Q Consensus 602 Gdv~~~~~~~~~y~~g~~v~~~F~~~~Prn~l~~~~tf~~Ver~~~~~~W~~v~~D~dw~t~~~W~r~~~~~~~s~~ti~ 681 (721)
|-+..|-+ ++-|+|||+|.+.++.-++.... .+.+ +.|+-++.+| . ++.|..... . +..+
T Consensus 104 ~~~fi~TD-r~iYrPGqtV~~r~i~~d~~~~p-~~~~-~~v~i~dP~g-----------~-~i~~~~~~~--~---~~~~ 163 (627)
T 3hrz_A 104 SFLFIQTD-KGIYTPGSPVLYRVFSMDHNTSK-MNKT-VIVEFQTPEG-----------I-LVSSNSVDL--N---FFWP 163 (627)
T ss_dssp SCEEEEES-CSEECTTCEECEEEEESCC--------C-EEEEEECTTC-----------C-EEEEEEEBT--T---BCCC
T ss_pred CcEEEECC-CCccCCCCEEEEEEEEECCCCcc-cCcc-EEEEEECCCC-----------C-EEEEEEecc--c---eEEE
Confidence 44555543 67999999999999887754322 1222 3444332222 1 233433211 1 6678
Q ss_pred EEcCCCCCCcceEEEEec
Q 004967 682 WRIPDTAPLGVYRIRHFG 699 (721)
Q Consensus 682 W~ip~~~~~G~YRi~~~G 699 (721)
|.+|.+.+.|+|+|+-.-
T Consensus 164 f~Lp~~~~~G~w~i~v~~ 181 (627)
T 3hrz_A 164 YNLPDLVSLGTWRIVAKY 181 (627)
T ss_dssp EECCSSCCCEEEEEEEEE
T ss_pred EECCCCCCCeeEEEEEEE
Confidence 999999999999999864
No 7
>2hr0_A Complement C3 beta chain; complement component C3B, immune system; HET: THC; 2.26A {Homo sapiens} PDB: 2i07_A* 2wii_A* 2win_A* 2xwj_A* 3l3o_A* 3l5n_A* 3nms_A* 3nsa_A* 3ohx_A* 3t4a_A 2a74_A* 2a73_A* 2qki_A* 3g6j_A 2ice_A* 2icf_A* 2xwb_A*
Probab=60.98 E-value=34 Score=39.05 Aligned_cols=83 Identities=19% Similarity=0.373 Sum_probs=50.5
Q ss_pred cceeecCCCCCcccCCCeEEEEEEcccCCCCCCCCCCeEEEEEEeCCCceEEeecCCCcceEEEEecCCCCCceeEEEEE
Q 004967 602 GDCKSDVPQNTTFRRGEMVTVSFWSACPRNDLMTEGTFALVEILHGKDIWAPAYDDDDFCLRFKWSRPSKLSARSMATIE 681 (721)
Q Consensus 602 Gdv~~~~~~~~~y~~g~~v~~~F~~~~Prn~l~~~~tf~~Ver~~~~~~W~~v~~D~dw~t~~~W~r~~~~~~~s~~ti~ 681 (721)
|-+..|-+ ++-|+|||||.+.++.=+++ ++.....++|+-.+.+| ..| -+..|...+. ...+..+
T Consensus 106 ~~~fi~TD-R~iYrPGqtV~~r~i~~d~~--~~p~~~~v~v~l~dP~g--~~i-------~~~~~~~~~~---~G~~~~~ 170 (645)
T 2hr0_A 106 GYLFIQTD-KTIYTPGSTVLYRIFTVNHK--LLPVGRTVMVNIENPEG--IPV-------KQDSLSSQNQ---LGVLPLS 170 (645)
T ss_dssp CEEEEEES-CSBCCTTSEEEEEEEEECTT--SCBCCCEEEEEEECTTS--CEE-------EEEEEECTTT---TTEEEEE
T ss_pred ccEEEEcC-CccCCCCCEEEEEEEEECCC--CcccCceEEEEEECCCC--CEE-------EEEEeecccc---CCeEEEE
Confidence 33444433 67899999999888876643 33222345666543322 111 1223333101 2356789
Q ss_pred EEcCCCCCCcceEEEEec
Q 004967 682 WRIPDTAPLGVYRIRHFG 699 (721)
Q Consensus 682 W~ip~~~~~G~YRi~~~G 699 (721)
|.+|.+.+.|+|+|+-.-
T Consensus 171 f~Lp~~~~~G~w~I~v~~ 188 (645)
T 2hr0_A 171 WDIPELVNMGQWKIRAYY 188 (645)
T ss_dssp EECCSSCCCSEEEEEEEE
T ss_pred EECCCccccccEEEEEEE
Confidence 999999999999999864
No 8
>3prx_B Cobra venom factor; immune system, complement, immune SYS complex; HET: NAG; 4.30A {Naja kaouthia} PDB: 3pvm_B*
Probab=59.61 E-value=28 Score=44.70 Aligned_cols=80 Identities=19% Similarity=0.115 Sum_probs=50.5
Q ss_pred CcceeecCCCCCcccCCCeEEEEEEcccCCCCCCCCCCeEEEEEEeCCCceEEeecCCCcceEEEEecCCCCCceeEEEE
Q 004967 601 FGDCKSDVPQNTTFRRGEMVTVSFWSACPRNDLMTEGTFALVEILHGKDIWAPAYDDDDFCLRFKWSRPSKLSARSMATI 680 (721)
Q Consensus 601 fGdv~~~~~~~~~y~~g~~v~~~F~~~~Prn~l~~~~tf~~Ver~~~~~~W~~v~~D~dw~t~~~W~r~~~~~~~s~~ti 680 (721)
-|-+..|-+ ++.|+|||+|.+.-..-++.-..- +.+ ++|+- .|.+-....+|.-.. . +..
T Consensus 125 ~~~~FiqTD-k~iYrPGqtV~~rvi~~~~~~~p~-~~~-~~v~i-----------~dP~g~~i~~~~~~~---~---~~~ 184 (1642)
T 3prx_B 125 SSFLFIQTD-KGIYTPGSPVLYRVFSMDHNTSKM-NKT-VIVEF-----------QTPEGILVSSNSVDL---N---FFW 184 (1642)
T ss_dssp CCCEEEEES-CSEECTTCEEEEEEEECCC------CCC-EEEEE-----------ECSSCCEEEEEEECT---T---CCC
T ss_pred CCeEEEEcC-CCcCCCCCEEEEEEEEEcCCCccc-Cce-EEEEE-----------ECCCCCEEEEEEecc---c---ceE
Confidence 466666654 689999999998777755432211 222 24432 244444555665432 1 667
Q ss_pred EEEcCCCCCCcceEEEEecc
Q 004967 681 EWRIPDTAPLGVYRIRHFGA 700 (721)
Q Consensus 681 ~W~ip~~~~~G~YRi~~~G~ 700 (721)
+|.+|...+.|+|+|+-..+
T Consensus 185 ~f~L~~~~~~G~w~I~v~~~ 204 (1642)
T 3prx_B 185 PYNLPDLVSLGTWRIVAKYE 204 (1642)
T ss_dssp EEECCSSCCCEEEEEEEEET
T ss_pred EEEcCCCCCceeEEEEEEeC
Confidence 99999999999999998654
No 9
>2c9r_A COPC, copper resistance protein C; copper transport, copper proteins, copper dissociation const metal-binding, electron transport; 2.0A {Pseudomonas syringae PV} PDB: 1m42_A 1nm4_A 1ot4_A 2c9p_A 2c9q_A
Probab=48.16 E-value=1.1e+02 Score=26.68 Aligned_cols=59 Identities=12% Similarity=0.084 Sum_probs=26.7
Q ss_pred CeEEEEEEcccCCCCCCCCCCeEEEEEEeCCCceEE--------eecCCCcceEEEEecCCCCCceeEEEEEEEc
Q 004967 618 EMVTVSFWSACPRNDLMTEGTFALVEILHGKDIWAP--------AYDDDDFCLRFKWSRPSKLSARSMATIEWRI 684 (721)
Q Consensus 618 ~~v~~~F~~~~Prn~l~~~~tf~~Ver~~~~~~W~~--------v~~D~dw~t~~~W~r~~~~~~~s~~ti~W~i 684 (721)
+.|+.+| .-.+....+-+.|-.. ++..|.. ...|.+..+.+...-. . +....++|.|++
T Consensus 19 ~~v~L~F-----se~v~~~~s~v~v~~~-~g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~-~-L~~G~YtV~Wrv 85 (102)
T 2c9r_A 19 AKIELHF-----SENLVTQFSGAKLVMT-AMPGMEHSPMAVKAAVSGGGDPKTMVITPAS-P-LTAGTYKVDWRA 85 (102)
T ss_dssp SCEEEEE-----SSCCCGGGCEEEEEEE-ECC-----CEEECEEEEECSSTTEEEEEESS-C-CCSEEEEEEEEE
T ss_pred CEEEEEe-----CCCCccCccEEEEECC-CCCeeeeccccccccceecCCCCcEEEEECC-C-CCCceEEEEEEE
Confidence 6788899 2233333344566543 2345654 2334444455544432 1 334455555554
No 10
>3cu7_A Complement C5; Mg domain, inflammation, anaphylatoxin, cleavage of basic residues, complement alternate pathway, glycoprotein, immune response; HET: NAG; 3.10A {Homo sapiens} PDB: 3kls_A* 3km9_A* 4e0s_A* 3prx_A* 3pvm_A* 4a5w_A* 1xwe_A
Probab=44.54 E-value=36 Score=43.72 Aligned_cols=81 Identities=11% Similarity=0.136 Sum_probs=50.1
Q ss_pred CcceeecCCCCCcccCCCeEEEEEEcccCCCCCC-CCCCeEEEEEEeCCCceEEeecCCCcceEEEEecCCCCCceeEEE
Q 004967 601 FGDCKSDVPQNTTFRRGEMVTVSFWSACPRNDLM-TEGTFALVEILHGKDIWAPAYDDDDFCLRFKWSRPSKLSARSMAT 679 (721)
Q Consensus 601 fGdv~~~~~~~~~y~~g~~v~~~F~~~~Prn~l~-~~~tf~~Ver~~~~~~W~~v~~D~dw~t~~~W~r~~~~~~~s~~t 679 (721)
-+.+..|-+ ++-|+|||||.+.+..-+.. ++ ...+ ++|+-.+.+| ....+|.... ....+.
T Consensus 123 ~~~~fiqTD-R~iYrPGqtV~~r~i~~d~~--~~p~~~~-v~v~l~dP~G-----------~~i~~~~~~~---~~G~~~ 184 (1676)
T 3cu7_A 123 NGFLFIHTD-KPVYTPDQSVKVRVYSLNDD--LKPAKRE-TVLTFIDPEG-----------SEVDMVEEID---HIGIIS 184 (1676)
T ss_dssp CSEEEEEES-CSEECTTCEECEEEEEECTT--CSCCCCC-EEEEEEETTT-----------EECCCEEECC---SSSEEE
T ss_pred CCcEEEECC-CCccCCCCEEEEEEEEECCC--Ccccccc-eEEEEECCCC-----------CEEEEEeeec---CCCcee
Confidence 455555544 67899999999887765542 22 2222 4455433322 2233343222 233567
Q ss_pred -EEEEcCCCCCCcceEEEEec
Q 004967 680 -IEWRIPDTAPLGVYRIRHFG 699 (721)
Q Consensus 680 -i~W~ip~~~~~G~YRi~~~G 699 (721)
.++.+|.+.+.|+|+|+-.-
T Consensus 185 ~~~f~Lp~~~~~G~w~I~v~~ 205 (1676)
T 3cu7_A 185 FPDFKIPSNPRYGMWTIKAKY 205 (1676)
T ss_dssp CCCEECCSSCCCEEEEEEEEB
T ss_pred cceeeCCCCccccceEEEEEe
Confidence 79999999999999999864
No 11
>1lyq_A PCOC copper resistance protein; beta barrel, IG domain, metal binding protein; 1.50A {Escherichia coli} SCOP: b.1.18.17 PDB: 1ix2_A
Probab=42.07 E-value=1.1e+02 Score=26.78 Aligned_cols=29 Identities=14% Similarity=0.118 Sum_probs=13.9
Q ss_pred CeEEEEEEcccCCCCCCCCCCeEEEEEEeCCCceE
Q 004967 618 EMVTVSFWSACPRNDLMTEGTFALVEILHGKDIWA 652 (721)
Q Consensus 618 ~~v~~~F~~~~Prn~l~~~~tf~~Ver~~~~~~W~ 652 (721)
+.|+.+| .-.+....+-+.|-... +..|.
T Consensus 20 ~~V~L~F-----se~v~~~~s~v~v~~~~-g~~v~ 48 (104)
T 1lyq_A 20 EKIQLNF-----SENLTVKFSGAKLTMTG-MKGMS 48 (104)
T ss_dssp CCEEEEE-----SSCCCGGGCEEEEEEEE-EC---
T ss_pred CEEEEEe-----CCCCcccccEEEEECCC-CCeee
Confidence 6788899 22344333455665432 33454
No 12
>3zxn_A RSBS, anti-sigma-factor antagonist (STAS) domain protei; transcription, gene regulation; 1.90A {Moorella thermoacetica} PDB: 2vy9_A 3ztb_A*
Probab=35.64 E-value=64 Score=28.71 Aligned_cols=48 Identities=8% Similarity=0.200 Sum_probs=35.8
Q ss_pred eeeEEEECCEEEEecCCchhhHHHHHHHHHHHHHHhhcCCCCCCceEEEEecc
Q 004967 468 PIQILQVGQLVILSVPGEFTTMAGRRLRDAVKTVVTTTGESNSNVHVVLAGLT 520 (721)
Q Consensus 468 ~iqilriG~l~iv~~PgE~tt~~G~rlr~~v~~~~~~~~~~~~~~~vvv~G~a 520 (721)
.+.++++++..++.+.||+.......|++.+.+.+... ....+|.=++
T Consensus 4 s~pii~~~~vlvv~l~G~lD~~~a~~l~~~ll~~i~~~-----~~~~vIlDls 51 (123)
T 3zxn_A 4 RVPILKVDDYWVVAIEETLHDQSVIQFKEELLHNITGV-----AGKGLVIDIS 51 (123)
T ss_dssp CSCEEEETTEEEEECCCCC-CHHHHHHHHHHHHHHTSS-----CCSEEEEECT
T ss_pred cccEEEECCEEEEEEeEeeCHHHHHHHHHHHHHHHHhc-----CCCEEEEEcC
Confidence 34568999999999999999999999999988766432 2455565553
No 13
>2b39_A C3; thioester, immune defense, immune system; HET: NAG BMA; 3.00A {Bos taurus}
Probab=34.87 E-value=60 Score=41.62 Aligned_cols=83 Identities=20% Similarity=0.372 Sum_probs=49.9
Q ss_pred cceeecCCCCCcccCCCeEEEEEEcccCCCCCCCCCCeEEEEEEeCCCceEEeecCCCcceEEEEecCCCCCceeEEEEE
Q 004967 602 GDCKSDVPQNTTFRRGEMVTVSFWSACPRNDLMTEGTFALVEILHGKDIWAPAYDDDDFCLRFKWSRPSKLSARSMATIE 681 (721)
Q Consensus 602 Gdv~~~~~~~~~y~~g~~v~~~F~~~~Prn~l~~~~tf~~Ver~~~~~~W~~v~~D~dw~t~~~W~r~~~~~~~s~~ti~ 681 (721)
|.+..|-+ ++-|+|||||.+.++.-+.+ ++....-++|+-.+.+| ..|. +..|..++. ...+..+
T Consensus 127 ~~~fiqTD-R~iYrPGqtV~~r~i~~d~~--~~p~~~~v~v~l~dP~g--~~i~-------~~~~~~t~~---~G~~~~~ 191 (1661)
T 2b39_A 127 GYLFIQTD-KTIYTPGSTVLYRVFTVDHK--LLPVGQTVFITIETPDG--IPVK-------RDSKSSQNQ---FGILTLS 191 (1661)
T ss_dssp CEEEEEES-CSEECTTSEEEEEEEEECTT--SCCCCCCEEEEEEETTE--EEEE-------EEEECTTTT---TSCCEEE
T ss_pred CcEEEecC-CCccCCCCEEEEEEEEECCC--CcccCceEEEEEECCCC--CEEe-------eeeeccccc---CCeEeee
Confidence 34444443 67899999999888876643 33222334666543322 2221 223332111 2245679
Q ss_pred EEcCCCCCCcceEEEEec
Q 004967 682 WRIPDTAPLGVYRIRHFG 699 (721)
Q Consensus 682 W~ip~~~~~G~YRi~~~G 699 (721)
|.+|.+.+.|+|+|+-.-
T Consensus 192 f~Lp~~~~~G~w~I~v~~ 209 (1661)
T 2b39_A 192 WNIPELVNMGVWKIKAYY 209 (1661)
T ss_dssp EECCSSCCCEEEEEEEEE
T ss_pred eeCCCCccccceEEEEEe
Confidence 999999999999999863
No 14
>4eyb_A Beta-lactamase NDM-1; metallo beta lactamase, antibiotic, hydrolase-antibiotic COM; HET: 0WO; 1.16A {Klebsiella pneumoniae} PDB: 4ey2_A* 4eyf_A* 4exy_A 4exs_B 4eyl_A* 3spu_A 3q6x_A* 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A
Probab=34.60 E-value=61 Score=32.47 Aligned_cols=49 Identities=18% Similarity=0.312 Sum_probs=33.0
Q ss_pred EEEEEEEeCCCCEEEEEEeccCcccHHHHHHHHHHHHHHhCCCCCCCcEEEEeeccCC
Q 004967 20 ARTFIVAEPQGNRVVFVNLDACMASQIVKIKVIERLKARYGDLYTEKNVAISGIHTHA 77 (721)
Q Consensus 20 ARAlvl~d~~~~rvv~Vs~Dl~~i~~~v~~~Vr~~L~~~~G~~i~~~nVlIsATHTHS 77 (721)
+.++++.+ ++.+ |.+|..+ .....+++.+.|++..+ .+...|+ .||.|.
T Consensus 75 ~N~ylv~~--~~~~--ilIDtg~-~~~~~~~l~~~i~~~~~--~~I~~Ii--~TH~H~ 123 (270)
T 4eyb_A 75 SNGLIVRD--GGRV--LVVDTAW-TDDQTAQILNWIKQEIN--LPVALAV--VTHAHQ 123 (270)
T ss_dssp EEEEEEEE--TTEE--EEESCCS-SHHHHHHHHHHHHHHTC--CCEEEEE--ECSSSH
T ss_pred eEEEEEEE--CCEE--EEEeCCC-CHHHHHHHHHHHHHhcC--CceEEEE--eCCCCh
Confidence 56778876 3443 4468764 55667788888888777 6665555 578875
No 15
>1vra_A Arginine biosynthesis bifunctional protein ARGJ; 10175521, S genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.00A {Bacillus halodurans}
Probab=32.88 E-value=63 Score=32.14 Aligned_cols=46 Identities=15% Similarity=0.174 Sum_probs=36.3
Q ss_pred EEEEEEEEeCCCCEEEEEEeccCcccH--HHHHHHHHHHHHHhCCCCCCCcEEEEeec
Q 004967 19 RARTFIVAEPQGNRVVFVNLDACMASQ--IVKIKVIERLKARYGDLYTEKNVAISGIH 74 (721)
Q Consensus 19 ~ARAlvl~d~~~~rvv~Vs~Dl~~i~~--~v~~~Vr~~L~~~~G~~i~~~nVlIsATH 74 (721)
.+||+|+.++ ..-.+-..+ .-..++.+.+++.+| +++++|++++|=
T Consensus 89 ~~rAvvvNSG--------nANA~TG~~G~~da~~~a~~~A~~lg--i~~~~VlvaSTG 136 (208)
T 1vra_A 89 KLQAMIVNSG--------IANACTGKRGLDDAYTMRAVGAETFH--IPEHYVAVTSTG 136 (208)
T ss_dssp EEEEEEEEEE--------ECCCSCHHHHHHHHHHHHHHHHHHHT--SCGGGEEEEEEE
T ss_pred ceEEEEEccC--------CccccccHHHHHHHHHHHHHHHHHhC--CChhHEEEeCCc
Confidence 5799999885 455566544 445588899999999 999999999983
No 16
>3eja_A Protein GH61E; beta sandwich, fibronectin type III fold, metal site, magnes unknown function; HET: NAG; 1.90A {Thielavia terrestris} PDB: 3eii_A*
Probab=31.18 E-value=91 Score=30.94 Aligned_cols=24 Identities=21% Similarity=0.230 Sum_probs=18.8
Q ss_pred EEEEEcCCCCCCcceEEEEecccc
Q 004967 679 TIEWRIPDTAPLGVYRIRHFGAAK 702 (721)
Q Consensus 679 ti~W~ip~~~~~G~YRi~~~G~~k 702 (721)
+.+.+||.+.++|.|-|||.=-+-
T Consensus 118 ~~~~~iP~~l~~G~YllR~E~ial 141 (208)
T 3eja_A 118 SFAVPIPPCIKSGYYLLRAEQIGL 141 (208)
T ss_dssp EEEEECCSSBCSEEEEEEEEEEEC
T ss_pred ceEEeccCCCCCcceEEEeeeeee
Confidence 346679999999999999865443
No 17
>2vtc_A CEL61B, cellulase; hydrolase, glycoside; HET: NAG; 1.6A {Hypocrea jecorina}
Probab=31.09 E-value=5.6 Score=40.75 Aligned_cols=23 Identities=30% Similarity=0.325 Sum_probs=18.8
Q ss_pred EEEEEcCCCCCCcceEEEEeccc
Q 004967 679 TIEWRIPDTAPLGVYRIRHFGAA 701 (721)
Q Consensus 679 ti~W~ip~~~~~G~YRi~~~G~~ 701 (721)
+.+.+||.+.++|.|-|||.=-+
T Consensus 160 ~~~~tIP~~l~~G~YLlR~E~iA 182 (249)
T 2vtc_A 160 KWTVKIPSSLRPGNYVFRHELLA 182 (249)
T ss_dssp EEEEECCTTBCSEEEEEEEEEEE
T ss_pred eeEEEcCCCCCCcceEEEEEeee
Confidence 45778999999999999986543
No 18
>2dle_A Receptor-type tyrosine-protein phosphatase ETA; protein-tyrosine phosphatase ETA, R-PTP-ETA, HPTP ETA, protein-tyrosine phosphatase receptor type J; NMR {Homo sapiens}
Probab=30.13 E-value=34 Score=29.53 Aligned_cols=25 Identities=24% Similarity=0.518 Sum_probs=18.0
Q ss_pred eEEEEEEEcCCCCCC--cceEEEEecc
Q 004967 676 SMATIEWRIPDTAPL--GVYRIRHFGA 700 (721)
Q Consensus 676 s~~ti~W~ip~~~~~--G~YRi~~~G~ 700 (721)
+.++|.|..|.+... -.|||+|++.
T Consensus 22 ~Sv~LsW~~p~~~~~~i~~Y~v~~~~~ 48 (104)
T 2dle_A 22 TSLTLIWKVSDNESSSNYTYKIHVAGE 48 (104)
T ss_dssp SCEEEEEEESCSTTCCSCEEEEEEECS
T ss_pred CEEEEEEcCCCCCCCceEEEEEEEECC
Confidence 459999998764322 2599999875
No 19
>4hl2_A Beta-lactamase NDM-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ZZ7; 1.05A {Klebsiella pneumoniae} PDB: 4hl1_A* 4h0d_A* 4gyu_A* 4gyq_A 3q6x_A* 3spu_A 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A
Probab=30.02 E-value=1.1e+02 Score=29.67 Aligned_cols=51 Identities=18% Similarity=0.307 Sum_probs=32.0
Q ss_pred eEEEEEEEEeCCCCEEEEEEeccCcccHHHHHHHHHHHHHHhCCCCCCCcEEEEeeccCC
Q 004967 18 LRARTFIVAEPQGNRVVFVNLDACMASQIVKIKVIERLKARYGDLYTEKNVAISGIHTHA 77 (721)
Q Consensus 18 L~ARAlvl~d~~~~rvv~Vs~Dl~~i~~~v~~~Vr~~L~~~~G~~i~~~nVlIsATHTHS 77 (721)
+...+++|.+ ++..+ -+|... .......+.+.|++..+ ++.+.|+ -||.|.
T Consensus 46 ~~~n~~li~~--~~~~i--LID~G~-~~~~~~~l~~~l~~~~~--~~i~~vi--~TH~H~ 96 (243)
T 4hl2_A 46 VASNGLIVRD--GGRVL--VVDTAW-TDDQTAQILNWIKQEIN--LPVALAV--VTHAHQ 96 (243)
T ss_dssp EEEEEEEEEE--TTEEE--EESCCS-SHHHHHHHHHHHHHHTC--CCEEEEE--ECSSSH
T ss_pred ccceEEEEEE--CCcEE--EEECCC-CCccHHHHHHHHHHhhC--CCeeEEE--ECCCCc
Confidence 4567888877 33333 358763 44456778888887667 5555444 577775
No 20
>2v94_A RPS24, 30S ribosomal protein S24E; ribonucleoprotein; 1.90A {Pyrococcus abyssi} SCOP: d.12.1.3
Probab=28.13 E-value=57 Score=29.10 Aligned_cols=45 Identities=13% Similarity=0.095 Sum_probs=35.0
Q ss_pred EEEEeccCcccHHHHHHHHHHHHHHhCCCCCCCcEEEEeeccCCCCC
Q 004967 34 VFVNLDACMASQIVKIKVIERLKARYGDLYTEKNVAISGIHTHAGPG 80 (721)
Q Consensus 34 v~Vs~Dl~~i~~~v~~~Vr~~L~~~~G~~i~~~nVlIsATHTHSgP~ 80 (721)
+.+.+--.+-+.--..+|+++|++.|+ .+++.|+|-.-.||-|-+
T Consensus 27 ~~~~v~Hpg~~tpsk~eirekLA~~~~--~~~d~Vvv~~~~T~fG~g 71 (107)
T 2v94_A 27 IYFEIYHPGEPTPSRKDVKGKLVAMLD--LNPETTVIQYIRSYFGSY 71 (107)
T ss_dssp EEEEEECTTSCCCCHHHHHHHHHHHHT--CCGGGEEEEEEECCTTCS
T ss_pred EEEEEEeCCCCCCCHHHHHHHHHHHHC--CCCCEEEEEeeEecCCCc
Confidence 333333333344448899999999999 899999999999999877
No 21
>1uiz_A MIF, macrophage migration inhibitory factor; cytokine, tautomerase; 2.50A {Xenopus laevis} SCOP: d.80.1.3
Probab=27.25 E-value=70 Score=27.79 Aligned_cols=50 Identities=8% Similarity=0.004 Sum_probs=37.0
Q ss_pred EEEEeCCCCEEEEEEeccCc-ccHH----HHHHHHHHHHHHhCCCCCCCcEEEEeecc
Q 004967 23 FIVAEPQGNRVVFVNLDACM-ASQI----VKIKVIERLKARYGDLYTEKNVAISGIHT 75 (721)
Q Consensus 23 lvl~d~~~~rvv~Vs~Dl~~-i~~~----v~~~Vr~~L~~~~G~~i~~~nVlIsATHT 75 (721)
+++.. .....++|.+.+.. ...+ +..++-+.|++.+| +++++|.|.-+-.
T Consensus 48 ~~~~g-~~~~~~~v~i~~~~g~~~eqk~~l~~~i~~~l~~~lg--i~~~~v~I~~~e~ 102 (115)
T 1uiz_A 48 MSFGD-STDPCAVCSLCSIGKIGGPQNKSYTKLLCDILTKQLN--IPANRVYINYYDL 102 (115)
T ss_dssp EEETT-BCSSCEEEEEEESSCCSHHHHHHHHHHHHHHHHHHHC--CCGGGEEEEEEEC
T ss_pred eEECC-CCCCeEEEEEEEecCCCHHHHHHHHHHHHHHHHHHhC--cCcceEEEEEEEC
Confidence 44544 35788999998775 4544 66677778888899 9999999986544
No 22
>2xcz_A Possible ATLS1-like light-inducible protein; cytokine, tautomerase, immune system, cyanobacterium; 1.64A {Prochlorococcus marinus}
Probab=27.23 E-value=2.7e+02 Score=23.84 Aligned_cols=84 Identities=13% Similarity=0.054 Sum_probs=52.9
Q ss_pred cHHHHHHHHHHHHHHhCCCCCCCcEEEEeeccCC-CCCcCcccc-cccccc-cccchhHHHHHHHHHHHHHHHHHhcCCc
Q 004967 44 SQIVKIKVIERLKARYGDLYTEKNVAISGIHTHA-GPGGYLQYV-VYIVTS-LGFVRQSFDALVDGIEKSVLQAHENLRP 120 (721)
Q Consensus 44 ~~~v~~~Vr~~L~~~~G~~i~~~nVlIsATHTHS-gP~g~~~~~-l~~i~~-~g~~~~y~~~lv~~iv~AI~~A~~~l~P 120 (721)
...+.+++-+.|++.+| .|++.+++.-..... .++|-.... +-++.. .|..++--+.+...|.+++.+.. ...|
T Consensus 16 ~~~l~~~~~~~l~~~lg--kp~~~~~v~~~~~~~~~~~g~~~~~~~v~i~~~~g~t~eqk~~l~~~i~~~l~~~l-gi~~ 92 (115)
T 2xcz_A 16 ANSLLQELSSKLAELLG--KPEKYVMTSLQCGVPMTFSGNTEPTCYVEVKSIGALDGSRTQEVSELVCGHIEQNL-GIPA 92 (115)
T ss_dssp HHHHHHHHHHHHHHHHT--CCGGGCEEEEECSCCCCBTTBCSSCEEEEEEESSCCCTTHHHHHHHHHHHHHHHHH-CCCG
T ss_pred HHHHHHHHHHHHHHHHC--CChHHEEEEEECCCceEECCCCCcEEEEEEEEecCCCHHHHHHHHHHHHHHHHHHh-CcCc
Confidence 45678888888999999 999998888543221 333322221 223332 34667777888888888887765 5556
Q ss_pred EEEEEEEEEe
Q 004967 121 GSIFVNKGEL 130 (721)
Q Consensus 121 a~l~~g~g~~ 130 (721)
-++.+.-.+.
T Consensus 93 ~~v~I~~~e~ 102 (115)
T 2xcz_A 93 DRIYIGFEDV 102 (115)
T ss_dssp GGEEEEEEEC
T ss_pred ccEEEEEEEC
Confidence 5555544444
No 23
>1u9d_A Hypothetical protein VC0714; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics; 1.70A {Vibrio cholerae o1 biovar eltor str} SCOP: d.80.1.5
Probab=27.23 E-value=2.8e+02 Score=25.15 Aligned_cols=79 Identities=11% Similarity=0.010 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcEEEEe---eccCCCCCcCcccccccccccccchhHHHHHHHHHHHHHHHHHhcCCcEE
Q 004967 46 IVKIKVIERLKARYGDLYTEKNVAISG---IHTHAGPGGYLQYVVYIVTSLGFVRQSFDALVDGIEKSVLQAHENLRPGS 122 (721)
Q Consensus 46 ~v~~~Vr~~L~~~~G~~i~~~nVlIsA---THTHSgP~g~~~~~l~~i~~~g~~~~y~~~lv~~iv~AI~~A~~~l~Pa~ 122 (721)
.+...+.+.|++.++ .+.+++-|-. +.-|.| .+ . .+..+.-.|-.++--+.++..|.+++.++....+-+.
T Consensus 31 ~lS~~Lid~La~i~~--~~~e~fTle~i~s~~i~~G-~~-M--P~VeV~~fgRt~EqK~~la~~IT~av~~~~~~~e~V~ 104 (122)
T 1u9d_A 31 SLVPTLLNELSSLLS--TARNAFTFELINTQYFAEG-GV-Y--PMVEVLWFGREQQTQDQIAQVITDQIRQLLGADSHLA 104 (122)
T ss_dssp HHHHHHHHHHHHHHT--CCGGGCEEEECCCCCCCTT-CC-C--CEEEEEESCCCHHHHHHHHHHHHHHHHHHHCTTCCCE
T ss_pred HHhHHHHHHHHHHHC--CCcccEEEEEeeeEEEecC-CC-C--CEEEEEEcCCCHHHHHHHHHHHHHHHHHhCCCCceEE
Confidence 455567777888888 8999987655 444556 21 1 1122222245788888999999999999955444566
Q ss_pred EEEEEEEe
Q 004967 123 IFVNKGEL 130 (721)
Q Consensus 123 l~~g~g~~ 130 (721)
+-+..-.-
T Consensus 105 Vif~el~~ 112 (122)
T 1u9d_A 105 VVFIPLQR 112 (122)
T ss_dssp EEEEECCG
T ss_pred EEEEecCH
Confidence 66554433
No 24
>1xn9_A 30S ribosomal protein S24E; beta+alpha, GFT structural genomics, protein structure initiative, PSI, NESG, MAR11; NMR {Methanosarcina mazei} SCOP: d.12.1.3
Probab=26.94 E-value=64 Score=28.46 Aligned_cols=35 Identities=23% Similarity=0.147 Sum_probs=31.0
Q ss_pred cHHHHHHHHHHHHHHhCCCCCCCcEEEEeeccCCCCC
Q 004967 44 SQIVKIKVIERLKARYGDLYTEKNVAISGIHTHAGPG 80 (721)
Q Consensus 44 ~~~v~~~Vr~~L~~~~G~~i~~~nVlIsATHTHSgP~ 80 (721)
+.--..+|+++|++.|+ .+++.|+|-.-.||-|-+
T Consensus 28 ~tpsk~eirekLAk~~~--~~~~~Vvv~~~~t~fG~g 62 (101)
T 1xn9_A 28 STPSRNDVRNKLAAMLN--APLELLVIQRIKTEYGMQ 62 (101)
T ss_dssp SCCCHHHHHHHHHHHTT--CCTTTEEEEEEEECSSSS
T ss_pred CCCCHHHHHHHHHHHHC--CCCCEEEEEeeEecCCCc
Confidence 33347899999999999 899999999999999977
No 25
>1hfo_A Migration inhibitory factor; tautomerase; 1.65A {Trichinella spiralis} SCOP: d.80.1.3
Probab=26.49 E-value=74 Score=27.48 Aligned_cols=51 Identities=14% Similarity=0.167 Sum_probs=37.4
Q ss_pred EEEEEeCCCCEEEEEEeccCc-ccHH----HHHHHHHHHHHHhCCCCCCCcEEEEeecc
Q 004967 22 TFIVAEPQGNRVVFVNLDACM-ASQI----VKIKVIERLKARYGDLYTEKNVAISGIHT 75 (721)
Q Consensus 22 Alvl~d~~~~rvv~Vs~Dl~~-i~~~----v~~~Vr~~L~~~~G~~i~~~nVlIsATHT 75 (721)
.+++.. .....++|.+.+.. ...+ +..++-+.|++.+| +++++|+|.-+-.
T Consensus 46 ~~~~~g-~~~~~~~i~i~~~~g~~~eqk~~l~~~i~~~l~~~lg--i~~~~v~I~~~e~ 101 (113)
T 1hfo_A 46 QLSFGG-STNPAAFGTLMSIGGIEPSRNRDHSAKLFDHLNTKLG--IPKNRMYIHFVNL 101 (113)
T ss_dssp EEEETT-BCSSCEEEEEEESSSCSHHHHHHHHHHHHHHHHHHHC--CCGGGEEEEEEEC
T ss_pred cEEecC-CCCCeEEEEEEEecCCCHHHHHHHHHHHHHHHHHHhC--cCcCeEEEEEEEC
Confidence 345544 35788999998775 4544 66677788888899 9999999986544
No 26
>2v4i_A Glutamate N-acetyltransferase 2 alpha chain; cytoplasm, acyl enzyme, NTN hydrolase, acyltransferase, ornithine acetyl transferase; 2.2A {Streptomyces clavuligerus} PDB: 2vzk_A* 2w4n_A* 2yep_A*
Probab=25.96 E-value=59 Score=31.43 Aligned_cols=46 Identities=20% Similarity=0.209 Sum_probs=34.7
Q ss_pred EEEEEEEEeCCCCEEEEEEeccCcccH--HHHHHHHHHHHHHhCCCCCCCcEEEEeec
Q 004967 19 RARTFIVAEPQGNRVVFVNLDACMASQ--IVKIKVIERLKARYGDLYTEKNVAISGIH 74 (721)
Q Consensus 19 ~ARAlvl~d~~~~rvv~Vs~Dl~~i~~--~v~~~Vr~~L~~~~G~~i~~~nVlIsATH 74 (721)
.+||+|+.++ ..-.+-..+ .-..++.+.+++.+| +++++|++++|=
T Consensus 58 ~~rAvvvNSG--------nANA~TG~~G~~da~~~~~~~A~~lg--~~~~~Vlv~STG 105 (173)
T 2v4i_A 58 QARGVVVLAR--------NANVATGLEGEENAREVREAVARALG--LPEGEMLIASTG 105 (173)
T ss_dssp BCCEEEEEES--------CCCCSCHHHHHHHHHHHHHHHHHHTT--CCGGGEEEEEES
T ss_pred ceEEEEEcCC--------CccccccHHHHHHHHHHHHHHHHHhC--CCchhEEEecCc
Confidence 4688888775 344455544 445688899999999 999999999984
No 27
>1ywx_A 30S ribosomal protein S24E; GFT MRR16, nesgc, structural genomics, PSI, protein structure initiative; NMR {Methanococcus maripaludis} SCOP: d.12.1.3
Probab=25.52 E-value=67 Score=28.42 Aligned_cols=35 Identities=11% Similarity=0.025 Sum_probs=31.0
Q ss_pred cHHHHHHHHHHHHHHhCCCCCCCcEEEEeeccCCCCC
Q 004967 44 SQIVKIKVIERLKARYGDLYTEKNVAISGIHTHAGPG 80 (721)
Q Consensus 44 ~~~v~~~Vr~~L~~~~G~~i~~~nVlIsATHTHSgP~ 80 (721)
+.--..+|+++|++.|+ .+++.|++-.-.||-|-+
T Consensus 28 ~tpsk~eirekLAk~~~--~~~d~Vvv~~~~T~fG~g 62 (102)
T 1ywx_A 28 ATPSIKDVKMKLVAVLN--ANKQVLVVDTLDQIFGKL 62 (102)
T ss_dssp CCCCHHHHHHHHHHHHT--SCSTTEEEEEEEECSSSS
T ss_pred CCCCHHHHHHHHHHHHC--CCCCEEEEEccEecCCCc
Confidence 33347899999999999 899999999999999977
No 28
>4ank_A Transthyretin; hormone binding protein, thyroxine transport protein, hormon amyloidosis inhibition; 1.70A {Homo sapiens}
Probab=24.53 E-value=72 Score=30.01 Aligned_cols=41 Identities=17% Similarity=0.195 Sum_probs=24.1
Q ss_pred EEEEEeCCCceEEee---cCCCcceEEEEecCCCCCceeEEEEEEEcCCCCCCcceEEEEe
Q 004967 641 LVEILHGKDIWAPAY---DDDDFCLRFKWSRPSKLSARSMATIEWRIPDTAPLGVYRIRHF 698 (721)
Q Consensus 641 ~Ver~~~~~~W~~v~---~D~dw~t~~~W~r~~~~~~~s~~ti~W~ip~~~~~G~YRi~~~ 698 (721)
.+.|+..++.|+.++ ||+|=-+ . .|..+.+..+|+|||++.
T Consensus 51 ~L~~~~~~~~~~~l~~~~Td~DGR~----------------~-~ll~~~~~~~G~Y~L~F~ 94 (147)
T 4ank_A 51 HVFRKAADDTWEPFASGKTSESGEL----------------H-GLTTEEEFVEGIYKVEID 94 (147)
T ss_dssp EEEEECTTSCEEEEEEEECCTTSEE----------------C-CSCCTTTCCSEEEEEEEC
T ss_pred EEEEECCCCCeEEEEEEEeCCCCCC----------------C-CCCCccccCCceEEEEEE
Confidence 345655567788765 5555411 1 122344567899999974
No 29
>1axh_A Atracotoxin-HVI, ACTX-HVI; neurotoxin, insecticidal toxin, cystine knot, funnel-WEB; NMR {Hadronyche versuta} SCOP: g.3.6.2
Probab=23.90 E-value=32 Score=24.64 Aligned_cols=19 Identities=42% Similarity=1.032 Sum_probs=16.3
Q ss_pred ccccCCCCCCCCCCcCCCC
Q 004967 303 FCIDSGLPCDFNHSTCGGK 321 (721)
Q Consensus 303 ~c~d~g~~c~~~~s~c~g~ 321 (721)
-|+-+|+||-.+.+-|.|.
T Consensus 3 ~C~psgQPCpyne~CCs~s 21 (37)
T 1axh_A 3 TCIPSGQPCPYNENCCSQS 21 (37)
T ss_dssp CSBCTTSBCSSGGGBSSSC
T ss_pred ccccCCCcCCCcccccccc
Confidence 4888999999999988764
No 30
>3djh_A Macrophage migration inhibitory factor; homotrimer, cytokine, inflammatory response, isomerase, phosphoprotein; 1.25A {Homo sapiens} SCOP: d.80.1.3 PDB: 1ca7_A* 1ljt_A* 2ooh_A* 2ooz_A* 3b9s_A* 2oow_A* 3ce4_A 3dji_A* 3ijg_A* 3ijj_A* 3smb_A* 3smc_A* 3u18_A* 4f2k_A* 1gd0_A* 1gcz_A* 3jsf_A* 3jsg_A* 3jtu_A* 3l5p_A* ...
Probab=23.47 E-value=90 Score=27.26 Aligned_cols=49 Identities=10% Similarity=0.042 Sum_probs=37.7
Q ss_pred EEEEEeCCCCEEEEEEeccCcc-c----HHHHHHHHHHHHHHhCCCCCCCcEEEEee
Q 004967 22 TFIVAEPQGNRVVFVNLDACMA-S----QIVKIKVIERLKARYGDLYTEKNVAISGI 73 (721)
Q Consensus 22 Alvl~d~~~~rvv~Vs~Dl~~i-~----~~v~~~Vr~~L~~~~G~~i~~~nVlIsAT 73 (721)
.|.+.. ..+..+++.+-.++. . ..+..++-+.|++++| +++++|.|.-.
T Consensus 46 ~m~fgG-s~~P~a~~~v~sig~~~~~~n~~~s~~i~~~l~~~Lg--i~~~riyI~f~ 99 (114)
T 3djh_A 46 LMAFGG-SSEPCALCSLHSIGKIGGAQNRSYSKLLCGLLAERLR--ISPDRVYINYY 99 (114)
T ss_dssp EEEETT-BCSSCEEEEEEESSCCSHHHHHHHHHHHHHHHHHHHC--CCGGGEEEEEE
T ss_pred eEEEcC-cCCCEEEEEEEEccCCCHHHHHHHHHHHHHHHHHHhC--cCcceEEEEEE
Confidence 455544 367899999998775 3 3466788888899999 99999999754
No 31
>2wkb_A Macrophage migration inhibitory factor; cytokine; HET: CME; 1.78A {Plasmodium berghei} PDB: 3gad_A 3gac_A 2wkf_A*
Probab=21.31 E-value=81 Score=28.00 Aligned_cols=44 Identities=16% Similarity=0.150 Sum_probs=33.3
Q ss_pred CCEEEEEEeccCc-cc----HHHHHHHHHHHHHHhCCCCCCCcEEEEeecc
Q 004967 30 GNRVVFVNLDACM-AS----QIVKIKVIERLKARYGDLYTEKNVAISGIHT 75 (721)
Q Consensus 30 ~~rvv~Vs~Dl~~-i~----~~v~~~Vr~~L~~~~G~~i~~~nVlIsATHT 75 (721)
...+++|.+.+.. .. ..+..+|-+.|.+.+| +++++|+|.-+-.
T Consensus 54 ~dp~~~v~I~~~~g~t~eqk~~l~~~i~~~l~~~lg--i~~~~v~I~~~e~ 102 (125)
T 2wkb_A 54 NEGYCFVRLTSIGGINRSNNSLLADKITKILSNHLS--VKPRRVYIEFRDC 102 (125)
T ss_dssp CSSCEEEEEECC-----CTHHHHHHHHHHHHHHHHC--CCGGGEEEEEEC-
T ss_pred CCCcEEEEEEECCCCCHHHHHHHHHHHHHHHHHHhC--cCcceEEEEEEEC
Confidence 4678899998775 33 3577788888999999 9999999987654
No 32
>3fwu_A Macrophage migration inhibitory factor-like protein; homotrimer, tautomerase, cytokine; 1.80A {Leishmania major}
Probab=21.05 E-value=70 Score=29.13 Aligned_cols=44 Identities=14% Similarity=0.126 Sum_probs=36.9
Q ss_pred CCEEEEEEeccCccc-----HHHHHHHHHHHHHHhCCCCCCCcEEEEeecc
Q 004967 30 GNRVVFVNLDACMAS-----QIVKIKVIERLKARYGDLYTEKNVAISGIHT 75 (721)
Q Consensus 30 ~~rvv~Vs~Dl~~i~-----~~v~~~Vr~~L~~~~G~~i~~~nVlIsATHT 75 (721)
.+..++|.+-.++.- ..+..++.+.|++++| |++++|+|.-+=.
T Consensus 75 ~dP~a~v~i~sig~~~~e~n~~~s~~i~~~l~~~Lg--I~~~riyI~f~d~ 123 (133)
T 3fwu_A 75 TDPVACVRVEALGGYGPSEPEKVTSIVTAAITKECG--IVADRIFVLYFSP 123 (133)
T ss_dssp CSSCEEEEEECTTCCCTTHHHHHHHHHHHHHHHHHC--CCGGGEEEEEECC
T ss_pred CCCEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHhC--cChhhEEEEEEEH
Confidence 578899999877653 4677889999999999 9999999987766
No 33
>2g1d_A 30S ribosomal protein S24E; complete proteome, ribosome; NMR {Thermoplasma acidophilum} SCOP: d.12.1.3
Probab=20.14 E-value=58 Score=28.58 Aligned_cols=35 Identities=11% Similarity=0.119 Sum_probs=31.0
Q ss_pred cHHHHHHHHHHHHHHhCCCCCCCcEEEEeeccCCCCC
Q 004967 44 SQIVKIKVIERLKARYGDLYTEKNVAISGIHTHAGPG 80 (721)
Q Consensus 44 ~~~v~~~Vr~~L~~~~G~~i~~~nVlIsATHTHSgP~ 80 (721)
+.--..+|+++|++.|+ .+++.|+|-.-.||-|-+
T Consensus 29 ~tpsk~eirekLA~~~~--~~~~~vvv~~~~t~fG~g 63 (98)
T 2g1d_A 29 RTPSREEIKELIAKHEG--VDKELVIVDNNKQLTGKH 63 (98)
T ss_dssp SCCCHHHHHHHHHHHHH--SCSTTEECCCCCCCSSSS
T ss_pred CCCCHHHHHHHHHHHHC--CCCCEEEEEeeEecCCCc
Confidence 33447899999999999 899999999999999877
Done!