BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 004968
         (721 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|255546609|ref|XP_002514364.1| 1-deoxyxylulose-5-phosphate synthase, putative [Ricinus communis]
 gi|223546820|gb|EEF48318.1| 1-deoxyxylulose-5-phosphate synthase, putative [Ricinus communis]
          Length = 717

 Score = 1171 bits (3029), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 560/721 (77%), Positives = 635/721 (88%), Gaps = 4/721 (0%)

Query: 1   MVTPSAKYPLELPLTAHCHGTLDQRKIEFLSSNISRELEISRINLCPSSSSITSSKLVTV 60
           M T S +YP    +TAH        K++ LSS+   ++  S +NL   S+SIT+SK   V
Sbjct: 1   MGTASTQYPY--GITAHSFAKFGH-KLDTLSSSFPNKVGFSSVNLYQGSASITNSKGF-V 56

Query: 61  SRICALPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKS 120
            RIC++PD+DD FW+K PTPILD+VENP+ L +LT++ELK+LA EIR ELSSI+S+T+K+
Sbjct: 57  GRICSVPDLDDIFWEKVPTPILDVVENPIHLNNLTLQELKELADEIREELSSIMSRTQKA 116

Query: 121 LKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTS 180
            K+SLA VELTVA+HHVFHAPVDKILWDVGEQTYAHKILTGRRSL+HTLR+K+G+SG+TS
Sbjct: 117 FKASLAVVELTVAIHHVFHAPVDKILWDVGEQTYAHKILTGRRSLMHTLRQKNGLSGFTS 176

Query: 181 RSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGY 240
           +SESEYDPF AGHGCNSVSAGLGMAVARD+KGKRE +VTVISNGTTMAGQ YEAMSNAGY
Sbjct: 177 QSESEYDPFGAGHGCNSVSAGLGMAVARDMKGKRERVVTVISNGTTMAGQVYEAMSNAGY 236

Query: 241 LDSNMIVILNDSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGR 300
           +DSNMIVILNDSRHSLHPKIEE PKTS+NALSSTLSR+QSSKSFR+ RE AKG+TKRIGR
Sbjct: 237 IDSNMIVILNDSRHSLHPKIEEGPKTSLNALSSTLSRLQSSKSFRKFREAAKGVTKRIGR 296

Query: 301 GMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPV 360
           GMHE AAKVDEYARGMIGP GSTLFEELGLYYIGPVDGHNIEDL+ VLQEVASL SMGPV
Sbjct: 297 GMHELAAKVDEYARGMIGPLGSTLFEELGLYYIGPVDGHNIEDLVCVLQEVASLDSMGPV 356

Query: 361 LVHVVTEENRRAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKD 420
           L+HVVTEENRR ++ QK + +E  QEG+S+S+   +  ++RTY DCF+EAL+MEAEKDKD
Sbjct: 357 LIHVVTEENRRRDNKQKIDTLENLQEGSSNSDPFLYSIHTRTYSDCFVEALIMEAEKDKD 416

Query: 421 IVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQR 480
           IV+VHAGMEM+ + QL QE++P+R+FDVGMAEQHAVTFSAGL+CGGLKPFCIIPS FLQR
Sbjct: 417 IVIVHAGMEMETAFQLIQERYPDRFFDVGMAEQHAVTFSAGLSCGGLKPFCIIPSTFLQR 476

Query: 481 AYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELV 540
           AYDQVV+DVDQQR+PVRFVITSAGLVGSDGP QCGAFDITFMSCLPNMIVMAPSDEDELV
Sbjct: 477 AYDQVVHDVDQQRIPVRFVITSAGLVGSDGPMQCGAFDITFMSCLPNMIVMAPSDEDELV 536

Query: 541 DMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQ 600
           DMVAT   IDD PVCFRYPRGAIV TD     GIPIEIGKGKVL+EGKDVALLGYGAMVQ
Sbjct: 537 DMVATAVQIDDHPVCFRYPRGAIVGTDHYMRIGIPIEIGKGKVLIEGKDVALLGYGAMVQ 596

Query: 601 NCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHF 660
           NCLKAR LLSKLGI+VTVADARFCKPLD+KL+R+LC+NH FL+TVEEGS+GGFGSHV+ F
Sbjct: 597 NCLKARHLLSKLGIEVTVADARFCKPLDMKLLRQLCENHAFLVTVEEGSVGGFGSHVAQF 656

Query: 661 IALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLLM 720
           ++LDG LD  VKWRPIVLPD YIEHA P +QL LAGLTGHHIAAT L LLGRTREALLLM
Sbjct: 657 LSLDGQLDGKVKWRPIVLPDTYIEHALPKEQLNLAGLTGHHIAATVLRLLGRTREALLLM 716

Query: 721 C 721
           C
Sbjct: 717 C 717


>gi|224089136|ref|XP_002308644.1| predicted protein [Populus trichocarpa]
 gi|222854620|gb|EEE92167.1| predicted protein [Populus trichocarpa]
          Length = 657

 Score = 1114 bits (2881), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 536/659 (81%), Positives = 592/659 (89%), Gaps = 5/659 (0%)

Query: 65  ALPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSS 124
           ALPDIDD F D   TP+LD+VENP+ LK+LTIKELK LA EIRSELSSI+SKT+  LK+S
Sbjct: 1   ALPDIDDIFSDLIATPLLDVVENPIHLKNLTIKELKLLASEIRSELSSIMSKTQNDLKAS 60

Query: 125 LAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSES 184
           LA VELTVA+HHVFHAPVDKILWDVGEQTYAHKILTGRRSL+HTLR+KDG+SG+TSRSES
Sbjct: 61  LAVVELTVAIHHVFHAPVDKILWDVGEQTYAHKILTGRRSLMHTLRQKDGLSGFTSRSES 120

Query: 185 EYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSN 244
           EYDPF AGHGCNS+SAG+GMA+ARDIKGKRE IVTVI NGTTMAGQ YEAM NAGYLD+N
Sbjct: 121 EYDPFGAGHGCNSISAGIGMAIARDIKGKRERIVTVIGNGTTMAGQVYEAMGNAGYLDTN 180

Query: 245 MIVILNDSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHE 304
           MIVILNDSRHSLHPKIEE  KTSI ALSSTLS++QSSKSFR+LREVAKG+TKRIG  MHE
Sbjct: 181 MIVILNDSRHSLHPKIEEGSKTSITALSSTLSKLQSSKSFRRLREVAKGVTKRIG--MHE 238

Query: 305 WAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHV 364
            AAKVDEYARGM+GP GSTLFEELGLYYIGPVDGHNI +L+ VLQEV+SL SMGPVL+HV
Sbjct: 239 LAAKVDEYARGMMGPLGSTLFEELGLYYIGPVDGHNIGELVCVLQEVSSLDSMGPVLIHV 298

Query: 365 VTEENRRAEDTQKSEAIEKQQEG---ASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDI 421
           +TEEN+  E  Q SEA+E QQEG   + DSN L +  ++RTY DCF+EAL+MEAEKDKDI
Sbjct: 299 ITEENQCTEYKQPSEAMENQQEGILSSFDSNELLYSMHARTYSDCFVEALIMEAEKDKDI 358

Query: 422 VVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRA 481
           V+VHAGMEMD S QLF+E+FP+R+FD+GMAEQHAVTFSAGL+CGGLKPFCIIPSAF+QRA
Sbjct: 359 VIVHAGMEMDPSFQLFRERFPDRFFDLGMAEQHAVTFSAGLSCGGLKPFCIIPSAFMQRA 418

Query: 482 YDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVD 541
           YDQVV+DVD+QR+PVRFVITSAGLVGSDGPT CGAFDITFMSCLPNMIVMAPSDEDELVD
Sbjct: 419 YDQVVHDVDRQRIPVRFVITSAGLVGSDGPTMCGAFDITFMSCLPNMIVMAPSDEDELVD 478

Query: 542 MVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQN 601
           MVAT    DD P+CFRYPRGAIV TD     GIPIEIGKGK+L+EGKDVALLGYG MVQN
Sbjct: 479 MVATAVHSDDHPICFRYPRGAIVGTDHYTRSGIPIEIGKGKILIEGKDVALLGYGEMVQN 538

Query: 602 CLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFI 661
           CL+ARALLSKLGI+VTVADARFCKPLD+KL+R+LC+NH FL+TVEEGSIGGFGSHVS FI
Sbjct: 539 CLRARALLSKLGIEVTVADARFCKPLDMKLLRQLCENHAFLVTVEEGSIGGFGSHVSQFI 598

Query: 662 ALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLLM 720
           ALDG LD   KWRPIVLPD YIEHA P +QLALAGLTGHHIAAT L LLGRTREALLLM
Sbjct: 599 ALDGQLDGRTKWRPIVLPDKYIEHALPKEQLALAGLTGHHIAATVLRLLGRTREALLLM 657


>gi|449441938|ref|XP_004138739.1| PREDICTED: 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic-like [Cucumis sativus]
 gi|449499272|ref|XP_004160772.1| PREDICTED: 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic-like [Cucumis sativus]
          Length = 717

 Score = 1093 bits (2828), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 532/722 (73%), Positives = 613/722 (84%), Gaps = 6/722 (0%)

Query: 1   MVTPSAKYPLELPLTAHCHGTLDQRKIEFLSSNISRELEISRINLCPSSSSITS-SKLVT 59
           M T S  YP    + ++ +  L  RK+EF  SN     E SRIN  P+S S+   S   +
Sbjct: 1   MGTASTGYPFGTAVHSYGNSALLSRKLEFSRSNFPFPAEFSRIN--PNSGSVFHFSSKSS 58

Query: 60  VSRICALPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEK 119
           V +I +LPDID+ FWDK PTP+LD+++NP+ LK+L++KELKQLA EIRSEL+S +S    
Sbjct: 59  VCKIHSLPDIDNIFWDKVPTPLLDVIDNPIHLKNLSLKELKQLAEEIRSELASFLSNVPA 118

Query: 120 SLKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYT 179
           S K+SLA VELTVALHHVFHAPVDKILWD GE+TYAHKILTGRR L+ TL KK+G+SG T
Sbjct: 119 SYKASLAVVELTVALHHVFHAPVDKILWDAGEETYAHKILTGRRPLMSTLYKKNGLSGST 178

Query: 180 SRSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAG 239
           SR ESE+DPF A HGCNSVSAGLGMAVARDIKGKRE IVT+I+N +TM GQ YEAMSN G
Sbjct: 179 SRLESEFDPFGAAHGCNSVSAGLGMAVARDIKGKRERIVTIINNLSTMTGQIYEAMSNVG 238

Query: 240 YLDSNMIVILNDSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIG 299
           YLDSNMIVILNDSRHSLHPK+++  KTS++ALSSTLSR+QSSKSFR+ RE AKG+TKRIG
Sbjct: 239 YLDSNMIVILNDSRHSLHPKLDDGSKTSVSALSSTLSRLQSSKSFRKFREAAKGVTKRIG 298

Query: 300 RGMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGP 359
           +GMHE AAKVD+YARGM+GP GSTLFEELGLYYIGPVDGHN+EDLI VLQEVASL SMGP
Sbjct: 299 KGMHELAAKVDQYARGMMGPSGSTLFEELGLYYIGPVDGHNMEDLICVLQEVASLDSMGP 358

Query: 360 VLVHVVTEENRRAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDK 419
           VLVHVVTEEN  +E  ++     +Q +G  + + L +G  SRTY DCF EALV+EAEKDK
Sbjct: 359 VLVHVVTEENY-SEGYKRVAG--RQLDGLYNIDPLLYGIDSRTYGDCFAEALVVEAEKDK 415

Query: 420 DIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQ 479
            IV VHAGM+M+ S+QLF+E+FP+++FDVGMAEQHAVTF+AGL+CGGLKPFC+IPSAFLQ
Sbjct: 416 SIVTVHAGMQMEPSIQLFRERFPDKFFDVGMAEQHAVTFAAGLSCGGLKPFCVIPSAFLQ 475

Query: 480 RAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDEL 539
           RAYDQVV+DVDQQR+PVRFVITSAGLVGSDGPTQCGAFDIT+MSCLPNMIVMAPSDE+EL
Sbjct: 476 RAYDQVVHDVDQQRIPVRFVITSAGLVGSDGPTQCGAFDITYMSCLPNMIVMAPSDENEL 535

Query: 540 VDMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMV 599
           V MVAT A IDD+PVCFRYPRG+IV T+     G+PIEIGKG+VL EGKD+ALLGYGAMV
Sbjct: 536 VHMVATAARIDDQPVCFRYPRGSIVTTNNLALEGVPIEIGKGRVLAEGKDIALLGYGAMV 595

Query: 600 QNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSH 659
           QNCL ARALLSK G++VTVADARFCKPLDI L+R+LC NH FLITVEEGS+GGFGSHV+ 
Sbjct: 596 QNCLNARALLSKFGVEVTVADARFCKPLDIALLRQLCDNHAFLITVEEGSVGGFGSHVAQ 655

Query: 660 FIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLL 719
           FIALDG LD  VKWRPIVLPDNYIE ASP QQL+LAGLTG+HIAATALSLLGR REALL+
Sbjct: 656 FIALDGRLDGRVKWRPIVLPDNYIEQASPQQQLSLAGLTGNHIAATALSLLGRPREALLM 715

Query: 720 MC 721
           MC
Sbjct: 716 MC 717


>gi|359476100|ref|XP_002282428.2| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic-like [Vitis vinifera]
 gi|296081990|emb|CBI20995.3| unnamed protein product [Vitis vinifera]
          Length = 719

 Score = 1084 bits (2804), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 533/722 (73%), Positives = 605/722 (83%), Gaps = 6/722 (0%)

Query: 1   MVTPSAKYPLELPLTAHCHGTLD--QRKIEFLSSNISRELEISRINLCPSSSSITSSKLV 58
           M T  A+YP E+  TAH          K +F S N   +L+ SR+NL P SSS TSSK  
Sbjct: 1   MGTACAQYPFEV--TAHFQEKCRVLHPKTKFSSFNFPPKLDSSRMNLYPCSSSTTSSKRY 58

Query: 59  TVSRICALPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTE 118
            V +IC+LP+  DFFWD+ PTP+LD+VE+P+ LK+LT KELKQLA EIR EL  I+SK +
Sbjct: 59  -VGQICSLPEFGDFFWDRIPTPMLDMVESPMCLKNLTPKELKQLADEIRVELFCIMSKMQ 117

Query: 119 KSLKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGY 178
           K  K+SLA VELTVA+H++FHAP+DKILWDVGE TYAHKILTGRR+L+HTLR++ G+SG+
Sbjct: 118 KPFKASLAVVELTVAIHYIFHAPMDKILWDVGEVTYAHKILTGRRALMHTLRERGGLSGF 177

Query: 179 TSRSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNA 238
           TSRSESEYDPF AGHGC+S+SAGLGMAVARD+KGKRE IVTVI NGTTMAGQ YEAM NA
Sbjct: 178 TSRSESEYDPFGAGHGCSSISAGLGMAVARDLKGKRERIVTVIGNGTTMAGQVYEAMGNA 237

Query: 239 GYLDSNMIVILNDSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRI 298
           GYLD+NM+VILNDSRHSLHPK+E+   T INALSSTL+++QSSKSFR+ RE AKG+TKRI
Sbjct: 238 GYLDTNMVVILNDSRHSLHPKLEDGQATPINALSSTLTKLQSSKSFRKFREAAKGVTKRI 297

Query: 299 GRGMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMG 358
           G+GMHE AAKVDEYARGM+GP G+TLFEELGLYYIGPVDGHNIEDLISVLQ VASL   G
Sbjct: 298 GKGMHELAAKVDEYARGMVGPLGATLFEELGLYYIGPVDGHNIEDLISVLQGVASLDPTG 357

Query: 359 PVLVHVVTEENRRAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKD 418
           PVLVHV+T+E +  E +QKS       +G   S   P+    R Y DCF+EALV EAEKD
Sbjct: 358 PVLVHVITKEYQGVEASQKSMISNGHLKGFYTSELSPY-PLPRMYSDCFVEALVNEAEKD 416

Query: 419 KDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFL 478
           KDIVVVHAGM M+  LQLFQEKFP ++FDVGMAEQHAVTFSAGLACGGLKPFCIIPS FL
Sbjct: 417 KDIVVVHAGMGMEPPLQLFQEKFPYKFFDVGMAEQHAVTFSAGLACGGLKPFCIIPSTFL 476

Query: 479 QRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDE 538
           QRAYDQVV+DVD+QR+PVRF ITSAGLVGSDGPT+CGAFDITFMSCLPNMIVMAPSDE+E
Sbjct: 477 QRAYDQVVHDVDRQRIPVRFAITSAGLVGSDGPTRCGAFDITFMSCLPNMIVMAPSDENE 536

Query: 539 LVDMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAM 598
           L+ MVAT A +DDRP+CFRYPRGA        + GIPIEIGKGKVL+EGKDVALLGYG M
Sbjct: 537 LMHMVATAAHVDDRPICFRYPRGATAGMSNSIWNGIPIEIGKGKVLIEGKDVALLGYGVM 596

Query: 599 VQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVS 658
           VQNCLKA +LLS+LGI VTVADARFCKPLDI+LVRELC+NH FLITVEEGS+GGFGSHV+
Sbjct: 597 VQNCLKAWSLLSELGIRVTVADARFCKPLDIQLVRELCENHAFLITVEEGSVGGFGSHVA 656

Query: 659 HFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALL 718
            FIALDG LD  +KWRPI LPDNYIE ASP +QLA+AGLTGHHIAAT LSLLGR REALL
Sbjct: 657 QFIALDGKLDGRIKWRPIALPDNYIEQASPEEQLAIAGLTGHHIAATVLSLLGRNREALL 716

Query: 719 LM 720
           LM
Sbjct: 717 LM 718


>gi|357466311|ref|XP_003603440.1| hypothetical protein MTR_3g107740 [Medicago truncatula]
 gi|355492488|gb|AES73691.1| hypothetical protein MTR_3g107740 [Medicago truncatula]
          Length = 708

 Score = 1078 bits (2789), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 524/721 (72%), Positives = 606/721 (84%), Gaps = 15/721 (2%)

Query: 1   MVTPSAKYPLELPLTAHCHGTLDQRKIEFLSSNISRELEISRINLCPSSSSITSSKLVTV 60
           M T  A+YP  +P               F S  ++R L+ S      S  + +SS  + +
Sbjct: 2   MGTVCARYPFVIP---------------FHSQTLTRRLDCSISQFPLSRITYSSSSRILI 46

Query: 61  SRICALPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKS 120
            R+C+ PDIDDF+W+K PTPILD V+NPL LK+L+ +ELKQLA EIR ELSSI+S T+  
Sbjct: 47  HRVCSRPDIDDFYWEKVPTPILDTVQNPLCLKNLSQQELKQLAAEIRLELSSILSGTQIL 106

Query: 121 LKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTS 180
           L  S+A V+LTVA+HHVFHAPVDKILWDVG+QTYAHKILTGRRSL+ T+RKK+G+SG+TS
Sbjct: 107 LNPSMAVVDLTVAIHHVFHAPVDKILWDVGDQTYAHKILTGRRSLMKTIRKKNGLSGFTS 166

Query: 181 RSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGY 240
           R ESEYD F AGHGCNS+SAGLGMAVARDIKG+RE +V VISN TTM+GQ YEAMSNAGY
Sbjct: 167 RFESEYDAFGAGHGCNSISAGLGMAVARDIKGRRERVVAVISNWTTMSGQVYEAMSNAGY 226

Query: 241 LDSNMIVILNDSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGR 300
           LDSN++VILNDSRHSL PKIE+  KTS+NALSSTLSR+QSSKSFR+ RE AKG+TKRIGR
Sbjct: 227 LDSNLVVILNDSRHSLLPKIEDGSKTSVNALSSTLSRLQSSKSFRKFREAAKGVTKRIGR 286

Query: 301 GMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPV 360
           GMHE AAKVDEYARGM+GP GSTLFEELGLYYIGPVDGHNIEDLISVLQEVASL SMGPV
Sbjct: 287 GMHELAAKVDEYARGMMGPPGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLDSMGPV 346

Query: 361 LVHVVTEENRRAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKD 420
           L+HV+T EN+  E  +KS   +KQQ+ +   + L      +TY DCF+E+LV EAEKDKD
Sbjct: 347 LIHVITNENQVEEHNKKSYMTDKQQDESVSFDLLDNAGRLQTYGDCFVESLVAEAEKDKD 406

Query: 421 IVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQR 480
           IVVVHAG+  + SL+LF EKFP+R F+VG+AEQHAVTF++GL+CGGLKPFCIIPS+FLQR
Sbjct: 407 IVVVHAGITTEPSLKLFMEKFPDRIFNVGIAEQHAVTFASGLSCGGLKPFCIIPSSFLQR 466

Query: 481 AYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELV 540
           AYDQVV+DVDQQ++PVRFVITSAGLVGSDGP QCGAFDITFMSCLPNMIVMAPSDE ELV
Sbjct: 467 AYDQVVHDVDQQKVPVRFVITSAGLVGSDGPLQCGAFDITFMSCLPNMIVMAPSDEAELV 526

Query: 541 DMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQ 600
            MVAT A I+D+PVCFRYPRGA+V  D     GIPIEIGKG++LVEGKDVALLGYG+MVQ
Sbjct: 527 HMVATAAHINDQPVCFRYPRGALVGKDEAILDGIPIEIGKGRILVEGKDVALLGYGSMVQ 586

Query: 601 NCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHF 660
           NCLKA +LL+ LGI+VTVADARFCKPLDI+L+R+LC++H+FLITVEEGSIGGFGSHV+ F
Sbjct: 587 NCLKAYSLLANLGIEVTVADARFCKPLDIELLRQLCKHHSFLITVEEGSIGGFGSHVAQF 646

Query: 661 IALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLLM 720
           IALDGLLD  +KWRPIVLPD+YIEHASP QQL  AGLTGHHIAATALSLLGRTREAL  M
Sbjct: 647 IALDGLLDRRIKWRPIVLPDSYIEHASPNQQLNQAGLTGHHIAATALSLLGRTREALSFM 706

Query: 721 C 721
           C
Sbjct: 707 C 707


>gi|356518258|ref|XP_003527796.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic-like [Glycine max]
          Length = 716

 Score = 1065 bits (2755), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 520/722 (72%), Positives = 616/722 (85%), Gaps = 14/722 (1%)

Query: 3   TPSAKYPLELPLTAHCHGTLDQRKIEFLSSNISREL--EISRINLCPSSSSITSSKLVTV 60
           TPS+ YP   P  +H       R+++  +S     L  ++S I++CP S+S        V
Sbjct: 5   TPSSTYPFGTPFHSH------TRRLDCSTSTSMFPLHSDLSTISMCPRSASKG-----LV 53

Query: 61  SRICALPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKS 120
            R+ A  D DD+  +K PTPILD+VENPL LK+L++KELKQLAVEIRS+LSSI+S T+ S
Sbjct: 54  DRVYAQLDGDDYHREKVPTPILDMVENPLCLKNLSLKELKQLAVEIRSDLSSIMSGTQIS 113

Query: 121 LKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTS 180
            K+S+A VELTVA+HHVF+APVDKILWDVG+QTYAHKILTGRRSL+ T+R+K+G+SG+TS
Sbjct: 114 PKASMAVVELTVAIHHVFNAPVDKILWDVGDQTYAHKILTGRRSLMTTMRRKNGLSGFTS 173

Query: 181 RSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGY 240
           R ESEYD F AGHGCNS+SAGLGMAVARDIKG++E +V VISN TTMAGQAYEAMSNAGY
Sbjct: 174 RFESEYDAFGAGHGCNSISAGLGMAVARDIKGRQERVVAVISNWTTMAGQAYEAMSNAGY 233

Query: 241 LDSNMIVILNDSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGR 300
           LDSNM+VILNDSRHSL PKIEE PKTS+NALSSTLS++QSSKSFR+ RE AKG+TKRIGR
Sbjct: 234 LDSNMVVILNDSRHSLLPKIEEGPKTSVNALSSTLSKLQSSKSFRRFREAAKGVTKRIGR 293

Query: 301 GMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPV 360
           GMHE AAKVDEYARGM+GP GSTLFEELGLYYIGPVDGHNIEDLI VLQEVASL SMGPV
Sbjct: 294 GMHELAAKVDEYARGMMGPLGSTLFEELGLYYIGPVDGHNIEDLICVLQEVASLDSMGPV 353

Query: 361 LVHVVTEENRRAEDTQKSE-AIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDK 419
           LVHV+T+EN+  +++QKS+ + E++ EG   S+ L    + +TY +CF+  LV EAEKDK
Sbjct: 354 LVHVITDENQGDDNSQKSDMSDEQKNEGFVKSDLLDNPVWPQTYGNCFVATLVAEAEKDK 413

Query: 420 DIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQ 479
           DI+VVHAG+ M+ SL+LFQEKFP+R+FDVGMAEQHAVTF++GLACGGLKPFC+IPS+FLQ
Sbjct: 414 DIIVVHAGLTMEPSLELFQEKFPDRFFDVGMAEQHAVTFASGLACGGLKPFCVIPSSFLQ 473

Query: 480 RAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDEL 539
           RAYDQVV+DVDQQR+PVRFVITSAGLVGSDGP +CGAFDI FMSCLPNMIVMAPSDE EL
Sbjct: 474 RAYDQVVHDVDQQRIPVRFVITSAGLVGSDGPLRCGAFDINFMSCLPNMIVMAPSDELEL 533

Query: 540 VDMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMV 599
           + MVAT   I+++P+CFRYPRGA+V        GIPI+IG+G+VLVEGKDVA LGYG+MV
Sbjct: 534 MHMVATATRINNQPICFRYPRGALVGEGYTIGDGIPIKIGRGRVLVEGKDVAFLGYGSMV 593

Query: 600 QNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSH 659
           QNCLKA +LL+KLGI+VTVADARFCKPLDI L+R+LC++H+FL+TVEEGSIGGFGSHV+ 
Sbjct: 594 QNCLKAHSLLAKLGIEVTVADARFCKPLDIMLLRQLCKHHSFLVTVEEGSIGGFGSHVAQ 653

Query: 660 FIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLL 719
           FIA++GLLD  +KWRPIVLPD YIEHASP +QL  AGL+GHHIAATALSLLGRTREALL 
Sbjct: 654 FIAVNGLLDGRIKWRPIVLPDRYIEHASPNEQLDQAGLSGHHIAATALSLLGRTREALLF 713

Query: 720 MC 721
           MC
Sbjct: 714 MC 715


>gi|356509936|ref|XP_003523698.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic-like [Glycine max]
          Length = 716

 Score = 1064 bits (2751), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 518/721 (71%), Positives = 614/721 (85%), Gaps = 14/721 (1%)

Query: 4   PSAKYPLELPLTAHCHGTLDQRKIEFLSSN--ISRELEISRINLCPSSSSITSSKLVTVS 61
           PS+ YP  +P  +H       R+++  +S        ++S I++CP S+S        V 
Sbjct: 6   PSSAYPFGIPFHSH------SRRVDCSTSTSMFPIHADLSTISMCPRSASKG-----LVD 54

Query: 62  RICALPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSL 121
           ++ A  D DD++ +K PTPILD+VENPL LK+L+++ELKQLAVEIRS+LSSI+S T+ S 
Sbjct: 55  QVYAQLDNDDYYREKVPTPILDMVENPLCLKNLSLQELKQLAVEIRSDLSSIMSGTQISP 114

Query: 122 KSSLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSR 181
           K+S+A VELTVA+HHVF+APVDKILWDVG+QTYAHKILTGRRSL+ T+R+K+G+SG TSR
Sbjct: 115 KASMAVVELTVAIHHVFNAPVDKILWDVGDQTYAHKILTGRRSLMTTMRRKNGLSGVTSR 174

Query: 182 SESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL 241
            ESEYD F AGHGC+S+SAGLGMAVARDIKG+RE ++ VISN TTMAGQAYEAMSNAGYL
Sbjct: 175 FESEYDAFGAGHGCSSISAGLGMAVARDIKGRRERVIAVISNWTTMAGQAYEAMSNAGYL 234

Query: 242 DSNMIVILNDSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRG 301
           DSNM+VILNDSRHSL PKIEE PKT +NALSSTLS++QSSKSFR+ RE AKG+TKRIGRG
Sbjct: 235 DSNMVVILNDSRHSLLPKIEEGPKTFVNALSSTLSKLQSSKSFRRFREAAKGVTKRIGRG 294

Query: 302 MHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVL 361
           MHE AAKVDEYARGM+GP GSTLFEELGLYYIGPVDGHNIEDLI VLQEVASL SMGPVL
Sbjct: 295 MHELAAKVDEYARGMMGPLGSTLFEELGLYYIGPVDGHNIEDLICVLQEVASLDSMGPVL 354

Query: 362 VHVVTEENRRAEDTQKSEAIEKQQ-EGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKD 420
           VHV+T+EN+  E++QKS+  + QQ EG+  S+SL      +TY +CF+E LV+EAEKDKD
Sbjct: 355 VHVITDENQGDENSQKSDISDGQQDEGSVKSDSLDNPVRPQTYGNCFVETLVVEAEKDKD 414

Query: 421 IVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQR 480
           IVVVHAG+ M+ SL+LFQEKFP+R+FDVGMAEQHAVTF++GLACGGLKPFC+I S+FLQR
Sbjct: 415 IVVVHAGLTMEPSLELFQEKFPDRFFDVGMAEQHAVTFASGLACGGLKPFCVIASSFLQR 474

Query: 481 AYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELV 540
           AYDQVV+DVDQQR+PVRFVITSAGLVGSDGP QCGAFDI FMSCLPNMIVMAPSDE EL+
Sbjct: 475 AYDQVVHDVDQQRIPVRFVITSAGLVGSDGPLQCGAFDINFMSCLPNMIVMAPSDEVELM 534

Query: 541 DMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQ 600
            MVAT   I+ +P+CFRYPRGA+V        GIPI+IG+G+VLVEGKDVA LGYG+MVQ
Sbjct: 535 HMVATATRINSQPICFRYPRGALVGRGYTISDGIPIKIGRGRVLVEGKDVAFLGYGSMVQ 594

Query: 601 NCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHF 660
           NCLKA +LL+KLGI+VTVADARFCKPLDIKL+R+LC++H+FL+TVEEGSIGGFGS V+ F
Sbjct: 595 NCLKAHSLLAKLGIEVTVADARFCKPLDIKLLRQLCKHHSFLVTVEEGSIGGFGSQVAQF 654

Query: 661 IALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLLM 720
           IA++GLLD  ++WRPIVLPD YIEHASP +QL  AGL+GHHIAATALSLLGRTREALL M
Sbjct: 655 IAVNGLLDGRIQWRPIVLPDRYIEHASPNEQLDQAGLSGHHIAATALSLLGRTREALLFM 714

Query: 721 C 721
           C
Sbjct: 715 C 715


>gi|408537469|gb|AFU75320.1| 1-deoxy-D-xylulose-5-phosphate synthase 1 [Aquilaria sinensis]
          Length = 712

 Score = 1048 bits (2710), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 513/718 (71%), Positives = 600/718 (83%), Gaps = 12/718 (1%)

Query: 4   PSAKYPLELPLTAHCHGTLDQRKIEFLSSNISRELEISRINLCPSSSSITSSKLVTVSRI 63
           P+ +YP  +    H HG    R      +++S  +  SR+ + P   S  S+  +  +R 
Sbjct: 5   PATQYPHGI--GGHFHGKFAYR------ADVSSSIFPSRLEI-PKYKSQFSNPKILANRT 55

Query: 64  CALPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKS 123
            ALPD D FF +K PTP+LD+VE+P+ LK+L+IKEL+QLA EIR ELSSI+ KT+KS+KS
Sbjct: 56  YALPDCDGFFGEKVPTPLLDVVESPIHLKNLSIKELRQLADEIRLELSSIIPKTQKSIKS 115

Query: 124 SLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSE 183
           SLAAVELTVA+HHVF APVDKILWD  EQT+AHKILTGRRS +++L K   +  + S+SE
Sbjct: 116 SLAAVELTVAIHHVFQAPVDKILWDSVEQTHAHKILTGRRSCLNSLTKTSNLPSFASQSE 175

Query: 184 SEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDS 243
           +EYDPF AGHGC+S+SAGLGMA ARDIKGKRE +VTVI+N TTMAGQ YEAMSNAGYLD 
Sbjct: 176 NEYDPFGAGHGCSSISAGLGMAAARDIKGKRERVVTVINNDTTMAGQVYEAMSNAGYLDC 235

Query: 244 NMIVILNDSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMH 303
           NM+VILNDSRHSLHPKIEE PKTSIN LSSTLS+IQSSKSFR  REVAKG+TKRIGRGMH
Sbjct: 236 NMVVILNDSRHSLHPKIEEGPKTSINMLSSTLSKIQSSKSFRTFREVAKGVTKRIGRGMH 295

Query: 304 EWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVH 363
           EWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDL+ VLQEVASL S GPVLVH
Sbjct: 296 EWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLVGVLQEVASLDSTGPVLVH 355

Query: 364 VVTEENRRAE-DTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIV 422
           V+TEEN  +  D +K++ +  QQEG++ S S    ++ RTY DCF+EAL+MEA +DKDIV
Sbjct: 356 VITEENEASNIDQKKTQGM--QQEGSTSSCSFLSTDHCRTYSDCFVEALLMEAVRDKDIV 413

Query: 423 VVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAY 482
           VVHAGM ++ SL L+QE+FP+++FDVGMAEQHAVTF+AGL+ GGLKPFCIIPS FLQRAY
Sbjct: 414 VVHAGMGLEPSLHLYQERFPDKFFDVGMAEQHAVTFAAGLSRGGLKPFCIIPSTFLQRAY 473

Query: 483 DQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDM 542
           DQVV+DVD+Q +PVRFV+T AGLVGSDGP Q GAFDITFMSCLPNMIVMAPS E+EL  M
Sbjct: 474 DQVVHDVDRQMIPVRFVVTGAGLVGSDGPLQSGAFDITFMSCLPNMIVMAPSSEEELARM 533

Query: 543 VATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNC 602
           VAT A IDD+P+CFRYPRGA+V T+     GIP++IG+GK+L+EGKDVALLGYGAMVQNC
Sbjct: 534 VATAAQIDDQPICFRYPRGAVVGTECYFPSGIPLQIGEGKLLIEGKDVALLGYGAMVQNC 593

Query: 603 LKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIA 662
           LKA+ LLSKLG+DVTVADARFCKPLDI+L+R+LC+NH  LITVEEGSIGGFGSHV+ F+A
Sbjct: 594 LKAQILLSKLGVDVTVADARFCKPLDIELLRKLCENHDILITVEEGSIGGFGSHVAQFLA 653

Query: 663 LDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLLM 720
           LDGLLD  +KWRPIVLPD YIE A P +QL  AGLTGHHIAATAL+LLGR REAL LM
Sbjct: 654 LDGLLDGRLKWRPIVLPDKYIEQALPGEQLEDAGLTGHHIAATALTLLGRNREALQLM 711


>gi|224141855|ref|XP_002324277.1| predicted protein [Populus trichocarpa]
 gi|222865711|gb|EEF02842.1| predicted protein [Populus trichocarpa]
          Length = 612

 Score = 1023 bits (2646), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 495/614 (80%), Positives = 545/614 (88%), Gaps = 8/614 (1%)

Query: 114 VSKTEKSLKSSLAAVELTVALHHVFHAPVDKILWDV---GEQTYAHKILTGRRSLIHTLR 170
           +SK +K  K+SLAAVELTVA+HHVFHAPVDKILWD      QTYAHKILTGRRSL+HTLR
Sbjct: 1   MSKAQKDFKASLAAVELTVAIHHVFHAPVDKILWDFLVSCRQTYAHKILTGRRSLMHTLR 60

Query: 171 KKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQ 230
           +KDG+SG+TSRSESEYDPF AGHGCNS+SAGLGMAVARDIKGKRE IVTVI NGTTMAGQ
Sbjct: 61  QKDGLSGFTSRSESEYDPFGAGHGCNSISAGLGMAVARDIKGKREHIVTVIGNGTTMAGQ 120

Query: 231 AYEAMSNAGYLDSNMIVILNDSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREV 290
            YEAM NAGYLDSNMIVILNDSRHSLHPKIEE  KTSINALSSTLS++QSSKSFR+LREV
Sbjct: 121 VYEAMGNAGYLDSNMIVILNDSRHSLHPKIEEGSKTSINALSSTLSKLQSSKSFRRLREV 180

Query: 291 AKGMTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQE 350
           AKG+TKRIG  M+E AAKVDEYARGM+GP GSTLFEELGLYYIGPVDGHNIEDL+ VLQE
Sbjct: 181 AKGVTKRIG--MYELAAKVDEYARGMMGPLGSTLFEELGLYYIGPVDGHNIEDLVCVLQE 238

Query: 351 VASLGSMGPVLVHVVTEENRRAEDTQKSEAIEKQQEG---ASDSNSLPFGNYSRTYDDCF 407
           V++L SMGPVL+HV+TEEN+ AE  Q++EA+  QQEG    S   ++    +++TY DCF
Sbjct: 239 VSTLESMGPVLIHVITEENQCAEHKQQTEAMGNQQEGMFSVSAGYAVLSNMHTQTYSDCF 298

Query: 408 IEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGL 467
           +EAL+MEAEKDKDIVVVHAG EM+ S QLFQE+FP R+F VGMAEQHAVTFSAGL+CGGL
Sbjct: 299 VEALIMEAEKDKDIVVVHAGKEMEPSFQLFQERFPHRFFYVGMAEQHAVTFSAGLSCGGL 358

Query: 468 KPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPN 527
           KPFCIIPSAFLQRAYDQVV+DVDQQR+PVRFVITSAGLVG DGPT CGAFDITFMSCLPN
Sbjct: 359 KPFCIIPSAFLQRAYDQVVHDVDQQRIPVRFVITSAGLVGPDGPTMCGAFDITFMSCLPN 418

Query: 528 MIVMAPSDEDELVDMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEG 587
           MIVMAPSDED+LVDMVAT A I+DRPVCFRYPRGAI  TD     GIP+EIGKG  LVEG
Sbjct: 419 MIVMAPSDEDQLVDMVATAAHINDRPVCFRYPRGAIAGTDHYTRSGIPVEIGKGLTLVEG 478

Query: 588 KDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEE 647
           KDVALLGYG MVQNCL+A+ LLSKLGI+VTVADARFCKPLD+KL+R+LC+NH FL+TVEE
Sbjct: 479 KDVALLGYGTMVQNCLRAQTLLSKLGIEVTVADARFCKPLDMKLLRQLCENHAFLVTVEE 538

Query: 648 GSIGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATAL 707
           GSIGGFGSHVS FIALDG LD   KWRPIVLPDNYIEHA P +QLALAGLTGHHIAAT L
Sbjct: 539 GSIGGFGSHVSQFIALDGQLDGRTKWRPIVLPDNYIEHALPNEQLALAGLTGHHIAATVL 598

Query: 708 SLLGRTREALLLMC 721
            LLGR+REALLLMC
Sbjct: 599 RLLGRSREALLLMC 612


>gi|15239030|ref|NP_196699.1| 1-deoxy-D-xylulose 5-phosphate synthase 3 [Arabidopsis thaliana]
 gi|8953400|emb|CAB96673.1| 1-D-deoxyxylulose 5-phosphate synthase-like protein [Arabidopsis
           thaliana]
 gi|332004286|gb|AED91669.1| 1-deoxy-D-xylulose 5-phosphate synthase 3 [Arabidopsis thaliana]
          Length = 700

 Score =  998 bits (2579), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 497/717 (69%), Positives = 582/717 (81%), Gaps = 21/717 (2%)

Query: 5   SAKYPLELPLTAHCHGTLDQRKIEFLSSNISRELEISRINLCPSSSSITSSKLVTVSRIC 64
           SA    +  ++A  +G  +    +   S++  +L++S  +L  + SS T  +    +R+C
Sbjct: 3   SASIGYQFGISARFYGNFNLSS-DITVSSLPCKLDVSIKSLFSAPSS-THKEYSNRARVC 60

Query: 65  ALPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIV-SKTEKSLKS 123
           +LP+ D +  +K  TPILD +E PL+LK+L++KELK LA EIR+EL S++  KT+KS+  
Sbjct: 61  SLPNTDGYCDEKFETPILDSIETPLQLKNLSVKELKLLADEIRTELHSVLWKKTQKSMNP 120

Query: 124 SLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSE 183
           S AA+ELT+ALH+VF APVD ILWD  EQTYAHK+LT R S I + R+  GISG TSR E
Sbjct: 121 SFAAIELTLALHYVFRAPVDNILWDAVEQTYAHKVLTRRWSAIPS-RQNSGISGVTSRLE 179

Query: 184 SEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDS 243
           SEYD F  GHGCNS+SAGLG+AVARD+KGKR+ +V VI N T  AGQAYEAMSNAGYLDS
Sbjct: 180 SEYDSFGTGHGCNSISAGLGLAVARDMKGKRDRVVAVIDNVTITAGQAYEAMSNAGYLDS 239

Query: 244 NMIVILNDSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMH 303
           NMIVILNDSRHSLHP +EE  K SI+ALSS +S+IQSSK FR+ RE+AK MTKRIG+GM+
Sbjct: 240 NMIVILNDSRHSLHPNMEEGSKASISALSSIMSKIQSSKVFRKFRELAKAMTKRIGKGMY 299

Query: 304 EWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVH 363
           EWAAKVDEYARGM+GP GSTLFEELGLYYIGPVDGHNIEDL+ VL+EV+SL SMGPVLVH
Sbjct: 300 EWAAKVDEYARGMVGPTGSTLFEELGLYYIGPVDGHNIEDLVCVLREVSSLDSMGPVLVH 359

Query: 364 VVTEENRRAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVV 423
           V+TE NR AE T K+  ++ +                RTY DCF+EALVMEAEKD+DIVV
Sbjct: 360 VITEGNRDAE-TVKNIMVKDR----------------RTYSDCFVEALVMEAEKDRDIVV 402

Query: 424 VHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYD 483
           VHAGMEMD SL  FQE+FP+R+F+VGMAEQHAVTFSAGL+ GGLKPFCIIPSAFLQRAYD
Sbjct: 403 VHAGMEMDPSLLTFQERFPDRFFNVGMAEQHAVTFSAGLSSGGLKPFCIIPSAFLQRAYD 462

Query: 484 QVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMV 543
           QVV+DVD+QR  VRFVITSAGLVGSDGP QCGAFDI FMS LPNMI MAP+DEDELV+MV
Sbjct: 463 QVVHDVDRQRKAVRFVITSAGLVGSDGPVQCGAFDIAFMSSLPNMIAMAPADEDELVNMV 522

Query: 544 ATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCL 603
           AT A + DRPVCFR+PRG+IV  +     G+PIEIG+G+VLVEG+DVALLGYGAMVQNCL
Sbjct: 523 ATAAYVTDRPVCFRFPRGSIVNMNYLVPTGLPIEIGRGRVLVEGQDVALLGYGAMVQNCL 582

Query: 604 KARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIAL 663
            A +LLSKLG++VTVADARFCKPLDIKLVR+LCQNH FLITVEEG +GGFGSHV+ FIAL
Sbjct: 583 HAHSLLSKLGLNVTVADARFCKPLDIKLVRDLCQNHKFLITVEEGCVGGFGSHVAQFIAL 642

Query: 664 DGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLLM 720
           DG LD  +KWRPIVLPD YIE ASP +QLALAGLTGHHIAATALSLLGRTREALLLM
Sbjct: 643 DGQLDGNIKWRPIVLPDGYIEEASPREQLALAGLTGHHIAATALSLLGRTREALLLM 699


>gi|297807177|ref|XP_002871472.1| 1-deoxy-D-xylulose 5-phosphate synthase 3 [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317309|gb|EFH47731.1| 1-deoxy-D-xylulose 5-phosphate synthase 3 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 701

 Score =  994 bits (2569), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 491/685 (71%), Positives = 565/685 (82%), Gaps = 21/685 (3%)

Query: 37  ELEISRINLCPSSSSITSSKLVTVSRICALPDIDDFFWDKEPTPILDLVENPLRLKSLTI 96
           ++ I  +   PSS+    S    V   C+LP+ D++  +K  TPILD +E PL+LK+L++
Sbjct: 36  DVSIKSLFSAPSSTHKECSNRARVC--CSLPNTDEYCDEKFETPILDTIETPLQLKNLSV 93

Query: 97  KELKQLAVEIRSELSSIV-SKTEKSLKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYA 155
           KELK LA EIR+EL S++  KT+KS+  S AA+ELT+ALH+VF APVD ILWD  EQTYA
Sbjct: 94  KELKLLADEIRTELHSVLWKKTQKSMNPSFAAIELTLALHYVFRAPVDNILWDAVEQTYA 153

Query: 156 HKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRE 215
           HK+LT R S I + R+K+G SG TS+ ESEYD F  GHGCNS SAGLG+AVARDIKGKR+
Sbjct: 154 HKVLTRRWSAIPS-RQKNGTSGVTSQLESEYDSFGTGHGCNSTSAGLGLAVARDIKGKRD 212

Query: 216 CIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKIEESPKTSINALSSTL 275
            +V VI N T  AGQAYEAMSNAGYLDSNMIVILNDSRHSLHP +EE  K SI+ALSS +
Sbjct: 213 RVVAVIDNATITAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPNMEEGSKASISALSSIM 272

Query: 276 SRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGP 335
           S+IQSSK FR+ RE+AK MTKRIG+GM+EWAAKVDEYARGM+GP GSTLFEELGLYYIGP
Sbjct: 273 SKIQSSKIFRKFRELAKSMTKRIGKGMYEWAAKVDEYARGMVGPTGSTLFEELGLYYIGP 332

Query: 336 VDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSEAIEKQQEGASDSNSLP 395
           VDGHNIEDL+ VL+EV+SL SMGPVLVHV+TEENR AE T K+  ++ +           
Sbjct: 333 VDGHNIEDLVCVLREVSSLDSMGPVLVHVITEENRDAE-TGKNIMVKDR----------- 380

Query: 396 FGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHA 455
                RTY DCF+EALVMEAEKD+DIVVVHAGMEMD SL  FQE+FP+R+F+VGMAEQHA
Sbjct: 381 -----RTYSDCFVEALVMEAEKDRDIVVVHAGMEMDASLITFQERFPDRFFNVGMAEQHA 435

Query: 456 VTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCG 515
           VTFSAGL+ GGLKPFCIIPSAFLQRAYDQVV+DVD+QR  VRFVITSAGLVGSDGP QCG
Sbjct: 436 VTFSAGLSSGGLKPFCIIPSAFLQRAYDQVVHDVDRQRKAVRFVITSAGLVGSDGPVQCG 495

Query: 516 AFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIP 575
           AFDI FMS LPNMI MAP+DEDELV+MVAT A + DRPVCFR+PRG+IV  +     G+P
Sbjct: 496 AFDIAFMSSLPNMIAMAPADEDELVNMVATAAYVTDRPVCFRFPRGSIVNRNYLVPTGLP 555

Query: 576 IEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVREL 635
           IEIG+G+VLVEG+DVALLGYGAMVQNCL A +LLSKLG++VTVADARFCKPLDIKLVR+L
Sbjct: 556 IEIGRGRVLVEGQDVALLGYGAMVQNCLHAHSLLSKLGLNVTVADARFCKPLDIKLVRDL 615

Query: 636 CQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALA 695
           CQNH  LITVEEG +GGFGSHV+ FIALDG LD  +KWRPIVLPD YIE ASP +QLALA
Sbjct: 616 CQNHKILITVEEGCVGGFGSHVAQFIALDGQLDGNIKWRPIVLPDGYIEEASPREQLALA 675

Query: 696 GLTGHHIAATALSLLGRTREALLLM 720
           GLTGHHIAATALSLLGRTREALLLM
Sbjct: 676 GLTGHHIAATALSLLGRTREALLLM 700


>gi|242094640|ref|XP_002437810.1| hypothetical protein SORBIDRAFT_10g002960 [Sorghum bicolor]
 gi|241916033|gb|EER89177.1| hypothetical protein SORBIDRAFT_10g002960 [Sorghum bicolor]
          Length = 722

 Score =  963 bits (2489), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 462/677 (68%), Positives = 556/677 (82%), Gaps = 6/677 (0%)

Query: 48  SSSSITSSKLVTVSRICALPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIR 107
           ++S  + S+ +T  R+ ALPD+DDFFW+K+PTPILD ++ P+ LK+L+ KELKQLA E+R
Sbjct: 47  TTSPASPSRGLT-QRMAALPDVDDFFWEKDPTPILDTIDAPIHLKNLSSKELKQLADEVR 105

Query: 108 SELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIH 167
           SE++ I+S+  +      + VELT+A+H+VF+AP+DKILWD G+  YAHKILTGRRS  H
Sbjct: 106 SEIAFIMSRKCQPCGPGRSVVELTIAIHYVFNAPMDKILWDAGQHAYAHKILTGRRSQFH 165

Query: 168 TLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTM 227
           T+++K+G+SG+TSR ESEYDPF AGHGCNS+SAGLGMAVARDI G++  IVTVISN TTM
Sbjct: 166 TIKQKNGLSGFTSRFESEYDPFGAGHGCNSLSAGLGMAVARDINGRKNRIVTVISNWTTM 225

Query: 228 AGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQL 287
           AGQ YEAM +AG+LDSNM+VILNDS H+L PK +  PK S+NA SS LS+IQSSK FR+ 
Sbjct: 226 AGQVYEAMGHAGFLDSNMVVILNDSCHTLLPKADGRPKMSVNAFSSALSKIQSSKGFRRF 285

Query: 288 REVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISV 347
           RE AKG+ K  G+GMHE+AAKVDEYARGMIGP G+TLFEELGLYYIGP+DG NI+DLI V
Sbjct: 286 REAAKGLAKWFGKGMHEFAAKVDEYARGMIGPHGATLFEELGLYYIGPIDGRNIDDLICV 345

Query: 348 LQEVASLGSMGPVLVHVVTEENRRAEDTQKSEAIEKQQEGASDSNS--LPF--GNYSRTY 403
           L+EVASL S GPVLVHV+T      +   +SE I   +EG S+S++  L F     SRTY
Sbjct: 346 LKEVASLDSTGPVLVHVITGTESDTDGNIRSE-ITASEEGPSNSSNDLLKFLETGLSRTY 404

Query: 404 DDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLA 463
           +DCF+EAL  EAE DK IVVVH GM MD SL+LFQ +FP+R+FD+G+AEQHAVTFSAGLA
Sbjct: 405 NDCFVEALTAEAENDKRIVVVHGGMGMDRSLRLFQSRFPDRFFDLGIAEQHAVTFSAGLA 464

Query: 464 CGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMS 523
           CGGLKPFCIIPS FLQRAYDQ+V DVD Q++PVRF IT+AGLVGS+GPT  G FDITFMS
Sbjct: 465 CGGLKPFCIIPSTFLQRAYDQIVEDVDMQKIPVRFAITNAGLVGSEGPTNSGPFDITFMS 524

Query: 524 CLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKV 583
           CLPNMIVM+PS+EDEL+DMVAT A I+D+P+CFRYPRGAIV T      G P+EIGKG++
Sbjct: 525 CLPNMIVMSPSNEDELIDMVATAAMIEDKPICFRYPRGAIVGTSGTLTYGNPLEIGKGEI 584

Query: 584 LVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLI 643
           LVEGK++A LGYG +VQ CL AR+LLS  GI  TVA+ARFCKPLDI L+R LCQ H+FLI
Sbjct: 585 LVEGKEIAFLGYGEVVQRCLIARSLLSNFGIQATVANARFCKPLDIDLIRTLCQQHSFLI 644

Query: 644 TVEEGSIGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIA 703
           TVEEG++GGFGSHVS FI+LDGLLD  +KWRPIVLPD YIEHAS  +QL LAGLT HHIA
Sbjct: 645 TVEEGTVGGFGSHVSQFISLDGLLDGRIKWRPIVLPDRYIEHASLAEQLDLAGLTAHHIA 704

Query: 704 ATALSLLGRTREALLLM 720
           ATAL+LLGR R+ALLLM
Sbjct: 705 ATALTLLGRHRDALLLM 721


>gi|374639397|gb|AEZ55687.1| putative 1-deoxy-D-xylulose 5-phosphate synthase precursor [Salvia
           miltiorrhiza]
          Length = 713

 Score =  962 bits (2487), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 471/696 (67%), Positives = 563/696 (80%), Gaps = 8/696 (1%)

Query: 26  KIEFLSSNISRELEISRINLCPSSSSITSSKLVTVSRICALPDIDDFFWDKEPTPILDLV 85
           K+E    N    +E SR+    S +       V  S      + D    ++  TPILD+V
Sbjct: 26  KVELSVVNFPPNVEFSRLGFYRSLTCKEYGGHVHCSS-----NTDGAVNEEALTPILDMV 80

Query: 86  ENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDKI 145
           +NP+ LK+L++KELKQLA +IR+ELS I+SKT KS + SL+ VEL VA+HHVFHAPVDKI
Sbjct: 81  DNPMNLKNLSLKELKQLADDIRTELS-IMSKTNKSFRPSLSVVELAVAIHHVFHAPVDKI 139

Query: 146 LWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMA 205
           LWD+ +QTY HK+LTGRR+ ++   + D +S Y  R+E  YDPF AGHGC+S+S+GLGMA
Sbjct: 140 LWDMEDQTYPHKLLTGRRACLNKSGQVDDLSSYACRNE--YDPFGAGHGCSSISSGLGMA 197

Query: 206 VARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKIEESPK 265
           VARDIKGKR+ IV+VISN TTMAGQ YEAMSNAGYLDSNM+VILND  HS +PK++++PK
Sbjct: 198 VARDIKGKRDRIVSVISNETTMAGQVYEAMSNAGYLDSNMVVILNDRHHSSNPKLDQAPK 257

Query: 266 TSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQGSTLF 325
            SINA+SSTLS++QSS+ FR+ REVAK +TKRIGRGMHEWAAK+DEYARGM+GP GSTLF
Sbjct: 258 ASINAVSSTLSKLQSSQFFRKFREVAKVLTKRIGRGMHEWAAKIDEYARGMVGPPGSTLF 317

Query: 326 EELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSEAIEKQQ 385
           EELGLYYIGPVDGHNIEDL+ VL EVASL SMGPVLVHVVT+E    ED Q  +  E+  
Sbjct: 318 EELGLYYIGPVDGHNIEDLLCVLHEVASLDSMGPVLVHVVTKEEYAVEDNQMGKVSEECV 377

Query: 386 EGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERY 445
           EG     + P  +  +TY D F +AL+ EAE D+DIVVVHAGM M+ S +  ++K  +R+
Sbjct: 378 EGPFTIEAAPIRSRPQTYSDHFAKALITEAEIDEDIVVVHAGMGMETSFRALKDKLRDRF 437

Query: 446 FDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGL 505
           FDVGMAEQHAVTFSAGLACGGLKPFCIIP++FLQRAYDQVV+DVD+Q++PVRFV+TSAGL
Sbjct: 438 FDVGMAEQHAVTFSAGLACGGLKPFCIIPASFLQRAYDQVVHDVDRQKIPVRFVLTSAGL 497

Query: 506 VGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYPRGAIVR 565
           VGSDG T  GAFDITFMSCLPNMIVMAPSDE EL  MV+T A I+DRPVCFRYPRGAI  
Sbjct: 498 VGSDGATHSGAFDITFMSCLPNMIVMAPSDEIELARMVSTAADIEDRPVCFRYPRGAIAS 557

Query: 566 TDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCK 625
            D   +   PIE+G+G++LVEGKD+ALLG+G+MVQNCL+A A+LS +GIDVTVADARFCK
Sbjct: 558 MDPNLHLREPIEVGRGRLLVEGKDIALLGFGSMVQNCLRAHAILSNMGIDVTVADARFCK 617

Query: 626 PLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEH 685
           PLDIKLVR LC+NH FLITVEEGSIGGFG+HV+ FI+LDGLLD+G+KWRPI LPDNYIE 
Sbjct: 618 PLDIKLVRMLCKNHKFLITVEEGSIGGFGAHVAQFISLDGLLDAGIKWRPITLPDNYIEG 677

Query: 686 ASPTQQLALAGLTGHHIAATALSLLGRTREALLLMC 721
           A P  QLA AGLTG+HIAATAL+LLGRTR+ALLLMC
Sbjct: 678 AQPNDQLAAAGLTGNHIAATALNLLGRTRDALLLMC 713


>gi|307000604|gb|ADN22972.1| 1-deoxy-D-xylulose 5-phosphate synthase [Zea mays]
          Length = 722

 Score =  954 bits (2466), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 457/665 (68%), Positives = 543/665 (81%), Gaps = 5/665 (0%)

Query: 60  VSRICALPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEK 119
           + R+ ALPD+DDFFW+K+PTPILD ++ P+ LK+L+ KELKQLA E+RSE++ I+S+  +
Sbjct: 58  IQRVAALPDVDDFFWEKDPTPILDTIDAPIHLKNLSSKELKQLADEVRSEIAFIMSRKCQ 117

Query: 120 SLKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYT 179
              +  + VELT+A+H+VF+AP+DKILWD G+  YAHKILTGRRSL HT+ +K+G+SG+T
Sbjct: 118 PCGADRSVVELTIAIHYVFNAPMDKILWDAGQHAYAHKILTGRRSLFHTITQKNGLSGFT 177

Query: 180 SRSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAG 239
           SR ESEYDPF AGHGCNS+SAGLGMAV RDI G++  IVTVISN TTMAGQ YEAM +AG
Sbjct: 178 SRFESEYDPFGAGHGCNSLSAGLGMAVCRDINGRKNRIVTVISNWTTMAGQVYEAMGHAG 237

Query: 240 YLDSNMIVILNDSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIG 299
           +LDSNM+VILNDS H+L PK +   K S+NA SS LS+IQSSK FR+ RE AKG+ K  G
Sbjct: 238 FLDSNMVVILNDSCHTLLPKADGGAKMSVNAFSSALSKIQSSKGFRRFREAAKGLAKWFG 297

Query: 300 RGMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGP 359
           +GMHE+AAKVDEYARGMIGP G+TLFEELGLYYIGP+DG NI+DLI VL+EVASL S GP
Sbjct: 298 KGMHEFAAKVDEYARGMIGPHGATLFEELGLYYIGPIDGRNIDDLICVLKEVASLDSTGP 357

Query: 360 VLVHVVTEENRRAEDTQKSEAIEKQQEGASDSNS--LPF--GNYSRTYDDCFIEALVMEA 415
           VLVHV+T           SE I   +EG S+S+   L F     SRTY+DCF+EAL  EA
Sbjct: 358 VLVHVITGTENDTGGIIGSE-INAVEEGPSNSSPDLLKFLGTGLSRTYNDCFVEALTAEA 416

Query: 416 EKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPS 475
           E DK IVVVH GM +D SL+LFQ +FP+R+FD+G+AEQHAVTFSAGLACGGLKPFCIIPS
Sbjct: 417 ENDKRIVVVHGGMGIDRSLRLFQSRFPDRFFDLGIAEQHAVTFSAGLACGGLKPFCIIPS 476

Query: 476 AFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSD 535
            FLQRAYDQ++ DVD Q++PVRF IT+AGLVGS+GPT  G FDITFMSCLPNMIVM+PS+
Sbjct: 477 TFLQRAYDQIIEDVDMQKIPVRFAITNAGLVGSEGPTNSGPFDITFMSCLPNMIVMSPSN 536

Query: 536 EDELVDMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGY 595
           EDEL+DMVAT A I+DRP+CFRYPRGAIV T      G P EIGKG++LVEGK++A LGY
Sbjct: 537 EDELIDMVATAAMIEDRPICFRYPRGAIVGTSGSVTYGNPFEIGKGEILVEGKEIAFLGY 596

Query: 596 GAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGS 655
           G +VQ CL AR+LLS  GI  TVA+ARFCKPLDI L+R LCQ H+FLITVEEG++GGFGS
Sbjct: 597 GEVVQRCLIARSLLSNFGIQATVANARFCKPLDIDLIRTLCQQHSFLITVEEGTVGGFGS 656

Query: 656 HVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTRE 715
           HVS FI+LDGLLD   KWRPIVLPD YIEHAS  +QL LAGLT HHIAATAL+LLGR R+
Sbjct: 657 HVSQFISLDGLLDGRTKWRPIVLPDRYIEHASLAEQLDLAGLTAHHIAATALTLLGRHRD 716

Query: 716 ALLLM 720
           ALLLM
Sbjct: 717 ALLLM 721


>gi|218197541|gb|EEC79968.1| hypothetical protein OsI_21592 [Oryza sativa Indica Group]
          Length = 611

 Score =  887 bits (2291), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 420/611 (68%), Positives = 505/611 (82%), Gaps = 5/611 (0%)

Query: 114 VSKTEKSLKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKD 173
           +S+  +   +  + VEL +A+H+VF+AP+DKILWD G+ TYAHKILTGRRSL HT++++ 
Sbjct: 1   MSRKCQPCNTGHSVVELAIAIHYVFNAPMDKILWDAGQHTYAHKILTGRRSLFHTIKQRK 60

Query: 174 GISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYE 233
           G+SG+TSR ESEYDPF AGHGCNS+SAGLGMAVARD+ G++  IVTVISN TTMAGQ YE
Sbjct: 61  GLSGFTSRFESEYDPFGAGHGCNSLSAGLGMAVARDLGGRKNRIVTVISNWTTMAGQVYE 120

Query: 234 AMSNAGYLDSNMIVILNDSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKG 293
           AM +AG+LDSNM+VILNDSRH+L PK +   K SINALSS LS++QSSK FR+ RE AKG
Sbjct: 121 AMGHAGFLDSNMVVILNDSRHTLLPKADSQSKMSINALSSALSKVQSSKGFRKFREAAKG 180

Query: 294 MTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVAS 353
           ++K  G+GMHE+AAK+DEYARGMIGP G+TLFEELGLYYIGP+DG+NI+DLI VL+EV++
Sbjct: 181 LSKWFGKGMHEFAAKIDEYARGMIGPHGATLFEELGLYYIGPIDGNNIDDLICVLKEVST 240

Query: 354 LGSMGPVLVHVVTEENRRAEDTQKSEAIEKQQEGASDSNS--LPF--GNYSRTYDDCFIE 409
           L S GPVLVHV+TE  + +     SE I   +EG  DS+   L F     SRTY+DCF+E
Sbjct: 241 LDSTGPVLVHVITENEKDSGGEFNSE-ITPDEEGPPDSSQDILKFLENGLSRTYNDCFVE 299

Query: 410 ALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKP 469
           +L+ EAE DK IVVVH GM +D S+QLFQ +FP+R+FD+G+AEQHAVTFSAGLACGGLKP
Sbjct: 300 SLIAEAENDKRIVVVHGGMGIDRSIQLFQSRFPDRFFDLGIAEQHAVTFSAGLACGGLKP 359

Query: 470 FCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMI 529
           FCIIPS FLQRAYDQ+V DVD Q++PVRF ITSAGLVGS+GPT  G FDITFMSCLPNMI
Sbjct: 360 FCIIPSTFLQRAYDQIVEDVDMQKIPVRFAITSAGLVGSEGPTNSGPFDITFMSCLPNMI 419

Query: 530 VMAPSDEDELVDMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKD 589
           VM+PS+EDEL+DMVAT A ++DRP+CFRYP+GAIV T      G P+EIGKG++L EGK+
Sbjct: 420 VMSPSNEDELIDMVATAAMVEDRPICFRYPKGAIVGTSGTLAYGNPLEIGKGEILAEGKE 479

Query: 590 VALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS 649
           +A LGYG +VQ CL AR+LL   GI  TVA+ARFCKPLDI L+R LCQ H FLITVEEG+
Sbjct: 480 IAFLGYGEVVQRCLIARSLLFNFGIQATVANARFCKPLDIDLIRMLCQQHDFLITVEEGT 539

Query: 650 IGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSL 709
           +GGFGSHVS FI+LDGLLD  +KWRPIVLPD YIEHAS T+QL +AGLT HHIAATAL+L
Sbjct: 540 VGGFGSHVSQFISLDGLLDGKIKWRPIVLPDRYIEHASLTEQLDMAGLTAHHIAATALTL 599

Query: 710 LGRTREALLLM 720
           LGR R+ALLLM
Sbjct: 600 LGRHRDALLLM 610


>gi|413953253|gb|AFW85902.1| hypothetical protein ZEAMMB73_111194 [Zea mays]
          Length = 611

 Score =  880 bits (2275), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 424/599 (70%), Positives = 493/599 (82%), Gaps = 5/599 (0%)

Query: 126 AAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESE 185
           + VELT+A+H+VF+AP+DKILWD G+  YAHKILTGRRSL HT+ +K+G+SG+TSR ESE
Sbjct: 13  SVVELTIAIHYVFNAPMDKILWDAGQHAYAHKILTGRRSLFHTITQKNGLSGFTSRFESE 72

Query: 186 YDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNM 245
           YDPF AGHGCNS+SAGLGMAVARDI G++  IVTVISN TTMAGQ YEAM +AG+LDSNM
Sbjct: 73  YDPFGAGHGCNSLSAGLGMAVARDINGRKNRIVTVISNWTTMAGQVYEAMGHAGFLDSNM 132

Query: 246 IVILNDSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEW 305
           +VILNDS H+L PK +   K S+NA SS LS+IQSSK FR+ RE AKG+ K  G+GMHE+
Sbjct: 133 VVILNDSCHTLLPKADGGAKMSVNAFSSALSKIQSSKGFRRFREAAKGLAKWFGKGMHEF 192

Query: 306 AAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVV 365
           AAKVDEYARGMIGP G+TLFEELGLYYIGP+DG NI+DLI VL+EVASL S GPVLVHV+
Sbjct: 193 AAKVDEYARGMIGPHGATLFEELGLYYIGPIDGRNIDDLICVLKEVASLDSTGPVLVHVI 252

Query: 366 TEENRRAEDTQKSEAIEKQQEGASDSNS--LPF--GNYSRTYDDCFIEALVMEAEKDKDI 421
           T           SE I   +EG S+S+   L F     SRTY+DCF+EAL  EAE DK I
Sbjct: 253 TGTENDTGGIIGSE-INAVEEGPSNSSPDLLKFLGTGLSRTYNDCFVEALTAEAENDKRI 311

Query: 422 VVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRA 481
           VVVH GM +D SL+LFQ +FP+R+FD+G+AEQHAVTFSAGLACGGLKPFCIIPS FLQRA
Sbjct: 312 VVVHGGMGIDRSLRLFQSRFPDRFFDLGIAEQHAVTFSAGLACGGLKPFCIIPSTFLQRA 371

Query: 482 YDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVD 541
           YDQ++ DVD Q++PVRF IT+AGLVGS+GPT  G FDITFMSCLPNMIVM+PS+EDEL+D
Sbjct: 372 YDQIIEDVDMQKIPVRFAITNAGLVGSEGPTNSGPFDITFMSCLPNMIVMSPSNEDELID 431

Query: 542 MVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQN 601
           MVAT A I+DRP+CFRYPRGAIV T      G P EIGKG++LVEGK++A LGYG +VQ 
Sbjct: 432 MVATAAMIEDRPICFRYPRGAIVGTSGSVTYGNPFEIGKGEILVEGKEIAFLGYGEVVQR 491

Query: 602 CLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFI 661
           CL AR+LLS  GI  TVA+ARFCKPLDI L+R LCQ H+FLITVEEG++GGFGSHVS FI
Sbjct: 492 CLIARSLLSNFGIQATVANARFCKPLDIDLIRTLCQQHSFLITVEEGTVGGFGSHVSQFI 551

Query: 662 ALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLLM 720
           +LDGLLD   KWRPIVLPD YIEHAS  +QL LAGLT HHIAATAL+LLGR R+ALLLM
Sbjct: 552 SLDGLLDGRTKWRPIVLPDRYIEHASLAEQLDLAGLTAHHIAATALTLLGRHRDALLLM 610


>gi|302815172|ref|XP_002989268.1| hypothetical protein SELMODRAFT_427859 [Selaginella moellendorffii]
 gi|300143011|gb|EFJ09706.1| hypothetical protein SELMODRAFT_427859 [Selaginella moellendorffii]
          Length = 728

 Score =  852 bits (2201), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 420/673 (62%), Positives = 510/673 (75%), Gaps = 22/673 (3%)

Query: 60  VSRICALPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEK 119
           V R  AL +  ++F +K PTP+LD +  PL +K+L + +L+QLA E+R+E    VSKT  
Sbjct: 62  VVRASALSEAPEYFSEKPPTPLLDTINYPLHMKNLGVSDLEQLAEELRNETIFSVSKTGG 121

Query: 120 SLKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYT 179
            L SSL  VELTVALHHVF+ P DKILWDVG QTY HKILTGRRS +HTLR+ DGI G+T
Sbjct: 122 HLGSSLGVVELTVALHHVFNTPEDKILWDVGHQTYPHKILTGRRSRMHTLRQTDGICGFT 181

Query: 180 SRSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAG 239
            RSESEYDPF AGH   ++SAGLGMAVARD++GK+  ++ VI +G   AGQAYEAM+NAG
Sbjct: 182 KRSESEYDPFGAGHSSTTISAGLGMAVARDLQGKKNNVIAVIGDGAMTAGQAYEAMNNAG 241

Query: 240 YLDSNMIVILNDSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRI 298
           YLD+N+IVILND++  SL     + P   + ALSS LSR+QSSK  R+LREVAKG+TK+I
Sbjct: 242 YLDTNLIVILNDNKQVSLPTATLDGPAPPVGALSSALSRLQSSKKLRELREVAKGVTKQI 301

Query: 299 GRGMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMG 358
           G  MH+ AAKVDEYARGMI   G+T FEELGLYYIGPVDGH I+DLI++L+EV +  ++G
Sbjct: 302 GGHMHQLAAKVDEYARGMISGTGATFFEELGLYYIGPVDGHRIDDLIAILKEVKAAETIG 361

Query: 359 PVLVHVVTEENR------RAED-----TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCF 407
           PVL+HVVTE+ R      RA D      +   A  KQQ+G            ++ Y   F
Sbjct: 362 PVLIHVVTEKGRGYPYAERAADKYHGVVKFDPATGKQQKGKP---------ATKAYTTYF 412

Query: 408 IEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGL 467
            E+LV EA+KD+ IV +HA M     L +FQ++FPER FDVG+AEQHAVTF+AGLA  G+
Sbjct: 413 AESLVAEAQKDESIVAIHAAMGGGTGLNIFQKQFPERCFDVGIAEQHAVTFAAGLASEGI 472

Query: 468 KPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPN 527
           KPFC I S+FLQR YDQVV+DVD Q+LPVRF +  AGLVG+DGPT CGAFD+T+M+CLPN
Sbjct: 473 KPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTYMACLPN 532

Query: 528 MIVMAPSDEDELVDMVATVASIDDRPVCFRYPRGAIVRTDLP-GYRGIPIEIGKGKVLVE 586
           M+VMAP+DE EL+ M+AT A+IDDRP CFRYPRG  +   LP G +G P+EIGKG++LVE
Sbjct: 533 MVVMAPADEAELMHMIATAAAIDDRPSCFRYPRGNGIGALLPAGNKGTPVEIGKGRILVE 592

Query: 587 GKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVE 646
           G  VALLGYG MVQNCL AR LL + G+ VTVADARFCKPLD +LVR+L + H  LITVE
Sbjct: 593 GSRVALLGYGTMVQNCLGARNLLQEHGLSVTVADARFCKPLDQQLVRQLAKEHEVLITVE 652

Query: 647 EGSIGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATA 706
           EGSIGGFGSHV HF+ALDGLLD  +KWRPIVLPD YI+H SP  Q+A AGLT  HIAATA
Sbjct: 653 EGSIGGFGSHVVHFLALDGLLDGKLKWRPIVLPDRYIDHGSPQDQMAEAGLTSSHIAATA 712

Query: 707 LSLLGRTREALLL 719
           LS+LG+TREAL L
Sbjct: 713 LSMLGKTREALHL 725


>gi|168007322|ref|XP_001756357.1| 1-deoxyxylulose 5-phosphate synthase [Physcomitrella patens subsp.
           patens]
 gi|162692396|gb|EDQ78753.1| 1-deoxyxylulose 5-phosphate synthase [Physcomitrella patens subsp.
           patens]
          Length = 729

 Score =  835 bits (2156), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 412/690 (59%), Positives = 507/690 (73%), Gaps = 15/690 (2%)

Query: 42  RINLCPSSSSITSSKLVTVSRICA--LPDID-DFFWDKEPTPILDLVENPLRLKSLTIKE 98
           ++NL     S    +    SRI A  +PD   ++  +K PTP+LD +  P+ +K+LT++E
Sbjct: 43  KLNLSKGYHSSLRLRSNGKSRIAASAVPDSSAEYPAEKPPTPLLDTINYPMHMKNLTVRE 102

Query: 99  LKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKI 158
           LKQLA E+R+E    VSKT   L SSL  VELTVALHHVF+ P DK LWDVG QTY HKI
Sbjct: 103 LKQLANEVRAETIHTVSKTGGHLGSSLGVVELTVALHHVFNCPEDKFLWDVGHQTYPHKI 162

Query: 159 LTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIV 218
           LTGRR  +HTLR+ DG+SG+  R+ESEYD F AGH   S+SAGLGMAV RD+KGK+  ++
Sbjct: 163 LTGRRGKMHTLRQTDGLSGFVKRAESEYDAFGAGHSSTSISAGLGMAVGRDLKGKKNNVI 222

Query: 219 TVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH-SLHPKIEESPKTSINALSSTLSR 277
            VI +G   AGQAYEAM+NAGYLD NMIVILND++  SL     + P   + ALSS LSR
Sbjct: 223 AVIGDGAMTAGQAYEAMNNAGYLDCNMIVILNDNKQVSLPTATLDGPAPPVGALSSALSR 282

Query: 278 IQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVD 337
           +QSS+  R+LREVAKG+TK++G   H  A+KVDEYARGMI   GSTLFEELGLYYIGPVD
Sbjct: 283 LQSSRPLRELREVAKGVTKQLGGPAHVLASKVDEYARGMISGSGSTLFEELGLYYIGPVD 342

Query: 338 GHNIEDLISVLQEVASLGSMGPVLVHVVTEENR------RAEDTQKSEAIEKQQEGASDS 391
           GHN++DL+++L+EV +  + GPVL+H+VTE+ R      RA D            G  + 
Sbjct: 343 GHNMDDLVTILREVKNTSTTGPVLIHLVTEKGRGYPYAERAADKYHGVVKFDPATGKQNK 402

Query: 392 NSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMA 451
              P    ++ Y   F EAL+ EAE DKD+V +HA M     + +F ++FPER FDVG+A
Sbjct: 403 VKAP----TQAYTTYFAEALIAEAEVDKDVVGIHAAMGGGTGMNIFAKRFPERCFDVGIA 458

Query: 452 EQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGP 511
           EQHAVTF+AGLAC GLKPFC I S+FLQR YDQVV+DVD Q+LPVRF +  AGLVG+DGP
Sbjct: 459 EQHAVTFAAGLACEGLKPFCSIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGP 518

Query: 512 TQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYPRGAIVRTDLPGY 571
           T CGAFD+T+M+CLPNM+VMAP+DE EL  MVAT A+IDDRP CFRYPRG  +   LP  
Sbjct: 519 THCGAFDVTYMACLPNMVVMAPADEAELFHMVATAAAIDDRPSCFRYPRGNGIGVQLPAK 578

Query: 572 -RGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIK 630
            +GIPIE+G+G++L+EG +VALLGYG MVQNCL A  LL+ LG+  TVADARFCKPLD  
Sbjct: 579 NKGIPIEVGRGRILLEGTEVALLGYGTMVQNCLAAHVLLADLGVSATVADARFCKPLDRD 638

Query: 631 LVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQ 690
           L+R+L +NH  LITVEEGSIGGFGSHV  F+ALDGLLD  +KWRP+VLPD YIEH +P  
Sbjct: 639 LIRQLAKNHQVLITVEEGSIGGFGSHVVQFMALDGLLDGKLKWRPLVLPDRYIEHGAPKD 698

Query: 691 QLALAGLTGHHIAATALSLLGRTREALLLM 720
           Q A AGLT  HIAATAL++LG+TREAL +M
Sbjct: 699 QYAEAGLTAGHIAATALNVLGKTREALQVM 728


>gi|449454454|ref|XP_004144970.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic-like [Cucumis sativus]
 gi|449473276|ref|XP_004153837.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic-like [Cucumis sativus]
 gi|449507648|ref|XP_004163093.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic-like [Cucumis sativus]
          Length = 718

 Score =  830 bits (2144), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 407/672 (60%), Positives = 509/672 (75%), Gaps = 23/672 (3%)

Query: 63  ICA-LPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSL 121
           ICA L +  ++   + PTP+LD +  P+ +K+L++KEL QLA E+RS++   VSKT   L
Sbjct: 55  ICASLSETGEYPSQRPPTPLLDTINYPIHMKNLSVKELYQLADEVRSDVIFNVSKTGGHL 114

Query: 122 KSSLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSR 181
            SSL  VELTVALH+VF+AP D+ILWDVG Q+Y HKILTGRR  + T+R+ +G+SG+T R
Sbjct: 115 GSSLGVVELTVALHYVFNAPQDRILWDVGHQSYPHKILTGRRDKMSTIRQTNGLSGFTKR 174

Query: 182 SESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL 241
           SESE+D F AGH   ++SAGLGMAV RD+KG++  ++ VI +G   AGQAYEAM+NAGYL
Sbjct: 175 SESEFDSFGAGHSSTTISAGLGMAVGRDLKGRKNNVIAVIGDGAMTAGQAYEAMNNAGYL 234

Query: 242 DSNMIVILNDSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGR 300
           DS+MIVILND++  SL     + P   + ALSS LSR+QS++  R+LREVAKG+TK+IG 
Sbjct: 235 DSDMIVILNDNKQVSLPTATLDGPVPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGG 294

Query: 301 GMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPV 360
            MHE AAKVDEYARGMI   GSTLFEELGLYYIGPVDGHN++DL+S+L+EV S  + GPV
Sbjct: 295 PMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVSILKEVKSTKTTGPV 354

Query: 361 LVHVVTEENR------RAED-----TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIE 409
           L+HVVTE+ R      +A D     T+   A  KQQ+  + + S         Y   F E
Sbjct: 355 LIHVVTEKGRGYPYAEKAADKYHGVTKFDPATGKQQKAKAPTQS---------YTTYFAE 405

Query: 410 ALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKP 469
           AL+ EAE+DKDI+ +HA M     L LFQ +FP R FDVG+AEQHAVTF+AGLAC GLKP
Sbjct: 406 ALIAEAERDKDIIAIHAAMGGGTGLNLFQRRFPTRCFDVGIAEQHAVTFAAGLACEGLKP 465

Query: 470 FCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMI 529
           FC I S+F+QRAYDQVV+DVD Q+LPVRF +  AGLVG+DGPT CG+FD+TFM+CLPNM+
Sbjct: 466 FCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMV 525

Query: 530 VMAPSDEDELVDMVATVASIDDRPVCFRYPRGAIVRTDL-PGYRGIPIEIGKGKVLVEGK 588
           VMAPSDE EL +MVAT A+IDDRP CFRYPRG  +  +L PG +GIPIE+GKG++L+EG+
Sbjct: 526 VMAPSDETELFNMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPIEVGKGRILLEGE 585

Query: 589 DVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEG 648
            VALLGYG  VQNCL A +++ + G+ +TVAD RFCKPLD  L+R L ++H  LITVEEG
Sbjct: 586 RVALLGYGTAVQNCLAAASMVERHGLRITVADGRFCKPLDRALIRSLAKSHEILITVEEG 645

Query: 649 SIGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALS 708
           SIGGFGSHV  F+ALDGLLD  +KWRP+VLPD YI+H SP  QLA AGLT  HIAAT  +
Sbjct: 646 SIGGFGSHVIQFLALDGLLDGSLKWRPLVLPDRYIDHGSPADQLAEAGLTPSHIAATVFN 705

Query: 709 LLGRTREALLLM 720
           +LG+TREAL +M
Sbjct: 706 MLGQTREALEIM 717


>gi|164604984|dbj|BAF98288.1| 1-deoxy-D-xylulose 5-phosphate synthase [Hevea brasiliensis]
          Length = 720

 Score =  828 bits (2140), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 413/672 (61%), Positives = 508/672 (75%), Gaps = 23/672 (3%)

Query: 63  ICA-LPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSL 121
           ICA L +  ++   + PTP+LD    P+ +K+L+IKELKQLA E+RS++   VS+T   L
Sbjct: 56  ICASLSERGEYHSQRPPTPLLDTTNYPIHMKNLSIKELKQLADELRSDVIFNVSRTGGHL 115

Query: 122 KSSLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSR 181
            SSL  VELTVALH+VF AP DKILWDVG Q+Y HKILTGRR  ++T+R+ +G+SG+T R
Sbjct: 116 GSSLGVVELTVALHYVFSAPRDKILWDVGHQSYPHKILTGRREKMYTIRQTNGLSGFTKR 175

Query: 182 SESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL 241
           SESEYD F  GH   ++SAGLGMAV RD+KGK+  +V VI +G   AGQAYEAM+NAGYL
Sbjct: 176 SESEYDCFGTGHSSTTISAGLGMAVGRDLKGKKNNVVAVIGDGAMTAGQAYEAMNNAGYL 235

Query: 242 DSNMIVILNDSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGR 300
           DS+MIVILND++  SL     + P   + ALSS LSR+QS++  R+LREVAKG+TK+IG 
Sbjct: 236 DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGG 295

Query: 301 GMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPV 360
            MHEWAAKVDEYARGMI   GSTLFEELGLYYIGPVDGHNI+DLI++L+EV S  + GPV
Sbjct: 296 PMHEWAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDLIAILKEVKSTKTTGPV 355

Query: 361 LVHVVTEENR------RAED-----TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIE 409
           L+HVVTE+ R      +A D     T+   A  KQ +G++          +++Y   F E
Sbjct: 356 LIHVVTEKGRGYPYAEKAADKYHGVTKFDPATGKQFKGSA---------ITQSYTTYFAE 406

Query: 410 ALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKP 469
           AL+ EAE DKDIV +HA M     L LF  +FP R FDVG+AEQHAVTF+AGLAC GLKP
Sbjct: 407 ALIAEAEVDKDIVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKP 466

Query: 470 FCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMI 529
           FC I S+F+QRAYDQVV+DVD Q+LPVRF +  AGLVG+DGPT CGAFD+TFM+CLPNM+
Sbjct: 467 FCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMACLPNMV 526

Query: 530 VMAPSDEDELVDMVATVASIDDRPVCFRYPRGAIVRTDL-PGYRGIPIEIGKGKVLVEGK 588
           VMAPSDE EL  MVAT A+IDDRP CFRYPRG  V   L PG +GIP+E+GKG++L+EG+
Sbjct: 527 VMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGVGVQLPPGNKGIPLEVGKGRILIEGE 586

Query: 589 DVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEG 648
            VALLGYG  VQ+CL A +L+   G+ +TVADARFCKPLD  L+R L ++H  LITVEEG
Sbjct: 587 RVALLGYGTAVQSCLAAASLVEPHGLLITVADARFCKPLDHTLIRSLAKSHEVLITVEEG 646

Query: 649 SIGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALS 708
           SIGGFGSHV+HF+ALDGLLD  +KWRP+VLPD YI+H SP+ QL  AGLT  H+AAT L+
Sbjct: 647 SIGGFGSHVAHFLALDGLLDGKLKWRPLVLPDRYIDHGSPSVQLIEAGLTPSHVAATVLN 706

Query: 709 LLGRTREALLLM 720
           +LG  REAL +M
Sbjct: 707 ILGNKREALQIM 718


>gi|46410858|gb|AAS94123.1| putative 1-deoxy-D-xylulose 5-phosphate synthase [Hevea
           brasiliensis]
          Length = 720

 Score =  828 bits (2140), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 412/673 (61%), Positives = 508/673 (75%), Gaps = 23/673 (3%)

Query: 62  RICA-LPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKS 120
           R+CA L + +++   + PTP+LD +  P+ +K+L+IKELKQLA E+RS++   VS T   
Sbjct: 55  RVCASLSEREEYHSQRPPTPLLDTINYPIHMKNLSIKELKQLADELRSDVIFNVSGTGGH 114

Query: 121 LKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTS 180
           L SSL  VELTVALH+VF+AP DKILWDVG Q+Y HKILTGRR  +HT+R+ +G+SG+T 
Sbjct: 115 LGSSLGVVELTVALHYVFNAPQDKILWDVGHQSYPHKILTGRRDKMHTIRQTNGLSGFTK 174

Query: 181 RSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGY 240
           RSESEYD F  GH   ++SAGLGMAV RD+KG++  +V VI +G   AGQAYEAM+NAGY
Sbjct: 175 RSESEYDCFGTGHSSTTISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGY 234

Query: 241 LDSNMIVILNDSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIG 299
           LDS+MIVILND++  SL     + P   + ALSS LSR+QS++  R+LREVAKG+TKRIG
Sbjct: 235 LDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKRIG 294

Query: 300 RGMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGP 359
             MHE AAKVDEYARGMI   GSTLFEELGLYYIGPVDGHNI+DLI++L+EV    + GP
Sbjct: 295 GSMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDLIAILKEVKGTKTTGP 354

Query: 360 VLVHVVTEENR------RAED-----TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFI 408
           VL+HVVTE+ R      +A D     T+   A  KQ +G++          +++Y   F 
Sbjct: 355 VLIHVVTEKGRGYPYAEKAADKYHGVTKFDPATGKQFKGSA---------ITQSYTTYFA 405

Query: 409 EALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLK 468
           EAL+ EAE DKDIV +HA M     L LF  +FP R FDVG+AEQHAVTF+AGLAC GLK
Sbjct: 406 EALIAEAEVDKDIVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLK 465

Query: 469 PFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNM 528
           PFC I S+F+QRAYDQVV+DVD Q+LPVRF +  AGLVG+DGPT CGAFD+TFM+CLPNM
Sbjct: 466 PFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMACLPNM 525

Query: 529 IVMAPSDEDELVDMVATVASIDDRPVCFRYPRGAIVRTDL-PGYRGIPIEIGKGKVLVEG 587
           +VMAPSDE EL  MVAT A+IDDRP CFRYPRG  V   L PG +GIP+E+GKG++L+EG
Sbjct: 526 VVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGVGVQLPPGNKGIPLEVGKGRILIEG 585

Query: 588 KDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEE 647
           + VALLGYG  VQ+CL A +L+   G+ +TVADARFCKPLD  L+R L + H  LITVEE
Sbjct: 586 ERVALLGYGTAVQSCLAAASLVEPHGLLITVADARFCKPLDHTLIRSLAKPHEVLITVEE 645

Query: 648 GSIGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATAL 707
           GSIGGFGSHV+HF+ALDGLLD  +KWRP+VLPD YI+H SP+ QL  AGLT  H+AAT L
Sbjct: 646 GSIGGFGSHVAHFLALDGLLDGKLKWRPLVLPDRYIDHGSPSVQLIEAGLTPSHVAATVL 705

Query: 708 SLLGRTREALLLM 720
           ++LG  REAL +M
Sbjct: 706 NILGNKREALQIM 718


>gi|168002605|ref|XP_001754004.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162694980|gb|EDQ81326.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 725

 Score =  828 bits (2138), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 404/658 (61%), Positives = 495/658 (75%), Gaps = 12/658 (1%)

Query: 71  DFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVEL 130
           ++  +K PTP+LD V  P+ +K+LT +ELKQLA E+R+E    VSKT   L SSL  VEL
Sbjct: 71  EYPSEKPPTPLLDTVNYPVHMKNLTKRELKQLADELRAETIHTVSKTGGHLGSSLGVVEL 130

Query: 131 TVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFN 190
           TVALH+VF+AP DKILWDVG QTY HKILTGRR  + TLR+ DG+SG+  R+ESEYDPF 
Sbjct: 131 TVALHYVFNAPDDKILWDVGHQTYPHKILTGRRGKMQTLRQTDGLSGFVKRAESEYDPFG 190

Query: 191 AGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
           AGH   S+SAGLGMAV RD+KGK+  +++VI +G   AGQAYEAM+NAGYLD NMIVILN
Sbjct: 191 AGHSSTSISAGLGMAVGRDLKGKKNNVISVIGDGAMTAGQAYEAMNNAGYLDCNMIVILN 250

Query: 251 DSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKV 309
           D++  SL     + P   + ALSS LSR+QSS+  R+LREVAKG+TK+ G   H  A+KV
Sbjct: 251 DNKQVSLPTATLDGPAPPVGALSSALSRLQSSRPLRELREVAKGVTKQFGGSAHILASKV 310

Query: 310 DEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN 369
           DEYARGMI   GSTLFEELGLYYIGPVDGHN++DL+++L+EV +  + GPVL+H+VTE+ 
Sbjct: 311 DEYARGMISGSGSTLFEELGLYYIGPVDGHNLDDLVTILREVKNTSTTGPVLIHLVTEKG 370

Query: 370 R------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVV 423
           R      RA D  K   + K          +     ++ Y   F EAL+ EAE DK I+ 
Sbjct: 371 RGYPYAERAAD--KYHGVVKFDPATGKQKKVK--TATQAYTTYFAEALIAEAELDKSIIG 426

Query: 424 VHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYD 483
           +HA M     + +F ++FPER FDVG+AEQHAVTF+AGLAC GLKPFC I S+FLQR YD
Sbjct: 427 IHAAMGGGTGMNMFAKRFPERCFDVGIAEQHAVTFAAGLACEGLKPFCSIYSSFLQRGYD 486

Query: 484 QVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMV 543
           QVV+DVD Q+LPVRF +  AGLVG+DGPT CGAFD+T+M+CLPNM+VMAPSDE EL +MV
Sbjct: 487 QVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTYMACLPNMVVMAPSDEAELFNMV 546

Query: 544 ATVASIDDRPVCFRYPRGAIVRTDLPG-YRGIPIEIGKGKVLVEGKDVALLGYGAMVQNC 602
           AT  +I+DRP CFRYPRG  +  +LP   +G PIE+GKG++L+EG  VALLGYG MVQNC
Sbjct: 547 ATAVTIEDRPSCFRYPRGNGIGVELPANNKGAPIEVGKGRILLEGTQVALLGYGTMVQNC 606

Query: 603 LKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIA 662
           L A +LL+KLGI  TVAD RFCKPLD  L+R+L +NH  LITVEEGSIGGFGSHV+ F+A
Sbjct: 607 LAAHSLLAKLGISATVADGRFCKPLDRDLIRQLAKNHQVLITVEEGSIGGFGSHVAQFMA 666

Query: 663 LDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLLM 720
           LDGLLD  ++WRP+VLPD YIEH SP  Q A AGLT  HIAAT L++LG+TREAL LM
Sbjct: 667 LDGLLDGKLQWRPLVLPDRYIEHGSPKDQYAEAGLTAGHIAATVLNVLGKTREALELM 724


>gi|222634935|gb|EEE65067.1| hypothetical protein OsJ_20090 [Oryza sativa Japonica Group]
          Length = 638

 Score =  827 bits (2136), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/572 (68%), Positives = 471/572 (82%), Gaps = 5/572 (0%)

Query: 114 VSKTEKSLKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKD 173
           +S+  +   +  + VEL +A+H+VF+AP+DKILWD G+ TYAHKILTGRRSL HT++++ 
Sbjct: 1   MSRKCQPCNTGHSVVELAIAIHYVFNAPMDKILWDAGQHTYAHKILTGRRSLFHTIKQRK 60

Query: 174 GISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYE 233
           G+SG+TSR ESEYDPF AGHGCNS+SAGLGMAVARD+ G++  IVTVISN TTMAGQ YE
Sbjct: 61  GLSGFTSRFESEYDPFGAGHGCNSLSAGLGMAVARDLGGRKNRIVTVISNWTTMAGQVYE 120

Query: 234 AMSNAGYLDSNMIVILNDSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKG 293
           AM +AG+LDSNM+VILNDSRH+L PK +   K SINALSS LS++QSSK FR+ RE AKG
Sbjct: 121 AMGHAGFLDSNMVVILNDSRHTLLPKADSQSKMSINALSSALSKVQSSKGFRKFREAAKG 180

Query: 294 MTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVAS 353
           ++K  G+GMHE+AAK+DEYARGMIGP G+TLFEELGLYYIGP+DG+NI+DLI VL+EV++
Sbjct: 181 LSKWFGKGMHEFAAKIDEYARGMIGPHGATLFEELGLYYIGPIDGNNIDDLICVLKEVST 240

Query: 354 LGSMGPVLVHVVTEENRRAEDTQKSEAIEKQQEGASDSNS--LPF--GNYSRTYDDCFIE 409
           L S GPVLVHV+TE  + +     SE I   +EG  DS+   L F     SRTY+DCF+E
Sbjct: 241 LDSTGPVLVHVITENEKDSGGEFNSE-ITPDEEGPPDSSQDILKFLENGLSRTYNDCFVE 299

Query: 410 ALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKP 469
           +L+ EAE DK IVVVH GM +D S+QLFQ +FP+R+FD+G+AEQHAVTFSAGLACGGLKP
Sbjct: 300 SLIAEAENDKHIVVVHGGMGIDRSIQLFQSRFPDRFFDLGIAEQHAVTFSAGLACGGLKP 359

Query: 470 FCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMI 529
           FCIIPS FLQRAYDQ+V DVD Q++PVRF ITSAGLVGS+GPT  G FDITFMSCLPNMI
Sbjct: 360 FCIIPSTFLQRAYDQIVEDVDMQKIPVRFAITSAGLVGSEGPTNSGPFDITFMSCLPNMI 419

Query: 530 VMAPSDEDELVDMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKD 589
           VM+PS+EDEL+DMVAT A ++DRP+CFRYP+GAIV T      G P+EIGKG++L EGK+
Sbjct: 420 VMSPSNEDELIDMVATAAMVEDRPICFRYPKGAIVGTSGTLAYGNPLEIGKGEILAEGKE 479

Query: 590 VALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS 649
           +A LGYG +VQ CL AR+LL   GI  TVA+ARFCKPLDI L+R LCQ H FLITVEEG+
Sbjct: 480 IAFLGYGDVVQRCLIARSLLFNFGIQATVANARFCKPLDIDLIRMLCQQHDFLITVEEGT 539

Query: 650 IGGFGSHVSHFIALDGLLDSGVKWRPIVLPDN 681
           +GGFGSHVS FI+LDGLLD  +KWRPIVLPD+
Sbjct: 540 VGGFGSHVSQFISLDGLLDGKIKWRPIVLPDS 571


>gi|225432422|ref|XP_002277919.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic [Vitis vinifera]
 gi|297736933|emb|CBI26134.3| unnamed protein product [Vitis vinifera]
          Length = 716

 Score =  826 bits (2134), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 404/667 (60%), Positives = 505/667 (75%), Gaps = 13/667 (1%)

Query: 63  ICA-LPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSL 121
           +CA L D +++   + PTP+LD +  P+ +K+L++KELKQLA E+RS++   VSKT   L
Sbjct: 53  VCASLSDREEYHSQRPPTPLLDTINYPIHMKNLSVKELKQLADELRSDVVFNVSKTGGHL 112

Query: 122 KSSLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSR 181
            SSL  VELTVALH+VF+AP D+ILWDVG Q+Y HKILTGRR  +HT+R+ DG++G+T R
Sbjct: 113 GSSLGVVELTVALHYVFNAPQDRILWDVGHQSYPHKILTGRRDQMHTMRQTDGLAGFTKR 172

Query: 182 SESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL 241
           SESEYD F  GH   ++SAGLGMAV RD+KGK   ++ VI +G   AGQAYEAM+NAGYL
Sbjct: 173 SESEYDCFGTGHSSTTISAGLGMAVGRDLKGKNNNVIAVIGDGAMTAGQAYEAMNNAGYL 232

Query: 242 DSNMIVILNDSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGR 300
           DS+MIVILND++  SL     + P   + ALSS LSR+QS++  R+LREVAKG+TK+IG 
Sbjct: 233 DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGG 292

Query: 301 GMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPV 360
            MHE AAKVDEYARGMI   GSTLFEELGLYYIGPVDGHNI+DL+++L+EV S  + GPV
Sbjct: 293 PMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDLVAILKEVKSTKTTGPV 352

Query: 361 LVHVVTEENR------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVME 414
           L+HVVTE+ R      +A D            G    +S P    +++Y   F EAL+ E
Sbjct: 353 LIHVVTEKGRGYPYAEKAADKYHGVTKFDPATGKQFKSSAP----TQSYTTYFAEALIAE 408

Query: 415 AEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIP 474
           AE DKDIV +HA M     L LF  +FP R FDVG+AEQHAVTF+AGLAC G+KPFC I 
Sbjct: 409 AEVDKDIVAIHAAMGGGTGLNLFHRRFPTRCFDVGIAEQHAVTFAAGLACEGIKPFCAIY 468

Query: 475 SAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPS 534
           S+F+QRAYDQVV+DVD Q+LPV+F +  AGLVG+DGPT CGAFD+TFM+CLPNM+VMAP+
Sbjct: 469 SSFMQRAYDQVVHDVDLQKLPVKFAMDRAGLVGADGPTHCGAFDVTFMACLPNMVVMAPA 528

Query: 535 DEDELVDMVATVASIDDRPVCFRYPRGAIVRTDL-PGYRGIPIEIGKGKVLVEGKDVALL 593
           DE EL  MVAT A+IDDRP CFRYPRG  V  +L PG +GIPIE+G+G++L+EG+ VALL
Sbjct: 529 DEAELFHMVATAAAIDDRPSCFRYPRGNGVGVELPPGNKGIPIEVGRGRILIEGERVALL 588

Query: 594 GYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGF 653
           GYG  VQ+CL A +LL + G+ +TVADARFCKPLD  L+R L ++H  LITVEEGSIGGF
Sbjct: 589 GYGTAVQSCLVASSLLEQHGLRITVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGF 648

Query: 654 GSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRT 713
           GSHV+ F+AL+GLLD   KW P+VLPD YI+H +P  QLA+AGLT  HIAAT  ++LG+T
Sbjct: 649 GSHVAQFLALNGLLDGTTKWSPMVLPDRYIDHGAPADQLAMAGLTPSHIAATVFNILGQT 708

Query: 714 REALLLM 720
           REAL +M
Sbjct: 709 REALEIM 715


>gi|21322713|emb|CAD22530.1| 1-deoxy-D-xylulose 5-phosphate synthase 1 [Medicago truncatula]
          Length = 717

 Score =  826 bits (2133), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 401/663 (60%), Positives = 503/663 (75%), Gaps = 8/663 (1%)

Query: 64  CALPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKS 123
            +L ++ +++  + PTP+LD +  P+ +K+L+ KELKQLA E+RS++   VS+T   L S
Sbjct: 56  ASLSEMGEYYSQRPPTPLLDTINYPIHMKNLSTKELKQLADELRSDVIFSVSRTGGHLGS 115

Query: 124 SLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSE 183
           SL  VELT+ALH+VF+ P DKILWDVG Q+Y HKILTGRR  +HT+R+ +G+SG+T RSE
Sbjct: 116 SLGVVELTIALHYVFNTPQDKILWDVGHQSYPHKILTGRRDKMHTMRQTNGLSGFTKRSE 175

Query: 184 SEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDS 243
           SEYD F  GH   ++SAGLGMAV RD+KG++  +V VI +G   AGQAYEAM+NAGYLDS
Sbjct: 176 SEYDSFGTGHSSTTISAGLGMAVGRDLKGRKNDVVAVIGDGAMTAGQAYEAMNNAGYLDS 235

Query: 244 NMIVILNDSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGM 302
           +MIVILND++  SL     + P   + ALSS LSR+QS+K  R+LREVAKG+TKRIG  M
Sbjct: 236 DMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNKPLRELREVAKGVTKRIGGPM 295

Query: 303 HEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLV 362
           HE AAKVDEYARGMI   GSTLFEELGLYYIGPVDGHNI+DL+++L+EV +  S GPVL+
Sbjct: 296 HELAAKVDEYARGMISGTGSTLFEELGLYYIGPVDGHNIDDLVAILKEVKTTNSTGPVLI 355

Query: 363 HVVTEENRRAEDTQKSEAIEKQQEGAS----DSNSLPFGNYSRTYDDCFIEALVMEAEKD 418
           HV+TE+ R     QK  A +K    A               +++Y   F EAL+ EA+ D
Sbjct: 356 HVITEKGRGYPYAQK--AADKYHGVAKFDPPTGKQFKVAAKTQSYTTYFAEALIAEAKAD 413

Query: 419 KDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFL 478
           KDI+ +HA M     + +F  +FP R FDVG+AEQHAVTF+AGLAC GLKPFC I S+FL
Sbjct: 414 KDIIAIHAAMGGGTGMNIFHRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFL 473

Query: 479 QRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDE 538
           QRAYDQVV+DVD Q+LPVRF +  AGLVGSDGPT  G+FD+TFM+CLPNM+VMAPSDE E
Sbjct: 474 QRAYDQVVHDVDLQKLPVRFAMDRAGLVGSDGPTHSGSFDVTFMACLPNMVVMAPSDEAE 533

Query: 539 LVDMVATVASIDDRPVCFRYPRGAIVRTDLPG-YRGIPIEIGKGKVLVEGKDVALLGYGA 597
           L  MVAT A+IDDRP CFRYPRG  +  +LP  Y+GIP+EIGKG++L+EG+ VALLGYG+
Sbjct: 534 LCHMVATAAAIDDRPSCFRYPRGNGIGVELPTEYKGIPLEIGKGRILIEGERVALLGYGS 593

Query: 598 MVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHV 657
            VQNCL A +L+ + G+ +TVADARFCKPLD  L+R L ++H  LITVEEGSIGGFGSHV
Sbjct: 594 AVQNCLAAASLVEQHGLRLTVADARFCKPLDRSLIRSLAKSHEVLITVEEGSIGGFGSHV 653

Query: 658 SHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREAL 717
           + F+ALDGLLD  +KWRP+VLPD YI+H SP  QL +AGLT  HIAAT  ++LG+TREAL
Sbjct: 654 AQFMALDGLLDGNLKWRPVVLPDRYIDHGSPADQLCMAGLTPSHIAATVFNILGQTREAL 713

Query: 718 LLM 720
            +M
Sbjct: 714 EVM 716


>gi|357478563|ref|XP_003609567.1| 1-deoxy-D-xylulose 5-phosphate synthase [Medicago truncatula]
 gi|355510622|gb|AES91764.1| 1-deoxy-D-xylulose 5-phosphate synthase [Medicago truncatula]
          Length = 717

 Score =  825 bits (2130), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 400/663 (60%), Positives = 503/663 (75%), Gaps = 8/663 (1%)

Query: 64  CALPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKS 123
            +L ++ +++  + PTP+LD +  P+ +K+L+ KELKQLA E+RS++   VS+T   L S
Sbjct: 56  ASLSEMGEYYSQRPPTPLLDTINYPIHMKNLSTKELKQLADELRSDVIFSVSRTGGHLGS 115

Query: 124 SLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSE 183
           SL  VELT+ALH+VF+ P DKILWDVG Q+Y HKILTGRR  +HT+R+ +G+SG+T RSE
Sbjct: 116 SLGVVELTIALHYVFNTPQDKILWDVGHQSYPHKILTGRRDKMHTMRQTNGLSGFTKRSE 175

Query: 184 SEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDS 243
           SEYD F  GH   ++SAGLGMAV RD+KG++  +V VI +G   AGQAYEAM+NAGYLDS
Sbjct: 176 SEYDSFGTGHSSTTISAGLGMAVGRDLKGRKNDVVAVIGDGAMTAGQAYEAMNNAGYLDS 235

Query: 244 NMIVILNDSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGM 302
           +MIVILND++  SL     + P   + ALSS LSR+QS+K  R+LREVAKG+TKRIG  M
Sbjct: 236 DMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNKPLRELREVAKGVTKRIGGPM 295

Query: 303 HEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLV 362
           HE AAKVDEYARGMI   GSTLFEELGLYYIGPVDGHNI+DL+++L+EV +  S GPVL+
Sbjct: 296 HELAAKVDEYARGMISGTGSTLFEELGLYYIGPVDGHNIDDLVAILKEVKTTNSTGPVLI 355

Query: 363 HVVTEENRRAEDTQKSEAIEKQQEGAS----DSNSLPFGNYSRTYDDCFIEALVMEAEKD 418
           HV+TE+ R     +K  A +K    A               +++Y   F EAL+ EA+ D
Sbjct: 356 HVITEKGRGYPYAEK--AADKYHGVAKFDPPTGKQFKVAAKTQSYTTYFAEALIAEAKAD 413

Query: 419 KDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFL 478
           KDI+ +HA M     + +F  +FP R FDVG+AEQHAVTF+AGLAC GLKPFC I S+FL
Sbjct: 414 KDIIAIHAAMGGGTGMNIFHRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFL 473

Query: 479 QRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDE 538
           QRAYDQVV+DVD Q+LPVRF +  AGLVGSDGPT  G+FD+TFM+CLPNM+VMAPSDE E
Sbjct: 474 QRAYDQVVHDVDLQKLPVRFAMDRAGLVGSDGPTHSGSFDVTFMACLPNMVVMAPSDEAE 533

Query: 539 LVDMVATVASIDDRPVCFRYPRGAIVRTDLPG-YRGIPIEIGKGKVLVEGKDVALLGYGA 597
           L  MVAT A+IDDRP CFRYPRG  +  +LP  Y+GIP+EIGKG++L+EG+ VALLGYG+
Sbjct: 534 LCHMVATAAAIDDRPSCFRYPRGNGIGVELPTEYKGIPLEIGKGRILIEGERVALLGYGS 593

Query: 598 MVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHV 657
            VQNCL A +L+ + G+ +TVADARFCKPLD  L+R L ++H  LITVEEGSIGGFGSHV
Sbjct: 594 AVQNCLAAASLVEQHGLRLTVADARFCKPLDRSLIRSLAKSHEVLITVEEGSIGGFGSHV 653

Query: 658 SHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREAL 717
           + F+ALDGLLD  +KWRP+VLPD YI+H SP  QL +AGLT  HIAAT  ++LG+TREAL
Sbjct: 654 AQFMALDGLLDGNLKWRPVVLPDRYIDHGSPADQLCMAGLTPSHIAATVFNILGQTREAL 713

Query: 718 LLM 720
            +M
Sbjct: 714 EVM 716


>gi|255551595|ref|XP_002516843.1| 1-deoxyxylulose-5-phosphate synthase, putative [Ricinus communis]
 gi|223543931|gb|EEF45457.1| 1-deoxyxylulose-5-phosphate synthase, putative [Ricinus communis]
          Length = 720

 Score =  824 bits (2128), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 411/711 (57%), Positives = 515/711 (72%), Gaps = 26/711 (3%)

Query: 23  DQRKIEFLSSNISRELEISRINLCPSSSSITSSKLVTVSRICALPDIDDFFWDKEPTPIL 82
           D +K  ++SSN   + ++    L  S       K        +L +  ++   + PTP+L
Sbjct: 21  DLQKSNYVSSNFLLKTDL----LGQSMQKFNQGKKRPAGVCASLSETGEYHSQRPPTPLL 76

Query: 83  DLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPV 142
           D +  P+ +K+L+IKELKQL+ E+RS++   VS T   L SSL  VELTVALH+VF+AP 
Sbjct: 77  DTINYPIHMKNLSIKELKQLSDELRSDVIFNVSITGGHLGSSLGVVELTVALHYVFNAPQ 136

Query: 143 DKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGL 202
           DKILWDVG Q+Y HKILTGRR  + T+R+ +G+SG+T RSESEYD F  GH   ++SAGL
Sbjct: 137 DKILWDVGHQSYPHKILTGRRDKMQTMRQTNGLSGFTKRSESEYDCFGTGHSSTTISAGL 196

Query: 203 GMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKIE- 261
           GMAV RD+KG++  +V VI +G   AGQAYEAM+NAGYLDS+MIVILND++    P    
Sbjct: 197 GMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTANL 256

Query: 262 ESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQG 321
           + P   + ALSS LSR+QS+K  R+LREVAKG+TKRIG  MHE AAKVDEYARGMI   G
Sbjct: 257 DGPIPPVGALSSALSRLQSNKPLRELREVAKGVTKRIGGPMHELAAKVDEYARGMISGSG 316

Query: 322 STLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR------RAED- 374
           STLFEELGLYYIGPVDGHN++DL+++L+EV S  + GPVL+HVVTE+ R      +A D 
Sbjct: 317 STLFEELGLYYIGPVDGHNVDDLVAILKEVKSTKTTGPVLIHVVTEKGRGYPYAEKAADK 376

Query: 375 ----TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
               T+   A  KQ +G++ + S         Y   F EAL+ EAE DKD+V +HA M  
Sbjct: 377 YHGVTKFDPATGKQFKGSASTQS---------YTTYFAEALIAEAEVDKDVVAIHAAMGG 427

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L LF  +FP R FDVG+AEQHAVTF+AGLAC GLKPFC I S+F+QRAYDQVV+DVD
Sbjct: 428 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 487

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q+LPVRF +  AGLVG+DGPT CGAFD+TFM+CLPNM+VMAPSDE EL  MVAT A+ID
Sbjct: 488 LQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 547

Query: 551 DRPVCFRYPRGAIVRTDL-PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALL 609
           DRP CFRYPRG  +   L PG +GIP+E+GKG++L+EG+ VALLGYG+ VQ+CL A +L+
Sbjct: 548 DRPSCFRYPRGNGIGVQLPPGNKGIPLEVGKGRILIEGERVALLGYGSAVQSCLAAASLM 607

Query: 610 SKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDS 669
               + +TVADARFCKPLD  L+R L ++H  LITVEEGSIGGFGSHV+HF+ALDGLLD 
Sbjct: 608 ETYDLRITVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVAHFLALDGLLDG 667

Query: 670 GVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLLM 720
            +KWRP++LPD YI+H SP  QL  AGLT  HIAAT  ++LG  REAL +M
Sbjct: 668 KLKWRPVILPDRYIDHGSPADQLVEAGLTPSHIAATIFNILGNKREALQIM 718


>gi|302764446|ref|XP_002965644.1| 1-deoxy-D-xylulose-5-phosphate synthase [Selaginella
           moellendorffii]
 gi|300166458|gb|EFJ33064.1| 1-deoxy-D-xylulose-5-phosphate synthase [Selaginella
           moellendorffii]
          Length = 636

 Score =  821 bits (2121), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 407/642 (63%), Positives = 490/642 (76%), Gaps = 22/642 (3%)

Query: 91  LKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDKILWDVG 150
           +K+L + +L+QLA E+R+E    VSKT   L SSL  VELTVALHHVF+ P DKILWDVG
Sbjct: 1   MKNLGVSDLEQLAEELRNETIFSVSKTGGHLGSSLGVVELTVALHHVFNTPEDKILWDVG 60

Query: 151 EQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDI 210
            QTY HKILTGRRS +HTLR+ DGI G+T RSESEYDPF AGH   ++SAGLGMAVARD+
Sbjct: 61  HQTYPHKILTGRRSRMHTLRQTDGICGFTKRSESEYDPFGAGHSSTTISAGLGMAVARDL 120

Query: 211 KGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH-SLHPKIEESPKTSIN 269
           +GK+  ++ VI +G   AGQAYEAM+NAGYLD+NMIVILND++  SL     + P   + 
Sbjct: 121 QGKKNNVIAVIGDGAMTAGQAYEAMNNAGYLDTNMIVILNDNKQVSLPTATLDGPAPPVG 180

Query: 270 ALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEELG 329
           ALSS LSR+QSSK  R+LREVAKG+TK+IG  MH+ AAKVDEYARGMI   G+T FEELG
Sbjct: 181 ALSSALSRLQSSKKLRELREVAKGVTKQIGGHMHQLAAKVDEYARGMISGTGATFFEELG 240

Query: 330 LYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR------RAED-----TQKS 378
           LYYIGPVDGH I+DLI++L+EV +  ++GPVL+HVVTE+        RA D      +  
Sbjct: 241 LYYIGPVDGHRIDDLITILKEVKAAETIGPVLIHVVTEKGHGYPYAERAADKYHGVVKFD 300

Query: 379 EAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQ 438
            A  KQQ+G            ++ Y   F E+LV EA+KD+ IV +HA M     L +FQ
Sbjct: 301 PATGKQQKGKP---------ATKAYTTYFAESLVAEAQKDESIVAIHAAMGGGTGLNIFQ 351

Query: 439 EKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRF 498
           ++FPER FDVG+AEQHAVTF+AGLA  G+KPFC I S+FLQR YDQVV+DVD Q+LPVRF
Sbjct: 352 KQFPERCFDVGIAEQHAVTFAAGLASEGIKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRF 411

Query: 499 VITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRY 558
            +  AGLVG+DGPT CGAFD+T+M+CLPNM+VMAP+DE EL+ M+AT A+IDDRP CFRY
Sbjct: 412 AMDRAGLVGADGPTHCGAFDVTYMACLPNMVVMAPADEAELMHMIATAAAIDDRPSCFRY 471

Query: 559 PRGAIVRTDLP-GYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVT 617
           PRG  +   LP G +G P+EIGKG++LVEG  VALLGYG MVQNCL AR LL + G+ VT
Sbjct: 472 PRGNGIGALLPAGNKGTPVEIGKGRILVEGSRVALLGYGTMVQNCLGARNLLQEHGLSVT 531

Query: 618 VADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWRPIV 677
           VADARFCKPLD +LVR+L + H  LITVEEGSIGGFGSHV HF+ALDGLLD  +KWRPIV
Sbjct: 532 VADARFCKPLDQQLVRQLAKEHEVLITVEEGSIGGFGSHVVHFLALDGLLDGKLKWRPIV 591

Query: 678 LPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLL 719
           LPD YI+H SP  Q+A AGLT  HIAATALS+LG+TREAL L
Sbjct: 592 LPDRYIDHGSPQDQMAEAGLTSSHIAATALSMLGKTREALHL 633


>gi|343466207|gb|AEM42997.1| 1-deoxyxylulose-5-phosphate synthase [Siraitia grosvenorii]
          Length = 719

 Score =  820 bits (2119), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 404/670 (60%), Positives = 503/670 (75%), Gaps = 22/670 (3%)

Query: 64  CALPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKS 123
            +L +  ++   + PTP+LD +  P+ +K+L+IKEL QLA E+RS++   VSKT   L S
Sbjct: 58  ASLSETGEYPSQRPPTPLLDTINYPIHMKNLSIKELYQLADEVRSDVIFNVSKTGGHLGS 117

Query: 124 SLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSE 183
           SL  VELTVALH+VF+AP D+ILWDVG Q+Y HKILTGRR  + T+R+ +G+SG+T RSE
Sbjct: 118 SLGVVELTVALHYVFNAPQDRILWDVGHQSYPHKILTGRRDKMSTIRQTNGLSGFTKRSE 177

Query: 184 SEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDS 243
           SE+D F AGH   ++SAGLGMAV RD+KG++  +V VI +G   AGQAYEAM+NAGYLDS
Sbjct: 178 SEFDCFGAGHSSTTISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDS 237

Query: 244 NMIVILNDSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGM 302
           +MIVILND++  SL     + P   + ALSS LSR+QS++  R+LREVAKG+TK+IG  M
Sbjct: 238 DMIVILNDNKQVSLPTATLDGPVPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPM 297

Query: 303 HEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLV 362
           HE AAKVDEYARGMI   GSTLFEELGLYYIGPVDGHN++DL+S+L+EV S  + GPVL+
Sbjct: 298 HELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNMDDLVSILKEVKSTNTTGPVLI 357

Query: 363 HVVTEENR------RAED-----TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEAL 411
           HVVTE+ R      RA D     T+   A  KQQ+    + S         Y   F EAL
Sbjct: 358 HVVTEKGRGYPYAERAADKYHGVTKFDPATGKQQKSKGATQS---------YTTYFAEAL 408

Query: 412 VMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFC 471
           V EAE DKDI+ +HA M     L LFQ +FP R FDVG+AEQHAVTF+AGLA  GLKPFC
Sbjct: 409 VAEAEVDKDIIAIHAAMGGGTGLNLFQRRFPTRCFDVGIAEQHAVTFAAGLASEGLKPFC 468

Query: 472 IIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVM 531
            I S+F+QRAYDQVV+DVD Q+LPVRF +  AGLVG+DGPT CG+FD+TFM+CLPNM+VM
Sbjct: 469 AIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVM 528

Query: 532 APSDEDELVDMVATVASIDDRPVCFRYPRGAIVRTDL-PGYRGIPIEIGKGKVLVEGKDV 590
           APSDE  L +MVAT A+IDDRP CFRYPRG  +  +L PG +G+P+E+GKG++L+EG+ V
Sbjct: 529 APSDEAGLFNMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGVPVEVGKGRILLEGERV 588

Query: 591 ALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI 650
           ALLGYG  VQNCL A +L+ + G+ +TVAD RFCKPLD  L+R L ++H  LITVEEGSI
Sbjct: 589 ALLGYGTAVQNCLTAASLVERHGLRITVADGRFCKPLDRALIRSLAKSHEILITVEEGSI 648

Query: 651 GGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
           GGFGSHV  F+ALDGLLD  ++WRP+VLPD YI+H SP  QLA AGLT  HIAAT  ++L
Sbjct: 649 GGFGSHVIQFLALDGLLDGNLRWRPLVLPDRYIDHGSPADQLAEAGLTPSHIAATVFNML 708

Query: 711 GRTREALLLM 720
           G+TREAL +M
Sbjct: 709 GQTREALEIM 718


>gi|340764673|gb|AEK69518.1| chloroplast 1-deoxy-D-xylulose-5-phosphate synthase 1 [Alpinia
           officinarum]
          Length = 715

 Score =  820 bits (2118), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 411/674 (60%), Positives = 504/674 (74%), Gaps = 23/674 (3%)

Query: 61  SRICA-LPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEK 119
           S +CA L +I ++   + PTP+LD +  P+ +K+L+IKELKQL+ E+RS++   VSKT  
Sbjct: 50  SCVCASLSEIGEYHSQRPPTPLLDTINYPIHMKNLSIKELKQLSEELRSDVIFNVSKTGG 109

Query: 120 SLKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYT 179
            L SSL  VELTVALH+VF+AP DKI WDVG Q+Y HKILTGRR  + TLR+ DG+SG+T
Sbjct: 110 HLGSSLGVVELTVALHYVFNAPRDKIPWDVGHQSYPHKILTGRRDKMQTLRQTDGLSGFT 169

Query: 180 SRSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAG 239
            RSES+YD F AGH   S+SA LGMAV RD+ G++  ++ VI +G   AGQAYEAM+NAG
Sbjct: 170 KRSESDYDAFGAGHSSTSISAALGMAVGRDLMGRKNNVIAVIGDGAMTAGQAYEAMNNAG 229

Query: 240 YLDSNMIVILNDSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRI 298
           YLDS+MIVILND++  SL     + P   + ALSSTLSR+QSSK  R+LREVAKGMTKRI
Sbjct: 230 YLDSDMIVILNDNKQVSLPTATLDGPVPPVGALSSTLSRLQSSKPLRELREVAKGMTKRI 289

Query: 299 GRGMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMG 358
           G  MHE AAKVDEYARGMI   GSTLFEELGLYYIGPVDGHNI+DL+++L+EV S  + G
Sbjct: 290 GGSMHEIAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDLVTILKEVKSTKTTG 349

Query: 359 PVLVHVVTEENR------RAED-----TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCF 407
           PVL+HVVTE+ R      RA D     T+   A  KQ + +S + S         Y + F
Sbjct: 350 PVLIHVVTEKGRGYPYAERAADKYHGVTRFDPATGKQFKSSSQTKS---------YTNYF 400

Query: 408 IEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGL 467
            +ALV EAE DKDIV +HA M     L  F  KFP+R FDVG+AEQHAVTF+AGL C GL
Sbjct: 401 ADALVAEAEVDKDIVAIHAAMGGGTGLNHFLRKFPDRCFDVGIAEQHAVTFAAGLTCEGL 460

Query: 468 KPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPN 527
           KPFC I S+FLQRAYDQVV+DVD Q+LPVRF +  AGLVG+DGPT  GAFD+ +M+CLPN
Sbjct: 461 KPFCAIYSSFLQRAYDQVVHDVDLQKLPVRFALDRAGLVGADGPTHSGAFDVAYMACLPN 520

Query: 528 MIVMAPSDEDELVDMVATVASIDDRPVCFRYPRGAIVRTD-LPGYRGIPIEIGKGKVLVE 586
           M+VMAPSDE EL  MVAT A+IDDRP CFRYPRG  V    LPG +G+P+EIGKG++L+E
Sbjct: 521 MVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGVGVPLLPGNKGVPLEIGKGRILIE 580

Query: 587 GKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVE 646
           G+ VALLGYG  VQ+CL A +++   G+ +TVADARFCKPLD  L+R L ++H  LITVE
Sbjct: 581 GERVALLGYGTAVQSCLAAXSMVELQGLKITVADARFCKPLDRSLIRSLAKSHEVLITVE 640

Query: 647 EGSIGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATA 706
           EGSIGGF SHV+ F+ALDGLLD  +KWRP+VLPD YI+H SP  QLA AGLT  HIAA+ 
Sbjct: 641 EGSIGGFSSHVAQFMALDGLLDGKLKWRPLVLPDRYIDHGSPRDQLAEAGLTPSHIAASV 700

Query: 707 LSLLGRTREALLLM 720
            +++G+TREAL +M
Sbjct: 701 FNIIGQTREALKMM 714


>gi|168015770|ref|XP_001760423.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162688437|gb|EDQ74814.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 736

 Score =  820 bits (2118), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 405/692 (58%), Positives = 507/692 (73%), Gaps = 17/692 (2%)

Query: 42  RINLCPSSSSITSSKLVTV--SRICA--LPDIDDFFWDKEP-TPILDLVENPLRLKSLTI 96
           ++NL   S S++   L     SR+ A  + + D  +  ++P TP+LD +  P+ +K+LT+
Sbjct: 43  KMNLSKESQSVSIEYLGVQEKSRVVATAVTETDAEYPSEKPLTPLLDTINYPIHMKNLTV 102

Query: 97  KELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYAH 156
           +ELKQL  E+R+E    VSKT   L SSL  VELTVALHHVF+ P DKILWDVG QTY H
Sbjct: 103 RELKQLVDELRAETIHTVSKTGGHLGSSLGVVELTVALHHVFNTPEDKILWDVGHQTYPH 162

Query: 157 KILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKREC 216
           KILTGRR  + TLR+  GISG+  R+ESEYDPF AGH   S+SAGLGMAV RD+KG+   
Sbjct: 163 KILTGRRGKMRTLRQTAGISGFVKRAESEYDPFGAGHSSTSISAGLGMAVGRDLKGRTNN 222

Query: 217 IVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH-SLHPKIEESPKTSINALSSTL 275
           ++ VI +G   AGQAYEAM+NAGYLD NMIVILND++  SL     + P   + ALSS L
Sbjct: 223 VIAVIGDGAMTAGQAYEAMNNAGYLDCNMIVILNDNKQVSLPTATLDGPAPPVGALSSAL 282

Query: 276 SRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGP 335
           S++QSS+  R+LREVAKG+TK++G   H  AAKVDEYARGMI   GSTLFEELGLYYIGP
Sbjct: 283 SKLQSSRPLRELREVAKGVTKQLGGSAHVLAAKVDEYARGMISGSGSTLFEELGLYYIGP 342

Query: 336 VDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR------RAEDTQKSEAIEKQQEGAS 389
           V+GHN+EDL+++L+EV +  + GPVL+H+VTE+ R      RA D  K   + K      
Sbjct: 343 VNGHNLEDLVTILREVKNTATTGPVLIHLVTEKGRGYPYAERAAD--KYHGVVKFDPATG 400

Query: 390 DSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVG 449
             + +     ++ Y   F EAL+ EAE DK IV +HA M     + +F ++FPER FDVG
Sbjct: 401 KQHKVK--TATQAYTTYFAEALIAEAELDKSIVGIHAAMGGGTGMNMFAKRFPERCFDVG 458

Query: 450 MAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSD 509
           +AEQHAVTF+AGLAC GL+PFC I S+FLQR YDQVV+DVD Q+LPVRF +  AGLVG+D
Sbjct: 459 IAEQHAVTFAAGLACEGLRPFCSIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGAD 518

Query: 510 GPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYPRGAIVRTDLP 569
           GPT CGAFD+T+M+CLPNM+VMAP+DE EL +MVAT A IDD P CFRYPRG  +   LP
Sbjct: 519 GPTHCGAFDVTYMACLPNMVVMAPADEAELFNMVATAAVIDDSPSCFRYPRGNGIGVQLP 578

Query: 570 G-YRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLD 628
              +G PIE+GKG++L+EG DVALLGYG MVQNCL A +LL+ +GI  TVAD RFCKPLD
Sbjct: 579 ANNKGTPIEVGKGRILLEGTDVALLGYGTMVQNCLAAHSLLADVGISATVADGRFCKPLD 638

Query: 629 IKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASP 688
             L+R+L +NH  LITVEEG++GGFGSHV+ F+ALDGLLD  +KWRP+VLPD YIEH +P
Sbjct: 639 RGLIRQLAENHQVLITVEEGAVGGFGSHVAQFMALDGLLDGKLKWRPLVLPDRYIEHGAP 698

Query: 689 TQQLALAGLTGHHIAATALSLLGRTREALLLM 720
             Q A AGLT  HIAATAL++LG+TR+AL +M
Sbjct: 699 NDQFAEAGLTAGHIAATALNVLGKTRQALQIM 730


>gi|189017038|gb|ACD70396.1| putative chloroplast 1-deoxy-D-xylulose 5-phosphate synthase
           [Populus trichocarpa]
          Length = 685

 Score =  820 bits (2117), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 412/671 (61%), Positives = 500/671 (74%), Gaps = 21/671 (3%)

Query: 63  ICA-LPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSL 121
           ICA L +  ++   + PTP+LD +  P+ +K+L++KELKQLA E+RS++   VSKT   L
Sbjct: 21  ICASLSERGEYHSQRPPTPLLDTINYPIHMKNLSVKELKQLADELRSDVIFNVSKTGGHL 80

Query: 122 KSSLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSR 181
            SSL  VELTVALH+VF+AP DKILWDVG Q+Y HKILTGRR  +HT+R+ +G++G+T R
Sbjct: 81  GSSLGVVELTVALHYVFNAPQDKILWDVGHQSYPHKILTGRRDKMHTIRQTNGLAGFTKR 140

Query: 182 SESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL 241
           SESEYD F  GH   ++SAGLGMAV RD+KG    +V VI +G   AGQAYEAM+NAGYL
Sbjct: 141 SESEYDCFGTGHSSTTISAGLGMAVGRDLKGGTNKVVAVIGDGAMTAGQAYEAMNNAGYL 200

Query: 242 DSNMIVILNDSRHSLHPKIE-ESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGR 300
           DS+MIVILND++    P    + P   + ALSS LSR+QS++  R+LREVAKG+TK+IG 
Sbjct: 201 DSDMIVILNDNKQVSLPTANLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGG 260

Query: 301 GMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPV 360
            MHE AAKVDEYARGMI   GSTLFEELGLYYIGPVDGHNI+DLI++L+EV S  + GPV
Sbjct: 261 PMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDLIAILKEVKSTKTTGPV 320

Query: 361 LVHVVTEENR------RAED----TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEA 410
           L+HVVTE+ R      RA D      K +    +Q  AS S        +++Y   F EA
Sbjct: 321 LIHVVTEKGRGYPFAERAADKYHGVAKFDPATGKQFKASPS--------TQSYTTYFAEA 372

Query: 411 LVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPF 470
           L  EAE DKDIV +HA M     L LF  +FP R FDVG+AEQHAVTF+AGLAC GLKPF
Sbjct: 373 LTAEAEVDKDIVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPF 432

Query: 471 CIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIV 530
           C I S+FLQRAYDQVV+DVD Q+LPVRF +  AGLVG+DGPT CGAFD+TFM+CLPNM+V
Sbjct: 433 CAIYSSFLQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMACLPNMVV 492

Query: 531 MAPSDEDELVDMVATVASIDDRPVCFRYPRGAIVRTDL-PGYRGIPIEIGKGKVLVEGKD 589
           MAPSDE EL  MVAT  +IDDRP CFRYPRG  V   L PG +G+P+E+GKG++L+EG+ 
Sbjct: 493 MAPSDEAELFHMVATATAIDDRPSCFRYPRGNGVGVQLPPGNKGVPLEVGKGRMLIEGER 552

Query: 590 VALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS 649
           VALLGYG  VQ+CL A +LL + GI +TVADARFCKPLD  L+R L ++H  LITVEEGS
Sbjct: 553 VALLGYGTAVQSCLAAASLLERHGIRLTVADARFCKPLDHALIRSLAKSHEILITVEEGS 612

Query: 650 IGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSL 709
           IGGFGSHV  F+ALDGLLD  +KWRP+VLPD YI+H SP  QL  AGLT  HIAAT  S+
Sbjct: 613 IGGFGSHVVQFLALDGLLDGKLKWRPVVLPDRYIDHGSPADQLVEAGLTPSHIAATVFSI 672

Query: 710 LGRTREALLLM 720
           LG+ REAL +M
Sbjct: 673 LGQRREALEIM 683


>gi|15234642|ref|NP_193291.1| Deoxyxylulose-5-phosphate synthase [Arabidopsis thaliana]
 gi|13124705|sp|Q38854.2|DXS_ARATH RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic; Short=1-deoxyxylulose-5-phosphate
           synthase; Short=DXP synthase; Short=DXPS; AltName:
           Full=Protein CLOROPLASTOS ALTERADOS 1; Flags: Precursor
 gi|5281019|emb|CAB45992.1| DEF (CLA1) protein [Arabidopsis thaliana]
 gi|7268304|emb|CAB78598.1| DEF (CLA1) protein [Arabidopsis thaliana]
 gi|26983842|gb|AAN86173.1| putative DEF (CLA1) protein [Arabidopsis thaliana]
 gi|332658225|gb|AEE83625.1| Deoxyxylulose-5-phosphate synthase [Arabidopsis thaliana]
 gi|392931109|gb|AFM91070.1| 1-deoxy-D-xylulose 5-phosphate synthase [synthetic construct]
          Length = 717

 Score =  818 bits (2114), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 406/683 (59%), Positives = 513/683 (75%), Gaps = 17/683 (2%)

Query: 45  LCPSSSSITSSKLVTVSRICA-LPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLA 103
           L P+++S ++ +    +++CA L +  +++ ++ PTP+LD +  P+ +K+L++KELKQL+
Sbjct: 43  LKPNNNSHSNRR----AKVCASLAEKGEYYSNRPPTPLLDTINYPIHMKNLSVKELKQLS 98

Query: 104 VEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRR 163
            E+RS++   VSKT   L SSL  VELTVALH++F+ P DKILWDVG Q+Y HKILTGRR
Sbjct: 99  DELRSDVIFNVSKTGGHLGSSLGVVELTVALHYIFNTPQDKILWDVGHQSYPHKILTGRR 158

Query: 164 SLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISN 223
             + T+R+ +G+SG+T R ESE+D F  GH   ++SAGLGMAV RD+KGK   +V VI +
Sbjct: 159 GKMPTMRQTNGLSGFTKRGESEHDCFGTGHSSTTISAGLGMAVGRDLKGKNNNVVAVIGD 218

Query: 224 GTTMAGQAYEAMSNAGYLDSNMIVILNDSRH-SLHPKIEESPKTSINALSSTLSRIQSSK 282
           G   AGQAYEAM+NAGYLDS+MIVILND++  SL     + P   + ALSS LSR+QS+ 
Sbjct: 219 GAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPSPPVGALSSALSRLQSNP 278

Query: 283 SFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIE 342
           + R+LREVAKGMTK+IG  MH+ AAKVDEYARGMI   GS+LFEELGLYYIGPVDGHNI+
Sbjct: 279 ALRELREVAKGMTKQIGGPMHQLAAKVDEYARGMISGTGSSLFEELGLYYIGPVDGHNID 338

Query: 343 DLISVLQEVASLGSMGPVLVHVVTEENR------RAEDTQKSEAIEKQQEGASDSNSLPF 396
           DL+++L+EV S  + GPVL+HVVTE+ R      RA+D  K   + K     +       
Sbjct: 339 DLVAILKEVKSTRTTGPVLIHVVTEKGRGYPYAERADD--KYHGVVKFDP--ATGRQFKT 394

Query: 397 GNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAV 456
            N +++Y   F EALV EAE DKD+V +HA M     L LFQ +FP R FDVG+AEQHAV
Sbjct: 395 TNKTQSYTTYFAEALVAEAEVDKDVVAIHAAMGGGTGLNLFQRRFPTRCFDVGIAEQHAV 454

Query: 457 TFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGA 516
           TF+AGLAC GLKPFC I S+F+QRAYDQVV+DVD Q+LPVRF +  AGLVG+DGPT CGA
Sbjct: 455 TFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGA 514

Query: 517 FDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYPRGAIVRTDL-PGYRGIP 575
           FD+TFM+CLPNMIVMAPSDE +L +MVAT  +IDDRP CFRYPRG  +   L PG +G+P
Sbjct: 515 FDVTFMACLPNMIVMAPSDEADLFNMVATAVAIDDRPSCFRYPRGNGIGVALPPGNKGVP 574

Query: 576 IEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVREL 635
           IEIGKG++L EG+ VALLGYG+ VQ+CL A  +L + G++VTVADARFCKPLD  L+R L
Sbjct: 575 IEIGKGRILKEGERVALLGYGSAVQSCLGAAVMLEERGLNVTVADARFCKPLDRALIRSL 634

Query: 636 CQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALA 695
            ++H  LITVEEGSIGGFGSHV  F+ALDGLLD  +KWRP+VLPD YI+H +P  QLA A
Sbjct: 635 AKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGKLKWRPMVLPDRYIDHGAPADQLAEA 694

Query: 696 GLTGHHIAATALSLLGRTREALL 718
           GL   HIAATAL+L+G  REAL 
Sbjct: 695 GLMPSHIAATALNLIGAPREALF 717


>gi|297804692|ref|XP_002870230.1| hypothetical protein ARALYDRAFT_493326 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297316066|gb|EFH46489.1| hypothetical protein ARALYDRAFT_493326 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 717

 Score =  818 bits (2114), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 407/689 (59%), Positives = 516/689 (74%), Gaps = 17/689 (2%)

Query: 39  EISRINLCPSSSSITSSKLVTVSRICA-LPDIDDFFWDKEPTPILDLVENPLRLKSLTIK 97
           ++S   L P+++S T+ +    +++ A L +  +++ ++ PTP+LD +  P+ +K+L++K
Sbjct: 37  DLSSPCLRPNNNSHTNRR----AKVNASLAEKGEYYANRPPTPLLDTINYPIHMKNLSVK 92

Query: 98  ELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYAHK 157
           ELKQL+ E+RS++   VSKT   L SSL  VELTVALH++F+ P DKILWDVG Q+Y HK
Sbjct: 93  ELKQLSDELRSDVIFNVSKTGGHLGSSLGVVELTVALHYIFNTPQDKILWDVGHQSYPHK 152

Query: 158 ILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECI 217
           ILTGRR  + T+R+ +G+SG+T R ESE+D F  GH   ++SAGLGMAV RD+KGK   +
Sbjct: 153 ILTGRRGKMPTMRQTNGLSGFTKRGESEHDCFGTGHSSTTISAGLGMAVGRDLKGKNNNV 212

Query: 218 VTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH-SLHPKIEESPKTSINALSSTLS 276
           V VI +G   AGQAYEAM+NAGYLDS+MIVILND++  SL     + P   + ALSS LS
Sbjct: 213 VAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPSPPVGALSSALS 272

Query: 277 RIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPV 336
           R+QS+ + R+LREVAKGMTK+IG  MH+ AAKVDEYARGMI   GS+LFEELGLYYIGPV
Sbjct: 273 RLQSNPALRELREVAKGMTKQIGGPMHQLAAKVDEYARGMISGTGSSLFEELGLYYIGPV 332

Query: 337 DGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR------RAEDTQKSEAIEKQQEGASD 390
           DGHNI+DL+++L+EV S  + GPVL+HVVTE+ R      RA+D  K   + K     + 
Sbjct: 333 DGHNIDDLVAILKEVKSTRTTGPVLIHVVTEKGRGYPYAERADD--KYHGVVKFDP--AT 388

Query: 391 SNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGM 450
                  N +++Y   F EALV EAE DKD+V +HA M     L LFQ +FP R FDVG+
Sbjct: 389 GKQFKSTNKTQSYTTYFAEALVAEAEVDKDVVAIHAAMGGGTGLNLFQRRFPTRCFDVGI 448

Query: 451 AEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDG 510
           AEQHAVTF+AGLAC GLKPFC I S+F+QRAYDQVV+DVD Q+LPVRF +  AGLVG+DG
Sbjct: 449 AEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADG 508

Query: 511 PTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYPRGAIVRTDL-P 569
           PT CGAFD+TFM+CLPNMIVMAPSDE +L +MVAT A+IDDRP CFRYPRG  +   L P
Sbjct: 509 PTHCGAFDVTFMACLPNMIVMAPSDEADLFNMVATAAAIDDRPSCFRYPRGNGIGVALPP 568

Query: 570 GYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDI 629
           G +G+P+EIGKG++L EG+ VALLGYG+ VQ+CL A  +L + G++VTVADARFCKPLD 
Sbjct: 569 GNKGVPVEIGKGRILKEGERVALLGYGSAVQSCLGAAVMLEERGLNVTVADARFCKPLDR 628

Query: 630 KLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPT 689
            L+R L ++H  LITVEEGSIGGFGSHV  F+ALDGLLD  +KWRP+VLPD YI+H +P 
Sbjct: 629 ALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGKLKWRPMVLPDRYIDHGAPA 688

Query: 690 QQLALAGLTGHHIAATALSLLGRTREALL 718
            QLA AGL   HIAATAL+L+G  REAL 
Sbjct: 689 DQLAEAGLMPSHIAATALNLIGAPREALF 717


>gi|46488696|gb|AAS99588.1| chloroplast 1-deoxy-D-xylulose-5-phosphate synthase [Elaeis
           guineensis]
          Length = 707

 Score =  817 bits (2110), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 402/663 (60%), Positives = 497/663 (74%), Gaps = 5/663 (0%)

Query: 63  ICA-LPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSL 121
           +CA L +  ++   + PTP+LD +  P+ +K+L+IKELKQL  E+RS++   VSKT   L
Sbjct: 44  VCASLSEHGEYHSQRPPTPLLDTINYPIHMKNLSIKELKQLGDELRSDIIFHVSKTGGHL 103

Query: 122 KSSLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSR 181
            SSL  VELTVALHHVF+AP DKILWDVG Q+Y HKILTGRR  + TLR+ +G+SG+T R
Sbjct: 104 GSSLGVVELTVALHHVFNAPQDKILWDVGHQSYPHKILTGRRDKMPTLRQTNGLSGFTKR 163

Query: 182 SESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL 241
           SESEYD F AGH   S+SA LGMAV RD+KG++  ++ VI +G   AGQAYEAM+NAGYL
Sbjct: 164 SESEYDSFGAGHSSTSISAALGMAVGRDLKGRKNNVIAVIGDGAMTAGQAYEAMNNAGYL 223

Query: 242 DSNMIVILNDSRHSLHPKIE-ESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGR 300
           DS+MIVILND++    P    + P   + ALSS LSR+QSS+  R+LREVAKG+TK+IG 
Sbjct: 224 DSDMIVILNDNKQVSLPTANLDGPIPPVGALSSALSRLQSSRPLRELREVAKGVTKQIGG 283

Query: 301 GMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPV 360
            MH+ AAKVDEYARGMI   GSTLFEELGLYYIGPVDGHN++DL+++L+EV S  + GPV
Sbjct: 284 SMHKLAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNMDDLVTILKEVKSTKTTGPV 343

Query: 361 LVHVVTEENRRAEDTQKSEAIEKQQEGASDSNSLPFGNYSRT--YDDCFIEALVMEAEKD 418
            +HVVTE+ R     +++            S    F + S+T  Y + F EAL+ EAE D
Sbjct: 344 FIHVVTEKGRGYPYAERAADKYHGVAKFDPSTGKQFKSRSKTQSYTNYFAEALISEAEVD 403

Query: 419 KDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFL 478
           KDIV +HA M     L  F  +FP R FDVG+AEQHAVTF+AGLAC GLKPFC I S+FL
Sbjct: 404 KDIVAIHAAMGGGTGLNYFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFL 463

Query: 479 QRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDE 538
           QRAYDQVV+DVD Q+LPVRF +  AGLVG+DGPT CG+FD+T+M+CLPNM+VM PSDE E
Sbjct: 464 QRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTYMACLPNMVVMTPSDEAE 523

Query: 539 LVDMVATVASIDDRPVCFRYPRGAIVRTDLP-GYRGIPIEIGKGKVLVEGKDVALLGYGA 597
           L  MVAT A+IDDRP CFRYPRG  V   LP G +G+P+E+GKG++L+EG+ VALLGYGA
Sbjct: 524 LFHMVATAAAIDDRPSCFRYPRGNGVGVPLPAGNKGVPLEVGKGRILIEGERVALLGYGA 583

Query: 598 MVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHV 657
            VQ CL A +LL +  + VTVADARFCKPLD  L+R L ++H  LITVEEGSIGGFGSHV
Sbjct: 584 AVQGCLAAASLLEEHSLKVTVADARFCKPLDHALIRSLARSHELLITVEEGSIGGFGSHV 643

Query: 658 SHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREAL 717
           + F+ALDGLLD  +KWRP+VLPD YI+H SP  QLA AGLT  H+AAT  ++LG+ REAL
Sbjct: 644 AQFMALDGLLDGKLKWRPLVLPDRYIDHGSPADQLAEAGLTPSHVAATVFNMLGQAREAL 703

Query: 718 LLM 720
            +M
Sbjct: 704 EIM 706


>gi|153799534|gb|ABS50518.1| 1-deoxy-D-xylulose 5-phosphate synthase type I [Picea abies]
          Length = 717

 Score =  816 bits (2108), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 397/665 (59%), Positives = 497/665 (74%), Gaps = 12/665 (1%)

Query: 64  CALPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKS 123
            AL D  +++ +K PTP+LD +  P+ +K+L+I+ELKQL+ E+RS+    V++T   L S
Sbjct: 56  AALSDQGEYYSEKPPTPLLDTINYPIHMKNLSIRELKQLSNELRSDTIFEVARTGGHLGS 115

Query: 124 SLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSE 183
           SL  VELTVALH+VF AP DKILWDVG   Y HKILTGRR  + TLR+ +G+SG+T RSE
Sbjct: 116 SLGVVELTVALHYVFDAPEDKILWDVGHXAYPHKILTGRRDKMPTLRQTNGLSGFTKRSE 175

Query: 184 SEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDS 243
           SEYD F AGH   S+SAGLGMAV RD+KG+   +++VI +G   AGQA+EAM+NAGYLDS
Sbjct: 176 SEYDCFGAGHSSTSISAGLGMAVGRDLKGRNNHVISVIGDGAMTAGQAFEAMNNAGYLDS 235

Query: 244 NMIVILNDSRHSLHPKIE-ESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGM 302
           NMIVILND++    P    + P   + ALSS LS++QSSK  R+LREVAKG+TK++G  M
Sbjct: 236 NMIVILNDNKQVSLPTANLDGPMPPVGALSSALSKLQSSKPLRELREVAKGVTKQLGAPM 295

Query: 303 HEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLV 362
           HE AAKVDEYARGMI    STLFEELGLYYIGPVDGHNI+DL+++LQ+V +  + GPVL+
Sbjct: 296 HELAAKVDEYARGMISGSRSTLFEELGLYYIGPVDGHNIDDLLTILQDVKATHTTGPVLI 355

Query: 363 HVVTEENR------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAE 416
           HVVTE+ R      RA D     A      G       P    ++TY   F EAL+ EA+
Sbjct: 356 HVVTEKGRGYPYAXRAADKYHGVAKFDPATGKQFKGKAP----TQTYTAYFAEALISEAD 411

Query: 417 KDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSA 476
            D  +V +HA M     L +F ++FP R FDVG+AEQHAVTF+AGLAC GLKPFC I S+
Sbjct: 412 IDNXVVAIHAAMGGGTGLNMFSKRFPSRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSS 471

Query: 477 FLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDE 536
           FLQRAYDQV++DVD Q+LPVRF +  AGLVG+DGPT CGAFD+T+++CLPNM+VMAPSDE
Sbjct: 472 FLQRAYDQVIHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTYLACLPNMVVMAPSDE 531

Query: 537 DELVDMVATVASIDDRPVCFRYPRGAIVRTDL-PGYRGIPIEIGKGKVLVEGKDVALLGY 595
            EL  MVAT A+IDDRP CFR+PRG  V   L PG +G+P+E+GKG++L+EG  VALLGY
Sbjct: 532 AELFHMVATAAAIDDRPSCFRFPRGNGVGARLPPGNKGVPLEVGKGRILLEGDRVALLGY 591

Query: 596 GAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGS 655
           G +VQNCL A ALL + G+ +TVADARFCKPLD  L+R L + H  +ITVEEG+IGGFGS
Sbjct: 592 GTVVQNCLAASALLEEQGLSLTVADARFCKPLDRDLIRSLAREHEVIITVEEGTIGGFGS 651

Query: 656 HVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTRE 715
           HV+HF+ALDG LD  +KWRP+VLPD+YIEH +P  Q+  AGLT  HIAA+ L++LGRTRE
Sbjct: 652 HVAHFLALDGFLDGKLKWRPMVLPDHYIEHGAPNDQMVEAGLTASHIAASVLNILGRTRE 711

Query: 716 ALLLM 720
           AL +M
Sbjct: 712 ALQVM 716


>gi|237625980|gb|ACR02668.1| chloroplast 1-deoxy-D-xylulose-5-phosphate synthase [Amomum
           villosum]
          Length = 715

 Score =  816 bits (2108), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 417/723 (57%), Positives = 519/723 (71%), Gaps = 28/723 (3%)

Query: 12  LPLTAHCHGTLDQRKIEFLSSNISRELEISRINLCPSSSSITSSKLVTVSRICA-LPDID 70
           LP   H  GT      +   SN S        +    S S+ S K    S +CA L +I 
Sbjct: 6   LPFPCHLFGTAASNHQK---SNTSSPFLTELHHRQEHSRSLKSKK--RSSCVCASLSEIG 60

Query: 71  DFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVEL 130
           ++   + PTP+LD +  P+ +K+L+++ELKQL+ E+RS++   VSKT   L SSL  VEL
Sbjct: 61  EYHSQRPPTPLLDTINYPIHMKNLSLRELKQLSEELRSDVIFNVSKTGGHLGSSLGVVEL 120

Query: 131 TVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFN 190
           TVALH+VF AP DKILWDVG Q+Y HKILTGRR  + TLR+ DG+SG+T RSES+YD F 
Sbjct: 121 TVALHYVFSAPRDKILWDVGHQSYPHKILTGRRDKMQTLRQTDGLSGFTKRSESDYDAFG 180

Query: 191 AGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
           AGH   S+SA LGMAV RD+ G++  ++ VI +G+  AGQAYEAM+NAGYLDS+MIVILN
Sbjct: 181 AGHSSTSISAALGMAVGRDLMGRKNNVIAVIGDGSMTAGQAYEAMNNAGYLDSDMIVILN 240

Query: 251 DSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKV 309
           D++  SL     + P   + ALSS LSR+QSSK  R+LREVAKG+TK+IG  MHE AAKV
Sbjct: 241 DNKQVSLPTATLDGPVPPVGALSSALSRLQSSKPLRELREVAKGVTKKIGGSMHEIAAKV 300

Query: 310 DEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN 369
           DEYARGMI   GSTLFEELGLYYIGPVDGHNI+DL+++L+EV S  + GPVL+HVVTE+ 
Sbjct: 301 DEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDLVTILKEVKSTKTTGPVLIHVVTEKG 360

Query: 370 R------RAED-----TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKD 418
           R      +A D     T+   A  KQ + +S + S         Y + F +ALV EAE D
Sbjct: 361 RGYPYAEKAADKYHGVTKFDPATGKQFKSSSQTKS---------YTNYFADALVAEAEVD 411

Query: 419 KDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFL 478
           KDIV +HA M     L  F  KFP+R FDVG+AEQHAVTF+AGL C GLKPFC I S+FL
Sbjct: 412 KDIVAIHAAMGGGTGLNYFLRKFPDRCFDVGIAEQHAVTFAAGLTCEGLKPFCAIYSSFL 471

Query: 479 QRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDE 538
           QRAYDQV++DVD Q+LPVRF +  AGLVG+DGPT  GAFD+ +M+CLPNM+VMAPSDE E
Sbjct: 472 QRAYDQVIHDVDLQKLPVRFALDRAGLVGADGPTHSGAFDVAYMACLPNMVVMAPSDEAE 531

Query: 539 LVDMVATVASIDDRPVCFRYPRGAIVRTD-LPGYRGIPIEIGKGKVLVEGKDVALLGYGA 597
           L  MVAT A+IDDRP CFRYPRG  V    LPG +G+P+EIGKG++L+EG+ VALLGYG 
Sbjct: 532 LFHMVATAAAIDDRPSCFRYPRGNGVGVPLLPGNKGVPLEIGKGRILIEGERVALLGYGT 591

Query: 598 MVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHV 657
            VQ+CL A +++   G+ +TVADARFCKPLD  L+R L ++H  LITVEEGSIGGF SHV
Sbjct: 592 AVQSCLAAASMVELQGLKITVADARFCKPLDRSLIRSLAKSHEVLITVEEGSIGGFSSHV 651

Query: 658 SHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREAL 717
           + F+ALDGLLD  +KWRP+VLPD YI+H SP  QLA AGLT  HIAA+  +++G+TREAL
Sbjct: 652 AQFMALDGLLDGKLKWRPLVLPDRYIDHGSPRDQLAEAGLTPSHIAASVFNVIGQTREAL 711

Query: 718 LLM 720
            +M
Sbjct: 712 KMM 714


>gi|194396283|gb|ACF60511.1| 1-D-deoxyxylulose 5-phosphate synthase [Nicotiana tabacum]
          Length = 717

 Score =  815 bits (2105), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 409/665 (61%), Positives = 499/665 (75%), Gaps = 12/665 (1%)

Query: 64  CALPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKS 123
            +L +  +++  + PTP+LD +  P+ +K+L++KELKQLA E+RS+    VSKT   L S
Sbjct: 56  ASLSERGEYYAQRPPTPLLDTINYPIHMKNLSVKELKQLAEELRSDTIFNVSKTGGHLGS 115

Query: 124 SLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSE 183
           SL  VELTVALH+VF+ P D+ILWDVG Q+Y HKILTGRR  + TLR+ DG++G+T RSE
Sbjct: 116 SLGVVELTVALHYVFNTPQDRILWDVGHQSYPHKILTGRRGKMSTLRQTDGLAGFTKRSE 175

Query: 184 SEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDS 243
           S YD F  GH   ++SAGLGMAV RD+KGK   ++ VI +G   AGQAYEAM+NAGYLDS
Sbjct: 176 SVYDCFGTGHSSTTISAGLGMAVGRDLKGKNNNVIAVIGDGAMTAGQAYEAMNNAGYLDS 235

Query: 244 NMIVILNDSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGM 302
           +MIVILND+R  SL     + P   + ALSS LSR+QS++  R+LREVAKG+TK+IG  M
Sbjct: 236 DMIVILNDNRQVSLPTATLDGPAPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPM 295

Query: 303 HEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLV 362
           HE AAKVDEYARGMI   GSTLFEELGLYYIGPVDGHNI+DLIS+L+EV S  + GPVL+
Sbjct: 296 HELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDLISILKEVRSTKTTGPVLI 355

Query: 363 HVVTEENR------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAE 416
           HV+TE+ R      RA D  K   + K     +          +++Y   F EAL+ EAE
Sbjct: 356 HVITEKGRGYPYAERAAD--KYHGVAKFDP--ATGKQFKVSAKTQSYTTYFAEALIAEAE 411

Query: 417 KDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSA 476
            DKDIV +HA M     + LF  +FP R FDVG+AEQHAVTF+AGLAC GLKPFC I S+
Sbjct: 412 ADKDIVAIHAAMGGGTGMNLFHRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSS 471

Query: 477 FLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDE 536
           FLQRAYDQVV+DVD Q+LPVRF +  AGLVG+DGPT CGAFD+TFM+CLPNM+VMAPSDE
Sbjct: 472 FLQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMACLPNMVVMAPSDE 531

Query: 537 DELVDMVATVASIDDRPVCFRYPRGAIVRTDLP-GYRGIPIEIGKGKVLVEGKDVALLGY 595
            EL  MVAT A+IDDRP CFRYPRG  +  +LP G +G P+E+GKG++LVEG+ VALLGY
Sbjct: 532 TELFHMVATAAAIDDRPSCFRYPRGNGIGVELPVGNKGTPLEVGKGRILVEGERVALLGY 591

Query: 596 GAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGS 655
           G+ VQNCL A A+L   G+ VTVADARFCKPLD  L+R L ++H  LITVEEGSIGGFGS
Sbjct: 592 GSAVQNCLAAAAVLETRGLQVTVADARFCKPLDGALIRSLAKSHEVLITVEEGSIGGFGS 651

Query: 656 HVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTRE 715
           HV+ F+ALDGLLD  +KWRPIVLPD YI+H SP  QLA AGLT  HIAAT  ++LG+TRE
Sbjct: 652 HVAQFMALDGLLDGKLKWRPIVLPDRYIDHGSPADQLAEAGLTPSHIAATVFNILGQTRE 711

Query: 716 ALLLM 720
           AL +M
Sbjct: 712 ALEVM 716


>gi|255068751|emb|CBA12009.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nicotiana tabacum]
          Length = 717

 Score =  815 bits (2104), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 408/665 (61%), Positives = 499/665 (75%), Gaps = 12/665 (1%)

Query: 64  CALPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKS 123
            +L +  +++  + PTP+LD +  P+ +K+L++KELKQLA E+RS+    VSKT   L S
Sbjct: 56  ASLSEKGEYYAQRPPTPLLDTINYPIHMKNLSVKELKQLAEELRSDTIFNVSKTGGHLGS 115

Query: 124 SLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSE 183
           SL  VELTVALH+VF+ P D+ILWDVG Q+Y HKILTGRR  + TLR+ DG++G+T RSE
Sbjct: 116 SLGVVELTVALHYVFNTPQDRILWDVGHQSYPHKILTGRRGKMSTLRQTDGLAGFTKRSE 175

Query: 184 SEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDS 243
           SEYD F  GH   ++SAGLGMAV RD+KGK   ++ VI +G   AGQAYEAM+NAGYLDS
Sbjct: 176 SEYDCFGTGHSSTTISAGLGMAVGRDLKGKNNNVIAVIGDGAMTAGQAYEAMNNAGYLDS 235

Query: 244 NMIVILNDSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGM 302
           +MIVILND+R  SL     + P   + ALS  LSR+QS++  R+LREVAKG+TK+IG  M
Sbjct: 236 DMIVILNDNRQVSLPTATLDGPAPPVGALSRALSRLQSNRPLRELREVAKGVTKQIGGPM 295

Query: 303 HEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLV 362
           HE AAKVDEYARGMI   GSTLFEELGLYYIGPVDGHNI+DLIS+L+EV S  + GPVL+
Sbjct: 296 HELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDLISILKEVRSTKTTGPVLI 355

Query: 363 HVVTEENR------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAE 416
           HV+TE+ R      RA D  K   + K     +          +++Y   F EAL+ EAE
Sbjct: 356 HVITEKGRGYPYAERAAD--KYHGVAKFDP--ATGKQFKVSAKTQSYTTYFAEALIAEAE 411

Query: 417 KDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSA 476
            DKDIV +HA M     + +F  +FP R FDVG+AEQHAVTF+AGLAC GLKPFC I S+
Sbjct: 412 ADKDIVAIHAAMGGGTGMNIFHRRFPNRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSS 471

Query: 477 FLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDE 536
           FLQRAYDQVV+DVD Q+LPVRF +  AGLVG+DGPT CGAFD+TFM+CLPNM+VMAPSDE
Sbjct: 472 FLQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMACLPNMVVMAPSDE 531

Query: 537 DELVDMVATVASIDDRPVCFRYPRGAIVRTDLP-GYRGIPIEIGKGKVLVEGKDVALLGY 595
            EL  MVAT A+IDDRP CFRYPRG  +  +LP G +G P+E+GKG++LVEG+ VALLGY
Sbjct: 532 TELFHMVATAAAIDDRPSCFRYPRGNGIGVELPVGNKGTPLEVGKGRILVEGERVALLGY 591

Query: 596 GAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGS 655
           G+ VQNCL A A+L   G+ VTVADARFCKPLD  L+R L ++H  LITVEEGSIGGFGS
Sbjct: 592 GSAVQNCLAAAAVLVTRGLQVTVADARFCKPLDGALIRSLAKSHEVLITVEEGSIGGFGS 651

Query: 656 HVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTRE 715
           HV+ F+ALDGLLD  +KWRPIVLPD YI+H SP  QLA AGLT  HIAAT  ++LG+TRE
Sbjct: 652 HVAQFMALDGLLDGKLKWRPIVLPDRYIDHGSPADQLAEAGLTPSHIAATVFNILGQTRE 711

Query: 716 ALLLM 720
           AL +M
Sbjct: 712 ALEVM 716


>gi|1399261|gb|AAC49368.1| DEF [Arabidopsis thaliana]
          Length = 717

 Score =  815 bits (2104), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 405/683 (59%), Positives = 512/683 (74%), Gaps = 17/683 (2%)

Query: 45  LCPSSSSITSSKLVTVSRICA-LPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLA 103
           L P+++S ++ +    +++CA L +  +++ ++ PTP+LD +  P+ +K+L++KELKQL+
Sbjct: 43  LKPNNNSHSNRR----AKVCASLAEKGEYYSNRPPTPLLDTINYPIHMKNLSVKELKQLS 98

Query: 104 VEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRR 163
            E+RS++   VSKT   L SSL  VELTVALH++F+ P DKILWDVG Q+Y HKILTGRR
Sbjct: 99  DELRSDVIFNVSKTGGHLGSSLGVVELTVALHYIFNTPQDKILWDVGHQSYPHKILTGRR 158

Query: 164 SLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISN 223
             + T+R+ +G+SG+T R ESE+D F  GH   ++SAGLGMAV RD+KGK   +V VI +
Sbjct: 159 GKMPTMRQTNGLSGFTKRGESEHDCFGTGHSSTTISAGLGMAVGRDLKGKNNNVVAVIGD 218

Query: 224 GTTMAGQAYEAMSNAGYLDSNMIVILNDSRH-SLHPKIEESPKTSINALSSTLSRIQSSK 282
           G   AGQAYEAM+NAGYLDS+MIVILND++  SL     + P   + ALSS LSR+QS+ 
Sbjct: 219 GAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPSPPVGALSSALSRLQSNP 278

Query: 283 SFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIE 342
           + R+LREVAKGMTK+IG  MH+ AAKVD YARGMI   GS+LFEELGLYYIGPVDGHNI+
Sbjct: 279 ALRELREVAKGMTKQIGGPMHQLAAKVDVYARGMISGTGSSLFEELGLYYIGPVDGHNID 338

Query: 343 DLISVLQEVASLGSMGPVLVHVVTEENR------RAEDTQKSEAIEKQQEGASDSNSLPF 396
           DL+++L+EV S  + GPVL+HVVTE+ R      RA+D  K   + K     +       
Sbjct: 339 DLVAILKEVKSTRTTGPVLIHVVTEKGRGYPYAERADD--KYHGVVKFDP--ATGRQFKT 394

Query: 397 GNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAV 456
            N +++Y   F EALV EAE DKD+V +HA M     L LFQ +FP R FDVG+AEQHAV
Sbjct: 395 TNETQSYTTYFAEALVAEAEVDKDVVAIHAAMGGGTGLNLFQRRFPTRCFDVGIAEQHAV 454

Query: 457 TFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGA 516
           TF+AGLAC GLKPFC I S+F+QRAYDQVV+DVD Q+LPVRF +  AGLVG+DGPT CGA
Sbjct: 455 TFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGA 514

Query: 517 FDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYPRGAIVRTDL-PGYRGIP 575
           FD+TFM+CLPNMIVMAPSDE +L +MVAT  +IDDRP CFRYPRG  +   L PG +G+P
Sbjct: 515 FDVTFMACLPNMIVMAPSDEADLFNMVATAVAIDDRPSCFRYPRGNGIGVALPPGNKGVP 574

Query: 576 IEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVREL 635
           IEIGKG++L EG+ VALLGYG+ VQ+CL A  +L + G++VTVADARFCKPLD  L+R L
Sbjct: 575 IEIGKGRILKEGERVALLGYGSAVQSCLGAAVMLEERGLNVTVADARFCKPLDRALIRSL 634

Query: 636 CQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALA 695
            ++H  LITVEEGSIGGFGSHV  F+ALDGLLD  +KWRP+VLPD YI+H +P  QLA A
Sbjct: 635 AKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGKLKWRPMVLPDRYIDHGAPADQLAEA 694

Query: 696 GLTGHHIAATALSLLGRTREALL 718
           GL   HIAATAL+L+G  REAL 
Sbjct: 695 GLMPSHIAATALNLIGAPREALF 717


>gi|2894445|emb|CAA74713.1| transketolase [Arabidopsis thaliana]
          Length = 739

 Score =  814 bits (2102), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 404/683 (59%), Positives = 512/683 (74%), Gaps = 17/683 (2%)

Query: 45  LCPSSSSITSSKLVTVSRICA-LPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLA 103
           L P+++S ++ +    +++CA L +  +++ ++ PTP+LD +  P+ +K+L++KELKQL+
Sbjct: 65  LKPNNNSHSNRR----AKVCASLAEKGEYYSNRPPTPLLDTINYPIHMKNLSVKELKQLS 120

Query: 104 VEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRR 163
            E+RS++   VSKT   L SSL  VELTVALH++F+ P DKILWDVG Q+Y HKILTGRR
Sbjct: 121 DELRSDVIFNVSKTGGHLGSSLGVVELTVALHYIFNTPQDKILWDVGHQSYPHKILTGRR 180

Query: 164 SLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISN 223
             + T+R+ +G+SG+T R ESE+D F  GH   ++SAGLGMA+ RD+KGK   +V VI +
Sbjct: 181 GKMPTMRQTNGLSGFTKRGESEHDCFGTGHSSTTISAGLGMAIGRDLKGKNNNVVAVIGD 240

Query: 224 GTTMAGQAYEAMSNAGYLDSNMIVILNDSRH-SLHPKIEESPKTSINALSSTLSRIQSSK 282
           G   AGQAYEAM+NAGYLDS+MIVILND++  SL     + P   + ALSS LSR+QS+ 
Sbjct: 241 GAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPSPPVGALSSALSRLQSNP 300

Query: 283 SFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIE 342
           + R+LREVAKGMTK+IG  MH+ AAKVD YARGMI   GS+LFEELGLYYIGPVDGHNI+
Sbjct: 301 ALRELREVAKGMTKQIGGPMHQVAAKVDVYARGMISGTGSSLFEELGLYYIGPVDGHNID 360

Query: 343 DLISVLQEVASLGSMGPVLVHVVTEENR------RAEDTQKSEAIEKQQEGASDSNSLPF 396
           DL+++L+EV S  + GPVL+HVVTE+ R      RA+D  K   + K     +       
Sbjct: 361 DLVAILKEVKSTRTTGPVLIHVVTEKGRGYPYAERADD--KYHGVVKFDP--ATGRQFKT 416

Query: 397 GNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAV 456
            N +++Y   F EALV EAE DKD+V +HA M     L LFQ +FP R FDVG+AEQHAV
Sbjct: 417 TNETQSYTTYFAEALVAEAEVDKDVVAIHAAMGGGTGLNLFQRRFPTRCFDVGIAEQHAV 476

Query: 457 TFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGA 516
           TF+AGLAC GLKPFC I S+F+QRAYDQVV+DVD Q+LPVRF +  AGLVG+DGPT CGA
Sbjct: 477 TFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGA 536

Query: 517 FDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYPRGAIVRTDL-PGYRGIP 575
           FD+TFM+CLPNMIVMAPSDE +L +MVAT  +IDDRP CFRYPRG  +   L PG +G+P
Sbjct: 537 FDVTFMACLPNMIVMAPSDEADLFNMVATAVAIDDRPSCFRYPRGNGIGVALPPGNKGVP 596

Query: 576 IEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVREL 635
           IEIGKG++L EG+ VALLGYG+ VQ+CL A  +L + G++VTVADARFCKPLD  L+R L
Sbjct: 597 IEIGKGRILKEGERVALLGYGSAVQSCLGAAVMLEERGLNVTVADARFCKPLDRALIRSL 656

Query: 636 CQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALA 695
            ++H  LITVEEGSIGGFGSHV  F+ALDGLLD  +KWRP+VLPD YI+H +P  QLA A
Sbjct: 657 AKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGKLKWRPMVLPDRYIDHGAPADQLAEA 716

Query: 696 GLTGHHIAATALSLLGRTREALL 718
           GL   HIAATAL+L+G  REAL 
Sbjct: 717 GLMPSHIAATALNLIGAPREALF 739


>gi|193792541|gb|ACF21004.1| 1-deoxy-D-xylulose 5-phosphate synthase [Salvia miltiorrhiza]
          Length = 714

 Score =  813 bits (2100), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 401/667 (60%), Positives = 499/667 (74%), Gaps = 13/667 (1%)

Query: 63  ICA-LPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSL 121
           ICA L +  ++F  K PTP+LD +  P+ +K+L+ KEL+QLA E+RS++   VSKT   L
Sbjct: 51  ICATLSERGEYFSQKPPTPLLDTINYPIHMKNLSTKELQQLADELRSDVIFNVSKTGGHL 110

Query: 122 KSSLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSR 181
            SSL  +ELTVALH+VF+AP D+ILWDVG Q Y HKILTGRR  + +LR+  G+SG+T R
Sbjct: 111 GSSLGVIELTVALHYVFNAPQDRILWDVGHQAYPHKILTGRRDRMPSLRQTGGLSGFTKR 170

Query: 182 SESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL 241
           SES+YD F AGH   ++SAGLGMAV RD+KG+++ +V VI +G   AGQAYEAM+NAGYL
Sbjct: 171 SESDYDCFGAGHSSTTISAGLGMAVGRDLKGRKDNVVAVIGDGAMTAGQAYEAMNNAGYL 230

Query: 242 DSNMIVILNDSRHSLHPKIE-ESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGR 300
           DS+MIVILND++    P    + P   + ALSS LSR+QS++  R+LREVAKG+TK+IG 
Sbjct: 231 DSDMIVILNDNKQVSLPTANLDGPTAPVGALSSALSRLQSNRPLRELREVAKGVTKQIGG 290

Query: 301 GMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPV 360
            MHE AAKVDEYARG+I   GSTLFEELGLYYIGPVDGHN++DL ++ +EV S  + GPV
Sbjct: 291 PMHELAAKVDEYARGLISGSGSTLFEELGLYYIGPVDGHNLDDLTAIHREVKSTKTTGPV 350

Query: 361 LVHVVTEENR------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVME 414
           L+HVVTE+ R      +A D            G    +S P    ++ Y   F EAL+ E
Sbjct: 351 LIHVVTEKGRGYPYAEKAADKYHGVTKFDPATGKQFKSSAP----TQPYTTYFAEALIAE 406

Query: 415 AEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIP 474
           AE DKDIV +HA M     L LFQ +FP R FDVG+AEQHAVTF+AGLAC G+KPFC I 
Sbjct: 407 AEVDKDIVAIHAAMGGGTGLNLFQRRFPTRCFDVGIAEQHAVTFAAGLACEGIKPFCAIY 466

Query: 475 SAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPS 534
           S+FLQR YDQVV+DVD Q+LPVRF +  AGLVG+DGPT CGAFD+TFM+CLPNM+VMAPS
Sbjct: 467 SSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMACLPNMVVMAPS 526

Query: 535 DEDELVDMVATVASIDDRPVCFRYPRGAIVRTDL-PGYRGIPIEIGKGKVLVEGKDVALL 593
           DE EL +MVAT A+IDDRP CFRYPRG  +  +L PG +G P+EIGKG++L+EG+ VALL
Sbjct: 527 DEAELFNMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGKPLEIGKGRILIEGERVALL 586

Query: 594 GYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGF 653
           GYG+ VQ+CL A AL+   G+ +TVADARFC PLD  L+R L ++H  LITVEEGSIGGF
Sbjct: 587 GYGSAVQSCLAAAALVETRGLQLTVADARFCMPLDHALIRSLAKSHEVLITVEEGSIGGF 646

Query: 654 GSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRT 713
           GSHV+HF+ALDGLLD  +KWRP+VLPD YI+H +P  QL  AGLT  HIAAT  ++LG+ 
Sbjct: 647 GSHVAHFMALDGLLDGNLKWRPLVLPDRYIDHGAPVDQLMEAGLTPSHIAATVFNILGKA 706

Query: 714 REALLLM 720
           REAL +M
Sbjct: 707 REALEIM 713


>gi|256619604|emb|CAZ66648.1| 1-deoxy-D-xylulose 5-phosphate synthase 1 precursor [Solanum
           lycopersicum]
          Length = 719

 Score =  813 bits (2100), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 409/665 (61%), Positives = 499/665 (75%), Gaps = 12/665 (1%)

Query: 64  CALPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKS 123
            +L +  +++  + PTPILD V  P+ +K+L++KELKQLA E+RS+    VSKT   L S
Sbjct: 58  ASLSESGEYYTQRPPTPILDTVNYPIHMKNLSLKELKQLADELRSDTIFNVSKTGGHLGS 117

Query: 124 SLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSE 183
           SL  VELTVALH+VF+AP D+ILWDVG Q+Y HKILTGRR  + TLR+ DG++G+T RSE
Sbjct: 118 SLGVVELTVALHYVFNAPQDRILWDVGHQSYPHKILTGRRDKMSTLRQTDGLAGFTKRSE 177

Query: 184 SEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDS 243
           SEYD F  GH   ++SAGLGMAV RD+KG+   ++ VI +G   AGQAYEAM+NAGYLDS
Sbjct: 178 SEYDCFGTGHSSTTISAGLGMAVGRDLKGRNNNVIAVIGDGAMTAGQAYEAMNNAGYLDS 237

Query: 244 NMIVILNDSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGM 302
           +MIVILND+R  SL     + P   + ALSS LSR+QS++  R+LREVAKG+TK+IG  M
Sbjct: 238 DMIVILNDNRQVSLPTATLDGPVAPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPM 297

Query: 303 HEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLV 362
           HE AAKVDEYARGMI   GSTLFEELGLYYIGPVDGHNI+DLI++L+EV S  + GPVL+
Sbjct: 298 HELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDLIAILKEVRSTKTTGPVLI 357

Query: 363 HVVTEENR------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAE 416
           HVVTE+ R      RA D     A      G     S      +++Y   F EAL+ EAE
Sbjct: 358 HVVTEKGRGYPYAERAADKYHGVAKFDPATGKQFKASAK----TQSYTTYFAEALIAEAE 413

Query: 417 KDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSA 476
            DKDIV +HA M     + LF  +FP R FDVG+AEQHAVTF+AGLAC G+KPFC I S+
Sbjct: 414 ADKDIVAIHAAMGGGTGMNLFHRRFPTRCFDVGIAEQHAVTFAAGLACEGIKPFCAIYSS 473

Query: 477 FLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDE 536
           F+QRAYDQVV+DVD Q+LPVRF +  AGLVG+DGPT CGAFD+T+M+CLPNM+VMAPSDE
Sbjct: 474 FMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTYMACLPNMVVMAPSDE 533

Query: 537 DELVDMVATVASIDDRPVCFRYPRGAIVRTDLP-GYRGIPIEIGKGKVLVEGKDVALLGY 595
            EL  MVAT A+IDDRP CFRYPRG  +  +LP G +GIP+E+GKG++L+EG+ VALLGY
Sbjct: 534 AELFHMVATAAAIDDRPSCFRYPRGNGIGVELPAGNKGIPLEVGKGRILIEGERVALLGY 593

Query: 596 GAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGS 655
           G+ VQNCL A  +L   G+ VTVADARFCKPLD  L+R L ++H  LITVEEGSIGGFGS
Sbjct: 594 GSAVQNCLDAAIVLESRGLQVTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGS 653

Query: 656 HVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTRE 715
           HV  F+ALDGLLD  +KWRPIVLPD YI+H SP  QLA AGLT  HIAAT  ++LG+TRE
Sbjct: 654 HVVQFMALDGLLDGKLKWRPIVLPDRYIDHGSPVDQLAEAGLTPSHIAATVFNILGQTRE 713

Query: 716 ALLLM 720
           AL +M
Sbjct: 714 ALEVM 718


>gi|350539507|ref|NP_001234672.1| 1-D-deoxyxylulose 5-phosphate synthase [Solanum lycopersicum]
 gi|5059160|gb|AAD38941.1|AF143812_1 1-D-deoxyxylulose 5-phosphate synthase [Solanum lycopersicum]
          Length = 719

 Score =  813 bits (2099), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 409/665 (61%), Positives = 499/665 (75%), Gaps = 12/665 (1%)

Query: 64  CALPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKS 123
            +L +  +++  + PTPILD V  P+ +K+L++KELKQLA E+RS+    VSKT   L S
Sbjct: 58  ASLSESGEYYTQRPPTPILDTVNYPIHMKNLSLKELKQLADELRSDTIFNVSKTGGHLGS 117

Query: 124 SLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSE 183
           SL  VELTVALH+VF+AP D+ILWDVG Q+Y HKILTGRR  + TLR+ DG++G+T RSE
Sbjct: 118 SLGVVELTVALHYVFNAPQDRILWDVGHQSYPHKILTGRRDKMSTLRQTDGLAGFTKRSE 177

Query: 184 SEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDS 243
           SEYD F  GH   ++SAGLGMAV RD+KG+   ++ VI +G   AGQAYEAM+NAGYLDS
Sbjct: 178 SEYDCFGTGHSSTTISAGLGMAVGRDLKGRNNNVIAVIGDGAMTAGQAYEAMNNAGYLDS 237

Query: 244 NMIVILNDSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGM 302
           +MIVILND+R  SL     + P   + ALSS LSR+QS++  R+LREVAKG+TK+IG  M
Sbjct: 238 DMIVILNDNRQVSLPTATLDGPVAPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPM 297

Query: 303 HEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLV 362
           HE AAKVDEYARGMI   GSTLFEELGLYYIGPVDGHNI+DLI++L+EV S  + GPVL+
Sbjct: 298 HELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDLIAILKEVRSTKTTGPVLI 357

Query: 363 HVVTEENR------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAE 416
           HVVTE+ R      RA D     A      G     S      +++Y   F EAL+ EAE
Sbjct: 358 HVVTEKGRGYPYAERAADKYHGVAKFDPATGKQFKASAK----TQSYTTYFAEALIAEAE 413

Query: 417 KDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSA 476
            DKDIV +HA M     + LF  +FP R FDVG+AEQHAVTF+AGLAC G+KPFC I S+
Sbjct: 414 ADKDIVAIHAAMGGGTGMNLFHRRFPTRCFDVGIAEQHAVTFAAGLACEGIKPFCAIYSS 473

Query: 477 FLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDE 536
           F+QRAYDQVV+DVD Q+LPVRF +  AGLVG+DGPT CGAFD+T+M+CLPNM+VMAPSDE
Sbjct: 474 FMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTYMACLPNMVVMAPSDE 533

Query: 537 DELVDMVATVASIDDRPVCFRYPRGAIVRTDLP-GYRGIPIEIGKGKVLVEGKDVALLGY 595
            EL  MVAT A+IDDRP CFRYPRG  +  +LP G +GIP+E+GKG++L+EG+ VALLGY
Sbjct: 534 AELFHMVATAAAIDDRPSCFRYPRGNGIGVELPAGNKGIPLEVGKGRILIEGERVALLGY 593

Query: 596 GAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGS 655
           G+ VQNCL A  +L   G+ VTVADARFCKPLD  L+R L ++H  LITVEEGSIGGFGS
Sbjct: 594 GSAVQNCLDAAIVLESRGLQVTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGS 653

Query: 656 HVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTRE 715
           HV  F+ALDGLLD  +KWRPIVLPD YI+H SP  QLA AGLT  HIAAT  ++LG+TRE
Sbjct: 654 HVVQFMALDGLLDGKLKWRPIVLPDRYIDHGSPVDQLAEAGLTPSHIAATVFNILGQTRE 713

Query: 716 ALLLM 720
           AL +M
Sbjct: 714 ALEVM 718


>gi|386081792|gb|AFI98878.1| chloroplast 1-deoxy-D-xylulose-5-phosphate synthase [Withania
           somnifera]
 gi|386082787|gb|AFI98880.1| chloroplast 1-deoxy-D-xylulose-5-phosphate synthase [Withania
           somnifera]
          Length = 717

 Score =  812 bits (2098), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 412/670 (61%), Positives = 502/670 (74%), Gaps = 22/670 (3%)

Query: 64  CALPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKS 123
            +L +  +++  + PTPILD +  P+ +K+L++KELKQLA E+RS+    VSKT   L S
Sbjct: 56  ASLSETGEYYTQRPPTPILDTINYPIHMKNLSLKELKQLAEELRSDTIFNVSKTGGHLGS 115

Query: 124 SLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSE 183
           SL  VELTVALH+VF+AP D+ILWDVG Q+Y HKILTGRR  + TLR+ +G++G+T RSE
Sbjct: 116 SLGVVELTVALHYVFNAPQDRILWDVGHQSYPHKILTGRREKMSTLRQTNGLAGFTKRSE 175

Query: 184 SEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDS 243
           SEYD F  GH   ++SAGLGMAV RD+KG+   ++ VI +G   AGQAYEAM+NAGYLDS
Sbjct: 176 SEYDCFGTGHSSTTISAGLGMAVGRDLKGRNNNVIAVIGDGAMTAGQAYEAMNNAGYLDS 235

Query: 244 NMIVILNDSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGM 302
           +MIVILND+R  SL     + P   + ALSS LSR+QS++  R+LREVAKG+TK+IG  M
Sbjct: 236 DMIVILNDNRQVSLPTATLDGPVPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPM 295

Query: 303 HEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLV 362
           HE AAKVDEYARGMI   GSTLFEELGLYYIGPVDGHNI+DLIS+L+EV S  + GPVL+
Sbjct: 296 HELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDLISILKEVKSTKTTGPVLI 355

Query: 363 HVVTEENR------RAED-----TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEAL 411
           HVVTE+ R      RA D      +   A  KQ +G + + S         Y   F EAL
Sbjct: 356 HVVTEKGRGYPYAERAADKYHGVAKFDPATGKQFKGIAKTQS---------YTTYFAEAL 406

Query: 412 VMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFC 471
           + EAE +KDIV +HA M     + LF  +FP R FDVG+AEQHAVTF+AGLAC GLKPFC
Sbjct: 407 IAEAEANKDIVAIHAAMGGGTGMNLFLGRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFC 466

Query: 472 IIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVM 531
            I S+F+QRAYDQVV+DVD Q+LPVRF +  AGLVG+DGPT CGAFD+TFM+CLPNM+VM
Sbjct: 467 AIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMACLPNMVVM 526

Query: 532 APSDEDELVDMVATVASIDDRPVCFRYPRGAIVRTDLP-GYRGIPIEIGKGKVLVEGKDV 590
           APSDE EL  MVAT A+IDDRP CFRYPRG  +  +LP G RG P+E+GKG++LVEG+ V
Sbjct: 527 APSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPAGNRGTPLEVGKGRILVEGERV 586

Query: 591 ALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI 650
           ALLGYG+ VQNCL A A+L    + VTVADARFCKPLD  L+R L ++H  LITVEEGSI
Sbjct: 587 ALLGYGSAVQNCLAASAVLESHCLQVTVADARFCKPLDRALIRSLAKSHEVLITVEEGSI 646

Query: 651 GGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
           GGFGSHV+ F+ALDGLLD  +KWRPIVLPD YI+H SP  QLA AGLT  HIAAT  ++L
Sbjct: 647 GGFGSHVAQFMALDGLLDGKLKWRPIVLPDRYIDHGSPADQLAEAGLTPSHIAATVFNIL 706

Query: 711 GRTREALLLM 720
           G+TREAL +M
Sbjct: 707 GQTREALEVM 716


>gi|30144404|gb|AAP14353.1| 1-deoxy-D-xylulose-5-phosphate synthase [Andrographis paniculata]
          Length = 691

 Score =  812 bits (2098), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 396/666 (59%), Positives = 498/666 (74%), Gaps = 12/666 (1%)

Query: 63  ICALPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLK 122
             +L +  ++F +K PTP+LD ++ P+ +K+L+ KELKQLA E RS++   VSKT   L 
Sbjct: 29  FASLAERGEYFSEKPPTPLLDTIDYPIHMKNLSTKELKQLADEPRSDVIFNVSKTGGHLG 88

Query: 123 SSLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRS 182
           SSL  +ELTVA+H+VF+AP D+ILWDVG Q+Y HKILTGRR+++ TLR+ DG+ G+T RS
Sbjct: 89  SSLGVIELTVAIHYVFNAPQDRILWDVGHQSYPHKILTGRRNMMPTLRQTDGLCGFTKRS 148

Query: 183 ESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLD 242
           ES YD F AGH   ++SAGLGMAV RD++G++  +V VI +G  +AGQAYEAM+NAGYLD
Sbjct: 149 ESNYDCFGAGHSSTTISAGLGMAVGRDLQGRKNHVVAVIGDGAMIAGQAYEAMNNAGYLD 208

Query: 243 SNMIVILNDSRHSLHPKIE-ESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRG 301
           S+MIVILND++    P    + P   + ALSS LSR+QS++  R+LREVAKG+TK+IG  
Sbjct: 209 SDMIVILNDNKQVSLPTANLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGS 268

Query: 302 MHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVL 361
           MHE AAKVDEYARG+I   GSTLFEELGLYYIGPVDGHNI+DL ++L+EV S  + GPV 
Sbjct: 269 MHELAAKVDEYARGLISGSGSTLFEELGLYYIGPVDGHNIDDLTAILKEVKSTKTTGPVS 328

Query: 362 VHVVTEENR------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEA 415
           +HVVTE+ R      +A D     A      G    +S P    ++ Y   F EAL+ EA
Sbjct: 329 IHVVTEKGRGYSYAEKAADKYHGVAKFDPATGKQFKSSTP----TQAYTTYFAEALIAEA 384

Query: 416 EKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPS 475
           E+D  IV +HA M     L LF  +FP R FDVG+AEQHAVTF+AGLAC GLKPFC I S
Sbjct: 385 EQDNIIVAIHAAMGGGTGLNLFDRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYS 444

Query: 476 AFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSD 535
           +FLQRAYDQVV+DVD Q+LPVRF +  AGLVG+DGPT CGAFDIT+M+CLPNM+VMAP+D
Sbjct: 445 SFLQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITYMACLPNMVVMAPAD 504

Query: 536 EDELVDMVATVASIDDRPVCFRYPRGAIVRTDL-PGYRGIPIEIGKGKVLVEGKDVALLG 594
           E EL  MVAT A+IDDRP CFRYPRG  +  +L PG +GIP+EIGKG++L+EG+ VALLG
Sbjct: 505 EAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEIGKGRILLEGERVALLG 564

Query: 595 YGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFG 654
           YG  VQ+C+ A AL+   G+ +TVADARFCKPLD  L+R L  +H  LITVEEG++GGF 
Sbjct: 565 YGTAVQSCMTAAALMEPHGLQLTVADARFCKPLDQGLIRRLANSHEVLITVEEGAVGGFA 624

Query: 655 SHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTR 714
           +HV+ F+ALDGLLD  +KWRP+VLPD YI+H SP  QL  AGLT HHIAAT  ++LG+ R
Sbjct: 625 AHVAQFMALDGLLDGKLKWRPLVLPDRYIDHGSPADQLMEAGLTSHHIAATVFNILGKAR 684

Query: 715 EALLLM 720
           EAL +M
Sbjct: 685 EALQIM 690


>gi|30315812|sp|O78328.1|DXS_CAPAN RecName: Full=Probable 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic; Short=1-deoxyxylulose-5-phosphate
           synthase; Short=DXP synthase; Short=DXPS; AltName:
           Full=CapTKT2; Flags: Precursor
 gi|3559816|emb|CAA75778.1| transketolase 2 [Capsicum annuum]
          Length = 719

 Score =  811 bits (2096), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 409/670 (61%), Positives = 504/670 (75%), Gaps = 22/670 (3%)

Query: 64  CALPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKS 123
            +L +  +++  + PTPI+D +  P+ +K+L++KELKQLA E+RS+    VSKT   L S
Sbjct: 58  ASLSESGEYYTQRPPTPIVDTINYPIHMKNLSLKELKQLADELRSDTIFNVSKTGGHLGS 117

Query: 124 SLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSE 183
           SL  VELTVALH+VF+AP D+ILWDVG Q+Y HKILTGRR  + TLR+ +G++G+T RSE
Sbjct: 118 SLGVVELTVALHYVFNAPQDRILWDVGHQSYPHKILTGRREKMSTLRQTNGLAGFTKRSE 177

Query: 184 SEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDS 243
           SEYD F  GH   ++SAGLGMAV RD+KG+   ++ VI +G   AGQAYEAM+NAGYLDS
Sbjct: 178 SEYDCFGTGHSSTTISAGLGMAVGRDLKGRNNNVIAVIGDGAMTAGQAYEAMNNAGYLDS 237

Query: 244 NMIVILNDSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGM 302
           +MIVILND+R  SL     + P   + ALSS LSR+QS++  R+LREVAKG+TK+IG  M
Sbjct: 238 DMIVILNDNRQVSLPTATLDGPVPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPM 297

Query: 303 HEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLV 362
           HE AAKVDEYARGMI   GSTLFEELGLYYIGPVDGHNI+DLIS+L+EV S  + GPVL+
Sbjct: 298 HELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDLISILKEVRSTKTTGPVLI 357

Query: 363 HVVTEENR------RAED-----TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEAL 411
           HVVTE+ R      RA D      +   A  KQ +G++ + S         Y   F EAL
Sbjct: 358 HVVTEKGRGYPYAERAADKYHGVAKFDPATGKQFKGSAKTQS---------YTTYFAEAL 408

Query: 412 VMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFC 471
           + EAE DKDIV +HA M     + LF  +FP R FDVG+AEQHAVTF+AGLAC GLKPFC
Sbjct: 409 IAEAEADKDIVAIHAAMGGGTGMNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFC 468

Query: 472 IIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVM 531
            I S+F+QRAYDQVV+DVD Q+LPVRF +  AGLVG+DGPT CGAFD+TFM+CLPNM+VM
Sbjct: 469 AIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMACLPNMVVM 528

Query: 532 APSDEDELVDMVATVASIDDRPVCFRYPRGAIVRTDLP-GYRGIPIEIGKGKVLVEGKDV 590
           APSDE EL  +VAT A+IDDRP CFRYPRG  +  +LP G +GIP+E+GKG++LVEG+ V
Sbjct: 529 APSDEAELFHIVATAAAIDDRPSCFRYPRGNGIGVELPAGNKGIPLEVGKGRILVEGERV 588

Query: 591 ALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI 650
           ALLGYG+ VQNCL A ++L   G+ VTVADARFCKPLD  L+R L ++H  L+TVE+GSI
Sbjct: 589 ALLGYGSAVQNCLAAASVLESRGLQVTVADARFCKPLDRALIRSLAKSHEVLVTVEKGSI 648

Query: 651 GGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
           GGFGSHV  F+ALDGLLD  +KWRPIVLPD YI+H SP  QLA AGLT  HIAAT  ++L
Sbjct: 649 GGFGSHVVQFMALDGLLDGKLKWRPIVLPDRYIDHGSPADQLAEAGLTPSHIAATVFNIL 708

Query: 711 GRTREALLLM 720
           G+TREAL +M
Sbjct: 709 GQTREALEVM 718


>gi|302805853|ref|XP_002984677.1| hypothetical protein SELMODRAFT_268893 [Selaginella moellendorffii]
 gi|300147659|gb|EFJ14322.1| hypothetical protein SELMODRAFT_268893 [Selaginella moellendorffii]
          Length = 636

 Score =  811 bits (2095), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 398/643 (61%), Positives = 490/643 (76%), Gaps = 22/643 (3%)

Query: 91  LKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDKILWDVG 150
           +K+L+ K+L+QLA E+RS++   VSKT   L +SL  +ELTVALHHVF+ P DKILWDVG
Sbjct: 1   MKNLSTKDLRQLADELRSDIIFTVSKTGGHLGASLGVIELTVALHHVFNMPEDKILWDVG 60

Query: 151 EQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDI 210
            Q Y HKILTGRRS +HTLR+ +G+SG+T RSESEYD F AGH   S+SAGLGMAVARD+
Sbjct: 61  HQAYPHKILTGRRSRMHTLRQTNGLSGFTKRSESEYDSFGAGHSSTSISAGLGMAVARDL 120

Query: 211 KGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH-SLHPKIEESPKTSIN 269
            G +  +++VI +G   AGQAYEAM+NAGYLDSNMIVILND++  SL     + P   + 
Sbjct: 121 MGNKNHVISVIGDGAMTAGQAYEAMNNAGYLDSNMIVILNDNKQVSLPTATLDGPAPPVG 180

Query: 270 ALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEELG 329
           ALSS LS++QSS+  R+LREVAKG+TK++G  MHE AAKVDEYARGMI   GSTLFEELG
Sbjct: 181 ALSSALSKLQSSRPLRELREVAKGVTKQLGGPMHELAAKVDEYARGMISGSGSTLFEELG 240

Query: 330 LYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR------RAED-----TQKS 378
           LYYIGPVDGH+IEDL+++L+EV +  + GPVL+H+VTE+ R      RA D      +  
Sbjct: 241 LYYIGPVDGHSIEDLVTILKEVKNTRTTGPVLIHIVTEKGRGYPYAERASDKYHGVVKFD 300

Query: 379 EAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQ 438
            A  KQ +G + + +         Y   F EAL+ EAE D  I+ +HA M     L +FQ
Sbjct: 301 PATGKQFKGKTATQA---------YTTYFAEALIAEAEVDNGIIAIHAAMGGGTGLNMFQ 351

Query: 439 EKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRF 498
           ++FP+R FDVG+AEQHAVTF+AGLAC GLKPFC I S+FLQRAYDQVV+DVD Q+LPVRF
Sbjct: 352 KRFPDRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFLQRAYDQVVHDVDLQKLPVRF 411

Query: 499 VITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRY 558
            +  AGLVG+DGPT CGAFD+T+M+CLPNM+VMAPSDE EL  MVAT A+IDDRP CFRY
Sbjct: 412 AMDRAGLVGADGPTHCGAFDVTYMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRY 471

Query: 559 PRGAIVRTDL-PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVT 617
           PRG  +   L PG +GIP+E+GKG++LVEG  VALLGYG MVQ+CL A+ALL+  G+  T
Sbjct: 472 PRGNGIGVVLPPGNKGIPLEVGKGRILVEGSKVALLGYGTMVQSCLAAQALLASCGLPAT 531

Query: 618 VADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWRPIV 677
           VADARFCKPLD  L+R+L + H  LITVEEGSIGGFGSHV+ F+ALDGLLD  +KWRP+V
Sbjct: 532 VADARFCKPLDRDLIRQLAREHEVLITVEEGSIGGFGSHVAQFMALDGLLDGTLKWRPLV 591

Query: 678 LPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLLM 720
           LPD YI+H SP  Q+  AGLT  HIAATAL ++GRTR+AL +M
Sbjct: 592 LPDRYIDHGSPNDQMTEAGLTAAHIAATALDIMGRTRDALEIM 634


>gi|91771913|gb|ABE60813.1| CLA1-like protein [Brassica rapa]
          Length = 716

 Score =  811 bits (2094), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 398/662 (60%), Positives = 499/662 (75%), Gaps = 12/662 (1%)

Query: 64  CALPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKS 123
            +L +  +++ ++ PTP+LD +  P+ +K+L+ KELKQL+ E+RS++   VSKT   L S
Sbjct: 58  ASLAEKGEYYSNRPPTPLLDTINYPIHMKNLSTKELKQLSDELRSDVIFNVSKTGGHLGS 117

Query: 124 SLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSE 183
           SL  VELTVALH++F+ P DKILWDVG Q+Y HKILTGRR  + T+R+ +G+SG+T R E
Sbjct: 118 SLGVVELTVALHYIFNTPQDKILWDVGHQSYPHKILTGRRGKMPTMRQTNGLSGFTKRGE 177

Query: 184 SEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDS 243
           SE+D F  GH   ++SAGL MAV RD+KGK   +V VI +G   AGQAYEAM+NAGYLDS
Sbjct: 178 SEHDCFGTGHSSTTISAGLRMAVGRDLKGKNNNVVAVIGDGAMTAGQAYEAMNNAGYLDS 237

Query: 244 NMIVILNDSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGM 302
           +MIVILND++  SL     + P   + ALSS LSR+QS+ + R+LREVAKG+TK+IG  M
Sbjct: 238 DMIVILNDNKQVSLPTATLDGPSPPVGALSSALSRLQSNPALRELREVAKGVTKQIGGPM 297

Query: 303 HEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLV 362
           H+ AAKVDEYARGMI   GSTLFEELGLYYIGPVDGHNI+DL+++L+EV S  + GPVL+
Sbjct: 298 HQLAAKVDEYARGMISGTGSTLFEELGLYYIGPVDGHNIDDLVAILKEVKSARTTGPVLI 357

Query: 363 HVVTEENR------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAE 416
           HV+TE+ R      RA+D  K   + K     +        N +++Y   F EALV EAE
Sbjct: 358 HVITEKGRGYPYAERADD--KYHGVVKFDP--ATGKQFKTTNKTQSYTTYFAEALVAEAE 413

Query: 417 KDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSA 476
            DKD+V +HA M     L LFQ +FP R FDVG+AEQHAVTF+AGLAC GLKPFC I S+
Sbjct: 414 VDKDVVAIHAAMGGGTGLNLFQRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSS 473

Query: 477 FLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDE 536
           F+QRAYDQVV+DVD Q+LPVRF +  AGLVG+DGPT CGAFD+TFM+CLPNMIVMAPSDE
Sbjct: 474 FMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMACLPNMIVMAPSDE 533

Query: 537 DELVDMVATVASIDDRPVCFRYPRGAIVRTDL-PGYRGIPIEIGKGKVLVEGKDVALLGY 595
            EL ++VAT A+IDDRP CFRYPRG  +   L PG +G+P+E+GKG++L EG+ VALLGY
Sbjct: 534 AELFNIVATAAAIDDRPSCFRYPRGNGIGVALPPGNKGVPVEVGKGRILKEGERVALLGY 593

Query: 596 GAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGS 655
           G+ VQ+CL A  +L + G++VTVADARFCKPLD  L+R L ++H  LITVEEGSIGGFGS
Sbjct: 594 GSAVQSCLGAAVMLQERGLNVTVADARFCKPLDRALIRSLAKSHEVLITVEEGSIGGFGS 653

Query: 656 HVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTRE 715
           HV  F+ALDGLLD  +KWRP+VLPD YI+H SP  Q+A AGL   HIAATAL+L+G  RE
Sbjct: 654 HVVQFLALDGLLDGKLKWRPMVLPDRYIDHGSPADQMAEAGLMPSHIAATALNLIGAPRE 713

Query: 716 AL 717
           AL
Sbjct: 714 AL 715


>gi|302793999|ref|XP_002978764.1| hypothetical protein SELMODRAFT_268187 [Selaginella moellendorffii]
 gi|300153573|gb|EFJ20211.1| hypothetical protein SELMODRAFT_268187 [Selaginella moellendorffii]
          Length = 636

 Score =  810 bits (2093), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 397/643 (61%), Positives = 490/643 (76%), Gaps = 22/643 (3%)

Query: 91  LKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDKILWDVG 150
           +K+L+ K+L+QLA E+RS++   VSKT   L +SL  +ELTVALHHVF+ P DKILWDVG
Sbjct: 1   MKNLSTKDLRQLADELRSDIIFTVSKTGGHLGASLGVIELTVALHHVFNMPEDKILWDVG 60

Query: 151 EQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDI 210
            Q Y HKILTGRRS +HT+R+ +G+SG+T RSESEYD F AGH   S+SAGLGMAVARD+
Sbjct: 61  HQAYPHKILTGRRSRMHTMRQTNGLSGFTKRSESEYDSFGAGHSSTSISAGLGMAVARDL 120

Query: 211 KGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH-SLHPKIEESPKTSIN 269
            G +  +++VI +G   AGQAYEAM+NAGYLDSNMIVILND++  SL     + P   + 
Sbjct: 121 MGNKNHVISVIGDGAMTAGQAYEAMNNAGYLDSNMIVILNDNKQVSLPTATLDGPAPPVG 180

Query: 270 ALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEELG 329
           ALSS LS++QSS+  R+LREVAKG+TK++G  MHE AAKVDEYARGMI   GSTLFEELG
Sbjct: 181 ALSSALSKLQSSRPLRELREVAKGVTKQLGGQMHELAAKVDEYARGMISGSGSTLFEELG 240

Query: 330 LYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR------RAED-----TQKS 378
           LYYIGPVDGH+IEDL+++L+EV +  + GPVL+H+VTE+ R      RA D      +  
Sbjct: 241 LYYIGPVDGHSIEDLVTILKEVKNTRTTGPVLIHIVTEKGRGYPYAERASDKYHGVVKFD 300

Query: 379 EAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQ 438
            A  KQ +G + + +         Y   F EAL+ EAE D  I+ +HA M     L +FQ
Sbjct: 301 PATGKQFKGKTATQA---------YTTYFAEALIAEAEVDNGIIAIHAAMGGGTGLNMFQ 351

Query: 439 EKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRF 498
           ++FP+R FDVG+AEQHAVTF+AGLAC GLKPFC I S+FLQRAYDQVV+DVD Q+LPVRF
Sbjct: 352 KRFPDRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFLQRAYDQVVHDVDLQKLPVRF 411

Query: 499 VITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRY 558
            +  AGLVG+DGPT CGAFD+T+M+CLPNM+VMAPSDE EL  MVAT A+IDDRP CFRY
Sbjct: 412 AMDRAGLVGADGPTHCGAFDVTYMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRY 471

Query: 559 PRGAIVRTDL-PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVT 617
           PRG  +   L PG +GIP+E+GKG++LVEG  VALLGYG MVQ+CL A+ALL+  G+  T
Sbjct: 472 PRGNGIGVVLPPGNKGIPLEVGKGRILVEGSKVALLGYGTMVQSCLAAQALLASCGLPAT 531

Query: 618 VADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWRPIV 677
           VADARFCKPLD  L+R+L + H  LITVEEGSIGGFGSHV+ F+ALDGLLD  +KWRP+V
Sbjct: 532 VADARFCKPLDRDLIRQLAREHEVLITVEEGSIGGFGSHVAQFMALDGLLDGTLKWRPLV 591

Query: 678 LPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLLM 720
           LPD YI+H SP  Q+  AGLT  HIAATAL ++GRTR+AL +M
Sbjct: 592 LPDRYIDHGSPNDQMTEAGLTAAHIAATALDIMGRTRDALEIM 634


>gi|168038235|ref|XP_001771607.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162677163|gb|EDQ63637.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 679

 Score =  810 bits (2092), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 410/679 (60%), Positives = 505/679 (74%), Gaps = 19/679 (2%)

Query: 53  TSSKLVTVSRICALPD-IDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELS 111
           T S++VT     A+PD   ++  +K PTP+LD +  P+ +K+LT++ELKQLA E+R+E  
Sbjct: 8   TKSRIVT----SAVPDQAGEYPAEKPPTPLLDTINYPIHMKNLTVRELKQLADEVRAETI 63

Query: 112 SIVSKTEKSLKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRK 171
             VSKT   L SSL  VELTVALHHVF+ P DK LWDVG Q Y HKILTGRR  +HTLR+
Sbjct: 64  HTVSKTGGHLGSSLGVVELTVALHHVFNCPEDKFLWDVGHQAYPHKILTGRRDRMHTLRQ 123

Query: 172 KDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQA 231
            DG+SG+  R+ESEYD F AGH   S+SAGLGMAV RD+KGK+  ++ VI +G   AGQA
Sbjct: 124 TDGLSGFVKRAESEYDAFGAGHSSTSISAGLGMAVGRDLKGKKNNVIAVIGDGAMTAGQA 183

Query: 232 YEAMSNAGYLDSNMIVILNDSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREV 290
           YEAM+NAGYLD NMIVILND++  SL     + P   + ALSS LSR+QSS+  R+LREV
Sbjct: 184 YEAMNNAGYLDCNMIVILNDNKQVSLPTATLDGPAPPVGALSSALSRLQSSRPLRELREV 243

Query: 291 AKGMTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQE 350
           AKG+TK++G   H  A+KVDEYARGMI   GSTLFEELGLYYIGPVDGHN++DL+++L+E
Sbjct: 244 AKGVTKQLGGPAHVLASKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNMDDLVTILRE 303

Query: 351 VASLGSMGPVLVHVVTEENR------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYD 404
           V +  + GPVL+H+VTE+ R      RA D  K   + K        N +     ++ Y 
Sbjct: 304 VKNTSTTGPVLIHLVTEKGRGYPYAERAAD--KYHGVVKFDPATGKQNKVKAA--TQAYT 359

Query: 405 DCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLAC 464
             F EAL+ EAE DKDI+ +HA M     + +F ++FPER FDVG+AEQHAVTF+AGLAC
Sbjct: 360 TYFAEALIAEAEVDKDIIGIHAAMGGGTGMNMFAKRFPERCFDVGIAEQHAVTFAAGLAC 419

Query: 465 GGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSC 524
            GLKPFC I S+FLQR YDQVV+DVD Q+LPVRF +  AGLVG+DGPT CGAFD+T+M+C
Sbjct: 420 EGLKPFCSIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTYMAC 479

Query: 525 LPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYPRGAIVRTDLP-GYRGIPIEIGKGKV 583
           LPNM+VMAP+DE EL  MVAT A IDDRP CFRYPRG  +   LP   +GIP+EIGKG++
Sbjct: 480 LPNMVVMAPADEAELFHMVATAAQIDDRPSCFRYPRGNGIGAQLPENNKGIPVEIGKGRI 539

Query: 584 LVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLI 643
           L+EG +VALLGYG MVQNCL ARALL+ LG+  TVADARFCKPLD  L+R+L +NH  +I
Sbjct: 540 LLEGTEVALLGYGTMVQNCLAARALLADLGVAATVADARFCKPLDRDLIRQLAKNHQVII 599

Query: 644 TVEEGSIGGFGSHVSHFIALDGLLDSGVKWR--PIVLPDNYIEHASPTQQLALAGLTGHH 701
           TVEEGSIGGFGSHV+ F+ALDGLLD  +K    P+VLPD YIEH +P  Q A AGLT  H
Sbjct: 600 TVEEGSIGGFGSHVAQFMALDGLLDGKLKASLLPLVLPDRYIEHGAPKDQYAEAGLTAGH 659

Query: 702 IAATALSLLGRTREALLLM 720
           IAATAL++LG+TREAL +M
Sbjct: 660 IAATALNVLGKTREALQVM 678


>gi|301341852|gb|ADK73609.1| 1-D-deoxyxylulose 5-phosphate synthase [Solanum tuberosum]
          Length = 719

 Score =  810 bits (2092), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 408/665 (61%), Positives = 497/665 (74%), Gaps = 12/665 (1%)

Query: 64  CALPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKS 123
            +L +  +++  + PTPILD V  P+ +K+L++KELKQLA E+RS+    VSKT   L S
Sbjct: 58  ASLSESGEYYTQRPPTPILDTVNYPIHMKNLSLKELKQLADELRSDTIFNVSKTGGHLGS 117

Query: 124 SLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSE 183
           SL  VELTVALH+VF+AP D+ILWDVG Q+Y HKILTGRR  + TLR+ DG++G+T RSE
Sbjct: 118 SLGVVELTVALHYVFNAPQDRILWDVGHQSYPHKILTGRRDKMSTLRQTDGLAGFTKRSE 177

Query: 184 SEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDS 243
           SEYD F  GH   ++SAGLGMAV RD+KG+   ++ VI +G   AGQAYEAM+NAGYLDS
Sbjct: 178 SEYDCFGTGHSSTTISAGLGMAVGRDLKGRNNNVIAVIGDGAMTAGQAYEAMNNAGYLDS 237

Query: 244 NMIVILNDSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGM 302
           +MIVILND+R  SL     + P   + ALSS LSR+QS++  R+LREVAKG+TK+IG  M
Sbjct: 238 DMIVILNDNRQVSLPTATLDGPVAPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPM 297

Query: 303 HEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLV 362
           HE AAKVDEYARGMI   GSTLFEELGLYYIGPVDGHNI+DLI++L+EV S  + GPVL+
Sbjct: 298 HELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDLIAILKEVRSTKTTGPVLI 357

Query: 363 HVVTEENR------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAE 416
           HVVTE+ R      RA D     A      G            +++Y   F EAL+ EAE
Sbjct: 358 HVVTEKGRGYPYAERAADKYHGVAKFDPATG----KQFKANAKTQSYTTYFAEALIAEAE 413

Query: 417 KDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSA 476
            DKDIV +HA M     + LF  +FP R FDVG+AEQ AVTF+AGLAC G+KPFC I S+
Sbjct: 414 ADKDIVAIHAAMGGGTGMNLFHRRFPTRCFDVGIAEQRAVTFAAGLACEGIKPFCAIYSS 473

Query: 477 FLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDE 536
           F+QRAYDQVV+DVD Q+LPVRF +  AGLVG+DGPT CGAFD+T+M+CLPNM+VMAPSDE
Sbjct: 474 FMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTYMACLPNMVVMAPSDE 533

Query: 537 DELVDMVATVASIDDRPVCFRYPRGAIVRTDLP-GYRGIPIEIGKGKVLVEGKDVALLGY 595
            EL  MVAT A+IDDRP CFRYPRG  +  +LP G +GIP+E+GKG++L+EG+ VALLGY
Sbjct: 534 AELFHMVATAAAIDDRPSCFRYPRGNGIGVELPAGNKGIPLEVGKGRILIEGERVALLGY 593

Query: 596 GAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGS 655
           G+ VQNCL A  +L   GI VTVADARFCKPLD  L+R L ++H  LITVEEGSIGGFGS
Sbjct: 594 GSAVQNCLDAAIVLESRGIQVTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGS 653

Query: 656 HVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTRE 715
           HV  F+ALDGLLD  +KWRPIVLPD YI+H SP  QLA AGLT  HIAAT  ++LG+TRE
Sbjct: 654 HVVQFMALDGLLDGKLKWRPIVLPDRYIDHGSPVDQLAEAGLTPSHIAATVFNILGQTRE 713

Query: 716 ALLLM 720
           AL +M
Sbjct: 714 ALEVM 718


>gi|356563764|ref|XP_003550129.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic-like [Glycine max]
          Length = 712

 Score =  809 bits (2089), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 400/658 (60%), Positives = 499/658 (75%), Gaps = 12/658 (1%)

Query: 71  DFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVEL 130
           +++  + PTP+LD V  P+ +K+L+  ELKQLA E+RS++   VS+T   L SSL  VEL
Sbjct: 58  EYYSQRPPTPLLDTVNYPIHMKNLSTNELKQLADELRSDVIFSVSRTGGHLGSSLGVVEL 117

Query: 131 TVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFN 190
           TVALH+VF+AP DKILWDVG Q+Y HKILTGRR  +HT+R+ +G+SG+T RSESE+D F 
Sbjct: 118 TVALHYVFNAPQDKILWDVGHQSYPHKILTGRRDKMHTMRQTNGLSGFTKRSESEFDCFG 177

Query: 191 AGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
            GH   ++SAGLGMAV RD+KG++  +V VI +G   AGQAYEAM+NAGYLDS+MIVILN
Sbjct: 178 TGHSSTTISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 237

Query: 251 DSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKV 309
           D++  SL     + P   + ALSS LSR+QS++  R+LREVAKG+TKRIG  MHE AAKV
Sbjct: 238 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKRIGGPMHELAAKV 297

Query: 310 DEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN 369
           DEYARGMI   GS+LFEELGLYYIGPVDGHNI DL+++L EV S  + GPVL+HV+TE+ 
Sbjct: 298 DEYARGMISGSGSSLFEELGLYYIGPVDGHNINDLVAILNEVKSTNTTGPVLIHVITEKG 357

Query: 370 RRAEDTQKSEAIEKQQEGASDSNSLPFGNY------SRTYDDCFIEALVMEAEKDKDIVV 423
           R     +K+     +  G +  +  P G        +R+Y   F EAL+ EAE DKD+V 
Sbjct: 358 RGYPYAEKAA---DKYHGVTKFDP-PTGKQFKSKATTRSYTTYFAEALIAEAEADKDVVA 413

Query: 424 VHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYD 483
           +HA M     + LF  +FP R FDVG+AEQHAVTF+AGLAC GLKPFC I S+F+QRAYD
Sbjct: 414 IHAAMGGGTGMNLFHRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYD 473

Query: 484 QVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMV 543
           QVV+DVD Q+LPVRF +  AGLVG+DGPT CG+FD+TFM+CLPNM+VMAPSDE EL  MV
Sbjct: 474 QVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMV 533

Query: 544 ATVASIDDRPVCFRYPRGAIVRTDLP-GYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNC 602
           AT A+I+DRP CFRYPRG  +   LP G +G P+EIGKG++L+EG+ VALLGYG+ VQNC
Sbjct: 534 ATAAAINDRPSCFRYPRGNGIGVQLPTGNKGTPLEIGKGRILIEGERVALLGYGSAVQNC 593

Query: 603 LKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIA 662
           L A +L+   G+ VTVADARFCKPLD  L+R L ++H  LITVEEGSIGGFGSHV+ F+A
Sbjct: 594 LAAASLVEHHGLRVTVADARFCKPLDRSLIRSLAKSHEVLITVEEGSIGGFGSHVAQFMA 653

Query: 663 LDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLLM 720
           LDGL+D  +KWRPIVLPD YI+H SP  QL+LAGLT  HIAAT  ++LG+TREAL +M
Sbjct: 654 LDGLIDGKLKWRPIVLPDRYIDHGSPADQLSLAGLTPSHIAATVFNILGQTREALEVM 711


>gi|35187002|gb|AAQ84169.1| 1-deoxy-D-xylulose 5-phosphate synthase [Pueraria montana var.
           lobata]
          Length = 717

 Score =  808 bits (2088), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 417/729 (57%), Positives = 526/729 (72%), Gaps = 33/729 (4%)

Query: 1   MVTPSAKYPLELPLTAHCHGTLDQRKIEFLSSNISRELEISRINLCPSSSSITSSKLVTV 60
            VTPS      LPL +H    LD     FL+    +     R+N     SS         
Sbjct: 12  FVTPSDPR-RSLPLPSHSQWGLD-----FLA----QSQHTHRLNQMKKRSS--------- 52

Query: 61  SRIC-ALPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEK 119
             +C +L +  +++  + PTP+LD +  P+ +K+L+ KELKQLA E+RS++   VS+T  
Sbjct: 53  -GVCTSLSERGEYYSQRPPTPLLDTINYPIHMKNLSTKELKQLADELRSDVIFSVSRTGG 111

Query: 120 SLKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYT 179
            L SSL  VELTVALH+VF+ P DKILWDVG Q+Y HKILTGRR  +HT+R+ +G+SG+T
Sbjct: 112 HLGSSLGVVELTVALHYVFNTPQDKILWDVGHQSYPHKILTGRRDKMHTMRQTNGLSGFT 171

Query: 180 SRSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAG 239
            RSESEYD F  GH   ++SAGLGMAV RD+KG++  +V VI +G   AGQAYEA++NAG
Sbjct: 172 KRSESEYDCFGTGHSSTTISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEALNNAG 231

Query: 240 YLDSNMIVILNDSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRI 298
           YLDS+MIVILND++  SL     + P   + ALSS LSR+QS++  R+LREVAKG+TKRI
Sbjct: 232 YLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKRI 291

Query: 299 GRGMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMG 358
           G  MHE AAKVDEYARGMI   GSTLFEELGLYYIGPVDGHNI+DL+++L EV S  + G
Sbjct: 292 GGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDLVAILNEVKSTKTTG 351

Query: 359 PVLVHVVTEENRRAEDTQKSEAIEKQQEGASDSNSLPFGNY------SRTYDDCFIEALV 412
           PVL+HV+TE+ R     +K+     +  G +  +  P G        +++Y   F EAL+
Sbjct: 352 PVLIHVITEKGRGYPYAEKAA---DKYHGVTKFDP-PTGKQFKSKATTQSYTTYFAEALI 407

Query: 413 MEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCI 472
            EAE DKDIV +HA M     + +F  +FP R FDVG+AEQHAVTF+AGLAC GLKPFC 
Sbjct: 408 AEAEADKDIVAIHAAMGGGTGMNIFHRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCA 467

Query: 473 IPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMA 532
           I S+F+QRAYDQVV+DVD Q+LPVRF +  AGLVG+DGPT CG+FD+TFM+CLPNM+VMA
Sbjct: 468 IYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMA 527

Query: 533 PSDEDELVDMVATVASIDDRPVCFRYPRGAIVRTDLP-GYRGIPIEIGKGKVLVEGKDVA 591
           PSDE EL  MVAT A+I+DRP CFRYPRG  +   LP G +G P+EIGKG++L+EG+ VA
Sbjct: 528 PSDEAELFHMVATAAAINDRPSCFRYPRGNGIGVQLPTGNKGTPLEIGKGRILIEGERVA 587

Query: 592 LLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIG 651
           LLGYG+ VQNCL A +L+ + G+ +TVADARFCKPLD  L+R L ++H  LITVEEGSIG
Sbjct: 588 LLGYGSAVQNCLAAASLVERHGLRLTVADARFCKPLDRSLIRSLAKSHEVLITVEEGSIG 647

Query: 652 GFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
           GFGSHV+ F+ALDGLLD  +KWRPIVLPD YI+H SP  QL+LAGLT  HIAAT  ++LG
Sbjct: 648 GFGSHVAQFMALDGLLDGKLKWRPIVLPDRYIDHGSPADQLSLAGLTPSHIAATVFNILG 707

Query: 712 RTREALLLM 720
           +TREAL +M
Sbjct: 708 QTREALEVM 716


>gi|55295806|dbj|BAD67657.1| putative 1-deoxy-D-xylulose 5-phosphate synthase 1 [Oryza sativa
           Japonica Group]
 gi|215768492|dbj|BAH00721.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 565

 Score =  808 bits (2087), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/565 (67%), Positives = 463/565 (81%), Gaps = 5/565 (0%)

Query: 114 VSKTEKSLKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKD 173
           +S+  +   +  + VEL +A+H+VF+AP+DKILWD G+ TYAHKILTGRRSL HT++++ 
Sbjct: 1   MSRKCQPCNTGHSVVELAIAIHYVFNAPMDKILWDAGQHTYAHKILTGRRSLFHTIKQRK 60

Query: 174 GISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYE 233
           G+SG+TSR ESEYDPF AGHGCNS+SAGLGMAVARD+ G++  IVTVISN TTMAGQ YE
Sbjct: 61  GLSGFTSRFESEYDPFGAGHGCNSLSAGLGMAVARDLGGRKNRIVTVISNWTTMAGQVYE 120

Query: 234 AMSNAGYLDSNMIVILNDSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKG 293
           AM +AG+LDSNM+VILNDSRH+L PK +   K SINALSS LS++QSSK FR+ RE AKG
Sbjct: 121 AMGHAGFLDSNMVVILNDSRHTLLPKADSQSKMSINALSSALSKVQSSKGFRKFREAAKG 180

Query: 294 MTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVAS 353
           ++K  G+GMHE+AAK+DEYARGMIGP G+TLFEELGLYYIGP+DG+NI+DLI VL+EV++
Sbjct: 181 LSKWFGKGMHEFAAKIDEYARGMIGPHGATLFEELGLYYIGPIDGNNIDDLICVLKEVST 240

Query: 354 LGSMGPVLVHVVTEENRRAEDTQKSEAIEKQQEGASDSNS--LPF--GNYSRTYDDCFIE 409
           L S GPVLVHV+TE  + +     SE I   +EG  DS+   L F     SRTY+DCF+E
Sbjct: 241 LDSTGPVLVHVITENEKDSGGEFNSE-ITPDEEGPPDSSQDILKFLENGLSRTYNDCFVE 299

Query: 410 ALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKP 469
           +L+ EAE DK IVVVH GM +D S+QLFQ +FP+R+FD+G+AEQHAVTFSAGLACGGLKP
Sbjct: 300 SLIAEAENDKHIVVVHGGMGIDRSIQLFQSRFPDRFFDLGIAEQHAVTFSAGLACGGLKP 359

Query: 470 FCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMI 529
           FCIIPS FLQRAYDQ+V DVD Q++PVRF ITSAGLVGS+GPT  G FDITFMSCLPNMI
Sbjct: 360 FCIIPSTFLQRAYDQIVEDVDMQKIPVRFAITSAGLVGSEGPTNSGPFDITFMSCLPNMI 419

Query: 530 VMAPSDEDELVDMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKD 589
           VM+PS+EDEL+DMVAT A ++DRP+CFRYP+GAIV T      G P+EIGKG++L EGK+
Sbjct: 420 VMSPSNEDELIDMVATAAMVEDRPICFRYPKGAIVGTSGTLAYGNPLEIGKGEILAEGKE 479

Query: 590 VALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS 649
           +A LGYG +VQ CL AR+LL   GI  TVA+ARFCKPLDI L+R LCQ H FLITVEEG+
Sbjct: 480 IAFLGYGDVVQRCLIARSLLFNFGIQATVANARFCKPLDIDLIRMLCQQHDFLITVEEGT 539

Query: 650 IGGFGSHVSHFIALDGLLDSGVKWR 674
           +GGFGSHVS FI+LDGLLD  +K R
Sbjct: 540 VGGFGSHVSQFISLDGLLDGKIKVR 564


>gi|115463849|ref|NP_001055524.1| Os05g0408900 [Oryza sativa Japonica Group]
 gi|90110016|sp|O22567.2|DXS1_ORYSJ RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase 1,
           chloroplastic; Short=1-deoxyxylulose-5-phosphate
           synthase; Short=DXP synthase; Short=DXPS; Flags:
           Precursor
 gi|49328155|gb|AAT58851.1| putative 1-deoxy-D-xylulose-5-phosphate synthase [Oryza sativa
           Japonica Group]
 gi|113579075|dbj|BAF17438.1| Os05g0408900 [Oryza sativa Japonica Group]
 gi|215694297|dbj|BAG89290.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215740838|dbj|BAG96994.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222631568|gb|EEE63700.1| hypothetical protein OsJ_18518 [Oryza sativa Japonica Group]
          Length = 720

 Score =  807 bits (2085), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 398/658 (60%), Positives = 490/658 (74%), Gaps = 12/658 (1%)

Query: 71  DFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVEL 130
           ++   + PTP+LD V  P+ +K+L++KEL+QLA E+RS++   VSKT   L SSL  VEL
Sbjct: 62  EYHSQRPPTPLLDTVNYPIHMKNLSLKELQQLADELRSDVIFHVSKTGGHLGSSLGVVEL 121

Query: 131 TVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFN 190
           TVALH+VF+ P DKILWDVG Q+Y HKILTGRR  + T+R+ +G+SG+T RSESEYD F 
Sbjct: 122 TVALHYVFNTPQDKILWDVGHQSYPHKILTGRRDKMPTMRQTNGLSGFTKRSESEYDSFG 181

Query: 191 AGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
            GH   ++SA LGMAV RD+KG +  +V VI +G   AGQAYEAM+NAGYLDS+MIVILN
Sbjct: 182 TGHSSTTISAALGMAVGRDLKGGKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 241

Query: 251 DSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKV 309
           D++  SL     + P   + ALSS LS++QSS+  R+LREVAKG+TK+IG  +HE AAKV
Sbjct: 242 DNKQVSLPTATLDGPAPPVGALSSALSKLQSSRPLRELREVAKGVTKQIGGSVHELAAKV 301

Query: 310 DEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN 369
           DEYARGMI   GSTLFEELGLYYIGPVDGHNI+DLI++L+EV S  + GPVL+HVVTE+ 
Sbjct: 302 DEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDLITILREVKSTKTTGPVLIHVVTEKG 361

Query: 370 R------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVV 423
           R      RA D  K   + K           P    S  Y + F EAL+ EAE+D  +V 
Sbjct: 362 RGYPYAERAAD--KYHGVAKFDPATGKQFKSPAKTLS--YTNYFAEALIAEAEQDNRVVA 417

Query: 424 VHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYD 483
           +HA M     L  F  +FP R FDVG+AEQHAVTF+AGLAC GLKPFC I S+FLQR YD
Sbjct: 418 IHAAMGGGTGLNYFLRRFPNRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFLQRGYD 477

Query: 484 QVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMV 543
           QVV+DVD Q+LPVRF +  AGLVG+DGPT CGAFD+T+M+CLPNM+VMAPSDE EL  MV
Sbjct: 478 QVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTYMACLPNMVVMAPSDEAELCHMV 537

Query: 544 ATVASIDDRPVCFRYPRGAIVRTDL-PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNC 602
           AT A+IDDRP CFRYPRG  +   L P Y+G+P+E+GKG+VL+EG+ VALLGYG+ VQ C
Sbjct: 538 ATAAAIDDRPSCFRYPRGNGIGVPLPPNYKGVPLEVGKGRVLLEGERVALLGYGSAVQYC 597

Query: 603 LKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIA 662
           L A +L+ + G+ VTVADARFCKPLD  L+R L  +H  L+TVEEGSIGGFGSHV+ F+A
Sbjct: 598 LAAASLVERHGLKVTVADARFCKPLDQTLIRRLASSHEVLLTVEEGSIGGFGSHVAQFMA 657

Query: 663 LDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLLM 720
           LDGLLD  +KWRP+VLPD YI+H SP  QLA AGLT  HIAAT  ++LG+ REAL +M
Sbjct: 658 LDGLLDGKLKWRPLVLPDRYIDHGSPADQLAEAGLTPSHIAATVFNVLGQAREALAIM 715


>gi|297605162|ref|NP_001056773.2| Os06g0142900 [Oryza sativa Japonica Group]
 gi|255676709|dbj|BAF18687.2| Os06g0142900 [Oryza sativa Japonica Group]
          Length = 562

 Score =  807 bits (2084), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/563 (67%), Positives = 462/563 (82%), Gaps = 5/563 (0%)

Query: 114 VSKTEKSLKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKD 173
           +S+  +   +  + VEL +A+H+VF+AP+DKILWD G+ TYAHKILTGRRSL HT++++ 
Sbjct: 1   MSRKCQPCNTGHSVVELAIAIHYVFNAPMDKILWDAGQHTYAHKILTGRRSLFHTIKQRK 60

Query: 174 GISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYE 233
           G+SG+TSR ESEYDPF AGHGCNS+SAGLGMAVARD+ G++  IVTVISN TTMAGQ YE
Sbjct: 61  GLSGFTSRFESEYDPFGAGHGCNSLSAGLGMAVARDLGGRKNRIVTVISNWTTMAGQVYE 120

Query: 234 AMSNAGYLDSNMIVILNDSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKG 293
           AM +AG+LDSNM+VILNDSRH+L PK +   K SINALSS LS++QSSK FR+ RE AKG
Sbjct: 121 AMGHAGFLDSNMVVILNDSRHTLLPKADSQSKMSINALSSALSKVQSSKGFRKFREAAKG 180

Query: 294 MTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVAS 353
           ++K  G+GMHE+AAK+DEYARGMIGP G+TLFEELGLYYIGP+DG+NI+DLI VL+EV++
Sbjct: 181 LSKWFGKGMHEFAAKIDEYARGMIGPHGATLFEELGLYYIGPIDGNNIDDLICVLKEVST 240

Query: 354 LGSMGPVLVHVVTEENRRAEDTQKSEAIEKQQEGASDSNS--LPF--GNYSRTYDDCFIE 409
           L S GPVLVHV+TE  + +     SE I   +EG  DS+   L F     SRTY+DCF+E
Sbjct: 241 LDSTGPVLVHVITENEKDSGGEFNSE-ITPDEEGPPDSSQDILKFLENGLSRTYNDCFVE 299

Query: 410 ALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKP 469
           +L+ EAE DK IVVVH GM +D S+QLFQ +FP+R+FD+G+AEQHAVTFSAGLACGGLKP
Sbjct: 300 SLIAEAENDKHIVVVHGGMGIDRSIQLFQSRFPDRFFDLGIAEQHAVTFSAGLACGGLKP 359

Query: 470 FCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMI 529
           FCIIPS FLQRAYDQ+V DVD Q++PVRF ITSAGLVGS+GPT  G FDITFMSCLPNMI
Sbjct: 360 FCIIPSTFLQRAYDQIVEDVDMQKIPVRFAITSAGLVGSEGPTNSGPFDITFMSCLPNMI 419

Query: 530 VMAPSDEDELVDMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKD 589
           VM+PS+EDEL+DMVAT A ++DRP+CFRYP+GAIV T      G P+EIGKG++L EGK+
Sbjct: 420 VMSPSNEDELIDMVATAAMVEDRPICFRYPKGAIVGTSGTLAYGNPLEIGKGEILAEGKE 479

Query: 590 VALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS 649
           +A LGYG +VQ CL AR+LL   GI  TVA+ARFCKPLDI L+R LCQ H FLITVEEG+
Sbjct: 480 IAFLGYGDVVQRCLIARSLLFNFGIQATVANARFCKPLDIDLIRMLCQQHDFLITVEEGT 539

Query: 650 IGGFGSHVSHFIALDGLLDSGVK 672
           +GGFGSHVS FI+LDGLLD  +K
Sbjct: 540 VGGFGSHVSQFISLDGLLDGKIK 562


>gi|218196788|gb|EEC79215.1| hypothetical protein OsI_19939 [Oryza sativa Indica Group]
          Length = 720

 Score =  806 bits (2083), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 398/660 (60%), Positives = 492/660 (74%), Gaps = 16/660 (2%)

Query: 71  DFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVEL 130
           ++   + PTP+LD V  P+ +K+L++KEL+QLA E+RS++   VSKT   L SSL  VEL
Sbjct: 62  EYHSQRPPTPLLDTVNYPIHMKNLSLKELQQLADELRSDVIFHVSKTGGHLGSSLGVVEL 121

Query: 131 TVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFN 190
           TVALH+VF+ P DKILWDVG Q+Y HKILTGRR  + T+R+ +G+SG+T RSESEYD F 
Sbjct: 122 TVALHYVFNTPQDKILWDVGHQSYPHKILTGRRDKMPTMRQTNGLSGFTKRSESEYDSFG 181

Query: 191 AGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
            GH   ++SA LGMAV RD+KG +  +V VI +G   AGQAYEAM+NAGYLDS+MIVILN
Sbjct: 182 TGHSSTTISAALGMAVGRDLKGGKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 241

Query: 251 DSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKV 309
           D++  SL     + P   + ALSS LS++QSS+  R+LREVAKG+TK+IG  +HE AAKV
Sbjct: 242 DNKQVSLPTATLDGPAPPVGALSSALSKLQSSRPLRELREVAKGVTKQIGGSVHELAAKV 301

Query: 310 DEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN 369
           DEYARGMI   GSTLFEELGLYYIGPVDGHNI+DLI++L+EV S  + GPVL+HVVTE+ 
Sbjct: 302 DEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDLITILREVKSTKTTGPVLIHVVTEKG 361

Query: 370 R------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRT--YDDCFIEALVMEAEKDKDI 421
           R      RA D     A      G        F + ++T  Y + F EAL+ EAE+D  +
Sbjct: 362 RGYPYAERAADKYHGVAKFDPATGKQ------FKSLAKTLSYTNYFAEALIAEAEQDNRV 415

Query: 422 VVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRA 481
           V +HA M     L  F  +FP R FDVG+AEQHAVTF+AGLAC GLKPFC I S+FLQR 
Sbjct: 416 VAIHAAMGGGTGLNYFLRRFPNRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFLQRG 475

Query: 482 YDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVD 541
           YDQVV+DVD Q+LPVRF +  AGLVG+DGPT CGAFD+T+M+CLPNM+VMAPSDE EL  
Sbjct: 476 YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTYMACLPNMVVMAPSDEAELCH 535

Query: 542 MVATVASIDDRPVCFRYPRGAIVRTDL-PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQ 600
           MVAT A+IDDRP CFRYPRG  +   L P Y+G+P+E+GKG+VL+EG+ VALLGYG+ VQ
Sbjct: 536 MVATAAAIDDRPSCFRYPRGNGIGVPLPPNYKGVPLEVGKGRVLLEGERVALLGYGSAVQ 595

Query: 601 NCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHF 660
            CL A +L+ + G+ VTVADARFCKPLD  L+R L  +H  L+TVEEGSIGGFGSHV+ F
Sbjct: 596 YCLAAASLVERHGLKVTVADARFCKPLDQALIRRLASSHEVLLTVEEGSIGGFGSHVAQF 655

Query: 661 IALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLLM 720
           +ALDGLLD  +KWRP+VLPD YI+H SP  QLA AGLT  HIAAT  ++LG+ REAL +M
Sbjct: 656 MALDGLLDGKLKWRPLVLPDRYIDHGSPADQLAEAGLTPSHIAATVFNVLGQAREALAIM 715


>gi|356546474|ref|XP_003541651.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic-like [Glycine max]
          Length = 721

 Score =  806 bits (2082), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 414/683 (60%), Positives = 509/683 (74%), Gaps = 27/683 (3%)

Query: 56  KLVTVSR----ICA-LPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSEL 110
           KL  V R    +CA L ++ +++  K PTP+LD +  P+ +K+L  K+LKQLA E+RS++
Sbjct: 47  KLNQVKRRPHGVCASLSEMGEYYSQKPPTPLLDTINYPIHMKNLATKKLKQLADELRSDV 106

Query: 111 SSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLR 170
              VS+T   L SSL  VELT+ALH+VF+AP DKILWDVG Q+Y HKILTGRR  +HT+R
Sbjct: 107 IFHVSRTGGHLGSSLGVVELTIALHYVFNAPKDKILWDVGHQSYPHKILTGRRDKMHTMR 166

Query: 171 KKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQ 230
           + DG++G+T RSES+YD F  GH   ++SAGLGMAV RD+KG +  +V VI +G   AGQ
Sbjct: 167 QTDGLAGFTKRSESDYDCFGTGHSSTTISAGLGMAVGRDLKGDKNNVVAVIGDGAMTAGQ 226

Query: 231 AYEAMSNAGYLDSNMIVILNDSRHSLHPKIE-ESPKTSINALSSTLSRIQSSKSFRQLRE 289
           AYEAM+NAGYLDS+MIVILND++    P    + P   + ALSS LS++QS++  R+LRE
Sbjct: 227 AYEAMNNAGYLDSDMIVILNDNKQVSLPTANLDGPIPPVGALSSALSKLQSNRPLRELRE 286

Query: 290 VAKGMTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQ 349
           VAKG+TK+IG  MHE AAKVDEYARGMI   GSTLFEELGLYYIGPVDGHNI+DL+S+L 
Sbjct: 287 VAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDLVSILN 346

Query: 350 EVASLGSMGPVLVHVVTEENR------RAED-----TQKSEAIEKQQEGASDSNSLPFGN 398
           EV S  + GPVL+HVVTE+        RA D     T+   A  KQ +    SN+     
Sbjct: 347 EVKSTKTTGPVLLHVVTEKGHGYPYAERAADKYHGVTKFDPATGKQFK----SNAA---- 398

Query: 399 YSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTF 458
            +++Y   F EAL+ EAE DKDIV +HA M     + LF  +FP R FDVG+AEQHAVTF
Sbjct: 399 -TQSYTTYFAEALIAEAEADKDIVGIHAAMGGGTGMNLFLRRFPTRCFDVGIAEQHAVTF 457

Query: 459 SAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFD 518
           +AGLAC GLKPFC I S+F+QRAYDQVV+DVD Q+LPVRF +  AGLVG+DGPT CGAFD
Sbjct: 458 AAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFD 517

Query: 519 ITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYPRGAIVRTDLP-GYRGIPIE 577
           +TFM+CLPNM+VMAPSDE EL  MVAT A+IDDRP CFRYPRG  +  +LP G +GIP+E
Sbjct: 518 VTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPLGNKGIPLE 577

Query: 578 IGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQ 637
           IGKG++L+EG+ VALLGYG+ VQ+CL A +LL   G+  TVADARFCKPLD  L+R L Q
Sbjct: 578 IGKGRILIEGERVALLGYGSAVQSCLAAASLLEHHGLRATVADARFCKPLDRSLIRSLAQ 637

Query: 638 NHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGL 697
           +H  LITVEEGSIGGFGSHV  F+ALDGLLD  +KWRPIVLPD YI+H SP  QL+ AGL
Sbjct: 638 SHEVLITVEEGSIGGFGSHVVQFMALDGLLDGKLKWRPIVLPDCYIDHGSPVDQLSAAGL 697

Query: 698 TGHHIAATALSLLGRTREALLLM 720
           T  HIAAT  +LLG+TREAL +M
Sbjct: 698 TPSHIAATVFNLLGQTREALEVM 720


>gi|183206797|gb|ACC54557.1| putative 1-D-deoxyxylulose 5-phosphate synthase type 1 [Pinus
           densiflora]
          Length = 707

 Score =  805 bits (2079), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 399/664 (60%), Positives = 493/664 (74%), Gaps = 16/664 (2%)

Query: 65  ALPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSS 124
           AL D  +++ +K PTP+LD +  P+ +K+L+I+ELKQL+ E+RS++   VS+T   L SS
Sbjct: 51  ALSDQGEYYSEKPPTPLLDTINYPIHMKNLSIRELKQLSNELRSDIIFEVSRTGGHLGSS 110

Query: 125 LAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSES 184
           L  VELTVALH+VF AP DKILWDVG Q Y HKILTGRR  + TLR+ +G+SG+T RSES
Sbjct: 111 LGVVELTVALHYVFDAPEDKILWDVGHQAYPHKILTGRRDKMPTLRQTNGLSGFTKRSES 170

Query: 185 EYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSN 244
           EYD F AGH   S+SAGLGMA  RD+KGK   +++VI +G   AGQA+EAM+NA YLDSN
Sbjct: 171 EYDCFGAGHSSTSISAGLGMAAGRDLKGKNNHVISVIGDGAMTAGQAFEAMNNARYLDSN 230

Query: 245 MIVILNDSRHSLHPKIE-ESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMH 303
           MIVILND++    P    + P   + ALS    ++QSSK  R+LREVAKG+TK++G  MH
Sbjct: 231 MIVILNDNKQVSLPTANLDGPIPPVGALS----KLQSSKPLRELREVAKGVTKQLGAPMH 286

Query: 304 EWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVH 363
           E AAKVDEYARGMI    STLFEELGLYYIGPVDGHNI+DL+++L++V +  + GPVL+H
Sbjct: 287 ELAAKVDEYARGMISGSRSTLFEELGLYYIGPVDGHNIDDLLTILRDVKATHTTGPVLIH 346

Query: 364 VVTEENR------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEK 417
           VVTE+ R      RA D            G       P    ++TY   F EAL+ EAE 
Sbjct: 347 VVTEKGRGYPYAERAADKYHGVVKFDPATGKQFKGKAP----TQTYTTYFAEALISEAEA 402

Query: 418 DKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAF 477
           DK+IV VHA M     L +F ++FP R FDVG+AEQHAVTF+AGLAC GLKPFC I S+F
Sbjct: 403 DKNIVAVHAAMGGGTGLNMFSKRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSF 462

Query: 478 LQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDED 537
           LQRAYDQV++DVD Q LPVRF +  AGLVG+DGPT CGAFD+T+++CLPNM+VMAPS+E 
Sbjct: 463 LQRAYDQVIHDVDLQNLPVRFAMDRAGLVGADGPTHCGAFDVTYLACLPNMVVMAPSNEA 522

Query: 538 ELVDMVATVASIDDRPVCFRYPRGAIVRTDL-PGYRGIPIEIGKGKVLVEGKDVALLGYG 596
           EL  MVAT A+IDDRP CF +PRG  V   L PG +G+P+EIGKG++LVEG  VALLGYG
Sbjct: 523 ELFHMVATAAAIDDRPSCFGFPRGNGVGAQLPPGNKGVPLEIGKGRILVEGDRVALLGYG 582

Query: 597 AMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSH 656
            +VQNCL A ALL +  + VTVADARFCKPLD  LVR L + H  LITVEEG+IGGFGSH
Sbjct: 583 TVVQNCLAASALLEEQDLSVTVADARFCKPLDRDLVRSLAREHEVLITVEEGTIGGFGSH 642

Query: 657 VSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREA 716
           V+HF+ALDG LD  +KWRP+VLPD+YIEH +P+ Q+  AGLT  HIAA+ L++LGRTREA
Sbjct: 643 VAHFLALDGFLDGKLKWRPMVLPDHYIEHGAPSDQMIEAGLTASHIAASVLNMLGRTREA 702

Query: 717 LLLM 720
           L +M
Sbjct: 703 LQVM 706


>gi|408537471|gb|AFU75321.1| 1-deoxy-D-xylulose-5-phosphate synthase 2 [Aquilaria sinensis]
          Length = 717

 Score =  805 bits (2078), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 396/656 (60%), Positives = 493/656 (75%), Gaps = 8/656 (1%)

Query: 71  DFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVEL 130
           ++   ++PTP+LD +  P+ +K+L+IKELKQLA E+RS++   VS+T   L SSL  VEL
Sbjct: 63  EYHSQRQPTPLLDTINYPIHMKNLSIKELKQLAEELRSDVIFNVSETGGHLGSSLGVVEL 122

Query: 131 TVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFN 190
           TVALH+VF+AP DKILWDVG Q+Y HKILTGRR  +HT+R+ +G+SG+T RSESEYD F 
Sbjct: 123 TVALHYVFNAPQDKILWDVGHQSYPHKILTGRRDRMHTMRQTNGLSGFTKRSESEYDCFG 182

Query: 191 AGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
            GH   ++SAGLGMAV RD+KGKR  +V VI +G   AGQAYEAM+NAGYLDS+MIVILN
Sbjct: 183 TGHSSTTISAGLGMAVGRDLKGKRNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 242

Query: 251 DSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKV 309
           D++  SL     + P   + ALSS LSR+QS++  R+LREVAKG+TK++   MHE AAKV
Sbjct: 243 DNKQVSLPTATLDGPAPPVGALSSALSRLQSNRPLRELREVAKGVTKQLPGPMHELAAKV 302

Query: 310 DEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN 369
           DEYARGMI   GSTLFEELGLYYIGPVDGHN++DL+++L+EV S  + GPVL+HVVTE+ 
Sbjct: 303 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILKEVKSTKTTGPVLIHVVTEKG 362

Query: 370 RRAEDTQKSEAIEKQQE----GASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVH 425
           R     +K  A +K         +    L     +++Y   F EAL+ EAE D+DIV +H
Sbjct: 363 RGYPYAEK--AADKYHGVVKFDPATGKQLKPSAKTQSYTTYFAEALIAEAEVDQDIVAIH 420

Query: 426 AGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQV 485
           A M     L  F  +FP R FDVG+AEQHAVTF+AGLAC GLKPFC I S+F+QRAYDQV
Sbjct: 421 AAMGGGTGLNHFLHRFPARCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQV 480

Query: 486 VNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVAT 545
           V+DVD Q+LPVRF +  AGLVG+DGPT CGAFD+TFM+CLPNM+VMAPSDE EL  MVAT
Sbjct: 481 VHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMACLPNMVVMAPSDEAELFHMVAT 540

Query: 546 VASIDDRPVCFRYPRGAIVRTDL-PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLK 604
            A+I+DRP CFRYPRG  +   L PG +G P+EIGKG++L+EG+  ALLGYG  VQ+C+ 
Sbjct: 541 AAAINDRPSCFRYPRGNGLGVQLPPGNKGTPLEIGKGRILIEGERAALLGYGTAVQSCIA 600

Query: 605 ARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALD 664
           A + +   G+  TVADARFCKPLD  L+R+L ++H  LITVEEGS GGFGSHV+ F+ALD
Sbjct: 601 AASSVESHGLRPTVADARFCKPLDHGLIRKLAKSHEVLITVEEGSTGGFGSHVAQFLALD 660

Query: 665 GLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLLM 720
           GLLD  VKWRP+VLPD YI+H SP  QLA +GLT  HIAAT  ++LG TREAL +M
Sbjct: 661 GLLDGTVKWRPLVLPDRYIDHGSPADQLAQSGLTPAHIAATLFNILGHTREALEVM 716


>gi|413945326|gb|AFW77975.1| 1-deoxy-D-xylulose 5-phosphate synthase 1 [Zea mays]
          Length = 719

 Score =  802 bits (2072), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 401/700 (57%), Positives = 505/700 (72%), Gaps = 24/700 (3%)

Query: 33  NISRELEISRINLCPSSSSITSSKLVTVSRICALPDIDDFFWDKEPTPILDLVENPLRLK 92
           ++++ L+   INL P       S  ++  R        +++  + PTP+LD +  P+ +K
Sbjct: 29  HVNKLLQARPINLKPRRRPACVSASLSSEREA------EYYSQRPPTPLLDTINYPVHMK 82

Query: 93  SLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDKILWDVGEQ 152
           +L++KEL+QLA E+RS++   VSKT   L SSL  VELTVALH+VF+AP D+ILWDVG Q
Sbjct: 83  NLSVKELRQLADELRSDVIFHVSKTGGHLGSSLGVVELTVALHYVFNAPQDRILWDVGHQ 142

Query: 153 TYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDIKG 212
           +Y HKILTGRR  + T+R+ +G++G+T R+ESEYD F  GH   ++SA LGMAV RD+KG
Sbjct: 143 SYPHKILTGRRDKMPTMRQTNGLAGFTKRAESEYDSFGTGHSSTTISAALGMAVGRDLKG 202

Query: 213 KRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH-SLHPKIEESPKTSINAL 271
            +  +V VI +G   AGQAYEAM+NAGYLDS+MIVILND++  SL     + P   + AL
Sbjct: 203 GKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPVPPVGAL 262

Query: 272 SSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEELGLY 331
           SS LS++QSS+  R+LREVAKG+TK+IG  +HE AAKVDEYARGMI   GS+LFEELGLY
Sbjct: 263 SSALSKLQSSRPLRELREVAKGVTKQIGGSVHELAAKVDEYARGMISGPGSSLFEELGLY 322

Query: 332 YIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR------RAEDTQKSEAIEKQQ 385
           YIGPVDGHNI+DLI++L +V S  + GPVL+HVVTE+ R      RA D     A     
Sbjct: 323 YIGPVDGHNIDDLITILNDVKSTKTTGPVLIHVVTEKGRGYPYAERAADKYHGVAKFDPA 382

Query: 386 EGA---SDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFP 442
            G    S + +L + NY       F EAL+ EAE+D  IV +HA M     L  F  +FP
Sbjct: 383 TGKQFKSPAKTLSYTNY-------FAEALIAEAEQDSKIVAIHAAMGGGTGLNYFLRRFP 435

Query: 443 ERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITS 502
            R FDVG+AEQHAVTF+AGLAC GLKPFC I S+FLQR YDQVV+DVD Q+LPVRF +  
Sbjct: 436 SRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDR 495

Query: 503 AGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYPRGA 562
           AGLVG+DGPT CGAFD+ +M+CLPNM+VMAPSDE EL  MVAT A+IDDRP CFRYPRG 
Sbjct: 496 AGLVGADGPTHCGAFDVAYMACLPNMVVMAPSDEAELCHMVATAAAIDDRPSCFRYPRGN 555

Query: 563 IVRTDL-PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADA 621
            V   L P Y+G P+E+GKG++L+EG  VALLGYG+ VQ CL A +L+ + G+ VTVADA
Sbjct: 556 GVGVPLPPNYKGTPLEVGKGRILLEGDRVALLGYGSAVQYCLTAASLVQRHGLKVTVADA 615

Query: 622 RFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWRPIVLPDN 681
           RFCKPLD  L+R L ++H  LITVEEGSIGGFGSHV+ F+ALDGLLD  +KWRP+VLPD 
Sbjct: 616 RFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVAQFMALDGLLDGKLKWRPLVLPDR 675

Query: 682 YIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLLMC 721
           YI+H SP  QLA AGLT  HIAA+  ++LG+ REAL +M 
Sbjct: 676 YIDHGSPADQLAEAGLTPSHIAASVFNILGQNREALAIMA 715


>gi|155369183|dbj|BAF75640.1| 1-deoxy-D-xylulose-5-phosphate synthase [Croton stellatopilosus]
          Length = 720

 Score =  802 bits (2071), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 396/665 (59%), Positives = 494/665 (74%), Gaps = 12/665 (1%)

Query: 64  CALPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKS 123
            +L +  ++  ++  TP+LD +  P+ +K+L+IKELKQLA E+RS++   VSKT   L S
Sbjct: 58  ASLSESAEYHSNRPATPLLDTINFPIHMKNLSIKELKQLAEELRSDVIFNVSKTGGHLGS 117

Query: 124 SLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSE 183
           SL  VELTVALH++F+ P DKILWDVG Q+Y HKILTGRR  + T+R+ +G+SG+T R+E
Sbjct: 118 SLGVVELTVALHYIFNTPQDKILWDVGHQSYPHKILTGRRDRMRTIRQTNGLSGFTKRAE 177

Query: 184 SEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDS 243
           SE+D F  GH   ++SAGLGMAV RD+K ++  +V VI +G   AGQAYEAM+NAGYLDS
Sbjct: 178 SEHDCFGTGHSSTTISAGLGMAVGRDLKERKNNVVAVIGDGAMTAGQAYEAMNNAGYLDS 237

Query: 244 NMIVILNDSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGM 302
           +MIVILND++  SL     + P   + ALSS LSR+QS++  R+LRE+AKG+TK+IG  M
Sbjct: 238 DMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREIAKGVTKQIGGQM 297

Query: 303 HEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLV 362
           HE AAKVDEYARGMI   GS+LFEELGLYYIGPVDGHNIEDL+ +L+EV S  S GPVL+
Sbjct: 298 HELAAKVDEYARGMISASGSSLFEELGLYYIGPVDGHNIEDLVDILKEVKSTKSTGPVLI 357

Query: 363 HVVTEENR------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAE 416
           HVVTE+ R      RA D  K   + K     +       G  +++Y   F EAL+ EAE
Sbjct: 358 HVVTEKGRGYPYAERAAD--KYHGVTKFDP--ATGKQFKSGGSTQSYTTYFAEALIAEAE 413

Query: 417 KDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSA 476
            DKDIV +HA M     L LF  +FP + FDVG+AEQHAVTF+AGLAC GLKPFC I S+
Sbjct: 414 VDKDIVAIHAAMGGGTGLNLFHRRFPNKCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSS 473

Query: 477 FLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDE 536
           F+QRAYDQVV+DVD Q+LPVRF +  AGL+G+DGPT CGAFD+TFM+C PNM+VMAPS+E
Sbjct: 474 FMQRAYDQVVHDVDLQKLPVRFAMDRAGLIGADGPTHCGAFDVTFMACPPNMVVMAPSNE 533

Query: 537 DELVDMVATVASIDDRPVCFRYPRGAIVRTDL-PGYRGIPIEIGKGKVLVEGKDVALLGY 595
            EL +MVAT A+IDDRP CFRYPRG  +   L PG +GIP E+GKG++L+EG+ VALLGY
Sbjct: 534 AELFNMVATAAAIDDRPSCFRYPRGNGIGVPLPPGNKGIPXEVGKGRILIEGERVALLGY 593

Query: 596 GAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGS 655
           GA VQNCL A +L+   G+ VTVADARFCKPLD  L+R L ++H  LITVEEGSIGGFGS
Sbjct: 594 GAAVQNCLAAASLVETPGLRVTVADARFCKPLDQSLIRSLAKSHEVLITVEEGSIGGFGS 653

Query: 656 HVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTRE 715
           HV+HF+AL+GLLD  +KWRP+V PD YIE  SP  QL  AGLT   IAAT  ++LG  RE
Sbjct: 654 HVAHFMALNGLLDGXLKWRPLVXPDRYIEXGSPADQLIEAGLTPSXIAATIFNILGNKRE 713

Query: 716 ALLLM 720
           AL +M
Sbjct: 714 ALQIM 718


>gi|195612150|gb|ACG27905.1| 1-deoxy-D-xylulose-5-phosphate synthase [Zea mays]
          Length = 719

 Score =  801 bits (2070), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 400/697 (57%), Positives = 502/697 (72%), Gaps = 18/697 (2%)

Query: 33  NISRELEISRINLCPSSSSITSSKLVTVSRICALPDIDDFFWDKEPTPILDLVENPLRLK 92
           ++ + L+   INL P       S  ++  R        +++  + PTP+LD +  P+ +K
Sbjct: 29  HVHKLLQARPINLKPRRRPACVSASLSSEREA------EYYSQRPPTPLLDTINYPVHMK 82

Query: 93  SLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDKILWDVGEQ 152
           +L++KEL+QLA E+RS++   VSKT   L SSL  VELTVALH+VF+AP D+ILWDVG Q
Sbjct: 83  NLSVKELRQLADELRSDVIFHVSKTGGHLGSSLGVVELTVALHYVFNAPQDRILWDVGHQ 142

Query: 153 TYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDIKG 212
           +Y HKILTGRR  + T+R+ +G++G+T R+ESEYD F  GH   ++SA LGMAV RD+KG
Sbjct: 143 SYPHKILTGRRDKMPTMRQTNGLAGFTKRAESEYDSFGTGHSSTTISAALGMAVGRDLKG 202

Query: 213 KRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH-SLHPKIEESPKTSINAL 271
            +  +V VI +G   AGQAYEAM+NAGYLDS+MIVILND++  SL     + P   + AL
Sbjct: 203 GKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPVPPVGAL 262

Query: 272 SSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEELGLY 331
           SS LS++QSS+  R+LREVAKG+TK+IG  +HE AAKVDEYARGMI   GS+LFEELGLY
Sbjct: 263 SSALSKLQSSRPLRELREVAKGVTKQIGGSVHELAAKVDEYARGMISGPGSSLFEELGLY 322

Query: 332 YIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR------RAEDTQKSEAIEKQQ 385
           YIGPVDGHNI+DLI++L +V S  + GPVL+HVVTE+ R      RA D  K   + K  
Sbjct: 323 YIGPVDGHNIDDLITILNDVKSTKTTGPVLIHVVTEKGRGYPYAERAAD--KYHGVAKFD 380

Query: 386 EGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERY 445
                    P    S  Y + F EAL+ EAE+D  IV +HA M     L  F  +FP R 
Sbjct: 381 PATGKQFKSPAKTLS--YTNYFAEALIAEAEQDSKIVAIHAAMGGGTGLNYFLRRFPNRC 438

Query: 446 FDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGL 505
           FDVG+AEQHAVTF+AGLAC GLKPFC I S+FLQR YDQVV+DVD Q+LPVRF +  AGL
Sbjct: 439 FDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGL 498

Query: 506 VGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYPRGAIVR 565
           VG+DGPT CGAFD+ +M+CLPNM+VMAPSDE EL  MVAT A+IDDRP CFRYPRG  V 
Sbjct: 499 VGADGPTHCGAFDVAYMACLPNMVVMAPSDEAELCHMVATAAAIDDRPSCFRYPRGNGVG 558

Query: 566 TDL-PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFC 624
             L P Y+G P+E+GKG++L+EG  VALLGYG+ VQ CL A +L+ + G+ VTVADARFC
Sbjct: 559 VPLPPNYKGTPLEVGKGRILLEGDRVALLGYGSAVQYCLTAASLVQRHGLKVTVADARFC 618

Query: 625 KPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIE 684
           KPLD  L+R L ++H  LITVEEGSIGGFGSHV+ F+ALDGLLD  +KWRP+VLPD YI+
Sbjct: 619 KPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVAQFMALDGLLDGKLKWRPLVLPDRYID 678

Query: 685 HASPTQQLALAGLTGHHIAATALSLLGRTREALLLMC 721
           H SP  QLA AGLT  HIAA+  ++LG+ REAL +M 
Sbjct: 679 HGSPADQLAEAGLTPSHIAASVFNILGQNREALAIMA 715


>gi|145652152|gb|ABP88134.1| 1-deoxy-D-xylulose 5-phosphate synthase [Zea mays]
          Length = 719

 Score =  801 bits (2070), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 400/700 (57%), Positives = 505/700 (72%), Gaps = 24/700 (3%)

Query: 33  NISRELEISRINLCPSSSSITSSKLVTVSRICALPDIDDFFWDKEPTPILDLVENPLRLK 92
           ++++ L+   INL P       S  ++  R        +++  + PTP+LD +  P+ +K
Sbjct: 29  HVNKLLQARPINLKPRRRPACVSASLSSEREA------EYYSQRPPTPLLDTINYPVHMK 82

Query: 93  SLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDKILWDVGEQ 152
           +L++KEL+QLA E+RS++   VSKT   L SSL  VELTVALH+VF+AP D+ILWDVG Q
Sbjct: 83  NLSVKELRQLADELRSDVIFHVSKTGGHLGSSLGVVELTVALHYVFNAPQDRILWDVGHQ 142

Query: 153 TYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDIKG 212
           +Y HKILTGRR  + T+R+ +G++G+T R+ESEYD F  GH   ++SA LGMAV RD+KG
Sbjct: 143 SYPHKILTGRRDKMPTMRQTNGLAGFTKRAESEYDSFGTGHSSTTISAALGMAVGRDLKG 202

Query: 213 KRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH-SLHPKIEESPKTSINAL 271
            +  +V VI +G   AGQAYEAM+NAGYLDS+MIVILND++  SL     + P   + AL
Sbjct: 203 GKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPVPPVGAL 262

Query: 272 SSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEELGLY 331
           SS LS++QSS+  R+LREVAKG+TK+IG  +HE AAKVDEYARGMI   GS+LFEELGLY
Sbjct: 263 SSALSKLQSSRPLRELREVAKGVTKQIGGSVHELAAKVDEYARGMISGPGSSLFEELGLY 322

Query: 332 YIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR------RAEDTQKSEAIEKQQ 385
           YIGPVDGHNI+DLI++L +V S  + GPVL+HVVTE+ R      RA D     A     
Sbjct: 323 YIGPVDGHNIDDLITILNDVKSTKTTGPVLIHVVTEKGRGYPYAERAADKYHGVAKFDPA 382

Query: 386 EGA---SDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFP 442
            G    S + +L + NY       F EAL+ EAE+D  IV +HA M     L  F  +FP
Sbjct: 383 TGKQFKSPAKTLSYTNY-------FAEALIAEAEQDSKIVAIHAAMGGGTGLNYFLRRFP 435

Query: 443 ERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITS 502
            R FDVG+AEQHAVTF+AGLAC GLKPFC I S+FLQR YDQVV+DVD Q+LPVRF +  
Sbjct: 436 SRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDR 495

Query: 503 AGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYPRGA 562
           AGLVG+DGPT CGAFD+ +M+CLPNM+VMAPSDE EL  MVAT A+IDDRP CFRYPRG 
Sbjct: 496 AGLVGADGPTHCGAFDVAYMACLPNMVVMAPSDEAELCHMVATAAAIDDRPSCFRYPRGN 555

Query: 563 IVRTDL-PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADA 621
            V   L P Y+G P+E+GKG++L+EG  VALLGYG+ VQ CL A +L+ + G+ VTVADA
Sbjct: 556 GVGVPLPPNYKGTPLEVGKGRILLEGDRVALLGYGSAVQYCLTAASLVQRHGLKVTVADA 615

Query: 622 RFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWRPIVLPDN 681
           RFCKPLD  L+R L ++H  LITVEEGSIGGFGSH++ F+ALDGLLD  +KWRP+VLPD 
Sbjct: 616 RFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHIAQFMALDGLLDGKLKWRPLVLPDR 675

Query: 682 YIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLLMC 721
           YI+H SP  QLA AGLT  HIAA+  ++LG+ REAL +M 
Sbjct: 676 YIDHGSPADQLAEAGLTPSHIAASVFNILGQNREALAIMA 715


>gi|256355109|ref|NP_001157805.1| deoxy xylulose synthase 1 [Zea mays]
 gi|253558917|gb|ACT32136.1| 1-deoxy-D-xylulose 5-phosphate synthase [Zea mays]
          Length = 719

 Score =  801 bits (2069), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 400/700 (57%), Positives = 505/700 (72%), Gaps = 24/700 (3%)

Query: 33  NISRELEISRINLCPSSSSITSSKLVTVSRICALPDIDDFFWDKEPTPILDLVENPLRLK 92
           ++++ L+   INL P       S  ++  R        +++  + PTP+LD +  P+ +K
Sbjct: 29  HVNKLLQARPINLKPRRRPACVSASLSSEREA------EYYSQRPPTPLLDTINYPVHMK 82

Query: 93  SLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDKILWDVGEQ 152
           +L++KEL+QLA E+RS++   VSKT   L SSL  VELTVALH+VF+AP D+ILWDVG Q
Sbjct: 83  NLSVKELRQLADELRSDVIFHVSKTGGHLGSSLGVVELTVALHYVFNAPQDRILWDVGHQ 142

Query: 153 TYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDIKG 212
           +Y HKILTGRR  + T+R+ +G++G+T R+ESEYD F  GH   ++SA LGMAV RD+KG
Sbjct: 143 SYPHKILTGRRDKMPTMRQTNGLAGFTKRAESEYDSFGTGHSSTTISAALGMAVGRDLKG 202

Query: 213 KRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH-SLHPKIEESPKTSINAL 271
            +  +V VI +G   AGQAYEAM+NAGYLDS+MIVILND++  SL     + P   + AL
Sbjct: 203 GKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPVPPVGAL 262

Query: 272 SSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEELGLY 331
           SS LS++QSS+  R+LREVAKG+T++IG  +HE AAKVDEYARGMI   GS+LFEELGLY
Sbjct: 263 SSALSKLQSSRPLRELREVAKGVTRQIGGSVHELAAKVDEYARGMISGPGSSLFEELGLY 322

Query: 332 YIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR------RAEDTQKSEAIEKQQ 385
           YIGPVDGHNI+DLI++L +V S  + GPVL+HVVTE+ R      RA D     A     
Sbjct: 323 YIGPVDGHNIDDLITILNDVKSTKTTGPVLIHVVTEKGRGYPYAERAADKYHGVAKFDPA 382

Query: 386 EGA---SDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFP 442
            G    S + +L + NY       F EAL+ EAE+D  IV +HA M     L  F  +FP
Sbjct: 383 TGKQFKSPAKTLSYTNY-------FAEALIAEAEQDSKIVAIHAAMGGGTGLNYFLRRFP 435

Query: 443 ERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITS 502
            R FDVG+AEQHAVTF+AGLAC GLKPFC I S+FLQR YDQVV+DVD Q+LPVRF +  
Sbjct: 436 NRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDR 495

Query: 503 AGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYPRGA 562
           AGLVG+DGPT CGAFD+ +M+CLPNM+VMAPSDE EL  MVAT A+IDDRP CFRYPRG 
Sbjct: 496 AGLVGADGPTHCGAFDVAYMACLPNMVVMAPSDEAELCHMVATAAAIDDRPSCFRYPRGN 555

Query: 563 IVRTDL-PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADA 621
            V   L P Y+G P+E+GKG++L+EG  VALLGYG+ VQ CL A +L+ + G+ VTVADA
Sbjct: 556 GVGVPLPPNYKGTPLEVGKGRILLEGDRVALLGYGSAVQYCLTAASLVQRHGLKVTVADA 615

Query: 622 RFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWRPIVLPDN 681
           RFCKPLD  L+R L ++H  LITVEEGSIGGFGSHV+ F+ALDGLLD  +KWRP+VLPD 
Sbjct: 616 RFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVAQFMALDGLLDGKLKWRPLVLPDR 675

Query: 682 YIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLLMC 721
           YI+H SP  QLA AGLT  HIAA+  ++LG+ REAL +M 
Sbjct: 676 YIDHGSPADQLAEAGLTPSHIAASVFNILGQNREALAIMA 715


>gi|357133711|ref|XP_003568467.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic-like [Brachypodium distachyon]
          Length = 706

 Score =  801 bits (2068), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 392/658 (59%), Positives = 489/658 (74%), Gaps = 12/658 (1%)

Query: 71  DFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVEL 130
           ++   + PTP+LD V  P+ +K+L++KEL+QL+ E+RS++   VSKT   L SSL  VEL
Sbjct: 48  EYHSQRPPTPLLDTVNYPIHMKNLSLKELQQLSDELRSDVIFHVSKTGGHLGSSLGVVEL 107

Query: 131 TVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFN 190
           TVALH+VF+ P DKILWDVG Q+Y HKILTGRR  + T+R+ +G+SG+  RSESEYD F 
Sbjct: 108 TVALHYVFNTPQDKILWDVGHQSYPHKILTGRRDKMPTMRQTNGLSGFVKRSESEYDSFG 167

Query: 191 AGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
            GH   ++SA LGMAV RD+KG +  +V VI +G   AGQAYEAM+NAGYLDS+MIVILN
Sbjct: 168 TGHSSTTISAALGMAVGRDLKGAKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 227

Query: 251 DSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKV 309
           D++  SL     + P   + ALS  LS++QSS+  R+LREVAKG+TK+IG  +HE AAKV
Sbjct: 228 DNKQVSLPTATLDGPAPPVGALSGALSKLQSSRPLRELREVAKGVTKQIGGSVHELAAKV 287

Query: 310 DEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN 369
           DEYARGMI   GS+LFEELGLYYIGPVDGHNI+DLI++L+EV    + GPVL+HVVTE+ 
Sbjct: 288 DEYARGMISGSGSSLFEELGLYYIGPVDGHNIDDLITILREVKGTKTTGPVLIHVVTEKG 347

Query: 370 R------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVV 423
           R      RA D  K   + K           P    S  Y + F EAL+ EAE+D  IV 
Sbjct: 348 RGYPYAERASD--KYHGVAKFDPATGKQFKSPAKTLS--YTNYFAEALIAEAEQDSKIVA 403

Query: 424 VHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYD 483
           +HA M     L  F  +FP R FDVG+AEQHAVTF+AGLAC GLKPFC I S+FLQR YD
Sbjct: 404 IHAAMGGGTGLNYFLRRFPNRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFLQRGYD 463

Query: 484 QVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMV 543
           QVV+DVD Q+LPVRF +  AGLVG+DGPT CGAFD+TFM+CLPNM+VMAPSDE EL++MV
Sbjct: 464 QVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMACLPNMVVMAPSDEAELLNMV 523

Query: 544 ATVASIDDRPVCFRYPRGAIVRTDL-PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNC 602
           AT A+IDDRP CFRYPRG  +   L P Y+GIP+E+GKG++L+EG+ VALLGYG+ VQ C
Sbjct: 524 ATAAAIDDRPSCFRYPRGNGIGVPLPPNYKGIPLEVGKGRILMEGERVALLGYGSAVQYC 583

Query: 603 LKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIA 662
           + A +++ + G+ VTVADARFCKPLD  L+R L ++H  +ITVEEGSIGGFGSHV+ F+A
Sbjct: 584 VAASSIVEEHGLRVTVADARFCKPLDHALIRSLAKSHEVIITVEEGSIGGFGSHVAQFMA 643

Query: 663 LDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLLM 720
           LDGLLD  +KWRP+VLPD YI+H SP  QL  AGLT  HIAAT  ++LG+ REAL +M
Sbjct: 644 LDGLLDGKLKWRPVVLPDKYIDHGSPADQLVEAGLTPSHIAATVFNILGQAREALAIM 701


>gi|351725475|ref|NP_001236070.1| 1-deoxy-D-xylulose 5-phosphate synthase 1 [Glycine max]
 gi|226536911|gb|ACO72582.1| 1-deoxy-D-xylulose 5-phosphate synthase 1 [Glycine max]
          Length = 708

 Score =  800 bits (2067), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 399/665 (60%), Positives = 503/665 (75%), Gaps = 12/665 (1%)

Query: 64  CALPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKS 123
            +L +  +++  + PTP+LD V  P+ +K+L+ KELKQLA E+RS++   VS+T   L S
Sbjct: 47  ASLSESGEYYSHRPPTPLLDTVNYPIHMKNLSAKELKQLADELRSDVIFSVSRTGGHLGS 106

Query: 124 SLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSE 183
           SL  VELTVALH+VF+AP DKILWDVG Q+Y HKILTGRR  +HT+R+ +G+SG+T RSE
Sbjct: 107 SLGVVELTVALHYVFNAPQDKILWDVGHQSYPHKILTGRRDQMHTMRQTNGLSGFTKRSE 166

Query: 184 SEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDS 243
           SE+D F  GH   ++SAGLGMAV RD+KG++  +V VI +G   AGQAYEAM+NAGYLDS
Sbjct: 167 SEFDCFGTGHSSTTISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDS 226

Query: 244 NMIVILNDSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGM 302
           +MIVILND++  SL     + P   + ALSS LSR+QS++  R+LREVAKG+TKRIG  M
Sbjct: 227 DMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKRIGGPM 286

Query: 303 HEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLV 362
           HE AAKVDEYARGMI   GS+LFEELGLYYIGPVDGHNI+DL+++L EV S  + GPVL+
Sbjct: 287 HELAAKVDEYARGMISGSGSSLFEELGLYYIGPVDGHNIDDLVAILNEVKSTKTTGPVLI 346

Query: 363 HVVTEENRRAEDTQKSEAIEKQQEGASDSNSLPFGNY------SRTYDDCFIEALVMEAE 416
           HV+TE+ R     +K+     +  G +  +  P G        +++Y   F EAL+ EAE
Sbjct: 347 HVITEKGRGYPYAEKAA---DKYHGVTKFDP-PTGKQFKSKATTQSYTTYFAEALIAEAE 402

Query: 417 KDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSA 476
            DKD+V +HA M     + LF  +FP R FDVG+AEQHAVTF+AGLAC GLKPFC I S+
Sbjct: 403 ADKDVVAIHAAMGGGTGMNLFHRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSS 462

Query: 477 FLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDE 536
           F+QRAYDQVV+DVD Q+LPVRF +  AGLVG+DGPT CG+FD+TFM+CLPNM+VMAPSDE
Sbjct: 463 FMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDE 522

Query: 537 DELVDMVATVASIDDRPVCFRYPRGAIVRTDLP-GYRGIPIEIGKGKVLVEGKDVALLGY 595
            +L  MVAT A+I+DRP CFRYPRG  +   LP G +G P+EIGKG++L+EG+ VALLGY
Sbjct: 523 ADLFHMVATAAAINDRPSCFRYPRGNGIGVQLPTGNKGTPLEIGKGRILIEGERVALLGY 582

Query: 596 GAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGS 655
           G+ VQNCL A +L+   G+ +TVADARFCKPLD  L+R L ++H  LITVEEGSIGGFGS
Sbjct: 583 GSAVQNCLAAASLVECHGLRLTVADARFCKPLDRSLIRSLAKSHEVLITVEEGSIGGFGS 642

Query: 656 HVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTRE 715
           HV+ F+ALDGLLD  +KWRPIVLPD YI+H SP  QL+LAGLT  HIAAT  ++L +TRE
Sbjct: 643 HVAQFMALDGLLDGKLKWRPIVLPDRYIDHGSPADQLSLAGLTPSHIAATVFNVLRQTRE 702

Query: 716 ALLLM 720
           AL +M
Sbjct: 703 ALEVM 707


>gi|124558735|gb|ABN13970.1| 1-deoxy-D-xylulose 5-phosphate synthase [Gossypium barbadense]
          Length = 720

 Score =  800 bits (2065), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 405/670 (60%), Positives = 502/670 (74%), Gaps = 22/670 (3%)

Query: 64  CALPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKS 123
            +L +  ++   +  TP+LD +   + +K+L++KELKQL+ E+RS++   VSKT   L S
Sbjct: 56  ASLSEGAEYHSQRPATPLLDTINYLIHMKNLSVKELKQLSEELRSDVVFNVSKTGGHLGS 115

Query: 124 SLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSE 183
           SL  VELTVALH+VF+AP DKILWDVG Q+Y HKILTGRR  +HT+R+ +G++G+T RSE
Sbjct: 116 SLGVVELTVALHYVFNAPRDKILWDVGHQSYPHKILTGRRHKMHTMRQTNGLAGFTKRSE 175

Query: 184 SEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDS 243
           SEYD F  GH   ++SAGLGMAV RD+KG+R  +V VI +G   AGQAYEAM+NAGYLDS
Sbjct: 176 SEYDCFGTGHSSTTISAGLGMAVGRDLKGERNHVVAVIGDGAMTAGQAYEAMNNAGYLDS 235

Query: 244 NMIVILNDSRHSLHPKIE-ESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGM 302
           +MIVILND++    P    + P   + ALSS LSR+QS++  R+LREVAKG+TK+IG  M
Sbjct: 236 DMIVILNDNKQVSLPTANLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPM 295

Query: 303 HEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLV 362
           HE AAKVDEYARGMI   GSTLFEELGLYYIGPVDGHNI+DL+S+L+EV +  + GPVL+
Sbjct: 296 HELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDLVSILKEVKTTKTTGPVLI 355

Query: 363 HVVTEENR------RAED-----TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEAL 411
           HVVTE+ R      RA D      +   A  KQ +G S + S         Y   F EAL
Sbjct: 356 HVVTEKGRGYPYAERAADKYHGVVKFDPATGKQFKGNSATQS---------YTTYFAEAL 406

Query: 412 VMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFC 471
           + EAE DK+IV +HA M     L LF  +FP+R FDVG+AEQHAVTF+AGLAC GLKPFC
Sbjct: 407 IAEAEADKNIVAIHAAMGGGTGLNLFLRRFPQRCFDVGIAEQHAVTFAAGLACEGLKPFC 466

Query: 472 IIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVM 531
            I S+F+QRAYDQVV+DVD Q+LPVRF +  AGLVG+DGPT CGAFD+TFM+CLPNM+VM
Sbjct: 467 AIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMACLPNMVVM 526

Query: 532 APSDEDELVDMVATVASIDDRPVCFRYPRGAIVRTDL-PGYRGIPIEIGKGKVLVEGKDV 590
           APSDE EL  MVAT A+IDDRP CFRYPRG  +   L PG +G+P+E+GKG+VL+EG+ V
Sbjct: 527 APSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVQLPPGKKGVPLEVGKGRVLIEGERV 586

Query: 591 ALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI 650
           ALLGYG+ VQ+CL A +LL   G+ +TVADARFCKPLD  L+R+L ++H  LITVEEGSI
Sbjct: 587 ALLGYGSAVQSCLAAASLLESHGLRLTVADARFCKPLDHALIRKLAKSHEVLITVEEGSI 646

Query: 651 GGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
           GGFGSHV+ F+ALDGLLD  VKWRP+VLPD YI+H SP  QLA AGLT  HIAAT  ++L
Sbjct: 647 GGFGSHVAQFLALDGLLDGKVKWRPLVLPDRYIDHGSPVDQLAEAGLTPSHIAATVFNVL 706

Query: 711 GRTREALLLM 720
            + REAL +M
Sbjct: 707 EQKREALEVM 716


>gi|46361691|gb|AAS89341.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ginkgo biloba]
          Length = 717

 Score =  799 bits (2063), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 404/682 (59%), Positives = 506/682 (74%), Gaps = 24/682 (3%)

Query: 54  SSKLVTVSRICALPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSI 113
           S + V  +   AL +  +++ +K PTP+LD +  P+ +K+L+++ELKQLA E+R++L   
Sbjct: 44  SRRKVGKAYAAALSEKGEYYSEKPPTPLLDTINYPIHMKNLSLRELKQLADELRADLIFD 103

Query: 114 VSKTEKSLKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKD 173
           VS+T   L SSL  +ELTVA+H+VF+AP DKI WDVG Q Y HKILTGRR  + TLR+ +
Sbjct: 104 VSRTGGHLGSSLGVIELTVAIHYVFNAPEDKIFWDVGHQAYPHKILTGRRDKMPTLRQTN 163

Query: 174 GISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYE 233
           G+SG+T RSESEYD F AGH   S+SAGLGMAV RD+KG+   +++VI +G   AGQAYE
Sbjct: 164 GLSGFTKRSESEYDSFGAGHSSTSISAGLGMAVGRDLKGRNNHVISVIGDGAMTAGQAYE 223

Query: 234 AMSNAGYLDSNMIVILNDSRHSLHPKIE-ESPKTSINALSSTLSRIQSSKSFRQLREVAK 292
           AM+NAGYLDSNMIVILND++    P    + P   + ALSS LSR+QSS+  R+LREVAK
Sbjct: 224 AMNNAGYLDSNMIVILNDNKQVSLPTANLDGPIPPVGALSSALSRLQSSRPLRELREVAK 283

Query: 293 GMTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVA 352
           G+TK++G  MHE AAKVDEYARGMI    STLFEE+GLYYIGPVDGHNI+DL+++L+EV 
Sbjct: 284 GVTKQLGGSMHELAAKVDEYARGMISGSRSTLFEEMGLYYIGPVDGHNIDDLVTILREVK 343

Query: 353 SLGSMGPVLVHVVTEENR------RAED-----TQKSEAIEKQQEGASDSNSLPFGNYSR 401
           +  + GPVL+HVVTE+ R      RA D      +   A  KQ +G + + S        
Sbjct: 344 ATHTTGPVLIHVVTEKGRGYPYAERAADKYHGVVKFDPATGKQFKGKAQTQS-------- 395

Query: 402 TYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAG 461
            Y   F EAL+ EAE DK+IV +HA M     L +F ++FP R FDVG+AEQHAVTF+AG
Sbjct: 396 -YTTYFAEALIAEAEVDKNIVAIHAAMGGGTGLNMFLKRFPSRCFDVGIAEQHAVTFAAG 454

Query: 462 LACGGLKPFCIIPSAFLQRAYDQVVNDVDQ--QRLPVRFVITSAGLVGSDGPTQCGAFDI 519
           LAC GLKPFC I S+FLQRAYDQVV+DVD   Q+LPVRF +  AGLVG+DGPT CGAFD+
Sbjct: 455 LACEGLKPFCAIYSSFLQRAYDQVVHDVDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDV 514

Query: 520 TFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYPRGAIVRTDLP-GYRGIPIEI 578
           T++SCLPNM+VMAPSDE EL  MVAT A+IDDRP CFRYPRG  +   LP G +G+P+E+
Sbjct: 515 TYLSCLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVQLPIGNKGVPLEV 574

Query: 579 GKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQN 638
           GKG++L EG  VALLGYG +VQNCL A ALL + G+ +TVADARFCKPLD  L+R L + 
Sbjct: 575 GKGRILAEGDRVALLGYGTVVQNCLAAGALLEEQGLSLTVADARFCKPLDRDLIRSLARE 634

Query: 639 HTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLT 698
           H  LITVEEGSIGGFGSHVS F++LDGLLD  +KWRP+VLPD YIEH +P  Q+A AGLT
Sbjct: 635 HEVLITVEEGSIGGFGSHVSQFLSLDGLLDGKLKWRPLVLPDRYIEHGAPIDQMADAGLT 694

Query: 699 GHHIAATALSLLGRTREALLLM 720
             HIAA+ L++LGRTR+A  +M
Sbjct: 695 ASHIAASVLNILGRTRDAPQIM 716


>gi|326491509|dbj|BAJ94232.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326510627|dbj|BAJ87530.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 712

 Score =  799 bits (2063), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/658 (59%), Positives = 490/658 (74%), Gaps = 12/658 (1%)

Query: 71  DFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVEL 130
           ++   + PTP+LD V  P+ +K+L++KEL+QL+ E+RS++   VSKT   L SSL  VEL
Sbjct: 54  EYHSQRPPTPLLDTVNYPIHMKNLSLKELQQLSDELRSDVIFHVSKTGGHLGSSLGVVEL 113

Query: 131 TVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFN 190
           TVALH+VF+ P DK+LWDVG Q+Y HKILTGRR  + T+R+ +G+SG+  RSESEYD F 
Sbjct: 114 TVALHYVFNTPQDKLLWDVGHQSYPHKILTGRRDKMPTMRQTNGLSGFIKRSESEYDSFG 173

Query: 191 AGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
            GH   ++SA LGMAV RD+KG +  +V VI +G   AGQAYEAM+NAGYLDS+MIVILN
Sbjct: 174 TGHSSTTISAALGMAVGRDLKGAKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 233

Query: 251 DSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKV 309
           D++  SL     + P   + ALS  LS++QSS+  R+LREVAKG+TK+IG  +HE AAKV
Sbjct: 234 DNKQVSLPTATLDGPAPPVGALSGALSKLQSSRPLRELREVAKGVTKQIGGSVHEIAAKV 293

Query: 310 DEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN 369
           DEYARGMI   GS+LFEELGLYYIGPVDGHNI+DLI++L+EV    + GPVL+HV+TE+ 
Sbjct: 294 DEYARGMISGSGSSLFEELGLYYIGPVDGHNIDDLITILREVKGTKTTGPVLIHVITEKG 353

Query: 370 R------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVV 423
           R      RA D  K   + K          +P    S  Y + F EAL+ EAE+D  IV 
Sbjct: 354 RGYPYAERASD--KYHGVAKFDPATGKQFKVPAKTLS--YTNYFAEALIAEAEQDSKIVA 409

Query: 424 VHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYD 483
           +HA M     L  F  +FP R FDVG+AEQHAVTF+AGLAC GLKPFC I S+FLQR YD
Sbjct: 410 IHAAMGGGTGLNYFLRRFPNRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFLQRGYD 469

Query: 484 QVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMV 543
           QVV+DVD Q+LPVRF +  AGLVG+DGPT CGAFD+TFM+CLPNM+VMAPSDE EL++MV
Sbjct: 470 QVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMACLPNMVVMAPSDEAELLNMV 529

Query: 544 ATVASIDDRPVCFRYPRGAIVRTDLP-GYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNC 602
           AT A+IDDRP CFRYPRG  +   LP  Y+G  IE+GKG++++EG+ VALLGYG+ VQ C
Sbjct: 530 ATAAAIDDRPSCFRYPRGNGIGVPLPENYKGTAIEVGKGRIMIEGERVALLGYGSAVQYC 589

Query: 603 LKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIA 662
           + A +++++ G+ VTVADARFCKPLD  L+R L ++H  +ITVEEGSIGGFGSHV+ F+A
Sbjct: 590 MAASSIVAQHGLRVTVADARFCKPLDHALIRSLAKSHEVIITVEEGSIGGFGSHVAQFMA 649

Query: 663 LDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLLM 720
           LDGLLD  +KWRP+VLPD YI+H SP  QLA AGLT  HIAAT  ++LG+ REAL +M
Sbjct: 650 LDGLLDGKLKWRPVVLPDKYIDHGSPADQLAEAGLTPSHIAATVFNILGQAREALAIM 707


>gi|242090511|ref|XP_002441088.1| hypothetical protein SORBIDRAFT_09g020140 [Sorghum bicolor]
 gi|241946373|gb|EES19518.1| hypothetical protein SORBIDRAFT_09g020140 [Sorghum bicolor]
          Length = 722

 Score =  798 bits (2062), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 392/662 (59%), Positives = 491/662 (74%), Gaps = 18/662 (2%)

Query: 71  DFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVEL 130
           +++  + PTP+LD +  P+ +K+L++KEL+QLA E+RS++   VSKT   L SSL  VEL
Sbjct: 64  EYYSQRPPTPLLDTINYPVHMKNLSVKELRQLADELRSDVIFHVSKTGGHLGSSLGVVEL 123

Query: 131 TVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFN 190
           TVALH+VF+AP D+ILWDVG Q+Y HKILTGRR  + T+R+ +G++G+T R+ESEYD F 
Sbjct: 124 TVALHYVFNAPQDRILWDVGHQSYPHKILTGRRDKMPTMRQTNGLAGFTKRAESEYDSFG 183

Query: 191 AGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
            GH   ++SA LGMAV RD+KG +  +V VI +G   AGQAYEAM+NAGYLDS+MIVILN
Sbjct: 184 TGHSSTTISAALGMAVGRDLKGGKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 243

Query: 251 DSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKV 309
           D++  SL     + P   + ALSS LS++QSS+  R+LREVAKG+TK+IG  +HE AAKV
Sbjct: 244 DNKQVSLPTATLDGPVPPVGALSSALSKLQSSRPLRELREVAKGVTKQIGGSVHELAAKV 303

Query: 310 DEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN 369
           DEYARGMI   GS+LFEELGLYYIGPVDGHNI+DLI++L +V S  + GPVL+HVVTE+ 
Sbjct: 304 DEYARGMISGPGSSLFEELGLYYIGPVDGHNIDDLITILNDVKSTKTTGPVLIHVVTEKG 363

Query: 370 R------RAEDTQKSEAIEKQQEGA---SDSNSLPFGNYSRTYDDCFIEALVMEAEKDKD 420
           R      RA D     A      G    S + +L + NY       F E+L+ EAE+D  
Sbjct: 364 RGYPYAERAADKYHGVAKFDPATGKQFKSPAKTLSYTNY-------FAESLIAEAEQDSK 416

Query: 421 IVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQR 480
           IV +HA M     L  F  +FP R FDVG+AEQHAVTF+AGLAC GLKPFC I S+FLQR
Sbjct: 417 IVAIHAAMGGGTGLNYFLRRFPSRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFLQR 476

Query: 481 AYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELV 540
            YDQVV+DVD Q+LPVRF +  AGLVG+DGPT CGAFD+ +M+CLPNM+VMAPSDE EL 
Sbjct: 477 GYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVAYMACLPNMVVMAPSDEAELC 536

Query: 541 DMVATVASIDDRPVCFRYPRGAIVRTDL-PGYRGIPIEIGKGKVLVEGKDVALLGYGAMV 599
            MVAT A+IDDRP CFRYPRG  +   L P Y+G P+E+GKG++L+EG  VALLGYG+ V
Sbjct: 537 HMVATAAAIDDRPSCFRYPRGNGIGVPLPPNYKGTPLEVGKGRILMEGDRVALLGYGSAV 596

Query: 600 QNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSH 659
           Q CL A +L+ + G+ VTVADARFCKPLD  L+R L ++H  +ITVEEGSIGGFGSHV+ 
Sbjct: 597 QYCLAAASLVERHGLRVTVADARFCKPLDHALIRSLARSHEVIITVEEGSIGGFGSHVAQ 656

Query: 660 FIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLL 719
           F+ALDGLLD  +KWRP+VLPD YI+H SP  QLA AGLT  HIAAT  ++LG+ REAL +
Sbjct: 657 FMALDGLLDGKLKWRPLVLPDRYIDHGSPADQLAEAGLTPSHIAATVFNILGQNREALAI 716

Query: 720 MC 721
           M 
Sbjct: 717 MA 718


>gi|408833344|gb|AFU93068.1| chloroplast 1-deoxy-D-xylulose-5-phosphate synthase [Eucommia
           ulmoides]
          Length = 712

 Score =  797 bits (2058), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 398/680 (58%), Positives = 508/680 (74%), Gaps = 20/680 (2%)

Query: 53  TSSKLVTVSRICALPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSS 112
           T  K  ++    +L +  ++   + PTP+LD +  P+ +K+L+IKELKQLA E+RS++  
Sbjct: 40  TQLKKRSIGVWASLSETGEYHSKRPPTPLLDTINYPIHMKNLSIKELKQLAEEVRSDVIF 99

Query: 113 IVSKTEKSLKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKK 172
            VSKT   L SSL  VELTVALH+VF+AP D+ILWDVG Q+Y HKILTGRR  +HT+R+ 
Sbjct: 100 NVSKTGGHLGSSLGVVELTVALHYVFNAPKDRILWDVGHQSYPHKILTGRRDKMHTIRQT 159

Query: 173 DGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAY 232
           +G++G+T RSESEYD F  GH   ++SAGLGMAV RD+K ++  +V+VI +G   AGQAY
Sbjct: 160 NGLAGFTKRSESEYDCFGTGHSSTTISAGLGMAVGRDLKRRKNNVVSVIGDGAMTAGQAY 219

Query: 233 EAMSNAGYLDSNMIVILNDSRHSLHPKIE-ESPKTSINALSSTLSRIQSSKSFRQLREVA 291
           EAM+NAGYLDS+MIVILND++    P    + P   + ALSS LSR+QS++  R+LREVA
Sbjct: 220 EAMNNAGYLDSDMIVILNDNKQVSLPTANLDGPIPPVGALSSALSRLQSNRPLRELREVA 279

Query: 292 KGMTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEV 351
           KG+TK+IG  MH+ A+KVDEYARG+I   GSTLFEELGLYYIGPVDGH+I+DL+++L+EV
Sbjct: 280 KGVTKQIGWPMHDLASKVDEYARGLISGSGSTLFEELGLYYIGPVDGHSIDDLVAILKEV 339

Query: 352 ASLGSMGPVLVHVVTEENR------RAEDTQ----KSEAIEKQQEGASDSNSLPFGNYSR 401
            S  + GPVL+HVVTE+ R      +A D      K +    QQ  AS          ++
Sbjct: 340 KSTRTTGPVLIHVVTEKGRGYPYAEKAADKYHGVVKFDPATGQQFKASVK--------TQ 391

Query: 402 TYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAG 461
           ++   F EAL+ EAE DKD+V +HA M     L LF  +FP R FDVG+AEQHAVTF+AG
Sbjct: 392 SFTTYFAEALIAEAEADKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 451

Query: 462 LACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITF 521
           LAC GLKPFC I S+F+QRAYDQVV+DVD Q+LPVRF +  AGLVG+DGPT CGAFD+TF
Sbjct: 452 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTF 511

Query: 522 MSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYPRGAIVRTDL-PGYRGIPIEIGK 580
           M+CLPNM+VMAPSDE EL  MVAT A+IDDRP CFRYPRG  +  DL PG +G+P+E+GK
Sbjct: 512 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVDLPPGNKGVPLEVGK 571

Query: 581 GKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHT 640
           G++L+EG+ VALLGYG  V++CL A +++   G+++TV DARFCKPLD  L+R L ++H 
Sbjct: 572 GRILIEGERVALLGYGTAVRSCLAAASIVKPRGLNLTVVDARFCKPLDCSLIRSLAKSHE 631

Query: 641 FLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGH 700
           FLITVEEGSIGGFGSHV+HF+ALDGLLD  +KWRP+VLPD YI+H SP  QL  AGLT  
Sbjct: 632 FLITVEEGSIGGFGSHVAHFLALDGLLDGNLKWRPLVLPDRYIDHGSPADQLTEAGLTPS 691

Query: 701 HIAATALSLLGRTREALLLM 720
           HIAAT  ++LG+TR AL +M
Sbjct: 692 HIAATVFNILGKTRGALEIM 711


>gi|215478268|gb|ACJ67021.1| 1-deoxy-D-xylulose 5-phosphate synthase type I [Pinus taeda]
          Length = 707

 Score =  793 bits (2047), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/678 (57%), Positives = 498/678 (73%), Gaps = 16/678 (2%)

Query: 51  SITSSKLVTVSRICALPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSEL 110
           S+   + V  +   AL D  +++ +K PTP+LD +  P+ +K+L+I+ELKQL+ E+RS++
Sbjct: 37  SMKLGRRVGKAYASALSDQGEYYSEKPPTPLLDTINYPIHMKNLSIRELKQLSNELRSDI 96

Query: 111 SSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLR 170
              V++T   L ++L  V+LTVALH+VF+ P DKI+WDVG Q+Y +KILTGRRS + TLR
Sbjct: 97  IFDVAETGGHLSANLGVVDLTVALHYVFNTPHDKIVWDVGHQSYPYKILTGRRSKMSTLR 156

Query: 171 KKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQ 230
           +  GI+G+  R ESE+D F AGH   S+SA +GMAV RD+ GK   ++ VI +G   AGQ
Sbjct: 157 QTSGIAGFPRRVESEHDAFGAGHSSTSISAAVGMAVGRDLLGKHNHVIGVIGDGAMTAGQ 216

Query: 231 AYEAMSNAGYLDSNMIVILNDSRHSLHPKIE-ESPKTSINALSSTLSRIQSSKSFRQLRE 289
           AYEAM+NAG+LDSNMIVILND++    P    + P   + ALS    ++QSSK  R+LRE
Sbjct: 217 AYEAMNNAGFLDSNMIVILNDNKQVSLPTANLDGPIPPVGALS----KLQSSKPLRELRE 272

Query: 290 VAKGMTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQ 349
           VAKG+TK++G  MHE AAKVDEYARGMI    STLFEELGLYYIGPVDGHNI+DL+++L+
Sbjct: 273 VAKGVTKQLGAPMHELAAKVDEYARGMISGSRSTLFEELGLYYIGPVDGHNIDDLLTILR 332

Query: 350 EVASLGSMGPVLVHVVTEENR------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTY 403
           EV +  + GPVL+HVVTE+ R      RA D            G       P    ++TY
Sbjct: 333 EVKATHTTGPVLIHVVTEKGRGYPYAERAADKYHGVVKFDPATGKQFKGKAP----TQTY 388

Query: 404 DDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLA 463
              F EAL+ EAE DK+IV +HA M     L +F ++FP R FDVG+AEQHAVTF+AGLA
Sbjct: 389 TTYFAEALISEAEADKNIVAIHAAMGGGTGLNMFSKRFPTRCFDVGIAEQHAVTFAAGLA 448

Query: 464 CGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMS 523
           C GLKPFC I S+FLQRAYDQV++DVD Q+LPVRF +  AGLVG+DGPT CGAFD+T+++
Sbjct: 449 CEGLKPFCAIYSSFLQRAYDQVIHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTYLA 508

Query: 524 CLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYPRGAIVRTDL-PGYRGIPIEIGKGK 582
           CLPNM+VMAPS+E EL  MVAT A+IDDRP CFR+PRG  V   L PG +G+P+EIGKG+
Sbjct: 509 CLPNMVVMAPSNETELFHMVATAAAIDDRPSCFRFPRGNGVGAQLPPGNKGVPLEIGKGR 568

Query: 583 VLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFL 642
           +LVEG  VALLGYG +VQNCL A ALL +  + VTVADARFCKPLD  L+R L + H  L
Sbjct: 569 ILVEGDRVALLGYGTVVQNCLAASALLEEQDLSVTVADARFCKPLDRDLIRSLAREHEVL 628

Query: 643 ITVEEGSIGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHI 702
           ITVEEG+IGGFGSHV+HF+ALDG LD  +KWRP+VLPD+YIEH +P+ Q+  AGLT  HI
Sbjct: 629 ITVEEGTIGGFGSHVAHFLALDGFLDGKLKWRPMVLPDHYIEHGAPSDQMIEAGLTASHI 688

Query: 703 AATALSLLGRTREALLLM 720
           AA+ L++LGRTREAL +M
Sbjct: 689 AASVLNVLGRTREALQVM 706


>gi|357447515|ref|XP_003594033.1| 1-deoxy-D-xylulose 5-phosphate synthase [Medicago truncatula]
 gi|355483081|gb|AES64284.1| 1-deoxy-D-xylulose 5-phosphate synthase [Medicago truncatula]
          Length = 718

 Score =  790 bits (2039), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 393/686 (57%), Positives = 505/686 (73%), Gaps = 21/686 (3%)

Query: 48  SSSSITSSKLVTVSRI----CA-LPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQL 102
           +S  I+  KL  V +I    CA + +  ++ ++++PTP+LD +  P+ +K+L+ KELKQL
Sbjct: 37  ASDLISHHKLNQVRKIPYGVCASISETGEYHYERQPTPLLDTINYPIHMKNLSNKELKQL 96

Query: 103 AVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGR 162
           A E+RS++   VS+T   L S+L  VELTVALH+VF+AP+DKILWDVG Q+Y HKILTGR
Sbjct: 97  ACELRSDIIFSVSQTGGHLGSNLGVVELTVALHYVFNAPIDKILWDVGHQSYPHKILTGR 156

Query: 163 RSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVIS 222
           R+ +HTLR+KDG+SG+T RSESE+D F  GH   ++SAGLGMAV RD+KG++  +VT+I 
Sbjct: 157 RNKMHTLRQKDGLSGFTKRSESEFDIFGTGHSSTTISAGLGMAVGRDLKGEKHNVVTIIG 216

Query: 223 NGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKIE-ESPKTSINALSSTLSRIQSS 281
           +G   AGQA+EAM+NAGYL+SNMIVILND++    P  + + P   + ALS TLSR+QS+
Sbjct: 217 DGAMTAGQAFEAMNNAGYLNSNMIVILNDNKQVSLPTADLDGPIPPVGALSRTLSRLQSN 276

Query: 282 KSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNI 341
              R+LREVAKG+TK+ GR +    AKV+EYA GMI   GSTLFEELGL YIGPVDGH+I
Sbjct: 277 IPLRELREVAKGVTKQNGRPI----AKVEEYALGMISGSGSTLFEELGLDYIGPVDGHSI 332

Query: 342 EDLISVLQEVASLGSMGPVLVHVVTEEN------RRAEDTQKSEAIEKQQEGASDSNSLP 395
           +DL+++L++V S    GPVL+HVVTE+        +A D     A      G       P
Sbjct: 333 DDLVAILKQVKSPKKTGPVLIHVVTEKGLGYSYAEKAADKYHGVAKFDPATGKQFKTKAP 392

Query: 396 FGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHA 455
               +     CF++AL+ EAE DK IV +HA M     +  F  +FP R FDVG+AEQHA
Sbjct: 393 ----TPVLTSCFVDALIAEAEADKGIVGIHAAMGGGTGMNHFLRRFPTRCFDVGIAEQHA 448

Query: 456 VTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCG 515
           VTF+AGLAC GLKPFC I S+FLQRAYDQVV+DVD Q+LPVRFVI  AG VG DGPT CG
Sbjct: 449 VTFAAGLACEGLKPFCAIYSSFLQRAYDQVVHDVDLQKLPVRFVIDKAGFVGEDGPTHCG 508

Query: 516 AFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYPRGAIVRTDL-PGYRGI 574
           +FD+T+M+CLPNM+VMAPSDE E++ MVAT  +I+DRP CFR+PR      +L PG RGI
Sbjct: 509 SFDVTYMACLPNMVVMAPSDEAEIIHMVATAVAINDRPSCFRFPRANGTGVELPPGNRGI 568

Query: 575 PIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRE 634
           P+EIGKG++L+EG+ VALLG+G  VQNC+ A ++L   G+ VTVADARFCKPLD  L+R 
Sbjct: 569 PMEIGKGRILIEGERVALLGFGTAVQNCVAAASMLEDHGLRVTVADARFCKPLDHSLIRS 628

Query: 635 LCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLAL 694
           L ++H  LITVEEGSIGGFGSHV+ F+ALDGLLD  +KWRP+V PD YI+H SP +QLA+
Sbjct: 629 LAKSHEVLITVEEGSIGGFGSHVAQFMALDGLLDGKLKWRPMVFPDIYIDHGSPAEQLAV 688

Query: 695 AGLTGHHIAATALSLLGRTREALLLM 720
           AGLT  HIAAT  ++LG+TREAL +M
Sbjct: 689 AGLTSSHIAATVFNILGQTREALEVM 714


>gi|8000868|gb|AAD56390.2|AF182286_1 1-deoxy-D-xylulose-5-phosphate synthase [Artemisia annua]
          Length = 713

 Score =  788 bits (2034), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/663 (58%), Positives = 495/663 (74%), Gaps = 12/663 (1%)

Query: 66  LPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSL 125
           L +  ++   + PTP+LD +  P+ +K+L++KELKQLA E+RS++   VSKT   L SSL
Sbjct: 54  LSERGEYHSQRPPTPLLDTINYPIHMKNLSVKELKQLADELRSDVIFNVSKTGGHLGSSL 113

Query: 126 AAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESE 185
             VELTVALH+VF+ P DKILWDVG Q+Y HKILTGRR  +HT+R+ +G++G+T RSESE
Sbjct: 114 GVVELTVALHYVFNTPQDKILWDVGHQSYPHKILTGRRDQMHTIRQTNGLAGFTKRSESE 173

Query: 186 YDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNM 245
           +D F  GH   ++SAGLGMAV RD+KG    +V +I +G   AGQAYEAM+NAGYLDS+M
Sbjct: 174 HDCFGTGHSSTTISAGLGMAVGRDLKGGTNDVVAIIGDGAMTAGQAYEAMNNAGYLDSDM 233

Query: 246 IVILNDSRHSLHPKIE-ESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHE 304
           IVILND++    P    + P   + ALSS LSR+QS++  R+LREVAK +TK+IG  MHE
Sbjct: 234 IVILNDNKQVSLPTANLDGPIPPVGALSSALSRLQSNRPLRELREVAKEVTKQIGGPMHE 293

Query: 305 WAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHV 364
            AAKVDEYARGMI   GSTLFEELGLYYIGPVDGH+I+DL+++L+EV S  + GPVL+HV
Sbjct: 294 LAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHSIDDLVAILKEVKSTKTTGPVLIHV 353

Query: 365 VTEENR------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKD 418
           +TE+ R      +A D            G    +S P    +++Y   F EAL+ EAE D
Sbjct: 354 ITEKGRGYPYAEKAADKYHGVGKFDPATGKQFKSSAP----TQSYTTYFAEALIAEAEAD 409

Query: 419 KDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFL 478
           K IV +HA M     + LF  +FP R FDVG+AEQHAVTF+AGLAC GLKPFC I S+FL
Sbjct: 410 KKIVGIHAAMGGGTGMNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFL 469

Query: 479 QRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDE 538
           QR YDQVV+DVD Q+LPVRF +  AGLVG+DGPT  G+FD+TFM+CLPNM+VMAPSDE E
Sbjct: 470 QRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHSGSFDVTFMACLPNMVVMAPSDEAE 529

Query: 539 LVDMVATVASIDDRPVCFRYPRGAIVRTDL-PGYRGIPIEIGKGKVLVEGKDVALLGYGA 597
           L +MVAT A+IDDRP CFRYPRG  +   L PG +G+P+E+GKG++++EG+ VALLGYG 
Sbjct: 530 LFNMVATAAAIDDRPSCFRYPRGNGIGVPLPPGNKGVPLEVGKGRIMLEGQRVALLGYGT 589

Query: 598 MVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHV 657
            VQ+C+ A  ++ + G+++TVADARFCKPLD  L+R L + H  LITVEEGSIGGFGSHV
Sbjct: 590 AVQSCMAAATIVQERGLNITVADARFCKPLDHSLIRALAKTHEVLITVEEGSIGGFGSHV 649

Query: 658 SHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREAL 717
           +HF+ALDGLLD  +KWRP+VLPD YI+H +P  QLA AGLT  HIAAT  ++LG+TREAL
Sbjct: 650 AHFLALDGLLDGNLKWRPLVLPDRYIDHGAPADQLAEAGLTPSHIAATVFNVLGQTREAL 709

Query: 718 LLM 720
            +M
Sbjct: 710 EVM 712


>gi|356529695|ref|XP_003533424.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic-like [Glycine max]
          Length = 712

 Score =  780 bits (2014), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/655 (58%), Positives = 480/655 (73%), Gaps = 10/655 (1%)

Query: 72  FFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELT 131
           F   K  TP+LD +  P  +K+L++++L+QLA E+R+++   VS T   L SSL  VELT
Sbjct: 60  FSSQKPATPLLDTINYPAHMKNLSLQDLEQLAAELRADVVHSVSNTGGHLSSSLGVVELT 119

Query: 132 VALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNA 191
           VALHHVF+ P DKI+WDVG Q Y HKILTGRRS +HT+RK  G++G+  R ES YD F  
Sbjct: 120 VALHHVFNTPEDKIIWDVGHQAYPHKILTGRRSRMHTIRKTSGLAGFPKREESVYDVFGT 179

Query: 192 GHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILND 251
           GH   S+SAGLGMAVARD+ GK+  IV+VI +G   AGQAYEAM+NAG+LDSNMI+ILND
Sbjct: 180 GHSSTSISAGLGMAVARDLLGKKNSIVSVIGDGAMTAGQAYEAMNNAGFLDSNMIIILND 239

Query: 252 SRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVD 310
           ++  SL     + P T + ALSS LS+IQ+S  FR+LRE AKG+TK+IG   H+ AAKVD
Sbjct: 240 NKQVSLPTATIDGPATPVGALSSALSKIQASTKFRKLREAAKGITKQIGGTTHQLAAKVD 299

Query: 311 EYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR 370
           EYARGMI   GSTLFEELGLYYIGPVDGHNIEDL+++L++V  + + GP L+HVVTE   
Sbjct: 300 EYARGMISGSGSTLFEELGLYYIGPVDGHNIEDLVTILEKVKEMPAPGPTLIHVVTE--- 356

Query: 371 RAEDTQKSEAIEKQQEGA-----SDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVH 425
           + +    +E    +  G      +  + L   + + TY   F E+L+ EAE D  IV +H
Sbjct: 357 KGKGYPPAEVAADKMHGVVKFVPTSGHQLKPKSSTLTYTQYFAESLIKEAEIDNKIVAIH 416

Query: 426 AGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQV 485
           A M     L  F ++FP+R FDVG+AEQHAVTF+AGLA  GLKPFC I S+FLQR YDQV
Sbjct: 417 AAMGGGTGLNYFHKRFPDRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRGYDQV 476

Query: 486 VNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVAT 545
           V+DVD Q+LPVRF +  AGLVG+DGPT CGAFDIT+M+CLPNM+VMAPSDE EL+ MVAT
Sbjct: 477 VHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITYMACLPNMVVMAPSDEAELMHMVAT 536

Query: 546 VASIDDRPVCFRYPRGAIVRTDLP-GYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLK 604
            A+IDDRP CFR+PRG  +   LP   +G P+EIGKG++L +G  VA+LGYG++VQ CL+
Sbjct: 537 AAAIDDRPSCFRFPRGNGIGASLPLNNKGTPLEIGKGRILRQGSRVAILGYGSVVQQCLQ 596

Query: 605 ARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALD 664
           A  +L  L I VTVADARFCKPLD  L++ L + H FL+TVEEGSIGGFGSHVSHF+++ 
Sbjct: 597 AAQMLKPLDISVTVADARFCKPLDTDLIKLLGKEHEFLLTVEEGSIGGFGSHVSHFLSIV 656

Query: 665 GLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLL 719
           GLLD  +KWRP++LPD YIEH SP  Q   AGL+  +IAAT LSLL R +EALL 
Sbjct: 657 GLLDGPLKWRPMMLPDRYIEHGSPQDQTEEAGLSSKNIAATVLSLLERPKEALLF 711


>gi|356523939|ref|XP_003530591.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic-like [Glycine max]
          Length = 714

 Score =  779 bits (2012), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/656 (58%), Positives = 484/656 (73%), Gaps = 10/656 (1%)

Query: 71  DFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVEL 130
           ++  +K  TP+LD V +P+ +K+L+ ++L+QLA E+R+++   VS+T   L SSL  VEL
Sbjct: 61  NYSGEKPATPLLDTVNHPIHMKNLSTQDLEQLAAELRADIVHSVSETGGHLSSSLGVVEL 120

Query: 131 TVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFN 190
           +VALHHVF+ P DKI+WDVG Q Y HKILTGRRS +HT+RK  G++G+  R ES +D F 
Sbjct: 121 SVALHHVFNTPEDKIIWDVGHQAYPHKILTGRRSRMHTIRKTSGLAGFPKRDESVHDAFG 180

Query: 191 AGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
            GH   S+SAGLGMAVARD+ GK   I++VI +G   AGQAYEAM+NAG+LDSNMIV+LN
Sbjct: 181 VGHSSTSISAGLGMAVARDLLGKNNSIISVIGDGALTAGQAYEAMNNAGFLDSNMIVVLN 240

Query: 251 DSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKV 309
           D++  SL     + P T + ALSS LS+IQ+S  FR+LRE AK +TK+IG   H+ AAKV
Sbjct: 241 DNKQVSLPTATLDGPATPVGALSSALSKIQASSEFRKLREAAKTITKQIGGQTHQVAAKV 300

Query: 310 DEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN 369
           DEYARGMI   GSTLFEELGLYYIGPVDGHNIEDL+++ ++V ++ + GPVL+HVVTE+ 
Sbjct: 301 DEYARGMISASGSTLFEELGLYYIGPVDGHNIEDLVTIFEKVKAMPAPGPVLIHVVTEKG 360

Query: 370 RRAEDTQKSEAIEKQQEGA-----SDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVV 424
           +     +K+     +  G         + L   + + +Y   F E+L+ EAE D  IV +
Sbjct: 361 KGYPPAEKAA---DRMHGVVKFDPKTGHQLKAKSSTLSYTQYFAESLIKEAEIDNKIVAI 417

Query: 425 HAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQ 484
           HA M     L  FQ+KFPER FDVG+AEQHAVTF+AGLA  GLKPFC I S+FLQR YDQ
Sbjct: 418 HAAMGGGTGLNYFQKKFPERCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRGYDQ 477

Query: 485 VVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVA 544
           VV+DVD Q+LPVRF +  AGLVG+DGPT CGAFDIT+MSCLPNM+VMAPSDE EL+ MVA
Sbjct: 478 VVHDVDLQKLPVRFALDRAGLVGADGPTHCGAFDITYMSCLPNMVVMAPSDETELMHMVA 537

Query: 545 TVASIDDRPVCFRYPRGAIVRTDLP-GYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCL 603
           T A+IDDRP CFR+PRG  +   LP   +G P+EIGKG++LVEG  VA+LGYG++VQ C 
Sbjct: 538 TAAAIDDRPSCFRFPRGNGIGATLPLNNKGTPLEIGKGRILVEGSRVAILGYGSVVQQCR 597

Query: 604 KARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIAL 663
           +A  +L +LGIDVTVADARFCKPLD  L+R L + H  LITVEEGSIGGFGSHVS F++L
Sbjct: 598 QASEMLKELGIDVTVADARFCKPLDTGLIRLLAKEHEILITVEEGSIGGFGSHVSQFLSL 657

Query: 664 DGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLL 719
            G+LD  +KWR ++LPD YIEH SP  Q+  AGL+   IAAT LSL+ R ++ALL 
Sbjct: 658 SGILDGPLKWRAMMLPDRYIEHGSPQVQIEEAGLSSKQIAATVLSLMERPKQALLF 713


>gi|94421690|gb|ABF18929.1| putative 1-deoxy-D-xylulose 5-phosphate synthase [Hevea
           brasiliensis]
          Length = 711

 Score =  779 bits (2011), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/655 (58%), Positives = 479/655 (73%), Gaps = 12/655 (1%)

Query: 71  DFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVEL 130
           DF  +K PTP+LD +  P+  K+L+ ++L+QLA E+R+++   VSKT   L SSL  VEL
Sbjct: 58  DFSGEKPPTPLLDTINYPVHTKNLSTQDLEQLAAELRADIVYSVSKTGGHLSSSLGVVEL 117

Query: 131 TVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFN 190
            VALHHVF  P DKI+WDVG Q Y HKILTGRRS +HT+RK  G++G+  R ES YD F 
Sbjct: 118 AVALHHVFSTPDDKIIWDVGHQAYPHKILTGRRSRMHTIRKTSGLAGFPKRDESVYDAFG 177

Query: 191 AGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
           AGH   S+SAGLGMAVARD+ GK   +++VI +G   AGQAYEAM+NAG+LD+N+IVILN
Sbjct: 178 AGHSSTSISAGLGMAVARDLLGKNNNVISVIGDGAMTAGQAYEAMNNAGFLDANLIVILN 237

Query: 251 DSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKV 309
           D++  SL     + P T + ALSS L++IQ+S  FR+LRE AK +TK+IG   H+ AAKV
Sbjct: 238 DNKQVSLPTATLDGPATPVGALSSALAKIQASTQFRKLREAAKSITKQIGGKTHQVAAKV 297

Query: 310 DEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN 369
           DEYARGMI   GSTLFEELGLYYIGPVDGHNIEDL+++ Q+V ++ + GPVL+H+VTE+ 
Sbjct: 298 DEYARGMISASGSTLFEELGLYYIGPVDGHNIEDLVTIFQKVKAMPAPGPVLIHIVTEKG 357

Query: 370 R------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVV 423
           +       A D          Q G       P    + +Y   F EAL+ EAE D  IV 
Sbjct: 358 KGYPPAEAAADKMHGVVKFDVQTGKQFKPKSP----TLSYTQYFAEALIKEAETDNKIVA 413

Query: 424 VHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYD 483
           +HA M     L  FQ++FP+R FDVG+AEQHAVTF+AGLA  GLKPFC I S+FLQR YD
Sbjct: 414 IHAAMGGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGYD 473

Query: 484 QVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMV 543
           QVV+DVD Q+LPVRF +  AGLVG+DGPT CGAFDI +M+CLPNM+VMAPSDE EL+ MV
Sbjct: 474 QVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDIAYMACLPNMVVMAPSDEAELMHMV 533

Query: 544 ATVASIDDRPVCFRYPRGAIVRTDL-PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNC 602
           AT A+IDDRP CFR+PRG  +   L P  +G P+EIGKG++L+EG  VA+LGYG++VQ C
Sbjct: 534 ATAAAIDDRPSCFRFPRGNGIGAALPPNNKGTPLEIGKGRILMEGNRVAILGYGSIVQQC 593

Query: 603 LKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIA 662
           ++A ++L   GI VTVADARFCKPLD  L+R+L + H FLITVEEGSIGGF SHVSHF++
Sbjct: 594 VEAASMLRTQGISVTVADARFCKPLDTDLIRQLAKEHEFLITVEEGSIGGFSSHVSHFLS 653

Query: 663 LDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREAL 717
           L G+LD  +K R +VLPD YI+H SP  Q+  AG++ +HI AT LSLLG+ +EAL
Sbjct: 654 LSGILDGPLKLRAMVLPDRYIDHGSPQDQIQEAGISSNHITATVLSLLGKPKEAL 708


>gi|117553508|gb|ABK35283.1| deoxyxylulose-5-phosphate synthase [Adonis aestivalis var.
           palaestina]
          Length = 717

 Score =  776 bits (2003), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 384/683 (56%), Positives = 490/683 (71%), Gaps = 15/683 (2%)

Query: 43  INLCPSSSSITSSKLVTVSRICALPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQL 102
           +  C +SS     KLV   R  + P   ++  +K  TP+LD +  P  +K+L  +EL+QL
Sbjct: 35  VKACVNSSDGQEVKLV---RQESEPLQVEYTKEKPQTPLLDTINYPPHMKNLNTQELEQL 91

Query: 103 AVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGR 162
           A E+R+++   VSKT   L SSL  VEL+VALHHVF  P DKI+WDVG Q Y HKILTGR
Sbjct: 92  AAELRADIVHSVSKTGGHLSSSLGVVELSVALHHVFSTPEDKIIWDVGHQAYPHKILTGR 151

Query: 163 RSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVIS 222
           RS +HT+R+  G++G+  R ES++D F AGH   S+SAGLGMAV RD+ GK   +++VI 
Sbjct: 152 RSKMHTIRQTSGLAGFPKRDESDHDAFGAGHSSTSISAGLGMAVGRDLLGKSNHVISVIG 211

Query: 223 NGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH-SLHPKIEESPKTSINALSSTLSRIQSS 281
           +G   AGQAYEAM+NAG+LDSN+IV+LND++  SL     + P T + ALSS LS++Q+S
Sbjct: 212 DGAMTAGQAYEAMNNAGFLDSNLIVVLNDNKQVSLPTATLDGPATPVGALSSALSKLQAS 271

Query: 282 KSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNI 341
             FR+LRE AK +TK+IG    E AAKVDEYARGM+  QGSTLFEELGLYYIGPVDGHN+
Sbjct: 272 SKFRKLREAAKKVTKQIGGQTQEIAAKVDEYARGMMSAQGSTLFEELGLYYIGPVDGHNV 331

Query: 342 EDLISVLQEVASLGSMGPVLVHVVTEENR------RAEDTQKSEAIEKQQEGASDSNSLP 395
           EDL+++ ++V +L + GPVLVH+VTE+ +       A D          + G    +  P
Sbjct: 332 EDLVTIFEKVKALPAPGPVLVHIVTEKGKGYPPAEAAADRMHGVVKFDPETGKQFKSKAP 391

Query: 396 FGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHA 455
               + +Y   F EAL+ EAE D  IV +HA M     L  FQ+KFPER FDVG+AEQHA
Sbjct: 392 ----TLSYTQYFAEALIKEAEVDSKIVAIHAAMGGGTGLNFFQKKFPERTFDVGIAEQHA 447

Query: 456 VTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCG 515
           VTF+AGLA  GLKPFC I S+FLQR YDQVV+DVD Q+LPVRF +  AGLVG+DGPT CG
Sbjct: 448 VTFAAGLATEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAVDRAGLVGADGPTHCG 507

Query: 516 AFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYPRGAIVRTDLP-GYRGI 574
           AFDIT+M+CLPNMIVMAPSDE EL+ MVAT A+IDDRP CFR+PRG  +  +LP   +G 
Sbjct: 508 AFDITYMACLPNMIVMAPSDESELIHMVATAAAIDDRPSCFRFPRGNGIGVELPLNLKGT 567

Query: 575 PIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRE 634
           P+EIGKG++L+EG  VA+LGYG++VQ C+ A  +L    I VTVADARFCKPLD +L+R 
Sbjct: 568 PVEIGKGRILMEGTRVAILGYGSIVQQCVDAAHMLKSRDIAVTVADARFCKPLDTELIRR 627

Query: 635 LCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLAL 694
           L + H +LIT+EEGSIGGFGSHV+HF++L GLLD  +K R + LPD YI+H +P  Q+  
Sbjct: 628 LAKEHEYLITIEEGSIGGFGSHVAHFLSLSGLLDGNLKLRAMALPDRYIDHGAPQDQIEE 687

Query: 695 AGLTGHHIAATALSLLGRTREAL 717
           AGL+  HI+AT LSLLGR++EAL
Sbjct: 688 AGLSSWHISATVLSLLGRSKEAL 710


>gi|225446170|ref|XP_002271585.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic [Vitis vinifera]
 gi|297735326|emb|CBI17766.3| unnamed protein product [Vitis vinifera]
          Length = 735

 Score =  776 bits (2003), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/657 (57%), Positives = 476/657 (72%), Gaps = 10/657 (1%)

Query: 71  DFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVEL 130
           +F  +K  TP+LD +  P+  K+L+I EL+ LA E+R E+   VSKT   L SSL   EL
Sbjct: 80  NFSGEKPSTPVLDTINYPIHTKNLSIGELETLAAELREEIVYTVSKTGGHLSSSLGVAEL 139

Query: 131 TVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFN 190
           T+ALHHVF+ P D+I+WDVG Q YAHKILTGRRS +HT+R+  G++G+  R ES YD F 
Sbjct: 140 TIALHHVFNTPDDRIIWDVGHQAYAHKILTGRRSRMHTIRQTCGLAGFPKRDESIYDAFG 199

Query: 191 AGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
           AGH   S+SAGLGMAV RD+ GK   +++VI +G   AGQAYEAM+NAGYLDSN+I+ILN
Sbjct: 200 AGHSSTSISAGLGMAVGRDLLGKNNHVISVIGDGAMTAGQAYEAMNNAGYLDSNLIIILN 259

Query: 251 DSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKV 309
           D+   SL     + P   + ALS  L+ +QSS+ FRQLRE AKG TK++G   HE AAKV
Sbjct: 260 DNGQVSLPTATVDGPAPPVGALSKALTNLQSSRKFRQLREAAKGFTKQVGGQAHEIAAKV 319

Query: 310 DEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN 369
           DEY RGM+G   + LFEELGLYYIGPVDGHN+EDL+ +L++V ++ + GPVLVHV+TE  
Sbjct: 320 DEYMRGMVGGSNACLFEELGLYYIGPVDGHNVEDLVHILKKVRAMPAPGPVLVHVITE-- 377

Query: 370 RRAEDTQKSEAIEKQQEG-----ASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVV 424
            + +    +E    +  G     A     L   + +R+Y   F E+L+ EAE+D++I+ +
Sbjct: 378 -KGKGYAPAEVAADKMHGVVKFDAMSGKQLKTKSKTRSYTQYFAESLIAEAERDENIIAI 436

Query: 425 HAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQ 484
           HA M     L LFQ+ FP+R FDVG+AEQHAVTF+AGLA  GLKPFC I S+FLQR +DQ
Sbjct: 437 HAAMGGGTGLNLFQKHFPDRCFDVGIAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGFDQ 496

Query: 485 VVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVA 544
           V +DVD Q+LPVRF +  AGLVG+DGPT CGAFD TFM+CLPNM+VMAPS E EL+ MVA
Sbjct: 497 VAHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDTTFMACLPNMVVMAPSCESELMHMVA 556

Query: 545 TVASIDDRPVCFRYPRGAIVRTDLP-GYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCL 603
           T A+IDDRP CFRYPRG  + + LP   +G P+EIGKG+VL EG  VA+LGYG +VQNCL
Sbjct: 557 TAAAIDDRPSCFRYPRGNGIGSILPQNNKGTPLEIGKGRVLKEGSRVAILGYGTVVQNCL 616

Query: 604 KARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIAL 663
            A  LL  LG+  TVADARFCKPLD  L+R+L Q H  LITVEEGSIGGF SHVSHF+ L
Sbjct: 617 AASKLLQVLGVSTTVADARFCKPLDGDLIRQLAQEHEVLITVEEGSIGGFSSHVSHFLGL 676

Query: 664 DGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLLM 720
           +GLLD  +KWRP++LPD YI H S T+Q+  AGL+  HIAAT LSL+G  +++L L+
Sbjct: 677 NGLLDGTLKWRPMMLPDRYINHGSQTEQVEEAGLSSRHIAATVLSLIGENKDSLHLL 733


>gi|40849969|gb|AAR95699.1| putative 1-D-deoxyxylulose 5-phosphate synthase [Ginkgo biloba]
          Length = 738

 Score =  775 bits (2001), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/653 (57%), Positives = 481/653 (73%), Gaps = 4/653 (0%)

Query: 71  DFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVEL 130
           DF  +K  TP+LD +  P+ +K+L++++L+QLA E+R+E+   VSKT   L +SL  V+L
Sbjct: 84  DFSGEKPATPLLDTINYPIHMKNLSVEDLRQLASELRAEIVFGVSKTGGHLGASLGVVDL 143

Query: 131 TVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFN 190
           TVALHHVF+ P D+I+WDVG Q Y HKILTGRRS +HT+R+  G++G+  R ESE+D F 
Sbjct: 144 TVALHHVFNTPEDRIIWDVGHQAYPHKILTGRRSRMHTIRQTSGLAGFPKRDESEHDAFG 203

Query: 191 AGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
           AGH   S+SAGLGMAV RD+ GKR  +V VI +G   AGQAYEAM+N+GYLDSNMI+ILN
Sbjct: 204 AGHSSTSISAGLGMAVGRDLLGKRNHVVAVIGDGAMTAGQAYEAMNNSGYLDSNMIIILN 263

Query: 251 DSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKV 309
           D++  SL     +     + ALSS L++ QSSK  R+LRE AK +TK+IG   HE A+KV
Sbjct: 264 DNKQVSLPTATLDGAAPPVGALSSALTKPQSSKKLRKLREAAKSLTKQIGGQTHEIASKV 323

Query: 310 DEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN 369
           DEYARGMI P GS+LFEELGLYYIGPVDGHN+ED++++L +V S+ + GPVL+H+VT++ 
Sbjct: 324 DEYARGMISPAGSSLFEELGLYYIGPVDGHNMEDMVTILDKVKSMPAPGPVLIHLVTDKG 383

Query: 370 RRAEDTQKSEAIEKQQEGASDSNSLPFGNYSRT--YDDCFIEALVMEAEKDKDIVVVHAG 427
           +     +K+            +    F + S T  Y   F +AL+ EAE+D  IV +HA 
Sbjct: 384 KGYPPAEKAADKLHGVVNFDPATGKQFKSKSSTLSYTQYFADALIAEAEEDSKIVAIHAA 443

Query: 428 MEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVN 487
           M     L  FQ++FP+R FDVG+AEQHAVTF+AG+A  GLKPFC I S FLQR YDQVV+
Sbjct: 444 MGGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGMATEGLKPFCAIYSTFLQRGYDQVVH 503

Query: 488 DVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVA 547
           DVD Q+LPVRF +  AGLVG+DGPT CGAFDIT+M+CLPNM+VMAPSDE EL+ M+AT A
Sbjct: 504 DVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITYMACLPNMVVMAPSDEAELMHMIATAA 563

Query: 548 SIDDRPVCFRYPRGAIVRTDL-PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
           +IDDRP CFR+PRG  V   L PG RGIP+EIGKG +L EG  VA+LG GA+VQNC+ AR
Sbjct: 564 AIDDRPSCFRFPRGNGVGVPLPPGNRGIPLEIGKGCILQEGSRVAILGCGAIVQNCVAAR 623

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGL 666
            LL +  I +T+ADARFCKPLD  L+R+L + H  L+TVEEG+IGGFGSHV HF+AL+GL
Sbjct: 624 MLLKEHDISITIADARFCKPLDGDLIRQLAKEHEILVTVEEGAIGGFGSHVPHFLALNGL 683

Query: 667 LDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLL 719
           LD  +KWR +VLPD YIEH SP  Q+  AGL+  HIA+T +S LGR  +AL L
Sbjct: 684 LDGNLKWRAMVLPDRYIEHGSPKDQIEEAGLSSRHIASTVMSPLGRPHDALQL 736


>gi|164604986|dbj|BAF98289.1| 1-deoxy-D-xylulose 5-phosphate synthase [Hevea brasiliensis]
          Length = 711

 Score =  774 bits (1998), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/655 (57%), Positives = 478/655 (72%), Gaps = 12/655 (1%)

Query: 71  DFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVEL 130
           DF  +K PTP+LD +  P+  K+L+ ++L+QLA E+R+++   VSKT   L SSL  VEL
Sbjct: 58  DFSGEKPPTPLLDTINYPVHTKNLSTQDLEQLAAELRADIVYSVSKTGGHLSSSLGVVEL 117

Query: 131 TVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFN 190
            VALHHVF  P DKI+WDVG Q Y HKILTGRRS +HT+RK  G++G+  R ES YD F 
Sbjct: 118 AVALHHVFSTPDDKIIWDVGHQAYPHKILTGRRSRMHTIRKTSGLAGFPKRDESVYDAFG 177

Query: 191 AGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
           AGH   S+SAGLGMAVARD+ GK   +++VI +G   AGQA+EAM+NAG+LD+N+IVILN
Sbjct: 178 AGHSSTSISAGLGMAVARDLLGKNNNVISVIGDGAMTAGQAHEAMNNAGFLDANLIVILN 237

Query: 251 DSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKV 309
           D++  SL     + P T + ALSS L++IQ+S  FR+LRE AK +TK+IG   H+ AAKV
Sbjct: 238 DNKQVSLPTATLDGPATPVGALSSALAKIQASTQFRKLREAAKSITKQIGGKTHQVAAKV 297

Query: 310 DEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN 369
           DEYARGMI   GSTLFEELGLYYIGPVDGHNIEDL+++ Q+V ++ + GPVL+H+VTE+ 
Sbjct: 298 DEYARGMISASGSTLFEELGLYYIGPVDGHNIEDLVTIFQKVKAMPAPGPVLIHIVTEKG 357

Query: 370 R------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVV 423
           +       A D          Q G       P    + +Y   F EAL+ EAE D  IV 
Sbjct: 358 KGYPPAEAAADKMHGVVKFDVQTGKQFKPKSP----TLSYTQYFAEALIKEAETDNKIVA 413

Query: 424 VHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYD 483
           +HA M     L  FQ++FP+R FDVG+AEQHAVTF+AGLA  GLKPFC I S+FLQR YD
Sbjct: 414 IHAAMGGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGYD 473

Query: 484 QVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMV 543
           QVV+DVD Q+LPVRF +  AGLVG+DGPT CGAFDI +M+CLPNM+VMAPSDE EL+ MV
Sbjct: 474 QVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDIAYMACLPNMVVMAPSDEAELMHMV 533

Query: 544 ATVASIDDRPVCFRYPRGAIVRTDL-PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNC 602
           AT A+IDDRP CFR+PRG  +   L P  +G P+EIGKG++L+EG  VA+LGYG++VQ C
Sbjct: 534 ATAAAIDDRPSCFRFPRGNGIGAALPPNNKGTPLEIGKGRILMEGNRVAILGYGSIVQQC 593

Query: 603 LKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIA 662
           ++A ++L   GI VTVADARFCKPLD  L+R+L + H FLITVEEGSIGGF SHVSHF++
Sbjct: 594 VEAASMLRTQGISVTVADARFCKPLDTDLIRQLAKEHEFLITVEEGSIGGFSSHVSHFLS 653

Query: 663 LDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREAL 717
           L G+L   +K R +VLPD YI+H SP  Q+  AG++ +HI AT LSLLG+ +EAL
Sbjct: 654 LSGILAGPLKLRAMVLPDRYIDHGSPQDQIQEAGISSNHITATVLSLLGKPKEAL 708


>gi|255583239|ref|XP_002532384.1| 1-deoxyxylulose-5-phosphate synthase, putative [Ricinus communis]
 gi|223527908|gb|EEF29996.1| 1-deoxyxylulose-5-phosphate synthase, putative [Ricinus communis]
          Length = 714

 Score =  771 bits (1992), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/654 (58%), Positives = 482/654 (73%), Gaps = 10/654 (1%)

Query: 71  DFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVEL 130
           +F  +K  TP+LD +  P+ +K+L++++L+QLA E+R+++   VSKT   L SSL  VEL
Sbjct: 61  EFSKEKPATPLLDTINYPVHMKNLSVQDLEQLAAELRADIVHSVSKTGGHLSSSLGVVEL 120

Query: 131 TVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFN 190
           +VALHHVF+ P DKI+WDVG Q Y HKILTGRRS +HT+RK  G++G+  R ES +D F 
Sbjct: 121 SVALHHVFNTPDDKIIWDVGHQAYPHKILTGRRSKMHTMRKTSGLAGFPKRDESVHDAFG 180

Query: 191 AGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
           AGH   S+SAGLGMAVARD+ GK   +++VI +G   AGQAYEAM+NAGYLDSN+IVILN
Sbjct: 181 AGHSSTSISAGLGMAVARDLLGKNNHVISVIGDGAMTAGQAYEAMNNAGYLDSNLIVILN 240

Query: 251 DSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKV 309
           D++  SL     + P T + ALSS L++IQ+S  FR+LRE AK +TK+IG   H+ AAKV
Sbjct: 241 DNKQVSLPTATLDGPATPVGALSSALTKIQASTKFRKLREAAKSITKQIGGQTHQVAAKV 300

Query: 310 DEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN 369
           DEYARGMI   GSTLFEELGLYYIGPVDGH+IEDL+++ Q+V ++ + GPVL+H+VTE  
Sbjct: 301 DEYARGMISASGSTLFEELGLYYIGPVDGHSIEDLVTIFQKVKAMPAPGPVLIHIVTE-- 358

Query: 370 RRAEDTQKSEAIEKQQEGASD---SNSLPFGNYSRT--YDDCFIEALVMEAEKDKDIVVV 424
            + +    +EA   +  G           F   S T  Y   F EAL+ EAE D  IV +
Sbjct: 359 -KGKGYPPAEAAADKMHGVVKFDVETGKQFKQKSSTLSYTQYFAEALIKEAEVDNKIVAI 417

Query: 425 HAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQ 484
           HA M     L  FQ++FP+R FDVG+AEQHAVTF+AGLA  GLKPFC I S+FLQR YDQ
Sbjct: 418 HAAMGGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGYDQ 477

Query: 485 VVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVA 544
           VV+DVD Q+LPVRF +  AGLVG+DGPT CGAFDIT+M+CLPNM+VMAPSDE EL+ MVA
Sbjct: 478 VVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITYMACLPNMVVMAPSDEAELMHMVA 537

Query: 545 TVASIDDRPVCFRYPRGAIVRTDL-PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCL 603
           T A+IDDRP CFR+PRG  +   L P  +G  +EIGKG++L+EG  VA+LGYG++VQ C+
Sbjct: 538 TAAAIDDRPSCFRFPRGNGIGVALPPNNKGTTLEIGKGRILMEGNRVAILGYGSIVQQCV 597

Query: 604 KARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIAL 663
           +A  +L    I VTVADARFCKPLD  L+R L + H FLITVEEGSIGGF SHVSHF++L
Sbjct: 598 EAAGMLRTRDIYVTVADARFCKPLDTDLIRRLAKEHEFLITVEEGSIGGFCSHVSHFLSL 657

Query: 664 DGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREAL 717
           +G+LD  +K R +VLPD YI+H SP  Q+  AGL+ +HIAAT LSLLG+ +EAL
Sbjct: 658 NGILDGPLKLRSMVLPDRYIDHGSPLDQIQEAGLSSNHIAATVLSLLGKPKEAL 711


>gi|356523941|ref|XP_003530592.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic-like [Glycine max]
          Length = 714

 Score =  771 bits (1992), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/661 (57%), Positives = 479/661 (72%), Gaps = 20/661 (3%)

Query: 71  DFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVEL 130
           ++  +K  TP+LD V +P+ +K+L+ ++L+QLA E+R+++   VS T   L SSL  VEL
Sbjct: 61  NYSGEKPATPLLDTVNHPIHMKNLSTQDLEQLAAELRADIVHSVSDTGGHLSSSLGVVEL 120

Query: 131 TVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFN 190
           +VALHHVF+ P DKI+WDVG Q Y HKILTGRRS +HT+RK  G++G+  R ES +D F 
Sbjct: 121 SVALHHVFNTPEDKIIWDVGHQAYPHKILTGRRSRMHTIRKSSGLAGFPKRDESVHDAFG 180

Query: 191 AGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
            GH   S+SAGLGMAVARD+ GK   I++VI +G   AGQAYEAM+NAG+LDSNMIV+LN
Sbjct: 181 VGHSSTSISAGLGMAVARDLLGKNNSIISVIGDGALTAGQAYEAMNNAGFLDSNMIVVLN 240

Query: 251 DSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKV 309
           D++  SL     + P T + ALSS LS+IQ+S  FR+LRE AK +TK+IG   H+ AAKV
Sbjct: 241 DNKQVSLPTATLDGPATPVGALSSALSKIQASSEFRKLREAAKTITKQIGGQTHQVAAKV 300

Query: 310 DEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN 369
           DEYARGMI   GSTLFEELGLYYIGPVDGHNIEDL+++ ++V ++ + GPVL+HVVTE+ 
Sbjct: 301 DEYARGMISASGSTLFEELGLYYIGPVDGHNIEDLVTIFEKVKAMPAPGPVLIHVVTEKG 360

Query: 370 R----------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDK 419
           +          R     K +    QQ  A  S        + +Y   F E+L+ EAE DK
Sbjct: 361 KGYPPAEKAADRMHGVVKFDPKTGQQFKAKTS--------TLSYTQYFAESLIKEAENDK 412

Query: 420 DIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQ 479
            IV +HA M     L  F ++FP+R FDVG+AEQHAVTF+AGLA  GLKPFC I S+FLQ
Sbjct: 413 KIVAIHAAMGGGTGLNYFHKRFPKRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQ 472

Query: 480 RAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDEL 539
           R YDQVV+DVD Q+LPVRF +  AGLVG+DGPT CGAFDI +M+CLPNM+VMAPSDE EL
Sbjct: 473 RGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDIAYMACLPNMVVMAPSDEAEL 532

Query: 540 VDMVATVASIDDRPVCFRYPRGAIVRTDLP-GYRGIPIEIGKGKVLVEGKDVALLGYGAM 598
           + MVAT A+IDDRP CFR+PRG  +   LP   +G  +EIGKG++LVEG  VA+LGYG++
Sbjct: 533 MHMVATAAAIDDRPSCFRFPRGNGIGATLPLNNKGTSLEIGKGRILVEGSRVAILGYGSV 592

Query: 599 VQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVS 658
           VQ C +A  +L +LGIDVTVADARFCKPLD  L+R L + H  LITVEEGSIGGFGSHVS
Sbjct: 593 VQQCRQASEMLKELGIDVTVADARFCKPLDTGLIRLLAKEHEILITVEEGSIGGFGSHVS 652

Query: 659 HFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALL 718
            F++L G+LD  +KWR ++LPD YIEH SP  Q+  AGL+   IAAT LSL+ R  EALL
Sbjct: 653 QFLSLSGILDGPLKWRAMMLPDRYIEHGSPQVQIEEAGLSSKQIAATVLSLMERPNEALL 712

Query: 719 L 719
            
Sbjct: 713 F 713


>gi|255586041|ref|XP_002533688.1| 1-deoxyxylulose-5-phosphate synthase, putative [Ricinus communis]
 gi|223526414|gb|EEF28696.1| 1-deoxyxylulose-5-phosphate synthase, putative [Ricinus communis]
          Length = 728

 Score =  771 bits (1992), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/657 (56%), Positives = 480/657 (73%), Gaps = 10/657 (1%)

Query: 71  DFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVEL 130
           +F   K  TP+LD V  P+ + +L++++L+ LA E+R E+  +VSKT   L SSL   EL
Sbjct: 73  NFSGTKPATPVLDTVNYPIHMNNLSVQDLEVLADELREEIVYVVSKTGGHLSSSLGVAEL 132

Query: 131 TVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFN 190
           TVALHHVF+ P D+I+WDVG Q Y HKILTGRRS + ++R+  G++G+  R ESE+D F 
Sbjct: 133 TVALHHVFNTPDDRIIWDVGHQAYPHKILTGRRSKMSSIRQTFGLAGFPKRDESEHDAFG 192

Query: 191 AGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
           AGH   S+SAGLGMAV RD+ GK   ++ VI +G   AGQAYEAM+NAGYLDSN+I+ILN
Sbjct: 193 AGHSSTSISAGLGMAVGRDLVGKNNHVIAVIGDGAMTAGQAYEAMNNAGYLDSNLIIILN 252

Query: 251 DSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKV 309
           D++  SL     + P   + ALS  L+++QSS+  RQLRE AKG+TK+IG   HE AAKV
Sbjct: 253 DNKQVSLPTATVDGPAPPVGALSKALTKLQSSRKIRQLREAAKGITKQIGGQTHEIAAKV 312

Query: 310 DEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN 369
           D Y RGM    G++LFEELGLYYIGPVDGH++EDL+++L++V SL + GPVL+HV+TE  
Sbjct: 313 DTYVRGMAAGSGASLFEELGLYYIGPVDGHSVEDLVTILKKVKSLPAPGPVLIHVITE-- 370

Query: 370 RRAEDTQKSEAIEKQQEGA-----SDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVV 424
            + +    +E    +  G      +    L   + +++Y   F E+L+ EAE+D  IV +
Sbjct: 371 -KGKGYSPAEVAADKMHGVVKFDPTSGKQLKSKSNTKSYTQYFAESLIAEAEQDDKIVAI 429

Query: 425 HAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQ 484
           HA M     L LFQ++FPE+ FDVG+AEQHAVTF+AGLA  GLKPFC I S+FLQR YDQ
Sbjct: 430 HAAMGGGTGLNLFQKQFPEKCFDVGIAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGYDQ 489

Query: 485 VVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVA 544
           VV+DVD Q+LPVRF I  AGLVG+DGPT CGAFD+T+M+CLPNM+VMAPSDE EL+ MVA
Sbjct: 490 VVHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDVTYMACLPNMVVMAPSDETELMHMVA 549

Query: 545 TVASIDDRPVCFRYPRGAIVRTDL-PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCL 603
           T A+IDDRP CFRYPRG  + T L P  +G P+EIGKG++L EG  VALLGYG MVQ+CL
Sbjct: 550 TAAAIDDRPSCFRYPRGNGIGTILPPNNKGTPLEIGKGRILREGSRVALLGYGTMVQSCL 609

Query: 604 KARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIAL 663
            A  LL K  I  TVADARFCKPLD +LVR+L Q H  LITVEEGSIGGFGSHV++F+ L
Sbjct: 610 AAADLLKKFNITATVADARFCKPLDGQLVRQLAQEHEILITVEEGSIGGFGSHVANFLCL 669

Query: 664 DGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLLM 720
           +GLLD  +KWRP++LPD YI+H S T Q+  AGL+  HIAAT +SL+G  +++L L+
Sbjct: 670 NGLLDGNLKWRPMMLPDRYIDHGSQTDQIEEAGLSSKHIAATVVSLIGGQKDSLHLL 726


>gi|51234083|gb|AAT97962.1| putative 1-deoxy-D-xylulose 5-phosphate synthase 2 [Solanum
           habrochaites]
          Length = 714

 Score =  770 bits (1989), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/657 (57%), Positives = 480/657 (73%), Gaps = 12/657 (1%)

Query: 71  DFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVEL 130
           DF  +K PTP LD +  P  +K+L+  +L+QLA E+R+E+   V+ T   L SSL  V+L
Sbjct: 61  DFSGEKPPTPFLDTINYPKHMKNLSKMDLEQLAAELRAEIVYSVANTGGHLSSSLGVVDL 120

Query: 131 TVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFN 190
           TVALHHVF  P DKI+WDVG Q YAHKILTGRRS +HT+RK  G++ +  R ES +D F 
Sbjct: 121 TVALHHVFDTPEDKIIWDVGHQAYAHKILTGRRSKMHTMRKTSGLAPFPKRDESAHDAFG 180

Query: 191 AGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
           AGH   S+SAGLGMAVARD+ G    +++VI +G   AGQAYEAM+NAG+LDSN+IVILN
Sbjct: 181 AGHSSTSISAGLGMAVARDLLGNNNHVISVIGDGAMTAGQAYEAMNNAGFLDSNLIVILN 240

Query: 251 DSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKV 309
           D++  SL     + P T + ALSS LS++Q+S  FRQLRE AK +TK+IG   HE AAKV
Sbjct: 241 DNKQVSLPTATLDGPATPVGALSSALSKLQASLKFRQLREAAKTITKQIGPQAHEVAAKV 300

Query: 310 DEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN 369
           DEYARGM+   GSTLFEELGLYYIGPVDGHNIEDLI++L++V  + + GPVL+H+VTE+ 
Sbjct: 301 DEYARGMLSASGSTLFEELGLYYIGPVDGHNIEDLITILEKVKEMPAPGPVLIHIVTEKG 360

Query: 370 R------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVV 423
           +       A+D     A    + G       P  +Y+R     F E+L+ EAE D  IV 
Sbjct: 361 KGYLPAEAADDKMHGVAQFDPKTGKQFKAKSPTLSYTR----YFAESLIKEAENDNKIVA 416

Query: 424 VHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYD 483
           +HA M     L  FQ++FPER FDVG+AEQHAVTF+AGLA  GLKPFC I S+FLQR YD
Sbjct: 417 IHAAMGGGTGLNYFQKQFPERCFDVGIAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGYD 476

Query: 484 QVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMV 543
           QVV+DVD Q+LPVRF +  AGLVG+DGPT CGAFD+T+M+CLPNM+VMAPSDE EL+ MV
Sbjct: 477 QVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTYMACLPNMVVMAPSDEAELMHMV 536

Query: 544 ATVASIDDRPVCFRYPRGAIVRTDLP-GYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNC 602
           AT A+IDDRP CFR+PRG  +   LP   +GIPIE+GKG++L EG+ VA+LGYG+++Q C
Sbjct: 537 ATAAAIDDRPSCFRFPRGNGIGAILPLNNKGIPIEVGKGRILREGERVAILGYGSIIQQC 596

Query: 603 LKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIA 662
           L A  +L+   + VTVADARFCKPLD  L+R L + H  LITVEEGSIGGFGSHVSHF++
Sbjct: 597 LGAADILNSHNVRVTVADARFCKPLDADLIRSLAKEHEILITVEEGSIGGFGSHVSHFLS 656

Query: 663 LDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLL 719
           L+ +LD  +K R ++LPD YI+H SP  Q+  AGL+  HI++T L+LLGR +EA+++
Sbjct: 657 LNSILDGPLKLRSMLLPDRYIDHGSPVDQIEAAGLSSRHISSTVLTLLGRPKEAMVV 713


>gi|224102539|ref|XP_002312717.1| predicted protein [Populus trichocarpa]
 gi|222852537|gb|EEE90084.1| predicted protein [Populus trichocarpa]
          Length = 713

 Score =  769 bits (1986), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 401/692 (57%), Positives = 495/692 (71%), Gaps = 42/692 (6%)

Query: 63  ICA-LPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSL 121
           +CA L +  +F   + PTP+LD V  P+ +K+L+IKELKQLA E+RS++   VSKT   L
Sbjct: 28  VCASLSESGEFPSQRPPTPLLDTVNYPIHMKNLSIKELKQLAEELRSDVIFNVSKTGGHL 87

Query: 122 KSSLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSR 181
            SSL  VELTVALH+VF++P DKILWDVG Q Y HKILTGRR  +HT+R+ +G++G+T R
Sbjct: 88  GSSLGVVELTVALHYVFNSPQDKILWDVGHQAYPHKILTGRRDKMHTIRQTNGLAGFTKR 147

Query: 182 SESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL 241
           SESEYD F  GH   ++SAGLGMAV RD+KG+   +V VI +G   AGQAYEAM+NAGYL
Sbjct: 148 SESEYDCFGTGHSSTTISAGLGMAVGRDLKGRANNVVAVIGDGAMTAGQAYEAMNNAGYL 207

Query: 242 DSNMIVILNDSRHSLHPKIE-ESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGR 300
           DS+MIVILND++    P    + P   + ALSS LSR+QS++  R+LREVAKG+TK+IG 
Sbjct: 208 DSDMIVILNDNKQVSLPTANLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGG 267

Query: 301 GMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPV 360
            MHE AAKVDEYARGMI   GSTLFEELGLYYIGPVDGHNI+DLI++L+EV S  + GPV
Sbjct: 268 PMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDLIAILKEVKSTKTTGPV 327

Query: 361 LVHVVTEENR------RAED----TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEA 410
           L+HVVTE+ R      RA D      K +    +Q  AS S        +++Y   F EA
Sbjct: 328 LIHVVTEKGRGYPYAERAADKYHGVNKFDPATGKQSKASAS--------TQSYTTYFAEA 379

Query: 411 LVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPF 470
           L+ EAE DKD+V +HA M     L LF  +FP R FDVG+AEQHAVTF+AGLAC GLKPF
Sbjct: 380 LIAEAEADKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPF 439

Query: 471 CIIPSAFLQ-RAYDQ---------VVNDVD-----------QQRLPVRFVITSAGLVGSD 509
           C I S FL    YD          ++ D D           + +LPVRF +  AGLVG+D
Sbjct: 440 CAIYSFFLLILLYDNTQQYLVGIILLPDTDSSPHVDTIINVKMKLPVRFAMDRAGLVGAD 499

Query: 510 GPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYPRGAIVRTDLP 569
           GPT CGAFD+T+M+CLPNM+VMAPSDE EL  MVAT A+IDDRP CFRYPRG  V   LP
Sbjct: 500 GPTHCGAFDVTYMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGVGVQLP 559

Query: 570 G-YRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLD 628
              +GIP+E+GKG++L+EG+ VALLGYG  VQ+CL A +L+ + GI +TVADARFCKPLD
Sbjct: 560 PENKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAAASLVERHGIHLTVADARFCKPLD 619

Query: 629 IKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASP 688
             L+R L ++H  LITVEEGSIGGFGSHV+HF+ALDGLLD  +KWRP+VLPD YI+H SP
Sbjct: 620 NALIRSLAKSHEVLITVEEGSIGGFGSHVAHFLALDGLLDGKLKWRPVVLPDRYIDHGSP 679

Query: 689 TQQLALAGLTGHHIAATALSLLGRTREALLLM 720
             QL  AGLT  HIAAT  ++LG+ R +L +M
Sbjct: 680 ADQLVEAGLTPSHIAATVFNILGQRRNSLEIM 711


>gi|153799538|gb|ABS50520.1| 1-deoxy-D-xylulose 5-phosphate synthase type II [Picea abies]
          Length = 746

 Score =  768 bits (1983), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/647 (57%), Positives = 474/647 (73%), Gaps = 4/647 (0%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           +K PTP+LD +  P+ +K+  IKEL+QLA E+R E+   V++T   L +SL  V+LTVAL
Sbjct: 89  EKPPTPLLDTINYPIHMKNFNIKELRQLAKELREEIIFSVAETGGHLSASLGVVDLTVAL 148

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H+VF+ P DK++WDVG Q+Y HKILTGRRS + T+R+  G++G+  R ESE+D F  GH 
Sbjct: 149 HYVFNTPHDKVVWDVGHQSYPHKILTGRRSKMGTMRQTSGLAGFPRRVESEHDAFGVGHS 208

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA +GMAV RD+ GK   ++ VI +G   AGQAYEA++NAG+LDSNMI+ILND++ 
Sbjct: 209 STSISAAIGMAVGRDLLGKHNHVIAVIGDGAMTAGQAYEALNNAGFLDSNMIIILNDNKQ 268

Query: 255 -SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYA 313
            SL     + P   + ALSS L R+Q+SK FRQLREVAK +T +IG   H+ AAKVD+YA
Sbjct: 269 VSLPTATIDGPAPPVGALSSALCRLQASKKFRQLREVAKDITHQIGGATHQLAAKVDDYA 328

Query: 314 RGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAE 373
           RGM    GS LFEELGLYYIGPVDGHNI+DL+++L+ V S+ + GPVL+HVVTE+ +   
Sbjct: 329 RGMFSAPGSALFEELGLYYIGPVDGHNIQDLVAILENVKSMPTPGPVLIHVVTEKGKGYP 388

Query: 374 DTQKSEAIEKQQEGASDSNSLPFGNYSRT--YDDCFIEALVMEAEKDKDIVVVHAGMEMD 431
             +K+            +    F   S T  Y   F E L+ EAE+D+ IV +HA M   
Sbjct: 389 PAEKAADKLHGVVKFDPATGKQFKPKSSTLSYTQYFAEGLMAEAERDEKIVAIHAAMGGG 448

Query: 432 LSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQ 491
             L  FQ++FPER FDVG+AEQHAVTF+AGLA  GLKPFC I S+FLQR YDQVV+DVD 
Sbjct: 449 TGLNYFQKRFPERCFDVGIAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGYDQVVHDVDL 508

Query: 492 QRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDD 551
           Q+LPVRF +  AGLVG+DGPT CGAFD+T+M+CLPNM+VMAPSDE EL+ MVAT A+IDD
Sbjct: 509 QKLPVRFALDRAGLVGADGPTHCGAFDVTYMACLPNMVVMAPSDEAELMHMVATSAAIDD 568

Query: 552 RPVCFRYPRGAIVRTDL-PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLS 610
           RP CFR+PRG  V   L P  +G P++IGKG++L EG  +A+LGYG++VQNCL AR +L+
Sbjct: 569 RPSCFRFPRGNGVGVPLPPNNKGTPLKIGKGRILAEGTRIAILGYGSIVQNCLAAREMLA 628

Query: 611 KLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSG 670
           + GI VTVADARFCKPLD  L+R L + H  L+TVEEGSIGGFGSHVSHF+AL GL D  
Sbjct: 629 QQGISVTVADARFCKPLDGDLIRRLVKEHEILVTVEEGSIGGFGSHVSHFLALHGLFDGK 688

Query: 671 VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREAL 717
           +KWRP+VLPD YI+H SP  Q+  AGL+  HIAAT +SL+G+ + AL
Sbjct: 689 LKWRPMVLPDRYIDHGSPKDQIEEAGLSSRHIAATVMSLIGKPQNAL 735


>gi|256619606|emb|CAZ66649.1| 1-deoxy-D-xylulose 5-phosphate synthase 2 precursor [Solanum
           lycopersicum]
          Length = 714

 Score =  768 bits (1982), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/657 (57%), Positives = 479/657 (72%), Gaps = 12/657 (1%)

Query: 71  DFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVEL 130
           DF  +K PTP LD +  P  +K+L+  +L+QLA E+R+E+   V+KT   L SSL  V+L
Sbjct: 61  DFSGEKPPTPFLDTINYPKHMKNLSKMDLEQLAAELRAEIVYSVAKTGGHLSSSLGVVDL 120

Query: 131 TVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFN 190
           TVALHHVF  P DKI+WDVG Q YAHKILTGRRS +HT+RK  G++ +  R ES +D F 
Sbjct: 121 TVALHHVFDTPEDKIIWDVGHQAYAHKILTGRRSKMHTMRKTSGLAPFPKRDESVHDAFG 180

Query: 191 AGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
           AGH   S+SAGLGMAVARD+ G    +++VI +G   AGQAYEAM+NAG+LDSN+IVILN
Sbjct: 181 AGHSSTSISAGLGMAVARDLLGNNNHVISVIGDGAMTAGQAYEAMNNAGFLDSNLIVILN 240

Query: 251 DSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKV 309
           D++  SL     + P T + ALSS LS++Q+S  FRQLRE AK +TK+IG   HE AAKV
Sbjct: 241 DNKQVSLPTATLDGPATPVGALSSALSKLQASLKFRQLREAAKTITKQIGPQAHEVAAKV 300

Query: 310 DEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN 369
           DEYARGM+   GSTLFEELGLYYIGPVDGHNIEDLI++L++V +L + GPVL+H+VTE+ 
Sbjct: 301 DEYARGMLSASGSTLFEELGLYYIGPVDGHNIEDLITILEKVKALPAPGPVLIHIVTEKG 360

Query: 370 R------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVV 423
           +       A+D     A    + G       P    + TY   F E+L+ EAE D  IV 
Sbjct: 361 KGYLPAEAADDKMHGVAQFDPKTGKQFKAKSP----TLTYTQYFAESLIKEAENDNKIVA 416

Query: 424 VHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYD 483
           +HA M     L  FQ++FPER FDVG+AEQHAVTF+AGLA  GLKPFC I S+FLQR YD
Sbjct: 417 IHAAMGGGTGLNYFQKQFPERCFDVGIAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGYD 476

Query: 484 QVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMV 543
           QVV+DVD Q+LPVRF +  AGLVG+DGPT CGAFD+T+M+CLPNM+VMAPSDE EL+ MV
Sbjct: 477 QVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTYMACLPNMVVMAPSDEAELMHMV 536

Query: 544 ATVASIDDRPVCFRYPRGAIVRTDLP-GYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNC 602
           AT A+IDDRP CFR+PRG  +   L    +GIPIE+GKG++L EG+ VA+LGYG+++Q C
Sbjct: 537 ATAAAIDDRPSCFRFPRGNGIGAILSLNNKGIPIEVGKGRILREGERVAILGYGSIIQQC 596

Query: 603 LKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIA 662
           L A  +L+   I V VADARFCKPLD  L+R L + H  LITVEEGSIGGFGSHVSHF++
Sbjct: 597 LGAADILNSHDIRVAVADARFCKPLDADLIRSLAKEHEILITVEEGSIGGFGSHVSHFLS 656

Query: 663 LDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLL 719
           L+ +LD  +K R ++LPD YI+H SP  Q+  AGL+  HI++T L+LLGR +EA+++
Sbjct: 657 LNSILDGPLKLRSMLLPDRYIDHGSPVDQIEAAGLSSRHISSTVLTLLGRPKEAMVV 713


>gi|408833346|gb|AFU93069.1| chloroplast 1-deoxy-D-xylulose-5-phosphate synthase [Eucommia
           ulmoides]
          Length = 713

 Score =  766 bits (1978), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/656 (56%), Positives = 475/656 (72%), Gaps = 10/656 (1%)

Query: 71  DFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVEL 130
           DF  +K PTP+LD +  P+ +K+L++++L+QLA E+R+++   V+K    L +SL  V+L
Sbjct: 60  DFSGEKPPTPLLDTINFPVHMKNLSVQDLEQLAAELRADIVYTVAKIGGHLSASLGVVDL 119

Query: 131 TVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFN 190
            VALHHVF+ P DKI+WDVG Q Y HKILTGRRS +HT+RK  G++G+  R ES YD F 
Sbjct: 120 AVALHHVFNTPDDKIIWDVGHQAYPHKILTGRRSRMHTIRKTSGLAGFPKRDESTYDAFG 179

Query: 191 AGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
           AGH   S+SAGLGMA+ARD+ GK   +++VI +G   AGQAYEA++NAG+LDSN+IV+LN
Sbjct: 180 AGHSSTSISAGLGMAIARDLLGKNNNVISVIGDGAMTAGQAYEALNNAGFLDSNLIVVLN 239

Query: 251 DSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKV 309
           D++  SL     + P T + ALSS LS++Q+S  FRQLRE AK +TK+IG   HE AAKV
Sbjct: 240 DNKQVSLPTATIDGPATPVGALSSALSKLQASPKFRQLREAAKTITKQIGPQAHEVAAKV 299

Query: 310 DEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN 369
           DEYARGM    GSTLFEELGLYYIGPVDGHNIEDL+++ Q+V  + + GPVL+H+VTE  
Sbjct: 300 DEYARGMFSATGSTLFEELGLYYIGPVDGHNIEDLVTIFQKVKEMPAPGPVLIHIVTE-- 357

Query: 370 RRAEDTQKSEAIEKQQEGA-----SDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVV 424
            + +    +E+   +  G      +          + +Y   F E+L+ EAE D  IV +
Sbjct: 358 -KGKGYPPAESAPDKMHGVVKFDPATGKQFKVKAPTLSYTQYFAESLIKEAEADSKIVAI 416

Query: 425 HAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQ 484
           HA M     L  FQ++FP+R FDVG+AEQHAVTF+AGLA  GLKPFC I S+FLQR YDQ
Sbjct: 417 HAAMGGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGYDQ 476

Query: 485 VVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVA 544
           VV+DVD Q+LPVRF +  AGLVG+DGPT CGAFDI +M+CLPNM+VMAP+DE EL+ MVA
Sbjct: 477 VVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDIAYMACLPNMVVMAPADEAELMHMVA 536

Query: 545 TVASIDDRPVCFRYPRGAIVRTDLP-GYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCL 603
           T A IDDRP CFR+PRG  V   LP   +G P+EIGKG++L+EG  VA+LGYG++VQ CL
Sbjct: 537 TAAVIDDRPSCFRFPRGNGVGAVLPLNNKGTPMEIGKGRILIEGSRVAILGYGSIVQQCL 596

Query: 604 KARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIAL 663
            A ALL    + VTVADARFCKPLD  L++ L   H  L+TVEEGS+GGFGSHVSHF++L
Sbjct: 597 GAAALLKDRNVSVTVADARFCKPLDADLIKRLTHEHEILLTVEEGSVGGFGSHVSHFLSL 656

Query: 664 DGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLL 719
           +G+LD  +K R +VLPD YI+H SP  Q+  AGL+  HI  T LSLLGR +EAL L
Sbjct: 657 NGILDGPLKLRAMVLPDRYIDHGSPQDQIEEAGLSSRHICGTILSLLGRPKEALQL 712


>gi|218199226|gb|EEC81653.1| hypothetical protein OsI_25196 [Oryza sativa Indica Group]
          Length = 713

 Score =  765 bits (1975), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/656 (57%), Positives = 472/656 (71%), Gaps = 10/656 (1%)

Query: 71  DFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVEL 130
           D+  +K  TP+LD V  P+ +K+L+  EL+QLA E+R+E+   VSKT   L SSL  VEL
Sbjct: 60  DYSGEKPATPLLDTVNYPVHMKNLSTPELEQLAAELRAEIVHTVSKTGGHLSSSLGVVEL 119

Query: 131 TVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFN 190
            VALHHVF  P DKI+WDVG Q Y HKILTGRRS +HT+R+  G++G+  R ES +D F 
Sbjct: 120 AVALHHVFDTPEDKIIWDVGHQAYPHKILTGRRSRMHTIRQTSGLAGFPKRDESAHDAFG 179

Query: 191 AGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
           AGH   S+SA LGMAVARD+ GK+  +++VI +G   AGQAYEAM+N+GYLDSNMIV+LN
Sbjct: 180 AGHSSTSISAALGMAVARDLLGKKNHVISVIGDGAMTAGQAYEAMNNSGYLDSNMIVVLN 239

Query: 251 DSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKV 309
           D++  SL     + P T + ALS  L+++QSS   R+LRE AK +TK+IG   HE AAKV
Sbjct: 240 DNKQVSLPTATLDGPATPVGALSKALTKLQSSTKLRRLREAAKTVTKQIGGQAHEVAAKV 299

Query: 310 DEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN 369
           DEYARGM+   GSTLFEELGLYYIGPVDGH+++DL+++  +V S+ + GPVLVH+VTE+ 
Sbjct: 300 DEYARGMVSASGSTLFEELGLYYIGPVDGHSVDDLVAIFNKVKSMPAPGPVLVHIVTEKG 359

Query: 370 RRAEDTQKSEAIEKQQEGA---SDSNSLPFGNYSRT--YDDCFIEALVMEAEKDKDIVVV 424
           +       +EA   +  G      +    F +   T  Y   F EAL+ EAE D  +V +
Sbjct: 360 K---GYPPAEAAADRMHGVVKFDPTTGRQFKSKCSTLSYTQYFAEALIREAEADDKVVGI 416

Query: 425 HAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQ 484
           HA M     L  F ++FPER FDVG+AEQHAVTF+AGLA  GLKPFC I S+FLQR YDQ
Sbjct: 417 HAAMGGGTGLNYFHKRFPERCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRGYDQ 476

Query: 485 VVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVA 544
           VV+DVD QRLPVRF +  AGLVG+DGPT CGAFD+ +M+CLPNM+VMAP+DE EL+ MVA
Sbjct: 477 VVHDVDLQRLPVRFAMDRAGLVGADGPTHCGAFDVAYMACLPNMVVMAPADEAELMHMVA 536

Query: 545 TVASIDDRPVCFRYPRGAIVRTDL-PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCL 603
           T A+IDDRP CFR+PRG  +   L P ++G P+E+GKG+VLV G  VALLGYG MVQ C+
Sbjct: 537 TAAAIDDRPSCFRFPRGNGIGAVLPPNHKGTPLEVGKGRVLVGGNRVALLGYGTMVQACM 596

Query: 604 KARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIAL 663
           KA   L + GI VTVADARFCKPLD  L+REL   H  L+TVEEGSIGGFGSHV+H+++L
Sbjct: 597 KAAEALKEHGIYVTVADARFCKPLDTGLIRELAAEHEVLVTVEEGSIGGFGSHVAHYLSL 656

Query: 664 DGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLL 719
            GLLD  +K R + LPD YI+H +P  QL  AGLT  HIAAT LSLLGR  EAL L
Sbjct: 657 SGLLDGPLKLRSMFLPDRYIDHGAPVDQLEEAGLTPRHIAATVLSLLGRPMEALQL 712


>gi|10178920|emb|CAC08458.1| 1-D-desoxyxylulose 5-phosphate synthase (DXS) [Narcissus
           pseudonarcissus]
          Length = 709

 Score =  765 bits (1975), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/656 (57%), Positives = 472/656 (71%), Gaps = 12/656 (1%)

Query: 72  FFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELT 131
           +  +K   P+LD + +P  +K+L+ ++L+QLA E+R ++   VSKT   L +SL  V+LT
Sbjct: 57  YSGEKPAVPLLDTINDPAHMKNLSTQDLEQLASELRLDIVHSVSKTGGHLSASLGVVDLT 116

Query: 132 VALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNA 191
           V LHHVF  P DKI+WDVG Q YAHKILTGRRS +HTLR+  G++G+  R ES +D F A
Sbjct: 117 VVLHHVFDTPDDKIIWDVGHQAYAHKILTGRRSRMHTLRQTSGLAGFPKRDESVHDAFGA 176

Query: 192 GHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILND 251
           GH   S+SAGLGMAVARD+ GK   +++VI +G   AGQAYEAM+N GYLDSN+IV+LND
Sbjct: 177 GHSSTSISAGLGMAVARDLLGKSNHVISVIGDGVMTAGQAYEAMNNVGYLDSNLIVVLND 236

Query: 252 SRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVD 310
           ++  SL       P T + ALS  L+++Q+S  FRQLRE AK +TK+IG   HE AAKVD
Sbjct: 237 NKQVSLPTATLNGPATPVGALSGALAKLQASAKFRQLREAAKCITKQIGGQAHEVAAKVD 296

Query: 311 EYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR 370
           EYARGMI   G++LFEELGLYYIGPVDGHN+EDL+++ ++V ++ S GPVLVH+VTE+ +
Sbjct: 297 EYARGMISASGASLFEELGLYYIGPVDGHNVEDLVAIFKKVKAMPSPGPVLVHIVTEKGK 356

Query: 371 ------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVV 424
                  A D          + G       P    + +Y   F E+LV EAE D+ IV +
Sbjct: 357 GYPPAEAAADKMHGVVKFDPKTGKQFKTKFP----TLSYTQYFAESLVKEAEVDEKIVAI 412

Query: 425 HAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQ 484
           HA M     L  FQ+KFP+R FDVG+AEQHAVTF+AGLA  GLKPFC I S+FLQR YDQ
Sbjct: 413 HAAMGGGTGLNFFQKKFPDRCFDVGIAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGYDQ 472

Query: 485 VVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVA 544
           VV+DVD Q+LPVRF +  AGLVG+DGPT CGAFD+T+M+CLPNMIVMAPSDE EL+ MVA
Sbjct: 473 VVHDVDLQKLPVRFALDRAGLVGADGPTHCGAFDVTYMACLPNMIVMAPSDEAELMHMVA 532

Query: 545 TVASIDDRPVCFRYPRGAIVRTDLPG-YRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCL 603
           T A+IDDRP CFR+PRG  V   LP  Y+G P+EIGKG++L+EG  VA+LGYG++VQ+CL
Sbjct: 533 TAAAIDDRPSCFRFPRGNGVGVALPSDYKGTPLEIGKGRILMEGDKVAILGYGSIVQSCL 592

Query: 604 KARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIAL 663
           KA   L + GI  TVAD RFCKPLD +L+R L   H  LITVEEGSIGGF SHVSHF++L
Sbjct: 593 KAAGSLRERGISATVADGRFCKPLDSELIRRLVNEHEILITVEEGSIGGFASHVSHFLSL 652

Query: 664 DGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLL 719
           +GLLD  +K R +VLPD YI+H +P  Q+  AGL+  HIA T LSLLGR  EA  L
Sbjct: 653 NGLLDGHLKLRSMVLPDRYIDHGAPKDQIEEAGLSSKHIAGTVLSLLGRPMEAFQL 708


>gi|115470975|ref|NP_001059086.1| Os07g0190000 [Oryza sativa Japonica Group]
 gi|75225072|sp|Q6YU51.1|DXS2_ORYSJ RecName: Full=Probable 1-deoxy-D-xylulose-5-phosphate synthase 2,
           chloroplastic; Short=1-deoxyxylulose-5-phosphate
           synthase; Short=DXP synthase; Short=DXPS; Flags:
           Precursor
 gi|34394179|dbj|BAC84616.1| putative 1-deoxyxylulose 5-phosphate synthase [Oryza sativa
           Japonica Group]
 gi|50509413|dbj|BAD31023.1| putative 1-deoxyxylulose 5-phosphate synthase [Oryza sativa
           Japonica Group]
 gi|113610622|dbj|BAF21000.1| Os07g0190000 [Oryza sativa Japonica Group]
 gi|215704796|dbj|BAG94824.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222636586|gb|EEE66718.1| hypothetical protein OsJ_23394 [Oryza sativa Japonica Group]
          Length = 713

 Score =  764 bits (1974), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/656 (57%), Positives = 472/656 (71%), Gaps = 10/656 (1%)

Query: 71  DFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVEL 130
           D+  +K  TP+LD V  P+ +K+L+  EL+QLA E+R+E+   VSKT   L SSL  VEL
Sbjct: 60  DYSGEKPATPLLDTVNYPVHMKNLSTPELEQLAAELRAEIVHTVSKTGGHLSSSLGVVEL 119

Query: 131 TVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFN 190
            VALHHVF  P DKI+WDVG Q Y HKILTGRRS +HT+R+  G++G+  R ES +D F 
Sbjct: 120 AVALHHVFDTPEDKIIWDVGHQAYPHKILTGRRSRMHTIRQTSGLAGFPKRDESAHDAFG 179

Query: 191 AGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
           AGH   S+SA LGMAVARD+ GK+  +++VI +G   AGQAYEAM+N+GYLDSNMIV+LN
Sbjct: 180 AGHSSTSISAALGMAVARDLLGKKNHVISVIGDGAMTAGQAYEAMNNSGYLDSNMIVVLN 239

Query: 251 DSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKV 309
           D++  SL     + P T + ALS  L+++QSS   R+LRE AK +TK+IG   HE AAKV
Sbjct: 240 DNKQVSLPTATLDGPATPVGALSKALTKLQSSTKLRRLREAAKTVTKQIGGQAHEVAAKV 299

Query: 310 DEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN 369
           DEYARGM+   GSTLFEELGLYYIGPVDGH+++DL+++  +V S+ + GPVLVH+VTE+ 
Sbjct: 300 DEYARGMVSASGSTLFEELGLYYIGPVDGHSVDDLVAIFNKVKSMPAPGPVLVHIVTEKG 359

Query: 370 RRAEDTQKSEAIEKQQEGA---SDSNSLPFGNYSRT--YDDCFIEALVMEAEKDKDIVVV 424
           +       +EA   +  G      +    F +   T  Y   F EAL+ EAE D  +V +
Sbjct: 360 K---GYPPAEAAADRMHGVVKFDPTTGRQFKSKCSTLSYTQYFAEALIREAEADDKVVGI 416

Query: 425 HAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQ 484
           HA M     L  F ++FPER FDVG+AEQHAVTF+AGLA  GLKPFC I S+FLQR YDQ
Sbjct: 417 HAAMGGGTGLNYFHKRFPERCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRGYDQ 476

Query: 485 VVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVA 544
           VV+DVD QRLPVRF +  AGLVG+DGPT CGAFD+ +M+CLPNM+VMAP+DE EL+ MVA
Sbjct: 477 VVHDVDLQRLPVRFAMDRAGLVGADGPTHCGAFDVAYMACLPNMVVMAPADEAELMHMVA 536

Query: 545 TVASIDDRPVCFRYPRGAIVRTDL-PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCL 603
           T A+IDDRP CFR+PRG  +   L P ++G P+E+GKG+VLV G  VALLGYG MVQ C+
Sbjct: 537 TAAAIDDRPSCFRFPRGNGIGAVLPPNHKGTPLEVGKGRVLVGGNRVALLGYGTMVQACM 596

Query: 604 KARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIAL 663
           KA   L + GI VTVADARFCKPLD  L+REL   H  L+TVEEGSIGGFGSHV+H+++L
Sbjct: 597 KAAEALKEHGIYVTVADARFCKPLDTGLIRELAAEHEVLVTVEEGSIGGFGSHVAHYLSL 656

Query: 664 DGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLL 719
            GLLD  +K R + LPD YI+H +P  QL  AGLT  HIAAT LSLLGR  EAL L
Sbjct: 657 SGLLDGPLKLRSMFLPDRYIDHGAPVDQLEEAGLTPRHIAATVLSLLGRPLEALQL 712


>gi|374639395|gb|AEZ55686.1| putative 1-deoxy-D-xylulose 5-phosphate synthase of [Salvia
           miltiorrhiza]
          Length = 713

 Score =  763 bits (1971), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/661 (56%), Positives = 473/661 (71%), Gaps = 20/661 (3%)

Query: 71  DFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVEL 130
           DF  +K  TP+LD + +P+ +K+L+ KEL+QLA E+R E+   V+KT   L SSL  VEL
Sbjct: 60  DFSGEKPATPMLDTINHPIHMKNLSKKELEQLAAELRVEIVHTVAKTGGHLSSSLGVVEL 119

Query: 131 TVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFN 190
           TVALHHVF+ P DK++WDVG Q Y HKILTGRRS +HT+R+  G++G+  R ES +D F 
Sbjct: 120 TVALHHVFNTPHDKLIWDVGHQAYGHKILTGRRSKMHTIRQTSGLAGFPKRDESVHDAFG 179

Query: 191 AGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
            GH   S+SAGLGMAVARD+ GK   +V+VI +G   AGQAYEAM+NAG+LDSN+I++LN
Sbjct: 180 VGHSSTSISAGLGMAVARDLLGKDNSVVSVIGDGAMTAGQAYEAMNNAGFLDSNLIIVLN 239

Query: 251 DSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKV 309
           D++  SL     + P T + ALSS L+++Q+S  FRQLRE AK +TK+IG   HE AAKV
Sbjct: 240 DNKQVSLPTATLDGPATPVGALSSALTKLQASPKFRQLREAAKSITKQIGPQAHEVAAKV 299

Query: 310 DEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN 369
           DEYARGM+   GST FEELGLYYIGPVDGHNI+DL+++ Q+V S+ + GPVL+H+VTE+ 
Sbjct: 300 DEYARGMLSASGSTFFEELGLYYIGPVDGHNIDDLVTIFQKVKSMPAPGPVLIHIVTEKG 359

Query: 370 R----------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDK 419
           +          R     K +    +Q  A  S        + +Y   F E+L+ EAE D 
Sbjct: 360 KGYPPAEAAADRMHGVVKFDPCTGKQNKAKSS--------TLSYTQYFAESLIREAEADS 411

Query: 420 DIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQ 479
            IV +HA M     L  FQ++FP+R FDVG+AEQHAVTF+AGLA  GLKPFC I S+FLQ
Sbjct: 412 KIVAIHAAMGGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGLATEGLKPFCTIYSSFLQ 471

Query: 480 RAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDEL 539
           R YDQVV+DVD Q+LPVRF +  AGLVG+DGPT CG+FD+T+M+CLPNM+VMAPSDE EL
Sbjct: 472 RGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTYMACLPNMVVMAPSDEAEL 531

Query: 540 VDMVATVASIDDRPVCFRYPRGAIVRTDLP-GYRGIPIEIGKGKVLVEGKDVALLGYGAM 598
           + MVAT A+IDDRP CFR+PRG  V   LP   +G PIEIGKG++++EG  VA+LGYGA 
Sbjct: 532 IHMVATAAAIDDRPSCFRFPRGNGVGAPLPYNNKGTPIEIGKGRIVMEGSRVAILGYGAA 591

Query: 599 VQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVS 658
           VQ C+ A  +L    I  T+ DARFCKPLD  L+  L + H  LITVEEGSIGGFGSHVS
Sbjct: 592 VQQCIGAAEMLKSYDIAPTLVDARFCKPLDTHLITRLAKEHEILITVEEGSIGGFGSHVS 651

Query: 659 HFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALL 718
           HF++L+GLLD  +K R ++LPD YIEH +P  Q+  AGLT  HI  T LSL+GR  EAL 
Sbjct: 652 HFLSLNGLLDGHLKLRSMMLPDRYIEHGAPQDQIEEAGLTSRHICGTVLSLVGRPMEALK 711

Query: 719 L 719
           L
Sbjct: 712 L 712


>gi|224117606|ref|XP_002331678.1| predicted protein [Populus trichocarpa]
 gi|222874097|gb|EEF11228.1| predicted protein [Populus trichocarpa]
          Length = 646

 Score =  763 bits (1971), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/652 (57%), Positives = 474/652 (72%), Gaps = 18/652 (2%)

Query: 71  DFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVEL 130
           +F  +K  TP+LD + +P+ +K+L+++EL  L  E+R E+   VSKT   L SSL   EL
Sbjct: 2   NFTGNKPSTPVLDTINHPIHMKNLSVQELDNLVDELREEIVYTVSKTGGHLSSSLGVAEL 61

Query: 131 TVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFN 190
           TVALHHVF+ P DKI+WDVG QTY HKILTGRRS +HT+R+  G++G+  R ESE+D F 
Sbjct: 62  TVALHHVFNTPEDKIIWDVGHQTYPHKILTGRRSRMHTIRQTFGLAGFPKREESEHDAFG 121

Query: 191 AGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
           AGH   S+SA LGMAV RD+ GK   ++ VI +G   AGQAYEAM+NAGYLDSN+I+ILN
Sbjct: 122 AGHSSTSISAALGMAVGRDLLGKDNHVIAVIGDGAMTAGQAYEAMNNAGYLDSNLIIILN 181

Query: 251 DSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKV 309
           D+R  SL     + P   + ALS  L+R+ SS+ FRQLRE AKG+TK+IG    E AAKV
Sbjct: 182 DNRQVSLPTATVDGPAPPVGALSRALTRLHSSRKFRQLREAAKGITKQIGGQTQEIAAKV 241

Query: 310 DEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN 369
           D Y RGM G  G+ LFEELGLYYIGPVDGHN+EDL+ +L++V ++ + GPVL+HV+TE+ 
Sbjct: 242 DSYMRGMTGASGACLFEELGLYYIGPVDGHNVEDLVDLLKKVKAMPAPGPVLIHVITEKG 301

Query: 370 RRAEDTQ----KSEAIEK-----QQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKD 420
           +     +    K   + K      ++  S SN+L +  Y       F E+L+ EAEKD  
Sbjct: 302 KGYTPAEVAADKMHGVVKFDTKTGKQLKSKSNTLSYTQY-------FAESLIAEAEKDDK 354

Query: 421 IVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQR 480
           IV +HA M     L LFQ++FP R FDVG+AEQHAVTF+AGLA  GLKPFC I S+FLQR
Sbjct: 355 IVAIHAAMGGGTGLNLFQKRFPYRCFDVGIAEQHAVTFAAGLATEGLKPFCAIYSSFLQR 414

Query: 481 AYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELV 540
            YDQVV+DVD Q+LPVRF +  AGLVG+DGPT CGAFD TFM+ LPNM+VMAPSDE EL+
Sbjct: 415 GYDQVVHDVDLQKLPVRFALDRAGLVGADGPTHCGAFDTTFMASLPNMVVMAPSDETELI 474

Query: 541 DMVATVASIDDRPVCFRYPRGAIVRTDL-PGYRGIPIEIGKGKVLVEGKDVALLGYGAMV 599
            MVAT A+IDDRP C RYPRG  + + + P  +G P+E+GKG+VL EG  VA+LGYG +V
Sbjct: 475 HMVATAAAIDDRPSCLRYPRGNGIGSIIPPNNKGTPLEVGKGRVLREGSRVAILGYGTIV 534

Query: 600 QNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSH 659
           Q+C++A  LL + GI  TVADARFCKPLD +L+R+L Q H  LITVEEGSIGGF SHVSH
Sbjct: 535 QSCMQAAKLLEETGISATVADARFCKPLDGELIRQLAQEHEVLITVEEGSIGGFSSHVSH 594

Query: 660 FIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
           F++L+GLLD  +KWRP++LPD YI+H S T Q+  AGL+  HIA+TA+SL+G
Sbjct: 595 FLSLNGLLDGNIKWRPMMLPDRYIDHGSQTDQIEEAGLSPKHIASTAMSLVG 646


>gi|242043226|ref|XP_002459484.1| hypothetical protein SORBIDRAFT_02g005380 [Sorghum bicolor]
 gi|241922861|gb|EER96005.1| hypothetical protein SORBIDRAFT_02g005380 [Sorghum bicolor]
          Length = 730

 Score =  763 bits (1971), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/658 (57%), Positives = 474/658 (72%), Gaps = 10/658 (1%)

Query: 69  IDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAV 128
           ID    +K  TP+LD V  PL +K+L+  EL+QLA E+R+E+   VSKT   L SSL  V
Sbjct: 75  IDFTSGEKPATPLLDTVNYPLHMKNLSTSELEQLAAELRAEIVHTVSKTGGHLSSSLGVV 134

Query: 129 ELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDP 188
           EL+VALHHVF  P DKI+WDVG Q Y HKILTGRRS +HT+R+  G++G+  R ES +D 
Sbjct: 135 ELSVALHHVFDTPDDKIIWDVGHQAYGHKILTGRRSRMHTIRQTSGLAGFPKRDESAHDA 194

Query: 189 FNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVI 248
           F  GH   S+SA LGMAVARD+ G++  +V+VI +G   AGQAYEAM+N+G+LD+NMIV+
Sbjct: 195 FGVGHSSTSISAALGMAVARDLLGRKNHVVSVIGDGAMTAGQAYEAMNNSGFLDANMIVV 254

Query: 249 LNDSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAA 307
           LND++  SL     + P   + ALS  L+++QSS  FR+LRE AK +TK+IG   HE AA
Sbjct: 255 LNDNKQVSLPTATLDGPSKPVGALSRALTKLQSSTKFRRLREAAKSVTKQIGGPTHEVAA 314

Query: 308 KVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTE 367
           KVDEYARGM+   GS+LFEELGLYYIGPVDGH++EDL+++ ++V S+ + GPVL+HVVTE
Sbjct: 315 KVDEYARGMMSASGSSLFEELGLYYIGPVDGHSVEDLVTIFEKVKSMPAPGPVLIHVVTE 374

Query: 368 ENRRAEDTQKSEAIEKQQEGA-----SDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIV 422
           + +       +EA   +  G      S    L   + + +Y   F E+L+ EA+ D  +V
Sbjct: 375 KGK---GYPPAEAAADRMHGVVKFEPSTGKQLKSKSSTLSYTQYFAESLIREADADDKVV 431

Query: 423 VVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAY 482
            +HA M     L  FQ++FPER FDVG+AEQHAVTF+AGLA  GLKPFC I S+FLQR Y
Sbjct: 432 AIHAAMGGGTGLNYFQKRFPERCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRGY 491

Query: 483 DQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDM 542
           DQVV+DVD QRLPVRF +  AGLVG+DGPT CGAFD+T+M+CLPNM+VMAP+DE EL+ M
Sbjct: 492 DQVVHDVDLQRLPVRFALDRAGLVGADGPTHCGAFDVTYMACLPNMVVMAPADEAELMHM 551

Query: 543 VATVASIDDRPVCFRYPRGAIVRTDLP-GYRGIPIEIGKGKVLVEGKDVALLGYGAMVQN 601
           VAT A+IDDRP CFR+PRG  V   LP G +G P+E+G+G+VLV G  VALLGYG MVQ 
Sbjct: 552 VATAAAIDDRPSCFRFPRGNGVGAVLPAGNKGTPMEVGRGRVLVGGNRVALLGYGTMVQA 611

Query: 602 CLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFI 661
           CLKA   L +  + VTVADARFCKPLD  L+REL   H  LIT EEGSIGGFGSHV+H++
Sbjct: 612 CLKAAEALKEQDVYVTVADARFCKPLDTGLIRELAAEHEVLITAEEGSIGGFGSHVAHYL 671

Query: 662 ALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLL 719
           +L GLLD  +K R + LPD YI+H +P  Q+  AGLT  HIAAT LSLLGR  EA+ L
Sbjct: 672 SLTGLLDGPLKLRSMFLPDRYIDHGAPQDQMEEAGLTPRHIAATVLSLLGRPMEAMQL 729


>gi|215478266|gb|ACJ67020.1| 1-deoxy-D-xylulose 5-phosphate synthase type II [Pinus taeda]
          Length = 740

 Score =  763 bits (1970), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/660 (57%), Positives = 488/660 (73%), Gaps = 20/660 (3%)

Query: 72  FFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELT 131
           F  +K PTP+LD V  P+ LK+L+I++L+QLA EIR+EL   V+KT   L ++L  V+LT
Sbjct: 85  FPAEKPPTPLLDTVNYPVHLKNLSIQDLEQLATEIRAELVFGVAKTGGHLSANLGVVDLT 144

Query: 132 VALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNA 191
           VALH+VF+ P DKI+WDVG Q+Y +KILTGRRS + TLR+  GI+G+  R ESE+D F A
Sbjct: 145 VALHYVFNTPHDKIVWDVGHQSYPYKILTGRRSKMSTLRQTSGIAGFPRRVESEHDAFGA 204

Query: 192 GHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILND 251
           GH   S+SA +GMAV RD+ GK   ++ VI +G   AGQAYEAM+NAG+LDSNMI+ILND
Sbjct: 205 GHSSTSISAAVGMAVGRDLLGKHNHVIGVIGDGAMTAGQAYEAMNNAGFLDSNMIIILND 264

Query: 252 SRHSLHPKIE-ESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVD 310
           ++    P    + P   + ALSS LS++QSSK  R+LREVAKG+TK++G  MHE AAKVD
Sbjct: 265 NKQVSLPTANLDGPIPPVGALSSALSKLQSSKPLRELREVAKGVTKQLGAPMHELAAKVD 324

Query: 311 EYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR 370
           EYARGMI    S+LF+ELGLYYIGPVDGHNIED++++L+++ S+ + GPVL+H+VTE+ +
Sbjct: 325 EYARGMISGSRSSLFDELGLYYIGPVDGHNIEDMVTILEKIKSMPATGPVLIHLVTEKGK 384

Query: 371 ----RAEDTQKSEAIEK-----QQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDI 421
                 E   K   + K      ++  S S+ L +  Y       F EAL+ EAE D  I
Sbjct: 385 GYPPAEEAADKLHGVVKFDPVTGKQFKSKSSVLSYTQY-------FAEALIAEAEVDSKI 437

Query: 422 VVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRA 481
           V +HA M     L  FQ+KFPER FDVG+AEQHAVTF+AGLA  GLKPFC I S FLQR 
Sbjct: 438 VAIHAAMGGGTGLNYFQKKFPERCFDVGIAEQHAVTFAAGLATEGLKPFCAIYSTFLQRG 497

Query: 482 YDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVD 541
           YDQVV+DVD Q+LPVRF +  AGLVG+DGPT CG+FD+ +M+CLPNMIVMAPSDE EL+ 
Sbjct: 498 YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVAYMACLPNMIVMAPSDEVELMH 557

Query: 542 MVATVASIDDRPVCFRYPRG-AIVRTDLP-GYRGIPIEIGKGKVLVEGKDVALLGYGAMV 599
           +VAT A+IDDRP CFR+PRG  +  ++LP   +G+P+EIGKG++LVEG  VA+LG+G ++
Sbjct: 558 IVATAAAIDDRPSCFRFPRGNGVGLSNLPLNNKGVPLEIGKGRILVEGTRVAILGFGTII 617

Query: 600 QNCLKARALLS-KLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVS 658
           QNCL A  +L+ + GI VT+ADARFCKPLD  L++ L + H  L+TVEEGSIGGFGSHVS
Sbjct: 618 QNCLAAGKILNEQAGISVTIADARFCKPLDGDLIKRLAKEHEILLTVEEGSIGGFGSHVS 677

Query: 659 HFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALL 718
           HF+AL+GLLD  +KWR +VLPD YI+H +P  Q+  AGLT  HIAAT +SLLG+  +ALL
Sbjct: 678 HFLALNGLLDGKLKWRAMVLPDRYIDHGAPKDQIEEAGLTPEHIAATIMSLLGKPHDALL 737


>gi|46361693|gb|AAS89342.1| 1-deoxy-D-xylulose-5-phosphate synthase [Taxus x media]
          Length = 742

 Score =  763 bits (1970), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/653 (57%), Positives = 474/653 (72%), Gaps = 4/653 (0%)

Query: 71  DFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVEL 130
           ++  +K PTP+LD +  P  +K+L +++LKQLA E+R E+   VSKT   L +SL  V+L
Sbjct: 89  EYTGEKPPTPLLDTINYPKHMKNLNVQDLKQLAKELREEIIFGVSKTGGHLSASLGVVDL 148

Query: 131 TVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFN 190
           TVALH+VF+ P DKI+WDVG Q+Y HKILTGRRS + ++R+  GI+G+  R+ESE+D F 
Sbjct: 149 TVALHYVFNTPQDKIVWDVGHQSYPHKILTGRRSNMSSIRQTSGIAGFPKRAESEHDAFG 208

Query: 191 AGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
           AGH   S+SA LGMA  RD+ G     + VI +G   AGQAYEAM+NAG+LDSN+I+ILN
Sbjct: 209 AGHSSTSISAALGMAAGRDLLGLPNHCIAVIGDGAMTAGQAYEAMNNAGFLDSNLIIILN 268

Query: 251 DSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKV 309
           D++  SL     + P   + ALS  LS+IQ+SK FR LRE AK +T++IG   HE AAKV
Sbjct: 269 DNKQVSLPTATVDGPAPPVGALSKALSKIQASKKFRLLREAAKDITQQIGGPTHEIAAKV 328

Query: 310 DEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN 369
           DEYARGMI    STL EELGLYYIGPVDGH+I+DL+++L+ V ++ + GPVL+HVVTE+ 
Sbjct: 329 DEYARGMISAPRSTLLEELGLYYIGPVDGHSIQDLVAILENVKAMPAPGPVLIHVVTEKG 388

Query: 370 RRAEDTQKSEAIEKQQEGASDSNSLPFGNYSRT--YDDCFIEALVMEAEKDKDIVVVHAG 427
           +     +K+            S    F   S T  Y   F E L+ EAEKD  IV +HA 
Sbjct: 389 KGYPPAEKAADRLHGVVKFDPSTGKQFKAKSPTLSYTQYFAEGLIAEAEKDDKIVGIHAA 448

Query: 428 MEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVN 487
           M     L +FQ++FPER FDVG+AEQHAVTF+AGLA  GLKPFC I S+FLQR YDQVV+
Sbjct: 449 MGGGTGLNIFQKRFPERCFDVGIAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGYDQVVH 508

Query: 488 DVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVA 547
           DVD Q+LPVRF +  AGLVG+DGPT CGAFDIT+M+CLPNMIVMAP DE EL+ MVAT A
Sbjct: 509 DVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITYMACLPNMIVMAPCDEAELIHMVATAA 568

Query: 548 SIDDRPVCFRYPRGAIVRTDL-PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
           +IDDRP CFR+PRG  +   L P  +G P+EIGKG++L EG  VA+LG+G+++QNCL AR
Sbjct: 569 AIDDRPSCFRFPRGNGIGVPLPPNNKGTPVEIGKGRILAEGTRVAILGFGSIIQNCLGAR 628

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGL 666
            +L K GI VTVADARFCKPLD  L+R L + H  LITVEEGS+GGFGSHVSHF+AL+GL
Sbjct: 629 EMLEKQGISVTVADARFCKPLDGDLLRRLVKEHEILITVEEGSVGGFGSHVSHFLALNGL 688

Query: 667 LDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLL 719
           LD  +KWRP+VLPD YIEH +P  Q+  AGL+  HIAAT +SL+G+ + A  L
Sbjct: 689 LDGKLKWRPMVLPDRYIEHGAPKDQMDEAGLSSRHIAATVMSLMGKPQAAFDL 741


>gi|356567757|ref|XP_003552082.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic-like [Glycine max]
          Length = 714

 Score =  762 bits (1968), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/653 (56%), Positives = 473/653 (72%), Gaps = 4/653 (0%)

Query: 71  DFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVEL 130
           ++  +K  T +LD +  P+ +K+L+ ++L+QLA E+R+++   VS T   L SSL  VEL
Sbjct: 61  NYAGEKPATLLLDTINYPIHMKNLSTQDLEQLAAELRADIVHTVSNTGGHLSSSLGVVEL 120

Query: 131 TVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFN 190
            VALHHVF+ P DKI+WDVG Q Y HKILTGRRS +HT+RK  G++G+  R ES +D F 
Sbjct: 121 AVALHHVFNTPEDKIIWDVGHQAYPHKILTGRRSRMHTIRKTSGLAGFPKRDESIHDAFG 180

Query: 191 AGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
            GH   S+SAGLGMAVARD+ GK   I++VI +G   AGQAYEAM+NAG+LDSNMIV+LN
Sbjct: 181 VGHSSTSISAGLGMAVARDLLGKNNSIISVIGDGALTAGQAYEAMNNAGFLDSNMIVVLN 240

Query: 251 DSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKV 309
           D++  SL     + P + + ALSS LS+IQ+S  FR+LRE AK +TK+IG+  H+ AAKV
Sbjct: 241 DNKQVSLPTATLDGPASPVGALSSALSKIQASAEFRKLREAAKSITKQIGKQTHQVAAKV 300

Query: 310 DEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN 369
           DEYARG+I     T FEELGLYYIGPVDGH IEDL+++ ++V ++ + GPVL+H VTE+ 
Sbjct: 301 DEYARGIISGSACTFFEELGLYYIGPVDGHKIEDLVTIFEKVKAMPAPGPVLIHCVTEKG 360

Query: 370 RRAEDTQKSEAIEKQQEGASDSNSLPFGNYSRT--YDDCFIEALVMEAEKDKDIVVVHAG 427
           +     +K+                 F   S T  Y   F E+L+ EAE DK IV +HA 
Sbjct: 361 KGYPPAEKASDKMHGVVKFDPKTGEQFKAKSSTLSYTQYFAESLIKEAENDKKIVAIHAA 420

Query: 428 MEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVN 487
           M     L  F ++FPER FDVG+AEQHAVTF+AGLA  GLKPFC I S+FLQR YDQVV+
Sbjct: 421 MGGGTGLNYFHKRFPERCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRGYDQVVH 480

Query: 488 DVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVA 547
           DVD Q+LPVRF +  AGLVG+DGPT CGAFDIT+M+CLPNM+VMAPSDE EL+ MVAT A
Sbjct: 481 DVDLQKLPVRFALDRAGLVGADGPTHCGAFDITYMACLPNMVVMAPSDEAELMHMVATAA 540

Query: 548 SIDDRPVCFRYPRGAIVRTDLP-GYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
           +IDDRP CFR+PRG  +   LP   +G P+EIGKG++LVEG  +A+LGYG++VQ C +A 
Sbjct: 541 AIDDRPSCFRFPRGNGIGATLPLNNKGTPLEIGKGRILVEGSRIAILGYGSVVQQCRQAS 600

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGL 666
            +L +LG+DVTVADARFCKPLD  L+R L + H  LITVEEGSIGGFGSHVS F++L G+
Sbjct: 601 EMLKELGVDVTVADARFCKPLDTGLIRLLAKEHEILITVEEGSIGGFGSHVSQFLSLSGI 660

Query: 667 LDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLL 719
           LD  +KWR ++LPD YIEH SP  Q+  AGL+  HIAAT LSL+ R ++ALL 
Sbjct: 661 LDGPLKWRAMMLPDRYIEHGSPQAQVEDAGLSSKHIAATVLSLMERPKQALLF 713


>gi|225469658|ref|XP_002266925.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic [Vitis vinifera]
 gi|296090521|emb|CBI40852.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score =  761 bits (1966), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/661 (56%), Positives = 478/661 (72%), Gaps = 20/661 (3%)

Query: 71  DFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVEL 130
           +F  +K PTP+LD +  P+ +K+L+ ++L+QLA E+R+++   VSKT   L SSL  VEL
Sbjct: 61  EFTGEKPPTPLLDTINYPVHMKNLSTQDLEQLAAELRADIVQSVSKTGGHLSSSLGVVEL 120

Query: 131 TVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFN 190
           TVALHHVF+ P DKI+WDVG Q Y HKILTGRRS +HT+RK  G++G+  R ES +D F 
Sbjct: 121 TVALHHVFNTPEDKIIWDVGHQAYPHKILTGRRSRMHTIRKTSGLAGFPKREESVHDAFG 180

Query: 191 AGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
            GH   S+SAGLGMAV RD+ GK   +V VI +G   AGQAYEAM+NAGYLD+NMI+ILN
Sbjct: 181 VGHSSTSISAGLGMAVGRDLLGKTNSVVAVIGDGAMTAGQAYEAMNNAGYLDTNMIIILN 240

Query: 251 DSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKV 309
           D++  SL     + P   + ALS TL+++QSS  FR+LRE AK +TK++G    E AAKV
Sbjct: 241 DNKQVSLPTATLDGPAIPVGALSRTLTKLQSSTKFRKLREAAKSITKQLGGQTFEVAAKV 300

Query: 310 DEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN 369
           DEYARG++   GSTLFEELGLYYIGPVDGHN++DL+ + Q+V ++ + GPVL+H+VTE+ 
Sbjct: 301 DEYARGLLSASGSTLFEELGLYYIGPVDGHNVDDLVGIFQKVKAMPAPGPVLIHIVTEKG 360

Query: 370 R----------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDK 419
           +          R     K +    QQ   S S +LP+  Y       F E+L+ EA+ D 
Sbjct: 361 KGYPPAEAAADRMHGVVKFDPKSGQQF-KSKSPTLPYTRY-------FAESLIGEAKVDD 412

Query: 420 DIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQ 479
            IV +HA M     L  FQ++FP+R FDVG+AEQHAVTF+AGLA  GLKPFC I S+FLQ
Sbjct: 413 KIVAIHAAMGGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGLATEGLKPFCAIYSSFLQ 472

Query: 480 RAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDEL 539
           R YDQV++DVD Q+LPVRF +  AGLVG+DGPT CGAFDIT+M+CLPNM+VMAPSDE EL
Sbjct: 473 RGYDQVIHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITYMACLPNMVVMAPSDEAEL 532

Query: 540 VDMVATVASIDDRPVCFRYPRGAIVRTDL-PGYRGIPIEIGKGKVLVEGKDVALLGYGAM 598
           + MVAT A+IDDRP CFR+PRG  +   L P  +G P+EIGKG++L EG  VALLGYG++
Sbjct: 533 MHMVATAAAIDDRPSCFRFPRGNGIGAVLPPDNKGTPLEIGKGRILAEGHRVALLGYGSI 592

Query: 599 VQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVS 658
           VQ C++A ++L    I VTV DARFCKPLD  L+R L + H  LITVEEGSIGGFGSHVS
Sbjct: 593 VQQCVEAASILRSQNIFVTVVDARFCKPLDGDLIRRLAKEHEILITVEEGSIGGFGSHVS 652

Query: 659 HFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALL 718
           HF+ L+G++D  +K R +VLPD YI+H SP  Q+  AGL+  HI+AT LSLLGR +EAL 
Sbjct: 653 HFLCLNGIMDGPLKLRAMVLPDRYIDHGSPEDQIQEAGLSSKHISATVLSLLGRQKEALT 712

Query: 719 L 719
           L
Sbjct: 713 L 713


>gi|340764675|gb|AEK69519.1| 1-deoxy-D-xylulose-5-phosphate synthase 2 [Alpinia officinarum]
          Length = 711

 Score =  761 bits (1965), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/654 (57%), Positives = 465/654 (71%), Gaps = 10/654 (1%)

Query: 71  DFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVEL 130
           D+  +K  TPILD +  P+ +K+L+ ++L+QLA E+R+E+   V+ T   L SSL  V+L
Sbjct: 58  DYSGEKPATPILDTINYPIHMKNLSNQDLEQLAAELRAEIVFTVADTGGHLSSSLGVVDL 117

Query: 131 TVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFN 190
            VALHHVF  P DKI+WDVG Q Y HKILTGRRS +HT+R+ DG++G+  R ESE+D F 
Sbjct: 118 AVALHHVFDTPADKIIWDVGHQAYPHKILTGRRSQMHTIRRTDGLAGFPKREESEHDAFG 177

Query: 191 AGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
            GH   S+SAGLGMAVARD++GK+  ++ VI +G   AGQAYEAM+NAGYLDSN+IV+LN
Sbjct: 178 VGHSSTSISAGLGMAVARDLQGKKSHVIAVIGDGAMTAGQAYEAMNNAGYLDSNLIVVLN 237

Query: 251 DSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKV 309
           D+RH SL     + P T + ALS  L+ +QSS   R LRE AK +TK+IG   +E A+KV
Sbjct: 238 DNRHGSLPTAALDEPATPVGALSKALTTLQSSPKLRMLREAAKSLTKQIGGQTYELASKV 297

Query: 310 DEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN 369
           DEYARGMI   GSTLFEELGLYYIGPVDGHN+EDL+++  +V +L + GPVL+H+VTE+ 
Sbjct: 298 DEYARGMISASGSTLFEELGLYYIGPVDGHNVEDLVTIFDKVKALPAPGPVLIHIVTEKE 357

Query: 370 RRAEDTQKSEAIEKQQEGA-----SDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVV 424
           +   +    EA   +  G               + S +Y  CF E+L+ EAE D  IV V
Sbjct: 358 K---EYPPIEAAADKMHGVMKIDPKTGKQFKTKSPSLSYTQCFAESLIKEAEVDDRIVAV 414

Query: 425 HAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQ 484
           HA M   + L  FQ KFPE+ FDVG+AEQHAVTF+AGLA  GLKPFC I S+FLQR YDQ
Sbjct: 415 HAAMGSGIGLDYFQNKFPEKCFDVGIAEQHAVTFAAGLATEGLKPFCAIHSSFLQRGYDQ 474

Query: 485 VVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVA 544
           VV DVD Q+LPVRF +  AGLVG DGPT  G FDI +M+CLPNM+VMAPSDE EL+ MVA
Sbjct: 475 VVRDVDLQKLPVRFALDWAGLVGGDGPTHSGVFDIAYMACLPNMVVMAPSDEAELMHMVA 534

Query: 545 TVASIDDRPVCFRYPRGAIVRTDL-PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCL 603
           T  +IDDRP CFR+P+G  V   L P ++G P+EIGKGKVL+EG  VA+LGYG++VQ CL
Sbjct: 535 TAVAIDDRPCCFRFPKGTGVGVPLPPNHKGTPLEIGKGKVLMEGNRVAILGYGSIVQTCL 594

Query: 604 KARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIAL 663
           KA   L+  GI  TVADARFCKPLD  L+R+L   H  LITVEEGSIGGFGSHV  F++L
Sbjct: 595 KAADSLTACGIFATVADARFCKPLDAVLIRKLANEHEILITVEEGSIGGFGSHVMQFLSL 654

Query: 664 DGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREAL 717
            G LD  VK R +VLPD YI+H SP  Q   AGLT  HIA T L +LGR +EAL
Sbjct: 655 RGFLDGRVKMRSLVLPDRYIDHGSPEDQFESAGLTFKHIAGTVLQMLGRPKEAL 708


>gi|11691594|emb|CAA09804.2| 1-deoxyxylulose 5-phosphate synthase [Catharanthus roseus]
          Length = 716

 Score =  761 bits (1965), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/693 (54%), Positives = 491/693 (70%), Gaps = 19/693 (2%)

Query: 41  SRINLCPSSSSITSS------KLVTVSRICALPDIDDFFWDKEPTPILDLVENPLRLKSL 94
           +R   C  +SS+ SS      K++++ +      ID F  +K PTP+LD +  P+ +K+L
Sbjct: 28  ARKQFCLRASSVNSSNDAEEGKMISIKKEKDGWKID-FSGEKPPTPLLDTINYPVHMKNL 86

Query: 95  TIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDKILWDVGEQTY 154
           +  +L+QLA E+R+E+   V+KT   L +SL  V+LTVALHHVF+ P D+I+WDVG Q Y
Sbjct: 87  SAHDLEQLAAELRAEIVYSVAKTGGHLSASLGVVDLTVALHHVFNTPEDRIIWDVGHQAY 146

Query: 155 AHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKR 214
            HKILTGRRS +HT+R+  G++G+  R ES YD F AGH   S+SAGLGMAVARDI GK 
Sbjct: 147 PHKILTGRRSKMHTIRQTSGLAGFPKRDESIYDAFGAGHSSTSISAGLGMAVARDILGKN 206

Query: 215 ECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH-SLHPKIEESPKTSINALSS 273
             +++VI +G   AGQAYEAM+NAG+LD+N+IV+LND++  SL     + P T + ALSS
Sbjct: 207 NNVISVIGDGAMTAGQAYEAMNNAGFLDANLIVVLNDNKQVSLPTATLDGPATPVGALSS 266

Query: 274 TLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEELGLYYI 333
            LS++Q+S  FRQLRE AK +TK+IG   HE AAKVDEYARGM+   GSTLFEELGLYYI
Sbjct: 267 ALSKLQASPKFRQLREAAKSITKQIGPQAHEVAAKVDEYARGMLSATGSTLFEELGLYYI 326

Query: 334 GPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRR------AEDTQKSEAIEKQQEG 387
           GPVDGH+IEDL+++ Q+V ++ + GPVL+H+VTE+ +       A D          + G
Sbjct: 327 GPVDGHSIEDLVTIFQKVKAMPAPGPVLIHIVTEKGKGYPPAEVAADKMHGVVKFDPKTG 386

Query: 388 ASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFD 447
               +  P    + +Y   F E+L+ EAE D  I+ +HA M     L  FQ++FP+R FD
Sbjct: 387 KQFKSKSP----TLSYTQYFAESLIKEAEIDNKIIAIHAAMGGGTGLNYFQKRFPDRCFD 442

Query: 448 VGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVG 507
           VG+AEQHAVTF+AGLA  GLKPFC I S+FLQR YDQVV+DVD Q+LPVRF +  AGLVG
Sbjct: 443 VGIAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVG 502

Query: 508 SDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYPRGAIVRTD 567
           +DGPT CGAFD+ +M+CLPNMIVMAPSDE EL+ MVAT A IDDRP CFR+PRG  +   
Sbjct: 503 ADGPTHCGAFDVAYMACLPNMIVMAPSDEAELMHMVATAAKIDDRPCCFRFPRGNGIGVA 562

Query: 568 L-PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKP 626
           L P  +G P+EIGKG++LVEG  VA+LGYG++VQ CL A  +L    +  TVADA+FCKP
Sbjct: 563 LPPNNKGTPLEIGKGRILVEGSRVAILGYGSIVQQCLGAAEMLKSHNVSPTVADAKFCKP 622

Query: 627 LDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHA 686
           LD  L++ L + H  LITVEEGSIGGFGSHV+HF++L G+LD  +K R + LPD YI+H 
Sbjct: 623 LDGDLIKTLAKEHEILITVEEGSIGGFGSHVTHFLSLTGILDGPIKVRSLFLPDRYIDHG 682

Query: 687 SPTQQLALAGLTGHHIAATALSLLGRTREALLL 719
           +P  Q+  AGL+  HI AT LSLLG+ +EAL L
Sbjct: 683 APVDQIEEAGLSSRHICATILSLLGKPKEALKL 715


>gi|224071349|ref|XP_002303416.1| predicted protein [Populus trichocarpa]
 gi|222840848|gb|EEE78395.1| predicted protein [Populus trichocarpa]
          Length = 692

 Score =  761 bits (1965), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/655 (56%), Positives = 480/655 (73%), Gaps = 11/655 (1%)

Query: 71  DFFWDKEP-TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVE 129
           DF   ++P TP+LD ++ P  + +L+ ++L+QLA E+R+++   V+KT   L SSL  VE
Sbjct: 37  DFSSGEKPSTPLLDTIDYPFHMDNLSTQDLEQLASELRADIVYSVAKTGGHLSSSLGVVE 96

Query: 130 LTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPF 189
           L+VALHHVF+ P DKI+WDVG Q Y HKILTGRRS +HT+RK  G++G+  R ES YD F
Sbjct: 97  LSVALHHVFNTPEDKIIWDVGHQAYPHKILTGRRSRMHTIRKTSGLAGFPKRDESVYDAF 156

Query: 190 NAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVIL 249
            AGH   S+SAGLGMAVARD+ GK   +++VI +G   AGQAYEAM+NAG+LDSN+IVIL
Sbjct: 157 GAGHSSTSISAGLGMAVARDLLGKSNHVISVIGDGAMTAGQAYEAMNNAGFLDSNLIVIL 216

Query: 250 NDSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAK 308
           ND++  SL     + P T + ALSSTL+++Q+S  FR+L E AKG+TK+I    H+ AAK
Sbjct: 217 NDNKQVSLPTATLDGPATPVGALSSTLTKLQASAKFRKLHEAAKGITKQIDGQTHQVAAK 276

Query: 309 VDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEE 368
           VDEYARGMI   GSTLFEELGLYYIGPVDGH+IEDL+++ Q V ++ + GPVL+H++TE 
Sbjct: 277 VDEYARGMISASGSTLFEELGLYYIGPVDGHSIEDLVTIFQNVKAMPAPGPVLIHIITE- 335

Query: 369 NRRAEDTQKSEAIEKQQEGA-----SDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVV 423
             + +    +EA   +  G               + + +Y   F E+L+ EAE D  IV 
Sbjct: 336 --KGKGYPPAEAAADKMHGVVKFDVKSGQQFKLKSSTLSYTRYFAESLIKEAEVDNKIVA 393

Query: 424 VHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYD 483
           +HA M     L  FQ++FP+R FDVG+AEQHAVTF+AGLA  GLKPFC I S+FLQR YD
Sbjct: 394 IHAAMGGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGYD 453

Query: 484 QVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMV 543
           QVV+DVD Q+LPVRF +  AGLVG+DGPT CGAFDIT+M+CLPNM+VMAPSDE EL+ MV
Sbjct: 454 QVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITYMACLPNMVVMAPSDEAELMHMV 513

Query: 544 ATVASIDDRPVCFRYPRGAIVRTDL-PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNC 602
           AT A+IDDRP CFR+PRG  + T L P  +GI +EIGKG++L+EG  VA++GYG++VQ C
Sbjct: 514 ATAAAIDDRPSCFRFPRGNGIGTVLPPNNKGIALEIGKGRILMEGNRVAIMGYGSIVQQC 573

Query: 603 LKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIA 662
            +A ++L    I VTVADARFCKPLD  L+R+L + H  LITVEEGSIGGFGSHVSHF++
Sbjct: 574 AEAASMLRTQDISVTVADARFCKPLDTNLIRQLAKEHEILITVEEGSIGGFGSHVSHFLS 633

Query: 663 LDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREAL 717
             G+LD  +K R +VLPD YI+H SP  Q+  AGL+ +HI AT LS+LG+ +EAL
Sbjct: 634 STGILDGPLKLRAMVLPDRYIDHGSPQDQIQEAGLSSNHITATVLSMLGKPKEAL 688


>gi|183206723|gb|ACC54554.1| putative 1-D-deoxyxylulose 5-phosphate synthase type 2 [Pinus
           densiflora]
          Length = 740

 Score =  761 bits (1964), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/660 (56%), Positives = 487/660 (73%), Gaps = 20/660 (3%)

Query: 72  FFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELT 131
           F  +K PTP+LD V  P+ LK+L+I++L+QLA EIR+EL   V+KT   L  SL  V+LT
Sbjct: 85  FPAEKPPTPLLDTVNYPVHLKNLSIQDLEQLATEIRAELVFGVAKTGGHLGGSLGVVDLT 144

Query: 132 VALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNA 191
           VALHHVF +P DKI+WDVG Q+Y HKILTGRRS +HT+R+  G++G+  R ES+YD F A
Sbjct: 145 VALHHVFDSPEDKIIWDVGHQSYPHKILTGRRSKMHTIRQTSGLAGFPKRDESKYDAFGA 204

Query: 192 GHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILND 251
           GH   S+SAGLGMAV RD+  K+  +V VI +G   AGQAYEAM+N+GYL+SN+I+ILND
Sbjct: 205 GHSSTSISAGLGMAVGRDLLKKKNHVVAVIGDGAMTAGQAYEAMNNSGYLESNLIIILND 264

Query: 252 SRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVD 310
           ++  SL     +     + AL+  L+++QSSK  R+LRE AKG+TK+IG   HE A+KVD
Sbjct: 265 NKQVSLPTATLDGAAPPVGALTRALTKLQSSKKLRKLREAAKGLTKQIGGPTHEVASKVD 324

Query: 311 EYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR 370
           +YARG+I P GS+LF+ELGLYYIGPVDGHNIED++++L+++ S+ + GPVL+H+VTE+ +
Sbjct: 325 KYARGLISPAGSSLFDELGLYYIGPVDGHNIEDMVTILEKIKSMPATGPVLIHLVTEKGK 384

Query: 371 ----RAEDTQKSEAIEK-----QQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDI 421
                 E   K   + K      ++  S S+ L +  Y       F EAL+ EAE D  I
Sbjct: 385 GYPPAEEAADKLHGVVKFDPVTGKQFKSKSSVLSYTQY-------FAEALIAEAEVDSKI 437

Query: 422 VVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRA 481
           V +HA M     L  FQ+KFPER  DVG+AEQHAVTF+AGLA  GLKPFC I S FLQR 
Sbjct: 438 VGIHAAMGGGTGLNFFQKKFPERCLDVGIAEQHAVTFAAGLATEGLKPFCAIYSTFLQRG 497

Query: 482 YDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVD 541
           YDQVV+DVD Q+LPVRF +  AGLVG+DGPT CG+FD+ +M+CLPNMIVMAPSDE EL+ 
Sbjct: 498 YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVAYMACLPNMIVMAPSDEVELMH 557

Query: 542 MVATVASIDDRPVCFRYPRG-AIVRTDLP-GYRGIPIEIGKGKVLVEGKDVALLGYGAMV 599
           +VAT A+IDDRP CFR+PRG  +  ++LP   +G+P+EIGKG++LVEG  VA+LG+G ++
Sbjct: 558 IVATAAAIDDRPCCFRFPRGNGVGLSNLPLNNKGVPLEIGKGRILVEGTRVAILGFGTII 617

Query: 600 QNCLKARALLS-KLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVS 658
           QNCL A  +L+ + GI VT+ADARFCKPLD  L++ L + H  L+TVEEGSIGGFGSHVS
Sbjct: 618 QNCLAAGKILNEQAGISVTIADARFCKPLDGDLIKRLAKEHEILLTVEEGSIGGFGSHVS 677

Query: 659 HFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALL 718
           HF+AL+GLLD  +KWR +VLPD YI+H +P  Q+  AGLT  HIAAT +SLLG+  +ALL
Sbjct: 678 HFLALNGLLDGKLKWRAMVLPDRYIDHGAPKDQIEEAGLTPEHIAATIMSLLGKPHDALL 737


>gi|449432964|ref|XP_004134268.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase 2,
           chloroplastic-like [Cucumis sativus]
          Length = 721

 Score =  760 bits (1963), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/655 (56%), Positives = 482/655 (73%), Gaps = 11/655 (1%)

Query: 71  DFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVEL 130
           D+  +K  TP+LD V  P+ +K+L++++L++LA E+R+E+   VSKT   L +SL  VEL
Sbjct: 58  DYSGEKPATPLLDTVNFPIHMKNLSMQDLEKLAAELRAEIVFSVSKTGGHLSASLGVVEL 117

Query: 131 TVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFN 190
            VALHHVF+ P DKI+WDVG Q Y HKILTGRRS +HTLR+  G++G+  R ES +D F 
Sbjct: 118 AVALHHVFNTPDDKIIWDVGHQAYPHKILTGRRSRMHTLRQTSGLAGFPKRDESIHDAFG 177

Query: 191 AGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
           AGH   S+SAGLGMAV RD+ GK+  +++VI +G   AGQAYEAM+NAGYLD+NMIVILN
Sbjct: 178 AGHSSTSISAGLGMAVGRDLLGKKNSVISVIGDGAMTAGQAYEAMNNAGYLDTNMIVILN 237

Query: 251 DSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKV 309
           D++  SL     + P T + ALSS L+++Q+S  FR+LRE AK +TK+IG+  H  AAKV
Sbjct: 238 DNKQVSLPTATLDGPATPVGALSSALTKLQASTQFRKLREAAKTITKQIGKQTHGVAAKV 297

Query: 310 DEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN 369
           DEYARGMI   GST FEELGLYYIGPVDGHN+ DL+++L++V S+ + GPVL+H++TE  
Sbjct: 298 DEYARGMISGSGSTFFEELGLYYIGPVDGHNVGDLVTILEKVKSMPAPGPVLIHILTE-- 355

Query: 370 RRAEDTQKSEAIEKQQEGA---SDSNSLPFGNYSRT--YDDCFIEALVMEAEKDKDIVVV 424
            + +    +EA   +  G           F   S T  Y   F E+L+ EAE D  IV +
Sbjct: 356 -KGKGYPPAEAAADKMHGVVKFDPKTGKQFKTKSPTLSYTQYFAESLIKEAELDDKIVAI 414

Query: 425 HAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQ 484
           HA M     L  FQ+KFP+R FDVG+AEQHAVTF+AGLA  G+KPFC I S+FLQR +DQ
Sbjct: 415 HAAMGGGTGLNYFQKKFPQRCFDVGIAEQHAVTFAAGLATEGIKPFCAIYSSFLQRGFDQ 474

Query: 485 VVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVA 544
           VV+DVD Q+LPVRF +  AGLVG+DGPT CGAFDIT+M+CLPNMIVMAP+DE EL+ MVA
Sbjct: 475 VVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITYMACLPNMIVMAPADEAELIHMVA 534

Query: 545 TVASIDDRPVCFRYPRGAIVRTDL-PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCL 603
           T A IDDRP CFR+PRG  +   + P ++G PIEIGKG++++EG  VA+LGYG++VQ C+
Sbjct: 535 TAAEIDDRPSCFRFPRGNGIGVVVPPNFKGTPIEIGKGRIVMEGTRVAILGYGSIVQQCV 594

Query: 604 KARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIAL 663
           +A  LL   GI  TVADARFCKPLD +L+R+L + H  LITVEEGSIGGFGSHVS+F+++
Sbjct: 595 EASELLKTRGITPTVADARFCKPLDTQLIRQLAKEHEILITVEEGSIGGFGSHVSYFLSV 654

Query: 664 DGLLDS-GVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREAL 717
            G+LD   +K R +VLPD YI+H SP  Q+  AGL+  HIAAT L+L+GR++EAL
Sbjct: 655 TGILDQHHLKLRSMVLPDRYIDHGSPGDQMEEAGLSSEHIAATVLTLMGRSKEAL 709


>gi|147803271|emb|CAN71054.1| hypothetical protein VITISV_003721 [Vitis vinifera]
          Length = 1638

 Score =  760 bits (1962), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/646 (57%), Positives = 466/646 (72%), Gaps = 10/646 (1%)

Query: 71  DFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVEL 130
           +F  +K  TP+LD +  P+  K+L+I EL+ LA E+R E+   VSKT   L SSL   EL
Sbjct: 80  NFSGEKPSTPVLDTINYPIHTKNLSIGELETLAAELREEIVYTVSKTGGHLSSSLGVAEL 139

Query: 131 TVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFN 190
           T+ALHHVF+ P D+I+WDVG Q YAHKILTGRRS +HT+R+  G++G+  R ES YD F 
Sbjct: 140 TIALHHVFNTPDDRIIWDVGHQAYAHKILTGRRSRMHTIRQTCGLAGFPKRDESIYDAFG 199

Query: 191 AGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
           AGH   S+SAGLGMAV RD+ GK   +++VI +G   AGQAYEAM+NAGYLDSN+I+ILN
Sbjct: 200 AGHSSTSISAGLGMAVGRDLLGKNNHVISVIGDGAMTAGQAYEAMNNAGYLDSNLIIILN 259

Query: 251 DSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKV 309
           D+   SL     + P   + ALS  L+ +QSS+ FRQLRE AKG TK++G   HE AAKV
Sbjct: 260 DNGQVSLPTATVDGPAPPVGALSKALTNLQSSRKFRQLREAAKGFTKQVGGQAHEIAAKV 319

Query: 310 DEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN 369
           DEY RGM+G   + LFEELGLYYIGPVDGHN+EDL+ +L++V ++ + GPVLVHV+TE  
Sbjct: 320 DEYMRGMVGGSNACLFEELGLYYIGPVDGHNVEDLVHILKKVRAMPAPGPVLVHVITE-- 377

Query: 370 RRAEDTQKSEAIEKQQEG-----ASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVV 424
            + +    +E    +  G     A     L   + +R+Y   F E+L+ EAE+D++I+ +
Sbjct: 378 -KGKGYAPAEVAADKMHGVVKFDAMSGKQLKTKSKTRSYTQYFAESLIAEAERDENIIAI 436

Query: 425 HAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQ 484
           HA M     L LFQ+ FP+R FDVG+AEQHAVTF+AGLA  GLKPFC I S+FLQR +DQ
Sbjct: 437 HAAMGGGTGLNLFQKHFPDRCFDVGIAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGFDQ 496

Query: 485 VVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVA 544
           V +DVD Q+LPVRF +  AGLVG+DGPT CGAFD TFM+CLPNM+VMAPS E EL+ MVA
Sbjct: 497 VAHDVDLQKLPVRFAVDRAGLVGADGPTHCGAFDTTFMACLPNMVVMAPSCESELMHMVA 556

Query: 545 TVASIDDRPVCFRYPRGAIVRTDLP-GYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCL 603
           T A+IDDRP CFRYPRG  + + LP   +G P+EIGKG+VL EG  VA+LGYG +VQNCL
Sbjct: 557 TAAAIDDRPSCFRYPRGNGIGSILPQNNKGTPLEIGKGRVLKEGSRVAILGYGTVVQNCL 616

Query: 604 KARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIAL 663
            A  LL  LG+  TVADARFCKPLD  L+R+L Q H  LITVEEGSIGGF SHVSHF+ L
Sbjct: 617 AASKLLQVLGVSTTVADARFCKPLDGDLIRQLAQEHEVLITVEEGSIGGFSSHVSHFLGL 676

Query: 664 DGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSL 709
           +GLLD  +KWRP++LPD YI H S T+Q+  AGL+  HIAAT   L
Sbjct: 677 NGLLDGKLKWRPMMLPDRYINHGSQTEQVEEAGLSSRHIAATCCRL 722


>gi|87299429|dbj|BAE79547.1| 1-deoxyxylulose 5-phosphate synthase [Chrysanthemum x morifolium]
          Length = 669

 Score =  760 bits (1962), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/654 (56%), Positives = 477/654 (72%), Gaps = 10/654 (1%)

Query: 71  DFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVEL 130
           D+  +K  TP+LD +  P+ +K+L+ ++L+QLA E+R ++   V+ T   L SSL  VEL
Sbjct: 13  DYTGEKPMTPLLDTINFPVHMKNLSTQDLEQLAAELRVDIVYSVANTGGHLSSSLGVVEL 72

Query: 131 TVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFN 190
            VALHHVF+ P D+I+WDVG Q Y HKILTGRRS ++T+RK  G++G+  R ES +D F 
Sbjct: 73  AVALHHVFNTPDDRIIWDVGHQAYPHKILTGRRSKMNTMRKTSGLAGFPKRDESVHDAFG 132

Query: 191 AGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
           AGH   S+SAGLGMAV RD+ GK   +++VI +G   AGQAYEAM+NAG+LDSN+IV+LN
Sbjct: 133 AGHSSTSISAGLGMAVGRDLLGKNNNVISVIGDGAMTAGQAYEAMNNAGFLDSNLIVVLN 192

Query: 251 DSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKV 309
           D++  SL     + P T + ALSSTL+++Q+S  FR+LRE AK +TK+IG   HE AAKV
Sbjct: 193 DNKQVSLPTATLDGPATPVGALSSTLAKLQASPKFRKLREAAKSITKQIGPQAHEVAAKV 252

Query: 310 DEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN 369
           DEYARGMI   GSTLFEELGLYYIGPVDGHN+EDL+++ ++V S+ + GPVL+H+VTE  
Sbjct: 253 DEYARGMISASGSTLFEELGLYYIGPVDGHNVEDLVTIFEKVKSMPAPGPVLIHIVTE-- 310

Query: 370 RRAEDTQKSEAIEKQQEGASD---SNSLPFGNYSRT--YDDCFIEALVMEAEKDKDIVVV 424
            + +    +EA   +  G           F   S T  Y   F EAL+ EAE D  +V +
Sbjct: 311 -KGKGHPPAEAAADRMHGVVKFDVGTGKQFKTKSPTLSYTQYFAEALIKEAEVDNKVVAI 369

Query: 425 HAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQ 484
           HA M     L  FQ+KFP+R FDVG+AEQHAVTF+AGLA  GLKPFC I S+FLQR YDQ
Sbjct: 370 HAAMGGGTGLNYFQKKFPDRCFDVGIAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGYDQ 429

Query: 485 VVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVA 544
           VV+DVD Q+LPVRF +  AGLVG+DGPT CGAFD+T+M+CLPNM+VMAPSDE EL++MVA
Sbjct: 430 VVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTYMACLPNMVVMAPSDEAELINMVA 489

Query: 545 TVASIDDRPVCFRYPRGAIVRTDLP-GYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCL 603
           T A+IDDRP CFR+PRG  +   LP   +G+PIE+GKG++L+EG  VA+LGYG++VQ CL
Sbjct: 490 TAAAIDDRPSCFRFPRGNGIGVPLPLNNKGVPIEVGKGRILLEGTRVAILGYGSIVQQCL 549

Query: 604 KARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIAL 663
            A +LL    I  TVADARFCKPLD +L++ L   H  L+TVEEGSIGGFGSHV+HF++L
Sbjct: 550 GAASLLQAHNISATVADARFCKPLDAELIKRLANEHEVLLTVEEGSIGGFGSHVAHFLSL 609

Query: 664 DGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREAL 717
           +GLLD  +K R + LPD YI+H +P  QL  AGL+  HI +T LSLLG+ +EAL
Sbjct: 610 NGLLDGKLKLRAMTLPDRYIDHGAPQDQLEEAGLSSKHICSTLLSLLGKPKEAL 663


>gi|209360747|gb|ACI43010.1| 1-deoxy-D-xylulose 5-phosphate synthase [Stevia rebaudiana]
          Length = 715

 Score =  759 bits (1961), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/655 (56%), Positives = 476/655 (72%), Gaps = 12/655 (1%)

Query: 71  DFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVEL 130
           +F  +K  TP+LD +  P+ +K+LT ++L+QLA E+R ++   V+ T   L SSL  VEL
Sbjct: 59  EFAGEKPVTPLLDTINYPVHMKNLTTQDLEQLAAELRQDIVYSVANTGGHLSSSLGVVEL 118

Query: 131 TVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFN 190
           +VALHHVF+ P DKI+WDVG Q Y HKILTGRRS +HT+RK  G++G+  R ES +D F 
Sbjct: 119 SVALHHVFNTPDDKIIWDVGHQAYPHKILTGRRSKMHTIRKTSGLAGFPKRDESAHDAFG 178

Query: 191 AGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
           AGH   S+SAGLGMAV RD+ GK   +++VI +G   AG+AYEA++NAG+LDSN+IV+LN
Sbjct: 179 AGHSSTSISAGLGMAVGRDLLGKTNNVISVIGDGAMTAGRAYEAINNAGFLDSNLIVVLN 238

Query: 251 DSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKV 309
           D++  SL     + P T + ALS  LS++Q+S  FR+LRE AK +TK+IG   HE AAKV
Sbjct: 239 DNKQVSLPTATLDGPATPVGALSGALSKLQASTKFRKLREAAKSITKQIGPQAHEVAAKV 298

Query: 310 DEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN 369
           DEYARGMI   GSTLFEELGLYYIGPVDGHN+EDL+++ ++V S+ + GPVL+H+VTE  
Sbjct: 299 DEYARGMISASGSTLFEELGLYYIGPVDGHNVEDLVNIFEKVKSMPAPGPVLIHIVTE-- 356

Query: 370 RRAEDTQKSEAIEKQQEGASDSNSLPFGNYSRT------YDDCFIEALVMEAEKDKDIVV 423
            + +    +EA   +  G    + +P G   +T      Y   F E+L+ EAE D  IV 
Sbjct: 357 -KGKGYPPAEAAADRMHGVVKFD-VPTGKQFKTKSPTLSYTQYFAESLIKEAEADNKIVA 414

Query: 424 VHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYD 483
           +HA M     L  FQ+K PER FDVG+AEQHAVTF+AGLA  GLKPFC I S+FLQR YD
Sbjct: 415 IHAAMGGGTGLNYFQKKCPERCFDVGIAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGYD 474

Query: 484 QVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMV 543
           QVV+DVD Q+LPVRF +  AGLVG+DGPT CGAFDIT+M+CLPNM+VMAP+DE EL+ MV
Sbjct: 475 QVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITYMACLPNMVVMAPADEAELMHMV 534

Query: 544 ATVASIDDRPVCFRYPRGAIVRTDL-PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNC 602
           AT A+IDDRP CFR+PRG  +   L P  +GIPIE+GKG++L+EG  VA+LGYG++VQ C
Sbjct: 535 ATAAAIDDRPSCFRFPRGNGIGAPLPPNNKGIPIEVGKGRILLEGTRVAILGYGSIVQEC 594

Query: 603 LKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIA 662
           L A +LL    +  TVADARFCKPLD  L+R L   H  L+TVEEGSIGGFGSHV+HF++
Sbjct: 595 LGAASLLQAHNVSATVADARFCKPLDTGLIRRLANEHEVLLTVEEGSIGGFGSHVAHFLS 654

Query: 663 LDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREAL 717
           L+GLLD  +K R + LPD YI+H +P  QL  AGL+  HI ++ LSLLG+ +EAL
Sbjct: 655 LNGLLDGKLKLRAMTLPDKYIDHGAPQDQLEEAGLSSKHICSSLLSLLGKPKEAL 709


>gi|224284202|gb|ACN39837.1| unknown [Picea sitchensis]
          Length = 740

 Score =  759 bits (1961), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/661 (56%), Positives = 485/661 (73%), Gaps = 20/661 (3%)

Query: 71  DFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVEL 130
           DF  +K PTP+LD +  P+ LK+L++++L+QLA EIR+EL   VSKT   L  SL  V+L
Sbjct: 84  DFSAEKPPTPLLDTINYPVHLKNLSVQDLEQLATEIRAELVFGVSKTGGHLGGSLGVVDL 143

Query: 131 TVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFN 190
           TVALHHVF +P D+I+WDVG Q+Y HKILTGRRS +HT+R+  G++G+  R ES+YD F 
Sbjct: 144 TVALHHVFDSPEDRIIWDVGHQSYPHKILTGRRSKMHTIRQTSGLAGFPKRDESKYDAFG 203

Query: 191 AGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
           AGH   S+SAGLGMAV RD+  K   +V VI +G   AGQAYEAM+N+GYL+SN+I+ILN
Sbjct: 204 AGHSSTSISAGLGMAVGRDLLRKSNHVVAVIGDGAMTAGQAYEAMNNSGYLESNLIIILN 263

Query: 251 DSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKV 309
           D++  SL     +     + AL+  L+++QSSK  R+LRE AKG+TK+IG   HE A+KV
Sbjct: 264 DNKQVSLPTATLDGAAPPVGALTRALTKLQSSKKLRKLREAAKGLTKQIGGQTHEMASKV 323

Query: 310 DEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN 369
           D+Y RG+I P  S+LFEELGLYYIGPVDGHNIED++++L+++ S+   GPVL+H+VTE+ 
Sbjct: 324 DKYTRGIINPAASSLFEELGLYYIGPVDGHNIEDMVTILEKIKSMPDSGPVLIHLVTEKG 383

Query: 370 R----RAEDTQKSEAIEK-----QQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKD 420
           +      E   K   + K      ++  S S+ L +  Y       F E+L+ EAE D  
Sbjct: 384 KGYPPAEEAADKLHGVVKFDPATGKQFKSKSSVLSYTQY-------FAESLIAEAEVDSK 436

Query: 421 IVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQR 480
           IV +HA M     L  FQ+KFPER FDVG+AEQHAVTF+AGLA  GLKPFC I S FLQR
Sbjct: 437 IVAIHAAMGGGTGLNYFQKKFPERCFDVGIAEQHAVTFAAGLATEGLKPFCAIYSTFLQR 496

Query: 481 AYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELV 540
            YDQVV+DVD Q+LPVRF +  AGLVG+DGPT CG+FD+ +M+CLPNM+VMAPSDE EL+
Sbjct: 497 GYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVAYMACLPNMVVMAPSDEVELM 556

Query: 541 DMVATVASIDDRPVCFRYPRG-AIVRTDLP-GYRGIPIEIGKGKVLVEGKDVALLGYGAM 598
            MVAT A+IDDRP CFR+PRG  +  ++LP   +G+P+EIG+G++LVEG  VA+LG+G +
Sbjct: 557 HMVATAAAIDDRPSCFRFPRGNGVGLSNLPLNNKGLPLEIGRGRILVEGTRVAILGFGTI 616

Query: 599 VQNCLKARALLS-KLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHV 657
           +QNCL A  +L+ + GI VT+ADARFCKPLD  L++ L + H  L+TVEEGSIGGFGSHV
Sbjct: 617 IQNCLAAGKMLNEQAGISVTIADARFCKPLDGDLIKRLAKEHEILLTVEEGSIGGFGSHV 676

Query: 658 SHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREAL 717
           SHF+AL+GLLD  +KWR +VLPD YI+H +P  Q+  AGL+  HIAAT +SLLG+  +AL
Sbjct: 677 SHFLALNGLLDGKLKWRAMVLPDRYIDHGAPKDQIEEAGLSPKHIAATIMSLLGKPHDAL 736

Query: 718 L 718
           L
Sbjct: 737 L 737


>gi|357111282|ref|XP_003557443.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic-like [Brachypodium distachyon]
          Length = 713

 Score =  759 bits (1960), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/656 (56%), Positives = 476/656 (72%), Gaps = 10/656 (1%)

Query: 71  DFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVEL 130
           D+  +K  TP+LD +  P+ +K+L+  +L+QL+ E+R+E+   VSKT   L +SL  VEL
Sbjct: 60  DYSLEKPETPLLDTINFPVHMKNLSTPDLEQLSSELRAEIVHTVSKTGGHLSASLGVVEL 119

Query: 131 TVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFN 190
           +VALHHVF  P DKI+WDVG Q+Y HKILTGRRS +HT+RK  G++G+  R ES +D F 
Sbjct: 120 SVALHHVFDTPDDKIIWDVGHQSYPHKILTGRRSRMHTIRKTSGLAGFPKRDESAHDAFG 179

Query: 191 AGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
           AGH   S+SA LGMAVARD++GK+  +++VI +G   AGQAYEAM+N+GYLDSNMIV+LN
Sbjct: 180 AGHSSTSISAALGMAVARDLQGKKNHVISVIGDGAMTAGQAYEAMNNSGYLDSNMIVVLN 239

Query: 251 DSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKV 309
           D++  SL     + P   + ALS  L+++QSS  FR+LRE AK +TK+IG   HE AAKV
Sbjct: 240 DNKQVSLPTATMDGPAKPVGALSKALTKLQSSTKFRKLREAAKTITKQIGGSTHEVAAKV 299

Query: 310 DEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN 369
           DEYARGMI   GS+LFEELGLYYIGPVDGH++EDL+++ Q+V S+ + GPVL+H+VTE+ 
Sbjct: 300 DEYARGMISATGSSLFEELGLYYIGPVDGHSLEDLVTIFQKVKSMPAPGPVLIHIVTEKG 359

Query: 370 RRAEDTQKSEAIEKQQEGASDSNSLPFGNY-----SRTYDDCFIEALVMEAEKDKDIVVV 424
           +       +EA   +  G    + +    +     + +Y   F E+L+ EAE D+ +V +
Sbjct: 360 K---GYPPAEAAADKMHGVVKFDPVTGKQFKTKSPTLSYTQYFAESLIREAEADEKVVAI 416

Query: 425 HAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQ 484
           HA M     L  FQ++FPER FDVG+AEQHAVTF+AG+A  G+KPFC I S+FLQR YDQ
Sbjct: 417 HAAMGGGTGLNYFQKRFPERCFDVGIAEQHAVTFAAGMAAEGMKPFCAIYSSFLQRGYDQ 476

Query: 485 VVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVA 544
           VV+DVD QRLPVRF +  AGLVG+DGPT CGAFD+T+M+CLPNM+VMAP+DE EL+ MVA
Sbjct: 477 VVHDVDLQRLPVRFAMDRAGLVGADGPTHCGAFDVTYMACLPNMVVMAPADEAELMHMVA 536

Query: 545 TVASIDDRPVCFRYPRGAIVRTDLPG-YRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCL 603
           T  +IDDRP CFR+PRG  V   LP   +GI ++IGKG+VLV G  VALLGYG MVQ C+
Sbjct: 537 TANAIDDRPSCFRFPRGNGVGAVLPANNKGIAVQIGKGRVLVGGNRVALLGYGTMVQACV 596

Query: 604 KARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIAL 663
           KA  +L +  + VTVADARFCKPLD +L+R+L   H  LIT EEGSIGGFGSHV+H++ L
Sbjct: 597 KAAEMLKEHDVFVTVADARFCKPLDTQLIRDLAAEHEILITAEEGSIGGFGSHVAHYLGL 656

Query: 664 DGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLL 719
            GLLD  +K R + LPD YI+H +   Q+  AGLT  HIAAT LSLLGR  EAL L
Sbjct: 657 SGLLDGHLKLRSMFLPDRYIDHGAAEDQMEEAGLTPRHIAATVLSLLGRPLEALQL 712


>gi|153799536|gb|ABS50519.1| 1-deoxy-D-xylulose 5-phosphate synthase type II [Picea abies]
          Length = 740

 Score =  759 bits (1960), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/708 (53%), Positives = 498/708 (70%), Gaps = 20/708 (2%)

Query: 24  QRKIEFLSSNISRELEISRINLCPSSSSITSSKLVTVSRICALPDIDDFFWDKEPTPILD 83
           Q  I      IS   +  R  L    ++    K+  V     +    DF  +K PTP+LD
Sbjct: 37  QSAIPCTFQQISAATKRKRCILFAKLNNSDGEKMKNVRAAVEIAPKKDFSAEKPPTPLLD 96

Query: 84  LVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVD 143
            +  P+ LK+L++++L+QLA EIR+EL   VSKT   L  SL  V+LTVALHHVF +P D
Sbjct: 97  TINYPVHLKNLSVQDLEQLATEIRAELVFGVSKTGGHLGGSLGVVDLTVALHHVFDSPED 156

Query: 144 KILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLG 203
           +I+WDVG Q+Y HKILTGRRS +HT+R+  G++G+  R ES+YD F AGH   S+SAGLG
Sbjct: 157 RIIWDVGHQSYPHKILTGRRSKMHTIRQTSGLAGFPKRDESKYDAFGAGHSSTSISAGLG 216

Query: 204 MAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH-SLHPKIEE 262
           MAV RD+  K   +V VI +G   AGQAYEAM+N+GYL+SN+I+ILND++  SL     +
Sbjct: 217 MAVGRDLLRKSNHVVAVIGDGAMTAGQAYEAMNNSGYLESNLIIILNDNKQVSLPTATLD 276

Query: 263 SPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQGS 322
                + AL+  L+++QSSK  R+LRE AKG+TK+IG   HE A+KVD+Y RG+I P  S
Sbjct: 277 GAAPPVGALTRALTKLQSSKKIRKLREAAKGLTKQIGGQTHEMASKVDKYTRGIINPAAS 336

Query: 323 TLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR----RAEDTQKS 378
           +LFEELGLYYIGPVDGHNIED++++L+++ S+   GPVL+H+VTE+ +      E   K 
Sbjct: 337 SLFEELGLYYIGPVDGHNIEDMVTILEKIKSMPDSGPVLIHLVTEKGKGYPPAEEAADKL 396

Query: 379 EAIEK-----QQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
             + K      ++  S S+ L +  Y       F E+L+ EAE D  IV +HA M     
Sbjct: 397 HGVVKFDPATGKQFKSKSSVLSYTQY-------FAESLIAEAEVDSKIVAIHAAMGGGTG 449

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L  FQ+KFPER FDVG+AEQHAVTF+AGLA  GLKPFC I S FLQR YDQVV+DVD Q+
Sbjct: 450 LNYFQKKFPERCFDVGIAEQHAVTFAAGLATEGLKPFCAIYSTFLQRGYDQVVHDVDLQK 509

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPVRF +  AGLVG+DGPT CG+FD+ +M+CLPNM+VMAPSDE EL+ MVAT A+IDDRP
Sbjct: 510 LPVRFAMDRAGLVGADGPTHCGSFDVAYMACLPNMVVMAPSDEVELMHMVATAAAIDDRP 569

Query: 554 VCFRYPRG-AIVRTDLP-GYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLS- 610
            CFR+PRG  +  ++LP   +G+P+EIG+G++LVEG  VA+LG+G ++QNCL A  +L+ 
Sbjct: 570 SCFRFPRGNGVGLSNLPLNNKGLPLEIGRGRILVEGTRVAILGFGTIIQNCLAAGKMLNE 629

Query: 611 KLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSG 670
           + GI VT+ADARFCKPLD  L++ L + H  L+TVEEGSIGGFGSHVSHF+AL+GLLD  
Sbjct: 630 QAGISVTIADARFCKPLDGDLIKRLAKEHEILLTVEEGSIGGFGSHVSHFLALNGLLDGK 689

Query: 671 VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALL 718
           +KWR +VLPD YI+H +P  Q+  AGL+  HIAAT +SLLG+  +ALL
Sbjct: 690 LKWRAMVLPDRYIDHGAPKDQIEEAGLSPKHIAATIMSLLGKPHDALL 737


>gi|374639399|gb|AEZ55688.1| putative 1-deoxy-D-xylulose 5-phosphate synthase of [Salvia
           miltiorrhiza]
          Length = 703

 Score =  759 bits (1959), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/653 (57%), Positives = 476/653 (72%), Gaps = 15/653 (2%)

Query: 71  DFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVEL 130
           ++F +K PTP+LD +  P  +K+L++KEL+QLA E+RS+L   VSKT   L S L  +EL
Sbjct: 54  EYFSEKPPTPLLDSINYPNHMKNLSLKELQQLADELRSDLIFNVSKTGGHLGSGLGVIEL 113

Query: 131 TVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFN 190
           TVALH+VF AP D+ILWDVG Q+Y HKILTGRR  + TLR+ DG+SG+T RSES+YD F 
Sbjct: 114 TVALHYVFEAPQDRILWDVGHQSYPHKILTGRRDRMPTLRQTDGLSGFTKRSESDYDCFG 173

Query: 191 AGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
           AGH   ++SAGLGMAV RD+KG++  +V VI +G   AGQAYEAM+NAGYLDS+MIVILN
Sbjct: 174 AGHSSTTISAGLGMAVGRDLKGRKNHVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 233

Query: 251 DSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKV 309
           D++  SL     + P   + ALS  LSR+QS++  R+L E +KG +      MHE AAK 
Sbjct: 234 DNKQVSLPTATLDGPSPPVGALSRALSRLQSNRPLRELGEASKGGS------MHELAAK- 286

Query: 310 DEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN 369
             + RG++   GSTLFEELGLYYIGPVDGHNI DL ++L  V +    GPVL+HVVTE+ 
Sbjct: 287 --HGRGLMSGSGSTLFEELGLYYIGPVDGHNIHDLTTILARVKNTKITGPVLIHVVTEKG 344

Query: 370 RRAEDTQKSEAIEKQQEGASDSNSLPFGNYSRT--YDDCFIEALVMEAEKDKDIVVVHAG 427
           +     +++            +    F   +RT  Y  CF  AL+ EAE D+D+V +HA 
Sbjct: 345 KGYPYAERAADKYHGVSKFDPATGKQFKANARTQSYTTCFARALIAEAEADEDVVAIHAA 404

Query: 428 MEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVN 487
           M     L LF  +FP R FDVG+AEQHAVTF+AGLAC G+KPFC I S+F+QRAYDQVV+
Sbjct: 405 MGGGTGLDLFNHRFPTRCFDVGIAEQHAVTFAAGLACEGIKPFCAIYSSFMQRAYDQVVH 464

Query: 488 DVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVA 547
           DVD Q+LPVRF +  AGLVG+DGPT CGAFD++FM+CLPNM+VMAPSDE EL  MV+T A
Sbjct: 465 DVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVSFMACLPNMVVMAPSDEAELCHMVSTAA 524

Query: 548 SIDDRPVCFRYPRGAIVRTDL-PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
           +IDDRP CFRYPRG  V  +L PG +G+P+E+G+G++LVEG+ VALLGYGA VQ+CL A 
Sbjct: 525 AIDDRPCCFRYPRGDGVGVELPPGNKGVPLEVGRGRILVEGERVALLGYGAAVQSCLAAA 584

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGL 666
           ALL   G+ +TVADARFCKPLD  LVR L + H  LITVEEGS+GGFGSHV+HF+ALDGL
Sbjct: 585 ALLEPHGLRLTVADARFCKPLDRALVRNLARTHDALITVEEGSVGGFGSHVAHFLALDGL 644

Query: 667 LDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG--RTREAL 717
           LD  +KWRP+VLPD Y++H +P  QL   GLT   IAAT  ++LG  ++REAL
Sbjct: 645 LDGNLKWRPLVLPDRYVDHGAPADQLTQVGLTPSCIAATIFNILGSWKSREAL 697


>gi|357478565|ref|XP_003609568.1| 1-deoxy-D-xylulose 5-phosphate synthase [Medicago truncatula]
 gi|355510623|gb|AES91765.1| 1-deoxy-D-xylulose 5-phosphate synthase [Medicago truncatula]
          Length = 672

 Score =  757 bits (1955), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/662 (56%), Positives = 470/662 (70%), Gaps = 53/662 (8%)

Query: 65  ALPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSS 124
           +L ++ +++  + PTP+LD +  P+ +K+L+ K                           
Sbjct: 57  SLSEMGEYYSQRPPTPLLDTINYPIHMKNLSTK--------------------------- 89

Query: 125 LAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSES 184
                             DKILWDVG Q+Y HKILTGRR  +HT+R+ +G+SG+T RSES
Sbjct: 90  ------------------DKILWDVGHQSYPHKILTGRRDKMHTMRQTNGLSGFTKRSES 131

Query: 185 EYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSN 244
           EYD F  GH   ++SAGLGMAV RD+KG++  +V VI +G   AGQAYEAM+NAGYLDS+
Sbjct: 132 EYDSFGTGHSSTTISAGLGMAVGRDLKGRKNDVVAVIGDGAMTAGQAYEAMNNAGYLDSD 191

Query: 245 MIVILNDSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMH 303
           MIVILND++  SL     + P   + ALSS LSR+QS+K  R+LREVAKG+TKRIG  MH
Sbjct: 192 MIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNKPLRELREVAKGVTKRIGGPMH 251

Query: 304 EWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVH 363
           E AAKVDEYARGMI   GSTLFEELGLYYIGPVDGHNI+DL+++L+EV +  S GPVL+H
Sbjct: 252 ELAAKVDEYARGMISGTGSTLFEELGLYYIGPVDGHNIDDLVAILKEVKTTNSTGPVLIH 311

Query: 364 VVTEENRRAEDTQKSEAIEKQQEGAS----DSNSLPFGNYSRTYDDCFIEALVMEAEKDK 419
           V+TE+ R     +K  A +K    A               +++Y   F EAL+ EA+ DK
Sbjct: 312 VITEKGRGYPYAEK--AADKYHGVAKFDPPTGKQFKVAAKTQSYTTYFAEALIAEAKADK 369

Query: 420 DIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQ 479
           DI+ +HA M     + +F  +FP R FDVG+AEQHAVTF+AGLAC GLKPFC I S+FLQ
Sbjct: 370 DIIAIHAAMGGGTGMNIFHRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFLQ 429

Query: 480 RAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDEL 539
           RAYDQVV+DVD Q+LPVRF +  AGLVGSDGPT  G+FD+TFM+CLPNM+VMAPSDE EL
Sbjct: 430 RAYDQVVHDVDLQKLPVRFAMDRAGLVGSDGPTHSGSFDVTFMACLPNMVVMAPSDEAEL 489

Query: 540 VDMVATVASIDDRPVCFRYPRGAIVRTDLPG-YRGIPIEIGKGKVLVEGKDVALLGYGAM 598
             MVAT A+IDDRP CFRYPRG  +  +LP  Y+GIP+EIGKG++L+EG+ VALLGYG+ 
Sbjct: 490 CHMVATAAAIDDRPSCFRYPRGNGIGVELPTEYKGIPLEIGKGRILIEGERVALLGYGSA 549

Query: 599 VQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVS 658
           VQNCL A +L+ + G+ +TVADARFCKPLD  L+R L ++H  LITVEEGSIGGFGSHV+
Sbjct: 550 VQNCLAAASLVEQHGLRLTVADARFCKPLDRSLIRSLAKSHEVLITVEEGSIGGFGSHVA 609

Query: 659 HFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALL 718
            F+ALDGLLD  +KWRP+VLPD YI+H SP  QL +AGLT  HIAAT  ++LG+TREAL 
Sbjct: 610 QFMALDGLLDGNLKWRPVVLPDRYIDHGSPADQLCMAGLTPSHIAATVFNILGQTREALE 669

Query: 719 LM 720
           +M
Sbjct: 670 VM 671


>gi|359485061|ref|XP_002271782.2| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic-like [Vitis vinifera]
          Length = 815

 Score =  757 bits (1955), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/657 (56%), Positives = 468/657 (71%), Gaps = 10/657 (1%)

Query: 71  DFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVEL 130
           +F  +K  TP+LD +  P+ +K+L+I EL+ LA E+R E+   VSKT   L SSL   EL
Sbjct: 160 NFSGEKPSTPVLDTINYPIHMKNLSIGELETLAAELREEIVYTVSKTGGHLSSSLGVAEL 219

Query: 131 TVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFN 190
           T+ALHHVF  P DKI+WDVG Q YAHKILTGRRS +HT+R+  G++G+  R ES YD F 
Sbjct: 220 TIALHHVFDTPEDKIIWDVGHQAYAHKILTGRRSRMHTIRQTCGLAGFPKRDESIYDAFG 279

Query: 191 AGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
           AGH   S+SAGLGMA  RD+ GK   +++VI +G   AGQAYEAM+NAGYLDSN+I+ILN
Sbjct: 280 AGHSSTSISAGLGMAAGRDLLGKNNNVISVIGDGAMTAGQAYEAMNNAGYLDSNLIIILN 339

Query: 251 DSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKV 309
           D+   SL     + P   + ALS  L+ +QSS+ FRQLRE AKG TK +G   HE AAKV
Sbjct: 340 DNGQVSLPTATVDGPAPPVGALSKALTNLQSSRKFRQLREAAKGFTKHVGGQAHEIAAKV 399

Query: 310 DEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN 369
           DEY RG++G   + LFEELGL YIGPVDGHN+EDL+ +L +V  + + GPVLVHV+TE  
Sbjct: 400 DEYMRGIVGGSHACLFEELGLSYIGPVDGHNVEDLVHILTKVRVMPAPGPVLVHVITE-- 457

Query: 370 RRAEDTQKSEAIEKQQEG-----ASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVV 424
            + +    +E    +  G     A     L   + + ++   F E+L+ EAE+D++IV +
Sbjct: 458 -KGKGYAPAEVAADKMHGVVKFDAMSGKQLKTKSKTLSHTQYFAESLIAEAERDENIVAI 516

Query: 425 HAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQ 484
           HA M     L LFQ++FP+R FDVG+AEQHAVTF+AGL   GLKPFC I S+FLQR +DQ
Sbjct: 517 HAAMGGGTGLNLFQKRFPDRCFDVGIAEQHAVTFAAGLDTEGLKPFCAIYSSFLQRGFDQ 576

Query: 485 VVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVA 544
           V +DVD Q+LPVRF +  AGLVG+DGPT CGAFD TFM+CLPNM+VMAPS E EL+ MVA
Sbjct: 577 VAHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDTTFMACLPNMVVMAPSCESELMHMVA 636

Query: 545 TVASIDDRPVCFRYPRGAIVRTDLP-GYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCL 603
           T A+IDDRP CFRYP G  + + LP   +G P+EIGKG+VL EG  VA+LGYG +VQNCL
Sbjct: 637 TAAAIDDRPSCFRYPGGNGIGSILPQNNKGTPLEIGKGRVLKEGSRVAILGYGTIVQNCL 696

Query: 604 KARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIAL 663
            A  LL  LG+  TVADARFCKPLD  L+R+L Q H  LITVEEGSIGGF SHVSHF+ L
Sbjct: 697 AAGKLLQVLGVSTTVADARFCKPLDGDLIRQLAQEHEVLITVEEGSIGGFSSHVSHFLGL 756

Query: 664 DGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLLM 720
           +GLLD  +KWRP++LPD YI H S T+Q   AGL+  HIAAT LS++G  +++L L+
Sbjct: 757 NGLLDGKLKWRPMMLPDRYINHGSQTEQFEEAGLSSRHIAATVLSVMGENKDSLHLL 813


>gi|22797427|emb|CAD22155.2| 1-deoxy-D-xylulose 5-phosphate synthase [Stevia rebaudiana]
          Length = 715

 Score =  757 bits (1954), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/655 (56%), Positives = 475/655 (72%), Gaps = 12/655 (1%)

Query: 71  DFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVEL 130
           +F  +K  TP+LD +  P+ +K+LT ++L+QLA E+R ++   V+ T   L SSL  VEL
Sbjct: 59  EFAGEKPVTPLLDTINYPVHMKNLTTQDLEQLAAELRQDIVYSVANTGGHLSSSLGVVEL 118

Query: 131 TVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFN 190
           +VALHHVF+ P DKI+WDVG Q Y HKILTGRRS +HT+RK  G++G+  R ES +D F 
Sbjct: 119 SVALHHVFNTPDDKIIWDVGHQAYPHKILTGRRSKMHTIRKTSGLAGFPKRDESAHDAFG 178

Query: 191 AGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
           AGH   S+SAGLGMAV RD+ GK   +++VI +G   AG+AYEA++NAG+LDSN+IV+LN
Sbjct: 179 AGHSSTSISAGLGMAVGRDLLGKTNNVISVIGDGAMTAGRAYEAINNAGFLDSNLIVVLN 238

Query: 251 DSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKV 309
           D++  SL     + P T + ALS  LS++Q+S  FR+LRE AK +TK+IG   HE AAKV
Sbjct: 239 DNKQVSLPTATLDGPATPVGALSGALSKLQASTKFRKLREAAKSITKQIGPQAHEVAAKV 298

Query: 310 DEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN 369
           DEYARGMI   GSTLFEELGLYYIGPVDGHN+EDL+++ ++V S+ + GPVL+H+VTE  
Sbjct: 299 DEYARGMISASGSTLFEELGLYYIGPVDGHNVEDLVNIFEKVKSMPAPGPVLIHIVTE-- 356

Query: 370 RRAEDTQKSEAIEKQQEGASDSNSLPFGNYSRT------YDDCFIEALVMEAEKDKDIVV 423
            + +    +EA   +  G    + +P G   +T      Y   F E+L+ EAE D  IV 
Sbjct: 357 -KGKGYPPAEAAADRMHGVVKFD-VPTGKQFKTKSPTLSYTQYFAESLIKEAEADNKIVA 414

Query: 424 VHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYD 483
           +HA M     L  FQ+K PER FDVG+AEQHAVTF+AGLA  GLKPFC I S+FLQR YD
Sbjct: 415 IHAAMGGGTGLNYFQKKCPERCFDVGIAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGYD 474

Query: 484 QVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMV 543
           QVV+DVD Q+LPVRF +  AGLVG+DGPT CGAFDIT+M+CLPNM+VMAP+DE EL+ MV
Sbjct: 475 QVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITYMACLPNMVVMAPADEAELMHMV 534

Query: 544 ATVASIDDRPVCFRYPRGAIVRTDL-PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNC 602
           AT A+IDDRP CFR+PRG  +   L P  +GIPIE+GKG++L+EG  VA+LGYG++VQ C
Sbjct: 535 ATAAAIDDRPSCFRFPRGNGIGAPLPPNNKGIPIEVGKGRILLEGTRVAILGYGSIVQEC 594

Query: 603 LKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIA 662
           L A +LL    +  TVADARFCKPLD  L+R L   H  L+TVEEGSIGGFGSHV+HF++
Sbjct: 595 LGAASLLQAHNVSATVADARFCKPLDTGLIRRLANEHEVLLTVEEGSIGGFGSHVAHFLS 654

Query: 663 LDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREAL 717
           ++GLLD  +K R + LPD YI+H +P  QL   GL+  HI ++ LSLLG+ +EAL
Sbjct: 655 INGLLDGKLKLRAMTLPDKYIDHGAPQDQLEETGLSSKHICSSLLSLLGKPKEAL 709


>gi|326501314|dbj|BAJ98888.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 714

 Score =  757 bits (1954), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/656 (56%), Positives = 472/656 (71%), Gaps = 10/656 (1%)

Query: 71  DFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVEL 130
           ++  DK  TP+LD +  P+ +K+L+  +L+QL+ E+R E+   VSKT   L +SL  VEL
Sbjct: 61  EYSSDKPETPLLDTINYPVHMKNLSTTDLEQLSAELRQEIVHTVSKTGGHLSASLGVVEL 120

Query: 131 TVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFN 190
           +VALHHVF  P DKI+WDVG Q+Y HKILTGRRS +HT+RK  G++G+  R ES +D F 
Sbjct: 121 SVALHHVFDTPEDKIIWDVGHQSYPHKILTGRRSRMHTIRKTSGLAGFPKRDESAHDAFG 180

Query: 191 AGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
            GH   S+SA LGMAVARD++GK+  +++VI +G   AGQAYEAM+N+G+LDSNMIV+LN
Sbjct: 181 VGHSSTSISAALGMAVARDLQGKKNHVISVIGDGAMTAGQAYEAMNNSGFLDSNMIVVLN 240

Query: 251 DSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKV 309
           D++  SL     + P   + ALS  L+++QSS  FR+LRE AK +TK+IG   HE AAKV
Sbjct: 241 DNKQVSLPTATLDGPSKPVGALSKALTKLQSSTKFRRLREAAKTITKQIGGSTHEVAAKV 300

Query: 310 DEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN 369
           DEYARGMI   GSTLFEELGLYYIGPVDGH++EDL+++ ++V S+ + GPVL+H+VTE+ 
Sbjct: 301 DEYARGMISASGSTLFEELGLYYIGPVDGHSLEDLVTIFEKVKSMPAPGPVLIHIVTEKG 360

Query: 370 RRAEDTQKSEAIEKQQEGA---SDSNSLPFGNYSRT--YDDCFIEALVMEAEKDKDIVVV 424
           +       +EA   +  G      +    F   S T  Y   F E+L+ EAE D  +V +
Sbjct: 361 K---GYPPAEAAADKMHGVVKFDPTTGKQFKTKSPTLSYTQYFAESLIREAEGDDKVVAI 417

Query: 425 HAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQ 484
           HA M     L  FQ++FPER FDVG+AEQHAVTF+AGLA  G+KPFC I S+FLQR YDQ
Sbjct: 418 HAAMGGGTGLNYFQKRFPERCFDVGIAEQHAVTFAAGLAAEGMKPFCAIYSSFLQRGYDQ 477

Query: 485 VVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVA 544
           VV+DVD QRLPVRF +  AGLVG+DGPT CGAFD+T+M+CLPNM+VMAP+DE EL+ MVA
Sbjct: 478 VVHDVDLQRLPVRFALDRAGLVGADGPTHCGAFDVTYMACLPNMVVMAPADEAELMHMVA 537

Query: 545 TVASIDDRPVCFRYPRGAIVRTDLP-GYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCL 603
           T  +IDDRP CFR+PRG  V   LP   RG PIE+GKG+VLV G  VAL+GYG MVQ CL
Sbjct: 538 TANAIDDRPSCFRFPRGNGVGAVLPLNNRGTPIEVGKGRVLVRGNRVALVGYGTMVQACL 597

Query: 604 KARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIAL 663
           KA   L +  + +TV DARFCKPLD +L+REL   H  LIT EEGSIGGFGSHV+H+++L
Sbjct: 598 KAAEALKEHDLSITVVDARFCKPLDTELIRELAAEHEILITAEEGSIGGFGSHVAHYLSL 657

Query: 664 DGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLL 719
           +GLLD  +K R + LPD YI+H +   Q+  AGLT  HIAAT LSL+GR  EAL L
Sbjct: 658 NGLLDGPLKLRSMFLPDRYIDHGAADDQMEAAGLTPRHIAATVLSLVGRPLEALHL 713


>gi|297735323|emb|CBI17763.3| unnamed protein product [Vitis vinifera]
          Length = 690

 Score =  755 bits (1950), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/657 (56%), Positives = 468/657 (71%), Gaps = 10/657 (1%)

Query: 71  DFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVEL 130
           +F  +K  TP+LD +  P+ +K+L+I EL+ LA E+R E+   VSKT   L SSL   EL
Sbjct: 35  NFSGEKPSTPVLDTINYPIHMKNLSIGELETLAAELREEIVYTVSKTGGHLSSSLGVAEL 94

Query: 131 TVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFN 190
           T+ALHHVF  P DKI+WDVG Q YAHKILTGRRS +HT+R+  G++G+  R ES YD F 
Sbjct: 95  TIALHHVFDTPEDKIIWDVGHQAYAHKILTGRRSRMHTIRQTCGLAGFPKRDESIYDAFG 154

Query: 191 AGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
           AGH   S+SAGLGMA  RD+ GK   +++VI +G   AGQAYEAM+NAGYLDSN+I+ILN
Sbjct: 155 AGHSSTSISAGLGMAAGRDLLGKNNNVISVIGDGAMTAGQAYEAMNNAGYLDSNLIIILN 214

Query: 251 DSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKV 309
           D+   SL     + P   + ALS  L+ +QSS+ FRQLRE AKG TK +G   HE AAKV
Sbjct: 215 DNGQVSLPTATVDGPAPPVGALSKALTNLQSSRKFRQLREAAKGFTKHVGGQAHEIAAKV 274

Query: 310 DEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN 369
           DEY RG++G   + LFEELGL YIGPVDGHN+EDL+ +L +V  + + GPVLVHV+TE  
Sbjct: 275 DEYMRGIVGGSHACLFEELGLSYIGPVDGHNVEDLVHILTKVRVMPAPGPVLVHVITE-- 332

Query: 370 RRAEDTQKSEAIEKQQEG-----ASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVV 424
            + +    +E    +  G     A     L   + + ++   F E+L+ EAE+D++IV +
Sbjct: 333 -KGKGYAPAEVAADKMHGVVKFDAMSGKQLKTKSKTLSHTQYFAESLIAEAERDENIVAI 391

Query: 425 HAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQ 484
           HA M     L LFQ++FP+R FDVG+AEQHAVTF+AGL   GLKPFC I S+FLQR +DQ
Sbjct: 392 HAAMGGGTGLNLFQKRFPDRCFDVGIAEQHAVTFAAGLDTEGLKPFCAIYSSFLQRGFDQ 451

Query: 485 VVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVA 544
           V +DVD Q+LPVRF +  AGLVG+DGPT CGAFD TFM+CLPNM+VMAPS E EL+ MVA
Sbjct: 452 VAHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDTTFMACLPNMVVMAPSCESELMHMVA 511

Query: 545 TVASIDDRPVCFRYPRGAIVRTDLP-GYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCL 603
           T A+IDDRP CFRYP G  + + LP   +G P+EIGKG+VL EG  VA+LGYG +VQNCL
Sbjct: 512 TAAAIDDRPSCFRYPGGNGIGSILPQNNKGTPLEIGKGRVLKEGSRVAILGYGTIVQNCL 571

Query: 604 KARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIAL 663
            A  LL  LG+  TVADARFCKPLD  L+R+L Q H  LITVEEGSIGGF SHVSHF+ L
Sbjct: 572 AAGKLLQVLGVSTTVADARFCKPLDGDLIRQLAQEHEVLITVEEGSIGGFSSHVSHFLGL 631

Query: 664 DGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLLM 720
           +GLLD  +KWRP++LPD YI H S T+Q   AGL+  HIAAT LS++G  +++L L+
Sbjct: 632 NGLLDGKLKWRPMMLPDRYINHGSQTEQFEEAGLSSRHIAATVLSVMGENKDSLHLL 688


>gi|113473649|gb|ABI35993.1| 1-deoxy-D-xylulose 5-phosphate synthase 2 [Catharanthus roseus]
          Length = 740

 Score =  753 bits (1945), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/657 (56%), Positives = 473/657 (71%), Gaps = 11/657 (1%)

Query: 71  DFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVEL 130
           +F  DK  TPILD +  P  +K+L+++EL+QLA E+R E+   V+KT   L SSL   EL
Sbjct: 86  NFSGDKPFTPILDTINYPTHMKNLSLQELQQLADELREEIVYSVAKTGGHLSSSLGVAEL 145

Query: 131 TVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFN 190
           TVALHHVF  P DKI+WDVG QTY HKILTGRRS +HT+R+  G++G+  R ES +D F 
Sbjct: 146 TVALHHVFETPNDKIIWDVGHQTYGHKILTGRRSKMHTMRQTCGLAGFPKRDESAHDAFG 205

Query: 191 AGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
            GH   S+SAGLGMA+ RD+ GK+  ++TVI +G   AGQAYEAM+NAGYLDSN+I+ILN
Sbjct: 206 VGHSSTSISAGLGMAIGRDLLGKKNHVITVIGDGAMTAGQAYEAMNNAGYLDSNLIIILN 265

Query: 251 DSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKV 309
           D++  SL     + P     ALS+ L+R+QSS+ FR LRE AKG+TK++G  +HE AAKV
Sbjct: 266 DNKQVSLPTATIDGPAPPTGALSNALTRLQSSRKFRLLREAAKGVTKQLGGQVHEMAAKV 325

Query: 310 DEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN 369
           D Y RGM   Q ++LFE+LG+YYIGP+DGHN+EDL+ +L++V S+ + GPVL+H++TE  
Sbjct: 326 DTYMRGM-NSQRASLFEDLGMYYIGPLDGHNMEDLVDILEKVKSVPATGPVLIHIITE-- 382

Query: 370 RRAEDTQKSEAIEKQQEGASDSNSLP---FGNYSRT--YDDCFIEALVMEAEKDKDIVVV 424
            + +    +EA   +  G      +    F + S+T  Y + F E+L+ EA +D  I+ +
Sbjct: 383 -KGKGYPPAEAAADKMHGVVKFEPMTGKQFKSRSKTKSYTNYFAESLISEAREDDKIIAI 441

Query: 425 HAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQ 484
           HA M     L LFQ+ FPER FDVG+AEQHAVTF+AGLA  GLKPFC I S+FLQR YDQ
Sbjct: 442 HAAMGGGTGLNLFQKHFPERCFDVGIAEQHAVTFAAGLASEGLKPFCAIYSSFLQRGYDQ 501

Query: 485 VVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVA 544
           VV+DVD Q++PVRF +  AGLVG+DGPT CG FD TFM+CLPNM+VMAPSDE EL+ MVA
Sbjct: 502 VVHDVDLQKIPVRFAMDRAGLVGADGPTHCGTFDTTFMACLPNMVVMAPSDETELMHMVA 561

Query: 545 TVASIDDRPVCFRYPRGAIVRTDL-PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCL 603
           T A+IDDRP CFRYPRG  +   L P  +G P++IGKG++L+EG  VA+LGYGAMVQNCL
Sbjct: 562 TAAAIDDRPSCFRYPRGNGIGAILPPNNKGAPLQIGKGRILLEGTRVAILGYGAMVQNCL 621

Query: 604 KARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIAL 663
            A  LL   GI  TV DARFCKPLD  L+R+L Q H  LITVEEGSIGGFGSHV+ F+AL
Sbjct: 622 MAAQLLEINGISATVVDARFCKPLDGDLIRKLAQQHEVLITVEEGSIGGFGSHVAQFLAL 681

Query: 664 DGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLLM 720
           +GLLD  +KWR ++LPD YI+H +   Q+  AGLT  HIA T  SLL + +  L ++
Sbjct: 682 NGLLDGNLKWRAMMLPDRYIDHGAQNDQIEEAGLTPKHIAGTVFSLLSKNKNTLQVL 738


>gi|21322715|emb|CAD22531.1| 1-deoxy-D-xylulose 5-phosphate synthase 2 [Medicago truncatula]
 gi|154815950|emb|CAN89180.1| 1-Deoxy-D-xylulose 5-phosphate synthase 2 precursor [Medicago
           truncatula]
          Length = 711

 Score =  753 bits (1944), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/661 (56%), Positives = 475/661 (71%), Gaps = 20/661 (3%)

Query: 71  DFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVEL 130
           +F  +K PTP+LD V  P+ +K+LT ++L+QLA E+R+++   VS T   L SSL  VEL
Sbjct: 58  NFSAEKPPTPLLDTVNFPVHMKNLTTEDLEQLAAELRADIVHSVSDTGGHLSSSLGVVEL 117

Query: 131 TVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFN 190
           +VALHHVF  P DKI+WDVG Q Y HKILTGRRS +HT+RK  G++G+  R ES +D F 
Sbjct: 118 SVALHHVFDTPDDKIIWDVGHQAYPHKILTGRRSRMHTIRKTSGLAGFPKRDESVHDAFG 177

Query: 191 AGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
            GH   S+SAGLGMAVARD+ GK+  +++VI +G   AGQAYEAM+NAG++DSN+IVILN
Sbjct: 178 VGHSSTSISAGLGMAVARDLLGKKNSVISVIGDGAMTAGQAYEAMNNAGFIDSNLIVILN 237

Query: 251 DSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKV 309
           D++  SL     + P T + ALSSTLS+IQ+S+ FR+LRE  K +TK+IG   H  A+KV
Sbjct: 238 DNKQVSLPTATLDGPATPVGALSSTLSKIQASRKFRKLREATKNITKQIGGQTHLVASKV 297

Query: 310 DEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN 369
           D+YAR  I   GS+LFEELG+YYIGP+DGHNIEDL+++ ++V ++ + GPVL+H+VTE+ 
Sbjct: 298 DKYARDFISGSGSSLFEELGMYYIGPMDGHNIEDLVNIFEKVKAMPAPGPVLIHIVTEKG 357

Query: 370 R----------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDK 419
           +          R     K +     Q     S        +  Y   F ++L+ EAE D 
Sbjct: 358 KGYPPALAAADRMHGVVKFDPKTGHQFKPKPS--------TLAYTQYFADSLIKEAEMDN 409

Query: 420 DIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQ 479
            IV +HA M     L  FQ++FP+R FDVG+AEQHAVTF+AGLA  GLKPFC I S+FLQ
Sbjct: 410 KIVAIHAAMGGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQ 469

Query: 480 RAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDEL 539
           R YDQVV+DVD Q+LPVRF +  AGLVG+DGPT CGAFDITFM+CLPNMIVMAPSDE EL
Sbjct: 470 RGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMACLPNMIVMAPSDEAEL 529

Query: 540 VDMVATVASIDDRPVCFRYPRGAIVRTDLP-GYRGIPIEIGKGKVLVEGKDVALLGYGAM 598
           ++MVAT A+IDDRP CFR+PRG  +  +LP   +G P+EIGKG++L+EG  VA+LGYG M
Sbjct: 530 MNMVATAAAIDDRPSCFRFPRGNGIGANLPLNNKGTPLEIGKGRILLEGSRVAILGYGCM 589

Query: 599 VQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVS 658
           VQ C+KA  +L  +G+ VTVADARFCKPLD  L+R L + H  LITVEEGSIGGFGSHVS
Sbjct: 590 VQQCMKAAEMLRAVGVYVTVADARFCKPLDTDLIRLLAREHEILITVEEGSIGGFGSHVS 649

Query: 659 HFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALL 718
            F++L GLLD  +K R ++LPD YI+H +P  Q+  AGL+  HI AT LSLL   +EALL
Sbjct: 650 QFLSLAGLLDGPLKLRSMMLPDRYIDHGAPNDQIDEAGLSSKHILATVLSLLDMPKEALL 709

Query: 719 L 719
            
Sbjct: 710 F 710


>gi|291170708|gb|ADD82535.1| 1-deoxyxylulose-5-phosphate synthase [Narcissus tazetta var.
           chinensis]
          Length = 634

 Score =  749 bits (1934), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/637 (58%), Positives = 463/637 (72%), Gaps = 12/637 (1%)

Query: 91  LKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDKILWDVG 150
           +K+L+ ++L+QLA E+R ++   VSKT   L +SL  V+LTVALHHVF+ P DKI+WDVG
Sbjct: 1   MKNLSTQDLEQLASELRLDIVHSVSKTGGHLSASLGVVDLTVALHHVFNTPDDKIIWDVG 60

Query: 151 EQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDI 210
            Q YAHKILTGRRS +HTLR+  G++G+  R ES +D F AGH   S+SAGLGMAVARD+
Sbjct: 61  HQAYAHKILTGRRSRMHTLRQTSGLAGFPKRDESVHDAFGAGHSSTSISAGLGMAVARDL 120

Query: 211 KGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH-SLHPKIEESPKTSIN 269
            GK   +++VI +G   AGQAYEAM+NAGYLDSN+IV+LND++  SL     + P T + 
Sbjct: 121 LGKGNHVISVIGDGAMTAGQAYEAMNNAGYLDSNLIVVLNDNKQVSLPTATLDGPATPVG 180

Query: 270 ALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEELG 329
           ALS  L+++Q+S  FRQLRE AK +TK+IG   HE AAKVDEYARGMI   G+ LFEELG
Sbjct: 181 ALSGALAKLQASTKFRQLREAAKSITKQIGGQAHEVAAKVDEYARGMISASGACLFEELG 240

Query: 330 LYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR------RAEDTQKSEAIEK 383
           LYYIGPVDGHN+EDL+++ ++V ++ S GPVL+H+VTE+ +       A D         
Sbjct: 241 LYYIGPVDGHNVEDLVAIFKKVKAMPSRGPVLIHIVTEKGKGYPPAEAAADKMHGVVKFD 300

Query: 384 QQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPE 443
            + G       P    + +Y   F E+LV EAE D  I+ +HA M     L  FQ+KFP+
Sbjct: 301 PKTGKQFKTKFP----TLSYTQYFAESLVKEAEVDDKIIAIHAAMGGGTGLNFFQKKFPD 356

Query: 444 RYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSA 503
           R FDVG+AEQHAVTF+AGLA  GLKPFC I S+FLQR YDQVV+DVD Q+LPVRF +  A
Sbjct: 357 RCFDVGIAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFALDRA 416

Query: 504 GLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYPRGAI 563
           GLVG+DGPT CGAFD+T+M+CLPNMIVMAPSDE EL+ MVAT A+IDDRP CFR+PRG  
Sbjct: 417 GLVGADGPTHCGAFDVTYMACLPNMIVMAPSDEAELMHMVATAAAIDDRPSCFRFPRGNG 476

Query: 564 VRTDLPG-YRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADAR 622
           V   LP  Y+G P+EIGKG++L EG+ VA+LGYG++VQ+CLKA  LL + GI  TVAD R
Sbjct: 477 VGVALPSDYKGTPLEIGKGRILREGERVAILGYGSIVQSCLKAADLLREHGISATVADGR 536

Query: 623 FCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNY 682
           FCKPLD +L+R L   H  LIT EEGSIGGF SHVSHF++L+GLLD  +K R +VLPD Y
Sbjct: 537 FCKPLDSELIRRLVNEHEILITAEEGSIGGFASHVSHFLSLNGLLDGHLKLRSMVLPDRY 596

Query: 683 IEHASPTQQLALAGLTGHHIAATALSLLGRTREALLL 719
           I+H +   Q+  AGL+  HIA T LSLLGR  EA  L
Sbjct: 597 IDHGALKDQIEEAGLSSKHIAGTVLSLLGRPMEAFQL 633


>gi|154815951|emb|CAN89181.1| 1-Deoxy-D-xylulose 5-phosphate synthase 2 precursor [Medicago
           truncatula]
          Length = 710

 Score =  749 bits (1933), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/661 (55%), Positives = 473/661 (71%), Gaps = 20/661 (3%)

Query: 71  DFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVEL 130
           +F  +K PTP+LD V  P+ +K+LT ++L+QLA E+R+++   VS T   L SSL  VEL
Sbjct: 58  NFSAEKPPTPLLDTVNFPVHMKNLTTEDLEQLAAELRADIVHSVSDTGGHLSSSLGVVEL 117

Query: 131 TVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFN 190
           +VALHHVF  P DKI+WDVG Q Y HKILTGRRS +HT+RK  G++G+  R ES +D F 
Sbjct: 118 SVALHHVFDTPDDKIIWDVGHQAYPHKILTGRRSRMHTIRKTSGLAGFPKRDESVHDAFG 177

Query: 191 AGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
            GH   S+SAGLGMA+ARD+ GK+  +++VI +G   AGQAYEA++NAG+LDSN+IVILN
Sbjct: 178 VGHSSTSISAGLGMAIARDLLGKKNSVISVIGDGAMTAGQAYEALNNAGFLDSNLIVILN 237

Query: 251 DSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKV 309
           D++  SL     + P T + ALSSTLS+IQ+S+ FR+LRE  K +TK+IG   H  A+KV
Sbjct: 238 DNKQVSLPTATLDGPATPVGALSSTLSKIQASRKFRKLREATKNITKQIGGQTHLVASKV 297

Query: 310 DEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN 369
           D+YAR  I   GS+LFEELG+YYIGP+DGHNIEDL+++ ++V +  + GPVL+H+VTE+ 
Sbjct: 298 DKYARDFISGSGSSLFEELGMYYIGPMDGHNIEDLVNIFEKVKATPASGPVLIHIVTEKG 357

Query: 370 R----------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDK 419
           +          R     K +     Q     S        +  Y   F ++L+ EAE D 
Sbjct: 358 KGYPPAVAAADRMHGVVKFDPKTGHQFKPKPS--------TLAYTQYFADSLIKEAEMDN 409

Query: 420 DIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQ 479
            IV +HA M     L  FQ++FP+R FDVG+AEQHAVTF+AGLA  GLKPFC I S FLQ
Sbjct: 410 KIVAIHAAMGGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGLATEGLKPFCAIYSTFLQ 469

Query: 480 RAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDEL 539
           R YDQVV+DVD Q+LPVRF +  AGLVG+DGPT CGAFDITFM+CLPNMIVMAPSDE EL
Sbjct: 470 RGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMACLPNMIVMAPSDEAEL 529

Query: 540 VDMVATVASIDDRPVCFRYPRGAIVRTDLPGY-RGIPIEIGKGKVLVEGKDVALLGYGAM 598
           ++MVAT A+IDDRP CFR+PRG  +  DLP + +G P+EIGKG++L+EG  VA+LGYG M
Sbjct: 530 MNMVATAAAIDDRPSCFRFPRGNGIGADLPLHNKGTPLEIGKGRILLEGSRVAILGYGCM 589

Query: 599 VQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVS 658
           VQ C+KA  +L  +G+ VTV+DARFCKPLD  L+R L + H  LITVEEGSIGGFGSHVS
Sbjct: 590 VQQCMKAAEMLRAVGVYVTVSDARFCKPLDTDLIRLLAREHEILITVEEGSIGGFGSHVS 649

Query: 659 HFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALL 718
            F++L GLLD  +K R ++LPD YI+H +P  Q+  AGL+  HI AT LSLL   +EAL 
Sbjct: 650 QFLSLAGLLDGPLKLRSMMLPDRYIDHGAPNDQIDEAGLSSKHILATVLSLLEMPKEALF 709

Query: 719 L 719
            
Sbjct: 710 F 710


>gi|9971824|gb|AAG10432.1| 1-deoxy-D-xylulose-5-phosphate synthase [Tagetes erecta]
          Length = 725

 Score =  748 bits (1931), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/654 (55%), Positives = 469/654 (71%), Gaps = 12/654 (1%)

Query: 72  FFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELT 131
           +  DK  TPILD +  P+ +K+L ++EL +LA E+R E+   VSKT   L SSL  VELT
Sbjct: 71  YSGDKPKTPILDTINYPIHMKNLCVEELVKLADELREEIVYTVSKTGGHLSSSLGVVELT 130

Query: 132 VALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNA 191
           V+LHHVF+ P DKI+WDVG Q Y HKILTGRRS + T+R+  G++G+  R ES +D F A
Sbjct: 131 VSLHHVFNTPEDKIIWDVGHQAYPHKILTGRRSRMRTIRQTFGLAGFPKRDESNHDAFGA 190

Query: 192 GHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILND 251
           GH   S+SAGLGMAV RD+ GK   ++ VI +G   AGQAYEAM+NAGYLDSN+I++LND
Sbjct: 191 GHSSTSISAGLGMAVGRDLLGKNNHVIAVIGDGAMTAGQAYEAMNNAGYLDSNLIIVLND 250

Query: 252 SRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVD 310
           +R  SL     + P   + ALS +L+R+Q+S+ FRQLRE AK +TK++G   HE AAK+D
Sbjct: 251 NRQVSLPTATIDGPAPPVGALSRSLTRLQTSQKFRQLREAAKEVTKQLGDKTHEVAAKMD 310

Query: 311 EYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR 370
              +GM+G QG+++FEELGLYY+GPVDGHN+EDL+ V  ++ S+ + GPVLVH+VTE+ +
Sbjct: 311 SLVKGMVGGQGASMFEELGLYYVGPVDGHNLEDLVYVFDKIKSMTAPGPVLVHIVTEKGK 370

Query: 371 R------AEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVV 424
                  A D          Q G    N       + +Y   F+++LV EA++D  IV +
Sbjct: 371 GYPPAEVAADKMHGVVKFDTQTGKQKKNK----TKTLSYTQYFVDSLVAEAKEDDKIVAI 426

Query: 425 HAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQ 484
           HA M     L  FQ++FP R FDVG+AEQHA+TF+AGLA  GLKPFC I S+FLQR YDQ
Sbjct: 427 HAAMGGGTGLNTFQKEFPARCFDVGIAEQHAITFAAGLATEGLKPFCAIYSSFLQRGYDQ 486

Query: 485 VVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVA 544
           VV+DVD Q+LPVRF +  AGLVG+DGPT CGAFD TFM+CLPNM+VMAPS E EL++MVA
Sbjct: 487 VVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDTTFMACLPNMVVMAPSCEAELMNMVA 546

Query: 545 TVASIDDRPVCFRYPRGAIVRTDLPG-YRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCL 603
           T  +IDDRP CFRYPRG  + + LP   +G  IE+G G+V+ EG  VALLGYG +VQ+CL
Sbjct: 547 TAVAIDDRPSCFRYPRGNGIGSILPANNKGTLIEVGTGRVIKEGNRVALLGYGTIVQSCL 606

Query: 604 KARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIAL 663
            A  +L K+GI VTVADARFCKPLD  L+++L   H  LITVEEGSIGGF SHVSHF+AL
Sbjct: 607 AASEVLKKIGISVTVADARFCKPLDGNLIKQLANEHEVLITVEEGSIGGFSSHVSHFLAL 666

Query: 664 DGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREAL 717
           +GLLD  +KWR ++LPD YIEH + + Q+  AGL+  HIAAT LSL+G ++E L
Sbjct: 667 NGLLDGHLKWRAMMLPDRYIEHGAQSDQIEEAGLSSKHIAATVLSLIGGSKETL 720


>gi|16930804|gb|AAL32062.1|AF443590_1 deoxy-D-xylulose-5-phosphate synthase [Morinda citrifolia]
          Length = 722

 Score =  747 bits (1928), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/687 (55%), Positives = 484/687 (70%), Gaps = 20/687 (2%)

Query: 46  CPSSSSITSSKLVTVSRICALPDIDDFFWDKEPTPILDLVENPLRLKSLT------IKEL 99
           C ++  + +S+ V  S    L +  +++  + PTP+LD +  P+ +K+L+      I+EL
Sbjct: 42  CQNNQVMKNSRRVRAS----LSERGEYYSQRPPTPLLDTINYPIHMKNLSTKSHYLIQEL 97

Query: 100 KQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKIL 159
           KQLA E+RS++   VSKT   L SSL  VELTVALH+ F+ P DKI+WDVG Q Y HKIL
Sbjct: 98  KQLADELRSDIIFNVSKTGGHLGSSLGVVELTVALHYAFNCPQDKIVWDVGHQAYPHKIL 157

Query: 160 TGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVT 219
           TGRRS + T+R+  GI+G+  R ES YD F AGH   S+SAGLGMAV RD+ GK   +++
Sbjct: 158 TGRRSKMQTIRQTYGIAGFPKRDESVYDAFGAGHSSTSISAGLGMAVGRDLLGKNNNVIS 217

Query: 220 VISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH-SLHPKIEESPKTSINALSSTLSRI 278
           VI +G   AGQAYEAM+NAG+LD+N+IVILND++  SL     + P T + ALSS L+++
Sbjct: 218 VIGDGAMTAGQAYEAMNNAGFLDANLIVILNDNKQVSLPTGTLDGPATPVGALSSALTKL 277

Query: 279 QSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDG 338
           Q+S  FRQLRE AK +TK+IG   HE AAKVDEYARG+I   GST FEELGLYYIGPVDG
Sbjct: 278 QASPKFRQLREAAKSITKQIGPQAHEVAAKVDEYARGLISASGSTFFEELGLYYIGPVDG 337

Query: 339 HNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSEAIEKQQEGASD---SNSLP 395
           HNIEDLI++  +V ++ + GPVL+H+VTE   + +    +EA   +  G      ++   
Sbjct: 338 HNIEDLITIFDKVKTMPAPGPVLIHIVTE---KGKGYPPAEAAADRMHGVVKFDVASGKQ 394

Query: 396 FGNYSRT--YDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQ 453
           F + S T  Y   F EAL+ EAE D  IV +HA M     L  FQ+ FPER FDVG+AEQ
Sbjct: 395 FKSKSPTLSYTQYFAEALIKEAEIDNKIVAIHAAMGGGTGLNYFQKIFPERCFDVGIAEQ 454

Query: 454 HAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQ 513
           HAVTF+AGLA  GLKPFC I S+FLQR YDQVV+DVD Q+LPVRF +  AGLVG+DGPT 
Sbjct: 455 HAVTFAAGLATEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTH 514

Query: 514 CGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYPRGAIVRTDL-PGYR 572
           CGAFD+ +M+CL NMIVMAP+DE EL+ MVAT A+IDDRP CFR+PRG  +   L P  +
Sbjct: 515 CGAFDVAYMACLSNMIVMAPADEAELMHMVATAATIDDRPCCFRFPRGNGIGAKLPPDNK 574

Query: 573 GIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLV 632
           G  I IGKG++L EG  VA++GYGA+VQ CL A  +L    I  T+ADARFCKPLD +L+
Sbjct: 575 GNLIGIGKGRILTEGSRVAIIGYGAIVQQCLGAAEMLKLHNIKPTIADARFCKPLDGELI 634

Query: 633 RELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQL 692
           + L + H  LITVEEGSIGGFGSHVSHF++L GLLD  +K R +VLPD YI+H SP  Q+
Sbjct: 635 KRLAKEHEILITVEEGSIGGFGSHVSHFLSLSGLLDGPIKLRSMVLPDRYIDHGSPADQI 694

Query: 693 ALAGLTGHHIAATALSLLGRTREALLL 719
             AGL+  HI AT LSLLG+ +EAL L
Sbjct: 695 EQAGLSSRHICATVLSLLGKPKEALQL 721


>gi|356564868|ref|XP_003550669.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic-like [Glycine max]
          Length = 728

 Score =  747 bits (1928), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/657 (55%), Positives = 469/657 (71%), Gaps = 10/657 (1%)

Query: 71  DFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVEL 130
           +F  +K  TP+LD +  P+ +K+L+I+EL++LA E+R E+   +SKT   L SSL   EL
Sbjct: 71  NFSGEKPSTPVLDTINYPIHMKNLSIQELEELADELREEIVYTLSKTGGHLSSSLGVAEL 130

Query: 131 TVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFN 190
           TVALHHVF+ P DKI+WDVG +TYAHKILTGRRS +HT+R+  G++G+  R ES +D F 
Sbjct: 131 TVALHHVFNTPQDKIVWDVGHRTYAHKILTGRRSKMHTIRQTGGLAGFPKRDESLHDAFG 190

Query: 191 AGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
            GH   S+SA LGMAVARD+ GK   +++VI +G    GQAYEAM+NAG+LD+N+I+ILN
Sbjct: 191 VGHSSTSISASLGMAVARDLIGKDNHVISVIGDGAMTGGQAYEAMNNAGFLDTNLIIILN 250

Query: 251 DSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKV 309
           D+   SL     + P   + ALS  L+R+ +S  F QLR++AKG+TK+IG   +E+ +K+
Sbjct: 251 DNEQVSLPTATIDGPAPPVGALSRALARLNTSSKFHQLRDLAKGITKQIGSRAYEFTSKL 310

Query: 310 DEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN 369
           D Y RGM+G  G+ LFEELGL+YIGPVDGH+IEDL+ +L+ V  + ++GPVL+HV+TE  
Sbjct: 311 DSYLRGMVGGAGACLFEELGLFYIGPVDGHDIEDLVHILKSVKGMPTLGPVLIHVITE-- 368

Query: 370 RRAEDTQKSEAIEKQQEGA-----SDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVV 424
            + +    +E    +  G           L     +R+Y   F E+L  EAE D+ IV +
Sbjct: 369 -KGKGYHPAEVAPDKMHGVVKFDPKSGKQLKSKASTRSYTQYFAESLTAEAEVDEKIVAI 427

Query: 425 HAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQ 484
           HA M     L LFQ++FPER FDVG+AEQHAVTF+AGLA  GLKPFC I S+FLQR YDQ
Sbjct: 428 HAAMGGGTGLNLFQKRFPERCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRGYDQ 487

Query: 485 VVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVA 544
           V +DVD Q+LPVRF +  AGLVG+DGPT CGAFD TFM+CLPNM+VMAPSDE EL+ M+A
Sbjct: 488 VAHDVDLQKLPVRFALDRAGLVGADGPTHCGAFDTTFMACLPNMVVMAPSDETELMHMIA 547

Query: 545 TVASIDDRPVCFRYPRGAIVRTDL-PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCL 603
           T A+IDDRP CFRYPRG  + T L P  +G P+E+GKG+VL EG  VAL+GYG MVQ+C+
Sbjct: 548 TAAAIDDRPSCFRYPRGNGIGTILPPNNKGTPLEVGKGRVLKEGSRVALVGYGTMVQSCM 607

Query: 604 KARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIAL 663
           +A  +L   GI  TV DARFCKPLD  L+R L + H  LITVEEGSIGGFGSHVSHF+ L
Sbjct: 608 EAAKVLEAHGISTTVVDARFCKPLDGDLMRRLAREHEILITVEEGSIGGFGSHVSHFLGL 667

Query: 664 DGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLLM 720
           +GLLD  +KWR + LPD YI H S T Q+ +AGL+ +HIA TALSL     ++ LL+
Sbjct: 668 NGLLDGNLKWRALTLPDRYINHGSQTDQIQMAGLSSNHIAVTALSLTNVHWDSRLLL 724


>gi|414883878|tpg|DAA59892.1| TPA: 1-deoxy-D-xylulose 5-phosphate synthase [Zea mays]
          Length = 727

 Score =  746 bits (1927), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/657 (57%), Positives = 476/657 (72%), Gaps = 11/657 (1%)

Query: 71  DFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVEL 130
           DF  +K PTP+LD V  PL +K+L+I EL+QLA E+R+E+   VSKT   L SSL  VEL
Sbjct: 73  DFSGEKPPTPLLDTVNYPLHMKNLSILELEQLAAELRAEVVHTVSKTGGHLSSSLGVVEL 132

Query: 131 TVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFN 190
           +VALHHVF  P DKI+WDVG Q Y HKILTGRRS +HT+R+  G++G+  R ES +D F 
Sbjct: 133 SVALHHVFDTPEDKIIWDVGHQAYPHKILTGRRSRMHTIRQTSGLAGFPKRDESAHDAFG 192

Query: 191 AGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
            GH   S+SA LGMAVARD+ G++  +++VI +G   AGQAYEAM+N+GYLD+NMIV+LN
Sbjct: 193 VGHSSTSISAALGMAVARDLLGRKNHVISVIGDGAMTAGQAYEAMNNSGYLDANMIVVLN 252

Query: 251 DSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKV 309
           D++  SL     + P   + ALS  L+++QSS  FR+LRE AK +TK+IG   HE AAKV
Sbjct: 253 DNKQVSLPTATLDGPSKPVGALSRALTKLQSSTKFRRLREAAKSVTKQIGGPTHEVAAKV 312

Query: 310 DEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN 369
           DEYARGMI   GS+LFEELGLYYIGPVDGH +EDL+++ ++V S+ + GPVL+H+VTE+ 
Sbjct: 313 DEYARGMISASGSSLFEELGLYYIGPVDGHCVEDLVTIFEKVKSMPAPGPVLIHIVTEKG 372

Query: 370 RRAEDTQKSEAIEKQQEGA-----SDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVV 424
           +       +EA   +  G      +    L   + + +Y   F E+L+ EAE D+ +V +
Sbjct: 373 K---GYPPAEAAADRMHGVVKFEPATGRQLKSKSPTLSYTQYFAESLIREAESDEKVVAI 429

Query: 425 HAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQ 484
           HA M     L  FQ++FPER FDVG+AEQHAVTF+AGLA  GLKPFC I S+FLQR YDQ
Sbjct: 430 HAAMGGGTGLNYFQKRFPERCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRGYDQ 489

Query: 485 VVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVA 544
           VV+DVD QRLPVRF +  AGLVG+DGPT CGAFD+ +M+CLPNM+VMAP+DE EL+ MVA
Sbjct: 490 VVHDVDLQRLPVRFALDRAGLVGADGPTHCGAFDVAYMACLPNMVVMAPADEAELMHMVA 549

Query: 545 TVASIDDRPVCFRYPRGAIVRTDL-PGYRGIPIEIGKGKVLVEGKD-VALLGYGAMVQNC 602
           T A+IDDRP CFR+PRG  V   L PG +G+ +E+G+G+VLV G   VALLGYGAMVQ C
Sbjct: 550 TAAAIDDRPSCFRFPRGNGVGAALPPGNKGVALEVGRGRVLVGGGTRVALLGYGAMVQAC 609

Query: 603 LKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIA 662
           LKA   L +  + VTVADARFCKPLD  L+REL   H  LIT EEGSIGGFGSHV+H+++
Sbjct: 610 LKAAEALKEHDVYVTVADARFCKPLDTALIRELAAEHEVLITAEEGSIGGFGSHVAHYLS 669

Query: 663 LDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLL 719
           L GLLD  +K R + LPD YI+H +P  Q+  AGLT  HIAAT LSLLGR  EA+ L
Sbjct: 670 LTGLLDGPLKLRSMFLPDRYIDHGAPQDQIEEAGLTPRHIAATVLSLLGRPLEAMQL 726


>gi|3114573|gb|AAC33513.1| 1-deoxyxylulose-5-phosphate synthase [Mentha x piperita]
          Length = 724

 Score =  746 bits (1927), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/656 (53%), Positives = 475/656 (72%), Gaps = 10/656 (1%)

Query: 72  FFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELT 131
           F  +K P PILD +  P  +K+L+++EL  LA E+R E+   VSKT   L SSL   ELT
Sbjct: 69  FTGEKPPIPILDTINYPNHMKNLSVEELANLADELREEIVYTVSKTGGHLSSSLGVSELT 128

Query: 132 VALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNA 191
           VALHHVF+ P DKI+WDVG Q Y HKILTGRR+ +HT+R+  G++G+  R ES +D F A
Sbjct: 129 VALHHVFNTPDDKIIWDVGHQAYPHKILTGRRARMHTIRQTFGLAGFPKRDESAHDAFGA 188

Query: 192 GHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILND 251
           GH   S+SAGLGMAVARD+  K   +++VI +G   AGQAYEA++NAG+LDSN+I++LND
Sbjct: 189 GHSSTSISAGLGMAVARDLLQKNNHVISVIGDGAMTAGQAYEALNNAGFLDSNLIIVLND 248

Query: 252 SRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVD 310
           ++  SL     + P   + ALS  L+++Q+S+ FRQLRE AK MTK++G   HE A+K+ 
Sbjct: 249 NKQVSLPTATVDGPAPPVGALSKALTKLQASRKFRQLREAAKSMTKQMGAPAHEIASKLT 308

Query: 311 EYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR 370
           +Y +GM+G  G++LFEELG+YYIGPVDGHN+EDL+ + ++V  + + GPVL+H++TE   
Sbjct: 309 QYVKGMMGKPGASLFEELGIYYIGPVDGHNVEDLVYIFKKVKEMPAPGPVLIHIITE--- 365

Query: 371 RAEDTQKSEAIEKQQEG-----ASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVH 425
           + +    +E    +  G     A     +   N +++Y   F E+LV EAE D  IV +H
Sbjct: 366 KGKGYPPAEIAADKMHGVVKFDAKTGKQMKTKNKTKSYTQYFAESLVAEAEHDDKIVAIH 425

Query: 426 AGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQV 485
           A M     L +FQ++FP+R FDVG+AEQHAVTF+AG+A  GLKPFC I S+FLQR YDQV
Sbjct: 426 AAMGGGTGLNIFQKQFPDRCFDVGIAEQHAVTFAAGMAAEGLKPFCAIYSSFLQRGYDQV 485

Query: 486 VNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVAT 545
           V+DVD Q+LPVRF++  AG+VG+DGPT CGAFD T+M+CLPNM+VMAPSDE EL++M+AT
Sbjct: 486 VHDVDLQKLPVRFMMDRAGVVGADGPTHCGAFDTTYMACLPNMVVMAPSDEAELMNMIAT 545

Query: 546 VASIDDRPVCFRYPRGAIVRTDLP-GYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLK 604
            A IDDRP C RYPRG  +   LP   +G P+EIGKG++L EG  VA+LG+G +VQNC+ 
Sbjct: 546 AAIIDDRPSCVRYPRGNGIGVALPSNNKGTPLEIGKGRILKEGSKVAILGFGTIVQNCMA 605

Query: 605 ARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALD 664
           A  LL + GI VTVADARFCKPLD  L+++L Q H  LITVEEGSIGGF +H+SHF++L+
Sbjct: 606 AANLLEQHGISVTVADARFCKPLDGDLIKKLVQEHEVLITVEEGSIGGFSAHISHFLSLN 665

Query: 665 GLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLLM 720
           GLLD  +KWRP+VLPD YI+H + + Q+  AGL+  HIA T +SL+G  +++L L+
Sbjct: 666 GLLDGNLKWRPMVLPDRYIDHGAQSDQIEEAGLSPKHIAGTVVSLIGGGKDSLHLI 721


>gi|145652154|gb|ABP88135.1| 1-deoxy-D-xylulose 5-phosphate synthase [Zea mays]
          Length = 705

 Score =  745 bits (1923), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/657 (57%), Positives = 476/657 (72%), Gaps = 11/657 (1%)

Query: 71  DFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVEL 130
           DF  +K PTP+LD V  PL +K+L+I EL+QLA E+R+E+   VSKT   L SSL  VEL
Sbjct: 51  DFSGEKPPTPLLDTVNYPLHMKNLSILELEQLAAELRAEVVHTVSKTGGHLSSSLGVVEL 110

Query: 131 TVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFN 190
           +VALHHVF  P DKI+WDVG Q Y HKILTGRRS +HT+R+  G++G+  R ES +D F 
Sbjct: 111 SVALHHVFDTPEDKIIWDVGHQAYPHKILTGRRSRMHTIRQTSGLAGFPKRDESAHDAFG 170

Query: 191 AGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
            GH   S+SA LGMAVARD+ G++  +++VI +G   AGQAYEAM+N+GYLD+NMIV+LN
Sbjct: 171 VGHSSTSISAALGMAVARDLLGRKNHVISVIGDGAMTAGQAYEAMNNSGYLDANMIVVLN 230

Query: 251 DSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKV 309
           D++  SL     + P   + ALS  L+++QSS  FR+LRE AK +TK+IG   HE AAKV
Sbjct: 231 DNKQVSLPTATLDGPSKPVGALSRALTKLQSSTKFRRLREAAKSVTKQIGGPTHEVAAKV 290

Query: 310 DEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN 369
           DEYARGMI   GS+LFEELGLYYIGPVDGH +EDL+++ ++V S+ + GPVL+H+VTE+ 
Sbjct: 291 DEYARGMISASGSSLFEELGLYYIGPVDGHCVEDLVTIFEKVKSMPAPGPVLIHIVTEKG 350

Query: 370 RRAEDTQKSEAIEKQQEGA-----SDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVV 424
           +       +EA   +  G      +    L   + + +Y   F E+L+ EAE D+ +V +
Sbjct: 351 K---GYPPAEAAADRMHGVVKFEPATGRQLKSKSPTLSYTQYFAESLIREAESDEKVVAI 407

Query: 425 HAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQ 484
           HA M     L  FQ++FPER FDVG+AEQHAVTF+AGLA  GLKPFC I S+FLQR YDQ
Sbjct: 408 HAAMGGGTGLNYFQKRFPERCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRGYDQ 467

Query: 485 VVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVA 544
           VV+DVD QRLPVRF +  AGLVG+DGPT CGAFD+ +M+CLPNM+VMAP+DE EL+ MVA
Sbjct: 468 VVHDVDLQRLPVRFALDRAGLVGADGPTHCGAFDVAYMACLPNMVVMAPADEAELMHMVA 527

Query: 545 TVASIDDRPVCFRYPRGAIVRTDL-PGYRGIPIEIGKGKVLVEGKD-VALLGYGAMVQNC 602
           T A+IDDRP CFR+PRG  V   L PG +G+ +E+G+G+VLV G   VALLGYGAMVQ C
Sbjct: 528 TAAAIDDRPSCFRFPRGNGVGAALPPGNKGVALEVGRGRVLVGGGTRVALLGYGAMVQAC 587

Query: 603 LKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIA 662
           LKA   L +  + VTVADARFCKPLD  L+REL   H  LIT EEGSIGGFGSHV+H+++
Sbjct: 588 LKAAEALKEHDVYVTVADARFCKPLDTALIRELAAEHEVLITAEEGSIGGFGSHVAHYLS 647

Query: 663 LDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLL 719
           L GLLD  +K R + LPD YI+H +P  Q+  AGLT  HIAAT LSLLGR  EA+ L
Sbjct: 648 LTGLLDGPLKLRSMFLPDRYIDHGAPQDQIEEAGLTPRHIAATVLSLLGRPLEAMQL 704


>gi|145334377|ref|NP_001078570.1| 1-deoxy-D-xylulose 5-phosphate synthase 3 [Arabidopsis thaliana]
 gi|110742752|dbj|BAE99284.1| 1-D-deoxyxylulose 5-phosphate synthase - like protein [Arabidopsis
           thaliana]
 gi|332004287|gb|AED91670.1| 1-deoxy-D-xylulose 5-phosphate synthase 3 [Arabidopsis thaliana]
          Length = 565

 Score =  744 bits (1922), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/573 (65%), Positives = 449/573 (78%), Gaps = 21/573 (3%)

Query: 5   SAKYPLELPLTAHCHGTLDQRKIEFLSSNISRELEISRINLCPSSSSITSSKLVTVSRIC 64
           SA    +  ++A  +G  +    +   S++  +L++S  +L  + SS T  +    +R+C
Sbjct: 3   SASIGYQFGISARFYGNFNLSS-DITVSSLPCKLDVSIKSLFSAPSS-THKEYSNRARVC 60

Query: 65  ALPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIV-SKTEKSLKS 123
           +LP+ D +  +K  TPILD +E PL+LK+L++KELK LA EIR+EL S++  KT+KS+  
Sbjct: 61  SLPNTDGYCDEKFETPILDSIETPLQLKNLSVKELKLLADEIRTELHSVLWKKTQKSMNP 120

Query: 124 SLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSE 183
           S AA+ELT+ALH+VF APVD ILWD  EQTYAHK+LT R S I + R+  GISG TSR E
Sbjct: 121 SFAAIELTLALHYVFRAPVDNILWDAVEQTYAHKVLTRRWSAIPS-RQNSGISGVTSRLE 179

Query: 184 SEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDS 243
           SEYD F  GHGCNS+SAGLG+AVARD+KGKR+ +V VI N T  AGQAYEAMSNAGYLDS
Sbjct: 180 SEYDSFGTGHGCNSISAGLGLAVARDMKGKRDRVVAVIDNVTITAGQAYEAMSNAGYLDS 239

Query: 244 NMIVILNDSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMH 303
           NMIVILNDSRHSLHP +EE  K SI+ALSS +S+IQSSK FR+ RE+AK MTKRIG+GM+
Sbjct: 240 NMIVILNDSRHSLHPNMEEGSKASISALSSIMSKIQSSKVFRKFRELAKAMTKRIGKGMY 299

Query: 304 EWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVH 363
           EWAAKVDEYARGM+GP GSTLFEELGLYYIGPVDGHNIEDL+ VL+EV+SL SMGPVLVH
Sbjct: 300 EWAAKVDEYARGMVGPTGSTLFEELGLYYIGPVDGHNIEDLVCVLREVSSLDSMGPVLVH 359

Query: 364 VVTEENRRAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVV 423
           V+TE NR AE T K+  ++ +                RTY DCF+EALVMEAEKD+DIVV
Sbjct: 360 VITEGNRDAE-TVKNIMVKDR----------------RTYSDCFVEALVMEAEKDRDIVV 402

Query: 424 VHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYD 483
           VHAGMEMD SL  FQE+FP+R+F+VGMAEQHAVTFSAGL+ GGLKPFCIIPSAFLQRAYD
Sbjct: 403 VHAGMEMDPSLLTFQERFPDRFFNVGMAEQHAVTFSAGLSSGGLKPFCIIPSAFLQRAYD 462

Query: 484 QVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMV 543
           QVV+DVD+QR  VRFVITSAGLVGSDGP QCGAFDI FMS LPNMI MAP+DEDELV+MV
Sbjct: 463 QVVHDVDRQRKAVRFVITSAGLVGSDGPVQCGAFDIAFMSSLPNMIAMAPADEDELVNMV 522

Query: 544 ATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPI 576
           AT A + DRPVCFR+PRG+IV  +     G+PI
Sbjct: 523 ATAAYVTDRPVCFRFPRGSIVNMNYLVPTGLPI 555


>gi|56785668|gb|AAW28999.1| 1-deoxy-D-xylulose-5-phosphate synthase [Antirrhinum majus]
          Length = 733

 Score =  742 bits (1916), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/661 (54%), Positives = 473/661 (71%), Gaps = 18/661 (2%)

Query: 71  DFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVEL 130
           +F  +K  TPILD +  P+ +K+L+++EL+ LA E+R EL   VSKT   L SSL   EL
Sbjct: 78  NFTGEKPSTPILDTINYPIHMKNLSLEELEILADELREELVYSVSKTGGHLSSSLGVAEL 137

Query: 131 TVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFN 190
           TVALHHVF  P DKI+WDVG Q Y HKILTGRRS +HT+RK  G++G+  R ES +D F 
Sbjct: 138 TVALHHVFSTPEDKIIWDVGHQAYPHKILTGRRSKMHTMRKTFGLAGFPKREESVHDAFG 197

Query: 191 AGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
           AGH   S+SAGLGMAVARD+ G    +++VI +G   AGQAYEAM+NAGYLDSN+I+ILN
Sbjct: 198 AGHSSTSISAGLGMAVARDLLGNNNHVISVIGDGAMTAGQAYEAMNNAGYLDSNLIIILN 257

Query: 251 DSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKV 309
           D++  SL     + P   + AL+  L+R+Q+S+ FRQLREVAK +TK+IG   HE AAKV
Sbjct: 258 DNKQVSLPTATVDGPAPPVGALTKALTRLQTSRKFRQLREVAKELTKQIGTEAHEVAAKV 317

Query: 310 DEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN 369
           D + RG+ G  G+ LFEELG+YYIGPVDGH+IEDL+ + +++  + + GPV++H++TE+ 
Sbjct: 318 DSFVRGVAGSPGACLFEELGIYYIGPVDGHSIEDLVFIFKKIKEMPAPGPVMIHIITEKG 377

Query: 370 RRAEDTQ----KSEAIEK-----QQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKD 420
           +     +    K   + K      Q+  S S +L +  Y       F E+L+ EAE+D  
Sbjct: 378 KGYPPAEVAADKMHGVVKFDPRTGQQKKSKSETLSYTQY-------FAESLIAEAEQDDK 430

Query: 421 IVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQR 480
           +V +HA M     L +FQ++FP R FDVG+AEQHAVTF+AGLA  GLKPFC I S+FLQR
Sbjct: 431 VVAIHAAMGGGTGLNIFQKRFPGRTFDVGIAEQHAVTFAAGLATEGLKPFCAIYSSFLQR 490

Query: 481 AYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELV 540
            YDQV +DVD Q+LPVRF++  AGLVG+DGPT CGAFD T+M+CLPNM+VMAPSDE EL+
Sbjct: 491 GYDQVAHDVDLQKLPVRFIMDRAGLVGADGPTHCGAFDTTYMACLPNMVVMAPSDEAELM 550

Query: 541 DMVATVASIDDRPVCFRYPRGAIVRTDL-PGYRGIPIEIGKGKVLVEGKDVALLGYGAMV 599
            M+AT A IDDRP C RYPRG  +   L P  +G P+EIGKG++L EG  VA+LG+G ++
Sbjct: 551 HMIATAAIIDDRPSCLRYPRGNGIGAVLPPNNKGTPMEIGKGRILREGSRVAILGFGTII 610

Query: 600 QNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSH 659
           QNCL A  LL +  + +TVADARFCKPLD  L+R+L + H  LIT+EEGSIGGF SHVSH
Sbjct: 611 QNCLAAADLLQEHRVSITVADARFCKPLDGDLIRQLVKEHEVLITIEEGSIGGFSSHVSH 670

Query: 660 FIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLL 719
           F+ L+GLLD  +KWR +VLPD YI+H + + Q+  AGL+  HIAAT LSL+G  +++L L
Sbjct: 671 FLCLNGLLDGNLKWRAMVLPDRYIDHGAQSDQIEEAGLSPRHIAATVLSLIGEGKDSLHL 730

Query: 720 M 720
           M
Sbjct: 731 M 731


>gi|225446107|ref|XP_002270336.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic-like [Vitis vinifera]
          Length = 731

 Score =  741 bits (1914), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/654 (55%), Positives = 468/654 (71%), Gaps = 10/654 (1%)

Query: 71  DFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVEL 130
           +F  +K  T ILD + +P  +K+L+I+EL+ LA E+R EL  +VSKT   L +SL   EL
Sbjct: 75  NFSGEKPSTSILDTINHPKHMKNLSIEELEMLADELREELVYVVSKTGGHLSASLGVAEL 134

Query: 131 TVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFN 190
           TVALHHVF+ P DKI+WDVG Q Y HKILT RRS +HT+R+  G++G+  R ES +D F 
Sbjct: 135 TVALHHVFNTPDDKIIWDVGHQAYPHKILTARRSRMHTIRQTSGLAGFPKRDESVHDAFG 194

Query: 191 AGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
           AGH   S+SAGLGMAVARD+  K   ++ VI +G   AGQAYEAM+NAGYLDSN+I+ILN
Sbjct: 195 AGHSSTSISAGLGMAVARDLLRKNNHVIAVIGDGAMTAGQAYEAMNNAGYLDSNLIIILN 254

Query: 251 DSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKV 309
           D+   SL     + P   + ALS  L R+QSS+ F+QL + AK +T+R+G   HE AAKV
Sbjct: 255 DNNQVSLPTATADGPAPPVGALSKALKRLQSSRKFQQLHQTAKAITERVGGQAHEIAAKV 314

Query: 310 DEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN 369
           D Y RGMI   G+  FEELGL+YIGPVDGHN+E+L+ +L+ V ++   G VL+H+VTE  
Sbjct: 315 DLYLRGMINGLGACFFEELGLHYIGPVDGHNMEELVHILKVVKAIPGQGAVLIHIVTE-- 372

Query: 370 RRAEDTQKSEAIEKQQEGA-----SDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVV 424
            + +    +EA   +  G           L   + + +Y   F E+L+ EAE+D  IV +
Sbjct: 373 -KGKGYAPAEAAPDKMHGVVKFDPHSGKQLKSKSSTLSYTQYFAESLIAEAERDDKIVAI 431

Query: 425 HAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQ 484
           HA M     L LFQ++FP R FDVG+AEQHAVTF+AGLA  GLKPFC I S+FLQRA+DQ
Sbjct: 432 HAAMGGGTGLNLFQKRFPNRCFDVGIAEQHAVTFAAGLATEGLKPFCAIYSSFLQRAFDQ 491

Query: 485 VVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVA 544
           VV+DVD Q+LPVRF +  AGLVG+DGPT CGAFD TFM+CLPNM+VMAPS E EL++MVA
Sbjct: 492 VVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDTTFMACLPNMVVMAPSCERELMNMVA 551

Query: 545 TVASIDDRPVCFRYPRGAIVRTDLPGY-RGIPIEIGKGKVLVEGKDVALLGYGAMVQNCL 603
           T A+IDDRP CFRYPRG  + + +P + +G P+E+GKG+VL EG  VA+LGYG +VQ+C+
Sbjct: 552 TAAAIDDRPSCFRYPRGNGIGSIIPPFNKGTPLEVGKGRVLEEGTRVAILGYGTIVQSCV 611

Query: 604 KARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIAL 663
            A  LL + GI  TV DARFCKPLD  L+R+L + H  L+TVEEGSIGGFGSHVSHF+AL
Sbjct: 612 AASHLLQRFGISATVVDARFCKPLDGDLIRQLAREHEVLLTVEEGSIGGFGSHVSHFLAL 671

Query: 664 DGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREAL 717
           +GLLD  +KWR ++LPD YI+H S  +Q+  AGLT  HIAAT L+L+G  ++AL
Sbjct: 672 NGLLDGTLKWRAMMLPDRYIDHGSQREQIEEAGLTSKHIAATVLALIGENKDAL 725


>gi|297735368|emb|CBI17808.3| unnamed protein product [Vitis vinifera]
          Length = 808

 Score =  741 bits (1913), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/654 (55%), Positives = 468/654 (71%), Gaps = 10/654 (1%)

Query: 71  DFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVEL 130
           +F  +K  T ILD + +P  +K+L+I+EL+ LA E+R EL  +VSKT   L +SL   EL
Sbjct: 152 NFSGEKPSTSILDTINHPKHMKNLSIEELEMLADELREELVYVVSKTGGHLSASLGVAEL 211

Query: 131 TVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFN 190
           TVALHHVF+ P DKI+WDVG Q Y HKILT RRS +HT+R+  G++G+  R ES +D F 
Sbjct: 212 TVALHHVFNTPDDKIIWDVGHQAYPHKILTARRSRMHTIRQTSGLAGFPKRDESVHDAFG 271

Query: 191 AGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
           AGH   S+SAGLGMAVARD+  K   ++ VI +G   AGQAYEAM+NAGYLDSN+I+ILN
Sbjct: 272 AGHSSTSISAGLGMAVARDLLRKNNHVIAVIGDGAMTAGQAYEAMNNAGYLDSNLIIILN 331

Query: 251 DSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKV 309
           D+   SL     + P   + ALS  L R+QSS+ F+QL + AK +T+R+G   HE AAKV
Sbjct: 332 DNNQVSLPTATADGPAPPVGALSKALKRLQSSRKFQQLHQTAKAITERVGGQAHEIAAKV 391

Query: 310 DEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN 369
           D Y RGMI   G+  FEELGL+YIGPVDGHN+E+L+ +L+ V ++   G VL+H+VTE  
Sbjct: 392 DLYLRGMINGLGACFFEELGLHYIGPVDGHNMEELVHILKVVKAIPGQGAVLIHIVTE-- 449

Query: 370 RRAEDTQKSEAIEKQQEGA-----SDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVV 424
            + +    +EA   +  G           L   + + +Y   F E+L+ EAE+D  IV +
Sbjct: 450 -KGKGYAPAEAAPDKMHGVVKFDPHSGKQLKSKSSTLSYTQYFAESLIAEAERDDKIVAI 508

Query: 425 HAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQ 484
           HA M     L LFQ++FP R FDVG+AEQHAVTF+AGLA  GLKPFC I S+FLQRA+DQ
Sbjct: 509 HAAMGGGTGLNLFQKRFPNRCFDVGIAEQHAVTFAAGLATEGLKPFCAIYSSFLQRAFDQ 568

Query: 485 VVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVA 544
           VV+DVD Q+LPVRF +  AGLVG+DGPT CGAFD TFM+CLPNM+VMAPS E EL++MVA
Sbjct: 569 VVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDTTFMACLPNMVVMAPSCERELMNMVA 628

Query: 545 TVASIDDRPVCFRYPRGAIVRTDLPGY-RGIPIEIGKGKVLVEGKDVALLGYGAMVQNCL 603
           T A+IDDRP CFRYPRG  + + +P + +G P+E+GKG+VL EG  VA+LGYG +VQ+C+
Sbjct: 629 TAAAIDDRPSCFRYPRGNGIGSIIPPFNKGTPLEVGKGRVLEEGTRVAILGYGTIVQSCV 688

Query: 604 KARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIAL 663
            A  LL + GI  TV DARFCKPLD  L+R+L + H  L+TVEEGSIGGFGSHVSHF+AL
Sbjct: 689 AASHLLQRFGISATVVDARFCKPLDGDLIRQLAREHEVLLTVEEGSIGGFGSHVSHFLAL 748

Query: 664 DGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREAL 717
           +GLLD  +KWR ++LPD YI+H S  +Q+  AGLT  HIAAT L+L+G  ++AL
Sbjct: 749 NGLLDGTLKWRAMMLPDRYIDHGSQREQIEEAGLTSKHIAATVLALIGENKDAL 802


>gi|449532138|ref|XP_004173040.1| PREDICTED: LOW QUALITY PROTEIN: probable
           1-deoxy-D-xylulose-5-phosphate synthase 2,
           chloroplastic-like, partial [Cucumis sativus]
          Length = 694

 Score =  739 bits (1908), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/640 (56%), Positives = 468/640 (73%), Gaps = 11/640 (1%)

Query: 71  DFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVEL 130
           D+  +K  TP+LD V  P+ +K+L++++L++LA E+R+E+   VSKT   L +SL  VEL
Sbjct: 58  DYSGEKPATPLLDTVNFPIHMKNLSMQDLEKLAAELRAEIVFSVSKTGGHLSASLGVVEL 117

Query: 131 TVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFN 190
            VALHHVF+ P DKI+WDVG Q Y HKILTGRRS +HTLR+  G++G+  R ES +D F 
Sbjct: 118 AVALHHVFNTPDDKIIWDVGHQAYPHKILTGRRSRMHTLRQTSGLAGFPKRDESIHDAFG 177

Query: 191 AGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
           AGH   S+SAGLGMAV RD+ GK+  +++VI +G   AGQAYEAM+NAGYLD+NMIVILN
Sbjct: 178 AGHSSTSISAGLGMAVGRDLLGKKNSVISVIGDGAMTAGQAYEAMNNAGYLDTNMIVILN 237

Query: 251 DSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKV 309
           D++  SL     + P T + ALSS L+++Q+S  FR+LRE AK +TK+IG+  H  AAKV
Sbjct: 238 DNKQVSLPTATLDGPATPVGALSSALTKLQASTQFRKLREAAKTITKQIGKQTHGVAAKV 297

Query: 310 DEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN 369
           DEYARGMI   GST FEELGLYYIGPVDGHN+ DL+++L++V S+ + GPVL+H++TE  
Sbjct: 298 DEYARGMISGSGSTFFEELGLYYIGPVDGHNVGDLVTILEKVKSMPAPGPVLIHILTE-- 355

Query: 370 RRAEDTQKSEAIEKQQEGA---SDSNSLPFGNYSRT--YDDCFIEALVMEAEKDKDIVVV 424
            + +    +EA   +  G           F   S T  Y   F E+L+ EAE D  IV +
Sbjct: 356 -KGKGYPPAEAAADKMHGVVKFDPKTGKQFKTKSPTLSYTQYFAESLIKEAELDDKIVAI 414

Query: 425 HAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQ 484
           HA M     L  FQ+KFP+R FDVG+AEQHAVTF+AGLA  G+KPFC I S+FLQR +DQ
Sbjct: 415 HAAMGGGTGLNYFQKKFPQRCFDVGIAEQHAVTFAAGLATEGIKPFCAIYSSFLQRGFDQ 474

Query: 485 VVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVA 544
           VV+DVD Q+LPVRF +  AGLVG+DGPT CGAFDIT+M+CLPNMIVMAP+DE EL+ MVA
Sbjct: 475 VVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITYMACLPNMIVMAPADEAELIHMVA 534

Query: 545 TVASIDDRPVCFRYPRGAIVRTDL-PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCL 603
           T A IDDRP CFR+PRG  +   + P ++G PIEIGKG++++EG  VA+LGYG++VQ C+
Sbjct: 535 TAAEIDDRPSCFRFPRGNGIGVVVPPNFKGTPIEIGKGRIVMEGTRVAILGYGSIVQQCV 594

Query: 604 KARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIAL 663
           +A  LL   GI  TVADARFCKPLD +L+R+L + H  LITVEEGSIGGFGSHVS+F+++
Sbjct: 595 EASELLKTRGITPTVADARFCKPLDTQLIRQLAKEHEILITVEEGSIGGFGSHVSYFLSV 654

Query: 664 DGLLDS-GVKWRPIVLPDNYIEHASPTQQLALAGLTGHHI 702
            G+LD   +K R +VLPD YI+H SP  Q+  AGL+  HI
Sbjct: 655 TGILDQHHLKLRSMVLPDRYIDHGSPGDQMEEAGLSSEHI 694


>gi|449457233|ref|XP_004146353.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase 2,
           chloroplastic-like [Cucumis sativus]
          Length = 721

 Score =  739 bits (1907), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 360/656 (54%), Positives = 468/656 (71%), Gaps = 10/656 (1%)

Query: 72  FFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELT 131
           F  DK  TPILD +  P+ +K+L+I+EL++L+ EIR E+   VSKT   L SSL   ELT
Sbjct: 67  FTGDKPSTPILDTINYPIHMKNLSIEELQELSNEIREEIVYTVSKTGGHLSSSLGVAELT 126

Query: 132 VALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNA 191
           VALHHVF  P DKI+WDVG Q YAHK+LTGRR  +HT+R+  G++G+  R ES +D F  
Sbjct: 127 VALHHVFATPEDKIIWDVGHQAYAHKMLTGRRGRMHTIRQTFGLAGFPKREESVHDAFGV 186

Query: 192 GHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILND 251
           GH   S+SAGLGMAV RDI GK   +V+VI +G    G AYEA++NAGYLDSN+IVILND
Sbjct: 187 GHSSTSISAGLGMAVGRDILGKNNHVVSVIGDGAMTGGMAYEALNNAGYLDSNLIVILND 246

Query: 252 SRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVD 310
           +R  SL     + P T + AL+  L+++Q+SK  RQLRE AK ++K++G   H  AAKV+
Sbjct: 247 NRQVSLPTATIDGPATPVGALNKALTKLQASKKLRQLREAAKAVSKQMGGETHGIAAKVE 306

Query: 311 EYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR 370
              RGM+G  G++LFEELG+YYIGPVDGHN+EDL+ +L++V ++ + GPVL+HV+TE   
Sbjct: 307 HCVRGMVGGTGASLFEELGIYYIGPVDGHNVEDLVYILKQVKAMPASGPVLIHVITE--- 363

Query: 371 RAEDTQKSEAIEKQQEGASD-----SNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVH 425
           + +    +E    +  G  +        +     + +Y   F ++L+ EAE+D  IV +H
Sbjct: 364 KGKGYPPAEIAADKMHGVVNFDPKSGKQMKKKTETLSYTQYFADSLIAEAERDDKIVAIH 423

Query: 426 AGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQV 485
           A M     L  FQ++FP R FDVG+AEQHAVTF+AGLA  GLKPFC I S+FLQRAYDQV
Sbjct: 424 AAMGGGTGLNYFQKQFPNRCFDVGIAEQHAVTFAAGLATEGLKPFCAIYSSFLQRAYDQV 483

Query: 486 VNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVAT 545
            +DVD Q+LPVRF I  AGLVG+DGPT CGAFD TFM+CLPNM+VMAPS+E EL++MVAT
Sbjct: 484 AHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVMAPSNEAELMNMVAT 543

Query: 546 VASIDDRPVCFRYPRGAIVRTDLP-GYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLK 604
            A+IDDRP CFRYPRG  +   LP   +G P+E+GKG++L EG  VA+LGYG +VQ+CL 
Sbjct: 544 AAAIDDRPSCFRYPRGNGIGCVLPLNNKGTPLEVGKGRILREGNRVAILGYGTIVQSCLA 603

Query: 605 ARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALD 664
           A  +L + GI +TVADARFCKPLD +LV++L + H  L+TVEEGSIGGF SHVSHF+ L+
Sbjct: 604 AANVLQEYGIQITVADARFCKPLDGELVKQLARQHEILLTVEEGSIGGFSSHVSHFLGLN 663

Query: 665 GLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLLM 720
           GLLD  +KWR +VLPD YI+H S   Q   AGL+   IAAT LSL+G+ ++   L+
Sbjct: 664 GLLDGNLKWRALVLPDRYIDHGSQKDQTQEAGLSWKDIAATVLSLIGKGKDCFQLV 719


>gi|2612941|gb|AAB88295.1| CLA1 transketolase-like protein [Oryza sativa]
          Length = 594

 Score =  736 bits (1900), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/599 (60%), Positives = 448/599 (74%), Gaps = 18/599 (3%)

Query: 88  PLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDKILW 147
           P+ +K+L++KEL+QLA E+RS++   VSKT   L SSL  VELTVALH+VF+ P DKILW
Sbjct: 3   PIHMKNLSLKELQQLADELRSDVIFHVSKTGGHLGSSLGVVELTVALHYVFNTPQDKILW 62

Query: 148 DVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVA 207
           DVG Q+Y HKILTGRR  + T+R+ +G+SG+T RSESEYD F  GH   ++SA LGMAV 
Sbjct: 63  DVGHQSYPHKILTGRRDKMPTMRQTNGLSGFTKRSESEYDSFGTGHSSTTISAALGMAVG 122

Query: 208 RDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH-SLHPKIEESPKT 266
           RD+KG +  +V VI +G   AGQAYEAM+NAGYLDS+MIVILND++  SL     + P  
Sbjct: 123 RDLKGGKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPAP 182

Query: 267 SINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFE 326
            + ALSS LS++QSS+  R+LREVAKG+TK+IG  +HE AAKVDEYARGMI   GSTLFE
Sbjct: 183 PVGALSSALSKLQSSRPLRELREVAKGVTKQIGGSVHELAAKVDEYARGMISGSGSTLFE 242

Query: 327 ELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR------RAEDTQKSEA 380
           ELGLYYIGPVDGHNI+DLI++L+EV S  + GPVL+HVVTE+ R      RA D     A
Sbjct: 243 ELGLYYIGPVDGHNIDDLITILREVKSTKTTGPVLIHVVTEKGRGYPYAERAADKYHGVA 302

Query: 381 IEKQQEGA---SDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLF 437
                 G    S + +L + NY       F EAL+ EAE+D  +V +HA M     L  F
Sbjct: 303 KFDPATGKQFKSPAKTLSYTNY-------FAEALIAEAEQDNRVVAIHAAMGGGTGLNYF 355

Query: 438 QEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVR 497
             +FP R FDVG+AEQHAVTF+AGLAC GLKPFC I S+FLQR YDQVV+DVD Q+LPVR
Sbjct: 356 LRRFPNRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVR 415

Query: 498 FVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFR 557
           F +  AGLVG+DGPT CGAFD+T+M+CLPNM+VMAPSDE EL  MVAT A+IDDRP CFR
Sbjct: 416 FAMDRAGLVGADGPTHCGAFDVTYMACLPNMVVMAPSDEAELCHMVATAAAIDDRPSCFR 475

Query: 558 YPRGAIVRTDL-PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDV 616
           YPRG  +   L P Y+G+P+E+GKG+VL+EG+ VALLGYG+ VQ CL A +L+ + G+ V
Sbjct: 476 YPRGNGIGVPLPPNYKGVPLEVGKGRVLLEGERVALLGYGSAVQYCLAAASLVERHGLKV 535

Query: 617 TVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWRP 675
           TVADARFCKPLD  L+R L  +H  L+TVEEGSIGGFGSHV+ F+ALDGLLD  +KWRP
Sbjct: 536 TVADARFCKPLDQTLIRRLASSHEVLLTVEEGSIGGFGSHVAQFMALDGLLDGKLKWRP 594


>gi|297835124|ref|XP_002885444.1| 1-deoxyxylulose-5-phosphate synthase [Arabidopsis lyrata subsp.
           lyrata]
 gi|297331284|gb|EFH61703.1| 1-deoxyxylulose-5-phosphate synthase [Arabidopsis lyrata subsp.
           lyrata]
          Length = 655

 Score =  735 bits (1898), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/681 (54%), Positives = 471/681 (69%), Gaps = 50/681 (7%)

Query: 43  INLC-PSSSSITSSKLVTVSRICALPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQ 101
           I  C P+S S T +  V  +    + +  +++  + PTP+LD + +P+ +K+L+IKELK 
Sbjct: 18  IKYCKPTSMSSTKTSKVRAT----IAEKGEYYSSRPPTPLLDTINHPMHMKNLSIKELKV 73

Query: 102 LAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTG 161
           L+ E+RS++   VSKT   L S+L  VELTVALH++F+ P DKILWDVG Q+Y HKILTG
Sbjct: 74  LSDELRSDVIFNVSKTGGHLGSNLGVVELTVALHYIFNTPQDKILWDVGHQSYPHKILTG 133

Query: 162 RRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVI 221
           RR  + T+R+ +G+SGYT+R ESE+D F  GH   ++SAGLGMAV RD+KG    +V VI
Sbjct: 134 RRGKMKTIRQTNGLSGYTNRRESEHDSFGTGHSSTTISAGLGMAVGRDLKGMNNSVVAVI 193

Query: 222 SNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKIE-ESPKTSINALSSTLSRIQS 280
            +G   AGQAYEAM+NAGYLDS+MIVILND++    P    + P   + ALS  LS    
Sbjct: 194 GDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTANLDGPTPPVGALSCALSS--- 250

Query: 281 SKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHN 340
                                                   GSTLFEELG +Y+GPVDGHN
Sbjct: 251 --------------------------------------GTGSTLFEELGFHYVGPVDGHN 272

Query: 341 IEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSEAIEKQQEGASDSNSLPFGNYS 400
           I+DL+S+L++V S   +GPVL+HVVTE+ R     ++++           +    F N S
Sbjct: 273 IDDLVSILEKVKSTKPIGPVLIHVVTEKGRGYPYAERADDKYHGVLKFDPATGKQFKNIS 332

Query: 401 RT--YDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTF 458
           +T  Y  CF+EAL  EAE DK+IV +HA M     L LF+ +FP R FDVG+AEQHAVTF
Sbjct: 333 KTQSYTSCFVEALTAEAEADKNIVAIHAAMGGGTMLNLFESRFPTRCFDVGIAEQHAVTF 392

Query: 459 SAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFD 518
           +AGLAC GLKPFC I S+F+QRAYDQVV+DVD Q+LPVRF I  AGL+G+DGPT CGAFD
Sbjct: 393 AAGLACEGLKPFCTIYSSFMQRAYDQVVHDVDLQKLPVRFAIDRAGLMGADGPTHCGAFD 452

Query: 519 ITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYPRGAIVRTDL-PGYRGIPIE 577
           +TFM+CLPNMIVMAPSDE EL +MVAT A+IDDRP CFRY RG  +   L PG +G+P++
Sbjct: 453 VTFMACLPNMIVMAPSDEAELFNMVATAAAIDDRPSCFRYHRGNGIGVSLPPGNKGVPLQ 512

Query: 578 IGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQ 637
           IGKG++L EG+ VALLGYG+ VQ CL+A ++LS+ G+ +TVADARFCKPLD+ L+R L +
Sbjct: 513 IGKGRILREGERVALLGYGSAVQRCLEAASMLSERGLKITVADARFCKPLDVALIRSLVK 572

Query: 638 NHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGL 697
           +H  LITVEEGSIGGFGSHV  F+ALDGLLD  +KWRP+VLPD YIEH SP  QLA AGL
Sbjct: 573 SHEVLITVEEGSIGGFGSHVVQFLALDGLLDGKLKWRPMVLPDRYIEHGSPMDQLAEAGL 632

Query: 698 TGHHIAATALSLLGRTREALL 718
           T  HIAATAL+L+G  REAL 
Sbjct: 633 TASHIAATALNLMGTPREALF 653


>gi|357517205|ref|XP_003628891.1| 1-Deoxy-D-xylulose 5-phosphate synthase [Medicago truncatula]
 gi|355522913|gb|AET03367.1| 1-Deoxy-D-xylulose 5-phosphate synthase [Medicago truncatula]
          Length = 736

 Score =  734 bits (1895), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/687 (53%), Positives = 473/687 (68%), Gaps = 46/687 (6%)

Query: 71  DFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVEL 130
           +F  +K PTP+LD V  P+ +K+LT ++L+QLA E+R+++   VS T   L SSL  VEL
Sbjct: 58  NFSAEKPPTPLLDTVNFPVHMKNLTTEDLEQLAAELRADIVHSVSDTGGHLSSSLGVVEL 117

Query: 131 TVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFN 190
           +VALHHVF  P DKI+WDVG Q Y HKILTGRRS +HT+RK  G++G+  R ES +D F 
Sbjct: 118 SVALHHVFDTPDDKIIWDVGHQAYPHKILTGRRSRMHTIRKTSGLAGFPKRDESVHDAFG 177

Query: 191 AGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
            GH   S+SAGLGMA+ARD+ GK+  +++VI +G   AGQAYEA++NAG+LDSN+IVILN
Sbjct: 178 VGHSSTSISAGLGMAIARDLLGKKNSVISVIGDGAMTAGQAYEALNNAGFLDSNLIVILN 237

Query: 251 DSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAK----------------- 292
           D++  SL     + P T + ALSSTLS+IQ+S+ FR+LRE  K                 
Sbjct: 238 DNKQVSLPTATLDGPATPVGALSSTLSKIQASRKFRKLREATKVSPFRPLYYSKTSIPFW 297

Query: 293 ---------GMTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIED 343
                     +TK+IG   H  A+KVD+YAR  I   GS+LFEELG+YYIGP+DGHNIED
Sbjct: 298 NLTLIYLLQNITKQIGGQTHLVASKVDKYARDFISGSGSSLFEELGMYYIGPMDGHNIED 357

Query: 344 LISVLQEVASLGSMGPVLVHVVTEENR----------RAEDTQKSEAIEKQQEGASDSNS 393
           L+++ ++V +  + GPVL+H+VTE+ +          R     K +     Q     S  
Sbjct: 358 LVNIFEKVKATPASGPVLIHIVTEKGKGYPPAVAAADRMHGVVKFDPKTGHQFKPKPS-- 415

Query: 394 LPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQ 453
                 +  Y   F ++L+ EAE D  IV +HA M     L  FQ++FP+R FDVG+AEQ
Sbjct: 416 ------TLAYTQYFADSLIKEAEMDNKIVAIHAAMGGGTGLNYFQKRFPDRCFDVGIAEQ 469

Query: 454 HAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQ 513
           HAVTF+AGLA  GLKPFC I S FLQR YDQVV+DVD Q+LPVRF +  AGLVG+DGPT 
Sbjct: 470 HAVTFAAGLATEGLKPFCAIYSTFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTH 529

Query: 514 CGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYPRGAIVRTDLPGY-R 572
           CGAFDITFM+CLPNMIVMAPSDE EL++MVAT A+IDDRP CFR+PRG  +  DLP + +
Sbjct: 530 CGAFDITFMACLPNMIVMAPSDEAELMNMVATAAAIDDRPSCFRFPRGNGIGADLPLHNK 589

Query: 573 GIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLV 632
           G P+EIGKG++L+EG  VA+LGYG MVQ C+KA  +L  +G+ VTV+DARFCKPLD  L+
Sbjct: 590 GTPLEIGKGRILLEGSRVAILGYGCMVQQCMKAAEMLRAVGVYVTVSDARFCKPLDTDLI 649

Query: 633 RELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQL 692
           R L + H  LITVEEGSIGGFGSHVS F++L GLLD  +K R ++LPD YI+H +P  Q+
Sbjct: 650 RLLAREHEILITVEEGSIGGFGSHVSQFLSLAGLLDGPLKLRSMMLPDRYIDHGAPNDQI 709

Query: 693 ALAGLTGHHIAATALSLLGRTREALLL 719
             AGL+  HI AT LSLL   +EAL  
Sbjct: 710 DEAGLSSKHILATVLSLLEMPKEALFF 736


>gi|7446974|pir||D71420 hypothetical protein - Arabidopsis thaliana
          Length = 703

 Score =  732 bits (1889), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/709 (53%), Positives = 488/709 (68%), Gaps = 69/709 (9%)

Query: 45  LCPSSSSITSSKLVTVSRICA-LPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLA 103
           L P+++S ++ +    +++CA L +  +++ ++ PTP+LD +  P+ +K+L++KELKQL+
Sbjct: 29  LKPNNNSHSNRR----AKVCASLAEKGEYYSNRPPTPLLDTINYPIHMKNLSVKELKQLS 84

Query: 104 VEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRR 163
            E+RS++   VSKT   L SSL  VELTVALH++F+ P DKILWDVG Q+Y HKILTGRR
Sbjct: 85  DELRSDVIFNVSKTGGHLGSSLGVVELTVALHYIFNTPQDKILWDVGHQSYPHKILTGRR 144

Query: 164 SLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGL--------GMAVARDIKGKRE 215
             + T+R+ +G+SG+T R ESE+D F  GH   ++SAGL        GMAV RD+KGK  
Sbjct: 145 GKMPTMRQTNGLSGFTKRGESEHDCFGTGHSSTTISAGLGNTINHSFGMAVGRDLKGKNN 204

Query: 216 CIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH-SLHPKIEESPKTSINALSST 274
            +V VI +G   AGQAYEAM+NAGYLDS+MIVILND++  SL     + P   + ALSS 
Sbjct: 205 NVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPSPPVGALSSA 264

Query: 275 LSRIQSSKSFRQLREVAK----------GMTKRIGRGMHEWAAKVDEYARGMIGPQGSTL 324
           LSR+QS+ + R+LREVAK          GMTK+IG  MH+ AAKVDEYARGMI   GS+L
Sbjct: 265 LSRLQSNPALRELREVAKASLLHFFSRMGMTKQIGGPMHQLAAKVDEYARGMISGTGSSL 324

Query: 325 FEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR------RAEDTQKS 378
           FEELGLYYIGPVDGHNI+DL+++L+EV S  + GPVL+HVVTE+ R      RA+D    
Sbjct: 325 FEELGLYYIGPVDGHNIDDLVAILKEVKSTRTTGPVLIHVVTEKGRGYPYAERADDKYHG 384

Query: 379 EAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQ 438
           +    + + A+        N +++Y   F EALV EAE DKD+V +HA M     L LFQ
Sbjct: 385 KTSVVKFDPAT-GRQFKTTNKTQSYTTYFAEALVAEAEVDKDVVAIHAAMGGGTGLNLFQ 443

Query: 439 EKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRF 498
            +FP R FDVG+AEQHA                             VV+DVD Q+LPVRF
Sbjct: 444 RRFPTRCFDVGIAEQHA-----------------------------VVHDVDLQKLPVRF 474

Query: 499 VITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRY 558
            +  AGLVG+DGPT CGAFD+TFM+CLPNMIVMAPSDE +L +MVAT  +IDDRP CFRY
Sbjct: 475 AMDRAGLVGADGPTHCGAFDVTFMACLPNMIVMAPSDEADLFNMVATAVAIDDRPSCFRY 534

Query: 559 PRGAIVRTDL-PGYRGIPIE--------IGKGKVLVEGKDVALLGYGAMVQNCLKARALL 609
           PRG  +   L PG +G+PIE        IGKG++L EG+ VALLGYG+ VQ+CL A  +L
Sbjct: 535 PRGNGIGVALPPGNKGVPIEKISLGVFQIGKGRILKEGERVALLGYGSAVQSCLGAAVML 594

Query: 610 SKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDS 669
            + G++VTVADARFCKPLD  L+R L ++H  LITVEEGSIGGFGSHV  F+ALDGLLD 
Sbjct: 595 EERGLNVTVADARFCKPLDRALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDG 654

Query: 670 GVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALL 718
            +KWRP+VLPD YI+H +P  QLA AGL   HIAATAL+L+G  REAL 
Sbjct: 655 KLKWRPMVLPDRYIDHGAPADQLAEAGLMPSHIAATALNLIGAPREALF 703


>gi|229463110|gb|ACQ66107.1| 1-deoxy-D-xylulose 5-phosphate synthase 2 [Salvia miltiorrhiza]
          Length = 724

 Score =  731 bits (1888), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 352/656 (53%), Positives = 468/656 (71%), Gaps = 9/656 (1%)

Query: 71  DFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVEL 130
           +F  DK PTPILD +  P  +K+L+++EL+ LA E+R E+   VSKT   L SSL   EL
Sbjct: 69  NFTGDKPPTPILDTINYPNHMKNLSVEELEGLADELREEIVYTVSKTGGHLSSSLGVSEL 128

Query: 131 TVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFN 190
           TVALHHVF+ P DKI+WDVG Q Y H+ILTGRRS +HT+R+  G++G+  R ES +D F 
Sbjct: 129 TVALHHVFNTPEDKIIWDVGHQAYPHEILTGRRSRMHTIRQTFGLAGFPKRDESAHDAFG 188

Query: 191 AGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
           AGH   S+SAGLGMAV RD+  K   +++VI +G   AGQAYEA++NAG+LDSN+I++LN
Sbjct: 189 AGHSSTSISAGLGMAVGRDLLHKNNHVISVIGDGAMTAGQAYEALNNAGFLDSNLIIVLN 248

Query: 251 DSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKV 309
           D++  SL     + P   + ALS  L+R+Q+S+ FRQLRE AKGMT+++G   HE A+KV
Sbjct: 249 DNKQVSLPTATIDGPAPPVGALSKALTRLQASRKFRQLREAAKGMTRQMGEQAHEIASKV 308

Query: 310 DEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN 369
           D Y +GM+G  G++LFEELG+YYIGPVDGHN+ED + + ++V  + + GPVL+H++TE  
Sbjct: 309 DTYMKGMMGKPGASLFEELGIYYIGPVDGHNVEDPVYIFKKVKEMPAPGPVLIHIITE-- 366

Query: 370 RRAEDTQKSEAIEKQQEGA-----SDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVV 424
            + +    +E    +  G      +    L     +++Y   F E+LV EAE D  IV +
Sbjct: 367 -KGKGYSPAEVAADKMHGVVKFDPTTGKQLKSKTNTKSYTQYFAESLVAEAEHDDRIVAI 425

Query: 425 HAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQ 484
           HA M     L  FQ++FP+R FDVG+AEQHAVTF+AGLA  GLKPFC I S+FLQR YDQ
Sbjct: 426 HAAMGGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGLATEGLKPFCTIYSSFLQRGYDQ 485

Query: 485 VVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVA 544
           VV+DVD Q+LPVRF++  AG+VG+DGPT CGAFD T+M+CLPNM VMA SD+ +L+ M+A
Sbjct: 486 VVHDVDLQKLPVRFMMDRAGVVGADGPTHCGAFDTTYMACLPNMFVMASSDKLDLMHMIA 545

Query: 545 TVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLK 604
           T A+IDDR  C  YP G       P  +G P+EIGKG++L EG  VA+LG+G +VQNCL 
Sbjct: 546 TAAAIDDRLSCVIYPEGTRRAPLPPNNKGTPLEIGKGRILKEGSRVAILGFGTIVQNCLA 605

Query: 605 ARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALD 664
           A  LL + GI VTVADARFCKPLD  L+++L Q H  LITVEEGSIGGF +H+SHF++L+
Sbjct: 606 AAQLLQEHGISVTVADARFCKPLDGDLIKKLVQEHEVLITVEEGSIGGFSAHISHFLSLN 665

Query: 665 GLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLLM 720
           GLLD  +KWRP+VLPD YI+H + T Q+  AGL+  HIA T +SL+G  +++L L+
Sbjct: 666 GLLDGNLKWRPMVLPDRYIDHGAQTDQIEEAGLSPKHIAGTVVSLIGGGKDSLHLI 721


>gi|374669414|gb|AEZ55865.1| chloroplast 1-deoxy-D-xylulose 5-phosphate synthase 1 [Mitragyna
           speciosa]
          Length = 669

 Score =  726 bits (1874), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/650 (57%), Positives = 469/650 (72%), Gaps = 8/650 (1%)

Query: 23  DQRKIEFLSSNISRELEISRINLCPSSSSITSSKLVTVSRICALPDIDDFFWDKEPTPIL 82
           D  K  FL SN     ++       SS  +  S  V  S    L +  +++  + PTP+L
Sbjct: 19  DSLKQRFLYSNWLYGTDLQFQFQSQSSQVMKKSNGVRAS----LSERGEYYSHRPPTPLL 74

Query: 83  DLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPV 142
           D +  P+ +K+L+ KELKQLA  +RS++   VSKT   L SSL  VELTVALH+VF+ P 
Sbjct: 75  DTINYPIHMKNLSTKELKQLADVLRSDIIFNVSKTGGHLGSSLGVVELTVALHYVFNCPQ 134

Query: 143 DKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGL 202
           DKILWDVG Q+Y HKILTGRR  + TLR+ DG+SG+T RSESEYD F AGH   S+SAGL
Sbjct: 135 DKILWDVGHQSYPHKILTGRRYKMPTLRQTDGLSGFTKRSESEYDCFGAGHSSTSISAGL 194

Query: 203 GMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH-SLHPKIE 261
           GMAV RD+KG++  +V VI +G   AGQAYEAM+NAGYLDS+MIVILND++  SL     
Sbjct: 195 GMAVGRDLKGRKNHVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATL 254

Query: 262 ESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQG 321
           + P   + ALSS LSR+QS++  R+LREVAKG+TK+IG  +HE AAKVDEYARG+I   G
Sbjct: 255 DGPVPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGSVHELAAKVDEYARGLISGSG 314

Query: 322 STLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSEAI 381
           STLFEELG YYIGPVDGH+I+DL+++L+EV S  + GPVL+HVVTE+ R     +K+   
Sbjct: 315 STLFEELGFYYIGPVDGHSIDDLVAILKEVKSTKTTGPVLIHVVTEKGRGYPYAEKAADK 374

Query: 382 EKQQEGASDSNSLPFGNYSRT--YDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQE 439
                    +    F +  +T  Y   F EALV EAE DKD+V +HA M     L LF  
Sbjct: 375 YHGVVKFDPATGKQFKSSGKTQSYTTYFAEALVAEAEADKDVVAIHAAMGGGTGLNLFLH 434

Query: 440 KFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFV 499
           +FP R FDVG+AEQHAVTF+AGLAC GLKPFC I S+F+QRAYDQVV+DVD Q+LPVRF 
Sbjct: 435 RFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFA 494

Query: 500 ITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYP 559
           +  AGLVG+DGPT CGAFD+ FM+CLPNM+VMAPSDE E+  MVAT A+IDDRP C RYP
Sbjct: 495 MDRAGLVGADGPTHCGAFDVAFMACLPNMVVMAPSDEAEVFHMVATAAAIDDRPSCLRYP 554

Query: 560 RGAIVRTDL-PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTV 618
           RG  +  +L PG +GIP+E+GKG++L+EG+ VALLGYG  VQ+CL A AL+   G+ +TV
Sbjct: 555 RGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAAAALVEPHGLRLTV 614

Query: 619 ADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLD 668
           ADARFCKPLD  L+R L ++H  LITVEEGSIGGFGSHV+ F+AL+GLLD
Sbjct: 615 ADARFCKPLDHSLIRSLAKSHEVLITVEEGSIGGFGSHVAQFMALNGLLD 664


>gi|4185881|emb|CAA07554.1| 1-deoxy-D-xylulose-5-phosphate synthase [Chlamydomonas reinhardtii]
          Length = 735

 Score =  725 bits (1872), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/668 (53%), Positives = 472/668 (70%), Gaps = 23/668 (3%)

Query: 65  ALPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSS 124
           ++ +ID++      TP+LD V  P+ LK+   ++LKQL  E+RS++   VS+T   L SS
Sbjct: 65  SVEEIDEWRDVGPKTPLLDTVNYPVHLKNFNNEQLKQLCKELRSDIVHTVSRTGGHLSSS 124

Query: 125 LAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSES 184
           L  VELTVA+H+VF+ P DKI+WDVG Q Y HKILTGRR  + T+R+ +G+SG+T R ES
Sbjct: 125 LGVVELTVAMHYVFNTPEDKIIWDVGHQAYGHKILTGRRKGMATIRQTNGLSGFTKRDES 184

Query: 185 EYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSN 244
           EYDPF AGH   S+SA LGMAV RD+KGK+  ++ VI +G    G AYEAM++AG+LD N
Sbjct: 185 EYDPFGAGHSSTSISAALGMAVGRDVKGKKNSVIAVIGDGAITGGMAYEAMNHAGFLDKN 244

Query: 245 MIVILNDSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMH 303
           MIVILND++  SL  +     +  + ALSS L+R+Q+++  R+LRE+AKG+TK++   + 
Sbjct: 245 MIVILNDNQQVSLPTQYNNKNQDPVGALSSALARLQANRPLRELREIAKGVTKQLPDVVQ 304

Query: 304 EWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVH 363
           +  AK+DEYARGMI   GSTLFEELGLYYIGPVDGHN++DLI+VL EV S  ++GPVLVH
Sbjct: 305 KATAKIDEYARGMISGTGSTLFEELGLYYIGPVDGHNLDDLIAVLSEVRSAETVGPVLVH 364

Query: 364 VVTEENRR---AEDTQ-KSEAIEK-----QQEGASDSNSLPFGNYSRTYDDCFIEALVME 414
           VVTE+ R    AE  Q K   + K      ++  + + ++ + NY       F +AL  E
Sbjct: 365 VVTEKGRGYLPAETAQDKMHGVVKFDPRTGKQVQAKTKAMSYTNY-------FADALTAE 417

Query: 415 AEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIP 474
           AE+D  IV VHA M     L  F++KFP+R FDVG+AEQHAVTF+AGLAC GL PFC I 
Sbjct: 418 AERDSRIVAVHAAMAGGTGLYRFEKKFPDRTFDVGIAEQHAVTFAAGLACEGLVPFCTIY 477

Query: 475 SAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPS 534
           S F+QR YDQ+V+DV  Q+LPVRF +  AGLVG+DG T CGAFD+TFM+ LP+MI MAPS
Sbjct: 478 STFMQRGYDQIVHDVSLQKLPVRFAMDRAGLVGADGSTHCGAFDVTFMASLPHMITMAPS 537

Query: 535 DEDELVDMVATVASIDDRPVCFRYPRGAIVRTDLPGY------RGIPIEIGKGKVLVEGK 588
           +E EL++MVAT A+IDD P CFR+PRG  +  DL  Y      +G+P+E+GKG V  +GK
Sbjct: 538 NEAELINMVATCAAIDDAPSCFRFPRGNGLGLDLAAYGISKDLKGVPLEVGKGVVRRQGK 597

Query: 589 DVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEG 648
           DV L+ YG+ V   L A  +L + G+  TV DARFCKPLD KL+R   + H  +IT+EEG
Sbjct: 598 DVCLVAYGSSVNEALAAADMLERDGVSTTVIDARFCKPLDTKLIRSAAKEHPVMITIEEG 657

Query: 649 SIGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALS 708
           S+GGF +HV  F+AL+GLLD G+K+RP+ LPD YI+H     QLA+AGLT  HIA+TAL+
Sbjct: 658 SVGGFAAHVMQFLALEGLLDGGLKFRPMTLPDRYIDHGDYRDQLAMAGLTSQHIASTALT 717

Query: 709 LLGRTREA 716
            LGR ++A
Sbjct: 718 TLGRAKDA 725


>gi|449500270|ref|XP_004161053.1| PREDICTED: LOW QUALITY PROTEIN: probable
           1-deoxy-D-xylulose-5-phosphate synthase 2,
           chloroplastic-like [Cucumis sativus]
          Length = 724

 Score =  725 bits (1872), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 357/659 (54%), Positives = 465/659 (70%), Gaps = 13/659 (1%)

Query: 72  FFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELT 131
           F  DK  TPILD +  P+ +K+L+I+EL++L+ EIR E+   VSKT   L SSL   ELT
Sbjct: 67  FTGDKPSTPILDTINYPIHMKNLSIEELQELSNEIREEIVYTVSKTGGHLSSSLGVAELT 126

Query: 132 VALHHVFHAPVDKILWDVGE---QTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDP 188
           VALHHVF  P DKI+WD        YAHK+LTGRR  +HT+R+  G++G+  R ES +D 
Sbjct: 127 VALHHVFATPEDKIIWDFSYLYLXAYAHKMLTGRRGRMHTIRQTFGLAGFPKREESVHDA 186

Query: 189 FNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVI 248
           F  GH   S+SAGLGMAV RDI GK   +V+VI +G    G AYEA++NAGYLDSN+IVI
Sbjct: 187 FGVGHSSTSISAGLGMAVGRDILGKNNHVVSVIGDGAMTGGMAYEALNNAGYLDSNLIVI 246

Query: 249 LNDSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAA 307
           LND+R  SL     + P T + AL+  L+++Q+SK  RQLRE AK ++K++G   H  AA
Sbjct: 247 LNDNRQVSLPTATIDGPATPVGALNKALTKLQASKKLRQLREAAKAVSKQMGGETHGIAA 306

Query: 308 KVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTE 367
           KV+   RGM+G  G++LFEELG+YYIGPVDGHN+EDL+ +L++V ++ + GPVL+HV+TE
Sbjct: 307 KVEHCVRGMVGGTGASLFEELGIYYIGPVDGHNVEDLVYILKQVKAMPASGPVLIHVITE 366

Query: 368 ENRRAEDTQKSEAIEKQQEGASD-----SNSLPFGNYSRTYDDCFIEALVMEAEKDKDIV 422
              + +    +E    +  G  +        +     + +Y   F ++L+ EAE+D  IV
Sbjct: 367 ---KGKGYPPAEIAADKMHGVVNFDPKSGKQMKKKTETLSYTQYFADSLIAEAERDDKIV 423

Query: 423 VVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAY 482
            +HA M     L  FQ++FP R FDVG+AEQHAVTF+AGLA  GLKPFC I S+FLQRAY
Sbjct: 424 AIHAAMGGGTGLNYFQKQFPNRCFDVGIAEQHAVTFAAGLATEGLKPFCAIYSSFLQRAY 483

Query: 483 DQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDM 542
           DQV +DVD Q+LPVRF I  AGLVG+DGPT CGAFD TFM+CLPNM+VMAPS+E EL++M
Sbjct: 484 DQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVMAPSNEAELMNM 543

Query: 543 VATVASIDDRPVCFRYPRGAIVRTDLP-GYRGIPIEIGKGKVLVEGKDVALLGYGAMVQN 601
           VAT A+IDDRP CFRYPRG  +   LP   +G P+E+GKG++L EG  VA+LGYG +VQ+
Sbjct: 544 VATAAAIDDRPSCFRYPRGNGIGCVLPLNNKGTPLEVGKGRILREGNRVAILGYGTIVQS 603

Query: 602 CLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFI 661
           CL A  +L + GI +TVADARFCKPLD +LV++L + H  L+TVEEGSIGGF SHVSHF+
Sbjct: 604 CLAAANVLQEYGIQITVADARFCKPLDGELVKQLARQHEILLTVEEGSIGGFSSHVSHFL 663

Query: 662 ALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLLM 720
            L+GLLD  +KWR +VLPD YI+H S   Q   AGL+   IAAT LSL+G+ ++   L+
Sbjct: 664 GLNGLLDGNLKWRALVLPDRYIDHGSQKDQTQEAGLSWKDIAATVLSLIGKGKDCFQLV 722


>gi|159488107|ref|XP_001702062.1| 1-deoxy-D-xylulose 5-phosphate synthase [Chlamydomonas reinhardtii]
 gi|158271436|gb|EDO97255.1| 1-deoxy-D-xylulose 5-phosphate synthase [Chlamydomonas reinhardtii]
          Length = 708

 Score =  725 bits (1871), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/668 (53%), Positives = 472/668 (70%), Gaps = 23/668 (3%)

Query: 65  ALPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSS 124
           ++ +ID++      TP+LD V  P+ LK+   ++LKQL  E+RS++   VS+T   L SS
Sbjct: 38  SVEEIDEWRDVGPKTPLLDTVNYPVHLKNFNNEQLKQLCKELRSDIVHTVSRTGGHLSSS 97

Query: 125 LAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSES 184
           L  VELTVA+H+VF+ P DKI+WDVG Q Y HKILTGRR  + T+R+ +G+SG+T R ES
Sbjct: 98  LGVVELTVAMHYVFNTPEDKIIWDVGHQAYGHKILTGRRKGMATIRQTNGLSGFTKRDES 157

Query: 185 EYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSN 244
           EYDPF AGH   S+SA LGMAV RD+KGK+  ++ VI +G    G AYEAM++AG+LD N
Sbjct: 158 EYDPFGAGHSSTSISAALGMAVGRDVKGKKNSVIAVIGDGAITGGMAYEAMNHAGFLDKN 217

Query: 245 MIVILNDSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMH 303
           MIVILND++  SL  +     +  + ALSS L+R+Q+++  R+LRE+AKG+TK++   + 
Sbjct: 218 MIVILNDNQQVSLPTQYNNKNQDPVGALSSALARLQANRPLRELREIAKGVTKQLPDVVQ 277

Query: 304 EWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVH 363
           +  AK+DEYARGMI   GSTLFEELGLYYIGPVDGHN++DLI+VL EV S  ++GPVLVH
Sbjct: 278 KATAKIDEYARGMISGTGSTLFEELGLYYIGPVDGHNLDDLIAVLSEVRSAETVGPVLVH 337

Query: 364 VVTEENRR---AEDTQ-KSEAIEK-----QQEGASDSNSLPFGNYSRTYDDCFIEALVME 414
           VVTE+ R    AE  Q K   + K      ++  + + ++ + NY       F +AL  E
Sbjct: 338 VVTEKGRGYLPAETAQDKMHGVVKFDPRTGKQVQAKTKAMSYTNY-------FADALTAE 390

Query: 415 AEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIP 474
           AE+D  IV VHA M     L  F++KFP+R FDVG+AEQHAVTF+AGLAC GL PFC I 
Sbjct: 391 AERDSRIVAVHAAMAGGTGLYRFEKKFPDRTFDVGIAEQHAVTFAAGLACEGLVPFCTIY 450

Query: 475 SAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPS 534
           S F+QR YDQ+V+DV  Q+LPVRF +  AGLVG+DG T CGAFD+TFM+ LP+MI MAPS
Sbjct: 451 STFMQRGYDQIVHDVSLQKLPVRFAMDRAGLVGADGSTHCGAFDVTFMASLPHMITMAPS 510

Query: 535 DEDELVDMVATVASIDDRPVCFRYPRGAIVRTDLPGY------RGIPIEIGKGKVLVEGK 588
           +E EL++MVAT A+IDD P CFR+PRG  +  DL  Y      +G+P+E+GKG V  +GK
Sbjct: 511 NEAELINMVATCAAIDDAPSCFRFPRGNGLGLDLAAYGISKDLKGVPLEVGKGVVRRQGK 570

Query: 589 DVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEG 648
           DV L+ YG+ V   L A  +L + G+  TV DARFCKPLD KL+R   + H  +IT+EEG
Sbjct: 571 DVCLVAYGSSVNEALAAADMLERDGVSTTVIDARFCKPLDTKLIRSAAKEHPVMITIEEG 630

Query: 649 SIGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALS 708
           S+GGF +HV  F+AL+GLLD G+K+RP+ LPD YI+H     QLA+AGLT  HIA+TAL+
Sbjct: 631 SVGGFAAHVMQFLALEGLLDGGLKFRPMTLPDRYIDHGDYRDQLAMAGLTSQHIASTALT 690

Query: 709 LLGRTREA 716
            LGR ++A
Sbjct: 691 TLGRAKDA 698


>gi|11994386|dbj|BAB02345.1| 1-deoxyxylulose-5-phosphate synthase; transketolase [Arabidopsis
           thaliana]
          Length = 604

 Score =  724 bits (1869), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/640 (57%), Positives = 454/640 (70%), Gaps = 48/640 (7%)

Query: 89  LRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDKILWD 148
           + +K+L+IKELK L+ E+RS++   VSKT   L S+L  VELTVALH++F+ P DKILWD
Sbjct: 1   MHMKNLSIKELKVLSDELRSDVIFNVSKTGGHLGSNLGVVELTVALHYIFNTPHDKILWD 60

Query: 149 VGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVAR 208
           VG Q+Y HKILTGRR  + T+R+ +G+SGYT R ESE+D F  GH   ++SAGLGMAV R
Sbjct: 61  VGHQSYPHKILTGRRGKMKTIRQTNGLSGYTKRRESEHDSFGTGHSSTTLSAGLGMAVGR 120

Query: 209 DIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKIE-ESPKTS 267
           D+KG    +V+VI +G   AGQAYEAM+NAGYL SNMIVILND++    P    + P   
Sbjct: 121 DLKGMNNSVVSVIGDGAMTAGQAYEAMNNAGYLHSNMIVILNDNKQVSLPTANLDGPTQP 180

Query: 268 INALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEE 327
           + ALS  LSR+QS+                                 GMI    STLFEE
Sbjct: 181 VGALSCALSRLQSNC--------------------------------GMIRETSSTLFEE 208

Query: 328 LGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR------RAEDTQKSEAI 381
           LG +Y+GPVDGHNI+DL+S+L+ + S  ++GPVL+HVVTE+ R      RA+D       
Sbjct: 209 LGFHYVGPVDGHNIDDLVSILETLKSTKTIGPVLIHVVTEKGRGYPYAERADDKYHGVLK 268

Query: 382 EKQQEGASDSNSLPFGNYSRT--YDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQE 439
              + G        F N S+T  Y  CF+EAL+ EAE DKDIV +HA M     L LF+ 
Sbjct: 269 FDPETGKQ------FKNISKTQSYTSCFVEALIAEAEADKDIVAIHAAMGGGTMLNLFES 322

Query: 440 KFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFV 499
           +FP R FDVG+AEQHAVTF+AGLAC GLKPFC I S+F+QRAYDQVV+DVD Q+LPVRF 
Sbjct: 323 RFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCTIYSSFMQRAYDQVVHDVDLQKLPVRFA 382

Query: 500 ITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYP 559
           I  AGL+G+DGPT CGAFD+TFM+CLPNMIVMAPSDE EL +MVAT A+IDDRP CFRY 
Sbjct: 383 IDRAGLMGADGPTHCGAFDVTFMACLPNMIVMAPSDEAELFNMVATAAAIDDRPSCFRYH 442

Query: 560 RGAIVRTDL-PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTV 618
           RG  +   L PG +G+P++IG+G++L +G+ VALLGYG+ VQ CL+A ++LS+ G+ +TV
Sbjct: 443 RGNGIGVSLPPGNKGVPLQIGRGRILRDGERVALLGYGSAVQRCLEAASMLSERGLKITV 502

Query: 619 ADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWRPIVL 678
           ADARFCKPLD+ L+R L ++H  LITVEEGSIGGFGSHV  F+ALDGLLD  +KWRP+VL
Sbjct: 503 ADARFCKPLDVALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGKLKWRPMVL 562

Query: 679 PDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALL 718
           PD YIEH SP  QLA AGLT  HIAATAL+L+G  REAL 
Sbjct: 563 PDRYIEHGSPMDQLAEAGLTASHIAATALNLMGTPREALF 602


>gi|147855372|emb|CAN83878.1| hypothetical protein VITISV_003880 [Vitis vinifera]
          Length = 713

 Score =  721 bits (1861), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/650 (55%), Positives = 465/650 (71%), Gaps = 10/650 (1%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           +K  T ILD + +P  +K+L+I+EL+ LA E+R EL  +VSKT   L +SL   ELTVAL
Sbjct: 61  EKPSTSILDTINHPKHMKNLSIEELEMLADELREELVYVVSKTGGHLSASLGVAELTVAL 120

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           HHVF+ P DKI+WDVG Q Y HKILT RRS +HT+R+  G++G+  R ES +D F AGH 
Sbjct: 121 HHVFNTPDDKIIWDVGHQAYPHKILTARRSRMHTIRQTSGLAGFPKRDESVHDAFGAGHS 180

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SAGLGMAVARD+  K   ++ VI +G   AGQAYEAM+NAGYLDSN I+ILND+  
Sbjct: 181 STSISAGLGMAVARDLLRKNNHVIAVIGDGAMTAGQAYEAMNNAGYLDSNXIIILNDNNQ 240

Query: 255 -SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYA 313
            SL     + P   + ALS  L R+QSS+ F+QL + AK +T+R+G   HE AAKVD Y 
Sbjct: 241 VSLPTATADGPAPPVGALSKALKRLQSSRKFQQLHQTAKAITERVGGQAHEIAAKVDLYL 300

Query: 314 RGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAE 373
           RGMI   G+  FEELGL+YIGPVDGHN+E+L+ +L+ V ++   G VL+H+VTE   + +
Sbjct: 301 RGMINGLGACFFEELGLHYIGPVDGHNMEELVHILKVVKAIPGQGAVLIHIVTE---KGK 357

Query: 374 DTQKSEAIEKQQEGA-----SDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGM 428
               +EA   +  G           L   + + +Y   F E+L+ EAE+D  IV +HA M
Sbjct: 358 GYAPAEAAPDKMHGVVKFDPHSGKQLKSKSSTLSYTQYFAESLIAEAERDDKIVAIHAAM 417

Query: 429 EMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVND 488
                L LFQ++FP R FDVG+AEQHAVTF+AGLA  GLKPFC I S+FLQRA+DQVV+D
Sbjct: 418 GGGTGLNLFQKRFPNRCFDVGIAEQHAVTFAAGLATEGLKPFCAIYSSFLQRAFDQVVHD 477

Query: 489 VDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVAS 548
           VD Q+LPVRF +  AGLVG+DGPT CGAFD TFM+CLPNM+VMAPS E EL++MVAT A+
Sbjct: 478 VDLQKLPVRFAMDRAGLVGADGPTHCGAFDTTFMACLPNMVVMAPSCERELMNMVATAAA 537

Query: 549 IDDRPVCFRYPRGAIVRTDLPGY-RGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARA 607
           IDDRP CFRYPRG  + + +P + +GIP+E+GKG+VL EG  VA+LGYG +VQ+C+ A  
Sbjct: 538 IDDRPSCFRYPRGNGIGSIIPPFNKGIPLEVGKGRVLEEGTRVAILGYGTIVQSCVAASH 597

Query: 608 LLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLL 667
           LL + GI  TV DARFCKPLD  L+R+L   H  L+TVEEGSIGGFGSHVSHF+AL+GLL
Sbjct: 598 LLQRFGISATVVDARFCKPLDGDLIRQLALEHEVLLTVEEGSIGGFGSHVSHFLALNGLL 657

Query: 668 DSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREAL 717
           D  +KWR ++LPD YI+H S  +Q+  AGLT  HIAAT L+L+G  ++AL
Sbjct: 658 DGTLKWRAMMLPDRYIDHGSQREQIEEAGLTSKHIAATVLALIGENKDAL 707


>gi|145342439|ref|XP_001416190.1| 1-deoxy-D-xylulose-5-phosphate synthase plastid precursor
           [Ostreococcus lucimarinus CCE9901]
 gi|144576415|gb|ABO94483.1| 1-deoxy-D-xylulose-5-phosphate synthase plastid precursor
           [Ostreococcus lucimarinus CCE9901]
          Length = 746

 Score =  721 bits (1860), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 364/664 (54%), Positives = 469/664 (70%), Gaps = 24/664 (3%)

Query: 76  KEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALH 135
           K  TP+LD V+ P  LK L + +LKQ+A E+R++L   VS+T   L SSL  +ELTVAL+
Sbjct: 87  KPTTPLLDTVQFPSHLKGLNMDQLKQVAKELRADLIYNVSQTGGHLGSSLGVIELTVALN 146

Query: 136 HVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGC 195
           +VF  P DKI+WDVG Q Y HKILTGRR  ++T+R+  G+S +T RSES YD F AGH  
Sbjct: 147 YVFDQPNDKIIWDVGHQAYPHKILTGRRDQMNTMRQTGGLSPFTKRSESPYDCFGAGHSS 206

Query: 196 NSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH- 254
            S+SAGLGMAVARD++G    ++++I +G    G AYEAM+NAG+LD+NMI+ILND++  
Sbjct: 207 TSISAGLGMAVARDMQGGDNHVISIIGDGAITGGMAYEAMNNAGFLDTNMIIILNDNQQV 266

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           SL  +     +  + ALSST +R+QSS+  R+LRE AK +TK++   + E  AKVDEYAR
Sbjct: 267 SLPTQYNSMNQDPVGALSSTFARLQSSRPLRELRESAKAITKQMPTPVQEVTAKVDEYAR 326

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---R 371
           GMI   GSTLFEELGLYYIG VDGHN+EDL+++LQEV    S+GPVL+H+VTE+ R    
Sbjct: 327 GMISGSGSTLFEELGLYYIGTVDGHNLEDLVAILQEVKETKSVGPVLIHIVTEKGRGYSY 386

Query: 372 AEDTQ-KSEAIEK----QQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHA 426
           AED Q K   + K      E +  ++++P      TY   F +AL+ EA  D+ +V VHA
Sbjct: 387 AEDAQDKYHGVSKFDLASGEQSKSTDTIP------TYTKVFADALIGEAMADEKVVAVHA 440

Query: 427 GMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVV 486
            M     L  F++ F +R +DVG+AEQHAVTF+AGLAC GLKP C I S FLQR +DQVV
Sbjct: 441 AMGGGTGLNHFEKYFADRTYDVGIAEQHAVTFAAGLACEGLKPMCTIYSTFLQRGWDQVV 500

Query: 487 NDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATV 546
           +DV  Q+LPVRF +  AGLVG+DGPT  GA+D+TFM+CLP+M+VMAP DE EL  MVAT 
Sbjct: 501 HDVALQKLPVRFAMDRAGLVGADGPTHAGAYDVTFMACLPDMVVMAPMDEAELCHMVATS 560

Query: 547 ASIDDRPVCFRYPRGAIVRTDL---------PGYRGIPIEIGKGKVLVEGKDVALLGYGA 597
            +IDDRP CFRYPRGA V  ++         PGY+G+ ++IGKG+VL EG DV LLGYG 
Sbjct: 561 LAIDDRPSCFRYPRGAGVGVNMENESVKVLNPGYKGMVLDIGKGRVLREGTDVVLLGYGT 620

Query: 598 MVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHV 657
              NCL A  +L + G+  TVADARFCKPLD++L+R L ++H   ITVEEGSIGGF SHV
Sbjct: 621 PTNNCLLAAQMLQEFGVSATVADARFCKPLDVELIRRLAKSHPVFITVEEGSIGGFASHV 680

Query: 658 SHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREAL 717
            HF+A DGLLD G+K RP+VLPD  I+H S   QL  AGL+  HIA+TALSL+G+  E+L
Sbjct: 681 LHFLATDGLLDGGLKVRPMVLPDRPIDHGSYAFQLNEAGLSVSHIASTALSLVGKQNESL 740

Query: 718 LLMC 721
            ++ 
Sbjct: 741 EVLA 744


>gi|308800422|ref|XP_003074992.1| Dxs 1-deoxy-D-xylulose-5-phosphate synthase plastid precursor (IC)
           [Ostreococcus tauri]
 gi|119358853|emb|CAL52263.2| Dxs 1-deoxy-D-xylulose-5-phosphate synthase plastid precursor (IC)
           [Ostreococcus tauri]
          Length = 741

 Score =  718 bits (1854), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 361/656 (55%), Positives = 468/656 (71%), Gaps = 16/656 (2%)

Query: 76  KEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALH 135
           K  TP+LD +  P  LKSLT+ +L Q+A E+R++L   VS+T   L SSL  +ELTVAL+
Sbjct: 82  KPATPLLDTINFPSHLKSLTMGQLNQVAKELRADLIYNVSQTGGHLGSSLGVIELTVALN 141

Query: 136 HVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGC 195
           +VF  P DKI+WDVG Q Y HKILTGRR  ++T+R+  G+S +T RSES YD F AGH  
Sbjct: 142 YVFDQPEDKIIWDVGHQAYPHKILTGRRDKMNTMRQTGGLSPFTKRSESPYDCFGAGHSS 201

Query: 196 NSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH- 254
            S+SAGLGMAVARD++G+   ++++I +G    G AYEAM+NAG+LD+NMI+ILND++  
Sbjct: 202 TSISAGLGMAVARDMQGEDFHVISIIGDGAITGGMAYEAMNNAGFLDTNMIIILNDNQQV 261

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           SL  +     +  + ALSST +R+QSS+  R+LRE AK +TK++   + E  AKVDEYAR
Sbjct: 262 SLPTQYNSLNQDPVGALSSTFARLQSSRPLRELRESAKAITKQMPTPVQEVTAKVDEYAR 321

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---R 371
           GMI   GSTLFEELGLYYIG VDGHN+EDL+++LQEV    S+GPVL+H+VTE+ R    
Sbjct: 322 GMISGSGSTLFEELGLYYIGTVDGHNLEDLVAILQEVKETRSVGPVLIHIVTEKGRGYSY 381

Query: 372 AEDTQ-KSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
           AED Q K   + K    +   + L     + +Y   F +AL+ EA  D  +V VHA M  
Sbjct: 382 AEDAQDKYHGVSKFDLASGRQSQLK--ENAPSYTKVFADALIGEAMMDDKVVAVHAAMGG 439

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L  F++ F +R +DVG+AEQHAVTF+AGLAC GLKP C I S FLQR +DQVV+DV 
Sbjct: 440 GTGLNHFEKYFADRTYDVGIAEQHAVTFAAGLACEGLKPMCTIYSTFLQRGWDQVVHDVA 499

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q+LPVRF +  AGLVG+DGPT  GA+D+TFM+CLP+M+VMAP +E EL  MVAT  +ID
Sbjct: 500 LQKLPVRFAMDRAGLVGADGPTHAGAYDVTFMACLPDMVVMAPMNEAELCHMVATSLAID 559

Query: 551 DRPVCFRYPRGAIVRTDL---------PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQN 601
           DRP CFRYPRGA V  ++         PGY+G+ ++IGKG+VL EG DV LLGYG    N
Sbjct: 560 DRPSCFRYPRGAGVGLNMEDESVKLVNPGYKGMVLDIGKGRVLQEGTDVVLLGYGTPTNN 619

Query: 602 CLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFI 661
           CL+A  +L K G+ VTVADARFCKPLD +L+R L ++H   ITVEEG+IGGF SHV HF+
Sbjct: 620 CLQAAQMLQKFGVSVTVADARFCKPLDGELIRRLAKSHPIFITVEEGAIGGFASHVMHFL 679

Query: 662 ALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREAL 717
           A DGLLDSG+K+RP++LPD  I+H S + Q+  AGL+  HIA+TALSL+G+  E+L
Sbjct: 680 ATDGLLDSGLKFRPMILPDRPIDHGSYSFQVNEAGLSASHIASTALSLVGKQHESL 735


>gi|307103505|gb|EFN51764.1| hypothetical protein CHLNCDRAFT_59788 [Chlorella variabilis]
          Length = 720

 Score =  716 bits (1849), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/707 (51%), Positives = 478/707 (67%), Gaps = 46/707 (6%)

Query: 42  RINLCPSSSSITSS-----KLVTVSRIC-ALPDIDDFFWDK-------------EPTPIL 82
           R  + PS   I+       ++    R+  A P  D+  WD               PTP+L
Sbjct: 16  RARMAPSGPPISQGMRIRGRVSQARRVVGATPAADNNAWDTLSIDELQQWEETGPPTPLL 75

Query: 83  DLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPV 142
           D +  P+ LK+L + +LK+L  E+R++L   V+KT   L SSL  VELT+ALH+VF+ P 
Sbjct: 76  DTINYPVHLKNLGLNDLKKLCKELRADLIHSVAKTGGHLGSSLGVVELTLALHYVFNTPE 135

Query: 143 DKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGL 202
           DKI++DVG Q Y HK+LTGRRS +HT+R++ G+SG+T RSES YDPF AGH   S+SA L
Sbjct: 136 DKIIYDVGHQAYIHKMLTGRRSKMHTIRQQGGLSGFTKRSESPYDPFGAGHSSTSISAAL 195

Query: 203 GMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH-SLHPKIE 261
           GMAV RD+KG++  +V VI +G    G AYEAM++AG+LD+NMIVILND++  SL  +  
Sbjct: 196 GMAVGRDVKGRKNNVVAVIGDGAITGGMAYEAMNHAGFLDTNMIVILNDNQQVSLPTQYN 255

Query: 262 ESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQG 321
              +  + ALSSTL+R+Q+++  R+LRE+AKG+TK++   +    AK+DEYARGMI   G
Sbjct: 256 GKNQEPVGALSSTLARLQANRQLRELREIAKGVTKQLPGVIQNATAKIDEYARGMISGTG 315

Query: 322 STLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR------RAED- 374
           STLFEELG YYIGPVDGHN++DLI VL E+ +  ++GPVL+HVVTE+ R       A D 
Sbjct: 316 STLFEELGFYYIGPVDGHNLQDLIDVLSEIKTTETVGPVLLHVVTEKGRGYLPAESASDK 375

Query: 375 ----TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
                Q      KQ +  S + S  F NY       F +ALV EA+KD  IV +HA M  
Sbjct: 376 MHGVVQYDTVTGKQVKAKSQAQS--FTNY-------FADALVAEAKKDSRIVGIHAAMGG 426

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              +  F++ FPER +DVG+AEQHAVTF+AGLAC GL PF  I S+FLQR YDQVV+DV 
Sbjct: 427 GTGMNRFEKVFPERVYDVGIAEQHAVTFAAGLACEGLAPFVAIYSSFLQRGYDQVVHDVS 486

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q LPVRF +  AGLVG+DG T CGAFD+ +M+CLPNM+VMAPS+E EL++MVAT A+ID
Sbjct: 487 LQNLPVRFAMDRAGLVGADGATHCGAFDVAYMACLPNMVVMAPSNEAELINMVATCAAID 546

Query: 551 DRPVCFRYPRGAIVRTDL------PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLK 604
           DRP CFR+PRG+ V  DL      P  +G P+ IGK ++   G D+AL+GYG  V +CL 
Sbjct: 547 DRPSCFRFPRGSGVGIDLASEGITPDLKGTPMPIGKMRLRRSGADIALVGYGNPVNDCLA 606

Query: 605 ARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALD 664
           A  LL + G+  TV DARFCKPLD  ++R+L + H  ++TVEEGSIGGF +HV  F+ L+
Sbjct: 607 AAELLQQAGVSATVVDARFCKPLDTDMLRKLAKEHPLMVTVEEGSIGGFAAHVMQFLCLE 666

Query: 665 GLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
           GL+D   K+RP+ LPD YIEH +  +QLA AGL+  HIAATAL++LG
Sbjct: 667 GLMDGNFKFRPMTLPDRYIEHGTQAEQLAEAGLSASHIAATALAVLG 713


>gi|302850873|ref|XP_002956962.1| hypothetical protein VOLCADRAFT_107482 [Volvox carteri f.
           nagariensis]
 gi|300257680|gb|EFJ41925.1| hypothetical protein VOLCADRAFT_107482 [Volvox carteri f.
           nagariensis]
          Length = 728

 Score =  714 bits (1844), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/664 (53%), Positives = 460/664 (69%), Gaps = 34/664 (5%)

Query: 71  DFFWDKEP-TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVE 129
           D + D+ P TP+LD V  P+ +K+  + +LKQL  E+RS++   VS+T   L SSL  VE
Sbjct: 69  DEWQDRGPKTPLLDTVNYPVHIKNFNLDQLKQLCKELRSDIVHTVSRTGGHLSSSLGVVE 128

Query: 130 LTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPF 189
           LTVALH+VF+ P DKI+WDVG Q Y HKILTGRR  + T+R+ +G+SG+T R ESEYDPF
Sbjct: 129 LTVALHYVFNTPEDKIIWDVGHQAYGHKILTGRRKGMGTIRQTNGLSGFTKREESEYDPF 188

Query: 190 NAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVIL 249
            AGH   S+SA LGMAV RD+K K+  ++ VI +G    G AYEAM++AG+LD NMIV  
Sbjct: 189 GAGHSSTSISAALGMAVGRDVKSKKNNVIAVIGDGAITGGMAYEAMNHAGFLDKNMIV-- 246

Query: 250 NDSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKV 309
                SL  +     +  + ALSS L+R+Q+++  R+LRE+AKG+TK++   + +  AK+
Sbjct: 247 -----SLPTQYNNKNQDPVGALSSALARLQANRPLRELREIAKGVTKQLPDVVQKATAKI 301

Query: 310 DEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN 369
           DEYARGMI   GSTLFEELGLYYIGPVDGHN++DL++VL EV S  ++GPVLVHVVTE+ 
Sbjct: 302 DEYARGMISGTGSTLFEELGLYYIGPVDGHNVDDLVAVLNEVKSAETVGPVLVHVVTEKG 361

Query: 370 RR---AEDTQKS--------EAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKD 418
           R    AE  Q              KQQ+  + + ++ + NY       F +AL  EAE+D
Sbjct: 362 RGYLPAETAQDKMHGVVKFDPRTGKQQQ--AKTKAMSYTNY-------FADALTAEAERD 412

Query: 419 KDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFL 478
             IV VHA M     L  F+++FPER FDVG+AEQHAVTF+AGLAC GL PFC I S F+
Sbjct: 413 SRIVAVHAAMAGGTGLYRFEKRFPERVFDVGIAEQHAVTFAAGLACEGLVPFCTIYSTFM 472

Query: 479 QRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDE 538
           QR YDQ+V+DV  Q+LPVRF +  AGLVG+DG T CGAFD+TFM+ LP+MI MAPS+E E
Sbjct: 473 QRGYDQIVHDVSLQKLPVRFAMDRAGLVGADGSTHCGAFDVTFMASLPHMITMAPSNEAE 532

Query: 539 LVDMVATVASIDDRPVCFRYPRGAIVRTDLPGY------RGIPIEIGKGKVLVEGKDVAL 592
           LV+MVAT A+IDD P CFR+PRG  +  DL  Y      +G P+EIGKG V  +GKDV L
Sbjct: 533 LVNMVATAAAIDDAPSCFRFPRGNGLGLDLSQYGITKDLKGTPLEIGKGVVRRQGKDVCL 592

Query: 593 LGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGG 652
           L YG+ V   L A  +L + G+  TV DARFCKPLD  LVR   + H  +I++EEGSIGG
Sbjct: 593 LAYGSSVNEALAAAEMLERDGVSATVIDARFCKPLDTALVRMAAREHPVMISIEEGSIGG 652

Query: 653 FGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
           F +HV  F+AL+GLLD G+K+RP+ LPD YIEH     QLA+AGLT  HIA+TAL+ LGR
Sbjct: 653 FAAHVMQFLALEGLLDGGLKFRPMTLPDRYIEHGDYRDQLAMAGLTAQHIASTALTTLGR 712

Query: 713 TREA 716
            ++A
Sbjct: 713 AKDA 716


>gi|412990479|emb|CCO19797.1| 1-deoxy-D-xylulose-5-phosphate (DXP) synthase, plastid precursor
           [Bathycoccus prasinos]
          Length = 727

 Score =  714 bits (1842), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/664 (55%), Positives = 460/664 (69%), Gaps = 24/664 (3%)

Query: 76  KEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALH 135
           K  TP+LD +  P  LK+L+  +L+Q+A E+R++L   VS+T   L SSL  +ELTVAL+
Sbjct: 69  KPTTPLLDTINFPSHLKNLSADQLEQVAKELRADLIYNVSQTGGHLGSSLGVIELTVALN 128

Query: 136 HVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGC 195
           +VF  P DKI+WDVG Q Y HKILTGRR  ++T+R+ DG+S +T RSES +D F AGH  
Sbjct: 129 YVFDQPTDKIIWDVGHQAYPHKILTGRRDRMNTIRQTDGLSPFTKRSESPFDCFGAGHSS 188

Query: 196 NSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH- 254
            S+SAGLGMAVARD++GK   ++ VI +G    G AYEAM+NAGYLD+NMI+ILND++  
Sbjct: 189 TSISAGLGMAVARDMQGKSNQVIAVIGDGAITGGMAYEAMNNAGYLDTNMIIILNDNQQV 248

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           SL  +     +  + ALSST +R+QSSK  R+LRE AK +TK++   + E  AKVDEYAR
Sbjct: 249 SLPTQYNSLNQDPVGALSSTFARLQSSKPLRELRESAKAITKQMPTPVQEVTAKVDEYAR 308

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRR--- 371
           GMI   G+TLFEELGLYYIG VDGHN+ DL+++LQEV    S+GPVL+HVVTE+ R    
Sbjct: 309 GMISGSGATLFEELGLYYIGTVDGHNLNDLVAILQEVKETKSVGPVLIHVVTEKGRGYSF 368

Query: 372 AEDTQ-KSEAIEK----QQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHA 426
           AE  Q K   + K      E    S ++P      TY   F +A+V EA  D  IV VHA
Sbjct: 369 AESAQDKYHGVSKFDLASGEQKKASTTIP------TYTQVFADAMVGEAMLDDSIVAVHA 422

Query: 427 GMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVV 486
            M     +  F++ F ER FDVG+AEQHAVTF+AGLA  GLKP C I S FLQR +DQVV
Sbjct: 423 AMGGGTGINHFEKYFAERTFDVGIAEQHAVTFAAGLAAEGLKPMCTIYSTFLQRGFDQVV 482

Query: 487 NDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATV 546
           +DV  Q+LPVRF +  AGLVG+DGPT  GA+DITFM+CLP+M+VMAP +E EL  M+AT 
Sbjct: 483 HDVALQKLPVRFAMDRAGLVGADGPTHAGAYDITFMACLPDMVVMAPRNEAELCHMIATS 542

Query: 547 ASIDDRPVCFRYPRGAIVRTDL---------PGYRGIPIEIGKGKVLVEGKDVALLGYGA 597
            +IDD P CFRYPRG  +  DL         PGY+G+P+E+GKG+VL EG    LLGYG 
Sbjct: 543 FAIDDCPSCFRYPRGPGIGLDLELEGVKVGNPGYKGVPLEVGKGQVLREGTHACLLGYGT 602

Query: 598 MVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHV 657
              NCLKA  LL + GI VTVADARFCKPLD KL+R L + H  L+TVEEGS+GGF SHV
Sbjct: 603 PTNNCLKAAKLLEEYGISVTVADARFCKPLDEKLIRRLAKEHPILVTVEEGSVGGFASHV 662

Query: 658 SHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREAL 717
             F+ALDGLLD  +K RP++LPD  IEH S   QL  AGLT  HIA+T LSL G+T E+L
Sbjct: 663 LQFLALDGLLDGNLKVRPLLLPDVPIEHGSDQFQLEQAGLTPAHIASTVLSLQGKTAESL 722

Query: 718 LLMC 721
            ++ 
Sbjct: 723 QILA 726


>gi|251826344|gb|ACT21080.1| 1-deoxy-D-xylulose 5-phosphate synthase [Dunaliella salina]
          Length = 753

 Score =  705 bits (1819), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/656 (52%), Positives = 450/656 (68%), Gaps = 24/656 (3%)

Query: 74  WDKE--PTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELT 131
           WD +  PTP+LD V  P+ +K+  + +L+QL  E+R+E+   VSKT   L +SL  VELT
Sbjct: 88  WDTQGLPTPLLDTVNYPVHIKNFNMPQLRQLCKELRAEIVHGVSKTGGHLSASLGVVELT 147

Query: 132 VALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNA 191
           VA+H+VF AP DK +WDVG Q Y HKI+TGRR  + T+RK  G+SG+T R+ESEYDPF A
Sbjct: 148 VAMHYVFSAPDDKFIWDVGHQAYVHKIMTGRRDKMQTIRKTGGLSGFTKRAESEYDPFGA 207

Query: 192 GHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILND 251
           GH   S+SAGLGMAV RD K +   +V VI +G    G AYEAM++AG+LD NMIVILND
Sbjct: 208 GHSSTSISAGLGMAVGRDTKNRNNQVVAVIGDGAITGGMAYEAMNHAGFLDKNMIVILND 267

Query: 252 SRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVD 310
           ++  SL  +     +  + A++ TL+RIQ+++  R+LREVAKGMTK++   +    AK+D
Sbjct: 268 NQQVSLPTQYNSKNQAPVGAMAGTLARIQANRPLRELREVAKGMTKQLPTAVQNATAKID 327

Query: 311 EYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR 370
           EYARGMI   GSTLFEELGLYYIGP+DGHN++DLISVL EV S  ++GPVL+HV+TE+  
Sbjct: 328 EYARGMISGTGSTLFEELGLYYIGPLDGHNLDDLISVLSEVRSAETIGPVLIHVITEKGH 387

Query: 371 RAEDTQKSEAI---------EKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDI 421
             E  + S+           +  ++ AS   ++ + NY       F ++L+ EA++D  I
Sbjct: 388 GYEPAEASQDKMHGVVKFDPKTGKQFASKPKTMSYTNY-------FADSLIAEAKRDSRI 440

Query: 422 VVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRA 481
           + +HA M     L  F+   P+R FDVG+AEQHAVTFSAGLAC GL PFC I S FLQR 
Sbjct: 441 MAIHAAMAGGTGLTRFENALPDRVFDVGIAEQHAVTFSAGLACEGLVPFCTIYSTFLQRG 500

Query: 482 YDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVD 541
           YDQVV+DV  Q LPVRF +  AG+VG+DG T CGAFDIT+M+ LPNM+ MAPS+E EL++
Sbjct: 501 YDQVVHDVALQNLPVRFAMDRAGMVGADGATHCGAFDITYMASLPNMVCMAPSNEAELIN 560

Query: 542 MVATVASIDDRPVCFRYPRGAIVRTDLPG-----YRGIPIEIGKGKVLVEGKDVALLGYG 596
           MVAT A+IDDRP CFR+PRG  +  DL        +G P+EIGKG V  +G DV LL YG
Sbjct: 561 MVATAAAIDDRPSCFRFPRGNGIGVDLEAAGIKDMKGTPLEIGKGVVRRQGTDVCLLAYG 620

Query: 597 AMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSH 656
           + V   + A   L   G+  TV DARFCKPLD  L+R+  Q H  ++++EEG+IGGF +H
Sbjct: 621 SSVNEAMAAAEALQLDGVSATVIDARFCKPLDTDLIRKAAQEHPVMVSIEEGAIGGFAAH 680

Query: 657 VSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
           V  F+ L+GLLD G+K+RP+ +PD +IEH     QL LAGLT  HIA TAL +LGR
Sbjct: 681 VMQFLTLEGLLDGGLKFRPMCMPDRFIEHGDYRDQLNLAGLTPGHIAGTALQILGR 736


>gi|255070459|ref|XP_002507311.1| predicted protein [Micromonas sp. RCC299]
 gi|226522586|gb|ACO68569.1| predicted protein [Micromonas sp. RCC299]
          Length = 738

 Score =  704 bits (1818), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 357/661 (54%), Positives = 467/661 (70%), Gaps = 20/661 (3%)

Query: 76  KEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALH 135
           K  TP+LD V  P+ LK+L + +L+Q+A E+R++L   VS+T   L SSL  +ELTVAL+
Sbjct: 80  KPATPLLDTVNFPVHLKNLAVDQLQQVAKELRADLIYNVSQTGGHLGSSLGVIELTVALN 139

Query: 136 HVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGC 195
           +VF  P D+I+WDVG Q Y HK+LTGRR  + T+R+ +G+S +T RSES +D F AGH  
Sbjct: 140 YVFDQPNDRIIWDVGHQAYPHKMLTGRRDRMSTMRQTNGLSPFTKRSESPFDCFGAGHSS 199

Query: 196 NSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH- 254
            S+SAGLGMAVARD++G+   ++ VI +G    G AYEAM+NAGYLD+NMI+ILND++  
Sbjct: 200 TSISAGLGMAVARDMQGRSNHVIAVIGDGAITGGMAYEAMNNAGYLDTNMIIILNDNQQV 259

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           SL  +     +  + ALSST +R+QSSK  R+LRE AK +TK++   + E  AKVDEYAR
Sbjct: 260 SLPTQYNSLNQDPVGALSSTFARLQSSKPLRELRESAKAITKQMPVPVQEVTAKVDEYAR 319

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAED 374
           GMI   GSTLFEELGLYYIG VDGHN++DL+++L+EV S  S+GPVL+H+VTE+ R    
Sbjct: 320 GMISGSGSTLFEELGLYYIGTVDGHNLQDLVAILEEVKSTRSVGPVLIHIVTEKGR---G 376

Query: 375 TQKSEAIEKQQEGASDSNSLPFGNYSR------TYDDCFIEALVMEAEKDKDIVVVHAGM 428
              +EA + +  G S +  +  G   +      TY   F +ALV EA  D+++V VHA M
Sbjct: 377 YSYAEAAQDKYHGVS-TFDVASGKQKKSASGIPTYTQFFADALVGEAGLDENVVAVHAAM 435

Query: 429 EMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVND 488
                L  F++ F +R FDVG+AEQHAVTFSAGLA  GLKP C + S FLQR +DQVV+D
Sbjct: 436 GGGTGLNHFEKFFADRTFDVGIAEQHAVTFSAGLAVEGLKPVCAVYSTFLQRGFDQVVHD 495

Query: 489 VDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVAS 548
           V  Q+LPVRF +  AGLVG DGPT  GA+D+TFM+CLP+M+VMAP +E EL  MVAT  S
Sbjct: 496 VALQKLPVRFAMDRAGLVGEDGPTHAGAYDVTFMACLPDMVVMAPMNEAELCHMVATSIS 555

Query: 549 IDDRPVCFRYPRGAIVRTDL---------PGYRGIPIEIGKGKVLVEGKDVALLGYGAMV 599
           +DDRP CFRYPRG  V  DL         PGY+G  +EIGKG+++ EG DV LLGYG   
Sbjct: 556 VDDRPSCFRYPRGTGVGLDLIGEGVEMLRPGYKGGILEIGKGRIIREGIDVCLLGYGTCT 615

Query: 600 QNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSH 659
             C++A  +L + GI VTVADARFCKPLD K++R+L ++H  +ITVE+GSIGGF SHV  
Sbjct: 616 NRCIEAAEVLREFGISVTVADARFCKPLDTKMIRQLAKSHAAIITVEDGSIGGFASHVLQ 675

Query: 660 FIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLL 719
           F+ALDGLLD  +K RP+ LPD  IEH S + QL  AGL+  HIA+TALS+LG+ ++AL +
Sbjct: 676 FLALDGLLDGNLKVRPLTLPDRPIEHGSLSDQLQDAGLSSSHIASTALSVLGQKQQALEV 735

Query: 720 M 720
           +
Sbjct: 736 L 736


>gi|303274126|ref|XP_003056386.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226462470|gb|EEH59762.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 739

 Score =  702 bits (1813), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 359/662 (54%), Positives = 458/662 (69%), Gaps = 30/662 (4%)

Query: 76  KEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALH 135
           K  TP+LD V  P+ LK+L++++LKQ+A E+R++L   VS+T   L SSL  VELTVAL+
Sbjct: 73  KPATPLLDTVNYPVHLKNLSMEQLKQVAKELRADLIYNVSQTGGHLGSSLGVVELTVALN 132

Query: 136 HVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGC 195
           +VF  P D+I+WDVG Q Y HK+LTGRR  ++T+R+  G+S +T RSES +D F AGH  
Sbjct: 133 YVFDQPEDRIIWDVGHQAYPHKMLTGRRKQMNTMRRTRGLSPFTKRSESPFDCFGAGHSS 192

Query: 196 NSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH- 254
            S+SAGLGMAVARD++G+   ++ VI +G    G AYEAM+NAGYLD+NMI+ILND++  
Sbjct: 193 TSISAGLGMAVARDMQGRSNHVIAVIGDGAITGGMAYEAMNNAGYLDTNMIIILNDNQQV 252

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           SL  +     +  + ALSST +R+QSSK  R+LRE AK +TK++   + E  AKVDEYAR
Sbjct: 253 SLPTQYNSLNQDPVGALSSTFARLQSSKPLRELRESAKAITKQMPVPVQEVTAKVDEYAR 312

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAED 374
           GMI   GSTLFEELGLYYIG VDGHN++DL+++L+EV S  S+GPVL+H VTE+ R    
Sbjct: 313 GMISGSGSTLFEELGLYYIGTVDGHNLQDLVAILEEVKSTRSVGPVLIHTVTEKGR---G 369

Query: 375 TQKSEAIEKQQEGAS-----------DSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVV 423
              +EA + +  G S            S  +P      +Y   F +AL+ EA +D+ +V 
Sbjct: 370 YSYAEAAQDKYHGVSTFDVASGKQKKSSGGIP------SYTQVFADALIGEASRDESVVA 423

Query: 424 VHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYD 483
           VHA M     L  F+  F +R FDVG+AEQHAVTF+AGLA  GLKP C I S FLQR +D
Sbjct: 424 VHAAMGGGTGLNHFERFFADRTFDVGIAEQHAVTFAAGLAVEGLKPVCTIYSTFLQRGFD 483

Query: 484 QVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMV 543
           QVV+DV  Q+LPVRF +  AGLVG DGPT  GA+D+ FM+CLP+M+VMAP +E EL  MV
Sbjct: 484 QVVHDVALQKLPVRFAMDRAGLVGEDGPTHAGAYDVAFMACLPDMVVMAPMNEAELCHMV 543

Query: 544 ATVASIDDRPVCFRYPRGAIVRTDL---------PGYRGIPIEIGKGKVLVEGKDVALLG 594
           AT  +IDDRP CFRYPRGA V  DL         PGYRG  IE+GKG++L EG D+ LLG
Sbjct: 544 ATSIAIDDRPSCFRYPRGAGVGIDLEEEGVTMGNPGYRGKVIEVGKGQILQEGTDLCLLG 603

Query: 595 YGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFG 654
           YG     CL+A  +L +L I VTVADARFCKPLD  L+R+L +NH  +ITVEEGSIGGF 
Sbjct: 604 YGTCTNRCLEAAKMLEELDISVTVADARFCKPLDTSLIRQLAKNHAAMITVEEGSIGGFA 663

Query: 655 SHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTR 714
           SHV  F+ALDGLLD  +K RP+ LPD  IEH +   QL  AGL+   IA++ALSLLG   
Sbjct: 664 SHVLQFLALDGLLDGNLKVRPLTLPDRPIEHGAFEMQLLEAGLSSSQIASSALSLLGHEL 723

Query: 715 EA 716
           E+
Sbjct: 724 ES 725


>gi|194701502|gb|ACF84835.1| unknown [Zea mays]
          Length = 564

 Score =  689 bits (1777), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 340/565 (60%), Positives = 417/565 (73%), Gaps = 18/565 (3%)

Query: 168 TLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTM 227
           T+R+ +G++G+T R+ESEYD F  GH   ++SA LGMAV RD+KG +  +V VI +G   
Sbjct: 3   TMRQTNGLAGFTKRAESEYDSFGTGHSSTTISAALGMAVGRDLKGGKNNVVAVIGDGAMT 62

Query: 228 AGQAYEAMSNAGYLDSNMIVILNDSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQ 286
           AGQAYEAM+NAGYLDS+MIVILND++  SL     + P   + ALSS LS++QSS+  R+
Sbjct: 63  AGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPVPPVGALSSALSKLQSSRPLRE 122

Query: 287 LREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLIS 346
           LREVAKG+TK+IG  +HE AAKVDEYARGMI   GS+LFEELGLYYIGPVDGHNI+DLI+
Sbjct: 123 LREVAKGVTKQIGGSVHELAAKVDEYARGMISGPGSSLFEELGLYYIGPVDGHNIDDLIT 182

Query: 347 VLQEVASLGSMGPVLVHVVTEENR------RAEDTQKSEAIEKQQEGA---SDSNSLPFG 397
           +L +V S  + GPVL+HVVTE+ R      RA D     A      G    S + +L + 
Sbjct: 183 ILNDVKSTKTTGPVLIHVVTEKGRGYPYAERAADKYHGVAKFDPATGKQFKSPAKTLSYT 242

Query: 398 NYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVT 457
           NY       F EAL+ EAE+D  IV +HA M     L  F  +FP R FDVG+AEQHAVT
Sbjct: 243 NY-------FAEALIAEAEQDSKIVAIHAAMGGGTGLNYFLRRFPSRCFDVGIAEQHAVT 295

Query: 458 FSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAF 517
           F+AGLAC GLKPFC I S+FLQR YDQVV+DVD Q+LPVRF +  AGLVG+DGPT CGAF
Sbjct: 296 FAAGLACEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAF 355

Query: 518 DITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYPRGAIVRTDL-PGYRGIPI 576
           D+ +M+CLPNM+VMAPSDE EL  MVAT A+IDDRP CFRYPRG  V   L P Y+G P+
Sbjct: 356 DVAYMACLPNMVVMAPSDEAELCHMVATAAAIDDRPSCFRYPRGNGVGVPLPPNYKGTPL 415

Query: 577 EIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELC 636
           E+GKG++L+EG  VALLGYG+ VQ CL A +L+ + G+ VTVADARFCKPLD  L+R L 
Sbjct: 416 EVGKGRILLEGDRVALLGYGSAVQYCLTAASLVQRHGLKVTVADARFCKPLDHALIRSLA 475

Query: 637 QNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAG 696
           ++H  LITVEEGSIGGFGSHV+ F+ALDGLLD  +KWRP+VLPD YI+H SP  QLA AG
Sbjct: 476 KSHEVLITVEEGSIGGFGSHVAQFMALDGLLDGKLKWRPLVLPDRYIDHGSPADQLAEAG 535

Query: 697 LTGHHIAATALSLLGRTREALLLMC 721
           LT  HIAA+  ++LG+ REAL +M 
Sbjct: 536 LTPSHIAASVFNILGQNREALAIMA 560


>gi|384248886|gb|EIE22369.1| 1-deoxy-D-xylulose 5-phosphate synthase [Coccomyxa subellipsoidea
           C-169]
          Length = 732

 Score =  686 bits (1771), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 346/667 (51%), Positives = 458/667 (68%), Gaps = 26/667 (3%)

Query: 78  PTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHV 137
           PTP+LD V  P+ LK+  + +L+QL  E+RS++   VSKT   L +SL  VELTVALH+V
Sbjct: 60  PTPLLDTVNFPVHLKNFNMGQLRQLCKELRSDIVHTVSKTGGHLGASLGVVELTVALHYV 119

Query: 138 FHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNS 197
            + P DKI+WDVG Q Y HKILTGRRS + T+R+  G+SG+T+R+ESEYDPF AGH   S
Sbjct: 120 MNTPDDKIVWDVGHQAYGHKILTGRRSRMPTIRQTGGLSGFTNRAESEYDPFGAGHSSTS 179

Query: 198 VSAGLGMAVARDIK-------------GKRECIVTVISNGTTMAGQAYEAMSNAGYLDSN 244
           +SA LGMAVARD K             G++   V VI +G    G AYEAM++AG+LD N
Sbjct: 180 ISAALGMAVARDFKASTTSHDSNKYLCGRKNHCVAVIGDGAITGGMAYEAMNHAGFLDKN 239

Query: 245 MIVILNDSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMH 303
           MIV+LND++  SL  +     +  + ALS  L+R+Q+++  R+LRE+AKG+TK++   + 
Sbjct: 240 MIVVLNDNQQVSLPTQYNGKNQDPVGALSGALARLQANRPLRELREIAKGVTKQLPEPIQ 299

Query: 304 EWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVH 363
           E  AK+DEYARGMI   GSTLFEELGLYYIGP+DGHN+E LI++LQEV S  ++GPVL+H
Sbjct: 300 EATAKIDEYARGMISGSGSTLFEELGLYYIGPIDGHNLELLITMLQEVKSTETVGPVLIH 359

Query: 364 VVTEENRRAED----TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDK 419
           ++TE+    E     + K   + K  + A+   S P    S +Y + F +AL+ EAE D 
Sbjct: 360 IITEKGHGYEPAVLASDKMHGVAKY-DIATGKQSKPKAK-SGSYTNYFADALIAEAELDS 417

Query: 420 DIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQ 479
            +V +HA M     +  F++++PER FDVG+AEQHAVTF+AGLA  G+ P C I S+FLQ
Sbjct: 418 RVVGIHAAMGGGTGMNRFEQRYPERTFDVGIAEQHAVTFAAGLAAEGMIPMCAIYSSFLQ 477

Query: 480 RAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDEL 539
           R YDQ+V+DV  Q+LPVRF +  AGLVG+DG T  G  D+T+M  LPNMI+MAPS+E EL
Sbjct: 478 RGYDQIVHDVALQKLPVRFAMDRAGLVGADGATHSGFADVTYMGVLPNMIIMAPSNEAEL 537

Query: 540 VDMVATVASIDDRPVCFRYPRGAIVRTDLPGY------RGIPIEIGKGKVLVEGKDVALL 593
            + VAT  +IDD+P C R+PRG  +  D   Y      +G P +IGKG V   GKDVAL+
Sbjct: 538 CNAVATSVAIDDQPSCLRFPRGNGLGVDFAAYGVSEKLKGTPWQIGKGVVRKGGKDVALV 597

Query: 594 GYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGF 653
            YG M  N L A  +L K G+  TVAD RFCKPLD+ L+R++ + H  +ITVEE  IGGF
Sbjct: 598 CYGTMTNNGLAAAEMLEKSGVTATVADMRFCKPLDMPLLRQMAREHPVMITVEENGIGGF 657

Query: 654 GSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRT 713
           GSHV H +AL+GLLD  +K+RP+ LPD +IEH S T QLA AGL+  HIAATAL+LLGR 
Sbjct: 658 GSHVMHNLALEGLLDGNLKFRPMTLPDRFIEHGSQTDQLAEAGLSASHIAATALTLLGRK 717

Query: 714 REALLLM 720
           ++++ L+
Sbjct: 718 KDSVALL 724


>gi|21593831|gb|AAM65798.1| 1-D-deoxyxylulose 5-phosphate synthase, putative [Arabidopsis
           thaliana]
          Length = 628

 Score =  686 bits (1770), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 351/647 (54%), Positives = 450/647 (69%), Gaps = 55/647 (8%)

Query: 41  SRINLCPS-----SSSITSSKLVTVSRICALPDIDDFFWDKEPTPILDLVENPLRLKSLT 95
           S IN  PS      SS++S+K   V R     +  +++ ++ PTP+LD + +P+ +K+L+
Sbjct: 10  SYINRNPSLKYLKPSSMSSTKYSKV-RATTFSEKGEYYSNRPPTPLLDTINHPMHMKNLS 68

Query: 96  IKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYA 155
           IKELK L+ E+RS++   VSKT   L S+L  VELTVALH++F+ P DKILWDVG Q+Y 
Sbjct: 69  IKELKVLSDELRSDVIFNVSKTGGHLGSNLGVVELTVALHYIFNTPHDKILWDVGHQSYP 128

Query: 156 HKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRE 215
           HKILTGRR  + T+R+ +G+SGYT R ESE+D F  GH   ++SAGLGMAV RD+KG   
Sbjct: 129 HKILTGRRGKMKTIRQTNGLSGYTKRRESEHDSFGTGHSSTTLSAGLGMAVGRDLKGMNN 188

Query: 216 CIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKIE-ESPKTSINALSST 274
            +V+VI +G   AGQAYEAM+NAGYL SNMIVILND++    P    + P   + ALS  
Sbjct: 189 SVVSVIGDGAMTAGQAYEAMNNAGYLHSNMIVILNDNKQVSLPTANLDGPTQPVGALSCA 248

Query: 275 LSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIG 334
           LSR+QS+                                RGMI    STLFEELG +Y+G
Sbjct: 249 LSRLQSN--------------------------------RGMIRETSSTLFEELGFHYVG 276

Query: 335 PVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR------RAEDTQKSEAIEKQQEGA 388
           PVDGHNI+DL+S+L+ + S  ++GPVL+HVVTE+ R      RA+D  K   ++   E  
Sbjct: 277 PVDGHNIDDLVSILETLKSTKTIGPVLIHVVTEKGRGYPYAERADD--KYHVLKFDPETG 334

Query: 389 SDSNSLPFGNYSRT--YDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYF 446
                  F N S+T  Y  CF+EAL+ EAE DKDIV +HA M     L LF+ +FP R F
Sbjct: 335 KQ-----FKNISKTQSYTSCFVEALIAEAEADKDIVAIHAAMGGGTMLNLFESRFPTRCF 389

Query: 447 DVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLV 506
           DVG+AEQHAVTF+AGLAC GLKPFC I S+F+QRAYDQVV+DVD Q+LPVRF I  AGL+
Sbjct: 390 DVGIAEQHAVTFAAGLACEGLKPFCTIYSSFMQRAYDQVVHDVDLQKLPVRFAIDRAGLM 449

Query: 507 GSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYPRGAIVRT 566
           G+DGPT CGAFD+TFM+CLPNMIVMAPSDE EL +MVAT A+IDDRP CFRY RG  +  
Sbjct: 450 GADGPTHCGAFDVTFMACLPNMIVMAPSDEAELFNMVATAAAIDDRPSCFRYHRGNGIGV 509

Query: 567 DL-PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCK 625
            L PG +G+P++IG+G++L +G+ VALLGYG+ VQ CL+A ++LS+ G+ +TVADARFCK
Sbjct: 510 SLPPGNKGVPLQIGRGRILRDGERVALLGYGSAVQRCLEAASMLSERGLKITVADARFCK 569

Query: 626 PLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 672
           PLD+ L+R L ++H  LITVEEGSIGGFGSHV  F+ALDGLLD  +K
Sbjct: 570 PLDVALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGKLK 616


>gi|186510292|ref|NP_566686.2| 1-deoxy-D-xylulose 5-phosphate synthase 1 [Arabidopsis thaliana]
 gi|332642996|gb|AEE76517.1| 1-deoxy-D-xylulose 5-phosphate synthase 1 [Arabidopsis thaliana]
          Length = 640

 Score =  683 bits (1763), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 350/647 (54%), Positives = 449/647 (69%), Gaps = 55/647 (8%)

Query: 41  SRINLCPS-----SSSITSSKLVTVSRICALPDIDDFFWDKEPTPILDLVENPLRLKSLT 95
           S IN  PS      SS++S+K   V R     +  +++ ++ PTP+LD + +P+ +K+L+
Sbjct: 22  SYINRNPSLKYLKPSSMSSTKYSKV-RATTFSEKGEYYSNRPPTPLLDTINHPMHMKNLS 80

Query: 96  IKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYA 155
           IKELK L+ E+RS++   VSKT   L S+L  VELTVALH++F+ P DKILWDVG Q+Y 
Sbjct: 81  IKELKVLSDELRSDVIFNVSKTGGHLGSNLGVVELTVALHYIFNTPHDKILWDVGHQSYP 140

Query: 156 HKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRE 215
           HKILTGRR  + T+R+ +G+SGYT R ESE+D F  GH   ++SAGLGMAV RD+KG   
Sbjct: 141 HKILTGRRGKMKTIRQTNGLSGYTKRRESEHDSFGTGHSSTTLSAGLGMAVGRDLKGMNN 200

Query: 216 CIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKIE-ESPKTSINALSST 274
            +V+VI +G   AGQAYEAM+NAGYL SNMIVILND++    P    + P   + ALS  
Sbjct: 201 SVVSVIGDGAMTAGQAYEAMNNAGYLHSNMIVILNDNKQVSLPTANLDGPTQPVGALSCA 260

Query: 275 LSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIG 334
           LSR+QS+                                 GMI    STLFEELG +Y+G
Sbjct: 261 LSRLQSNC--------------------------------GMIRETSSTLFEELGFHYVG 288

Query: 335 PVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR------RAEDTQKSEAIEKQQEGA 388
           PVDGHNI+DL+S+L+ + S  ++GPVL+HVVTE+ R      RA+D  K   ++   E  
Sbjct: 289 PVDGHNIDDLVSILETLKSTKTIGPVLIHVVTEKGRGYPYAERADD--KYHVLKFDPETG 346

Query: 389 SDSNSLPFGNYSRT--YDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYF 446
                  F N S+T  Y  CF+EAL+ EAE DKDIV +HA M     L LF+ +FP R F
Sbjct: 347 KQ-----FKNISKTQSYTSCFVEALIAEAEADKDIVAIHAAMGGGTMLNLFESRFPTRCF 401

Query: 447 DVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLV 506
           DVG+AEQHAVTF+AGLAC GLKPFC I S+F+QRAYDQVV+DVD Q+LPVRF I  AGL+
Sbjct: 402 DVGIAEQHAVTFAAGLACEGLKPFCTIYSSFMQRAYDQVVHDVDLQKLPVRFAIDRAGLM 461

Query: 507 GSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYPRGAIVRT 566
           G+DGPT CGAFD+TFM+CLPNMIVMAPSDE EL +MVAT A+IDDRP CFRY RG  +  
Sbjct: 462 GADGPTHCGAFDVTFMACLPNMIVMAPSDEAELFNMVATAAAIDDRPSCFRYHRGNGIGV 521

Query: 567 DL-PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCK 625
            L PG +G+P++IG+G++L +G+ VALLGYG+ VQ CL+A ++LS+ G+ +TVADARFCK
Sbjct: 522 SLPPGNKGVPLQIGRGRILRDGERVALLGYGSAVQRCLEAASMLSERGLKITVADARFCK 581

Query: 626 PLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 672
           PLD+ L+R L ++H  LITVEEGSIGGFGSHV  F+ALDGLLD  +K
Sbjct: 582 PLDVALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGKLK 628


>gi|186510290|ref|NP_850620.2| 1-deoxy-D-xylulose 5-phosphate synthase 1 [Arabidopsis thaliana]
 gi|332642995|gb|AEE76516.1| 1-deoxy-D-xylulose 5-phosphate synthase 1 [Arabidopsis thaliana]
          Length = 641

 Score =  682 bits (1761), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 349/647 (53%), Positives = 447/647 (69%), Gaps = 54/647 (8%)

Query: 41  SRINLCPS-----SSSITSSKLVTVSRICALPDIDDFFWDKEPTPILDLVENPLRLKSLT 95
           S IN  PS      SS++S+K   V R     +  +++ ++ PTP+LD + +P+ +K+L+
Sbjct: 22  SYINRNPSLKYLKPSSMSSTKYSKV-RATTFSEKGEYYSNRPPTPLLDTINHPMHMKNLS 80

Query: 96  IKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYA 155
           IKELK L+ E+RS++   VSKT   L S+L  VELTVALH++F+ P DKILWDVG Q+Y 
Sbjct: 81  IKELKVLSDELRSDVIFNVSKTGGHLGSNLGVVELTVALHYIFNTPHDKILWDVGHQSYP 140

Query: 156 HKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRE 215
           HKILTGRR  + T+R+ +G+SGYT R ESE+D F  GH   ++SAGLGMAV RD+KG   
Sbjct: 141 HKILTGRRGKMKTIRQTNGLSGYTKRRESEHDSFGTGHSSTTLSAGLGMAVGRDLKGMNN 200

Query: 216 CIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKIE-ESPKTSINALSST 274
            +V+VI +G   AGQAYEAM+NAGYL SNMIVILND++    P    + P   + ALS  
Sbjct: 201 SVVSVIGDGAMTAGQAYEAMNNAGYLHSNMIVILNDNKQVSLPTANLDGPTQPVGALSCA 260

Query: 275 LSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIG 334
           LSR+QS+                                 GMI    STLFEELG +Y+G
Sbjct: 261 LSRLQSNC--------------------------------GMIRETSSTLFEELGFHYVG 288

Query: 335 PVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR------RAEDTQKSEAIEKQQEGA 388
           PVDGHNI+DL+S+L+ + S  ++GPVL+HVVTE+ R      RA+D          + G 
Sbjct: 289 PVDGHNIDDLVSILETLKSTKTIGPVLIHVVTEKGRGYPYAERADDKYHGVLKFDPETGK 348

Query: 389 SDSNSLPFGNYSRT--YDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYF 446
                  F N S+T  Y  CF+EAL+ EAE DKDIV +HA M     L LF+ +FP R F
Sbjct: 349 Q------FKNISKTQSYTSCFVEALIAEAEADKDIVAIHAAMGGGTMLNLFESRFPTRCF 402

Query: 447 DVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLV 506
           DVG+AEQHAVTF+AGLAC GLKPFC I S+F+QRAYDQVV+DVD Q+LPVRF I  AGL+
Sbjct: 403 DVGIAEQHAVTFAAGLACEGLKPFCTIYSSFMQRAYDQVVHDVDLQKLPVRFAIDRAGLM 462

Query: 507 GSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYPRGAIVRT 566
           G+DGPT CGAFD+TFM+CLPNMIVMAPSDE EL +MVAT A+IDDRP CFRY RG  +  
Sbjct: 463 GADGPTHCGAFDVTFMACLPNMIVMAPSDEAELFNMVATAAAIDDRPSCFRYHRGNGIGV 522

Query: 567 DL-PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCK 625
            L PG +G+P++IG+G++L +G+ VALLGYG+ VQ CL+A ++LS+ G+ +TVADARFCK
Sbjct: 523 SLPPGNKGVPLQIGRGRILRDGERVALLGYGSAVQRCLEAASMLSERGLKITVADARFCK 582

Query: 626 PLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 672
           PLD+ L+R L ++H  LITVEEGSIGGFGSHV  F+ALDGLLD  +K
Sbjct: 583 PLDVALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGKLK 629


>gi|209529759|gb|ACI49774.1| At3g21500 [Arabidopsis thaliana]
          Length = 629

 Score =  682 bits (1761), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 349/647 (53%), Positives = 447/647 (69%), Gaps = 54/647 (8%)

Query: 41  SRINLCPS-----SSSITSSKLVTVSRICALPDIDDFFWDKEPTPILDLVENPLRLKSLT 95
           S IN  PS      SS++S+K   V R     +  +++ ++ PTP+LD + +P+ +K+L+
Sbjct: 10  SYINRNPSLKYLKPSSMSSTKYSKV-RATTFSEKGEYYSNRPPTPLLDTINHPMHMKNLS 68

Query: 96  IKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYA 155
           IKELK L+ E+RS++   VSKT   L S+L  VELTVALH++F+ P DKILWDVG Q+Y 
Sbjct: 69  IKELKVLSDELRSDVIFNVSKTGGHLGSNLGVVELTVALHYIFNTPHDKILWDVGHQSYP 128

Query: 156 HKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRE 215
           HKILTGRR  + T+R+ +G+SGYT R ESE+D F  GH   ++SAGLGMAV RD+KG   
Sbjct: 129 HKILTGRRGKMKTIRQTNGLSGYTKRRESEHDSFGTGHSSTTLSAGLGMAVGRDLKGMNN 188

Query: 216 CIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKIE-ESPKTSINALSST 274
            +V+VI +G   AGQAYEAM+NAGYL SNMIVILND++    P    + P   + ALS  
Sbjct: 189 SVVSVIGDGAMTAGQAYEAMNNAGYLHSNMIVILNDNKQVSLPTANLDGPTQPVGALSCA 248

Query: 275 LSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIG 334
           LSR+QS+                                 GMI    STLFEELG +Y+G
Sbjct: 249 LSRLQSNC--------------------------------GMIRETSSTLFEELGFHYVG 276

Query: 335 PVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR------RAEDTQKSEAIEKQQEGA 388
           PVDGHNI+DL+S+L+ + S  ++GPVL+HVVTE+ R      RA+D          + G 
Sbjct: 277 PVDGHNIDDLVSILETLKSTKTIGPVLIHVVTEKGRGYPYAERADDKYHGVLKFDPETGK 336

Query: 389 SDSNSLPFGNYSRT--YDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYF 446
                  F N S+T  Y  CF+EAL+ EAE DKDIV +HA M     L LF+ +FP R F
Sbjct: 337 Q------FKNISKTQSYTSCFVEALIAEAEADKDIVAIHAAMGGGTMLNLFESRFPTRCF 390

Query: 447 DVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLV 506
           DVG+AEQHAVTF+AGLAC GLKPFC I S+F+QRAYDQVV+DVD Q+LPVRF I  AGL+
Sbjct: 391 DVGIAEQHAVTFAAGLACEGLKPFCTIYSSFMQRAYDQVVHDVDLQKLPVRFAIDRAGLM 450

Query: 507 GSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYPRGAIVRT 566
           G+DGPT CGAFD+TFM+CLPNMIVMAPSDE EL +MVAT A+IDDRP CFRY RG  +  
Sbjct: 451 GADGPTHCGAFDVTFMACLPNMIVMAPSDEAELFNMVATAAAIDDRPSCFRYHRGNGIGV 510

Query: 567 DL-PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCK 625
            L PG +G+P++IG+G++L +G+ VALLGYG+ VQ CL+A ++LS+ G+ +TVADARFCK
Sbjct: 511 SLPPGNKGVPLQIGRGRILRDGERVALLGYGSAVQRCLEAASMLSERGLKITVADARFCK 570

Query: 626 PLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 672
           PLD+ L+R L ++H  LITVEEGSIGGFGSHV  F+ALDGLLD  +K
Sbjct: 571 PLDVALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGKLK 617


>gi|51970458|dbj|BAD43921.1| putative 1-D-deoxyxylulose 5-phosphate synthase [Arabidopsis
           thaliana]
          Length = 629

 Score =  682 bits (1759), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 349/647 (53%), Positives = 447/647 (69%), Gaps = 54/647 (8%)

Query: 41  SRINLCPS-----SSSITSSKLVTVSRICALPDIDDFFWDKEPTPILDLVENPLRLKSLT 95
           S IN  PS      SS++S+K   V R     +  +++ ++ PTP+LD + +P+ +K+L+
Sbjct: 10  SYINRNPSLKYLKPSSMSSTKYSKV-RATTFSEKGEYYSNRPPTPLLDTINHPMHMKNLS 68

Query: 96  IKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYA 155
           IKELK L+ E+RS++   VSKT   L S+L  VELTVALH++F+ P DKILWDVG Q+Y 
Sbjct: 69  IKELKVLSDELRSDVIFNVSKTGGHLGSNLGVVELTVALHYIFNTPHDKILWDVGHQSYP 128

Query: 156 HKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRE 215
           HKILTGRR  + T+R+ +G+SGYT R ESE+D F  GH   ++SAGLGMAV RD+KG   
Sbjct: 129 HKILTGRRGKMKTIRQTNGLSGYTKRRESEHDSFGTGHSSTTLSAGLGMAVGRDLKGMNN 188

Query: 216 CIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKIE-ESPKTSINALSST 274
            +V+VI +G   AGQAYEAM+NAGYL SNMIVILND++    P    + P   + ALS  
Sbjct: 189 SVVSVIGDGAMTAGQAYEAMNNAGYLHSNMIVILNDNKQVSLPTANLDGPTQPVGALSCA 248

Query: 275 LSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIG 334
           LSR+QS+                                 GMI    STLFEELG +Y+G
Sbjct: 249 LSRLQSNC--------------------------------GMIRETSSTLFEELGFHYVG 276

Query: 335 PVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR------RAEDTQKSEAIEKQQEGA 388
           PVDGHNI+DL+S+L+ + S  ++GPVL+HVVTE+ R      RA+D          + G 
Sbjct: 277 PVDGHNIDDLVSILETLKSTKTIGPVLIHVVTEKGRGYPYAERADDKYHGVLKFDPETGK 336

Query: 389 SDSNSLPFGNYSRT--YDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYF 446
                  F N S+T  Y  CF+EAL+ EAE DKDIV +HA M     L LF+ +FP R F
Sbjct: 337 Q------FKNISKTQSYTSCFVEALIAEAEADKDIVAIHAAMGGGTMLNLFESRFPTRCF 390

Query: 447 DVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLV 506
           DVG+AEQHAVTF+AGLAC GLKPFC I S+F+QRAYDQVV+DVD Q+LPVRF I  AGL+
Sbjct: 391 DVGIAEQHAVTFAAGLACEGLKPFCTIYSSFMQRAYDQVVHDVDLQKLPVRFAIDRAGLM 450

Query: 507 GSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYPRGAIVRT 566
           G+DGPT CGAFD+TFM+CLPNMIVMAPSDE EL +MVAT A+IDDRP CFRY RG  +  
Sbjct: 451 GADGPTHCGAFDMTFMACLPNMIVMAPSDEAELFNMVATAAAIDDRPSCFRYHRGNGIGV 510

Query: 567 DL-PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCK 625
            L PG +G+P++IG+G++L +G+ VALLGYG+ VQ CL+A ++LS+ G+ +TVADARFCK
Sbjct: 511 SLPPGNKGVPLQIGRGRILRDGERVALLGYGSAVQRCLEAASMLSERGLKITVADARFCK 570

Query: 626 PLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 672
           PLD+ L+R L ++H  LITVEEGSIGGFGSHV  F+ALDGLLD  +K
Sbjct: 571 PLDVALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGKLK 617


>gi|51969370|dbj|BAD43377.1| putative 1-D-deoxyxylulose 5-phosphate synthase [Arabidopsis
           thaliana]
          Length = 629

 Score =  681 bits (1758), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 349/647 (53%), Positives = 446/647 (68%), Gaps = 54/647 (8%)

Query: 41  SRINLCPS-----SSSITSSKLVTVSRICALPDIDDFFWDKEPTPILDLVENPLRLKSLT 95
           S IN  PS      SS++S+K   V R     +  +++ ++ PTP+LD + +P+ +K+L+
Sbjct: 10  SYINRNPSLKYLKPSSMSSTKYSKV-RATTFSEKGEYYSNRPPTPLLDTINHPMHMKNLS 68

Query: 96  IKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYA 155
           IKELK L+ E+RS++   VSKT   L S+L  VELTVALH++F+ P DKILWDVG Q+Y 
Sbjct: 69  IKELKVLSDELRSDVIFNVSKTGGHLGSNLGVVELTVALHYIFNTPHDKILWDVGHQSYP 128

Query: 156 HKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRE 215
           HKILTGRR  + T+R+ +G+SGYT R ESE+D F  GH   ++SAGLGMAV RD+KG   
Sbjct: 129 HKILTGRRGKMKTIRQTNGLSGYTKRRESEHDSFGTGHSSTTLSAGLGMAVGRDLKGMNN 188

Query: 216 CIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKIE-ESPKTSINALSST 274
            +V+VI +G   AGQAYEAM+NAGYL SNMIVILND++    P    + P   + ALS  
Sbjct: 189 SVVSVIGDGAMTAGQAYEAMNNAGYLHSNMIVILNDNKQVSLPTANLDGPTQPVGALSCA 248

Query: 275 LSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIG 334
           LSR+QS+                                 GMI    STLFEELG +Y+G
Sbjct: 249 LSRLQSNC--------------------------------GMIRETSSTLFEELGFHYVG 276

Query: 335 PVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR------RAEDTQKSEAIEKQQEGA 388
           PVDGHNI+DL+S+L+ + S  ++GPVL+HVVTE+ R      RA+D          + G 
Sbjct: 277 PVDGHNIDDLVSILETLKSTKTIGPVLIHVVTEKGRGYPYAERADDKYHGVLKFDPETGK 336

Query: 389 SDSNSLPFGNYSRT--YDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYF 446
                  F N S+T  Y  CF+EAL+ EAE DKDIV +HA M     L LF+ +FP R F
Sbjct: 337 Q------FKNISKTQSYTSCFVEALIAEAEADKDIVAIHAAMGGGTMLNLFESRFPTRCF 390

Query: 447 DVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLV 506
           DVG+AEQHAVTF+AGLAC GLKPFC I S+F+QRAYDQVV+DVD Q LPVRF I  AGL+
Sbjct: 391 DVGIAEQHAVTFAAGLACEGLKPFCTIYSSFMQRAYDQVVHDVDLQELPVRFAIDRAGLM 450

Query: 507 GSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYPRGAIVRT 566
           G+DGPT CGAFD+TFM+CLPNMIVMAPSDE EL +MVAT A+IDDRP CFRY RG  +  
Sbjct: 451 GADGPTHCGAFDVTFMACLPNMIVMAPSDEAELFNMVATAAAIDDRPSCFRYHRGNGIGV 510

Query: 567 DL-PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCK 625
            L PG +G+P++IG+G++L +G+ VALLGYG+ VQ CL+A ++LS+ G+ +TVADARFCK
Sbjct: 511 SLPPGNKGVPLQIGRGRILRDGERVALLGYGSAVQRCLEAASMLSERGLKITVADARFCK 570

Query: 626 PLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 672
           PLD+ L+R L ++H  LITVEEGSIGGFGSHV  F+ALDGLLD  +K
Sbjct: 571 PLDVALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGKLK 617


>gi|40317612|gb|AAP14354.2| 1-deoxy-D-xylulose-5-phosphate synthase [Andrographis paniculata]
          Length = 585

 Score =  659 bits (1700), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 312/572 (54%), Positives = 415/572 (72%), Gaps = 10/572 (1%)

Query: 146 LWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMA 205
           +WDVG Q Y HKILTGRR  +HT+R+  G++G+  R ES YD F AGH   S+SA LGMA
Sbjct: 1   IWDVGHQAYPHKILTGRRPRMHTIRQGFGLAGFPKRDESPYDAFGAGHSSTSISAALGMA 60

Query: 206 VARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH-SLHPKIEESP 264
           V RD+ GK   +++VI +G   AGQAYEAM+NAG+LDSN+I++LND+   SL     + P
Sbjct: 61  VGRDLLGKSNHVISVIGDGAMTAGQAYEAMNNAGFLDSNLIIVLNDNNQVSLPTATVDGP 120

Query: 265 KTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQGSTL 324
              + ALS  L+R+Q+S+ FR LRE AK MTK++G  +HE AAKVD Y RGM GP  +TL
Sbjct: 121 APPVGALSEALTRLQASRKFRLLREAAKSMTKQMGEHVHETAAKVDTYVRGMAGPPRATL 180

Query: 325 FEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSEAIEKQ 384
           FEELGLYYIGPVDGH+IEDL+ +L++V  + + GPVL+H++TE+ +       +EA   +
Sbjct: 181 FEELGLYYIGPVDGHSIEDLVHILKKVKEMPAPGPVLIHILTEKGK---GYSPAEAAADK 237

Query: 385 QEGA-----SDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQE 439
             G               + +++Y   F E+LV EA++D  IV +HA M     L +FQ+
Sbjct: 238 MHGVVKFDVRTGKQAKSKSKTKSYTQYFAESLVAEAKQDDKIVAIHAAMGGGTGLNIFQK 297

Query: 440 KFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFV 499
           +FP+R FDVG+AEQHAVTF+AGLA  GLKPFC I S+FLQR YDQVV+DVD Q+LPVRF+
Sbjct: 298 QFPDRCFDVGIAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFI 357

Query: 500 ITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYP 559
           +  AGLVG+DGPT CGAFD T+M+CLPNM+VMAPSDE EL+ M+AT A+IDD+P   RYP
Sbjct: 358 MDRAGLVGADGPTHCGAFDTTYMACLPNMVVMAPSDEAELMHMIATAATIDDQPSSIRYP 417

Query: 560 RGAIVRTDLPG-YRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTV 618
           RG  +  DLP   +G P++IGKG++L EG  VA++G+GA+VQNC+ A A+L + G+ VTV
Sbjct: 418 RGNGIGADLPADNKGTPLQIGKGRILREGSRVAIMGFGAVVQNCMAAAAILDQHGVHVTV 477

Query: 619 ADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWRPIVL 678
           ADARFCKPLD  L+R+L + H  L+TVEEGS+GGF SHV+ F++L+G LD  +KWRP+VL
Sbjct: 478 ADARFCKPLDGGLIRQLAKEHEVLVTVEEGSVGGFSSHVAQFLSLNGFLDGKLKWRPMVL 537

Query: 679 PDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
           PD YI+H +   Q+  AGL+  HIA T ++++
Sbjct: 538 PDRYIDHGAQVDQIEEAGLSPKHIACTVMAMV 569


>gi|171850410|gb|ACB55417.1| 1-deoxy-D-xylulose 5-phosphate synthase [Picrorhiza kurrooa]
          Length = 687

 Score =  653 bits (1685), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/663 (50%), Positives = 442/663 (66%), Gaps = 32/663 (4%)

Query: 71  DFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVEL 130
           +F  +K  TP+LD +  P  +K+L++            E+  +VSKT   L SSL   EL
Sbjct: 42  NFSGEKPWTPLLDTINCPAHMKNLSV------------EIVYVVSKTGGHLSSSLGVTEL 89

Query: 131 TVALHHVFHAPVDKILWDVG----EQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEY 186
           TVALHH F+ P DKI+WDVG    +Q Y HKILTGRRS + T+R+  G++G+  R ES +
Sbjct: 90  TVALHHEFNTPEDKIIWDVGHQVTQQAYMHKILTGRRSKMSTIRQTFGLAGFPKREESAH 149

Query: 187 DPFNAGHGCNSVSAGLG-MAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNM 245
           D F  GH   S+SA LG MAV RD+ GK   +++VI +G   AGQAYEAM+NAG+LDSN+
Sbjct: 150 DAFGVGHSSTSISAALGGMAVGRDLLGKDNHVISVIGDGAMTAGQAYEAMNNAGFLDSNL 209

Query: 246 IVILNDSRH--SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMH 303
           I++LN+     SL     + P   + AL+  L+++Q   SFRQL E AKG+ K++G    
Sbjct: 210 IIVLNEQTKQVSLPTATIDGPAPPVGALTKALTKLQLGTSFRQLPEAAKGIAKQVGG--- 266

Query: 304 EWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVH 363
           E AAK+D +A G++G  G++LFEELG+YYIGP DGH+I   +   +++  + + GPV+VH
Sbjct: 267 EGAAKLDTFASGLMGSPGASLFEELGIYYIGPGDGHSINYFVYFFKQIKEMPAPGPVMVH 326

Query: 364 VVTEENRRAEDTQKSEAIEKQQEGA-----SDSNSLPFGNYSRTYDDCFIEALVMEAEKD 418
           +VTE   + + +  +EA   +  G      S    +     + +Y   F E+L+ +A  +
Sbjct: 327 IVTE---KGKGSPPAEAAANKMRGVVKFEPSTGKQIKSKPKTLSYTQYFAESLIAKAAVN 383

Query: 419 KDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFL 478
           K IV VHA M     L  FQ+ FPER FDVG+A+QHAVTF+AGLA  GLKPFC I S+FL
Sbjct: 384 KKIVAVHAAMGGGTGLNFFQKHFPERCFDVGIAKQHAVTFAAGLATEGLKPFCAIYSSFL 443

Query: 479 QRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDE 538
           QR YDQVV+DVD Q+LPVRF++  AGLVG+DGPT CGAFD TFM+CLPNM+VMAPSDE E
Sbjct: 444 QRGYDQVVHDVDLQKLPVRFLMDRAGLVGADGPTHCGAFDTTFMACLPNMVVMAPSDEAE 503

Query: 539 LVDMVATVASIDDRPVCFRYPRGAIVRTDLP-GYRGIPIEIGKGKVLVEGKDVALLGYGA 597
           L+ M+AT A IDDRP C RYPRG  V   LP   +G P+E+GKG++L EG  VA+LG+G 
Sbjct: 504 LMHMIATAAKIDDRPSCIRYPRGNGVGAILPKNNKGTPLEVGKGRILREGSRVAILGFGT 563

Query: 598 MVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHV 657
           +VQ CL A  LL   G+DVTVADARFCKPLD +L+R+L + H  LIT+E+G  GGF SHV
Sbjct: 564 IVQTCLAASQLLQDQGVDVTVADARFCKPLDGELIRQLAKEHEVLITIEDGQFGGFSSHV 623

Query: 658 SHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREAL 717
            HF+ L     + +KWR + LPD YIEH S   Q+  AGL+  HIAAT LSL+G  +++L
Sbjct: 624 GHFLCLTDTRRN-LKWRAMGLPDRYIEHGSQDDQIEEAGLSSRHIAATVLSLIGDGKDSL 682

Query: 718 LLM 720
            LM
Sbjct: 683 HLM 685


>gi|163797802|ref|ZP_02191748.1| deoxyxylulose-5-phosphate synthase [alpha proteobacterium BAL199]
 gi|159176924|gb|EDP61490.1| deoxyxylulose-5-phosphate synthase [alpha proteobacterium BAL199]
          Length = 638

 Score =  649 bits (1675), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 336/641 (52%), Positives = 428/641 (66%), Gaps = 15/641 (2%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V  P  LK L +  LKQ+A E+R+E    VS T   L + L  VELTVALHHVF
Sbjct: 6   TPLLDTVRIPSDLKGLGVDALKQVADELRTETIDAVSMTGGHLGAGLGVVELTVALHHVF 65

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
            AP DKI+WDVG Q Y HKILT RR  I TLR+  G+SG+T RSESEYDPF A H   S+
Sbjct: 66  DAPNDKIIWDVGHQAYPHKILTDRRDRIRTLRQGGGLSGFTRRSESEYDPFGAAHSSTSI 125

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVARD+KG+R  +V VI +G   AG AYEAM+NAG +DS +IVILND+  S+ P
Sbjct: 126 SAGLGMAVARDLKGERFNVVAVIGDGAMSAGMAYEAMNNAGSMDSRLIVILNDNDMSIAP 185

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                    + A+S+ LS+I SS+S+R LR +AK + + + + +   A + +E+ARGM+ 
Sbjct: 186 P--------VGAMSAYLSQIVSSRSYRSLRHMAKQVAQHLPKAIERTAKRAEEFARGMV- 236

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRR---AEDT 375
             G TLFEELG  Y+GPVDGHN++ L+ VL+ +      GPVL+HVVTE+ R    AE +
Sbjct: 237 -TGGTLFEELGFLYVGPVDGHNLDHLLPVLKNLRDTPGHGPVLLHVVTEKGRGHPFAETS 295

Query: 376 QKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQ 435
                   + +  + + + P  N + +Y + F ++L+ EAE D  +V + A M     L 
Sbjct: 296 ADKYHAVAKFDVVTGTQAKPKAN-APSYTNVFADSLIAEAEADDRVVAITAAMPTGTGLD 354

Query: 436 LFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLP 495
            F+++FPER FDVG+AEQHAVTF+AGLA  G+KPF  I S FLQR YDQVV+DV  Q LP
Sbjct: 355 RFEKRFPERLFDVGIAEQHAVTFAAGLAAEGMKPFAAIYSTFLQRGYDQVVHDVAIQSLP 414

Query: 496 VRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVC 555
           VRF I  AGLVG+DG T  G+FD+ ++ CLP  ++MAPSDE ELV MVAT A+IDDRP  
Sbjct: 415 VRFAIDRAGLVGADGATHAGSFDLAYLGCLPGFVIMAPSDEAELVHMVATAAAIDDRPSA 474

Query: 556 FRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGID 615
            RYPRG  V  +LP  RG P+EIG+G+V+ EG  VALL  G  +Q CL A   L+  G+ 
Sbjct: 475 VRYPRGEGVGVELPA-RGQPLEIGRGRVVREGTSVALLSLGGRLQECLSAADDLAARGLS 533

Query: 616 VTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWRP 675
            TVADARF KP+D  L+R L   H  LITVEEGSIGGF S V H++A +GLLD G+  RP
Sbjct: 534 TTVADARFAKPIDTALLRRLAAEHAVLITVEEGSIGGFSSQVLHYLATEGLLDRGLVVRP 593

Query: 676 IVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREA 716
           +VLPD +I+H  P  Q A AGL    I ATAL+ LG+  EA
Sbjct: 594 LVLPDRFIDHDKPEVQYAQAGLDAAGIVATALAALGKDAEA 634


>gi|407782057|ref|ZP_11129272.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oceanibaculum indicum P24]
 gi|407206530|gb|EKE76481.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oceanibaculum indicum P24]
          Length = 639

 Score =  644 bits (1661), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 330/647 (51%), Positives = 426/647 (65%), Gaps = 31/647 (4%)

Query: 78  PTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHV 137
           PTP+LD V  P  +K  +I +L  LA ++R E    VS+T   L + L  VELTVA+HHV
Sbjct: 5   PTPVLDKVTTPADMKDFSIDQLTALAGDLRRETIDAVSRTGGHLGAGLGVVELTVAIHHV 64

Query: 138 FHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNS 197
           F  P D+++WDVG Q Y HKILTGRR  I TLR+  G+SG+T RSESEYDPF A H   S
Sbjct: 65  FDTPRDRLIWDVGHQAYPHKILTGRRDRIRTLRQGGGLSGFTRRSESEYDPFGAAHSSTS 124

Query: 198 VSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLH 257
           +SAGLGMAVARD++G    ++ VI +G+  AG AYEAM+NAG +DS +IVILND+  S+ 
Sbjct: 125 ISAGLGMAVARDLQGGDNNVIAVIGDGSMSAGMAYEAMNNAGSMDSRLIVILNDNDMSIA 184

Query: 258 PKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMI 317
           P           A+S+ LSR+ +SKS+R LRE  K M  R  + +   A + +EYARGM+
Sbjct: 185 PP--------TGAMSNYLSRLIASKSYRGLREAMKQMASRFPKPLENAARRAEEYARGMV 236

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR----RAE 373
              G TLFEE+G  YIGPVDGH+I  L+ +L+ +      GPVL+HVVTE+ R      +
Sbjct: 237 --TGGTLFEEMGFLYIGPVDGHDISHLVPILKSLRDRPEAGPVLLHVVTEKGRGHPFSKD 294

Query: 374 DTQKSEAIEK-------QQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHA 426
             +K  A++K       Q +  +++ S         Y + F +AL+ EAE D+ IV + A
Sbjct: 295 SPEKYHAVQKFDLVTGAQVKAKANAPS---------YTNVFAQALIQEAEADERIVAITA 345

Query: 427 GMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVV 486
            M     L  F E+FP+R FDVG+AEQHAVTF+AGLA  G+KPF  I S FLQR YDQVV
Sbjct: 346 AMPGGTGLDKFAERFPDRSFDVGIAEQHAVTFAAGLATEGMKPFAAIYSTFLQRGYDQVV 405

Query: 487 NDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATV 546
           +DV  QRLPVRF I  AGLVG+DG T  G+FD+ ++ CLP+ ++MA +DE ELV MVAT 
Sbjct: 406 HDVAIQRLPVRFAIDRAGLVGADGATHAGSFDVAYLGCLPDFVLMAAADEAELVHMVATA 465

Query: 547 ASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
           A+IDDRP   RYPRG     +LP  RG P+EIGKG+V+ EG  VA+L YGA +Q CL A 
Sbjct: 466 AAIDDRPSAVRYPRGEGTGVELPA-RGQPLEIGKGRVMREGTAVAILSYGARLQECLAAA 524

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGL 666
             L+  G+  TVADARF KPLD  LV  L + H  LIT+EEGS+GGFGS V   +A  G+
Sbjct: 525 EELAGYGLSATVADARFAKPLDTGLVERLARGHEVLITIEEGSVGGFGSFVLQHLATSGM 584

Query: 667 LDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRT 713
           LD+G++ RP+VLPD +I+H SP +Q A AGL    I  TAL+ LGR+
Sbjct: 585 LDAGLRVRPMVLPDRFIDHDSPEKQYAEAGLNADGIVRTALAALGRS 631


>gi|374498909|gb|AEZ53173.1| 1-deoxy-D-xylulose 5-phosphate synthase [Rosa rugosa]
          Length = 523

 Score =  640 bits (1652), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 322/523 (61%), Positives = 396/523 (75%), Gaps = 8/523 (1%)

Query: 204 MAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKIE-E 262
           MAV RD+KGK   +V VI +G   AGQAYEAM+NAGYLDS+MI+ILND++    P    +
Sbjct: 1   MAVGRDLKGKNNHVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIIILNDNKQVSLPTANLD 60

Query: 263 SPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQGS 322
            P   + ALSS LS++QS++  R+LREVAKG+TK+IG  +HE AAKVDEYARGMI   GS
Sbjct: 61  GPIPPVGALSSALSKLQSNRPLRELREVAKGVTKQIGGSVHELAAKVDEYARGMISGSGS 120

Query: 323 TLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSEAIE 382
           TLFEELGLYYIGPVDGHN++DLI++LQEV +  + GPVL+H++TE+ R     +K  A +
Sbjct: 121 TLFEELGLYYIGPVDGHNVDDLIAILQEVKTTQTTGPVLIHLITEKGRGYPYAEK--AAD 178

Query: 383 KQQEGA----SDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQ 438
           K    A    +          +++Y   F EAL+ EAE DKDIV +HA M     + LF 
Sbjct: 179 KYHGVAKFDPATGKQFKANASTQSYTTYFAEALIAEAEADKDIVAIHAAMGGGTGMNLFL 238

Query: 439 EKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRF 498
            +FP R FDVG+AEQHAVTF+AGLAC GLKPFC I S+FLQRAYDQVV+DVD Q+LPVRF
Sbjct: 239 RRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFLQRAYDQVVHDVDLQKLPVRF 298

Query: 499 VITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRY 558
            +  AGLVG+DGPT CGAFD+TFM+CLPNM+VMAPSDE EL  MVAT A+IDDRP CFRY
Sbjct: 299 AMDRAGLVGADGPTHCGAFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRY 358

Query: 559 PRGAIVRTDLP-GYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVT 617
           PRG  V  +LP G +G P+E+GKG++L+EG+ VALLGYG+ VQ CL A  L+  LG+ +T
Sbjct: 359 PRGNGVGVELPTGNKGTPLEVGKGRILIEGERVALLGYGSAVQTCLAAATLVEPLGLRLT 418

Query: 618 VADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWRPIV 677
           VADARFCKPLD  LVR+L ++H FLITVEEGSIGGFGSHV  F+ALDGLLD  +KWRP+V
Sbjct: 419 VADARFCKPLDHALVRKLAKSHEFLITVEEGSIGGFGSHVVQFLALDGLLDGKLKWRPLV 478

Query: 678 LPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLLM 720
           LPD YI+H +P  QLA AGLT  H+AAT  ++LG+TREAL +M
Sbjct: 479 LPDRYIDHGAPADQLADAGLTPCHLAATVFNILGQTREALEVM 521


>gi|154251237|ref|YP_001412061.1| 1-deoxy-D-xylulose-5-phosphate synthase [Parvibaculum
           lavamentivorans DS-1]
 gi|154155187|gb|ABS62404.1| deoxyxylulose-5-phosphate synthase [Parvibaculum lavamentivorans
           DS-1]
          Length = 650

 Score =  636 bits (1640), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 327/646 (50%), Positives = 428/646 (66%), Gaps = 22/646 (3%)

Query: 76  KEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALH 135
           K PTP+LD V  P  L++L   +L+QLA E+R+E+   VS+T   L + L  VELTVALH
Sbjct: 5   KPPTPLLDRVTVPADLRALGEGDLRQLAEELRAEMVDAVSQTGGHLGAGLGVVELTVALH 64

Query: 136 HVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGC 195
           +VF+ P D+I+WDVG Q Y HKILTGRR  I TLR+ DG+SG+T R+ESEYDPF A H  
Sbjct: 65  YVFNTPEDRIIWDVGHQAYPHKILTGRRDRIRTLRQGDGLSGFTKRAESEYDPFGAAHSS 124

Query: 196 NSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHS 255
            S+S+GLGMAVARD+KG    +V VI +G   AG AYEAM+NAG ++S +I+ILND+  S
Sbjct: 125 TSISSGLGMAVARDLKGGTNNVVAVIGDGAMSAGMAYEAMNNAGSMNSRLIIILNDNDMS 184

Query: 256 LHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARG 315
           + P         + A+S+ L+R+ S  ++R +R +AK + + + + + E A + +EYARG
Sbjct: 185 IAP--------PVGAMSAYLARLLSGGAYRSMRHLAKQLAQLLPKRLEESARRAEEYARG 236

Query: 316 MIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDT 375
           M    G TLFEELGLYY+GP+DGHN + L+ VL+ V   G  GP+LVHVVT++ +     
Sbjct: 237 MA--TGGTLFEELGLYYVGPIDGHNFDHLLPVLKNVRDAGE-GPILVHVVTQKGK---GY 290

Query: 376 QKSEAIEKQQEGASDSNSLPFGNYSR------TYDDCFIEALVMEAEKDKDIVVVHAGME 429
             +EA E +  G S  + +  G  ++      +Y   F E+L+  AE+D  IV + A M 
Sbjct: 291 APAEAAEDKYHGVSKFDVVT-GTQAKAQANAPSYTKVFAESLIAHAEEDDKIVAITAAMP 349

Query: 430 MDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDV 489
               L LF ++FP R FDVG+AEQHAVTF+AGLA  G KPF  I S FLQRAYDQVV+DV
Sbjct: 350 GGTGLDLFAQRFPGRTFDVGIAEQHAVTFAAGLATEGFKPFATIYSTFLQRAYDQVVHDV 409

Query: 490 DQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASI 549
             QRLPVRF I  AGLVG+DGPT  G+FD+T+++CLP  +VMA +DE EL  MVAT  +I
Sbjct: 410 AIQRLPVRFAIDRAGLVGADGPTHAGSFDVTYLACLPGFVVMAAADEVELKHMVATAVAI 469

Query: 550 DDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALL 609
           DDRP   RYPRG  V  ++P   G P+EIGKG++L +G  VA+L  G  +   LKA   L
Sbjct: 470 DDRPSSLRYPRGEGVGIEMPAI-GTPLEIGKGRILRQGTKVAILSLGTRLAEALKAAEQL 528

Query: 610 SKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDS 669
             LG+  TV DARF KPLD  L+  L + H  LITVEEGSIGGFGSHV  F+A  G LD 
Sbjct: 529 GALGLSTTVVDARFAKPLDEDLIARLAREHELLITVEEGSIGGFGSHVLDFLAHSGALDR 588

Query: 670 GVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTRE 715
           G+K RP+ LPD +I+   P +   +AGL    I  TALS+LG+ R+
Sbjct: 589 GLKVRPMALPDIFIDQDKPEKMYDIAGLNAAQIVETALSVLGQERQ 634


>gi|392378578|ref|YP_004985738.1| 1-deoxy-D-xylulose 5-phosphate synthase [Azospirillum brasilense
           Sp245]
 gi|356880060|emb|CCD01007.1| 1-deoxy-D-xylulose 5-phosphate synthase [Azospirillum brasilense
           Sp245]
          Length = 638

 Score =  630 bits (1625), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 328/639 (51%), Positives = 426/639 (66%), Gaps = 15/639 (2%)

Query: 76  KEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALH 135
            + TP+LDLV  P  L++L  ++L+Q+A E+R+E  S VS T   L + L  VELTVALH
Sbjct: 4   NDKTPLLDLVHTPADLRALKPEQLRQVADELRTETISAVSVTGGHLGAGLGVVELTVALH 63

Query: 136 HVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGC 195
           +VF  P D+++WDVG Q Y HKILTGRR  I TLR   G+SG+T+RSES YDPF AGH  
Sbjct: 64  YVFQTPDDRLIWDVGHQCYPHKILTGRRDRIRTLRTGGGLSGFTNRSESAYDPFGAGHSS 123

Query: 196 NSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHS 255
            S+SAGLGMAVARD  G+   ++ VI +G   AG AYEAM+NAG  +S +IVILND+  S
Sbjct: 124 TSISAGLGMAVARDQLGRDNHVIAVIGDGAMSAGMAYEAMNNAGSANSKLIVILNDNDMS 183

Query: 256 LHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARG 315
           + P         + A+S+ LSR+ SSK +  LR +AK + +++ R +   A + +EYARG
Sbjct: 184 IAPP--------VGAMSAYLSRLISSKPYLSLRHLAKDIAEQLPRPLRTAARRAEEYARG 235

Query: 316 MIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRR---A 372
           M+   G TLFEE+G YYIGP+DGHN++ L+ VLQ V   G   PVL+HVVT++ +    A
Sbjct: 236 MV--TGGTLFEEMGFYYIGPIDGHNLDHLLPVLQNVRDAGDDKPVLIHVVTKKGKGYGPA 293

Query: 373 EDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
           E +        + +  + + S P  N + TY   F  AL+ EAE+D  ++ + A M    
Sbjct: 294 EASADKLHAVAKFDVVTGAQSKPKSN-APTYTRVFANALIAEAERDPGVLAITAAMPSGT 352

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            L LF ++FP+R FDVG+AEQHAVTF+AGLA  G KPFC I S FLQRAYDQVV+DV  Q
Sbjct: 353 GLDLFGQRFPDRCFDVGIAEQHAVTFAAGLATEGFKPFCAIYSTFLQRAYDQVVHDVVLQ 412

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
           RLPVRF +  AGLVG+DG T  GAFD+ ++ CLP++++MA +DE EL+ MVAT A+IDDR
Sbjct: 413 RLPVRFALDRAGLVGADGATHAGAFDVAYLGCLPDIVLMAAADELELMHMVATSAAIDDR 472

Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
               RYPRG  V  +LP  RG  + IGKG++L EG  VA+L YG  +    KA A L   
Sbjct: 473 ASALRYPRGEGVGLELP-ERGEVLPIGKGRILQEGTKVAILSYGTRLAEARKAAAELGAR 531

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 672
           G+  TVADARF KPLD +LVR L   H  LIT+EEGS+GGFGS V   +A+ GLLD G+K
Sbjct: 532 GLSTTVADARFAKPLDEELVRRLALEHEVLITIEEGSVGGFGSFVLQHLAMAGLLDGGLK 591

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
            RP+VLPD +++H SP +Q   AGL   HI ATAL  LG
Sbjct: 592 IRPMVLPDRFLDHDSPARQYEEAGLAARHIVATALQALG 630


>gi|338973838|ref|ZP_08629200.1| 1-deoxy-D-xylulose 5-phosphate synthase [Bradyrhizobiaceae
           bacterium SG-6C]
 gi|338232565|gb|EGP07693.1| 1-deoxy-D-xylulose 5-phosphate synthase [Bradyrhizobiaceae
           bacterium SG-6C]
          Length = 638

 Score =  624 bits (1610), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 321/648 (49%), Positives = 420/648 (64%), Gaps = 32/648 (4%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD +++P  L+ L   +L Q+A E+R+E  + V+ T   L S L  VELTVA+HHVF
Sbjct: 5   TPLLDAIKSPADLRKLKESDLPQVAAEVRAETINAVAVTGGHLGSGLGVVELTVAIHHVF 64

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+++WDVG Q Y HKILT RR  I TLR+  G+SG+T R+ESEYD F A H   S+
Sbjct: 65  NTPADRVIWDVGHQAYPHKILTERRDRIRTLRQGGGLSGFTKRAESEYDCFGAAHSSTSI 124

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVARD+ G    ++ VI +G   AG AYEAM+NAG +DS +IVILND+  S+ P
Sbjct: 125 SAGLGMAVARDLSGGNNNVIAVIGDGAMSAGMAYEAMNNAGAMDSRLIVILNDNEMSIAP 184

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
            +         A+SS LSR+ SS ++R LRE+ K + KR+ + + + A + +EYARGM+ 
Sbjct: 185 PV--------GAMSSYLSRLTSSNTYRSLREIGKQVAKRLPKFVEKGAQRAEEYARGML- 235

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G TLFEELG YY+GP+DGHN++ L+ VL+ V     +GP L+HVVTE+ +     + S
Sbjct: 236 -SGGTLFEELGFYYVGPIDGHNLDHLLPVLKNVRD-SKVGPTLIHVVTEKGKGYTPAEAS 293

Query: 379 E-----------AIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAG 427
                       A  KQ +  +++ +         Y   F  +LV EAEKD  IV + A 
Sbjct: 294 ADKYHGVVKFDVATGKQAKAQANAPA---------YTKVFGNSLVQEAEKDNKIVAITAA 344

Query: 428 MEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVN 487
           M     + +F + FP+R FDVG+AEQHAVTF+AGLA  GLKPF  I S FLQRAYDQVV+
Sbjct: 345 MPSGTGVDIFNKAFPDRTFDVGIAEQHAVTFAAGLASEGLKPFVAIYSTFLQRAYDQVVH 404

Query: 488 DVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVA 547
           DV  Q LPVRF+I  AGLVG+DGPT  G+FDIT++ CLP M++MA +DE ELV MVAT A
Sbjct: 405 DVAIQGLPVRFIIDRAGLVGADGPTHAGSFDITYLGCLPGMVLMAAADEAELVHMVATAA 464

Query: 548 SIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARA 607
           +IDDRP   R+PRG  V  DLP   G+P+EIGKG+++ EG  VALL  G  +   LKA  
Sbjct: 465 AIDDRPSAIRFPRGDGVGVDLPSV-GVPLEIGKGRIVREGSSVALLSLGTRLGEALKAAD 523

Query: 608 LLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLL 667
           +L   G+  TVADARF KP+D  LV  L ++H  L+T+EEGSIGGFG+ V H +A +G L
Sbjct: 524 ILKTHGLTATVADARFAKPIDTDLVLRLARDHDVLVTIEEGSIGGFGAQVLHTLAENGAL 583

Query: 668 DSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTRE 715
           D G+K R +VLPD +I+  SP    A AGL    I       LGR  E
Sbjct: 584 DKGLKVRSMVLPDTFIDQDSPAAMYAKAGLDAKGIVTRVFEALGREGE 631


>gi|414166173|ref|ZP_11422407.1| 1-deoxy-D-xylulose-5-phosphate synthase [Afipia clevelandensis ATCC
           49720]
 gi|410894933|gb|EKS42719.1| 1-deoxy-D-xylulose-5-phosphate synthase [Afipia clevelandensis ATCC
           49720]
          Length = 638

 Score =  624 bits (1609), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 322/648 (49%), Positives = 420/648 (64%), Gaps = 32/648 (4%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD +++P  L+ L   +L Q+A E+R+E  + V+ T   L S L  VELTVA+HHVF
Sbjct: 5   TPLLDAIKSPADLRKLKESDLPQVAAEVRAETINAVAVTGGHLGSGLGVVELTVAIHHVF 64

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+++WDVG Q Y HKILT RR  I TLR+  G+SG+T R+ESEYD F A H   S+
Sbjct: 65  NTPADRVIWDVGHQAYPHKILTERRDRIRTLRQGGGLSGFTKRAESEYDCFGAAHSSTSI 124

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVARD+ G    ++ VI +G   AG AYEAM+NAG +DS +IVILND+  S+ P
Sbjct: 125 SAGLGMAVARDLSGGNNNVIAVIGDGAMSAGMAYEAMNNAGAMDSRLIVILNDNEMSIAP 184

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
            +         A+SS LSR+ SS ++R LRE+ K + KR+ + + + A + +EYARGM+ 
Sbjct: 185 PV--------GAMSSYLSRLTSSNTYRSLREIGKQVAKRLPKFVEKGAQRAEEYARGML- 235

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G TLFEELG YY+GP+DGHN++ L+ VL+ V     +GP L+HVVTE+ +     + S
Sbjct: 236 -SGGTLFEELGFYYVGPIDGHNLDHLLPVLKNVRD-SKVGPTLIHVVTEKGKGYTPAEAS 293

Query: 379 E-----------AIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAG 427
                       A  KQ +  +++ +         Y   F  +LV EAEKD  IV + A 
Sbjct: 294 ADKYHGVVKFDVATGKQAKAQANAPA---------YTKVFGNSLVHEAEKDNKIVAITAA 344

Query: 428 MEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVN 487
           M     + +F + FP+R FDVG+AEQHAVTF+AGLA  GLKPF  I S FLQRAYDQVV+
Sbjct: 345 MPSGTGVDIFNKAFPDRTFDVGIAEQHAVTFAAGLASEGLKPFVAIYSTFLQRAYDQVVH 404

Query: 488 DVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVA 547
           DV  Q LPVRF+I  AGLVG+DGPT  G+FDIT++ CLP M++MA +DE ELV MVAT A
Sbjct: 405 DVAIQGLPVRFIIDRAGLVGADGPTHAGSFDITYLGCLPGMVLMAAADEAELVHMVATAA 464

Query: 548 SIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARA 607
           +IDDRP   R+PRG  V  DLP   G+P+EIGKG+++ EG  VALL  G  +   LKA  
Sbjct: 465 AIDDRPSAIRFPRGDGVGVDLPSV-GVPLEIGKGRIVREGSSVALLSLGTRLGEALKAAD 523

Query: 608 LLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLL 667
           +L   G+  TVADARF KP+D  LV  L ++H  LIT+EEGSIGGFG+ V H +A +G L
Sbjct: 524 ILKTHGLTATVADARFAKPIDTDLVLRLARDHDVLITIEEGSIGGFGAQVLHTLAENGAL 583

Query: 668 DSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTRE 715
           D G+K R +VLPD +I+  SP    A AGL    I       LGR  E
Sbjct: 584 DKGLKVRSMVLPDTFIDQDSPAAMYAKAGLDAKGIVTRVFEALGREGE 631


>gi|407975808|ref|ZP_11156711.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitratireductor indicus
           C115]
 gi|407428669|gb|EKF41350.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitratireductor indicus
           C115]
          Length = 638

 Score =  622 bits (1605), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 319/642 (49%), Positives = 430/642 (66%), Gaps = 20/642 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V  P  LK  +  +L  LA E+RSEL   VS+T   L + L  VELT+ALH+VF
Sbjct: 7   TPLLDKVAYPADLKRFSEDDLPALAAELRSELIDAVSRTGGHLGAGLGVVELTLALHYVF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR  I TLR++ G+ G+T R+ESEYDPF   H   S+
Sbjct: 67  DTPADRLIWDVGHQAYPHKILTGRRDRIRTLRQEGGLYGFTKRTESEYDPFGTAHSSTSI 126

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVARD+KG+R  ++ VI +G   AG AYEAM+NAG LD+ +IVILND+  S+ P
Sbjct: 127 SAGLGMAVARDLKGERRNVIAVIGDGALSAGMAYEAMNNAGSLDARLIVILNDNDMSIAP 186

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                P+    A+S+ L+R+ S ++++ +RE+ K +T  +G+G+     +  E+ARG + 
Sbjct: 187 -----PQ---GAMSAYLARLASGRAYQGVRELGKKLTAALGKGVDRAVTRAVEHARGYV- 237

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G TLFEE+G ++IGP+DGHN+  L+ VL+ V   G+ GPVL+HVVT   ++ +    +
Sbjct: 238 -TGGTLFEEMGFFHIGPIDGHNLRHLVPVLKNVRDHGN-GPVLIHVVT---KKGKGYAPA 292

Query: 379 EAIEKQQEGASDSNSLPFGNY-----SRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
           EA E +  G +  + +          + +Y   F ++L+ EA +D+ +V V A M     
Sbjct: 293 EAAEDKYHGVNRFDVITGAQAKAPANAPSYTKVFAQSLIAEAREDERVVAVTAAMPSGTG 352

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L LF ++FPER FDVG+AEQHAVTF+AGLA  GLKPF  I S FLQRAYDQVV+DV  Q 
Sbjct: 353 LDLFGKEFPERTFDVGIAEQHAVTFAAGLATEGLKPFVAIYSTFLQRAYDQVVHDVALQN 412

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPVRF I  AG VG+DGPT CGAFD+T+++ LPNM+VMA +DE EL  MV T    D  P
Sbjct: 413 LPVRFAIDRAGYVGADGPTHCGAFDVTYLASLPNMVVMAAADEAELRHMVRTACVHDAGP 472

Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
           + FRYPRG  V  D+P  RG  + IG+G+VL EG  VALL +G+ +Q+CLKA   L   G
Sbjct: 473 IAFRYPRGDGVGVDMP-ERGDVLPIGRGRVLREGGKVALLSFGSRLQDCLKAAEELEAAG 531

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKW 673
           +  TVADARF KPLD +LVR L ++H  L+TVEEGSIGGFGSHV +F+A +GLL++G+K 
Sbjct: 532 LSTTVADARFAKPLDEELVRRLARDHEVLLTVEEGSIGGFGSHVLNFLAHEGLLETGLKV 591

Query: 674 RPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTRE 715
           RP+ +PD +++HA P + +  AGL    I  T  + LG+  E
Sbjct: 592 RPLAMPDRFVDHAKPERMVEDAGLDAASIVRTVFTALGQRSE 633


>gi|374341518|gb|AEZ35187.1| 1-deoxy-D-xylulose 5-phosphate synthase-III [Botryococcus braunii]
          Length = 730

 Score =  622 bits (1603), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 316/657 (48%), Positives = 430/657 (65%), Gaps = 28/657 (4%)

Query: 74  WDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVA 133
           W K  TP+LD V+NP+ LK+   ++L+QL  E+R ++ S VS T   L SSL  VELTVA
Sbjct: 70  WRKPKTPLLDTVQNPMHLKNFNKQQLRQLCEELRQDIISSVSTTGGHLGSSLGVVELTVA 129

Query: 134 LHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGH 193
           LH+VF+AP D+I+WDVG Q Y HKILTGRR  ++T+R+  G+SG+T+RSES+YD F AGH
Sbjct: 130 LHYVFNAPYDRIIWDVGHQAYGHKILTGRRDRMNTIRQSGGLSGFTNRSESDYDAFGAGH 189

Query: 194 GCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLD-SNMIVILNDS 252
              S+SA +GMA+  DIKG R   + VI +G    G AYEAM++AG+ +  N+I+ILND+
Sbjct: 190 SSTSISAAVGMAIGLDIKGMRNHSIAVIGDGAITGGMAYEAMNHAGFENVKNLIIILNDN 249

Query: 253 RH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDE 311
           +  SL        ++ + ALS+TL+++Q++K   +LRE  K  TK +   + +  AK+DE
Sbjct: 250 QQVSLPTHYNGQQQSPVGALSATLAKLQTNKGLLELRERVKAFTKTLPAPLQDATAKMDE 309

Query: 312 YARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR- 370
           YARGMI    STLFEELG +Y+GP+DGH++  L+ +L+++      GPVL+HV T++ + 
Sbjct: 310 YARGMISGVASTLFEELGCFYVGPIDGHDVSQLVDILRDLKETPVQGPVLLHVRTQKGQG 369

Query: 371 ---RAEDTQKSEAIEK-------QQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKD 420
                E + +   + K       Q +GA  + S         Y   F +AL+ EAE D  
Sbjct: 370 YKFAEEASDRMHGVGKYDPETGEQFKGAEKTPS---------YTHFFADALIAEAELDSR 420

Query: 421 IVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQR 480
           +  +HA M     +  F ++F  R +DVG+AEQHAVTF+AGLAC GL P   I S+FLQR
Sbjct: 421 VQGIHAAMGGGTGMNRFAKRFQSRTYDVGIAEQHAVTFAAGLACEGLVPVVAIYSSFLQR 480

Query: 481 AYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELV 540
            YDQV++DV  Q LPVRF +  AGLVG+DG T  G  D+TFM CLPNM+VMAPS+E EL 
Sbjct: 481 GYDQVIHDVALQSLPVRFAMDRAGLVGADGATHSGFADVTFMGCLPNMVVMAPSNEAELC 540

Query: 541 DMVATVASIDDRPVCFRYPRGAIVRTDL------PGYRGIPIEIGKGKVLVEGKDVALLG 594
           + +AT  + D+ P CFR+PRG  +  DL      P Y+G P  +GK  +   GKDVA L 
Sbjct: 541 NALATAIAYDEGPSCFRFPRGNGIGVDLAEFGVAPNYKGRPWVLGKASIRRSGKDVAFLA 600

Query: 595 YGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFG 654
           YG +V +CL A  +L+  G+  TV D RFCKPLD ++V+   + H  +ITVEE +IGGFG
Sbjct: 601 YGTVVNDCLAAAEMLAANGVSATVVDMRFCKPLDKEIVKRCAKEHPVVITVEENAIGGFG 660

Query: 655 SHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
           SHV H +AL+GLLD+ VK RP+VLPD +IEHA+  +QLA AGL   HI ATA+  LG
Sbjct: 661 SHVLHCLALEGLLDTNVKVRPMVLPDRFIEHATQQEQLATAGLDAAHIFATAIKTLG 717


>gi|392377749|ref|YP_004984908.1| 1-deoxy-D-xylulose 5-phosphate synthase [Azospirillum brasilense
           Sp245]
 gi|356879230|emb|CCD00134.1| 1-deoxy-D-xylulose 5-phosphate synthase [Azospirillum brasilense
           Sp245]
          Length = 643

 Score =  621 bits (1602), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 326/636 (51%), Positives = 418/636 (65%), Gaps = 15/636 (2%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V  P+ L+ L  ++L+QLA E+R+E  S VS T   L + L  VELTVALH+VF
Sbjct: 10  TPLLDRVRTPVDLRRLKPRQLRQLADELRTETISAVSVTGGHLGAGLGVVELTVALHYVF 69

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR  I TLR   G+SG+T R+ES YDPF A H   ++
Sbjct: 70  DTPADRLIWDVGHQCYPHKILTGRRDRIRTLRTGGGLSGFTRRTESVYDPFGAAHSSTAM 129

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVARD  G+R  +V V+ +G   AG AYEAM+N G  DS +IV+LND+  S+ P
Sbjct: 130 SAGLGMAVARDRLGRRNHVVAVVGDGAMSAGMAYEAMNNIGSGDSRVIVVLNDNNMSIAP 189

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
            +         ALS+ LSR+ SSK F  LR  A+ +   + R +   A + +EYARGM+ 
Sbjct: 190 PV--------GALSAYLSRLISSKPFLTLRHFAEDLAGHMPRPLRTAARRAEEYARGMV- 240

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRR---AEDT 375
             G TLFEE+G YYIGP+DGHN++ L+ VLQ V   G   PVL+HVVT++ +    AE +
Sbjct: 241 -TGGTLFEEMGFYYIGPIDGHNLDHLLPVLQNVRDAGDDKPVLIHVVTKKGKGYGPAEAS 299

Query: 376 QKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQ 435
                   + +  + + S P  N + TY   F  AL+ EAE+D  ++ + A M     L 
Sbjct: 300 ADKLHAVAKFDVVTGAQSKPKSN-APTYTRVFANALIAEAERDPGVLAITAAMPSGTGLD 358

Query: 436 LFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLP 495
           LF ++FP+R FDVG+AEQHAVTF+AGLA  G KPFC I S FLQRAYDQVV+DV  QRLP
Sbjct: 359 LFGQRFPDRCFDVGIAEQHAVTFAAGLATEGFKPFCAIYSTFLQRAYDQVVHDVVLQRLP 418

Query: 496 VRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVC 555
           VRF +  AGLVG+DG T  GAFD+ ++ CLP++++MA +DE EL+ MVAT A+IDDR   
Sbjct: 419 VRFALDRAGLVGADGATHAGAFDVAYLGCLPDIVLMAAADELELMHMVATSAAIDDRVSA 478

Query: 556 FRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGID 615
            RYPRG  V  +LP  RG  + IGKG++L EG  VA+L YG  +    KA A L   G+ 
Sbjct: 479 LRYPRGEGVGLELP-ERGEVLPIGKGRILQEGTKVAILSYGTRLAEARKAAAELGARGLS 537

Query: 616 VTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWRP 675
            TVADARF KPLD  LVR L   H  LIT+EEGS+GGFGS V   +A+ GLLD G+K RP
Sbjct: 538 TTVADARFAKPLDEDLVRRLALEHEVLITIEEGSVGGFGSFVLQHLAMAGLLDGGLKIRP 597

Query: 676 IVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
           +VLPD +++H SP +Q   AGL   HI ATAL  LG
Sbjct: 598 MVLPDRFLDHDSPARQYEEAGLAARHIVATALQALG 633


>gi|407777509|ref|ZP_11124778.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitratireductor pacificus
           pht-3B]
 gi|407300758|gb|EKF19881.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitratireductor pacificus
           pht-3B]
          Length = 640

 Score =  621 bits (1601), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 323/642 (50%), Positives = 425/642 (66%), Gaps = 20/642 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V  P  LK L  ++L QLA E+R+EL   VSKT   L + L  VELTVALH+VF
Sbjct: 9   TPLLDEVVYPADLKRLAEEKLPQLADELRAELIDAVSKTGGHLGAGLGVVELTVALHYVF 68

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+I+WDVG Q Y HKI+TGRR  I TLR++ G+ G+T R+ESEYDPF   H   S+
Sbjct: 69  DTPDDRIIWDVGHQAYPHKIITGRRDRIRTLRQEGGLYGFTKRAESEYDPFGTAHSSTSI 128

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVARD++G++  ++ VI +G   AG AYEAM+NAG LD+ +IVILND+  S+ P
Sbjct: 129 SAGLGMAVARDLRGEKRNVIAVIGDGAMSAGMAYEAMNNAGALDARLIVILNDNDMSIAP 188

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                P+    A+S+ L+R+ S ++++ +RE+ K +T  +G+G+     +  E+ARG + 
Sbjct: 189 -----PQ---GAMSAYLARLASGRTYQGVRELGKKLTSYLGKGVDRAVTRAVEHARGYV- 239

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G TLFEE+G ++IGP+DGHN++ L+ VL+ V   G  GPVL+HVVT   ++ +    +
Sbjct: 240 -TGGTLFEEMGFFHIGPIDGHNLKHLVPVLKNVRDNGD-GPVLIHVVT---KKGKGYPPA 294

Query: 379 EAIEKQQEGASDSNSLPFGNY-----SRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
           EA E +  G +  + +          + +Y   F ++LV EA  D+ IV V A M     
Sbjct: 295 EAAEDKYHGVNKFDVITGAQAKAPANAPSYTKVFAQSLVQEARADERIVAVTAAMPSGTG 354

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L LF  +FPER FDVG+AEQHAVTF+AG+A  GL+PF  I S FLQRAYDQVV+DV  Q 
Sbjct: 355 LDLFGTEFPERTFDVGIAEQHAVTFAAGMATEGLRPFAAIYSTFLQRAYDQVVHDVALQN 414

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPVRF I  AG VG+DGPT CGAFDIT+++ LPNM VMA +DE EL  MV T A  D  P
Sbjct: 415 LPVRFAIDRAGFVGADGPTHCGAFDITYLASLPNMAVMAAADEAELRHMVRTAAEYDAGP 474

Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
           + FRYPRG  V  D+P  RG  + IG+G+VL EG  VALL  G  +Q+CL+A   L   G
Sbjct: 475 IAFRYPRGDGVGVDMP-ERGEVLAIGRGRVLREGSKVALLSLGGRLQDCLRAAEELDAAG 533

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKW 673
           +  TVADARF KPLD  L+R L + H  LIT+EEGSIGGFGSHV +F+A +GLL+SGVK 
Sbjct: 534 LSTTVADARFAKPLDEALIRHLAREHEVLITIEEGSIGGFGSHVLNFLAHEGLLESGVKV 593

Query: 674 RPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTRE 715
           RP+ +PD +I HA P + +  AGL    I  T  + LG+  E
Sbjct: 594 RPMTMPDRFINHAKPERMIEDAGLDAAAIVRTVFAALGQHAE 635


>gi|148260827|ref|YP_001234954.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidiphilium cryptum JF-5]
 gi|338979876|ref|ZP_08631214.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidiphilium sp. PM]
 gi|146402508|gb|ABQ31035.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidiphilium cryptum JF-5]
 gi|338209213|gb|EGO96994.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidiphilium sp. PM]
          Length = 647

 Score =  619 bits (1597), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 324/643 (50%), Positives = 420/643 (65%), Gaps = 25/643 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V  P  L++ +  +L+QLA E+R+E    VS T   L +SL  VELTVALH VF
Sbjct: 5   TPLLDRVRVPSDLRNFSADQLRQLAGELRAETIDTVSVTGGHLGASLGVVELTVALHAVF 64

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG QTY HKILTGRR  I TLR+  G+SG+T RSESEYDPF A H   S+
Sbjct: 65  ETPRDRLIWDVGHQTYPHKILTGRRDRIRTLRQPGGLSGFTRRSESEYDPFGAAHSSTSI 124

Query: 199 SAGLGMAVARDIKGK--RECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSL 256
           SAGLGMAVARD+K +  +  ++ VI +G   AG AYEAM+NAG   S MIVILND+  S+
Sbjct: 125 SAGLGMAVARDLKDESPKRHVIAVIGDGAMSAGMAYEAMNNAGASKSRMIVILNDNDMSI 184

Query: 257 HPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGM 316
            P +         A+S+ LSR+ SS+SF  +R+ A  M KR  R +   A + +EYARG+
Sbjct: 185 APPV--------GAMSAYLSRLISSRSFLSIRDFAARMAKRFPRTLERTAKRAEEYARGI 236

Query: 317 IGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQ 376
           +   G TLFEELG YY+GP+DGHN++ L+ VL+ +  +    P+L+HVVT++ +      
Sbjct: 237 L--TGGTLFEELGFYYVGPIDGHNLDHLLPVLRNLRDIDGDEPILLHVVTQKGK---GYA 291

Query: 377 KSEAIEKQQEGASDSNSL-------PFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGME 429
            +EA   +  G S  N +       P G  S  Y   F +AL+ EAE + ++V V A M 
Sbjct: 292 PAEASADKYHGVSKFNVVTGEQTKAPPGPPS--YTKVFAQALIAEAEHNPNVVAVTAAMP 349

Query: 430 MDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDV 489
               L  F ++FP+R FDVG+AEQHAVTF+AG+A  G+ PFC I S FLQRAYDQVV+DV
Sbjct: 350 SGTGLDAFAKRFPDRCFDVGIAEQHAVTFAAGMATEGMAPFCAIYSTFLQRAYDQVVHDV 409

Query: 490 DQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASI 549
             Q LPVRF +  AGLVG+DG T  GA+D+ ++ CLP M++MAPSDE EL++ VAT A+I
Sbjct: 410 AIQSLPVRFAMDRAGLVGADGATHAGAYDLAYLGCLPGMVIMAPSDEAELMNCVATAAAI 469

Query: 550 DDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALL 609
           DDRP  FRYPRG      LP  RG P EIGKG+++ EG  VA+L  G  +   LKA   L
Sbjct: 470 DDRPSAFRYPRGEGTGVQLPA-RGTPWEIGKGRIVREGSKVAVLALGPRLAEALKAADEL 528

Query: 610 SKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDS 669
           +  G   TVADARF KPLD  LV +L ++H  LIT+E+GS GGFG+ V H +A  G  DS
Sbjct: 529 AARGFPATVADARFMKPLDTALVDQLARHHEVLITIEDGSSGGFGAAVGHHLAWSGAFDS 588

Query: 670 GVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
           G+++RP+ LPD +I+H SP  QL  AGLT   I A AL  LGR
Sbjct: 589 GLRFRPMTLPDRFIDHNSPAGQLIDAGLTAKDIVAHALGALGR 631


>gi|299133455|ref|ZP_07026649.1| deoxyxylulose-5-phosphate synthase [Afipia sp. 1NLS2]
 gi|298591291|gb|EFI51492.1| deoxyxylulose-5-phosphate synthase [Afipia sp. 1NLS2]
          Length = 638

 Score =  619 bits (1597), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 320/648 (49%), Positives = 420/648 (64%), Gaps = 32/648 (4%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD +  P  L+ L   EL Q+A E+R+E  + V+ T   L S L  VELTVALHHVF
Sbjct: 5   TPLLDQINCPSDLRKLKESELAQVAQELRAETINTVAVTGGHLGSGLGVVELTVALHHVF 64

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+I+WDVG Q Y HKILT RR  I TLR+  G+SG+T R+ESEYD F   H   S+
Sbjct: 65  NTPEDRIIWDVGHQAYPHKILTSRRDRIRTLRQGGGLSGFTKRAESEYDCFGTAHSSTSI 124

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVARD+ G    ++ VI +G   AG AYEAM+NAG +DS +IVILND+  S+ P
Sbjct: 125 SAGLGMAVARDLSGANNNVIAVIGDGAMSAGMAYEAMNNAGAMDSRLIVILNDNEMSIAP 184

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                    + A+SS LSR+ SS ++R LRE+ K + KR+ + + + A + +EYARGM+ 
Sbjct: 185 --------PVGAMSSYLSRLTSSNTYRSLREIGKQVAKRLPKFVEKGAQRAEEYARGML- 235

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G TLFEELG YY+GP+DGHN++ L+ VL+ V     +GP L+HVVT++ +     + +
Sbjct: 236 -SGGTLFEELGFYYVGPIDGHNLDHLLPVLKNVRD-SKVGPTLIHVVTQKGKGYSHAETA 293

Query: 379 E-----------AIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAG 427
           +           A  KQ +  +++ S         Y   F  ALV  AEKD+ I+ + A 
Sbjct: 294 KDKYHGVVKFDVATGKQNKAKANAPS---------YTSVFGNALVKLAEKDEKIIGITAA 344

Query: 428 MEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVN 487
           M     + +FQ+ +PER FDVG+AEQHAVTF+AGLA  G+KPF  I S FLQRAYDQVV+
Sbjct: 345 MPSGTGIDIFQKVYPERTFDVGIAEQHAVTFAAGLATEGMKPFVAIYSTFLQRAYDQVVH 404

Query: 488 DVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVA 547
           DV  Q+LPVRFVI  AGLVG+DGPT  G+FD+ ++ CLP+M++MA SDE ELV MVAT A
Sbjct: 405 DVAIQKLPVRFVIDRAGLVGADGPTHAGSFDLAYLGCLPDMVIMAASDEAELVHMVATAA 464

Query: 548 SIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARA 607
            I+DRP  FR+PRG  V  DLP   G+P+EIGKG+++ EG  VA+L  G  +   LKA  
Sbjct: 465 GINDRPSAFRFPRGDGVGVDLPS-EGVPLEIGKGRIVREGSSVAILSLGTRLNESLKAAD 523

Query: 608 LLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLL 667
           +L   G+  TVADARF KP+D  LV +L ++H  LIT+EEG+IGGFG+ V H +A  G L
Sbjct: 524 ILKSHGLTTTVADARFAKPIDTDLVLQLARDHDVLITIEEGAIGGFGAQVLHTLAEAGAL 583

Query: 668 DSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTRE 715
           D G+K R +VLPD +I+  SP    A AGL    I       LGR  E
Sbjct: 584 DKGLKVRSMVLPDVFIDQDSPAAMYAKAGLDAKGIVKRVFEALGRENE 631


>gi|326404221|ref|YP_004284303.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidiphilium multivorum
           AIU301]
 gi|325051083|dbj|BAJ81421.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidiphilium multivorum
           AIU301]
          Length = 647

 Score =  619 bits (1597), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 324/643 (50%), Positives = 420/643 (65%), Gaps = 25/643 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V  P  L++ +  +L+QLA E+R+E    VS T   L +SL  VELTVALH VF
Sbjct: 5   TPLLDRVRVPSDLRNFSADQLRQLAGELRAETIDTVSVTGGHLGASLGVVELTVALHAVF 64

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG QTY HKILTGRR  I TLR+  G+SG+T RSESEYDPF A H   S+
Sbjct: 65  ETPRDRLIWDVGHQTYPHKILTGRRDRIRTLRQPGGLSGFTRRSESEYDPFGAAHSSTSI 124

Query: 199 SAGLGMAVARDIKGK--RECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSL 256
           SAGLGMAVARD+K +  +  ++ VI +G   AG AYEAM+NAG   S MIVILND+  S+
Sbjct: 125 SAGLGMAVARDLKDESPKRHVIAVIGDGAMSAGMAYEAMNNAGASKSRMIVILNDNDMSI 184

Query: 257 HPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGM 316
            P +         A+S+ LSR+ SS+SF  +R+ A  M KR  R +   A + +EYARG+
Sbjct: 185 APPV--------GAMSAYLSRLISSRSFLSIRDFAARMAKRFPRTLERTAKRAEEYARGI 236

Query: 317 IGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQ 376
           +   G TLFEELG YY+GP+DGHN++ L+ VL+ +  +    P+L+HVVT++ +      
Sbjct: 237 L--TGGTLFEELGFYYVGPIDGHNLDHLLPVLRNLRDIDGDEPILLHVVTQKGK---GYA 291

Query: 377 KSEAIEKQQEGASDSNSL-------PFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGME 429
            +EA   +  G S  N +       P G  S  Y   F +AL+ EAE + ++V V A M 
Sbjct: 292 PAEASADKYHGVSKFNVVTGEQTKAPPGPPS--YTKVFAQALIAEAEHNPNVVAVTAAMP 349

Query: 430 MDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDV 489
               L  F ++FP+R FDVG+AEQHAVTF+AG+A  G+ PFC I S FLQRAYDQVV+DV
Sbjct: 350 SGTGLDAFGKRFPDRCFDVGIAEQHAVTFAAGMATEGMAPFCAIYSTFLQRAYDQVVHDV 409

Query: 490 DQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASI 549
             Q LPVRF +  AGLVG+DG T  GA+D+ ++ CLP M++MAPSDE EL++ VAT A+I
Sbjct: 410 AIQSLPVRFAMDRAGLVGADGATHAGAYDLAYLGCLPGMVIMAPSDEAELMNCVATAAAI 469

Query: 550 DDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALL 609
           DDRP  FRYPRG      LP  RG P EIGKG+++ EG  VA+L  G  +   LKA   L
Sbjct: 470 DDRPSAFRYPRGEGTGVQLPA-RGTPWEIGKGRIVREGSKVAVLALGPRLAEALKAADEL 528

Query: 610 SKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDS 669
           +  G   TVADARF KPLD  LV +L ++H  LIT+E+GS GGFG+ V H +A  G  DS
Sbjct: 529 AARGFPATVADARFMKPLDTALVDQLARHHEVLITIEDGSSGGFGAAVGHHLAWSGAFDS 588

Query: 670 GVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
           G+++RP+ LPD +I+H SP  QL  AGLT   I A AL  LGR
Sbjct: 589 GLRFRPMTLPDRFIDHNSPAGQLIDAGLTAKDIVAHALGALGR 631


>gi|414163144|ref|ZP_11419391.1| 1-deoxy-D-xylulose-5-phosphate synthase [Afipia felis ATCC 53690]
 gi|410880924|gb|EKS28764.1| 1-deoxy-D-xylulose-5-phosphate synthase [Afipia felis ATCC 53690]
          Length = 638

 Score =  619 bits (1596), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 321/648 (49%), Positives = 421/648 (64%), Gaps = 32/648 (4%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD +  P  L+ L   EL Q+A E+R+E  + V+ T   L S L  VELTVALHHVF
Sbjct: 5   TPLLDQINCPADLRKLKESELLQVAQELRAETINTVAVTGGHLGSGLGVVELTVALHHVF 64

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+I+WDVG Q Y HKILT RR  I TLR+  G+SG+T R+ESEYD F   H   S+
Sbjct: 65  NTPDDRIIWDVGHQAYPHKILTSRRDRIRTLRQGGGLSGFTKRAESEYDCFGTAHSSTSI 124

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVARD+ G    ++ VI +G   AG AYEAM+NAG +DS +IVILND+  S+ P
Sbjct: 125 SAGLGMAVARDLSGGNNNVIAVIGDGAMSAGMAYEAMNNAGAMDSRLIVILNDNEMSIAP 184

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                    + A+SS LSR+ SS ++R LRE+ K + KR+ + + + A + +EYARGM+ 
Sbjct: 185 --------PVGAMSSYLSRLTSSNTYRSLREIGKQVAKRLPKFVEKGAQRAEEYARGML- 235

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G TLFEELG YY+GP+DGHN++ L+ VL+ V     +GP L+HVVTE+ +     + +
Sbjct: 236 -SGGTLFEELGFYYVGPIDGHNLDHLLPVLKNVRD-SKVGPTLIHVVTEKGKGYSHAETA 293

Query: 379 E-----------AIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAG 427
           +           A  KQ +  +++ S         Y   F  ALV  AEKD+ I+ + A 
Sbjct: 294 KDKYHGVVKFDVATGKQDKAKANAPS---------YTSVFGNALVKLAEKDEKIIGITAA 344

Query: 428 MEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVN 487
           M     + +FQ+ +PER FDVG+AEQHAVTF+AGLA  G+KPF  I S FLQRAYDQVV+
Sbjct: 345 MPSGTGVDIFQKVYPERTFDVGIAEQHAVTFAAGLATEGMKPFVAIYSTFLQRAYDQVVH 404

Query: 488 DVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVA 547
           DV  Q+LPVRFVI  AGLVG+DGPT  G+FD+ ++ CLP+M++MA SDE ELV MVAT A
Sbjct: 405 DVAIQKLPVRFVIDRAGLVGADGPTHAGSFDLAYLGCLPDMVIMAASDEAELVHMVATAA 464

Query: 548 SIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARA 607
           +I+DRP  FR+PRG  V  DLP   G+P+EIGKG+++ EG  VA+L  G  +   LKA  
Sbjct: 465 AINDRPSAFRFPRGDGVGVDLPA-EGVPLEIGKGRIVREGSSVAILSLGTRLNESLKAAD 523

Query: 608 LLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLL 667
           +L   G+  TVADARF KP+D  LV +L ++H  LIT+EEG+IGGFG+ V H +A  G L
Sbjct: 524 ILKSHGLTTTVADARFAKPIDTDLVLQLARDHDVLITIEEGAIGGFGAQVLHTLAEAGAL 583

Query: 668 DSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTRE 715
           D G+K R +VLPD +I+  SP    A AGL    I       LGR  E
Sbjct: 584 DKGLKVRSMVLPDVFIDQDSPAAMYAKAGLDAKGIVKRVFEALGRENE 631


>gi|414172488|ref|ZP_11427399.1| 1-deoxy-D-xylulose-5-phosphate synthase [Afipia broomeae ATCC
           49717]
 gi|410894163|gb|EKS41953.1| 1-deoxy-D-xylulose-5-phosphate synthase [Afipia broomeae ATCC
           49717]
          Length = 638

 Score =  619 bits (1595), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 317/648 (48%), Positives = 421/648 (64%), Gaps = 32/648 (4%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD +++P  L+ +   +L Q+A E+R+E  S V+ T   L S L  VELTVA+HHVF
Sbjct: 5   TPLLDAIKSPADLRKMKESDLPQVAAELRAETISAVAVTGGHLGSGLGVVELTVAIHHVF 64

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+++WDVG Q Y HKILT RR  I TLR+  G+SG+T R+ESEYD F A H   S+
Sbjct: 65  NTPSDRVIWDVGHQAYPHKILTERRDRIRTLRQGGGLSGFTKRAESEYDCFGAAHSSTSI 124

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVARD+ G+   IV VI +G   AG AYEAM+NAG +DS +IVILND+  S+ P
Sbjct: 125 SAGLGMAVARDLAGEERNIVAVIGDGAMSAGMAYEAMNNAGAMDSRLIVILNDNEMSIAP 184

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                    + A+S+ LSR+ SS ++R LRE+ K + KR+ + + + A + +EYARG + 
Sbjct: 185 P--------VGAMSAYLSRLTSSNTYRSLREIGKQVAKRLPKFIEKGAQRAEEYARGFL- 235

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G TLFEELG +Y+GP+DGHN++ L+ VL+ V     +GP L+HVVTE+ +     + S
Sbjct: 236 -SGGTLFEELGFFYVGPIDGHNLDHLLPVLKNVRD-SKVGPTLIHVVTEKGKGYTPAETS 293

Query: 379 E-----------AIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAG 427
                       A  KQ +  +++ +         Y   F ++LV EAEKD  IV + A 
Sbjct: 294 ADKYHGVVKFDVATGKQAKAQANAPA---------YTKVFGQSLVQEAEKDDKIVAITAA 344

Query: 428 MEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVN 487
           M     + +F + FPER FDVG+AEQH VTF+AGLA  GLKPF  I S FLQRAYDQVV+
Sbjct: 345 MPSGTGVDIFGKAFPERTFDVGIAEQHGVTFAAGLASEGLKPFVAIYSTFLQRAYDQVVH 404

Query: 488 DVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVA 547
           DV  Q LPVRF+I  AGLVG+DGPT  G+FD+ ++ CLP M++MA +DE ELV MVAT A
Sbjct: 405 DVAIQGLPVRFIIDRAGLVGADGPTHAGSFDLAYLGCLPGMVLMAAADEAELVHMVATAA 464

Query: 548 SIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARA 607
           +I+DRP   R+PRG  V  DLP   G+P+EIGKG+++ EG  VAL+  G  +Q CLKA  
Sbjct: 465 AINDRPSAIRFPRGDGVGVDLPSV-GVPLEIGKGRIVREGSSVALVSLGTRLQECLKAAD 523

Query: 608 LLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLL 667
           +L   G+  TVADARF KP+D  L+  L ++H  L+T+EEGSIGGFG+ V H +A +G L
Sbjct: 524 ILKTHGLTTTVADARFAKPIDTDLILRLARDHDVLVTIEEGSIGGFGAQVLHTLAENGAL 583

Query: 668 DSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTRE 715
           D G+K R +VLPD +I+  SP    A AGL    I       LGR  E
Sbjct: 584 DKGLKVRSMVLPDTFIDQDSPAAMYAKAGLDAKGIVTRVFEALGREGE 631


>gi|402850980|ref|ZP_10899163.1| 1-deoxy-D-xylulose 5-phosphate synthase [Rhodovulum sp. PH10]
 gi|402498749|gb|EJW10478.1| 1-deoxy-D-xylulose 5-phosphate synthase [Rhodovulum sp. PH10]
          Length = 641

 Score =  619 bits (1595), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 319/639 (49%), Positives = 413/639 (64%), Gaps = 18/639 (2%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V  P  L+ L   EL+QLA E+R E+ S VS+T   L + L  VELTVALH+VF
Sbjct: 7   TPLLDRVNTPDDLRRLEPGELRQLADELRQEMISAVSQTGGHLGAGLGVVELTVALHYVF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKI+TGRR  I TLR+  G+SG+T RSESEYDPF A H   S+
Sbjct: 67  STPEDRLIWDVGHQAYPHKIITGRRDRIRTLRQGGGLSGFTKRSESEYDPFGAAHSSTSI 126

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMA+ARD+  K   +V VI +G   AG AYEA++NAG +DSN+IV+LND+  S+ P
Sbjct: 127 SAGLGMAIARDLDEKANNVVCVIGDGAMSAGMAYEALNNAGAMDSNLIVVLNDNDMSIAP 186

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                    + ALS+ L+R+ + + +  LRE+ K   +R+ R +HE A + +E+AR MI 
Sbjct: 187 --------PVGALSAYLARLMTGRPYLSLREIGKQFAQRLPRRIHEQAVRAEEFARNMI- 237

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G TLFEELG YY+GP+DGHN++ L+ VL+ V      GP+LVHVVT++ +       +
Sbjct: 238 THGGTLFEELGFYYVGPIDGHNLDHLLPVLKNVRDAKRRGPILVHVVTQKGK---GYAPA 294

Query: 379 EAIEKQQEG-----ASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
           E    +  G      +    +     + +Y   F EALV EA+KD  +V + A M     
Sbjct: 295 EVSADKYHGVVKFDVATGAQVKSNAKAPSYTKVFSEALVQEAKKDSKVVAITAAMPAGTG 354

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           + LF E FP+R+FDVG+AEQHAVTF+AGLA  G KPF  I S FLQRAYDQVV+DV  Q+
Sbjct: 355 VDLFGELFPDRFFDVGIAEQHAVTFAAGLATEGYKPFVAIYSTFLQRAYDQVVHDVALQK 414

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPVRF +  AGLVG+DGPT  G+FDI F+ C+PNM++MA +DE +LV MVAT A+ DD P
Sbjct: 415 LPVRFCMDRAGLVGADGPTHAGSFDIAFLGCIPNMVLMAAADEADLVHMVATQAATDDAP 474

Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
              RYPRG      +P   G+P+EIGKG++L EG  VAL  YG  +  CL A   L+  G
Sbjct: 475 TALRYPRGEGTGVTVP-LEGVPLEIGKGRILREGHKVALFSYGTRLGECLAAADELAAHG 533

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKW 673
           +  TVADARF KPLDI L+  L + H  LITVEEGS+GGFGS     +A  GLLD G+K 
Sbjct: 534 LATTVADARFAKPLDIDLLTRLAREHEVLITVEEGSVGGFGSFCLQALAEAGLLDRGLKV 593

Query: 674 RPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
           RP+VLPD YI+H +     A AGL    I A     LG+
Sbjct: 594 RPLVLPDCYIDHDTQPAMYAKAGLDRRGIVAKVFEALGK 632


>gi|209885785|ref|YP_002289642.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oligotropha
           carboxidovorans OM5]
 gi|337740631|ref|YP_004632359.1| 1-deoxy-D-xylulose-5-phosphate synthase Dxs [Oligotropha
           carboxidovorans OM5]
 gi|386029648|ref|YP_005950423.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oligotropha
           carboxidovorans OM4]
 gi|209873981|gb|ACI93777.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oligotropha
           carboxidovorans OM5]
 gi|336094716|gb|AEI02542.1| 1-deoxy-D-xylulose-5-phosphate synthase Dxs [Oligotropha
           carboxidovorans OM4]
 gi|336098295|gb|AEI06118.1| 1-deoxy-D-xylulose-5-phosphate synthase Dxs [Oligotropha
           carboxidovorans OM5]
          Length = 638

 Score =  618 bits (1593), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 324/648 (50%), Positives = 415/648 (64%), Gaps = 32/648 (4%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD +  P  L+ L   EL QLA E+R+E  + V+ T   L S L  VELTVALHHVF
Sbjct: 5   TPLLDQINCPSDLRKLKESELTQLAQELRAETINTVAVTGGHLGSGLGVVELTVALHHVF 64

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+I+WDVG Q Y HKILT RR  I TLR+  G+SG+T R+ESEYD F   H   S+
Sbjct: 65  NTPDDRIIWDVGHQAYPHKILTSRRDRIRTLRQGGGLSGFTKRAESEYDCFGTAHSSTSI 124

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVARD+ G+   +V VI +G   AG AYEAM+NAG +DS +IVILND+  S+ P
Sbjct: 125 SAGLGMAVARDLAGENRSVVAVIGDGAMSAGMAYEAMNNAGAMDSRLIVILNDNEMSIAP 184

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                    + A+SS L+R+ SS ++R LRE+ K + +R+ + M + A + +EYARGMI 
Sbjct: 185 --------PVGAMSSYLTRLTSSNAYRSLREIGKQVARRLPKFMEKGAQRAEEYARGMI- 235

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G TLFEELG YY+GP+DGHN++ L+ VL+ V     +GP LVHVVT++ +     + +
Sbjct: 236 -SGGTLFEELGFYYVGPIDGHNLDQLLPVLKNVRD-SKVGPTLVHVVTQKGKGYSHAETA 293

Query: 379 E-----------AIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAG 427
           +           A  KQ +  +++ S         Y   F   L   AE D  IV + A 
Sbjct: 294 KDKYHGVVKFDVATGKQNKAKANAPS---------YTSVFGSTLARLAETDDKIVGITAA 344

Query: 428 MEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVN 487
           M     + LFQ+  PER FDVG+AEQHAVTF+AGLA  G+KPF  + S FLQRAYDQVV+
Sbjct: 345 MPSGTGIDLFQKVHPERTFDVGIAEQHAVTFAAGLATEGMKPFVALYSTFLQRAYDQVVH 404

Query: 488 DVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVA 547
           DV  QRLPVRFVI  AGLVG+DGPT  G+FDI ++ CLP+M++MA +DE ELV MVAT A
Sbjct: 405 DVAIQRLPVRFVIDRAGLVGADGPTHAGSFDIAYLGCLPDMVIMAAADEAELVHMVATAA 464

Query: 548 SIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARA 607
           +I+DRP  FR+PRG  V  DLP     P+EIGKG+++ EG  VA+L  G  +   LKA  
Sbjct: 465 AINDRPSAFRFPRGDGVGIDLP-TEPTPLEIGKGRIVREGSSVAILSLGTRLAESLKAAD 523

Query: 608 LLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLL 667
           +L   G+  TVADARF KPLD  LV +L   H  LIT+EEGSIGGFG+HV H +A  G+L
Sbjct: 524 ILKSHGLTTTVADARFAKPLDTDLVLKLAHEHEVLITIEEGSIGGFGAHVLHLLAEHGVL 583

Query: 668 DSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTRE 715
           D G+K R +VLPD +I+  SP    A AGL    I       LGR  E
Sbjct: 584 DKGLKVRSMVLPDVFIDQDSPAAMYAKAGLDAKGIVTRVFEALGRENE 631


>gi|359793593|ref|ZP_09296338.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mesorhizobium alhagi
           CCNWXJ12-2]
 gi|359250198|gb|EHK53724.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mesorhizobium alhagi
           CCNWXJ12-2]
          Length = 637

 Score =  617 bits (1592), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 321/643 (49%), Positives = 419/643 (65%), Gaps = 20/643 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V  P  L++L   +L QLA E+R+EL   VS+T   L + L  VELTVALH+VF
Sbjct: 7   TPLLDKVRIPSDLRALPESQLPQLAAELRAELIDAVSQTGGHLGAGLGVVELTVALHYVF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR  I TLR + G+SG+T R ESEYDPF A H   S+
Sbjct: 67  DTPGDRLIWDVGHQAYPHKILTGRRDRIRTLRAEGGLSGFTKRQESEYDPFGAAHSSTSI 126

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMA+ARD+ G++  +++VI +G   AG AYEAM+NAG LD+ +IVILND+  S+ P
Sbjct: 127 SAGLGMAMARDLTGRKNNVISVIGDGAMSAGMAYEAMNNAGALDARLIVILNDNDMSIAP 186

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S+ L+R+ S +++   R+  K +T  +G+ +     +  E+ARG + 
Sbjct: 187 --------PSGAMSAYLARLASGRAYMGFRDFGKKLTSYLGKRVDRAVTRAVEHARGYV- 237

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G T+FEELG Y+IGP+DGHN+E L+ VL+ V   G  GPVL+H+VT++ +       +
Sbjct: 238 -TGGTMFEELGFYHIGPIDGHNLEHLVPVLRNVRDNGD-GPVLIHIVTQKGK---GYAPA 292

Query: 379 EAIEKQQEGASDSNSLPFGNY-----SRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
           EA   +  G +  + +          + +Y   F E+L+ EA  D  IV + A M     
Sbjct: 293 EAASDKYHGVNKFDVITGAQAKAPANAPSYTKVFAESLIQEARDDDRIVAITAAMPSGTG 352

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L LF E FP R FDVG+AEQHAVTF+AGLA  GLKPF  I S FLQRAYDQVV+DV  Q+
Sbjct: 353 LDLFGEAFPSRTFDVGIAEQHAVTFAAGLATEGLKPFVAIYSTFLQRAYDQVVHDVAIQK 412

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPVRF I  AG VG+DGPT CGAFD T+++ LP  +VMA +DE EL  MV T A  D+ P
Sbjct: 413 LPVRFPIDRAGFVGADGPTHCGAFDTTYLASLPGFVVMAAADEAELRHMVRTAAIYDEGP 472

Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
           + FRYPRG  V  D+P  RG+ +EIGKG+++ EG  VALL +G  +Q+CL A   L+  G
Sbjct: 473 IAFRYPRGNGVGVDMP-ERGVALEIGKGRIVREGTKVALLSFGTRLQDCLLAAEELAAAG 531

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKW 673
           +  TVADARF KPLD  LVR L + H  L+TVEEG+IGGF SHV  F+A DGLLDSG+K 
Sbjct: 532 LPTTVADARFAKPLDEDLVRRLARGHEMLVTVEEGAIGGFASHVLQFLARDGLLDSGLKV 591

Query: 674 RPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREA 716
           RP+VLPD + +HA P +  A AGL    I  T  + LGRT  A
Sbjct: 592 RPLVLPDAFTDHAKPEKMYADAGLDSAGIVRTVFAALGRTAHA 634


>gi|337270073|ref|YP_004614128.1| deoxyxylulose-5-phosphate synthase [Mesorhizobium opportunistum
           WSM2075]
 gi|336030383|gb|AEH90034.1| deoxyxylulose-5-phosphate synthase [Mesorhizobium opportunistum
           WSM2075]
          Length = 637

 Score =  617 bits (1591), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 325/644 (50%), Positives = 416/644 (64%), Gaps = 22/644 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V  P  L++L   EL QLA E+R EL   VS+T   L + L  VELTVALH+VF
Sbjct: 7   TPLLDKVRIPADLRALAESELPQLASELRLELIDAVSRTGGHLGAGLGVVELTVALHYVF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR  I TLR++ G+SG+T R+ESEYDPF A H   S+
Sbjct: 67  DTPDDRLIWDVGHQAYPHKILTGRRDRIRTLRQEGGLSGFTRRAESEYDPFGAAHSSTSI 126

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMA ARD+ G R  ++ VI +G   AG AYEAM+NAG LD+ +IVILND+  S+ P
Sbjct: 127 SAGLGMAAARDLSGGRNNVIAVIGDGAMSAGMAYEAMNNAGALDARLIVILNDNDMSIAP 186

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S+ L+R+ S K++  LR+  K +T  +G+       +  E+ARG + 
Sbjct: 187 P--------TGAMSAYLARLASGKAYAGLRDFGKKLTSYLGKRADRAITRAVEHARGYV- 237

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G TLFEELG Y+IGP+DGHN+E LI VL+ V   G  GPVL+HVVT++ +       +
Sbjct: 238 -TGGTLFEELGFYHIGPIDGHNLEHLIPVLKNVRDNGE-GPVLIHVVTQKGK---GYAPA 292

Query: 379 EAIEKQQEGASDSNSLPFGNYSR------TYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
           EA   +  G +  + +  G  ++       Y   F E+L+ EA +D  IV V A M    
Sbjct: 293 EAAADKYHGVNKFDVIT-GTQAKAPANAPAYTKVFAESLIQEAREDDRIVAVTAAMPGGT 351

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            L LF E FP R FDVG+AEQHAVTF+AGLA  G KPF  I S FLQRAYDQVV+DV  Q
Sbjct: 352 GLDLFGEVFPARTFDVGIAEQHAVTFAAGLATEGYKPFAAIYSTFLQRAYDQVVHDVAIQ 411

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
           +LPVRF I  AG VG+DG T CGAFD TF++ LP  +VMA +DE EL  MV T AS DD 
Sbjct: 412 KLPVRFPIDRAGFVGADGATHCGAFDTTFLASLPGFVVMAAADEAELRHMVRTAASYDDG 471

Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
           P+ FRYPRG  V  D+P  RG  +E+GKG+++ EG  VALL +G  +Q+CL A   L   
Sbjct: 472 PIAFRYPRGNGVGVDMP-ERGSVLELGKGRIIREGTKVALLSFGTRLQDCLVAAEELGAA 530

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 672
           G+  TVADARF KPLD  L+R L ++H  L+TVEEG++GGF SHV  F+A +GLL+SG+K
Sbjct: 531 GLSTTVADARFAKPLDQDLIRRLARSHEVLVTVEEGAVGGFASHVLQFLAHEGLLESGLK 590

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREA 716
            RP+VLPD + +HA P +  A AGL    I  T  + LG T  A
Sbjct: 591 VRPLVLPDTFTDHAKPEKMYADAGLDADGIVRTVFTALGHTAHA 634


>gi|298294378|ref|YP_003696317.1| deoxyxylulose-5-phosphate synthase [Starkeya novella DSM 506]
 gi|296930889|gb|ADH91698.1| deoxyxylulose-5-phosphate synthase [Starkeya novella DSM 506]
          Length = 640

 Score =  616 bits (1589), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 323/648 (49%), Positives = 420/648 (64%), Gaps = 32/648 (4%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD++  P  L+ L  ++L QLA E+R E+   VS T   L + L  VELTVALHHVF
Sbjct: 6   TPLLDMIREPADLRRLPEEQLAQLAAELREEMIDAVSVTGGHLGAGLGVVELTVALHHVF 65

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR  I TLR+  G+SG+T+R+ESEYDPF AGH   S+
Sbjct: 66  DTPNDRLIWDVGHQCYPHKILTGRRERIRTLRQGGGLSGFTNRAESEYDPFGAGHSSTSI 125

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVARD+ G +  +V VI +G   AG AYEAM+NAG +DS +IVILND+  S+ P
Sbjct: 126 SAGLGMAVARDLAGAQRNVVCVIGDGAMSAGMAYEAMNNAGAMDSRLIVILNDNDMSIAP 185

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                    + A+S+ L+R+ S  ++R LRE AK +T+ + R + + AA+ +E+ARG   
Sbjct: 186 P--------VGAMSAYLARLISGPTYRTLRETAKQLTRGLPRFLGKKAAQAEEFARGFW- 236

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR----RAED 374
             G TLFEELG YY+GP+DGHN++ L+ VL+ V      GPVLVHVVT++ +      E 
Sbjct: 237 -TGGTLFEELGFYYVGPIDGHNLDHLLPVLRNVRD-APTGPVLVHVVTQKGKGYPPAEES 294

Query: 375 TQKSEAIEK-------QQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAG 427
             K   +++       Q++ AS++          TY   F E+L+ EA +D+ IV V A 
Sbjct: 295 ADKYHGVQRFDVATGAQKKAASNAP---------TYTSVFAESLIDEARRDERIVAVTAA 345

Query: 428 MEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVN 487
           M     L LF + FPER FDVG+AEQHAVTF+AGLA  G KPFC I S FLQRAYDQ+V+
Sbjct: 346 MPAGTGLDLFGQAFPERTFDVGIAEQHAVTFAAGLATEGFKPFCAIYSTFLQRAYDQIVH 405

Query: 488 DVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVA 547
           DV  QRLPVRF +  AGLVG+DG T  GAFDI  ++ LP M+VMA +DE ELV MVAT A
Sbjct: 406 DVAIQRLPVRFALDRAGLVGADGATHVGAFDIPMLATLPGMVVMAAADEAELVHMVATAA 465

Query: 548 SIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARA 607
           + D+ P+ FRYPRG  V  + P + G+P+EIG+G+++ EG  VALL  G  +  CL A  
Sbjct: 466 AYDEGPIAFRYPRGEGVGVERPEH-GVPLEIGRGRIVREGSKVALLSLGTRLAACLAASE 524

Query: 608 LLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLL 667
            L+  G+  TVADARF KP+D +LV  L + H  L+ VEEG+ GGFGSHV   +A  G L
Sbjct: 525 QLAGFGLSTTVADARFAKPIDRELVLRLAREHEVLVIVEEGATGGFGSHVLTLLAEAGAL 584

Query: 668 DSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTRE 715
           D G+K R + LPD +IE  SP  QL  AGL    I     + LGR  E
Sbjct: 585 DRGLKVRCLALPDRFIEQDSPAAQLTEAGLDTDGIVRGVFAALGRADE 632


>gi|209963899|ref|YP_002296814.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodospirillum centenum
           SW]
 gi|226801550|sp|B6IRB5.1|DXS_RHOCS RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|209957365|gb|ACI98001.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodospirillum centenum
           SW]
          Length = 642

 Score =  615 bits (1587), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 318/639 (49%), Positives = 420/639 (65%), Gaps = 21/639 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V  P  L+ L   +L+Q A E+R+E  + VS T   L + L  VELTVALH+VF
Sbjct: 7   TPLLDTVNTPEDLRKLDPSQLRQFADELRTETINAVSVTGGHLGAGLGVVELTVALHYVF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+++WDVG Q Y HKILTGRR  I TLR   G+SG+T R+ESEYDPF AGH   S+
Sbjct: 67  NTPADRLIWDVGHQCYPHKILTGRRDRIRTLRMGGGLSGFTKRAESEYDPFGAGHSSTSI 126

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LGMAV RD  G +  ++ VI +G+  AG AYEAM+NAG ++S MIVILND+  S+ P
Sbjct: 127 SAALGMAVGRDQLGHKNHVICVIGDGSISAGMAYEAMNNAGAMNSRMIVILNDNDMSIAP 186

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                    + A+S  LSR+ SS+ +R LRE+ K + +R+ R + E A + +EYARG + 
Sbjct: 187 --------PVGAMSGYLSRLISSRQYRGLRELGKQVAERLPRPLQEAARRAEEYARGFV- 237

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G TLFEE+G YY+GP+DGHN++ L+ VL+ +      GPVL+H VT++ R     ++S
Sbjct: 238 -TGGTLFEEMGFYYVGPIDGHNLDHLLPVLENIRDDQGTGPVLIHAVTQKGRGYGPAERS 296

Query: 379 ----EAIEKQQ--EGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
                A+ K     GA         +Y+R     F ++L+ EAE D  +V + A M    
Sbjct: 297 ADKLHAVSKFDVITGAQAKAKANAPSYTR----VFADSLIQEAEADSRVVAITAAMPSGT 352

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            L LF+++FP+R +DVG+AEQHAVTF+AGLA  GLKPFC I S FLQRAYDQVV+DV  Q
Sbjct: 353 GLDLFEKRFPDRTYDVGIAEQHAVTFAAGLAAEGLKPFCAIYSTFLQRAYDQVVHDVCIQ 412

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
            LPVRF I  AGLVGSDG T  G+FD+ ++ C+PN+++MA +DE EL  MVAT A+ D  
Sbjct: 413 NLPVRFAIDRAGLVGSDGCTHAGSFDVAYLGCVPNIVIMAAADEAELKHMVATAAAYDHG 472

Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
           P+  RYPRG  V  ++P  RG  +EIGKG+++ EG  VA+L  G  ++  L A   L+  
Sbjct: 473 PIAVRYPRGEGVGLEMP-ERGQVLEIGKGRIVKEGTKVAILSLGTRLKEALLAAEDLNAR 531

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 672
           G+  TVADARF KP+D  L+R L Q+H  LITVEEGSIGGFGS+V HF+A  GLLD G+K
Sbjct: 532 GLSTTVADARFAKPIDEALIRRLAQDHEVLITVEEGSIGGFGSYVLHFLAQSGLLDQGLK 591

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
            RP+VLPD + +  +P +Q   AGL   HI  TAL  LG
Sbjct: 592 VRPMVLPDIFQDQDAPAKQYDEAGLNARHIVETALKALG 630


>gi|433776340|ref|YP_007306807.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mesorhizobium australicum
           WSM2073]
 gi|433668355|gb|AGB47431.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mesorhizobium australicum
           WSM2073]
          Length = 645

 Score =  615 bits (1587), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 325/643 (50%), Positives = 416/643 (64%), Gaps = 20/643 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V  P  L++L   +L QLA E+R EL   VS+T   L + L  VELTVALH+VF
Sbjct: 15  TPLLDRVRVPADLRTLAESDLPQLASELRLELIDAVSRTGGHLGAGLGVVELTVALHYVF 74

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+++WDVG Q Y HKILTGRR  I TLR++ G+SG+T R+ESEYDPF A H   S+
Sbjct: 75  NTPDDRLIWDVGHQAYPHKILTGRRDRIRTLRQEGGLSGFTRRAESEYDPFGAAHSSTSI 134

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMA ARD+ G R  +++VI +G   AG AYEAM+NAG LD+ +IVILND+  S+ P
Sbjct: 135 SAGLGMAAARDLSGGRNNVISVIGDGAMSAGMAYEAMNNAGALDARLIVILNDNDMSIAP 194

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S+ L+R+ S K++  LR+  K +T  +G+       +  E+ARG + 
Sbjct: 195 P--------TGAMSAYLARLASGKAYVGLRDFGKKLTSYLGKRADRAITRAVEHARGYV- 245

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G TLFEELG Y+IGP+DGHN+E LI VL+ V   G  GPVL+HVVT++ +       +
Sbjct: 246 -TGGTLFEELGFYHIGPIDGHNLEHLIPVLKNVRDNGK-GPVLIHVVTQKGK---GYAPA 300

Query: 379 EAIEKQQEGASDSNSLPFGNY-----SRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
           EA   +  G +  + +          +  Y   F E+L+ E  +D  IV V A M     
Sbjct: 301 EAAADKYHGVNKFDVITGAQAKAPANAPAYTKVFAESLIQEGREDDRIVAVTAAMPGGTG 360

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L LF E FP R FDVG+AEQHAVTF+AGLA  G KPF  I S FLQRAYDQVV+DV  Q+
Sbjct: 361 LDLFGEVFPSRTFDVGIAEQHAVTFAAGLATEGYKPFAAIYSTFLQRAYDQVVHDVAIQK 420

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPVRF I  AG VG+DG T CGAFD TF++ LP  +VMA +DE EL  MV T AS DD P
Sbjct: 421 LPVRFPIDRAGFVGADGATHCGAFDTTFLASLPGFVVMAAADEAELRHMVRTAASYDDGP 480

Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
           + FRYPRG  V  D+P  RG  +EIGKG+V+ EG  VALL +G  +Q+CL A   L   G
Sbjct: 481 IAFRYPRGNGVGVDMP-ERGSVLEIGKGRVVREGSKVALLSFGTRLQDCLIAAEELGAAG 539

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKW 673
           +  TVADARF KPLD  L+R L ++H  L+TVEEG+IGGF SHV  F+A +GLL+SG+K 
Sbjct: 540 LSTTVADARFAKPLDQDLIRRLARSHEVLVTVEEGAIGGFASHVLQFLAHEGLLESGLKV 599

Query: 674 RPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREA 716
           RP+VLPD++ +HA P +  A AGL    I  T  + LG T  A
Sbjct: 600 RPLVLPDDFTDHAKPEKMYADAGLDVAGIVRTVFTALGHTVRA 642


>gi|357385547|ref|YP_004900271.1| 1-deoxy-d-xylulose-5-phosphate synthase [Pelagibacterium
           halotolerans B2]
 gi|351594184|gb|AEQ52521.1| 1-deoxy-D-xylulose 5-phosphate synthase [Pelagibacterium
           halotolerans B2]
          Length = 647

 Score =  615 bits (1585), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 321/643 (49%), Positives = 423/643 (65%), Gaps = 21/643 (3%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           DK  TP+LD + +P  LK+L   EL +LA E+R+E+   VS T   L + L  VELTVAL
Sbjct: 3   DKPATPLLDTIGSPADLKALKRDELIELANELRAEVIDAVSVTGGHLGAGLGVVELTVAL 62

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           HH+F  P D+I++DVG Q Y HK+LTGRR+ I TLR+KDG+SG+T R ESEYDPF AGH 
Sbjct: 63  HHIFDTPNDRIIFDVGHQAYPHKVLTGRRNRIRTLRQKDGLSGFTKRGESEYDPFGAGHS 122

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SAGLGMAV  D+KG++  +V VI +G   AG AYEAM+NAG +D+ +IVILND+  
Sbjct: 123 STSISAGLGMAVGSDLKGEKRNVVAVIGDGAISAGMAYEAMNNAGAMDARLIVILNDNDM 182

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRI-GRGMHEWAAKVDEYA 313
           S+ P           A+S+ L+++ S  ++R LR+ AK     +    + + A K +EYA
Sbjct: 183 SIAPP--------TGAMSAYLAKLVSGPAYRGLRDAAKQFVDSVMPPFIKDKARKTEEYA 234

Query: 314 RGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAE 373
           RG     G TLFEELG YY+GP+DGHN++ L+ VL+ V      GP+L+HVVT++ +   
Sbjct: 235 RGFW--TGGTLFEELGFYYVGPIDGHNLDHLLPVLRNVRD-AETGPILIHVVTQKGKGYA 291

Query: 374 DTQKSEAIEKQQEGASDSNSLPFG-----NYSRTYDDCFIEALVMEAEKDKDIVVVHAGM 428
             ++S     +  G S  N +        + + +Y   F ++L+ EA+KD+ IV + A M
Sbjct: 292 PAEES---ADKYHGVSKFNVITGAQAKAPSNAPSYTSVFADSLIAEAQKDEAIVAITAAM 348

Query: 429 EMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVND 488
                +  F + FPER FDVG+AEQHAVTF+AGLA  GLKPFC I S FLQRAYDQVV+D
Sbjct: 349 PGGTGIDKFSKHFPERSFDVGIAEQHAVTFAAGLATEGLKPFCTIYSTFLQRAYDQVVHD 408

Query: 489 VDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVAS 548
           V  Q+LPVRF I  AG VG+DGPT  G+FDIT+++ LP+M+VMA  DE EL  MVAT A+
Sbjct: 409 VAIQKLPVRFPIDRAGYVGADGPTHAGSFDITYLATLPSMVVMAAGDEAELRHMVATAAA 468

Query: 549 IDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARAL 608
            DD P+ FRYPRG  V  ++P   G+P+ IGKG+VL EG  +ALL  G  +  C+ A   
Sbjct: 469 YDDGPIAFRYPRGEGVGVEMP-EAGVPLTIGKGRVLKEGTTIALLSLGTRLAECMAAAET 527

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLD 668
           L   G   TVADARF KPLD +L+  L + H  LITVEEG+IGGFGSHV+  +A  GLLD
Sbjct: 528 LGTYGFSTTVADARFAKPLDEELLARLAREHAVLITVEEGAIGGFGSHVATRMAQLGLLD 587

Query: 669 SGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
           +G+K+RP+++PD YIE A      A AGL    I ATAL+ LG
Sbjct: 588 NGLKFRPLLMPDRYIEQAGQGDMYAQAGLDRSGIVATALTALG 630


>gi|319784710|ref|YP_004144186.1| deoxyxylulose-5-phosphate synthase [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317170598|gb|ADV14136.1| deoxyxylulose-5-phosphate synthase [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 637

 Score =  615 bits (1585), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 324/643 (50%), Positives = 412/643 (64%), Gaps = 20/643 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD    P  L+ L   EL QLA E+R+EL   VS+T   L + L  VELTVALH+VF
Sbjct: 7   TPLLDKARIPADLRMLAESELPQLASELRAELVDAVSRTGGHLGAGLGVVELTVALHYVF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+++WDVG Q Y HKILTGRR  I TLR++ G+SG+T R+ESEYDPF A H   S+
Sbjct: 67  NTPDDRLIWDVGHQAYPHKILTGRRDRIRTLRQEGGLSGFTRRAESEYDPFGAAHSSTSI 126

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMA ARD+ G R  ++ VI +G   AG AYEAM+NAG LD+ +IVILND+  S+ P
Sbjct: 127 SAGLGMAAARDLSGGRNNVIAVIGDGAMSAGMAYEAMNNAGALDARLIVILNDNDMSIAP 186

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S+ L+R+ S K++  LR+  K +T  +G+       +  E+ARG + 
Sbjct: 187 P--------TGAMSAYLARLASGKAYIGLRDFGKKLTSYLGKRADRAITRAVEHARGYV- 237

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G TLFEELG Y+IGP+DGHN+E LI VL+ V   G  GPVL+HVVT++ +       +
Sbjct: 238 -TGGTLFEELGFYHIGPIDGHNLEHLIPVLKNVRDNGE-GPVLIHVVTQKGK---GYAPA 292

Query: 379 EAIEKQQEGASDSNSLPFGNY-----SRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
           EA   +  G +  + +          +  Y   F E+LV E  +D  IV V A M     
Sbjct: 293 EAAADKYHGVNKFDVITGAQAKAPANAPAYTKVFAESLVQEGREDDRIVAVTAAMPSGTG 352

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L LF E FP R FDVG+AEQHAVTF+AGLA  G KPF  I S FLQRAYDQVV+DV  Q+
Sbjct: 353 LDLFGEAFPSRTFDVGIAEQHAVTFAAGLATEGYKPFAAIYSTFLQRAYDQVVHDVAIQK 412

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPVRF I  AG VG+DG T CGAFD TF++ LP  +VMA +DE EL  MV T AS DD P
Sbjct: 413 LPVRFPIDRAGFVGADGATHCGAFDTTFLATLPGFVVMAAADEAELRHMVRTAASYDDGP 472

Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
           + FRYPRG  V  D+P  RG  +EIGKG+++ EG  VALL +G  +Q+CL A   L   G
Sbjct: 473 IAFRYPRGNGVGVDMP-ERGSVLEIGKGRIVREGTKVALLSFGTRLQDCLIAAEELGAAG 531

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKW 673
           +  TVADARF KPLD  L+R L ++H  L+TVEEG++GGF SHV  F+A +GLL+SG+K 
Sbjct: 532 LSTTVADARFAKPLDEDLIRRLARSHEVLVTVEEGAVGGFASHVLQFLAHEGLLESGLKV 591

Query: 674 RPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREA 716
           RP+VLPD + +HA P +  A AGL    I  T    LG T  A
Sbjct: 592 RPLVLPDAFTDHAKPEKMYADAGLDAAGIVRTVFVALGHTVRA 634


>gi|13476214|ref|NP_107784.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mesorhizobium loti
           MAFF303099]
 gi|21263539|sp|Q985Y3.1|DXS_RHILO RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|14026974|dbj|BAB53570.1| 1-D-deoxyxylulose 5-phosphate synthase [Mesorhizobium loti
           MAFF303099]
          Length = 637

 Score =  612 bits (1578), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 324/643 (50%), Positives = 414/643 (64%), Gaps = 20/643 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V  P  L++L   EL QLA E+R EL   VS+T   L + L  VELTVALH+VF
Sbjct: 7   TPLLDKVRIPADLRALDESELPQLASELRLELVDAVSRTGGHLGAGLGVVELTVALHYVF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+++WDVG Q Y HKILTGRR  I TLR++ G+SG+T R+ESEYDPF A H   S+
Sbjct: 67  NTPDDRLIWDVGHQAYPHKILTGRRDRIRTLRQEGGLSGFTRRAESEYDPFGAAHSSTSI 126

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMA ARD+ G R  ++ VI +G   AG AYEAM+NAG LD+ +IVILND+  S+ P
Sbjct: 127 SAGLGMAAARDLSGGRNNVIAVIGDGAMSAGMAYEAMNNAGALDARLIVILNDNDMSIAP 186

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S+ L+R+ S K++  LR+  K +T  +G+       +  E+ARG + 
Sbjct: 187 --------PTGAMSAYLARLASGKAYAGLRDFGKKLTSYLGKRADRAITRAVEHARGYV- 237

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G TLFEELG Y+IGP+DGHN+E LI VL+ V   G  GPVL+HVVT++ +       +
Sbjct: 238 -TGGTLFEELGFYHIGPIDGHNLEHLIPVLKNVRDNGE-GPVLIHVVTQKGK---GYAPA 292

Query: 379 EAIEKQQEGASDSNSLPFGNY-----SRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
           EA   +  G +  + +          +  Y   F E+L+ EA +D  IV V A M     
Sbjct: 293 EAAADKYHGVNKFDVITGAQAKAPANAPAYTKVFAESLIREAREDDRIVAVTAAMPSGTG 352

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L LF E FP R FDVG+AEQHAVTF+AGLA  G KPF  I S FLQRAYDQVV+DV  Q+
Sbjct: 353 LDLFGEVFPSRTFDVGIAEQHAVTFAAGLATEGYKPFAAIYSTFLQRAYDQVVHDVAIQK 412

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPVRF I  AG VG+DG T CGAFD TF++ LP  +VMA +DE EL  MV T A+ DD P
Sbjct: 413 LPVRFPIDRAGFVGADGATHCGAFDTTFLASLPGFVVMAAADEAELRHMVRTAAAYDDGP 472

Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
           + FRYPRG  V  D+P  RG  +E+GKG+V+ EG  VALL +G  +Q+CL A   L   G
Sbjct: 473 IAFRYPRGNGVGVDMP-ERGEVLELGKGRVVREGSKVALLSFGTRLQDCLIAAEELGAAG 531

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKW 673
           +  TVADARF KPLD  L+R L ++H  L+TVEEG+IGGF SHV  F+A +GLL+SG+K 
Sbjct: 532 LSTTVADARFAKPLDEDLIRRLARSHEVLVTVEEGAIGGFASHVLQFLAHEGLLESGLKV 591

Query: 674 RPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREA 716
           RP+VLPD + +HA P +  A AGL    I  T  + L  T  A
Sbjct: 592 RPLVLPDVFTDHAKPEKMYADAGLDAAGIVRTVFTALDHTARA 634


>gi|307941538|ref|ZP_07656893.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseibium sp. TrichSKD4]
 gi|307775146|gb|EFO34352.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseibium sp. TrichSKD4]
          Length = 639

 Score =  611 bits (1576), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 322/643 (50%), Positives = 412/643 (64%), Gaps = 22/643 (3%)

Query: 76  KEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALH 135
           K  TP+LD ++ P  ++SL+  EL QLA E+R+E    VS T   L + L  VELTVA+H
Sbjct: 4   KPHTPLLDQIKTPADMRSLSESELIQLADELRAETIDAVSMTGGHLGAGLGVVELTVAIH 63

Query: 136 HVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGC 195
           +VF+ P D+++WDVG Q Y HKILTGRR  I TLR+KDG+SG+T R ESEYDPF A H  
Sbjct: 64  YVFNTPEDRLIWDVGHQCYPHKILTGRRDRIRTLRQKDGLSGFTKRDESEYDPFGAAHSS 123

Query: 196 NSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHS 255
            S+SAGLGMAVARD+KG    ++ VI +G   AG AYEAM+NAG LDS +IVILND+  S
Sbjct: 124 TSISAGLGMAVARDLKGGDNNVIAVIGDGAMSAGMAYEAMNNAGSLDSRLIVILNDNDMS 183

Query: 256 LHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARG 315
           + P         + A+S+ L+++ S  +++ LR  AK   K   + + E AAK +EYARG
Sbjct: 184 IAP--------PVGAMSAYLAKLVSGPTYQSLRGAAKNFAKNFPKPLQEKAAKAEEYARG 235

Query: 316 MIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDT 375
                G TLFEE+G YY+GPVDGHN+E L+ +L+ V    + GPVL+H VT+   + +  
Sbjct: 236 FW--TGGTLFEEMGFYYVGPVDGHNLEHLLPILKNVRDTHN-GPVLIHAVTQ---KGKGY 289

Query: 376 QKSEAIEKQQEGASDSNSL------PFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGME 429
             +E  + +  G +  + +      P  N + +Y + F  +L+ EAE D  IV V A M 
Sbjct: 290 APAEGAKDKYHGVAKFDVITGKQAKPKAN-APSYTNVFATSLIKEAEHDDKIVTVTAAMP 348

Query: 430 MDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDV 489
               L LFQ+ FP+R FDVG+AEQH VTF+AGLA  G KPFC I S FLQRAYDQVV+DV
Sbjct: 349 DGTGLNLFQDAFPDRTFDVGIAEQHGVTFAAGLATEGYKPFCAIYSTFLQRAYDQVVHDV 408

Query: 490 DQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASI 549
             Q LPVRF I  AGLVG+DGPT  G+FD  +++CLPN +VMA +DE EL  MVAT A+ 
Sbjct: 409 AIQNLPVRFPIDRAGLVGADGPTHAGSFDTAYLACLPNFVVMAAADEVELRHMVATAAAY 468

Query: 550 DDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALL 609
           DD P+ FRYPRG  V  D+P  RG  +EIGKG V  EG  VAL  +G  +  CLKA   L
Sbjct: 469 DDGPISFRYPRGEGVGLDMP-ERGSVLEIGKGVVRKEGSKVALFSFGTRMAECLKAAEEL 527

Query: 610 SKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDS 669
              G+  TVADARF KPLD+ L+  L + H  L+TVEEGS+GGFGSHV   +A  G LD 
Sbjct: 528 DIAGLSTTVADARFAKPLDVDLLLRLAREHEVLVTVEEGSVGGFGSHVLGMLAQHGALDK 587

Query: 670 GVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
           G+K R + LPD YI+   P      AGL+   I  T    LGR
Sbjct: 588 GLKIRTLCLPDRYIDQGKPDGMYEEAGLSAAGIMKTVFEALGR 630


>gi|389876824|ref|YP_006370389.1| deoxyxylulose-5-phosphate synthase [Tistrella mobilis KA081020-065]
 gi|388527608|gb|AFK52805.1| deoxyxylulose-5-phosphate synthase [Tistrella mobilis KA081020-065]
          Length = 645

 Score =  611 bits (1575), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 318/644 (49%), Positives = 417/644 (64%), Gaps = 22/644 (3%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           D+  TP+LD V  P  ++     +L+QLA E+R+E  S VS T   L + L  VEL+VA+
Sbjct: 3   DRPSTPLLDTVRVPADIRGFNRDQLRQLADELRAETVSAVSVTGGHLGAGLGVVELSVAI 62

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           HHVF  P D+++WDVG Q Y HKILTGRR  I TLR+KDG+SG+T R ESEYDPF A H 
Sbjct: 63  HHVFDTPRDRLIWDVGHQCYPHKILTGRRERIRTLRQKDGLSGFTKRDESEYDPFGAAHS 122

Query: 195 CNSVSAGLGMAVARDIKGKREC-IVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSR 253
             S+SAGLGMAVA  +KG+ E  ++ VI +G   AG AYEAM+NAG +   +IVILND+ 
Sbjct: 123 STSISAGLGMAVASRLKGEEERRVIAVIGDGAMSAGMAYEAMNNAGAMPDRLIVILNDND 182

Query: 254 HSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYA 313
            S+ P           A+S+ LSR+ SS+S+R LR++AK M +   + + + A + +E+A
Sbjct: 183 MSIAPPT--------GAMSAYLSRLISSRSYRSLRDIAKQMARVFPKPLEQAARRAEEFA 234

Query: 314 RGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR--- 370
           RG++   G TLFEELG YY+GP+DGHN++ L+ VL  V      GPVL+H+VT++ +   
Sbjct: 235 RGLV--TGGTLFEELGFYYVGPIDGHNLDHLLPVLLNVRDADQDGPVLIHIVTQKGKGYP 292

Query: 371 ---RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAG 427
              +A D     A      GA    +    +Y+  Y D    AL+ EAE D  ++ V A 
Sbjct: 293 PAEKAADKYHGVAKFDVVTGAQVKPAAGAPSYTNVYAD----ALIAEAEHDPRVLAVTAA 348

Query: 428 MEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVN 487
           M     L  F  +FP+R FDVG+AEQHAVTF+AGLA  G+KPF  I S FLQRAYDQVV+
Sbjct: 349 MPTGTGLDRFGRRFPDRVFDVGIAEQHAVTFAAGLAAEGMKPFATIYSTFLQRAYDQVVH 408

Query: 488 DVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVA 547
           DV  QRLPVRF I  AGLVG+DG T  G+FD+T++ CLP+ +VMAP+DE EL+ MVAT A
Sbjct: 409 DVAIQRLPVRFAIDRAGLVGADGATHMGSFDLTYLCCLPDFVVMAPADEAELMHMVATAA 468

Query: 548 SIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARA 607
            IDDRP   RYPRG  +   LP  RG P+EIG+G++L EG  VA+L  G+ V + LKA  
Sbjct: 469 QIDDRPSAVRYPRGEGLGVPLPA-RGTPLEIGRGRILREGTKVAILALGSRVADALKAGE 527

Query: 608 LLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLL 667
            L+  G   TVADARF KP+D  LVR L   H  LIT+EE +IGGF S V+  +    L+
Sbjct: 528 ELTARGYSTTVADARFAKPIDADLVRRLASEHEVLITIEENAIGGFASQVTQLLCDGALI 587

Query: 668 DSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
           + G+K RP++LPD +I+HASP  Q+ +AGL    I A AL  LG
Sbjct: 588 ERGLKLRPMMLPDLFIDHASPRDQVEMAGLGVQAIVAKALEALG 631


>gi|338739777|ref|YP_004676739.1| 1-deoxy-D-xylulose-5-phosphate synthase [Hyphomicrobium sp. MC1]
 gi|337760340|emb|CCB66171.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein,
           thiamin-binding [Hyphomicrobium sp. MC1]
          Length = 635

 Score =  610 bits (1574), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 316/640 (49%), Positives = 413/640 (64%), Gaps = 22/640 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD +  P  L+ L+  +L QLA E+R E+   VS T   L + L  +ELTVALH VF
Sbjct: 4   TPLLDKIATPHELRQLSEDQLPQLAAELRDEMIDAVSVTGGHLGAGLGVIELTVALHWVF 63

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+++WDVG Q Y HKILTGRR  I TLR+  G++G+T+R ES YDPF AGH   S+
Sbjct: 64  NTPDDRLIWDVGHQAYPHKILTGRRDRIRTLRQPGGLAGFTNREESVYDPFGAGHSSTSI 123

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LGMAVARD+ GK   +V VI +G   AG AYEA++NAG  +  +IV+LND+  S+ P
Sbjct: 124 SAALGMAVARDLTGKSNNVVAVIGDGAMSAGMAYEAINNAGARNERLIVVLNDNDMSIAP 183

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      ALS+ L+R+ SS ++  LR+ AK + K + +     AA+V+EY R +  
Sbjct: 184 --------PTGALSAYLARVTSSGTYVHLRDYAKQLAKMLPKAWERRAARVEEYTRHLW- 234

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
            QG   FEELG YY+GP+DGHN E L+ VL+ V  L   GP+LVHVVT++ +       +
Sbjct: 235 -QGGAWFEELGFYYVGPIDGHNFEQLLPVLKNVRDL-EQGPILVHVVTQKGK---GYAPA 289

Query: 379 EAIEKQQEGASDSNSL------PFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
           EA   +  G +  N +      P  N + +Y   F ++L+ EA KDK +V + A M    
Sbjct: 290 EASPDKYHGVNKFNVVTGAQDKPKPN-APSYTKVFADSLIAEARKDKRVVAITAAMPSGT 348

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            L  F ++FP+R FDVG+AEQHAVTF+AGLA  G KPF  I S FLQRAYDQVV+DV  Q
Sbjct: 349 GLDYFGKEFPDRTFDVGIAEQHAVTFAAGLAAEGYKPFTAIYSTFLQRAYDQVVHDVAIQ 408

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
           +LPVRF I  AGLVG+DG T  G+FD+ +++CLP+ ++MA +DE ELV MVAT A IDDR
Sbjct: 409 KLPVRFAIDRAGLVGADGATHAGSFDVAYLACLPDFVIMAAADEAELVHMVATQAQIDDR 468

Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
           P   RYPRG  V  +LP   GIP+EIGKG+++ +G  VALL  G  +  CLKA   L+  
Sbjct: 469 PSALRYPRGEGVGVELPA-EGIPLEIGKGRIVRQGSKVALLSLGTRLAECLKAADQLASF 527

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 672
           G+  TVADARF KPLD  L+R+L  NH  L+TVEEGSIGGFGSHV  F++ +GLLD G++
Sbjct: 528 GLSTTVADARFAKPLDEALIRDLATNHEVLVTVEEGSIGGFGSHVLQFLSNEGLLDRGLR 587

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
            RP VLPD +I+H  P      A L    I  T  + LGR
Sbjct: 588 VRPKVLPDVFIDHGKPEAMYEAARLNASGIVETVFAALGR 627


>gi|288961626|ref|YP_003451936.1| 1-deoxy-D-xylulose-5-phosphate synthase [Azospirillum sp. B510]
 gi|288913906|dbj|BAI75392.1| 1-deoxy-D-xylulose-5-phosphate synthase [Azospirillum sp. B510]
          Length = 637

 Score =  609 bits (1570), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 322/637 (50%), Positives = 419/637 (65%), Gaps = 17/637 (2%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LDL   P +L++L  ++L+Q A E+R+E    VS T   L + L  VELTVALH+VF
Sbjct: 6   TPLLDLCPTPAKLRALKPEQLRQFADELRTETVDAVSVTGGHLGAGLGVVELTVALHYVF 65

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR  I TLR   G+SG+T RSES++DPF AGH   S+
Sbjct: 66  DTPYDRLIWDVGHQCYPHKILTGRRDRIRTLRMGGGLSGFTKRSESDHDPFGAGHSSTSI 125

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVA  +KG+R  ++ VI +G   AG AYEAM+NA    S +IVILND+  S+ P
Sbjct: 126 SAGLGMAVASKMKGERRNVIAVIGDGAMSAGMAYEAMNNAASTKSRLIVILNDNDMSIAP 185

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                    + A+S+ LSR+ SSK +  LR +AK +  ++ R +   A + +EYARGM+ 
Sbjct: 186 --------PVGAMSAYLSRLISSKPYLSLRHLAKEIADQLPRPLRNAARRAEEYARGMV- 236

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR----RAED 374
             G TLFEELG YYIGP+DGHN++ L+ VLQ V       PVL+HVVT++ +      E 
Sbjct: 237 -TGGTLFEELGFYYIGPIDGHNLDHLLPVLQNVRDADDDKPVLIHVVTKKGKGYGPAEES 295

Query: 375 TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
             K  A+ K  +  + + S P  N + TY   F ++L+ EA  D  IV + A M     L
Sbjct: 296 ADKLHAVAK-FDVVTGTQSKPKSN-APTYTRVFAQSLIAEAAADPSIVGITAAMPSGTGL 353

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
            LF E+FP+R FDVG+AEQHAVTF+AG+A  G KPFC I S FLQRAYDQV++DV  Q L
Sbjct: 354 DLFGERFPDRCFDVGIAEQHAVTFAAGMATEGFKPFCAIYSTFLQRAYDQVIHDVVLQHL 413

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PVRF +  AGLVG+DG T  G+FD  ++ CLP++++MA +DE EL+ MVAT A+IDDR  
Sbjct: 414 PVRFALDRAGLVGADGATHAGSFDTAYLGCLPDIVLMAAADELELMHMVATQAAIDDRAS 473

Query: 555 CFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGI 614
             RYPRG  V  +LP  RG  + IGKG++L EG  +A+L YG  +    +A A L+  G+
Sbjct: 474 ALRYPRGEGVGLELP-ERGGLLPIGKGRILQEGTKIAILSYGTRLGEARRAAAELAARGL 532

Query: 615 DVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWR 674
             T+ADARF KPLD  LVR L   H  LIT+EEGS+GGFGS V  F+A+ GLLD G+K R
Sbjct: 533 STTLADARFAKPLDEDLVRRLALEHEVLITIEEGSVGGFGSFVLQFLAMAGLLDGGLKIR 592

Query: 675 PIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
           P+VLPD Y++H SP +Q   AGLT  HI  TAL  LG
Sbjct: 593 PMVLPDLYLDHDSPAKQYEAAGLTAQHIVRTALQALG 629


>gi|163842716|ref|YP_001627120.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella suis ATCC 23445]
 gi|189027769|sp|B0CKC0.1|DXS_BRUSI RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|163673439|gb|ABY37550.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella suis ATCC 23445]
          Length = 643

 Score =  608 bits (1568), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 319/640 (49%), Positives = 411/640 (64%), Gaps = 22/640 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD    P RL++L  ++L QLA E+R+EL   VS T   L + L  VELTVALHHVF
Sbjct: 6   TPLLDKAPTPDRLRALPEQDLPQLAEELRTELIDAVSTTGGHLGAGLGVVELTVALHHVF 65

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+I+WDVG Q Y HKILTGRR  I TLR+  G+SG+T R+ESEYDPF A H   S+
Sbjct: 66  NTPYDRIIWDVGHQAYPHKILTGRRDRIRTLRQAGGLSGFTKRAESEYDPFGAAHSSTSI 125

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVA ++ G++  ++ VI +G+  AG AYEAM+NAG LD+ +IVILND+  S+ P
Sbjct: 126 SAGLGMAVASELSGEKRNVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAP 185

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S+ L+R+ S +++R +RE AK + +++ + + + A K +EYAR    
Sbjct: 186 --------PTGAMSAYLARLVSGRTYRSVREAAKQVAQKLPKFLQDKARKSEEYARAFF- 236

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G TLFEELG YY+GP+DGHN++ L+ VL+ V      GPVL+HVVT++ +       +
Sbjct: 237 -TGGTLFEELGFYYVGPIDGHNLDHLLPVLKNVRDT-QKGPVLIHVVTQKGK---GYAPA 291

Query: 379 EAIEKQQEGASDSNSL------PFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
           EA   +  G +  + +      P  N + +Y   F  +L+ EA  D  IV V A M    
Sbjct: 292 EAAADKYHGVNKFDVITGKQAKPPAN-APSYTKIFGTSLIEEARHDDKIVAVTAAMPTGT 350

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            L LF E FP+R FDVG+AEQHAVTF+AGLA  G KPFC I S FLQR YDQVV+DV  Q
Sbjct: 351 GLDLFGEAFPKRVFDVGIAEQHAVTFAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQ 410

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
            LPVRF I  AGLVG+DGPT  G+FD  F++ LP  +VMA SDE EL  MV T A  D+ 
Sbjct: 411 NLPVRFPIDRAGLVGADGPTHAGSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEG 470

Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
           P+ FRYPRG  V  DLP  RG  +EIGKG+++ EG  VALL +G  +Q CL A   L   
Sbjct: 471 PISFRYPRGDGVGVDLP-ERGSVLEIGKGRIVREGTKVALLSFGTRLQECLAAAEELGAT 529

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 672
           G+  TVADARF KPLD  L+R L + H  L+ VEEG++GGFGSHV  F+A DGLLD G+K
Sbjct: 530 GLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFGSHVLQFLATDGLLDRGLK 589

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
            R + LPD Y +H  P    A AGL    I  T  + L R
Sbjct: 590 VRALTLPDIYQDHGKPDAMYAEAGLDRTGIVRTVFAALHR 629


>gi|110633092|ref|YP_673300.1| 1-deoxy-D-xylulose-5-phosphate synthase [Chelativorans sp. BNC1]
 gi|118595588|sp|Q11KE0.1|DXS_MESSB RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|110284076|gb|ABG62135.1| 1-deoxy-D-xylulose-5-phosphate synthase [Chelativorans sp. BNC1]
          Length = 650

 Score =  608 bits (1568), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 311/645 (48%), Positives = 425/645 (65%), Gaps = 24/645 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+L+ V  P  LK +  ++L QLA E+R+E+   VS+T   L + L  VELTVALH++F
Sbjct: 20  TPLLNRVRFPSDLKQIPEEDLPQLAEELRAEMIDAVSQTGGHLGAGLGVVELTVALHYIF 79

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR  I TLR++DG+SG+T RSESEYDPF A H   S+
Sbjct: 80  DTPHDRLIWDVGHQAYPHKILTGRRDRIRTLRQEDGLSGFTKRSESEYDPFGAAHSSTSI 139

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVAR++ G +  ++ VI +G   AG AYEAM+NAG LD+ +IVILND+  S+ P
Sbjct: 140 SAGLGMAVARELSGGQRHVIAVIGDGALSAGMAYEAMNNAGALDARLIVILNDNDMSIAP 199

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S+ L+R+ S +++R +R+V K +T  +G+       +  E+ARG + 
Sbjct: 200 --------PTGAMSTYLARLASGRAYRGIRDVGKKLTSHLGKSFDRAITRAVEHARGFV- 250

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G TLFEE+G ++IGP+DGH++E L+ VL+ V   G+ GPVL+HVVT++ +       +
Sbjct: 251 -TGGTLFEEMGFFHIGPIDGHDLEALVPVLRNVRDNGT-GPVLIHVVTQKGK---GYPPA 305

Query: 379 EAIEKQQEGASDSNSL-------PFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMD 431
           EA   +  G +  + +       P G  + +Y   F +ALV EA +DK IV + A M   
Sbjct: 306 EAAADKYHGVAKFDVITGAQAKSPAG--APSYTKVFAQALVQEAREDKRIVAITAAMPSG 363

Query: 432 LSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQ 491
             L LF+++FP+R FDVG+AEQHAVTF+AGLA  G +PF  I S FLQRAYDQVV+DV  
Sbjct: 364 TGLDLFEKEFPDRSFDVGIAEQHAVTFAAGLATEGYRPFAAIYSTFLQRAYDQVVHDVAI 423

Query: 492 QRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDD 551
           Q LPVRF I  AG VG+DG T CGAFD+ +++ LPNM+VMA +DE EL  MV T A  D+
Sbjct: 424 QNLPVRFAIDRAGFVGADGATHCGAFDVAYLATLPNMVVMAAADEAELKHMVRTAADHDE 483

Query: 552 RPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSK 611
            P+ FRYPRG      LP  RG  ++IGKG+++ EG  +ALL  G  + +C+ A   L  
Sbjct: 484 GPIAFRYPRGEGTGVPLP-QRGEILKIGKGRIVREGSKIALLSLGTRLADCMIAAEELEA 542

Query: 612 LGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGV 671
            G+  TVADARF KPLD  L+R L + H  L+TVEEGSIGGFG+HV HF+A +GLL++G+
Sbjct: 543 AGLSTTVADARFAKPLDADLIRRLAREHEVLVTVEEGSIGGFGAHVLHFLAHEGLLENGL 602

Query: 672 KWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREA 716
           K RP+V+PD +++ A P +  A AGL    I  T  + LG+  +A
Sbjct: 603 KVRPLVMPDIFMDQAKPEKMYAKAGLDAAGIVKTVFAALGQAEQA 647


>gi|316932492|ref|YP_004107474.1| deoxyxylulose-5-phosphate synthase [Rhodopseudomonas palustris
           DX-1]
 gi|315600206|gb|ADU42741.1| deoxyxylulose-5-phosphate synthase [Rhodopseudomonas palustris
           DX-1]
          Length = 641

 Score =  608 bits (1567), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 316/642 (49%), Positives = 424/642 (66%), Gaps = 17/642 (2%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD +  P  L+ L I +++Q+A E+R E    VS T     + L  VELT ALH+VF
Sbjct: 7   TPLLDTIRTPEDLRKLRIDQVRQVADELRLETIDAVSVTGGHFGAGLGVVELTTALHYVF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR  I TLR   G+SG+T R+ES++DPF AGH   S+
Sbjct: 67  DTPRDRLIWDVGHQAYPHKILTGRRDRIRTLRTGGGLSGFTKRTESDHDPFGAGHSSTSI 126

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVA ++ GK+  ++ VI +G+  AG AYEAM+NAG ++S +IVILND+  S+ P
Sbjct: 127 SAGLGMAVASELAGKKNNVIAVIGDGSISAGMAYEAMNNAGAMNSRLIVILNDNNMSIAP 186

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARG-MI 317
                    + A+S+ LSR+ S K++R LRE  K + K + + + + AA+ +EY+RG M+
Sbjct: 187 --------PVGAMSAYLSRLYSGKTYRSLREAGKQIGKHLPKLIADRAARAEEYSRGFMM 238

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRR---AED 374
           G  G TLFEELG YY+GPVDGHN++ L+ +LQ V      GP L+HVVT++ +    AE 
Sbjct: 239 G--GGTLFEELGFYYVGPVDGHNLDHLLPILQNVRD-ADTGPFLIHVVTQKGKGYGPAEA 295

Query: 375 TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
                    + + A+ + S    N + +Y + F ++LV EAEKD  IV + A M     +
Sbjct: 296 AADKYHAVVKFDIATGAQSKAKSN-APSYQNVFGQSLVKEAEKDDKIVGITAAMPSGTGI 354

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
            +F++ FP+R FDVG+AEQHAVTF+AGLA  G KPFC I S FLQRAYDQ+V+DV  Q+L
Sbjct: 355 DIFEKAFPKRTFDVGIAEQHAVTFAAGLATEGYKPFCAIYSTFLQRAYDQIVHDVAIQKL 414

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PVRF I  AGLVG+DG T  G+FD  ++ CLPNM++MA +DE ELV MVAT  +IDDRP 
Sbjct: 415 PVRFAIDRAGLVGADGATHAGSFDNAYLGCLPNMVIMAAADEAELVHMVATQVAIDDRPS 474

Query: 555 CFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGI 614
             RYPRG     ++P   G+P+EIGKG+V+ +G  VALL +G  +    KA   L+ LG+
Sbjct: 475 AVRYPRGEGRGVEMPDV-GVPLEIGKGRVIRQGNKVALLSFGTRLAEAEKAADELATLGL 533

Query: 615 DVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWR 674
             TVADARF KPLDI+LV +L ++H  LITVEEGSIGGFGSHV   +A  G+LD  VK R
Sbjct: 534 STTVADARFMKPLDIELVLKLARDHEVLITVEEGSIGGFGSHVMQALAEHGMLDGQVKMR 593

Query: 675 PIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREA 716
            +VLPD +++H +PT   A AGL    I      +LG   +A
Sbjct: 594 SLVLPDVFMDHDNPTAMYARAGLDAKAIVKKVFDVLGNDAKA 635


>gi|374293689|ref|YP_005040712.1| 1-deoxy-D-xylulose-5-phosphate synthase [Azospirillum lipoferum 4B]
 gi|357427092|emb|CBS90030.1| 1-deoxy-D-xylulose 5-phosphate synthase [Azospirillum lipoferum 4B]
          Length = 637

 Score =  607 bits (1566), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 324/637 (50%), Positives = 419/637 (65%), Gaps = 17/637 (2%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LDL   P +L++L  ++L+Q A E+R+E    VS T   L + L  VELTVALH+VF
Sbjct: 6   TPLLDLCPTPAKLRALKPEQLRQFADELRTETVDAVSVTGGHLGAGLGVVELTVALHYVF 65

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR  I TLR   G+SG+T RSESEYDPF AGH   S+
Sbjct: 66  DTPYDRLIWDVGHQCYPHKILTGRRDRIRTLRMGGGLSGFTKRSESEYDPFGAGHSSTSI 125

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVA  IKG++  ++ VI +G+  AG AYEAM+NA    S +IVILND+  S+ P
Sbjct: 126 SAGLGMAVASRIKGEQRNVIAVIGDGSMSAGMAYEAMNNAASTKSRLIVILNDNDMSIAP 185

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                    + A+S+ LSR+ SSK +  LR +AK +  ++ R +   A + +EYARGM+ 
Sbjct: 186 P--------VGAMSAYLSRLISSKPYLSLRHLAKEIADQLPRPLRNAARRAEEYARGMV- 236

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR----RAED 374
             G TLFEELG YYIGP+DGHN++ L+ VLQ V       PVL+HVVT++ +      E 
Sbjct: 237 -TGGTLFEELGFYYIGPIDGHNLDHLLPVLQNVRDADDDKPVLIHVVTKKGKGYGPAEES 295

Query: 375 TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
             K  A+ K  +  + + S P  N + TY   F ++L+ EA  D  IV + A M     L
Sbjct: 296 ADKLHAVAK-FDVVTGTQSKPKSN-APTYTRVFAQSLIAEAAADPSIVGITAAMPSGTGL 353

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
            LF E+FP+R FDVG+AEQHAVTF+AG+A  G KPFC I S FLQRAYDQV++DV  Q L
Sbjct: 354 DLFGERFPDRCFDVGIAEQHAVTFAAGMATEGFKPFCAIYSTFLQRAYDQVIHDVVLQHL 413

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PVRF +  AGLVG+DG T  G+FD  ++ CLP++++MA +DE EL+ MVAT A+IDDR  
Sbjct: 414 PVRFALDRAGLVGADGATHAGSFDTAYLGCLPDIVLMAAADELELMHMVATQAAIDDRAS 473

Query: 555 CFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGI 614
             RYPRG  V  +LP  RG  + IGKG++L EG  +A+L YG  +    +A A L+  G+
Sbjct: 474 ALRYPRGEGVGLELPD-RGSILPIGKGRILQEGTKIAILSYGTRLGEGRRAAAELAARGL 532

Query: 615 DVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWR 674
             T+ADARF KPLD  LVR L   H  LIT+EEGS+GGFGS V  F+A  GLLD G+K R
Sbjct: 533 STTLADARFAKPLDEDLVRRLALEHEVLITIEEGSVGGFGSFVLQFLATAGLLDGGLKIR 592

Query: 675 PIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
           P+VLPD Y++H SP +Q   AGLT  HI  TAL  LG
Sbjct: 593 PMVLPDLYLDHDSPAKQYEAAGLTAQHIVRTALQALG 629


>gi|296533687|ref|ZP_06896241.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseomonas cervicalis ATCC
           49957]
 gi|296265986|gb|EFH12057.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseomonas cervicalis ATCC
           49957]
          Length = 650

 Score =  607 bits (1565), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 317/644 (49%), Positives = 412/644 (63%), Gaps = 23/644 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V  P  L++ +  +LKQLA E+R+E    VS+T   L +SL  VELTVA+H VF
Sbjct: 9   TPLLDRVRIPADLRNFSADQLKQLAAELRAETVHAVSQTGGHLGASLGVVELTVAIHAVF 68

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG QTY HKILTGRR  I TLR+  G+SG+T RSESEYDPF A H   S+
Sbjct: 69  DTPRDRLIWDVGHQTYPHKILTGRRDRIRTLRQGGGLSGFTRRSESEYDPFGAAHSSTSI 128

Query: 199 SAGLGMAVARDIKGKR-------ECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILND 251
           SAGLGMAVARD+K            ++ VI +G   AG AYEAM+NAG + S +IV+LND
Sbjct: 129 SAGLGMAVARDLKRAMPGEPRDDRNVIAVIGDGAMSAGMAYEAMNNAGAMRSRLIVVLND 188

Query: 252 SRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDE 311
           +  S+ P +         A+S+ LSR+ SS+ F  LRE+   + +R    +   A + DE
Sbjct: 189 NDMSIAPPV--------GAMSAYLSRLISSRPFLSLREMMAKLARRFPAPLERAARRADE 240

Query: 312 YARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRR 371
           YARG++   G TLFEELG YY+GP+DGH+++ L+ VL+ +       PVL+HVVT++ + 
Sbjct: 241 YARGLL--TGGTLFEELGFYYVGPIDGHSLDHLLPVLRNLRDAEDGAPVLLHVVTQKGKG 298

Query: 372 AEDTQ----KSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAG 427
               +    K  A+ K           P G    TY   F +AL+ EAE D  IV V A 
Sbjct: 299 YAPAEASADKYHAVAKFNVVTGTQAKAPPG--PPTYTKVFSQALIAEAEADPRIVAVTAA 356

Query: 428 MEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVN 487
           M     L  FQ++FP+R +DVG+AEQHAVTF+AGLA  G+KPF  I S FLQRAYDQV++
Sbjct: 357 MPSGTGLDAFQKRFPKRTYDVGIAEQHAVTFAAGLATEGIKPFVAIYSTFLQRAYDQVMH 416

Query: 488 DVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVA 547
           DV  Q LPVRF +  AGLVG+DG T  GA+DI ++ CLP M++MAPSDE EL  MVAT A
Sbjct: 417 DVALQNLPVRFALDRAGLVGADGATHAGAYDIAYLGCLPQMVLMAPSDEVELAHMVATSA 476

Query: 548 SIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARA 607
           + D+ P+ FR+PRG          RG  +EIG+G+VL EG  VALL YGA +Q CLKA  
Sbjct: 477 AYDEGPIAFRFPRGEGFGLQPVPARGEVMEIGRGRVLREGTKVALLSYGARLQECLKAAE 536

Query: 608 LLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLL 667
            L+  G+  TVADARF KPLD  LV  L + H  ++T+EEGS+GGFG+ V H +AL G  
Sbjct: 537 ELAARGLSCTVADARFAKPLDTALVERLAREHEVMVTIEEGSVGGFGALVMHHLALRGAF 596

Query: 668 DSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
           D G+++RP+ LPD YI+H  P +Q A AGL    I AT  + LG
Sbjct: 597 DHGLRFRPMALPDRYIDHDKPERQYAEAGLDAAAIVATVGAALG 640


>gi|239831304|ref|ZP_04679633.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ochrobactrum intermedium
           LMG 3301]
 gi|444308786|ref|ZP_21144428.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ochrobactrum intermedium
           M86]
 gi|239823571|gb|EEQ95139.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ochrobactrum intermedium
           LMG 3301]
 gi|443487834|gb|ELT50594.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ochrobactrum intermedium
           M86]
          Length = 638

 Score =  606 bits (1563), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 321/644 (49%), Positives = 408/644 (63%), Gaps = 30/644 (4%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD    P  L++L   +L QLA E+R+EL  +VS T   L + L  VELTVALHHVF
Sbjct: 6   TPLLDKAPIPEALRALPESDLPQLAQELRAELIDVVSTTGGHLGAGLGVVELTVALHHVF 65

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+I+WDVG Q Y HKILTGRR  I TLR+  G+SG+T RSESEYDPF A H   S+
Sbjct: 66  DTPHDRIIWDVGHQAYPHKILTGRRDRIRTLRQTGGLSGFTKRSESEYDPFGAAHSSTSI 125

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVA D+ G++  ++ VI +G+  AG AYEAM+NAG LD+ +IVILND+  S+ P
Sbjct: 126 SAGLGMAVASDLSGEKRNVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAP 185

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S+ L+R+ S K++R +RE AK + K++ + + + A K +EYAR    
Sbjct: 186 --------PTGAMSAYLARLVSGKTYRSVREAAKQVAKKLPKFLQDKARKSEEYARAFF- 236

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR-------- 370
             G TLFEELG YY+GP+DGHN++ L+ +L+ V      GPVL+HVVT++ +        
Sbjct: 237 -TGGTLFEELGFYYVGPIDGHNLDHLLPILKNVRDT-QEGPVLIHVVTQKGKGYPPAEAA 294

Query: 371 --RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGM 428
             +     K + I  QQ       S P  N + +Y   F  +L+ EA  D  IV + A M
Sbjct: 295 ADKYHGVNKFDVITGQQ-------SKPPAN-APSYTKIFGTSLIEEARHDDKIVAITAAM 346

Query: 429 EMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVND 488
                L LF E FP+R FDVG+AEQHAVTF+AGLA  G KPFC I S FLQR YDQVV+D
Sbjct: 347 PSGTGLDLFGEVFPQRTFDVGIAEQHAVTFAAGLASEGFKPFCAIYSTFLQRGYDQVVHD 406

Query: 489 VDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVAS 548
           V  Q LPVRF I  AGLVG+DGPT  G+FD  F+S LP  +VMA SDE EL  MV T A 
Sbjct: 407 VSIQNLPVRFPIDRAGLVGADGPTHAGSFDTGFLSALPGFVVMAASDEAELRHMVRTAAE 466

Query: 549 IDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARAL 608
            ++ P+ FRYPRG  V  DLP  RG  +EIGKG+++ EG  VALL +G  +Q CL A   
Sbjct: 467 YNEGPISFRYPRGDGVGVDLP-ERGQLLEIGKGRIVREGTKVALLSFGTRLQECLAAADE 525

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLD 668
           L   G+  TVADARF KPLD  L+R L + H  L+ VEEG++GGF SHV  F+A DGLLD
Sbjct: 526 LGAAGLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFASHVLQFLATDGLLD 585

Query: 669 SGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
            G+K R + LPD+Y +H  P    A AGL    I     + LGR
Sbjct: 586 RGLKVRALTLPDSYQDHGKPDAMYAEAGLDRAGIVQAVFAALGR 629


>gi|27377762|ref|NP_769291.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bradyrhizobium japonicum
           USDA 110]
 gi|41016964|sp|Q89RW1.1|DXS_BRAJA RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|27350907|dbj|BAC47916.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bradyrhizobium japonicum
           USDA 110]
          Length = 661

 Score =  606 bits (1563), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 308/640 (48%), Positives = 419/640 (65%), Gaps = 20/640 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD +  P  L+ L I++++Q+A E+R E    VS T     + L  VELT A+H+VF
Sbjct: 26  TPLLDTIRTPDDLRKLKIEQVRQVADELRQETIDAVSVTGGHFGAGLGVVELTTAIHYVF 85

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR  I TLR   G+SG+T RSES+YDPF A H   S+
Sbjct: 86  DTPRDRLIWDVGHQAYPHKILTGRRDRIRTLRTGGGLSGFTKRSESDYDPFGAAHSSTSI 145

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVARD+ G +  ++ VI +G   AG AYEAM+NAG ++S +IVILND+  S+ P
Sbjct: 146 SAGLGMAVARDLSGGKNNVIAVIGDGAMSAGMAYEAMNNAGAMNSRLIVILNDNDMSIAP 205

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                    + A+S+ LSR+ S K++R LRE AK + KR+ + +   A +V+EY+RG + 
Sbjct: 206 --------PVGAMSAYLSRLYSGKTYRTLREAAKQINKRLPKIIANRANRVEEYSRGFM- 256

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR-----RAE 373
             G TLFEELG YY+GP+DGHN++ L+ VL+ V  +   GP+LVHVVT++ +      A 
Sbjct: 257 MDGGTLFEELGFYYVGPIDGHNLDHLLPVLKNVRDM-EEGPILVHVVTQKGKGYGPAEAS 315

Query: 374 DTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
             +    ++      + + + P    +  Y + F ++LV EA+KD+ IV + A M     
Sbjct: 316 ADKYHAVVKFDVATGTQAKAKP---NAPAYQNVFGQSLVKEAQKDEKIVAITAAMPSGTG 372

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           + +F + FP+R FDVG+AEQHAVTF+AGLA  G KPFC I S FLQR YDQ+V+DV  Q 
Sbjct: 373 VDIFNKAFPDRTFDVGIAEQHAVTFAAGLASEGYKPFCAIYSTFLQRGYDQIVHDVAIQN 432

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPVRF I  AGLVG+DG T  G+FD  ++ CLPNM++MA +DE ELV MVAT  +IDDRP
Sbjct: 433 LPVRFAIDRAGLVGADGATHAGSFDNAYLGCLPNMVIMAAADEAELVHMVATQVAIDDRP 492

Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
              RYPRG     ++P   GIP+EIGKG+++ +G  +ALL +G  +  C KA   L+  G
Sbjct: 493 SSLRYPRGEGRGIEMPEV-GIPLEIGKGRMIRQGSKIALLSFGTRLAECEKAADELAAHG 551

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSG-VK 672
           +  T+ADARF KPLD +LV +L ++H  LIT+EEGS+GGFGSHV+ F+   G LDSG VK
Sbjct: 552 LSTTIADARFMKPLDTELVLKLARDHEILITIEEGSVGGFGSHVAQFLTDQGALDSGMVK 611

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
           +R +VLPD + +H +P    A AGL    I A     LG+
Sbjct: 612 FRTMVLPDVFQDHDTPAAMYARAGLDAKGIVAKVFEALGK 651


>gi|144900827|emb|CAM77691.1| Deoxyxylulose-5-phosphate synthase [Magnetospirillum
           gryphiswaldense MSR-1]
          Length = 637

 Score =  605 bits (1561), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 312/637 (48%), Positives = 417/637 (65%), Gaps = 16/637 (2%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +LD V+ P   ++ T ++L+QLA E+R E+   VS T   L + L  VELTVALHHVF  
Sbjct: 7   LLDGVDCPADTRAFTPEQLRQLADEVRQEMIEAVSITGGHLGAGLGVVELTVALHHVFQT 66

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           PVDK++WDVG Q Y HKILTGR+  I TLR+  G+SG+T RSES YDPF AGH   S+SA
Sbjct: 67  PVDKLIWDVGHQCYPHKILTGRKDRIRTLRQGGGLSGFTKRSESAYDPFGAGHSSTSISA 126

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKI 260
           GLGMAV RD+KG+   ++ VI +G   AG  YEAM+NAG +DS ++VILND+  S+ P  
Sbjct: 127 GLGMAVGRDLKGEDFNVIAVIGDGAMSAGMVYEAMNNAGSMDSRLVVILNDNDMSIAP-- 184

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQ 320
                  + A+S+ LSR+ SS+ +  +R  AK +   +   +   A + +EYARG +   
Sbjct: 185 ------PVGAMSAYLSRLLSSRPYLSIRHFAKDLAAMLPPPLERAAKRAEEYARGFVS-G 237

Query: 321 GSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSEA 380
           G TLFEELG YY+GP+DGHN + L+ VL+ V       PVL+HVVT++ R     +++ A
Sbjct: 238 GGTLFEELGFYYVGPIDGHNFDHLLPVLKNVRDSEDNKPVLIHVVTKKGRGYPPAEQA-A 296

Query: 381 IEKQQEGASD----SNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQL 436
            +    G  D    + + P  N + +Y   F +AL+ EAE D  +V + A M     L  
Sbjct: 297 DKYHGVGKFDVVTGALAKPKAN-APSYTSVFAQALLAEAENDDRVVAITAAMPAGTGLDK 355

Query: 437 FQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPV 496
           F E+FP R FDVG+AEQHAVTF+AGLAC G KPFC + S FLQR YDQ+V+DV  Q+LPV
Sbjct: 356 FAERFPNRCFDVGIAEQHAVTFAAGLACEGFKPFCALYSTFLQRGYDQLVHDVVIQKLPV 415

Query: 497 RFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCF 556
           RF I  AGLVG+DG T  GAFD+ ++ CLP++++M+P+DE EL+  VAT  ++DDRP  F
Sbjct: 416 RFAIDRAGLVGADGATHAGAFDLAYLGCLPDIVLMSPADELELMHAVATAKALDDRPSAF 475

Query: 557 RYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDV 616
           RYPRG  V  DLP  RG  + IGKG+++ EG  VALL  G  +   +KA   L+  G+  
Sbjct: 476 RYPRGEGVGLDLP-VRGEVLPIGKGRIIREGSRVALLSLGTRLGEAMKAADELAARGLST 534

Query: 617 TVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWRPI 676
           TVADARF KPLD  ++  L + H  L+T+EEGSIGGFG+ V HF+A  G LD G+K RP+
Sbjct: 535 TVADARFMKPLDQDMILRLAREHEVLVTIEEGSIGGFGAQVLHFLAHSGALDRGLKVRPL 594

Query: 677 VLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRT 713
           VLPD ++EH +P +Q  LAGL   HI A  L+ LG++
Sbjct: 595 VLPDVFLEHEAPLKQYDLAGLNAPHIVACVLAALGQS 631


>gi|153007892|ref|YP_001369107.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ochrobactrum anthropi ATCC
           49188]
 gi|166198634|sp|A6WWC4.1|DXS_OCHA4 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|151559780|gb|ABS13278.1| deoxyxylulose-5-phosphate synthase [Ochrobactrum anthropi ATCC
           49188]
          Length = 638

 Score =  605 bits (1560), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 319/640 (49%), Positives = 407/640 (63%), Gaps = 22/640 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD    P  L++L   +L QLA E+R+EL  +VS T   L + L  VELTVALHHVF
Sbjct: 6   TPLLDKAPIPEALRALPESDLPQLAQELRAELIDVVSTTGGHLGAGLGVVELTVALHHVF 65

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+I+WDVG Q Y HKILTGRR  I TLR+  G+SG+T R+ESEYDPF A H   S+
Sbjct: 66  DTPHDRIIWDVGHQAYPHKILTGRRDRIRTLRQTGGLSGFTKRTESEYDPFGAAHSSTSI 125

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVA D+ G++  ++ VI +G+  AG AYEAM+NAG LD+ +IVILND+  S+ P
Sbjct: 126 SAGLGMAVASDLSGEKRNVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAP 185

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S+ L+R+ S K++R +RE AK + K++ + + + A K +EYAR    
Sbjct: 186 --------PTGAMSAYLARLVSGKTYRSVREAAKQVAKKLPKFLQDKARKSEEYARAFF- 236

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G TLFEELG YY+GP+DGHN++ L+ +L+ V      GPVL+HVVT++ +       +
Sbjct: 237 -TGGTLFEELGFYYVGPIDGHNLDHLLPILKNVRDT-QEGPVLIHVVTQKGK---GYAPA 291

Query: 379 EAIEKQQEGA------SDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
           EA   +  G       +   S P  N + +Y   F  +L+ EA  D  IV + A M    
Sbjct: 292 EAAADKYHGVNKFDVITGKQSKPPAN-APSYTKIFGTSLIEEARHDDRIVAITAAMPSGT 350

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            L LF E FP+R FDVG+AEQHAVTF+AGLA  G KPFC I S FLQR YDQVV+DV  Q
Sbjct: 351 GLDLFGEVFPQRTFDVGIAEQHAVTFAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQ 410

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
            LPVRF I  AGLVG+DGPT  G+FD  F++ LP  +VMA SDE EL  MV T A  D+ 
Sbjct: 411 NLPVRFPIDRAGLVGADGPTHAGSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEG 470

Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
           P+ FRYPRG  V  DLP  RG  +EIGKG+++ EG  VALL +G  +Q CL A   L   
Sbjct: 471 PISFRYPRGDGVGVDLP-ERGQLLEIGKGRIVREGTKVALLSFGTRLQECLAAADELGAA 529

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 672
           G+  TVADARF KPLD  L+R L + H  L+ VEEG++GGF SHV  F+A DGLLD G+K
Sbjct: 530 GLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFASHVLQFLATDGLLDRGLK 589

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
            R + LPD Y +H  P    A AGL    I     + LGR
Sbjct: 590 VRALTLPDTYQDHGKPDAMYAEAGLDRTGIVHAVFAALGR 629


>gi|407784767|ref|ZP_11131916.1| 1-deoxy-D-xylulose-5-phosphate synthase [Celeribacter baekdonensis
           B30]
 gi|407204469|gb|EKE74450.1| 1-deoxy-D-xylulose-5-phosphate synthase [Celeribacter baekdonensis
           B30]
          Length = 642

 Score =  605 bits (1560), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 322/653 (49%), Positives = 417/653 (63%), Gaps = 34/653 (5%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           D+  TP LD V  P  LK+L+  ELK+LA E+R E  S VS T   L + L  VELTVAL
Sbjct: 3   DRPATPTLDRVHVPADLKALSDPELKRLAHELRQETISAVSVTGGHLGAGLGVVELTVAL 62

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H VF AP D+++WDV  Q Y HKILTGRR  I TLR + G+SG+T RSES YDPF A H 
Sbjct: 63  HAVFDAPKDRLIWDVSHQCYPHKILTGRRDRIRTLRTEGGLSGFTKRSESPYDPFGAAHS 122

Query: 195 CNSVSAGLGMAVARDIKGKREC----IVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
             S+SA LG AVARD+ G  E      + VI +G+  AG A+EAM+NAG+L   +IVILN
Sbjct: 123 STSISAALGFAVARDLGGAPENGIGDAIAVIGDGSMSAGMAFEAMNNAGHLGKRLIVILN 182

Query: 251 DSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVD 310
           D+  S+ P           ALSS L+R+ +   F++L+  AKG    +     E A +  
Sbjct: 183 DNEMSIAPPT--------GALSSYLTRLYAGAPFQELKAAAKGAVSLLPHPFQEGAKRAK 234

Query: 311 EYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR 370
           E  +GM    G TLFEELG  Y+GP+DGH+++ L+SVL+ V +  + GP+L+H +T++ +
Sbjct: 235 EMLKGMT--VGGTLFEELGFSYVGPIDGHDLDQLLSVLRTVKARAT-GPILIHAITQKGK 291

Query: 371 ----------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKD 420
                     +   T K + +  +Q+ A  +        + +Y   F +AL+ EA  D  
Sbjct: 292 GYAPAEGRPDKGHATGKFDMVTGEQKKAKSN--------APSYTSVFAKALIQEAGFDDK 343

Query: 421 IVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQR 480
           IV V A M     L LF E+FP R FDVG+AEQH VTF AGLA GG+KPFC + S FLQR
Sbjct: 344 IVAVTAAMPDGTGLNLFAERFPTRCFDVGIAEQHGVTFCAGLAAGGMKPFCTMYSTFLQR 403

Query: 481 AYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELV 540
            YDQVV+DV  QRLPVRF I  AGLVG+DG T  G+FD+ F++ LP M+VMA +DE ELV
Sbjct: 404 GYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGSFDVAFLANLPGMVVMAAADEAELV 463

Query: 541 DMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQ 600
            MVAT A+ DD P+ FRYPRG  V   +P  RG+P+EIGKG+V+VEG  VALL +G  ++
Sbjct: 464 HMVATAAAHDDGPIAFRYPRGEGVGVQMP-ERGVPLEIGKGRVVVEGTRVALLSFGTRLE 522

Query: 601 NCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHF 660
           + LKA   L+  GI  TVADARF KPLD  L+R+L  NH  LIT+EEG++GGFGSHV+ F
Sbjct: 523 SSLKAAENLAAKGISCTVADARFAKPLDHDLIRDLVANHEALITIEEGAVGGFGSHVADF 582

Query: 661 IALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRT 713
           +A +GL D G+K+R + LPD +I+ ASP    A+AGL    I A  LS LG T
Sbjct: 583 LANEGLFDRGLKFRSMTLPDTFIDQASPEAMYAMAGLNTPDIEAKVLSALGVT 635


>gi|338740575|ref|YP_004677537.1| 1-deoxy-d-xylulose-5-phosphate synthase [Hyphomicrobium sp. MC1]
 gi|337761138|emb|CCB66971.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein,
           thiamin-binding [Hyphomicrobium sp. MC1]
          Length = 648

 Score =  605 bits (1560), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 318/633 (50%), Positives = 410/633 (64%), Gaps = 22/633 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V+ P  LK L+  EL QLA E+R+EL   VS+T   L + L  VELTVALH++F
Sbjct: 11  TPLLDQVDTPDDLKQLSESELPQLADELRTELIEAVSQTGGHLGAGLGVVELTVALHYLF 70

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDV  Q+Y HKILTGRR  I TLR+  G+SG+T R+ESEYDPF A H   S+
Sbjct: 71  DTPRDRLIWDVSHQSYPHKILTGRRDRIRTLRQPGGLSGFTKRTESEYDPFGAAHSSTSI 130

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVAR++ G    +V VI +G   AG AYEAM+NAG     +IVILND+  S+ P
Sbjct: 131 SAGLGMAVAREMSGGTNNVVCVIGDGAMSAGMAYEAMNNAGARSERLIVILNDNEMSIAP 190

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      ALSS L+R  SS S+  +R++AK + KR+ +   E AA+V+EY R +  
Sbjct: 191 PT--------GALSSYLARTTSSDSYLYVRDLAKQLAKRLPKSWGERAARVEEYTRSLW- 241

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G   FEELG YYIGP+DGH++  L+ +L+ V      GP+LVHVVT   ++ +    +
Sbjct: 242 -HGGAWFEELGFYYIGPIDGHDLSQLVPILRNVRD-AEQGPILVHVVT---KKGKGYAPA 296

Query: 379 EAIEKQQEGASDSNSLPFGNYSR------TYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
           EA   +  G +  N +  G  ++      +Y   F ++L+ EA+KD  IV + A M    
Sbjct: 297 EASADKYHGVTKFNVVT-GVQTKAPASAPSYTRVFADSLIDEAKKDDKIVAITAAMPDGT 355

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            L +F   FP+R FDVG+AEQHAVTF+AGLA  G+KPFC + S FLQR YDQVV+DV  Q
Sbjct: 356 GLDVFGRAFPDRTFDVGIAEQHAVTFAAGLATEGMKPFCALYSTFLQRGYDQVVHDVALQ 415

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
            LPVRF I  AG VG+DG T  G+FD+ ++ CLPNM++MAP+DE EL  MVAT A+IDDR
Sbjct: 416 SLPVRFAIDRAGFVGADGATHAGSFDLAYLGCLPNMVIMAPADECELKHMVATAAAIDDR 475

Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
           P  FRYPRG      LP   GIP+EIGKG++L EG  +ALL  G  +Q  LKA   L+ L
Sbjct: 476 PSAFRYPRGEGTGVALP-ETGIPLEIGKGRILREGSTIALLSLGTRLQETLKAADQLAAL 534

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 672
           G+  TVADARF KPLD  L+R L +NH  LITVEEGSIGGFGSHV H++A +GLLD G+K
Sbjct: 535 GLSATVADARFMKPLDTDLIRRLAENHDVLITVEEGSIGGFGSHVLHYLAENGLLDRGLK 594

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAAT 705
            R  V+PD +++   P      AGL    I  T
Sbjct: 595 VRSKVMPDEFVDQDKPEVMNQRAGLCAQGIVET 627


>gi|404317422|ref|ZP_10965355.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ochrobactrum anthropi
           CTS-325]
          Length = 638

 Score =  605 bits (1559), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 318/640 (49%), Positives = 408/640 (63%), Gaps = 22/640 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD  + P  L++L   +L QLA E+R+EL  +VS T   L + L  VELTVALHHVF
Sbjct: 6   TPLLDKAQIPEALRALPESDLPQLAQELRAELIDVVSTTGGHLGAGLGVVELTVALHHVF 65

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+I+WDVG Q Y HKILTGRR  I TLR+  G+SG+T R+ESEYDPF A H   S+
Sbjct: 66  DTPHDRIIWDVGHQAYPHKILTGRRDRIRTLRQTGGLSGFTKRTESEYDPFGAAHSSTSI 125

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVA D+ G++  ++ VI +G+  AG AYEAM+NAG LD+ +IVILND+  S+ P
Sbjct: 126 SAGLGMAVASDLSGEKRNVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAP 185

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S+ L+R+ S K++R +RE AK + K++ + + + A K +EYAR    
Sbjct: 186 --------PTGAMSAYLARLVSGKTYRSVREAAKQVAKKLPKFLQDKARKSEEYARAFF- 236

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G TLFEELG YY+GP+DGHN++ L+ +L+ V      GPVL+HVVT++ +       +
Sbjct: 237 -TGGTLFEELGFYYVGPIDGHNLDHLLPILKNVRDT-QEGPVLIHVVTQKGK---GYAPA 291

Query: 379 EAIEKQQEGA------SDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
           EA   +  G       +   S P  N + +Y   F  +L+ EA  D  IV + A M    
Sbjct: 292 EAAADKYHGVNKFDVITGKQSKPPAN-APSYTKIFGTSLIEEARHDDRIVAITAAMPSGT 350

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            L LF E FP+R FDVG+AEQHAVTF+AGLA  G KPFC I S FLQR YDQVV+DV  Q
Sbjct: 351 GLDLFGEVFPQRTFDVGIAEQHAVTFAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQ 410

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
            LPVRF I  AGLVG+DGPT  G+FD  F++ LP  +VMA SDE EL  MV T A  ++ 
Sbjct: 411 NLPVRFPIDRAGLVGADGPTHAGSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYNEG 470

Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
           P+ FRYPRG  V  DLP  RG  +EIGKG+++ EG  VALL +G  +Q CL A   L   
Sbjct: 471 PISFRYPRGDGVGVDLP-ERGQLLEIGKGRIVREGTKVALLSFGTRLQECLAAADELGAA 529

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 672
           G+  TVADARF KPLD  L+R L + H  L+ VEEG++GGF SHV  F+A DGLLD G+K
Sbjct: 530 GLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFASHVLQFLATDGLLDRGLK 589

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
            R + LPD Y +H  P    A AGL    I     + LGR
Sbjct: 590 VRALTLPDTYQDHGKPDAMYAEAGLDRTGIVHAVFAALGR 629


>gi|427429236|ref|ZP_18919272.1| 1-deoxy-D-xylulose 5-phosphate synthase [Caenispirillum salinarum
           AK4]
 gi|425880916|gb|EKV29610.1| 1-deoxy-D-xylulose 5-phosphate synthase [Caenispirillum salinarum
           AK4]
          Length = 639

 Score =  603 bits (1555), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 316/643 (49%), Positives = 416/643 (64%), Gaps = 21/643 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V++P  ++ L++ +L QLA E+R++L   VS+    L + L  VELTVALHHVF
Sbjct: 7   TPLLDTVKSPEDMRKLSVDQLAQLADEVRADLIDAVSRVGGHLGAGLGVVELTVALHHVF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+++WDVG Q Y HKI+TGRR  + T+R+  GISG+T RSESEYDPF AGH   S+
Sbjct: 67  NTPTDRLIWDVGHQCYPHKIVTGRRDGLRTVRQPGGISGFTLRSESEYDPFGAGHSSTSI 126

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGM VA D+ G    ++ VI +G   AG AYEAM+NAG +D+ +IVILND+  S+ P
Sbjct: 127 SAGLGMKVACDLAGDDRHVICVIGDGAMSAGMAYEAMNNAGAMDAKLIVILNDNDMSIAP 186

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                   ++ A+S+ LS++ SSK +   R++AK M  R    ++  A + +EYARGM+ 
Sbjct: 187 --------AVGAMSAYLSKVLSSKPWLSARQLAKEMAARFPGPINRAAKRAEEYARGMV- 237

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G TLFEE+G YY+GP+DGH ++ L+ VL+ V      GPVL+H +T++ R       +
Sbjct: 238 -TGGTLFEEMGFYYVGPIDGHKMDHLVPVLKNVRDSDPQGPVLIHCITQKGR---GYAPA 293

Query: 379 EAIEKQQEGASDSNSLPFGNYSR------TYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
           EA   +  G S  + +  G  ++      +Y   F +ALV EA +D  +V V A M    
Sbjct: 294 EAAADKYHGVSKFDVVT-GTQAKAKPNAPSYTSVFAKALVEEAREDDKVVAVTAAMPGGT 352

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            L  F ++FPER FDVG+AEQHAVTF+AGLA  G KPF  I S FLQR YDQVV+DV  Q
Sbjct: 353 GLDKFGKEFPERTFDVGIAEQHAVTFAAGLASEGYKPFAAIYSTFLQRGYDQVVHDVAIQ 412

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
            LPVRF I  AG VG+DG T  G+FD+ ++ CLPNM  + P+DE ELV  VAT  + D  
Sbjct: 413 NLPVRFAIDRAGFVGADGATHQGSFDLCYLCCLPNMTFLCPADEAELVHAVATAVAHDSG 472

Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
           P  FRYPRG  V T LP  +G  +EIGKG+VL EG  VA+L  G  +    KA   L+  
Sbjct: 473 PFAFRYPRGEGVGTQLP-EKGEVLEIGKGRVLREGSTVAILSLGTRLTAAQKAAEDLAAK 531

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 672
           G+  TVADARF KP+D  LVR L  +H  LITVEEG+ GGFG+HV HF+A +GLLD+G+K
Sbjct: 532 GLSCTVADARFAKPIDTDLVRRLAADHEVLITVEEGARGGFGAHVLHFLAEEGLLDAGLK 591

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTRE 715
            R +  PD +IEH  P  Q+A+AGL    IAATAL  LGR  E
Sbjct: 592 VRTMCFPDRFIEHEKPDTQIAMAGLRPEDIAATALKALGRGEE 634


>gi|389697003|ref|ZP_10184645.1| 1-deoxy-D-xylulose-5-phosphate synthase [Microvirga sp. WSM3557]
 gi|388585809|gb|EIM26104.1| 1-deoxy-D-xylulose-5-phosphate synthase [Microvirga sp. WSM3557]
          Length = 635

 Score =  603 bits (1555), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 316/641 (49%), Positives = 419/641 (65%), Gaps = 23/641 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD ++ P  L+ L   +L+Q+A E+R+E  S VS T   L + L  VELTVALH+VF
Sbjct: 3   TPLLDSIKTPDDLRQLPENQLRQVADELRTETISAVSVTGGHLGAGLGVVELTVALHYVF 62

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR  I TLR+ DG+SG+T RSESEYDPF A H   S+
Sbjct: 63  DTPRDRLIWDVGHQAYPHKILTGRRDRIRTLRQADGLSGFTKRSESEYDPFGAAHSSTSI 122

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVARD++GKR  ++ VI +G   AG AYEAM+NAG + S +IVILND+  S+ P
Sbjct: 123 SAGLGMAVARDLEGKRNNVIAVIGDGAMSAGMAYEAMNNAGAMHSRLIVILNDNDMSIAP 182

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+SS L+R+ S  ++R +RE AK + K++ + +++ AAK +E+ARG   
Sbjct: 183 --------PTGAMSSYLARLVSGGTYRGIRETAKQLAKKLPKFIYDKAAKAEEFARGFW- 233

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G T+FEELG YY+GP+DGHN++ L+ +L+ V   G+ GP+LVHVVT   ++ +    +
Sbjct: 234 -TGGTMFEELGFYYVGPIDGHNLDHLLPILKNVRDTGT-GPILVHVVT---KKGKGYAPA 288

Query: 379 EAIEKQQEG------ASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
           EA   +  G       + + +    N + +Y   F E+L+ EA+ D  IV V A M    
Sbjct: 289 EAAADKYHGVVTFDVVTGAQTKAKAN-APSYTKVFGESLIKEAQADDKIVAVTAAMPSGT 347

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            + LF ++FP R FDVG+AEQHAVTF+AG+A  G KPFC I S FLQRAYDQVV+DV  Q
Sbjct: 348 GIDLFGKEFPARTFDVGIAEQHAVTFAAGMATEGYKPFCAIYSTFLQRAYDQVVHDVAIQ 407

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
            LPVRF +  AGLVG+DG T  G+FD+ ++ CLPNM+VMA +DE ELV MVAT A+ D  
Sbjct: 408 NLPVRFALDRAGLVGADGATHAGSFDVAYLGCLPNMVVMAAADEAELVHMVATAAAHDSG 467

Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
           P+ FRYPRG  V  D+P  +GIP+ IGKG+V+ EG  +ALL  G  +   LKA   L   
Sbjct: 468 PIAFRYPRGEGVGVDMP-EKGIPLAIGKGRVVKEGSRIALLSLGTRLAESLKAAEELEAR 526

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSG-V 671
           G+  TVADARF KPLD +L+  L ++H  L+TVEEGSIGGFGS+V   +A  G LD G +
Sbjct: 527 GLSTTVADARFAKPLDEELILALARDHEVLVTVEEGSIGGFGSYVLQLLADKGALDRGSL 586

Query: 672 KWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
           K R +VLPD Y +   P +  A AGL    I       LG+
Sbjct: 587 KVRSMVLPDIYQDQDKPERMYAKAGLDAAGIVTKVFEALGQ 627


>gi|398821070|ref|ZP_10579560.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bradyrhizobium sp. YR681]
 gi|398228267|gb|EJN14399.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bradyrhizobium sp. YR681]
          Length = 642

 Score =  603 bits (1555), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 306/644 (47%), Positives = 421/644 (65%), Gaps = 20/644 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD +  P  L+ L I++++Q+A E+R E    VS T     + L  VELT A+H+VF
Sbjct: 7   TPLLDTIRTPDDLRKLKIEQVRQVADELRQETIDAVSVTGGHFGAGLGVVELTTAIHYVF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR  I TLR   G+SG+T RSES+YDPF A H   S+
Sbjct: 67  DTPRDRLIWDVGHQAYPHKILTGRRDRIRTLRTGGGLSGFTKRSESDYDPFGAAHSSTSI 126

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVARD+ G +  ++ VI +G   AG AYEAM+NAG ++S +IVILND+  S+ P
Sbjct: 127 SAGLGMAVARDLAGGKNNVIAVIGDGAMSAGMAYEAMNNAGAMNSRLIVILNDNDMSIAP 186

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                    + A+S+ LSR+ S K++R LR+ AK + KR+ + +   A +V+EY+RG + 
Sbjct: 187 --------PVGAMSAYLSRLYSGKTYRTLRDAAKQINKRLPKILANRANRVEEYSRGFM- 237

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR-----RAE 373
             G TLFEELG YY+GP+DGHN++ L+ VL+ V  +   GP+LVHVVT++ +      A 
Sbjct: 238 MDGGTLFEELGFYYVGPIDGHNLDHLLPVLKNVRDM-ETGPILVHVVTQKGKGYGPAEAS 296

Query: 374 DTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
             +    ++      + + S P    +  Y + F ++LV EAEKD  IV + A M     
Sbjct: 297 ADKYHAVVKFDVATGTQAKSKP---NAPAYQNVFGQSLVKEAEKDDKIVAITAAMPSGTG 353

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           + +F + FP+R FDVG+AEQHAVTF+AGLA  G KPFC I S FLQR YDQ+V+DV  Q 
Sbjct: 354 VDIFNKAFPDRTFDVGIAEQHAVTFAAGLATEGYKPFCAIYSTFLQRGYDQIVHDVAIQN 413

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPVRF I  AGLVG+DG T  G+FD  ++ CLPNM++MA +DE ELV MVAT  +I+DRP
Sbjct: 414 LPVRFAIDRAGLVGADGATHAGSFDNAYLGCLPNMVIMAAADEAELVHMVATQVAINDRP 473

Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
              RYPRG     ++P   G+P+E+GKG+++ +G  +ALL +G  +  C KA   L+  G
Sbjct: 474 SSLRYPRGEGRGIEMPDV-GVPLEVGKGRMIRQGNKIALLSFGTRLAECEKAADELAAHG 532

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSG-VK 672
           +  ++ADARF KPLD +LV +L ++H  LITVEEGSIGGFGSHV+ ++   G+LD+G VK
Sbjct: 533 LSTSIADARFMKPLDTELVLKLARDHDVLITVEEGSIGGFGSHVAQYLTDQGVLDTGMVK 592

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREA 716
           +R +VLPD + +H +P    A AGL    I A     LG+  +A
Sbjct: 593 FRSMVLPDVFQDHDTPAAMYARAGLDAKGIVAKVFEALGKDVKA 636


>gi|90422661|ref|YP_531031.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodopseudomonas palustris
           BisB18]
 gi|118595613|sp|Q21A74.1|DXS_RHOPB RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|90104675|gb|ABD86712.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Rhodopseudomonas palustris
           BisB18]
          Length = 641

 Score =  603 bits (1554), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 309/638 (48%), Positives = 418/638 (65%), Gaps = 17/638 (2%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD +  P  L+ L I +++Q+A E+R E    VS T     + L  VELT A+H+VF
Sbjct: 7   TPLLDTIRTPADLRKLRIDQVRQVADELRQETIEAVSVTGGHFGAGLGVVELTTAIHYVF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR  I TLR   G+SG+T R+ES+YDPF A H   S+
Sbjct: 67  DTPRDRLIWDVGHQAYPHKILTGRRDRIRTLRTGGGLSGFTKRTESDYDPFGAAHSSTSI 126

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVARD+ G +  ++ VI +G+  AG AYEAM+NAG ++S +IVILND+  S+ P
Sbjct: 127 SAGLGMAVARDLAGGKNNVIAVIGDGSISAGMAYEAMNNAGAMNSRLIVILNDNNMSIAP 186

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARG-MI 317
                    + A+S+ LSR+ S K++R LRE  K + K + + + + AA+ +EY+RG M+
Sbjct: 187 --------PVGAMSAYLSRLYSGKTYRTLREAGKQIGKHLPKLIADRAARAEEYSRGFMM 238

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRR---AED 374
           G  G TLFEELG YY+GPVDGHN++ L+ +LQ V      GP L+HVVT++ +    AE 
Sbjct: 239 G--GGTLFEELGFYYVGPVDGHNLDHLLPILQNVRD-ADTGPFLIHVVTQKGKGYGPAEA 295

Query: 375 TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
                    + + A+ + +    N + +Y + F ++LV EA+KD  IV + A M     +
Sbjct: 296 ASDKYHAVVKFDIATGAQAKAKSN-APSYQNVFGQSLVKEAQKDDKIVGITAAMPSGTGI 354

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
            +F++ FP R FDVG+AEQHAVTF+AGLA  G KPFC I S FLQR YDQVV+DV  Q L
Sbjct: 355 DIFEKAFPTRTFDVGIAEQHAVTFAAGLAAEGYKPFCAIYSTFLQRGYDQVVHDVAIQSL 414

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PVRF I  AGLVG+DG T  G+FD  F+ CLPNM++MA SDE ELV MVAT  +I+DRP 
Sbjct: 415 PVRFAIDRAGLVGADGATHAGSFDNAFLGCLPNMVIMAASDEAELVHMVATQVAINDRPS 474

Query: 555 CFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGI 614
             RYPRG     ++P   GI +EIGKG+++ EG  +ALL +G  +  C KA   L+ LG+
Sbjct: 475 AVRYPRGEGRGVEMPEV-GIALEIGKGRIVREGNKIALLSFGTRLAECEKAADELATLGL 533

Query: 615 DVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWR 674
             T+ADARF KPLD++LV +L ++H  L+T+EEGSIGGFGSHV   +A  G+LD  V+ R
Sbjct: 534 STTIADARFMKPLDVELVLKLARDHEILLTIEEGSIGGFGSHVMQTLAEHGMLDGEVRMR 593

Query: 675 PIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
            +VLPD +++H +PT   A AGL    I       LG+
Sbjct: 594 SLVLPDEFMDHDTPTAMYARAGLDAKGIVKKVFEALGK 631


>gi|357517201|ref|XP_003628889.1| 1-Deoxy-D-xylulose 5-phosphate synthase [Medicago truncatula]
 gi|355522911|gb|AET03365.1| 1-Deoxy-D-xylulose 5-phosphate synthase [Medicago truncatula]
          Length = 521

 Score =  603 bits (1554), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 298/528 (56%), Positives = 380/528 (71%), Gaps = 20/528 (3%)

Query: 204 MAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH-SLHPKIEE 262
           MAVARD+ GK+  +++VI +G   AGQAYEAM+NAG++DSN+IVILND++  SL     +
Sbjct: 1   MAVARDLLGKKNSVISVIGDGAMTAGQAYEAMNNAGFIDSNLIVILNDNKQVSLPTATLD 60

Query: 263 SPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQGS 322
            P T + ALSSTLS+IQ+S+ FR+LRE  K +TK+IG   H  A+KVD+YAR  I   GS
Sbjct: 61  GPATPVGALSSTLSKIQASRKFRKLREATKNITKQIGGQTHLVASKVDKYARDFISGSGS 120

Query: 323 TLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR----------RA 372
           +LFEELG+YYIGP+DGHNIEDL+++ ++V ++ + GPVL+H+VTE+ +          R 
Sbjct: 121 SLFEELGMYYIGPMDGHNIEDLVNIFEKVKAMPAPGPVLIHIVTEKGKGYPPALAAADRM 180

Query: 373 EDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
               K +     Q     S        +  Y   F ++L+ EAE D  IV +HA M    
Sbjct: 181 HGVVKFDPKTGHQFKPKPS--------TLAYTQYFADSLIKEAEMDNKIVAIHAAMGGGT 232

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            L  FQ++FP+R FDVG+AEQHAVTF+AGLA  GLKPFC I S+FLQR YDQVV+DVD Q
Sbjct: 233 GLNYFQKRFPDRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRGYDQVVHDVDLQ 292

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
           +LPVRF +  AGLVG+DGPT CGAFDITFM+CLPNMIVMAPSDE EL++MVAT A+IDDR
Sbjct: 293 KLPVRFAMDRAGLVGADGPTHCGAFDITFMACLPNMIVMAPSDEAELMNMVATAAAIDDR 352

Query: 553 PVCFRYPRGAIVRTDLP-GYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSK 611
           P CFR+PRG  +  +LP   +G P+EIGKG++L+EG  VA+LGYG MVQ C+KA  +L  
Sbjct: 353 PSCFRFPRGNGIGANLPLNNKGTPLEIGKGRILLEGSRVAILGYGCMVQQCMKAAEMLRA 412

Query: 612 LGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGV 671
           +G+ VTVADARFCKPLD  L+R L + H  LITVEEGSIGGFGSHVS F++L GLLD  +
Sbjct: 413 VGVYVTVADARFCKPLDTDLIRLLAREHEILITVEEGSIGGFGSHVSQFLSLAGLLDGPL 472

Query: 672 KWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLL 719
           K R ++LPD YI+H +P  Q+  AGL+  HI AT LSLL   +EALL 
Sbjct: 473 KLRSMMLPDRYIDHGAPNDQIDEAGLSSKHILATVLSLLDMPKEALLF 520


>gi|91978764|ref|YP_571423.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodopseudomonas palustris
           BisB5]
 gi|123748724|sp|Q130G7.1|DXS_RHOPS RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|91685220|gb|ABE41522.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Rhodopseudomonas palustris
           BisB5]
          Length = 638

 Score =  602 bits (1552), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 311/642 (48%), Positives = 416/642 (64%), Gaps = 17/642 (2%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD +  P  L+ L + +++Q+A E+R E    VS T     + L  VELT A+H+VF
Sbjct: 4   TPLLDTIRTPEDLRKLRVDQVQQVADELRQETIDAVSVTGGHFGAGLGVVELTTAIHYVF 63

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR  I TLR   G+SG+T R+ES+YDPF A H   S+
Sbjct: 64  DTPRDRLIWDVGHQAYPHKILTGRRDRIRTLRTAGGLSGFTKRTESDYDPFGAAHSSTSI 123

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVARD+ G    ++ VI +G+  AG AYEAM+NAG ++S +IVILND+  S+ P
Sbjct: 124 SAGLGMAVARDLAGGNNNVIAVIGDGSISAGMAYEAMNNAGAMNSRLIVILNDNNMSIAP 183

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARG-MI 317
                    + A+S+ LSR+ S K++R LRE  K + K + + + + AA+ +EY+RG M+
Sbjct: 184 --------PVGAMSAYLSRLYSGKTYRSLREAGKQIGKHLPKLIADRAARAEEYSRGFMM 235

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRR---AED 374
           G  G TLFEELG YY+GP+DGHN++ L+ +LQ V      GP L+HVVT++ +    AE 
Sbjct: 236 G--GGTLFEELGFYYVGPIDGHNLDHLLPILQNVRD-AETGPFLIHVVTQKGKGYAPAEA 292

Query: 375 TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
                    + + A+ + +    N + +Y + F ++LV EA KD  IV + A M     +
Sbjct: 293 ASDKYHAVVKFDIATGTQAKAKSN-APSYQNVFGQSLVKEAAKDDKIVGITAAMPSGTGI 351

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
            +F++ FP R FDVG+AEQHAVTF+AGLA  G KPFC I S FLQRAYDQVV+DV  Q L
Sbjct: 352 DIFEKAFPARTFDVGIAEQHAVTFAAGLATEGYKPFCAIYSTFLQRAYDQVVHDVALQSL 411

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PVRF I  AGLVG+DG T  G+FD  ++ CLPNM++MA SDE ELV MVAT  +I+DRP 
Sbjct: 412 PVRFAIDRAGLVGADGATHAGSFDNAYLGCLPNMVIMAASDEAELVHMVATQVAINDRPS 471

Query: 555 CFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGI 614
             RYPRG     ++P   G+P+EIGKG+V+ +G  VALL +G  +  C KA   L+ LG+
Sbjct: 472 ALRYPRGEGRGVEMPDV-GVPLEIGKGRVIRQGNKVALLSFGTRLAECEKAAEELAALGL 530

Query: 615 DVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWR 674
             TVADARF KPLD+ LV +L   H  LIT+EEGSIGGFG+HV   +A  G LD  VK R
Sbjct: 531 STTVADARFMKPLDVDLVLKLANEHEILITIEEGSIGGFGTHVMQTLAEHGKLDGEVKMR 590

Query: 675 PIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREA 716
            +VLPD +++H +PT   A AGL    I       LG+  +A
Sbjct: 591 AMVLPDVFLDHDTPTAMYANAGLDAKAIVKKVFEALGKEHKA 632


>gi|374341516|gb|AEZ35186.1| 1-deoxy-D-xylulose 5-phosphate synthase-II [Botryococcus braunii]
          Length = 771

 Score =  601 bits (1550), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 312/680 (45%), Positives = 438/680 (64%), Gaps = 30/680 (4%)

Query: 59  TVSRICALPDIDDFF--WDK------------EPTPILDLVENPLRLKSLTIKELKQLAV 104
           T S+   LPD +D +  WDK              TP+LD +++PL LK+ ++ EL+ L  
Sbjct: 71  TYSKTYDLPDSEDGYGLWDKITTDEIEEWNNGPETPLLDTIKSPLGLKNYSMPELRALCK 130

Query: 105 EIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRS 164
           E+R+++   VS+T   L SSL   ELTVALH+VF+ P DKI+WDVG Q Y HKILTGRR+
Sbjct: 131 ELRADIIHTVSQTGGHLGSSLGVAELTVALHYVFNCPYDKIIWDVGHQAYGHKILTGRRA 190

Query: 165 LIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNG 224
            + T+R+  G+SG+T RSESEYD F AGH   S+SA LGMAV RD K +    + VI +G
Sbjct: 191 QMPTIRQYKGLSGFTKRSESEYDAFGAGHSSTSISAALGMAVGRDFKNQNNHAIAVIGDG 250

Query: 225 TTMAGQAYEAMSNAGYLDSN-MIVILNDSRH-SLHPKIEESPKTSINALSSTLSRIQSSK 282
               G AYEA+++AG++ ++ MIVILND++  SL  +     +  + AL++TL+ IQ+  
Sbjct: 251 AITGGMAYEALNHAGFMKTDKMIVILNDNKQVSLPTQYNAGDQKPVGALAATLAEIQADP 310

Query: 283 SFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQ-GSTLFEELGLYYIGPVDGHNI 341
           + R++RE  K   +++   + ++A  VD+    ++    G+ LF++L L+YIGPVDGH++
Sbjct: 311 NLREIRETIKNFAEQMPAPIRDFAKAVDDVGHDILSQNSGAKLFKDLKLWYIGPVDGHDV 370

Query: 342 EDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSEAIEKQQE-GASDSNS---LPFG 397
             L+ VLQ+V     MGPVL+H++TE+ R  E  + S  +++    G  D+ +   LP  
Sbjct: 371 GLLVKVLQDVKKRPDMGPVLIHILTEKGRGYEPAETS--MDRMHGVGKYDTKTGKALPST 428

Query: 398 NYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVT 457
           + S++Y + + ++L  EA  D  I+ VHA M     +  F+++F  R FDVG+AEQHAVT
Sbjct: 429 SKSKSYTNVYADSLAAEAALDPKILAVHAAMGGGTGMNRFEKRFASRTFDVGIAEQHAVT 488

Query: 458 FSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAF 517
           F+AGLA  GLKPFC I S FLQRA+DQ+++DV  Q LPVRF I   GLVG+DG T  G  
Sbjct: 489 FAAGLASEGLKPFCAIYSTFLQRAFDQIIHDVALQNLPVRFAIDRGGLVGADGATHGGFA 548

Query: 518 DITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYPRGAIVRTDLPG------- 570
           D+T+M+C+PNM+VMAPS+E EL   VAT A+ +D P CFR+PRG  +  D+         
Sbjct: 549 DVTYMACVPNMVVMAPSNEAELCHAVATAAAYNDGPSCFRFPRGDGIGVDMEAEGVDPKS 608

Query: 571 YRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIK 630
           ++G P EIGKG +   GK  ALLGYG MV +CL A   L+K GIDV V D RFCKPLD +
Sbjct: 609 FKGQPWEIGKGVIRRLGKHAALLGYGTMVNDCLAAAEELAKKGIDVAVMDMRFCKPLDTQ 668

Query: 631 LVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQ 690
           LV +  +N+  +ITVEE +IGGFGSHV++ +   GLLD+ VK+R ++LPD YI+H +  Q
Sbjct: 669 LVEQAAKNYPIVITVEENAIGGFGSHVANHLVKTGLLDTAVKFRSMILPDRYIDHGTQAQ 728

Query: 691 QLALAGLTGHHIAATALSLL 710
           Q   AGL    I A   SL+
Sbjct: 729 QREEAGLNTTTIVAKVESLM 748


>gi|39934029|ref|NP_946305.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodopseudomonas palustris
           CGA009]
 gi|192289449|ref|YP_001990054.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodopseudomonas palustris
           TIE-1]
 gi|81563891|sp|Q6NB76.1|DXS_RHOPA RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|229836076|sp|B3QFY7.1|DXS_RHOPT RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|39647877|emb|CAE26396.1| 1-D-deoxyxylulose 5-phosphate synthase [Rhodopseudomonas palustris
           CGA009]
 gi|192283198|gb|ACE99578.1| deoxyxylulose-5-phosphate synthase [Rhodopseudomonas palustris
           TIE-1]
          Length = 641

 Score =  601 bits (1549), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 310/638 (48%), Positives = 422/638 (66%), Gaps = 17/638 (2%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD +  P  L+ L I +++Q+A E+R E    VS T     + L  VELT ALH+VF
Sbjct: 7   TPLLDTIRTPEDLRKLRIDQVRQVADELRLETIDAVSVTGGHFGAGLGVVELTTALHYVF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR  I TLR   G+SG+T R+ES++DPF AGH   S+
Sbjct: 67  DTPRDRLIWDVGHQAYPHKILTGRRDRIRTLRTGGGLSGFTKRTESDHDPFGAGHSSTSI 126

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVA ++ GK+  ++ VI +G+  AG AYEAM+NAG ++S +IVILND+  S+ P
Sbjct: 127 SAGLGMAVASELAGKKNNVIAVIGDGSISAGMAYEAMNNAGAMNSRLIVILNDNNMSIAP 186

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARG-MI 317
                    + A+S+ LSR+ S K++R LRE  K + K + + + + AA+ +EY+RG M+
Sbjct: 187 --------PVGAMSAYLSRLYSGKTYRSLREAGKQIGKHLPKLIADRAARAEEYSRGFMM 238

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRR---AED 374
           G  G TLFEELG YY+GPVDGHN++ L+ +LQ V      GP L+HVVT++ +    AE 
Sbjct: 239 G--GGTLFEELGFYYVGPVDGHNLDHLLPILQNVRD-ADTGPFLIHVVTQKGKGYGPAEA 295

Query: 375 TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
                    + + A+ + +    N + +Y + F ++LV EA+KD  IV + A M     +
Sbjct: 296 AADKYHAVVKFDIATGAQAKAKSN-APSYQNVFGQSLVKEAQKDDKIVGITAAMPSGTGI 354

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
            +F++ FP+R FDVG+AEQHAVTF+AGLA  G KPFC I S FLQRAYDQ+V+DV  Q+L
Sbjct: 355 DIFEKAFPKRTFDVGIAEQHAVTFAAGLATEGYKPFCAIYSTFLQRAYDQIVHDVAIQKL 414

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PVRF I  AGLVG+DG T  G+FD  ++ CLPNM++MA +DE ELV MVAT  +IDDRP 
Sbjct: 415 PVRFAIDRAGLVGADGATHAGSFDNAYLGCLPNMVIMAAADEAELVHMVATQVAIDDRPS 474

Query: 555 CFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGI 614
             RYPRG     ++P   GIP+EIGKG+V+ +G  VALL +G  +    KA   L+ LG+
Sbjct: 475 AVRYPRGEGRGVEMPEV-GIPLEIGKGRVIRQGNKVALLSFGTRLAEAEKAADELATLGL 533

Query: 615 DVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWR 674
             TVADARF KPLD++LV +L ++H  L+T+EEGSIGGFGSHV   +A  G+LD  VK R
Sbjct: 534 STTVADARFMKPLDVELVLKLARDHEVLLTIEEGSIGGFGSHVMQTLAEHGMLDGEVKMR 593

Query: 675 PIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
            +VLPD +++H +P    A AGL    I      +LG+
Sbjct: 594 ALVLPDVFMDHDNPVAMYARAGLDAKAIVKKVFDVLGK 631


>gi|386397241|ref|ZP_10082019.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bradyrhizobium sp.
           WSM1253]
 gi|385737867|gb|EIG58063.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bradyrhizobium sp.
           WSM1253]
          Length = 642

 Score =  601 bits (1549), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 304/644 (47%), Positives = 420/644 (65%), Gaps = 20/644 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD +  P  L+ L +++++Q+A E+R E    VS T     + L  VELT A+H+VF
Sbjct: 7   TPLLDTIRTPDDLRKLKVEQVRQVADELRQETIDAVSVTGGHFGAGLGVVELTTAIHYVF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR  I TLR   G+SG+T RSES+YDPF A H   S+
Sbjct: 67  DTPRDRLIWDVGHQAYPHKILTGRRDRIRTLRTGGGLSGFTKRSESDYDPFGAAHSSTSI 126

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVARD+ G +  ++ VI +G   AG AYEAM+NAG ++S +IVILND+  S+ P
Sbjct: 127 SAGLGMAVARDLSGGKNNVIAVIGDGAMSAGMAYEAMNNAGAMNSRLIVILNDNDMSIAP 186

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                    + A+S+ LSR+ S K++R LR+VAK + +R+ + +   A +V+EY+RG + 
Sbjct: 187 --------PVGAMSAYLSRLYSGKTYRTLRDVAKQINQRLPKILANRANRVEEYSRGFM- 237

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR-----RAE 373
             G TLFEELG YY+GP+DGHN++ L+ VL+ V  +   GP+L+HVVT++ +      A 
Sbjct: 238 MDGGTLFEELGFYYVGPIDGHNLDHLLPVLKNVRDM-ETGPILLHVVTQKGKGYGPAEAS 296

Query: 374 DTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
             +    ++      + + S P    +  Y + F ++LV EAEKD  IV + A M     
Sbjct: 297 ADKYHAVVKFDVATGTQAKSKP---NAPAYQNVFGQSLVKEAEKDDKIVAITAAMPSGTG 353

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           + +F + FP+R FDVG+AEQHAVTF+AGLA  G KPFC I S FLQR YDQ+V+DV  Q 
Sbjct: 354 VDIFNKAFPDRTFDVGIAEQHAVTFAAGLATEGYKPFCAIYSTFLQRGYDQIVHDVAIQS 413

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPVRF I  AGLVG+DG T  G+FD  ++ CLPNM++MA +DE ELV MVAT  +I+DRP
Sbjct: 414 LPVRFAIDRAGLVGADGATHAGSFDNAYLGCLPNMVIMAAADEAELVHMVATQVAINDRP 473

Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
              RYPRG     ++P   G+P+EIGKG+++ EG  +ALL +G  +  C KA   L+  G
Sbjct: 474 SSLRYPRGEGRGIEMPEI-GVPLEIGKGRIVREGSKIALLSFGTRLAECEKAADELAAHG 532

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSG-VK 672
           +  T+ADARF KPLD +LV +L ++H  LIT+EEGS+GGFGSHV+ ++   G LDSG V+
Sbjct: 533 LSTTIADARFMKPLDTELVLKLARDHEILITIEEGSVGGFGSHVAQYLTDQGALDSGLVR 592

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREA 716
           +R +VLPD + +H +P      AGL    I A     LG+  +A
Sbjct: 593 FRTMVLPDVFQDHDTPAAMYGRAGLDAKGIVAKVFEALGKDVKA 636


>gi|398829536|ref|ZP_10587733.1| 1-deoxy-D-xylulose-5-phosphate synthase [Phyllobacterium sp. YR531]
 gi|398216463|gb|EJN03009.1| 1-deoxy-D-xylulose-5-phosphate synthase [Phyllobacterium sp. YR531]
          Length = 639

 Score =  601 bits (1549), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 323/645 (50%), Positives = 412/645 (63%), Gaps = 23/645 (3%)

Query: 75  DKEP-TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVA 133
           +K+P TP+LD V  P  L++L   +L QLA E+R+EL   VS T   L + L  VELTVA
Sbjct: 2   NKKPETPLLDRVNIPSELRALPESDLPQLAQELRTELIDAVSTTGGHLGAGLGVVELTVA 61

Query: 134 LHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGH 193
           LHHVF  P D+I+WDVG Q Y HKILTGRR  I TLR++ G+SG+T RSES+YDPF A H
Sbjct: 62  LHHVFDTPHDRIIWDVGHQAYPHKILTGRRERIRTLRQEGGLSGFTKRSESDYDPFGAAH 121

Query: 194 GCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSR 253
              S+SAGLGMAVA D+ G +  +V+VI +G   AG AYEAM+NAG LD+ +IVILND+ 
Sbjct: 122 SSTSISAGLGMAVASDLAGIKRNVVSVIGDGAMSAGMAYEAMNNAGALDARLIVILNDND 181

Query: 254 HSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYA 313
            S+ P           A+S+ L+R+ S K++R  RE AK + K++ + + E A + +EYA
Sbjct: 182 MSIAPP--------TGAMSAYLARLVSGKAYRSFRETAKQLAKKLPKFLQEKARRSEEYA 233

Query: 314 RGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAE 373
           R      G T+FEELG YY+GP+DGHN++ L+ VL+ V      GPVL+HVVT++ +   
Sbjct: 234 RAFW--TGGTMFEELGFYYVGPIDGHNLDHLLPVLKNVRDTMD-GPVLIHVVTQKGK--- 287

Query: 374 DTQKSEAIEKQQEGA------SDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAG 427
               +EA   +  G       + + + P  N + +Y   F  +L+ EA  D  IV V A 
Sbjct: 288 GYAPAEASADKYHGVNKFDVITGAQAKPPAN-APSYTKIFATSLIEEARHDDRIVAVTAA 346

Query: 428 MEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVN 487
           M     L LF E FP+R FDVG+AEQHAVTF+AGLA  GLKPF  I S FLQR YDQVV+
Sbjct: 347 MPGGTGLDLFGEVFPDRTFDVGIAEQHAVTFAAGLASEGLKPFAAIYSTFLQRGYDQVVH 406

Query: 488 DVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVA 547
           DV  Q LPVRF I  AGLVG+DG T  G+FD  F++ LP  +VMA SDE EL  MV T A
Sbjct: 407 DVSLQNLPVRFPIDRAGLVGADGATHAGSFDTGFLAALPGFVVMAASDEAELRHMVRTAA 466

Query: 548 SIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARA 607
             D  P+ FRYPRG  +  +LP  RG  +EIGKG+ + EG  VALL +G  +  CL A  
Sbjct: 467 EYDAGPISFRYPRGDGIGIELP-ERGSILEIGKGRTVREGSKVALLSFGTRLAECLTAAD 525

Query: 608 LLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLL 667
            LS  G+  TVADARF KPLD  L+R L + H  L+TVEEG+IGGF SHV HF++ DGLL
Sbjct: 526 ELSASGLSTTVADARFAKPLDEDLIRRLAREHEVLVTVEEGAIGGFASHVLHFLSRDGLL 585

Query: 668 DSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
           D G++ R +VLPD Y++HA P    A AGL    I       LGR
Sbjct: 586 DHGLRVRTLVLPDIYLDHAKPEVLYARAGLDSAGIVQAVFGALGR 630


>gi|209402473|gb|ACI45959.1| putative plastid 1-deoxy-D-xylulose 5-phosphate synthase precursor
           [Pyropia yezoensis]
          Length = 660

 Score =  601 bits (1549), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 325/657 (49%), Positives = 417/657 (63%), Gaps = 32/657 (4%)

Query: 88  PLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDKILW 147
           P   +S ++ ++K+LA E+R +    VSKT   L +SL  VELTVALH VF+ P D+I+W
Sbjct: 3   PADYRSWSLPQIKRLAHELRWDTIRSVSKTGGHLGASLGVVELTVALHFVFNTPHDRIVW 62

Query: 148 DVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVA 207
           DV  Q Y HKILTGRR  + T+R+  G+SG+T R+ESEYDPF AGH   S+SA LGMAVA
Sbjct: 63  DVAHQAYCHKILTGRRDSMGTMRQSGGLSGFTKRTESEYDPFGAGHSSTSISAALGMAVA 122

Query: 208 RDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKIEESPKTS 267
           RD+ GK    + VI +G    G AYEAM+NAGYL + +IV+LND+     P   ++    
Sbjct: 123 RDLAGKNNECIAVIGDGAITGGMAYEAMNNAGYLKNRVIVVLNDNGQVSLPTGTQTAAGV 182

Query: 268 I--NALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQGS-TL 324
           +   ALS+  SR+ SSK F  +R  AK  ++     +   AAKVDEYARG++ P G  TL
Sbjct: 183 VPSGALSNYTSRLLSSKPFSDVRSAAKDFSRLFPEEVQGIAAKVDEYARGIVSPGGGGTL 242

Query: 325 FEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRR------AEDTQKS 378
           FEELG YYIGP+DGHN++ LI +L+ V  L    PV++HV TE+ R       A D    
Sbjct: 243 FEELGFYYIGPIDGHNLDTLIPILENVRDLPGNKPVMLHVKTEKGRGYAPAEGAFDRYHG 302

Query: 379 EAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQ 438
            A      G    +  P    + +Y   F  AL+ EAE+D+ +V + A M     L LF 
Sbjct: 303 VAKFDVATGKQAKSVAP----TPSYTGVFARALIAEAERDRKVVAITAAMPGGTGLNLFG 358

Query: 439 EKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRF 498
           E+FP R +DVG+AEQHAVT +AG+A  G KP C I S FLQR YDQVV+DV  QRLPVRF
Sbjct: 359 ERFPNRCYDVGIAEQHAVTLAAGMATEGAKPVCCIYSTFLQRGYDQVVHDVALQRLPVRF 418

Query: 499 VITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRY 558
           ++  AGLVG+DG T  G+FD+ ++ CLPNM +MAPSDE EL  M+AT  + DD P   RY
Sbjct: 419 ILDRAGLVGNDGATHAGSFDLAYLGCLPNMTIMAPSDEVELQHMIATAIAFDDGPTVVRY 478

Query: 559 PRG-----AIVRTDLPGYRG--IP-----IEIGKGKVLVE-----GKDVALLGYGAMVQN 601
           PRG       +R+ L GYRG  +P     + IGKG++L       G+ VALL  G  +  
Sbjct: 479 PRGNGLGLETLRSKL-GYRGAEMPARGRALPIGKGRILRHASGNGGRKVALLSIGTRLLE 537

Query: 602 CLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFI 661
           C+ A   L   G+ VTVADARF KPLD +LVR L  +H  L+TVEEGSIGGFG HV HF+
Sbjct: 538 CVNAADALEAAGVAVTVADARFMKPLDTELVRSLAADHEVLVTVEEGSIGGFGDHVLHFL 597

Query: 662 ALDGLLDSG-VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREAL 717
           AL+GLLD G ++ RP+VLPD YI+H S ++Q   AGL   HI ATAL LLGR+ E L
Sbjct: 598 ALEGLLDGGDLRVRPMVLPDRYIDHGSQSEQYEEAGLNASHIEATALRLLGRSAEVL 654


>gi|383773560|ref|YP_005452626.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bradyrhizobium sp. S23321]
 gi|381361684|dbj|BAL78514.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bradyrhizobium sp. S23321]
          Length = 642

 Score =  600 bits (1548), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 304/644 (47%), Positives = 418/644 (64%), Gaps = 20/644 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD +  P  L+ L +++++Q+A E+R E    VS T     + L  VELT A+H+VF
Sbjct: 7   TPLLDTIRTPDDLRKLNVEQVRQVADELRQETIDAVSVTGGHFGAGLGVVELTTAIHYVF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR  I TLR   G+SG+T RSES+YDPF A H   S+
Sbjct: 67  DTPRDRLIWDVGHQAYPHKILTGRRDRIRTLRTGGGLSGFTKRSESDYDPFGAAHSSTSI 126

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVARD+ G    ++ VI +G   AG AYEAM+NAG ++S +IVILND+  S+ P
Sbjct: 127 SAGLGMAVARDLAGGNNNVIAVIGDGAMSAGMAYEAMNNAGAMNSRLIVILNDNDMSIAP 186

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                    + A+S+ LSR+ S K++R LRE AK + +R+ + +   A +V+EY+RG + 
Sbjct: 187 --------PVGAMSAYLSRLYSGKTYRTLREAAKQINQRLPKVIANRANRVEEYSRGFM- 237

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR-----RAE 373
             G TLFEELG YY+GP+DGHN++ L+ VL+ V  +   GP+LVHVVT++ +      A 
Sbjct: 238 MDGGTLFEELGFYYVGPIDGHNLDHLLPVLKNVRDM-ETGPILVHVVTQKGKGYGPAEAS 296

Query: 374 DTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
             +    ++      + + S P    +  Y + F ++LV EAEKD  IV + A M     
Sbjct: 297 ADKYHAVVKFDVATGTQAKSKP---NAPAYQNVFGQSLVKEAEKDDKIVAITAAMPSGTG 353

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           + +F + FP+R FDVG+AEQHAVTF+AGLA  G KPFC I S FLQR YDQ+V+DV  Q 
Sbjct: 354 VDIFNKAFPDRTFDVGIAEQHAVTFAAGLATEGYKPFCAIYSTFLQRGYDQIVHDVAIQN 413

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPVRF I  AGLVG+DG T  G+FD  ++ CLPNM++MA +DE ELV MVAT  +I+DRP
Sbjct: 414 LPVRFAIDRAGLVGADGATHAGSFDNAYLGCLPNMVIMAAADEAELVHMVATQVAINDRP 473

Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
              RYPRG     ++P   G+P+EIGKG+V+ +G  +ALL +G  +  C KA   L+  G
Sbjct: 474 SSLRYPRGEGRGIEMPDV-GVPLEIGKGRVIRQGNKIALLSFGTRLAECEKAADELAAHG 532

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSG-VK 672
           +  T+ADARF KPLD +LV +L ++H  LIT+EEGS+GGFGSHV+ ++   G LD+G V+
Sbjct: 533 LSTTIADARFMKPLDTELVLKLARDHDVLITIEEGSVGGFGSHVAQYLTDQGALDTGMVR 592

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREA 716
           +R +VLPD + +H +P      AGL    I A     LG+  +A
Sbjct: 593 FRSMVLPDVFQDHDTPAAMYGRAGLDAKGIVAKVFEALGKDVKA 636


>gi|374573936|ref|ZP_09647032.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bradyrhizobium sp. WSM471]
 gi|374422257|gb|EHR01790.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bradyrhizobium sp. WSM471]
          Length = 642

 Score =  600 bits (1547), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 303/644 (47%), Positives = 420/644 (65%), Gaps = 20/644 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD +  P  L+ L +++++Q+A E+R E    VS T     + L  VELT A+H+VF
Sbjct: 7   TPLLDTIRTPDDLRKLKVEQVRQVADELRQETIDAVSVTGGHFGAGLGVVELTTAIHYVF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR  I TLR   G+SG+T RSES+YDPF A H   S+
Sbjct: 67  DTPRDRLIWDVGHQAYPHKILTGRRDRIRTLRTGGGLSGFTKRSESDYDPFGAAHSSTSI 126

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVARD+ G +  ++ VI +G   AG AYEAM+NAG ++S +IVILND+  S+ P
Sbjct: 127 SAGLGMAVARDLSGGKNNVIAVIGDGAMSAGMAYEAMNNAGAMNSRLIVILNDNDMSIAP 186

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                    + A+S+ LSR+ S K++R LR+VAK + +R+ + +   A +V+EY+RG + 
Sbjct: 187 --------PVGAMSAYLSRLYSGKTYRTLRDVAKQINQRLPKILANRANRVEEYSRGFM- 237

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR-----RAE 373
             G TLFEELG YY+GP+DGHN++ L+ VL+ V  +   GP+L+HVVT++ +      A 
Sbjct: 238 MDGGTLFEELGFYYVGPIDGHNLDHLLPVLKNVRDM-ETGPILLHVVTQKGKGYGPAEAS 296

Query: 374 DTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
             +    ++      + + S P    +  Y + F ++LV EAEKD  IV + A M     
Sbjct: 297 ADKYHAVVKFDVATGTQAKSKP---NAPAYQNVFGQSLVKEAEKDDKIVAITAAMPSGTG 353

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           + +F + FP+R FDVG+AEQHAVTF+AGLA  G KPFC I S FLQR YDQ+V+DV  Q 
Sbjct: 354 VDIFNKAFPDRTFDVGIAEQHAVTFAAGLATEGYKPFCAIYSTFLQRGYDQIVHDVAIQS 413

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPVRF I  AGLVG+DG T  G+FD  ++ CLPNM++MA +DE ELV MVAT  +I+DRP
Sbjct: 414 LPVRFAIDRAGLVGADGATHAGSFDNAYLGCLPNMVIMAAADEAELVHMVATQVAINDRP 473

Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
              RYPRG     ++P   G+P+EIGKG+++ +G  +ALL +G  +  C KA   L+  G
Sbjct: 474 SSLRYPRGEGRGIEMPEV-GVPLEIGKGRIVRQGSKIALLSFGTRLAECEKAADELAAHG 532

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSG-VK 672
           +  T+ADARF KPLD +LV +L ++H  LIT+EEGS+GGFGSHV+ ++   G LDSG V+
Sbjct: 533 LSTTIADARFMKPLDTELVLKLARDHEILITIEEGSVGGFGSHVAQYLTDQGALDSGLVR 592

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREA 716
           +R +VLPD + +H +P      AGL    I A     LG+  +A
Sbjct: 593 FRTMVLPDVFQDHDTPAAMYGRAGLDAKGIVAKVFEALGKDVKA 636


>gi|261317112|ref|ZP_05956309.1| 1-deoxyxylulose-5-phosphate synthase [Brucella pinnipedialis B2/94]
 gi|265988149|ref|ZP_06100706.1| 1-deoxyxylulose-5-phosphate synthase [Brucella pinnipedialis
           M292/94/1]
 gi|340790077|ref|YP_004755541.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella pinnipedialis
           B2/94]
 gi|261296335|gb|EEX99831.1| 1-deoxyxylulose-5-phosphate synthase [Brucella pinnipedialis B2/94]
 gi|264660346|gb|EEZ30607.1| 1-deoxyxylulose-5-phosphate synthase [Brucella pinnipedialis
           M292/94/1]
 gi|340558535|gb|AEK53773.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella pinnipedialis
           B2/94]
          Length = 643

 Score =  599 bits (1545), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 319/640 (49%), Positives = 412/640 (64%), Gaps = 22/640 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD    P RL++L  ++L QLA E+R+EL   VS T   L + L  VELTVALHHVF
Sbjct: 6   TPLLDKAPTPDRLRALPEQDLPQLAEELRTELIDAVSTTGGHLGAGLGVVELTVALHHVF 65

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+I+WDVG Q Y HKILTGRR  I TLR+  G+SG+T R+ESEYDPF A H   S+
Sbjct: 66  NTPYDRIIWDVGHQAYPHKILTGRRDRIRTLRQAGGLSGFTKRAESEYDPFGAAHSSTSI 125

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVA ++ G++  ++ VI +G+  AG AYEAM+NAG LD+ +IVILND+  S+ P
Sbjct: 126 SAGLGMAVASELSGEKRNVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAP 185

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S+ L+R+ S +++R +RE AK + +++ + + + A K +EYAR    
Sbjct: 186 --------PTGAMSAYLARLVSGRTYRSVREAAKQVAQKLPKFLQDKARKSEEYARAFF- 236

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G TLFEELG YY+GP+DGHN++ L+ VL+ V      GPVL+HVVT++ +       +
Sbjct: 237 -TGGTLFEELGFYYVGPIDGHNLDHLLPVLKNVRDT-QKGPVLIHVVTQKGK---GYAPA 291

Query: 379 EAIEKQQEGASDSNSL------PFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
           EA   +  G ++ + +      P  N + +Y   F  +L+ EA  D  IV V A M    
Sbjct: 292 EAAADKYHGVNEFDVITGKQAKPPAN-APSYTKIFGTSLIEEARHDDKIVAVTAAMPTGT 350

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            L LF E FP+R FDVG+AEQHAVTF+AGLA  G KPFC I S FLQR YDQVV+DV  Q
Sbjct: 351 GLDLFGEAFPKRVFDVGIAEQHAVTFAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQ 410

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
            LPVRF I  AGLVG+DGPT  G+FD  F++ LP  +VMA SDE EL  MV T A  D+ 
Sbjct: 411 NLPVRFPIDRAGLVGADGPTHAGSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEG 470

Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
           P+ FRYPRG  V  DLP  RG  +EIGKG+++ EG  VALL +G  +Q CL A   L   
Sbjct: 471 PISFRYPRGDGVGVDLP-ERGSVLEIGKGRIVREGTKVALLSFGTRLQECLAAAEELGAA 529

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 672
           G+  TVADARF KPLD  L+R L + H  L+ VEEG++GGFGSHV  F+A DGLLD G+K
Sbjct: 530 GLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFGSHVLQFLATDGLLDRGLK 589

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
            R + LPD Y +H  P    A AGL    I  T  + L R
Sbjct: 590 VRALTLPDIYQDHGKPDAMYAEAGLDRTGIVRTVFAALHR 629


>gi|260754213|ref|ZP_05866561.1| 1-deoxyxylulose-5-phosphate synthase [Brucella abortus bv. 6 str.
           870]
 gi|260757433|ref|ZP_05869781.1| 1-deoxyxylulose-5-phosphate synthase [Brucella abortus bv. 4 str.
           292]
 gi|260883238|ref|ZP_05894852.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 9
           str. C68]
 gi|297247834|ref|ZP_06931552.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 5
           str. B3196]
 gi|260667751|gb|EEX54691.1| 1-deoxyxylulose-5-phosphate synthase [Brucella abortus bv. 4 str.
           292]
 gi|260674321|gb|EEX61142.1| 1-deoxyxylulose-5-phosphate synthase [Brucella abortus bv. 6 str.
           870]
 gi|260872766|gb|EEX79835.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 9
           str. C68]
 gi|297175003|gb|EFH34350.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 5
           str. B3196]
          Length = 643

 Score =  599 bits (1545), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 319/640 (49%), Positives = 412/640 (64%), Gaps = 22/640 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD    P RL++L  ++L QLA E+R+EL   VS T   L + L  VELTVALHHVF
Sbjct: 6   TPLLDKAPTPDRLRALPEQDLPQLAEELRTELIDAVSTTGGHLGAGLGVVELTVALHHVF 65

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+I+WDVG Q Y HKILTGRR  I TLR+  G+SG+T R+ESEYDPF A H   S+
Sbjct: 66  NTPYDRIIWDVGHQAYPHKILTGRRDRIRTLRQAGGLSGFTKRAESEYDPFGAAHSSTSI 125

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVA ++ G++  ++ VI +G+  AG AYEAM+NAG LD+ +IVILND+  S+ P
Sbjct: 126 SAGLGMAVASELSGEKRNVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAP 185

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S+ L+R+ S +++R +RE AK + +++ + + + A K +EYAR    
Sbjct: 186 --------PTGAMSAYLARLVSGRTYRSVREAAKQVAQKLPKFLQDKARKSEEYARAFF- 236

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G TLFEELG YY+GP+DGHN++ L+ VL+ V      GPVL+HVVT++ +       +
Sbjct: 237 -TGGTLFEELGFYYVGPIDGHNLDHLLPVLKNVRDT-QKGPVLIHVVTQKGK---GYAPA 291

Query: 379 EAIEKQQEGASDSNSL------PFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
           EA   +  G +  + +      P  N + +Y   F  +L+ EA  D  IV V A M    
Sbjct: 292 EAAADKYHGVNKFDVITGKQAKPPAN-APSYTKIFGTSLIEEARHDDKIVAVTAAMPTGT 350

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            L LF E FP+R FDVG+AEQHAVTF+AGLA  G KPFC I S FLQR YDQVV+DV  Q
Sbjct: 351 GLDLFGEAFPKRVFDVGIAEQHAVTFAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQ 410

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
            LPVRF I  AGLVG+DGPT  G+FD  F++ LP  +VMA SDE EL  MV T A  D+ 
Sbjct: 411 NLPVRFPIDRAGLVGADGPTHAGSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEG 470

Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
           P+ FRYPRG  V  DLP  RG  +EIGKG+++ EG  VALL +G  +Q CL A   L   
Sbjct: 471 PISFRYPRGDGVGVDLP-ERGSVLEIGKGRIVREGTKVALLSFGTRLQECLAAAEELGAA 529

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 672
           G+  TVADARF KPLD  L+R L + H  L+ VEEG++GGFGSHV  F+A DGLLD G+K
Sbjct: 530 GLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFGSHVLQFLATDGLLDRGLK 589

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
            R ++LPD Y +H  P    A AGL    I  T  + L R
Sbjct: 590 VRALMLPDIYQDHGKPDAMYAEAGLDRTGIVRTVFAALHR 629


>gi|384220819|ref|YP_005611985.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bradyrhizobium japonicum
           USDA 6]
 gi|354959718|dbj|BAL12397.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bradyrhizobium japonicum
           USDA 6]
          Length = 642

 Score =  599 bits (1545), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 303/644 (47%), Positives = 419/644 (65%), Gaps = 20/644 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD +  P  L+ L I++++Q+A E+R E    VS T     + L  VELT A+H+VF
Sbjct: 7   TPLLDTIHTPDDLRKLKIEQVRQVADELRQETIDAVSVTGGHFGAGLGVVELTTAIHYVF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR  I TLR   G+SG+T RSES+YDPF A H   S+
Sbjct: 67  DTPRDRLIWDVGHQAYPHKILTGRRDRIRTLRTGGGLSGFTKRSESDYDPFGAAHSSTSI 126

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVARD+ G +  ++ VI +G   AG AYEAM+NAG ++S +IVILND+  S+ P
Sbjct: 127 SAGLGMAVARDLSGGKNNVIAVIGDGAMSAGMAYEAMNNAGAMNSRLIVILNDNDMSIAP 186

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                    + A+S+ LSR+ S K++R LR+ AK + KR+ + +   A +V+EY+RG + 
Sbjct: 187 --------PVGAMSAYLSRLYSGKTYRTLRDAAKQINKRLPKIIANRANRVEEYSRGFM- 237

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR-----RAE 373
             G TLFEELG YY+GP+DGHN++ L+ VL+ V  +   GP+LVHVVT++ +      A 
Sbjct: 238 MDGGTLFEELGFYYVGPIDGHNLDHLLPVLKNVRDM-ETGPILVHVVTQKGKGYGPAEAS 296

Query: 374 DTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
             +    ++      + + + P    +  Y + F ++LV EA+KD  IV + A M     
Sbjct: 297 ADKYHAVVKFDVATGTQAKAKP---NAPAYQNVFGQSLVKEAQKDDKIVAITAAMPSGTG 353

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           + +F + FP+R FDVG+AEQHAVTF+AGLA  G KPFC I S FLQR YDQ+V+DV  Q 
Sbjct: 354 VDIFNKAFPDRTFDVGIAEQHAVTFAAGLASEGYKPFCAIYSTFLQRGYDQIVHDVAIQN 413

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPVRF I  AGLVG+DG T  G+FD  ++ CLPNM++MA +DE ELV MVAT  +IDDRP
Sbjct: 414 LPVRFAIDRAGLVGADGATHAGSFDNAYLGCLPNMVIMAAADEAELVHMVATQVAIDDRP 473

Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
              RYPRG     ++P   G+P+E+GKG+++ +G  +ALL +G  +  C KA   L+  G
Sbjct: 474 SSLRYPRGEGRGIEMPEV-GVPLEVGKGRMIRQGSKIALLSFGTRLAECEKAADELAAHG 532

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSG-VK 672
           +  ++ADARF KPLD +LV +L ++H  LIT+EEGS+GGFGSHV+ ++   G LDSG VK
Sbjct: 533 LSTSIADARFMKPLDTELVLKLARDHEILITIEEGSVGGFGSHVAQYLTDQGALDSGMVK 592

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREA 716
           +R +VLPD + +H +P      AGL    I A     LG+  +A
Sbjct: 593 FRSMVLPDVFQDHDTPAAMYGRAGLDAKGIVAKVFEALGKDVKA 636


>gi|294851814|ref|ZP_06792487.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella sp. NVSL 07-0026]
 gi|294820403|gb|EFG37402.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella sp. NVSL 07-0026]
          Length = 643

 Score =  599 bits (1545), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 319/640 (49%), Positives = 411/640 (64%), Gaps = 22/640 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD    P RL++L  ++L QLA E+R+EL   VS T   L + L  VELTVALHHVF
Sbjct: 6   TPLLDKAPTPDRLRALPEQDLPQLAEELRTELIDAVSTTGGHLGAGLGVVELTVALHHVF 65

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+I+WDVG Q Y HKILTGRR  I TLR+  G+SG+T R+ESEYDPF A H   S+
Sbjct: 66  NTPYDRIIWDVGHQAYPHKILTGRRDRIRTLRQAGGLSGFTKRAESEYDPFGAAHSSTSI 125

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVA ++ G++  ++ VI +G+  AG AYEAM+NAG LD+ +IVILND+  S+ P
Sbjct: 126 SAGLGMAVASELSGEKRNVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAP 185

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S+ L+R+ S +++R +RE AK + +++ + + + A K +EYAR    
Sbjct: 186 --------PTGAMSAYLARLVSGRTYRSVREAAKQVAQKLPKFLQDKARKSEEYARAFF- 236

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G TLFEELG YY+GP+DGHN++ L+ VL+ V      GPVL+HVVT++ +       +
Sbjct: 237 -TGGTLFEELGFYYVGPIDGHNLDHLLPVLKNVRDT-QKGPVLIHVVTQKGK---GYAPA 291

Query: 379 EAIEKQQEGASDSNSL------PFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
           EA   +  G +  + +      P  N + +Y   F  +L+ EA  D  IV V A M    
Sbjct: 292 EAAADKYHGVNKFDVITGKQAKPPAN-APSYTKIFGTSLIEEARHDDKIVAVTAAMPTGT 350

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            L LF E FP+R FDVG+AEQHAVTF+AGLA  G KPFC I S FLQR YDQVV+DV  Q
Sbjct: 351 GLNLFGEAFPKRVFDVGIAEQHAVTFAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQ 410

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
            LPVRF I  AGLVG+DGPT  G+FD  F++ LP  +VMA SDE EL  MV T A  D+ 
Sbjct: 411 NLPVRFPIDRAGLVGADGPTHAGSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEG 470

Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
           P+ FRYPRG  V  DLP  RG  +EIGKG+++ EG  VALL +G  +Q CL A   L   
Sbjct: 471 PISFRYPRGDGVGVDLP-ERGSVLEIGKGRIVREGTKVALLSFGTRLQECLAAAEELGAA 529

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 672
           G+  TVADARF KPLD  L+R L + H  L+ VEEG++GGFGSHV  F+A DGLLD G+K
Sbjct: 530 GLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFGSHVLQFLATDGLLDRGLK 589

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
            R + LPD Y +H  P    A AGL    I  T  + L R
Sbjct: 590 VRALTLPDIYQDHGKPDAMYAEAGLDRTGIVRTVFAALHR 629


>gi|148560626|ref|YP_001258456.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella ovis ATCC 25840]
 gi|166198603|sp|A5VP09.1|DXS_BRUO2 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|148371883|gb|ABQ61862.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella ovis ATCC 25840]
          Length = 643

 Score =  599 bits (1544), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 319/640 (49%), Positives = 411/640 (64%), Gaps = 22/640 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V  P RL++L  ++L QLA E+R+EL   VS T   L + L  VELTVALHHVF
Sbjct: 6   TPLLDKVPTPDRLRALPERDLPQLAEELRTELIDAVSTTGGHLGAGLGVVELTVALHHVF 65

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+I+WDVG Q Y HKILTGRR  I TLR+  G+SG+T R+ESEYDPF A H   S+
Sbjct: 66  NTPYDRIIWDVGHQAYPHKILTGRRDRIRTLRQAGGLSGFTKRAESEYDPFGAAHSSTSI 125

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVA ++ G++  ++ VI +G+  AG AYEAM+NAG LD+ +IVILND+  S+ P
Sbjct: 126 SAGLGMAVASELSGEKRNVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAP 185

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S+ L+R+ S +++R +RE AK + +++ + + + A K +EYAR    
Sbjct: 186 --------PTGAMSAYLARLVSGRTYRSVREAAKQVAQKLPKFLQDKARKSEEYARAFF- 236

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G TLFEELG YY+GP+DGHN++ L+ VL+ V      GPVL+HVVT++ +       +
Sbjct: 237 -TGGTLFEELGFYYVGPIDGHNLDHLLPVLKNVRDT-QKGPVLIHVVTQKGK---GYAPA 291

Query: 379 EAIEKQQEGASDSNSL------PFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
           EA   +  G +  + +      P  N + +Y   F  +L+ EA  D  IV V A M    
Sbjct: 292 EAAADKYHGVNKFDVITGKQAKPPAN-APSYTKIFGTSLIEEARHDDKIVAVTAAMPTGT 350

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            L LF E FP+R FDVG+AEQHAVTF+AGLA  G KPFC I S FLQR YDQVV+DV  Q
Sbjct: 351 GLDLFGEAFPKRVFDVGIAEQHAVTFAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQ 410

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
            LPVRF I  AGLVG+DGPT  G+FD  F++ LP  +VMA SDE EL  MV T A  D+ 
Sbjct: 411 NLPVRFPIDRAGLVGADGPTHAGSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEG 470

Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
           P+ FRYPRG  V  DLP  RG  +EIGKG+++ EG  VALL +G  +Q CL A   L   
Sbjct: 471 PISFRYPRGDGVGVDLP-ERGSVLEIGKGRIVREGTKVALLSFGTRLQECLAAAEELGAA 529

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 672
           G+  TV DARF KPLD  L+R L + H  L+ VEEG++GGFGSHV  F+A DGLLD G+K
Sbjct: 530 GLSTTVVDARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFGSHVLQFLATDGLLDRGLK 589

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
            R + LPD Y +H  P    A AGL    I  T  + L R
Sbjct: 590 VRALTLPDIYQDHGKPDAMYAEAGLDRTGIVRTVFAALHR 629


>gi|409400110|ref|ZP_11250273.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidocella sp. MX-AZ02]
 gi|409130838|gb|EKN00576.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidocella sp. MX-AZ02]
          Length = 646

 Score =  599 bits (1544), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 321/639 (50%), Positives = 419/639 (65%), Gaps = 19/639 (2%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V  P  L++ +I++LKQLA E+R+E    VS T   L SSL  VELTVA+H VF
Sbjct: 8   TPLLDRVNVPADLRNFSIEQLKQLADELRAETIDTVSVTGGHLGSSLGVVELTVAIHAVF 67

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR  I TLR+  G+SG+T RSESEYDPF A H   S+
Sbjct: 68  DTPRDRLIWDVGHQCYPHKILTGRRDRIRTLRQPGGLSGFTRRSESEYDPFGAAHSSTSI 127

Query: 199 SAGLGMAVARDIKGKRE--CIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSL 256
           SAGLGMAVARD+K + +   ++ VI +G+  AG AYEAM+NAG + S +IV+LND+  S+
Sbjct: 128 SAGLGMAVARDLKKEADPRNVIAVIGDGSMSAGMAYEAMNNAGAMRSRLIVVLNDNDMSI 187

Query: 257 HPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGM 316
            P         + A+S+ LS + SS+SF  LR+ A  M KR  R +   A K +EYARG+
Sbjct: 188 AP--------PVGAMSAYLSTLISSRSFMSLRDFAAKMAKRFPRPIERTARKAEEYARGI 239

Query: 317 IGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQ 376
           +   G TLFEELG YY+GP+DGHN+E L+ VL+ +    +  PVL+H+VT++ +     +
Sbjct: 240 L--TGGTLFEELGFYYVGPIDGHNMEHLMPVLRNLRDSEANEPVLLHIVTQKGKGYAPAE 297

Query: 377 ----KSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
               K   ++K      +    P G    TY   F +AL+ EAE D  +V V A M    
Sbjct: 298 AAADKYHGVQKFNVVTGEQKKAPPG--PPTYTSVFAKALIAEAEADPAVVAVTAAMSPGT 355

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            L  F+ KFP+R FDVG+AEQHAVTF+AG+A  GLKPFC I S FLQR YDQ+V+DV  Q
Sbjct: 356 GLDKFEAKFPDRMFDVGIAEQHAVTFAAGMATEGLKPFCAIYSTFLQRGYDQLVHDVVLQ 415

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
            LPVRF +  AGLVG+DG T  GA+D+ F+  +P M++MAPSDE EL+  VAT A+IDDR
Sbjct: 416 SLPVRFAMDRAGLVGADGATHAGAYDLAFLGPMPRMVIMAPSDEAELMHAVATAAAIDDR 475

Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
           P  FRYPRG  +  +LP  RG P EIGKG++L EG  VA+L  G  +Q+ L A   L+  
Sbjct: 476 PSAFRYPRGEGLGIELPA-RGTPWEIGKGRILREGGKVAILVLGTRLQDALNAADQLAAK 534

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 672
           G   TVADARF KPLD  L+ +L ++H  LIT+EEG+ GGFG+ V+H +A  G  D G+K
Sbjct: 535 GFPATVADARFMKPLDTDLIDQLARHHEVLITIEEGAAGGFGAAVAHHLAWSGAFDKGLK 594

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
           +RP+ LPD  I+H SP  Q+  AGLT   IA  AL+ LG
Sbjct: 595 FRPMTLPDRLIDHNSPAAQMIEAGLTAQDIATHALTALG 633


>gi|225626944|ref|ZP_03784983.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella ceti str. Cudo]
 gi|256368891|ref|YP_003106397.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella microti CCM 4915]
 gi|261218447|ref|ZP_05932728.1| 1-deoxyxylulose-5-phosphate synthase [Brucella ceti M13/05/1]
 gi|261221652|ref|ZP_05935933.1| 1-deoxyxylulose-5-phosphate synthase [Brucella ceti B1/94]
 gi|261320703|ref|ZP_05959900.1| 1-deoxyxylulose-5-phosphate synthase [Brucella ceti M644/93/1]
 gi|261751780|ref|ZP_05995489.1| 1-deoxyxylulose-5-phosphate synthase [Brucella suis bv. 5 str. 513]
 gi|261757668|ref|ZP_06001377.1| 1-deoxyxylulose-5-phosphate synthase [Brucella sp. F5/99]
 gi|265983591|ref|ZP_06096326.1| 1-deoxyxylulose-5-phosphate synthase [Brucella sp. 83/13]
 gi|306839868|ref|ZP_07472666.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella sp. NF 2653]
 gi|306842279|ref|ZP_07474941.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella sp. BO2]
 gi|225618601|gb|EEH15644.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella ceti str. Cudo]
 gi|255999049|gb|ACU47448.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella microti CCM 4915]
 gi|260920236|gb|EEX86889.1| 1-deoxyxylulose-5-phosphate synthase [Brucella ceti B1/94]
 gi|260923536|gb|EEX90104.1| 1-deoxyxylulose-5-phosphate synthase [Brucella ceti M13/05/1]
 gi|261293393|gb|EEX96889.1| 1-deoxyxylulose-5-phosphate synthase [Brucella ceti M644/93/1]
 gi|261737652|gb|EEY25648.1| 1-deoxyxylulose-5-phosphate synthase [Brucella sp. F5/99]
 gi|261741533|gb|EEY29459.1| 1-deoxyxylulose-5-phosphate synthase [Brucella suis bv. 5 str. 513]
 gi|264662183|gb|EEZ32444.1| 1-deoxyxylulose-5-phosphate synthase [Brucella sp. 83/13]
 gi|306287587|gb|EFM59038.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella sp. BO2]
 gi|306405054|gb|EFM61335.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella sp. NF 2653]
          Length = 643

 Score =  599 bits (1544), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 319/640 (49%), Positives = 411/640 (64%), Gaps = 22/640 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD    P RL++L  ++L QLA E+R+EL   VS T   L + L  VELTVALHHVF
Sbjct: 6   TPLLDKAPTPDRLRALPEQDLPQLAEELRTELIDAVSTTGGHLGAGLGVVELTVALHHVF 65

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+I+WDVG Q Y HKILTGRR  I TLR+  G+SG+T R+ESEYDPF A H   S+
Sbjct: 66  NTPYDRIIWDVGHQAYPHKILTGRRDRIRTLRQAGGLSGFTKRAESEYDPFGAAHSSTSI 125

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVA ++ G++  ++ VI +G+  AG AYEAM+NAG LD+ +IVILND+  S+ P
Sbjct: 126 SAGLGMAVASELSGEKRNVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAP 185

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S+ L+R+ S +++R +RE AK + +++ + + + A K +EYAR    
Sbjct: 186 --------PTGAMSAYLARLVSGRTYRSVREAAKQVAQKLPKFLQDKARKSEEYARAFF- 236

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G TLFEELG YY+GP+DGHN++ L+ VL+ V      GPVL+HVVT++ +       +
Sbjct: 237 -TGGTLFEELGFYYVGPIDGHNLDHLLPVLKNVRDT-QKGPVLIHVVTQKGK---GYAPA 291

Query: 379 EAIEKQQEGASDSNSL------PFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
           EA   +  G +  + +      P  N + +Y   F  +L+ EA  D  IV V A M    
Sbjct: 292 EAAADKYHGVNKFDVITGKQAKPPAN-APSYTKIFGTSLIEEARHDDKIVAVTAAMPTGT 350

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            L LF E FP+R FDVG+AEQHAVTF+AGLA  G KPFC I S FLQR YDQVV+DV  Q
Sbjct: 351 GLDLFGEAFPKRVFDVGIAEQHAVTFAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQ 410

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
            LPVRF I  AGLVG+DGPT  G+FD  F++ LP  +VMA SDE EL  MV T A  D+ 
Sbjct: 411 NLPVRFPIDRAGLVGADGPTHAGSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEG 470

Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
           P+ FRYPRG  V  DLP  RG  +EIGKG+++ EG  VALL +G  +Q CL A   L   
Sbjct: 471 PISFRYPRGDGVGVDLP-ERGSVLEIGKGRIVREGTKVALLSFGTRLQECLAAAEELGAA 529

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 672
           G+  TVADARF KPLD  L+R L + H  L+ VEEG++GGFGSHV  F+A DGLLD G+K
Sbjct: 530 GLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFGSHVLQFLATDGLLDRGLK 589

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
            R + LPD Y +H  P    A AGL    I  T  + L R
Sbjct: 590 VRALTLPDIYQDHGKPDAMYAEAGLDRTGIVRTVFAALHR 629


>gi|312114711|ref|YP_004012307.1| deoxyxylulose-5-phosphate synthase [Rhodomicrobium vannielii ATCC
           17100]
 gi|311219840|gb|ADP71208.1| deoxyxylulose-5-phosphate synthase [Rhodomicrobium vannielii ATCC
           17100]
          Length = 643

 Score =  598 bits (1543), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 303/640 (47%), Positives = 418/640 (65%), Gaps = 21/640 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD ++ P  L+ L   +L+Q+A E+R+EL   VS T   L + L  VELTVA+H++F
Sbjct: 7   TPLLDKIKFPQDLRQLEADQLQQVADELRTELIDAVSVTGGHLGAGLGVVELTVAIHYLF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR  I TLR+  G+SG+T RSESEYDPF AGH   S+
Sbjct: 67  DTPHDRVIWDVGHQAYPHKILTGRRDRIRTLRQPGGLSGFTKRSESEYDPFGAGHSSTSI 126

Query: 199 SAGLGMAVARDIKGKR--ECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSL 256
           SAGLGMAVA D+KG+     ++ VI +G+  AG AYEAM+NAG +D+ +I+ILND+  S+
Sbjct: 127 SAGLGMAVASDLKGEDGGRNVIAVIGDGSMSAGMAYEAMNNAGAMDARLIIILNDNDMSI 186

Query: 257 HPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGM 316
            P +         ALS+ L+R+ SS++F ++R++AK M +R+ +     AA+ +E+ R +
Sbjct: 187 APPV--------GALSNYLARMHSSETFLKVRDIAKNMAQRLPKIWERRAARAEEFTRHL 238

Query: 317 IGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQ 376
               G +LFEELG+YY+GP+DGH+++ L+ VL+ V      GPVL+H VT++ +  E  +
Sbjct: 239 F--TGGSLFEELGIYYVGPIDGHDLDILLPVLRNVRDSAHKGPVLIHCVTQKGKGYEPAE 296

Query: 377 KSEAIEKQQEGASDSNSLPFGN-----YSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMD 431
           K+     +  G +  N +          + +Y   F ++L+ EA KD  IV + A M   
Sbjct: 297 KAP---DKYHGVTKFNVITGAQDKVKASAPSYTKVFAQSLLDEARKDDTIVAISAAMPGG 353

Query: 432 LSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQ 491
             L LF+ +FPER FDVG+AEQHAVTF+AG+A  G+KPFC I S FLQR YDQ+++DV  
Sbjct: 354 TGLDLFESEFPERTFDVGIAEQHAVTFAAGMATEGMKPFCAIYSTFLQRGYDQLIHDVSV 413

Query: 492 QRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDD 551
           Q LPVRF +  AGLVG+DG T  G FD+ F+ CLP+ +VMAPSDE EL  MV T  +I+D
Sbjct: 414 QHLPVRFALDRAGLVGADGATHAGTFDLAFLCCLPDFVVMAPSDEAELKHMVTTSVAIND 473

Query: 552 RPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSK 611
           RP   RYPRG     ++P  +G  + +GKG+V+ EG  VA+L  G  +   LKA   L+ 
Sbjct: 474 RPSAIRYPRGEGYGVEMPA-QGSVLPLGKGRVVREGSTVAILSLGTRLHESLKAADKLAA 532

Query: 612 LGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGV 671
           +G+  TVADARF KPLD+ L+R+L ++H  L+TVEEGS GGFGS V  F+A DGLLD G+
Sbjct: 533 MGLSTTVADARFAKPLDLDLIRQLARHHEVLVTVEEGSCGGFGSQVLEFLARDGLLDHGL 592

Query: 672 KWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
           K RP+ LPD YI+H  P      AGL    I    ++ LG
Sbjct: 593 KVRPLTLPDTYIDHGKPEAMYEAAGLNASGIVGAVVAALG 632


>gi|306845065|ref|ZP_07477645.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella inopinata BO1]
 gi|306274480|gb|EFM56275.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella inopinata BO1]
          Length = 643

 Score =  598 bits (1543), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 319/640 (49%), Positives = 411/640 (64%), Gaps = 22/640 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD    P RL++L  ++L QLA E+R+EL   VS T   L + L  VELTVALHHVF
Sbjct: 6   TPLLDKAPTPDRLRALPEQDLPQLAEELRTELIDAVSTTGGHLGAGLGVVELTVALHHVF 65

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+I+WDVG Q Y HKILTGRR  I TLR+  G+SG+T R+ESEYDPF A H   S+
Sbjct: 66  NTPYDRIIWDVGHQAYPHKILTGRRDRIRTLRQAGGLSGFTKRAESEYDPFGAAHSSTSI 125

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVA ++ G++  ++ VI +G+  AG AYEAM+NAG LD+ +IVILND+  S+ P
Sbjct: 126 SAGLGMAVASELSGEKRNVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAP 185

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S+ L+R+ S +++R +RE AK + +++ + + + A K +EYAR    
Sbjct: 186 --------PTGAMSAYLARLVSGRTYRSVREAAKQVAQKLPKFLQDKARKSEEYARAFF- 236

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G TLFEELG YY+GP+DGHN++ L+ VL+ V      GPVL+HVVT++ +       +
Sbjct: 237 -TGGTLFEELGFYYVGPIDGHNLDHLLPVLKNVRDT-QKGPVLIHVVTQKGK---GYAPA 291

Query: 379 EAIEKQQEGASDSNSL------PFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
           EA   +  G +  + +      P  N + +Y   F  +L+ EA  D  IV V A M    
Sbjct: 292 EAAADKYHGVNKFDVITGKQAKPPAN-APSYTKIFGTSLIEEARHDDKIVAVTAAMPTGT 350

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            L LF E FP+R FDVG+AEQHAVTF+AGLA  G KPFC I S FLQR YDQVV+DV  Q
Sbjct: 351 GLDLFGEAFPKRVFDVGIAEQHAVTFAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQ 410

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
            LPVRF I  AGLVG+DGPT  G+FD  F++ LP  +VMA SDE EL  MV T A  D+ 
Sbjct: 411 NLPVRFPIDRAGLVGADGPTHAGSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEG 470

Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
           P+ FRYPRG  V  DLP  RG  +EIGKG+++ EG  VALL +G  +Q CL A   L   
Sbjct: 471 PISFRYPRGDGVGVDLP-ERGSVLEIGKGRIVREGTKVALLSFGTRLQECLAAAEELGAA 529

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 672
           G+  TVADARF KPLD  L+R L + H  L+ VEEG++GGFGSHV  F+A DGLLD G+K
Sbjct: 530 GLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFGSHVLQFLATDGLLDRGLK 589

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
            R + LPD Y +H  P    A AGL    I  T  + L R
Sbjct: 590 VRALTLPDIYQDHGKPDAMYAEAGLDRTGIVRTVFAALHR 629


>gi|23501337|ref|NP_697464.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella suis 1330]
 gi|161618408|ref|YP_001592295.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella canis ATCC 23365]
 gi|261754435|ref|ZP_05998144.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella suis bv. 3 str.
           686]
 gi|376274806|ref|YP_005115245.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella canis HSK A52141]
 gi|376280126|ref|YP_005154132.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella suis VBI22]
 gi|384224120|ref|YP_005615284.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella suis 1330]
 gi|30315829|sp|Q8G292.1|DXS_BRUSU RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|189027768|sp|A9M8W0.1|DXS_BRUC2 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|23347228|gb|AAN29379.1| deoxyxylulose-5-phosphate synthase [Brucella suis 1330]
 gi|161335219|gb|ABX61524.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella canis ATCC 23365]
 gi|261744188|gb|EEY32114.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella suis bv. 3 str.
           686]
 gi|343382300|gb|AEM17792.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella suis 1330]
 gi|358257725|gb|AEU05460.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella suis VBI22]
 gi|363403373|gb|AEW13668.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella canis HSK A52141]
          Length = 643

 Score =  598 bits (1543), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 319/640 (49%), Positives = 410/640 (64%), Gaps = 22/640 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD    P RL++L  ++L QLA E+R+EL   VS T   L + L  VELTVALHHVF
Sbjct: 6   TPLLDKAPTPDRLRALPEQDLPQLAEELRTELIDAVSTTGGHLGAGLGVVELTVALHHVF 65

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+I+WDVG Q Y HKILTGRR  I TLR+  G+SG+T R+ESEYDPF A H   S+
Sbjct: 66  NTPYDRIIWDVGHQAYPHKILTGRRDRIRTLRQAGGLSGFTKRAESEYDPFGAAHSSTSI 125

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVA ++ G++  ++ VI +G+  AG AYEAM+NAG LD+ +IVILND+  S+ P
Sbjct: 126 SAGLGMAVASELSGEKRNVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAP 185

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S+ L+R+ S +++R +RE AK + +++ + + + A K +EYAR    
Sbjct: 186 --------PTGAMSAYLARLVSGRTYRSVREAAKQVAQKLPKFLQDKARKSEEYARAFF- 236

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G TLFEELG YY+GP+DGHN++ L+ VL+ V      GPVL+HVVT++ +       +
Sbjct: 237 -TGGTLFEELGFYYVGPIDGHNLDHLLPVLKNVRDT-QKGPVLIHVVTQKGK---GYAPA 291

Query: 379 EAIEKQQEGASDSNSL------PFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
           EA   +  G +  + +      P  N   +Y   F  +L+ EA  D  IV V A M    
Sbjct: 292 EAAADKYHGVNKFDVITGKQAKPPANVP-SYTKIFGTSLIEEARHDDKIVAVTAAMPTGT 350

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            L LF E FP+R FDVG+AEQHAVTF+AGLA  G KPFC I S FLQR YDQVV+DV  Q
Sbjct: 351 GLDLFGEAFPKRVFDVGIAEQHAVTFAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQ 410

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
            LPVRF I  AGLVG+DGPT  G+FD  F++ LP  +VMA SDE EL  MV T A  D+ 
Sbjct: 411 NLPVRFPIDRAGLVGADGPTHAGSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEG 470

Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
           P+ FRYPRG  V  DLP  RG  +EIGKG+++ EG  VALL +G  +Q CL A   L   
Sbjct: 471 PISFRYPRGDGVGVDLP-ERGSVLEIGKGRIVREGTKVALLSFGTRLQECLAAAEELGAA 529

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 672
           G+  TVADARF KPLD  L+R L + H  L+ VEEG++GGFGSHV  F+A DGLLD G+K
Sbjct: 530 GLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFGSHVLQFLATDGLLDRGLK 589

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
            R + LPD Y +H  P    A AGL    I  T  + L R
Sbjct: 590 VRALTLPDIYQDHGKPDAMYAEAGLDRTGIVRTVFAALHR 629


>gi|265997614|ref|ZP_06110171.1| 1-deoxyxylulose-5-phosphate synthase [Brucella ceti M490/95/1]
 gi|262552082|gb|EEZ08072.1| 1-deoxyxylulose-5-phosphate synthase [Brucella ceti M490/95/1]
          Length = 646

 Score =  598 bits (1543), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 319/640 (49%), Positives = 411/640 (64%), Gaps = 22/640 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD    P RL++L  ++L QLA E+R+EL   VS T   L + L  VELTVALHHVF
Sbjct: 6   TPLLDKAPTPDRLRALPEQDLPQLAEELRTELIDAVSTTGGHLGAGLGVVELTVALHHVF 65

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+I+WDVG Q Y HKILTGRR  I TLR+  G+SG+T R+ESEYDPF A H   S+
Sbjct: 66  NTPYDRIIWDVGHQAYPHKILTGRRDRIRTLRQAGGLSGFTKRAESEYDPFGAAHSSTSI 125

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVA ++ G++  ++ VI +G+  AG AYEAM+NAG LD+ +IVILND+  S+ P
Sbjct: 126 SAGLGMAVASELSGEKRNVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAP 185

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S+ L+R+ S +++R +RE AK + +++ + + + A K +EYAR    
Sbjct: 186 --------PTGAMSAYLARLVSGRTYRSVREAAKQVAQKLPKFLQDKARKSEEYARAFF- 236

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G TLFEELG YY+GP+DGHN++ L+ VL+ V      GPVL+HVVT++ +       +
Sbjct: 237 -TGGTLFEELGFYYVGPIDGHNLDHLLPVLKNVRDT-QKGPVLIHVVTQKGK---GYAPA 291

Query: 379 EAIEKQQEGASDSNSL------PFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
           EA   +  G +  + +      P  N + +Y   F  +L+ EA  D  IV V A M    
Sbjct: 292 EAAADKYHGVNKFDVITGKQAKPPAN-APSYTKIFGTSLIEEARHDDKIVAVTAAMPTGT 350

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            L LF E FP+R FDVG+AEQHAVTF+AGLA  G KPFC I S FLQR YDQVV+DV  Q
Sbjct: 351 GLDLFGEAFPKRVFDVGIAEQHAVTFAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQ 410

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
            LPVRF I  AGLVG+DGPT  G+FD  F++ LP  +VMA SDE EL  MV T A  D+ 
Sbjct: 411 NLPVRFPIDRAGLVGADGPTHAGSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEG 470

Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
           P+ FRYPRG  V  DLP  RG  +EIGKG+++ EG  VALL +G  +Q CL A   L   
Sbjct: 471 PISFRYPRGDGVGVDLP-ERGSVLEIGKGRIVREGTKVALLSFGTRLQECLAAAEELGAA 529

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 672
           G+  TVADARF KPLD  L+R L + H  L+ VEEG++GGFGSHV  F+A DGLLD G+K
Sbjct: 530 GLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFGSHVLQFLATDGLLDRGLK 589

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
            R + LPD Y +H  P    A AGL    I  T  + L R
Sbjct: 590 VRALTLPDIYQDHGKPDAMYAEAGLDRTGIVRTVFAALHR 629


>gi|17987781|ref|NP_540415.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella melitensis bv. 1
           str. 16M]
 gi|225851972|ref|YP_002732205.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella melitensis ATCC
           23457]
 gi|256264520|ref|ZP_05467052.1| 1-deoxyxylulose-5-phosphate synthase [Brucella melitensis bv. 2
           str. 63/9]
 gi|260563510|ref|ZP_05833996.1| 1-deoxyxylulose-5-phosphate synthase [Brucella melitensis bv. 1
           str. 16M]
 gi|384210822|ref|YP_005599904.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella melitensis M5-90]
 gi|384407921|ref|YP_005596542.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella melitensis M28]
 gi|384444538|ref|YP_005603257.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella melitensis NI]
 gi|21263517|sp|Q8YFM2.1|DXS_BRUME RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|254782063|sp|C0RHE3.1|DXS_BRUMB RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|17983505|gb|AAL52679.1| 1-deoxyxylulose-5-phosphate synthase [Brucella melitensis bv. 1
           str. 16M]
 gi|225640337|gb|ACO00251.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella melitensis ATCC
           23457]
 gi|260153526|gb|EEW88618.1| 1-deoxyxylulose-5-phosphate synthase [Brucella melitensis bv. 1
           str. 16M]
 gi|263094853|gb|EEZ18591.1| 1-deoxyxylulose-5-phosphate synthase [Brucella melitensis bv. 2
           str. 63/9]
 gi|326408468|gb|ADZ65533.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella melitensis M28]
 gi|326538185|gb|ADZ86400.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella melitensis M5-90]
 gi|349742534|gb|AEQ08077.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella melitensis NI]
          Length = 643

 Score =  598 bits (1542), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 319/640 (49%), Positives = 410/640 (64%), Gaps = 22/640 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD    P RL++L  ++L QLA E+R+EL   VS T   L + L  VELTVALHHVF
Sbjct: 6   TPLLDKAPTPDRLRALPEQDLPQLAEELRTELIDAVSTTGGHLGAGLGVVELTVALHHVF 65

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+I+WDVG Q Y HKILTGRR  I TLR+  G+SG+T R+ESEYDPF A H   S+
Sbjct: 66  NTPYDRIIWDVGHQAYPHKILTGRRDRIRTLRQAGGLSGFTKRAESEYDPFGAAHSSTSI 125

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVA ++ G++  ++ VI +G+  AG AYEAM+NAG LD+ +IVILND+  S+ P
Sbjct: 126 SAGLGMAVASELSGEKRNVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAP 185

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S+ L+R+ S +++R +RE AK + +++ + + + A K +EYAR    
Sbjct: 186 --------PTGAMSAYLARLVSGRTYRSVREAAKQVAQKLPKFLQDKARKSEEYARAFF- 236

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G TLFEELG YY+GP+DGHN++ L+ VL+ V      GPVL+HVVT++ +       +
Sbjct: 237 -TGGTLFEELGFYYVGPIDGHNLDHLLPVLKNVRDT-QKGPVLIHVVTQKGK---GYAPA 291

Query: 379 EAIEKQQEGASDSNSL------PFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
           EA   +  G +  + +      P  N + +Y   F  +L+ EA  D  IV V A M    
Sbjct: 292 EAAADKYHGVNKFDVITGKQAKPPAN-APSYTKIFGTSLIEEARHDDKIVAVTAAMPTGT 350

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            L LF E FP+R FDVG+AEQHAVTF+AGLA  G KPFC I S FLQR YDQVV+DV  Q
Sbjct: 351 GLDLFGEAFPKRVFDVGIAEQHAVTFAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQ 410

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
            LPVRF I  AGLVG+DGPT  G+FD  F++ LP  +VMA SDE EL  MV T A  D+ 
Sbjct: 411 NLPVRFPIDRAGLVGADGPTHAGSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEG 470

Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
           P+ FRYPRG  V  DLP  RG  +EIGKG+++ EG  VALL +G  +Q CL A   L   
Sbjct: 471 PISFRYPRGDGVGVDLP-ERGSVLEIGKGRIVREGTKVALLSFGTRLQECLAAAEELGAA 529

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 672
           G+  TVADARF KPLD  L+R L + H  L+ VEEG++GGFGSHV  F+A DGLLD G K
Sbjct: 530 GLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFGSHVLQFLATDGLLDRGFK 589

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
            R + LPD Y +H  P    A AGL    I  T  + L R
Sbjct: 590 VRALTLPDIYQDHGKPDAMYAEAGLDRTGIVRTVFAALHR 629


>gi|261213460|ref|ZP_05927741.1| 1-deoxyxylulose-5-phosphate synthase [Brucella abortus bv. 3 str.
           Tulya]
 gi|260915067|gb|EEX81928.1| 1-deoxyxylulose-5-phosphate synthase [Brucella abortus bv. 3 str.
           Tulya]
          Length = 643

 Score =  598 bits (1542), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 319/640 (49%), Positives = 411/640 (64%), Gaps = 22/640 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD    P RL++L  ++L QLA E+R+EL   VS T   L + L  VELTVALHHVF
Sbjct: 6   TPLLDKAPTPDRLRALPEQDLPQLAEELRTELIDAVSTTGGHLGAGLGVVELTVALHHVF 65

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+I+WDVG Q Y HKILTGRR  I TLR+  G+SG+T R+ESEYDPF A H   S+
Sbjct: 66  NTPYDRIIWDVGHQAYPHKILTGRRDRIRTLRQAGGLSGFTKRAESEYDPFGAAHSSTSI 125

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVA ++ G++  ++ VI +G+  AG AYEAM+NAG LD+ +IVILND+  S+ P
Sbjct: 126 SAGLGMAVASELSGEKRNVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAP 185

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S+ L+R+ S +++R +RE AK + +++ + + + A K +EYAR    
Sbjct: 186 --------PTGAMSAYLARLVSGRTYRSVREAAKQVAQKLPKFLQDKARKSEEYARAFF- 236

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G TLFEELG YY+GP+DGHN++ L+ VL+ V      GPVL+HVVT++ +       +
Sbjct: 237 -TGGTLFEELGFYYVGPIDGHNLDHLLPVLKNVRDT-QKGPVLIHVVTQKGK---GYAPA 291

Query: 379 EAIEKQQEGASDSNSL------PFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
           EA   +  G +  + +      P  N + +Y   F  +L+ EA  D  IV V A M    
Sbjct: 292 EAAADKYHGVNKFDVITGKQAKPPAN-APSYTKIFGTSLIEEARHDDKIVAVTAAMPTGT 350

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            L LF E FP+R FDVG+AEQHAVTF+AGLA  G KPFC I S FLQR YDQVV+DV  Q
Sbjct: 351 GLDLFGEAFPKRVFDVGIAEQHAVTFAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQ 410

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
            LPVRF I  AGLVG+DGPT  G+FD  F++ LP  +VMA SDE EL  MV T A  D+ 
Sbjct: 411 NLPVRFPIDRAGLVGADGPTHAGSFDTGFLAALPGFVVMAVSDEAELRHMVRTAAEYDEG 470

Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
           P+ FRYPRG  V  DLP  RG  +EIGKG+++ EG  VALL +G  +Q CL A   L   
Sbjct: 471 PISFRYPRGDGVGVDLP-ERGSVLEIGKGRIVREGTKVALLSFGTRLQECLAAAEELGAA 529

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 672
           G+  TVADARF KPLD  L+R L + H  L+ VEEG++GGFGSHV  F+A DGLLD G+K
Sbjct: 530 GLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFGSHVLQFLATDGLLDRGLK 589

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
            R + LPD Y +H  P    A AGL    I  T  + L R
Sbjct: 590 VRALTLPDIYQDHGKPDAMYAEAGLDRTGIVRTVFAALHR 629


>gi|260566959|ref|ZP_05837429.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella suis bv. 4 str.
           40]
 gi|260156477|gb|EEW91557.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella suis bv. 4 str.
           40]
          Length = 643

 Score =  598 bits (1541), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 319/640 (49%), Positives = 409/640 (63%), Gaps = 22/640 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD    P RL++L  + L QLA E+R+EL   VS T   L + L  VELTVALHHVF
Sbjct: 6   TPLLDKAPTPDRLRALPEQNLPQLAEELRTELIDAVSTTGGHLGAGLGVVELTVALHHVF 65

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+I+WDVG Q Y HKILTGRR  I TLR+  G+SG+T R+ESEYDPF A H   S+
Sbjct: 66  NTPYDRIIWDVGHQAYPHKILTGRRDRIRTLRQAGGLSGFTKRAESEYDPFGAAHSSTSI 125

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVA ++ G++  ++ VI +G+  AG AYEAM+NAG LD+ +IVILND+  S+ P
Sbjct: 126 SAGLGMAVASELSGEKRNVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAP 185

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S+ L+R+ S +++R +RE AK + +++ + + + A K +EYAR    
Sbjct: 186 --------PTGAMSAYLARLVSGRTYRSVREAAKQVAQKLPKFLQDKARKSEEYARAFF- 236

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G TLFEELG YY+GP+DGHN++ L+ VL+ V      GPVL+HVVT++ +       +
Sbjct: 237 -TGGTLFEELGFYYVGPIDGHNLDHLLPVLKNVRDT-QKGPVLIHVVTQKGK---GYAPA 291

Query: 379 EAIEKQQEGASDSNSL------PFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
           EA   +  G +  + +      P  N   +Y   F  +L+ EA  D  IV V A M    
Sbjct: 292 EAAADKYHGVNKFDVITGKQAKPPANVP-SYTKIFGTSLIEEARHDDKIVAVTAAMPTGT 350

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            L LF E FP+R FDVG+AEQHAVTF+AGLA  G KPFC I S FLQR YDQVV+DV  Q
Sbjct: 351 GLDLFGEAFPKRVFDVGIAEQHAVTFAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQ 410

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
            LPVRF I  AGLVG+DGPT  G+FD  F++ LP  +VMA SDE EL  MV T A  D+ 
Sbjct: 411 NLPVRFPIDRAGLVGADGPTHAGSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEG 470

Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
           P+ FRYPRG  V  DLP  RG  +EIGKG+++ EG  VALL +G  +Q CL A   L   
Sbjct: 471 PISFRYPRGDGVGVDLP-ERGSVLEIGKGRIVREGTKVALLSFGTRLQECLAAAEELGAA 529

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 672
           G+  TVADARF KPLD  L+R L + H  L+ VEEG++GGFGSHV  F+A DGLLD G+K
Sbjct: 530 GLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFGSHVLQFLATDGLLDRGLK 589

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
            R + LPD Y +H  P    A AGL    I  T  + L R
Sbjct: 590 VRALTLPDIYQDHGKPDAMYAEAGLDRTGIVRTVFAALHR 629


>gi|118589273|ref|ZP_01546679.1| 1-deoxy-D-xylulose-5-phosphate synthase [Stappia aggregata IAM
           12614]
 gi|118437973|gb|EAV44608.1| 1-deoxy-D-xylulose-5-phosphate synthase [Labrenzia aggregata IAM
           12614]
          Length = 639

 Score =  598 bits (1541), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 313/639 (48%), Positives = 410/639 (64%), Gaps = 16/639 (2%)

Query: 76  KEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALH 135
           K  TP+LD V++P  L+ L   +LKQLA E+R+E    VS T   L + L  VELTVALH
Sbjct: 4   KPDTPLLDQVKSPADLRQLDESDLKQLADELRAETIDAVSITGGHLGAGLGVVELTVALH 63

Query: 136 HVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGC 195
           +VF+ P DK++WDVG Q Y HKILT RR  I TLR+ DG+SG+T R+ES +DPF A H  
Sbjct: 64  YVFNTPDDKLIWDVGHQCYPHKILTERRDRIRTLRQGDGLSGFTKRAESPFDPFGAAHSS 123

Query: 196 NSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHS 255
            S+SAGLGMA  RD+KG    ++ VI +G   AG AYEAM+NAG+L S +IVILND+  S
Sbjct: 124 TSISAGLGMAAGRDLKGGSNNVIAVIGDGAMSAGMAYEAMNNAGHLGSRLIVILNDNDMS 183

Query: 256 LHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARG 315
           + P         + A+S+ L+++ S  +++  R+ AK + K + + + E AA+ +EYARG
Sbjct: 184 IAP--------PVGAMSAYLAKLVSGPTYQTFRDAAKNLVKNLPKPVFEKAARAEEYARG 235

Query: 316 MIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRR---A 372
                G TLFEELG YY+GPVDGHN+E L+ VL+ V      GP+L+H VT++ +    A
Sbjct: 236 FW--TGGTLFEELGFYYVGPVDGHNLEHLLPVLKNVRDT-HHGPILIHAVTQKGKGYAPA 292

Query: 373 EDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
           E  +       + +  +   + P  N + +Y + F  +L+ EAE D  ++ + A M    
Sbjct: 293 EGAKDKYHGVAKFDVVTGKQAKPKAN-APSYTNVFATSLIKEAETDDRVLAITAAMPDGT 351

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            L LF E +P+R FDVG+AEQHAVTF+AGLA  G KPFC I S FLQRAYDQVV+DV  Q
Sbjct: 352 GLDLFGEAYPKRTFDVGIAEQHAVTFAAGLATEGFKPFCAIYSTFLQRAYDQVVHDVAIQ 411

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
            LPVRF I  AGLVG+DGPT  GAFD  F++CLP  +VMA SDE EL  MVAT  + D+ 
Sbjct: 412 GLPVRFPIDRAGLVGADGPTHAGAFDTAFLTCLPGFVVMAASDEVELRHMVATAVAYDEG 471

Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
           P+ FRYPRG  V  D+P  RG  +EIGKG +  EG  VALL +G  +  CLKA   L   
Sbjct: 472 PISFRYPRGEGVGLDMP-ERGSVLEIGKGVIRREGTKVALLNFGGRMSECLKAADELDAA 530

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 672
           G+  TVADARF KPLD+ ++R L + H  L+ +EEGS GGFGSHV   +A +GLLD+G+K
Sbjct: 531 GLSTTVADARFAKPLDMDMIRRLAREHEVLVMIEEGSAGGFGSHVLTRLAEEGLLDNGLK 590

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
            R + LPD Y++H  P    A AGL    I  T  + LG
Sbjct: 591 VRALALPDAYLDHDKPDAMYARAGLNSDGILKTVFTALG 629


>gi|209886012|ref|YP_002289869.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oligotropha
           carboxidovorans OM5]
 gi|337740417|ref|YP_004632145.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oligotropha
           carboxidovorans OM5]
 gi|386029434|ref|YP_005950209.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oligotropha
           carboxidovorans OM4]
 gi|209874208|gb|ACI94004.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oligotropha
           carboxidovorans OM5]
 gi|336094502|gb|AEI02328.1| 1-deoxy-D-xylulose-5-phosphate synthase Dxs [Oligotropha
           carboxidovorans OM4]
 gi|336098081|gb|AEI05904.1| 1-deoxy-D-xylulose-5-phosphate synthase Dxs [Oligotropha
           carboxidovorans OM5]
          Length = 636

 Score =  598 bits (1541), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 311/644 (48%), Positives = 415/644 (64%), Gaps = 32/644 (4%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V  P +L++L+ ++L QLA E+R E+   VS T   L + L  VELTVALH+VF
Sbjct: 5   TPLLDSVPTPDKLRALSPEQLPQLADELRREMVDAVSVTGGHLGAGLGVVELTVALHYVF 64

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+I+WDVG Q Y HKILTGRR  I TLR+  G+SG+  R+ESEYD F   H   S+
Sbjct: 65  NTPADRIIWDVGHQAYPHKILTGRRDRIRTLRQGGGLSGFPKRAESEYDAFGTAHSSTSI 124

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVARD++G    ++ VI +G+  AG AYEAM+NAG L+S +IVILND+  S+ P
Sbjct: 125 SAGLGMAVARDLQGGNNNVIAVIGDGSMSAGMAYEAMNNAGALNSRLIVILNDNDMSIAP 184

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                    + A+S+ L+R+ SS+++   RE+ K + +R+ +  H+   + +EYARGM+ 
Sbjct: 185 --------PVGAMSAYLARLISSQTYGTAREILKTIAQRMPKFFHDRTLRAEEYARGMV- 235

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G  LFEELGL+Y+GP+DGHN++ L+ VL  V   G+ GPVL+HVVT++ +     ++S
Sbjct: 236 -AGGMLFEELGLFYVGPIDGHNLDHLLPVLTNVRDSGT-GPVLIHVVTKKGKGYAPAEES 293

Query: 379 E-----------AIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAG 427
           +           A  KQ +  S++ S         Y   F  +LV EA+KD  IV +   
Sbjct: 294 DDRYHGVVKFDVATGKQFKAKSNTPS---------YTSVFGNSLVKEAQKDDKIVAITGA 344

Query: 428 MEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVN 487
           M     + +F + FP+R FDVG+AEQHAVTF+AGLA  G KPFC + S FLQR YDQVV+
Sbjct: 345 MPGGTGIDIFGKAFPDRTFDVGIAEQHAVTFAAGLAAEGYKPFCALYSTFLQRGYDQVVH 404

Query: 488 DVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVA 547
           DV  Q LPVRF I  AGLVG+DGPT  G+FD T++ CLPN I+MA  DE +LV M+AT  
Sbjct: 405 DVAIQNLPVRFAIDRAGLVGADGPTHAGSFDNTYLGCLPNFIIMAAGDEADLVHMIATQT 464

Query: 548 SIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARA 607
            ID+ P   RYPRG  +  +LP   G+P+EIGKG+VL EG  VAL  +G  +  CLKA  
Sbjct: 465 GIDNAPSALRYPRGEGLGVELPDV-GVPLEIGKGRVLREGSKVALFSFGTRLGECLKAAD 523

Query: 608 LLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLL 667
            L   G+  TVADARF KPLD  L+ +L ++H  LIT+EEGS+GGFG+HV   +A  G L
Sbjct: 524 DLESRGLSTTVADARFLKPLDTDLLLKLARSHEVLITIEEGSVGGFGTHVIQALADHGAL 583

Query: 668 DSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
           D G+K R +VLPD +I+  SP +    AGL    I A  L  LG
Sbjct: 584 DKGLKIRSMVLPDIFIDQDSPAKMYEQAGLDAKAIVAKVLETLG 627


>gi|265994395|ref|ZP_06106952.1| 1-deoxyxylulose-5-phosphate synthase [Brucella melitensis bv. 3
           str. Ether]
 gi|262765508|gb|EEZ11297.1| 1-deoxyxylulose-5-phosphate synthase [Brucella melitensis bv. 3
           str. Ether]
          Length = 643

 Score =  597 bits (1539), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 318/640 (49%), Positives = 411/640 (64%), Gaps = 22/640 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD    P RL++L  ++L QLA E+R+EL   VS T   L + L  VELTVALHHVF
Sbjct: 6   TPLLDKAPTPDRLRALPEQDLPQLAEELRTELIDAVSTTGGHLGAGLGVVELTVALHHVF 65

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+I+WDVG Q Y HKILTGRR  I TLR+  G+SG+T R+ESEYDPF A H   S+
Sbjct: 66  NTPYDRIIWDVGHQAYPHKILTGRRDRIRTLRQAGGLSGFTKRAESEYDPFGAAHSSTSI 125

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVA ++ G++  ++ VI +G+  AG AYEAM+NAG LD+ +IVILND+  S+ P
Sbjct: 126 SAGLGMAVASELSGEKRNVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAP 185

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S+ L+R+ S +++R +RE AK + +++ + + + A K +EYAR    
Sbjct: 186 --------PTGAMSAYLARLVSGRTYRSVREAAKQVAQKLPKFLQDKARKSEEYARAFF- 236

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G TLFEELG YY+GP+DGHN++ L+ VL+ V      GPVL+HVVT++ +       +
Sbjct: 237 -TGGTLFEELGFYYVGPIDGHNLDHLLPVLKNVRDT-QKGPVLIHVVTQKGK---GYAPA 291

Query: 379 EAIEKQQEGASDSNSL------PFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
           EA   +  G +  + +      P  N + +Y   F  +L+ EA  D  IV V A M    
Sbjct: 292 EAAADKYHGVNKFDVITGKQAKPPAN-APSYTKIFGTSLIEEARHDDKIVAVTAAMPTGT 350

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            L LF E FP+R FDVG+AEQHAVTF+AGLA  G KPFC I S FLQR YDQVV+DV  Q
Sbjct: 351 GLDLFGEAFPKRVFDVGIAEQHAVTFAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQ 410

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
            LPVRF I  AGLVG+DGPT  G+FD  F++ LP  +VMA S+E EL  MV T A  D+ 
Sbjct: 411 NLPVRFPIDRAGLVGADGPTHAGSFDTGFLAALPGFVVMAASNEAELRHMVRTAAEYDEG 470

Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
           P+ FRYPRG  V  DLP  RG  +EIGKG+++ EG  VALL +G  +Q CL A   L   
Sbjct: 471 PISFRYPRGDGVGVDLP-ERGSVLEIGKGRIVREGTKVALLSFGTRLQECLAAAEELGAA 529

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 672
           G+  TVADARF KPLD  L+R L + H  L+ VEEG++GGFGSHV  F+A DGLLD G+K
Sbjct: 530 GLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFGSHVLQFLATDGLLDRGLK 589

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
            R + LPD Y +H  P    A AGL    I  T  + L R
Sbjct: 590 VRALTLPDIYQDHGKPDAMYAEAGLDRTGIVRTVFAALHR 629


>gi|367474105|ref|ZP_09473631.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein
           [Bradyrhizobium sp. ORS 285]
 gi|365273603|emb|CCD86099.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein
           [Bradyrhizobium sp. ORS 285]
          Length = 641

 Score =  597 bits (1539), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 302/639 (47%), Positives = 417/639 (65%), Gaps = 19/639 (2%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD ++ P  L+ L +++++Q+A E+R E    VS T     + L  VELT A+H+VF
Sbjct: 7   TPLLDTIKTPEDLRRLKVEQVRQVADELRQETIDAVSVTGGHFGAGLGVVELTTAIHYVF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR  I TLR   G+SG+T R+ES+YDPF A H   S+
Sbjct: 67  DTPRDRLIWDVGHQAYPHKILTGRRDRIRTLRTGGGLSGFTKRTESDYDPFGAAHSSTSI 126

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVARD+ G +  ++ VI +G   AG AYEAM+NAG ++S +IVILND+  S+ P
Sbjct: 127 SAGLGMAVARDLSGGKNNVIAVIGDGAMSAGMAYEAMNNAGAMNSRLIVILNDNDMSIAP 186

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                    + A+S+ LSR+ S K++R LR+ AK + + + + +   A++V+EY+RG + 
Sbjct: 187 --------PVGAMSAYLSRLYSGKTYRTLRDAAKQLGQHLPKVIANRASRVEEYSRGFM- 237

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQ-- 376
             G TLFEELG YY+GP+DGHN++ L+ VL+ V  +   GP+LVHVVT++ +     +  
Sbjct: 238 MDGGTLFEELGFYYVGPIDGHNLDHLLPVLKNVRDM-ETGPILVHVVTQKGKGYSPAEAA 296

Query: 377 --KSEAIEKQQ-EGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
             K  A+ K      + + + P    +  Y + F ++LV EAEKD  IV + A M     
Sbjct: 297 ADKYHAVAKFDIATGTQAKAKP---NAPAYQNVFGQSLVKEAEKDDKIVGITAAMPSGTG 353

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           + +F + FP+R FDVG+AEQHAVTF+AGLA  G KPFC I S FLQR YDQ+V+DV  Q 
Sbjct: 354 IDIFAKAFPKRTFDVGIAEQHAVTFAAGLASEGYKPFCAIYSTFLQRGYDQIVHDVAIQS 413

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPVRF I  AGLVG+DG T  G+FD  ++ CLPNM++MA SDE ELV MVAT  +IDD+P
Sbjct: 414 LPVRFAIDRAGLVGADGATHAGSFDNAYLGCLPNMVIMAASDEAELVHMVATQVAIDDKP 473

Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
              RYPRG     ++P   G+P+ IGKG+++ +GK +ALL +G  +  C KA   L+  G
Sbjct: 474 SAVRYPRGEGRGVEMPEV-GVPLPIGKGRMIRQGKQIALLSFGTRLAECEKAADELAAHG 532

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKW 673
           +  ++ADARF KPLD +L+ +L + H  LIT+EEGSIGGFGSHV  F+A  G+LD G+K 
Sbjct: 533 LSASIADARFMKPLDEELIMKLAREHDILITIEEGSIGGFGSHVMQFLADQGMLDGGLKM 592

Query: 674 RPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
           R +VLPD + +H +P    A AGL    I       LG+
Sbjct: 593 RSMVLPDEFQDHDTPAAMYARAGLDAKGIVRKVFEALGK 631


>gi|261324565|ref|ZP_05963762.1| 1-deoxyxylulose-5-phosphate synthase [Brucella neotomae 5K33]
 gi|261300545|gb|EEY04042.1| 1-deoxyxylulose-5-phosphate synthase [Brucella neotomae 5K33]
          Length = 643

 Score =  597 bits (1538), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 318/640 (49%), Positives = 410/640 (64%), Gaps = 22/640 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD    P RL++L  ++L QLA E+R+EL   VS T   L + L  VELTVALHHVF
Sbjct: 6   TPLLDKAPTPDRLRALPEQDLPQLAEELRTELIDAVSTTGGHLGAGLGVVELTVALHHVF 65

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+I+WDVG Q Y HKILTGRR  I TLR+  G+SG+T R+ESEYDPF A H   S+
Sbjct: 66  NTPYDRIIWDVGHQAYPHKILTGRRDRIRTLRQAGGLSGFTKRAESEYDPFGAAHSSTSI 125

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVA ++ G++  ++ VI +G+  AG AYEAM+NAG LD+ +IVILND+  S+ P
Sbjct: 126 SAGLGMAVASELSGEKRNVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAP 185

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S+ L+R+ S +++R +RE AK + +++ + + + A K +EYAR    
Sbjct: 186 --------PTGAMSAYLARLVSGRTYRSVREAAKQVAQKLPKFLQDKARKSEEYARAFF- 236

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G TLFEELG YY+GP+DGHN++ L+ VL+ V      GPVL+HVVT++ +       +
Sbjct: 237 -TGGTLFEELGFYYVGPIDGHNLDHLLPVLKNVRDT-QKGPVLIHVVTQKGK---GYAPA 291

Query: 379 EAIEKQQEGASDSNSL------PFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
           EA   +  G +  + +      P  N + +Y   F  +L+ EA  D  IV V A M    
Sbjct: 292 EAAADKYHGVNKFDVITGKQAKPPAN-APSYTKIFGTSLIEEARHDDKIVAVTAAMPTGT 350

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            L LF E FP+R FDVG+AEQHAVTF+AGLA  G KPFC I S FLQR YDQVV+DV  Q
Sbjct: 351 GLDLFGEAFPKRVFDVGIAEQHAVTFAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQ 410

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
            LPVRF I  AGLVG+DGPT  G+FD  F++ LP  +VMA SDE EL  MV T A  D+ 
Sbjct: 411 NLPVRFPIDRAGLVGADGPTHAGSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEG 470

Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
           P+ FRYPRG  V  DLP  RG  +EIGKG+++ EG  VALL +G  +Q CL A   L   
Sbjct: 471 PISFRYPRGDGVGVDLP-ERGSVLEIGKGRIVREGTKVALLSFGTRLQECLAAAEELGAA 529

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 672
           G+  TVADARF KPLD  L+R L + H  L+ VEEG++GGFGSHV  F+A DGLLD G+K
Sbjct: 530 GLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFGSHVLQFLATDGLLDRGLK 589

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
            R + LPD Y +H  P    A AGL    I     + L R
Sbjct: 590 VRALTLPDIYQDHGKPDAMYAEAGLDRTGIVRAVFAALHR 629


>gi|265990565|ref|ZP_06103122.1| 1-deoxyxylulose-5-phosphate synthase [Brucella melitensis bv. 1
           str. Rev.1]
 gi|263001349|gb|EEZ13924.1| 1-deoxyxylulose-5-phosphate synthase [Brucella melitensis bv. 1
           str. Rev.1]
          Length = 643

 Score =  597 bits (1538), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 318/640 (49%), Positives = 410/640 (64%), Gaps = 22/640 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD    P RL++L  ++L QLA E+R+EL   VS T   L + L  VELTVALHHVF
Sbjct: 6   TPLLDKAPTPDRLRALPEQDLPQLAEELRTELIDAVSTTGGHLGAGLGVVELTVALHHVF 65

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+I+WDVG Q Y HKILTGRR  I TLR+  G+SG+T R+ESEYDPF A H   S+
Sbjct: 66  NTPYDRIIWDVGHQAYPHKILTGRRDRIRTLRQAGGLSGFTKRAESEYDPFGAAHSSTSI 125

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVA ++ G++  ++ VI +G+  AG AYEAM+NAG LD+ +IVILND+  S+ P
Sbjct: 126 SAGLGMAVASELSGEKRNVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAP 185

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S+ L+R+ S +++R +RE AK + +++ + + + A K +EYAR    
Sbjct: 186 --------PTGAMSAYLARLVSGRTYRSVREAAKQVAQKLPKFLQDKARKSEEYARAFF- 236

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G TLFEELG YY+GP+DGHN++ L+ VL+ V      GPVL+HVVT++ +       +
Sbjct: 237 -TGGTLFEELGFYYVGPIDGHNLDHLLPVLKNVRDT-QKGPVLIHVVTQKGK---GYAPA 291

Query: 379 EAIEKQQEGASDSNSL------PFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
           EA   +  G +  + +      P  N + +Y   F  +L+ EA  +  IV V A M    
Sbjct: 292 EAAADKYHGVNKFDVITGKQAKPPAN-APSYTKIFGTSLIEEARHNDKIVAVTAAMPTGT 350

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            L LF E FP+R FDVG+AEQHAVTF+AGLA  G KPFC I S FLQR YDQVV+DV  Q
Sbjct: 351 GLDLFGEAFPKRVFDVGIAEQHAVTFAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQ 410

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
            LPVRF I  AGLVG+DGPT  G+FD  F++ LP  +VMA SDE EL  MV T A  D+ 
Sbjct: 411 NLPVRFPIDRAGLVGADGPTHAGSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEG 470

Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
           P+ FRYPRG  V  DLP  RG  +EIGKG+++ EG  VALL +G  +Q CL A   L   
Sbjct: 471 PISFRYPRGDGVGVDLP-ERGSVLEIGKGRIVREGTKVALLSFGTRLQECLAAAEELGAA 529

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 672
           G+  TVADARF KPLD  L+R L + H  L+ VEEG++GGFGSHV  F+A DGLLD G K
Sbjct: 530 GLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFGSHVLQFLATDGLLDRGFK 589

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
            R + LPD Y +H  P    A AGL    I  T  + L R
Sbjct: 590 VRALTLPDIYQDHGKPDAMYAEAGLDRTGIVRTVFAALHR 629


>gi|418055612|ref|ZP_12693666.1| 1-deoxy-D-xylulose-5-phosphate synthase [Hyphomicrobium
           denitrificans 1NES1]
 gi|353209890|gb|EHB75292.1| 1-deoxy-D-xylulose-5-phosphate synthase [Hyphomicrobium
           denitrificans 1NES1]
          Length = 635

 Score =  597 bits (1538), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 309/641 (48%), Positives = 409/641 (63%), Gaps = 22/641 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD +  P  L+ L+  +L Q+A E+R+E+   VS T   L + L  +ELTVALH VF
Sbjct: 4   TPLLDRIGTPHELRQLSEDQLPQVADELRAEMIDAVSVTGGHLGAGLGVIELTVALHWVF 63

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+++WDVG Q Y HKILTGRR  I TLR+  G+SG+T R ES YDPF A H   S+
Sbjct: 64  NTPEDRLIWDVGHQAYPHKILTGRRDRIRTLRQPGGLSGFTKRDESPYDPFGAAHSSTSI 123

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LGMAVARD+ G +  ++ VI +G   AG AYEA++NAG  D  +IVILND+  S+ P
Sbjct: 124 SAALGMAVARDLNGGKNSVIAVIGDGAMSAGMAYEALNNAGARDERLIVILNDNDMSIAP 183

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      ALS+ L+R+ SS ++  LR+ AK + K + +     AA+V+EY R +  
Sbjct: 184 --------PTGALSAYLARVTSSGTYLHLRDYAKQLAKMLPKQWERRAARVEEYTRHIW- 234

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
            QG T FEELG YY+GP+DGH+   L+ VL+ V       P+LVHVVT   ++ +    +
Sbjct: 235 -QGGTWFEELGFYYVGPIDGHDFNQLLPVLKNVRD-AEQAPILVHVVT---KKGKGYAPA 289

Query: 379 EAIEKQQEGASDSNSL------PFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
           EA + +  G +  N +      P  N + +Y   F ++L+ EA KDK IV + A M    
Sbjct: 290 EAADDKYHGVNKFNVITGAQVKPKPN-APSYTKVFADSLIDEARKDKRIVAITAAMPSGT 348

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            L  F ++FP+R FDVG+AEQHAVTF+AGLA  G KPF  I S FLQRAYDQVV+DV  Q
Sbjct: 349 GLDHFGKEFPDRTFDVGIAEQHAVTFAAGLAAEGYKPFAAIYSTFLQRAYDQVVHDVAIQ 408

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
           +LPVRF +  AGLVG+DG T  G+FDI ++ CLP+ ++MA SDE ELV MVAT   IDDR
Sbjct: 409 KLPVRFALDRAGLVGADGATHAGSFDIAYLGCLPDFVIMAASDEAELVHMVATQVQIDDR 468

Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
           P   RYPRG  +  D+P + G+P+EIGKG+++ EG  +ALL  G  +  CLKA   L   
Sbjct: 469 PSALRYPRGEGIGVDMPEF-GVPLEIGKGRIVREGSKIALLSLGTRLAECLKAADQLQTF 527

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 672
           G+  TVADARF KPLD +L+R+L  NH  L+TVEEGS+GGFGSHV  F++ +GLLD G++
Sbjct: 528 GLSTTVADARFAKPLDGRLIRDLALNHEVLVTVEEGSVGGFGSHVLQFLSNEGLLDRGLR 587

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRT 713
            R  VLPD +I+   P      AGL    I  T  + LGR 
Sbjct: 588 VRAKVLPDVFIDQGKPEAMYEEAGLNASGIVQTVFAALGRA 628


>gi|261315322|ref|ZP_05954519.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella pinnipedialis
           M163/99/10]
 gi|261304348|gb|EEY07845.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella pinnipedialis
           M163/99/10]
          Length = 643

 Score =  597 bits (1538), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 318/640 (49%), Positives = 411/640 (64%), Gaps = 22/640 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD    P RL++L  ++L QLA E+R+EL   VS T   L + L  VELTVALHHVF
Sbjct: 6   TPLLDKAPTPDRLRALPEQDLPQLAEELRTELIDAVSTTGGHLGAGLGVVELTVALHHVF 65

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+I+WDVG Q Y HKILTGRR  I TLR+  G+SG+T R+ESEYDPF A H   S+
Sbjct: 66  NTPYDRIIWDVGHQAYPHKILTGRRDRIRTLRQAGGLSGFTKRAESEYDPFGAAHSSTSI 125

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVA ++ G++  ++ VI +G+  AG AYEAM+NAG LD+ +IVILND+  S+ P
Sbjct: 126 SAGLGMAVASELSGEKRNVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAP 185

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S+ L+R+ S +++R +RE AK + +++ + + + A K +EYAR    
Sbjct: 186 --------PTGAMSAYLARLVSGRTYRSVREAAKQVAQKLPKFLQDKARKSEEYARAFF- 236

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G TLFEELG YY+GP+DGHN++ L+ VL+ V      GPVL+HVVT++ +       +
Sbjct: 237 -TGGTLFEELGFYYVGPIDGHNLDHLLPVLKNVRDT-QKGPVLIHVVTQKGK---GYAPA 291

Query: 379 EAIEKQQEGASDSNSL------PFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
           EA   +  G ++ + +      P  N + +Y   F  +L+ EA  D  IV V A M    
Sbjct: 292 EAAADKYHGVNEFDVITGKQAKPPAN-APSYTKIFGTSLIEEARHDDKIVAVTAAMPTGT 350

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            L LF E FP+R FDVG+AEQHAVTF+AGLA  G KPFC I S FLQR YDQVV+DV  Q
Sbjct: 351 GLDLFGEAFPKRVFDVGIAEQHAVTFAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQ 410

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
            LPVRF I  AGLVG+DGPT  G+FD  F++ LP  +VMA SDE EL  MV T A  D+ 
Sbjct: 411 NLPVRFPIDRAGLVGADGPTHAGSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEG 470

Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
           P+ FRYPRG  V  DLP  RG  +EIGKG+++ EG  VALL +G  +Q CL A   L   
Sbjct: 471 PISFRYPRGDGVGVDLP-ERGSVLEIGKGRIVREGTKVALLSFGTRLQECLAAAEELGAA 529

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 672
           G+  TVADARF KPLD  L+R L + H  L+ VEEG++GGF SHV  F+A DGLLD G+K
Sbjct: 530 GLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFSSHVLQFLATDGLLDRGLK 589

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
            R + LPD Y +H  P    A AGL    I  T  + L R
Sbjct: 590 VRALTLPDIYQDHGKPDAMYAEAGLDRTGIVRTVFAALHR 629


>gi|323135714|ref|ZP_08070797.1| deoxyxylulose-5-phosphate synthase [Methylocystis sp. ATCC 49242]
 gi|322398805|gb|EFY01324.1| deoxyxylulose-5-phosphate synthase [Methylocystis sp. ATCC 49242]
          Length = 642

 Score =  596 bits (1537), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 322/651 (49%), Positives = 411/651 (63%), Gaps = 25/651 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD +  P  L+ L   +LKQ A E+R E    VS T   L + L  VELTVALH+VF
Sbjct: 6   TPLLDRINTPDELRRLHPSQLKQFADELRRETIDAVSVTGGHLGAGLGVVELTVALHYVF 65

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P DKI+WDVG QTY HKI+TGRR  I TLR   G+SG+T R+ESEYD F AGH   S+
Sbjct: 66  DTPNDKIIWDVGHQTYPHKIITGRRDRIRTLRMGGGLSGFTKRAESEYDAFGAGHSSTSI 125

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVARD+ G    +V VI + +  AG AYEA++NAG LDS +IVILND+  S+ P
Sbjct: 126 SAGLGMAVARDLAGGNNHVVAVIGDSSMSAGMAYEALNNAGALDSRLIVILNDNDMSIAP 185

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S+ L+R+ S  ++R +R+ AK +   + R +++ A K +E++R  I 
Sbjct: 186 --------PTGAMSAYLARLVSGGAYRSIRDAAKQLASHLPRFIYDKARKAEEFSRSFI- 236

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G T+FEELG YY+GP+DGHN++ L+ VL  V      GPVLVHVVT++ +       +
Sbjct: 237 -TGGTMFEELGFYYVGPIDGHNLDHLLPVLMNVRDKDD-GPVLVHVVTQKGK---GYAPA 291

Query: 379 EAIEKQQEGA------SDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
           EA + +  G       +     P  N + +Y   F +ALV EAE D  IV + A M    
Sbjct: 292 EAADDKYHGVVKFDVETGKQFKPKAN-APSYTGVFAKALVAEAEHDDRIVAITAAMPSGT 350

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            L +F + FP+R FDV +AEQHAVTF+AGLAC G KPFC + S FLQR YDQVV+DV  Q
Sbjct: 351 GLDIFGKHFPQRTFDVAIAEQHAVTFAAGLACEGYKPFCALYSTFLQRGYDQVVHDVAIQ 410

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
            LPVRF I  AGLVG+DGPT  GAFDI ++ CLP M+VMAPSDE EL+ MVAT A+ D+ 
Sbjct: 411 HLPVRFAIDRAGLVGADGPTHAGAFDIAYLGCLPGMVVMAPSDEAELMHMVATAAAYDEG 470

Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
           P+ FRYPRG  V  +LP  RG  +EIGKG+VL EG  VAL+  G  +   +KA   L   
Sbjct: 471 PIAFRYPRGEGVGVELP-ERGDVLEIGKGRVLREGTKVALVALGTRLAEAMKAAEELENY 529

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLD---S 669
           G+  TVADARF KP+D  L+R L  NH  +IT+EEGSIGGFGS V   ++ DGLLD    
Sbjct: 530 GVSTTVADARFAKPIDRDLLRRLAANHEVVITLEEGSIGGFGSQVFQALSDDGLLDGARG 589

Query: 670 GVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLLM 720
             K+R + LPD YI+H      +A A L    I A AL LLG  + A  +M
Sbjct: 590 AFKFRSMTLPDAYIDHDKHEIMIARAMLDSKAIVAKALELLGDEKGAARVM 640


>gi|82699348|ref|YP_413922.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella melitensis biovar
           Abortus 2308]
 gi|237814909|ref|ZP_04593907.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus str. 2308
           A]
 gi|118595496|sp|Q2YMF0.1|DXS_BRUA2 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|82615449|emb|CAJ10418.1| Transketolase, N terminal:Transketolase, central
           region:Transketolase, C
           terminal:Deoxyxylulose-5-phosphate synthase [Brucella
           melitensis biovar Abortus 2308]
 gi|237789746|gb|EEP63956.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus str. 2308
           A]
          Length = 643

 Score =  596 bits (1537), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 318/640 (49%), Positives = 411/640 (64%), Gaps = 22/640 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD    P RL++L  ++L QLA E+R+EL   VS T   L + L  VELTVALHHVF
Sbjct: 6   TPLLDKAPTPDRLRALPEQDLPQLAEELRTELIDAVSTTGGHLGAGLGVVELTVALHHVF 65

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+I+WDVG Q Y HKILTGRR  I TLR+  G+SG+T R+ESEYDPF A H   S+
Sbjct: 66  NTPYDRIIWDVGHQAYPHKILTGRRDRIRTLRQAGGLSGFTKRAESEYDPFGAAHSSTSI 125

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVA ++ G++  ++ VI +G+  AG AYEAM+NAG LD+ +IVILND+  S+ P
Sbjct: 126 SAGLGMAVASELSGEKRNVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAP 185

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S+ L+R+ S +++R +RE AK + +++ + + + A K +EYAR    
Sbjct: 186 --------PTGAMSAYLARLVSGRTYRSVREAAKQVAQKLPKFLQDKARKSEEYARAFF- 236

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G TLFEELG YY+GP+DGHN++ L+ VL+ V      GPVL+HVVT++ +       +
Sbjct: 237 -TGGTLFEELGFYYVGPIDGHNLDHLLPVLKNVRDT-QKGPVLIHVVTQKGK---GYAPA 291

Query: 379 EAIEKQQEGASDSNSL------PFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
           EA   +  G +  + +      P  N + +Y   F  +L+ EA  D  IV V A M    
Sbjct: 292 EAAADKYHGVNKFDVITGKQAKPPAN-APSYTKIFGTSLIEEARHDDKIVAVTAAMPTGT 350

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            L LF E FP+R FDVG+AEQHAVTF+AGLA  G KPFC I S FLQR YDQVV+DV  Q
Sbjct: 351 GLDLFGEAFPKRVFDVGIAEQHAVTFAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQ 410

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
            LPVRF I  AGLVG+DGPT  G+FD  F++ LP  +VMA SDE EL  MV T A  D+ 
Sbjct: 411 NLPVRFPIDRAGLVGADGPTHAGSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEG 470

Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
           P+ FRYPRG  V  DLP  RG  +EIGKG+++ EG  VALL +G  +Q CL A   L   
Sbjct: 471 PISFRYPRGDGVGVDLP-ERGSVLEIGKGRIVREGTKVALLSFGTRLQECLAAAEELGAA 529

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 672
           G+  TVADARF KPLD  L+R L + H  L+ VEEG++GGF SHV  F+A DGLLD G+K
Sbjct: 530 GLSTTVADARFAKPLDHDLIRRLVREHEVLVMVEEGAVGGFSSHVLQFLATDGLLDRGLK 589

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
            R ++LPD Y +H  P    A AGL    I  T  + L R
Sbjct: 590 VRALMLPDIYQDHGKPDAMYAEAGLDRTGIVRTVFAALHR 629


>gi|62289421|ref|YP_221214.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 1
           str. 9-941]
 gi|189023672|ref|YP_001934440.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus S19]
 gi|260545827|ref|ZP_05821568.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus NCTC
           8038]
 gi|260761258|ref|ZP_05873601.1| 1-deoxyxylulose-5-phosphate synthase [Brucella abortus bv. 2 str.
           86/8/59]
 gi|376273822|ref|YP_005152400.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus A13334]
 gi|423167409|ref|ZP_17154112.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 1
           str. NI435a]
 gi|423170215|ref|ZP_17156890.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 1
           str. NI474]
 gi|423173705|ref|ZP_17160376.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 1
           str. NI486]
 gi|423177010|ref|ZP_17163656.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 1
           str. NI488]
 gi|423179648|ref|ZP_17166289.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 1
           str. NI010]
 gi|423182778|ref|ZP_17169415.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 1
           str. NI016]
 gi|423186279|ref|ZP_17172893.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 1
           str. NI021]
 gi|423189417|ref|ZP_17176027.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 1
           str. NI259]
 gi|75497245|sp|Q57ET1.1|DXS_BRUAB RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|229813263|sp|B2S9T6.1|DXS_BRUA1 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|62195553|gb|AAX73853.1| Dxs, deoxyxylulose-5-phosphate synthase [Brucella abortus bv. 1
           str. 9-941]
 gi|189019244|gb|ACD71966.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus S19]
 gi|260097234|gb|EEW81109.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus NCTC
           8038]
 gi|260671690|gb|EEX58511.1| 1-deoxyxylulose-5-phosphate synthase [Brucella abortus bv. 2 str.
           86/8/59]
 gi|363401428|gb|AEW18398.1| 1-deoxyxylulose-5-phosphate synthase [Brucella abortus A13334]
 gi|374540843|gb|EHR12342.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 1
           str. NI435a]
 gi|374541451|gb|EHR12946.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 1
           str. NI486]
 gi|374542451|gb|EHR13940.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 1
           str. NI474]
 gi|374551167|gb|EHR22602.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 1
           str. NI010]
 gi|374551624|gb|EHR23058.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 1
           str. NI016]
 gi|374552760|gb|EHR24183.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 1
           str. NI488]
 gi|374557336|gb|EHR28733.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 1
           str. NI259]
 gi|374557958|gb|EHR29352.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 1
           str. NI021]
          Length = 643

 Score =  596 bits (1537), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 318/640 (49%), Positives = 411/640 (64%), Gaps = 22/640 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD    P RL++L  ++L QLA E+R+EL   VS T   L + L  VELTVALHHVF
Sbjct: 6   TPLLDKAPTPDRLRALPEQDLPQLAEELRTELIDAVSTTGGHLGAGLGVVELTVALHHVF 65

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+I+WDVG Q Y HKILTGRR  I TLR+  G+SG+T R+ESEYDPF A H   S+
Sbjct: 66  NTPYDRIIWDVGHQAYPHKILTGRRDRIRTLRQAGGLSGFTKRAESEYDPFGAAHSSTSI 125

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVA ++ G++  ++ VI +G+  AG AYEAM+NAG LD+ +IVILND+  S+ P
Sbjct: 126 SAGLGMAVASELSGEKRNVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAP 185

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S+ L+R+ S +++R +RE AK + +++ + + + A K +EYAR    
Sbjct: 186 --------PTGAMSAYLARLVSGRTYRSVREAAKQVAQKLPKFLQDKARKSEEYARAFF- 236

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G TLFEELG YY+GP+DGHN++ L+ VL+ V      GPVL+HVVT++ +       +
Sbjct: 237 -TGGTLFEELGFYYVGPIDGHNLDHLLPVLKNVRDT-QKGPVLIHVVTQKGK---GYAPA 291

Query: 379 EAIEKQQEGASDSNSL------PFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
           EA   +  G +  + +      P  N + +Y   F  +L+ EA  D  IV V A M    
Sbjct: 292 EAAADKYHGVNKFDVITGKQAKPPAN-APSYTKIFGTSLIEEARHDDKIVAVTAAMPTGT 350

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            L LF E FP+R FDVG+AEQHAVTF+AGLA  G KPFC I S FLQR YDQVV+DV  Q
Sbjct: 351 GLDLFGEAFPKRVFDVGIAEQHAVTFAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQ 410

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
            LPVRF I  AGLVG+DGPT  G+FD  F++ LP  +VMA SDE EL  MV T A  D+ 
Sbjct: 411 NLPVRFPIDRAGLVGADGPTHAGSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEG 470

Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
           P+ FRYPRG  V  DLP  RG  +EIGKG+++ EG  VALL +G  +Q CL A   L   
Sbjct: 471 PISFRYPRGDGVGVDLP-ERGSVLEIGKGRIVREGTKVALLSFGTRLQECLAAAEELGAA 529

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 672
           G+  TVADARF KPLD  L+R L + H  L+ VEEG++GGF SHV  F+A DGLLD G+K
Sbjct: 530 GLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFSSHVLQFLATDGLLDRGLK 589

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
            R ++LPD Y +H  P    A AGL    I  T  + L R
Sbjct: 590 VRALMLPDIYQDHGKPDAMYAEAGLDRTGIVRTVFAALHR 629


>gi|365881074|ref|ZP_09420405.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein
           [Bradyrhizobium sp. ORS 375]
 gi|365290782|emb|CCD92936.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein
           [Bradyrhizobium sp. ORS 375]
          Length = 641

 Score =  596 bits (1536), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 303/639 (47%), Positives = 417/639 (65%), Gaps = 19/639 (2%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD ++ P  L+ L +++++Q+A E+R E    VS T     + L  VELT A+H+VF
Sbjct: 7   TPLLDTIKTPEDLRRLKVEQVRQVADELRQETIDAVSVTGGHFGAGLGVVELTTAIHYVF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR  I TLR   G+SG+T R+ES+YDPF A H   S+
Sbjct: 67  DTPRDRLIWDVGHQAYPHKILTGRRDRIRTLRTGGGLSGFTKRTESDYDPFGAAHSSTSI 126

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVARD+ G +  ++ VI +G   AG AYEAM+NAG ++S +IVILND+  S+ P
Sbjct: 127 SAGLGMAVARDLSGGKNNVIAVIGDGAMSAGMAYEAMNNAGAMNSRLIVILNDNDMSIAP 186

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                    + A+S+ LSR+ S K++R LR+ AK + + + + +   A++V+EY+RG + 
Sbjct: 187 --------PVGAMSAYLSRLYSGKTYRTLRDAAKQLGQHLPKVIANRASRVEEYSRGFM- 237

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQ-- 376
             G TLFEELG YY+GP+DGHN++ L+ VL+ V  +   GP+LVHVVT++ +     +  
Sbjct: 238 MDGGTLFEELGFYYVGPIDGHNLDHLLPVLKNVRDM-ETGPILVHVVTQKGKGYSPAEAA 296

Query: 377 --KSEAIEKQQ-EGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
             K  A+ K      + + + P    +  Y + F ++LV EAEKD  +V + A M     
Sbjct: 297 ADKYHAVAKFDIATGTQAKAKP---NAPAYQNVFGQSLVKEAEKDDKVVGITAAMPSGTG 353

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           + +F + FP+R FDVG+AEQHAVTF+AGLA  G KPFC I S FLQR YDQ+V+DV  Q 
Sbjct: 354 IDIFAKAFPKRTFDVGIAEQHAVTFAAGLAAEGYKPFCAIYSTFLQRGYDQIVHDVCIQS 413

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPVRF I  AGLVG+DG T  G+FD  ++ CLPNM++MA SDE ELV MVAT  +IDDRP
Sbjct: 414 LPVRFAIDRAGLVGADGATHAGSFDNAYLGCLPNMVIMAASDEAELVHMVATQVAIDDRP 473

Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
              RYPRG     ++P   G+P+ IGKG+++ +GK VALL +G  +  C KA   L+  G
Sbjct: 474 SSVRYPRGEGRGVEMPEV-GVPLPIGKGRMIRQGKQVALLSFGTRLAECEKAADELAAHG 532

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKW 673
           +  ++ADARF KPLD +LV +L + H  LIT+EEGSIGGFGSHV  ++A  G+LD G+K 
Sbjct: 533 LSASIADARFMKPLDEELVLKLAREHEILITIEEGSIGGFGSHVMQYLADQGMLDGGLKM 592

Query: 674 RPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
           R +VLPD + +H +P    A AGL    I       LG+
Sbjct: 593 RTMVLPDEFQDHDTPAAMYARAGLDAKGIVRKVFEALGK 631


>gi|407770454|ref|ZP_11117823.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thalassospira xiamenensis
           M-5 = DSM 17429]
 gi|407286477|gb|EKF11964.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thalassospira xiamenensis
           M-5 = DSM 17429]
          Length = 639

 Score =  596 bits (1536), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 309/644 (47%), Positives = 412/644 (63%), Gaps = 30/644 (4%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD ++ P  L+SL   ++KQ+A E+R+E+   VS T   L + L  VELTVA+H++F
Sbjct: 7   TPLLDTIKIPADLRSLQPAQMKQVADELRAEVIDAVSVTGGHLGAGLGVVELTVAIHYLF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR  I TLR+  G+SG+T RSESEYDPF AGH   S+
Sbjct: 67  DTPDDRLIWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTKRSESEYDPFGAGHSSTSI 126

Query: 199 SAGLGMAVARDIKG-KRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLH 257
           SAGLGMAVA  +   KR+ ++ VI +G+  AG AYEAM+NA   D  MIVILND+  S+ 
Sbjct: 127 SAGLGMAVANQLSDDKRKNVIAVIGDGSMSAGMAYEAMNNAAAADQRMIVILNDNDMSIA 186

Query: 258 PKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMI 317
           P         + ++S  LSR+ S K ++ LR  AKG+TK + R + E A K++EY RGM+
Sbjct: 187 P--------PVGSMSGYLSRLISGKGYQGLRNAAKGLTKHLPRQIEEAARKIEEYTRGMV 238

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR------- 370
              G TLFEE+G +Y+GP+DGHN++ L+ VL+ V      GP+LVHVVT++ +       
Sbjct: 239 --TGGTLFEEMGFFYVGPIDGHNLDHLLPVLKNVRDADVDGPILVHVVTQKGKGYGPAEN 296

Query: 371 ---RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAG 427
              +     K + +  +Q  A+ +        + +Y   + E L   AE D  I  + A 
Sbjct: 297 AADKYHGVAKFDVVTGKQAKATPN--------APSYTKVYGETLTKLAETDDKITAITAA 348

Query: 428 MEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVN 487
           M     + +F E+FP+R FDVG+AEQHAVTF+AG+AC G KPFC + S FLQRAYDQVV+
Sbjct: 349 MPSGTGVNIFAERFPDRAFDVGIAEQHAVTFAAGMACEGYKPFCTLYSTFLQRAYDQVVH 408

Query: 488 DVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVA 547
           DV  Q LPVRF +  AGLVG+DG T  GA+DI ++ CLPN+++MA +DE ELV M  T  
Sbjct: 409 DVVIQNLPVRFAMDRAGLVGADGATHAGAYDIAYLGCLPNIVLMAAADEAELVHMTTTAW 468

Query: 548 SIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARA 607
           +IDDRP  FRYPRG  V  ++P   G  +EIGKG++L EG  +A+L YG  +   + A  
Sbjct: 469 AIDDRPSAFRYPRGEGVGVEMPA-EGKVLEIGKGRILREGGKIAILSYGTRLAEAMLAAE 527

Query: 608 LLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLL 667
            L+  G+  TVADARF KPLD  L+ +L +NH  LIT+EEGSIGGFG+ V   +A  GLL
Sbjct: 528 DLAARGLPATVADARFAKPLDHALIADLARNHEVLITIEEGSIGGFGAMVLQHMAGQGLL 587

Query: 668 DSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
           D G+K R + LPD  I+H  P  Q A AGL    I  TAL  LG
Sbjct: 588 DHGLKVRTMALPDALIDHDKPDIQYAKAGLDAQSIVKTALGALG 631


>gi|146339201|ref|YP_001204249.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bradyrhizobium sp. ORS
           278]
 gi|259645380|sp|A4YQ36.1|DXS_BRASO RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|146192007|emb|CAL76012.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein
           [Bradyrhizobium sp. ORS 278]
          Length = 641

 Score =  595 bits (1535), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 304/643 (47%), Positives = 420/643 (65%), Gaps = 19/643 (2%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD ++ P  L+ L +++++Q+A E+R E    VS T     + L  VELT A+H+VF
Sbjct: 7   TPLLDTIKTPEDLRRLKVEQVRQVADELRQETIDAVSVTGGHFGAGLGVVELTTAIHYVF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR  I TLR   G+SG+T R+ES+YDPF A H   S+
Sbjct: 67  DTPRDRLIWDVGHQAYPHKILTGRRDRIRTLRTGGGLSGFTKRAESDYDPFGAAHSSTSI 126

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVARD+ G +  ++ VI +G   AG AYEAM+NAG ++S +IVILND+  S+ P
Sbjct: 127 SAGLGMAVARDLSGGKNNVIAVIGDGAMSAGMAYEAMNNAGAMNSRLIVILNDNDMSIAP 186

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                    + A+S+ LSR+ S K++R LR+ AK + + + + +   A++V+EY+RG + 
Sbjct: 187 --------PVGAMSAYLSRLYSGKTYRTLRDAAKQLGQHLPKVIANRASRVEEYSRGFM- 237

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQ-- 376
             G TLFEELG YY+GP+DGHN++ L+ VL+ V  +   GP+LVHVVT++ +     +  
Sbjct: 238 MDGGTLFEELGFYYVGPIDGHNLDHLLPVLKNVRDM-ETGPILVHVVTQKGKGYSPAEAA 296

Query: 377 --KSEAIEKQQ-EGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
             K  A+ K      + + + P    +  Y + F ++LV EAEKD+ IV + A M     
Sbjct: 297 ADKYHAVAKFDIATGTQAKAKP---NAPAYQNVFGQSLVKEAEKDEKIVGITAAMPSGTG 353

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           + +F + FP+R FDVG+AEQHAVTF+AGLA  G KPFC I S FLQR YDQ+V+DV  Q 
Sbjct: 354 IDIFAKAFPKRTFDVGIAEQHAVTFAAGLAAEGYKPFCAIYSTFLQRGYDQIVHDVCIQS 413

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPVRF I  AGLVG+DG T  G+FD  ++ CLPNM++MA SDE ELV MVAT  +IDDRP
Sbjct: 414 LPVRFAIDRAGLVGADGATHAGSFDNAYLGCLPNMVIMAASDEAELVHMVATQVAIDDRP 473

Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
              RYPRG     ++P   G+ + IGKG+++ +GK VALL +G  +  C KA   L+  G
Sbjct: 474 SSVRYPRGEGRGVEMPEV-GVALPIGKGRMIRQGKQVALLSFGTRLAECEKAADELAAHG 532

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKW 673
           +  ++ADARF KPLD +LV +L ++H  LIT+EEGSIGGFGSHV  ++A  G+LD G+K 
Sbjct: 533 LSASIADARFMKPLDEELVLKLARDHEILITIEEGSIGGFGSHVMQYLADQGMLDGGLKM 592

Query: 674 RPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREA 716
           R +VLPD + +H +P    A AGL    I      +LG+   A
Sbjct: 593 RSMVLPDEFQDHDTPAAMYARAGLDAKGIVRKVFEVLGKDYAA 635


>gi|148253965|ref|YP_001238550.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bradyrhizobium sp. BTAi1]
 gi|259645379|sp|A5EEQ0.1|DXS_BRASB RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|146406138|gb|ABQ34644.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bradyrhizobium sp. BTAi1]
          Length = 641

 Score =  595 bits (1534), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 301/643 (46%), Positives = 417/643 (64%), Gaps = 19/643 (2%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD ++ P  L+ L +++++Q+A E+R E    VS T     + L  VELT A+H+VF
Sbjct: 7   TPLLDTIKTPEDLRRLKVEQVRQVADELRQETIDAVSVTGGHFGAGLGVVELTTAIHYVF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR  I TLR   G+SG+T R+ES+YDPF A H   S+
Sbjct: 67  DTPRDRLIWDVGHQAYPHKILTGRRDRIRTLRTGGGLSGFTKRTESDYDPFGAAHSSTSI 126

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVARD+ G +  ++ VI +G   AG AYEAM+NAG ++S +IVILND+  S+ P
Sbjct: 127 SAGLGMAVARDLSGGKNNVIAVIGDGAMSAGMAYEAMNNAGAMNSRLIVILNDNDMSIAP 186

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                    + A+S+ LSR+ S K++R LR+ AK + + + + +   A++V+EY+RG + 
Sbjct: 187 --------PVGAMSAYLSRLYSGKTYRTLRDAAKQLGQHLPKVIANRASRVEEYSRGFM- 237

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR-----RAE 373
             G TLFEELG YY+GP+DGHN++ L+ VL+ V  +   GP+LVHVVT++ +      A 
Sbjct: 238 MDGGTLFEELGFYYVGPIDGHNLDHLLPVLKNVRDM-ETGPILVHVVTQKGKGYPPAEAS 296

Query: 374 DTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
             +    ++      + + + P    +  Y + F ++LV EAEKD  +V + A M     
Sbjct: 297 ADKYHAVVKFDVATGTQAKAKP---NAPAYQNVFGQSLVKEAEKDDKVVGITAAMPSGTG 353

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           + +F + FP+R FDVG+AEQHAVTF+AGLA  G KPFC I S FLQR YDQ+V+DV  Q 
Sbjct: 354 IDIFAKAFPKRTFDVGIAEQHAVTFAAGLAAEGFKPFCAIYSTFLQRGYDQIVHDVCIQS 413

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPVRF I  AGLVG+DG T  G+FD  ++ CLPNM++MA SDE ELV MVAT  +I+DRP
Sbjct: 414 LPVRFAIDRAGLVGADGATHAGSFDNAYLGCLPNMVIMAASDEAELVHMVATQVAINDRP 473

Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
              RYPRG     ++P   G+P+ IGKG+++ +GK VALL +G  +  C KA   L+  G
Sbjct: 474 SSVRYPRGEGRGVEMPEV-GVPLPIGKGRMIRQGKQVALLSFGTRLAECEKAADELAAHG 532

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKW 673
           +  ++ADARF KPLD +LV +L + H  LIT+EEGSIGGFGSHV  ++A  G+LD G+K 
Sbjct: 533 LSASIADARFMKPLDEELVLKLAREHEILITIEEGSIGGFGSHVMQYLADQGMLDGGLKM 592

Query: 674 RPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREA 716
           R +VLPD + +H +P    A AGL    I       LG+   A
Sbjct: 593 RSMVLPDEFQDHDTPAAMYARAGLDAKGIVRKVFEALGKDYTA 635


>gi|296444536|ref|ZP_06886500.1| deoxyxylulose-5-phosphate synthase [Methylosinus trichosporium
           OB3b]
 gi|296257804|gb|EFH04867.1| deoxyxylulose-5-phosphate synthase [Methylosinus trichosporium
           OB3b]
          Length = 643

 Score =  595 bits (1533), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 317/651 (48%), Positives = 411/651 (63%), Gaps = 24/651 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD ++ P  L+ L   +L Q+A E+R E    VS T   L + L  VELTVALH+VF
Sbjct: 6   TPLLDRIDTPQDLRKLHPSQLPQIADELRRETIDAVSVTGGHLGAGLGVVELTVALHYVF 65

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+I+WDVG QTY HKILTGRR  I +LR+  G+SG++ R+ESEYD F AGH   S+
Sbjct: 66  DTPNDRIIWDVGHQTYPHKILTGRRDRIRSLRQGGGLSGFSKRAESEYDAFGAGHSSTSI 125

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMA+ RD+ G    +V VI +    AG AYEAM+NAG LDS +IVILND+  S+ P
Sbjct: 126 SAGLGMAIGRDLSGGNNHVVAVIGDSALSAGMAYEAMNNAGALDSRLIVILNDNDMSIAP 185

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S+ L+R+ S  ++R LRE AK + + +   +++ A K +E++R  I 
Sbjct: 186 PT--------GAMSAYLARLVSGGAYRTLRETAKQLARHLPHFLYDKARKAEEFSRSFI- 236

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G T+FEELG YY+GP+DGHN+E L+ VL  V      GPVLVHVVT++ +       +
Sbjct: 237 TGGGTMFEELGFYYVGPIDGHNLEHLLPVLTNVRDKDD-GPVLVHVVTQKGK---GYGPA 292

Query: 379 EAIEKQQEGASDSNSL------PFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
           EA   +  G +  + L      P  N + +Y   F ++LV EAE+D  IV + A M    
Sbjct: 293 EAAADRYHGVNRFDVLTGAQDKPKAN-APSYTSVFAKSLVAEAERDDKIVAITAAMPGGT 351

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            L LF++ FP+R FDV +AEQHAVTF+AGLAC G KPFC + S FLQRAYDQVV+DV  Q
Sbjct: 352 GLDLFEKAFPDRTFDVAIAEQHAVTFAAGLACEGYKPFCALYSTFLQRAYDQVVHDVAIQ 411

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
            LPVRF I  AGLVG+DGPT  GAFD+ ++ C+P M++MA +DE ELV MVAT    D+ 
Sbjct: 412 HLPVRFAIDRAGLVGADGPTHAGAFDVAYLGCIPGMVIMAAADEAELVHMVATAVQYDEG 471

Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
           P+ FRYPRG  V  DLP  RG P+EIG+G++L EG  VALL  G  +   L A   L+  
Sbjct: 472 PIAFRYPRGEGVGLDLP-QRGEPLEIGRGRILREGSQVALLSLGTRLAEALTAAQELTAR 530

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLD---S 669
           G+ VTVADARF KP+D  L+R L   H  LIT+EEGSIGGFG+    F++ +G LD    
Sbjct: 531 GVSVTVADARFAKPIDRDLLRRLAAEHEVLITIEEGSIGGFGAQAFQFLSEEGALDGTRG 590

Query: 670 GVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLLM 720
             K+R ++LPD YI+H      LA A L    I A AL  LG  R A   M
Sbjct: 591 AFKFRSMILPDIYIDHDKQDIMLAKASLDARAIVAKALETLGDERGAARAM 641


>gi|85717532|ref|ZP_01048477.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrobacter sp. Nb-311A]
 gi|85695649|gb|EAQ33562.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrobacter sp. Nb-311A]
          Length = 642

 Score =  595 bits (1533), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 303/640 (47%), Positives = 414/640 (64%), Gaps = 20/640 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD +  P  L+ L +++L+Q+A E+R E    VS T     + L  VELT A+H++F
Sbjct: 7   TPLLDTIRTPADLRKLKVEQLRQIADELRLETIDAVSVTGGHFGAGLGVVELTTAIHYIF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR  I TLR   G+SG+T R+ES+YDPF A H   S+
Sbjct: 67  DTPRDRLIWDVGHQAYPHKILTGRRDRIRTLRTGGGLSGFTKRTESDYDPFGAAHSSTSI 126

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LGMAVARD+ G +  ++ VI +G   AG AYEAM+NAG ++S +IVILND+  S+ P
Sbjct: 127 SASLGMAVARDLSGGKNNVIAVIGDGAMSAGMAYEAMNNAGAMNSRLIVILNDNDMSIAP 186

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                    + A+S+ LSR+ S K++R LRE AK + K + + + + A +V+EY+RG + 
Sbjct: 187 --------PVGAMSAYLSRLYSGKTYRSLREAAKQLGKHLPKMIADRAERVEEYSRGFMT 238

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR-----RAE 373
             G TLFEELG YY+GP+DGHN++ L+ VL+ V  + + GP+LVHVVT++ +      A 
Sbjct: 239 NSG-TLFEELGFYYVGPIDGHNLDHLLPVLKNVRDMEN-GPILVHVVTQKGKGYPPAEAA 296

Query: 374 DTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
             +    ++      + S S P    +  Y + F ++LV EAEKD  IV + A M     
Sbjct: 297 ADKYHAVVKFDVSTGAQSKSKP---NAPAYQNVFGQSLVKEAEKDDRIVAITAAMPSGTG 353

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           + +F + FPER FDVG+AEQHAVTF+AGLA  G KPFC I S FLQR YDQVV+DV  Q 
Sbjct: 354 VDIFNKAFPERTFDVGIAEQHAVTFAAGLATEGFKPFCAIYSTFLQRGYDQVVHDVAIQS 413

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPVRF I  AGLVG+DG T  G+FD  F+ CLPNM++MA +DE ELV MVAT  +I+DRP
Sbjct: 414 LPVRFAIDRAGLVGADGATHAGSFDNAFLGCLPNMVIMAAADESELVHMVATQVAINDRP 473

Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
              RYPRG     ++P   G+P+ IGKG+++ +G  +ALL +G  +  C KA   L+  G
Sbjct: 474 SAVRYPRGEGRGVEMPEV-GVPLPIGKGRIVRQGSKIALLSFGTRLAECEKAADELAAHG 532

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSG-VK 672
           +  TVADARF KPLD  LV  L ++H  L+T+EEGSIGGFG+HV   +  +G LD+G V+
Sbjct: 533 LSTTVADARFMKPLDEDLVLRLARDHDVLVTIEEGSIGGFGAHVLQTLTDNGALDTGLVR 592

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
            R ++LPD +++H +P    A AGL    I A     LG+
Sbjct: 593 VRSMILPDEFLDHDTPAAMYARAGLDAKGIVAKVFEALGK 632


>gi|365886052|ref|ZP_09425024.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein
           [Bradyrhizobium sp. STM 3809]
 gi|365338480|emb|CCD97555.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein
           [Bradyrhizobium sp. STM 3809]
          Length = 641

 Score =  595 bits (1533), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 303/643 (47%), Positives = 420/643 (65%), Gaps = 19/643 (2%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD ++ P  L+ L +++++Q+A E+R E    VS T     + L  VELT A+H+VF
Sbjct: 7   TPLLDTIKTPEDLRRLKVEQVRQVADELRQETIDAVSVTGGHFGAGLGVVELTTAIHYVF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR  I TLR   G+SG+T R+ES+YDPF A H   S+
Sbjct: 67  DTPRDRLIWDVGHQAYPHKILTGRRDRIRTLRTGGGLSGFTKRTESDYDPFGAAHSSTSI 126

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVARD+ G +  ++ VI +G   AG AYEAM+NAG ++S +IVILND+  S+ P
Sbjct: 127 SAGLGMAVARDLSGGKNNVIAVIGDGAMSAGMAYEAMNNAGAMNSRLIVILNDNDMSIAP 186

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                    + A+S+ LSR+ S K++R LR+ AK + + + + +   A++V+EY+RG + 
Sbjct: 187 --------PVGAMSAYLSRLYSGKTYRTLRDAAKQLGQHLPKVIANRASRVEEYSRGFM- 237

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQ-- 376
             G TLFEELG YY+GP+DGHN++ L+ VL+ V  +   GP+LVHVVT++ +     +  
Sbjct: 238 MDGGTLFEELGFYYVGPIDGHNLDHLLPVLKNVRDM-ETGPILVHVVTQKGKGYSPAEAA 296

Query: 377 --KSEAIEKQQ-EGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
             K  A+ K      + + + P    +  Y + F ++LV EAEKD  IV + A M     
Sbjct: 297 ADKYHAVAKFDIATGTQAKAKP---NAPAYQNVFGQSLVKEAEKDDKIVGITAAMPSGTG 353

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           + +F + FP+R FDVG+AEQHAVTF+AGLA  G K FC I S FLQR YDQ+V+DV  Q 
Sbjct: 354 IDIFAKAFPKRTFDVGIAEQHAVTFAAGLAAEGYKAFCAIYSTFLQRGYDQIVHDVCIQS 413

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPVRF I  AGLVG+DG T  G+FD  ++ CLPNM++MA +DE ELV MVAT  +I+DRP
Sbjct: 414 LPVRFAIDRAGLVGADGATHAGSFDNAYLGCLPNMVIMAAADEAELVHMVATQVAINDRP 473

Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
              RYPRG     ++P   G+P+ IGKG+++ +GK +ALL +G  +  C KA   L+  G
Sbjct: 474 SSVRYPRGEGRGVEMPEV-GVPLPIGKGRMIRQGKQIALLSFGTRLAECEKAADELAAHG 532

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKW 673
           +  ++ADARF KPLD +LV +L ++H  LIT+EEGSIGGFGSHV  F+A  G+LD G+K 
Sbjct: 533 LSASIADARFMKPLDEELVLKLARDHEILITIEEGSIGGFGSHVMQFLADQGMLDGGLKM 592

Query: 674 RPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREA 716
           R +VLPD + +H +PT   A AGL    I      +LG+   A
Sbjct: 593 RSMVLPDEFQDHDTPTAMYARAGLDAKGIVRKVFEVLGKDYTA 635


>gi|86751558|ref|YP_488054.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodopseudomonas palustris
           HaA2]
 gi|118595612|sp|Q2IRL7.1|DXS_RHOP2 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|86574586|gb|ABD09143.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Rhodopseudomonas palustris
           HaA2]
          Length = 638

 Score =  594 bits (1532), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 307/642 (47%), Positives = 413/642 (64%), Gaps = 17/642 (2%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD +  P  L+ L I +++Q+A E+R E    VS T     + L  VELT A+H+VF
Sbjct: 4   TPLLDTIRTPDDLRKLRIDQVQQVADELRQETIDAVSVTGGHFGAGLGVVELTTAIHYVF 63

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR  I TLR   G+SG+T R+ES+YDPF A H   S+
Sbjct: 64  DTPRDRLIWDVGHQAYPHKILTGRRDRIRTLRTAGGLSGFTKRTESDYDPFGAAHSSTSI 123

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVARD+ G    ++ VI +G+  AG AYEAM+NAG ++S +IVILND+  S+ P
Sbjct: 124 SAGLGMAVARDLAGGTNNVIAVIGDGSISAGMAYEAMNNAGAMNSRLIVILNDNNMSIAP 183

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARG-MI 317
                    + A+S+ LSR+ S K++R LRE  K + K + + + + AA+ +EY+RG M+
Sbjct: 184 --------PVGAMSAYLSRLYSGKTYRSLREAGKQIGKHLPKLIADRAARAEEYSRGFMM 235

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRR---AED 374
           G  G TLFEELG YY+GP+DGHN++ L+ +LQ V      GP L+HVVT++ +    AE 
Sbjct: 236 G--GGTLFEELGFYYVGPIDGHNLDHLLPILQNVRD-AETGPFLIHVVTQKGKGYAPAEA 292

Query: 375 TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
                    + + A+ + +    N + +Y + F ++LV EA KD  +V + A M     +
Sbjct: 293 ASDKYHAVVKFDIATGTQAKAKSN-APSYQNVFGQSLVKEAAKDDKVVGITAAMPSGTGI 351

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
            +F++ FP+R FDVG+AEQHAVTF+AGLA  G KPFC I S FLQR YDQ+V+DV  Q L
Sbjct: 352 DIFEKAFPDRTFDVGIAEQHAVTFAAGLATEGFKPFCAIYSTFLQRGYDQIVHDVAIQSL 411

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PVRF I  AGLVG+DG T  G+FD  ++ CLPN ++MA SDE ELV MVAT  +I+DRP 
Sbjct: 412 PVRFAIDRAGLVGADGATHAGSFDNAYLGCLPNFVIMAASDEAELVHMVATQVAINDRPS 471

Query: 555 CFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGI 614
             RYPRG     ++P   G+P+EIGKG+V+ +G  VALL +G  +  C KA   L+ LG+
Sbjct: 472 AVRYPRGEGRGVEMPDV-GVPLEIGKGRVIRQGNKVALLSFGTRLAECEKAAEELATLGL 530

Query: 615 DVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWR 674
             TVADARF KPLD+ LV +L   H  LIT+EEGSIGGFGSHV   ++  G LD  VK R
Sbjct: 531 STTVADARFMKPLDVDLVIKLANEHEILITIEEGSIGGFGSHVMQTLSDHGKLDGEVKMR 590

Query: 675 PIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREA 716
            +VLPD +++H +P    A AGL    I       LG+   A
Sbjct: 591 AMVLPDVFLDHDTPAAMYAAAGLDAKAIVKKVFEALGKEHAA 632


>gi|338973399|ref|ZP_08628763.1| 1-deoxy-D-xylulose 5-phosphate synthase [Bradyrhizobiaceae
           bacterium SG-6C]
 gi|414170518|ref|ZP_11426072.1| 1-deoxy-D-xylulose-5-phosphate synthase [Afipia clevelandensis ATCC
           49720]
 gi|338233442|gb|EGP08568.1| 1-deoxy-D-xylulose 5-phosphate synthase [Bradyrhizobiaceae
           bacterium SG-6C]
 gi|410884296|gb|EKS32124.1| 1-deoxy-D-xylulose-5-phosphate synthase [Afipia clevelandensis ATCC
           49720]
          Length = 640

 Score =  594 bits (1532), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 306/637 (48%), Positives = 412/637 (64%), Gaps = 16/637 (2%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD    P  L+ L  ++L+Q A E+R E    VS T     + L  VELT ALH+VF
Sbjct: 7   TPLLDAAPTPDLLRKLKPEQLRQFADELRLETIDTVSVTGGHFGAGLGVVELTTALHYVF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+I+WDVG Q Y HKILTGRR  I TLR   G+SG+T R+ESEYDPF A H   S+
Sbjct: 67  NTPDDRIIWDVGHQAYPHKILTGRRDRIRTLRTGGGLSGFTKRAESEYDPFGAAHSSTSI 126

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVARD+ GK+  ++ VI +G+  AG AYEAM+NAG + S +IVILND+  S+ P
Sbjct: 127 SAGLGMAVARDLTGKKNNVIAVIGDGSMSAGMAYEAMNNAGAMHSRLIVILNDNDMSIAP 186

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                    + A+S+ L+R+ SS+++   RE  K +  ++ +   + A + +EYARGM+ 
Sbjct: 187 --------PVGAMSAYLARLLSSQTYGSAREALKNLAHKLPKFFEDRALRAEEYARGMV- 237

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRR---AEDT 375
             G TLFEELG +Y+GP+DGHN++ L+ VL  V   G+ GPVL+HVVT++ +    AE +
Sbjct: 238 -TGGTLFEELGFFYVGPIDGHNLDHLLPVLTNVRDAGN-GPVLIHVVTQKGKGYAPAEAS 295

Query: 376 QKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQ 435
                   + + A+ + +    N + +Y   F ++L+ EA+KD  IV + A M     + 
Sbjct: 296 ADKYHAVAKFDVATGAQAKAKSN-APSYTAVFGQSLIKEAQKDDKIVAITAAMPGGTGVD 354

Query: 436 LFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLP 495
           LF++ FPER FDVG+AEQHAVTF+AGLA  G KPFC I S FLQR YDQVV+DV  QRLP
Sbjct: 355 LFEKVFPERTFDVGIAEQHAVTFAAGLATEGFKPFCAIYSTFLQRGYDQVVHDVAIQRLP 414

Query: 496 VRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVC 555
           VRF I  AGLVG DGPT  G+FD  ++ CLP  ++MA +DE +LV MVAT  ++DD P  
Sbjct: 415 VRFAIDRAGLVGQDGPTHAGSFDNAYLGCLPGFVIMAAADEADLVHMVATQVALDDAPSA 474

Query: 556 FRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGID 615
            RYPRG     ++P   G+ + IGKG+++ EG  VALL +GA +  CLKA   L   G+ 
Sbjct: 475 LRYPRGEGRGVEMPEV-GVALPIGKGRIMREGSKVALLSFGARLGECLKAADELETHGLS 533

Query: 616 VTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWRP 675
            TVADARF KPLD+ ++ +L + H  LIT+EEGSIGGFG+HV   +A  G+LD G++ R 
Sbjct: 534 ATVADARFMKPLDLDMILKLAREHEVLITIEEGSIGGFGTHVLQTLADHGVLDRGLRVRN 593

Query: 676 IVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
           +VLPD +I+H SP    A AGL    I A     LG+
Sbjct: 594 MVLPDTFIDHDSPAAMYAQAGLDAKGIVAKVFEALGK 630


>gi|365855944|ref|ZP_09395974.1| 1-deoxy-D-xylulose-5-phosphate synthase, partial [Acetobacteraceae
           bacterium AT-5844]
 gi|363718654|gb|EHM01988.1| 1-deoxy-D-xylulose-5-phosphate synthase, partial [Acetobacteraceae
           bacterium AT-5844]
          Length = 642

 Score =  594 bits (1531), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 311/635 (48%), Positives = 408/635 (64%), Gaps = 28/635 (4%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V  P  LK+ +  +LKQ+A E+R+E    VS+T   L +SL  VELTVA+H VF
Sbjct: 19  TPMLDRVRLPADLKNFSADQLKQVADELRAETIHAVSQTGGHLGASLGVVELTVAIHAVF 78

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P DK++WDVG Q Y HKILTGRR  I TLR+  G+SG+T R+ESEYDPF A H   S+
Sbjct: 79  DTPKDKLIWDVGHQAYPHKILTGRRDRIRTLRQGGGLSGFTRRAESEYDPFGAAHSSTSI 138

Query: 199 SAGLGMAVARDI--------KGKR--ECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVI 248
           SAGLGMAVARD+         GKR  + ++ VI +G   AG AYEAM+NAG + S +IV+
Sbjct: 139 SAGLGMAVARDLLRGTPYSQGGKRNDQNVIAVIGDGAMSAGMAYEAMNNAGAMRSRLIVV 198

Query: 249 LNDSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAK 308
           LND+  S+ P +         A+S+ LSR+ SS+ F  LREV   + +R    +   A +
Sbjct: 199 LNDNDMSIAPPV--------GAMSAYLSRLISSRPFLSLREVMAKVARRFPAPLERAARR 250

Query: 309 VDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEE 368
            DE+ARGM+   G TLFEELG YY+GP+DGHN++ L+ +L+ +    +  PVL+HVVT++
Sbjct: 251 ADEFARGML--TGGTLFEELGFYYVGPIDGHNMDHLLPLLRNLRDAETGPPVLLHVVTQK 308

Query: 369 NRRAEDTQ----KSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVV 424
            +     +    K  A+ K           P G    TY   F  AL+ EAE+D+ IV V
Sbjct: 309 GKGYAPAEAAPDKYHAVAKFNVVTGTQTKAPPG--PPTYTKVFANALIAEAERDERIVAV 366

Query: 425 HAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQ 484
            A M     L LFQ++FP R FDVG+AEQHAVTF+AG+A  G+KPF  I S FLQRAYDQ
Sbjct: 367 TAAMPSGTGLDLFQKRFPRRTFDVGIAEQHAVTFAAGMATEGIKPFVAIYSTFLQRAYDQ 426

Query: 485 VVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVA 544
           VV+DV  Q+LPVRF +  AGLVG+DG T  GA+DI ++ C+P M++MAP+DE EL  MVA
Sbjct: 427 VVHDVALQKLPVRFALDRAGLVGADGATHAGAYDIAYLGCIPQMVLMAPADEAELAHMVA 486

Query: 545 TVASIDDRPVCFRYPRG-AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCL 603
           T A+ DD P+  R+PRG      ++P  RG P+EIG+G+VL EG  VALL YG  +Q CL
Sbjct: 487 TAAAFDDGPIALRFPRGEGFGLAEVPA-RGTPVEIGRGRVLREGTSVALLSYGTRLQECL 545

Query: 604 KARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIAL 663
           +A   L+  G+  TVADARF KPLD  LV  L + H  L+T+EEGS  GFG+ V   +A 
Sbjct: 546 QAAEELAAHGLSCTVADARFAKPLDTTLVERLAREHEVLVTIEEGSACGFGALVMQHLAW 605

Query: 664 DGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLT 698
            G LD G+K RPI LPD +I+H +P  Q    G++
Sbjct: 606 AGALDHGLKLRPICLPDTFIDHDTPKAQYDNNGMS 640


>gi|242043234|ref|XP_002459488.1| hypothetical protein SORBIDRAFT_02g005410 [Sorghum bicolor]
 gi|241922865|gb|EER96009.1| hypothetical protein SORBIDRAFT_02g005410 [Sorghum bicolor]
          Length = 517

 Score =  594 bits (1531), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 298/523 (56%), Positives = 377/523 (72%), Gaps = 14/523 (2%)

Query: 204 MAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH-SLHPKIEE 262
           MAVARD+ G++  +++VI +G   AGQAYEAM+N+G+LD+NMIV+LND++  SL     +
Sbjct: 1   MAVARDLLGRKNHVISVIGDGAMTAGQAYEAMNNSGFLDANMIVVLNDNKQVSLPTATLD 60

Query: 263 SPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQGS 322
            P   + ALS  L+++QSS  FR+LRE AK +TK+IG   HE AAKVDEYARGMI   GS
Sbjct: 61  GPSKPVGALSRALTKLQSSTKFRRLREAAKSVTKQIGGPTHEVAAKVDEYARGMISAWGS 120

Query: 323 TLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSEAIE 382
           +LFEELGLYYIGPVDGH++EDL+++ ++V ++ + GPVL+H+VTE+ +       +EA  
Sbjct: 121 SLFEELGLYYIGPVDGHSVEDLVTIFEKVKAMPAPGPVLIHIVTEKGK---GYLPAEAAA 177

Query: 383 KQQEGA-----SDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLF 437
            +  G      S    L   + + +Y   F E+L M  +K   +V +HA M     L  F
Sbjct: 178 DRMHGVVKFEPSTGKQLKSKSSTLSYTQYFAESL-MGGDK---VVAIHAAMGGGTGLNYF 233

Query: 438 QEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVR 497
           Q++FPER FDVG+ EQHAVTF+AGLA  GLKPFC I S+FLQR YDQVV+DVD QRLPVR
Sbjct: 234 QKRFPERCFDVGITEQHAVTFAAGLAAEGLKPFCAIYSSFLQRGYDQVVHDVDLQRLPVR 293

Query: 498 FVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFR 557
           F +  AGLVG+DGPT CGAFD+T+M+CLPNM+VMAP+DE EL+ MVAT A+IDDRP CFR
Sbjct: 294 FALDHAGLVGADGPTHCGAFDVTYMACLPNMVVMAPADEAELMHMVATAAAIDDRPSCFR 353

Query: 558 YPRGAIVRTDLP-GYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDV 616
           +PRG  V   LP G +G P+E+G+G+VLV G  VALLGYG MVQ CLKA   L +  + V
Sbjct: 354 FPRGNGVGAVLPAGNKGTPLEVGRGRVLVGGNRVALLGYGTMVQACLKAAEALKEHDVYV 413

Query: 617 TVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWRPI 676
           TVADARFCKPLD  L+REL   H  LIT EEGSIGGFGSHV H+++L GLLD  +K R +
Sbjct: 414 TVADARFCKPLDTGLIRELAAEHEVLITAEEGSIGGFGSHVGHYLSLTGLLDGPLKLRSM 473

Query: 677 VLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLL 719
            LPD YI+H +P  Q+  AGLT  HIAAT LSLLGR  EA+ L
Sbjct: 474 FLPDRYIDHGAPQDQMEEAGLTPRHIAATVLSLLGRPLEAMQL 516


>gi|456356899|dbj|BAM91344.1| 1-deoxy-D-xylulose 5-phosphate synthase [Agromonas oligotrophica
           S58]
          Length = 641

 Score =  594 bits (1531), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 302/643 (46%), Positives = 419/643 (65%), Gaps = 19/643 (2%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD ++ P  L+ L +++++Q+A E+R E    VS T     + L  VELT A+H+VF
Sbjct: 7   TPLLDTIKTPEDLRRLKVEQVRQVADELRQETIDAVSVTGGHFGAGLGVVELTTAIHYVF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR  I TLR   G+SG+T R+ES+YDPF A H   S+
Sbjct: 67  DTPRDRLIWDVGHQAYPHKILTGRRDRIRTLRTGGGLSGFTKRTESDYDPFGAAHSSTSI 126

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVARD+ G +  ++ VI +G   AG AYEAM+NAG ++S +IVILND+  S+ P
Sbjct: 127 SAGLGMAVARDLAGGKNNVIAVIGDGAMSAGMAYEAMNNAGAMNSRLIVILNDNDMSIAP 186

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                    + A+S+ LSR+ S K++R LR+ AK + + + + +   A++V+EY+RG + 
Sbjct: 187 --------PVGAMSAYLSRLYSGKTYRTLRDAAKQLGQHLPKVIANRASRVEEYSRGFM- 237

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQ-- 376
             G TLFEELG YY+GP+DGHN++ L+ VL+ V  +   GP+LVHVVT++ +     +  
Sbjct: 238 MDGGTLFEELGFYYVGPIDGHNLDHLLPVLKNVRDM-ETGPILVHVVTQKGKGYSPAEAA 296

Query: 377 --KSEAIEKQQ-EGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
             K  A+ K      + + + P    +  Y + F ++LV EAEKD  IV + A M     
Sbjct: 297 ADKYHAVAKFDIATGTQAKAKP---NAPAYQNVFGQSLVKEAEKDDKIVGITAAMPSGTG 353

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           + +F + FP+R FDVG+AEQHAVTF+AGLA  G KPFC I S FLQR YDQ+V+DV  Q 
Sbjct: 354 IDIFAKAFPKRTFDVGIAEQHAVTFAAGLASEGYKPFCAIYSTFLQRGYDQIVHDVAIQS 413

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPVRF I  AGLVG+DG T  G+FD  ++ CLPNM++MA SDE ELV MVAT  +I+D+P
Sbjct: 414 LPVRFAIDRAGLVGADGATHAGSFDNAYLGCLPNMVIMAASDEAELVHMVATQVAINDKP 473

Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
              RYPRG     ++P + G+ + IGKG+++ +GK VALL +G  +  C KA   L+  G
Sbjct: 474 SAVRYPRGEGRGVEMPEF-GVALPIGKGRMIRQGKQVALLSFGTRLAECEKAADELAAHG 532

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKW 673
           +  ++ADARF KPLD +LV +L + H  LIT+EEGSIGGFGSHV  ++A  G+LD G+K 
Sbjct: 533 LSASIADARFMKPLDEELVMKLAREHDILITIEEGSIGGFGSHVMQYLADQGMLDGGLKM 592

Query: 674 RPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREA 716
           R +VLPD + +H +P    A AGL    I       LG+  +A
Sbjct: 593 RSMVLPDEFQDHDTPAAMYARAGLDAKGIVRKVFEALGKDYKA 635


>gi|75674831|ref|YP_317252.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrobacter winogradskyi
           Nb-255]
 gi|118595594|sp|Q3SUZ1.1|DXS_NITWN RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|74419701|gb|ABA03900.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrobacter winogradskyi
           Nb-255]
          Length = 666

 Score =  593 bits (1528), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 306/657 (46%), Positives = 418/657 (63%), Gaps = 22/657 (3%)

Query: 62  RICALPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSL 121
           R C + ++     D   TP+LD +  P  L+ L +++++Q+A E+R E    VS T    
Sbjct: 16  RTCQIGNVA--VTDFSSTPLLDTIRTPADLRKLKVEQVRQVADELRLETIDAVSVTGGHF 73

Query: 122 KSSLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSR 181
            + L  VELT A+H++F  P D+++WDVG Q Y HKILTGRR  I TLR   G+SG+T R
Sbjct: 74  GAGLGVVELTTAIHYIFDTPRDRLIWDVGHQAYPHKILTGRRDRIRTLRTGGGLSGFTKR 133

Query: 182 SESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL 241
           +ES+YDPF A H   S+SA LGMAVARD+ G    ++ VI +G   AG AYEAM+NAG +
Sbjct: 134 TESDYDPFGAAHSSTSISASLGMAVARDLSGGNNNVIAVIGDGAMSAGMAYEAMNNAGAM 193

Query: 242 DSNMIVILNDSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRG 301
           +S +IVILND+  S+ P +         A+S+ LSR+ S K++R LRE AK + K + + 
Sbjct: 194 NSRLIVILNDNDMSIAPPV--------GAMSAYLSRLYSGKTYRSLREAAKQLGKHLPKM 245

Query: 302 MHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVL 361
           + + A +V+EY+RG +   G TLFEELG YY+GP+DGHN++ L+ VL+ V  + + GP+L
Sbjct: 246 IADRAERVEEYSRGFMTNSG-TLFEELGFYYVGPIDGHNLDHLLPVLKNVRDMEN-GPIL 303

Query: 362 VHVVTEENR-----RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAE 416
           VHVVT++ +      A   +    ++      + S S P    + +Y + F  +LV EAE
Sbjct: 304 VHVVTQKGKGYPPAEAAADKYHAVVKFDISTGAQSKSKP---NAPSYQNVFGASLVKEAE 360

Query: 417 KDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSA 476
           KD  IV + A M     + +F   FPER FDVG+AEQHAVTF+AGLA  G KPFC I S 
Sbjct: 361 KDDKIVAITAAMPSGTGVDIFNNAFPERTFDVGIAEQHAVTFAAGLATEGFKPFCAIYST 420

Query: 477 FLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDE 536
           FLQR YDQVV+DV  Q LPVRF I  AGLVG+DG T  G+FD  F+ CLPNM++MA +DE
Sbjct: 421 FLQRGYDQVVHDVAIQSLPVRFAIDRAGLVGADGATHAGSFDNAFLGCLPNMVIMAAADE 480

Query: 537 DELVDMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYG 596
            ELV MVAT  +I+DRP   RYPRG     ++P   G+P+ IGKG+++ +G  +ALL +G
Sbjct: 481 AELVHMVATQVAINDRPSAVRYPRGEGRGVEMPEV-GVPLPIGKGRIVRQGSKIALLSFG 539

Query: 597 AMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSH 656
             +  C KA   L+  G+  T+ADARF KPLD+ L  +L + H  LIT+EEGSIGGFGSH
Sbjct: 540 TRLAECEKAADELAAHGLSTTIADARFMKPLDVDLALKLAREHDVLITIEEGSIGGFGSH 599

Query: 657 VSHFIALDGLLDSG-VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
           V   +  +G LD G V+ R ++LPD +++H +PT   A AGL    I A     LG+
Sbjct: 600 VMQTLMDNGALDGGLVRVRSMILPDEFLDHDTPTAMYARAGLDAKGIVAKVFEALGK 656


>gi|374330008|ref|YP_005080192.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudovibrio sp. FO-BEG1]
 gi|359342796|gb|AEV36170.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudovibrio sp. FO-BEG1]
          Length = 633

 Score =  593 bits (1528), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 310/638 (48%), Positives = 406/638 (63%), Gaps = 16/638 (2%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +LD + NP  LK +    L+Q+A E+R E+   VS T   L + L  VELTVALHHVF  
Sbjct: 3   LLDQIHNPSDLKKVPEDRLQQVAEELREEMVDAVSVTGGHLGAGLGVVELTVALHHVFDT 62

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+++WDVG Q Y HKILT R+  I TLR+  G+SG+T RSESEYDPF AGH   S+SA
Sbjct: 63  PKDRLIWDVGHQCYPHKILTDRKQRIRTLRQDGGLSGFTKRSESEYDPFGAGHSSTSISA 122

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKI 260
           GLGMAVARD+ G    ++ VI +G   AG AYEAM+NAG L+S +IVILND+  S+ P  
Sbjct: 123 GLGMAVARDLAGGDNNVIAVIGDGAMSAGMAYEAMNNAGALNSRLIVILNDNDMSIAP-- 180

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQ 320
                  + ALS++L+R+ S K++   RE AK +   + + + E AA+ +E+AR      
Sbjct: 181 ------PVGALSASLARLVSGKTYTGFREAAKQVASALPKPLQEKAAQAEEFARSFF--T 232

Query: 321 GSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRR---AEDTQK 377
           G TLFEELG YY+GPVDGHN++ L+ VL+ V      GP+LVHVVT++ +    AE+   
Sbjct: 233 GGTLFEELGFYYVGPVDGHNLDHLLPVLKNVRD-AKEGPILVHVVTQKGKGYLPAENASN 291

Query: 378 SEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLF 437
                 + +  +   S P  N + +Y   F  AL+ EA KD+ IV + A M     L +F
Sbjct: 292 KYHAVAKFDVVTGEQSKPKPN-APSYTRVFANALIEEANKDEKIVGITAAMPDGTGLDVF 350

Query: 438 QEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVR 497
           ++  P R FDVG+AEQHAVTF+AG+A  G KPFC I S FLQR YDQVV+DV  Q+LPVR
Sbjct: 351 EKVHPTRMFDVGIAEQHAVTFAAGMASEGYKPFCAIYSTFLQRGYDQVVHDVAIQKLPVR 410

Query: 498 FVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFR 557
           F I  AGLVG+DG T  G+FD  F+SCLP M+VM+P DE ELV MV+T A+ D+ P+ FR
Sbjct: 411 FPIDRAGLVGADGATHAGSFDTAFLSCLPGMVVMSPGDEAELVHMVSTAAAYDEGPIAFR 470

Query: 558 YPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVT 617
           YPRG  +  DLP   G P+EIGKG+++ EG  VAL+  G  +Q  LKA   L   G+  T
Sbjct: 471 YPRGEGIGIDLPEV-GTPLEIGKGRIVKEGSRVALVSLGGRLQEALKAADTLDAAGLSTT 529

Query: 618 VADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWRPIV 677
           VADARF KPLD  ++  L + H  LIT+EEGSIGGFGS V  F++ +GLLD  +K R ++
Sbjct: 530 VADARFAKPLDTDMIGRLAKEHDVLITIEEGSIGGFGSQVLQFLSDNGLLDGSLKVRSMI 589

Query: 678 LPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTRE 715
           LPD + +HA P      AGL    I       LG+  +
Sbjct: 590 LPDAFQDHAKPEAMYKDAGLDASGIVHRVFETLGKAED 627


>gi|254471675|ref|ZP_05085076.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudovibrio sp. JE062]
 gi|211958877|gb|EEA94076.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudovibrio sp. JE062]
          Length = 633

 Score =  593 bits (1528), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 310/638 (48%), Positives = 406/638 (63%), Gaps = 16/638 (2%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +LD + NP  LK +    L+Q+A E+R E+   VS T   L + L  VELTVALHHVF  
Sbjct: 3   LLDQIHNPSDLKKVPEDRLQQVAEELREEMVDAVSVTGGHLGAGLGVVELTVALHHVFDT 62

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+++WDVG Q Y HKILT R+  I TLR+  G+SG+T RSESEYDPF AGH   S+SA
Sbjct: 63  PKDRLIWDVGHQCYPHKILTDRKQRIRTLRQDGGLSGFTKRSESEYDPFGAGHSSTSISA 122

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKI 260
           GLGMAVARD+ G    ++ VI +G   AG AYEAM+NAG L+S +IVILND+  S+ P  
Sbjct: 123 GLGMAVARDLAGGDNNVIAVIGDGAMSAGMAYEAMNNAGALNSRLIVILNDNDMSIAP-- 180

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQ 320
                  + ALS++L+R+ S K++   RE AK +   + + + E AA+ +E+AR      
Sbjct: 181 ------PVGALSASLARLVSGKTYTGFREAAKQVASALPKPLQEKAAQAEEFARSFF--T 232

Query: 321 GSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRR---AEDTQK 377
           G TLFEELG YY+GPVDGHN++ L+ VL+ V      GP+LVHVVT++ +    AE+   
Sbjct: 233 GGTLFEELGFYYVGPVDGHNLDHLLPVLKNVRD-AKEGPILVHVVTQKGKGYLPAENASN 291

Query: 378 SEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLF 437
                 + +  +   S P  N + +Y   F  AL+ EA KD+ IV + A M     L +F
Sbjct: 292 KYHAVAKFDVVTGEQSKPKPN-APSYTRVFANALIEEANKDEKIVGITAAMPDGTGLDVF 350

Query: 438 QEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVR 497
           ++  P R FDVG+AEQHAVTF+AG+A  G KPFC I S FLQR YDQVV+DV  Q+LPVR
Sbjct: 351 EKVHPTRMFDVGIAEQHAVTFAAGMASEGYKPFCAIYSTFLQRGYDQVVHDVAIQKLPVR 410

Query: 498 FVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFR 557
           F I  AGLVG+DG T  G+FD  F+SCLP M+VM+P DE ELV MV+T A+ D+ P+ FR
Sbjct: 411 FPIDRAGLVGADGATHAGSFDTAFLSCLPGMVVMSPGDEAELVHMVSTAAAYDEGPIAFR 470

Query: 558 YPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVT 617
           YPRG  +  DLP   G P+EIGKG+++ EG  VAL+  G  +Q  LKA   L   G+  T
Sbjct: 471 YPRGEGIGIDLPEI-GTPLEIGKGRIVKEGSRVALVSLGGRLQEALKAADTLDAAGLSTT 529

Query: 618 VADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWRPIV 677
           VADARF KPLD  ++  L + H  LIT+EEGSIGGFGS V  F++ +GLLD  +K R ++
Sbjct: 530 VADARFAKPLDTDMIGRLAKEHDVLITIEEGSIGGFGSQVLQFLSDNGLLDGSLKVRSMI 589

Query: 678 LPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTRE 715
           LPD + +HA P      AGL    I       LG+  +
Sbjct: 590 LPDAFQDHAKPEAMYKDAGLDASGIVHRVFETLGKAED 627


>gi|115523090|ref|YP_780001.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodopseudomonas palustris
           BisA53]
 gi|122297370|sp|Q07SR3.1|DXS_RHOP5 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|115517037|gb|ABJ05021.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Rhodopseudomonas palustris
           BisA53]
          Length = 640

 Score =  592 bits (1527), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 307/646 (47%), Positives = 416/646 (64%), Gaps = 29/646 (4%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD +  P  L+ L I +++Q+A E+R E    VS T     + L  VELT A+H+VF
Sbjct: 7   TPLLDTIRTPDDLRKLRIDQVQQVADELRLETIDAVSVTGGHFGAGLGVVELTTAIHYVF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR  I TLR   G+SG+T R+ES++DPF AGH   S+
Sbjct: 67  DTPRDRLIWDVGHQAYPHKILTGRRDRIRTLRTGGGLSGFTKRTESDHDPFGAGHSSTSI 126

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVA D+ G +  ++ VI +G+  AG AYEAM+NAG ++S +IVILND+  S+ P
Sbjct: 127 SAGLGMAVASDLAGTKNNVIAVIGDGSISAGMAYEAMNNAGAMNSRLIVILNDNNMSIAP 186

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARG-MI 317
                    + A+S+ LSR+ S K++R LRE  K + K + + + + AA+ +EY+RG M+
Sbjct: 187 --------PVGAMSAYLSRLYSGKTYRSLREAGKQIGKHLPKLIADRAARAEEYSRGFMM 238

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQ- 376
           G  G TLFEELG YY+GP+DGHN++ L+ +LQ V      GP L+HVVT++ +     + 
Sbjct: 239 G--GGTLFEELGFYYVGPIDGHNLDHLLPILQNVRD-ADAGPFLIHVVTQKGKGYAPAEA 295

Query: 377 ---KSEAIEK-----QQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGM 428
              K  A+ K       +  + SN       + +Y + F  +LV EA+KD  IV + A M
Sbjct: 296 AADKYHAVVKFDIATGTQAKTKSN-------APSYQNVFGASLVKEAQKDDKIVGITAAM 348

Query: 429 EMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVND 488
                + +F++ FP+R FDVG+AEQHAVTF+AGLA  G KPFC I S FLQR YDQ+V+D
Sbjct: 349 PSGTGIDIFEKAFPKRTFDVGIAEQHAVTFAAGLATEGFKPFCAIYSTFLQRGYDQIVHD 408

Query: 489 VDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVAS 548
           V  Q LPVRF I  AGLVG+DG T  G+FD  ++ CLPN ++MA SDE ELV MVAT  +
Sbjct: 409 VAIQNLPVRFAIDRAGLVGADGATHAGSFDNAYLGCLPNFVIMAASDEAELVHMVATQVA 468

Query: 549 IDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARAL 608
           I+D P   RYPRG     ++P   GIP+EIGKG+V+ +G  +ALL +G  +  C KA   
Sbjct: 469 INDAPSAVRYPRGEGRGVEMPEV-GIPLEIGKGRVVRQGNKIALLSFGTRLAECEKAADE 527

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLD 668
           L+ LG+  TVADARF KPLD++LV +L + H  LITVEEGSIGGFGSHV   +A  G+LD
Sbjct: 528 LATLGLSTTVADARFMKPLDVELVLKLAREHEVLITVEEGSIGGFGSHVMQTLAEHGMLD 587

Query: 669 SGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTR 714
             V+ R +VLPD +++H +P    A AGL    I       LG+ +
Sbjct: 588 GEVRMRSLVLPDEFMDHDTPAVMYARAGLDAKGIVKKVFEALGKDK 633


>gi|402772875|ref|YP_006592412.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylocystis sp. SC2]
 gi|401774895|emb|CCJ07761.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylocystis sp. SC2]
          Length = 642

 Score =  592 bits (1526), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 320/649 (49%), Positives = 411/649 (63%), Gaps = 21/649 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD + +P  L+ L   ELKQ+A ++R E    VS T   L + L  VELTVALH+VF
Sbjct: 6   TPLLDRIASPEDLRKLRPNELKQVAEDLRRETIDAVSVTGGHLGAGLGVVELTVALHYVF 65

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P DK++WDVG QTY HKILTGRR  I TLR   G+SG+T R+ESEYD F AGH   S+
Sbjct: 66  DTPRDKVIWDVGHQTYPHKILTGRRDRIRTLRMGGGLSGFTKRAESEYDAFGAGHSSTSI 125

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVARD+      +V VI + +  AG AYEA++NAG L S +IVILND+  S+ P
Sbjct: 126 SAGLGMAVARDLADGDNHVVAVIGDSSMSAGMAYEALNNAGALHSRLIVILNDNDMSIAP 185

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S+ L+R+ S  ++R +RE A+ +   + R +++ A K +E++R  I 
Sbjct: 186 --------PTGAMSAYLARLVSGGAYRSIREAARQLASHLPRFIYDKARKAEEFSRSFI- 236

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR----RAED 374
             G T+FEELG YY+GP+DGHN++ L+ VL+ V      GPVLVHVVT++ +      E 
Sbjct: 237 -TGGTMFEELGFYYVGPIDGHNLDHLLPVLKNVRDKDD-GPVLVHVVTQKGKGFGPAEES 294

Query: 375 TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
             K  A+ K  + A+     P  N + TY + F +ALV EAE D  IV + A M     L
Sbjct: 295 ADKCHAVNKF-DVATGVQIKPKAN-APTYTNIFAKALVAEAEHDDKIVAITAAMPSGTGL 352

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
            +F + FP R FDV +AEQHAVTF+AGLAC G KPFC + S FLQR YDQVV+DV  Q L
Sbjct: 353 DIFGKAFPHRTFDVAIAEQHAVTFAAGLACEGYKPFCALYSTFLQRGYDQVVHDVAIQNL 412

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PVRF I  AGLVG+DGPT  GAFD+ ++ CLP  ++MAPSDE EL+ MVAT A+ DD P 
Sbjct: 413 PVRFAIDRAGLVGADGPTHAGAFDLAYLGCLPGFVIMAPSDEAELMHMVATAAAYDDGPS 472

Query: 555 CFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGI 614
            FRYPRG  +  D+P  RG  +EIGKG++L EG  VA+L  G  + + LKA A L   G+
Sbjct: 473 AFRYPRGEGLGVDVP-ERGDILEIGKGRILREGSKVAILSLGTRLADSLKAAAELESYGV 531

Query: 615 DVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLD---SGV 671
             TVADARF KP+D  L+R L  NH  LI VEEGSIGGFG+ V   ++ DGLLD      
Sbjct: 532 STTVADARFAKPIDRDLLRRLAANHEALIVVEEGSIGGFGAQVFQALSEDGLLDGVRGAF 591

Query: 672 KWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLLM 720
           K+R + LPD YI+H      +A A L    I   AL LLG  + A  +M
Sbjct: 592 KFRSMTLPDAYIDHDKHELMIAKAMLDSKAIIGKALELLGDEKAAARVM 640


>gi|414163311|ref|ZP_11419558.1| 1-deoxy-D-xylulose-5-phosphate synthase [Afipia felis ATCC 53690]
 gi|410881091|gb|EKS28931.1| 1-deoxy-D-xylulose-5-phosphate synthase [Afipia felis ATCC 53690]
          Length = 638

 Score =  592 bits (1526), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 309/645 (47%), Positives = 414/645 (64%), Gaps = 32/645 (4%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD +  P +L++LT ++L Q+A E+R E+   VS T   L + L  VELTVALH+VF
Sbjct: 7   TPLLDTIPTPDKLRALTPEQLPQVADELRREMVDAVSVTGGHLGAGLGVVELTVALHYVF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+I+WDVG Q Y HKILTGRR  I TLR+  G+SG+  R+ESEYD F   H   S+
Sbjct: 67  NTPDDRIIWDVGHQAYPHKILTGRRDRIRTLRQGGGLSGFPKRAESEYDAFGTAHSSTSI 126

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVARD++     ++ VI +G+  AG AYEAM+NAG L+S +IVILND+  S+ P
Sbjct: 127 SAGLGMAVARDLQQGNNNVIAVIGDGSMSAGMAYEAMNNAGALNSRLIVILNDNDMSIAP 186

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                    + A+S+ L+R+ SS+++   RE+ K +  R+ +   +   + +EYARGM+ 
Sbjct: 187 --------PVGAMSAYLARLISSETYGTAREILKNIAHRMPKFFQDRTLRAEEYARGMVA 238

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G  LFEELG++Y+GP+DGHN++ L+ VL  V   G+ GPVL+HVVT++ +     ++S
Sbjct: 239 --GGMLFEELGMFYVGPIDGHNLDHLLPVLTNVRDNGT-GPVLIHVVTKKGKGYAPAEES 295

Query: 379 E-----------AIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAG 427
           +           A  KQ +  S++ S         Y   F  +L  EA+KD  IV +   
Sbjct: 296 DDKYHGVVKFDVATGKQFKTKSNAPS---------YTSVFGNSLTKEAQKDDKIVAITGA 346

Query: 428 MEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVN 487
           M     + +F + FPER FDVG+AEQHAVTF+AGLA  G KPFC + S FLQR YDQVV+
Sbjct: 347 MPGGTGVDIFAKSFPERTFDVGIAEQHAVTFAAGLATEGYKPFCALYSTFLQRGYDQVVH 406

Query: 488 DVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVA 547
           DV  Q LPVRF I  AGLVG+DGPT  G+FD T++ CLPN+I+MA  DE +LV MVAT  
Sbjct: 407 DVAIQNLPVRFAIDRAGLVGADGPTHAGSFDNTYLGCLPNLIIMAAGDEADLVHMVATQV 466

Query: 548 SIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARA 607
           +ID+ P   RYPRG  +  +LP   G+P+EIGKG+VL +G  VAL  +G  +  CLKA  
Sbjct: 467 AIDNAPSALRYPRGEGLGLELPDV-GVPLEIGKGRVLRQGTKVALFSFGTRLGECLKAAD 525

Query: 608 LLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLL 667
            L   G+  TVADARF KPLDI+L  +L ++H  LITVEEGSIGGFG+HV   +A  G L
Sbjct: 526 ELEAQGLSTTVADARFLKPLDIELTLKLARSHEVLITVEEGSIGGFGTHVIQALADHGAL 585

Query: 668 DSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
           D G+K R +VLPD +I+  SP +    AGL    I A     LG+
Sbjct: 586 DKGLKIRSMVLPDIFIDQDSPAKMYEQAGLDAKAIVAKVFEALGK 630


>gi|395785879|ref|ZP_10465607.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella tamiae Th239]
 gi|423717226|ref|ZP_17691416.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella tamiae Th307]
 gi|395424337|gb|EJF90524.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella tamiae Th239]
 gi|395427441|gb|EJF93532.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella tamiae Th307]
          Length = 640

 Score =  591 bits (1524), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 315/640 (49%), Positives = 409/640 (63%), Gaps = 21/640 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V+NP  L+ +    L  LA E+R+E   +VS T   L + L  VELTVALH+VF
Sbjct: 6   TPLLDSVKNPRDLREMDESHLSALAEELRAETIDVVSVTGGHLGAGLGVVELTVALHYVF 65

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+I+WDVG QTY HKILTGRR  I TLR+  G+SG+T RSES YDPF AGH   S+
Sbjct: 66  NTPEDRIIWDVGHQTYPHKILTGRRDQIRTLRQAGGLSGFTKRSESIYDPFGAGHSSTSI 125

Query: 199 SAGLGMAVARDIKGK-RECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLH 257
           SAGLGMAVA  ++   +  ++ VI +G+  AG AYEAM+NAG LD+ +IVILND+  S+ 
Sbjct: 126 SAGLGMAVASALENNTQRNVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIA 185

Query: 258 PKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMI 317
           P           A+S+ L+R+ SS ++R LRE AK +TK++ +   + A + +EYARG +
Sbjct: 186 P--------PTGAMSAYLARLVSSPAYRTLRERAKALTKKLPKFFWDKAKRSEEYARGFL 237

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQK 377
              G TLFEELG YYIGPVDGHN++ L+ VL+ V    + GPVLVHVVT + +       
Sbjct: 238 --TGGTLFEELGFYYIGPVDGHNLDHLLPVLKNVREHPN-GPVLVHVVTHKGK---GYAP 291

Query: 378 SEAIEKQQEGAS-----DSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
           +EA   +  G +         +   + + +Y   F +AL+ EA  D+ IV + A M    
Sbjct: 292 AEAASDKYHGVNRFDIVTGKQVKANSNAPSYTKIFAKALIEEARHDEKIVGITAAMPTGT 351

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            L  F E FP R FDVG+AEQHAVTF+AG+A  G KPF  I S FLQR YDQ+V+DV  Q
Sbjct: 352 GLDAFGEVFPARMFDVGIAEQHAVTFAAGMASEGYKPFVAIYSTFLQRGYDQIVHDVSIQ 411

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
            LPVRF I  AG VG+DG T  G+FD  F++ LP  +VMAPSDE EL+ MV T A+ D  
Sbjct: 412 NLPVRFAIDRAGFVGADGATHAGSFDTGFLTALPGFVVMAPSDEVELMHMVRTAAAYDKG 471

Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
           P+ FRYPRG  V  +LP  RG  +EIGKG++L +G  VAL+G+G  +Q  L A   L   
Sbjct: 472 PISFRYPRGEGVGIELP-ERGELLEIGKGRILKQGTKVALIGFGTRLQEALLAGEELGAA 530

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 672
           G+  TVADARF KPLD  L+R L QNH  LIT+EEG+ GGFG+ V  F+A DGLLD G+K
Sbjct: 531 GLSTTVADARFAKPLDEDLIRRLAQNHEVLITIEEGASGGFGAQVLQFLAQDGLLDKGLK 590

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
            R + LPD+Y++H      LA  GL  + I     + LGR
Sbjct: 591 IRSLTLPDDYLQHGPQEMVLAQIGLDRYGIIQAVFAALGR 630


>gi|92116388|ref|YP_576117.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrobacter hamburgensis
           X14]
 gi|118595592|sp|Q1QQ40.1|DXS_NITHX RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|91799282|gb|ABE61657.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrobacter hamburgensis
           X14]
          Length = 668

 Score =  591 bits (1523), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 305/655 (46%), Positives = 419/655 (63%), Gaps = 23/655 (3%)

Query: 67  PDIDDF---FWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKS 123
           PD+ ++     D   TP+LD +  P  L+ L +++L+Q+A E+R E    VS T     +
Sbjct: 18  PDMQNWNVAVTDFSKTPLLDTIRTPADLRKLRVEQLRQVADELRKETIDAVSVTGGHFGA 77

Query: 124 SLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSE 183
            L  VELT A+H++F  P D+++WDVG Q Y HKILTGRR  I TLR   G+SG+T R+E
Sbjct: 78  GLGVVELTTAIHYIFDTPRDRLIWDVGHQAYPHKILTGRRDRIRTLRTGGGLSGFTKRTE 137

Query: 184 SEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDS 243
           S+YDPF A H   S+SA LGMAVARD+ G +  ++ VI +G   AG AYEAM+NAG ++S
Sbjct: 138 SDYDPFGAAHSSTSISASLGMAVARDLSGGKNNVIAVIGDGAMSAGMAYEAMNNAGAMNS 197

Query: 244 NMIVILNDSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMH 303
            +IVILND+  S+ P         + A+S+ LSR+ S K++R LRE AK + K + + + 
Sbjct: 198 RLIVILNDNDMSIAP--------PVGAMSAYLSRLYSGKTYRSLREAAKQLGKHLPKMIA 249

Query: 304 EWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVH 363
           + A +V+EY+RG +   G TLFEELG YY+GP+DGHN++ L+ VL+ V  + + GP+L+H
Sbjct: 250 DRAERVEEYSRGFMVNSG-TLFEELGFYYVGPIDGHNLDHLLPVLKNVRDMEN-GPILLH 307

Query: 364 VVTEENR-----RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKD 418
           VVT++ +      A   +    ++      + S S P    +  Y + F ++LV EAEKD
Sbjct: 308 VVTQKGKGYGPAEAAADKYHAVVKFDVSTGAQSKSKP---NAPAYQNVFGQSLVKEAEKD 364

Query: 419 KDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFL 478
             I+ + A M     + +F + FP+R FDVG+AEQHAVTF+AGLA  G KPFC I S FL
Sbjct: 365 DKIIAITAAMPSGTGVDIFNKAFPKRTFDVGIAEQHAVTFAAGLATEGFKPFCAIYSTFL 424

Query: 479 QRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDE 538
           QR YDQ+V+DV  Q LPVRF I  AGLVG+DG T  G+FD  ++ CLPN ++MA SDE E
Sbjct: 425 QRGYDQIVHDVAIQSLPVRFAIDRAGLVGADGATHAGSFDNAYLGCLPNFVIMAASDEAE 484

Query: 539 LVDMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAM 598
           LV MVAT  +I+DRP   RYPRG     ++P   G+P+ IGKG+++ +G  VALL  G  
Sbjct: 485 LVHMVATQVAINDRPSAVRYPRGEGRGVEMPEV-GVPLPIGKGRIVRQGSKVALLSLGTR 543

Query: 599 VQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVS 658
           +  C KA   L+  G+  T+ADARF KPLD+ LV +L ++H  LIT+EEGSIGGFGSHV 
Sbjct: 544 LAECEKAADELAAHGLSTTIADARFMKPLDVDLVLKLARDHDVLITIEEGSIGGFGSHVM 603

Query: 659 HFIALDGLLDSG-VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
             +A  G LDSG V+ R +VLPD +++H +P    A  GL    I A     LG+
Sbjct: 604 QTLAEHGALDSGQVRVRAMVLPDEFLDHDTPNAMYASVGLDDRGIVAKVFEALGK 658


>gi|299134745|ref|ZP_07027937.1| deoxyxylulose-5-phosphate synthase [Afipia sp. 1NLS2]
 gi|298590555|gb|EFI50758.1| deoxyxylulose-5-phosphate synthase [Afipia sp. 1NLS2]
          Length = 638

 Score =  591 bits (1523), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 309/645 (47%), Positives = 413/645 (64%), Gaps = 32/645 (4%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD +  P +L++L+ ++L Q+A E+R E+   VS T   L + L  VELTVALH+VF
Sbjct: 7   TPLLDTIPTPDKLRALSPEQLPQVADELRREMVDAVSVTGGHLGAGLGVVELTVALHYVF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+I+WDVG Q Y HKILTGRR  I TLR+  G+SG+  R+ESEYD F   H   S+
Sbjct: 67  NTPDDRIIWDVGHQAYPHKILTGRRDRIRTLRQGGGLSGFPKRAESEYDAFGTAHSSTSI 126

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVARD++     ++ VI +G+  AG AYEAM+NAG L+S +IVILND+  S+ P
Sbjct: 127 SAGLGMAVARDLQQGNNNVIAVIGDGSMSAGMAYEAMNNAGALNSRLIVILNDNDMSIAP 186

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                    + A+S+ L+R+ SS+++   RE+ K +  R+ +   +   + +EYARGM+ 
Sbjct: 187 --------PVGAMSAYLARLISSQTYGTAREILKNIAHRMPKFFEDRTLRAEEYARGMVA 238

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G  LFEELG++Y+GP+DGHN++ L+ VL  V   G+ GPVL+HVVT++ +     ++S
Sbjct: 239 --GGMLFEELGMFYVGPIDGHNLDHLLPVLTNVRDNGT-GPVLIHVVTKKGKGYAPAEES 295

Query: 379 E-----------AIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAG 427
           +           A  KQ +  S++ S         Y   F  +L  EA+KD  IV +   
Sbjct: 296 DDRYHGVVKFDVATGKQFKTKSNAPS---------YTSVFGNSLTKEAQKDDKIVAITGA 346

Query: 428 MEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVN 487
           M     + +F + FPER FDVG+AEQHAVTF+AGLA  G KPFC + S FLQR YDQVV+
Sbjct: 347 MPGGTGVDIFAKSFPERTFDVGIAEQHAVTFAAGLATEGYKPFCALYSTFLQRGYDQVVH 406

Query: 488 DVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVA 547
           DV  Q LPVRF I  AGLVG+DGPT  GAFD T++ CLPN+I+MA  DE +LV MVAT  
Sbjct: 407 DVAIQNLPVRFAIDRAGLVGADGPTHAGAFDNTYLGCLPNLIIMAAGDEADLVHMVATQV 466

Query: 548 SIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARA 607
           +ID+ P   RYPRG  +  +LP   G+P+EIGKG+VL EG  VAL  +G  +  CLKA  
Sbjct: 467 AIDNAPSALRYPRGEGLGLELPDV-GVPLEIGKGRVLREGAKVALFSFGTRLGECLKAAD 525

Query: 608 LLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLL 667
            L   G+  TVADARF KPLDI L  +L ++H  LITVEEG+IGGFG+HV   +A  G L
Sbjct: 526 ELESYGLSTTVADARFLKPLDIDLTLKLARSHDVLITVEEGAIGGFGTHVIQALADHGAL 585

Query: 668 DSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
           D GV+ R +VLPD +I+  SP +    AGL    I A     LG+
Sbjct: 586 DKGVRVRSMVLPDIFIDQDSPAKMYEQAGLDAKAIVAKVFEALGK 630


>gi|300023488|ref|YP_003756099.1| deoxyxylulose-5-phosphate synthase [Hyphomicrobium denitrificans
           ATCC 51888]
 gi|299525309|gb|ADJ23778.1| deoxyxylulose-5-phosphate synthase [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 635

 Score =  590 bits (1522), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 309/640 (48%), Positives = 405/640 (63%), Gaps = 22/640 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD +  P  L+ L   +L QLA E+R+E+   VS T   L + L  +ELTVALH +F
Sbjct: 4   TPLLDRIGTPHELRRLAEDQLPQLADELRAEMIDAVSVTGGHLGAGLGVIELTVALHWIF 63

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+++WDVG Q Y HKILTGRR  I TLR+  G+SG+T R ES YDPF A H   S+
Sbjct: 64  NTPEDRLIWDVGHQAYPHKILTGRRDRIRTLRQPGGLSGFTKRDESPYDPFGAAHSSTSI 123

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LGMAVARD+ G    ++ VI +G   AG AYEAM+NAG  +  +IVILND+  S+ P
Sbjct: 124 SAALGMAVARDLSGGSNNVIAVIGDGAMSAGMAYEAMNNAGARNERLIVILNDNDMSIAP 183

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      ALS+ L+R  SS ++  LR+ AK + K + +     AA+V+EY R +  
Sbjct: 184 --------PTGALSAYLARATSSGTYLHLRDYAKQLAKMLPKQWERRAARVEEYTRHIW- 234

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
            QG   FEELG YY+GP+DGH+   L+ VL+ V       P+LVHVVT   ++ +    +
Sbjct: 235 -QGGAWFEELGFYYVGPIDGHDFSQLLPVLKNVRD-AEQAPILVHVVT---KKGKGYAPA 289

Query: 379 EAIEKQQEGASDSNSL------PFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
           EA + +  G +  N +      P  N + +Y   F ++L+ EA KD  IV + A M    
Sbjct: 290 EAADDKYHGVNKFNVVTGAQVKPKPN-APSYTKVFADSLIAEARKDDRIVAITAAMPSGT 348

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            L  F ++FPER FDVG+AEQHAVTF+AGLA  G KPF  I S FLQRAYDQVV+DV  Q
Sbjct: 349 GLDYFGKEFPERTFDVGIAEQHAVTFAAGLATEGYKPFATIYSTFLQRAYDQVVHDVAIQ 408

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
           +LPVRF +  AGLVG+DG T  G+FDI+++ CLP+ ++MA +DE ELV MVAT  +IDDR
Sbjct: 409 KLPVRFALDRAGLVGADGATHAGSFDISYLGCLPDFVIMAAADEAELVHMVATQVAIDDR 468

Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
           P   RYPRG  V  DLP   G+ +EIGKG+++ EG  VALL  G  +  CLKA   L   
Sbjct: 469 PSALRYPRGEGVGVDLP-QTGVALEIGKGRIVREGSKVALLSLGTRLAECLKAADQLQSF 527

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 672
           G+  TVADARF KPLD +L+R+L  NH  L+TVEEGS+GGFGS+V  F++ +GLLD G++
Sbjct: 528 GLSTTVADARFAKPLDTRLIRDLALNHEVLVTVEEGSVGGFGSYVLQFLSDEGLLDRGLR 587

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
            R  VLPD +I+H  P      AGL    I  T  + LGR
Sbjct: 588 VRTKVLPDVFIDHGKPEVMYEDAGLNASGIVKTVFAALGR 627


>gi|430002425|emb|CCF18206.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein [Rhizobium
           sp.]
          Length = 639

 Score =  590 bits (1521), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 306/640 (47%), Positives = 418/640 (65%), Gaps = 22/640 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V+ P  L+ +  ++L QLA E+R E+   VSKT   L + L  VELT+A+H VF
Sbjct: 7   TPLLDAVKFPADLRMIEDRDLPQLAREVRDEMIDAVSKTGGHLGAGLGVVELTIAIHKVF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D++++DVG Q Y HKILTGRR  I TLR+++G+SG+T R+ES+YDPF A H   S+
Sbjct: 67  NTPDDRLIFDVGHQCYPHKILTGRRDRIRTLRQENGLSGFTRRAESDYDPFGAAHSSTSI 126

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVA D+ G +  ++ VI +G   AG AYEA++NAG LD+ +IVILND+  S+ P
Sbjct: 127 SAGLGMAVAADLSGSKRHVIAVIGDGAMSAGMAYEALNNAGALDARLIVILNDNDMSIAP 186

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S+ L+R+ S +++  +RE+ K +T  +G+G      +  E+ARG + 
Sbjct: 187 --------PTGAMSAYLARLASGRTYMGVREIGKKLTAYLGKGFDRAITRAVEHARGYV- 237

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G T+FEE+G Y+IGP+DGH+ E L+ VL+ V   G  GPVL+HV T++ +       +
Sbjct: 238 -TGGTMFEEMGFYHIGPIDGHSFEHLLPVLRNVRDNGQ-GPVLIHVCTQKGK---GYPPA 292

Query: 379 EAIEKQQEGASDSNSLPFGNYSR------TYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
           EA   +  G +  + +  G  ++      +Y   F E+LV EA  D+ IV + A M    
Sbjct: 293 EAAADKYHGVNKFDVIT-GTQAKAKPNAPSYTSVFGESLVQEARFDEKIVGITAAMPNGT 351

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            +    E FP R FDVG+AEQHAVTF+AGLA  G KPFC + S FLQR YDQVV+DV  Q
Sbjct: 352 GIDKLAEVFPSRTFDVGIAEQHAVTFAAGLAAEGFKPFCALYSTFLQRGYDQVVHDVAIQ 411

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
            LPVRF I  AG VG+DGPT  G+FD TF++ LP M+VMA +DE EL  MV T A+ D+ 
Sbjct: 412 GLPVRFPIDRAGFVGADGPTHAGSFDTTFLATLPGMVVMAAADEAELKHMVRTAAAYDEG 471

Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
           P+ FRYPRG  V  +LP  RG  +EIGKG+++ EG  VALL +G  +++CL A   L   
Sbjct: 472 PISFRYPRGEGVGVELP-ERGQILEIGKGRIVKEGSKVALLSFGTRLKDCLLAAEDLDAA 530

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 672
           G+  TVADARF KPLD  L+R+L ++H  LIT+EEG++GGFG+HV HF+A +GLLD G+K
Sbjct: 531 GLSTTVADARFAKPLDHDLIRQLARHHDVLITIEEGALGGFGAHVLHFLATEGLLDQGLK 590

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
            RP+VLPD ++E ASP    A AGL    I  T  + LG+
Sbjct: 591 VRPMVLPDVWMEQASPDAMYAKAGLDRAGIVTTVFNALGQ 630


>gi|254501985|ref|ZP_05114136.1| 1-deoxy-D-xylulose-5-phosphate synthase [Labrenzia alexandrii
           DFL-11]
 gi|222438056|gb|EEE44735.1| 1-deoxy-D-xylulose-5-phosphate synthase [Labrenzia alexandrii
           DFL-11]
          Length = 631

 Score =  588 bits (1517), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 311/634 (49%), Positives = 404/634 (63%), Gaps = 16/634 (2%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +LD V +P  L+ L   EL QLA E+R+E    VS T   L + L  VELTVALH+VF+ 
Sbjct: 1   MLDQVSSPAELRQLDEAELGQLAEELRTETIDTVSITGGHLGAGLGVVELTVALHYVFNT 60

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+I+WDVG Q+Y HKILT RR  I TLR+  G+SG+T RSES YDPF   H   S+SA
Sbjct: 61  PDDRIIWDVGHQSYPHKILTERRDRIRTLRQPGGLSGFTKRSESIYDPFGTAHSSTSISA 120

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKI 260
           GLGMA ARD+K     ++ VI +G   AG AYEAM+NAG+L S ++VILND+  S+ P +
Sbjct: 121 GLGMAAARDLKDGDNNVIAVIGDGAMSAGMAYEAMNNAGHLGSRLVVILNDNDMSIAPPV 180

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQ 320
                    A+S+ L+++ S  +++ LR  AK + K   + + E AA+ +EYARG     
Sbjct: 181 --------GAMSAYLAKLVSGPTYQSLRGAAKSIVKNFPKQLAEKAARAEEYARGFW--T 230

Query: 321 GSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRR---AEDTQK 377
           G TLFEELG YY+GPVDGHN+E L+ +L+ V    + GPVL+H VT++ +    AE  + 
Sbjct: 231 GGTLFEELGFYYVGPVDGHNLEHLLPILKNVRDTHN-GPVLIHAVTQKGKGYAPAEGAKD 289

Query: 378 SEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLF 437
                 + +  +   S P  N + +Y + F  +L+ EAE+D+ +V + A M     L LF
Sbjct: 290 KYHGVAKFDVVTGKQSKPKAN-APSYTNVFATSLIREAEEDEKVVAITAAMPDGTGLNLF 348

Query: 438 QEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVR 497
            E FPER +DVG+AEQHAVTF+AG+A  G KPF  I S FLQRAYDQV++DV  Q LPVR
Sbjct: 349 GEAFPERTYDVGIAEQHAVTFAAGMATEGYKPFAAIYSTFLQRAYDQVIHDVALQGLPVR 408

Query: 498 FVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFR 557
           F I  AGLVG+DG T  GAFD  ++SCLP  +VMA SDE EL  MVAT  + D+ P+ FR
Sbjct: 409 FPIDRAGLVGADGATHAGAFDTAYLSCLPGFVVMAASDEAELRHMVATAVAYDEGPISFR 468

Query: 558 YPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVT 617
           YPRG  V  D+P  RG  +EIGKG V  EG  VALL +G  +  CLKA   L   G+  T
Sbjct: 469 YPRGEGVGLDMP-ERGTVLEIGKGIVRREGTKVALLSFGGRMAECLKAADELDAAGLSTT 527

Query: 618 VADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWRPIV 677
           VADARF KPLD+ L+R L + H  L+T+EEGS+GGFGSHV   +A +G LD+G+K R + 
Sbjct: 528 VADARFAKPLDMDLIRRLAREHEVLVTIEEGSVGGFGSHVLSALAQEGALDAGLKIRTLT 587

Query: 678 LPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
           LPD Y +H  P    A AGL    I  T  + LG
Sbjct: 588 LPDTYQDHDKPASMYASAGLDKEGILTTVFTALG 621


>gi|158424735|ref|YP_001526027.1| 1-deoxy-D-xylulose-5-phosphate synthase [Azorhizobium caulinodans
           ORS 571]
 gi|172047993|sp|A8IBS1.1|DXS_AZOC5 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|158331624|dbj|BAF89109.1| deoxyxylulose-5-phosphate synthase [Azorhizobium caulinodans ORS
           571]
          Length = 641

 Score =  588 bits (1517), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 306/637 (48%), Positives = 407/637 (63%), Gaps = 20/637 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V +   ++ L  ++L QLA E+R+E  S VS T   L + L  VELTVALHHVF
Sbjct: 6   TPLLDTVRDASDVRRLPEEKLSQLADELRAETISAVSVTGGHLGAGLGVVELTVALHHVF 65

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+++WDVG Q Y HKILTGRR  I TLR+  G+SG+T RSESEYDPF A H   S+
Sbjct: 66  NTPHDRLIWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTRRSESEYDPFGAAHSSTSI 125

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVARD+ G    ++ VI +G   AG AYEAM+NAG +DS +IVILND+  S+ P
Sbjct: 126 SAGLGMAVARDLSGGDRNVIAVIGDGAMSAGMAYEAMNNAGAMDSRLIVILNDNDMSIAP 185

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S+ L+R+ S +++  LRE+ K +   + + + + AAK +E+ARG   
Sbjct: 186 --------PTGAMSAYLARLISGRTYLSLREIGKQLAGHLPKFVKDGAAKAEEFARGFW- 236

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G TLFEE+G YY+GP+DGHN+E L+ VL+ V      GP+LVHVVT++ +       +
Sbjct: 237 -TGGTLFEEMGFYYVGPIDGHNLEHLLPVLKNVRD-AKTGPILVHVVTQKGK---GYPPA 291

Query: 379 EAIEKQQEGASDSN-----SLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
           EA   +  G    +      +   + + +Y   F E L+ EA +D  +V + A M     
Sbjct: 292 EASADKYHGVVKFDVVTGAQVKAKSNAPSYTRVFAETLIDEARRDDKVVAITAAMPSGTG 351

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L LF + FP+R FDVG+AEQHAVTF+AGLA  G +PFC + S FLQR YDQVV+DV  Q 
Sbjct: 352 LDLFGQAFPQRTFDVGIAEQHAVTFAAGLAAEGYRPFCALYSTFLQRGYDQVVHDVALQG 411

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPVRF I  AGLVG+DG T  GAFD+  ++CLP   VMAP+DE EL  M+AT    D  P
Sbjct: 412 LPVRFAIDRAGLVGADGATHAGAFDLAMLTCLPGFTVMAPADEAELTHMIATAVGHDAGP 471

Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
           + FR+PRG  V  + P  +G  + IGKG+V+ EG+D+A L  G  +  CL     LS LG
Sbjct: 472 IAFRFPRGEGVGVERP-EKGERLPIGKGRVVREGQDIAFLSLGTRLAACLDVAERLSSLG 530

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKW 673
           I  TVADARF KP+D +L+  L + H  L+ VEEGS+GGFGS V  F++ +GL+D G+K 
Sbjct: 531 ISATVADARFAKPIDRELIAHLARTHAALVVVEEGSVGGFGSQVLQFLSDEGLMDGGLKV 590

Query: 674 RPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
           R + LPD YI+H +P  QLA AGL    I   AL+L+
Sbjct: 591 RALTLPDTYIDHDTPAAQLAEAGLDADGIYKRALALV 627


>gi|304393478|ref|ZP_07375406.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ahrensia sp. R2A130]
 gi|303294485|gb|EFL88857.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ahrensia sp. R2A130]
          Length = 637

 Score =  588 bits (1517), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 312/645 (48%), Positives = 413/645 (64%), Gaps = 19/645 (2%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V  P  L+ L+ ++L QLA E+RSE+   VS T   L + L  VEL+VALH VF
Sbjct: 5   TPLLDQVHIPADLRKLSDEQLPQLADELRSEMVDAVSVTGGHLGAGLGVVELSVALHSVF 64

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+I+WDVG Q Y HKILTGRR  I TLR + G+SG+T R+ESEYDPF A H   S+
Sbjct: 65  DTPHDRIIWDVGHQCYPHKILTGRRDRIRTLRTETGLSGFTKRAESEYDPFGAAHSSTSI 124

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMA A  + G    +V+VI +G+  AG AYEAM+NAG +D+  IVILND+  S+ P
Sbjct: 125 SAGLGMAEASKLAGVHRNVVSVIGDGSITAGMAYEAMNNAGGIDARQIVILNDNDMSIAP 184

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S  L+R+ S K++R LRE AK + +++ + + + A K +EY R +  
Sbjct: 185 P--------TGAMSHYLARLVSGKTYRSLRETAKQLNEKLPKFIADKARKAEEYTRNVFN 236

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQ-- 376
            QG T+FEELG YY+GP+DGH++  L+ VL+ V    S GP+LVHV+TE+ +     +  
Sbjct: 237 EQG-TMFEELGFYYVGPIDGHDLSVLLPVLRNVRDAKS-GPILVHVITEKGKGYGPAEAA 294

Query: 377 --KSEAIEK-QQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
             K  A+ K        S S+P    + +Y   F ++LV EAE D  IV + A M     
Sbjct: 295 GDKLHAVAKFNVVTGEQSKSIP---NAPSYTKVFGQSLVQEAENDPKIVGISAAMPGGTG 351

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           + +F E FPER +DVG+AEQHAVTF+AG+A  G KPFC I S FLQR YDQVV+DV  Q 
Sbjct: 352 IDIFGEAFPERTYDVGIAEQHAVTFAAGMASEGYKPFCAIYSTFLQRGYDQVVHDVSIQN 411

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPVRF I  AG VG+DG T  G+FDI +++CLP   VMA +DE EL  MVAT  + DD P
Sbjct: 412 LPVRFPIDRAGFVGADGATHAGSFDIAYLACLPGFTVMAAADEAELKHMVATAVAYDDGP 471

Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
           + FRYPRG  V  DLP  RG  +EIGKG++  EG  +ALL +G+   +C+ A   L + G
Sbjct: 472 LSFRYPRGEGVGVDLP-ERGSVLEIGKGRITKEGTKIALLSFGSRHADCMAAAEELEEYG 530

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKW 673
           +  TVADARF KPLD  L+  L +NH  LITVEEGS+GGFG+ V H +A  GLLD+G+K 
Sbjct: 531 LSTTVADARFAKPLDTDLIERLARNHEVLITVEEGSVGGFGAMVLHHLAGSGLLDNGLKI 590

Query: 674 RPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALL 718
           R + +PD Y++  SP + + +AGL    I  T  + LG  ++A L
Sbjct: 591 RTMTMPDVYLDQMSPARMIEVAGLDQAGIVKTVFAALGTEQDAAL 635


>gi|407775204|ref|ZP_11122499.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thalassospira
           profundimaris WP0211]
 gi|407281629|gb|EKF07190.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thalassospira
           profundimaris WP0211]
          Length = 639

 Score =  588 bits (1515), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 303/637 (47%), Positives = 409/637 (64%), Gaps = 16/637 (2%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD +  P  L+ L   ++KQ+A E+R+E+   VS T   L + L  VELTVA+H++F
Sbjct: 7   TPLLDTINTPEELRKLQPAQMKQVADELRAEVIDAVSVTGGHLGAGLGVVELTVAIHYLF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR  I T+R+  G+SG+T RSESEYDPF AGH   S+
Sbjct: 67  DTPYDRLIWDVGHQCYPHKILTGRRDRIRTIRQGGGLSGFTKRSESEYDPFGAGHSSTSI 126

Query: 199 SAGLGMAVARDIKG-KRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLH 257
           SAGLGMAVA  +   KR+ ++ VI +G+  AG AYEAM+NA   D  +IVILND+  S+ 
Sbjct: 127 SAGLGMAVANQLSDDKRKNVIAVIGDGSMSAGMAYEAMNNAAATDQRLIVILNDNDMSIA 186

Query: 258 PKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMI 317
           P         + ++S  LSR+ S K ++ LR  AKG+TK + R + E A K++EY RGM+
Sbjct: 187 P--------PVGSMSGYLSRLISGKGYQGLRNAAKGLTKHLPRQIEEAARKLEEYTRGMV 238

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRR---AED 374
              G TLFEE+G +Y+GP+DGHN++ L+ VL+ V      GP+L+H VT++ +    AE+
Sbjct: 239 --TGGTLFEEMGFFYVGPIDGHNMDHLLPVLKNVRDADVDGPILIHAVTQKGKGYGPAEN 296

Query: 375 TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
                    + +  +   + P  N + +Y   + E LV  AEKD+ +  + A M     +
Sbjct: 297 AADKYHGVAKFDVVTGKQAKPTPN-APSYTKVYGETLVKLAEKDEKVTAITAAMPSGTGV 355

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
            +F + FP+R FDVG+AEQHAVTF+AG+AC G KPFC + S FLQR YDQVV+DV  Q L
Sbjct: 356 NIFADHFPDRAFDVGIAEQHAVTFAAGMACEGYKPFCTLYSTFLQRGYDQVVHDVAIQNL 415

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PVRF +  AGLVG+DG T  GA+DI ++ CLPN ++MA +DE ELV M  T  +IDDRP 
Sbjct: 416 PVRFAMDRAGLVGADGATHAGAYDIAYLGCLPNFVLMAAADEAELVHMTTTAWAIDDRPS 475

Query: 555 CFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGI 614
            FRYPRG  V  ++P   G  +EIGKG++L EG  +A+L YG  +   L A   L+  G+
Sbjct: 476 AFRYPRGEGVGVEMPA-EGKVLEIGKGRILREGGKIAILSYGTRLAEALIAAEDLAARGL 534

Query: 615 DVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWR 674
             TVADARF KPLD +L+ +L +NH  LIT+EEGSI GFG+ V   +A  GLLD+G+K R
Sbjct: 535 PATVADARFAKPLDHELIADLARNHEVLITIEEGSINGFGAMVLQHMAGHGLLDNGLKIR 594

Query: 675 PIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
            + LPD  I+H  P  Q   AGL    I  TAL  LG
Sbjct: 595 TMALPDALIDHDKPEIQYEKAGLDAKAIVKTALGALG 631


>gi|395791326|ref|ZP_10470784.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella alsatica IBS
           382]
 gi|395408689|gb|EJF75299.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella alsatica IBS
           382]
          Length = 640

 Score =  588 bits (1515), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 317/645 (49%), Positives = 411/645 (63%), Gaps = 31/645 (4%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD +  P  L++L   +L +LA E+R+E    VS T   L + L  VELTVALH+VF
Sbjct: 6   TPLLDRIFLPHDLRALPESDLVRLAAELRTETIDAVSVTGGHLGAGLGVVELTVALHYVF 65

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+I+WDVG Q Y HKILTGRR  I TLR++ G+SG+T RSES YDPF AGH   S+
Sbjct: 66  NTPEDRIIWDVGHQAYPHKILTGRRDQIRTLRQEGGLSGFTKRSESVYDPFGAGHSSTSI 125

Query: 199 SAGLGMAVARDIKGK-RECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLH 257
           SAGLGMAVA  +K + R  I+ VI +G   AG AYEAM+NAG LD+ +I++LND+  S+ 
Sbjct: 126 SAGLGMAVASALKQEERRNIIAVIGDGAMSAGMAYEAMNNAGALDARLIIVLNDNDMSIA 185

Query: 258 PKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMI 317
           P           A+S+ L+R+ S  ++R LRE  K ++K++ +   E A + +E+ARG++
Sbjct: 186 P--------PTGAMSAHLARLVSRPAYRSLRERVKVLSKKLPKFFLEKARRSEEFARGLL 237

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR------- 370
              G TLFEELG YY+GP+DGHN+  L+ VL+ V    S GPVLVHVVT + +       
Sbjct: 238 --VGGTLFEELGFYYVGPIDGHNLRHLLPVLKNVREYPS-GPVLVHVVTHKGKGYAPAEA 294

Query: 371 ---RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAG 427
              +     + + I  QQ  A  SN+LP       Y   F +AL+ EA  D  IV + A 
Sbjct: 295 SSDKYHGVNRFDIITGQQVKAP-SNALP-------YTKVFSKALIEEAVHDDKIVSITAA 346

Query: 428 MEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVN 487
           M     L  F EKFPER FDVG+AEQHAVTF+AG+AC G KPF  I S FLQRAYDQ+++
Sbjct: 347 MPTGTGLDAFAEKFPERMFDVGIAEQHAVTFAAGIACEGYKPFVAIYSTFLQRAYDQIIH 406

Query: 488 DVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVA 547
           DV  QRLPVRF I  AG VG+DG T  G+FDI F+S LP  +VMAPSDE EL+ MV T A
Sbjct: 407 DVSIQRLPVRFAIDRAGFVGADGATHAGSFDIVFLSTLPEFVVMAPSDEVELMHMVRTAA 466

Query: 548 SIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARA 607
           + D  PV FRYPRG  V  DLP  RG  +EIGKG++L EG  +AL+ +G  +   L A  
Sbjct: 467 AYDQGPVSFRYPRGEGVGMDLP-QRGELLEIGKGRILREGNRIALVCFGTRMSEVLVAAD 525

Query: 608 LLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLL 667
            L   G+  TV DARF KPLD  L+R L + H  LIT+EEG+IGGFG+H+  F+A +GLL
Sbjct: 526 ALGAEGLSTTVVDARFAKPLDKDLMRRLAREHEVLITIEEGAIGGFGAHLLQFLAQEGLL 585

Query: 668 DSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
           + G+K R +  PD Y+ H  P + L+  GL    I  T  + LGR
Sbjct: 586 EHGLKVRTLKFPDEYLNHGLPEKVLSRIGLDAVGIVNTVFTALGR 630


>gi|260431853|ref|ZP_05785824.1| 1-deoxy-D-xylulose-5-phosphate synthase [Silicibacter
           lacuscaerulensis ITI-1157]
 gi|260415681|gb|EEX08940.1| 1-deoxy-D-xylulose-5-phosphate synthase [Silicibacter
           lacuscaerulensis ITI-1157]
          Length = 642

 Score =  588 bits (1515), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 320/652 (49%), Positives = 411/652 (63%), Gaps = 36/652 (5%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           D+  TP+LDLV  P  LK  +  +L QLA E+R+E  S VS T   L + L  VELTVAL
Sbjct: 3   DRPNTPLLDLVNRPADLKQFSDAQLHQLAHELRAETISAVSVTGGHLGAGLGVVELTVAL 62

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H VF  P DKI+WDVG Q Y HKILT RR  I TLR+K G+SG+T RSES YDPF A H 
Sbjct: 63  HAVFDTPRDKIIWDVGHQCYPHKILTERRDRIRTLRQKGGLSGFTKRSESPYDPFGAAHS 122

Query: 195 CNSVSAGLGMAVARDIKG-KRECI---VTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
             S+SA LG AVARD+ G   E +   + VI +G+  AG A+EAM+NAG+L   +IVILN
Sbjct: 123 STSISAALGFAVARDLGGVTPEGLGDAIAVIGDGSMSAGMAFEAMNNAGHLKKRLIVILN 182

Query: 251 DSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVD 310
           D+  S+ P         + ALS+ LSRI + + F  L+  AKG    +     E A +  
Sbjct: 183 DNEMSIAP--------PVGALSNYLSRIYAEEPFHDLKAAAKGAVSLLPEPFREGAKRAK 234

Query: 311 EYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR 370
           E  +GM    G TLFEELG  Y+GP+DGH+++ L+ VL+ V +  + GP+L+H +T++ +
Sbjct: 235 EMLKGMA--VGGTLFEELGFSYVGPIDGHDLDQLLPVLRTVKARAT-GPILIHALTKKGK 291

Query: 371 ----------RAEDTQKSEAIE-KQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDK 419
                     +   T K + +  KQQ+  S++ S         Y   F + LV EA +D 
Sbjct: 292 GYAPAEQARDKGHATAKFDVVTGKQQKAPSNAPS---------YTSVFGKTLVDEASRDD 342

Query: 420 DIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQ 479
            IV V A M     L LF E++P R FDV +AEQH VTFSA LA GGLKPFC + S FLQ
Sbjct: 343 KIVAVTAAMPDGTGLNLFAERYPSRCFDVAIAEQHGVTFSAALAAGGLKPFCAMYSTFLQ 402

Query: 480 RAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDEL 539
           R YDQVV+DV  QRLPVRF I  AGLVG+DG T  G+FDI ++S LP M+VMA +DE EL
Sbjct: 403 RGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGSFDIAYLSNLPGMVVMAAADEAEL 462

Query: 540 VDMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMV 599
           V MVAT A+ DD P+ FRYPRG  V  DLP  RG  +EIGKG+++  G  VALL +G  +
Sbjct: 463 VHMVATAAAHDDGPIAFRYPRGEGVGVDLP-ERGQVLEIGKGRMIQSGARVALLSFGTRL 521

Query: 600 QNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSH 659
               KA   L+  GI  T+ADARF KPLD  L+ +L  NH  LIT+EEG+IGGFGSHV+ 
Sbjct: 522 AEVQKAAESLTARGITPTIADARFAKPLDRDLILDLAANHEALITIEEGAIGGFGSHVAQ 581

Query: 660 FIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
            +A +G+ D G+K+R +VLPD +I+ ASP    A+AG+   HI A  LS+LG
Sbjct: 582 LLADEGVFDRGLKYRSMVLPDIFIDQASPADMYAVAGMNAEHIEAKVLSVLG 633


>gi|395765602|ref|ZP_10446196.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella sp. DB5-6]
 gi|395411156|gb|EJF77690.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella sp. DB5-6]
          Length = 640

 Score =  588 bits (1515), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 309/640 (48%), Positives = 415/640 (64%), Gaps = 21/640 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD +  P  L++L   +L +LA E+RSE   +VS T   L + L  +ELTVALH+VF
Sbjct: 6   TPLLDYICVPQDLRALPESDLVRLANELRSETIDVVSVTGGHLGAGLGVIELTVALHYVF 65

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+I+WDVG Q Y HKILTGRR  I TLR++ G+SG+T RSES YDPF AGH   S+
Sbjct: 66  NTPEDRIIWDVGHQAYPHKILTGRRDKIRTLRQEGGLSGFTKRSESVYDPFGAGHSSTSI 125

Query: 199 SAGLGMAVARDIKGK-RECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLH 257
           SAGLGMA+A  +K + +  I++VI +G   AG AYEAM+NAG LD+ +IVILND+  S+ 
Sbjct: 126 SAGLGMAMASALKAETKRNIISVIGDGAMSAGMAYEAMNNAGALDARLIVILNDNDMSIA 185

Query: 258 PKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMI 317
           P           A+S+ L+R+ S  ++R LRE  K ++K++ +   E A + +E+ARG +
Sbjct: 186 P--------PTGAMSAHLARLVSRPAYRSLRERVKVLSKKLPKFFGEKARRSEEFARGFL 237

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQK 377
              G TLF+ELG YY+GP+DGHN+E L+ VL+ V      GPVLVHVVT + +       
Sbjct: 238 --VGGTLFDELGFYYVGPIDGHNLEHLLPVLKNVREY-PYGPVLVHVVTHKGK---GYAP 291

Query: 378 SEAIEKQQEGASD-----SNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
           +EA   +  G +         +   + S +Y   F +AL+ EA  D  +V + A M    
Sbjct: 292 AEASSDKYHGVNSFDIVTGKQVKIQSKSLSYTKVFSKALIEEASYDDKVVGITAAMPTGT 351

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            L  F EKFPER FDVG+AEQHAVTF+AG+AC G KPF  I S FLQRAYDQ+++DV  Q
Sbjct: 352 GLDAFAEKFPERMFDVGIAEQHAVTFAAGIACEGYKPFVAIYSTFLQRAYDQIIHDVSIQ 411

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
           +LPVRF I  AG VG+DG T  G+FDI F++ LP  +VMAPSDE EL+ MV T A+ D+ 
Sbjct: 412 KLPVRFAIDRAGFVGADGATHAGSFDIVFLTTLPEFVVMAPSDEVELMHMVRTAAAYDEG 471

Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
           P+ FRYPRG  V  DLP  RG  +EIGKG++L EG  +AL+ +G  +   L A ++L   
Sbjct: 472 PLSFRYPRGEGVGMDLP-ERGELLEIGKGRILREGNRIALVCFGTRMSEVLMAASMLEAE 530

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 672
           G+  TVADARF KPLD  L+R L + H  L+T+EEG++GGFG+H+  F A +GLL+ G+K
Sbjct: 531 GLSTTVADARFAKPLDKDLMRRLAREHEVLVTIEEGAMGGFGAHLLQFFAQEGLLEHGLK 590

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
            R + LPD Y+ H SP + L+  GL    I  T  + LGR
Sbjct: 591 VRTLKLPDEYLSHGSPEKVLSRIGLDAVGIINTVFTALGR 630


>gi|217976903|ref|YP_002361050.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylocella silvestris
           BL2]
 gi|217502279|gb|ACK49688.1| deoxyxylulose-5-phosphate synthase [Methylocella silvestris BL2]
          Length = 642

 Score =  587 bits (1514), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 317/646 (49%), Positives = 419/646 (64%), Gaps = 21/646 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD +  P  L+ L   +L ++A ++R E  S VS T   L + L  VELTVALH+VF
Sbjct: 6   TPLLDKIHTPADLRRLPESDLAEVARQLREETISAVSVTGGHLGAGLGVVELTVALHYVF 65

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+++WDVG Q Y HKI+TGRR  I TLR+  G+SG+T RSESEYDPF A H   S+
Sbjct: 66  NTPDDRLIWDVGHQAYPHKIITGRRDRIRTLRRGGGLSGFTRRSESEYDPFGAAHSSTSI 125

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVA  + G+   ++ VI +G   AG AYEAM+NAG + S +I+ILND+  S+ P
Sbjct: 126 SAGLGMAVANTLSGRPGNVIAVIGDGAMSAGMAYEAMNNAGAMHSRLIIILNDNDMSIAP 185

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      ALSS L+R+ S  ++R +RE AK + + + R +++ A K +E+AR    
Sbjct: 186 PA--------GALSSYLARLVSGDAYRSVREAAKQLGRLLPRFVYDRARKTEEFARNFWA 237

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRR---AEDT 375
             G TLFEELG+YY+GP+DGHN++ ++ VL+ V      GP+LVHVVT++ +    AE T
Sbjct: 238 --GGTLFEELGIYYVGPIDGHNLDQMLPVLKNVRDFKETGPILVHVVTQKGKGYAPAEAT 295

Query: 376 QKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQ 435
                     +  +     P  N +  Y   F E+LV EA KD  IV + A M     L 
Sbjct: 296 HDKYHAVNMFDVVTGKQVKPKPN-APVYTSVFAESLVKEAAKDDKIVAITAAMPSGTGLD 354

Query: 436 LFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLP 495
           +FQ+ FPER FDVG+AEQHAVTF+AGLA  G KPFC I S FLQR YDQVV+DV  Q LP
Sbjct: 355 IFQKTFPERTFDVGIAEQHAVTFAAGLATEGFKPFCTIYSTFLQRGYDQVVHDVAIQNLP 414

Query: 496 VRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVC 555
           VRF I  AGLVG+DG T  G+FDI+F+  LPNM+VMA +DE ELV MVAT A+ D+ P+ 
Sbjct: 415 VRFAIDRAGLVGADGATHAGSFDISFLGILPNMVVMAAADESELVHMVATAAAYDEGPIA 474

Query: 556 FRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGID 615
            RYPRG  V  D+P   G+P+EIG+G+++ EGK VA+L +GA +   +KA   L+ LG+ 
Sbjct: 475 LRYPRGEGVGIDMP-IEGVPLEIGRGRIMREGKQVAILSFGARLAEVMKAADELAALGVS 533

Query: 616 VTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFI----ALDGLLDSGV 671
            TVADARF KPLD +L+  L  +H  LIT+EEGS+GGFGS V+  +    ALDGL    +
Sbjct: 534 TTVADARFAKPLDEELIMRLASSHEALITIEEGSVGGFGSFVAQKLTDSGALDGLGARPL 593

Query: 672 KWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREAL 717
           K+R +VLPD +++H  P +  A AGL    I A  LS+LG  REAL
Sbjct: 594 KFRSMVLPDLFLDHDKPEKLYAQAGLDAKAIVAKVLSVLG--REAL 637


>gi|395790245|ref|ZP_10469739.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella taylorii 8TBB]
 gi|395426896|gb|EJF93014.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella taylorii 8TBB]
          Length = 640

 Score =  587 bits (1513), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 311/640 (48%), Positives = 415/640 (64%), Gaps = 21/640 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD +  P  L++L   +L QLA E+R+E  + VS T   L + L  +ELTVALH+VF
Sbjct: 6   TPLLDYICVPQDLRALPESDLVQLANELRAETINAVSVTGGHLGAGLGVIELTVALHYVF 65

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+I+WDVG Q Y HKILTGRR  I TLR++ G+SG+T RSES YDPF AGH   S+
Sbjct: 66  NTPEDRIIWDVGHQAYPHKILTGRRDKIRTLRQEGGLSGFTKRSESVYDPFGAGHSSTSI 125

Query: 199 SAGLGMAVARDIKGK-RECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLH 257
           SAGLGM+VA  +K + R  I++VI +G   AG AYEAM+NAG LD+ +IVILND+  S+ 
Sbjct: 126 SAGLGMSVASALKVETRRNIISVIGDGAMSAGMAYEAMNNAGALDARLIVILNDNDMSIA 185

Query: 258 PKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMI 317
           P           A+S+ L+R+ S  ++R LRE  K ++K++ +   E A + +E+ARG +
Sbjct: 186 P--------PTGAMSAHLARLVSRPAYRSLRERVKVLSKKLPKFFGEKARRSEEFARGFL 237

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQK 377
              G TLF+ELG YY+GP+DGHN+E L+ VL+ V      GPVLVHVVT    + +    
Sbjct: 238 --VGGTLFDELGFYYVGPIDGHNLEHLLPVLKNVREY-PYGPVLVHVVTH---KGKGYAP 291

Query: 378 SEAIEKQQEGASD-----SNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
           +EA   +  G +         +   + S +Y   F +AL+ EA  D  I+ + A M    
Sbjct: 292 AEASSDKYHGVNSFDVVTGKQINTQSNSLSYTKVFSKALIEEASHDDKIIGITAAMPTGT 351

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            L  F EKFPER FDVG+AEQHAVTF+AG+AC G KPF  I S FLQRAYDQ+++DV  Q
Sbjct: 352 GLDAFAEKFPERMFDVGIAEQHAVTFAAGIACEGYKPFVAIYSTFLQRAYDQIIHDVSIQ 411

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
           +LPVRF I  AG VG+DG T  G+FDI F+S LP  +VMAPSDE EL+ MV T A+ D  
Sbjct: 412 KLPVRFAIDRAGFVGADGATHAGSFDIVFLSTLPEFVVMAPSDEVELMHMVRTAAAYDQG 471

Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
           P+ FRYPRG  V  DLP  RG  +EIGKG++L EG  +AL+ +G  +   L A  +L + 
Sbjct: 472 PLSFRYPRGEGVGIDLP-ERGELLEIGKGRILREGSRIALVCFGTRMSEVLMAAGMLEEE 530

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 672
           G+  TVADARF KPLD  L+R L + H  L+T+EEG++GGFG+H+  F+A +GLL+ G+K
Sbjct: 531 GLSTTVADARFAKPLDKDLMRRLAREHEVLVTIEEGAMGGFGAHLLQFLAQEGLLEHGLK 590

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
            R + LPD Y+ H SP + L+  GL    I  T  + LGR
Sbjct: 591 VRTLKLPDEYLNHGSPEKVLSRIGLDAVGIINTVFTALGR 630


>gi|449016065|dbj|BAM79467.1| 1-deoxyxylulose-5-phosphate synthase [Cyanidioschyzon merolae
           strain 10D]
          Length = 772

 Score =  587 bits (1512), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 317/667 (47%), Positives = 418/667 (62%), Gaps = 34/667 (5%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V  P  ++  T+ E+KQLA E+R EL   VSKT   L +SL  VELTVALH+VF
Sbjct: 81  TPLLDAVRFPADMRQFTVGEVKQLAHELRWELLRAVSKTGGHLGASLGVVELTVALHYVF 140

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D I+WDV  QTY HKILTGRR  +HTLRK  GISG+T R ESEYD F AGH   S+
Sbjct: 141 NTPEDAIVWDVSHQTYPHKILTGRRHRMHTLRKSGGISGFTRRVESEYDVFGAGHSSTSI 200

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LG+A+ RD+ GK++ ++ VI +G    G AYEAM+NAGYL+S +IVILND+     P
Sbjct: 201 SAALGLAIGRDLAGKKQHVIAVIGDGALTGGMAYEAMNNAGYLNSRIIVILNDNGQVSLP 260

Query: 259 KIEESPKTS--INALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGM 316
              +S   +    ALS  +SR+ +SK F+ +R +AK  ++     +   AA++DEYAR  
Sbjct: 261 TGTKSAAGTGPAGALSGYMSRLLTSKEFQDVRAIAKEFSRLFPDPLQRTAAQLDEYARAW 320

Query: 317 I----GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRR- 371
           +    G   +TLFEELG YY+GPVDGH++E L++VL+ +       P+ +HV TE+ R  
Sbjct: 321 VAQGAGGNRATLFEELGFYYVGPVDGHDVEVLVNVLKNIRDAPGNKPIFLHVKTEKGRGY 380

Query: 372 --AEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGME 429
             AE          + + A+    +P  +   +Y   F +AL+ EA++D+ IV + A M 
Sbjct: 381 PPAESALDKYHGVSKFDLATGKQMVPM-HSPPSYTSVFAKALIAEADEDRRIVGITAAMP 439

Query: 430 MDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDV 489
               +  F E  P R FDVG+AEQHAVTF+AGL+  G KPFC I S FLQR YDQV++DV
Sbjct: 440 GGTGMGAFGEAHPTRCFDVGIAEQHAVTFAAGLSIQGFKPFCCIYSTFLQRGYDQVIHDV 499

Query: 490 DQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASI 549
             Q+LPVRF++  AGLVG+DGPT  G FD+ ++ C+PNM++MAPSDE ELV MVAT  + 
Sbjct: 500 ALQKLPVRFILDRAGLVGNDGPTHHGTFDLAYLGCIPNMMIMAPSDEIELVHMVATARAY 559

Query: 550 DDRPVCFRYPRGAIVRTDLP----GY-------RGIPIEIGKGKVLVEGKD--------- 589
           D+ P   RYPRG  V  D+     GY       RG  + IGKG+++ E K          
Sbjct: 560 DEGPCALRYPRGTAVGLDVLREHFGYDLEAIPVRGKVLPIGKGRIIREKKSASTADGAEI 619

Query: 590 ---VALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVE 646
              VA+L  G  +   + A   L  L +  TVADARF KPLD  L+R L +NH  LIT+E
Sbjct: 620 PRGVAILSLGTRLLEAVHAAGQLEALDVACTVADARFMKPLDTDLIRRLIRNHEVLITIE 679

Query: 647 EGSIGGFGSHVSHFIALDGLLDSG-VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAAT 705
           EGSIGGFG HV H+ AL+GLLD G  K RP+V+PD +IE  +  +Q   AGLT  HI  T
Sbjct: 680 EGSIGGFGDHVLHYAALNGLLDEGKCKVRPMVIPDVFIETGTQAEQYEEAGLTAAHIVRT 739

Query: 706 ALSLLGR 712
           AL L+G+
Sbjct: 740 ALQLVGK 746


>gi|414171842|ref|ZP_11426753.1| 1-deoxy-D-xylulose-5-phosphate synthase [Afipia broomeae ATCC
           49717]
 gi|410893517|gb|EKS41307.1| 1-deoxy-D-xylulose-5-phosphate synthase [Afipia broomeae ATCC
           49717]
          Length = 643

 Score =  587 bits (1512), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 307/640 (47%), Positives = 410/640 (64%), Gaps = 19/640 (2%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD    P  L+ L  ++L+Q A E+R E    VS T     + L  VELT ALH+VF
Sbjct: 7   TPLLDAAPTPDLLRKLKPEQLRQFADELRLETIDTVSVTGGHFGAGLGVVELTTALHYVF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+I+WDVG Q Y HKILTGRR  I TLR  +G+SG+T R+ESEYDPF A H   S+
Sbjct: 67  NTPDDRIIWDVGHQAYPHKILTGRRDRIRTLRMGNGLSGFTKRAESEYDPFGAAHSSTSI 126

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVARD+ G +  ++ VI +G+  AG AYEAM+NAG + S +IVILND+  S+ P
Sbjct: 127 SAGLGMAVARDLTGGKNNVIAVIGDGSMSAGMAYEAMNNAGAMHSRLIVILNDNDMSIAP 186

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                    + A+S+ L+R+ S K++   RE  K +  ++ +   + A + +EYARGM+ 
Sbjct: 187 --------PVGAMSAYLARLLSGKTYASAREALKNLAHKLPKFFEDRALRAEEYARGMV- 237

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRR---AEDT 375
             G TLFEELG +Y+GP+DGHN++ L+ VL  V      GP+LVHVVT++ +    AE +
Sbjct: 238 -TGGTLFEELGFFYVGPIDGHNLDHLLPVLTNVRD-APTGPILVHVVTQKGKGYAPAEAS 295

Query: 376 QKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQ 435
                   + + A+ + +    N + +Y   F ++LV EA KD  IV + A M     + 
Sbjct: 296 DDKYHAVAKFDVATGAQAKAKSN-APSYTSVFGQSLVKEARKDDKIVAITAAMPGGTGVD 354

Query: 436 LFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLP 495
           +F + FP+R FDVG+AEQHAVTF+AGLA  G KPFC I S FLQR YDQVV+DV  QRLP
Sbjct: 355 IFGKAFPDRTFDVGIAEQHAVTFAAGLATEGFKPFCAIYSTFLQRGYDQVVHDVAIQRLP 414

Query: 496 VRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVC 555
           VRF I  AGLVG DGPT  G+FD  ++ CLP  ++MA +DE +LV MVAT  +IDD P  
Sbjct: 415 VRFAIDRAGLVGQDGPTHAGSFDNVYLGCLPGFVIMAAADEADLVHMVATQVAIDDAPSA 474

Query: 556 FRYPRGAIVRTDLPGYRGIPIEIGKGKVLVE--GKD-VALLGYGAMVQNCLKARALLSKL 612
            RYPRG     ++P + G+P+ IGKG+++ E  GK  VALL +GA +  CLKA   L  L
Sbjct: 475 LRYPRGEGRGVEMPEF-GVPLPIGKGRIMREASGKSKVALLSFGARLGECLKAADELETL 533

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 672
           G+  TVADARF KPLD+ ++ +L + H  LIT+EEGSIGGFG+HV   +A  G LD G++
Sbjct: 534 GLSATVADARFMKPLDLDMILKLAREHEVLITIEEGSIGGFGTHVLQALADHGALDRGLR 593

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
            R +VLPD +I+H SP +    AGL    I A     LGR
Sbjct: 594 VRTLVLPDIFIDHDSPAKMYEQAGLDAKGIVAKVFEALGR 633


>gi|328544916|ref|YP_004305025.1| 1-deoxy-D-xylulose-5-phosphate synthase [Polymorphum gilvum
           SL003B-26A1]
 gi|326414658|gb|ADZ71721.1| 1-deoxy-D-xylulose 5-phosphate synthase [Polymorphum gilvum
           SL003B-26A1]
          Length = 639

 Score =  587 bits (1512), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 318/648 (49%), Positives = 412/648 (63%), Gaps = 29/648 (4%)

Query: 76  KEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALH 135
           K  TP+LD V +P  L++L   +L QLA E+R E    VS+T   L + L  VELTVALH
Sbjct: 4   KPHTPLLDKVTSPANLRALAEADLAQLADELRKETIDAVSETGGHLGAGLGVVELTVALH 63

Query: 136 HVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGC 195
           +VF+ P D+++WDVG Q Y HKILTGRR  I TLR+  G+SG+T R+ES YDPF A H  
Sbjct: 64  YVFNTPDDRLIWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTKRAESPYDPFGAAHSS 123

Query: 196 NSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHS 255
            S+SAGLGMAV RD+ G+   ++ VI +G   AG AYEAM+NAG + S +IV+LND+  S
Sbjct: 124 TSISAGLGMAVGRDLDGRANNVIAVIGDGAMSAGMAYEAMNNAGSMHSRLIVVLNDNDMS 183

Query: 256 LHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARG 315
           + P +         A+S+ L+++ S  +++ LR+ AK + + + R + E AAK +E+ARG
Sbjct: 184 IAPPV--------GAMSAYLAKLVSGPTYQSLRDAAKSIARALPRPLQEKAAKAEEFARG 235

Query: 316 MIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDT 375
                G TLFEELG YY+GPVDGHN+E L+ VL+ V    S GPVL+HVVT++ +     
Sbjct: 236 FW--TGGTLFEELGFYYVGPVDGHNLEHLLPVLRNVRDTHS-GPVLIHVVTQKGK---GY 289

Query: 376 QKSEAIEKQQEGA------SDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGME 429
             +E  + +  G       +   + P  N + +Y   F  +LV EAE+D  IV + A M 
Sbjct: 290 APAEGAKDKYHGVARFDVITGKQAKPKAN-APSYTSVFARSLVQEAEQDDKIVAITAAMP 348

Query: 430 MDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDV 489
               L LFQE FP+R FDVG+AEQHAVTF+AGLA  G KPF  I S FLQRAYDQVV+DV
Sbjct: 349 EGTGLDLFQEAFPKRTFDVGIAEQHAVTFAAGLATEGYKPFAAIYSTFLQRAYDQVVHDV 408

Query: 490 DQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASI 549
             Q LPVRF I  AGLVG+DGPT  GAFD  F++CLP  +VMA SDE EL  MVAT A+ 
Sbjct: 409 AIQGLPVRFPIDRAGLVGADGPTHAGAFDTAFLACLPGFVVMAASDEAELRHMVATAAAY 468

Query: 550 DDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALL 609
           DD P+ FRYPRG  +  +LP  RG  ++IGKG +  EG  VALL +GA +  C KA   L
Sbjct: 469 DDGPISFRYPRGEGMGVELP-ERGRVLDIGKGIIRREGTKVALLSFGARLGECFKAADEL 527

Query: 610 SKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDS 669
              G+  TVADARF KPLD  LV  L + H  L+T+EEGS+GGFGSHV   +A  G LD 
Sbjct: 528 DAAGLSTTVADARFAKPLDTDLVLRLAREHEVLVTIEEGSVGGFGSHVLAALAEAGALDR 587

Query: 670 GVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREAL 717
           G++ R + LPD++ +   P    A AGL        A ++L R  EAL
Sbjct: 588 GLRVRTMTLPDSFQDQDKPDALYAQAGL-------NATAILTRVFEAL 628


>gi|402820429|ref|ZP_10869996.1| hypothetical protein IMCC14465_12300 [alpha proteobacterium
           IMCC14465]
 gi|402511172|gb|EJW21434.1| hypothetical protein IMCC14465_12300 [alpha proteobacterium
           IMCC14465]
          Length = 643

 Score =  586 bits (1510), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 306/649 (47%), Positives = 420/649 (64%), Gaps = 22/649 (3%)

Query: 76  KEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALH 135
           K  TP+LD ++ P  +++L+ ++L QLA E+R+E  S VS+T   L + L  VELTVALH
Sbjct: 4   KLETPLLDKIKLPEDVRALSEEQLGQLAEELRAETVSAVSETGGHLGAGLGVVELTVALH 63

Query: 136 HVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGC 195
           +VF+ P D+++WDVG Q Y HKILTGRR  I TLR+  G+SG+T R+ES YDPF A H  
Sbjct: 64  YVFNTPDDRLIWDVGHQAYPHKILTGRRDRIRTLRQGGGLSGFTKRAESPYDPFGAAHSS 123

Query: 196 NSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHS 255
            S+SAGLGMAVARD+K     +V VI +G   AG AYEAM+NAG +D  +IVILND+  S
Sbjct: 124 TSISAGLGMAVARDLKETDNNVVAVIGDGAMSAGMAYEAMNNAGAMDGRLIVILNDNDMS 183

Query: 256 LHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARG 315
           + P         + A+S+ L+R+ S   +R+LR+  KG+  ++ R + E + K++EY RG
Sbjct: 184 IAP--------PVGAMSAYLARLLSGSGYRKLRKSLKGIASKMPRSIKEASRKMEEYTRG 235

Query: 316 MIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDT 375
                G TLFEE+G YY+GP+DGHN++ L+ VLQ V      GP+LVHVVT+   +    
Sbjct: 236 FW--TGGTLFEEIGFYYVGPIDGHNLDHLLPVLQNVRD-SVEGPILVHVVTQ---KGHGY 289

Query: 376 QKSEAIEKQQEGASDSN------SLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGME 429
             +EA   +  G S  +      S P  N   +Y   F ++L+ EAE DK+IV V A M 
Sbjct: 290 APAEAAADKYHGVSKFDIVTGLQSKPSTNIP-SYTSVFADSLIKEAETDKNIVAVTAAMP 348

Query: 430 MDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDV 489
               L  F   +P+R FDVG+AEQHAVTF+AG+A  GLKPF  I S FLQR YDQ+V+DV
Sbjct: 349 DGTGLDKFAHIYPDRCFDVGIAEQHAVTFAAGMATEGLKPFVAIYSTFLQRGYDQIVHDV 408

Query: 490 DQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASI 549
             Q+LPVRF I  AGLVG+DGPT  G+FD+ ++  LP+ ++MA +DE ELV+MV T A I
Sbjct: 409 AIQKLPVRFAIDRAGLVGADGPTHAGSFDMAYLGALPDFVLMAAADEAELVNMVHTAAQI 468

Query: 550 DDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALL 609
           +DRP  FRYPRG+     +P    + +EIGKG+++ EG+ +A+L YG  +     A   L
Sbjct: 469 NDRPSAFRYPRGSATGIAMPEKPQL-LEIGKGRIIREGQQIAILSYGTRLGEASLAADRL 527

Query: 610 SKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDS 669
            K G   TVADARF KPLD +L+ +L + H  LITVEEG +GGFG+HV HF+A +G+LD+
Sbjct: 528 DKEGHSTTVADARFMKPLDKELILQLAREHEILITVEEGGLGGFGAHVLHFLAEEGVLDA 587

Query: 670 GVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALL 718
           G+K R + LPD +I+  SP +    AGL   +I      ++GR  + ++
Sbjct: 588 GLKVRTLTLPDIFIDQDSPERMYDAAGLNSDNIYDAVKDVIGRGEKTII 636


>gi|451940393|ref|YP_007461031.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella australis
           Aust/NH1]
 gi|451899780|gb|AGF74243.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella australis
           Aust/NH1]
          Length = 635

 Score =  586 bits (1510), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 315/645 (48%), Positives = 410/645 (63%), Gaps = 31/645 (4%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V  P  L++L   +L +LA E+RSE   +VS T   L + L  +ELT+ALH+VF
Sbjct: 6   TPLLDRVRLPQDLRTLAESDLARLADELRSETIDVVSATGGHLGAGLGVIELTIALHYVF 65

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+I+WDVG QTY HKILTGRR  I TLR++ G+SG+T RSES YDPF AGH   S+
Sbjct: 66  NTPNDRIIWDVGHQTYPHKILTGRRDRIRTLRQEGGLSGFTKRSESVYDPFGAGHSSTSI 125

Query: 199 SAGLGMAVARDIKGK-RECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLH 257
           SAGLGMAVA  +KG+ R  I++VI +G   AG AYEAM+NAG L++ +IVILND+  S+ 
Sbjct: 126 SAGLGMAVASALKGEGRRNIISVIGDGAMSAGMAYEAMNNAGALNARLIVILNDNDMSIA 185

Query: 258 PKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMI 317
           P           A+S+ L+ + S  S+R  RE  K + K++ +   E A + +E ARG +
Sbjct: 186 P--------PTGAMSAYLACLVSRPSYRHFRERVKILNKKLPKFFSEKARRSEELARGFL 237

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR------- 370
              G TLF+ LG YY+GP+DGHN+  L+ VL+ V    + GPVLVH+VT + +       
Sbjct: 238 --VGGTLFDALGFYYVGPIDGHNLGHLLPVLKNVREYPN-GPVLVHIVTHKGKGYAPAEA 294

Query: 371 ---RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAG 427
              R     + + I  +Q  A  SN LP       Y   F +AL+ EA  D  IV V A 
Sbjct: 295 SSHRYHGVSRFDVITGKQIKAR-SNCLP-------YTKVFSKALIEEASYDDKIVAVTAA 346

Query: 428 MEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVN 487
           M     L +F EKFP R FDVG+AEQHAVTF+AG+AC G KPF  I S FLQR+YDQ+++
Sbjct: 347 MPTGTGLDVFAEKFPGRMFDVGIAEQHAVTFAAGVACEGYKPFVAIYSTFLQRSYDQIIH 406

Query: 488 DVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVA 547
           DV  Q+LPVRF I  AG VG+DGPT  G+FDI F++ LP+ IVMAPSDE EL+ MV T A
Sbjct: 407 DVSIQKLPVRFAIDRAGFVGADGPTHAGSFDIIFLAALPDFIVMAPSDEVELMHMVRTAA 466

Query: 548 SIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARA 607
             D  P+ FRYPRG      LP  RG  +EIGKG+VL EG  VAL+ +G  +   L A  
Sbjct: 467 DYDQGPISFRYPRGEGTGIVLP-QRGELLEIGKGRVLCEGSRVALVCFGTRLSEVLSAAE 525

Query: 608 LLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLL 667
            L   G+  TVADARF KPLD  L+R L + H  L+T+EEG++GGFG+H+  F+A +GLL
Sbjct: 526 ELEAEGLSTTVADARFAKPLDKNLMRRLAREHEVLVTIEEGAVGGFGAHLLQFLAQEGLL 585

Query: 668 DSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
           + G+K R +  PD Y+ H SP + L+L GL    I  T  S LGR
Sbjct: 586 EHGLKVRTLKFPDKYLNHGSPEKVLSLIGLDAAGIIKTVFSALGR 630


>gi|395778555|ref|ZP_10459067.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella elizabethae
           Re6043vi]
 gi|423715133|ref|ZP_17689357.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella elizabethae
           F9251]
 gi|395417763|gb|EJF84100.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella elizabethae
           Re6043vi]
 gi|395430617|gb|EJF96659.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella elizabethae
           F9251]
          Length = 635

 Score =  585 bits (1509), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 313/644 (48%), Positives = 413/644 (64%), Gaps = 29/644 (4%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V  P  L++L    L QLA E+R+E    VS T   L + L  VELTVALH++F
Sbjct: 6   TPLLDRVCFPQDLRALPESYLVQLANELRAETIDAVSVTGGHLGAGLGVVELTVALHYIF 65

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+I+WDVG QTY HKILTGRR  I TLR++ G+SG+T RSES YDPF AGH   S+
Sbjct: 66  NTPEDRIIWDVGHQTYPHKILTGRREKIRTLRQEGGLSGFTKRSESVYDPFGAGHSSTSI 125

Query: 199 SAGLGMAVARDIKGK-RECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLH 257
           SAGLGMAVA  +K + R  I+ VI +G   AG AYEAM+NAG LD+ +IV+LND+  S+ 
Sbjct: 126 SAGLGMAVASALKAEIRRNIIAVIGDGAMSAGMAYEAMNNAGALDARLIVVLNDNDMSIA 185

Query: 258 PKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMI 317
           P           A+S  L+R+ S  S+R LRE  K +++++ +   + A + +E+ARG++
Sbjct: 186 P--------PTGAMSGHLARLVSRPSYRHLRERVKILSEKLPKFFLDKARRSEEFARGLL 237

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQK 377
              G TLF+ELG YY+GP+DGHN   L+ VL+ V    + GPVLVHVVT + +     + 
Sbjct: 238 --VGGTLFDELGFYYVGPIDGHNFGHLLPVLKNVRQYPN-GPVLVHVVTHKGKGYPPAEA 294

Query: 378 SEA---------IEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGM 428
           S           +   ++  + SN LP       Y   F +AL+ EA  D  IV + A M
Sbjct: 295 SSDKYHGVNRFDVTTGRQVKAPSNILP-------YTKVFSKALIEEASHDDKIVGITAAM 347

Query: 429 EMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVND 488
                L  F EKFP++ FDVG+AEQHAVTF+AGLAC G KPF  I S FLQRAYDQ+++D
Sbjct: 348 PTGTGLDAFAEKFPKKMFDVGIAEQHAVTFAAGLACEGYKPFVAIYSTFLQRAYDQIIHD 407

Query: 489 VDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVAS 548
           V  Q+LPVRF I  AG VG+DG T  G+FDI F++ LP  +VMAPSDE EL+ MV T A+
Sbjct: 408 VSIQKLPVRFAIDRAGFVGADGATHAGSFDIVFLATLPEFVVMAPSDELELMHMVRTAAA 467

Query: 549 IDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARAL 608
            D  P+ FRYPRG  +  DLP  RG  +EIGKG+VL EG  +AL+ +G  +   L+A  +
Sbjct: 468 YDQGPISFRYPRGEGIGIDLP-KRGEILEIGKGRVLREGDRIALVCFGTRMSEVLRAAEM 526

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLD 668
           L   G+  TVADARF KPLD  L+R L + H  L+T+EEG+IGGFG+H+  F+A +GLL+
Sbjct: 527 LEAKGLSTTVADARFAKPLDKDLMRRLAREHEVLVTIEEGAIGGFGAHLLQFLAQEGLLE 586

Query: 669 SGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
            G+K R + LPD Y+ H SP + L+  GL    I  T L+ LGR
Sbjct: 587 HGLKVRTLKLPDEYLNHGSPEKVLSTIGLDAMGIVNTVLTALGR 630


>gi|346995044|ref|ZP_08863116.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ruegeria sp. TW15]
          Length = 642

 Score =  585 bits (1508), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 313/653 (47%), Positives = 411/653 (62%), Gaps = 34/653 (5%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           D+  TP+LDLV  P  LK  T  +L Q+A E+RSE  S VS T   L + L  VELT AL
Sbjct: 3   DRPNTPLLDLVNRPADLKQFTDAQLHQVAHELRSETVSAVSVTGGHLGAGLGVVELTTAL 62

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H VF  P DKI+WDVG Q Y HKILT RR  I TLR KDG+SG+T RSES YDPF A H 
Sbjct: 63  HAVFDTPRDKIIWDVGHQCYPHKILTERRDRIRTLRMKDGLSGFTKRSESPYDPFGAAHS 122

Query: 195 CNSVSAGLGMAVARDIKG-KRECI---VTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
             S+SA LG AVARD+ G   E +   + VI +G+  AG A+EAM+NAG+L+  +IVILN
Sbjct: 123 STSISAALGFAVARDLGGVTPEGLGDAIAVIGDGSMSAGMAFEAMNNAGHLNKRLIVILN 182

Query: 251 DSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVD 310
           D+  S+ P         + ALS+ LSRI + + F  L+  AKG    +     E A +  
Sbjct: 183 DNEMSIAP--------PVGALSNYLSRIYAEEPFHDLKAAAKGAVSLLPEPFREGAKRAK 234

Query: 311 EYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR 370
           +  +GM    G TLFEELG  Y+GP+DGH+++ L+ VL+ V +  + GP+L+HV+T++ +
Sbjct: 235 DMLKGMA--MGGTLFEELGFSYLGPIDGHDLDQLLPVLRAVKAKAT-GPILIHVLTKKGK 291

Query: 371 ----------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKD 420
                     +   T K + +  +Q+ A  +        + +Y   F + LV EA +D  
Sbjct: 292 GYAPAEQARDKGHATAKFDVVTGEQKKAPSN--------APSYTSVFGKTLVEEAARDDK 343

Query: 421 IVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQR 480
           IV V A M     L LF E++P R FDV +AEQH VTFSA LA GG+KPFC + S FLQR
Sbjct: 344 IVAVTAAMPDGTGLNLFAERYPSRCFDVAIAEQHGVTFSAALAAGGMKPFCAMYSTFLQR 403

Query: 481 AYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELV 540
            YDQVV+DV  QRLPVRF +  AGLVG+DG T  G+FDI +++ LP M+VMA +DE EL+
Sbjct: 404 GYDQVVHDVAIQRLPVRFAVDRAGLVGADGATHAGSFDIAYLANLPGMVVMAAADEAELM 463

Query: 541 DMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQ 600
            MVAT  + DD P+ FRYPRG  V  DLP  RG  +EIGKG+++ +G  VALL +G  + 
Sbjct: 464 HMVATAVAYDDGPIAFRYPRGEGVGVDLP-ERGEVLEIGKGRIIQKGARVALLSFGTRLA 522

Query: 601 NCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHF 660
              KA   LS  GI  T+ADARF KPLD  L+ +L  NH  LIT+EEG++GGFGSHV+  
Sbjct: 523 EVQKAAEALSARGITPTIADARFAKPLDRDLILDLAANHEALITIEEGAVGGFGSHVAQL 582

Query: 661 IALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRT 713
           +A +G+ D G+K+R +VLPD +I+ ASP    A+AG+    I A  LS+LG T
Sbjct: 583 LADEGVFDEGLKYRSMVLPDIFIDQASPADMYAVAGMDAEQIEAKVLSILGVT 635


>gi|258541495|ref|YP_003186928.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-01]
 gi|384041416|ref|YP_005480160.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-12]
 gi|384049931|ref|YP_005476994.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-03]
 gi|384053041|ref|YP_005486135.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-07]
 gi|384056273|ref|YP_005488940.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-22]
 gi|384058914|ref|YP_005498042.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-26]
 gi|384062208|ref|YP_005482850.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-32]
 gi|384118284|ref|YP_005500908.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-01-42C]
 gi|256632573|dbj|BAH98548.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-01]
 gi|256635630|dbj|BAI01599.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-03]
 gi|256638685|dbj|BAI04647.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-07]
 gi|256641739|dbj|BAI07694.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-22]
 gi|256644794|dbj|BAI10742.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-26]
 gi|256647849|dbj|BAI13790.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-32]
 gi|256650902|dbj|BAI16836.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-01-42C]
 gi|256653893|dbj|BAI19820.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-12]
          Length = 675

 Score =  585 bits (1508), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 313/653 (47%), Positives = 413/653 (63%), Gaps = 36/653 (5%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P LD VE P  L++L++++LKQ+A E+R+E    VS T   L +SL  VELTVALH VF 
Sbjct: 20  PALDRVEYPADLRNLSVEQLKQVADELRAETVDAVSTTGGHLGASLGVVELTVALHAVFD 79

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P DK++WDVG Q Y HKILTGRR  I TLR+  G+SG+T R+ES+YDPF A H   S+S
Sbjct: 80  TPDDKVIWDVGHQAYPHKILTGRRDRIRTLRQPGGLSGFTRRAESKYDPFGAAHSSTSIS 139

Query: 200 AGLGMAVARDIKGKRE------CIVTVISNGTTMAGQAYEAMSNA---GYLDSNMIVILN 250
           AGLGMAVA  ++ + +       ++ VI +G+  AG AYEAM+NA   G     +IVILN
Sbjct: 140 AGLGMAVAHHLRAEEDPSYRERNVIAVIGDGSISAGMAYEAMNNAAVAGPGAERLIVILN 199

Query: 251 DSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVD 310
           D+  S+ P +         A+S+ LSR+ SS+ F  LRE+A    K++   +   A K D
Sbjct: 200 DNEMSIAPPV--------GAMSNYLSRLMSSRKFMGLRELAGKFVKKLPAPVERTARKAD 251

Query: 311 EYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR 370
           EYARGMI   G TLFEELG YY+GPVDGH++  L+S+L+ +    + GP+++HV+TE+  
Sbjct: 252 EYARGMI--TGGTLFEELGFYYVGPVDGHDLPQLVSILRNLRDTDN-GPIMLHVITEKGH 308

Query: 371 RAEDTQKS----EAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHA 426
             +  +K+     A+ K      +    P G  S  Y   F   L   A  D  I  + A
Sbjct: 309 GYQPAEKAGDKYHAVAKFNVVTGEQKKGPAGPPS--YTSVFSRELTRRAATDNKIAAITA 366

Query: 427 GMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVV 486
            M     L  F + +P+R+FDVG+AEQHAVTF+AG+A  GL+PFC I S FLQRAYDQV+
Sbjct: 367 AMPSGTGLDAFAKAYPDRFFDVGIAEQHAVTFAAGMATEGLRPFCAIYSTFLQRAYDQVM 426

Query: 487 NDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATV 546
           +DV  Q+LPVRF I  AGLVG+DG T  G+FDI ++ CLP M +MAPSDE EL+ M AT 
Sbjct: 427 HDVVLQKLPVRFAIDRAGLVGADGATHAGSFDIAYLGCLPGMTIMAPSDELELLHMTATA 486

Query: 547 ASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVL--------VEGKDVALLGYGAM 598
           A  D+ P+  RYPRG+ +  DLP   G P+EIGKG+++         E   VA+L  G  
Sbjct: 487 ALFDEGPIALRYPRGSGLGLDLPA-EGTPLEIGKGRIIREMGGQSGPEKGGVAILSLGPR 545

Query: 599 VQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVS 658
           +  CLKA  +L+  G+  TVADARF KP D +LV  L +NH  LIT+EEGS GGFGS V 
Sbjct: 546 LAECLKAADMLAAHGLPPTVADARFAKPFDTELVENLARNHAVLITIEEGSEGGFGSLVG 605

Query: 659 HFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
           H +A  GLLD+ V++RP+ LPD +I+H +   Q A AGL+  HI  TALS LG
Sbjct: 606 HHLARTGLLDN-VRFRPLTLPDRFIDHNTQAAQYAEAGLSAPHIVGTALSALG 657


>gi|420240106|ref|ZP_14744367.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium sp. CF080]
 gi|398077668|gb|EJL68635.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium sp. CF080]
          Length = 639

 Score =  585 bits (1507), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 306/644 (47%), Positives = 419/644 (65%), Gaps = 26/644 (4%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V+ P  L+ +  ++L QLA E+R E+   VS+T   L + L  VELT+A+H VF
Sbjct: 7   TPLLDKVKLPADLREIEDRDLTQLARELRDEMIDAVSRTGGHLGAGLGVVELTIAIHKVF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D++++DVG Q Y HKILTGRR  I TLR++DG+SG+T R+ESEYDPF A H   S+
Sbjct: 67  NTPDDRLIFDVGHQCYPHKILTGRRDRIRTLRQEDGLSGFTRRAESEYDPFGAAHSSTSI 126

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVA D+ G +  ++ VI +G   AG AYEA++NAG LD+ +IVILND+  S+ P
Sbjct: 127 SAGLGMAVAADLSGSKRNVIAVIGDGAMSAGMAYEALNNAGALDARLIVILNDNDMSIAP 186

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S+ L+R+ S +++   R++ K +T  +G+ +     +  E+ARG + 
Sbjct: 187 --------PTGAMSAYLARLASGRTYMGFRDLGKKLTAYLGKNVDRAITRAVEHARGYV- 237

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G T+FEE+G Y+IGP+DGH+ + L+ VL+ V    + GPVL+HVVT++ +       +
Sbjct: 238 -TGGTMFEEMGFYHIGPIDGHSFDHLLPVLRNVRD-NARGPVLIHVVTQKGK---GYAPA 292

Query: 379 EAIEKQQEG--------ASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
           EA   +  G         + + S P    + +Y   F EALV EA  D+ IV V A M  
Sbjct: 293 EAAADKYHGVNKFDVITGAQAKSKP---NAPSYTSVFGEALVQEASLDEKIVGVTAAMPN 349

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              +    + FP R FDVG+AEQHAVTF+AGLA  G KPFC + S FLQR YDQVV+DV 
Sbjct: 350 GTGIDKLADVFPARTFDVGIAEQHAVTFAAGLAAEGYKPFCALYSTFLQRGYDQVVHDVA 409

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q LPVRF I  AGLVG+DGPT  G+FD TF++ LP M+VMA +DE EL  MV T A+ D
Sbjct: 410 IQGLPVRFPIDRAGLVGADGPTHAGSFDTTFLATLPGMVVMAAADEAELKHMVRTAAAYD 469

Query: 551 DRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLS 610
           + P+ FRYPRG  V  +LP  RG  +EIGKG+V+ +G  VALL +G  ++ CL A   L 
Sbjct: 470 EGPISFRYPRGEGVGVELP-ERGQILEIGKGRVVKQGAKVALLSFGTRLKECLLAAEDLD 528

Query: 611 KLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSG 670
             G+  TVADARF KPLD +L+R+L ++H  LIT+EEG++GGFGSHV  F+A +GLLD+G
Sbjct: 529 AAGLSTTVADARFAKPLDQELIRQLARHHEVLITIEEGAVGGFGSHVLQFLATEGLLDNG 588

Query: 671 VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTR 714
           +K R +VLPD +++ ASP    A AGL    I +T    LG+T+
Sbjct: 589 LKIRSLVLPDIWMQQASPDAMYAKAGLDRAGIVSTVFKTLGQTQ 632


>gi|258542580|ref|YP_003188013.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-01]
 gi|384042501|ref|YP_005481245.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-12]
 gi|384051018|ref|YP_005478081.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-03]
 gi|384054126|ref|YP_005487220.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-07]
 gi|384057360|ref|YP_005490027.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-22]
 gi|384060001|ref|YP_005499129.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-26]
 gi|384063293|ref|YP_005483935.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-32]
 gi|384119303|ref|YP_005501927.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-01-42C]
 gi|256633658|dbj|BAH99633.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-01]
 gi|256636717|dbj|BAI02686.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-03]
 gi|256639770|dbj|BAI05732.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-07]
 gi|256642826|dbj|BAI08781.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-22]
 gi|256645881|dbj|BAI11829.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-26]
 gi|256648934|dbj|BAI14875.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-32]
 gi|256651921|dbj|BAI17855.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-01-42C]
 gi|256654978|dbj|BAI20905.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-12]
          Length = 662

 Score =  584 bits (1506), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 313/653 (47%), Positives = 412/653 (63%), Gaps = 36/653 (5%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P LD VE P  L++L++++LKQ+A E+R+E    VS T   L +SL  VELTVALH VF 
Sbjct: 17  PALDRVEYPADLRNLSVEQLKQVADELRAETVDAVSTTGGHLGASLGVVELTVALHAVFD 76

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P DK++WDVG Q Y HKILTGRR  I TLR+  G+SG+T R+ES+YDPF A H   S+S
Sbjct: 77  TPDDKVIWDVGHQAYPHKILTGRRDRIRTLRQPGGLSGFTRRAESKYDPFGAAHSSTSIS 136

Query: 200 AGLGMAVARDIKG------KRECIVTVISNGTTMAGQAYEAMSNA---GYLDSNMIVILN 250
           AGLGMAVA  ++       +   ++ VI +G+  AG AYEAM+NA   G     +IVILN
Sbjct: 137 AGLGMAVAHHLRAEEDPSYRERNVIAVIGDGSISAGMAYEAMNNAAVAGPGAERLIVILN 196

Query: 251 DSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVD 310
           D+  S+ P +         A+S+ LSR+ SS+ F  LRE+A    K++   +   A K D
Sbjct: 197 DNEMSIAPPV--------GAMSNYLSRLMSSRKFMGLRELAGKFVKKLPAPVERTARKAD 248

Query: 311 EYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR 370
           EYARGMI   G TLFEELG YY+GPVDGH++  L+S+L+ +    + GP+++HV+TE+  
Sbjct: 249 EYARGMI--TGGTLFEELGFYYVGPVDGHDLPQLVSILRNLRDTDN-GPIMLHVITEKGH 305

Query: 371 RAEDTQKS----EAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHA 426
             +  +K+     A+ K      +    P G  S  Y   F   L   A  D  I  + A
Sbjct: 306 GYQPAEKAGDKYHAVAKFNVVTGEQKKGPAGPPS--YTSVFSRELTRRAATDNKIAAITA 363

Query: 427 GMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVV 486
            M     L  F + +P+R+FDVG+AEQHAVTF+AG+A  GL+PFC I S FLQRAYDQV+
Sbjct: 364 AMPSGTGLDAFAKAYPDRFFDVGIAEQHAVTFAAGMATEGLRPFCAIYSTFLQRAYDQVM 423

Query: 487 NDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATV 546
           +DV  Q+LPVRF I  AGLVG+DG T  G+FDI ++ CLP M +MAPSDE EL+ M AT 
Sbjct: 424 HDVVLQKLPVRFAIDRAGLVGADGATHAGSFDIAYLGCLPGMTIMAPSDELELLHMTATA 483

Query: 547 ASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVL--------VEGKDVALLGYGAM 598
           A  D+ P+  RYPRG+ +  DLP   G P+EIGKG+++         E   VA+L  G  
Sbjct: 484 ALFDEGPIALRYPRGSGLGLDLPA-EGTPLEIGKGRIIREMGGQSGPEKGGVAILSLGPR 542

Query: 599 VQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVS 658
           +  CLKA  +L+  G+  TVADARF KP D +LV  L +NH  LIT+EEGS GGFGS V 
Sbjct: 543 LAECLKAADMLAAHGLPPTVADARFAKPFDTELVENLARNHAVLITIEEGSEGGFGSLVG 602

Query: 659 HFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
           H +A  GLLD+ V++RP+ LPD +I+H +   Q A AGL+  HI  TALS LG
Sbjct: 603 HHLARTGLLDN-VRFRPLTLPDRFIDHNTQAAQYAEAGLSAPHIVGTALSALG 654


>gi|49475232|ref|YP_033273.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella henselae str.
           Houston-1]
 gi|81648131|sp|Q6G4D1.1|DXS_BARHE RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|49238037|emb|CAF27244.1| 1-deoxyxylulose-5-phosphate synthase [Bartonella henselae str.
           Houston-1]
          Length = 640

 Score =  584 bits (1506), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 313/645 (48%), Positives = 412/645 (63%), Gaps = 31/645 (4%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V  P  L++    +L +LA E+R+E   +VS T   L + L  +ELTVALH+VF
Sbjct: 6   TPLLDRVCEPQDLRAFPESDLARLADELRAETIDVVSVTGGHLGAGLGVIELTVALHYVF 65

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+I+WDVG Q Y HKILTGRR  I TLR++ G+SG+T RSES YDPF AGH   S+
Sbjct: 66  NTPEDRIIWDVGHQAYPHKILTGRREKIRTLRQEGGLSGFTKRSESVYDPFGAGHSSTSI 125

Query: 199 SAGLGMAVARDIKG-KRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLH 257
           SAGLGMAVA  +K  KR  IV VI +G   AG AYEAM+NAG L++ +IV+LND+  S+ 
Sbjct: 126 SAGLGMAVASALKAEKRRNIVAVIGDGAMSAGMAYEAMNNAGALNARLIVVLNDNDMSIA 185

Query: 258 PKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMI 317
           P           A+S+ L+R+ S  ++R LRE  K + +++ +   + A + +E+ARG +
Sbjct: 186 P--------PTGAMSAHLARLVSRPAYRSLRERVKVLGEKLPKFFLDKARRSEEFARGFL 237

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR------- 370
              G TLFEELG YY+GP+DGHN++ L+ VL+ V    + GPVL+HVVT + +       
Sbjct: 238 --VGGTLFEELGFYYVGPIDGHNLKHLLPVLKNVREYPT-GPVLIHVVTHKGKGYAPAEA 294

Query: 371 ---RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAG 427
              +     + + I  +Q  AS SN LP       Y   F +AL  EA  D  IV + A 
Sbjct: 295 SLDKYHGVNRFDIITGKQVKAS-SNVLP-------YTKVFSKALREEASYDDKIVAITAA 346

Query: 428 MEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVN 487
           M     L  F EKFPER FDVG+AEQHAVTF+AG+AC G KPF  I S FLQRAYDQ+++
Sbjct: 347 MPTGTGLDFFAEKFPERMFDVGIAEQHAVTFAAGMACEGYKPFVAIYSTFLQRAYDQIIH 406

Query: 488 DVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVA 547
           DV  Q+LPVRF I  AG VG+DG T  G+FDI F++ LP  +VMAPSDE EL+ MV T A
Sbjct: 407 DVSIQKLPVRFAIDRAGFVGADGATHAGSFDIVFLTTLPEFVVMAPSDEVELMHMVRTAA 466

Query: 548 SIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARA 607
           + D  P+ FRYPRG  +  DLP  RG  +EIGKG++L EG  +AL+ +G  +   L A  
Sbjct: 467 AYDQGPISFRYPRGEGIGMDLP-QRGEILEIGKGRILHEGNRIALVCFGTRISEVLVAAD 525

Query: 608 LLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLL 667
            LS  G+  TVADARF KPLD  L+R L + H  L+T+EEG+IGGFG+H+  F+A +GLL
Sbjct: 526 ELSAEGLSTTVADARFAKPLDKDLMRRLAREHEVLVTIEEGAIGGFGAHLLQFLAQEGLL 585

Query: 668 DSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
           + G+K R + LPD Y+ H S  + L+  GL    I  T  S LGR
Sbjct: 586 EHGLKVRTLKLPDEYLNHGSQEKVLSRIGLDAVGIVNTVFSALGR 630


>gi|395780213|ref|ZP_10460680.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella washoensis
           085-0475]
 gi|395419480|gb|EJF85780.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella washoensis
           085-0475]
          Length = 640

 Score =  583 bits (1504), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 316/647 (48%), Positives = 413/647 (63%), Gaps = 29/647 (4%)

Query: 76  KEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALH 135
           K  TP+LD +  P  L++L   +L QLA E+R+E    VS T   L + L  VELTVALH
Sbjct: 3   KPITPLLDCIRLPQDLRALPQSDLVQLADELRAETIDAVSITGGHLGAGLGVVELTVALH 62

Query: 136 HVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGC 195
           +VF+ P D+I+WDVG QTY HKILTGRR+ I TLR+  G+SG+T RSES YDPF AGH  
Sbjct: 63  YVFNTPDDRIIWDVGHQTYPHKILTGRRNRIRTLRQDGGLSGFTKRSESVYDPFGAGHSS 122

Query: 196 NSVSAGLGMAVARDIKGK-RECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
            S+SAGLGMAVA  +K + R  I+ VI +G   AG AYEAM+NAG LD+ +IVILND+  
Sbjct: 123 TSISAGLGMAVASALKAEERRNIIAVIGDGAMSAGMAYEAMNNAGALDARLIVILNDNDM 182

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+ P           A+S+ L+R+ S  S+R LRE  K +++++ +   + A + +E+AR
Sbjct: 183 SIAP--------PTGAMSAHLARLVSRPSYRNLRERVKILSEKLPKFFLDKARRSEEFAR 234

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAED 374
           G +   G TLF+ELG YY+GP+DGHN   L+ VL+ V      GPVLVHVVT + +    
Sbjct: 235 GFL--VGGTLFDELGFYYVGPIDGHNFGHLLPVLKNVREYPD-GPVLVHVVTHKGKGYAP 291

Query: 375 TQKSEA---------IEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVH 425
            + S           I   ++  + SN+L       +Y   F +AL+ EA  D  IV + 
Sbjct: 292 AEASSDKYHGVNRFDIVTGKQIKTQSNAL-------SYTKVFSKALIEEASHDDKIVSIT 344

Query: 426 AGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQV 485
           A M     L  F EKFPER FDVG+AEQHAVTF+AG+AC G KPF  I S FLQRAYDQ+
Sbjct: 345 AAMPTGTGLDSFAEKFPERMFDVGIAEQHAVTFAAGIACEGYKPFVAIYSTFLQRAYDQI 404

Query: 486 VNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVAT 545
           ++DV  Q+LPVRF I  AG VG+DG T  G+FDI F++ LP  +VMAPSDE EL+ MV T
Sbjct: 405 IHDVSIQKLPVRFAIDRAGFVGADGATHAGSFDIVFLTTLPEFVVMAPSDEIELMHMVRT 464

Query: 546 VASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKA 605
            A+ D  P+ FRYPRG  V  DLP  RG  +EIGKG+VL EG  +AL+ +GA +   L A
Sbjct: 465 AAAYDQGPISFRYPRGEGVGMDLP-QRGEVLEIGKGRVLREGNRIALVCFGARMTEVLVA 523

Query: 606 RALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDG 665
              L   G+  TVADARF KPLD  L+R L + H  L+T+EEG++GGFG+H+  F+A +G
Sbjct: 524 ADELRAEGLSTTVADARFAKPLDKDLMRRLAREHEVLVTIEEGAMGGFGAHLLQFLAQEG 583

Query: 666 LLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
           LL+ G+K R + LPD Y++H SP   L+  GL    I  T  + LGR
Sbjct: 584 LLEHGLKVRTLKLPDEYLDHGSPKTVLSRIGLDALGIINTVFTALGR 630


>gi|90420127|ref|ZP_01228035.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90335461|gb|EAS49211.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 638

 Score =  583 bits (1504), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 300/639 (46%), Positives = 412/639 (64%), Gaps = 16/639 (2%)

Query: 76  KEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALH 135
           K  TP+LD + +P  L++L   +L+Q+A E+R++L   VSKT   L + L  VELTVA+H
Sbjct: 4   KSVTPLLDQISSPADLRTLKEGQLRQVADELRTDLIDAVSKTGGHLGAGLGVVELTVAIH 63

Query: 136 HVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGC 195
           HVF+ P D+++WDVG Q Y HK+LTGRR  + T+R++ G+SG+  R+ESEYDPF AGH  
Sbjct: 64  HVFNTPDDRLIWDVGHQAYPHKLLTGRRDGMRTVRQEGGLSGFAKRTESEYDPFGAGHSS 123

Query: 196 NSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHS 255
            S+SAGLGMAVARD+ G +  ++ VI +G   AG AYEAM+NAG LD+ +IVILND+  S
Sbjct: 124 TSISAGLGMAVARDLSGGKNNVIAVIGDGAMSAGMAYEAMNNAGALDARLIVILNDNDMS 183

Query: 256 LHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARG 315
           + P           A+S+ L+R+ S K++R LR+ AK +++ +     E A + +EY RG
Sbjct: 184 IAPP--------TGAMSAYLARLVSGKTYRSLRDQAKSISQHLPGFFREGARRTEEYTRG 235

Query: 316 MIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRR---A 372
                G T+FEELG YY+GP+DGH+++ L+ VL+ V      GP+LVHVVT++ +    A
Sbjct: 236 FF--TGGTMFEELGFYYVGPIDGHDLDHLLPVLKNVRD-AKTGPILVHVVTKKGKGYGPA 292

Query: 373 EDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
           E++        + +  + + +   GN + +Y   F ++L+ EA+ D  IV V+A M    
Sbjct: 293 ENSADKYHGVSKFDVITGAQAKSKGN-APSYTGVFADSLIQEAQDDDRIVAVNAAMPNGT 351

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            L  F E FP+R FDVG+AEQHAVTF AGLA  G KPF  I S FLQRAYDQ+V+DV  Q
Sbjct: 352 GLDKFAEIFPKRTFDVGIAEQHAVTFCAGLASDGYKPFAAIYSTFLQRAYDQIVHDVAIQ 411

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
           +LPVRF I  AG VG+DGPT  G+FD  F+  LP M+VMA +DE EL  MV T A  D+ 
Sbjct: 412 KLPVRFAIDRAGYVGADGPTHAGSFDTGFLCPLPGMVVMAAADEAELRHMVRTAAVYDEG 471

Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
           P+ FRYPRG     D+P  RG  +EIGKG+++ EG  VA+L +G  + + + A   L   
Sbjct: 472 PISFRYPRGNGTGVDMP-ERGQALEIGKGRIVREGTKVAILSFGTRLADSVAAAEELETF 530

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 672
           G+  TVADARF KPLD +L+  L +NH  LITVEEG+ GGF S V   +A  GLLD G+K
Sbjct: 531 GLSTTVADARFAKPLDTELIGRLARNHEVLITVEEGASGGFASQVLEHLAARGLLDHGLK 590

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
            RP+++PD +++HA+P   +  A L    I  T    LG
Sbjct: 591 IRPLIMPDRFLDHAAPETMIRQAALDRQGIVDTVFRALG 629


>gi|149202565|ref|ZP_01879537.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseovarius sp. TM1035]
 gi|149143847|gb|EDM31881.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseovarius sp. TM1035]
          Length = 643

 Score =  583 bits (1503), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 319/653 (48%), Positives = 408/653 (62%), Gaps = 38/653 (5%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           D+  TP+LD V +P  LK  +  +L QLA E+RSE  S VS+T   L + L  VELTVAL
Sbjct: 4   DRPQTPLLDQVASPADLKRFSDSQLVQLAHELRSETISAVSETGGHLGAGLGVVELTVAL 63

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           HHVF AP DKI+WDV  Q Y HKILTGRR  I TLR+KDG+SG+T RSES YDPF A H 
Sbjct: 64  HHVFDAPRDKIIWDVSHQCYPHKILTGRRDRIRTLRQKDGLSGFTKRSESPYDPFGAAHS 123

Query: 195 CNSVSAGLGMAVARDIKGKREC------IVTVISNGTTMAGQAYEAMSNAGYLDSNMIVI 248
             S+SA LG AVARD+ G   C       + VI +G   AG A+EAM+NAG+L   +IVI
Sbjct: 124 STSISAALGFAVARDLGGN--CPSGLGDAIAVIGDGAMSAGMAFEAMNNAGHLKKRLIVI 181

Query: 249 LNDSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAK 308
           LND+  S+ P +         ALSS LSR+ +   F+  +  AKG    +     E A +
Sbjct: 182 LNDNEMSIAPPV--------GALSSYLSRLYAEAPFQDFKAAAKGAISLLPPPFQEGARR 233

Query: 309 VDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEE 368
             +  +G+    G TLFEELG  Y+GP+DGH++  L+ VL+ V +  + GP+L+HV+T++
Sbjct: 234 AKDMLKGLA--VGGTLFEELGFSYVGPIDGHDLHQLLPVLRTVKARAT-GPILIHVLTKK 290

Query: 369 NR------RAED----TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKD 418
            +      RA D    T K + +  +Q   S SN+        +Y   F +AL+  A +D
Sbjct: 291 GKGYGPAERARDGGHATAKFDVLTGEQR-KSPSNA-------PSYTGVFAKALLAHAAQD 342

Query: 419 KDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFL 478
             I  V A M     L LF E++P R FDVG+AEQHAVTFSAGLA GGLKPFC + S FL
Sbjct: 343 DKICAVTAAMPDGTGLNLFAERYPSRLFDVGIAEQHAVTFSAGLAAGGLKPFCALYSTFL 402

Query: 479 QRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDE 538
           QR YDQVV+DV  QRLPVRF I  AGLVG+DG T  GAFD  F++ LP  +VMA +DE E
Sbjct: 403 QRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGAFDTAFLANLPGFVVMAAADEAE 462

Query: 539 LVDMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAM 598
           LV MVAT A+ D+ P+ FRYPRG  +   +P  RG P+EIGKG+++  G  VA+L +G  
Sbjct: 463 LVHMVATAAAHDEGPIAFRYPRGEGMGVTMP-ERGEPLEIGKGRIIQTGARVAILSFGTR 521

Query: 599 VQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVS 658
           +   LKA   L   GI  T+ADARF KPLD  L+ +L QNH  +ITVEEG+IGGF SHVS
Sbjct: 522 LSEVLKASEALRARGITPTIADARFAKPLDEALILDLVQNHEAMITVEEGAIGGFASHVS 581

Query: 659 HFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
           HF+A   + D G K+R +VLPD +I+ AS     A+A L    I A  L +LG
Sbjct: 582 HFLAEAQVFDRGFKFRSMVLPDTFIDQASAEDMYAVARLNAADIEARVLDVLG 634


>gi|163761048|ref|ZP_02168126.1| 1-deoxy-D-xylulose-5-phosphate synthase [Hoeflea phototrophica
           DFL-43]
 gi|162281829|gb|EDQ32122.1| 1-deoxy-D-xylulose-5-phosphate synthase [Hoeflea phototrophica
           DFL-43]
          Length = 643

 Score =  583 bits (1502), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 309/644 (47%), Positives = 413/644 (64%), Gaps = 22/644 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V +P  LK +  K+L QLA E+R+E+   VS T   L + L  VELTVA+H VF
Sbjct: 7   TPLLDTVRSPSDLKQIDDKQLPQLADELRAEMIDAVSHTGGHLGAGLGVVELTVAIHKVF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D++++DVG Q Y HKILTGRR  I TLR+++G+SG+T RSESEYD F AGH   S+
Sbjct: 67  DTPHDRLIFDVGHQCYPHKILTGRRDRIRTLRQENGLSGFTKRSESEYDDFGAGHSSTSI 126

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVA  ++ K   +V+VI +G   AG A+EA++NAG LD+ +IVILND+  S+ P
Sbjct: 127 SAGLGMAVASQLQNKPRHVVSVIGDGAMSAGMAFEALNNAGALDARLIVILNDNDMSIAP 186

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S+ L+R+ S +++   R+  K +T  +G+ +     +  E+ARG + 
Sbjct: 187 --------PTGAMSAYLARMASGRTYMGFRDFGKKLTAYLGKNIDRAITRAVEHARGYV- 237

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G T+FEELG Y+IGP+DGHN++ L+ VL+ V   G  GPVL+HVVT++ +       +
Sbjct: 238 -TGGTMFEELGFYHIGPIDGHNLDHLLPVLRNVRDNGD-GPVLIHVVTQKGK---GYGPA 292

Query: 379 EAIEKQQEGASDSNSLPFGNYSR------TYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
           EA   +  G S  + +  G  ++      +Y   F E LV E   D  IV + A M    
Sbjct: 293 EAAADKYHGVSKFDVIT-GTQAKAKPNAPSYTAVFGETLVQEGGYDDKIVAISAAMPSGT 351

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            +  F + FPER FDVG+AEQHAVTF+AG+A  GLKPFC I S FLQR YDQVV+DV  Q
Sbjct: 352 GVDKFAKVFPERTFDVGIAEQHAVTFAAGMATEGLKPFCAIYSTFLQRGYDQVVHDVAIQ 411

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
           +LPVRF I  AG VG+DG T  G+FD T+++CLP  +VMA +DE EL  MV T  + D+ 
Sbjct: 412 KLPVRFPIDRAGFVGADGATHAGSFDTTYLACLPGFVVMAAADEAELKHMVRTAVAYDEG 471

Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
           P+ FRYPRG  V  D+P  RG  +EIGKG+V+ EG  VAL+ +G  +  CL A   L   
Sbjct: 472 PLSFRYPRGEGVGVDMP-ERGQILEIGKGRVMREGSKVALISFGTRLAECLVAAEDLDAA 530

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 672
           G+  TVADARF KPLD +L+R+L ++H  LIT+EEGS+GGFGSHV  F+A +GLLD G+K
Sbjct: 531 GLSTTVADARFAKPLDHELIRQLARHHEVLITIEEGSVGGFGSHVLQFLATEGLLDGGLK 590

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREA 716
            R +VLPD +++HASP    A AGL    I  T    LG    A
Sbjct: 591 VRSMVLPDIFMDHASPDVMYARAGLDRKGIVDTVFRALGTENPA 634


>gi|114706808|ref|ZP_01439708.1| 1-deoxy-D-xylulose-5-phosphate synthase [Fulvimarina pelagi
           HTCC2506]
 gi|114537756|gb|EAU40880.1| 1-deoxy-D-xylulose-5-phosphate synthase [Fulvimarina pelagi
           HTCC2506]
          Length = 635

 Score =  583 bits (1502), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 310/640 (48%), Positives = 403/640 (62%), Gaps = 22/640 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD ++ P  L+    K+L+Q+A E+RS+L   VS+T   L + L  VELTVALH+VF
Sbjct: 3   TPLLDQIDTPADLRRFKEKDLRQIADELRSDLIDAVSQTGGHLGAGLGVVELTVALHYVF 62

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+++WDV  Q Y HKILT RR  + T+R++ G+SG+  R+ESEYDPF AGH   S+
Sbjct: 63  NTPDDRLIWDVSHQAYPHKILTQRRERMRTVRQEGGLSGFAKRTESEYDPFGAGHSSTSI 122

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVARD+ G +  +V+VI +G   AG AYEAM+NAG LD+ +IVILND+  S+ P
Sbjct: 123 SAGLGMAVARDLAGAKNNVVSVIGDGAMSAGMAYEAMNNAGALDARLIVILNDNDMSIAP 182

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S  L+R+ S K++R LR  A+  T+R+     E A K +EY RG   
Sbjct: 183 --------PTGAMSHYLARLVSGKTYRTLRNRARDFTQRLPDFFREGARKTEEYTRGFF- 233

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G TLFEELG YYIGP+DGH+++ L+ VL+ V      GP+LVHVVT++ +  E  + S
Sbjct: 234 -TGGTLFEELGFYYIGPIDGHDLDALVPVLKNVRD-AETGPILVHVVTKKGKGYEPAESS 291

Query: 379 EAIEKQQEGASD------SNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
                +  G S       + S   GN + +Y + F  +L+ EA  D  IV V+A M    
Sbjct: 292 ---ADKYHGVSKFDVITGAQSKSKGN-APSYTNVFASSLIEEARHDDKIVAVNAAMPAGT 347

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            L  F E +P R FDVG+AEQHAVTF AGLA  G KPF  I S FLQRAYDQVV+DV  Q
Sbjct: 348 GLDKFGEAYPTRTFDVGIAEQHAVTFCAGLATEGYKPFAAIYSTFLQRAYDQVVHDVAIQ 407

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
            LPVRF I  AG VG+DG T  G+FD  ++  LP  +VMA SDE EL  MV T A+ D+ 
Sbjct: 408 HLPVRFAIDRAGFVGADGATHAGSFDTAYLCPLPGFVVMASSDEAELRHMVRTAAAYDEG 467

Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
           P+ FRYPRG     D+P  RG  +EIGKG+++ EG  VA+L +G  + + L A   L   
Sbjct: 468 PISFRYPRGNGTGVDMP-ERGEVLEIGKGRLIKEGSKVAILAFGTRLTDSLAAAEELDGY 526

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 672
           G+  TVADARF KPLD  LV  L +NH  LITVEEGS GGF + V   +A  GLLD G+K
Sbjct: 527 GLSTTVADARFAKPLDTDLVERLARNHEVLITVEEGSSGGFAAQVLQHLASVGLLDMGLK 586

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
            RPIV+PD +++H  P +  A AGL    I +T    LGR
Sbjct: 587 IRPIVMPDAFVDHGVPAKMNAEAGLDKAGIVSTVFRALGR 626


>gi|121602344|ref|YP_988719.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella bacilliformis
           KC583]
 gi|421760528|ref|ZP_16197344.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella bacilliformis
           INS]
 gi|166198602|sp|A1URW6.1|DXS_BARBK RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|120614521|gb|ABM45122.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella bacilliformis
           KC583]
 gi|411174945|gb|EKS44972.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella bacilliformis
           INS]
          Length = 638

 Score =  583 bits (1502), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 313/650 (48%), Positives = 414/650 (63%), Gaps = 30/650 (4%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V +PL L++L   +L +LA E+R+E+  +VS T   L + L  VELT+ALH++F
Sbjct: 6   TPLLDCVLSPLDLRALPASDLARLADELRAEMIDVVSVTGGHLGAGLGVVELTIALHYIF 65

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+I+WDVG Q Y HKILTGRR  I TLR++ G+SG+T RSES YDPF AGH   S+
Sbjct: 66  NTPDDRIIWDVGHQAYPHKILTGRRDKIRTLRQEGGLSGFTKRSESIYDPFGAGHSSTSI 125

Query: 199 SAGLGMAVARDIKGK-RECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLH 257
           SAGLGMA+A  +K + R  ++ VI +G   AG AYEAM+NAG LD+ +IVILND+  S+ 
Sbjct: 126 SAGLGMAMASALKAEERRNVIAVIGDGAMSAGMAYEAMNNAGALDARLIVILNDNDMSIA 185

Query: 258 PKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMI 317
           P           A+S+ L+R+ S  S+R LRE  K  +K+  +   E A++ +E+ARG +
Sbjct: 186 P--------PTGAMSAHLARLVSRPSYRHLRERIKLFSKKFPKFFSEQASRSEEFARGFL 237

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR----RAE 373
              G TLF+ELG YY+GP+DGHN E L+ VL+ V +  + GPVLVHVVT + +      E
Sbjct: 238 --VGGTLFDELGFYYVGPIDGHNFEHLLPVLKNVRAYPN-GPVLVHVVTHKGKGYAPAEE 294

Query: 374 DTQKSEAIEK-----QQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGM 428
              K   + +      ++  + S  L       +Y   F +AL+ EA  D  IV + A M
Sbjct: 295 SADKYHGVNRFDVVTGKQVKAQSTRL-------SYTKVFSKALIEEATHDHKIVAITAAM 347

Query: 429 EMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVND 488
                L  F EKF +R FDVG+AEQHAVTF+AG+AC G KPF  I S FLQRAYDQ+++D
Sbjct: 348 PTGTGLDSFAEKFSDRMFDVGIAEQHAVTFAAGIACEGYKPFVAIYSTFLQRAYDQIIHD 407

Query: 489 VDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVAS 548
           V  Q+LPVRF I  AG VG+DG T  G+FDI F++ LP  +VMAPSDE EL+ MV T A 
Sbjct: 408 VSIQKLPVRFAIDRAGFVGADGATHAGSFDIVFLATLPEFVVMAPSDEVELMHMVRTAAV 467

Query: 549 IDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARAL 608
            D  P+ FRYPRG  +  DLP  RG  +EIGKG+VL EG  VAL+ +G  +   L A   
Sbjct: 468 YDQGPISFRYPRGEGIGMDLP-QRGEVLEIGKGRVLREGSRVALVCFGTQLSEVLVAADE 526

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLD 668
           L+  GI  TVADARF KPLD  L+R L + H   IT+EEG+IGGFG+HV  F+A + LL+
Sbjct: 527 LAAEGISTTVADARFAKPLDKDLMRRLAREHEVFITIEEGAIGGFGAHVLQFLAQEALLE 586

Query: 669 SGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG-RTREAL 717
            G+K R + LPD Y+ H SP + L+  GL    I     + LG  TR+ L
Sbjct: 587 HGLKVRTLRLPDEYLNHGSPEKILSRVGLDAKGIINAVFTSLGYETRKTL 636


>gi|423711167|ref|ZP_17685487.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella washoensis
           Sb944nv]
 gi|395415081|gb|EJF81516.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella washoensis
           Sb944nv]
          Length = 640

 Score =  582 bits (1501), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 315/647 (48%), Positives = 412/647 (63%), Gaps = 29/647 (4%)

Query: 76  KEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALH 135
           K  TP+LD +  P  L++L   +L QLA E+R+E    VS T   L + L  VELTVALH
Sbjct: 3   KPITPLLDCIRLPQDLRALPQSDLVQLADELRAETIDAVSITGGHLGAGLGVVELTVALH 62

Query: 136 HVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGC 195
           +VF+ P D+I+WDVG QTY HKILTGRR+ I TLR+  G+SG+T RSES YDPF AGH  
Sbjct: 63  YVFNTPDDRIIWDVGHQTYPHKILTGRRNRIRTLRQDGGLSGFTKRSESVYDPFGAGHSS 122

Query: 196 NSVSAGLGMAVARDIKGK-RECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
            S+SAGLGMAVA  +K + R  I+ VI +G   AG AYEAM+NAG LD+ +IVILND+  
Sbjct: 123 TSISAGLGMAVASALKAEERRNIIAVIGDGAMSAGMAYEAMNNAGALDARLIVILNDNDM 182

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+ P           A+S+ L+R+ S  S+R LRE  K +++++ +   + A + +E+AR
Sbjct: 183 SIAP--------PTGAMSAHLARLVSRPSYRNLRERVKILSEKLPKFFLDKARRSEEFAR 234

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAED 374
           G +   G TLF+ELG YY+GP+DGHN+  L+ VL+ V      GPVLVHVVT + +    
Sbjct: 235 GFL--VGGTLFDELGFYYVGPIDGHNLGHLLPVLKNVREYPD-GPVLVHVVTHKGKGYAP 291

Query: 375 TQKSEA---------IEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVH 425
            + S           I   ++  + SN+L       +Y   F +AL+ EA  D  IV + 
Sbjct: 292 AEASSDKYHGVNRFDIVTGKQIKTQSNAL-------SYTKVFSKALIEEASHDDKIVSIT 344

Query: 426 AGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQV 485
           A M     L  F EKFPER FDVG+AEQHAVTF+AG+AC G KPF  I S FLQRAYDQ+
Sbjct: 345 AAMPTGTGLDSFAEKFPERMFDVGIAEQHAVTFAAGIACEGYKPFVAIYSTFLQRAYDQI 404

Query: 486 VNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVAT 545
           ++DV  Q+LPVRF I  AG VG+DG T  G+FDI F++ LP  +VMAPSDE EL+ MV T
Sbjct: 405 IHDVSIQKLPVRFAIDRAGFVGADGATHAGSFDIVFLTTLPEFVVMAPSDEIELMHMVRT 464

Query: 546 VASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKA 605
            A+ D  P+ FRYPRG  V  DLP  RG  +EIGKG+VL EG  +AL+ +GA +   L A
Sbjct: 465 AAAYDQGPISFRYPRGEGVGMDLP-QRGEVLEIGKGRVLREGNRIALVCFGARMTEVLVA 523

Query: 606 RALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDG 665
              L   G+  TVADARF KPLD  L+R L + H  L+T+EEG++GGFG+H+  F+A +G
Sbjct: 524 ADELRAEGLSTTVADARFAKPLDKDLMRRLAREHEVLVTIEEGAMGGFGAHLLQFLAQEG 583

Query: 666 LLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
           LL+ G+K R +  PD Y+ H SP   L+  GL    I  T  + LGR
Sbjct: 584 LLEHGLKVRTLKFPDEYLNHGSPKTVLSRIGLDALGIINTVFTALGR 630


>gi|61656097|gb|AAX49359.1| 1-deoxy-D-xylulose 5-phosphate synthase 1 [Zea mays]
          Length = 481

 Score =  582 bits (1499), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 291/483 (60%), Positives = 354/483 (73%), Gaps = 18/483 (3%)

Query: 249 LNDSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAA 307
           LND++  SL     + P   + ALSS LS++QSS+  R+LREVAKG+TK+IG  +HE AA
Sbjct: 1   LNDNKQVSLPTATLDGPVPPVGALSSALSKLQSSRPLRELREVAKGVTKQIGGSVHELAA 60

Query: 308 KVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTE 367
           KVDEYARGMI   GS+LFEELGLYYIGPVDGHNI+DLI++L +V S  + GPVL+HVVTE
Sbjct: 61  KVDEYARGMISGPGSSLFEELGLYYIGPVDGHNIDDLITILNDVKSTKTTGPVLIHVVTE 120

Query: 368 ENR------RAEDTQKSEAIEKQQEGA---SDSNSLPFGNYSRTYDDCFIEALVMEAEKD 418
           + R      RA D     A      G    S + +L + NY       F EAL+ EAE+D
Sbjct: 121 KGRGYPYAERAADKYHGVAKFDPATGKQFKSPAKTLSYTNY-------FAEALIAEAEQD 173

Query: 419 KDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFL 478
             IV +HA M     L  F  +FP R FDVG+AEQHAVTF+AGLAC GLKPFC I S+FL
Sbjct: 174 SKIVAIHAAMGGGTGLNYFLRRFPSRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFL 233

Query: 479 QRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDE 538
           QR YDQVV+DVD Q+LPVRF +  AGLVG+DGPT CGAFD+ +M+CLPNM+VMAPSDE E
Sbjct: 234 QRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVAYMACLPNMVVMAPSDEAE 293

Query: 539 LVDMVATVASIDDRPVCFRYPRGAIVRTDL-PGYRGIPIEIGKGKVLVEGKDVALLGYGA 597
           L  MVAT A+IDDRP CFRYPRG  V   L P Y+G P+E+GKG++L+EG  VALLGYG+
Sbjct: 294 LCHMVATAAAIDDRPSCFRYPRGNGVGVPLPPNYKGTPLEVGKGRILLEGDRVALLGYGS 353

Query: 598 MVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHV 657
            VQ CL A +L+ + G+ VTVADARFCKPLD  L+R L ++H  LITVEEGSIGGFGSH+
Sbjct: 354 AVQYCLTAASLVQRHGLKVTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHI 413

Query: 658 SHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREAL 717
           + F+ALDGLLD  +KWRP+VLPD YI+H SP  QLA AGLT  HIAA+  ++LG+ REAL
Sbjct: 414 AQFMALDGLLDGKLKWRPLVLPDRYIDHGSPADQLAEAGLTPSHIAASVFNILGQNREAL 473

Query: 718 LLM 720
            +M
Sbjct: 474 AIM 476


>gi|83942135|ref|ZP_00954597.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sulfitobacter sp. EE-36]
 gi|83847955|gb|EAP85830.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sulfitobacter sp. EE-36]
          Length = 646

 Score =  580 bits (1496), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 304/651 (46%), Positives = 410/651 (62%), Gaps = 34/651 (5%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           D+  TP+LD V  P  LK+ +  EL +L+ E+R+E  S VS+T   L + L  VELTVA+
Sbjct: 7   DRPDTPLLDRVNRPADLKNFSDAELVKLSHELRAETISAVSETGGHLGAGLGVVELTVAI 66

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H VF  P DK++WDV  Q Y HKILT RR  I TLR KDG+SG+T RSES YDPF A H 
Sbjct: 67  HSVFDTPKDKLIWDVSHQCYPHKILTERRDRIRTLRMKDGLSGFTKRSESPYDPFGAAHS 126

Query: 195 CNSVSAGLGMAVARDIKGK-RECI---VTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
             S+SA LG +VARD+ G   E +   + VI +G+  AG AYEAM+NAG+L   M VILN
Sbjct: 127 STSISAALGFSVARDLGGNVPEGLGDAIAVIGDGSMSAGMAYEAMNNAGHLKKRMFVILN 186

Query: 251 DSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVD 310
           D+  S+ P         + A+S+ LSR+ + + F+  +  AKG    +     E A +  
Sbjct: 187 DNEMSIAP--------PVGAMSTYLSRLYAEEPFQDFKAAAKGAVSMLPGPFREGAKRAK 238

Query: 311 EYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR 370
           +  +GM    G TLFE+LG  Y+GP+DGH++  L+ VL+ V +  + GPVL+HV+T++ +
Sbjct: 239 DMLKGMA--VGGTLFEQLGFSYLGPIDGHDLNQLLPVLRTVKARAT-GPVLIHVITKKGK 295

Query: 371 ----------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKD 420
                     +   T K   +  +Q+ A  +        + +Y   F ++L+ EA KD  
Sbjct: 296 GYGPAEAARDKGHATAKFNVLTGEQKKAPSN--------APSYTRVFADSLIAEAAKDDK 347

Query: 421 IVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQR 480
           I  V A M     L LF E++P R FDVG+AEQH VTFSAGLA GG+KPFC + S FLQR
Sbjct: 348 ICAVTAAMPDGTGLNLFAERYPSRCFDVGIAEQHGVTFSAGLAAGGMKPFCTMYSTFLQR 407

Query: 481 AYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELV 540
            YDQVV+DV  QRLPVRF I  AGLVG+DG T  GAFD+ F++ LP+ +VMA +DE ELV
Sbjct: 408 GYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGAFDVAFLANLPDFVVMAAADEAELV 467

Query: 541 DMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQ 600
            MVAT A+ DD P+ FR+PRG      +P  RG P+EIGKG+++ EGK VALL +G  + 
Sbjct: 468 HMVATAAAYDDGPIAFRFPRGEGAGVTMP-ERGEPLEIGKGRIIAEGKRVALLSFGTRLS 526

Query: 601 NCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHF 660
              KA   L   GI  T+ADARF KPLD +++  L  +H  LIT+EEG++GGFGSHV+  
Sbjct: 527 EVEKAAEALRAKGITPTIADARFAKPLDREMILSLAADHEALITIEEGAVGGFGSHVAQL 586

Query: 661 IALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
           +A +G+ D+G+K+R +VLPD +I+ ASP    A+AG+   HI A  L +LG
Sbjct: 587 LADEGVFDAGLKYRSMVLPDIFIDQASPADMYAVAGMNAEHIEAKVLDVLG 637


>gi|83953190|ref|ZP_00961912.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sulfitobacter sp.
           NAS-14.1]
 gi|83842158|gb|EAP81326.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sulfitobacter sp.
           NAS-14.1]
          Length = 642

 Score =  580 bits (1495), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 304/651 (46%), Positives = 410/651 (62%), Gaps = 34/651 (5%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           D+  TP+LD V  P  LK+ +  EL +L+ E+R+E  S VS+T   L + L  VELTVA+
Sbjct: 3   DRPDTPLLDRVNRPADLKNFSDAELVKLSHELRAETISAVSETGGHLGAGLGVVELTVAI 62

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H VF  P DK++WDV  Q Y HKILT RR  I TLR KDG+SG+T RSES YDPF A H 
Sbjct: 63  HSVFDTPKDKLIWDVSHQCYPHKILTERRDRIRTLRMKDGLSGFTKRSESPYDPFGAAHS 122

Query: 195 CNSVSAGLGMAVARDIKGK-RECI---VTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
             S+SA LG +VARD+ G   E +   + VI +G+  AG AYEAM+NAG+L   M VILN
Sbjct: 123 STSISAALGFSVARDLGGNVPEGLGDAIAVIGDGSMSAGMAYEAMNNAGHLKKRMFVILN 182

Query: 251 DSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVD 310
           D+  S+ P         + A+S+ LSR+ + + F+  +  AKG    +     E A +  
Sbjct: 183 DNEMSIAP--------PVGAMSTYLSRLYAEEPFQDFKAAAKGAVSMLPGPFREGAKRAK 234

Query: 311 EYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR 370
           +  +GM    G TLFE+LG  Y+GP+DGH++  L+ VL+ V +  + GPVL+HV+T++ +
Sbjct: 235 DMLKGMA--VGGTLFEQLGFSYLGPIDGHDLNQLLPVLRTVKARAT-GPVLIHVITKKGK 291

Query: 371 ----------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKD 420
                     +   T K   +  +Q+ A  +        + +Y   F ++L+ EA KD  
Sbjct: 292 GYGPAEAARDKGHATAKFNVLTGEQKKAPSN--------APSYTRVFADSLIAEAAKDDK 343

Query: 421 IVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQR 480
           I  V A M     L LF E++P R FDVG+AEQH VTFSAGLA GG+KPFC + S FLQR
Sbjct: 344 ICAVTAAMPDGTGLNLFAERYPSRCFDVGIAEQHGVTFSAGLAAGGMKPFCTMYSTFLQR 403

Query: 481 AYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELV 540
            YDQVV+DV  QRLPVRF I  AGLVG+DG T  GAFD+ F++ LP+ +VMA +DE ELV
Sbjct: 404 GYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGAFDVAFLANLPDFVVMAAADEAELV 463

Query: 541 DMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQ 600
            MVAT A+ DD P+ FR+PRG      +P  RG P+EIGKG+++ EGK VALL +G  + 
Sbjct: 464 HMVATAAAYDDGPIAFRFPRGEGAGVTMP-ERGEPLEIGKGRIIAEGKRVALLSFGTRLS 522

Query: 601 NCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHF 660
              KA   L   GI  T+ADARF KPLD +++  L  +H  LIT+EEG++GGFGSHV+  
Sbjct: 523 EVEKAAEALRAKGITPTIADARFAKPLDREMILSLAADHEALITIEEGAVGGFGSHVAQL 582

Query: 661 IALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
           +A +G+ D+G+K+R +VLPD +I+ ASP    A+AG+   HI A  L +LG
Sbjct: 583 LADEGVFDAGLKYRSMVLPDIFIDQASPADMYAVAGMNAEHIEAKVLDVLG 633


>gi|365899110|ref|ZP_09437031.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein
           [Bradyrhizobium sp. STM 3843]
 gi|365420205|emb|CCE09573.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein
           [Bradyrhizobium sp. STM 3843]
          Length = 618

 Score =  580 bits (1494), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 294/624 (47%), Positives = 409/624 (65%), Gaps = 15/624 (2%)

Query: 96  IKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYA 155
           +++++Q+A E+R E    VS T     + L  VELT A+H+VF  P D+++WDVG Q Y 
Sbjct: 1   MEQVRQVADELRQETIDAVSVTGGHFGAGLGVVELTTAIHYVFDTPRDRLIWDVGHQAYP 60

Query: 156 HKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRE 215
           HKILTGRR  I TLR   G+SG+T R+ES+YDPF A H   S+SAGLGMAVARD+ G   
Sbjct: 61  HKILTGRRDRIRTLRTGGGLSGFTKRTESDYDPFGAAHSSTSISAGLGMAVARDLSGGTN 120

Query: 216 CIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKIEESPKTSINALSSTL 275
            ++ VI +G   AG AYEAM+NAG ++S +IVILND+  S+ P         + A+S+ L
Sbjct: 121 NVIAVIGDGAMSAGMAYEAMNNAGAMNSRLIVILNDNDMSIAP--------PVGAMSAYL 172

Query: 276 SRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGP 335
           SR+ S K++R LRE AK + + + + +   A++V+EY+RG +   G TLFEELG YY+GP
Sbjct: 173 SRLYSGKTYRTLREAAKQLGQHLPKVIANRASRVEEYSRGFM-MDGGTLFEELGFYYVGP 231

Query: 336 VDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRR---AEDTQKSEAIEKQQEGASDSN 392
           +DGHN++ L+ VL+ V  +   GP+LVHVVT++ +    AE +        + + A+ + 
Sbjct: 232 IDGHNLDHLLPVLKNVRDM-ETGPILVHVVTQKGKGYPPAEASADKYHAVAKFDVATGTQ 290

Query: 393 SLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAE 452
           +    N +  Y + F ++LV +AEKD  I+ + A M     + +F + FP+R FDVG+AE
Sbjct: 291 AKAKPN-APQYQNVFGQSLVKQAEKDDKIIGITAAMPSGTGIDIFAKAFPKRTFDVGIAE 349

Query: 453 QHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPT 512
           QHAVTF+AGLA  G KPFC I S FLQR YDQVV+DV  Q LPVRF I  AGLVG+DG T
Sbjct: 350 QHAVTFAAGLAAEGYKPFCAIYSTFLQRGYDQVVHDVAIQSLPVRFAIDRAGLVGADGAT 409

Query: 513 QCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYPRGAIVRTDLPGYR 572
             G+FD  ++ CLPNM++MA SDE ELV MVAT   I+DRP   RYPRG     ++P   
Sbjct: 410 HAGSFDNAYLGCLPNMVIMAASDEAELVHMVATQVVINDRPSAVRYPRGEGRGVEMPEV- 468

Query: 573 GIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLV 632
           G+P+E+GKG+++ +GK +ALL +G  +  C KA   L+  G+  ++ADARF KPLD +LV
Sbjct: 469 GVPLEVGKGRMIRQGKQIALLSFGTRLAECEKAADELAAQGLSTSIADARFMKPLDEELV 528

Query: 633 RELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQL 692
            +L ++H  LIT+EEGS+GGFGSHV  ++A  G+LD G+K R +VLPD +++H +P    
Sbjct: 529 LKLARDHEILITIEEGSVGGFGSHVMQYLADQGMLDGGLKMRAMVLPDEFLDHDTPAAMY 588

Query: 693 ALAGLTGHHIAATALSLLGRTREA 716
             AGL    I       LG+  +A
Sbjct: 589 GRAGLDAKGIVRKVFEALGKDYKA 612


>gi|395766960|ref|ZP_10447498.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella doshiae NCTC
           12862]
 gi|395415572|gb|EJF82006.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella doshiae NCTC
           12862]
          Length = 640

 Score =  580 bits (1494), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 309/640 (48%), Positives = 407/640 (63%), Gaps = 21/640 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD +  P  L++L   +L QLA E+R E    VS T   L + L  VELT+ALH+VF
Sbjct: 6   TPLLDCICFPQDLRALPESDLVQLADELRVETIDAVSVTGGHLGAGLGVVELTIALHYVF 65

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+I+WDVG Q Y HKILTGRR  I TLR++DG+SG+T RSES YDPF AGH   S+
Sbjct: 66  NTPEDRIIWDVGHQAYPHKILTGRRDRIRTLRQEDGLSGFTKRSESVYDPFGAGHSSTSI 125

Query: 199 SAGLGMAVARDIKGK-RECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLH 257
           SAGLGMAVA  +K + R  ++ VI +G   AG AYEAM+NAG LD+ +IVILND+  S+ 
Sbjct: 126 SAGLGMAVASALKAEMRRNVIAVIGDGAMSAGMAYEAMNNAGALDARLIVILNDNDMSIA 185

Query: 258 PKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMI 317
           P           A+S+ L+R+ S  S+R LRE  K  ++++ +   + A + +E+AR   
Sbjct: 186 P--------PTGAMSAHLARLVSRPSYRNLRERVKMFSEKLPKFFLDKARRSEEFARSFF 237

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQK 377
              G TLF+ELG YY+GP+DGHN+  L+ VL+ V    + GPVLVH+VT    + +    
Sbjct: 238 --VGGTLFDELGFYYVGPIDGHNLNHLLPVLKNVREYPN-GPVLVHIVTH---KGKGYAP 291

Query: 378 SEAIEKQQEGASD-----SNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
           +EA   +  G +         +   + + +Y   F +AL+ EA  D  IV + A M    
Sbjct: 292 AEASSDKYHGVNSFDIVTGKQIKIQSNALSYTKVFSKALIEEASHDDKIVGITAAMPTGT 351

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            L  F EKFPER FDVG+AEQHAVTF+AG+AC G KPF  I S FLQRAYDQ+++DV  Q
Sbjct: 352 GLDSFAEKFPERMFDVGIAEQHAVTFAAGIACEGYKPFVAIYSTFLQRAYDQIIHDVSIQ 411

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
           +LPVRF I  AG VG+DG T  G+FDI F++ LP  +VMAPSDE EL+ MV T A+ D  
Sbjct: 412 KLPVRFAIDRAGFVGADGATHAGSFDIVFLTTLPEFVVMAPSDEVELMHMVRTAAAYDQG 471

Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
           P+ FRYPRG  +  DLP  RG  +EIGKG+VL EG  +AL+ +G  +   L A   L   
Sbjct: 472 PISFRYPRGEGIGLDLP-QRGELLEIGKGRVLREGNRIALICFGTRMSEVLSAADALVVE 530

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 672
           G+  TVADARF KPLD  L+R L + H  L+T+EEG+IGGFG+H+  F   +GLL+ G+K
Sbjct: 531 GLSTTVADARFAKPLDKDLMRRLAREHEVLVTIEEGAIGGFGAHLLQFFVQEGLLERGLK 590

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
            R + LPD Y+ H SP + LA  GL    I  T L+ LGR
Sbjct: 591 VRTLKLPDEYLNHGSPEKVLARVGLDAVGIVNTVLTALGR 630


>gi|374341514|gb|AEZ35185.1| 1-deoxy-D-xylulose 5-phosphate synthase-I [Botryococcus braunii]
          Length = 770

 Score =  580 bits (1494), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 309/663 (46%), Positives = 420/663 (63%), Gaps = 40/663 (6%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP LD V+ P  LKS    ELK +  E+R+E+ + VS T   L SSL  VELTVA+H+VF
Sbjct: 83  TPYLDKVKVPAHLKSFRKDELKTVCRELRAEIINAVSATGGHLGSSLGVVELTVAIHYVF 142

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P DK++WDVG Q Y HKILTGRR  +HT+R++DG+SG+T+RSESEYD F AGH   S+
Sbjct: 143 DCPEDKLVWDVGHQAYGHKILTGRRDKMHTIRQRDGLSGFTNRSESEYDAFGAGHSSTSI 202

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSN-----------MIV 247
           SA LGMAV RD+ GK    + VI +G    G AYEA+++AG+L S             IV
Sbjct: 203 SAALGMAVGRDLLGKDNHCIAVIGDGAITGGMAYEALNHAGFLGSEKIQGKGNNIGRTIV 262

Query: 248 ILNDSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWA 306
           ILND++  SL  +     +  + AL+  LS++ S    +QL   AK + K++   +    
Sbjct: 263 ILNDNQQVSLPTQFNGEKQKPVGALADALSQVAS----KQLSNSAKEIVKQLPEPLQAVG 318

Query: 307 AKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVT 366
            ++++    + G   +T F+ELG+ ++GP+DGHN+EDL++VL+ + S    GPV+VH++T
Sbjct: 319 GQLEKVVSTIGG--NNTFFDELGVAHVGPIDGHNVEDLVNVLEWIKSQKDGGPVIVHILT 376

Query: 367 EEN------RRAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKD 420
           E+        +A D     A      G    +S    +Y+ TY   F ++L+ EAE+D  
Sbjct: 377 EKGYGYEFAEKASDRMHGVAKYDVTSGKQVKSSSKVASYT-TY---FADSLIAEAERDGR 432

Query: 421 IVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQR 480
           ++ +HA M     +  F ++FP+R FDVG+AEQHAVTF+AGLAC GL P C I S+FLQR
Sbjct: 433 VIGIHAAMGGGTGMNRFAKRFPKRTFDVGIAEQHAVTFAAGLACEGLIPMCAIYSSFLQR 492

Query: 481 AYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELV 540
           AYDQV++DV  Q LPVRF +  AGLVG+DG T  G  D+T+M+C+PNMIVMAPS+E EL 
Sbjct: 493 AYDQVIHDVALQNLPVRFAMDRAGLVGADGATHSGFADVTYMACVPNMIVMAPSNEAELC 552

Query: 541 DMVATVASIDDRPVCFRYPRGAIVRTDL------PGYRGIPIEIGKGKVLVEGK------ 588
           + VAT  +ID  P CFR+PRG  +  DL      P ++G P EIGKGK+   G       
Sbjct: 553 NAVATSIAIDFAPSCFRFPRGNGIGVDLAEYGVQPNFKGTPWEIGKGKIRRNGSNNKPEG 612

Query: 589 DVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEG 648
           DVALLGYG +V +CL A  +L   GI  TVAD RFCKPLD +L+ +L +NH  +ITVEE 
Sbjct: 613 DVALLGYGTVVNDCLAAAEMLEAQGIKTTVADMRFCKPLDEELIVQLAKNHPVVITVEEN 672

Query: 649 SIGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALS 708
           ++GGF SHV HF+   G LD  +K R ++LPD +IEH +  QQL  A LT + I  TA++
Sbjct: 673 TVGGFASHVLHFMTEQGFLDGKMKLRTLLLPDRFIEHGTQQQQLEEALLTANDIVETAVN 732

Query: 709 LLG 711
            LG
Sbjct: 733 ALG 735


>gi|49473998|ref|YP_032040.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella quintana str.
           Toulouse]
 gi|81647185|sp|Q6G0D4.1|DXS_BARQU RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|49239501|emb|CAF25854.1| 1-deoxyxylulose-5-phosphate synthase [Bartonella quintana str.
           Toulouse]
          Length = 640

 Score =  579 bits (1493), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 316/641 (49%), Positives = 409/641 (63%), Gaps = 23/641 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD +  P  L++L   +L +LA E+R+E    VS T   L + L  VELTVALH+VF
Sbjct: 6   TPLLDRICLPQDLRALPESDLVRLADELRTETIDAVSVTGGHLGAGLGVVELTVALHYVF 65

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+I+WDVG QTY HKILTGRR  I TLR++ G+SG+T RSES YDPF AGH   S+
Sbjct: 66  NTPEDRIIWDVGHQTYPHKILTGRRDRIRTLRQEGGLSGFTKRSESVYDPFGAGHSSTSI 125

Query: 199 SAGLGMAVARDIKG-KRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLH 257
           SAGLGM VA  +K  KR  I+ VI +G   AG AYEAM+NAG LD+ +IVILND+  S+ 
Sbjct: 126 SAGLGMTVASALKAEKRRNIIAVIGDGAMSAGMAYEAMNNAGALDARLIVILNDNDMSIA 185

Query: 258 PKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMI 317
           P           A+S+ L+R+ S  ++R LRE  K  +K++ +   + A + +E+ARG +
Sbjct: 186 P--------PTGAMSAHLARLVSRPAYRSLRERIKMFSKKMPKFFLDKARRSEEFARGFL 237

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQK 377
              G TLF+ELG YY+GP+DGHN++ L+ VL+ V    + GPVLVHVVT + +       
Sbjct: 238 --VGGTLFDELGFYYVGPIDGHNLKHLLPVLKNVREYPN-GPVLVHVVTHKGK---GYAP 291

Query: 378 SEAIEKQQEGASDSNSLPFGNYSRT------YDDCFIEALVMEAEKDKDIVVVHAGMEMD 431
           +EA   +  G  +S  +  G   +T      Y   F +AL+ EA  D  IV + A M   
Sbjct: 292 AEASSDKYHGV-NSFDVVTGKQIKTQSNALAYTKVFSKALIEEATHDNKIVGITAAMPTG 350

Query: 432 LSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQ 491
             L  F EKFPER FDVG+AEQHAVTF+AG+AC G KPF  I S FLQRAYDQV++DV  
Sbjct: 351 TGLDAFAEKFPERMFDVGIAEQHAVTFAAGMACEGYKPFVAIYSTFLQRAYDQVIHDVSI 410

Query: 492 QRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDD 551
           Q+LPVRF I  AG VG+DG T  G+FDI F++ LP  +VMAPSDE EL+ MV T A+ D 
Sbjct: 411 QKLPVRFAIDRAGFVGADGATHAGSFDIVFLATLPEFVVMAPSDEVELMHMVRTAAAYDQ 470

Query: 552 RPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSK 611
            P+ FRYPRG  V  DLP  RG  +EIGKG+VL EG  VAL+ +G  +   L A   L  
Sbjct: 471 GPISFRYPRGEGVGMDLP-QRGELLEIGKGRVLREGSRVALVCFGTRMSEVLVAADALIA 529

Query: 612 LGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGV 671
            G+  TVADARF KPLD  L+R L   H  L+ VEEG+IGGFG+H+  F+A +GLL+ G+
Sbjct: 530 EGLSTTVADARFAKPLDKDLMRRLACEHEVLVAVEEGAIGGFGAHLLQFLAKEGLLEHGL 589

Query: 672 KWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
           K R +  PD Y+ H SP + L+  GL    I  T  + LGR
Sbjct: 590 KVRTLKFPDEYLNHGSPEKVLSRIGLDAVGIVNTVFTALGR 630


>gi|240850082|ref|YP_002971475.1| 1-deoxy-D-xylulose-5-phosphate synthase Dxs [Bartonella grahamii
           as4aup]
 gi|240267205|gb|ACS50793.1| 1-deoxy-D-xylulose-5-phosphate synthase Dxs [Bartonella grahamii
           as4aup]
          Length = 635

 Score =  579 bits (1492), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 312/645 (48%), Positives = 413/645 (64%), Gaps = 31/645 (4%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD +  P  L++L   +L QLA E+R+     VS T   L + L  VELTVALH++F
Sbjct: 6   TPLLDHICFPQDLRALPESDLVQLADELRTATIDAVSVTGGHLGAGLGVVELTVALHYIF 65

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+I+WDVG QTY HKILTGRR  I TLR++ G+SG+T RSES YDPF AGH   S+
Sbjct: 66  NTPEDRIIWDVGHQTYPHKILTGRREKIRTLRQEGGLSGFTKRSESVYDPFGAGHSSTSI 125

Query: 199 SAGLGMAVARDIKGK-RECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLH 257
           SAGLGMAVA  +K + R  I+ VI +G   AG AYEAM+NAG LD+ +IV+LND+  S+ 
Sbjct: 126 SAGLGMAVASALKAETRRNIIAVIGDGAMSAGMAYEAMNNAGALDARLIVVLNDNDMSIA 185

Query: 258 PKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMI 317
           P           A+S+ L+R+ S  S+R LRE  K +++++ +   + A + +E+ARG++
Sbjct: 186 P--------PTGAMSAHLARLVSRPSYRHLRERVKMLSEKLPKFFLDKARRSEEFARGLL 237

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR------- 370
              G TLF+ELG YY+GP+DGHN+  L+ VL+ V    S GPVLVHVVT + +       
Sbjct: 238 --VGGTLFDELGFYYLGPIDGHNLGHLLPVLKNVREYPS-GPVLVHVVTHKGKGYPPAEA 294

Query: 371 ---RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAG 427
              +     + +    +Q  AS SN LP       Y   F +AL+ EA  D  IV + A 
Sbjct: 295 SPDKYHGVNRFDVTTGKQVKAS-SNILP-------YTKVFSKALIEEARHDDKIVGITAA 346

Query: 428 MEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVN 487
           M     L  F +KFPE+ FDVG+AEQHAVTF+AGLAC G KPF  I S FLQRAYDQ+++
Sbjct: 347 MPTGTGLDSFAKKFPEKMFDVGIAEQHAVTFAAGLACEGYKPFVAIYSTFLQRAYDQIIH 406

Query: 488 DVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVA 547
           DV  Q+LPVRF I  AG VG+DG T  G+FDI F+S LP  +VMAPSDE EL+ MV T A
Sbjct: 407 DVSIQKLPVRFAIDRAGFVGADGATHAGSFDIVFLSTLPGFVVMAPSDELELMHMVRTAA 466

Query: 548 SIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARA 607
           + D  P+ FRYPRG  +  DLP  RG  +EIGKG+VL EG  +AL+ +G  +   L+A  
Sbjct: 467 AYDQGPISFRYPRGEGIGIDLP-QRGELLEIGKGRVLREGNRIALVCFGTRMSEVLQAAD 525

Query: 608 LLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLL 667
            L   G+  TVADARF KPLD  L+  L + H  L+T+EEG+IGGFG+H+  F+A +GLL
Sbjct: 526 ALEAEGLSTTVADARFAKPLDKDLMCRLAREHEVLVTIEEGAIGGFGAHILQFLAQEGLL 585

Query: 668 DSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
           + G+K R + LPD Y+ H +P + L+  GL    I  T  + LGR
Sbjct: 586 EHGLKARTLKLPDEYLNHGAPEKVLSRIGLDAMGIVNTVFAALGR 630


>gi|163867874|ref|YP_001609078.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella tribocorum CIP
           105476]
 gi|189027767|sp|A9IQP2.1|DXS_BART1 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|161017525|emb|CAK01083.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella tribocorum CIP
           105476]
          Length = 635

 Score =  578 bits (1491), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 312/645 (48%), Positives = 413/645 (64%), Gaps = 31/645 (4%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V  P  L++L    L QLA E+R+E    VS T   L + L  VELTVALH++F
Sbjct: 6   TPLLDRVCFPQDLRALPESYLVQLANELRTETIDAVSVTGGHLGAGLGVVELTVALHYIF 65

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+I+WDVG QTY HKILTGRR  I TLR++ G+SG+T R ES YDPF AGH   S+
Sbjct: 66  NTPEDRIIWDVGHQTYPHKILTGRREKIRTLRQEGGLSGFTKRVESVYDPFGAGHSSTSI 125

Query: 199 SAGLGMAVARDIKG-KRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLH 257
           SAGLGMAVA  +K  K+  ++ VI +G   AG AYEAM+NAG L++ +IVILND+  S+ 
Sbjct: 126 SAGLGMAVASALKEEKKRKVIAVIGDGAMSAGMAYEAMNNAGALNARLIVILNDNDMSIA 185

Query: 258 PKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMI 317
           P           ++S+ L+R+ S  S+R LRE  K +++++ +   + A + +E+ARG++
Sbjct: 186 P--------PTGSMSAHLARLVSRPSYRHLRERVKMLSEKLPKFFWDKARRSEEFARGLL 237

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR------- 370
              G TLF+ELG YY+GP+DGHN+  L+ VL+ V      GPVLVHVVT + +       
Sbjct: 238 --VGGTLFDELGFYYVGPIDGHNLGHLLPVLKNVREY-PHGPVLVHVVTHKGKGYPPAEA 294

Query: 371 ---RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAG 427
              +     + +    +Q  AS SN LP       Y   F +ALV EA  D  IV + A 
Sbjct: 295 SSDKYHGVNRFDVTTGKQVKAS-SNILP-------YTKVFSKALVEEACHDDKIVGITAA 346

Query: 428 MEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVN 487
           M     L  F EKFPE+ FDVG+AEQHAVTF+AGLAC G KPF  I S FLQRAYDQ+++
Sbjct: 347 MPTGTGLDSFAEKFPEKMFDVGIAEQHAVTFAAGLACEGYKPFVAIYSTFLQRAYDQIIH 406

Query: 488 DVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVA 547
           DV  Q+LPVRF I  AG VG+DG T  G+FDI F++ LP  +VMAPSDE EL+ MV T A
Sbjct: 407 DVSIQKLPVRFAIDRAGFVGADGATHAGSFDIVFLATLPEFVVMAPSDELELMHMVRTAA 466

Query: 548 SIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARA 607
           + D  P+ FRYPRG  +  DLP  RG  +EIGKG+VL EG  +AL+ +G  +   L+A  
Sbjct: 467 AYDQGPISFRYPRGEGIGIDLP-QRGEILEIGKGRVLREGNRIALVCFGTRMSEVLRAAD 525

Query: 608 LLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLL 667
            L   G+  TVADARF KPLD  L+R L + H  L+T+EEG+IGGFG+H+  F+A +GLL
Sbjct: 526 RLGAKGLSTTVADARFAKPLDKDLMRRLAREHEVLVTIEEGAIGGFGAHLLQFLAQEGLL 585

Query: 668 DSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
           + G+K R +  PD Y+ H SP + L+  GL    I  T L+++GR
Sbjct: 586 EHGLKVRTLKFPDEYLNHGSPEKVLSTIGLDAMGIVNTVLTVVGR 630


>gi|119383154|ref|YP_914210.1| 1-deoxy-D-xylulose-5-phosphate synthase [Paracoccus denitrificans
           PD1222]
 gi|119372921|gb|ABL68514.1| 1-deoxy-D-xylulose-5-phosphate synthase [Paracoccus denitrificans
           PD1222]
          Length = 640

 Score =  578 bits (1489), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 312/646 (48%), Positives = 408/646 (63%), Gaps = 28/646 (4%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           D+  TPILD V  P  LK LT +EL+QLA E+R+E  S VS T   L + L  VELTVAL
Sbjct: 7   DRPSTPILDRVHLPSDLKDLTDRELRQLADELRAETVSAVSVTGGHLGAGLGVVELTVAL 66

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H VF AP DKI+WDVG Q Y HKILTGRR  I TLR + G+SG+T RSES YDPF AGH 
Sbjct: 67  HAVFDAPRDKIIWDVGHQCYPHKILTGRRDRIRTLRMEGGLSGFTKRSESPYDPFGAGHS 126

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA LG A+AR++ G     + VI +G   AG A+EA++NAG L   + V+LND+  
Sbjct: 127 STSISAALGFAMARELGGDPGDAIAVIGDGAMSAGMAFEALNNAGDLGKRLFVVLNDNEM 186

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+ P           ALS  L+R+ +   F+ L+ VAKG    +   + E A +  E  +
Sbjct: 187 SIAP--------PTGALSRYLTRLYAEGPFQDLKAVAKGAVGFLPPTLQEGARRAKEMLK 238

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---- 370
           GM    G TLFEELG  YIGPVDGH+++ L+ +L+ V +  + GPVL+HVVT + +    
Sbjct: 239 GMT--VGGTLFEELGFSYIGPVDGHDLDQLLPLLRTVKARAT-GPVLLHVVTRKGKGYGP 295

Query: 371 --RAEDTQKSEA---IEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVH 425
             RA D   + A   +E   +  + SN+        +Y   F  ALV +A +D  IV V 
Sbjct: 296 AERAADKGHATAKFDVETGAQAKAKSNA-------PSYTSVFARALVDQASRDARIVAVT 348

Query: 426 AGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQV 485
           A M     L L  E+FP R FDVG+AEQHAVTFSAGLA GG+KPFC + S FLQR YDQV
Sbjct: 349 AAMPDGTGLNLMAERFPRRCFDVGIAEQHAVTFSAGLAAGGMKPFCALYSTFLQRGYDQV 408

Query: 486 VNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVAT 545
           V+DV  QRLPVRF I  AGLVG+DG T  GA+D+ F++ LP M+VMA +DE ELV MVAT
Sbjct: 409 VHDVAIQRLPVRFAIDRAGLVGADGATHAGAYDVAFLANLPGMVVMAAADEAELVHMVAT 468

Query: 546 VASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKA 605
            A+ D+ P+ FRYPRG     ++P  RG  + IGKG+V+ EGK VA+L +G  +   ++A
Sbjct: 469 AAAHDEGPIAFRYPRGEGTGVEMP-ERGEVLVIGKGRVMAEGKGVAILSFGTRLSEVMRA 527

Query: 606 RALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDG 665
           R  L+  G+  TV DARF KPLD  L+  L + H  LIT+EEG++GGFGS V+  +A +G
Sbjct: 528 RESLAARGVSPTVVDARFAKPLDRDLILRLARTHEALITIEEGAVGGFGSLVAQLLADEG 587

Query: 666 LLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
           + D G+++R +VLPD +I+HASP      A ++   I A  L +LG
Sbjct: 588 VFDGGLRFRQMVLPDTFIDHASPEAMYREARMSAPDIEAKVLEVLG 633


>gi|254485860|ref|ZP_05099065.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseobacter sp. GAI101]
 gi|214042729|gb|EEB83367.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseobacter sp. GAI101]
          Length = 642

 Score =  577 bits (1488), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 305/647 (47%), Positives = 405/647 (62%), Gaps = 26/647 (4%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           D+  TP+LD V+ P  LK  +  EL +L+ E+R+E  S VS+T   L + L  VELTVA+
Sbjct: 3   DRPETPLLDQVDRPADLKRFSDAELVKLSHELRAETISAVSETGGHLGAGLGVVELTVAI 62

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H +F  P DK++WDVG Q Y HKILT RR  I TLR KDG+SG+T RSES YDPF A H 
Sbjct: 63  HAIFDTPRDKLIWDVGHQCYPHKILTERRDRIRTLRMKDGLSGFTKRSESPYDPFGAAHS 122

Query: 195 CNSVSAGLGMAVARDIKG----KRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
             S+SA LG AVARD+ G         + VI +G+  AG AYEAM+NAG L   MIVILN
Sbjct: 123 STSISAALGFAVARDLGGVVPEGLGDAIAVIGDGSMSAGMAYEAMNNAGDLQKRMIVILN 182

Query: 251 DSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVD 310
           D+  S+ P         + A+S+ LSR+ + + F++ + VAKG    +     E A +  
Sbjct: 183 DNEMSIAP--------PVGAMSAYLSRLYAEEPFQEFKAVAKGAVSMLPGPFREGAKRAK 234

Query: 311 EYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR 370
           +  +GM    G TLFE+LG  YIGP+DGH++  L+ VL+ V +  + GP L+HV+T   +
Sbjct: 235 DMLKGMT--VGGTLFEQLGFSYIGPIDGHDLNQLLPVLRTVKARAT-GPTLIHVIT---K 288

Query: 371 RAEDTQKSEAIEKQQEGASDSNSLPFGNYSR------TYDDCFIEALVMEAEKDKDIVVV 424
           + +    +EA   +    S  N L  G   +      +Y   F + L+ EA +D  I  V
Sbjct: 289 KGKGYGPAEAARDKGHATSKFNVLT-GEQKKAPSNAPSYTRVFADTLIAEAARDDKICAV 347

Query: 425 HAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQ 484
            A M     L LF E++P R FDVG+AEQH VTFSA LA GG+KPFC + S FLQR YDQ
Sbjct: 348 TAAMPDGTGLNLFAERYPSRCFDVGIAEQHGVTFSAALAAGGMKPFCTMYSTFLQRGYDQ 407

Query: 485 VVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVA 544
           VV+DV  QRLPVRF I  AGLVG+DG T  GAFD+ F++ LP  +VMA +DE ELV MVA
Sbjct: 408 VVHDVAIQRLPVRFAIDRAGLVGADGATHAGAFDVAFLANLPGFVVMAAADEAELVHMVA 467

Query: 545 TVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLK 604
           T A+ DD P+ FR+PRG     D+P  RG+P+EIGKG+++ EGK VALL +G  +    K
Sbjct: 468 TAAAHDDGPIAFRFPRGEGNGVDMP-ERGVPLEIGKGRIITEGKRVALLSFGTRLAEVEK 526

Query: 605 ARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALD 664
           A   L   GI  T+ADARF KPLD +++  L   H  LIT+EEG++GGFGSHV+  ++ +
Sbjct: 527 AAEALRAKGITPTIADARFAKPLDREMILSLAAEHEALITIEEGAVGGFGSHVAQLLSDE 586

Query: 665 GLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
           G+ D G+K+R +VLPD +I+ ASP    A+AG+    I A  L +LG
Sbjct: 587 GVFDVGLKYRSMVLPDTFIDQASPEDMYAVAGMNAEQIEAKVLDVLG 633


>gi|395781816|ref|ZP_10462227.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella
           rattimassiliensis 15908]
 gi|395420471|gb|EJF86747.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella
           rattimassiliensis 15908]
          Length = 635

 Score =  577 bits (1488), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 309/640 (48%), Positives = 410/640 (64%), Gaps = 21/640 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V  P  L++L   +L QLA E+R+E    VS T   L + L  VELTVALH+VF
Sbjct: 6   TPLLDRVHFPQDLRALPESDLVQLADELRAETIDAVSVTGGHLGAGLGVVELTVALHYVF 65

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+I+WDVG QTY HKILTGRR  I TLR++ G+SG+T RSES YDPF AGH   S+
Sbjct: 66  NTPEDRIIWDVGHQTYPHKILTGRREKIRTLRQEGGLSGFTKRSESVYDPFGAGHSSTSI 125

Query: 199 SAGLGMAVARDIKG-KRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLH 257
           SAGLGMAVA  ++  KR  ++ VI +G   AG AYEAM+NAG LD+ +IV+LND+  S+ 
Sbjct: 126 SAGLGMAVASALRAEKRRNVIAVIGDGAMSAGMAYEAMNNAGALDARLIVVLNDNDMSIA 185

Query: 258 PKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMI 317
           P           A+S+ L+R+ S  S+R LRE  K +++++ +   + A + +  ARG++
Sbjct: 186 P--------PTGAMSAHLARLVSRPSYRHLRERVKLLSEKLPKFFLDKARRSEGIARGLL 237

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQK 377
              G TLF ELG YY+GP+DGHN+E L+ VL+ +      GPVLVHV+T + +       
Sbjct: 238 --VGGTLFNELGFYYVGPIDGHNLEHLLPVLKNIREC-PKGPVLVHVITHKGK---GYPP 291

Query: 378 SEAIEKQQEGA-----SDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
           +EA   +  G      +    +   +   +Y   F +AL+ EA  D  I+ + A M    
Sbjct: 292 AEASFDKYHGVNRFDITTGKQVKVSSNILSYTKVFSKALLEEACHDDKIIGITAAMPTGT 351

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            L  F EKFPE+ FDVG+AEQHAVTF+AGLAC G KPF  I S FLQRAYDQ+++DV  Q
Sbjct: 352 GLDSFAEKFPEKMFDVGIAEQHAVTFAAGLACEGYKPFVAIYSTFLQRAYDQIIHDVSIQ 411

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
           +LPVRF I  AG VG+DG T  G+FDI F++ LP  IVMAPSDE EL+ MV T A+ D  
Sbjct: 412 KLPVRFAIDRAGFVGADGATHAGSFDIVFLATLPEFIVMAPSDELELMHMVRTAAAYDQG 471

Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
           P+ FRYPRG  +  DLP  RG  +EIGKG++L EG  +AL+ +GA +   L+A   L   
Sbjct: 472 PISFRYPRGEGMGIDLP-QRGELLEIGKGRILREGNRIALVCFGARMSEVLQAADALEAE 530

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 672
           G+  TVADARF KPLD  L+R L   H  L+T+EEG+IGGFG+H+  F+A +GLL+ G+K
Sbjct: 531 GLSTTVADARFAKPLDKDLMRRLAYEHEVLVTIEEGAIGGFGAHILQFLAQEGLLEHGLK 590

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
            R + LPD Y+ H SP + L+  GL    I  T  + LGR
Sbjct: 591 VRTLKLPDKYLNHGSPEKVLSRVGLDAIGILNTVFTTLGR 630


>gi|403530265|ref|YP_006664794.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella quintana RM-11]
 gi|403232337|gb|AFR26080.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella quintana RM-11]
          Length = 636

 Score =  577 bits (1488), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 315/641 (49%), Positives = 409/641 (63%), Gaps = 23/641 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD +  P  L++L   +L +LA E+R+E    VS T   L + L  VELTVALH+VF
Sbjct: 2   TPLLDRICLPQDLRALPESDLVRLADELRTETIDAVSVTGGHLGAGLGVVELTVALHYVF 61

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+I+WDVG QTY HKILTGRR  I TLR++ G+SG+T RSES YDPF AGH   S+
Sbjct: 62  NTPEDRIIWDVGHQTYPHKILTGRRDRIRTLRQEGGLSGFTKRSESVYDPFGAGHSSTSI 121

Query: 199 SAGLGMAVARDIKG-KRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLH 257
           SAGLGM VA  +K  KR  I+ VI +G   AG AYEAM+NAG LD+ +IVILND+  S+ 
Sbjct: 122 SAGLGMTVASALKAEKRRNIIAVIGDGAMSAGMAYEAMNNAGALDARLIVILNDNDMSIA 181

Query: 258 PKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMI 317
           P           A+S+ L+R+ S  ++R LRE  K  +K++ +   + A + +E+ARG +
Sbjct: 182 P--------PTGAMSAHLARLVSRPAYRSLRERIKMFSKKMPKFFLDKARRSEEFARGFL 233

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQK 377
              G TLF+ELG YY+GP+DGHN++ L+ VL+ V    + GPVLVHVVT + +       
Sbjct: 234 --VGGTLFDELGFYYVGPIDGHNLKHLLPVLKNVREYPN-GPVLVHVVTHKGK---GYAP 287

Query: 378 SEAIEKQQEGASDSNSLPFGNYSRT------YDDCFIEALVMEAEKDKDIVVVHAGMEMD 431
           +EA   +  G  +S  +  G   +T      Y   F +AL+ EA  D  IV + A M   
Sbjct: 288 AEASSDKYHGV-NSFDVVTGKQIKTQGNALAYTKVFSKALIEEATHDNKIVGITAAMPTG 346

Query: 432 LSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQ 491
             L  F EKFPER FDVG+AEQHAVTF+AG+AC G KPF  I S FLQRAYDQ+++DV  
Sbjct: 347 TGLDAFAEKFPERMFDVGIAEQHAVTFAAGMACEGYKPFVAIYSTFLQRAYDQIIHDVSI 406

Query: 492 QRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDD 551
           Q+LPVRF I  AG VG+DG T  G+FDI F++ LP  +VMAPSDE EL+ MV T A+ D 
Sbjct: 407 QKLPVRFAIDRAGFVGADGATHAGSFDIVFLATLPEFVVMAPSDEVELMHMVRTAAAYDQ 466

Query: 552 RPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSK 611
            P+ FRYPRG  V  DLP  RG  +EIGKG+VL EG  VAL+ +G  +   L A   L  
Sbjct: 467 GPISFRYPRGEGVGMDLP-QRGELLEIGKGRVLREGSRVALVCFGTRMSEVLVAADALIA 525

Query: 612 LGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGV 671
            G+  TVADARF KPLD  L+R L   H  L+ VEEG+IGGFG+H+  F+A +GLL+ G+
Sbjct: 526 EGLSTTVADARFAKPLDKDLMRRLACEHEVLVAVEEGAIGGFGAHLLQFLAKEGLLEHGL 585

Query: 672 KWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
           K R +  PD Y+ H SP + L+  GL    I  T  + LGR
Sbjct: 586 KVRTLKFPDEYLNHGSPEKVLSRIGLDAVGIVNTVFTALGR 626


>gi|83312003|ref|YP_422267.1| 1-deoxy-D-xylulose-5-phosphate synthase [Magnetospirillum
           magneticum AMB-1]
 gi|118595587|sp|Q2W367.1|DXS_MAGMM RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|82946844|dbj|BAE51708.1| Deoxyxylulose-5-phosphate synthase [Magnetospirillum magneticum
           AMB-1]
          Length = 644

 Score =  577 bits (1487), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 312/645 (48%), Positives = 408/645 (63%), Gaps = 20/645 (3%)

Query: 76  KEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALH 135
           K  + +LD V +P  ++  +I+EL+QL  E+R E+   VS T   L + L   ELTVALH
Sbjct: 9   KPSSSLLDRVSSPADIRDFSIEELEQLTYEVRQEMIQSVSFTGGHLGAGLGVAELTVALH 68

Query: 136 HVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGC 195
           H+F  P D+++WDVG Q Y HKILTGRR  + T+R+  G+SG+T RSESEYDPF AGH  
Sbjct: 69  HIFDTPRDRLIWDVGHQAYPHKILTGRRGRMRTMRQGGGLSGFTRRSESEYDPFGAGHSS 128

Query: 196 NSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHS 255
            S+SA LGMAVARD+KG    ++ VI +G   AGQAYEAM+NAG   S +IVILND+  S
Sbjct: 129 TSISAALGMAVARDLKGATNNVIAVIGDGAMSAGQAYEAMNNAGAAGSRLIVILNDNDMS 188

Query: 256 LHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARG 315
           + P         + ALS+ LSR+ SS S+  LR + K +   +   +     + +EYARG
Sbjct: 189 IAPP--------VGALSAHLSRLLSSPSYHSLRHLVKDLAHLLPPSLERAVGRAEEYARG 240

Query: 316 MIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDT 375
           M+   G TLFEELG YY+GP+DGHN E L+ VL+ +       PV++HVVT++ R     
Sbjct: 241 MVS-GGGTLFEELGFYYVGPIDGHNFEHLLPVLKNLRDSDDTKPVMLHVVTKKGR---GY 296

Query: 376 QKSEAIEKQQEGASDSNSL------PFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGME 429
             +EA   +  G    + L      P  N + +Y   F +AL+ EAE D  +V + A M 
Sbjct: 297 PPAEAAADKYHGVGRFDVLTGQLEKPKAN-APSYTSVFAKALIAEAEVDDRVVAITAAMP 355

Query: 430 MDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDV 489
               L  F ++FP R FDVG+AEQHAVTF+ GLA  G KPFC I S+FLQRAYDQV +DV
Sbjct: 356 GGTGLDKFGDRFPARTFDVGIAEQHAVTFAGGLATEGFKPFCAIYSSFLQRAYDQVQHDV 415

Query: 490 DQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASI 549
             Q+LPVRF I  AGLVG+DG T  G++D+ F+ CLP++++M PSDE +L+  VAT  SI
Sbjct: 416 VLQKLPVRFAIDRAGLVGADGATHAGSYDMAFLGCLPDIVIMCPSDEADLMHAVATAVSI 475

Query: 550 DDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALL 609
           DDRP  FRYPRG  V  +L   RG  + IGKG+V+ EG  VA+L  G  +   LKA   L
Sbjct: 476 DDRPSAFRYPRGEGVGIEL-SERGSVMPIGKGRVVREGNRVAILSLGTRLAEALKAADEL 534

Query: 610 SKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDS 669
           +  G+  TV DARF KPLD +L+  L + H  LITVEEGS+GGFGSHV H +A  G LD+
Sbjct: 535 AARGLAPTVVDARFMKPLDEELILRLAREHEVLITVEEGSVGGFGSHVLHLLASKGALDN 594

Query: 670 GVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTR 714
           G+K RP+ LPD ++EH +P  Q    GL    I AT L+ LG  R
Sbjct: 595 GLKVRPLALPDVFVEHDAPAIQYEKIGLNASGIVATVLATLGEAR 639


>gi|262277462|ref|ZP_06055255.1| 1-deoxy-D-xylulose-5-phosphate synthase [alpha proteobacterium
           HIMB114]
 gi|262224565|gb|EEY75024.1| 1-deoxy-D-xylulose-5-phosphate synthase [alpha proteobacterium
           HIMB114]
          Length = 636

 Score =  577 bits (1486), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 300/634 (47%), Positives = 397/634 (62%), Gaps = 27/634 (4%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD +  P  L+S   K+L  LA E+R E+   VS T   L + L  VELT+A+H+VF
Sbjct: 4   TPLLDKINYPHDLRSFDKKDLTTLAKELREEMIDAVSVTGGHLGAGLGVVELTLAIHYVF 63

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKI+TGRR  I TLR+  G+SG+T RSESEYDPF   H   S+
Sbjct: 64  DTPKDRLIWDVGHQAYPHKIITGRRDRIRTLRQGGGLSGFTKRSESEYDPFGTAHSSTSI 123

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGM+VARD+ GK   I++VI +G   AG AYEAM+NAG +DS +IVILND+  S+ P
Sbjct: 124 SAGLGMSVARDLDGKTNNIISVIGDGAMSAGMAYEAMNNAGSMDSRLIVILNDNDMSIAP 183

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                    + A+SS L+++ S   +   RE  K ++ +  + + +   + +EY RG+  
Sbjct: 184 --------PVGAMSSYLAKLLSGNKYIGFREFFKKLSNKFPKSLKKSIGQAEEYLRGL-- 233

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRR---AEDT 375
             G TLFEE+G +Y+G VDGHN + L+ VL+ V +    GP L+H +TE+ +    AED+
Sbjct: 234 AVGGTLFEEMGFFYVGTVDGHNFDHLLPVLENVKNSKHEGPFLIHAITEKGKGYKPAEDS 293

Query: 376 QKSE------AIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGME 429
           +          +E  ++  S SN +P      +Y   F E L   AEKD  IV V A M 
Sbjct: 294 KDRYHGVTKFNVETGEQSKSKSN-IP------SYTSVFGETLTKHAEKDSKIVTVTAAMP 346

Query: 430 MDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDV 489
               + +FQ KFP+R FDVG+AEQHAVTF+AGLA  G KP+  I S FLQRAYDQVV+DV
Sbjct: 347 SGTGVNIFQNKFPKRSFDVGIAEQHAVTFAAGLATEGYKPYAAIYSTFLQRAYDQVVHDV 406

Query: 490 DQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASI 549
             Q+LPVRF I  AGLVG+DG T  GAFDIT++S LPN IVMA SDE ELV M+ T   I
Sbjct: 407 AIQKLPVRFAIDRAGLVGADGSTHAGAFDITYLSTLPNFIVMAASDEAELVRMINTSVEI 466

Query: 550 DDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALL 609
           +D P  FRYPRG  V  +LP      IEIGKG+++ EG  V +L +G  ++ C  A   L
Sbjct: 467 NDTPCAFRYPRGNGVGLELPDINET-IEIGKGRIIQEGSTVCILNFGTRLEECKIAAKQL 525

Query: 610 SKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDS 669
              GI  T+ DARF KPLD  L+    + H  +IT+EEGSIGGFGSHVSH ++  G  D 
Sbjct: 526 DSKGITTTIVDARFAKPLDQDLILRCAREHEMIITIEEGSIGGFGSHVSHLLSEKGFFDK 585

Query: 670 GVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIA 703
           G+K+R + LPD +I+  +P +   +AGL    IA
Sbjct: 586 GLKFRSMTLPDIFIDQDTPEKMYDIAGLNAKQIA 619


>gi|182678782|ref|YP_001832928.1| 1-deoxy-D-xylulose-5-phosphate synthase [Beijerinckia indica subsp.
           indica ATCC 9039]
 gi|229813261|sp|B2IDK3.1|DXS_BEII9 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|182634665|gb|ACB95439.1| deoxyxylulose-5-phosphate synthase [Beijerinckia indica subsp.
           indica ATCC 9039]
          Length = 642

 Score =  576 bits (1485), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 309/643 (48%), Positives = 415/643 (64%), Gaps = 18/643 (2%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD +  P  L+ L   +L QLA E+R+E    VS T   L + L  VELTVALH+VF
Sbjct: 7   TPLLDTIATPTDLRRLKESDLAQLADELRTETIDAVSVTGGHLGAGLGVVELTVALHYVF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR  I TLR+  G+SG+T RSES YDPF   H   S+
Sbjct: 67  DTPHDRLIWDVGHQAYPHKILTGRRDRIRTLRRAGGLSGFTKRSESVYDPFGTAHSSTSI 126

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMA A  + G    ++ VI +G+  AG AYEAM+NAG + S +I+ILND+  S+ P
Sbjct: 127 SAGLGMAAATTLSGGNNNVIAVIGDGSMSAGMAYEAMNNAGAMHSRLIIILNDNEMSIAP 186

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      ALS+ L+R+ S  ++R +RE AK + + +   +++ A K +E+AR    
Sbjct: 187 PA--------GALSAYLARLVSGGTYRTVREAAKQLGRHLPHFIYDRARKTEEFARNFWA 238

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR----RAED 374
             G T+FEELG+YY+GP+DGHN++ L+ VL+ V      GP+LVHVVT++ +     A  
Sbjct: 239 --GGTMFEELGIYYVGPIDGHNLDHLLPVLKNVRDFKETGPILVHVVTQKGKGYAPAAAA 296

Query: 375 TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
           + K  ++    +  +   + P  N + +Y   F +ALV EAE+D  IV + A M     L
Sbjct: 297 SDKYHSV-NTFDVVTGVQTKPKAN-APSYTRVFADALVKEAERDDKIVAITAAMPGGTGL 354

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
            +F + FPER FDVG+AEQHAVTF+AGLA  G +PFC + S FLQR YDQVV+DV  Q L
Sbjct: 355 DVFGKAFPERTFDVGIAEQHAVTFAAGLATEGYRPFCALYSTFLQRGYDQVVHDVAIQNL 414

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PVRF I  AGLVG+DG T  G+FD++++  LPNM++MA +DE ELV MVAT A+ D+ P+
Sbjct: 415 PVRFAIDRAGLVGADGATHAGSFDVSYLGILPNMVIMAAADEAELVHMVATAAAYDEGPI 474

Query: 555 CFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGI 614
            FRYPRG  V  +LP    I ++IG+G+++ EG  VALL  G  +    KA   L+  GI
Sbjct: 475 AFRYPRGEGVGIELPQIGEI-LDIGRGRIVREGTTVALLSLGTRLAEASKAAEQLASYGI 533

Query: 615 DVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLD-SGVKW 673
            VTVADARF KPLD+ LVR L +NH  LIT+EEGS+GGFGS V   +A +GLLD +G+K+
Sbjct: 534 SVTVADARFAKPLDLDLVRRLAKNHEVLITIEEGSVGGFGSFVMQALAEEGLLDGTGLKF 593

Query: 674 RPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREA 716
           R +VLPD +++H  P +  A AGL    I A  L+ LGR  EA
Sbjct: 594 RSMVLPDTFLDHDKPEKLYAQAGLDAKGIVAKVLATLGRENEA 636


>gi|304321304|ref|YP_003854947.1| 1-deoxy-D-xylulose-5-phosphate synthase [Parvularcula bermudensis
           HTCC2503]
 gi|303300206|gb|ADM09805.1| 1-deoxy-D-xylulose-5-phosphate synthase [Parvularcula bermudensis
           HTCC2503]
          Length = 638

 Score =  576 bits (1485), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 298/637 (46%), Positives = 401/637 (62%), Gaps = 20/637 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V  P  L++L   +L Q A E+R+E+   VS T   L + L  VELT ALH+VF
Sbjct: 5   TPLLDKVTLPQDLRALERSQLTQFADELRAEVIDAVSVTGGHLGAGLGVVELTTALHYVF 64

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P DKI+WDVG Q Y HKILTGRR  I TLR+KDG+SG+T R+ESEYDPF A H   S+
Sbjct: 65  DTPTDKIIWDVGHQCYPHKILTGRRDRIRTLRQKDGLSGFTKRTESEYDPFGAAHAATSI 124

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LGMAVARD++G    +V VI +G+  AG AYEAM+NAG     + VILND+  S+ P
Sbjct: 125 SAALGMAVARDLRGDVNRVVAVIGDGSMSAGMAYEAMNNAGDRGKQLTVILNDNDMSIAP 184

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                    + A+S+ L+R+ SS  +   R +AK + KR+ +G++  A K +EY R  + 
Sbjct: 185 --------PVGAMSAYLARVASSDKYHAFRNLAKQLAKRLPKGLYTSAEKFEEYGRAFV- 235

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G T+FEELG YY+GP+DGHN++ L+ VL+ V  L +  PV+VHVVT++ +       +
Sbjct: 236 -TGGTMFEELGFYYVGPIDGHNLDHLVPVLENVREL-TDAPVMVHVVTQKGK---GYAPA 290

Query: 379 EAIEKQQEGASDSNSLPFGNY-----SRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
           E+   +  G +  + +    +     + +Y   F   L+ EAE+D+ +V + A M     
Sbjct: 291 ESAADKYHGVAKFDVVSGKQHKPKPAAPSYTSVFAGQLIKEAERDERVVGITAAMPSGTG 350

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           +  F E+FP+R FDVG+AEQHAVTF+AGLA  G+ PF  I S FLQRAYD VV+DV  Q 
Sbjct: 351 IDKFMERFPDRTFDVGIAEQHAVTFAAGLAAEGMVPFAAIYSTFLQRAYDSVVHDVALQN 410

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPVRF +  AGLVG+DG T  GAFDI ++ CLPNM++MA  DE ELV M  T A+ D+ P
Sbjct: 411 LPVRFALDRAGLVGADGATHAGAFDIAYLGCLPNMVLMAAGDEAELVHMTHTAAAFDEHP 470

Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
           + FR+PRG     +LP    + +EIG+G++L EG  VAL+ YG  +  CLKA  LL   G
Sbjct: 471 IAFRFPRGEGQGLELPLTPQL-LEIGRGRILREGAKVALIAYGGRLAECLKAADLLGMRG 529

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKW 673
           +  TV DARF KPLD  L+  +  +H  ++TVEEGS+GGFG+ V HF+A  G LD G+K 
Sbjct: 530 LSTTVVDARFAKPLDEDLIARVAADHEVVLTVEEGSMGGFGAAVLHFLARIGQLDKGLKI 589

Query: 674 RPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
           R + LPD Y + A P    A A L   +IA  A+   
Sbjct: 590 RTLTLPDTYQDQAKPADMYAEAKLQAENIADAAIVFF 626


>gi|126730372|ref|ZP_01746183.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sagittula stellata E-37]
 gi|126709105|gb|EBA08160.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sagittula stellata E-37]
          Length = 649

 Score =  576 bits (1485), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 312/663 (47%), Positives = 411/663 (61%), Gaps = 33/663 (4%)

Query: 66  LPDI-DDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSS 124
           +PD   D   ++  TP+LD V NP  LK  +  ELK++A E+R E  S VS+T   L + 
Sbjct: 1   MPDTTSDTRPNRPETPLLDRVHNPADLKQFSDAELKRVAQELREETISTVSETGGHLGAG 60

Query: 125 LAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSES 184
           L  +ELTVALH VF AP DKI+WDV  Q Y HKILTGRR  I TLR+KDG+SG+T RSES
Sbjct: 61  LGVIELTVALHSVFDAPRDKIIWDVSHQCYPHKILTGRRDRIRTLRQKDGLSGFTKRSES 120

Query: 185 EYDPFNAGHGCNSVSAGLGMAVARDIKGKREC----IVTVISNGTTMAGQAYEAMSNAGY 240
            YDPF A H   S+SA LG AVARD+ G  +      + VI +G   AG A+EA++NAG+
Sbjct: 121 PYDPFGAAHSSTSISAALGFAVARDLGGACDTGHGDAIAVIGDGAMSAGMAFEALNNAGH 180

Query: 241 LDSNMIVILNDSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGR 300
           L   +IVILND+  S+ P           ALSS L+R+ +   F  L+  AKG    +  
Sbjct: 181 LKKRLIVILNDNEMSIAP--------PTGALSSYLTRLYAEAPFHDLKAAAKGAVSLLPE 232

Query: 301 GMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPV 360
              E A +  E  +GM    G TLFEELG  Y+GP+DGH+++ L+ VL+ V +  + GP+
Sbjct: 233 PFREGAKRAKEMLKGMA--VGGTLFEELGFSYLGPIDGHDLDQLLPVLRTVKARAT-GPI 289

Query: 361 LVHVVTEENR------RAEDTQKSEA---IEKQQEGASDSNSLPFGNYSRTYDDCFIEAL 411
           L+H +T + +       A D   + A   +   ++  S SN+        +Y   F EAL
Sbjct: 290 LIHALTRKGKGYSHAEHAADKGHARAKFDVVTGEQKKSPSNA-------PSYTKVFAEAL 342

Query: 412 VMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFC 471
           + EA +D  I  V A M     L LF E++P R FDVG+AEQH VTFSAGLA GG++PFC
Sbjct: 343 MQEAAEDSRICAVTAAMPDGTGLDLFAERYPSRCFDVGIAEQHGVTFSAGLAAGGMRPFC 402

Query: 472 IIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVM 531
            + S FLQR YDQVV+DV  QRLPVRF I  AGLVG+DG T  G++D+ ++S LP  +VM
Sbjct: 403 AMYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGSYDVAYLSNLPGFVVM 462

Query: 532 APSDEDELVDMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVA 591
           A +DE EL  MVAT A+ D+ P+ FRYPRG     ++P  RG+P++IG G+V+ EG  VA
Sbjct: 463 AAADEAELKHMVATAAAHDEGPIAFRYPRGEGEGVEMP-VRGVPLQIGVGRVMREGTRVA 521

Query: 592 LLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIG 651
           +L +G  +   +KA   L   G+ VTVADARF KPLD  LV  L + H  LITVEEG++G
Sbjct: 522 ILSFGTRLGESIKAAEALEARGVSVTVADARFAKPLDRDLVLRLAREHEALITVEEGAVG 581

Query: 652 GFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
           GFGSHV+  +A +G+ D G+K+R +VLPD +I+ ASP    A+A L    I A  LS LG
Sbjct: 582 GFGSHVAQLLAEEGVFDRGLKYRSMVLPDIFIDQASPRDMYAVAQLNAEDIEAKVLSALG 641

Query: 712 RTR 714
             R
Sbjct: 642 VER 644


>gi|340030106|ref|ZP_08666169.1| 1-deoxy-D-xylulose-5-phosphate synthase [Paracoccus sp. TRP]
          Length = 641

 Score =  576 bits (1485), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 311/639 (48%), Positives = 405/639 (63%), Gaps = 22/639 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V  P  LK+L+ +EL+QLA E+R+E  S VS T   L + L  VELTVALH VF
Sbjct: 12  TPVLDRVTLPSDLKNLSDRELRQLADELRAETISAVSVTGGHLGAGLGVVELTVALHAVF 71

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
            AP DKI+WDVG Q Y HKILTGRR  I TLR + G+SG+T RSES YDPF AGH   S+
Sbjct: 72  EAPRDKIIWDVGHQCYPHKILTGRRDRIRTLRMEGGLSGFTKRSESPYDPFGAGHSSTSI 131

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LG A+AR++ G     V VI +G   AG A+EA++NAG L   + V+LND+  S+ P
Sbjct: 132 SAALGFAMARELGGDPGDAVAVIGDGAMSAGMAFEALNNAGDLGKRLFVVLNDNEMSIAP 191

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      ALS  L+R+ +   F+ L+ VAKG    + + + E A +  E  +GM  
Sbjct: 192 --------PTGALSRYLTRLYAEGPFQDLKAVAKGAVGFLPQPLQEGARRAKEMLKGMT- 242

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR------RA 372
             G TLFEELG  YIGPVDGH+++ L+ +L+ V +    GPVL+HVVT + +      RA
Sbjct: 243 -VGGTLFEELGFSYIGPVDGHDLDQLLPLLRTVRARAD-GPVLIHVVTRKGKGYAPAERA 300

Query: 373 EDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
            D   + A    Q GA         + + +Y   F +ALV EA +D  IV V A M    
Sbjct: 301 ADKGHATAKFDVQTGAQAKAK----SNAPSYTSVFAKALVDEASRDARIVAVTAAMPDGT 356

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            L LF E+FP R FDVG+AEQHAVTFSAGLA GG+KPFC + S FLQR YDQ+V+DV  Q
Sbjct: 357 GLNLFAERFPRRCFDVGIAEQHAVTFSAGLAAGGMKPFCALYSTFLQRGYDQIVHDVAIQ 416

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
           RLPVRF I  AGLVG+DG T  GA+DI F+S LP M+VMA +DE ELV MVAT A+ D  
Sbjct: 417 RLPVRFAIDRAGLVGADGATHAGAYDIAFLSNLPGMVVMAAADEAELVHMVATAAAYDAG 476

Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
           P+ FRYPRG     ++P + G  +EIGKG+V+ EG+ VA+L +G  +   ++AR  L   
Sbjct: 477 PIAFRYPRGEGTGVEMPEH-GEVLEIGKGRVVAEGRGVAILSFGTRLAEVMRAREALLVR 535

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 672
           GI  T+ DARF KPLD  L+  L   H  LIT+EEG++GGFGS V+  ++ +G+ D G++
Sbjct: 536 GIQPTIVDARFAKPLDRDLILRLACTHEALITIEEGAVGGFGSLVAQLLSDEGVFDGGLR 595

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
           +R +VLPD +I+HASP      A ++   I A  L +LG
Sbjct: 596 FRQMVLPDTFIDHASPEAMYREARMSAPDIEAKVLEILG 634


>gi|227821074|ref|YP_002825044.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sinorhizobium fredii
           NGR234]
 gi|227340073|gb|ACP24291.1| 1-deoxy-D-xylulose 5-phosphate synthase [Sinorhizobium fredii
           NGR234]
          Length = 645

 Score =  576 bits (1485), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 305/639 (47%), Positives = 407/639 (63%), Gaps = 20/639 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V  P  LK +  ++L QLA E+RSE+   VS+T   L + L  VELT+A+H VF
Sbjct: 12  TPLLDKVNVPDDLKKIDDRDLPQLASELRSEMIDAVSRTGGHLGAGLGVVELTIAIHKVF 71

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D++++DVG Q Y HKILTGRR  I TLR++ G+SG+T R+ESEYDPF A H   S+
Sbjct: 72  DTPHDRLIFDVGHQCYPHKILTGRRDRIRTLRQEGGLSGFTRRAESEYDPFGAAHSSTSI 131

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVA D+ GK   ++ VI +G   AG AYEA++NAG LD+ +IVILND+  S+ P
Sbjct: 132 SAGLGMAVAADLDGKSRNVIAVIGDGALSAGMAYEALNNAGALDARLIVILNDNDMSIAP 191

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S+ L+R+ S +++  +REV K +T  +G+ +     +  E+ARG + 
Sbjct: 192 --------PTGAMSAYLARLASGRTYMGIREVGKKLTAYLGKTVDRAITRAVEHARGYV- 242

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G TLFEE+G Y+IGP+DGH+ + L+ VL+ V      GPVL+HVVT++ +       +
Sbjct: 243 -TGGTLFEEMGFYHIGPIDGHSFDHLLPVLRNVRD-NRRGPVLIHVVTQKGK---GYPPA 297

Query: 379 EAIEKQQEGASDSNSLPFGNY-----SRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
           EA   +  G +  + +          +  Y   F +AL  EA  D  IV + A M     
Sbjct: 298 EAAADKYHGVNKFDVITGAQAKAKPNAPAYTSVFADALTQEASLDDKIVAITAAMPHGTG 357

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L  F    P R FDVG+AEQHAVTF+AGLA  G KPF  + S FLQRAYDQVV+DV  Q 
Sbjct: 358 LDRFAAVHPSRCFDVGIAEQHAVTFAAGLAAEGYKPFAALYSTFLQRAYDQVVHDVAIQG 417

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPVRF I  AG VG+DGPT  G+FD T+++ LP  +VMA +DE EL  MV T A+ DD P
Sbjct: 418 LPVRFPIDRAGFVGADGPTHAGSFDTTYLASLPGFVVMAAADEAELKHMVRTAAAYDDGP 477

Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
           + FRYPRG  V  +LP  RG  +EIGKG+++ +G  VALL +G  + +CL A   L   G
Sbjct: 478 ISFRYPRGEGVGVELP-ERGEILEIGKGRIIKQGTKVALLSFGTRLADCLLAAEDLDAAG 536

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKW 673
           +  TVADARF KPLD +L+R+L ++H  LIT+EEG+IGGF SHV HF+A +GLLD G+K 
Sbjct: 537 LSTTVADARFAKPLDHELIRQLARHHEVLITIEEGAIGGFASHVLHFLAEEGLLDGGLKV 596

Query: 674 RPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
           RP+VLPD ++E A P    A AGL    I +T    LG+
Sbjct: 597 RPMVLPDIWMEQAKPESMYAAAGLDRVGIVSTVFKALGQ 635


>gi|84685989|ref|ZP_01013885.1| 1-deoxy-D-xylulose-5-phosphate synthase [Maritimibacter
           alkaliphilus HTCC2654]
 gi|84666082|gb|EAQ12556.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacterales bacterium
           HTCC2654]
          Length = 648

 Score =  576 bits (1484), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 299/648 (46%), Positives = 415/648 (64%), Gaps = 30/648 (4%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           +K  TP+LD + +P  ++ L++ E++QLA E+R+E    VSKT   L + L  VELTVA+
Sbjct: 9   EKPATPLLDRIASPADMRGLSVAEMRQLADELRAETIYSVSKTGGHLGAGLGVVELTVAI 68

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H +F  P DK++WDV  Q Y HKILTGRR  + ++R+KDG+SG+T R+ES YDPF A H 
Sbjct: 69  HAIFDTPHDKLIWDVSHQCYPHKILTGRRDRMTSIRQKDGLSGFTKRTESPYDPFGAAHS 128

Query: 195 CNSVSAGLGMAVARDIKGKRE-----CIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVIL 249
             S+SA LG AVARD+ G  E     CI  VI +G   AG A+EAM+NAG+L+  +IV+L
Sbjct: 129 STSISAALGFAVARDLGGSPENGIGDCIA-VIGDGAMSAGMAFEAMNNAGHLNKRLIVVL 187

Query: 250 NDSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKV 309
           ND+  S+ P         + ALS+ LSR+ + + F++ +  AKG  + +     E A + 
Sbjct: 188 NDNEMSIAP--------PVGALSTYLSRLYAGEPFQEFKAAAKGAVRLLPPPFQEGARRA 239

Query: 310 DEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN 369
            E  +GM    G T+FEELG  Y+GP+DGH+++ L  VL+ V +  + GPVL+H +T   
Sbjct: 240 KEMLKGMT--VGGTMFEELGFSYVGPIDGHDMDQLAQVLRTVKARAT-GPVLIHAIT--- 293

Query: 370 RRAEDTQKSEAIEKQQEG-ASDSNSLPFGNYSR------TYDDCFIEALVMEAEKDKDIV 422
           R+ +  + +E  E+  +G A+    +P G   +      +Y   F + L    E D  IV
Sbjct: 294 RKGKGYRPAE--ERDDKGHATAKFDVPTGKQHKAPSNAPSYTSVFGKTLTKLGETDDKIV 351

Query: 423 VVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAY 482
            V A M     + +F  +FP R FDVG+AEQH VTFSAGLA GG++PFC I S FLQR Y
Sbjct: 352 AVTAAMPDGTGVDIFGARFPSRTFDVGIAEQHGVTFSAGLAAGGMRPFCAIYSTFLQRGY 411

Query: 483 DQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDM 542
           DQVV+DV  QRLPVRF+I  AGLVG+DG T  G+FDI +++ LP+ ++MAPSDE ELV+M
Sbjct: 412 DQVVHDVAIQRLPVRFMIDRAGLVGADGATHAGSFDIAYLANLPDFVIMAPSDEAELVNM 471

Query: 543 VATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNC 602
           + T   IDDRP   RYPRGA V T++P      +EIGKG+++ EGK VA L  G  +   
Sbjct: 472 IETARGIDDRPSAVRYPRGAGVGTEMP-ETPTALEIGKGRIVAEGKRVAFLSLGPRLTEV 530

Query: 603 LKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIA 662
            KA  +L+  GI  T+ADARF KPLD  ++ +L + H  LIT+EEG+IGGFGSHV+  +A
Sbjct: 531 HKAAEMLTAKGITPTIADARFAKPLDEDMILKLAREHEVLITIEEGAIGGFGSHVAQLLA 590

Query: 663 LDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
            +G+ DSG+K+R +VLPD +I+ A+P Q   +AGLT   + A  +S L
Sbjct: 591 ENGVFDSGLKFRSMVLPDTFIDQATPDQMYEVAGLTADDMVAKVMSAL 638


>gi|114569400|ref|YP_756080.1| 1-deoxy-D-xylulose-5-phosphate synthase [Maricaulis maris MCS10]
 gi|122316501|sp|Q0ARE5.1|DXS_MARMM RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|114339862|gb|ABI65142.1| 1-deoxy-D-xylulose-5-phosphate synthase [Maricaulis maris MCS10]
          Length = 643

 Score =  575 bits (1483), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 303/640 (47%), Positives = 403/640 (62%), Gaps = 24/640 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TPILD V +P  LK+L +  LK LA E+R+E    VS T   L + L  VELT ALHHVF
Sbjct: 7   TPILDTVNSPADLKNLPLDRLKSLADEVRAETIDAVSVTGGHLGAGLGVVELTTALHHVF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D ++WDVG Q Y HKILTGRR  I TLR+  G+SG+T RSESEYDPF A H   S+
Sbjct: 67  DTPTDTLIWDVGHQCYPHKILTGRRDRIRTLRQPGGLSGFTKRSESEYDPFGAAHASTSI 126

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LG AV RD+K +   ++ VI +G+  AG AYEAM+NAG++   +IVILND+  S+ P
Sbjct: 127 SAALGFAVGRDLKDENRNVIAVIGDGSMSAGMAYEAMNNAGHIGGRLIVILNDNDMSIAP 186

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                    + A+S   +R+ SS+ +R +R++ KG+ K +   + E A + +EY RGM  
Sbjct: 187 --------PVGAMSHYFARLVSSQRYRSIRKLGKGVAKAL--RVEEAARRAEEYMRGM-- 234

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G TLFEE+G  Y+GP+DGH+++ L+ VL+ V   G  GPVL+HVVT++ +       +
Sbjct: 235 AMGGTLFEEMGFRYVGPIDGHDLDQLVPVLRNVRD-GDNGPVLIHVVTQKGK---GYAPA 290

Query: 379 EAIEKQQEGASDSNSLPFGNYSR------TYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
           EA + +  G +  N +  G   +      +Y   F + L+ EAE D  +V V A M    
Sbjct: 291 EASDDKYHGVAKFNVIT-GEQQKSKAAAPSYTKVFAQQLIREAEADSRVVGVTAAMPGGT 349

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            L LF E+FP+R FDVG+AEQHAVTF+AGLA  G+KPF  I S FLQR YDQVV+DV  Q
Sbjct: 350 GLDLFGERFPDRMFDVGIAEQHAVTFAAGLAADGMKPFAAIYSTFLQRGYDQVVHDVAIQ 409

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
           +LPVRF I  AGLVG+DG T  G+FDI ++  LP M++MA +DE EL  MV T A IDD 
Sbjct: 410 KLPVRFAIDRAGLVGADGATHAGSFDIGYLGALPGMVLMAAADELELSRMVKTAALIDDG 469

Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
           P  FRYPRG     ++P  +  P+EIGKG+++ EG  +A+L  G  ++  LKA   L+  
Sbjct: 470 PSAFRYPRGNGTGIEIPD-QIEPLEIGKGRIVREGSRIAILSLGTRLEESLKAADALAAQ 528

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 672
           G   TVADARF KPLD  L+  L + H  LITVEEG++GGFG+ V H +A  G LD G++
Sbjct: 529 GFSTTVADARFAKPLDEDLILRLAREHEVLITVEEGAVGGFGAFVLHMLADKGALDRGLR 588

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
            R + LPD + +  +P      AGL   HIAA AL  +G+
Sbjct: 589 IRTLTLPDVFQDQEAPFDMYETAGLNARHIAAKALEAMGK 628


>gi|319405367|emb|CBI78984.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella sp. AR 15-3]
          Length = 640

 Score =  575 bits (1483), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 311/651 (47%), Positives = 413/651 (63%), Gaps = 31/651 (4%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LDL+  P  L+ L   +L QLA E+R+E  + VS T   L + L  VELT+ALH+VF
Sbjct: 6   TPLLDLIHLPQDLRVLPESDLPQLAHELRAETINAVSVTGGHLGAGLGVVELTIALHYVF 65

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+I+WDVG QTY HKILTGRR  I TLR++ G+SG+T RSES YDPF AGH   S+
Sbjct: 66  NTPDDRIIWDVGHQTYPHKILTGRRDRIRTLRQEGGLSGFTKRSESVYDPFGAGHSSTSI 125

Query: 199 SAGLGMAVARDIKGK-RECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLH 257
           SAGLGMA+   ++ + R  I++VI +G   AG AYEAM+NAG LD+ +IVILND+  S+ 
Sbjct: 126 SAGLGMAIVSALEAEERRNIISVIGDGAISAGMAYEAMNNAGALDARLIVILNDNDMSI- 184

Query: 258 PKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMI 317
                SP     A+S+ L+R+ S  S+R LRE  K ++K++ +   E A   +E+AR   
Sbjct: 185 ----ASPT---GAMSAHLARLVSRPSYRNLRERIKILSKKLPKFFLEKARYSEEFARSFF 237

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR------- 370
              G TLF+ELG YY+GP+DGHN   L+ VL+ V    + GPVLVHVVT + +       
Sbjct: 238 --VGGTLFDELGFYYVGPIDGHNFGHLLPVLKNVRECPN-GPVLVHVVTHKGKGYPPAEA 294

Query: 371 ---RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAG 427
              +     + + I  +Q  A  SNSL       +Y   F +AL+ EA+ D  I+ + A 
Sbjct: 295 SSDKYHGVNRFDVITGKQVKAQ-SNSL-------SYTKVFSQALIEEAQHDNKIIGITAA 346

Query: 428 MEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVN 487
           M     L  F EKFP+R FDVG+AEQHAVTF+AG+AC G KPF  I S FLQRAYDQ+++
Sbjct: 347 MPNGTGLDFFSEKFPKRMFDVGIAEQHAVTFAAGIACEGYKPFVAIYSTFLQRAYDQIIH 406

Query: 488 DVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVA 547
           DV  Q+LPVRF I  AG VG+DG T  G+FDI F++ LP+ +VMAPSDE EL+ MV T A
Sbjct: 407 DVSLQKLPVRFAIDRAGFVGADGATHAGSFDIVFLTTLPDFVVMAPSDELELMHMVRTAA 466

Query: 548 SIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARA 607
           + D  P+ FRYPRG  +  DLP  RG  +EIGKG+VL EG  +AL+ +G  +   L A  
Sbjct: 467 AYDQGPISFRYPRGEGIGMDLP-QRGEVLEIGKGRVLCEGSKIALVCFGTRLSEVLIAAD 525

Query: 608 LLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLL 667
            L   G+  TVADARF KPLD  L+R L + H  L+T+EEG++GGFG+H+  F+A +GLL
Sbjct: 526 ELVAEGLSTTVADARFAKPLDKDLMRRLAREHEVLVTIEEGAVGGFGAHLLQFLAQEGLL 585

Query: 668 DSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALL 718
           + G+K R +  PD Y+ H S  +  +  GL    I  T  S LGR    +L
Sbjct: 586 EHGLKVRTLKFPDEYLNHGSLNKVFSQIGLDATGIINTVFSALGRKLRPIL 636


>gi|418054734|ref|ZP_12692790.1| 1-deoxy-D-xylulose-5-phosphate synthase [Hyphomicrobium
           denitrificans 1NES1]
 gi|353212359|gb|EHB77759.1| 1-deoxy-D-xylulose-5-phosphate synthase [Hyphomicrobium
           denitrificans 1NES1]
          Length = 647

 Score =  575 bits (1483), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 300/632 (47%), Positives = 401/632 (63%), Gaps = 20/632 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V  P  L+ LT  +L QLA E+R+E    VS T   L + L  VELTVALH++F
Sbjct: 11  TPLLDRVNTPDDLRKLTESDLPQLAAELRTETIDAVSVTGGHLGAGLGVVELTVALHYLF 70

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDV  QTY HKILT RR  I TLR+ +G+SG+T R+ESEYDPF A H   S+
Sbjct: 71  DTPRDRLIWDVSHQTYPHKILTARRDRIRTLRQANGLSGFTKRTESEYDPFGAAHSSTSI 130

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVARD+ G    +V VI +G   AG AYEA++NAG  +  +IV+LND+  S+ P
Sbjct: 131 SAGLGMAVARDMSGGDNNVVCVIGDGAMSAGMAYEALNNAGARNERLIVVLNDNDMSIAP 190

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      ALSS L+R  SS S+ ++R++AK + +R+ +     AA+++EY R +  
Sbjct: 191 --------PTGALSSYLARTTSSASYFKVRDIAKQLAQRLPKSWERRAARMEEYTRNLW- 241

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
            QG   FEELG YY+GP+DGH++  L+ VL+ V      GP+LVHV+T   ++ +    +
Sbjct: 242 -QGGAWFEELGFYYVGPIDGHDLGQLLPVLKNVRD-AKHGPILVHVMT---KKGKGYAPA 296

Query: 379 EAIEKQQEGASDSN-----SLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
           EA   +  G +  N      +     + +Y   F ++L+ EA+KD  IV + A M     
Sbjct: 297 EASPDKYHGVAKFNVVTGVQVKPQAAAPSYTRVFADSLIQEAKKDPKIVAITAAMPDGTG 356

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L +F  +FP+R FDVG+AEQHAVTF+AGLA  G+KPF  I S FLQR YDQVV+DV  Q 
Sbjct: 357 LDVFGREFPDRTFDVGIAEQHAVTFAAGLATEGMKPFAAIYSTFLQRGYDQVVHDVAIQS 416

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPVRF I  AG VG+DG T  G+FD+ ++ CLPN ++MA +DE EL  MVAT  SIDDRP
Sbjct: 417 LPVRFAIDRAGFVGADGATHAGSFDLAYLGCLPNFVIMAAADEAELKHMVATAVSIDDRP 476

Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
             FRYPRG      +P   G  + IGKG++L EG  VALL  G  +   +KA   L+ LG
Sbjct: 477 SAFRYPRGEGTGVAMPEV-GEVLPIGKGRILREGSTVALLSIGTRLGEAMKAADQLAALG 535

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKW 673
           +  TVADARF KPLD  L+R+L QNH  L+T+EEGS+GGFGSHV  ++A +GLL+ G+K 
Sbjct: 536 LSTTVADARFMKPLDTDLIRQLAQNHEVLVTIEEGSVGGFGSHVLQYLADNGLLEHGLKV 595

Query: 674 RPIVLPDNYIEHASPTQQLALAGLTGHHIAAT 705
           R  V+PD +++   P      AGL+   I  T
Sbjct: 596 RAKVMPDCFVDQDKPEAMYQKAGLSAGGIVET 627


>gi|418936010|ref|ZP_13489753.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium sp. PDO1-076]
 gi|375057273|gb|EHS53454.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium sp. PDO1-076]
          Length = 639

 Score =  575 bits (1482), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 301/645 (46%), Positives = 410/645 (63%), Gaps = 22/645 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V+ P  L+++  ++L QLA E+R E+   VSKT   L + L  VELT+A+H VF
Sbjct: 7   TPLLDTVKLPADLRTIDDRDLPQLARELRDEMIDAVSKTGGHLGAGLGVVELTIAIHKVF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D++++DVG Q Y HKILTGRR  I TLR++DG+SG+T R+ESEYDPF A H   S+
Sbjct: 67  NTPDDRLIFDVGHQCYPHKILTGRRDRIRTLRQEDGLSGFTKRAESEYDPFGAAHSSTSI 126

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVA D+      ++ VI +G   AG AYEA++NAG LD+ +IVILND+  S+ P
Sbjct: 127 SAGLGMAVAADLSQTDRKVIAVIGDGAMSAGMAYEALNNAGALDARLIVILNDNDMSIAP 186

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S+ L+R+ S +++  +R++ K +T  +G+ +     +  E+ARG + 
Sbjct: 187 --------PTGAMSAYLARLASGRTYMGIRDIGKKLTAYLGKNIDRAITRAVEHARGYV- 237

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G T+FEE+G Y+IGP+DGH+ E L+ VL+ V      GPVL+HVVT++ +       +
Sbjct: 238 -TGGTMFEEMGFYHIGPIDGHSFEHLLPVLRNVRD-NQQGPVLIHVVTQKGK---GYAPA 292

Query: 379 EAIEKQQEGASDSNSLPFGNYSR------TYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
           EA   +  G +  + +  G  ++      +Y   F +ALV EA  D+ IV + A M    
Sbjct: 293 EAAADKYHGVNKFDVIT-GTQAKAKPNAPSYTAVFGDALVQEATLDEKIVGITAAMPSGT 351

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            L   QE FP R FDVG+AEQHAVTF+AGLA  G +PFC + S FLQR YDQVV+DV  Q
Sbjct: 352 GLDKLQELFPTRTFDVGIAEQHAVTFAAGLASEGFRPFCALYSTFLQRGYDQVVHDVAIQ 411

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
            LPVRF I  AG VG+DGPT  G+FD  F++ LP  +VMA +DE EL  MV T AS DD 
Sbjct: 412 GLPVRFPIDRAGFVGADGPTHAGSFDTGFLASLPGFVVMAAADEAELKHMVRTAASYDDG 471

Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
           P+ FRYPRG  V   LP  RG  +EIGKG+++ EG  VALL +G  + +CL A   L   
Sbjct: 472 PISFRYPRGEGVGVALP-ERGEILEIGKGRIVKEGTKVALLSFGTRLADCLLAAEDLDAA 530

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 672
           G+  TVADARF KPLD+ ++R L + H  L+TVEEG++GGFGS V H +  +GLLD G+K
Sbjct: 531 GLSTTVADARFAKPLDVDMIRRLAREHAVLVTVEEGAVGGFGSQVVHLLVNEGLLDGGLK 590

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREAL 717
            R +VLPD +++ A P    A AGL    I  T  + LG T+  +
Sbjct: 591 MRSLVLPDYWMDQAKPEVMYAKAGLDAAGILQTVFAALGETQAGV 635


>gi|424873984|ref|ZP_18297646.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium leguminosarum
           bv. viciae WSM1455]
 gi|393169685|gb|EJC69732.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium leguminosarum
           bv. viciae WSM1455]
          Length = 638

 Score =  575 bits (1482), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 305/640 (47%), Positives = 407/640 (63%), Gaps = 22/640 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V  P  L+ L  ++L QLA E+R E+   VS+T   L + L  VELT+A+H VF
Sbjct: 7   TPLLDQVIYPADLRKLEDRDLPQLAREVRDEMIDAVSRTGGHLGAGLGVVELTIAIHSVF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D++++DVG Q Y HKILTGRR  I TLR++DG+SG+T R+ESEYDPF A H   S+
Sbjct: 67  DTPDDRLIFDVGHQCYPHKILTGRRDRIRTLRQEDGLSGFTRRAESEYDPFGAAHSSTSI 126

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMA+A D+      ++ VI +G   AG AYEA++NAG LD+ +IVILND+  S+ P
Sbjct: 127 SAGLGMAIAADLDKSDRRVIAVIGDGAMSAGMAYEALNNAGALDARLIVILNDNDMSIAP 186

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S+ L+R+ S +++   R+  K +T  +G+ +     +  E+ARG + 
Sbjct: 187 --------PTGAMSAYLARLASGRTYMGFRDFGKKLTAYLGKNIDRAITRAVEHARGYV- 237

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G T+FEE+G Y+IGP+DGH+ + L+ VL+ V   G  GPVL+HVVT++ +       +
Sbjct: 238 -TGGTMFEEMGFYHIGPIDGHSFDHLLPVLRNVRDNGR-GPVLIHVVTQKGK---GYPPA 292

Query: 379 EAIEKQQEGASDSNSLPFGNYSR------TYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
           EA   +  G +  + +  G  +R      +Y   F EALV EA  D  IV + A M    
Sbjct: 293 EAAADKYHGVNKFDVIT-GAQARVKPNAPSYTSVFAEALVQEATLDDKIVGITAAMPNGT 351

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            L    E FP R FDVG+AEQHAVTF+AGLA  G KPF  + S FLQRAYDQVV+DV  Q
Sbjct: 352 GLDKLAEAFPSRCFDVGIAEQHAVTFAAGLAAEGYKPFAALYSTFLQRAYDQVVHDVAIQ 411

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
            LPVRF I  AG VG+DGPT  G+FD TF++ LP  +VMA +DE EL  MV T  + D  
Sbjct: 412 GLPVRFPIDRAGFVGADGPTHAGSFDTTFLTTLPGFVVMAAADEAELKHMVRTAVAYDGG 471

Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
           P+ FRYPRG  V  D+P  RG  ++IGKG+++ EG  VALL +G  + +CL A   L   
Sbjct: 472 PISFRYPRGEGVGVDMPA-RGEILQIGKGRIVKEGTKVALLSFGTRLADCLLAAEDLDAA 530

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 672
           G+  TVADARF KPLD  L+R+L ++H  +ITVEEGSIGGFGSHV HF+A +GLLD+G+K
Sbjct: 531 GLSTTVADARFAKPLDHDLIRQLARHHEMVITVEEGSIGGFGSHVMHFLATEGLLDNGLK 590

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
            R +V+PD ++E A P    A AGL    I +T    LGR
Sbjct: 591 LRALVMPDIWMEQAKPEAMNAHAGLDRAGIVSTVFRALGR 630


>gi|300022017|ref|YP_003754628.1| deoxyxylulose-5-phosphate synthase [Hyphomicrobium denitrificans
           ATCC 51888]
 gi|299523838|gb|ADJ22307.1| deoxyxylulose-5-phosphate synthase [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 648

 Score =  575 bits (1481), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 305/638 (47%), Positives = 404/638 (63%), Gaps = 21/638 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V+ P  L+ L   +L QLA E+R+E    VS T   L + L  VELTVALH++F
Sbjct: 11  TPLLDTVKTPDDLRKLAEADLPQLAAELRTETIDAVSVTGGHLGAGLGVVELTVALHYLF 70

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDV  QTY HKILTGRR  I TLR+ +G+SG+T R+ESE+DPF A H   S+
Sbjct: 71  DTPRDRLIWDVSHQTYPHKILTGRRDRIRTLRQPNGLSGFTKRTESEFDPFGAAHSSTSI 130

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVARD+ G    +V VI +G   AG AYEA++NAG  +  +IVILND+  S+ P
Sbjct: 131 SAGLGMAVARDMSGGDTNVVCVIGDGAMSAGMAYEALNNAGARNERLIVILNDNDMSIAP 190

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      ALSS L+R  SS S+  +R+ AK + +R+ +     AA+V+EY R +  
Sbjct: 191 PT--------GALSSYLARTTSSASYFAVRDFAKQLAQRLPKSWERRAARVEEYTRSLW- 241

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G   FEELG +Y+GP+DGH++  L+ VL+ V      GP+LVHV+T   ++ +    +
Sbjct: 242 QGGGAWFEELGFHYVGPIDGHDLGQLVPVLKNVRD-AKQGPILVHVMT---KKGKGYAPA 297

Query: 379 EAIEKQQEGASDSNSLPFGNYSR------TYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
           EA   +  G +  N +  G  ++      +Y   F ++L+ EA+KD  IV + A M    
Sbjct: 298 EASPDKYHGVAKFNVVT-GVQAKPQAAAPSYTRVFADSLIAEAKKDPKIVAITAAMPDGT 356

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            L +F  +FP+R FDVG+AEQHAVTF+AGLA  G+KPF  I S FLQR YDQVV+DV  Q
Sbjct: 357 GLDVFGREFPDRTFDVGIAEQHAVTFAAGLATEGMKPFAAIYSTFLQRGYDQVVHDVAIQ 416

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
            LPVRF I  AG VG+DG T  G+FD+ ++ CLPN ++MA +DE EL  MVAT ASIDDR
Sbjct: 417 SLPVRFAIDRAGFVGADGATHAGSFDLAYLGCLPNFVIMAAADEAELKHMVATAASIDDR 476

Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
           P  FRYPRG      +P   G  + IGKG++L EG  VALL  G  +   LKA   L+ L
Sbjct: 477 PSAFRYPRGEGTGVQMPEV-GEVLPIGKGRILREGSTVALLSLGTRLGEALKAADQLAAL 535

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 672
           G+  TVADARF KPLD  L+R+L QNH  L+T+EEGSIGGFGSHV  +++ +GLLD G+K
Sbjct: 536 GLSTTVADARFMKPLDTDLIRQLAQNHEVLVTIEEGSIGGFGSHVLQYLSDNGLLDHGLK 595

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
            R  V+PD +++   P      AGL+   I  T  S L
Sbjct: 596 VRSKVMPDCFVDQDKPEVMCQKAGLSASGIVETVRSAL 633


>gi|319408216|emb|CBI81869.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella schoenbuchensis
           R1]
          Length = 640

 Score =  575 bits (1481), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 308/645 (47%), Positives = 408/645 (63%), Gaps = 31/645 (4%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD +  P  L++ +  +L QLA E+R+E    VS T   L + L  VELT+ALH+VF
Sbjct: 6   TPLLDRICFPQDLRAFSESDLVQLANELRAETIDAVSVTGGHLGAGLGVVELTIALHYVF 65

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P DKI+WDVG QTY HKILTGRR  I TLR+  G+SG+T RSES YD F AGH   S+
Sbjct: 66  NTPDDKIIWDVGHQTYPHKILTGRRDKIRTLRQDGGLSGFTKRSESVYDSFGAGHSSTSI 125

Query: 199 SAGLGMAVARDIKGK-RECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLH 257
           SAGLGMAVA  +K + R  I+ VI +G   AG AYEAM+NAG LD+ +IVILND+  S+ 
Sbjct: 126 SAGLGMAVASMLKAEERRNIICVIGDGAMSAGMAYEAMNNAGALDARLIVILNDNDMSIA 185

Query: 258 PKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMI 317
           P           A+S+ L+R+ S  S+R LRE  K ++K++ +   + A   +E+ARG +
Sbjct: 186 P--------PTGAMSAYLARLVSRPSYRSLREQVKILSKKLPKFFSDKARLSEEFARGFL 237

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR------- 370
              G +LFEELG YY+GP+DGHN+  L+ VL+ V    + GPVLVHVVT + +       
Sbjct: 238 --VGGSLFEELGFYYVGPIDGHNMNHLLPVLKNVREYPN-GPVLVHVVTHKGKGYAPAEV 294

Query: 371 ---RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAG 427
              +     + + +  +Q   + S  LP       Y   F +AL+ EA  D  IV + A 
Sbjct: 295 SSDKYHGVNRFDVVTGKQV-KTQSKFLP-------YTKVFSKALIEEASHDDKIVAITAA 346

Query: 428 MEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVN 487
           M     L  F EKFP++ FDVG+AEQHAVTF+AG+AC G KPF  I S FLQRAYDQ+++
Sbjct: 347 MPTGTGLDSFAEKFPDKMFDVGIAEQHAVTFAAGIACEGYKPFVAIYSTFLQRAYDQIIH 406

Query: 488 DVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVA 547
           DV  Q+LPVRF I  AG VG+DG T  G+FDI F++ LP  +VMAPSDE EL+ MV T A
Sbjct: 407 DVSIQKLPVRFAIDRAGFVGADGATHAGSFDIVFLATLPEFVVMAPSDEVELMHMVRTAA 466

Query: 548 SIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARA 607
           + D  P+ FRYPRG     DLP  RG  +EIGKG++L EG  +AL+ +G  +   L A  
Sbjct: 467 AYDQGPISFRYPRGESSGIDLP-QRGEVLEIGKGRILCEGSKIALVCFGTRLSEVLIAAN 525

Query: 608 LLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLL 667
            L+  G+  TVADARF KPLD  L+R L + H  L+T+EEG++GGFG+HV  F+A +GLL
Sbjct: 526 ELAAEGLSTTVADARFAKPLDKDLIRRLAREHEVLVTIEEGAMGGFGAHVLQFLAQEGLL 585

Query: 668 DSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
           + G+K R +  PD Y+ H SP + L+  GL    I  T  + LGR
Sbjct: 586 EHGLKVRTLKFPDEYLNHGSPNKVLSSIGLDATGIINTVFNALGR 630


>gi|405378915|ref|ZP_11032824.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium sp. CF142]
 gi|397324517|gb|EJJ28873.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium sp. CF142]
          Length = 638

 Score =  575 bits (1481), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 302/640 (47%), Positives = 409/640 (63%), Gaps = 22/640 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V  P  L+ L  ++L QLA E+R E+   VS+T   L + L  VELT+A+H+VF
Sbjct: 7   TPLLDQVTYPADLRKLEDRDLPQLAREVRDEMIDAVSRTGGHLGAGLGVVELTIAIHNVF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D++++DVG Q Y HKILTGRR  I TLR+++G+SG+T R+ESEYDPF A H   S+
Sbjct: 67  NTPDDRLIFDVGHQCYPHKILTGRRDRIRTLRQENGLSGFTRRAESEYDPFGAAHSSTSI 126

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVA DI      ++ VI +G   AG AYEA++NAG LD+ +IVILND+  S+ P
Sbjct: 127 SAGLGMAVAADIDKTDRRVIAVIGDGALSAGMAYEALNNAGALDARLIVILNDNDMSIAP 186

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S+ L+R+ S +++   R+  K +T  +G+ +     +  E+ARG + 
Sbjct: 187 --------PTGAMSAYLARLASGRTYMGFRDFGKKLTAYLGKNIDRAITRAVEHARGYV- 237

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G T+FEE+G Y+IGP+DGH+ + L+ VL+ V    + GPVL+HVVT++ +       +
Sbjct: 238 -TGGTMFEEMGFYHIGPIDGHSFDHLLPVLRNVRD-NANGPVLIHVVTQKGK---GYAPA 292

Query: 379 EAIEKQQEGASDSNSLPFGNYSR------TYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
           EA   +  G +  + +  G  ++      +Y + F E LV EA  D  +V + A M    
Sbjct: 293 EAAADKYHGVNKFDVIT-GTQAKVKPNAPSYTNVFAETLVQEATLDDRVVGITAAMPTGT 351

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            L  F E FP R FDVG+AEQHAVTF+AGLA  G KPF  + S FLQRAYDQVV+DV  Q
Sbjct: 352 GLDKFAEIFPSRCFDVGIAEQHAVTFAAGLAAEGFKPFAALYSTFLQRAYDQVVHDVAIQ 411

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
            LPVRF I  AG VG+DGPT  G+FD  F++ LP  +VMA +DE EL  MV T  + D  
Sbjct: 412 GLPVRFPIDRAGFVGADGPTHAGSFDTAFLATLPGFVVMAAADEAELKHMVRTAVAYDAG 471

Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
           P+ FRYPRG  V  D+P  RG  +EIGKG+++ EG  VALL +G  + +CL A   L   
Sbjct: 472 PISFRYPRGEGVGVDMP-ERGQILEIGKGRIVKEGTKVALLSFGTRLADCLLAAEDLDAA 530

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 672
           G+  TVADARF KPLD  L+R+L ++H  LITVEEGS+GGFGS V  F+A+DGLLD G+K
Sbjct: 531 GLSTTVADARFAKPLDHALIRQLARHHEILITVEEGSVGGFGSQVMQFMAMDGLLDRGLK 590

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
            R +V+PD ++E A P   +A AGL    I +T  + LGR
Sbjct: 591 VRSLVMPDIWMEQAKPEAMIAHAGLDRAGIVSTVFNALGR 630


>gi|372281821|ref|ZP_09517857.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oceanicola sp. S124]
          Length = 641

 Score =  575 bits (1481), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 311/650 (47%), Positives = 410/650 (63%), Gaps = 34/650 (5%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V  P  +K L+  ELK+LA E+R+E  S VS+T   L + L  +ELTVALH +F
Sbjct: 7   TPLLDRVVTPADMKGLSDAELKRLANELRAETISAVSETGGHLGAGLGVIELTVALHAIF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
            AP DKI+WDV  Q+Y HKILTGRR  I TLR+K G+SG+T RSES YDPF A H   S+
Sbjct: 67  EAPRDKIIWDVSHQSYPHKILTGRRDRIRTLRQKGGLSGFTKRSESPYDPFGAAHSSTSI 126

Query: 199 SAGLGMAVARDIKGK-RECI---VTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
           SA LG AVARD+ G+  E +   + VI +G   AG A+EAM+NAG+L   MIVILND+  
Sbjct: 127 SAALGFAVARDLGGQLPEGLGDAIAVIGDGAMSAGMAFEAMNNAGHLGKRMIVILNDNEM 186

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+ P         + ALS+ LSR+ +   F   +E AKG    +     E A +  E  +
Sbjct: 187 SIAP--------PVGALSNYLSRLYAGDPFHSFKEAAKGAVSLLPPPFQEGAKRAKEMLK 238

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---- 370
           G+    G TLFEELG  Y+GP+DGH++  L+ VL+ V +  + GPVL+HVVT++ +    
Sbjct: 239 GIA--VGGTLFEELGFSYLGPLDGHDMGQLLPVLRTVKARAT-GPVLIHVVTKKGKGYAP 295

Query: 371 ------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVV 424
                 R   T K +    +Q+ A  +        + +Y   F E LV  A +D  I  V
Sbjct: 296 AETASDRGHATAKFDVPSGKQKKAPSN--------APSYTSVFGEELVRLAAEDSRICAV 347

Query: 425 HAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQ 484
            A M     LQL  ++FP R FDVG+AEQH VTF+AGLA GG++PFC I S FLQR YDQ
Sbjct: 348 TAAMPDGTGLQLMDQRFPSRCFDVGIAEQHGVTFAAGLAAGGMRPFCAIYSTFLQRGYDQ 407

Query: 485 VVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVA 544
           VV+DV  QRLPVRF I  AGLVG+DG T  G+FD+ FM+ LP M+VMA +DE EL  MVA
Sbjct: 408 VVHDVAIQRLPVRFAIDRAGLVGADGATHAGSFDVAFMANLPGMVVMAAADEAELKHMVA 467

Query: 545 TVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLK 604
           T A+ D+ P+ FRYPRG  V  ++P  +G  +EIGKG+++ EG  VALL +GA ++  L 
Sbjct: 468 TAAAHDEGPIAFRYPRGEGVGVEMP-EKGQVLEIGKGRMIREGGRVALLSFGARLKEVLD 526

Query: 605 ARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALD 664
           A   L   GI  TVADARF KPLD +++ +L  +H  LIT+EEG+IGGFGSHV+  +A +
Sbjct: 527 AAEALQARGITPTVADARFAKPLDREMILKLAADHEALITIEEGAIGGFGSHVAQLLADE 586

Query: 665 GLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTR 714
           G+ D G+K+R +VLPD +I+ +SP    A AG+    I A  L +LG  R
Sbjct: 587 GVFDKGLKFRSMVLPDIFIDQSSPADMYATAGMNAEDIEAKVLDVLGVER 636


>gi|407799466|ref|ZP_11146359.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oceaniovalibus
           guishaninsula JLT2003]
 gi|407058651|gb|EKE44594.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oceaniovalibus
           guishaninsula JLT2003]
          Length = 641

 Score =  574 bits (1480), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 308/654 (47%), Positives = 411/654 (62%), Gaps = 34/654 (5%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           D+  TP+LD +  P  L+ LT  EL Q+A E+R+E  S VS+T   L + L  VELTVAL
Sbjct: 3   DRPATPLLDRIHEPADLRGLTDAELVQVADELRAETISAVSQTGGHLGAGLGVVELTVAL 62

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H VF  P D+++WDV  QTY HKILTGRR  I TLR+KDG+SG+T RSES YDPF A H 
Sbjct: 63  HAVFETPRDRLIWDVSHQTYPHKILTGRRDRIRTLRQKDGLSGFTKRSESVYDPFGAAHS 122

Query: 195 CNSVSAGLGMAVARDIKGKREC----IVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
             S+SA LG A ARD+ G+ +      + VI +G   AG A+EAM+NAG++   + V+LN
Sbjct: 123 STSISAALGFATARDLGGRPDPRLGDAIAVIGDGAMSAGMAFEAMNNAGHMKKRLFVVLN 182

Query: 251 DSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVD 310
           D+  S+ P +         A+SS LSR+ +   F++ +  AKG    + + + + A +  
Sbjct: 183 DNEMSIAPPV--------GAMSSYLSRLYAGAPFQEFKAAAKGAVSLLPQPLQQGARRAK 234

Query: 311 EYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR 370
           +  + +    G TLFEELG  YIGP+DGH+++ L+ VL+ V +  + GP+L+HV+T + +
Sbjct: 235 DLIKHIT--IGGTLFEELGFDYIGPLDGHDLDQLLPVLRTVRARAT-GPMLLHVITRKGK 291

Query: 371 ----------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKD 420
                     R   T K + I  +Q+  S SN+        +Y   F +AL+ EA  D  
Sbjct: 292 GYAPAEEAADRGHATSKFDVITGKQK-KSPSNA-------PSYTSVFAKALIREAADDPR 343

Query: 421 IVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQR 480
           I  V A M     L LF E+   R FDVG+AEQH VTF+AGLA GG++PFC I S FLQR
Sbjct: 344 ICAVTAAMPDGTGLNLFAERHASRCFDVGIAEQHGVTFAAGLAAGGMRPFCAIYSTFLQR 403

Query: 481 AYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELV 540
            YDQVV+DV  QRLPVRF I  AGLVG+DG T  GAFDI F+S LP   VMA SDE ELV
Sbjct: 404 GYDQVVHDVALQRLPVRFAIDRAGLVGADGATHAGAFDIAFLSNLPGFTVMAASDEAELV 463

Query: 541 DMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQ 600
            MVAT A+ DD P+ FR+PRG     DLP  RG+P+EIGKG++L EG  VA+L  G  + 
Sbjct: 464 HMVATAAAHDDGPIAFRFPRGEGTGVDLP-ERGVPLEIGKGRILREGSGVAILCLGTRMV 522

Query: 601 NCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHF 660
             L+A   L+  GI  TVADARF KPLD +++ +L ++H  LITVEEG++GGFGSHV+  
Sbjct: 523 EVLQAHEALAARGIVPTVADARFAKPLDREMILQLARDHDALITVEEGAVGGFGSHVAQL 582

Query: 661 IALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTR 714
           +A +G+ D G+ +R +VLPD +I+ A P    A+AGL    I A  LS++G  R
Sbjct: 583 LADEGVFDDGLVFRSMVLPDTFIDQADPRDMYAVAGLNAEDIEAKVLSVMGVAR 636


>gi|408378647|ref|ZP_11176244.1| 1-deoxy-D-xylulose-5-phosphate synthase [Agrobacterium albertimagni
           AOL15]
 gi|407747784|gb|EKF59303.1| 1-deoxy-D-xylulose-5-phosphate synthase [Agrobacterium albertimagni
           AOL15]
          Length = 639

 Score =  574 bits (1480), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 302/640 (47%), Positives = 410/640 (64%), Gaps = 22/640 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD VE P  LK++  ++L QLA E+R E+   VSKT   L + L  VELT+A+H VF
Sbjct: 7   TPLLDKVEFPKDLKAIEDRDLPQLAREVRDEMIDAVSKTGGHLGAGLGVVELTIAIHKVF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D++++DVG Q Y HKILTGRR  I TLR++DG+SG+T R+ESEYDPF A H   S+
Sbjct: 67  DTPDDRLIFDVGHQCYPHKILTGRRDRIRTLRQEDGLSGFTKRAESEYDPFGAAHSSTSI 126

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVA ++      ++ VI +G   AG AYEA++NAG LD+ +IVILND+  S+ P
Sbjct: 127 SAGLGMAVAAELSKTDRKVIAVIGDGAMSAGMAYEALNNAGALDARLIVILNDNDMSIAP 186

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S+ L+R+ S +S+   RE+ K +T  +G+ +     +  E+ARG + 
Sbjct: 187 --------PTGAMSAYLARLASGRSYMGFRELGKKLTAYLGKTVDRAITRAVEHARGYV- 237

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G T+FEELG Y+IGP+DGH+ E L+ VL+ V    + GPVL+HVVT++ +       +
Sbjct: 238 -TGGTMFEELGFYHIGPIDGHSFEHLLPVLRNVRD-NAKGPVLIHVVTQKGK---GYAPA 292

Query: 379 EAIEKQQEGASDSNSLPFGNYSR------TYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
           EA   +  G +  + +  G  ++       Y   F +ALV EA  D+ IV + A M    
Sbjct: 293 EAAADKYHGVNKFDVIT-GTQAKAKPNAPAYTAVFADALVEEARHDEKIVGITAAMPNGT 351

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            L   Q  FPER FDVG+AEQHAVTF+AGLA  G KPFC + S FLQR YDQVV+DV  Q
Sbjct: 352 GLDKLQTLFPERTFDVGIAEQHAVTFAAGLAAEGFKPFCALYSTFLQRGYDQVVHDVGIQ 411

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
            LPVRF I  AG VG+DGPT  G+FD  F++ LP  +VMA +DE EL  MV T A+ D+ 
Sbjct: 412 GLPVRFPIDRAGFVGADGPTHAGSFDTGFLAALPGFVVMAAADEAELKHMVRTAAAYDEG 471

Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
           P+ FRYPRG  V   +P  RG  +EIG+G+++ +G  VALL +G  + +CL A   L   
Sbjct: 472 PISFRYPRGEGVGVPMP-ERGEILEIGRGRIVKQGSKVALLSFGTRLADCLLAAEDLDAA 530

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 672
           G+  TVADARF KPLD  L+R+L ++H  ++TVEEG++GGFGSHV HF+  +GLLD+G+K
Sbjct: 531 GLSTTVADARFAKPLDHDLIRQLARHHQVVVTVEEGAVGGFGSHVMHFLVNEGLLDNGLK 590

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
            R +VLPD +++ A P    A AGL    I  T  + LG+
Sbjct: 591 VRSLVLPDVWMDQAKPEVMYARAGLDASGILKTVFAALGQ 630


>gi|148554381|ref|YP_001261963.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingomonas wittichii
           RW1]
 gi|166201541|sp|A5V6A9.1|DXS_SPHWW RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|148499571|gb|ABQ67825.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Sphingomonas wittichii
           RW1]
          Length = 639

 Score =  574 bits (1479), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 311/649 (47%), Positives = 404/649 (62%), Gaps = 22/649 (3%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           D+ PTP+LD V  P  L+ L   +L+QLA E+R+E+ S VS T   L + L  VELTVAL
Sbjct: 3   DRPPTPLLDTVSTPEDLRRLKPADLRQLADELRAEMISAVSVTGGHLGAGLGVVELTVAL 62

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H+VF  P D ++WDVG Q Y HKILTGRR  I TLR+  G+SG+T RSESEYDPF A H 
Sbjct: 63  HYVFDTPRDVLIWDVGHQAYPHKILTGRRDRIRTLRQGGGLSGFTKRSESEYDPFGAAHS 122

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA LG AVA  +  K    + VI +G   AG AYEAM+NA    + +IVILND+  
Sbjct: 123 STSISAALGFAVANKLANKEGRAIAVIGDGAMSAGMAYEAMNNAKQAGNRLIVILNDNDM 182

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+ P         + ALS+ L++I SS+ F  +R  AK + +++ R +H++A + +EYAR
Sbjct: 183 SIAP--------PVGALSAYLAKIVSSRPFLSMRGFAKRVAQKLPRPIHDFAKRSEEYAR 234

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAED 374
           GM    G TLFEELG YY+GPVDGHN++ L+ +L+ V   G  GP+L+HVVT + +    
Sbjct: 235 GMA--TGGTLFEELGFYYVGPVDGHNLDHLLPILENVRD-GDHGPILIHVVTNKGKGYAP 291

Query: 375 TQ----KSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
            +    K   ++K    +      P G  S  Y   F +ALV EA++D  I  + A M  
Sbjct: 292 AEAAADKYHGVQKFDVVSGVQAKAPPGPPS--YTGVFADALVAEAKRDDRICAITAAMPS 349

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L  F + FPER FDVG+AEQHAVTF+AGLA  G +PFC I S FLQRAYDQVV+DV 
Sbjct: 350 GTGLDKFGKAFPERSFDVGIAEQHAVTFAAGLAAQGYRPFCAIYSTFLQRAYDQVVHDVA 409

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q LPVRF I  AGLVG+DG T  G+FDIT+++ LPNM+VMA +DE ELV MV T A  D
Sbjct: 410 IQNLPVRFAIDRAGLVGADGSTHAGSFDITYLATLPNMVVMAAADEAELVHMVHTAAVHD 469

Query: 551 DRPVCFRYPRGAIVRTDLPGYRGIP--IEIGKGKVLVEGKDVALLGYGAMVQNCLKARAL 608
             P+  RYPRG  V   LP     P  + IGKG+++ EGK VALL  G  +   L+A   
Sbjct: 470 SGPIALRYPRGNGVGVALP---AAPERLAIGKGRIVREGKTVALLSLGTRLGEALRAADQ 526

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLD 668
           L  LG+  TVAD RF KPLD  +++ L  +H   +T+EEG+IGG G+HV    +  GL+D
Sbjct: 527 LDALGLSTTVADLRFAKPLDEAMIQTLLTSHEVAVTIEEGAIGGLGAHVLTLASDLGLID 586

Query: 669 SGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREAL 717
            G+K R + LPD + EH  P +Q A AGL    I AT L+ L R  + L
Sbjct: 587 GGLKLRTMRLPDAFQEHDKPEKQYAEAGLDAESIVATVLAALHRNSKGL 635


>gi|395792084|ref|ZP_10471523.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella vinsonii subsp.
           arupensis Pm136co]
 gi|423714132|ref|ZP_17688391.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella vinsonii subsp.
           arupensis OK-94-513]
 gi|395421279|gb|EJF87535.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella vinsonii subsp.
           arupensis OK-94-513]
 gi|395433003|gb|EJF98977.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella vinsonii subsp.
           arupensis Pm136co]
          Length = 640

 Score =  574 bits (1479), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 311/644 (48%), Positives = 409/644 (63%), Gaps = 29/644 (4%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD +  P  L+SL   +L +LA E+R+E    VS T   L + L  +ELTVALH+VF
Sbjct: 6   TPLLDRICVPHDLRSLPESDLVKLADELRTETIDAVSVTGGHLGAGLGVIELTVALHYVF 65

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+I+WDVG Q Y HKILTGRR  I TLR++ G+SG+T RSES YDPF AGH   S+
Sbjct: 66  NTPEDRIIWDVGHQAYPHKILTGRRDRIRTLRQEGGLSGFTKRSESVYDPFGAGHSSTSI 125

Query: 199 SAGLGMAVARDIKGK-RECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLH 257
           SAGLGMAVA  +K + +  I+ VI +G   AG AYEAM+NAG L++ +IV+LND+  S+ 
Sbjct: 126 SAGLGMAVASALKAEEKRNIIAVIGDGAMSAGMAYEAMNNAGALNARLIVVLNDNDMSIA 185

Query: 258 PKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMI 317
           P           A+S+ L+R+ S  ++R LRE  K + +++ +   + A   +E+ARG +
Sbjct: 186 P--------PTGAMSAHLARLVSRPAYRSLRERIKVLGEKLPKFFLDKARLSEEFARGFL 237

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQK 377
              G TLFEELG YY+GP+DGHN++ L+ VL+ V      GPVLVHVVT + +     + 
Sbjct: 238 --VGGTLFEELGFYYVGPIDGHNLKHLLPVLKNVREY-PHGPVLVHVVTHKGKGYAPAEA 294

Query: 378 SE---------AIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGM 428
           S           I   Q+  + S+ LP       Y   F +AL+ EA  D  IV + A M
Sbjct: 295 SSDKYHGVNRFNIITGQQVKAQSSVLP-------YTKVFSKALIEEASHDDKIVGITAAM 347

Query: 429 EMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVND 488
                L  F +KFPER FDVG+AEQHAVTF+AG+AC G KPF  I S FLQRAYDQ+++D
Sbjct: 348 PTGTGLDAFAKKFPERMFDVGIAEQHAVTFAAGIACEGYKPFVAIYSTFLQRAYDQIIHD 407

Query: 489 VDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVAS 548
           V  Q+LPVRF I  AG VG+DG T  G+FDI F++ LP  +VMAPSDE EL+ MV T A+
Sbjct: 408 VSIQKLPVRFAIDRAGFVGADGATHAGSFDIVFLTTLPEFVVMAPSDEVELMHMVRTAAA 467

Query: 549 IDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARAL 608
            D  P+ FRYPRG  V  DLP  RG  +EIGKG+VL EG  +AL+ +G  +   L A   
Sbjct: 468 YDQGPLSFRYPRGEGVGMDLP-QRGELLEIGKGRVLCEGNRIALVCFGTRMSEVLVAAEE 526

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLD 668
           L   G+  TVADARF KPLD  L+R L + H  L+T+EEG+IGGFG+H+  F+A +GLLD
Sbjct: 527 LLAEGLSTTVADARFAKPLDKDLMRRLAREHEVLVTIEEGAIGGFGAHLLQFLAQEGLLD 586

Query: 669 SGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
            G+K R + LPD Y+ H SP + L+  GL    I  T  + LGR
Sbjct: 587 HGLKVRTLKLPDEYLSHGSPEKVLSRVGLDAVGIINTVFTALGR 630


>gi|410943439|ref|ZP_11375180.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconobacter frateurii
           NBRC 101659]
          Length = 660

 Score =  574 bits (1479), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 308/652 (47%), Positives = 413/652 (63%), Gaps = 34/652 (5%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+LD V  P  +++L++ +LKQLA E+RSE    VS T   L +SL  VELTVALH VF+
Sbjct: 15  PVLDRVTLPSDMRNLSVDQLKQLADELRSETVDAVSTTGGHLGASLGVVELTVALHAVFN 74

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+I+WDVG Q Y HKILTGRR  I TLR+ +G+SG+T R+ESEYDPF A H   S+S
Sbjct: 75  TPDDRIIWDVGHQAYPHKILTGRRDRIRTLRQPEGLSGFTRRAESEYDPFGAAHSSTSIS 134

Query: 200 AGLGMAVARDIKGKRE------CIVTVISNGTTMAGQAYEAMSNA---GYLDSNMIVILN 250
           AGLGMAVA  +  +++       ++ VI +G+  AG AYEAM+NA   G   + +IV+LN
Sbjct: 135 AGLGMAVAHHLHAEKDPSYHERNVIAVIGDGSISAGMAYEAMNNAAVAGPGANRLIVVLN 194

Query: 251 DSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVD 310
           D+  S+ P +         ++S+ LSR+ SS+ F  LR++A  + KR+   +   A + +
Sbjct: 195 DNEMSIAPPV--------GSMSNYLSRLMSSRQFFGLRDLAGKVAKRLPGKIERTAKRAE 246

Query: 311 EYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR 370
           EYARGMI   G TLFEELG YY+GPVDGH++  L+ +L+ +      GP+L+H++TE+ R
Sbjct: 247 EYARGMI--TGGTLFEELGFYYVGPVDGHDMSQLVPILRNLRDADDQGPILLHIITEKGR 304

Query: 371 RAEDTQ----KSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHA 426
             +  +    K  A+ K      +    P G  S  Y   F   L+  A+ D  +V V A
Sbjct: 305 GYKPAEAAGDKYHAVSKFNVVTGEQKKAPAGPPS--YTSVFSRELMRRAKTDDKLVTVTA 362

Query: 427 GMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVV 486
            M     L  F + +P+R+FDVG+AEQHAVTF+AG+A  GL+PFC I S FLQRAYDQVV
Sbjct: 363 AMPSGTGLTAFAKAYPDRFFDVGIAEQHAVTFAAGIASEGLRPFCAIYSTFLQRAYDQVV 422

Query: 487 NDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATV 546
           +DV  Q LPVRF I  AGLVG+DG T  G+FD+ ++ CLPNM+VMAPSDE EL+   AT 
Sbjct: 423 HDVALQNLPVRFAIDRAGLVGADGATHAGSFDLNYLCCLPNMVVMAPSDEIELLHATATA 482

Query: 547 ASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKD-------VALLGYGAMV 599
              D  P+ FRYPRG+ +  DLP  +G  +EIGKG+++ E +        VA+L  G  +
Sbjct: 483 CEYDAGPIAFRYPRGSGIGLDLP-EKGEVLEIGKGRIVRESRQAPGTRSGVAILSLGTRL 541

Query: 600 QNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSH 659
              L+A   L+  G+ VTVADARF KP+D KLV +L   H  LIT+EEG+IGGF S V  
Sbjct: 542 HESLRAADQLAAQGVAVTVADARFAKPIDTKLVDDLVAQHDVLITLEEGAIGGFSSLVVQ 601

Query: 660 FIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
            +A  G LD+ VK+RP+ LPD YI+H +P  Q   AGLT  HI  TA + LG
Sbjct: 602 HLAETGKLDT-VKFRPMALPDKYIDHNNPDVQYDEAGLTAPHIVRTAAAALG 652


>gi|254512770|ref|ZP_05124836.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacteraceae bacterium
           KLH11]
 gi|221532769|gb|EEE35764.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacteraceae bacterium
           KLH11]
          Length = 643

 Score =  574 bits (1479), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 308/651 (47%), Positives = 408/651 (62%), Gaps = 34/651 (5%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           D+  TP+LDLV  P  LK  +  +L QLA E+R+E  S VS T   L + L  VELT AL
Sbjct: 4   DRPNTPLLDLVNRPADLKQFSDGQLHQLAHELRAETISAVSVTGGHLGAGLGVVELTTAL 63

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H VF  P DKI+WDVG Q Y HKILT RR  I TLR KDG+SG+T RSES YDPF A H 
Sbjct: 64  HAVFDTPRDKIIWDVGHQCYPHKILTERRDRIRTLRMKDGLSGFTKRSESPYDPFGAAHS 123

Query: 195 CNSVSAGLGMAVARDIKG-KRECI---VTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
             S+SA LG +VARD+ G   E +   + VI +G+  AG A+EAM+NAG+L   +IVILN
Sbjct: 124 STSISAALGFSVARDLGGVTPEGLGDAIAVIGDGSMSAGMAFEAMNNAGHLGKRLIVILN 183

Query: 251 DSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVD 310
           D+  S+ P +         ALS+ LSRI + + F  L+  AKG    +     E A +  
Sbjct: 184 DNEMSIAPPV--------GALSTYLSRIYAEEPFHDLKAAAKGAVSLLPEPFREGAKRAK 235

Query: 311 EYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR 370
           E  +GM    G TLFEELG  Y+GP+DGH+++ L+ VL+ V +  + GP+L+HV+T++ +
Sbjct: 236 EMLKGMA--VGGTLFEELGFSYLGPIDGHDLDQLLPVLRAVKAKAT-GPILIHVLTKKGK 292

Query: 371 ----------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKD 420
                     +   T + + +  +Q+ A  +        + +Y   F +ALV  A +D  
Sbjct: 293 GYAPAEQARDKGHATARFDVVTGEQKKAPSN--------APSYTSVFGKALVEAAARDDK 344

Query: 421 IVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQR 480
           IV V A M     L LF E++P R FDV +AEQH VTFSA LA GG+KPFC + S FLQR
Sbjct: 345 IVAVTAAMPDGTGLNLFAERYPSRCFDVAIAEQHGVTFSAALAAGGMKPFCAMYSTFLQR 404

Query: 481 AYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELV 540
            YDQVV+DV  QRLPVRF I  AGLVG+DG T  G+FDI +++ LP M+VMA +DE EL+
Sbjct: 405 GYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGSFDIAYLANLPGMVVMAAADEAELI 464

Query: 541 DMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQ 600
            MVAT A+ DD P+ FRYPRG  V  DLP    + +EIGKG+++  G  VALL +G  + 
Sbjct: 465 HMVATAAAHDDGPIAFRYPRGEGVGVDLPDQAEV-LEIGKGRMIQTGARVALLSFGTRLA 523

Query: 601 NCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHF 660
              KA   L+  GI  T+ADARF KPLD  L+ +L  NH  LIT+EEG+IGGFGSHV+  
Sbjct: 524 EVRKAAESLTARGITPTIADARFAKPLDRDLILDLAANHEALITIEEGAIGGFGSHVAQL 583

Query: 661 IALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
           +A +G+ D G+K+R +VLPD +I+ +SP    A+AG+    I A  L++LG
Sbjct: 584 LADEGVFDHGLKYRSMVLPDIFIDQSSPADMYAVAGMNAEQIEAKVLAVLG 634


>gi|85703103|ref|ZP_01034207.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseovarius sp. 217]
 gi|85672031|gb|EAQ26888.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseovarius sp. 217]
          Length = 643

 Score =  574 bits (1479), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 315/653 (48%), Positives = 407/653 (62%), Gaps = 38/653 (5%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           D+  TP+LD   +P  LK L+  +L QLA E+RSE  S VS+T   L + L  VELTVAL
Sbjct: 4   DRPKTPLLDQTASPADLKRLSDPQLVQLAHELRSETISAVSETGGHLGAGLGVVELTVAL 63

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H VF AP DKI+WDV  Q Y HKILTGRR  I TLR+KDG+SG+T RSES YDPF A H 
Sbjct: 64  HAVFDAPRDKIIWDVSHQCYPHKILTGRRDRIRTLRQKDGLSGFTKRSESPYDPFGAAHS 123

Query: 195 CNSVSAGLGMAVARDIKGKREC------IVTVISNGTTMAGQAYEAMSNAGYLDSNMIVI 248
             S+SA LG AVARD+ G   C       + VI +G   AG A+EAM+NAG+L   +IVI
Sbjct: 124 STSISAALGFAVARDLGGN--CPSGLGDAIAVIGDGAMSAGMAFEAMNNAGHLKKRLIVI 181

Query: 249 LNDSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAK 308
           LND+  S+ P +         ALSS LSR+ + + F+  +  AKG    +     E A +
Sbjct: 182 LNDNEMSIAPPV--------GALSSYLSRLYAGEPFQDFKAAAKGAISLLPPPFQEGARR 233

Query: 309 VDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEE 368
             +  +G+    G TLFEELG  Y+GP+DGH++  L+ VL+ V +  + GP+L+HV+T++
Sbjct: 234 AKDMLKGLT--VGGTLFEELGFSYLGPIDGHDLHQLLPVLRTVKARAN-GPILIHVLTKK 290

Query: 369 NR------RAED----TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKD 418
            +      RA D    T K + +  +Q   S SN+        +Y   F +AL+  A +D
Sbjct: 291 GKGYGPAERARDGGHATAKFDVLTGEQR-KSPSNA-------PSYTSVFAKALLAHAGQD 342

Query: 419 KDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFL 478
             I  V A M     L LF E++P R FDVG+AEQHAVTFSAGLA GG+KPFC + S FL
Sbjct: 343 DKICAVTAAMPDGTGLNLFAERYPSRLFDVGIAEQHAVTFSAGLAAGGMKPFCALYSTFL 402

Query: 479 QRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDE 538
           QR YDQVV+DV  QRLPVRF I  AGLVG+DG T  GAFD  F++ LP  +VMA +DE E
Sbjct: 403 QRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGAFDTAFLANLPGFVVMAAADEAE 462

Query: 539 LVDMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAM 598
           LV MVAT  + D+ P+ FRYPRG  +   +P  RG  +EIGKG+++  G  VA+L +G  
Sbjct: 463 LVHMVATAVAHDEGPIAFRYPRGEGMGVTMP-ERGEALEIGKGRIIQTGARVAILSFGTR 521

Query: 599 VQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVS 658
           +   LKA   L   GI  T+ADARF KPLD KL+ +L QNH  LIT+EEG+IGGF SHVS
Sbjct: 522 LAEVLKASESLRARGITPTIADARFAKPLDEKLILDLVQNHEALITIEEGAIGGFASHVS 581

Query: 659 HFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
           HF+A   + D G K+R +VLPD +I+ A+     A+A L    I A  L +LG
Sbjct: 582 HFLAEAQVFDRGFKFRSMVLPDTFIDQANAEDMYAVARLNASDIEARVLDVLG 634


>gi|424880292|ref|ZP_18303924.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium leguminosarum
           bv. trifolii WU95]
 gi|392516655|gb|EIW41387.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium leguminosarum
           bv. trifolii WU95]
          Length = 638

 Score =  573 bits (1478), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 304/640 (47%), Positives = 406/640 (63%), Gaps = 22/640 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V  P  L+ L  ++L QLA E+R E+   VS+T   L + L  VELT+A+H VF
Sbjct: 7   TPLLDQVIYPADLRKLEDRDLPQLAREVRDEMIDAVSRTGGHLGAGLGVVELTIAIHSVF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D++++DVG Q Y HKILTGRR  I TLR++DG+SG+T R+ESEYDPF A H   S+
Sbjct: 67  DTPDDRLIFDVGHQCYPHKILTGRRDRIRTLRQEDGLSGFTRRAESEYDPFGAAHSSTSI 126

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMA+A D+      ++ VI +G   AG AYEA++NAG LD+ +IVILND+  S+ P
Sbjct: 127 SAGLGMAIAADLDKSDRRVIAVIGDGAMSAGMAYEALNNAGALDARLIVILNDNDMSIAP 186

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S+ L+R+ S +++   R+  K +T  +G+ +     +  E+ARG + 
Sbjct: 187 --------PTGAMSAYLARLASGRTYMGFRDFGKKLTAYLGKNIDRAITRAVEHARGYV- 237

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G T+FEE+G Y+IGP+DGH+ + L+ VL+ V   G  GPVL+HVVT++ +       +
Sbjct: 238 -TGGTMFEEMGFYHIGPIDGHSFDHLLPVLRNVRDNGR-GPVLIHVVTQKGK---GYPPA 292

Query: 379 EAIEKQQEGASDSNSLPFGNYSR------TYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
           EA   +  G +  + +  G  +R      +Y   F EALV EA  D  IV + A M    
Sbjct: 293 EAAADKYHGVNKFDVIT-GAQARVKPNAPSYTSVFAEALVQEAALDDKIVGITAAMPNGT 351

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            L    E FP R FDVG+AEQHAVTF+AGLA  G KPF  + S FLQRAYDQVV+DV  Q
Sbjct: 352 GLDKLAEAFPSRCFDVGIAEQHAVTFAAGLAAEGYKPFAALYSTFLQRAYDQVVHDVAIQ 411

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
            LPVRF I  AG VG+DGPT  G+FD  F++ LP  +VMA +DE EL  MV T  + D  
Sbjct: 412 GLPVRFPIDRAGFVGADGPTHAGSFDTAFLTTLPGFVVMAAADEAELKHMVRTAVAYDGG 471

Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
           P+ FRYPRG  V  D+P  RG  ++IGKG+++ EG  VALL +G  + +CL A   L   
Sbjct: 472 PISFRYPRGEGVGVDMPA-RGEMLQIGKGRIVKEGTKVALLSFGTRLADCLLAAEDLDAA 530

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 672
           G+  TVADARF KPLD  L+R+L ++H  +ITVEEGSIGGFGSHV HF+A +GLLD+G+K
Sbjct: 531 GLSTTVADARFAKPLDHDLIRQLARHHEIVITVEEGSIGGFGSHVMHFLATEGLLDNGLK 590

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
            R +V+PD ++E A P    A AGL    I +T    LGR
Sbjct: 591 LRSLVMPDIWMEQAKPEAMNAHAGLDRAGIVSTVFKALGR 630


>gi|56695164|ref|YP_165511.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ruegeria pomeroyi DSS-3]
 gi|81350903|sp|Q5LX42.1|DXS_SILPO RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|56676901|gb|AAV93567.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ruegeria pomeroyi DSS-3]
          Length = 642

 Score =  573 bits (1478), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 313/654 (47%), Positives = 413/654 (63%), Gaps = 34/654 (5%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           D+  TP+LD V  P  LK  +  +L QLA E+R+E  S VS T   L + L  VELTVAL
Sbjct: 3   DRPHTPLLDQVTRPADLKRFSDAQLTQLAGELRAETVSAVSVTGGHLGAGLGVVELTVAL 62

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H VF  P DK++WDVG Q Y HKILT RR  I TLR KDG+SG+T RSES YDPF A H 
Sbjct: 63  HAVFDTPRDKVIWDVGHQCYPHKILTERRDRIRTLRMKDGLSGFTKRSESPYDPFGAAHS 122

Query: 195 CNSVSAGLGMAVARDIKG-KRECI---VTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
             S+SA LG AVARD+ G   E +   + VI +G+  AG A+EAM+NAG+L   +IVILN
Sbjct: 123 STSISAALGFAVARDLGGVTPEGLGDAIAVIGDGSMSAGMAFEAMNNAGHLKKRLIVILN 182

Query: 251 DSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVD 310
           D+  S+ P         + ALS+ LSR+ + + F++L+  AKG    +     E A +  
Sbjct: 183 DNEMSIAP--------PVGALSNYLSRLYAEEPFQELKAAAKGAVSLLPEPFREGAKRAK 234

Query: 311 EYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR 370
           E  +GM    G TLFEELG  YIGP+DGH++  L+ VL+ V +  + GP+L+HV+T++ +
Sbjct: 235 EMLKGMA--VGGTLFEELGFSYIGPIDGHDMGQLLPVLRTVKARAT-GPILLHVLTKKGK 291

Query: 371 ------RAED----TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKD 420
                 RA D    T K + +  +Q+ A  +        + +Y   F +ALV +A +D  
Sbjct: 292 GYAPAERARDRGHATAKFDVVTGEQKKAPSN--------APSYTAVFGKALVDQAARDDK 343

Query: 421 IVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQR 480
           IV V A M     L LF E++P R FDVG+AEQH VTFSA LA GGLKPFC + S FLQR
Sbjct: 344 IVAVTAAMPDGTGLNLFAERYPSRCFDVGIAEQHGVTFSAALAAGGLKPFCAMYSTFLQR 403

Query: 481 AYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELV 540
            YDQVV+DV  QRLPVRF I  AGLVG+DG T  G+FDI +++ LP M+VMA +DE ELV
Sbjct: 404 GYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGSFDIAYLANLPGMVVMAAADEAELV 463

Query: 541 DMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQ 600
            MVAT A+ DD P+ FRYPRG  V  ++P   G  +EIGKG+++ +G  VALL +G  + 
Sbjct: 464 HMVATAAAHDDGPIAFRYPRGEGVGVEMPEL-GKVLEIGKGRMIQKGARVALLSFGTRLT 522

Query: 601 NCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHF 660
              KA   L+  GI  T+ADARF KPLD  L+  L  +H  LIT+EEG++GGFGSHV+  
Sbjct: 523 EVQKAAEALAARGITPTIADARFAKPLDRDLILNLAHDHEALITIEEGAVGGFGSHVAQL 582

Query: 661 IALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTR 714
           +A +G+ D G+K+R +VLPD +I+ +SP    A+AG+    I A  L +LG  R
Sbjct: 583 LADEGVFDHGLKFRSMVLPDIFIDQSSPADMYAVAGMNAPQIEAKVLDVLGIGR 636


>gi|154248651|ref|YP_001419609.1| 1-deoxy-D-xylulose-5-phosphate synthase [Xanthobacter autotrophicus
           Py2]
 gi|229836094|sp|A7IPK6.1|DXS_XANP2 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|154162736|gb|ABS69952.1| deoxyxylulose-5-phosphate synthase [Xanthobacter autotrophicus Py2]
          Length = 643

 Score =  573 bits (1478), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 315/650 (48%), Positives = 413/650 (63%), Gaps = 25/650 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD + +   ++ L   +L QLA E+R+E    VS T   L + L  VELTVALHHVF
Sbjct: 6   TPLLDTIRDAADVRRLPQDKLAQLAAELRAETIDAVSVTGGHLGAGLGVVELTVALHHVF 65

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+++WDVG Q Y HKILTGRR  I TLR+  G+SG+T R+ESEYDPF A H   S+
Sbjct: 66  NTPHDRLIWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTRRAESEYDPFGAAHSSTSI 125

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVARD+ G+   +V VI +G   AG AYEAM+NAG +DS +IVILND+  S+ P
Sbjct: 126 SAGLGMAVARDLSGEERNVVCVIGDGAMSAGMAYEAMNNAGAMDSRLIVILNDNDMSIAP 185

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S+ L+R+ S +++R LRE+ K +   + + +   AA+ +E+ARG   
Sbjct: 186 --------PTGAMSAYLARLISGQTYRSLREIGKQIAGHLPKFVERGAARAEEFARGFW- 236

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G TLFEELG YY+GP+DGHN++ L+ VL+ V      GP+LVHVVT++ +       +
Sbjct: 237 -TGGTLFEELGFYYVGPIDGHNLDHLLPVLKNVRD-AKTGPILVHVVTQKGK---GYAPA 291

Query: 379 EAIEKQQEGASDSN-----SLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
           EA   +  G    +      +   + + +Y   F E+L+ +A  D  +V + A M     
Sbjct: 292 EASADKYHGVVKFDVVTGAQVKAKSNAPSYTRVFAESLISQARHDPKVVAITAAMPSGTG 351

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L LF + +PER FDVG+AEQHAVTF+AGLA  G KPFC + S FLQRAYDQVV+DV  Q 
Sbjct: 352 LDLFGQVYPERTFDVGIAEQHAVTFAAGLAAEGFKPFCALYSTFLQRAYDQVVHDVALQG 411

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPVRF+I  AGLVG+DG T  GAFDI F++CLP M VMAP+DE ELV M+AT+ + DD P
Sbjct: 412 LPVRFIIDRAGLVGADGATHAGAFDIAFLACLPGMTVMAPADEAELVHMMATMVAFDDGP 471

Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGK---DVALLGYGAMVQNCLKARALLS 610
              R+PRG  V  + P  RG  + IGKG++ V G    D+ALL  G  +  CL A   L 
Sbjct: 472 SAVRFPRGEGVGVERP-ERGEVLPIGKGRI-VHGTGEGDIALLSLGTRLAACLDAAERLE 529

Query: 611 KLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSG 670
             G  VTVADARF KPLD +LV +L   H  L+TVEEGS+GGFGSHV   +  +GLLD G
Sbjct: 530 AAGFTVTVADARFAKPLDRELVLKLAAGHGALVTVEEGSVGGFGSHVLQLVTDEGLLDRG 589

Query: 671 -VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLL 719
            VK R +VLPD YI+  +  +QLA AGL    I A    LLG+ +  + L
Sbjct: 590 AVKVRAMVLPDIYIDQETQARQLAAAGLDADAIVAKVEGLLGKAKAGVSL 639


>gi|116250747|ref|YP_766585.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium leguminosarum
           bv. viciae 3841]
 gi|118595610|sp|Q1MKN4.1|DXS_RHIL3 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|115255395|emb|CAK06470.1| putative 1-deoxy-d-xylulose-5-phosphate synthase [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 638

 Score =  573 bits (1478), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 304/640 (47%), Positives = 406/640 (63%), Gaps = 22/640 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V  P  L+ L  ++L QLA E+R E+   VS+T   L + L  VELT+A+H VF
Sbjct: 7   TPLLDQVIYPADLRKLEDRDLPQLAREVRDEMIDAVSRTGGHLGAGLGVVELTIAIHSVF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D++++DVG Q Y HKILTGRR  I TLR++DG+SG+T R+ESEYDPF A H   S+
Sbjct: 67  DTPDDRLIFDVGHQCYPHKILTGRRDRIRTLRQEDGLSGFTRRAESEYDPFGAAHSSTSI 126

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMA+A D+      ++ VI +G   AG AYEA++NAG LD+ +IVILND+  S+ P
Sbjct: 127 SAGLGMAIAADLDKSDRRVIAVIGDGAMSAGMAYEALNNAGALDARLIVILNDNDMSIAP 186

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S+ L+R+ S +++   R+  K +T  +G+ +     +  E+ARG + 
Sbjct: 187 --------PTGAMSAYLARLASGRTYMGFRDFGKKLTAYLGKNIDRAITRAVEHARGYV- 237

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G T+FEE+G Y+IGP+DGH+ + L+ VL+ V   G  GPVL+HVVT++ +       +
Sbjct: 238 -TGGTMFEEMGFYHIGPIDGHSFDHLLPVLRNVRDNGR-GPVLIHVVTQKGK---GYPPA 292

Query: 379 EAIEKQQEGASDSNSLPFGNYSR------TYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
           EA   +  G +  + +  G  +R      +Y   F EALV EA  D  IV + A M    
Sbjct: 293 EAAADKYHGVNKFDVIT-GAQARVKPNAPSYTSVFAEALVQEATLDDKIVGITAAMPNGT 351

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            L    E FP R FDVG+AEQHAVTF+AGLA  G KPF  + S FLQRAYDQVV+DV  Q
Sbjct: 352 GLDKLAEAFPSRCFDVGIAEQHAVTFAAGLAAEGYKPFAALYSTFLQRAYDQVVHDVAIQ 411

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
            LPVRF I  AG VG+DGPT  G+FD  F++ LP  +VMA +DE EL  MV T  + D  
Sbjct: 412 GLPVRFPIDRAGFVGADGPTHAGSFDTAFLTTLPGFVVMAAADEAELKHMVRTAVAYDGG 471

Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
           P+ FRYPRG  V  D+P  RG  ++IGKG+++ EG  VALL +G  + +CL A   L   
Sbjct: 472 PISFRYPRGEGVGVDMPA-RGEILQIGKGRIVKEGTKVALLSFGTRLADCLLAAEDLDAA 530

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 672
           G+  TVADARF KPLD  L+R+L ++H  +ITVEEGSIGGFGSHV HF+A +GLLD+G+K
Sbjct: 531 GLSTTVADARFAKPLDHDLIRQLARHHEMVITVEEGSIGGFGSHVMHFLATEGLLDNGLK 590

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
            R +V+PD ++E A P    A AGL    I +T    LGR
Sbjct: 591 LRSLVMPDIWMEQAKPEAMNAHAGLDRAGIVSTVFKALGR 630


>gi|330814377|ref|YP_004358616.1| octaprenyl-diphosphate
           synthase/Dimethylallyltransferase/Geranyltranstransferas
           e [Candidatus Pelagibacter sp. IMCC9063]
 gi|327487472|gb|AEA81877.1| octaprenyl-diphosphate synthase / Dimethylallyltransferase /
           Geranyltranstransferase (farnesyldiphosphate synthase) /
           Geranylgeranyl pyrophosphate synthetase [Candidatus
           Pelagibacter sp. IMCC9063]
          Length = 636

 Score =  573 bits (1477), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 296/650 (45%), Positives = 415/650 (63%), Gaps = 26/650 (4%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD +  P  L+ L  K+L QLA+E+R EL   VS T   L + L  VELT+A+H++F
Sbjct: 4   TPLLDTIHYPADLRKLEKKQLTQLALELREELVDAVSFTGGHLGAGLGVVELTIAIHYLF 63

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+++WDVG Q Y HKILTGRR+ I TLR+  G+SG+T R+ES+YDPF A H   S+
Sbjct: 64  NTPDDRLIWDVGHQAYPHKILTGRRNKIRTLRQGGGLSGFTKRAESQYDPFGAAHSSTSI 123

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVARD++GK   I++VI +G   AG AYEAM+NAG +DS +IVILND+  S+ P
Sbjct: 124 SAGLGMAVARDLEGKNNSIISVIGDGAMSAGMAYEAMNNAGAMDSRLIVILNDNDMSIAP 183

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                    + A+SS L+++ S K +   R   K ++ +    + +   + +EY RGM  
Sbjct: 184 --------PVGAMSSYLAKLLSGKKYIGFRNFFKKISDKFPGKLKQRIGQAEEYLRGM-- 233

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRR---AEDT 375
             G TLFEE+G +Y+G VDGH+ + L+ VL+ V +    GP L+H +T++ +    AED+
Sbjct: 234 AVGGTLFEEMGFFYVGSVDGHSFDQLLPVLENVKNSTHEGPFLIHAITQKGKGYQPAEDS 293

Query: 376 Q-KSEAIEK----QQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
           + K   + K      E +  S++ P      +Y + F E L   A++D  IV V   M  
Sbjct: 294 KDKYHGVTKFNVATGEQSKSSSNKP------SYTNVFGETLAAHAQQDNKIVAVTGAMPS 347

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              + +FQ++FP+R FDVG+AEQHAVTF+AGLA  G KP+  I S FLQRAYDQVV+DV 
Sbjct: 348 GTGINIFQKQFPKRTFDVGIAEQHAVTFAAGLATEGYKPYAAIYSTFLQRAYDQVVHDVA 407

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q LPVRF I  AGLVG+DGPT  G+FDIT+++ LPN +VMA SDE ELV M+ T   I+
Sbjct: 408 IQSLPVRFAIDRAGLVGADGPTHAGSFDITYLATLPNFVVMAASDEAELVRMINTSVDIN 467

Query: 551 DRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLS 610
           DRP  FRYPRG  +  +LP      ++IGKG+V+ EG +V +L  G  ++ C  A   L 
Sbjct: 468 DRPCAFRYPRGNGIGIELPSIDE-KLKIGKGRVVQEGTNVCILSLGTRLEECKIAAKELK 526

Query: 611 KLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSG 670
             GI  T+ DARF KPLD +L+    + H  LIT+EEGSIGGFGSHV++ +A  G+ D G
Sbjct: 527 NKGISTTIVDARFAKPLDEELIIRCAREHEMLITIEEGSIGGFGSHVANLLAEKGIFDKG 586

Query: 671 VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLLM 720
           +K+R ++LPD +I+  +P +   +AGL    I    L +   ++EA+ ++
Sbjct: 587 LKFRSLMLPDVFIDQDTPEKMYDVAGLNAKQIKEKILDVF-FSKEAIKII 635


>gi|381165922|ref|ZP_09875141.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein
           [Phaeospirillum molischianum DSM 120]
 gi|380684906|emb|CCG39953.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein
           [Phaeospirillum molischianum DSM 120]
          Length = 641

 Score =  573 bits (1477), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 312/640 (48%), Positives = 406/640 (63%), Gaps = 22/640 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
            P+LD +  P   +  T++EL +L  E+R  +   VS T   L + L   ELTVALH+VF
Sbjct: 11  APLLDRISGPEDFRDFTVEELIRLTEEVRQTMIHSVSYTGGHLAAGLGVAELTVALHYVF 70

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P DK++WDVG Q Y HKI+TGRR  +  LR   G+SG+T R+ESEYDPF AGH   S+
Sbjct: 71  DTPNDKLIWDVGHQAYPHKIVTGRRDKMLGLRHGGGLSGFTRRAESEYDPFGAGHSSTSI 130

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSL-H 257
           SA LGMAV RD++G ++ I+ VI +G   AGQAYEAM+NAG   S ++V+LND+  S+ H
Sbjct: 131 SAALGMAVGRDLQGTQKNIIAVIGDGAMSAGQAYEAMNNAGAQGSRLVVVLNDNDMSIAH 190

Query: 258 PKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMI 317
           P         + A+S+ LSR+ SS  +  +R +AK + + +   +   A + +EYARGM+
Sbjct: 191 P---------VGAMSAYLSRLMSSPKYHSIRHLAKDLVQLLPPPLERAAKRAEEYARGMV 241

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQK 377
              G TLFEELG +YIGPVDGHN E L+ VL+ V    S  PVL+HVVT   ++ +    
Sbjct: 242 -TGGGTLFEELGFFYIGPVDGHNFEHLLPVLKNVRDSDSNTPVLLHVVT---KKGKGYAP 297

Query: 378 SEAIEKQQEGASDSNSL------PFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMD 431
           +EA   +  G    + +      P  N + +Y   F +AL+ EAE D  +V + A M   
Sbjct: 298 AEAAADKYHGVGRFDVVTGQFEKPVAN-APSYTSVFAKALLAEAEADDRVVAITAAMPGG 356

Query: 432 LSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQ 491
             L  F  +FP R FDVG+AEQHAVTF+AGLAC GLKPFC I S FLQRAYDQ+ +DV  
Sbjct: 357 TGLDRFSSRFPGRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSTFLQRAYDQLQHDVVL 416

Query: 492 QRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDD 551
           Q+LPVRF I  AGLVG+DG T  GA+D+  + C P++++M PSDE EL+  VAT ASIDD
Sbjct: 417 QKLPVRFAIDRAGLVGADGATHAGAYDLALLGCQPDIVIMCPSDEAELMHAVATAASIDD 476

Query: 552 RPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSK 611
           RP  FRYPRG  +  +LP  RG  + IGKG++L EG  VA+L  G  +   LKA   L+ 
Sbjct: 477 RPSAFRYPRGEGMGIELPD-RGSVLPIGKGRILREGNRVAILTLGTRLVEVLKAADELTA 535

Query: 612 LGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGV 671
           LG+  TVADARF KPLD  LV  L + H  LIT+EEGSIGGFGSHV   +A  G LD G+
Sbjct: 536 LGLSPTVADARFMKPLDEDLVLRLAREHEVLITIEEGSIGGFGSHVLQLLASQGALDRGL 595

Query: 672 KWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
           K RP++LPD +IEH +  +Q    GL    I  TALS LG
Sbjct: 596 KIRPMILPDIFIEHDTQWEQYEKVGLNASGIVKTALSALG 635


>gi|395787324|ref|ZP_10466925.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella birtlesii
           LL-WM9]
 gi|395411748|gb|EJF78269.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella birtlesii
           LL-WM9]
          Length = 638

 Score =  573 bits (1476), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 306/644 (47%), Positives = 410/644 (63%), Gaps = 29/644 (4%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD +  P  L++L   +L +LA E+R+E    VS T   L + L  VELT+ALH+VF
Sbjct: 6   TPLLDRICLPHDLRALPESDLVRLANELRTETIDAVSVTGGHLGAGLGVVELTIALHYVF 65

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+I+WDVG Q Y HKILTGRR  I TLR++ G+SG+T RSES YDPF AGH   S+
Sbjct: 66  QTPEDRIIWDVGHQAYPHKILTGRRDRIRTLRQEGGLSGFTKRSESVYDPFGAGHSSTSI 125

Query: 199 SAGLGMAVARDIKGK-RECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLH 257
           SAGLGM+VA  +K + +  ++ +I +G   AG AYEAM+NAG L++ +IVILND+  S+ 
Sbjct: 126 SAGLGMSVASALKAETKRNVIAIIGDGAMSAGMAYEAMNNAGALNARLIVILNDNDMSIA 185

Query: 258 PKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMI 317
           P           A+S+ L+R+ S  ++R LRE  K + +++ R   + A   +E+ARG++
Sbjct: 186 P--------PTGAMSAHLARLVSRPAYRSLRERVKLLGEKLPRFFLDKARLSEEFARGLL 237

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQK 377
              G TLFEELG YY+GP+DGHN++ L+ VL+ V      GPVLVHVVT + +     + 
Sbjct: 238 --VGGTLFEELGFYYVGPIDGHNLKHLLPVLKNVREY-PHGPVLVHVVTHKGKGYAPAEA 294

Query: 378 SEA---------IEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGM 428
           S           I   ++  + S +LP       Y   F +AL+ EA  D  IV + A M
Sbjct: 295 SSDKYHGVNRFDITTGKQVKTPSRALP-------YTKVFSKALIEEATHDDKIVSITAAM 347

Query: 429 EMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVND 488
                L  F EKFP+R FDVG+AEQHAVTF+AG+AC G KPF  I S FLQRAYDQ+++D
Sbjct: 348 PTGTGLDAFAEKFPKRMFDVGIAEQHAVTFAAGIACEGYKPFVAIYSTFLQRAYDQIIHD 407

Query: 489 VDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVAS 548
           V  Q+LPVRF I  AG VG+DG T  G FDI F++ LP  +VMAPSDE EL+ MV T A+
Sbjct: 408 VSIQKLPVRFAIDRAGFVGADGATHAGNFDIVFLATLPEFVVMAPSDEVELMHMVRTAAA 467

Query: 549 IDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARAL 608
            D  P+ FRYPRG  V  DLP  RG  +EIGKG++L EG  VAL+ +G  +   L+A  +
Sbjct: 468 YDQGPISFRYPRGEGVGIDLP-QRGELLEIGKGRLLREGNRVALVCFGTRMPEVLEAADV 526

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLD 668
           L   G+  TVADARF KPLD  L+R L + H  L+T+EEG++GGFG+H+  F+A +GLL+
Sbjct: 527 LGAEGLSTTVADARFAKPLDKDLMRRLAREHEVLVTIEEGAVGGFGAHLLQFLAQEGLLE 586

Query: 669 SGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
            G+K R + LPD Y+ H SP + L+  GL    I  T  + LGR
Sbjct: 587 QGLKVRTLKLPDEYLNHGSPEKVLSRIGLDVTGIVNTVFTALGR 630


>gi|89052579|ref|YP_508030.1| 1-deoxy-D-xylulose-5-phosphate synthase [Jannaschia sp. CCS1]
 gi|118595482|sp|Q28WA7.1|DXS1_JANSC RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase 1; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase 1; Short=DXP
           synthase 1; Short=DXPS 1
 gi|88862128|gb|ABD53005.1| 1-deoxy-D-xylulose-5-phosphate synthase [Jannaschia sp. CCS1]
          Length = 639

 Score =  572 bits (1475), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 296/641 (46%), Positives = 406/641 (63%), Gaps = 16/641 (2%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           D+  TP+LD V++P  LK L+  +LK+LA E+R+E+   VSKT     + L  VELTVAL
Sbjct: 3   DRPSTPLLDNVQSPNDLKGLSDFDLKRLADELRAEMIWTVSKTGGHFGAGLGVVELTVAL 62

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H VF  P DK++WDV  Q Y HKILTGRR  + T+R+KDG+SG+T RSES +DPF A H 
Sbjct: 63  HSVFDTPRDKLVWDVSHQCYPHKILTGRRDQMLTIRQKDGLSGFTKRSESPFDPFGAAHS 122

Query: 195 CNSVSAGLGMAVARDIKGKREC----IVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
             S+SA LG AVARD+ G  +      + VI +G    G A+EAM+NAG+L   +IVILN
Sbjct: 123 STSISAALGFAVARDLGGDSDTGHGDAIAVIGDGAMSGGMAFEAMNNAGHLGKRLIVILN 182

Query: 251 DSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVD 310
           D+  S+ P           ALSS LSR+ +   F++ +  AKG    +     E A +  
Sbjct: 183 DNEMSIAPPT--------GALSSYLSRLYAGAPFQEFKAAAKGAVSLLPEPFQEGARRAK 234

Query: 311 EYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR 370
           E  +      G TLFEELG  Y+GP+DGH++E L+SVL+ V +    GP+L+H +T++ +
Sbjct: 235 ELLKSAT--VGGTLFEELGFSYVGPIDGHDMESLLSVLRTVKARAD-GPILIHAITKKGK 291

Query: 371 RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
              + +        +   +    +   + + +Y   F ++L+ EAE D  +V V A M  
Sbjct: 292 GYSEHRADRGHATAKFNIATGEQVKAPSNAPSYTKVFAQSLIAEAEDDPKVVAVTAAMPD 351

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L LF E+FP R FDVG+AEQH VTF+AG+A GGLKPF  I S FLQR YDQVV+DV 
Sbjct: 352 GTGLDLFAERFPSRCFDVGIAEQHGVTFAAGMAAGGLKPFAAIYSTFLQRGYDQVVHDVA 411

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            QRLPVRF I  AGLVG+DG T  G++DI++++ LP  +VMA +DE EL  MV T   ID
Sbjct: 412 IQRLPVRFAIDRAGLVGADGCTHAGSYDISYLANLPGFVVMAAADEAELRHMVRTALEID 471

Query: 551 DRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLS 610
           DRP  FR+PRG  +  D+P  RG  +EIGKG+++ EG  VA+L +G  ++   +A   LS
Sbjct: 472 DRPSAFRFPRGEGMGVDMPD-RGTALEIGKGRMISEGNRVAILNFGTRLKEVQEAAETLS 530

Query: 611 KLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSG 670
           + GI  T+ADARF KPLD  L+ +L ++H  LITVEEG++GGFGSHV+H +A + + D+G
Sbjct: 531 QRGITPTIADARFAKPLDEALILQLARHHEALITVEEGAVGGFGSHVAHLLAENAVFDTG 590

Query: 671 VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
           +K+R +VLPD +I+ ASP    A+AG+    I A  L+ LG
Sbjct: 591 IKYRSMVLPDIFIDQASPKDMYAVAGMNAEDIVAKVLTTLG 631


>gi|150395717|ref|YP_001326184.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sinorhizobium medicae
           WSM419]
 gi|150027232|gb|ABR59349.1| deoxyxylulose-5-phosphate synthase [Sinorhizobium medicae WSM419]
          Length = 637

 Score =  572 bits (1475), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 298/641 (46%), Positives = 408/641 (63%), Gaps = 20/641 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V  P  LK +  ++L QLA E+R+E+   VS+T   L + L  VELT+A+H +F
Sbjct: 4   TPLLDKVRYPDDLKKIDDRDLPQLAAELRAEMVDAVSRTGGHLGAGLGVVELTIAIHKIF 63

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D++++DVG Q Y HKILTGRR  I TLR++DG+SG+T R+ESEYDPF A H   S+
Sbjct: 64  DTPHDRLIFDVGHQCYPHKILTGRRDRIRTLRQEDGLSGFTRRAESEYDPFGAAHSSTSI 123

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVA ++ GK   ++ VI +G   AG A+EA++NAG LD+ +IVILND+  S+ P
Sbjct: 124 SAGLGMAVAAELDGKSRNVIAVIGDGAMSAGMAFEALNNAGALDARLIVILNDNDMSIAP 183

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S+ L+R+ S +++  +REV K +T  +G+ +     +  E+ARG + 
Sbjct: 184 --------PTGAMSAYLARLASGRTYMGIREVGKKLTAYLGKTVDRAITRAVEHARGYV- 234

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G TLFEE+G Y+IGP+DGH+ + L+ VL+ V    + GPVL+HVVT++ +       +
Sbjct: 235 -TGGTLFEEMGFYHIGPIDGHSFDHLLPVLRNVRD-NAKGPVLIHVVTQKGK---GYPPA 289

Query: 379 EAIEKQQEGASDSNSLPFGNY-----SRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
           EA   +  G +  + +          +  Y   F +AL +EA  D  IV + A M     
Sbjct: 290 EAAADKYHGVNKFDVITGAQAKAKPNAPAYTSVFADALTLEASLDDKIVAITAAMPSGTG 349

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L  F    P R FDVG+AEQHAVTF+AGLA  G KPF  + S FLQRAYDQVV+DV  Q 
Sbjct: 350 LDRFASVHPSRCFDVGIAEQHAVTFAAGLAAEGYKPFAALYSTFLQRAYDQVVHDVAIQG 409

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPVRF I  AG VG+DGPT  G+FD T+++ LP  +VMA +DE EL  MV T A+ DD P
Sbjct: 410 LPVRFPIDRAGFVGADGPTHAGSFDTTYLATLPGFVVMAAADEAELKHMVRTAAAYDDGP 469

Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
           + FRYPRG  V  +LP  RG  +EIGKG+V+ +G  VALL +G  + +CL A   L   G
Sbjct: 470 ISFRYPRGEGVGVELP-ERGEILEIGKGRVIKQGSKVALLSFGTRLADCLLAAEDLDAAG 528

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKW 673
           +  TVADARF KPLD  L+R+L ++H  LIT+EEG++GGF SHV  F+A +GL+D G+K 
Sbjct: 529 LSTTVADARFAKPLDHDLIRQLARHHEVLITIEEGAVGGFASHVLQFLAEEGLIDGGLKV 588

Query: 674 RPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTR 714
           RP+++PD ++E A P      AGL    I +T    LG+ R
Sbjct: 589 RPMIMPDVWMEQAKPEAMYTRAGLDRAGIVSTVFKALGQKR 629


>gi|451941627|ref|YP_007462264.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella vinsonii subsp.
           berkhoffii str. Winnie]
 gi|451901014|gb|AGF75476.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella vinsonii subsp.
           berkhoffii str. Winnie]
          Length = 638

 Score =  572 bits (1475), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 309/644 (47%), Positives = 410/644 (63%), Gaps = 29/644 (4%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD +  P  L++L   +L +LA E+R+E    VS T   L + L  +ELTVALH+VF
Sbjct: 6   TPLLDRICVPHDLRALPESDLVKLADELRTETIDAVSVTGGHLGAGLGVIELTVALHYVF 65

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+I+WDVG Q Y HKILTGRR  I TLR++ G+SG+T RSES YDPF AGH   S+
Sbjct: 66  NTPEDRIIWDVGHQAYPHKILTGRRDRIRTLRQEGGLSGFTKRSESVYDPFGAGHSSTSI 125

Query: 199 SAGLGMAVARDIKGK-RECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLH 257
           SAGLGMAV   +K + +  I+TVI +G   AG AYEAM+NAG L++ +IV+LND+  S+ 
Sbjct: 126 SAGLGMAVVSALKAEEKRNIITVIGDGAMSAGMAYEAMNNAGALNARLIVVLNDNDMSIA 185

Query: 258 PKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMI 317
           P           A+S+ L+R+ S  ++R LRE  K + +++ +   + A   +E+ARG +
Sbjct: 186 P--------PTGAMSAHLARLVSRPAYRSLRERIKVLGEKLPKFFLDKARLSEEFARGFL 237

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQK 377
              G TLFEELG YY+GP+DGHN++ L+ VL+ V      GPVLVHVVT + +     + 
Sbjct: 238 --VGGTLFEELGFYYVGPIDGHNLKHLLPVLKNVREY-PHGPVLVHVVTHKGKGYAPAEA 294

Query: 378 SEA---------IEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGM 428
           S           I   ++  + SN L       +Y   F +AL+ EA  D  IV + A M
Sbjct: 295 SSDKYHGVNRFDIVTGKQVKAQSNVL-------SYTKVFSKALIEEATHDDKIVSITAAM 347

Query: 429 EMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVND 488
                L  F EKFPER FDVG+AEQHAVTF+AG+AC G KPF  I S FLQRAYDQ+++D
Sbjct: 348 PTGTGLDAFAEKFPERMFDVGIAEQHAVTFAAGIACEGYKPFVAIYSTFLQRAYDQIIHD 407

Query: 489 VDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVAS 548
           V  Q+LPVRF I  AG VG+DG T  G+FDI F++ LP  +VMAPSDE EL+ MV T A+
Sbjct: 408 VSIQKLPVRFAIDRAGFVGADGATHAGSFDIVFLTTLPEFVVMAPSDEIELMHMVRTAAA 467

Query: 549 IDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARAL 608
            D  P+ FRYPRG  V  DLP  RG  +EIGKG+VL EG  +AL+ +G  +   L+A   
Sbjct: 468 YDQGPLSFRYPRGEGVGMDLP-QRGELLEIGKGRVLREGNRIALVCFGTRMSEVLRAADA 526

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLD 668
           L   G+  TVADARF KPLD  L+R L + H  L+T+EEG+IGGFG+H+  F+A +GLL+
Sbjct: 527 LVAEGLSTTVADARFAKPLDKDLMRCLAREHEILVTIEEGAIGGFGAHLLQFLAQEGLLE 586

Query: 669 SGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
            G+K R + LPD Y+ H SP + L+  GL    I  T  + LGR
Sbjct: 587 YGLKVRTLKLPDEYLNHGSPEKVLSRVGLDAVGIVNTVFTALGR 630


>gi|402825295|ref|ZP_10874597.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingomonas sp. LH128]
 gi|402261169|gb|EJU11230.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingomonas sp. LH128]
          Length = 640

 Score =  572 bits (1475), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 308/636 (48%), Positives = 397/636 (62%), Gaps = 18/636 (2%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V  P  L+ L   +L+QLA E+R+E+ S V +T   L S L  VELTVA+H+VF
Sbjct: 7   TPLLDTVSTPDDLRRLKPAQLRQLADELRTEMISAVGQTGGHLGSGLGVVELTVAIHYVF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             PVD+++WDVG Q Y HKILTGRR  I TLR+  G+SG+T RSESEYDPF   H   S+
Sbjct: 67  DTPVDRLIWDVGHQAYPHKILTGRRDRIRTLRQGGGLSGFTKRSESEYDPFGTAHSSTSI 126

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LG A+   IKG+    + VI +G   AG AYEAM+NA    + ++VILND+  S+ P
Sbjct: 127 SAALGFAMGSKIKGQPGRGIAVIGDGAMSAGMAYEAMNNAREAGNRLVVILNDNDMSIAP 186

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                    +  LS+ L+R+ SS  F  LRE+A+   +++ R +H  A K DE+ARGM  
Sbjct: 187 --------PVGGLSAYLARLVSSGQFLGLRELARKFARKLPRPLHLAAKKTDEFARGMA- 237

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRR---AEDT 375
             G TLFEELG YY+GP+DGH+++ L+ VL+ V   G  GP+LVHVVT++ +    AE  
Sbjct: 238 -MGGTLFEELGFYYVGPIDGHDLDALVPVLENVRDAGE-GPILVHVVTQKGKGYGPAESA 295

Query: 376 -QKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
             K   ++K      +    P G  S  Y   F +ALV EAEKD  I  + A M     L
Sbjct: 296 ADKYHGVQKFDVVTGEQAKAPAGPPS--YTGTFAKALVAEAEKDATICAITAAMPSGTGL 353

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F + FPER FDVG+AEQHAVTF+AGLA  G++PFC I S FLQRA+DQVV+DV  Q L
Sbjct: 354 DKFAQMFPERSFDVGIAEQHAVTFAAGLAAQGMRPFCAIYSTFLQRAFDQVVHDVAIQNL 413

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PVRF I  AGLVG+DG T  G+FD+T+++ LPNM+VMA +DE ELV MV T A  D  P+
Sbjct: 414 PVRFAIDRAGLVGADGATHAGSFDVTYLATLPNMVVMAAADEAELVHMVHTAAQYDAGPI 473

Query: 555 CFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGI 614
            FRYPRG      LP    + +EIGKG+++ EG  VALL  G  +   LKA   L   G+
Sbjct: 474 AFRYPRGNGTGAALPETPQL-LEIGKGRIVREGTKVALLSLGTRLGEALKAADQLEAKGL 532

Query: 615 DVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWR 674
             TVAD RF KPLD  L+R L  +H  ++TVEEGSIGG G+HV    + +GL D+G+K R
Sbjct: 533 STTVADLRFAKPLDTDLIRRLMLSHEVVVTVEEGSIGGLGAHVLTMASDEGLTDAGLKIR 592

Query: 675 PIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
            + LPD + +H  P  Q   AGL    I  T L  L
Sbjct: 593 TMRLPDTFQDHDKPETQYDEAGLNAPQIVNTVLKAL 628


>gi|378825151|ref|YP_005187883.1| hypothetical protein SFHH103_00558 [Sinorhizobium fredii HH103]
 gi|365178203|emb|CCE95058.1| dxs [Sinorhizobium fredii HH103]
          Length = 871

 Score =  572 bits (1475), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 303/639 (47%), Positives = 408/639 (63%), Gaps = 20/639 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V+ P  LK +  ++L QLA E+R+E+   VS+T   L + L  VELT+A+H VF
Sbjct: 238 TPLLDKVDVPDDLKRIDDRDLPQLASELRAEMIDAVSRTGGHLGAGLGVVELTIAIHKVF 297

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D++++DVG Q Y HKILTGRR  I TLR++ G+SG+T R+ESEYDPF A H   S+
Sbjct: 298 DTPHDRLIFDVGHQCYPHKILTGRRDRIRTLRQEGGLSGFTRRAESEYDPFGAAHSSTSI 357

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVA D+ GK   ++ VI +G   AG AYEA++NAG LD+ +IVILND+  S+ P
Sbjct: 358 SAGLGMAVAADLDGKSRNVIAVIGDGALSAGMAYEALNNAGALDARLIVILNDNDMSIAP 417

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S+ L+R+ S +++  +REV K +T  +G+ +     +  E+ARG + 
Sbjct: 418 P--------TGAMSAYLARLASGRTYMGIREVGKKLTAYLGKTVDRAITRAVEHARGYV- 468

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G TLFEE+G Y+IGP+DGH+ + L+ VL+ V      GPVL+HVVT++ +       +
Sbjct: 469 -TGGTLFEEMGFYHIGPIDGHSFDHLLPVLRNVRD-NRRGPVLIHVVTQKGK---GYPPA 523

Query: 379 EAIEKQQEGASDSNSLPFGNY-----SRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
           EA   +  G +  + +          +  Y   F +ALV EA  D  IV + A M     
Sbjct: 524 EAAADKYHGVNKFDVITGAQAKAKPNAPAYTSVFADALVQEASLDDKIVAITAAMPSGTG 583

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L  F    P R FDVG+AEQHAVTF+AGLA  G KPF  + S FLQRAYDQVV+DV  Q 
Sbjct: 584 LDRFAAVHPSRCFDVGIAEQHAVTFAAGLAAEGYKPFAALYSTFLQRAYDQVVHDVAIQG 643

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPVRF I  AG VG+DGPT  G+FD T+++ LP  +VMA +DE EL  MV T A+ DD P
Sbjct: 644 LPVRFPIDRAGFVGADGPTHAGSFDTTYLASLPGFVVMAAADEAELKHMVRTAAAYDDGP 703

Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
           + FRYPRG  V  +LP  RG  + IGKG+++ +G  VALL +G  + +CL A   L   G
Sbjct: 704 ISFRYPRGEGVGVELP-ERGEILPIGKGRIVKQGTKVALLSFGTRLADCLLAAEDLDAAG 762

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKW 673
           +  TVADARF KPLD +L+R+L ++H  L+T+EEG+IGGF SHV HF+A +GLLD G+K 
Sbjct: 763 LSTTVADARFAKPLDHELIRQLARHHEVLVTIEEGAIGGFASHVLHFLAEEGLLDGGLKV 822

Query: 674 RPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
           RP+VLPD ++E A P    A AGL    I +T    LG+
Sbjct: 823 RPMVLPDIWMEQAKPESMYAAAGLDRAGIVSTVFKALGQ 861


>gi|399039198|ref|ZP_10734847.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium sp. CF122]
 gi|398062884|gb|EJL54649.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium sp. CF122]
          Length = 638

 Score =  572 bits (1474), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 303/639 (47%), Positives = 407/639 (63%), Gaps = 20/639 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V  P  L+ L  ++L QLA E+R E+   VS+T   L + L  VELT+A+H VF
Sbjct: 7   TPLLDKVTYPADLRQLEDRDLPQLAREVRDEMIDAVSRTGGHLGAGLGVVELTIAIHSVF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D++++DVG Q Y HKILTGRR  I TLR++DG+SG+T R+ESEYDPF A H   S+
Sbjct: 67  NTPEDRLIFDVGHQCYPHKILTGRRDRIRTLRQEDGLSGFTRRAESEYDPFGAAHSSTSI 126

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVA ++      ++ VI +G   AG AYEA++NAG LD+ +IVILND+  S+ P
Sbjct: 127 SAGLGMAVASELDKTDRRVIAVIGDGAMSAGMAYEALNNAGALDARLIVILNDNDMSIAP 186

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S+ L+R+ S +++   R+  K +T  +G+ +     +  E+ARG + 
Sbjct: 187 --------PTGAMSAYLARLASGRTYMGFRDFGKKLTAYLGKNVDRAITRAVEHARGYV- 237

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G T+FEE+G Y+IGP+DGH+ E L+ VL+ V    + GPVL+HVVT++ +       +
Sbjct: 238 -TGGTMFEEMGFYHIGPIDGHSFEHLLPVLRNVRD-NAEGPVLIHVVTQKGK---GYAPA 292

Query: 379 EAIEKQQEGASDSNSLPFGNY-----SRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
           EA   +  G +  + +          + +Y   F EALV EAE D  IV + A M     
Sbjct: 293 EAAADKYHGVNKFDVITGAQAKVKPNAPSYTSVFAEALVQEAELDDKIVGITAAMPNGTG 352

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L      FP R FDVG+AEQHAVTF+AGLA  G KPF  + S FLQRAYDQVV+DV  Q 
Sbjct: 353 LDKLASVFPSRCFDVGIAEQHAVTFAAGLAAEGFKPFAALYSTFLQRAYDQVVHDVAIQG 412

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPVRF I  AG VG+DGPT  G+FD TF++ LP  +VMA +DE EL  MV T A+ D  P
Sbjct: 413 LPVRFPIDRAGFVGADGPTHAGSFDTTFLATLPGFVVMAAADEAELKHMVRTAAAYDAGP 472

Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
           + FRYPRG  V  ++P  RG  ++IGKG+V+ EG  VALL +G  + +CL A   L   G
Sbjct: 473 ISFRYPRGEGVGIEMPA-RGEILQIGKGRVVKEGSKVALLSFGTRLADCLLAAEDLDAAG 531

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKW 673
           +  TVADARF KPLD +L+R+L ++H  LITVEEG+IGGFGS V  F+A+DGLLD+G+K 
Sbjct: 532 LSTTVADARFAKPLDHELIRQLARHHEILITVEEGAIGGFGSQVIQFLAMDGLLDNGLKI 591

Query: 674 RPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
           R +V+PD ++E A P    A AGL    I +T    LGR
Sbjct: 592 RSLVMPDVWMEQAKPEVMNAHAGLDRAGIVSTVFKALGR 630


>gi|83591394|ref|YP_425146.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodospirillum rubrum ATCC
           11170]
 gi|118595483|sp|Q2RYD6.1|DXS1_RHORT RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase 1; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase 1; Short=DXP
           synthase 1; Short=DXPS 1
 gi|83574308|gb|ABC20859.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Rhodospirillum rubrum ATCC
           11170]
          Length = 645

 Score =  572 bits (1474), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 304/637 (47%), Positives = 398/637 (62%), Gaps = 18/637 (2%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD +  P   + L++ +L+QLA E+R+E+   VS T   L S L  VELTVALHHVF
Sbjct: 7   TPLLDTIRGPSDTRGLSVAQLEQLAREVRAEMIDAVSVTGGHLGSGLGVVELTVALHHVF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+I+WDVG Q Y HKILTGRR  I TLR+  G+SG+T R ES YDPF AGH   S+
Sbjct: 67  DTPDDRIIWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTLREESPYDPFGAGHSSTSI 126

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMA+   + G    +V VI +G+  AG AYEAM+NAG   S +IVILND+  S+ P
Sbjct: 127 SAGLGMAIGSALAGDARDVVAVIGDGSMSAGMAYEAMNNAGAAKSRLIVILNDNDMSIAP 186

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                    + A+S+ LSR+ SSKS+  +R +AK +  R+   +   A + +EYARGM+ 
Sbjct: 187 P--------VGAMSAYLSRLLSSKSWLSIRTLAKEIVARLPDALERTAKRAEEYARGMV- 237

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G TLFEELG YY+GP+DGH ++ L+ VL+ V   G  GPVL+HVVT++ +       +
Sbjct: 238 TGGGTLFEELGFYYVGPIDGHRMDHLVPVLRNVREAGRDGPVLIHVVTQKGK---GYAPA 294

Query: 379 EAIEKQQEGASDSNSL-----PFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
           E    +  G S  N +          + +Y   F + LV  A KD  IV V A M     
Sbjct: 295 ENAPDKYHGVSRFNVVTGVQEKAKPQAPSYTAVFGKQLVAAAAKDHRIVGVTAAMPGGTG 354

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L      +P+R FDVG+AEQHAVTF+AGLAC GLKPF  + S+FLQR YDQVV+DV  Q+
Sbjct: 355 LDKLATAYPQRCFDVGIAEQHAVTFAAGLACEGLKPFVALYSSFLQRGYDQVVHDVVLQK 414

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPVRF I  AG VG+DG T  G FD+ F+ CLPN++VM  +DE EL  MV T A  D  P
Sbjct: 415 LPVRFAIDRAGFVGADGATHGGVFDMAFLGCLPNLVVMCAADEAELARMVVTAAGHDSGP 474

Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
           +  RYPRG  V  ++P     P+ IGKG+++ EGK VALL  G  +Q+CL+A  +L+  G
Sbjct: 475 IALRYPRGEGVGVEIP-EDPQPLAIGKGRIVREGKGVALLSIGTRLQSCLEACEILAARG 533

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKW 673
           +  TVADARF KP D +LV +L   H  LI VEEG+IGGFG+HV+ ++   GLLD G+K 
Sbjct: 534 LTPTVADARFLKPFDEELVADLAARHEVLIVVEEGAIGGFGAHVATWLTNQGLLDGGLKL 593

Query: 674 RPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
           R + +PD + EH +P  Q A AG+    I    L  L
Sbjct: 594 RALHIPDRFFEHDAPEVQCAKAGIDAQAITTAVLDAL 630


>gi|453330452|dbj|GAC87680.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconobacter thailandicus
           NBRC 3255]
          Length = 660

 Score =  572 bits (1474), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 309/652 (47%), Positives = 411/652 (63%), Gaps = 34/652 (5%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+LD V  P  +++L++ +LKQLA E+RSE    VS T   L +SL  VELTVALH VF+
Sbjct: 15  PVLDRVTLPSDMRNLSVDQLKQLADELRSETVDAVSTTGGHLGASLGVVELTVALHAVFN 74

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+I+WDVG Q Y HKILTGRR  I TLR+ +G+SG+T R+ESEYDPF A H   S+S
Sbjct: 75  TPDDRIIWDVGHQAYPHKILTGRRDRIRTLRQPEGLSGFTRRAESEYDPFGAAHSSTSIS 134

Query: 200 AGLGMAVARDIKGKRE------CIVTVISNGTTMAGQAYEAMSNA---GYLDSNMIVILN 250
           AGLGMAVA  ++ + +       ++ VI +G+  AG AYEAM+NA   G   + +IV+LN
Sbjct: 135 AGLGMAVAHHLRAEEDPSYHERNVIAVIGDGSISAGMAYEAMNNAAVAGPGANRLIVVLN 194

Query: 251 DSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVD 310
           D+  S+ P +         ++S+ LSR+ SS+ F  LR++A  + KR+   +   A + +
Sbjct: 195 DNEMSIAPPV--------GSMSNYLSRLMSSRQFFGLRDLAGKVAKRLPGKIERTAKRAE 246

Query: 311 EYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR 370
           EYARGMI   G TLFEELG YY+GPVDGH++  L+ +L+ +      GP+L+H++TE+ R
Sbjct: 247 EYARGMI--TGGTLFEELGFYYVGPVDGHDMTQLVPILRNLRDADDQGPILLHIITEKGR 304

Query: 371 RAEDTQ----KSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHA 426
             +  +    K  A+ K      +    P G  S  Y   F   L+  A+ D  ++ V A
Sbjct: 305 GYKPAEAAGDKYHAVSKFNVVTGEQKKAPAGPPS--YTSVFSRELLRRAKTDDKLITVTA 362

Query: 427 GMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVV 486
            M     L  F + +P+R+FDVG+AEQHAVTF+AG+A  GL+PFC I S FLQRAYDQVV
Sbjct: 363 AMPSGTGLTAFAKAYPDRFFDVGIAEQHAVTFAAGIASEGLRPFCAIYSTFLQRAYDQVV 422

Query: 487 NDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATV 546
           +DV  Q LPVRF I  AGLVG+DG T  G+FD+ ++ CLPNM+VMAPSDE EL+   AT 
Sbjct: 423 HDVALQNLPVRFAIDRAGLVGADGATHAGSFDLNYLCCLPNMVVMAPSDEIELLHATATA 482

Query: 547 ASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKD-------VALLGYGAMV 599
              D  P+ FRYPRG+ +  DLP   G   EIGKG+V+ E +        VA+L  G  +
Sbjct: 483 CEYDAGPIAFRYPRGSGIGLDLP-EEGEVQEIGKGRVVRESRQVPGTRSGVAILSLGTRL 541

Query: 600 QNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSH 659
              L+A   L+  GI VTVADARF KP+D KLV +L   H  LIT+EEG+IGGF S V  
Sbjct: 542 HESLRAADQLAAQGISVTVADARFAKPIDTKLVDDLVAQHEVLITLEEGAIGGFSSLVVQ 601

Query: 660 FIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
            +A  G LD+ VK+RP+ LPD YI+H +P  Q   AGLT  HI  TA + LG
Sbjct: 602 HLAETGKLDT-VKFRPMALPDKYIDHNNPDVQYDEAGLTAPHIVRTAAAALG 652


>gi|319898602|ref|YP_004158695.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella clarridgeiae
           73]
 gi|319402566|emb|CBI76111.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella clarridgeiae
           73]
          Length = 640

 Score =  572 bits (1473), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 309/651 (47%), Positives = 409/651 (62%), Gaps = 31/651 (4%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LDL+  P  L++L    L QLA E+R+E    VS T   L + L  +ELT+ALH+VF
Sbjct: 6   TPLLDLIHLPQDLRALPESNLLQLAHELRTETIDTVSVTGGHLGAGLGVIELTIALHYVF 65

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+I+WDVG QTY HKILTGRR  I TLR++ G+SG+T RSES YDPF AGH   S+
Sbjct: 66  NTPDDRIIWDVGHQTYPHKILTGRRDRIRTLRQEGGLSGFTKRSESVYDPFGAGHSSTSI 125

Query: 199 SAGLGMAVARDIKGK-RECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLH 257
           SAGLGMA+   +K + R  I++VI +G   AG AYEAM+NAG LD+ +IVILND+  S+ 
Sbjct: 126 SAGLGMAMVSALKAEERRNIISVIGDGAISAGMAYEAMNNAGALDARLIVILNDNDMSIA 185

Query: 258 PKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMI 317
           P           A+S+ L+R+ S  S+R LR+  K ++K++ +   E A   +E+AR   
Sbjct: 186 P--------PTGAMSAHLARLVSRPSYRNLRQRIKILSKKLPKFFLEKARYSEEFARSFF 237

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR------- 370
              G TLF+ELG YY+GP+DGHN   L+ VL+ V      GPVLVHVVT + +       
Sbjct: 238 --VGGTLFDELGFYYVGPIDGHNFGHLLPVLKNVRECPD-GPVLVHVVTHKGKGYAPAEA 294

Query: 371 ---RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAG 427
              +     + + I  +Q  A  SNSL       +Y   F +AL+ EA  D  IV + A 
Sbjct: 295 SSDKYHGVNRFDVITGKQVKAQ-SNSL-------SYTKVFSKALIEEATHDNKIVGITAA 346

Query: 428 MEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVN 487
           M     L  F EKFP+R FDVG+AEQHAVTF+AG+A  G KPF  I S FLQRAYDQ+++
Sbjct: 347 MPNGTGLDFFAEKFPKRMFDVGIAEQHAVTFAAGIASEGYKPFVAIYSTFLQRAYDQIIH 406

Query: 488 DVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVA 547
           DV  Q+LPVRF I  AG VG+DG T  G+FDI F++ LP+ ++MAPSDE EL+ MV T A
Sbjct: 407 DVSLQKLPVRFAIDRAGFVGADGATHAGSFDIVFLATLPDFVIMAPSDEVELMHMVRTAA 466

Query: 548 SIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARA 607
           + D  P+ FRYPRG  +  DLP  RG  +EIGKG+VL EG  +AL+ +G  +   L A  
Sbjct: 467 AYDQGPISFRYPRGEGIGMDLP-QRGELLEIGKGRVLCEGSKIALVCFGTRLSEVLVAAD 525

Query: 608 LLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLL 667
            L   G+  TVADARF KPLD  L+R L + H  L+T+EEG+IGGFG+H+  F++ +GLL
Sbjct: 526 ELVVEGLSTTVADARFAKPLDRDLMRRLAREHEVLVTIEEGAIGGFGAHLLQFLSQEGLL 585

Query: 668 DSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALL 718
           + G+K R +  PD Y+ H  P + L+  GL    I  T  S LGR    +L
Sbjct: 586 EHGLKVRTLKFPDKYLNHGLPDKVLSQIGLDATGIINTVFSALGRKLRPIL 636


>gi|319406941|emb|CBI80578.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella sp. 1-1C]
          Length = 640

 Score =  572 bits (1473), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 308/645 (47%), Positives = 406/645 (62%), Gaps = 31/645 (4%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LDL+  P  L++L   +L QLA E+R+E    VS T   L + L  +ELT+ALH+VF
Sbjct: 6   TPLLDLIHLPQDLRALPESDLLQLAHELRTETIDAVSVTGGHLGAGLGVIELTIALHYVF 65

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+I+WDVG QTY HKILTGRR  I TLR++ G+SG+T RSES YDPF AGH   S+
Sbjct: 66  NTPDDRIIWDVGHQTYPHKILTGRRDRIRTLRQEGGLSGFTKRSESVYDPFGAGHSSTSI 125

Query: 199 SAGLGMAVARDIKGK-RECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLH 257
           SAGLGMA+   ++ + +  I++VI +G   AG AYEAM+NAG LD+ +IVILND+  S+ 
Sbjct: 126 SAGLGMAMVSALEAEEKRNIISVIGDGAISAGMAYEAMNNAGALDARLIVILNDNDMSIA 185

Query: 258 PKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMI 317
           P           A+S+ L+R+ S  S+R LRE  K ++K++ +   E A   +E+AR   
Sbjct: 186 P--------PTGAMSAHLARLVSRPSYRSLRERVKILSKKLPKFFLEKARYSEEFARSFF 237

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR------- 370
              G TLF+ELG YY+GP+DGHN   L+ VL+ V      GPVLVHVVT + +       
Sbjct: 238 A--GGTLFDELGFYYVGPIDGHNFGHLLPVLKNVRECPD-GPVLVHVVTHKGKGYPPAEA 294

Query: 371 ---RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAG 427
              +     + + I  +Q  A  S        S +Y   F +AL+ EA+ D  IV + A 
Sbjct: 295 SSDKYHGVNRFDVITGKQVKAQSS--------SLSYTKVFSQALIEEAKHDNKIVGITAA 346

Query: 428 MEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVN 487
           M     L  F EKFP+R FDVG+AEQHAVTF+AG+AC G KPF  I S FLQRAYDQ+V+
Sbjct: 347 MPNGTGLDSFSEKFPKRMFDVGIAEQHAVTFAAGIACEGYKPFVAIYSTFLQRAYDQIVH 406

Query: 488 DVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVA 547
           DV  Q+LPVRF I  AG VG+DG T  G+FDI F++ LP+ +VMAPSDE EL+ MV T A
Sbjct: 407 DVSLQKLPVRFAIDRAGFVGADGATHAGSFDIVFLATLPDFVVMAPSDEVELMHMVRTAA 466

Query: 548 SIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARA 607
           + +  P+ FRYPRG  V  DLP  RG  +EIGKG++L EG  +AL+ +G  +   L A  
Sbjct: 467 AYNQGPISFRYPRGQGVGMDLP-QRGELLEIGKGRLLCEGSKIALVCFGTRLSEVLVAAD 525

Query: 608 LLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLL 667
            L   G+  TVADARF KPLD  L+R L + H  LIT+EEG+IGGFG+H+  F A +GLL
Sbjct: 526 ELVAEGLSTTVADARFAKPLDKDLMRRLAREHEVLITIEEGAIGGFGAHLLQFFAQEGLL 585

Query: 668 DSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
           + G+K R +  PD Y+ H  P + L+  GL    I     S LGR
Sbjct: 586 EHGLKVRTLKFPDEYLNHGLPDKVLSQIGLDATGIINAVFSALGR 630


>gi|241203354|ref|YP_002974450.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium leguminosarum
           bv. trifolii WSM1325]
 gi|240857244|gb|ACS54911.1| deoxyxylulose-5-phosphate synthase [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 638

 Score =  572 bits (1473), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 303/640 (47%), Positives = 406/640 (63%), Gaps = 22/640 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V  P  L+ L  ++L QLA E+R E+   VS+T   L + L  VELT+A+H VF
Sbjct: 7   TPLLDQVIYPADLRKLEDRDLPQLAREVRDEMIDAVSRTGGHLGAGLGVVELTIAIHSVF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D++++DVG Q Y HKILTGRR  I TLR++DG+SG+T R+ESEYDPF A H   S+
Sbjct: 67  DTPDDRLIFDVGHQCYPHKILTGRRDRIRTLRQEDGLSGFTRRAESEYDPFGAAHSSTSI 126

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMA+A D+      ++ VI +G   AG AYEA++NAG LD+ +IVILND+  S+ P
Sbjct: 127 SAGLGMAIAADLDKSDRRVIAVIGDGAMSAGMAYEALNNAGALDARLIVILNDNDMSIAP 186

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S+ L+R+ S +++   R+  K +T  +G+ +     +  E+ARG + 
Sbjct: 187 --------PTGAMSAYLARLASGRTYMGFRDFGKKLTAYLGKNIDRAITRAVEHARGYV- 237

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G T+FEE+G Y+IGP+DGH+ + L+ VL+ V   G  GPVL+HVVT++ +       +
Sbjct: 238 -TGGTMFEEMGFYHIGPIDGHSFDHLLPVLRNVRDNGR-GPVLIHVVTQKGK---GYPPA 292

Query: 379 EAIEKQQEGASDSNSLPFGNYSR------TYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
           EA   +  G +  + +  G  +R      +Y   F EALV EA  D  IV + A M    
Sbjct: 293 EAAADKYHGVNKFDVIT-GAQARVKPNAPSYTSVFAEALVQEAALDDKIVGITAAMPNGT 351

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            L    E +P R FDVG+AEQHAVTF+AGLA  G KPF  + S FLQRAYDQVV+DV  Q
Sbjct: 352 GLDKLAEAYPSRCFDVGIAEQHAVTFAAGLAAEGYKPFAALYSTFLQRAYDQVVHDVAIQ 411

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
            LPVRF I  AG VG+DGPT  G+FD  F++ LP  +VMA +DE EL  MV T  + D  
Sbjct: 412 GLPVRFPIDRAGFVGADGPTHAGSFDTAFLTTLPGFVVMAAADEAELKHMVRTAVAYDAG 471

Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
           P+ FRYPRG  V  D+P  RG  ++IGKG+++ EG  VALL +G  + +CL A   L   
Sbjct: 472 PISFRYPRGEGVGVDMP-VRGEILQIGKGRIVKEGTKVALLSFGTRLADCLLAAEDLDAA 530

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 672
           G+  TVADARF KPLD  L+R+L ++H  +ITVEEGSIGGFGSHV HF+A +GLLD+G+K
Sbjct: 531 GLSTTVADARFAKPLDHDLIRQLARHHEIVITVEEGSIGGFGSHVMHFLATEGLLDNGLK 590

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
            R +V+PD ++E A P    A AGL    I +T    LGR
Sbjct: 591 LRSLVMPDIWMEQAKPEAMNAHAGLDRAGIVSTVFKALGR 630


>gi|414343119|ref|YP_006984640.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconobacter oxydans H24]
 gi|411028454|gb|AFW01709.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconobacter oxydans H24]
          Length = 660

 Score =  572 bits (1473), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 308/652 (47%), Positives = 412/652 (63%), Gaps = 34/652 (5%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+LD V  P  +++L++ +LKQLA E+RSE    VS T   L +SL  VELTVALH VF+
Sbjct: 15  PVLDRVTLPSDMRNLSVDQLKQLADELRSETVDAVSTTGGHLGASLGVVELTVALHAVFN 74

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+I+WDVG Q Y HKILTGRR  I TLR+ +G+SG+T R+ESEYDPF A H   S+S
Sbjct: 75  TPDDRIIWDVGHQAYPHKILTGRRDRIRTLRQPEGLSGFTRRAESEYDPFGAAHSSTSIS 134

Query: 200 AGLGMAVARDIKGKRE------CIVTVISNGTTMAGQAYEAMSNA---GYLDSNMIVILN 250
           AGLGMAVA  ++ + +       ++ VI +G+  AG AYEAM+NA   G   + +IV+LN
Sbjct: 135 AGLGMAVAHHLRAEEDPSYHERNVIAVIGDGSISAGMAYEAMNNAAVAGPGANRLIVVLN 194

Query: 251 DSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVD 310
           D+  S+ P +         ++S+ LSR+ SS+ F  LR++A  + KR+   +   A + +
Sbjct: 195 DNEMSIAPPV--------GSMSNYLSRLMSSRQFFGLRDLAGKVAKRLPGKIERTAKRAE 246

Query: 311 EYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR 370
           EYARGMI   G TLFEELG YY+GPVDGH++  L+ +L+ +      GP+L+H++TE+ R
Sbjct: 247 EYARGMI--TGGTLFEELGFYYVGPVDGHDMTQLVPILRNLRDADDQGPILLHIITEKGR 304

Query: 371 RAEDTQ----KSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHA 426
             +  +    K  A+ K      +    P G  S  Y   F   L+  A+ D  ++ V A
Sbjct: 305 GYKPAEAAGDKYHAVSKFNVVTGEQKKAPAGPPS--YTSVFSRELLRRAKTDDKLITVTA 362

Query: 427 GMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVV 486
            M     L  F + +P+R+FDVG+AEQHAVTF+AG+A  GL+PFC I S FLQRAYDQVV
Sbjct: 363 AMPSGTGLTAFAKAYPDRFFDVGIAEQHAVTFAAGIASEGLRPFCAIYSTFLQRAYDQVV 422

Query: 487 NDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATV 546
           +DV  Q LPVRF I  AGLVG+DG T  G+FD+ ++ CLPNM+VMAPSDE EL+   AT 
Sbjct: 423 HDVALQNLPVRFAIDRAGLVGADGATHAGSFDLNYLCCLPNMVVMAPSDEIELLHATATA 482

Query: 547 ASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKD-------VALLGYGAMV 599
              D  P+ FRYPRG+ +  +LP  +G   EIGKG+V+ E +        VA+L  G  +
Sbjct: 483 CEYDAGPIAFRYPRGSGIGLELP-EKGEVQEIGKGRVVRESRQVPGTRSGVAILSLGTRL 541

Query: 600 QNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSH 659
              L+A   L+  GI VTVADARF KP+D KLV +L   H  LIT+EEG+IGGF S V  
Sbjct: 542 HESLRAADQLAAQGISVTVADARFAKPIDTKLVDDLVAQHEVLITLEEGAIGGFSSLVVQ 601

Query: 660 FIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
            +A  G LD+ VK+RP+ LPD YI+H +P  Q   AGLT  HI  TA + LG
Sbjct: 602 HLAETGKLDT-VKFRPMALPDKYIDHNNPDVQYDEAGLTAPHIVRTAAAALG 652


>gi|159046066|ref|YP_001534860.1| 1-deoxy-D-xylulose-5-phosphate synthase [Dinoroseobacter shibae DFL
           12]
 gi|157913826|gb|ABV95259.1| 1-deoxy-D-xylulose-5-phosphate synthase [Dinoroseobacter shibae DFL
           12]
          Length = 658

 Score =  571 bits (1472), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 312/644 (48%), Positives = 400/644 (62%), Gaps = 31/644 (4%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP LD V  P  LK+LT +EL  LA E+R+E+ S VS+T   L SSL  VELTVA+H VF
Sbjct: 24  TPTLDRVACPADLKALTDRELATLATELRAEVISAVSETGGHLGSSLGVVELTVAIHAVF 83

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P DK++WDVG Q Y HK+LT RR  I TLR+K G+SG+T RSES YDPF A H   S+
Sbjct: 84  NTPFDKLVWDVGHQCYPHKVLTERRDRIRTLRQKGGLSGFTKRSESIYDPFGAAHSSTSI 143

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LG A ARD+ G     + VI +G+  AG AYEAM+NAG     + VILND+  S+ P
Sbjct: 144 SAALGFATARDLGGPTGDAIAVIGDGSISAGMAYEAMNNAGSEKRRLFVILNDNEMSIAP 203

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S+ LS + SS     L+E+A+G+ + +   + E A +      G  G
Sbjct: 204 PT--------GAMSTYLSDLASSGPLYALKELAEGVERSLPGPLREGAQRARNLVTGEHG 255

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
              +TLFEELG  YIGP+DGH+I  L+ VL+   +  S GPVL+H  T + +     + S
Sbjct: 256 -SSATLFEELGFDYIGPIDGHDIPQLLQVLRAARAKAS-GPVLIHACTVKGKGYSPAELS 313

Query: 379 E-----------AIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAG 427
           +           A  KQQ+ A ++ +         Y   F   L  EAE+D  I  V A 
Sbjct: 314 DDCYHGVAKFDVATGKQQKSAPNAPA---------YTKVFGATLTAEAERDSRICAVTAA 364

Query: 428 MEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVN 487
           M     + +  ++FP R FDVG+AEQHAVTF+AGLA GG+KPFC I S+FLQR YDQVV+
Sbjct: 365 MPGGTGVNIMGKRFPGRVFDVGIAEQHAVTFAAGLAAGGMKPFCAIYSSFLQRGYDQVVH 424

Query: 488 DVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVA 547
           DV  Q+LPVRF I  AGLVG+DGPT  GA+DI ++S LPNM VMA +DE ELV MVAT A
Sbjct: 425 DVALQKLPVRFAIDRAGLVGADGPTHAGAYDIAYLSNLPNMTVMAAADEAELVHMVATAA 484

Query: 548 SIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARA 607
           + DD P+ FRYPRG  V  ++P  RG  +EIGKG+++ EG  VA+L  GA +  CLKA  
Sbjct: 485 AYDDGPIAFRYPRGEGVGIEMP-ERGSLLEIGKGRIIREGGSVAILSLGAHLSECLKAAE 543

Query: 608 LLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLL 667
            L   GI VT+ADARF KPLD  L+ +L  NH  LITVE+G+ GGFG+ V H++A  G L
Sbjct: 544 DLEARGIGVTIADARFAKPLDTDLIAQLTANHEALITVEQGAEGGFGAMVLHWLARTGRL 603

Query: 668 DSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
           D  +K R + LPD +I+ ASP      AGLT  HIA   L L+G
Sbjct: 604 DGTLKIRTMTLPDRFIDQASPADMYHDAGLTARHIAGQVLHLMG 647


>gi|83593951|ref|YP_427703.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodospirillum rubrum ATCC
           11170]
 gi|118595487|sp|Q2RR29.1|DXS2_RHORT RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase 2; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase 2; Short=DXP
           synthase 2; Short=DXPS 2
 gi|83576865|gb|ABC23416.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Rhodospirillum rubrum ATCC
           11170]
          Length = 645

 Score =  571 bits (1472), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 304/637 (47%), Positives = 398/637 (62%), Gaps = 18/637 (2%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD +  P   + L++ +L+QLA E+R+E+   VS T   L S L  VELTVALHHVF
Sbjct: 7   TPLLDTIRGPSDTRGLSVAQLEQLAREVRAEMIDAVSVTGGHLGSGLGVVELTVALHHVF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+I+WDVG Q Y HKILTGRR  I TLR+  G+SG+T R ES YDPF AGH   S+
Sbjct: 67  DTPDDRIIWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTLREESPYDPFGAGHSSTSI 126

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMA+   + G    +V VI +G+  AG AYEAM+NAG   S +IVILND+  S+ P
Sbjct: 127 SAGLGMAIGSALAGDARDVVAVIGDGSMSAGMAYEAMNNAGAAKSRLIVILNDNDMSIAP 186

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                    + A+S+ LSR+ SSKS+  +R +AK +  R+   +   A + +EYARGM+ 
Sbjct: 187 P--------VGAMSAYLSRLLSSKSWLSIRTLAKEIVARLPDALERTAKRAEEYARGMV- 237

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G TLFEE+G YY+GP+DGH ++ L+ VL+ V   G  GPVL+HVVT++ +       +
Sbjct: 238 TGGGTLFEEMGFYYVGPIDGHRMDHLVPVLRNVREAGRDGPVLIHVVTQKGK---GYAPA 294

Query: 379 EAIEKQQEGASDSNSL-----PFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
           E    +  G S  N +          + +Y   F + LV  A KD  IV V A M     
Sbjct: 295 ENAPDKYHGVSRFNVVTGVQEKAKPQAPSYTAVFGKQLVAAAAKDHRIVAVTAAMPGGTG 354

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L      +P+R FDVG+AEQHAVTF+AGLAC GLKPF  + S+FLQR YDQVV+DV  Q+
Sbjct: 355 LDKLAAAYPQRCFDVGIAEQHAVTFAAGLACEGLKPFVALYSSFLQRGYDQVVHDVVLQK 414

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPVRF I  AG VG+DG T  G FD+ F+ CLPN++VM  +DE EL  MV T A  D  P
Sbjct: 415 LPVRFAIDRAGFVGADGATHGGVFDMAFLGCLPNLVVMCAADEAELARMVVTAAGHDSGP 474

Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
           +  RYPRG  V  ++P     P+ IGKG+++ EGK VALL  G  +Q+CL+A  +L+  G
Sbjct: 475 IALRYPRGEGVGVEIP-EDPQPLAIGKGRIVREGKGVALLSIGTRLQSCLEACEILAARG 533

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKW 673
           +  TVADARF KP D +LV +L   H  LI VEEG+IGGF SHV+ ++A  GLLD G+K 
Sbjct: 534 LTPTVADARFLKPFDEELVADLAARHEVLIVVEEGAIGGFCSHVATWLANQGLLDGGLKL 593

Query: 674 RPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
           R + +PD + EH +P  Q A AG+    I    L  L
Sbjct: 594 RALHIPDRFFEHDAPEVQCAKAGIDAQAITTAVLDAL 630


>gi|398350482|ref|YP_006395946.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sinorhizobium fredii USDA
           257]
 gi|390125808|gb|AFL49189.1| 1-deoxy-D-xylulose-5-phosphate synthase Dxs [Sinorhizobium fredii
           USDA 257]
          Length = 645

 Score =  571 bits (1472), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 307/641 (47%), Positives = 410/641 (63%), Gaps = 20/641 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V+ P  LK +  K+L QLA E+R+E+   VS+T   L + L  VELT+A+H VF
Sbjct: 12  TPLLDKVDVPDDLKKIDDKDLPQLASELRAEMIDAVSRTGGHLGAGLGVVELTIAIHKVF 71

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D++++DVG Q Y HKILTGRR  I TLR++ G+SG+T R+ESEYDPF A H   S+
Sbjct: 72  DTPHDRLIFDVGHQCYPHKILTGRRDRIRTLRQEGGLSGFTRRAESEYDPFGAAHSSTSI 131

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVA D+ GK   +V VI +G   AG AYEA++NAG LD+ +IVILND+  S+ P
Sbjct: 132 SAGLGMAVAADLDGKSRNVVAVIGDGALSAGMAYEALNNAGALDARLIVILNDNDMSIAP 191

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S+ L+R+ S +++  +REV K +T  +G+ +     +  E+ARG + 
Sbjct: 192 P--------TGAMSAYLARLASGRTYMGIREVGKKLTAYLGKTVDRAITRAVEHARGYV- 242

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G TLFEE+G Y+IGP+DGH+ + L+ VL+ V      GPVL+HVVT++ +       +
Sbjct: 243 -TGGTLFEEMGFYHIGPIDGHSFDHLLPVLRNVRD-NRRGPVLIHVVTQKGK---GYPPA 297

Query: 379 EAIEKQQEGASDSNSLPFGNY-----SRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
           EA   +  G +  + +          +  Y   F +ALV EA  D  IV + A M     
Sbjct: 298 EAAADKYHGVNKFDVITGAQAKAKPNAPAYTSVFADALVQEASLDDKIVAITAAMPSGTG 357

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L  F    P R FDVG+AEQHAVTF+AGLA  G KPF  + S FLQRAYDQVV+DV  Q 
Sbjct: 358 LDRFAAVHPSRCFDVGIAEQHAVTFAAGLAAEGYKPFAALYSTFLQRAYDQVVHDVAIQG 417

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPVRF I  AG VG+DGPT  G+FD T+++ LP  +VMA +DE EL  MV T A+ DD P
Sbjct: 418 LPVRFPIDRAGFVGADGPTHAGSFDTTYLASLPGFVVMAAADEAELKHMVRTAAAYDDGP 477

Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
           + FRYPRG  V  +LP  RG  ++IGKG+++ EG  VALL +G  + +CL A   L   G
Sbjct: 478 ISFRYPRGEGVGVELP-ERGEILQIGKGRIIKEGTKVALLSFGTRLADCLLAAEDLDAAG 536

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKW 673
           +  TVADARF KPLD +L+R+L ++H  LIT+EEG+IGGF SHV HF+A +GLLD G+K 
Sbjct: 537 LSTTVADARFAKPLDQELIRQLARHHEVLITIEEGAIGGFASHVLHFLAEEGLLDGGLKV 596

Query: 674 RPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTR 714
           RP+VLPD ++E A P    A AGL    I +T    LG+ +
Sbjct: 597 RPMVLPDIWMEQAKPESMYASAGLDRAGIVSTVFKALGQKQ 637


>gi|260425522|ref|ZP_05779502.1| 1-deoxy-D-xylulose-5-phosphate synthase [Citreicella sp. SE45]
 gi|260423462|gb|EEX16712.1| 1-deoxy-D-xylulose-5-phosphate synthase [Citreicella sp. SE45]
          Length = 641

 Score =  571 bits (1471), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 312/647 (48%), Positives = 403/647 (62%), Gaps = 34/647 (5%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V  P  LK L+  EL+QLA E+R+E  + VS+T   L + L  VELTVALH VF
Sbjct: 7   TPLLDRVITPADLKRLSDAELEQLAHELRAETIAAVSQTGGHLGAGLGVVELTVALHAVF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
            AP DKI+WDV  Q Y HKILTGRR  I TLR KDG+SG+T RSES +DPF AGH   S+
Sbjct: 67  DAPRDKIIWDVSHQAYPHKILTGRRDRIRTLRMKDGLSGFTKRSESPFDPFGAGHSSTSI 126

Query: 199 SAGLGMAVARDIKGKREC----IVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
           SA LG AVARD+ G  +      + VI +G   AG AYEAM+NAG+L   +IVILND+  
Sbjct: 127 SAALGFAVARDLGGVCDTGSGDAIAVIGDGAMSAGMAYEAMNNAGHLGKRLIVILNDNEM 186

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+ P           A+SS LSR+ +   F+ L+  AKG    +     E A +  E  +
Sbjct: 187 SIAP--------PTGAMSSYLSRLYAEAPFQDLKAAAKGAVSLLPGPFREGAKRAKEVLK 238

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---- 370
            M    G TLFEELG  YIGP+DGH++  L+ +L+ V +  + GP+L+HV+T++ +    
Sbjct: 239 TMT--VGGTLFEELGFDYIGPLDGHDLHQLLPILRTVKARAT-GPILLHVLTKKGKGYAP 295

Query: 371 ------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVV 424
                 R     K + +  +Q+  S SN+        +Y   F   L   A +D  I  V
Sbjct: 296 AEGAADRGHARAKFDLVTGEQK-KSPSNA-------PSYTKIFARELTRLAAEDSRICAV 347

Query: 425 HAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQ 484
            A M     L L  E++P R FDVG+AEQH VTFSAGLA GGLKPFC + S FLQR YDQ
Sbjct: 348 TAAMPDGTGLDLMAERYPSRVFDVGIAEQHGVTFSAGLAAGGLKPFCAMYSTFLQRGYDQ 407

Query: 485 VVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVA 544
           VV+DV  QRLPVRF I  AGLVG+DG T  GAFDI FM+ LP M+VMA +DE EL+ MVA
Sbjct: 408 VVHDVAIQRLPVRFAIDRAGLVGADGATHAGAFDIAFMANLPGMVVMAAADEAELMHMVA 467

Query: 545 TVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLK 604
           T A+ D+ P+ FRYPRG     ++P  +G P+EIG+G+++ EG  +A+L +G  +   +K
Sbjct: 468 TAAAHDEGPIAFRYPRGEGSGVEMP-EKGEPLEIGRGRLVREGARLAILSFGTRLSEVMK 526

Query: 605 ARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALD 664
           A   LS  GI  TVADARF KPLD +L+ +L   H  LIT+EEGS+GGFGSHV   ++ +
Sbjct: 527 ACERLSARGISPTVADARFAKPLDRELILKLAAEHEALITIEEGSVGGFGSHVVQLLSEE 586

Query: 665 GLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
           G LD G+K+R +VLPD +I+HASP      AGL   HI    L+ LG
Sbjct: 587 GALDHGLKFRSMVLPDTFIDHASPNDMYEAAGLDARHIEEKVLTTLG 633


>gi|83951989|ref|ZP_00960721.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseovarius nubinhibens
           ISM]
 gi|83836995|gb|EAP76292.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseovarius nubinhibens
           ISM]
          Length = 621

 Score =  571 bits (1471), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 303/631 (48%), Positives = 408/631 (64%), Gaps = 34/631 (5%)

Query: 98  ELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYAHK 157
           EL+QLA E+R+E  S VS+T   L + L  VELTVALH VF AP DKI+WDV  Q Y HK
Sbjct: 5   ELRQLADELRAETISAVSQTGGHLGAGLGVVELTVALHAVFDAPRDKIIWDVSHQCYPHK 64

Query: 158 ILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKREC- 216
           ILTGRR  + TLR+KDG+SG+T RSES YDPF A H   S+SA LG AVARD+ G  E  
Sbjct: 65  ILTGRRDRMRTLRQKDGLSGFTKRSESPYDPFGAAHSSTSISAALGFAVARDLGGASETG 124

Query: 217 ---IVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKIEESPKTSINALSS 273
               + VI +G   AG A+EAM+NAG+L   MIVILND+  S+ P +         ALSS
Sbjct: 125 HGDAIAVIGDGAMSAGMAFEAMNNAGHLKKRMIVILNDNEMSIAPPV--------GALSS 176

Query: 274 TLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEELGLYYI 333
            LSR+ +   F++L+  AKG    +     E A +  +  +G+    G TLFEELG  Y+
Sbjct: 177 YLSRLYAEAPFQELKAAAKGAVSLLPGPFQEGAKRARDMLKGLA--VGGTLFEELGFSYL 234

Query: 334 GPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR------RAED----TQKSEAIEK 383
           GP+DGH+++ L+ VL+ V    + GP+L+HV+T++ +       A D    T K + +  
Sbjct: 235 GPIDGHDMDQLLPVLRTVQDRAT-GPILIHVLTKKGKGYGPAEAARDGGHATAKFDVVTG 293

Query: 384 QQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPE 443
           +Q+  S SN+        +Y   F +A++  A +D+ I  V A M     L+LF+E++P 
Sbjct: 294 KQK-KSPSNA-------PSYTAVFSDAILAHAAEDQRICAVTAAMPDGTGLKLFEERYPS 345

Query: 444 RYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSA 503
           R FDVG+AEQHAVTF+AGLA GGL+PFC + S FLQR YDQVV+DV  QRLPVRF I  A
Sbjct: 346 RCFDVGIAEQHAVTFAAGLAAGGLRPFCALYSTFLQRGYDQVVHDVAIQRLPVRFAIDRA 405

Query: 504 GLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYPRGAI 563
           GLVG+DG T  G++D+ F++ LP M+VMA +DE ELV MVAT A+ D+ P+ FRYPRG  
Sbjct: 406 GLVGADGATHAGSYDVAFLANLPGMVVMAAADEAELVHMVATAAAHDEGPIAFRYPRGEG 465

Query: 564 VRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARF 623
           V  ++P  RG+P+EIGKG+++ EGK VA+L +G  +    +A   L   GI  T+ADARF
Sbjct: 466 VGVEMPD-RGVPLEIGKGRIIQEGKGVAILSFGTRLGEVRRAAEALGARGITPTIADARF 524

Query: 624 CKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYI 683
            KPLD  ++ +L   H  LIT+EEG++GGFGSHV+  ++ +G+ D G+K+R +VLPD +I
Sbjct: 525 AKPLDRDMILDLAARHEALITIEEGAVGGFGSHVAQLLSEEGVFDHGLKFRQMVLPDIFI 584

Query: 684 EHASPTQQLALAGLTGHHIAATALSLLGRTR 714
           + ASP     +AGL+   I A  L LLG  R
Sbjct: 585 DQASPEDMYRVAGLSAEDIEAKVLELLGVAR 615


>gi|395784738|ref|ZP_10464560.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella melophagi K-2C]
 gi|395421998|gb|EJF88220.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella melophagi K-2C]
          Length = 640

 Score =  571 bits (1471), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 309/645 (47%), Positives = 405/645 (62%), Gaps = 31/645 (4%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD +  P  L+     +L QLA E+R+E    VS T   L + L  VELT+ALH+VF
Sbjct: 6   TPLLDRICFPQDLRVFPESDLVQLADELRAETIDAVSVTGGHLGAGLGVVELTIALHYVF 65

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P DKI+WDVG QTY HKILTGRR  I TLR+  G+SG+T RSES YD F AGH   S+
Sbjct: 66  NTPDDKIIWDVGHQTYPHKILTGRRDKIRTLRQDGGLSGFTKRSESVYDSFGAGHSSTSI 125

Query: 199 SAGLGMAVARDIKGK-RECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLH 257
           SAGLGMAVA  +K + R  I+ VI +G   AG AYEAM+NAG LD+ +IVILND+  S+ 
Sbjct: 126 SAGLGMAVASMLKAEERRNIICVIGDGAMSAGMAYEAMNNAGALDARLIVILNDNDMSIA 185

Query: 258 PKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMI 317
           P           A+S+ L+R+ S  S+R LRE  K ++K++ +   + A   +E+ARG +
Sbjct: 186 P--------PTGAMSAYLARLVSRPSYRSLREQVKILSKKLPKFFSDKARLSEEFARGFL 237

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR------- 370
              G +LFEELG YY+GP+DGHN+  L+ VL+ V    + GPVLVHVVT + +       
Sbjct: 238 --VGGSLFEELGFYYVGPIDGHNMNHLLPVLKNVREYPN-GPVLVHVVTHKGKGYAPAEV 294

Query: 371 ---RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAG 427
              +     + + +  +Q   + S  LP       Y   F +AL+ EA  D  IV + A 
Sbjct: 295 SSDKYHGVNRFDVVTGKQV-KTQSKFLP-------YTKVFSKALIEEASHDDKIVAITAA 346

Query: 428 MEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVN 487
           M     L  F EKFP+R FDVG+AEQHAVTF+AG+AC G KPF  I S FLQRAYDQ+++
Sbjct: 347 MPTGTGLDSFAEKFPDRMFDVGIAEQHAVTFAAGIACEGYKPFVAIYSTFLQRAYDQIIH 406

Query: 488 DVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVA 547
           DV  Q+LPVRF I  AG VG+DG T  G+FDI F++ LP  +VMAPSDE EL+ MV T A
Sbjct: 407 DVSIQKLPVRFAIDRAGFVGADGATHAGSFDIVFLATLPEFVVMAPSDEVELMHMVRTAA 466

Query: 548 SIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARA 607
           + D  P+ FRYPRG     DLP  RG  +EIGKG++L EG  +AL+ +G  +   L A  
Sbjct: 467 TYDQGPISFRYPRGESSGIDLP-QRGEVLEIGKGRILCEGSKIALVCFGTRLSEVLIAAN 525

Query: 608 LLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLL 667
            L+  G+  TVADARF KPLD  L+  L + H  LIT+EEG++GGFG+HV  F+A +GLL
Sbjct: 526 ELAAEGLSTTVADARFAKPLDKDLILRLAREHEVLITIEEGAMGGFGAHVLQFLAQEGLL 585

Query: 668 DSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
           + G+K R +  PD Y+ H SP + L+  GL    I  T  + LGR
Sbjct: 586 EHGLKVRTLKFPDEYLNHGSPNKVLSSIGLDATGIINTVFNALGR 630


>gi|84500606|ref|ZP_00998855.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oceanicola batsensis
           HTCC2597]
 gi|84391559|gb|EAQ03891.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oceanicola batsensis
           HTCC2597]
          Length = 642

 Score =  570 bits (1470), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 305/650 (46%), Positives = 411/650 (63%), Gaps = 34/650 (5%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           D+  TP+LD V+ P  L   +  EL+Q+A E+R+E  S VS+T   L + L  +ELTVAL
Sbjct: 3   DRPDTPLLDQVQEPGDLNKFSDAELRQVAHELRAETISAVSQTGGHLGAGLGVIELTVAL 62

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H ++ AP D+I+WDV  QTY HKILTGRR  I TLR+KDG+SG+T RSES YD F A H 
Sbjct: 63  HAIWDAPRDRIVWDVSHQTYPHKILTGRRDRIRTLRQKDGLSGFTKRSESPYDCFGAAHS 122

Query: 195 CNSVSAGLGMAVARDIKGKREC----IVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
             S+SA LG AVARD+ G  E      + VI +G   AG A+EAM+NAG L   +IVILN
Sbjct: 123 STSISAALGFAVARDLGGAPEHGIGDAIAVIGDGAMSAGMAFEAMNNAGSLGKRLIVILN 182

Query: 251 DSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVD 310
           D+  S+ P +         A S+ LSR+ + + F++L+  AKGM   +     E A +  
Sbjct: 183 DNDMSIAPPV--------GAFSNYLSRLYAEEPFQELKAAAKGMASLLPPPFQEGAKRAK 234

Query: 311 EYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR 370
           +  +GM    G TLFEELG  YIGP+DGH++  L+ +L+ V +  + GPVLVHVVT++ +
Sbjct: 235 DMLKGMA--MGGTLFEELGFSYIGPIDGHDMSQLLPILRTVKARAA-GPVLVHVVTKKGK 291

Query: 371 ------RAED----TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKD 420
                 RA D    T K + I  +Q+ A  +        + +Y   F + LV  A +D+ 
Sbjct: 292 GYGPAERASDKGHATAKFDVISGEQKKAPSN--------APSYTSVFGKELVRLAGEDQR 343

Query: 421 IVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQR 480
           +  V A M     L L  E++P R FDVG+AEQH VTF+AGLA GG++PFC I S FLQR
Sbjct: 344 VCAVTAAMPDGTGLNLMAERYPSRTFDVGIAEQHGVTFAAGLAAGGMRPFCAIYSTFLQR 403

Query: 481 AYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELV 540
            YDQVV+DV  QRLPVRF I  AGLVG+DG T  G+FD+++++ LP  +VMA +DE EL+
Sbjct: 404 GYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGSFDVSYLTNLPGFVVMAAADEAELM 463

Query: 541 DMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQ 600
            MVAT A+ D+ P+ FRYPRG     D+P  +G+P+EIGKG+++ +G  VA+L YG  ++
Sbjct: 464 HMVATAAAHDEGPIAFRYPRGEGAGVDMPD-KGVPLEIGKGRMIRDGSRVAILSYGTRLK 522

Query: 601 NCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHF 660
             L A   L   GI  TVADARF KPLD  LV  L  +H  LIT+EEG++GGFGSHV+  
Sbjct: 523 EVLDACEALEARGIRPTVADARFAKPLDRDLVLNLAADHEALITIEEGAVGGFGSHVAQL 582

Query: 661 IALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
           +A +G+ D G+++R +VLPD +I+ ASP    A AGL    I A  L +L
Sbjct: 583 LANEGVFDDGLRFRSMVLPDTFIDQASPADMYATAGLNAPDIEAKVLEVL 632


>gi|349686639|ref|ZP_08897781.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconacetobacter
           oboediens 174Bp2]
          Length = 654

 Score =  570 bits (1470), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 310/653 (47%), Positives = 413/653 (63%), Gaps = 35/653 (5%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P LD V  P  +++L++++LKQLA E+RSE    VS T   L +SL  VELTVALH VF 
Sbjct: 8   PQLDRVRMPHDMRNLSVEQLKQLAEELRSETIDAVSTTGGHLGASLGVVELTVALHAVFD 67

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG Q Y HKILTGRR  I TLR+  G+SG+T RSESEYDPF A H   S+S
Sbjct: 68  TPDDRVIWDVGHQAYPHKILTGRRERIRTLRQPGGLSGFTRRSESEYDPFGAAHSSTSIS 127

Query: 200 AGLGMAVARDIKG------KRECIVTVISNGTTMAGQAYEAMSNAGYLD---SNMIVILN 250
           AGLGMAVA  ++       +   ++ VI +G+  AG AYEAM+NA +       +IV+LN
Sbjct: 128 AGLGMAVAHHLRAEEDPSYRERNVIAVIGDGSISAGMAYEAMNNASHCGPGAERLIVVLN 187

Query: 251 DSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVD 310
           D+  S+ P +         A+S+ LSR+ SS+ F  LRE+A  M KR+   +   A K D
Sbjct: 188 DNEMSIAPPV--------GAMSNYLSRLMSSRKFLSLRELAAKMAKRLPGRLERTAKKAD 239

Query: 311 EYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN- 369
           EYARG++   G TLFEELG YY+GPVDGH++  L+ +L+ +     +GPVL+HV+TE+  
Sbjct: 240 EYARGIM--TGGTLFEELGFYYVGPVDGHDMNQLVHILRNLRDAEDVGPVLLHVITEKGH 297

Query: 370 --RRAEDT-QKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHA 426
             + AE    K  A+ K      +    P G  S  Y   F + LV +A  D  IV + A
Sbjct: 298 GYKPAESAGDKYHAVSKFNVVTGEQKKGPSGPPS--YTSVFAKELVRQASTDDRIVTITA 355

Query: 427 GMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVV 486
            M     L  F   +P+R+FDVG+AEQHAVTF+AG+A  GL+PFC I S FLQRAYDQV+
Sbjct: 356 AMPSGTGLDKFARAYPDRFFDVGIAEQHAVTFAAGMATEGLRPFCAIYSTFLQRAYDQVM 415

Query: 487 NDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATV 546
           +DV  Q+LPVRF I  AGLVG+DG T  GAFDI ++ CLP M +MAPS+E EL+ M AT 
Sbjct: 416 HDVVLQKLPVRFAIDRAGLVGADGATHAGAFDIAYLGCLPGMTLMAPSNELELLHMTATS 475

Query: 547 ASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVE-----GKD---VALLGYGAM 598
            + D+ P+  RYPRG  +  +LP    I +EIG+G+++ E     G +   +A+L  G  
Sbjct: 476 IAFDEGPIGLRYPRGGGLGLELPAAGQI-LEIGRGRIVREMTRQSGPEQGGIAILSLGPR 534

Query: 599 VQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVS 658
           + + LKA  +L+  G+  TVADARF KP+D  LV +L +NH  LIT+EEGS+GGFGS+V 
Sbjct: 535 LADALKAADMLAAQGLSPTVADARFAKPIDTALVEQLARNHAVLITIEEGSVGGFGSYVM 594

Query: 659 HFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
             +A  GLLD  V++RP+ LPD +I+H +   Q   AGL    I ATALS LG
Sbjct: 595 THLAKTGLLDR-VRFRPMTLPDRFIDHNTQAAQYHEAGLDAPAIVATALSALG 646


>gi|294678978|ref|YP_003579593.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacter capsulatus SB
           1003]
 gi|294477798|gb|ADE87186.1| 1-deoxy-D-xylulose-5-phosphate synthase-2 [Rhodobacter capsulatus
           SB 1003]
          Length = 636

 Score =  570 bits (1470), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 303/643 (47%), Positives = 404/643 (62%), Gaps = 30/643 (4%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TPILD V  P  +K L+ ++L +LA E+R+E  S VS T   L + L  VELTVALH VF
Sbjct: 7   TPILDRVRLPSDMKGLSDRDLHRLADELRAETISAVSVTGGHLGAGLGVVELTVALHAVF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P DKI+WDVG Q Y HKILTGRR  I TLR + G+SG+T RSES YD F AGH   S+
Sbjct: 67  DCPRDKIIWDVGHQCYPHKILTGRRDRIRTLRTRGGLSGFTKRSESPYDAFGAGHSSTSI 126

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LG  +AR++  +    + VI +G    G A+EA+++ G+L   M VILND+  S+ P
Sbjct: 127 SAALGFTMARELGSECGDAIAVIGDGAMTGGMAFEALNHGGHLGKRMFVILNDNEMSISP 186

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                    + ALSS L+R+ +    + L+ +AKG    +     E A +  E  +GM  
Sbjct: 187 --------PVGALSSYLTRLYAEAPMQDLKAMAKGAVSLLPEPFQEGARRAKEMLKGMT- 237

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTE--------ENR 370
             G TLFEELG  Y+GPVDGH++E L+ + + + +  + GPVL+H +T+        ENR
Sbjct: 238 -IGGTLFEELGFDYVGPVDGHDLETLLHLFRTLKTRAT-GPVLIHALTKKGKGYAPAENR 295

Query: 371 --RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGM 428
             R   T + + +   Q  A+ +        + +Y   F E+L+ +A +D+ IV V A M
Sbjct: 296 PDRGHATARFDVLTGAQVKAASN--------APSYTKVFAESLIDQASRDEKIVAVTAAM 347

Query: 429 EMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVND 488
                L LF E+FP R FDVG+AEQH VTFSAGLA GG+KPFC I S FLQR YDQ+V+D
Sbjct: 348 PEGTGLNLFAERFPRRCFDVGIAEQHGVTFSAGLAAGGMKPFCAIYSTFLQRGYDQIVHD 407

Query: 489 VDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVAS 548
           V  QRLPVRF I  AGLVG+DG T  GAFDI FM+ LP M+VMA +DE +LV MVAT A+
Sbjct: 408 VAIQRLPVRFAIDRAGLVGADGATHAGAFDIGFMANLPGMVVMAAADEADLVHMVATAAA 467

Query: 549 IDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARAL 608
            D+ P+ FRYPRG  +  D+P  +G+P+EIGKG+++ EG  VA+L +G  +   LKAR  
Sbjct: 468 HDEGPIAFRYPRGEGMGVDMP-TQGVPLEIGKGRIISEGARVAILSFGTRLAEVLKAREA 526

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLD 668
           L+  G+  TVADARF KPLD  L+  L   H  LI +EEG++GGFGSHV+ F++  G+ D
Sbjct: 527 LAARGLAPTVADARFAKPLDKDLILRLVAEHEALICIEEGAVGGFGSHVAQFLSEQGVFD 586

Query: 669 SGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
            G K+R +VLPD +I+HA+P    A+A +    I A  L LLG
Sbjct: 587 RGYKFRSMVLPDTFIDHANPEDMYAVARMNAADIEAKVLDLLG 629


>gi|319403927|emb|CBI77515.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella rochalimae ATCC
           BAA-1498]
          Length = 640

 Score =  570 bits (1469), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 311/645 (48%), Positives = 407/645 (63%), Gaps = 31/645 (4%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LDL+  P  L++L   +L QLA E+R+E    VS T   L + L  VELT+ALH+VF
Sbjct: 6   TPLLDLIHLPQDLRALPESDLLQLAHELRTETIDAVSVTGGHLGAGLGVVELTIALHYVF 65

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+I+WDVG QTY HKILTGRR  I TLR++ G+SG+T RSES YDPF AGH   S+
Sbjct: 66  NTPDDRIIWDVGHQTYPHKILTGRRDRIRTLRQEGGLSGFTKRSESVYDPFGAGHSSTSI 125

Query: 199 SAGLGMAVARDIKGK-RECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLH 257
           SAGLGMA+   ++ + +  I++VI +G   AG AYEAM+NAG LD+ +IVILND+  S+ 
Sbjct: 126 SAGLGMAMVSALEAEEKRNIISVIGDGAISAGMAYEAMNNAGALDARLIVILNDNDMSI- 184

Query: 258 PKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMI 317
                SP     A+S+ L+R+ S  S+R LRE  + ++K++ +   E A   +E+AR   
Sbjct: 185 ----ASPT---GAMSAHLARLVSRPSYRSLRERVRILSKKLPKFFSEKARYSEEFARSFF 237

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQK 377
              G TLF+ELG YY+GP+DGHN   L+ VL+ V      GPVLVHVVT + +     + 
Sbjct: 238 A--GGTLFDELGFYYVGPIDGHNFGHLLPVLKNVRECPD-GPVLVHVVTHKGKGYPPAEA 294

Query: 378 S----------EAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAG 427
           S          + I  +Q  A  S        S +Y   F +AL+ EA  D  IV + A 
Sbjct: 295 SSDKYHGVNCFDVITGKQVKAQSS--------SLSYTKVFSQALIEEATHDNKIVGITAA 346

Query: 428 MEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVN 487
           M     L  F EKFP+R FDVG+AEQHAVTF+AG+AC G KPF  I S FLQRAYDQ+V+
Sbjct: 347 MPNGTGLDSFSEKFPKRMFDVGIAEQHAVTFAAGIACEGYKPFVAIYSTFLQRAYDQIVH 406

Query: 488 DVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVA 547
           DV  Q+LPVRF I  AG VG+DG T  G+FDI F++ LP+ +VMAPSDE EL+ MV T A
Sbjct: 407 DVSLQKLPVRFAIDRAGFVGADGATHAGSFDIVFLATLPDFVVMAPSDEVELMHMVRTAA 466

Query: 548 SIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARA 607
           + D  P+ FRYPRG  V  DLP  RG  +EIGKG++L EG  +AL+ +G  +   L A  
Sbjct: 467 AYDQGPISFRYPRGQGVGMDLP-QRGELLEIGKGRLLCEGSKIALVCFGTRLSEVLVAAD 525

Query: 608 LLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLL 667
            L   G+  TVADARF KPLD  L+R L + H  LIT+EEG+IGGFG+H+  F+A +GLL
Sbjct: 526 ELVAEGLSTTVADARFAKPLDKDLMRRLAREHEVLITIEEGAIGGFGAHLLQFLAQEGLL 585

Query: 668 DSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
           + G+K R +  PD Y+ H  P + L+  GL    I     S LGR
Sbjct: 586 EHGLKVRTLKFPDEYLNHGLPDKVLSQIGLDATGIINAVFSALGR 630


>gi|397675987|ref|YP_006517525.1| 1-deoxy-D-xylulose-5-phosphate synthase [Zymomonas mobilis subsp.
           mobilis ATCC 29191]
 gi|395396676|gb|AFN56003.1| 1-deoxy-D-xylulose-5-phosphate synthase [Zymomonas mobilis subsp.
           mobilis ATCC 29191]
          Length = 649

 Score =  569 bits (1467), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 305/645 (47%), Positives = 399/645 (61%), Gaps = 18/645 (2%)

Query: 73  FWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTV 132
            +  + TP+LD ++ P  L+ L    L+QLA E+R E  S V  T   L S L  +ELTV
Sbjct: 1   MFPNDKTPLLDKIKTPAELRQLDRNSLRQLADELRKETISAVGVTGGHLGSGLGVIELTV 60

Query: 133 ALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAG 192
           ALH+VF+ P D ++WDVG QTY HKILTGRR  I TLR++DG+SG+T R+ESEYD F A 
Sbjct: 61  ALHYVFNTPKDALVWDVGHQTYPHKILTGRRDRIRTLRQRDGLSGFTQRAESEYDAFGAA 120

Query: 193 HGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDS 252
           H   S+SA LG A+A  +    +  V +I +G+  AG AYEAM+NA      +IVILND+
Sbjct: 121 HSSTSISAALGFAMASKLSDSDDKAVAIIGDGSMTAGMAYEAMNNAKAAGKRLIVILNDN 180

Query: 253 RHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEY 312
             S+ P         + ALSS LSR+ SS+ F  LR++ +G+  R+ +G+   A K DEY
Sbjct: 181 EMSISP--------PVGALSSYLSRLISSRPFMNLRDIMRGVVNRMPKGLATAARKADEY 232

Query: 313 ARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRR- 371
           ARGM    G T FEELG YY+GPVDGHN++ LI VL+ V      GP+LVHVVT + +  
Sbjct: 233 ARGMA--TGGTFFEELGFYYVGPVDGHNLDQLIPVLENVRDAKD-GPILVHVVTRKGQGY 289

Query: 372 --AEDTQ-KSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGM 428
             AE  + K  A+++    +      P G  S  Y   F E L+ EA++D  IV + A M
Sbjct: 290 APAEAAKDKYHAVQRLDVVSGKQAKAPPGPPS--YTSVFSEQLIKEAKQDDKIVTITAAM 347

Query: 429 EMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVND 488
                L  FQ+ FPER FDVG+AEQHAVTF+AGLA  G KPFC + S FLQR YDQ+V+D
Sbjct: 348 PTGTGLDRFQQYFPERMFDVGIAEQHAVTFAAGLAAAGYKPFCCLYSTFLQRGYDQLVHD 407

Query: 489 VDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVAS 548
           V  Q LPVRF +  AGLVG+DG T  G+FDI FM  LPNM+VMAPSDE EL +MV T+A 
Sbjct: 408 VAIQNLPVRFAVDRAGLVGADGATHAGSFDIAFMVNLPNMVVMAPSDEGELANMVHTMAH 467

Query: 549 IDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARAL 608
            D  P+  RYPRG  V   L G + I + IGKG+++  GK VA+L  G  ++  LKA   
Sbjct: 468 YDQGPISVRYPRGNGVGVSLEGEKEI-LPIGKGRLIRRGKKVAILSLGTRLEESLKAADR 526

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLD 668
           L   G+  +VAD RF KPLD  L R+L ++H  +IT+EEG++GGF + V    + +GL+D
Sbjct: 527 LDAQGLSTSVADMRFAKPLDEALTRQLLKSHQVIITIEEGALGGFATQVLTMASDEGLMD 586

Query: 669 SGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRT 713
            G+K R + LPD +       +Q A AGL    I A  +S L R 
Sbjct: 587 DGLKIRTLRLPDRFQPQDKQERQYAEAGLDADGIVAAVISALHRN 631


>gi|254418670|ref|ZP_05032394.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brevundimonas sp. BAL3]
 gi|196184847|gb|EDX79823.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brevundimonas sp. BAL3]
          Length = 636

 Score =  569 bits (1467), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 301/643 (46%), Positives = 401/643 (62%), Gaps = 29/643 (4%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V+ P  ++   I +LKQLA E+R+E    VS T   L + L  VELT ALHHVF
Sbjct: 4   TPLLDTVKFPADMRGFDIAQLKQLAQEVRAETIDAVSVTGGHLGAGLGVVELTTALHHVF 63

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D ++WDVG Q Y HKILTGRR  I TLR+  G+SG+T RSESEYDPF A H   S+
Sbjct: 64  ETPKDILIWDVGHQCYPHKILTGRRDRIRTLRQPGGLSGFTKRSESEYDPFGAAHASTSI 123

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAG-YLDSNMIVILNDSRHSLH 257
           SA LG A ARD KG++  +V VI +G+  AG AYEAM+NA    +  ++VILND+  S+ 
Sbjct: 124 SAALGFAAARDQKGEKNKVVAVIGDGSMSAGMAYEAMNNAAEATNGQLMVILNDNDMSIA 183

Query: 258 PKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMI 317
           P +          +S+ L+ + S  +++ +R + + + + + R     A K +EYARGM+
Sbjct: 184 PPV--------GGMSAYLAGLVSGGAYQNVRRLGRSVAQHLPRPFRNAAKKAEEYARGMV 235

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQK 377
              G TLFEELG YY+GP+DGH++E+L+ +L++ A++    PVLVHVVT++ +     + 
Sbjct: 236 --TGGTLFEELGFYYVGPIDGHDMENLVPILKKAAAIEDR-PVLVHVVTQKGKGYAPAES 292

Query: 378 S----EAIEK-----QQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGM 428
           S     A+ K      ++  S SN+        +Y   F   L+  A  D  IV + A M
Sbjct: 293 SADKLHAVVKFDVVSGKQAKSVSNA-------PSYTKVFGTELIKHAALDPSIVAITAAM 345

Query: 429 EMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVND 488
                L LF + FP+R +DVG+AEQHAVTF+AGLA  G+KP C I S FLQR YDQVV+D
Sbjct: 346 PSGTGLDLFGQAFPDRTYDVGIAEQHAVTFAAGLAADGMKPVCAIYSTFLQRGYDQVVHD 405

Query: 489 VDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVAS 548
           V  Q LPVRF +  AGLVG+DG T  G+FDI FM  LP M++MA +DE EL  M++T  +
Sbjct: 406 VAIQSLPVRFAMDRAGLVGADGATHAGSFDIGFMGALPGMVLMAAADEAELAGMISTSLA 465

Query: 549 IDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARAL 608
           IDDRP  FRYPRG  V  ++P     P EIG+G+++ EG  VA+L  G  +Q  LKA  L
Sbjct: 466 IDDRPSAFRYPRGDGVGVEIPEL-AAPFEIGRGRIVREGTSVAILSLGTRLQESLKAADL 524

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLD 668
           L+  G+  TVADARF KPLD  L+  L + H  LITVEEG++GGFG+ V   +A  G LD
Sbjct: 525 LAARGVSATVADARFAKPLDADLILRLAREHEALITVEEGAMGGFGAFVLQLLAEKGALD 584

Query: 669 SGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
            G+K R + LPD + +  +P    ALAGL   HIAA AL  LG
Sbjct: 585 RGLKVRTLNLPDVFQDQDAPAAMYALAGLNADHIAAAALRALG 627


>gi|83945404|ref|ZP_00957752.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oceanicaulis sp. HTCC2633]
 gi|83851238|gb|EAP89095.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oceanicaulis alexandrii
           HTCC2633]
          Length = 635

 Score =  569 bits (1466), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 303/641 (47%), Positives = 405/641 (63%), Gaps = 25/641 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP LD + +P  LK+  +  LK +A E+R+E    VS T   L + L  VE+TVALHHVF
Sbjct: 4   TPHLDQISSPQDLKNRDLSFLKAVAEELRAETIDAVSVTGGHLGAGLGVVEMTVALHHVF 63

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D ++WDVG Q Y HKILTGRR  I TLR+  G+SG+T RSES+YDPF A H   S+
Sbjct: 64  DTPSDILIWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTKRSESDYDPFGAAHASTSI 123

Query: 199 SAGLGMAVARDIKGKR-ECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLH 257
           SAGLG AV RD+K +    +V VI +G+  AG AYEAM+NAG +  ++IVILND+  S+ 
Sbjct: 124 SAGLGFAVGRDLKHEEGRKVVAVIGDGSMSAGMAYEAMNNAGDMKKDLIVILNDNDMSIA 183

Query: 258 PKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMI 317
           P         + A+S   +R  SSKS+  +R++ +G+ + +G  + E A + +EY RGM 
Sbjct: 184 P--------PVGAMSHYFARQVSSKSYNSIRKLGRGVAEALG--VKEHARRAEEYLRGM- 232

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQK 377
              G TLFEE+G  Y+GP+DGH+++ L++VL+ V   G  GP+L+H VT++ +       
Sbjct: 233 -AMGGTLFEEMGFRYVGPIDGHDMDQLVAVLRNVRDAGE-GPILIHAVTQKGK---GYAP 287

Query: 378 SEAIEKQQEGASDSNSLPFGNYSRT------YDDCFIEALVMEAEKDKDIVVVHAGMEMD 431
           +EA + +  G +  N +  G   ++      Y   F  AL+  AE D+ I  V A M   
Sbjct: 288 AEAADDKYHGVAKFNVVT-GEQQKSKPAAPSYTGVFANALIQLAETDEKICAVTAAMPGG 346

Query: 432 LSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQ 491
             +  F   +P+R FDVG+AEQHAVTF+AGLA  GLKP+  I S FLQR YDQVV+DV  
Sbjct: 347 TGVDKFAAAYPDRAFDVGIAEQHAVTFAAGLAAEGLKPYAAIYSTFLQRGYDQVVHDVAI 406

Query: 492 QRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDD 551
           Q LPVRF I  AGLVG+DG T  GAFD+ +M  LP M++MA +DE EL  MVAT   IDD
Sbjct: 407 QSLPVRFAIDRAGLVGADGATHAGAFDVGYMGALPGMVLMAAADEAELARMVATANEIDD 466

Query: 552 RPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSK 611
           RP  FRYPRG  +  ++P    IP+EIGKG+++ EG  VA+L +GA +   LK+   L+ 
Sbjct: 467 RPSAFRYPRGEGLGVEIP-KELIPLEIGKGRIVREGSGVAILSFGARLGEVLKSADELAA 525

Query: 612 LGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGV 671
            G++ TVADARF KPLD  L+R L + H  LIT+EEG++GGFG+ V HF+A DG LD+GV
Sbjct: 526 YGLNPTVADARFAKPLDHDLIRTLVREHEVLITIEEGAVGGFGAFVLHFLAEDGALDAGV 585

Query: 672 KWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
           K R + LPD + +  SP      AGL   HI A  L  LGR
Sbjct: 586 KIRTMTLPDIFQDQDSPYGMYETAGLNAKHITAKVLDALGR 626


>gi|418404560|ref|ZP_12978014.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sinorhizobium meliloti
           CCNWSX0020]
 gi|359501479|gb|EHK74087.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sinorhizobium meliloti
           CCNWSX0020]
          Length = 658

 Score =  569 bits (1466), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 297/639 (46%), Positives = 407/639 (63%), Gaps = 20/639 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD VE P  LK +  ++L QLA E+R+E+   VS+T   L + L  VELT+A+H +F
Sbjct: 25  TPLLDKVEYPDDLKKIDDRDLPQLAAELRAEMVDAVSRTGGHLGAGLGVVELTIAIHKIF 84

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D++++DVG Q Y HKILTGRR  I TLR++DG+SG+T R+ESEYDPF A H   S+
Sbjct: 85  DTPHDRLIFDVGHQCYPHKILTGRRDRIRTLRQEDGLSGFTRRAESEYDPFGAAHSSTSI 144

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVA ++ GK   ++ VI +G   AG A+EA++NAG LD+ +IVILND+  S+ P
Sbjct: 145 SAGLGMAVAAELDGKSRNVIAVIGDGAMSAGMAFEALNNAGALDARLIVILNDNDMSIAP 204

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S+ L+R+ S +++  +REV K +T  +G+ +     +  E+ARG + 
Sbjct: 205 --------PTGAMSAYLARLASGRTYMGIREVGKKLTAYLGKTVDRAITRAVEHARGYV- 255

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G TLFEE+G Y+IGP+DGH+ + L+ VL+ V    + GPVL+HVVT++ +       +
Sbjct: 256 -TGGTLFEEMGFYHIGPIDGHSFDHLLPVLRNVRD-NAKGPVLIHVVTQKGK---GYPPA 310

Query: 379 EAIEKQQEGASDSNSLPFGNY-----SRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
           EA   +  G +  + +          +  Y   F +AL  EA  D  IV + A M     
Sbjct: 311 EAAADKYHGVNKFDVITGAQAKAKPNAPAYTSVFADALTQEASLDDKIVAITAAMPSGTG 370

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L  F    P R FDVG+AEQHAVTF+AGLA  G KPF  + S FLQRAYDQVV+DV  Q 
Sbjct: 371 LDRFASVHPSRCFDVGIAEQHAVTFAAGLAAEGYKPFAALYSTFLQRAYDQVVHDVAIQG 430

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPVRF I  AG VG+DGPT  G+FD T+++ LP  +VMA +DE EL  MV T A+ D+ P
Sbjct: 431 LPVRFPIDRAGFVGADGPTHAGSFDTTYLATLPGFVVMAAADEAELKHMVRTAAAYDEGP 490

Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
           + FRYPRG  V  +LP  RG  + IGKG+++ +G  VALL +G  + +CL A   L   G
Sbjct: 491 ISFRYPRGEGVGVELP-ERGEILAIGKGRIVKQGNKVALLSFGTRLADCLLAAEDLDAAG 549

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKW 673
           +  TVADARF KPLD  L+R+L ++H  LIT+EEG++GGF SHV  F+A +GL+D G+K 
Sbjct: 550 LSTTVADARFAKPLDHDLIRQLARHHEVLITIEEGAVGGFASHVLQFLAEEGLIDGGLKV 609

Query: 674 RPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
           RP+V+PD ++E A P    A AGL    I +T    LG+
Sbjct: 610 RPMVMPDIWMEQAKPEAMYARAGLDRAGIVSTVFKALGQ 648


>gi|402490059|ref|ZP_10836850.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium sp. CCGE 510]
 gi|401811003|gb|EJT03374.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium sp. CCGE 510]
          Length = 638

 Score =  569 bits (1466), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 301/640 (47%), Positives = 410/640 (64%), Gaps = 22/640 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V  P  L+ L  +EL QLA E+R E+   VS+T   L + L  VELT+A+H+VF
Sbjct: 7   TPLLDQVIYPADLRKLEDRELPQLAREVRDEMIDAVSRTGGHLGAGLGVVELTIAIHNVF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D++++DVG Q Y HKILTGRR  I TLR++DG+SG+T R+ESEYDPF A H   S+
Sbjct: 67  NTPDDRLIFDVGHQCYPHKILTGRRDRIRTLRQEDGLSGFTRRAESEYDPFGAAHSSTSI 126

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMA+A D+      +V VI +G   AG AYEA++NAG LD+ +IVILND+  S+ P
Sbjct: 127 SAGLGMAIAADLDKSDRRVVAVIGDGAMSAGMAYEALNNAGALDARLIVILNDNDMSIAP 186

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S+ L+R+ S +++   R++ K +T  +G+ +     +  E+ARG + 
Sbjct: 187 --------PTGAMSAYLARLASGRTYMGFRDLGKKLTAYLGKNIDRAITRAVEHARGYV- 237

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G T+FEE+G Y+IGP+DGH+ + L+ VL+ V   G  GPVL+HVVT++ +       +
Sbjct: 238 -TGGTMFEEMGFYHIGPIDGHSFDHLLPVLRNVRDNGR-GPVLIHVVTQKGK---GYPPA 292

Query: 379 EAIEKQQEGASDSNSLPFGNYSR------TYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
           EA   +  G +  + +  G  +R      +Y   F EALV EA  D  IV + A M    
Sbjct: 293 EAAADKYHGVNKFDVIT-GAQARVKPNAPSYTSVFAEALVQEATLDDKIVGITAAMPNGT 351

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            L    + FP R FDVG+AEQHAVTF+AGLA  G KPF  + S FLQRAYDQVV+DV  Q
Sbjct: 352 GLDKLADAFPSRCFDVGIAEQHAVTFAAGLAAEGYKPFAALYSTFLQRAYDQVVHDVAIQ 411

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
            LPVRF I  AG VG+DGPT  G+FD  F++ LP  +VMA +DE EL  MV T  + D  
Sbjct: 412 GLPVRFPIDRAGFVGADGPTHAGSFDTAFLTTLPGFVVMAAADEAELKHMVRTAVAYDAG 471

Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
           P+ FRYPRG  V  D+P  RG  ++IGKG+++ EG  VALL +G+ + +CL A   L   
Sbjct: 472 PISFRYPRGEGVGVDMPA-RGEILQIGKGRIIKEGTKVALLSFGSRLADCLLAAEDLDAA 530

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 672
           G+  TVADARF KPLD +L+R+L ++H  +ITVEEGSIGGFGS V  +++ +GLLD+G+K
Sbjct: 531 GLSTTVADARFAKPLDHELIRQLARHHEMVITVEEGSIGGFGSQVMQYLSSEGLLDNGLK 590

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
            R +V+PD ++E A P   +A AGL    I +T    LGR
Sbjct: 591 IRSLVMPDIWMEQAKPEAMIAHAGLDRAGIISTVFKALGR 630


>gi|384261859|ref|YP_005417045.1| 1-deoxy-D-xylulose-5-phosphate synthase 2 [Rhodospirillum
           photometricum DSM 122]
 gi|378402959|emb|CCG08075.1| 1-deoxy-D-xylulose-5-phosphate synthase 2 [Rhodospirillum
           photometricum DSM 122]
          Length = 640

 Score =  568 bits (1465), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 300/639 (46%), Positives = 407/639 (63%), Gaps = 18/639 (2%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD + +P  ++ LT  +L+QLA E+R+E+  IVS T   L + L  VELTVALHHVF
Sbjct: 7   TPLLDTLRDPADIRRLTTAQLEQLAHEVRAEMIDIVSHTGGHLSAGLGVVELTVALHHVF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+++WDVG Q+Y HKI+TGRR  + +LR+  GISG+T R ES YDPF AGH   S+
Sbjct: 67  NTPEDRLIWDVGHQSYPHKIVTGRRERMRSLRQGGGISGFTLREESPYDPFGAGHSSTSI 126

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMA A ++ G    ++ VI +G+  AG AYEAM+NAG + S +IVILND+  S+ P
Sbjct: 127 SAGLGMAAAAELLGDDRLVIAVIGDGSMSAGMAYEAMNNAGAMKSRLIVILNDNDMSIAP 186

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                    + A+S+ LSR+ SS S+  +R++AK +   +   +   A + +EYAR ++ 
Sbjct: 187 P--------VGAMSAYLSRLLSSNSWLSIRDLAKEVASHLPPPLERTARRAEEYARSIM- 237

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G+TLFEELG YY+GP+DGH ++ L+ VL+ V      GPVL+HVVT   R+ +    +
Sbjct: 238 TGGNTLFEELGFYYVGPIDGHRMDHLVPVLRNVRDGRRDGPVLIHVVT---RKGKGYAPA 294

Query: 379 EAIEKQQEGASDSNSL-----PFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
           EA   +  G S  N +          + +Y + F ++L+ EA +D  IV + A M     
Sbjct: 295 EAAPDKYHGVSRFNIVTGVQDKGKPQAPSYTNVFGKSLLTEAIRDPRIVAITAAMPSGTG 354

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L  F E FP+R +DVG+AEQHAVTF+AGLAC GL+PF  + S FLQRA+DQVV+DV  Q 
Sbjct: 355 LDKFAETFPDRTYDVGIAEQHAVTFAAGLACEGLRPFVAMYSTFLQRAFDQVVHDVALQN 414

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPVR  +  AG VG+DG T  G FD+ F+ C+PN+++M  +DE EL  MVAT A  DD P
Sbjct: 415 LPVRIAVDRAGFVGADGATHGGVFDMAFLGCIPNLVIMCAADEAELARMVATAALYDDGP 474

Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
              RYPRG  V  ++P     P+ IGKG+V+ EGK VALL  G  + +CL A   L+  G
Sbjct: 475 TVLRYPRGEGVGVEIPDAPE-PLAIGKGRVVREGKGVALLSIGTRLHDCLAAAEQLAARG 533

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKW 673
           +  TVADARF KPLD  L+  L + H  L+ VEEGSIGGFGS V   +A  GLLD+G+K 
Sbjct: 534 LSPTVADARFAKPLDWDLIEGLARTHEVLVLVEEGSIGGFGSLVVTGLANRGLLDNGLKT 593

Query: 674 RPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
           R + +PD + EH +P  Q A AG+    I  T L+ LGR
Sbjct: 594 RILCIPDRFFEHDTPEAQCAKAGIDASAILDTVLAALGR 632


>gi|255262871|ref|ZP_05342213.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thalassiobium sp. R2A62]
 gi|255105206|gb|EET47880.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thalassiobium sp. R2A62]
          Length = 642

 Score =  568 bits (1465), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 304/645 (47%), Positives = 402/645 (62%), Gaps = 22/645 (3%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           D+  TP LD V  P  +KS++  EL +LA E+R E  S VS T   L + L  VELTVAL
Sbjct: 3   DRPHTPTLDRVVTPTDMKSMSAAELCRLADEVRQETISAVSVTGGHLGAGLGVVELTVAL 62

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H VF  P D+I+WDV  Q Y HKILTGRR  I TLR++DG+SG+T RSES YDPF A H 
Sbjct: 63  HAVFDTPKDRIIWDVSHQCYPHKILTGRRDRIRTLRQRDGLSGFTKRSESPYDPFGAAHS 122

Query: 195 CNSVSAGLGMAVARDIKGKREC----IVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
             S+SA LG AVARD+ G  E      + VI +G+  AG AYEAM+NAG+L   MIVILN
Sbjct: 123 STSISAALGFAVARDLGGAPEHGLGDAIAVIGDGSMSAGMAYEAMNNAGHLKKRMIVILN 182

Query: 251 DSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVD 310
           D+  S+ P         + A+SS LSR+ +   F++L+  AKG    +       A +  
Sbjct: 183 DNEMSIAP--------PVGAMSSYLSRLYAGAPFQELKAAAKGAVSLLPEPFQLGAKRAK 234

Query: 311 EYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR 370
           E  +GM    G TLFEELG  Y+GP+DGH++E L+ VL+ V    + GP+L+H +T++ +
Sbjct: 235 EMLKGMT--VGGTLFEELGFSYLGPIDGHDMEQLLGVLRTVKDRAT-GPILIHAITKKGK 291

Query: 371 ----RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHA 426
                   + K   + K      +    P  + + +Y   F +AL+  A KD  I  V A
Sbjct: 292 GYAPAEAASDKGHGVSKFDMVTGEQKKAP--SNAPSYTSVFSKALLDLAAKDDKICAVTA 349

Query: 427 GMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVV 486
            M     L+ F +++  R FDVG+AEQHAVTFSAGLA GG++PFC + S FLQR YDQVV
Sbjct: 350 AMPDGTGLKQFMDRYASRCFDVGIAEQHAVTFSAGLAAGGMRPFCALYSTFLQRGYDQVV 409

Query: 487 NDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATV 546
           +DV  QRLPVRF I  AGLVG+DG T  GAFD+ F+S LP  +VMA +DE EL  MV T 
Sbjct: 410 HDVAIQRLPVRFAIDRAGLVGADGATHAGAFDVGFLSNLPGFVVMAAADEAELTRMVVTA 469

Query: 547 ASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
           A  D+ P+ FR+PRG  V  ++P     PIEIGKG+++ EGK VA+L +G  +Q    A 
Sbjct: 470 AQHDEGPIAFRFPRGEGVGVEIP-EDAKPIEIGKGRMIREGKGVAILSFGTRLQEVEAAC 528

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGL 666
             L+  GI  T+ADARF KPLD +++ +L  +H  LITVEEG+IGGFGSHV+  +A +G+
Sbjct: 529 EALAARGITPTIADARFAKPLDREMILKLAADHEALITVEEGAIGGFGSHVAQLLADEGV 588

Query: 667 LDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
            D G+K+R +VLPD +I+ A P    ++AGL   HI A  L +LG
Sbjct: 589 FDHGLKYRSMVLPDTFIDQAGPRDMYSVAGLNSEHIEAKVLDVLG 633


>gi|146278825|ref|YP_001168984.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacter sphaeroides
           ATCC 17025]
 gi|145557066|gb|ABP71679.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Rhodobacter sphaeroides
           ATCC 17025]
          Length = 637

 Score =  568 bits (1464), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 303/643 (47%), Positives = 405/643 (62%), Gaps = 22/643 (3%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           D+  TP LD V  P+ +K LT +EL+ LA E+R+E  S VS T   L + L  VELTVAL
Sbjct: 3   DRPCTPTLDRVTLPVDMKGLTDRELRNLADELRAETISAVSVTGGHLGAGLGVVELTVAL 62

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H VF AP DKI+WDVG Q Y HKILTGRR  I TLR+  G+SG+T RSES YD F AGH 
Sbjct: 63  HAVFDAPRDKIIWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTKRSESPYDCFGAGHS 122

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA +G A AR++ G     V +I +G+  AG A+EA+++ G+L + +IVILND+  
Sbjct: 123 STSISAAVGFAAARELGGDTGDAVAIIGDGSMSAGMAFEALNHGGHLKNRVIVILNDNEM 182

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+ P +         ALSS LSR+ +   F+  +  AKG    +     E A +  E  +
Sbjct: 183 SIAPPV--------GALSSYLSRLYAGAPFQDFKAAAKGALGLLPEPFQEGARRAKEMLK 234

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAED 374
            +    G TLFEELG  Y+GP+DGH+++ L+ VL+ V    S  PVL+HV+T   ++ + 
Sbjct: 235 SVT--VGGTLFEELGFSYVGPIDGHDLDQLLPVLRTVKQRAS-APVLIHVIT---KKGKG 288

Query: 375 TQKSEAIEKQQEGASDSNSL------PFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGM 428
              +EA   +    +  N L      P  N + +Y   F ++L+ EAE D+ I  V A M
Sbjct: 289 YAPAEAARDRGHATNKFNVLTGAQVKPVSN-APSYTKVFAQSLIKEAEVDERICAVTAAM 347

Query: 429 EMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVND 488
                L LF ++FP+R FDVG+AEQHAVTFSAGLA GG++PFC I S FLQR YDQ+V+D
Sbjct: 348 PDGTGLNLFADRFPKRIFDVGIAEQHAVTFSAGLAAGGMRPFCAIYSTFLQRGYDQIVHD 407

Query: 489 VDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVAS 548
           V  QRLPVRF I  AGLVG+DG T  G+FD+ F+S LP ++VMA +DE ELV MVAT A+
Sbjct: 408 VAIQRLPVRFAIDRAGLVGADGATHAGSFDVAFLSNLPGIVVMAAADEAELVHMVATAAA 467

Query: 549 IDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARAL 608
            D+ P+ FRYPRG  V  ++P  +G+P++IG+G+V+ EG  +ALL +G  +     A   
Sbjct: 468 HDEGPIAFRYPRGDGVGVEMPA-KGVPLQIGRGRVVSEGTRIALLSFGTRLSEVQVAAEA 526

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLD 668
           L+  GI  TVADARF KPLD  L+ +L  +H  LIT+EEG+IGGFGSHV+  +A  G+ D
Sbjct: 527 LAARGISPTVADARFAKPLDRDLILQLAAHHEALITIEEGAIGGFGSHVAQLLAEAGVFD 586

Query: 669 SGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
            G ++R +VLPD +I+H S     A AGL    I   AL  LG
Sbjct: 587 RGFRYRSMVLPDTFIDHNSAEAMYATAGLNAADIERKALETLG 629


>gi|407719744|ref|YP_006839406.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sinorhizobium meliloti
           Rm41]
 gi|407317976|emb|CCM66580.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sinorhizobium meliloti
           Rm41]
          Length = 645

 Score =  568 bits (1464), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 296/639 (46%), Positives = 407/639 (63%), Gaps = 20/639 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V+ P  LK +  ++L QLA E+R+E+   VS+T   L + L  VELT+A+H +F
Sbjct: 12  TPLLDKVDYPDDLKKMDDRDLPQLAAELRAEMVDAVSRTGGHLGAGLGVVELTIAIHKIF 71

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D++++DVG Q Y HKILTGRR  I TLR++DG+SG+T R+ESEYDPF A H   S+
Sbjct: 72  DTPHDRLIFDVGHQCYPHKILTGRRDRIRTLRQEDGLSGFTRRAESEYDPFGAAHSSTSI 131

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVA ++ GK   ++ VI +G   AG A+EA++NAG LD+ +IVILND+  S+ P
Sbjct: 132 SAGLGMAVAAELDGKSRNVIAVIGDGAMSAGMAFEALNNAGALDARLIVILNDNDMSIAP 191

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S+ L+R+ S +++  +REV K +T  +G+ +     +  E+ARG + 
Sbjct: 192 --------PTGAMSAYLARLASGRTYMGIREVGKKLTAYLGKTVDRAITRAVEHARGYV- 242

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G TLFEE+G Y+IGP+DGH+ + L+ VL+ V    + GPVL+HVVT++ +       +
Sbjct: 243 -TGGTLFEEMGFYHIGPIDGHSFDHLLPVLRNVRD-NAKGPVLIHVVTQKGK---GYPPA 297

Query: 379 EAIEKQQEGASDSNSLPFGNY-----SRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
           EA   +  G +  + +          +  Y   F +AL  EA  D  IV + A M     
Sbjct: 298 EAAADKYHGVNKFDVITGAQAKAKPNAPAYTSVFADALTQEASLDDKIVAITAAMPSGTG 357

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L  F    P R FDVG+AEQHAVTF+AGLA  G KPF  + S FLQRAYDQVV+DV  Q 
Sbjct: 358 LDKFASVHPSRCFDVGIAEQHAVTFAAGLAAEGYKPFAALYSTFLQRAYDQVVHDVAIQG 417

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPVRF I  AG VG+DGPT  G+FD T+++ LP  +VMA +DE EL  MV T A+ D+ P
Sbjct: 418 LPVRFPIDRAGFVGADGPTHAGSFDTTYLATLPGFVVMAAADEAELKHMVRTAAAYDEGP 477

Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
           + FRYPRG  V  +LP  RG  + IGKG+++ +G  VALL +G  + +CL A   L   G
Sbjct: 478 ISFRYPRGEGVGVELP-ERGEILAIGKGRIVKQGNKVALLSFGTRLADCLLAAEDLDAAG 536

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKW 673
           +  TVADARF KPLD  L+R+L ++H  LIT+EEG++GGF SHV  F+A +GL+D G+K 
Sbjct: 537 LSTTVADARFAKPLDHDLIRQLARHHEVLITIEEGAVGGFASHVLQFLAEEGLIDGGLKV 596

Query: 674 RPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
           RP+V+PD ++E A P    A AGL    I +T    LG+
Sbjct: 597 RPMVMPDIWMEQAKPEAMYARAGLDRAGIVSTVFKALGQ 635


>gi|15964633|ref|NP_384986.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sinorhizobium meliloti
           1021]
 gi|334315344|ref|YP_004547963.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sinorhizobium meliloti
           AK83]
 gi|384528590|ref|YP_005712678.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sinorhizobium meliloti
           BL225C]
 gi|21263533|sp|Q92RJ1.1|DXS_RHIME RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|15073811|emb|CAC45452.1| Probable 1-deoxyxylulose-5-phosphate synthase [Sinorhizobium
           meliloti 1021]
 gi|333810766|gb|AEG03435.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sinorhizobium meliloti
           BL225C]
 gi|334094338|gb|AEG52349.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sinorhizobium meliloti
           AK83]
          Length = 645

 Score =  568 bits (1464), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 296/639 (46%), Positives = 407/639 (63%), Gaps = 20/639 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V+ P  LK +  ++L QLA E+R+E+   VS+T   L + L  VELT+A+H +F
Sbjct: 12  TPLLDKVDYPDDLKKIDDRDLPQLAAELRAEMVDAVSRTGGHLGAGLGVVELTIAIHKIF 71

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D++++DVG Q Y HKILTGRR  I TLR++DG+SG+T R+ESEYDPF A H   S+
Sbjct: 72  DTPHDRLIFDVGHQCYPHKILTGRRDRIRTLRQEDGLSGFTRRAESEYDPFGAAHSSTSI 131

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVA ++ GK   ++ VI +G   AG A+EA++NAG LD+ +IVILND+  S+ P
Sbjct: 132 SAGLGMAVAAELDGKSRNVIAVIGDGAMSAGMAFEALNNAGALDARLIVILNDNDMSIAP 191

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S+ L+R+ S +++  +REV K +T  +G+ +     +  E+ARG + 
Sbjct: 192 --------PTGAMSAYLARLASGRTYMGIREVGKKLTAYLGKTVDRAITRAVEHARGYV- 242

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G TLFEE+G Y+IGP+DGH+ + L+ VL+ V    + GPVL+HVVT++ +       +
Sbjct: 243 -TGGTLFEEMGFYHIGPIDGHSFDHLLPVLRNVRD-NAKGPVLIHVVTQKGK---GYPPA 297

Query: 379 EAIEKQQEGASDSNSLPFGNY-----SRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
           EA   +  G +  + +          +  Y   F +AL  EA  D  IV + A M     
Sbjct: 298 EAAADKYHGVNKFDVITGAQAKAKPNAPAYTSVFADALTQEASLDDKIVAITAAMPSGTG 357

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L  F    P R FDVG+AEQHAVTF+AGLA  G KPF  + S FLQRAYDQVV+DV  Q 
Sbjct: 358 LDKFASVHPSRCFDVGIAEQHAVTFAAGLAAEGYKPFAALYSTFLQRAYDQVVHDVAIQG 417

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPVRF I  AG VG+DGPT  G+FD T+++ LP  +VMA +DE EL  MV T A+ D+ P
Sbjct: 418 LPVRFPIDRAGFVGADGPTHAGSFDTTYLATLPGFVVMAAADEAELKHMVRTAAAYDEGP 477

Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
           + FRYPRG  V  +LP  RG  + IGKG+++ +G  VALL +G  + +CL A   L   G
Sbjct: 478 ISFRYPRGEGVGVELP-ERGEILAIGKGRIVKQGNKVALLSFGTRLADCLLAAEDLDAAG 536

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKW 673
           +  TVADARF KPLD  L+R+L ++H  LIT+EEG++GGF SHV  F+A +GL+D G+K 
Sbjct: 537 LSTTVADARFAKPLDHDLIRQLARHHEVLITIEEGAVGGFASHVLQFLAEEGLIDGGLKV 596

Query: 674 RPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
           RP+V+PD ++E A P    A AGL    I +T    LG+
Sbjct: 597 RPMVMPDIWMEQAKPEAMYARAGLDRAGIVSTVFKALGQ 635


>gi|357032439|ref|ZP_09094377.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconobacter morbifer
           G707]
 gi|356413976|gb|EHH67625.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconobacter morbifer
           G707]
          Length = 660

 Score =  568 bits (1463), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 307/652 (47%), Positives = 408/652 (62%), Gaps = 34/652 (5%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P LD V  P  +++L++ +LKQLA E+RSE    VS T   L +SL  VELTVALH VF+
Sbjct: 15  PELDRVRLPSDMRNLSVDQLKQLAEELRSETVDAVSTTGGHLGASLGVVELTVALHAVFN 74

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+I+WDVG Q Y HKILTGRR  I TLR+ +G+SG+T R ESEYDPF A H   S+S
Sbjct: 75  TPDDRIIWDVGHQAYPHKILTGRRDRIRTLRQPNGLSGFTRRVESEYDPFGAAHSSTSIS 134

Query: 200 AGLGMAVARDIKGKRE------CIVTVISNGTTMAGQAYEAMSNA---GYLDSNMIVILN 250
           AGLGMAVA  ++ + +       ++ VI +G+  AG AYEAM+NA   G   + +IV+LN
Sbjct: 135 AGLGMAVAHHLRAEEDPSYHERNVIAVIGDGSISAGMAYEAMNNAAVAGPGANRLIVVLN 194

Query: 251 DSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVD 310
           D+  S+ P +         ++S  LSR+ SS+ F  LR++A  + KR+   +   A + +
Sbjct: 195 DNEMSIAPPV--------GSMSDYLSRLMSSRQFFSLRDLAGKVAKRLPGKIERTAKRAE 246

Query: 311 EYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR 370
           EYARGMI   G TLFEELG YY+GPV+GH++  L+ +L+ +      GP+L+HV+TE+ R
Sbjct: 247 EYARGMI--TGGTLFEELGFYYVGPVNGHDMSQLVPILRNLRDADDQGPILLHVITEKGR 304

Query: 371 RAEDTQ----KSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHA 426
             +  +    K  A+ K      +    P G  S  Y   F   L+  AE D  ++ + A
Sbjct: 305 GYKPAEAAGDKYHAVSKFNVVTGEQKKAPAGPPS--YTSVFSRELMRRAETDDKLITITA 362

Query: 427 GMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVV 486
            M     L  F +  P+R+FDVG+AEQHAVTF+AG+A  GL+PFC I S FLQRAYDQVV
Sbjct: 363 AMPSGTGLGAFAKAHPDRFFDVGIAEQHAVTFAAGIASEGLRPFCAIYSTFLQRAYDQVV 422

Query: 487 NDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATV 546
           +DV  Q LPVRF I  AGLVG+DG T  G+FD+ ++ CLPNM+VMAPSDE EL+   AT 
Sbjct: 423 HDVALQNLPVRFAIDRAGLVGADGATHAGSFDLNYLCCLPNMVVMAPSDEVELLHATATA 482

Query: 547 ASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKD-------VALLGYGAMV 599
              D  P+ FRYPRG+ +  DLP  +G  +EIGKG+++ E +        VA+L  G  +
Sbjct: 483 CEHDSGPIAFRYPRGSGIGLDLP-EKGEVLEIGKGRIVREARQAPGERGGVAILSLGPRL 541

Query: 600 QNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSH 659
              LKA   L+  GI VTVADARF KP+D KLV +L + H   IT+EEG+ GGF S V  
Sbjct: 542 HESLKAADQLAAQGIPVTVADARFAKPIDHKLVDDLARKHEVFITLEEGAAGGFSSQVVS 601

Query: 660 FIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
            +A +GLLD+ VK+RP+  PD YI+H +   Q   AGLT  HI  TA S LG
Sbjct: 602 HLAKNGLLDT-VKFRPMAFPDRYIDHNTQDAQYDEAGLTAPHIVHTAASALG 652


>gi|126727248|ref|ZP_01743084.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacterales bacterium
           HTCC2150]
 gi|126703457|gb|EBA02554.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacterales bacterium
           HTCC2150]
          Length = 646

 Score =  568 bits (1463), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 304/645 (47%), Positives = 406/645 (62%), Gaps = 26/645 (4%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP LD V  P  +K L+  EL+ LA E+R+E  S VS+T   L + L  VELTVALH +F
Sbjct: 11  TPTLDRVNVPADMKGLSDPELRTLADELRAETISAVSQTGGHLGAGLGVVELTVALHAIF 70

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDV  Q Y HKILTGRR  I TLR++ G+SG+T RSES +DPF A H   S+
Sbjct: 71  DTPKDRLIWDVSHQCYPHKILTGRRDRIRTLRQQGGLSGFTKRSESPFDPFGAAHSSTSI 130

Query: 199 SAGLGMAVARDIKGKREC----IVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
           SA LG A ARD+ G  E      + VI +G   AGQAYEAM+NAG+L   + VILND+  
Sbjct: 131 SAALGFATARDLGGAPEHGIGDAIAVIGDGAMSAGQAYEAMNNAGHLGKRLFVILNDNEM 190

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+ P         + A+SS LSR+ +   F++L+  AKG    +     E A +  E  +
Sbjct: 191 SIAP--------PVGAMSSYLSRLYAGDPFQELKAAAKGAVSLLPEPFQEGARRAKEMLK 242

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAED 374
           GM    G TLFEELG  Y+GP+DGH+++ L+ VL+ V +  + GP+L+HV+T++ +    
Sbjct: 243 GMT--VGGTLFEELGFSYLGPIDGHDLDQLLPVLRTVKTRAT-GPILIHVITQKGK---G 296

Query: 375 TQKSEAIEKQQEGASDSNSLPFGNYSRT------YDDCFIEALVMEAEKDKDIVVVHAGM 428
              +EA   +  G S  + +  G   +T      Y   F +AL+ EA +D  I  + A M
Sbjct: 297 YAPAEAARDKGHGVSKFDVVT-GKQKKTPSNAPSYTGVFAKALMDEASRDDKITAITAAM 355

Query: 429 EMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVND 488
                L LF EKFP+R FDVG+AEQHAVTF+A  A GG+KPFC + S FLQR YDQVV+D
Sbjct: 356 PDGTGLNLFAEKFPKRCFDVGIAEQHAVTFAAAQAAGGMKPFCALYSTFLQRGYDQVVHD 415

Query: 489 VDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVAS 548
           V  QRLPVRF I  AGLVG+DG T  GAFDI F++ LP+ +VMA +DE ELV MVAT  +
Sbjct: 416 VAIQRLPVRFAIDRAGLVGADGATHAGAFDIGFLANLPDFVVMAAADEAELVHMVATATA 475

Query: 549 IDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARAL 608
            DD P+ FR+PRG  V   LP  RG PIEIGKG+++ +G  VA+L +G  +    KA   
Sbjct: 476 YDDGPIAFRFPRGEGVGVTLP-ERGEPIEIGKGRMIAKGARVAILSFGTRLSEVQKAVEA 534

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLD 668
           LS  GI  T+ADARF KPLD +++ +L  NH  LIT+EEG +GGFGSHV+  +A +G+ D
Sbjct: 535 LSARGISPTIADARFAKPLDREMILDLAANHEALITIEEGVVGGFGSHVAQLLADEGVFD 594

Query: 669 SGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRT 713
           +G+++R +VLPD +I+HA+P      A +    I A  L +LG T
Sbjct: 595 NGLRFRSMVLPDTFIDHANPKDMYDDAKMNAADIEAKVLDVLGVT 639


>gi|433612645|ref|YP_007189443.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sinorhizobium meliloti
           GR4]
 gi|429550835|gb|AGA05844.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sinorhizobium meliloti
           GR4]
          Length = 645

 Score =  568 bits (1463), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 296/639 (46%), Positives = 407/639 (63%), Gaps = 20/639 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V+ P  LK +  ++L QLA E+R+E+   VS+T   L + L  VELT+A+H +F
Sbjct: 12  TPLLDKVDYPDDLKKIDDRDLPQLAAELRAEMVDAVSRTGGHLGAGLGVVELTIAIHKIF 71

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D++++DVG Q Y HKILTGRR  I TLR++DG+SG+T R+ESEYDPF A H   S+
Sbjct: 72  DTPHDRLIFDVGHQCYPHKILTGRRDRIRTLRQEDGLSGFTRRAESEYDPFGAAHSSTSI 131

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVA ++ GK   ++ VI +G   AG A+EA++NAG LD+ +IVILND+  S+ P
Sbjct: 132 SAGLGMAVAAELDGKSRNVIAVIGDGAMSAGMAFEALNNAGALDARLIVILNDNDMSIAP 191

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S+ L+R+ S +++  +REV K +T  +G+ +     +  E+ARG + 
Sbjct: 192 --------PTGAMSAYLARLASGRTYMGIREVGKKLTAYLGKTVDRAITRAVEHARGYV- 242

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G TLFEE+G Y+IGP+DGH+ + L+ VL+ V    + GPVL+HVVT++ +       +
Sbjct: 243 -TGGTLFEEMGFYHIGPIDGHSFDHLLPVLRNVRD-NAKGPVLIHVVTQKGK---GYPPA 297

Query: 379 EAIEKQQEGASDSNSLPFGNY-----SRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
           EA   +  G +  + +          +  Y   F +AL  EA  D  IV + A M     
Sbjct: 298 EAAADKYHGVNKFDVITGAQAKAKPNAPAYTTVFADALTQEASLDDKIVAITAAMPSGTG 357

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L  F    P R FDVG+AEQHAVTF+AGLA  G KPF  + S FLQRAYDQVV+DV  Q 
Sbjct: 358 LDKFASVHPSRCFDVGIAEQHAVTFAAGLAAEGYKPFAALYSTFLQRAYDQVVHDVAIQG 417

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPVRF I  AG VG+DGPT  G+FD T+++ LP  +VMA +DE EL  MV T A+ D+ P
Sbjct: 418 LPVRFPIDRAGFVGADGPTHAGSFDTTYLATLPGFVVMAAADEAELKHMVRTAAAYDEGP 477

Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
           + FRYPRG  V  +LP  RG  + IGKG+++ +G  VALL +G  + +CL A   L   G
Sbjct: 478 ISFRYPRGEGVGVELP-ERGEILAIGKGRIVKQGNKVALLSFGTRLADCLLAAEDLDAAG 536

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKW 673
           +  TVADARF KPLD  L+R+L ++H  LIT+EEG++GGF SHV  F+A +GL+D G+K 
Sbjct: 537 LSTTVADARFAKPLDHDLIRQLARHHEVLITIEEGAVGGFASHVLQFLAEEGLIDGGLKV 596

Query: 674 RPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
           RP+V+PD ++E A P    A AGL    I +T    LG+
Sbjct: 597 RPMVMPDIWMEQAKPEAMYARAGLDRAGIVSTVFKALGQ 635


>gi|58038727|ref|YP_190691.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconobacter oxydans
           621H]
 gi|58001141|gb|AAW60035.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Gluconobacter oxydans
           621H]
          Length = 669

 Score =  567 bits (1462), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 304/652 (46%), Positives = 407/652 (62%), Gaps = 34/652 (5%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P LD V  P  +++L++ +LKQLA E+RSE    VS T   L +SL  VELTVALH VF+
Sbjct: 24  PELDRVRFPADMRNLSVDQLKQLADELRSETVDAVSTTGGHLGASLGVVELTVALHAVFN 83

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+I+WDVG Q Y HKILTGRR  I TLR+ +G+SG+T R+ESEYDPF A H   S+S
Sbjct: 84  TPDDRIIWDVGHQAYPHKILTGRRDRIRTLRQPEGLSGFTRRAESEYDPFGAAHSSTSIS 143

Query: 200 AGLGMAVARDIKGKRE------CIVTVISNGTTMAGQAYEAMSNA---GYLDSNMIVILN 250
           AGLGMAVA  ++ + +       ++ VI +G+  AG AYEAM+NA   G   + +IV+LN
Sbjct: 144 AGLGMAVAHHLRAEEDPSYHERNVIAVIGDGSISAGMAYEAMNNAAVAGPGANRLIVVLN 203

Query: 251 DSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVD 310
           D+  S+ P +         ++S  LSR+ SS+ F  LR++A  + KR+   +   A + +
Sbjct: 204 DNEMSIAPPV--------GSMSDYLSRLMSSRQFFSLRDLAGKVAKRLPGKIERTAKRAE 255

Query: 311 EYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR 370
           EYARGMI   G TLFEELG YY+GPV+GH++  L+ +L+ +      GP+L+H++TE+ R
Sbjct: 256 EYARGMI--TGGTLFEELGFYYVGPVNGHDMSQLVPILRNLRDADDQGPILLHIITEKGR 313

Query: 371 RAEDTQ----KSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHA 426
             +  +    K  A+ K      +    P G  S  Y   F   L+  A+ D  ++ + A
Sbjct: 314 GYKPAEAAGDKYHAVSKFNVVTGEQKKAPAGPPS--YTSIFSRELMRRAKTDDKLITITA 371

Query: 427 GMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVV 486
            M     L  F + +P+R+FDVG+AEQHAVTF+AG+A  GL+PFC I S FLQRAYDQVV
Sbjct: 372 AMPSGTGLNAFAKAYPDRFFDVGIAEQHAVTFAAGIASEGLRPFCAIYSTFLQRAYDQVV 431

Query: 487 NDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATV 546
           +DV  Q LPVRF I  AGLVG+DG T  GAFD+ ++ CLPNM+VMAPSDE EL+   AT 
Sbjct: 432 HDVALQNLPVRFAIDRAGLVGADGATHAGAFDLNYLCCLPNMVVMAPSDEVELLHATATA 491

Query: 547 ASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGK-------DVALLGYGAMV 599
              D  P+ FRYPRG  +  DLP  +G  +EIGKG+++ E +        VA+L  G  +
Sbjct: 492 CEYDAGPIAFRYPRGNGIGLDLP-EKGEVLEIGKGRIVREARRAPNARGGVAILSLGPRM 550

Query: 600 QNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSH 659
              L+A   L+  G+ VTVADARF KP+D  LV +L + H   IT+EEG+IGGF S V  
Sbjct: 551 HESLRAADQLAAQGVPVTVADARFAKPIDKALVEDLARQHEVFITIEEGAIGGFSSLVVQ 610

Query: 660 FIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
            +A  GLLD  VK+RP+ LPD YI+H +   Q   AGLT  HI  TA   LG
Sbjct: 611 HLAETGLLDK-VKFRPMALPDRYIDHNTQDAQYEDAGLTAPHIVRTAADALG 661


>gi|429207275|ref|ZP_19198534.1| 1-deoxy-D-xylulose 5-phosphate synthase [Rhodobacter sp. AKP1]
 gi|428189650|gb|EKX58203.1| 1-deoxy-D-xylulose 5-phosphate synthase [Rhodobacter sp. AKP1]
          Length = 637

 Score =  567 bits (1462), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 305/643 (47%), Positives = 404/643 (62%), Gaps = 22/643 (3%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           D+  TP LD V  P+ +K LT +EL+ LA E+R+E  S VS T   L + L  VELTVAL
Sbjct: 3   DRPCTPTLDRVTLPVDMKGLTDRELRSLADELRAETISAVSVTGGHLGAGLGVVELTVAL 62

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H VF AP DKI+WDVG Q Y HKILTGRR  I TLR+  G+SG+T RSES YD F AGH 
Sbjct: 63  HAVFDAPRDKIIWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTKRSESPYDCFGAGHS 122

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA +G A AR++ G     V VI +G+  AG A+EA+++ G+L + +IVILND+  
Sbjct: 123 STSISAAVGFAAAREMGGDTGDAVAVIGDGSMSAGMAFEALNHGGHLKNRVIVILNDNEM 182

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+ P +         ALSS LSR+ +   F+  +  AKG    +     E A +  E  +
Sbjct: 183 SIAPPV--------GALSSYLSRLYAGAPFQDFKAAAKGALGLLPEPFQEGARRAKEMLK 234

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAED 374
            +    G TLFEELG  Y+GP+DGH+++ L+ VL+ V    +  PVL+HV+T++ R    
Sbjct: 235 SVT--VGGTLFEELGFSYVGPIDGHDLDQLLPVLRTVKQR-AHAPVLIHVITKKGR---G 288

Query: 375 TQKSEAIEKQQEGASDSNSL------PFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGM 428
              +EA   +    +  N L      P  N + +Y   F ++L+ EAE D+ I  V A M
Sbjct: 289 YAPAEAARDRGHATNKFNVLTGAQVKPVSN-APSYTKVFAQSLIKEAEVDERICAVTAAM 347

Query: 429 EMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVND 488
                L LF E+FP+R FDVG+AEQHAVTFSA LA GG++PFC I S FLQR YDQ+V+D
Sbjct: 348 PDGTGLNLFGERFPKRTFDVGIAEQHAVTFSAALAAGGMRPFCAIYSTFLQRGYDQIVHD 407

Query: 489 VDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVAS 548
           V  QRLPVRF I  AGLVG+DG T  G+FD+ F+S LP ++VMA +DE ELV MVAT A+
Sbjct: 408 VAIQRLPVRFAIDRAGLVGADGATHAGSFDVAFLSNLPGIVVMAAADEAELVHMVATAAA 467

Query: 549 IDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARAL 608
            D+ P+ FRYPRG  V  ++P  RG+P++IG+G+V+ EG  +ALL +G  +     A   
Sbjct: 468 HDEGPIAFRYPRGDGVGVEMPA-RGVPLQIGRGRVVREGTRIALLSFGTRLAEVQVAAEA 526

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLD 668
           L+  GI  TVADARF KPLD  L+ +L  +H  LIT+EEG+IGGFGSHV+  +A  G+ D
Sbjct: 527 LAARGISPTVADARFAKPLDRDLILQLAAHHEALITIEEGAIGGFGSHVAQLLAEAGIFD 586

Query: 669 SGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
            G ++R +VLPD +I+H S     A AGL    I   AL  LG
Sbjct: 587 RGFRYRSMVLPDTFIDHNSAEVMYATAGLNAADIERKALETLG 629


>gi|384534992|ref|YP_005719077.1| probabable 1-deoxyxylulose-5-phosphate synthase protein
           [Sinorhizobium meliloti SM11]
 gi|336031884|gb|AEH77816.1| probabable 1-deoxyxylulose-5-phosphate synthase protein
           [Sinorhizobium meliloti SM11]
          Length = 658

 Score =  567 bits (1462), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 296/639 (46%), Positives = 407/639 (63%), Gaps = 20/639 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V+ P  LK +  ++L QLA E+R+E+   VS+T   L + L  VELT+A+H +F
Sbjct: 25  TPLLDKVDYPDDLKKIDDRDLPQLAAELRAEMVDAVSRTGGHLGAGLGVVELTIAIHKIF 84

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D++++DVG Q Y HKILTGRR  I TLR++DG+SG+T R+ESEYDPF A H   S+
Sbjct: 85  DTPHDRLIFDVGHQCYPHKILTGRRDRIRTLRQEDGLSGFTRRAESEYDPFGAAHSSTSI 144

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVA ++ GK   ++ VI +G   AG A+EA++NAG LD+ +IVILND+  S+ P
Sbjct: 145 SAGLGMAVAAELDGKSRNVIAVIGDGAMSAGMAFEALNNAGALDARLIVILNDNDMSIAP 204

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S+ L+R+ S +++  +REV K +T  +G+ +     +  E+ARG + 
Sbjct: 205 --------PTGAMSAYLARLASGRTYMGIREVGKKLTAYLGKTVDRAITRAVEHARGYV- 255

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G TLFEE+G Y+IGP+DGH+ + L+ VL+ V    + GPVL+HVVT++ +       +
Sbjct: 256 -TGGTLFEEMGFYHIGPIDGHSFDHLLPVLRNVRD-NAKGPVLIHVVTQKGK---GYPPA 310

Query: 379 EAIEKQQEGASDSNSLPFGNY-----SRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
           EA   +  G +  + +          +  Y   F +AL  EA  D  IV + A M     
Sbjct: 311 EAAADKYHGVNKFDVITGAQAKAKPNAPAYTSVFADALTQEASLDDKIVAITAAMPSGTG 370

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L  F    P R FDVG+AEQHAVTF+AGLA  G KPF  + S FLQRAYDQVV+DV  Q 
Sbjct: 371 LDKFASVHPSRCFDVGIAEQHAVTFAAGLAAEGYKPFAALYSTFLQRAYDQVVHDVAIQG 430

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPVRF I  AG VG+DGPT  G+FD T+++ LP  +VMA +DE EL  MV T A+ D+ P
Sbjct: 431 LPVRFPIDRAGFVGADGPTHAGSFDTTYLATLPGFVVMAAADEAELKHMVRTAAAYDEGP 490

Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
           + FRYPRG  V  +LP  RG  + IGKG+++ +G  VALL +G  + +CL A   L   G
Sbjct: 491 ISFRYPRGEGVGVELP-ERGEILAIGKGRIVKQGNKVALLSFGTRLADCLLAAEDLDAAG 549

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKW 673
           +  TVADARF KPLD  L+R+L ++H  LIT+EEG++GGF SHV  F+A +GL+D G+K 
Sbjct: 550 LSTTVADARFAKPLDHDLIRQLARHHEVLITIEEGAVGGFASHVLQFLAEEGLIDGGLKV 609

Query: 674 RPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
           RP+V+PD ++E A P    A AGL    I +T    LG+
Sbjct: 610 RPMVMPDIWMEQAKPEAMYARAGLDRAGIVSTVFKALGQ 648


>gi|397677362|ref|YP_006518900.1| 1-deoxy-D-xylulose-5-phosphate synthase [Zymomonas mobilis subsp.
           mobilis ATCC 29191]
 gi|395398051|gb|AFN57378.1| 1-deoxy-D-xylulose-5-phosphate synthase [Zymomonas mobilis subsp.
           mobilis ATCC 29191]
          Length = 650

 Score =  567 bits (1462), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 304/639 (47%), Positives = 396/639 (61%), Gaps = 18/639 (2%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD ++ P  L+ L    L+QLA E+R E  S V  T   L S L  +ELTVALH+VF
Sbjct: 7   TPLLDKIKTPAELRQLDRNSLRQLADELRKETISAVGVTGGHLGSGLGVIELTVALHYVF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D ++WDVG QTY HKILTGRR  I TLR++DG+SG+T R+ESEYD F A H   S+
Sbjct: 67  NTPKDALVWDVGHQTYPHKILTGRRDRIRTLRQRDGLSGFTQRAESEYDAFGAAHSSTSI 126

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LG A+A  +    +  V +I +G+  AG AYEAM+NA      +IVILND+  S+ P
Sbjct: 127 SAALGFAMASKLSDSDDKAVAIIGDGSMTAGMAYEAMNNAKAAGKRLIVILNDNEMSISP 186

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                    + ALSS LSR+ SS+ F  LR++ +G+  R+ +G+   A K DEYARGM  
Sbjct: 187 --------PVGALSSYLSRLISSRPFMNLRDIMRGVVNRMPKGLATAARKADEYARGMA- 237

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRR---AEDT 375
             G T FEELG YY+GPVDGHN++ LI VL+ V      GP+LVHVVT + +    AE  
Sbjct: 238 -TGGTFFEELGFYYVGPVDGHNLDQLIPVLENVRD-AKDGPILVHVVTRKGQGYAPAEAA 295

Query: 376 Q-KSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
           + K  A+++    +      P G  S  Y   F E L+ EA++D  IV + A M     L
Sbjct: 296 KDKYHAVQRLDVVSGKQAKAPPGPPS--YTSVFSEQLIKEAKQDDKIVTITAAMPTGTGL 353

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             FQ+ FPER FDVG+AEQHAVTF+AGLA  G KPFC + S FLQR YDQ+V+DV  Q L
Sbjct: 354 DRFQQYFPERMFDVGIAEQHAVTFAAGLAAAGYKPFCCLYSTFLQRGYDQLVHDVAIQNL 413

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PVRF +  AGLVG+DG T  G+FDI FM  LPNM+VMAPSDE EL +MV T+A  D  P+
Sbjct: 414 PVRFAVDRAGLVGADGATHAGSFDIAFMVNLPNMVVMAPSDEGELANMVHTMAHYDQGPI 473

Query: 555 CFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGI 614
             RYPRG  V   L G + I + IGKG+++  GK VA+L  G  ++  LKA   L   G+
Sbjct: 474 SVRYPRGNGVGVSLEGEKEI-LPIGKGRLIRRGKKVAILSLGTRLEESLKAADRLDAQGL 532

Query: 615 DVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWR 674
             +VAD RF KPLD  L R+L ++H  +IT+EEG++GGF + V    + +GL+D G+K R
Sbjct: 533 STSVADMRFAKPLDEALTRQLLKSHQVIITIEEGALGGFATQVLTMASDEGLMDDGLKIR 592

Query: 675 PIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRT 713
            + LPD +       +Q A AGL    I A   + L R 
Sbjct: 593 TLRLPDRFQPQDKQERQYAEAGLDADGIVAAVTAALQRN 631


>gi|399060904|ref|ZP_10745823.1| 1-deoxy-D-xylulose-5-phosphate synthase [Novosphingobium sp. AP12]
 gi|398036847|gb|EJL30055.1| 1-deoxy-D-xylulose-5-phosphate synthase [Novosphingobium sp. AP12]
          Length = 640

 Score =  567 bits (1462), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 308/638 (48%), Positives = 397/638 (62%), Gaps = 22/638 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V  P  L+ L   +L+QLA E+R+E+ S V +T   L S L  VELTVA+H+VF
Sbjct: 7   TPLLDEVPTPEDLRKLKPAQLRQLADELRAEMISAVGQTGGHLGSGLGVVELTVAIHYVF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR  I TLR+  G+SG+T RSESEYDPF   H   S+
Sbjct: 67  DTPADRLIWDVGHQAYPHKILTGRRERIRTLRQGGGLSGFTKRSESEYDPFGTAHSSTSI 126

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LG A+A  IKG     + VI +G   AG AYEAM+NA    + ++VILND+  S+ P
Sbjct: 127 SAALGFAIANKIKGTPGRGIAVIGDGAMSAGMAYEAMNNAREAGNRLVVILNDNDMSIAP 186

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                    +  LS+ L+R+ SS  F  LRE+A+   +R+ R +H  A K DE+ARGM  
Sbjct: 187 --------PVGGLSAYLARLVSSGQFLGLRELARKFARRLPRPLHVAAKKTDEFARGMA- 237

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRR---AEDT 375
             G TLFEELG YY+GP+DGH+++ L+ VL+ V   G  GP+LVHVVT++ +    AE+ 
Sbjct: 238 -MGGTLFEELGFYYVGPIDGHDLDALVPVLENVRDAGE-GPILVHVVTQKGKGYAPAENA 295

Query: 376 -QKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
             K   ++K      +    P G  S  Y   F +AL  EAE+D  I  + A M     L
Sbjct: 296 ADKYHGVQKFDVITGEQAKAPAGPPS--YTGVFAKALTAEAERDPTICAITAAMPSGTGL 353

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F  +FPER FDVG+AEQHAVTF+AGLA  G++PFC I S FLQRA+DQVV+DV  Q L
Sbjct: 354 DKFSAQFPERSFDVGIAEQHAVTFAAGLAAQGMRPFCAIYSTFLQRAFDQVVHDVAIQNL 413

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PVRF I  AGLVG+DG T  G+FD+T+++ LPNM+VMA +DE ELV MV T A  D  P+
Sbjct: 414 PVRFAIDRAGLVGADGATHAGSFDVTYLATLPNMVVMAAADEVELVHMVHTAALHDAGPI 473

Query: 555 CFRYPRGAIVRTDLPGYRGIP--IEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
            FRYPRG  V  +LP     P  + IGKG+V+ EG  VA+L  G  +   LKA   L   
Sbjct: 474 AFRYPRGNGVGLELP---ATPEQLAIGKGRVVREGSKVAILSLGTRLGEALKAADQLEAR 530

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 672
           G+  TVAD RF KPLD  L+R L  +H  ++TVEEGSIGG G+HV    + +GL D+G+K
Sbjct: 531 GLSTTVADLRFAKPLDTDLIRRLMLSHEVIVTVEEGSIGGLGAHVLTMASDEGLTDAGLK 590

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
            R + LPD + +H  P  Q   AGL    I  T L  L
Sbjct: 591 IRTMRLPDVFQDHDKPETQYDEAGLNAPQIVDTVLKAL 628


>gi|409436325|ref|ZP_11263509.1| 1-deoxyxylulose-5-phosphate synthase,thiamine-requiring,
           FAD-requiring [Rhizobium mesoamericanum STM3625]
 gi|408751882|emb|CCM74661.1| 1-deoxyxylulose-5-phosphate synthase,thiamine-requiring,
           FAD-requiring [Rhizobium mesoamericanum STM3625]
          Length = 640

 Score =  567 bits (1462), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 300/639 (46%), Positives = 405/639 (63%), Gaps = 20/639 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V  P  L+ L  ++L QLA E+R E+   VS+T   L + L  VELT+A+H VF
Sbjct: 7   TPLLDKVSYPADLRKLEDRDLPQLAREVRDEMIDAVSRTGGHLGAGLGVVELTIAIHSVF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D++++DVG Q Y HKILTGRR  I TLR++ G+SG+T R+ESEYDPF A H   S+
Sbjct: 67  NTPDDRLIFDVGHQCYPHKILTGRRDRIRTLRQEGGLSGFTRRAESEYDPFGAAHSSTSI 126

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVA ++      ++ VI +G   AG AYEA++NAG LD+ +IVILND+  S+ P
Sbjct: 127 SAGLGMAVASELDKTDRRVIAVIGDGAMSAGMAYEALNNAGALDARLIVILNDNDMSIAP 186

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S+ L+R+ S +++   R+  K +T  +G+ +     +  E+ARG + 
Sbjct: 187 --------PTGAMSAYLARLASGRTYMGFRDFGKKLTAYLGKNVDRAITRAVEHARGYV- 237

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G T+FEE+G Y+IGP+DGH+ E L+ VL+ V    + GPVL+HVVT++ +       +
Sbjct: 238 -TGGTMFEEMGFYHIGPIDGHSFEHLLPVLRNVRD-NANGPVLIHVVTQKGK---GYAPA 292

Query: 379 EAIEKQQEGASDSNSLPFGNY-----SRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
           EA   +  G +  + +          + +Y   F EALV EAE D  IV + A M     
Sbjct: 293 EAAADKYHGVNKFDVITGAQAKVKPNAPSYTSVFAEALVQEAELDDKIVGITAAMPNGTG 352

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L      FP R FDVG+AEQHAVTF+AGLA  G KPF  + S FLQRAYDQVV+DV  Q 
Sbjct: 353 LDKLASVFPSRCFDVGIAEQHAVTFAAGLAAEGFKPFAALYSTFLQRAYDQVVHDVAIQG 412

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPVRF I  AG VG+DGPT  G+FD TF++ LP  +VMA +DE EL  MV T A+ D  P
Sbjct: 413 LPVRFPIDRAGFVGADGPTHAGSFDTTFLATLPGFVVMAAADEAELKHMVRTAAAYDAGP 472

Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
           + FRYPRG  V  ++P  RG  ++IGKG+++ EG  VALL +G  + +CL A   L   G
Sbjct: 473 ISFRYPRGEGVGIEMP-VRGEILQIGKGRIVKEGAKVALLSFGTRLADCLLAAEDLDAAG 531

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKW 673
           +  TVADARF KPLD  L+R+L ++H  LITVEEG++GGFGS V  F+A DGLLD+G+K 
Sbjct: 532 LSTTVADARFAKPLDHDLIRQLARHHEILITVEEGAVGGFGSQVMQFLATDGLLDNGLKI 591

Query: 674 RPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
           R +V+PD ++E A P    A AGL    I +T   +LGR
Sbjct: 592 RSLVMPDIWMEQAKPEVMNAHAGLDRAGIVSTVFKVLGR 630


>gi|110677932|ref|YP_680939.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseobacter denitrificans
           OCh 114]
 gi|118595488|sp|Q16CP0.1|DXS2_ROSDO RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase 2; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase 2; Short=DXP
           synthase 2; Short=DXPS 2
 gi|109454048|gb|ABG30253.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseobacter denitrificans
           OCh 114]
          Length = 642

 Score =  567 bits (1462), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 305/651 (46%), Positives = 402/651 (61%), Gaps = 34/651 (5%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           D   TP+LDLV  P  +K L+ ++L QLA E+RSE  S VS T   L + L  VELTVAL
Sbjct: 3   DMPKTPLLDLVHRPADMKGLSDRQLVQLADELRSETVSAVSVTGGHLGAGLGVVELTVAL 62

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H VF  P DKI+WDVG Q Y HKILT RR  I TLR K G+SG+T RSES YDPF A H 
Sbjct: 63  HAVFDTPRDKIIWDVGHQCYPHKILTERRDRIRTLRMKGGLSGFTKRSESPYDPFGAAHS 122

Query: 195 CNSVSAGLGMAVARDIKG----KRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
             S+SA LG AVARD+ G         + VI +G+  AG AYEAM+NAG+L   MIVILN
Sbjct: 123 STSISAALGFAVARDLGGVVPEGLGDAIAVIGDGSMSAGMAYEAMNNAGHLKKRMIVILN 182

Query: 251 DSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVD 310
           D+  S+ P           A+SS LSR+ S + F+  +  AKG    +     E A +  
Sbjct: 183 DNEMSIAPPT--------GAMSSYLSRLYSGEPFQDFKAAAKGAVSLLPEPFREGAKRAK 234

Query: 311 EYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR 370
           +  +GM    G TLFEELG  YIGP+DGH+++ L+ +L+ V +  + GP+++H +T++ +
Sbjct: 235 DMLKGMA--VGGTLFEELGFSYIGPIDGHDLDQLLPLLRTVKARAT-GPIMIHALTKKGK 291

Query: 371 ----------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKD 420
                     +   T K + +  QQ  A  +        + +Y   F ++L+ EA KD  
Sbjct: 292 GYAPAETARDKGHATAKFDVLTGQQTKAPSN--------APSYTKVFAQSLLEEATKDDK 343

Query: 421 IVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQR 480
           I  V A M     L LF E+FP R FDVG+AEQH VTFSA LA GG+KPFC + S FLQR
Sbjct: 344 ICAVTAAMPDGTGLNLFAERFPSRCFDVGIAEQHGVTFSAALAAGGMKPFCAMYSTFLQR 403

Query: 481 AYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELV 540
            YDQVV+DV  QRLPVRF I  AGLVG+DG T  G+FDI +++ LP  +VMA +DE EL 
Sbjct: 404 GYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGSFDIAYLANLPGFVVMAAADEAELK 463

Query: 541 DMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQ 600
            MVAT  + DD P+ FR+PRG     D+P   G  +EIGKG+++ EG  VA+L +G  + 
Sbjct: 464 HMVATAVAHDDGPIAFRFPRGEGNGVDMPEV-GEVLEIGKGRIITEGTRVAILSFGTRLA 522

Query: 601 NCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHF 660
              KA   L+  GI  T+ADARF KPLD +++ +L  NH  LITVEEG+IGGFGSHV+  
Sbjct: 523 EVQKAGEALAARGITPTIADARFAKPLDREMILDLVANHEALITVEEGAIGGFGSHVAQL 582

Query: 661 IALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
           ++ +G+ D+G K+R +VLPD +I+ +SP    A+AG+    I    LS+LG
Sbjct: 583 LSDEGVFDTGFKYRSMVLPDIFIDQSSPADMYAVAGMNAADIETKVLSVLG 633


>gi|429209358|ref|ZP_19200596.1| 1-deoxy-D-xylulose 5-phosphate synthase [Rhodobacter sp. AKP1]
 gi|428187823|gb|EKX56397.1| 1-deoxy-D-xylulose 5-phosphate synthase [Rhodobacter sp. AKP1]
          Length = 648

 Score =  567 bits (1461), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 297/646 (45%), Positives = 410/646 (63%), Gaps = 30/646 (4%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V  P  +K+L+  EL++LA E+RSE+ S+V++T   L SSL  VELTVALH VF
Sbjct: 10  TPLLDRVCCPADMKALSDAELERLADEVRSEVISVVAETGGHLGSSLGVVELTVALHAVF 69

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P DK++WDVG Q Y HKILTGRR  + TLR+K G+SG+T RSES YDPF A H   S+
Sbjct: 70  NTPTDKLVWDVGHQCYPHKILTGRREQMRTLRQKGGLSGFTKRSESAYDPFGAAHSSTSI 129

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LG A+ R++       + VI +G+  AG AYEA+++AG+L+  + VILND+  S+ P
Sbjct: 130 SAALGFAMGRELGQPVGDTIAVIGDGSITAGMAYEALNHAGHLNKRLFVILNDNDMSIAP 189

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                    + AL+  L  + S   F  LR  A G+   +   + + A +  +   GM  
Sbjct: 190 P--------VGALARYLVNLSSKAPFATLRAAADGLEASLPGPLRDGARRARQLVTGM-- 239

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR-------- 370
           P G TLFEELG  Y+GP+DGH++E L+  L+  A   + GPVL+HVVT++ +        
Sbjct: 240 PGGGTLFEELGFTYVGPIDGHDMEALLQTLR-AARARTTGPVLIHVVTKKGKGYAPAENA 298

Query: 371 --RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGM 428
             +     K + +  +Q+  S +N+    NY++ +     E    EA +D  IV + A M
Sbjct: 299 PDKYHGVNKFDPVTGEQK-KSVANAP---NYTKVFGSTLTE----EAARDPRIVAITAAM 350

Query: 429 EMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVND 488
                + + Q++FP R FDVG+AEQHAVTF+AGLA  G+KPFC I S+FLQR YDQ+ +D
Sbjct: 351 PSGTGVDIMQKRFPNRVFDVGIAEQHAVTFAAGLAGAGMKPFCAIYSSFLQRGYDQIAHD 410

Query: 489 VDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVAS 548
           V  Q LPVRFVI  AGLVG+DG T  GAFD+ F++ LPNM VMA +DE EL+ M+AT  +
Sbjct: 411 VALQNLPVRFVIDRAGLVGADGATHAGAFDVGFLTSLPNMTVMAAADEAELIHMIATAVA 470

Query: 549 IDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARAL 608
            D+ P+ FR+PRG  V  ++P  RG  +E G+G+V+ EG DVA+L +GA +   L+A  L
Sbjct: 471 FDEGPIAFRFPRGEGVGVEMP-ERGTVLEPGRGRVVREGTDVAILSFGAHLHEALQAAKL 529

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLD 668
           L   G++VTVADARF +PLD  L+ +L ++H  L+TVE+G++GGFG+HV H++A  G  D
Sbjct: 530 LEAEGVNVTVADARFSRPLDTGLIDQLVRHHAALVTVEQGAMGGFGAHVMHYLANSGGFD 589

Query: 669 SGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTR 714
            G+  R + LPD +IE ASP    A AGL    IAATA   L R R
Sbjct: 590 GGLALRVMTLPDRFIEQASPEDMYADAGLRAEDIAATARGALARGR 635


>gi|347526939|ref|YP_004833686.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingobium sp. SYK-6]
 gi|345135620|dbj|BAK65229.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingobium sp. SYK-6]
          Length = 645

 Score =  567 bits (1461), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 305/654 (46%), Positives = 406/654 (62%), Gaps = 32/654 (4%)

Query: 66  LPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSL 125
           +PD+     D+  TP+LD V +P  L+ L   +L+QLA E+R+E+ S V  T   L S L
Sbjct: 1   MPDM----IDQPETPLLDQVRDPADLRKLAPGQLRQLADELRAEMISAVGVTGGHLGSGL 56

Query: 126 AAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESE 185
             VELT A+H+VF+ P D+++WDVG Q Y HKILTGRR  I TLR+  G+SG+T RSES+
Sbjct: 57  GVVELTAAIHYVFNTPEDRLVWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTKRSESQ 116

Query: 186 YDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNM 245
           YDPF A H   S+SA LG A+A  + G+    + VI +G   AG AYEAM+NA    + +
Sbjct: 117 YDPFGAAHSSTSISAALGFAIANRLTGRSGKAIAVIGDGAMSAGMAYEAMNNAREAGNRL 176

Query: 246 IVILNDSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEW 305
           IVILND+  S+ P         +  LS+ L+RI SS+ F  +RE  K + +++ R +H  
Sbjct: 177 IVILNDNDMSIAP--------PVGGLSAYLARIVSSREFLSVREALKKLARKLPRPLHHA 228

Query: 306 AAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVV 365
           A K DE+ARGM    G TLFEELG YY+GP+DGHN++ LI VL+ V  +   GPVLVHVV
Sbjct: 229 ARKTDEFARGMA--MGGTLFEELGFYYVGPIDGHNLDQLIPVLENVRDMAD-GPVLVHVV 285

Query: 366 TEENRRAEDTQKSEAIEKQQEGASDSNSL-------PFGNYSRTYDDCFIEALVMEAEKD 418
           T++ +       +EA   +  G    N +       P G  S  Y + F +AL+ EA++D
Sbjct: 286 TQKGK---GYAPAEAAADKYHGVQKFNVITGEQVKAPAGPPS--YTNVFAQALMDEAQRD 340

Query: 419 KDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFL 478
             +V + A M     L  FQ+ FP R FDVG+AEQHAVTF+AGLA  G++PFC I S FL
Sbjct: 341 DRVVAITAAMPSGTGLDKFQKAFPARCFDVGIAEQHAVTFAAGLAAQGMRPFCAIYSTFL 400

Query: 479 QRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDE 538
           QRAYDQVV+DV  Q LPVRF I  AGLVG+DG T  G+FDIT+++ LPNM+VMA +DE E
Sbjct: 401 QRAYDQVVHDVAIQNLPVRFAIDRAGLVGADGSTHAGSFDITYLATLPNMVVMAAADEAE 460

Query: 539 LVDMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIP--IEIGKGKVLVEGKDVALLGYG 596
           LV MV T A  D+ P+  RYPRG  V   LP     P  + IGKG++L EGK +A+L  G
Sbjct: 461 LVHMVHTAACHDESPIALRYPRGNGVGVALP---ATPERLAIGKGRLLREGKKIAILSLG 517

Query: 597 AMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSH 656
             ++  LKA   L   G+  +VAD RF KPLD  L+R L   H   +T+EEG+IGG G+H
Sbjct: 518 TRLEEALKAADTLDARGLSTSVADLRFAKPLDEALIRRLLTTHDVAVTIEEGAIGGLGAH 577

Query: 657 VSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
           V    + +GL+D G++ R + LPD + +   P +Q   A L   HI  T L+ L
Sbjct: 578 VLTLASDEGLIDGGLRLRTMRLPDIFQDQDKPEKQYDDARLNAPHIVETVLTAL 631


>gi|89069937|ref|ZP_01157270.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oceanicola granulosus
           HTCC2516]
 gi|89044491|gb|EAR50619.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oceanicola granulosus
           HTCC2516]
          Length = 637

 Score =  567 bits (1461), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 299/647 (46%), Positives = 401/647 (61%), Gaps = 30/647 (4%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           D+ PTP LD V  P  L+ L+  EL +LA E+R+E  S VS+T   L + L  +ELTVAL
Sbjct: 3   DRPPTPTLDKVHLPADLRRLSDGELHKLAHELRAETISAVSETGGHLGAGLGVIELTVAL 62

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H VF  P DK++WDV  Q+Y HKILTGRR  I TLR+KDG+SG+  RSES YDPF A H 
Sbjct: 63  HAVFETPRDKLIWDVSHQSYPHKILTGRRDRIRTLRQKDGLSGFCKRSESPYDPFGAAHS 122

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA LG A ARD+ G     + VI +G   AG AYEAM+NAG+L   +IVILND+  
Sbjct: 123 STSISAALGFAAARDLGGDAGDAIAVIGDGAMSAGMAYEAMNNAGHLGKRLIVILNDNEM 182

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+ P         + A+SS LSR+ +   F++L+  AKG    +     + A +  E  +
Sbjct: 183 SIAP--------PVGAMSSYLSRLYAGAPFQELKAAAKGAVSFLPPPFQQGAKRAKEMLK 234

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---- 370
            +    G TLFEELG  Y+GP+DGH++E L++VL+ V +    GP+L+H +T + +    
Sbjct: 235 HLA--VGGTLFEELGFSYVGPIDGHDLEQLLAVLRTVKARAD-GPILIHAITRKGKGYAP 291

Query: 371 ------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVV 424
                 +     K + I  +Q+ A  +        + +Y   F +AL+ EA +D  +V V
Sbjct: 292 AEGAADKGHGVSKFDVITGEQKKAKSN--------APSYTSVFAKALIAEAARDDKVVAV 343

Query: 425 HAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQ 484
            A M     L+ F E++  R FDVG+AEQHAVTF+AG+A GG+KPFC I S FLQR YDQ
Sbjct: 344 TAAMPDGTGLKSFMERYASRCFDVGIAEQHAVTFAAGMAAGGMKPFCAIYSTFLQRGYDQ 403

Query: 485 VVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVA 544
           VV+DV  QRLPVRF I  AGLVG+DG T  GAFD+ +++ LP   VMA +DE ELV MVA
Sbjct: 404 VVHDVAIQRLPVRFAIDRAGLVGADGATHAGAFDVAYLANLPGFTVMAAADEAELVRMVA 463

Query: 545 TVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLK 604
           T A+ DD P+ FR+PRG  V  ++P     P+EIGKG+++ EG  VA+L +G  +Q    
Sbjct: 464 TAAAHDDGPIAFRFPRGEGVGVEMPA-DPQPLEIGKGRIVREGSRVAILSFGTRLQEAET 522

Query: 605 ARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALD 664
           A   L+  GI  T+ADARF KPLD +L+  L + H  LIT+EEG+IGGFGSHV+  +A  
Sbjct: 523 ACERLAGRGITPTLADARFAKPLDEELILRLAREHDALITLEEGAIGGFGSHVAQLLAEK 582

Query: 665 GLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
           G+ D G+ +R +VLPD +I+ ASP     +AGL   HI    L  LG
Sbjct: 583 GVFDGGLAYRSMVLPDIFIDQASPRDMYDVAGLNAEHIEQKVLEALG 629


>gi|118595583|sp|Q5FUB1.2|DXS_GLUOX RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
          Length = 660

 Score =  567 bits (1461), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 304/652 (46%), Positives = 407/652 (62%), Gaps = 34/652 (5%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P LD V  P  +++L++ +LKQLA E+RSE    VS T   L +SL  VELTVALH VF+
Sbjct: 15  PELDRVRFPADMRNLSVDQLKQLADELRSETVDAVSTTGGHLGASLGVVELTVALHAVFN 74

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+I+WDVG Q Y HKILTGRR  I TLR+ +G+SG+T R+ESEYDPF A H   S+S
Sbjct: 75  TPDDRIIWDVGHQAYPHKILTGRRDRIRTLRQPEGLSGFTRRAESEYDPFGAAHSSTSIS 134

Query: 200 AGLGMAVARDIKGKRE------CIVTVISNGTTMAGQAYEAMSNA---GYLDSNMIVILN 250
           AGLGMAVA  ++ + +       ++ VI +G+  AG AYEAM+NA   G   + +IV+LN
Sbjct: 135 AGLGMAVAHHLRAEEDPSYHERNVIAVIGDGSISAGMAYEAMNNAAVAGPGANRLIVVLN 194

Query: 251 DSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVD 310
           D+  S+ P +         ++S  LSR+ SS+ F  LR++A  + KR+   +   A + +
Sbjct: 195 DNEMSIAPPV--------GSMSDYLSRLMSSRQFFSLRDLAGKVAKRLPGKIERTAKRAE 246

Query: 311 EYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR 370
           EYARGMI   G TLFEELG YY+GPV+GH++  L+ +L+ +      GP+L+H++TE+ R
Sbjct: 247 EYARGMI--TGGTLFEELGFYYVGPVNGHDMSQLVPILRNLRDADDQGPILLHIITEKGR 304

Query: 371 RAEDTQ----KSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHA 426
             +  +    K  A+ K      +    P G  S  Y   F   L+  A+ D  ++ + A
Sbjct: 305 GYKPAEAAGDKYHAVSKFNVVTGEQKKAPAGPPS--YTSIFSRELMRRAKTDDKLITITA 362

Query: 427 GMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVV 486
            M     L  F + +P+R+FDVG+AEQHAVTF+AG+A  GL+PFC I S FLQRAYDQVV
Sbjct: 363 AMPSGTGLNAFAKAYPDRFFDVGIAEQHAVTFAAGIASEGLRPFCAIYSTFLQRAYDQVV 422

Query: 487 NDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATV 546
           +DV  Q LPVRF I  AGLVG+DG T  GAFD+ ++ CLPNM+VMAPSDE EL+   AT 
Sbjct: 423 HDVALQNLPVRFAIDRAGLVGADGATHAGAFDLNYLCCLPNMVVMAPSDEVELLHATATA 482

Query: 547 ASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGK-------DVALLGYGAMV 599
              D  P+ FRYPRG  +  DLP  +G  +EIGKG+++ E +        VA+L  G  +
Sbjct: 483 CEYDAGPIAFRYPRGNGIGLDLP-EKGEVLEIGKGRIVREARRAPNARGGVAILSLGPRM 541

Query: 600 QNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSH 659
              L+A   L+  G+ VTVADARF KP+D  LV +L + H   IT+EEG+IGGF S V  
Sbjct: 542 HESLRAADQLAAQGVPVTVADARFAKPIDKALVEDLARQHEVFITIEEGAIGGFSSLVVQ 601

Query: 660 FIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
            +A  GLLD  VK+RP+ LPD YI+H +   Q   AGLT  HI  TA   LG
Sbjct: 602 HLAETGLLDK-VKFRPMALPDRYIDHNTQDAQYEDAGLTAPHIVRTAADALG 652


>gi|56552130|ref|YP_162969.1| 1-deoxy-D-xylulose-5-phosphate synthase [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|260752342|ref|YP_003225235.1| 1-deoxy-D-xylulose-5-phosphate synthase [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
 gi|81354958|sp|Q5NN52.1|DXS1_ZYMMO RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase 1; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase 1; Short=DXP
           synthase 1; Short=DXPS 1
 gi|56543704|gb|AAV89858.1| deoxyxylulose-5-phosphate synthase [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|258551705|gb|ACV74651.1| deoxyxylulose-5-phosphate synthase [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
          Length = 649

 Score =  567 bits (1461), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 303/645 (46%), Positives = 399/645 (61%), Gaps = 18/645 (2%)

Query: 73  FWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTV 132
            +  + TP+LD ++ P  L+ L    L+QLA E+R E  S V  T   L S L  +ELTV
Sbjct: 1   MFPNDKTPLLDKIKTPAELRQLDRNSLRQLADELRKETISAVGVTGGHLGSGLGVIELTV 60

Query: 133 ALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAG 192
           ALH+VF+ P D ++WDVG QTY HKILTGRR  I TLR++DG+SG+T R+ESEYD F A 
Sbjct: 61  ALHYVFNTPKDALVWDVGHQTYPHKILTGRRDRIRTLRQRDGLSGFTQRAESEYDAFGAA 120

Query: 193 HGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDS 252
           H   S+SA LG A+A  +    +  V +I +G+  AG AYEAM+NA      +IVILND+
Sbjct: 121 HSSTSISAALGFAMASKLSDSDDKAVAIIGDGSMTAGMAYEAMNNAKAAGKRLIVILNDN 180

Query: 253 RHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEY 312
             S+ P         + ALSS LSR+ SS+ F  LR++ +G+  R+ +G+   A K DEY
Sbjct: 181 EMSISP--------PVGALSSYLSRLISSRPFMNLRDIMRGVVNRMPKGLATAARKADEY 232

Query: 313 ARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRR- 371
           ARGM    G T FEELG YY+GPVDGHN++ LI VL+ V      GP+LVHVVT + +  
Sbjct: 233 ARGMA--TGGTFFEELGFYYVGPVDGHNLDQLIPVLENVRDAKD-GPILVHVVTRKGQGY 289

Query: 372 --AEDTQ-KSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGM 428
             AE  + K  A+++    +      P G  S  Y   F E L+ EA++D  IV + A M
Sbjct: 290 APAEAAKDKYHAVQRLDVVSGKQAKAPPGPPS--YTSVFSEQLIKEAKQDDKIVTITAAM 347

Query: 429 EMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVND 488
                L  FQ+ FPER FDVG+AEQHAVTF+AGLA  G KPFC + S FLQR YDQ+V+D
Sbjct: 348 PTGTGLDRFQQYFPERMFDVGIAEQHAVTFAAGLAAAGYKPFCCLYSTFLQRGYDQLVHD 407

Query: 489 VDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVAS 548
           V  Q LPVRF +  AGLVG+DG T  G+FD+ FM  LPNM+VMAPSDE EL +MV ++A 
Sbjct: 408 VAIQNLPVRFAVDRAGLVGADGATHAGSFDLAFMVNLPNMVVMAPSDERELANMVHSMAH 467

Query: 549 IDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARAL 608
            D  P+  RYPRG  V   L G + I + IGKG+++  GK VA+L  G  ++  LKA   
Sbjct: 468 YDQGPISVRYPRGNGVGVSLEGEKEI-LPIGKGRLIRRGKKVAILSLGTRLEESLKAADR 526

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLD 668
           L   G+  +VAD RF KPLD  L R+L ++H  +IT+EEG++GGF + V    + +GL+D
Sbjct: 527 LDAQGLSTSVADMRFAKPLDEALTRQLLKSHQVIITIEEGALGGFATQVLTMASDEGLMD 586

Query: 669 SGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRT 713
            G+K R + LPD +       +Q A AGL    I A  +S L R 
Sbjct: 587 DGLKIRTLRLPDRFQPQDKQERQYAEAGLDADGIVAAVISALHRN 631


>gi|159045834|ref|YP_001534628.1| 1-deoxy-D-xylulose-5-phosphate synthase [Dinoroseobacter shibae DFL
           12]
 gi|157913594|gb|ABV95027.1| 1-deoxy-D-xylulose-5-phosphate synthase [Dinoroseobacter shibae DFL
           12]
          Length = 643

 Score =  567 bits (1460), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 302/651 (46%), Positives = 403/651 (61%), Gaps = 34/651 (5%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           D+  TP+LD V+ P  +K L+ +EL  LA ++R+E  S VS T   L + L  VELTVAL
Sbjct: 3   DRPHTPVLDRVKTPDDMKGLSDRELVALARDLRAETISAVSVTGGHLGAGLGVVELTVAL 62

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H VF AP D+I+WDV  Q Y HKILTGRR  I TLR KDG+SG+T RSES YDPF A H 
Sbjct: 63  HAVFDAPRDRIIWDVSHQCYPHKILTGRRDRIRTLRMKDGLSGFTKRSESPYDPFGAAHS 122

Query: 195 CNSVSAGLGMAVARDIKGKREC----IVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
             S+SA LG AVARD+ G  E      + VI +G   AG A+EA++NAG+L   +IVILN
Sbjct: 123 STSISAALGFAVARDLGGAPEHGIGDAIAVIGDGAISAGMAFEALNNAGHLKKRLIVILN 182

Query: 251 DSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVD 310
           D+  S+ P           A+SS L+R+ +   F++ +  AKG    +     E A +  
Sbjct: 183 DNEMSIAPPT--------GAMSSYLNRLYAGAPFQEFKAAAKGAVSLLPPPFQEGAKRAK 234

Query: 311 EYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR 370
           +  + M    G TLFEELG  Y+GP+DGH++E L+SVL+ V +    GP+L+H +T++ +
Sbjct: 235 DILKHMT--IGGTLFEELGFSYVGPIDGHDMEQLLSVLRTVKARAD-GPILIHAITKKGK 291

Query: 371 ----------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKD 420
                     +   T K + +   Q+ A  +        + TY + F E L+ EAE+D  
Sbjct: 292 GYAPAEGAADKGHATAKFDVVSGAQKKAPSN--------APTYTNVFAETLIDEAERDSR 343

Query: 421 IVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQR 480
           IV V A M     L  F ++F  R FDV +AEQH VTF AGLA GG+KPFC + S FLQR
Sbjct: 344 IVAVTAAMPSGTGLDKFAKRFAARTFDVAIAEQHGVTFCAGLAAGGMKPFCTMYSTFLQR 403

Query: 481 AYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELV 540
            YDQVV+DV  Q LPVRF I  AGLVG+DG T  GA+D  ++S LPNM+VMA +DE EL 
Sbjct: 404 GYDQVVHDVALQNLPVRFAIDRAGLVGADGATHAGAYDTAYLSNLPNMVVMAAADEAELR 463

Query: 541 DMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQ 600
            MVAT  + D  P+ FR+PRG  V  +LP  RG+P+EIGKG+++ EG  VA+L +G  + 
Sbjct: 464 HMVATAVAHDSGPIAFRFPRGEGVGVELP-ERGVPLEIGKGRIIAEGSRVAILSFGTRLA 522

Query: 601 NCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHF 660
              +A   L+  GI  TVADARF KPLD  L+  L   H  LIT+EEG++GGFGSHV+  
Sbjct: 523 EVREACEALTARGITPTVADARFAKPLDRDLILRLAAEHEALITIEEGAVGGFGSHVAQL 582

Query: 661 IALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
           ++ +G+ D+G+K+R +VLPD +I+ ASP     +AGL    I A  LS+LG
Sbjct: 583 LSEEGVFDTGLKFRSMVLPDTFIDQASPRDMYDIAGLNAPDIEAKVLSVLG 633


>gi|399966672|gb|AFP65821.1| 1-deoxy-D-xylulose 5-phosphate synthase, partial [Eriobotrya
           japonica]
          Length = 483

 Score =  567 bits (1460), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 300/490 (61%), Positives = 368/490 (75%), Gaps = 20/490 (4%)

Query: 243 SNMIVILNDSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRG 301
           S+MI+ILND++  SL     + P   + ALSS LSR+ S++  R+LREVAKG+TK+IG  
Sbjct: 1   SDMIIILNDNKQVSLPTASLDGPIPPVGALSSALSRLLSNRPLRELREVAKGVTKQIGGS 60

Query: 302 MHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVL 361
           +H  AAKVDEYARGMI   GS+LFEELGLYYIGPVDGHNI+DLIS+L+EV    + GPVL
Sbjct: 61  VHNLAAKVDEYARGMISGTGSSLFEELGLYYIGPVDGHNIDDLISILKEVKITKTTGPVL 120

Query: 362 VHVVTEENR------RAED----TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEAL 411
           + +VTE+ R      +A D      K +    +Q  AS S        +++Y   F EAL
Sbjct: 121 IRLVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKASAS--------TQSYTTYFAEAL 172

Query: 412 VMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFC 471
           + EAE DKDIV +HA M     + LF  +FP R FDVG+AEQHAVTF+AGLAC GLKPFC
Sbjct: 173 IAEAEADKDIVAIHAAMGGGTGMNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFC 232

Query: 472 IIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVM 531
            I S+FLQRAYDQVV+DVD Q+LPVRF +  AGLVG+DGPT  G+FD+TFM+CLPNM+VM
Sbjct: 233 AIYSSFLQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHSGSFDVTFMACLPNMVVM 292

Query: 532 APSDEDELVDMVATVASIDDRPVCFRYPRGAIVRTDLP-GYRGIPIEIGKGKVLVEGKDV 590
           APSDE EL DMVAT A+IDDRP CFRYPRG  V  +LP G +G P+E+GKG++L+EG+ V
Sbjct: 293 APSDEAELFDMVATAAAIDDRPSCFRYPRGNGVGVELPLGNKGTPLEVGKGRILIEGERV 352

Query: 591 ALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI 650
           ALLGYGA VQ+CL A +L+   G+ +TVADARFCKPLD  L+R L ++H FLITVEEGS+
Sbjct: 353 ALLGYGAAVQSCLAASSLVESHGLRLTVADARFCKPLDRALIRSLAKSHEFLITVEEGSV 412

Query: 651 GGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
           GGFGSHV+HF+ALDGLLD  +KWRPIVLPD YI+H SP  QLA AGLT  HIAAT  ++L
Sbjct: 413 GGFGSHVAHFLALDGLLDGKLKWRPIVLPDRYIDHGSPADQLAEAGLTPSHIAATVFNML 472

Query: 711 GRTREALLLM 720
           G+TREAL +M
Sbjct: 473 GQTREALEIM 482


>gi|15888088|ref|NP_353769.1| 1-deoxy-D-xylulose-5-phosphate synthase [Agrobacterium fabrum str.
           C58]
 gi|22095590|sp|Q8UHD7.1|DXS_AGRT5 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|15155716|gb|AAK86554.1| 1-deoxy-D-xylulose-5-phosphate synthase [Agrobacterium fabrum str.
           C58]
          Length = 639

 Score =  567 bits (1460), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 298/639 (46%), Positives = 405/639 (63%), Gaps = 20/639 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V  P  LK +  ++L +LA E+R E+   VSKT   L + L  VELT+A+H VF
Sbjct: 7   TPLLDRVNFPSDLKEIDDRDLPELARELRDEMIDAVSKTGGHLGAGLGVVELTIAIHKVF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D++++DVG Q Y HKILTGRR  I TLR++DG+SG+T R+ESEYD F AGH   S+
Sbjct: 67  NTPEDRLIFDVGHQCYPHKILTGRRDRIRTLRQEDGLSGFTRRAESEYDDFGAGHSSTSI 126

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVA  + G    ++ VI +G+  AG A+EA++NAG LD+ +IVILND+  S+ P
Sbjct: 127 SAGLGMAVAAGLDGSDRKVIAVIGDGSMSAGMAFEALNNAGALDARLIVILNDNDMSIAP 186

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S+ L+R+ S +++   R+  K +T  +G+ +     +   +ARG + 
Sbjct: 187 --------PTGAMSAYLARLASGRTYMGFRDFGKKLTAYLGKTIDRAITRAVTHARGYV- 237

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G TLFEELG Y+IGP+DGH+ + L+ VL+ V      GPVL+HVVT++ +       +
Sbjct: 238 -TGGTLFEELGFYHIGPIDGHSFDHLLPVLRNVRD-NQKGPVLIHVVTQKGK---GYAPA 292

Query: 379 EAIEKQQEGASDSNSLPFGNY-----SRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
           EA   +  G +  + +          + +Y   F EAL+ EA  D+ I+ V A M     
Sbjct: 293 EAAADKYHGVNKFDVITGAQAKAKPNAPSYTSVFAEALIQEATLDEKIIGVTAAMPNGTG 352

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L    E FP R FDVG+AEQHAVTF+AGLA  G KPFC + S FLQR YDQ+V+DV  Q 
Sbjct: 353 LDKMAELFPSRTFDVGIAEQHAVTFAAGLAADGYKPFCALYSTFLQRGYDQLVHDVAIQS 412

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPVRF I  AG VG+DGPT  G+FD TF++ LP M+VMA +DE EL  MV T A+ D+ P
Sbjct: 413 LPVRFPIDRAGFVGADGPTHAGSFDTTFLATLPGMVVMAAADEAELKHMVRTAAAYDEGP 472

Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
           + FRYPRG  V  ++P  RG  ++IGKG+++ EG  VALL +G  +  CL A   L   G
Sbjct: 473 ISFRYPRGEGVGVEMPA-RGEILQIGKGRIIKEGTKVALLSFGTRLAECLAAAEDLDAAG 531

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKW 673
           +  TVADARF KPLD+ L+R+L  +H  L+T+EEGS+GGFG+HV HF+A  GLLD G K 
Sbjct: 532 LSTTVADARFAKPLDLDLIRQLAAHHEVLVTIEEGSVGGFGAHVLHFMASAGLLDHGPKV 591

Query: 674 RPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
           R + LPD ++E A P    A AGL    I +T  + LG+
Sbjct: 592 RTLTLPDQWVEQAKPETMYANAGLDRAGIVSTVFNALGQ 630


>gi|440225750|ref|YP_007332841.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium tropici CIAT
           899]
 gi|440037261|gb|AGB70295.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium tropici CIAT
           899]
          Length = 638

 Score =  567 bits (1460), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 303/641 (47%), Positives = 406/641 (63%), Gaps = 20/641 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V+ P  L+ L  +EL QLA E+R E+   VS+T   L + L  VELT+A+H VF
Sbjct: 7   TPLLDRVQYPSDLRKLEDRELPQLAREVRDEMIDAVSRTGGHLGAGLGVVELTIAIHSVF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D++++DVG Q Y HKILTGRR  I TLR+++G+SG+T R+ESEYDPF A H   S+
Sbjct: 67  NTPNDRLIFDVGHQCYPHKILTGRRDRIRTLRQENGLSGFTRRAESEYDPFGAAHSSTSI 126

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVA ++      ++ VI +G   AG AYEA++NAG LD+ +IVILND+  S+ P
Sbjct: 127 SAGLGMAVAAELDNADRRVIAVIGDGAMSAGMAYEALNNAGALDARLIVILNDNDMSIAP 186

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S+ L+R+ S +++   R+  K +T  +G+ +     +  E+ARG + 
Sbjct: 187 --------PTGAMSAYLARLASGRTYMGFRDFGKKLTAYLGKKVDRAITRAVEHARGYV- 237

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G T+FEE+G Y+IGP+DGH+ E L+ VL+ V    + GPVL+HVVT++ +       +
Sbjct: 238 -TGGTMFEEMGFYHIGPIDGHSFEHLLPVLRNVRD-NAQGPVLIHVVTQKGK---GYAPA 292

Query: 379 EAIEKQQEGASDSNSLPFGNY-----SRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
           EA   +  G +  + +          + +Y   F +ALV EA  D  IV + A M     
Sbjct: 293 EAAADKYHGVNKFDVITGAQTKVKPNAPSYTSVFADALVQEATLDDKIVGITAAMPNGTG 352

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L   QE FP+R FDVG+AEQHAVTF+AGLA  G KPF  + S FLQRAYDQVV+DV  Q 
Sbjct: 353 LDKLQEIFPKRCFDVGIAEQHAVTFAAGLAAEGYKPFAALYSTFLQRAYDQVVHDVAIQG 412

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPVRF I  AG VG+DGPT  G+FD  F++ LP  +VMA +DE EL  MV T A+ D  P
Sbjct: 413 LPVRFPIDRAGFVGADGPTHAGSFDTAFLATLPGFVVMAAADEAELKHMVRTAAAYDLGP 472

Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
           + FRYPRG  V  DLP  RG  +EIGKG+V+ +G  VALL +G  + + L A   L   G
Sbjct: 473 ISFRYPRGEGVGVDLP-ERGQILEIGKGRVIKQGTKVALLSFGTRLADSLAAAEDLDAAG 531

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKW 673
           +  TVADARF KPLD  L+R+L  +H  LIT+EEGS+GGFGS V  F+A +GLLDSG+K 
Sbjct: 532 LSTTVADARFAKPLDHDLIRQLAAHHEILITIEEGSVGGFGSQVMQFLANEGLLDSGLKI 591

Query: 674 RPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTR 714
           R +V+PD ++E A P    A+AGL    I  T    LGR R
Sbjct: 592 RSLVMPDIWMEQAKPEAMNAMAGLDRAGIVQTVFRALGRGR 632


>gi|126462659|ref|YP_001043773.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacter sphaeroides
           ATCC 17029]
 gi|221639678|ref|YP_002525940.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacter sphaeroides
           KD131]
 gi|126104323|gb|ABN77001.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Rhodobacter sphaeroides
           ATCC 17029]
 gi|221160459|gb|ACM01439.1| 1-deoxy-D-xylulose-5-phosphate synthase 1 [Rhodobacter sphaeroides
           KD131]
          Length = 648

 Score =  567 bits (1460), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 297/646 (45%), Positives = 409/646 (63%), Gaps = 30/646 (4%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V  P  +K+L+  EL++LA E+RSE+ S+V++T   L SSL  VELTVALH VF
Sbjct: 10  TPLLDRVCCPADMKALSDAELERLADEVRSEVISVVAETGGHLGSSLGVVELTVALHAVF 69

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P DK++WDVG Q Y HKILTGRR  + TLR+K G+SG+T RSES YDPF A H   S+
Sbjct: 70  NTPTDKLVWDVGHQCYPHKILTGRREQMRTLRQKGGLSGFTKRSESAYDPFGAAHSSTSI 129

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LG A+ R++       + VI +G+  AG AYEA+++AG+L+  + VILND+  S+ P
Sbjct: 130 SAALGFAMGRELGQPVGDTIAVIGDGSITAGMAYEALNHAGHLNKRLFVILNDNDMSIAP 189

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                    + AL+  L  + S   F  LR  A G+   +   + + A +  +   GM  
Sbjct: 190 P--------VGALARYLVNLSSKAPFATLRAAADGLEASLPGPLRDGARRARQLVTGM-- 239

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR-------- 370
           P G TLFEELG  Y+GP+DGH++E L+  L+  A   + GPVL+HVVT++ +        
Sbjct: 240 PGGGTLFEELGFTYVGPIDGHDMEALLQTLR-AARARTTGPVLIHVVTKKGKGYAPAENA 298

Query: 371 --RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGM 428
             +     K + +  +Q+  S +N+    NY++ +     E    EA +D  IV + A M
Sbjct: 299 PDKYHGVNKFDPVTGEQK-KSVANAP---NYTKVFGSTLTE----EAARDPRIVAITAAM 350

Query: 429 EMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVND 488
                + + Q++FP R FDVG+AEQHAVTF+AGLA  G+KPFC I S+FLQR YDQ+ +D
Sbjct: 351 PSGTGVDIMQKRFPNRVFDVGIAEQHAVTFAAGLAGAGMKPFCAIYSSFLQRGYDQIAHD 410

Query: 489 VDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVAS 548
           V  Q LPVRFVI  AGLVG+DG T  GAFD+ F++ LPNM VMA +DE EL+ M+AT  +
Sbjct: 411 VALQNLPVRFVIDRAGLVGADGATHAGAFDVGFLTSLPNMTVMAAADEAELIHMIATAVA 470

Query: 549 IDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARAL 608
            D+ P+ FR+PRG  V  ++P  RG  +E G+G+V+ EG DVA+L +GA +   L+A  L
Sbjct: 471 FDEGPIAFRFPRGEGVGVEMP-ERGTVLEPGRGRVVREGTDVAILSFGAHLHEALQAAKL 529

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLD 668
           L   G+ VTVADARF +PLD  L+ +L ++H  L+TVE+G++GGFG+HV H++A  G  D
Sbjct: 530 LEAEGVSVTVADARFSRPLDTGLIDQLVRHHAALVTVEQGAMGGFGAHVMHYLANSGGFD 589

Query: 669 SGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTR 714
            G+  R + LPD +IE ASP    A AGL    IAATA   L R R
Sbjct: 590 GGLALRVMTLPDRFIEQASPEDMYADAGLRAEDIAATARGALARGR 635


>gi|349687975|ref|ZP_08899117.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconacetobacter
           oboediens 174Bp2]
          Length = 664

 Score =  566 bits (1459), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 308/653 (47%), Positives = 411/653 (62%), Gaps = 35/653 (5%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P LD V  P  +++L++++LKQLA E+RSE    VS T   L +SL  VELTVALH VF 
Sbjct: 8   PQLDRVRMPHDMRNLSVEQLKQLAEELRSETIDAVSTTGGHLGASLGVVELTVALHAVFD 67

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG Q Y HKILTGRR  I TLR+  G+SG+T RSESEYDPF A H   S+S
Sbjct: 68  TPDDRVIWDVGHQAYPHKILTGRRERIRTLRQPGGLSGFTRRSESEYDPFGAAHSSTSIS 127

Query: 200 AGLGMAVARDIKG------KRECIVTVISNGTTMAGQAYEAMSNAGYLD---SNMIVILN 250
           AGLGMAVA  ++       +   ++ VI +G+  AG AYEAM+NA +       +IV+LN
Sbjct: 128 AGLGMAVAHHLRAEEDPSYRERNVIAVIGDGSISAGMAYEAMNNASHCGPGAERLIVVLN 187

Query: 251 DSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVD 310
           D+  S+ P +         A+S+ LSR+ SS+ F  LRE+A  M KR+   +   A K D
Sbjct: 188 DNEMSIAPPV--------GAMSNYLSRLMSSRKFLSLRELAAKMAKRLPGRLERTAKKAD 239

Query: 311 EYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN- 369
           EYARG++   G TLFEELG YY+GPVDGH++  L+ +L+ +     +GPVL+HV+TE+  
Sbjct: 240 EYARGIM--TGGTLFEELGFYYVGPVDGHDMNQLVHILRNLRDAEDVGPVLLHVITEKGH 297

Query: 370 --RRAEDT-QKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHA 426
             + AE    K  A+ K      +    P G  S  Y   F + LV +A  D  IV + A
Sbjct: 298 GYKPAESAGDKYHAVSKFNVVTGEQKKGPSGPPS--YTSVFAKELVRQASTDDRIVTITA 355

Query: 427 GMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVV 486
            M     L  F   +P+R+FDVG+AEQHAVTF+AG+A  GL+PFC I S FLQRAYDQV+
Sbjct: 356 AMPSGTGLDKFARAYPDRFFDVGIAEQHAVTFAAGMATEGLRPFCAIYSTFLQRAYDQVM 415

Query: 487 NDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATV 546
           +DV  Q+LPVRF I  AGLVG+DG T  GAFDI ++ CLP M +MAPS+E EL+ M AT 
Sbjct: 416 HDVVLQKLPVRFAIDRAGLVGADGATHAGAFDIAYLGCLPGMTLMAPSNELELLHMTATS 475

Query: 547 ASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVE-----GKD---VALLGYGAM 598
            + D+ P+  RYPRG  +  +LP    I +EIG+G+++ E     G +   +A+L  G  
Sbjct: 476 IAFDEGPIGLRYPRGGGLGLELPAAGQI-LEIGRGRIVREMTRQSGPEQGGIAILSLGPR 534

Query: 599 VQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVS 658
           + + LKA  +L+  G+  TVADARF KP+D  LV +L +NH  LIT+EEGS+GGFGS+V 
Sbjct: 535 LADALKAADMLAAQGLSPTVADARFAKPIDTALVEQLARNHAVLITIEEGSVGGFGSYVM 594

Query: 659 HFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
             +A  GLLD  V++RP+ LPD +I+H +   Q   AGL    I  TAL  LG
Sbjct: 595 THLAKTGLLDR-VRFRPMTLPDRFIDHNTQAAQYHEAGLDAAAITNTALEALG 646


>gi|384411041|ref|YP_005620406.1| deoxyxylulose-5-phosphate synthase [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|335931415|gb|AEH61955.1| deoxyxylulose-5-phosphate synthase [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
          Length = 649

 Score =  566 bits (1459), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 303/645 (46%), Positives = 399/645 (61%), Gaps = 18/645 (2%)

Query: 73  FWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTV 132
            +  + TP+LD ++ P  L+ L    L+QLA E+R E  S V  T   L S L  +ELTV
Sbjct: 1   MFPNDKTPLLDKIKTPAELRQLDRNSLRQLADELRKETISAVGVTGGHLGSGLGVIELTV 60

Query: 133 ALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAG 192
           ALH+VF+ P D ++WDVG QTY HKILTGRR  I TLR++DG+SG+T R+ESEYD F A 
Sbjct: 61  ALHYVFNTPKDALVWDVGHQTYPHKILTGRRDRIRTLRQRDGLSGFTQRAESEYDAFGAA 120

Query: 193 HGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDS 252
           H   S+SA LG A+A  +    +  V +I +G+  AG AYEAM+NA      +IVILND+
Sbjct: 121 HSSTSISAALGFAMASKLSDSDDKAVAIIGDGSMTAGMAYEAMNNAKAAGKRLIVILNDN 180

Query: 253 RHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEY 312
             S+ P         + ALSS LSR+ SS+ F  LR++ +G+  R+ +G+   A K DEY
Sbjct: 181 EMSISP--------PVGALSSYLSRLISSRPFMNLRDIMRGVVNRMPKGLATAARKADEY 232

Query: 313 ARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRR- 371
           ARGM    G T FEELG YY+GPVDGHN++ LI VL+ V      GP+LVHVVT + +  
Sbjct: 233 ARGMA--TGGTFFEELGFYYVGPVDGHNLDQLIPVLENVRDAKD-GPILVHVVTRKGQGY 289

Query: 372 --AEDTQ-KSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGM 428
             AE  + K  A+++    +      P G  S  Y   F E L+ EA++D  IV + A M
Sbjct: 290 APAEAAKDKYHAVQRLDVVSGKQAKAPPGPPS--YTSVFSEQLIKEAKQDDKIVTITAAM 347

Query: 429 EMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVND 488
                L  FQ+ FPER FDVG+AEQHAVTF+AGLA  G KPFC + S FLQR YDQ+V+D
Sbjct: 348 PTGTGLDRFQQYFPERMFDVGIAEQHAVTFAAGLAAAGYKPFCCLYSTFLQRGYDQLVHD 407

Query: 489 VDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVAS 548
           V  Q LPVRF +  AGLVG+DG T  G+FD+ FM  LPNM+VMAPSDE EL +MV ++A 
Sbjct: 408 VAIQNLPVRFAVDRAGLVGADGATHAGSFDLAFMVNLPNMVVMAPSDERELANMVHSMAH 467

Query: 549 IDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARAL 608
            D  P+  RYPRG  V   L G + I + IGKG+++  GK VA+L  G  ++  LKA   
Sbjct: 468 YDQGPISVRYPRGNGVGVSLEGEKEI-LPIGKGRLIRRGKKVAILSLGTRLEESLKAADR 526

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLD 668
           L   G+  +VAD RF KPLD  L R+L ++H  +IT+EEG++GGF + V    + +GL+D
Sbjct: 527 LDAQGLSTSVADMRFAKPLDEALTRQLLKSHQVIITIEEGALGGFATQVLTMASDEGLVD 586

Query: 669 SGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRT 713
            G+K R + LPD +       +Q A AGL    I A  +S L R 
Sbjct: 587 DGLKIRTLRLPDRFQPQDKQERQYAEAGLDADGIVAAVISALHRN 631


>gi|426401571|ref|YP_007020543.1| 1-deoxy-D-xylulose-5-phosphate synthase [Candidatus Endolissoclinum
           patella L2]
 gi|425858239|gb|AFX99275.1| 1-deoxy-D-xylulose-5-phosphate synthase [Candidatus Endolissoclinum
           patella L2]
          Length = 637

 Score =  566 bits (1459), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 306/636 (48%), Positives = 406/636 (63%), Gaps = 18/636 (2%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD++  P  LK L++ +L+Q+A E+R+E  S VS T   L +SL  VELTVALHHVF
Sbjct: 7   TPLLDVISTPDDLKELSVSQLRQVADELRAETISAVSITGGHLGASLGIVELTVALHHVF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P DK++ DVG Q Y HKILTGRR  I TLR+  G+SG+T RSES+YD F AGH   S+
Sbjct: 67  DTPYDKVILDVGHQAYPHKILTGRRDRIRTLRQGGGLSGFTKRSESKYDSFGAGHSSTSI 126

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           S+GLGM  ARD+ GK   +V+VI +G   AG AYEA++NAG   S+++VILND++ S+  
Sbjct: 127 SSGLGMIAARDLLGKDFDVVSVIGDGAMSAGMAYEAINNAGASASSILVILNDNKMSI-- 184

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                    + A+S+ LSRI SS+SF  L E+ K +T+   R +     +  ++AR ++ 
Sbjct: 185 ------SQPVGAMSAYLSRIVSSRSFSSLHELKKQLTQHFPRSLDLVTRQAKKFARDIL- 237

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR----RAED 374
            +G+TLFE++G +YIGPVDGHNI+ L+ +L+++      GPVL+H+VTE+ R       +
Sbjct: 238 -RGNTLFEKMGFFYIGPVDGHNIDHLVLILKKLKG-SKHGPVLLHIVTEKGRGHPFAKNN 295

Query: 375 TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
            +K  A+ K     +     P  N + +Y + F E+L+  AE D  IV + A M     L
Sbjct: 296 AEKYHAVAKFNP-ITGKQVKPKLN-APSYTNVFAESLIQAAEVDDRIVAITAAMPSGTGL 353

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F E+FP+R FDVG+AEQHAVTF+AG+AC G+KPF  I S FLQR YDQVV+DV    L
Sbjct: 354 NKFAERFPKRSFDVGIAEQHAVTFAAGMACEGMKPFAAIYSTFLQRGYDQVVHDVMLHDL 413

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PVRF I  AGLVG+DGP   GAFD+T++ CLPN I+MAPSDE EL  M+ T  +IDD P 
Sbjct: 414 PVRFAIDRAGLVGADGPPHAGAFDLTYLGCLPNFIIMAPSDEAELKHMITTAVAIDDGPS 473

Query: 555 CFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGI 614
             RYPRG  V  +LP   G  ++IGKG+++ EG  VA+L  G  +Q  + A   L   GI
Sbjct: 474 AVRYPRGESVGVELPEI-GSVLQIGKGRIIREGTTVAILSLGTRLQEVVSAADALQARGI 532

Query: 615 DVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWR 674
             TVADARF KP+D +LV  L + H  LITVEE +IGGF + V H +A   LLD G+  R
Sbjct: 533 STTVADARFAKPIDGELVSRLAKEHAVLITVEENAIGGFATQVLHHLAQARLLDIGLVIR 592

Query: 675 PIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
            +VLPD  I+H S   Q   AGL    I  TAL  L
Sbjct: 593 LMVLPDRTIDHDSQIAQYKDAGLDAESILNTALYAL 628


>gi|77463823|ref|YP_353327.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacter sphaeroides
           2.4.1]
 gi|119368195|sp|Q3J1A8.1|DXS1_RHOS4 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase 1; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase 1; Short=DXP
           synthase 1; Short=DXPS 1
 gi|77388241|gb|ABA79426.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Rhodobacter sphaeroides
           2.4.1]
          Length = 648

 Score =  566 bits (1459), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 297/646 (45%), Positives = 409/646 (63%), Gaps = 30/646 (4%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V  P  +K+L+  EL++LA E+RSE+ S+V++T   L SSL  VELTVALH VF
Sbjct: 10  TPLLDRVCCPADMKALSDAELERLADEVRSEVISVVAETGGHLGSSLGVVELTVALHAVF 69

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P DK++WDVG Q Y HKILTGRR  + TLR+K G+SG+T RSES YDPF A H   S+
Sbjct: 70  NTPTDKLVWDVGHQCYPHKILTGRREQMRTLRQKGGLSGFTKRSESAYDPFGAAHSSTSI 129

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LG A+ R++       + VI +G+  AG AYEA+++AG+L+  + VILND+  S+ P
Sbjct: 130 SAALGFAMGRELGQPVGDTIAVIGDGSITAGMAYEALNHAGHLNKRLFVILNDNDMSIAP 189

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                    + AL+  L  + S   F  LR  A G+   +   + + A +  +   GM  
Sbjct: 190 P--------VGALARYLVNLSSKAPFATLRAAADGLEASLPGPLRDGARRARQLVTGM-- 239

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR-------- 370
           P G TLFEELG  Y+GP+DGH++E L+  L+  A   + GPVL+HVVT++ +        
Sbjct: 240 PGGGTLFEELGFTYVGPIDGHDMEALLQTLR-AARARTTGPVLIHVVTKKGKGYAPAENA 298

Query: 371 --RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGM 428
             +     K + +  +Q+  S +N+    NY++ +     E    EA +D  IV + A M
Sbjct: 299 PDKYHGVNKFDPVTGEQK-KSVANAP---NYTKVFGSTLTE----EAARDPRIVAITAAM 350

Query: 429 EMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVND 488
                + + Q++FP R FDVG+AEQHAVTF+AGLA  G+KPFC I S+FLQR YDQ+ +D
Sbjct: 351 PSGTGVDIMQKRFPNRVFDVGIAEQHAVTFAAGLAGAGMKPFCAIYSSFLQRGYDQIAHD 410

Query: 489 VDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVAS 548
           V  Q LPVRFVI  AGLVG+DG T  GAFD+ F++ LPNM VMA +DE EL+ M+AT  +
Sbjct: 411 VALQNLPVRFVIDRAGLVGADGATHAGAFDVGFITSLPNMTVMAAADEAELIHMIATAVA 470

Query: 549 IDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARAL 608
            D+ P+ FR+PRG  V  ++P  RG  +E G+G+V+ EG DVA+L +GA +   L+A  L
Sbjct: 471 FDEGPIAFRFPRGEGVGVEMP-ERGTVLEPGRGRVVREGTDVAILSFGAHLHEALQAAKL 529

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLD 668
           L   G+ VTVADARF +PLD  L+ +L ++H  L+TVE+G++GGFG+HV H++A  G  D
Sbjct: 530 LEAEGVSVTVADARFSRPLDTGLIDQLVRHHAALVTVEQGAMGGFGAHVMHYLANSGGFD 589

Query: 669 SGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTR 714
            G+  R + LPD +IE ASP    A AGL    IAATA   L R R
Sbjct: 590 GGLALRVMTLPDRFIEQASPEDMYADAGLRAEDIAATARGALARGR 635


>gi|56552494|ref|YP_163333.1| 1-deoxy-D-xylulose-5-phosphate synthase [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|56544068|gb|AAV90222.1| deoxyxylulose-5-phosphate synthase [Zymomonas mobilis subsp.
           mobilis ZM4]
          Length = 660

 Score =  566 bits (1458), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 305/650 (46%), Positives = 401/650 (61%), Gaps = 19/650 (2%)

Query: 68  DIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAA 127
           D    F +K+ TP+LD ++ P  L+ L    L+QLA E+R E  S V  T   L S L  
Sbjct: 7   DFRPMFPNKK-TPLLDKIKTPAELRQLDRNSLRQLADELRKETISAVGVTGGHLGSGLGV 65

Query: 128 VELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYD 187
           +ELTVALH+VF+ P D ++WDVG QTY HKILTGRR  I TLR++DG+SG+T R+ESEYD
Sbjct: 66  IELTVALHYVFNTPKDALVWDVGHQTYPHKILTGRRDRIRTLRQRDGLSGFTQRAESEYD 125

Query: 188 PFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIV 247
            F A H   S+SA LG A+A  +    +  V +I +G+  AG AYEAM+NA      +IV
Sbjct: 126 AFGAAHSSTSISAALGFAMASKLSDSDDKAVAIIGDGSMTAGMAYEAMNNAKAAGKRLIV 185

Query: 248 ILNDSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAA 307
           ILND+  S+ P         + ALSS LSR+ SS+ F  LR++ +G+  R+ +G+   A 
Sbjct: 186 ILNDNEMSISP--------PVGALSSYLSRLISSRPFMNLRDIMRGVVNRMPKGLATAAR 237

Query: 308 KVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTE 367
           K DEYARGM    G T FEELG YY+GPVDGHN++ LI VL+ V      GP+LVHVVT 
Sbjct: 238 KADEYARGMA--TGGTFFEELGFYYVGPVDGHNLDQLIPVLENVRDAKD-GPILVHVVTR 294

Query: 368 ENR---RAEDTQ-KSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVV 423
           + +    AE  + K  A+++    +      P G  S  Y   F E L+ EA++D  IV 
Sbjct: 295 KGQGYAPAEAAKDKYHAVQRLDVVSGKQAKAPPGPPS--YTSVFSEQLIKEAKQDDKIVT 352

Query: 424 VHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYD 483
           + A M     L  FQ+ FPER FDVG+AEQHAVTF+AGLA  G KPFC + S FLQR YD
Sbjct: 353 ITAAMPTGTGLDRFQQYFPERMFDVGIAEQHAVTFAAGLAAAGYKPFCCLYSTFLQRGYD 412

Query: 484 QVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMV 543
           Q+V+DV  Q LPVRF +  AGLVG+DG T  G+FD+ FM  LPNM+VMAPSDE EL +MV
Sbjct: 413 QLVHDVAIQNLPVRFAVDRAGLVGADGATHAGSFDLAFMVNLPNMVVMAPSDERELANMV 472

Query: 544 ATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCL 603
            ++A  D  P+  RYPRG  V   L G + I + IGKG+++  GK VA+L  G  ++  L
Sbjct: 473 HSMAHYDQGPISVRYPRGNGVGVSLEGEKEI-LPIGKGRLIRRGKKVAILSLGTRLEESL 531

Query: 604 KARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIAL 663
           KA   L   G+  +VAD RF KPLD  L R+L ++H  +IT+EEG++GGF + V    + 
Sbjct: 532 KAADRLDAQGLSTSVADMRFAKPLDEALTRQLLKSHQVIITIEEGALGGFATQVLTMASD 591

Query: 664 DGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRT 713
           +GL+D G+K R + LPD +       +Q A AGL    I A   + L R 
Sbjct: 592 EGLMDDGLKIRTLRLPDRFQPQDKQERQYAEAGLDADGIVAAVTAALQRN 641


>gi|338708492|ref|YP_004662693.1| deoxyxylulose-5-phosphate synthase [Zymomonas mobilis subsp.
           pomaceae ATCC 29192]
 gi|336295296|gb|AEI38403.1| deoxyxylulose-5-phosphate synthase [Zymomonas mobilis subsp.
           pomaceae ATCC 29192]
          Length = 650

 Score =  566 bits (1458), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 307/654 (46%), Positives = 399/654 (61%), Gaps = 22/654 (3%)

Query: 73  FWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTV 132
            +  + TP+LD ++ P  L+ L   EL+QLA E+R E  S V  T   L S L  +ELT+
Sbjct: 1   MFPNKKTPLLDTIKTPSDLRHLERMELRQLADELRKETISAVGVTGGHLGSGLGVIELTI 60

Query: 133 ALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAG 192
           ALH+VF  P D ++WDVG QTY HKILTGRR  I TLR++DG+SG+T R+ESEYD F A 
Sbjct: 61  ALHYVFDTPKDALVWDVGHQTYPHKILTGRRDRIRTLRQRDGLSGFTQRAESEYDAFGAA 120

Query: 193 HGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDS 252
           H   S+SA LG A+A  +  K++  V +I +G+  AG AYEAM+NA      +IVILND+
Sbjct: 121 HSSTSISAALGFAMASKLSHKKDKAVAIIGDGSMTAGMAYEAMNNAKAAGERLIVILNDN 180

Query: 253 RHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEY 312
             S+ P         + ALSS LSR+ SS+ F  LR++ +G+  R+ +G+   A K DEY
Sbjct: 181 EMSISP--------PVGALSSYLSRLISSRPFMNLRDIMRGVVNRMPKGLAIAARKADEY 232

Query: 313 ARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR-- 370
           ARGM    G TLFEELG YY+GPVDGHN++ LI VL+ V      GP+LVHVVT + +  
Sbjct: 233 ARGMA--TGGTLFEELGFYYVGPVDGHNLDQLIPVLENVRD-AKDGPILVHVVTRKGQGY 289

Query: 371 ----RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHA 426
                AED  K  A+++    +      P G  S  Y   F E L+ EA+ D  IV + A
Sbjct: 290 APAEAAED--KYHAVQRLDVVSGKQAKAPPGPPS--YTSVFAERLIKEAQADDKIVAITA 345

Query: 427 GMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVV 486
            M     L  FQ+ FPER FDVG+AEQHAVTF+AGLA    KPFC + S FLQR YDQ+V
Sbjct: 346 AMPTGTGLDRFQQYFPERMFDVGIAEQHAVTFAAGLAAAHYKPFCCLYSTFLQRGYDQLV 405

Query: 487 NDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATV 546
           +DV  Q LPVRF +  AGLVG+DG T  G+FD+ FM  LPNM+VMAPSDE EL  MV T+
Sbjct: 406 HDVAIQNLPVRFAVDRAGLVGADGATHAGSFDLAFMVNLPNMVVMAPSDEAELSSMVHTM 465

Query: 547 ASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
           A  D  P+  RYPRG  +   LP      + IGKG++L  GK VA+L  G  ++  LKA 
Sbjct: 466 AQYDKGPISVRYPRGNGIGVTLP-ENPETLTIGKGRLLRRGKTVAILSLGTRLEESLKAA 524

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGL 666
             L   G+  +VAD RF KPLD  L R L + H  ++TVEEG++GGF + V    + +GL
Sbjct: 525 DRLDAQGLSTSVADMRFAKPLDETLTRHLLKTHKVIVTVEEGALGGFATQVLTMASDEGL 584

Query: 667 LDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLLM 720
           +D G+K R + LPD +     P  Q A AGL    I A  +S L R  + + L+
Sbjct: 585 MDEGLKIRTLRLPDRFQPQDKPEIQYAEAGLDADGIVAAVISALHRNAKPVELV 638


>gi|335032694|ref|ZP_08526069.1| 1-deoxy-D-xylulose-5-phosphate synthase [Agrobacterium sp. ATCC
           31749]
 gi|333795869|gb|EGL67191.1| 1-deoxy-D-xylulose-5-phosphate synthase [Agrobacterium sp. ATCC
           31749]
          Length = 636

 Score =  566 bits (1458), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 298/639 (46%), Positives = 405/639 (63%), Gaps = 20/639 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V  P  LK +  ++L +LA E+R E+   VSKT   L + L  VELT+A+H VF
Sbjct: 4   TPLLDRVNFPSDLKEIDDRDLPELARELRDEMIDAVSKTGGHLGAGLGVVELTIAIHKVF 63

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D++++DVG Q Y HKILTGRR  I TLR++DG+SG+T R+ESEYD F AGH   S+
Sbjct: 64  NTPEDRLIFDVGHQCYPHKILTGRRDRIRTLRQEDGLSGFTRRAESEYDDFGAGHSSTSI 123

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVA  + G    ++ VI +G+  AG A+EA++NAG LD+ +IVILND+  S+ P
Sbjct: 124 SAGLGMAVAAGLDGSDRKVIAVIGDGSMSAGMAFEALNNAGALDARLIVILNDNDMSIAP 183

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S+ L+R+ S +++   R+  K +T  +G+ +     +   +ARG + 
Sbjct: 184 --------PTGAMSAYLARLASGRTYMGFRDFGKKLTAYLGKTIDRAITRAVTHARGYV- 234

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G TLFEELG Y+IGP+DGH+ + L+ VL+ V      GPVL+HVVT++ +       +
Sbjct: 235 -TGGTLFEELGFYHIGPIDGHSFDHLLPVLRNVRD-NQKGPVLIHVVTQKGK---GYAPA 289

Query: 379 EAIEKQQEGASDSNSLPFGNY-----SRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
           EA   +  G +  + +          + +Y   F EAL+ EA  D+ I+ V A M     
Sbjct: 290 EAAADKYHGVNKFDVITGAQAKAKPNAPSYTSVFAEALIQEATLDEKIIGVTAAMPNGTG 349

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L    E FP R FDVG+AEQHAVTF+AGLA  G KPFC + S FLQR YDQ+V+DV  Q 
Sbjct: 350 LDKMAELFPARTFDVGIAEQHAVTFAAGLAADGYKPFCALYSTFLQRGYDQLVHDVAIQS 409

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPVRF I  AG VG+DGPT  G+FD TF++ LP M+VMA +DE EL  MV T A+ D+ P
Sbjct: 410 LPVRFPIDRAGFVGADGPTHAGSFDTTFLATLPGMVVMAAADEAELKHMVRTAAAYDEGP 469

Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
           + FRYPRG  V  ++P  RG  ++IGKG+++ EG  VALL +G  +  CL A   L   G
Sbjct: 470 ISFRYPRGEGVGVEMPA-RGEILQIGKGRIIKEGTKVALLSFGTRLAECLAAAEDLDAAG 528

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKW 673
           +  TVADARF KPLD+ L+R+L  +H  L+T+EEGS+GGFG+HV HF+A  GLLD G K 
Sbjct: 529 LSTTVADARFAKPLDLDLIRQLAAHHEVLVTIEEGSVGGFGAHVLHFMASAGLLDHGPKV 588

Query: 674 RPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
           R + LPD ++E A P    A AGL    I +T  + LG+
Sbjct: 589 RTLTLPDQWVEQAKPETMYANAGLDRAGIVSTVFNALGQ 627


>gi|339505498|ref|YP_004692918.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseobacter litoralis Och
           149]
 gi|338759491|gb|AEI95955.1| 1-deoxy-D-xylulose-5-phosphate synthase Dxs [Roseobacter litoralis
           Och 149]
          Length = 642

 Score =  566 bits (1458), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 304/651 (46%), Positives = 401/651 (61%), Gaps = 34/651 (5%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           D   TP+LDLV  P  +K L+ ++L QLA E+R E  S VS T   L + L  VELTVAL
Sbjct: 3   DTPKTPLLDLVHRPADMKGLSDRQLVQLADELRRETVSAVSVTGGHLGAGLGVVELTVAL 62

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H VF  P DKI+WDVG Q Y HKILTGRR  I TLR K G+SG+T RSES YDPF A H 
Sbjct: 63  HAVFDTPRDKIIWDVGHQCYPHKILTGRRDRIRTLRMKGGLSGFTKRSESPYDPFGAAHS 122

Query: 195 CNSVSAGLGMAVARDIKG----KRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
             S+SA LG AVARD+ G         + VI +G+  AG AYEAM+NAG+L   MIVILN
Sbjct: 123 STSISAALGFAVARDLGGVVPEGLGDAIAVIGDGSMSAGMAYEAMNNAGHLKKRMIVILN 182

Query: 251 DSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVD 310
           D+  S+ P           A+SS LSR+ S + F+  +  AKG    +     E A +  
Sbjct: 183 DNEMSIAP--------PTGAMSSYLSRLYSGEPFQDFKAAAKGAVSLLPEPFREGAKRAK 234

Query: 311 EYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR 370
           +  +GM    G TLFEELG  YIGP+DGH+++ L+ +L+ V +  + GP+++H +T++ +
Sbjct: 235 DMLKGMA--VGGTLFEELGFSYIGPIDGHDLDQLLPLLRTVKARAT-GPIMIHALTKKGK 291

Query: 371 ----------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKD 420
                     +   T K + +  QQ  A  +        + +Y   F ++L+ EA KD  
Sbjct: 292 GYAPAETARDKGHATAKFDVLTGQQTKAPSN--------APSYTKVFAQSLLEEAMKDDK 343

Query: 421 IVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQR 480
           I  V A M     L LF E++P R FDVG+AEQH VTFSA LA GG+KPFC + S FLQR
Sbjct: 344 ICAVTAAMPDGTGLNLFAERYPSRCFDVGIAEQHGVTFSAALAAGGMKPFCAMYSTFLQR 403

Query: 481 AYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELV 540
            YDQVV+DV  QRLPVRF I  AGLVG+DG T  G+FDI +++ LP  +VMA +DE EL 
Sbjct: 404 GYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGSFDIAYLANLPGFVVMAAADEAELK 463

Query: 541 DMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQ 600
            MVAT  + DD P+ FR+PRG     D+P   G  +EIGKG+++ EG  VA+L +G  + 
Sbjct: 464 HMVATAVAHDDGPIAFRFPRGEGNGVDMPEV-GEVLEIGKGRIITEGARVAILSFGTRLA 522

Query: 601 NCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHF 660
              KA   L+  GI  T+ADARF KPLD  ++ +L  NH  LITVEEG+IGGFGSHV+  
Sbjct: 523 EVQKAGEALAARGITPTIADARFAKPLDRDMILDLAVNHEALITVEEGAIGGFGSHVAQL 582

Query: 661 IALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
           ++ +G+ D+G K+R +VLPD +I+ +SP    A+AG+    I    LS+LG
Sbjct: 583 LSDEGVFDTGFKFRSMVLPDIFIDQSSPADMYAVAGMNAADIETKVLSVLG 633


>gi|424888383|ref|ZP_18311986.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium leguminosarum
           bv. trifolii WSM2012]
 gi|393173932|gb|EJC73976.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium leguminosarum
           bv. trifolii WSM2012]
          Length = 638

 Score =  565 bits (1457), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 300/640 (46%), Positives = 404/640 (63%), Gaps = 22/640 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V  P  L+ L  ++L QLA E+R E+   VS+T   L + L  VELT+A+H VF
Sbjct: 7   TPLLDQVTYPADLRKLEDRDLPQLAREVRDEMIDAVSRTGGHLGAGLGVVELTIAIHSVF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D++++DVG Q Y HKILTGRR  I TLR++DG+SG+T R+ESEYDPF A H   S+
Sbjct: 67  DTPDDRLIFDVGHQCYPHKILTGRRDRIRTLRQEDGLSGFTRRAESEYDPFGAAHSSTSI 126

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMA+A D+      ++ VI +G   AG AYEA++NAG LD+ +IVILND+  S+ P
Sbjct: 127 SAGLGMAIAADLDKSDRRVIAVIGDGAMSAGMAYEALNNAGALDARLIVILNDNDMSIAP 186

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S+ L+R+ S +++   R+  K +T  +G+ +     +  E+ARG + 
Sbjct: 187 --------PTGAMSAYLARLASGRTYMGFRDFGKKLTAYLGKNIDRAITRAVEHARGYV- 237

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G T+FEE+G Y+IGP+DGH+ + L+ VL+ V   G  GPVL+HVVT++ +       +
Sbjct: 238 -TGGTMFEEMGFYHIGPIDGHSFDHLLPVLRNVRDNGR-GPVLIHVVTQKGK---GYPPA 292

Query: 379 EAIEKQQEGASDSNSLPFGNYSR------TYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
           EA   +  G +  + +  G  +R      +Y   F EALV EA  D  IV + A M    
Sbjct: 293 EAAADKYHGVNKFDVIT-GAQARVKPNAPSYTSVFAEALVQEATLDDKIVGITAAMPNGT 351

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            L    E FP R FDVG+AEQHAVTF+AGLA  G KPF  + S FLQRAYDQVV+DV  Q
Sbjct: 352 GLDKLAEAFPSRCFDVGIAEQHAVTFAAGLAAEGYKPFAALYSTFLQRAYDQVVHDVAIQ 411

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
            LPVRF I  AG VG+DGPT  G+FD  F++ LP  +VMA +DE EL  MV T  + D  
Sbjct: 412 GLPVRFPIDRAGFVGADGPTHAGSFDTAFLTTLPGFVVMAAADEAELKHMVRTAVAYDGG 471

Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
           P+ FRYPRG  V  D+P  RG  ++IGKG+++ EG  VALL +G  + +CL A   L   
Sbjct: 472 PISFRYPRGEGVGVDMPA-RGEILQIGKGRIVKEGTKVALLSFGTRLADCLLAAEDLDAA 530

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 672
           G+  TVADARF KPLD  L+R+L ++H  LITVEEGS+GGFGS V  +++ +GLLD+G+K
Sbjct: 531 GLSTTVADARFAKPLDHDLIRQLARHHEMLITVEEGSVGGFGSQVLQYLSSEGLLDNGLK 590

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
            R +V+PD ++E A P    A AGL    I +T    LGR
Sbjct: 591 IRSLVMPDIWMEQAKPEAMNAHAGLDRAGIVSTVFKALGR 630


>gi|332559608|ref|ZP_08413930.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacter sphaeroides
           WS8N]
 gi|332277320|gb|EGJ22635.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacter sphaeroides
           WS8N]
          Length = 637

 Score =  565 bits (1457), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 304/643 (47%), Positives = 404/643 (62%), Gaps = 22/643 (3%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           D+  TP LD V  P+ +K LT +EL+ LA E+R+E  S VS T   L + L  VELTVAL
Sbjct: 3   DRPCTPTLDRVTLPVDMKGLTDRELRSLADELRAETISAVSVTGGHLGAGLGVVELTVAL 62

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H VF AP DKI+WDVG Q Y HKILTGRR  I TLR+  G+SG+T RSES YD F AGH 
Sbjct: 63  HAVFDAPRDKIIWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTKRSESPYDCFGAGHS 122

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA +G A AR++ G     V VI +G+  AG A+EA+++ G+L + +IVILND+  
Sbjct: 123 STSISAAVGFAAAREMGGDTGDAVAVIGDGSMSAGMAFEALNHGGHLKNRVIVILNDNEM 182

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+ P +         ALSS LSR+ +   F+  +  AKG    +     E A +  E  +
Sbjct: 183 SIAPPV--------GALSSYLSRLYAGAPFQDFKAAAKGALGLLPEPFQEGARRAKEMLK 234

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAED 374
            +    G TLFEELG  Y+GP+DGH+++ L+ VL+ V    +  PVL+HV+T++ R    
Sbjct: 235 SVT--VGGTLFEELGFSYVGPIDGHDLDQLLPVLRTVKQR-AHAPVLIHVITKKGR---G 288

Query: 375 TQKSEAIEKQQEGASDSNSL------PFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGM 428
              +EA   +    +  N L      P  N + +Y   F ++L+ EAE D+ I  V A M
Sbjct: 289 YAPAEAARDRGHATNKFNVLTGAQVKPVSN-APSYTKVFAQSLIKEAEVDERICAVTAAM 347

Query: 429 EMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVND 488
                L LF E+FP+R FDVG+AEQHAVTFSA LA GG++PFC I S FLQR YDQ+V+D
Sbjct: 348 PDGTGLNLFGERFPKRTFDVGIAEQHAVTFSAALAAGGMRPFCAIYSTFLQRGYDQIVHD 407

Query: 489 VDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVAS 548
           V  QRLPVRF I  AGLVG+DG T  G+FD+ F+S LP ++VMA +DE ELV MVAT A+
Sbjct: 408 VAIQRLPVRFAIDRAGLVGADGATHAGSFDVAFLSNLPGIVVMAAADEAELVHMVATAAA 467

Query: 549 IDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARAL 608
            D+ P+ FRYPRG  V  ++P  +G+P++IG+G+V+ EG  +ALL +G  +     A   
Sbjct: 468 HDEGPIAFRYPRGDGVGVEMP-VKGVPLQIGRGRVVNEGTRIALLSFGTRLAEVQVAAEA 526

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLD 668
           L+  GI  TVADARF KPLD  L+ +L  +H  LIT+EEG+IGGFGSHV+  +A  G+ D
Sbjct: 527 LAARGISPTVADARFAKPLDRDLILQLAAHHEALITIEEGAIGGFGSHVAQLLAEAGVFD 586

Query: 669 SGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
            G ++R +VLPD +I+H S     A AGL    I   AL  LG
Sbjct: 587 RGFRYRSMVLPDTFIDHNSAEVMYATAGLNAADIERKALETLG 629


>gi|221640629|ref|YP_002526891.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacter sphaeroides
           KD131]
 gi|221161410|gb|ACM02390.1| 1-deoxy-D-xylulose-5-phosphate synthase 2 [Rhodobacter sphaeroides
           KD131]
          Length = 637

 Score =  565 bits (1457), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 304/643 (47%), Positives = 404/643 (62%), Gaps = 22/643 (3%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           D+  TP LD V  P+ +K LT +EL+ LA E+R+E  S VS T   L + L  VELTVAL
Sbjct: 3   DRPCTPTLDRVTLPVDMKGLTDRELRSLADELRAETISAVSVTGGHLGAGLGVVELTVAL 62

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H VF AP DKI+WDVG Q Y HKILTGRR  I TLR+  G+SG+T RSES YD F AGH 
Sbjct: 63  HAVFDAPRDKIIWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTKRSESPYDCFGAGHS 122

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA +G A AR++ G     V VI +G+  AG A+EA+++ G+L + +IVILND+  
Sbjct: 123 STSISAAVGFAAAREMGGDTGDAVAVIGDGSMSAGMAFEALNHGGHLKNRVIVILNDNEM 182

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+ P +         ALSS LSR+ +   F+  +  AKG    +     E A +  E  +
Sbjct: 183 SIAPPV--------GALSSYLSRLYAGAPFQDFKAAAKGALGLLPEPFQEGARRAKEMLK 234

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAED 374
            +    G TLFEELG  Y+GP+DGH+++ L+ VL+ V    +  PVL+HV+T++ R    
Sbjct: 235 SVT--VGGTLFEELGFSYVGPIDGHDLDQLLPVLRTVKQR-AHAPVLIHVITKKGR---G 288

Query: 375 TQKSEAIEKQQEGASDSNSL------PFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGM 428
              +EA   +    +  N L      P  N + +Y   F ++L+ EAE D+ I  V A M
Sbjct: 289 YAPAEAARDRGHATNKFNVLTGAQVKPVSN-APSYTKVFAQSLIKEAEVDERICAVTAAM 347

Query: 429 EMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVND 488
                L LF E+FP+R FDVG+AEQHAVTFSA LA GG++PFC I S FLQR YDQ+V+D
Sbjct: 348 PDGTGLNLFGERFPKRTFDVGIAEQHAVTFSAALAAGGMRPFCAIYSTFLQRGYDQIVHD 407

Query: 489 VDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVAS 548
           V  QRLPVRF I  AGLVG+DG T  G+FD+ F+S LP ++VMA +DE ELV MVAT A+
Sbjct: 408 VAIQRLPVRFAIDRAGLVGADGATHAGSFDVAFLSNLPGIVVMAAADEAELVHMVATAAA 467

Query: 549 IDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARAL 608
            D+ P+ FRYPRG  V  ++P  +G+P++IG+G+V+ EG  +ALL +G  +     A   
Sbjct: 468 HDEGPIAFRYPRGDGVGVEMP-VKGVPLQIGRGRVVREGTRIALLSFGTRLAEVQVAAEA 526

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLD 668
           L+  GI  TVADARF KPLD  L+ +L  +H  LIT+EEG+IGGFGSHV+  +A  G+ D
Sbjct: 527 LAARGISPTVADARFAKPLDRDLILQLAAHHEALITIEEGAIGGFGSHVAQLLAEAGVFD 586

Query: 669 SGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
            G ++R +VLPD +I+H S     A AGL    I   AL  LG
Sbjct: 587 RGFRYRSMVLPDTFIDHNSAEVMYATAGLNAADIERKALETLG 629


>gi|332558698|ref|ZP_08413020.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacter sphaeroides
           WS8N]
 gi|332276410|gb|EGJ21725.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacter sphaeroides
           WS8N]
          Length = 648

 Score =  565 bits (1457), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 297/646 (45%), Positives = 409/646 (63%), Gaps = 30/646 (4%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V  P  +K+L+  EL++LA E+RSE+ S+V++T   L SSL  VELTVALH VF
Sbjct: 10  TPLLDRVCCPADMKALSDAELERLADEVRSEVISVVAETGGHLGSSLGVVELTVALHAVF 69

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P DK++WDVG Q Y HKILTGRR  + TLR+K G+SG+T RSES YDPF A H   S+
Sbjct: 70  NTPTDKLVWDVGHQCYPHKILTGRREQMRTLRQKGGLSGFTKRSESAYDPFGAAHSSTSI 129

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LG A+ R++       + VI +G+  AG AYEA+++AG+L+  + VILND+  S+ P
Sbjct: 130 SAALGFAMGRELGQPVGDTIAVIGDGSITAGMAYEALNHAGHLNKRLFVILNDNDMSIAP 189

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                    + AL+  L  + S   F  LR  A G+   +   + + A +  +   GM  
Sbjct: 190 P--------VGALARYLVNLSSKAPFATLRAAADGLEASLPGPLRDGARRARQLVTGM-- 239

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR-------- 370
           P G TLFEELG  Y+GP+DGH++E L+  L+  A   + GPVL+HVVT++ +        
Sbjct: 240 PGGGTLFEELGFTYVGPIDGHDMEALLQTLR-AARARTTGPVLIHVVTKKGKGYAPAENA 298

Query: 371 --RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGM 428
             +     K + +  +Q+  S +N+    NY++ +     E    EA +D  IV + A M
Sbjct: 299 PDKYHGVNKFDPVTGEQK-KSVANAP---NYTKVFGSTLTE----EAARDPRIVAITAAM 350

Query: 429 EMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVND 488
                + + Q++FP R FDVG+AEQHAVTF+AGLA  G+KPFC I S+FLQR YDQ+ +D
Sbjct: 351 PSGTGVDIMQKRFPNRVFDVGIAEQHAVTFAAGLAGAGMKPFCAIYSSFLQRGYDQIAHD 410

Query: 489 VDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVAS 548
           V  Q LPVRFVI  AGLVG+DG T  GAFD+ F++ LPNM VMA +DE EL+ M+AT  +
Sbjct: 411 VALQNLPVRFVIDRAGLVGADGATHAGAFDVGFLTSLPNMTVMAAADEAELIHMIATAVA 470

Query: 549 IDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARAL 608
            D+ P+ FR+PRG  V  ++P  RG  +E G+G+V+ EG DVA+L +GA +   L+A  L
Sbjct: 471 FDEGPIAFRFPRGEGVGVEMP-ERGTVLEPGRGRVVREGTDVAILSFGAHLHEALQAAKL 529

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLD 668
           L   G+ VTVADARF +PLD  L+ +L ++H  L+TVE+G++GGFG+HV H++A  G  D
Sbjct: 530 LEAEGVSVTVADARFSRPLDTGLIDQLVRHHAALVTVEQGAMGGFGAHVMHYLANSGGFD 589

Query: 669 SGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTR 714
            G+  R + LPD +IE ASP    A AGL    IAATA   L R R
Sbjct: 590 GGLALRVMTLPDRFIEQASPEDMYADAGLRAEDIAATARGALVRGR 635


>gi|254462269|ref|ZP_05075685.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacterales bacterium
           HTCC2083]
 gi|206678858|gb|EDZ43345.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 642

 Score =  565 bits (1457), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 303/651 (46%), Positives = 408/651 (62%), Gaps = 34/651 (5%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           D+  TP+LD V+ P  L   +  EL ++A E+RSE  S VS+T   L + L  VELTVAL
Sbjct: 3   DRPNTPLLDRVQRPADLGQFSDAELTRVAQELRSETISAVSETGGHLGAGLGVVELTVAL 62

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H VF+ P DKI+WDVG Q Y HKILT RR  I TLR KDG+SG+T RSES YDPF A H 
Sbjct: 63  HSVFNTPKDKIIWDVGHQCYPHKILTERRERIRTLRMKDGLSGFTKRSESVYDPFGAAHS 122

Query: 195 CNSVSAGLGMAVARDIKGKREC----IVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
             S+SA LG AVARD+ G+        + VI +G+  AG A+EAM+NAG+L   M VILN
Sbjct: 123 STSISAALGFAVARDLGGEAPGGLGDAIAVIGDGSISAGMAFEAMNNAGHLKKRMFVILN 182

Query: 251 DSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVD 310
           D+  S+ P         + ALSS LSR+ + + F+ L+  AKG    +     E A +  
Sbjct: 183 DNEMSIAP--------PVGALSSYLSRLYAEEPFQDLKTAAKGAVSLLPEPFREGAKRAK 234

Query: 311 EYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR 370
           +  +GM    G TLFE+LG  Y+GP+DGH+++ L+ VL+ V +  + GPVL+HV+T++ +
Sbjct: 235 DMLKGMT--VGGTLFEQLGFSYLGPIDGHDMDQLLPVLRTVQTRAT-GPVLIHVITKKGK 291

Query: 371 ----------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKD 420
                     +   T K + +  +Q+  S SN+        +Y   F E+L+ EA  D  
Sbjct: 292 GYAPAEAARDKGHATAKFDVLTGEQK-KSPSNA-------PSYTKVFAESLLKEAAADDK 343

Query: 421 IVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQR 480
           I  V A M     L  F E++P R FDV +AEQH VTFSA LA GG+KPFC + S FLQR
Sbjct: 344 ICAVTAAMPDGTGLNQFAERYPSRCFDVAIAEQHGVTFSAALAAGGMKPFCTMYSTFLQR 403

Query: 481 AYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELV 540
            YDQVV+DV  QRLPVRF I  AGLVG+DG T  GAFD  ++S LP   VMA +DE ELV
Sbjct: 404 GYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGAFDTAYLSNLPGFTVMAAADEAELV 463

Query: 541 DMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQ 600
            MVAT  + D+ P+ FR+PRG  V  ++P  +GIP+EIGKG+++ EGK VA+L +G  ++
Sbjct: 464 HMVATAVAHDEGPIAFRFPRGEGVGVEIP-EKGIPLEIGKGRIIREGKGVAILSFGTRLK 522

Query: 601 NCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHF 660
               A   L+  GI  ++A+ARF KPLD  L+ +L Q+H  LIT+EEG++GGFGSHV+  
Sbjct: 523 EVEDACDALAAKGITPSIANARFAKPLDRDLILQLAQDHESLITIEEGAVGGFGSHVAQL 582

Query: 661 IALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
           +A +G+ D+G+K+R +VLPD +I+ +SP    A+A L    I A  L  LG
Sbjct: 583 LAEEGVFDTGLKYRSMVLPDIFIDQSSPRDMYAVAKLNAEDIEAKVLDTLG 633


>gi|338707067|ref|YP_004661268.1| deoxyxylulose-5-phosphate synthase [Zymomonas mobilis subsp.
           pomaceae ATCC 29192]
 gi|336293871|gb|AEI36978.1| deoxyxylulose-5-phosphate synthase [Zymomonas mobilis subsp.
           pomaceae ATCC 29192]
          Length = 649

 Score =  565 bits (1457), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 307/654 (46%), Positives = 398/654 (60%), Gaps = 22/654 (3%)

Query: 73  FWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTV 132
            +    TP+LD ++ P  L+ L   EL+QLA E+R E  S V  T   L S L  +ELT+
Sbjct: 1   MFPNNKTPLLDTIKTPSDLRHLERMELRQLADELRKETISAVGVTGGHLGSGLGVIELTI 60

Query: 133 ALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAG 192
           ALH+VF  P D ++WDVG QTY HKILTGRR  I TLR++DG+SG+T R+ESEYD F A 
Sbjct: 61  ALHYVFDTPKDALVWDVGHQTYPHKILTGRRDRIRTLRQRDGLSGFTQRAESEYDAFGAA 120

Query: 193 HGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDS 252
           H   S+SA LG A+A  +  K++  V +I +G+  AG AYEAM+NA      +IVILND+
Sbjct: 121 HSSTSISAALGFAMASKLSHKKDKAVAIIGDGSMTAGMAYEAMNNAKAAGERLIVILNDN 180

Query: 253 RHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEY 312
             S+ P         + ALSS LSR+ SS+ F  LR++ +G+  R+ +G+   A K DEY
Sbjct: 181 EMSISP--------PVGALSSYLSRLISSRPFMNLRDIMRGVVNRMPKGLAIAARKADEY 232

Query: 313 ARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR-- 370
           ARGM    G TLFEELG YY+GPVDGHN++ LI VL+ V      GP+LVHVVT + +  
Sbjct: 233 ARGMA--TGGTLFEELGFYYVGPVDGHNLDQLIPVLENVRD-AKDGPILVHVVTRKGQGY 289

Query: 371 ----RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHA 426
                AED  K  A+++    +      P G  S  Y   F E L+ EA+ D  IV + A
Sbjct: 290 APAEAAED--KYHAVQRLDVVSGKQAKAPPGPPS--YTSVFAERLIKEAQADDKIVAITA 345

Query: 427 GMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVV 486
            M     L  FQ+ FPER FDVG+AEQHAVTF+AGLA    KPFC + S FLQR YDQ+V
Sbjct: 346 AMPTGTGLDRFQQYFPERMFDVGIAEQHAVTFAAGLAAAHYKPFCCLYSTFLQRGYDQLV 405

Query: 487 NDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATV 546
           +DV  Q LPVRF +  AGLVG+DG T  G+FD+ FM  LPNM+VMAPSDE EL  MV T+
Sbjct: 406 HDVAIQNLPVRFAVDRAGLVGADGATHAGSFDLAFMVNLPNMVVMAPSDEAELSSMVHTM 465

Query: 547 ASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
           A  D  P+  RYPRG  +   LP      + IGKG++L  GK VA+L  G  ++  LKA 
Sbjct: 466 AQYDKGPISVRYPRGNGIGVTLP-ENPETLTIGKGRLLRRGKTVAILSLGTRLEESLKAA 524

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGL 666
             L   G+  +VAD RF KPLD  L R L + H  ++TVEEG++GGF + V    + +GL
Sbjct: 525 DRLDAQGLSTSVADMRFAKPLDETLTRHLLKTHKVIVTVEEGALGGFATQVLTMASDEGL 584

Query: 667 LDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLLM 720
           +D G+K R + LPD +     P  Q A AGL    I A  +S L R  + + L+
Sbjct: 585 MDEGLKIRTLRLPDRFQPQDKPEIQYAEAGLDADGIVAAVISALHRNAKPVELV 638


>gi|126463555|ref|YP_001044669.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacter sphaeroides
           ATCC 17029]
 gi|126105219|gb|ABN77897.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Rhodobacter sphaeroides
           ATCC 17029]
          Length = 637

 Score =  565 bits (1457), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 304/643 (47%), Positives = 404/643 (62%), Gaps = 22/643 (3%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           D+  TP LD V  P+ +K LT +EL+ LA E+R+E  S VS T   L + L  VELTVAL
Sbjct: 3   DRPCTPTLDRVTLPVDMKGLTDRELRSLADELRAETISAVSVTGGHLGAGLGVVELTVAL 62

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H VF AP DKI+WDVG Q Y HKILTGRR  I TLR+  G+SG+T RSES YD F AGH 
Sbjct: 63  HAVFDAPRDKIIWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTKRSESPYDCFGAGHS 122

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA +G A AR++ G     V VI +G+  AG A+EA+++ G+L + +IVILND+  
Sbjct: 123 STSISAAVGFAAAREMGGDTGDAVAVIGDGSMSAGMAFEALNHGGHLKNRVIVILNDNEM 182

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+ P +         ALSS LSR+ +   F+  +  AKG    +     E A +  E  +
Sbjct: 183 SIAPPV--------GALSSYLSRLYAGAPFQDFKAAAKGALGLLPEPFQEGARRAKEMLK 234

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAED 374
            +    G TLFEELG  Y+GP+DGH+++ L+ VL+ V    +  PVL+HV+T++ R    
Sbjct: 235 SVT--VGGTLFEELGFSYVGPIDGHDLDQLLPVLRTVKQR-AHAPVLIHVITKKGR---G 288

Query: 375 TQKSEAIEKQQEGASDSNSL------PFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGM 428
              +EA   +    +  N L      P  N + +Y   F ++L+ EAE D+ I  V A M
Sbjct: 289 YAPAEAARDRGHATNKFNVLTGAQVKPVSN-APSYTKVFAQSLIKEAEVDERICAVTAAM 347

Query: 429 EMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVND 488
                L LF E+FP+R FDVG+AEQHAVTFSA LA GG++PFC I S FLQR YDQ+V+D
Sbjct: 348 PDGTGLNLFGERFPKRTFDVGIAEQHAVTFSAALAAGGMRPFCAIYSTFLQRGYDQIVHD 407

Query: 489 VDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVAS 548
           V  QRLPVRF I  AGLVG+DG T  G+FD+ F+S LP ++VMA +DE ELV MVAT A+
Sbjct: 408 VAIQRLPVRFAIDRAGLVGADGATHAGSFDVAFLSNLPGIVVMAAADEAELVHMVATAAA 467

Query: 549 IDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARAL 608
            D+ P+ FRYPRG  V  ++P  +G+P++IG+G+V+ EG  +ALL +G  +     A   
Sbjct: 468 HDEGPIAFRYPRGDGVGVEMPA-KGVPLQIGRGRVVREGTRIALLSFGTRLAEVQVAAEA 526

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLD 668
           L+  GI  TVADARF KPLD  L+ +L  +H  LIT+EEG+IGGFGSHV+  +A  G+ D
Sbjct: 527 LAARGISPTVADARFAKPLDRDLILQLAAHHEALITIEEGAIGGFGSHVAQLLAEAGVFD 586

Query: 669 SGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
            G ++R +VLPD +I+H S     A AGL    I   AL  LG
Sbjct: 587 RGFRYRSMVLPDTFIDHNSAEVMYATAGLNAADIERKALETLG 629


>gi|77464715|ref|YP_354219.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacter sphaeroides
           2.4.1]
 gi|119368196|sp|Q3IYR6.1|DXS2_RHOS4 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase 2; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase 2; Short=DXP
           synthase 2; Short=DXPS 2
 gi|77389133|gb|ABA80318.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Rhodobacter sphaeroides
           2.4.1]
          Length = 637

 Score =  565 bits (1456), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 303/643 (47%), Positives = 404/643 (62%), Gaps = 22/643 (3%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           D+  TP LD V  P+ +K LT +EL+ LA E+R+E  S VS T   L + L  VELTVAL
Sbjct: 3   DRPCTPTLDRVTLPVDIKGLTDRELRSLADELRAETISAVSVTGGHLGAGLGVVELTVAL 62

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H +F AP DKI+WDVG Q Y HKILTGRR  I TLR+  G+SG+T RSES YD F AGH 
Sbjct: 63  HAIFDAPRDKIIWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTKRSESPYDCFGAGHS 122

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA +G A AR++ G     V VI +G+  AG A+EA+++ G+L + +IVILND+  
Sbjct: 123 STSISAAVGFAAAREMGGDTGDAVAVIGDGSMSAGMAFEALNHGGHLKNRVIVILNDNEM 182

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+ P +         ALSS LSR+ +   F+  +  AKG    +     E A +  E  +
Sbjct: 183 SIAPPV--------GALSSYLSRLYAGAPFQDFKAAAKGALGLLPEPFQEGARRAKEMLK 234

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAED 374
            +    G TLFEELG  Y+GP+DGH+++ L+ VL+ V    +  PVL+HV+T++ R    
Sbjct: 235 SVT--VGGTLFEELGFSYVGPIDGHDLDQLLPVLRTVKQR-AHAPVLIHVITKKGR---G 288

Query: 375 TQKSEAIEKQQEGASDSNSL------PFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGM 428
              +EA   +    +  N L      P  N + +Y   F ++L+ EAE D+ I  V A M
Sbjct: 289 YAPAEAARDRGHATNKFNVLTGAQVKPVSN-APSYTKVFAQSLIKEAEVDERICAVTAAM 347

Query: 429 EMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVND 488
                L LF E+FP+R FDVG+AEQHAVTFSA LA GG++PFC I S FLQR YDQ+V+D
Sbjct: 348 PDGTGLNLFGERFPKRTFDVGIAEQHAVTFSAALAAGGMRPFCAIYSTFLQRGYDQIVHD 407

Query: 489 VDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVAS 548
           V  QRLPVRF I  AGLVG+DG T  G+FD+ F+S LP ++VMA +DE ELV MVAT A+
Sbjct: 408 VAIQRLPVRFAIDRAGLVGADGATHAGSFDVAFLSNLPGIVVMAAADEAELVHMVATAAA 467

Query: 549 IDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARAL 608
            D+ P+ FRYPRG  V  ++P  +G+P++IG+G+V+ EG  +ALL +G  +     A   
Sbjct: 468 HDEGPIAFRYPRGDGVGVEMP-VKGVPLQIGRGRVVSEGTRIALLSFGTRLAEVQVAAEA 526

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLD 668
           L+  GI  TVADARF KPLD  L+ +L  +H  LIT+EEG+IGGFGSHV+  +A  G+ D
Sbjct: 527 LAARGISPTVADARFAKPLDRDLILQLAAHHEALITIEEGAIGGFGSHVAQLLAEAGVFD 586

Query: 669 SGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
            G ++R +VLPD +I+H S     A AGL    I   AL  LG
Sbjct: 587 RGFRYRSMVLPDTFIDHNSAEVMYATAGLNAADIERKALETLG 629


>gi|254476395|ref|ZP_05089781.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ruegeria sp. R11]
 gi|214030638|gb|EEB71473.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ruegeria sp. R11]
          Length = 642

 Score =  565 bits (1456), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 303/651 (46%), Positives = 405/651 (62%), Gaps = 34/651 (5%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           D+  TP+LD +  P  LKSL+  +L Q+A E+R E  S VS T   L + L  VELT AL
Sbjct: 3   DRPQTPLLDQITRPADLKSLSDAQLTQVAQELRQETISAVSVTGGHLGAGLGVVELTTAL 62

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H VF  P DKI+WDV  Q Y HKILTGRR  I TLR KDG+SG+T RSES +DPF A H 
Sbjct: 63  HAVFDTPRDKIIWDVSHQCYPHKILTGRRDRIRTLRMKDGLSGFTKRSESPFDPFGAAHS 122

Query: 195 CNSVSAGLGMAVARDIKG----KRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
             S+SA LG AVARD+ G         + VI +G+  AG A+EAM+NAG+L   +IVILN
Sbjct: 123 STSISAALGFAVARDLGGVIPEGNGDAIAVIGDGSMSAGMAFEAMNNAGHLGKRLIVILN 182

Query: 251 DSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVD 310
           D+  S+ P         + ALSS LSR+ + + F++L+ VAKG    +     E A +  
Sbjct: 183 DNEMSIAP--------PVGALSSYLSRLYAEEPFQELKAVAKGAASLLPEPFREGAKRAK 234

Query: 311 EYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR 370
           +  +GM    G TLFE LG  Y+GP+DGH+++ L+ VL+ V +  + GP+L+HV+T++ +
Sbjct: 235 DMLKGMA--VGGTLFESLGFSYLGPIDGHDMDQLLPVLRTVKARAT-GPILIHVLTKKGK 291

Query: 371 ------RAED----TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKD 420
                 RA D    T K + +  +Q+ A  +        + +Y   F + LV  A +D  
Sbjct: 292 GYAPAERARDKGHATAKFDMVTGEQKKAPSN--------APSYTAVFGKELVRLAAEDDK 343

Query: 421 IVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQR 480
           I  V A M     L L  E++P R FDVG+AEQH VTF+A LA GG+KPFC + S FLQR
Sbjct: 344 ICAVTAAMPDGTGLNLMAERYPSRTFDVGIAEQHGVTFAAALAAGGMKPFCAMYSTFLQR 403

Query: 481 AYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELV 540
            YDQVV+DV  QRLPVRF I  AGLVG+DG T  G+FDI +M+ LP M+VMA +DE ELV
Sbjct: 404 GYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGSFDIAYMANLPGMVVMAAADEAELV 463

Query: 541 DMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQ 600
            M AT A+ DD P+ FRYPRG     D+P    + +EIGKG+++  GK VA+L +G  + 
Sbjct: 464 HMTATAAAYDDGPIAFRYPRGEGEGVDMPEVPEV-LEIGKGRMIQNGKRVAILSFGTRLG 522

Query: 601 NCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHF 660
              KA   LS  GI  T+ADARF KPLD  ++ +L  +H  LIT+EEG++GGFGSHV+  
Sbjct: 523 EVKKAAEALSAKGITPTIADARFAKPLDRDMILKLAADHEALITIEEGAVGGFGSHVAQL 582

Query: 661 IALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
           +A +G+ DSG+K+R +VLPD +I+ ASP     +A +    I A  L +LG
Sbjct: 583 LAEEGVFDSGLKFRSMVLPDTFIDQASPADMYEIAAMNAPQIEAKVLEVLG 633


>gi|254438285|ref|ZP_05051779.1| 1-deoxy-D-xylulose-5-phosphate synthase [Octadecabacter antarcticus
           307]
 gi|198253731|gb|EDY78045.1| 1-deoxy-D-xylulose-5-phosphate synthase [Octadecabacter antarcticus
           307]
          Length = 630

 Score =  565 bits (1456), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 302/641 (47%), Positives = 405/641 (63%), Gaps = 28/641 (4%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD ++ P  +  L+  +L++LA E+R+E  S VS+T   L + L  VELTVALH VF
Sbjct: 2   TPLLDQIDLPSDMNGLSDAQLRRLADELRAETISTVSETGGHLGAGLGVVELTVALHAVF 61

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
            AP DKI+WDV  QTY HKILTGRR  I TLR+KDG+SG+T RSES YD F A H   S+
Sbjct: 62  DAPKDKIVWDVSHQTYPHKILTGRRDRIRTLRQKDGLSGFTKRSESPYDCFGAAHSSTSI 121

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LG AVARD+ G+    + VI +G   AG AYEA++NAG+L   +IVILND+  S+ P
Sbjct: 122 SAALGFAVARDLGGEGGDAIAVIGDGAMSAGMAYEALNNAGHLKKRLIVILNDNEMSIAP 181

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                    + A+SS LSR+ +   F++ +  AKG    +   + E A +  +  + M  
Sbjct: 182 --------PVGAMSSYLSRLYAGDPFQEFKAAAKGAVSFLPEPLQEGARRAKDMLKHMT- 232

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTE------ENR-- 370
             G TLFEELG  Y+GP+DGH++E L+SVL+ V  + + GP+L+HV+T+      ENR  
Sbjct: 233 -VGGTLFEELGFSYLGPIDGHDMEQLLSVLRTV-KIRATGPILIHVITKKGKGYAENRAD 290

Query: 371 RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
           R   T K + +  +Q+  + SN       + +Y   F E+L+  A KD  IV V A M  
Sbjct: 291 RGHATAKFDVVTGEQK-KTPSN-------APSYTSVFAESLIKHATKDDKIVAVTAAMPD 342

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L  F  +F  R FDVG+AEQH VTF AGLA GG+KPFC I S FLQR YDQ+V+DV 
Sbjct: 343 GTGLDRFMSRFASRCFDVGIAEQHGVTFCAGLAAGGMKPFCTIYSTFLQRGYDQIVHDVA 402

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            QRLPVRF I  AGLVG+DG T  G+FD+ F++ LP  +VMA +DE EL  MVAT  + D
Sbjct: 403 IQRLPVRFAIDRAGLVGADGATHAGSFDVAFLANLPGFVVMAAADEAELTRMVATAVAHD 462

Query: 551 DRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLS 610
             P+ FR+PRG  V  ++P     P+EIGKG+++  G  VA+L +G  +Q   KA   L+
Sbjct: 463 SGPIAFRFPRGEGVGVEIPD-DAQPLEIGKGRMIRAGARVAILSFGTRLQEIEKACEALA 521

Query: 611 KLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSG 670
             GI  TVADARF KPLD  ++  L ++H  LITVEEG+IGGFGSHV+  +A +G+ D G
Sbjct: 522 TRGITPTVADARFAKPLDRDMILGLARDHEALITVEEGAIGGFGSHVAQLLAEEGVFDHG 581

Query: 671 VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
           +K+R +VLPD +I+ A P +   +AG+   HI    L +LG
Sbjct: 582 LKFRSMVLPDVFIDQAGPREMYEVAGMNAEHIETKVLHVLG 622


>gi|16126307|ref|NP_420871.1| 1-deoxy-D-xylulose-5-phosphate synthase [Caulobacter crescentus
           CB15]
 gi|221235086|ref|YP_002517522.1| 1-deoxy-D-xylulose-5-phosphate synthase [Caulobacter crescentus
           NA1000]
 gi|21263543|sp|Q9A6M5.1|DXS_CAUCR RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|254782066|sp|B8GXC4.1|DXS_CAUCN RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|13423547|gb|AAK24039.1| 1-deoxyxylulose-5-phosphate synthase [Caulobacter crescentus CB15]
 gi|220964258|gb|ACL95614.1| 1-deoxy-D-xylulose 5-phosphate synthase [Caulobacter crescentus
           NA1000]
          Length = 640

 Score =  565 bits (1455), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 301/643 (46%), Positives = 398/643 (61%), Gaps = 30/643 (4%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD + +P   + L++ ELKQLA E+R+E    VS T   L + L  VELTVALHHVF
Sbjct: 5   TPLLDTIASPADTRGLSLAELKQLAAEVRAETIDAVSVTGGHLGAGLGVVELTVALHHVF 64

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D ++WDVG Q Y HKILTGRR  I TLR+  G+SG+T R+ESEYDPF A H   S+
Sbjct: 65  ETPKDIVIWDVGHQAYPHKILTGRRDRIRTLRQGGGLSGFTKRAESEYDPFGAAHAATSI 124

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LG   ARD KG+   ++ VI +G+  AG AYEAM+ A      +IVILND+  S+ P
Sbjct: 125 SAALGFCAARDAKGEDNSVIAVIGDGSLGAGMAYEAMNAATDTTKRLIVILNDNDMSIAP 184

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                    +  +S+ L+ + S  ++R +R++ K + +++   M E A K +EYARGM+ 
Sbjct: 185 --------PVGGMSAYLANLVSGGAYRSVRKLGKTVVEKLPTPMREAARKAEEYARGMV- 235

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR-------- 370
             G T FEELG YYIGP+DGH+++ L+SVL+   + G   PVLVH VT++ +        
Sbjct: 236 -TGGTFFEELGFYYIGPIDGHDMDALVSVLKNAKAFGDK-PVLVHCVTQKGKGYAPAEGA 293

Query: 371 --RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGM 428
             +     K + +  QQ+ A+            +Y   F + L+ +AEKD  IV + A M
Sbjct: 294 ADKLHAVVKFDVVTGQQQKAAGGPP--------SYTKVFAQELIKQAEKDDKIVAITAAM 345

Query: 429 EMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVND 488
                L LF + FPER FDVG+AEQHAVTF+AG+A  G+KPF  I S FLQR YDQVV+D
Sbjct: 346 PSGTGLDLFGKAFPERTFDVGIAEQHAVTFAAGMAADGMKPFAAIYSTFLQRGYDQVVHD 405

Query: 489 VDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVAS 548
           V  Q LPVRF +  AGLVG+DGPT  G+FDI FM  LP M++MA +DE EL  MVAT A 
Sbjct: 406 VAIQGLPVRFAMDRAGLVGADGPTHAGSFDIGFMGALPGMVLMAAADEVELARMVATAAE 465

Query: 549 IDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARAL 608
           IDDRP  FRYPRG  +  D+P     P+EIGKG+++ EG  VA++ +G  +   LKA  L
Sbjct: 466 IDDRPSAFRYPRGEGLGLDMPAI-AEPLEIGKGRIVREGTSVAIVSFGTRLSESLKAADL 524

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLD 668
           L+  G+  TV DARF KPLD+ L+  L + H  +ITVEEGS+GGFG+ V   +A  G LD
Sbjct: 525 LAARGLSATVCDARFAKPLDLDLLLRLAREHEAIITVEEGSMGGFGAFVLQALAQHGALD 584

Query: 669 SGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
            G+K R + LPD + +   P    A AGL    I   ALS +G
Sbjct: 585 RGLKIRTLCLPDVFQDQDKPDAMYAQAGLDAEGILRGALSAMG 627


>gi|384412441|ref|YP_005621806.1| deoxyxylulose-5-phosphate synthase [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|118595489|sp|Q5NM38.2|DXS2_ZYMMO RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase 2; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase 2; Short=DXP
           synthase 2; Short=DXPS 2
 gi|335932815|gb|AEH63355.1| deoxyxylulose-5-phosphate synthase [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
          Length = 650

 Score =  565 bits (1455), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 302/645 (46%), Positives = 398/645 (61%), Gaps = 18/645 (2%)

Query: 73  FWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTV 132
            +  + TP+LD ++ P  L+ L    L+QLA E+R E  S V  T   L S L  +ELTV
Sbjct: 1   MFPNKKTPLLDKIKTPAELRQLDRNSLRQLADELRKETISAVGVTGGHLGSGLGVIELTV 60

Query: 133 ALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAG 192
           ALH+VF+ P D ++WDVG QTY HKILTGRR  I TLR++DG+SG+T R+ESEYD F A 
Sbjct: 61  ALHYVFNTPKDALVWDVGHQTYPHKILTGRRDRIRTLRQRDGLSGFTQRAESEYDAFGAA 120

Query: 193 HGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDS 252
           H   S+SA LG A+A  +    +  V +I +G+  AG AYEAM+NA      +IVILND+
Sbjct: 121 HSSTSISAALGFAMASKLSDSDDKAVAIIGDGSMTAGMAYEAMNNAKAAGKRLIVILNDN 180

Query: 253 RHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEY 312
             S+ P         + ALSS LSR+ SS+ F  LR++ +G+  R+ +G+   A K DEY
Sbjct: 181 EMSISP--------PVGALSSYLSRLISSRPFMNLRDIMRGVVNRMPKGLATAARKADEY 232

Query: 313 ARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRR- 371
           ARGM    G T FEELG YY+GPVDGHN++ LI VL+ V      GP+LVHVVT + +  
Sbjct: 233 ARGMA--TGGTFFEELGFYYVGPVDGHNLDQLIPVLENVRDAKD-GPILVHVVTRKGQGY 289

Query: 372 --AEDTQ-KSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGM 428
             AE  + K  A+++    +      P G  S  Y   F E L+ EA++D  IV + A M
Sbjct: 290 APAEAAKDKYHAVQRLDVVSGKQAKAPPGPPS--YTSVFSEQLIKEAKQDDKIVTITAAM 347

Query: 429 EMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVND 488
                L  FQ+ FPER FDVG+AEQHAVTF+AGLA  G KPFC + S FLQR YDQ+V+D
Sbjct: 348 PTGTGLDRFQQYFPERMFDVGIAEQHAVTFAAGLAAAGYKPFCCLYSTFLQRGYDQLVHD 407

Query: 489 VDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVAS 548
           V  Q LPVRF +  AGLVG+DG T  G+FD+ FM  LPNM+VMAPSDE EL +MV ++A 
Sbjct: 408 VAIQNLPVRFAVDRAGLVGADGATHAGSFDLAFMVNLPNMVVMAPSDERELANMVHSMAH 467

Query: 549 IDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARAL 608
            D  P+  RYPRG  V   L G + I + IGKG+++  GK VA+L  G  ++  LKA   
Sbjct: 468 YDQGPISVRYPRGNGVGVSLEGEKEI-LPIGKGRLIRRGKKVAILSLGTRLEESLKAADR 526

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLD 668
           L   G+  +VAD RF KPLD  L R+L ++H  +IT+EEG++GGF + V    + +GL+D
Sbjct: 527 LDAQGLSTSVADMRFAKPLDEALTRQLLKSHQVIITIEEGALGGFATQVLTMASDEGLMD 586

Query: 669 SGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRT 713
            G+K R + LPD +       +Q A AGL    I A   + L R 
Sbjct: 587 DGLKIRTLRLPDRFQPQDKQERQYAEAGLDADGIVAAVTAALQRN 631


>gi|408788445|ref|ZP_11200164.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium lupini HPC(L)]
 gi|408485687|gb|EKJ94022.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium lupini HPC(L)]
          Length = 639

 Score =  565 bits (1455), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 298/639 (46%), Positives = 404/639 (63%), Gaps = 20/639 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V  P  LK +  ++L +LA E+R E+   VSKT   L + L  VELT+A+H VF
Sbjct: 7   TPLLDRVNFPSDLKEIDDRDLPELARELRDEMIDAVSKTGGHLGAGLGVVELTIAIHKVF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D++++DVG Q Y HKILTGRR  I TLR++ G+SG+T R+ESEYD F AGH   S+
Sbjct: 67  NTPEDRLIFDVGHQCYPHKILTGRRDRIRTLRQEGGLSGFTRRAESEYDDFGAGHSSTSI 126

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVA  + G    ++ VI +G+  AG A+EA++NAG LD+ +IVILND+  S+ P
Sbjct: 127 SAGLGMAVAAGLDGSDRKVIAVIGDGSMSAGMAFEALNNAGALDARLIVILNDNDMSIAP 186

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S+ L+R+ S +++   R+  K +T  +G+ +     +   +ARG + 
Sbjct: 187 --------PTGAMSAYLARLASGRTYMGFRDFGKKLTAYLGKTIDRAITRAVTHARGYV- 237

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G TLFEELG Y+IGP+DGH+ + L+ VL+ V      GPVL+HVVT++ +       +
Sbjct: 238 -TGGTLFEELGFYHIGPIDGHSFDHLLPVLRNVRD-NQKGPVLIHVVTQKGK---GYAPA 292

Query: 379 EAIEKQQEGASDSNSLPFGNY-----SRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
           EA   +  G +  + +          + +Y   F EAL+ EA  D+ I+ V A M     
Sbjct: 293 EAAADKYHGVNKFDVITGAQAKAKPNAPSYTSVFAEALIQEATLDEKIIGVTAAMPNGTG 352

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L    E FP R FDVG+AEQHAVTF+AGLA  G KPFC + S FLQR YDQ+V+DV  Q 
Sbjct: 353 LDKMAELFPARTFDVGIAEQHAVTFAAGLAADGYKPFCALYSTFLQRGYDQLVHDVAIQS 412

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPVRF I  AG VG+DGPT  G+FD TF++ LP M+VMA SDE EL  MV T A+ D+ P
Sbjct: 413 LPVRFPIDRAGFVGADGPTHAGSFDTTFLATLPGMVVMAASDEAELKHMVRTAAAYDEGP 472

Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
           + FRYPRG  V  ++P  RG  ++IGKG+++ EG  VALL +G  +  CL A   L   G
Sbjct: 473 ISFRYPRGEGVGVEMPA-RGEILQIGKGRIIKEGTKVALLSFGTRLAECLAAAEDLDAAG 531

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKW 673
           +  TVADARF KPLD+ L+R+L  +H  L+T+EEGS+GGFG+HV HF+A  GLLD G K 
Sbjct: 532 LSTTVADARFAKPLDLDLIRQLAAHHEVLVTIEEGSVGGFGAHVLHFMASAGLLDHGPKV 591

Query: 674 RPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
           R + LPD ++E A P    A AGL    I +T  + LG+
Sbjct: 592 RTLTLPDQWVEQAKPETMYANAGLDRAGIVSTVFNALGQ 630


>gi|260753843|ref|YP_003226736.1| 1-deoxy-D-xylulose-5-phosphate synthase [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
 gi|258553206|gb|ACV76152.1| deoxyxylulose-5-phosphate synthase [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
          Length = 650

 Score =  564 bits (1454), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 301/645 (46%), Positives = 398/645 (61%), Gaps = 18/645 (2%)

Query: 73  FWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTV 132
            +  + TP+LD ++ P  L+ L    L+QLA E+R E  S V  T   L S L  +ELTV
Sbjct: 1   MFPNKKTPLLDKIKTPAELRQLDRNSLRQLADELRKETISAVGVTGGHLGSGLGVIELTV 60

Query: 133 ALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAG 192
           ALH+VF+ P D ++WDVG QTY HKILTGRR  I TLR++DG+SG+T R+ESEYD F A 
Sbjct: 61  ALHYVFNTPKDALVWDVGHQTYPHKILTGRRDRIRTLRQRDGLSGFTQRAESEYDAFGAA 120

Query: 193 HGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDS 252
           H   S+SA LG A+A  +    +  V +I +G+  AG AYEAM+NA      +IVILND+
Sbjct: 121 HSSTSISAALGFAMASKLSDSDDKAVAIIGDGSMTAGMAYEAMNNAKAAGKRLIVILNDN 180

Query: 253 RHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEY 312
             S+ P         + ALSS LSR+ SS+ F  LR++ +G+  R+ +G+   A K DEY
Sbjct: 181 EMSISP--------PVGALSSYLSRLISSRPFMNLRDIMRGVVNRMPKGLATAARKADEY 232

Query: 313 ARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRR- 371
           ARGM    G T FEELG YY+GPVDGHN++ LI VL+ V      GP+LVHVVT + +  
Sbjct: 233 ARGMA--TGGTFFEELGFYYVGPVDGHNLDQLIPVLENVRDAKD-GPILVHVVTRKGQGY 289

Query: 372 --AEDTQ-KSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGM 428
             AE  + K  A+++    +      P G  S  Y   F E L+ EA++D  IV + A M
Sbjct: 290 APAEAAKDKYHAVQRLDVVSGKQAKAPPGPPS--YTSVFSEQLIKEAKQDDKIVTITAAM 347

Query: 429 EMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVND 488
                L  FQ+ FPER FDVG+AEQHAVTF+AGLA  G KPFC + S FLQR YDQ+V+D
Sbjct: 348 PTGTGLDRFQQYFPERMFDVGIAEQHAVTFAAGLAAAGYKPFCCLYSTFLQRGYDQLVHD 407

Query: 489 VDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVAS 548
           V  Q LPVRF +  AGLVG+DG T  G+FD+ FM  LPNM+VMAPSDE EL +MV ++A 
Sbjct: 408 VAIQNLPVRFAVDRAGLVGADGATHAGSFDLAFMVNLPNMVVMAPSDERELANMVHSMAH 467

Query: 549 IDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARAL 608
            D  P+  RYPRG  V   L G + I + IGKG+++  GK VA+L  G  ++  LKA   
Sbjct: 468 YDQGPISVRYPRGNGVGVSLEGEKEI-LTIGKGRLIRRGKKVAILSLGTRLEESLKAADR 526

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLD 668
           L   G+  +VAD RF KPLD  L R+L ++H  +IT+EEG++GGF + V    + +GL+D
Sbjct: 527 LDAQGLSTSVADMRFAKPLDEALTRQLLKSHQVIITIEEGALGGFATQVLTMASDEGLMD 586

Query: 669 SGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRT 713
            G+K R + LPD +       +Q A AGL    + A   + L R 
Sbjct: 587 DGLKIRTLRLPDRFQPQDKQERQYAEAGLDADGMVAAVTAALQRN 631


>gi|149915301|ref|ZP_01903829.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseobacter sp. AzwK-3b]
 gi|149811022|gb|EDM70861.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseobacter sp. AzwK-3b]
          Length = 642

 Score =  564 bits (1454), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 305/654 (46%), Positives = 410/654 (62%), Gaps = 34/654 (5%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           ++  TP+LDLV++P  +K  +  +L  LA ++R+E  S VS+T   L + L  VELTVAL
Sbjct: 3   NRPDTPLLDLVQSPADIKRFSDAQLVGLAHDLRAETISCVSETGGHLGAGLGVVELTVAL 62

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H VF AP DKI+WDV  Q+Y HKILTGRR  I TLR++DG+SG+T RSES YDPF A H 
Sbjct: 63  HAVFDAPRDKIIWDVSHQSYPHKILTGRRDRIRTLRQRDGLSGFTKRSESPYDPFGAAHS 122

Query: 195 CNSVSAGLGMAVARDIKGKREC----IVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
             S+SA LG AVARD+ G  E      + VI +G   AG A+EAM++AG+L   +IVILN
Sbjct: 123 STSISAALGFAVARDLGGASETGHGDAIAVIGDGAMSAGMAFEAMNHAGHLKKRLIVILN 182

Query: 251 DSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVD 310
           D+  S+ P +         ALSS LSR+ + + F++ +  AKG    +     E A +  
Sbjct: 183 DNEMSIAPPV--------GALSSYLSRLYAGEPFQEFKAAAKGAVSLLPPPFQEGARRAK 234

Query: 311 EYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTE--- 367
           +  +G+    G TLFEELG  YIGP+DGH+++ L+ VL+ V +  + GP L+HV+T    
Sbjct: 235 DMLKGLT--VGGTLFEELGFSYIGPIDGHDMDQLLPVLRTVRARAT-GPTLIHVITRKGK 291

Query: 368 -----ENRR--AEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKD 420
                E RR     T K + +  +Q+ A  SN+    +Y+R + D  +E     A +D  
Sbjct: 292 GYGPAEARRDGGHATAKFDLVTGEQKKAP-SNAP---SYTRVFADALLE----HAAQDDR 343

Query: 421 IVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQR 480
           I  + A M     L LF++++P R FDVG+AEQHAVTF+AGLA GG+KPFC + S FLQR
Sbjct: 344 ICAITAAMPEGTGLDLFEKRYPSRCFDVGIAEQHAVTFAAGLAAGGMKPFCALYSTFLQR 403

Query: 481 AYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELV 540
            YDQVV+DV  QRLPVRF I  AGLVG+DGPT  GAFD+ +++ LP   VMA +DE EL 
Sbjct: 404 GYDQVVHDVAIQRLPVRFAIDRAGLVGADGPTHAGAFDVAYLANLPGFTVMAAADEAELK 463

Query: 541 DMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQ 600
            MVAT  + D+ P+ FRYPRG     ++P  RG  +EIGKG+++ +G  VALL +G  + 
Sbjct: 464 HMVATAVAHDEGPIAFRYPRGEGQGVEMP-ERGEVLEIGKGRMIQQGSRVALLSFGTRLG 522

Query: 601 NCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHF 660
             +KA   L   GI  +VADARF KPLD  L+  L   H  LIT+EEG++GGFGSHV+  
Sbjct: 523 EVMKASEALRARGITPSVADARFAKPLDRDLILGLAARHEALITIEEGAVGGFGSHVAQL 582

Query: 661 IALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTR 714
           +A   + D G+K+R +VLPD +I+ ASP    A AGL   HI A  L +LG  R
Sbjct: 583 LADHAVFDDGLKFRSMVLPDTFIDQASPEDMYATAGLDADHIEAKVLDVLGIAR 636


>gi|329888093|ref|ZP_08266691.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brevundimonas diminuta
           ATCC 11568]
 gi|328846649|gb|EGF96211.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brevundimonas diminuta
           ATCC 11568]
          Length = 636

 Score =  564 bits (1454), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 301/645 (46%), Positives = 396/645 (61%), Gaps = 33/645 (5%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V+ P   +   I +LKQLA E+R+E    VS T   L + L  VELTVALHHVF
Sbjct: 4   TPLLDTVKFPADTRGFDIAQLKQLADEVRAETIDAVSVTGGHLGAGLGVVELTVALHHVF 63

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D ++WDVG Q Y HKILTGRR  + TLR+  G+SG+T RSESEYDPF A H   S+
Sbjct: 64  ETPQDILIWDVGHQCYPHKILTGRRDRMRTLRQGGGLSGFTKRSESEYDPFGAAHASTSI 123

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDS-NMIVILNDSRHSLH 257
           SA LG A ARD KG    +V VI +G+  AG AYEAM+NA    S  ++V+LND+  S+ 
Sbjct: 124 SAALGFAAARDAKGGNNRVVAVIGDGSMSAGMAYEAMNNAAEATSGQLMVVLNDNDMSIA 183

Query: 258 PKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMI 317
           P +          +S+ L++  S  +++ +R+V K     + R   + A K +EYARGMI
Sbjct: 184 PPV--------GGMSAYLAKQVSGGAYQNIRKVGKKFVDHMPRPFRDAARKAEEYARGMI 235

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQK 377
              G TLFEELG YY+GP+DGH++E+L+ +L+  A++    PVLVHVVT++ +     + 
Sbjct: 236 --VGGTLFEELGFYYVGPIDGHDMENLVPILKNAAAITDR-PVLVHVVTQKGKGYAPAES 292

Query: 378 SE-----------AIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHA 426
           S               KQ +  S++ S         Y   F   L+  A+ D  I+ + A
Sbjct: 293 SADKLHAVVKFDVVSGKQAKAVSNAPS---------YTKVFGTELIKHAQVDPTIMAITA 343

Query: 427 GMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVV 486
            M     L LF + FP+R FDVG+AEQHAVTF+AGLA  G+KP C + S FLQR YDQVV
Sbjct: 344 AMPSGTGLDLFGQAFPDRTFDVGIAEQHAVTFAAGLAADGMKPVCALYSTFLQRGYDQVV 403

Query: 487 NDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATV 546
           +DV  Q LPVRF +  AGLVG+DG T  G+FDI +M  LP M++MA SDE EL  M++T 
Sbjct: 404 HDVAIQSLPVRFAMDRAGLVGADGSTHAGSFDIGYMGALPGMVLMAASDEAELAAMISTS 463

Query: 547 ASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
            +IDDRP  FRYPRG  V  D+P     P+EIGKG+++ EG  VA+L  G  +Q  LKA 
Sbjct: 464 LAIDDRPSAFRYPRGEGVGVDIPEL-AAPLEIGKGRIVREGTSVAILSLGTRLQESLKAA 522

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGL 666
            +L+  G+  TVADARF KPLD  L+  L + H  LITVEEG++GGFG+ V   +A  G 
Sbjct: 523 DMLAAKGVSATVADARFAKPLDADLILRLAREHEALITVEEGAMGGFGAFVLQLLAEKGA 582

Query: 667 LDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
           LD G+K R + LPD + +   P    A AGL   HIAA A++ LG
Sbjct: 583 LDGGLKIRTLHLPDIFQDQDKPEVMYAQAGLNAEHIAAAAVTALG 627


>gi|393772959|ref|ZP_10361359.1| 1-deoxy-D-xylulose-5-phosphate synthase [Novosphingobium sp. Rr
           2-17]
 gi|392721698|gb|EIZ79163.1| 1-deoxy-D-xylulose-5-phosphate synthase [Novosphingobium sp. Rr
           2-17]
          Length = 640

 Score =  564 bits (1454), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 302/638 (47%), Positives = 395/638 (61%), Gaps = 22/638 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V NP  L+ L   +L+QLA E+R E  S V +T   L S L  VELTVA+H+VF
Sbjct: 7   TPLLDTVTNPTDLRRLKPAQLRQLADELREETISAVGQTGGHLGSGLGVVELTVAIHYVF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+++WDVG Q Y HKILTGRR  I TLR+  G+SG+T RSESEYDPF A H   S+
Sbjct: 67  NTPDDRLIWDVGHQAYPHKILTGRRDRIRTLRQGGGLSGFTKRSESEYDPFGAAHSSTSI 126

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LG A+A  ++G     + VI +G   AG AYEAM+NA    + ++VILND+  S+ P
Sbjct: 127 SAALGFAIANKLQGTPGRGIAVIGDGAMSAGMAYEAMNNAAEAGNRLVVILNDNDMSIAP 186

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                    +  LSS L+R+ SS  F  LRE+A+   +++ R +H  A K DE+ARGM  
Sbjct: 187 --------PVGGLSSYLARLVSSGQFLGLREMARKFARKLPRPLHVAAKKTDEFARGMA- 237

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR----RAED 374
             G TLFEELG YY+GP+DGH++E L+ VL+ V    + GP+L+HVVT++ +      E 
Sbjct: 238 -MGGTLFEELGFYYVGPIDGHDLEALVPVLENVRD-AAEGPILIHVVTQKGKGYVPAEEA 295

Query: 375 TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
             K   ++K      +    P G  S  Y   F +AL+ EA++D  I  + A M     L
Sbjct: 296 ADKYHGVQKFNVVTGEQAKSPAGPPS--YTGVFAKALIAEAQRDDRICAITAAMPSGTGL 353

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F + FP R FDVG+AEQHAVTF+AGLA  G++PFC I S FLQRA+DQVV+DV  Q L
Sbjct: 354 DKFGDLFPGRSFDVGIAEQHAVTFAAGLAAQGMRPFCAIYSTFLQRAFDQVVHDVAIQNL 413

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PVRF I  AGLVG+DG T  G+FD+T+++ LPN++VMA +DE ELV MV T A  D  P+
Sbjct: 414 PVRFAIDRAGLVGADGATHAGSFDVTYLATLPNLVVMAAADEAELVHMVHTAALHDSSPI 473

Query: 555 CFRYPRGAIVRTDLPGYRGIP--IEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
            FRYPRG  V   LP    +P  +EIGKG+V+ EG  VA+L  G  +   LKA   L   
Sbjct: 474 AFRYPRGNGVGVPLP---QVPERLEIGKGRVVREGSKVAILSLGTRLAEALKAADTLEAK 530

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 672
           G+  TVAD RF KPLD  L+R L   H  ++TVEEG+IGG G+HV    + +GL D+G+K
Sbjct: 531 GLSTTVADLRFAKPLDTDLIRRLMTTHEVVVTVEEGAIGGLGAHVLTLASDEGLTDAGLK 590

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
            R + LPD + +   P  Q   AGL    I  T L  L
Sbjct: 591 IRTLRLPDVFQDQNKPEAQYDEAGLNAPQIVDTVLKAL 628


>gi|424909631|ref|ZP_18333008.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium leguminosarum
           bv. viciae USDA 2370]
 gi|392845662|gb|EJA98184.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium leguminosarum
           bv. viciae USDA 2370]
          Length = 636

 Score =  564 bits (1453), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 298/639 (46%), Positives = 404/639 (63%), Gaps = 20/639 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V  P  LK +  ++L +LA E+R E+   VSKT   L + L  VELT+A+H VF
Sbjct: 4   TPLLDRVNFPSDLKEIDDRDLPELARELRDEMIDAVSKTGGHLGAGLGVVELTIAIHKVF 63

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D++++DVG Q Y HKILTGRR  I TLR++ G+SG+T R+ESEYD F AGH   S+
Sbjct: 64  NTPEDRLIFDVGHQCYPHKILTGRRDRIRTLRQEGGLSGFTRRAESEYDDFGAGHSSTSI 123

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVA  + G    ++ VI +G+  AG A+EA++NAG LD+ +IVILND+  S+ P
Sbjct: 124 SAGLGMAVAAGLDGSDRKVIAVIGDGSMSAGMAFEALNNAGALDARLIVILNDNDMSIAP 183

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S+ L+R+ S +++   R+  K +T  +G+ +     +   +ARG + 
Sbjct: 184 --------PTGAMSAYLARLASGRTYMGFRDFGKKLTAYLGKTIDRAITRAVTHARGYV- 234

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G TLFEELG Y+IGP+DGH+ + L+ VL+ V      GPVL+HVVT++ +       +
Sbjct: 235 -TGGTLFEELGFYHIGPIDGHSFDHLLPVLRNVRD-NQKGPVLIHVVTQKGK---GYAPA 289

Query: 379 EAIEKQQEGASDSNSLPFGNY-----SRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
           EA   +  G +  + +          + +Y   F EAL+ EA  D+ I+ V A M     
Sbjct: 290 EAAADKYHGVNKFDVITGAQAKAKPNAPSYTSVFAEALIQEATLDEKIIGVTAAMPNGTG 349

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L    E FP R FDVG+AEQHAVTF+AGLA  G KPFC + S FLQR YDQ+V+DV  Q 
Sbjct: 350 LDKMAELFPARTFDVGIAEQHAVTFAAGLAADGYKPFCALYSTFLQRGYDQLVHDVAIQS 409

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPVRF I  AG VG+DGPT  G+FD TF++ LP M+VMA SDE EL  MV T A+ D+ P
Sbjct: 410 LPVRFPIDRAGFVGADGPTHAGSFDTTFLATLPGMVVMAASDEAELKHMVRTAAAYDEGP 469

Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
           + FRYPRG  V  ++P  RG  ++IGKG+++ EG  VALL +G  +  CL A   L   G
Sbjct: 470 ISFRYPRGEGVGVEMPA-RGEILQIGKGRIIKEGTKVALLSFGTRLAECLAAAEDLDAAG 528

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKW 673
           +  TVADARF KPLD+ L+R+L  +H  L+T+EEGS+GGFG+HV HF+A  GLLD G K 
Sbjct: 529 LSTTVADARFAKPLDLDLIRQLAAHHEILVTIEEGSVGGFGAHVLHFMASAGLLDHGPKV 588

Query: 674 RPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
           R + LPD ++E A P    A AGL    I +T  + LG+
Sbjct: 589 RTLTLPDQWVEQAKPETMYANAGLDRAGIISTVFNALGQ 627


>gi|334139802|ref|YP_004533000.1| 1-deoxy-D-xylulose-5-phosphate synthase [Novosphingobium sp. PP1Y]
 gi|333937824|emb|CCA91182.1| 1-deoxy-D-xylulose-5-phosphate synthase [Novosphingobium sp. PP1Y]
          Length = 640

 Score =  564 bits (1453), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 297/636 (46%), Positives = 397/636 (62%), Gaps = 18/636 (2%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V+ P+ L+ L   +L+QLA E+R E+ S V +T   L S L  VELTVALH+VF
Sbjct: 7   TPLLDTVDTPVDLRKLKPAQLRQLADELREEMISAVGQTGGHLGSGLGVVELTVALHYVF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+++WDVG Q Y HKILTGRR  I TLR+  G+SG+T RSESEYDPF   H   S+
Sbjct: 67  NTPEDRLVWDVGHQAYPHKILTGRRDRIRTLRQGGGLSGFTKRSESEYDPFGTAHSSTSI 126

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LG A+A  +  +    + VI +G   AG AYEAM+NA    + ++VILND+  S+ P
Sbjct: 127 SAALGFAIANKLSNQPGRGIAVIGDGAMSAGMAYEAMNNAREAGNRLVVILNDNDMSIAP 186

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                    +  LS+ L+++ SS+ F  +R+ A+ +++R+   +H  A K DE+ARGM  
Sbjct: 187 --------PVGGLSAYLAQLVSSRPFLNIRDFARKVSRRLPEALHRAAKKTDEFARGMA- 237

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR----RAED 374
             G TLFEELG YY+GPVDGHN+E LI +L+ V    + GP+L+HVVT++ +      E 
Sbjct: 238 -MGGTLFEELGFYYVGPVDGHNLEQLIPILENVRD-AAEGPILIHVVTKKGKGYAPAEEA 295

Query: 375 TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
             K   ++K      +    P G  S  Y   F +AL+ EA+ D  +  + A M     L
Sbjct: 296 ADKYHGVQKFNVVTGEQAKAPAGPPS--YTGVFAKALIAEAKGDPRVCAITAAMPSGTGL 353

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F  +FPER FDVG+AEQHAVTF+AGLA  G++PFC I S FLQRA+DQVV+DV  Q L
Sbjct: 354 DKFASQFPERSFDVGIAEQHAVTFAAGLAAQGMRPFCAIYSTFLQRAFDQVVHDVAIQNL 413

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PVRF I  AGLVG+DG T  G+FD+T+++ LPN +VMA +DE ELV MV T A  D  P+
Sbjct: 414 PVRFAIDRAGLVGADGATHAGSFDVTYLATLPNFVVMAAADEAELVHMVHTAAQHDSGPI 473

Query: 555 CFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGI 614
            FRYPRG      LP    + +EIGKG+++ EG  VALL  G  +   LKA   L   G+
Sbjct: 474 AFRYPRGNGTGVALPEKPEV-LEIGKGRIVREGTKVALLSLGTRLGEALKAADTLEAKGL 532

Query: 615 DVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWR 674
             TVAD RF KPLD +L+R+L  +H  ++TVEEGSIGG G+HV    + +GL D+G++ R
Sbjct: 533 STTVADLRFAKPLDSELIRKLMLSHEVVVTVEEGSIGGLGAHVLTMASDEGLTDNGLRIR 592

Query: 675 PIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
            + LPD + +H  P  Q   AGL    I  T L  L
Sbjct: 593 TMRLPDVFQDHDKPEAQYDEAGLNAPQIVDTVLKAL 628


>gi|399994532|ref|YP_006574772.1| 1-deoxy-D-xylulose-5-phosphate synthase [Phaeobacter gallaeciensis
           DSM 17395 = CIP 105210]
 gi|398659087|gb|AFO93053.1| 1-deoxy-D-xylulose-5-phosphate synthase Dxs [Phaeobacter
           gallaeciensis DSM 17395 = CIP 105210]
          Length = 642

 Score =  563 bits (1452), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 300/651 (46%), Positives = 403/651 (61%), Gaps = 34/651 (5%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           D+  TP+LD +  P  LKSL+  +L Q+A E+R E  S VS T   L + L  VELT AL
Sbjct: 3   DRPQTPLLDQITRPADLKSLSDAQLTQVAQELRQETISAVSVTGGHLGAGLGVVELTTAL 62

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H VF  P DKI+WDV  Q Y HKILTGRR  I TLR KDG+SG+T RSES +DPF A H 
Sbjct: 63  HAVFDTPRDKIIWDVSHQCYPHKILTGRRDRIRTLRMKDGLSGFTKRSESPFDPFGAAHS 122

Query: 195 CNSVSAGLGMAVARDIKG----KRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
             S+SA LG AVARD+ G         + VI +G+  AG A+EAM+NAG+L   +IVILN
Sbjct: 123 STSISAALGFAVARDLGGVVPEGLGDAIAVIGDGSMSAGMAFEAMNNAGHLGKRLIVILN 182

Query: 251 DSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVD 310
           D+  S+ P         + ALSS LSR+ + + F++L+ VAKG    +     E A +  
Sbjct: 183 DNEMSIAP--------PVGALSSYLSRLYAEEPFQELKAVAKGAASLLPEPFREGAKRAK 234

Query: 311 EYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR 370
           +  +GM    G TLFE LG  Y+GP+DGH+++ L+ VL+ V +  + GP+L+HV+T++ +
Sbjct: 235 DMLKGMA--VGGTLFESLGFSYLGPIDGHDMDQLLPVLRTVKARAT-GPILIHVLTKKGK 291

Query: 371 ----------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKD 420
                     +   T K + +  +Q+ A  +        + +Y   F + LV  A +D  
Sbjct: 292 GYAPAEAARDKGHATAKFDMVTGEQKKAPSN--------APSYTSVFGKELVRLAAEDDK 343

Query: 421 IVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQR 480
           I  V A M     L L  E++P R FDVG+AEQH VTF+A LA GG+KPFC + S FLQR
Sbjct: 344 ICAVTAAMPDGTGLSLMAERYPSRTFDVGIAEQHGVTFAAALAAGGMKPFCAMYSTFLQR 403

Query: 481 AYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELV 540
            YDQVV+DV  QRLPVRF I  AGLVG+DG T  G+FDI +M+ LP M+VMA +DE EL 
Sbjct: 404 GYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGSFDIAYMANLPGMVVMAAADEAELA 463

Query: 541 DMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQ 600
            M AT A+ DD P+ FRYPRG     D+P    + +EIGKG+++ EGK VA+L +G  + 
Sbjct: 464 HMTATAAAYDDGPIAFRYPRGEGEGVDMPEAPEV-LEIGKGRMIQEGKRVAILSFGTRLG 522

Query: 601 NCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHF 660
              KA   LS  GI  T+ADARF KPLD  ++ +L  +H  LIT+EEG++GGFGSHV+  
Sbjct: 523 EVRKAAEALSARGITPTIADARFAKPLDRDMILKLAADHEALITIEEGAVGGFGSHVAQL 582

Query: 661 IALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
           +A +G+ DSG+K+R +VLPD +I+ ASP     +A +    I A  L +LG
Sbjct: 583 LAEEGIFDSGLKYRSMVLPDTFIDQASPADMYNVAAMNAPQIEAKVLEVLG 633


>gi|330994689|ref|ZP_08318612.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconacetobacter sp.
           SXCC-1]
 gi|329758330|gb|EGG74851.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconacetobacter sp.
           SXCC-1]
          Length = 663

 Score =  563 bits (1452), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 308/653 (47%), Positives = 412/653 (63%), Gaps = 35/653 (5%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P LD V  P  L++L++++L+QLA E+RSE    VS T   L +SL  VELTVALH VF 
Sbjct: 17  PQLDRVRAPHDLRNLSVEQLRQLADELRSETIDAVSTTGGHLGASLGVVELTVALHAVFD 76

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG Q Y HKILTGRR  I TLR+  G+SG+T RSESEYDPF A H   S+S
Sbjct: 77  TPDDRVIWDVGHQAYPHKILTGRRERIRTLRQPGGLSGFTRRSESEYDPFGAAHSSTSIS 136

Query: 200 AGLGMAVARDIKG------KRECIVTVISNGTTMAGQAYEAMSNAGYLD---SNMIVILN 250
           AGLGMAVA  ++       +   ++ VI +G+  AG AYEAM+NA +       +IV+LN
Sbjct: 137 AGLGMAVAHHLRAEEDPSYRERNVIAVIGDGSISAGMAYEAMNNASHCGPGAERLIVVLN 196

Query: 251 DSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVD 310
           D+  S+ P +         A+SS LSR+ SS+ F  LRE+A  M KR+   +   A K D
Sbjct: 197 DNEMSIAPPV--------GAMSSYLSRLMSSRKFLSLRELAAKMAKRLPGRLERTAKKAD 248

Query: 311 EYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN- 369
           EYARG++   G TLFEELG YY+GPVDGH++  L+ +L+ +     +GPVL+HV+TE+  
Sbjct: 249 EYARGIM--TGGTLFEELGFYYVGPVDGHDMNQLVHILRNLRDAEDVGPVLLHVITEKGH 306

Query: 370 --RRAEDT-QKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHA 426
             + AE    K  A+ K      +    P G  S  Y   F + LV +A  D  IV + A
Sbjct: 307 GYKPAESAGDKYHAVSKFNVVTGEQKKGPSGPPS--YTSVFAKELVRQAATDDRIVTITA 364

Query: 427 GMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVV 486
            M     L  F + +P+R+FDVG+AEQHAVTF+AG+A  GL+PFC I S+FLQRAYDQV+
Sbjct: 365 AMPSGTGLDKFAKAYPDRFFDVGIAEQHAVTFAAGMATEGLRPFCAIYSSFLQRAYDQVM 424

Query: 487 NDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATV 546
           +DV  Q+LPVRF I  AGLVG+DG T  G+FDI ++ CLP + +MAPS E EL+ M AT 
Sbjct: 425 HDVVLQKLPVRFAIDRAGLVGADGATHAGSFDIAYLGCLPGITLMAPSTEVELMHMTATA 484

Query: 547 ASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVE-----GKD---VALLGYGAM 598
            + D+ P+  RYPRGA +   LP   G  +EIG+G+++ E     G +   +A+L  G  
Sbjct: 485 IAFDEGPIGLRYPRGAGLGLALPAA-GEVLEIGRGRIVREMARQSGPEQGGIAILSLGPR 543

Query: 599 VQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVS 658
           +++ LKA  +L+  G+  TVADARF KP+D  LV +L +NH  LIT+EEGS+GGF S V 
Sbjct: 544 LEHALKAADMLAAHGLSPTVADARFAKPIDTALVEQLARNHAVLITIEEGSVGGFASFVM 603

Query: 659 HFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
             +A  GLLD  V++RP+ LPD +I+H +   Q   AGL    I  TALS LG
Sbjct: 604 THLARTGLLDR-VRFRPMTLPDRFIDHNTQDAQYIEAGLDAASIVKTALSALG 655


>gi|146278064|ref|YP_001168223.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacter sphaeroides
           ATCC 17025]
 gi|145556305|gb|ABP70918.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Rhodobacter sphaeroides
           ATCC 17025]
          Length = 648

 Score =  563 bits (1452), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 297/642 (46%), Positives = 405/642 (63%), Gaps = 22/642 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V  P  +K+L   EL++LA E+RSE+ S+V++T   L SSL  VELTVALH VF
Sbjct: 10  TPLLDRVCCPADMKALNDAELERLADEVRSEVISVVAETGGHLGSSLGVVELTVALHAVF 69

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P DK++WDVG Q Y HKILTGRR  + TLR+K G+SG+T RSES+YDPF A H   S+
Sbjct: 70  NTPTDKLIWDVGHQCYPHKILTGRREQMRTLRQKGGLSGFTKRSESDYDPFGAAHSSTSI 129

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LG A+ R++       + VI +G+  AG AYEA+++AG+L+  + VILND+  S+ P
Sbjct: 130 SAALGFAMGRELGQPVGDTIAVIGDGSITAGMAYEALNHAGHLNKRLFVILNDNDMSIAP 189

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                    + AL+  L  + S   F  LR  A G+   +   + + A +  +   GM  
Sbjct: 190 P--------VGALARYLVNLSSKAPFATLRAAADGIESALPGPLRDGARRARQLVTGM-- 239

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
           P G TLFEELG  Y+GP+DGH++  L+  L+  A   + GPVL+HVVT   R+ +    +
Sbjct: 240 PGGGTLFEELGFTYVGPIDGHDMPSLLQTLR-AARARTTGPVLIHVVT---RKGKGYAPA 295

Query: 379 EAIEKQQEGASDSNSLPFGNYSRT------YDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
           E    +  G +  + +  G   ++      Y   F   L  EA +D  IV + A M    
Sbjct: 296 ENAPDKYHGVNKFDPV-TGEQKKSVANAPNYTKVFGTTLTDEAARDPRIVAITAAMPSGT 354

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            + + Q++FP R FDVG+AEQHAVTF+AGLA  G+KPFC I S+FLQR YDQ+ +DV  Q
Sbjct: 355 GVDIMQKRFPNRVFDVGIAEQHAVTFAAGLAGAGMKPFCAIYSSFLQRGYDQIAHDVALQ 414

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
            LPVRFVI  AGLVG+DG T  GAFD+ F++ LPN+ VMA +DE ELV M+AT  + D+ 
Sbjct: 415 NLPVRFVIDRAGLVGADGATHAGAFDVGFLTTLPNLTVMAAADEAELVHMIATAVAFDEG 474

Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
           P+ FR+PRG  V  ++P  RG  +E G+G+V+ EG DVA+L +GA +   L+A  LL   
Sbjct: 475 PIAFRFPRGEGVGVEMP-ERGTVLEPGRGRVVREGTDVAILSFGAHLHEALQAAKLLEAE 533

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 672
           G+ VTVADARF +PLD  L+ +L ++H  L+TVE+G++GGFG+HV H++A  G  D G+ 
Sbjct: 534 GVSVTVADARFSRPLDTGLIDQLVRHHPALVTVEQGAMGGFGAHVMHYLANSGGFDGGLA 593

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTR 714
            R + LPD +IE ASP    A AGL    IAATA S L R R
Sbjct: 594 LRVMTLPDRFIEQASPEDMYADAGLRAEDIAATARSALARGR 635


>gi|424915247|ref|ZP_18338611.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium leguminosarum
           bv. trifolii WSM597]
 gi|392851423|gb|EJB03944.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium leguminosarum
           bv. trifolii WSM597]
          Length = 638

 Score =  563 bits (1450), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 297/640 (46%), Positives = 404/640 (63%), Gaps = 22/640 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V  P  L+ L  ++L QLA E+R E+   VS+T   L + L  VELT+A+H VF
Sbjct: 7   TPLLDQVTYPADLRKLEDRDLPQLAREVRDEMIDAVSRTGGHLGAGLGVVELTIAIHSVF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D++++DVG Q Y HKILTGRR  I TLR++DG+SG+T R+ESEYDPF A H   S+
Sbjct: 67  DTPDDRLIFDVGHQCYPHKILTGRRDRIRTLRQEDGLSGFTRRAESEYDPFGAAHSSTSI 126

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMA+A D+      ++ VI +G   AG AYEA++NAG LD+ +IVILND+  S+ P
Sbjct: 127 SAGLGMAIAADLDKNDRRVIAVIGDGAMSAGMAYEALNNAGALDARLIVILNDNDMSIAP 186

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S+ L+R+ S +++   R+  K +T  +G+ +     +  E+ARG + 
Sbjct: 187 --------PTGAMSAYLARLASGRTYMGFRDFGKKLTAYLGKNIDRAITRAVEHARGYV- 237

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G T+FEE+G Y+IGP+DGH+ + L+ VL+ V    + GPVL+HVVT++ +       +
Sbjct: 238 -TGGTMFEEMGFYHIGPIDGHSFDHLLPVLRNVRD-NARGPVLIHVVTQKGK---GYPPA 292

Query: 379 EAIEKQQEGASDSNSLPFGNYSR------TYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
           EA   +  G +  + +  G  +R      +Y   F EALV EA  D  IV + A M    
Sbjct: 293 EAAADKYHGVNKFDVIT-GAQARVKPNAPSYTSVFAEALVQEATLDDKIVGITAAMPNGT 351

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            L    E FP R FDVG+AEQHAVTF+AGLA  G KPF  + S FLQRAYDQVV+DV  Q
Sbjct: 352 GLDKLAEAFPSRCFDVGIAEQHAVTFAAGLAAEGYKPFAALYSTFLQRAYDQVVHDVAIQ 411

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
            LPVRF I  AG VG+DGPT  G+FD  F++ LP  +VMA +DE EL  MV T  + D  
Sbjct: 412 GLPVRFPIDRAGFVGADGPTHAGSFDTAFLTTLPGFVVMAAADEAELKHMVRTAVAYDAG 471

Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
           P+ FRYPRG  V  D+P  RG  ++IGKG+++ EG  VALL +G  + +CL A   L   
Sbjct: 472 PISFRYPRGEGVGVDMPA-RGEILQIGKGRIVKEGTKVALLSFGTRLADCLLAAEDLDAA 530

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 672
           G+  TVADARF KPLD  L+R+L ++H  +IT+EEGS+GGFGS V  +++ +GLLD+G+K
Sbjct: 531 GLSTTVADARFAKPLDHDLIRQLARHHEMVITIEEGSVGGFGSQVMQYLSSEGLLDNGLK 590

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
            R +V+PD ++E A P    A AGL    I +T    LGR
Sbjct: 591 IRSLVMPDIWMEQAKPEAMNAHAGLDRAGIVSTVFRALGR 630


>gi|359399199|ref|ZP_09192204.1| 1-deoxy-D-xylulose-5-phosphate synthase [Novosphingobium
           pentaromativorans US6-1]
 gi|357599405|gb|EHJ61118.1| 1-deoxy-D-xylulose-5-phosphate synthase [Novosphingobium
           pentaromativorans US6-1]
          Length = 640

 Score =  563 bits (1450), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 297/636 (46%), Positives = 396/636 (62%), Gaps = 18/636 (2%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V+ P+ L+ L   +L+QLA E+R E+ S V +T   L S L  VELTVALH+VF
Sbjct: 7   TPLLDTVDTPVDLRKLKPAQLRQLADELREEMISAVGQTGGHLGSGLGVVELTVALHYVF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+++WDVG Q Y HKILTGRR  I TLR+  G+SG+T RSESEYDPF   H   S+
Sbjct: 67  NTPEDRLVWDVGHQAYPHKILTGRRDRIRTLRQGGGLSGFTKRSESEYDPFGTAHSSTSI 126

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LG A+A  +  +    + VI +G   AG AYEAM+NA    + ++VILND+  S+ P
Sbjct: 127 SAALGFAIANKLSNQPGRGIAVIGDGAMSAGMAYEAMNNAREAGNRLVVILNDNDMSIAP 186

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                    +  LS+ L+++ SS+ F  +R+ A+ +++R+   +H  A K DE+ARGM  
Sbjct: 187 --------PVGGLSAYLAQLVSSRPFLNIRDFARKVSRRLPEALHRAAKKTDEFARGMA- 237

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR----RAED 374
             G TLFEELG YY+GPVDGHN+E LI +L+ V    + GP+L+HVVT++ +      E 
Sbjct: 238 -MGGTLFEELGFYYVGPVDGHNLEQLIPILENVRD-AAEGPILIHVVTKKGKGYAPAEEA 295

Query: 375 TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
             K   ++K      +    P G  S  Y   F +AL+ EA+ D  +  + A M     L
Sbjct: 296 ADKYHGVQKFNVVTGEQAKAPAGPPS--YTGVFAKALIAEAKGDPRVCAITAAMPSGTGL 353

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F  +FPER FDVG+AEQHAVTF+AGLA  G++PFC I S FLQRA+DQVV+DV  Q L
Sbjct: 354 DKFASQFPERSFDVGIAEQHAVTFAAGLAAQGMRPFCAIYSTFLQRAFDQVVHDVAIQNL 413

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PVRF I  AGLVG+DG T  G+FD+T+++ LPN +VMA +DE ELV MV T A  D  P+
Sbjct: 414 PVRFAIDRAGLVGADGATHAGSFDVTYLATLPNFVVMAAADEAELVHMVHTAAQHDSGPI 473

Query: 555 CFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGI 614
            FRYPRG      LP    + +EIGKG+++ EG  VALL  G  +   LKA   L   G+
Sbjct: 474 AFRYPRGNGTGVALPEKPEV-LEIGKGRIVREGTKVALLSLGTRLGEALKAADTLEAKGL 532

Query: 615 DVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWR 674
             TVAD RF KPLD  L+R+L  +H  ++TVEEGSIGG G+HV    + +GL D+G++ R
Sbjct: 533 STTVADLRFAKPLDSDLIRKLMLSHEVVVTVEEGSIGGLGAHVLTMASDEGLTDNGLRIR 592

Query: 675 PIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
            + LPD + +H  P  Q   AGL    I  T L  L
Sbjct: 593 TMRLPDVFQDHDKPEAQYDEAGLNAPQIVDTVLKAL 628


>gi|114769862|ref|ZP_01447472.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacterales bacterium
           HTCC2255]
 gi|114549567|gb|EAU52449.1| 1-deoxy-D-xylulose-5-phosphate synthase [alpha proteobacterium
           HTCC2255]
          Length = 642

 Score =  562 bits (1449), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 293/642 (45%), Positives = 408/642 (63%), Gaps = 26/642 (4%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TPILD + +P  +K+L+  +L QLA E+RSE  SIVS+T   L + L  VELT A+H VF
Sbjct: 8   TPILDRINSPEDMKNLSDAQLYQLAKELRSETISIVSETGGHLGAGLGVVELTTAIHAVF 67

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDV  Q Y HKILTGRR+ + T+RK  G+SG+T RSES +DPF A H   S+
Sbjct: 68  DTPKDRLIWDVSHQCYPHKILTGRRNQMRTIRKGGGLSGFTKRSESAFDPFGAAHSSTSI 127

Query: 199 SAGLGMAVARDIKGKREC----IVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
           SA LG AVARD+ G  E      + VI +G+  AG AYEAM+NAG+L   +IVILND++ 
Sbjct: 128 SAALGFAVARDLGGAPEHGLGDAIAVIGDGSMSAGMAYEAMNNAGHLGKRLIVILNDNKM 187

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+ P         + A+S+ LSR+ + + F++L+  AKG    +     + A +  +  +
Sbjct: 188 SIAP--------PVGAMSTYLSRLYAGEPFQELKAAAKGAVSLLPSPFQDGAKRARDILK 239

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAED 374
            M    G TLFE+LG  YIGP+DGH++E L++VL+ V    + GP+L+H +T+   + + 
Sbjct: 240 HMT--IGGTLFEQLGFSYIGPIDGHDMEQLLNVLRTVKDRAT-GPILIHAITQ---KGKG 293

Query: 375 TQKSEAIEKQQEGASDSNSLPFGNYSRT------YDDCFIEALVMEAEKDKDIVVVHAGM 428
              +EA   +  G +  N +  G   +T      Y   F  AL+ EA +D  IV V A M
Sbjct: 294 YAPAEASSDKYHGVAKFNVVS-GQQQKTPSNAPSYTKVFANALIAEASEDDKIVAVTAAM 352

Query: 429 EMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVND 488
                L +F++ +P R FDVG+AEQHAVTF AG+A GG+KPFC + S FLQR YDQVV+D
Sbjct: 353 PDGTGLDIFEKHYPSRTFDVGIAEQHAVTFCAGMAAGGMKPFCALYSTFLQRGYDQVVHD 412

Query: 489 VDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVAS 548
           V  QRLPVRF I  AGLVG+DG T  G+FDI+F++ LP+++VMA +DE EL+ MVAT  S
Sbjct: 413 VALQRLPVRFAIDRAGLVGADGATHAGSFDISFLTNLPDIVVMAAADEAELMHMVATARS 472

Query: 549 IDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARAL 608
           IDDRP  FR+PRG  V  DLP  +G  +EIGKG+++ +G  +A+L +GA +Q  LKA   
Sbjct: 473 IDDRPSAFRFPRGEGVGVDLP-EKGRVLEIGKGRIIQQGSKIAILSFGARLQEVLKAADS 531

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLD 668
           LS  GI  T+ADARF KPLD +++ +L   H  LIT+EEG +GGFGSHV   +  +G+ D
Sbjct: 532 LSLRGIKPTIADARFAKPLDKQMILDLVSKHDALITIEEGVVGGFGSHVQQLLLDEGIFD 591

Query: 669 SGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
            G K+R +VLPD +++  +P      A ++ + I      +L
Sbjct: 592 HGFKFRSMVLPDTFLDQDTPKNMYENAAMSANDIEEKVFDIL 633


>gi|424898574|ref|ZP_18322148.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium leguminosarum
           bv. trifolii WSM2297]
 gi|393182801|gb|EJC82840.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium leguminosarum
           bv. trifolii WSM2297]
          Length = 638

 Score =  561 bits (1447), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 298/640 (46%), Positives = 404/640 (63%), Gaps = 22/640 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V  P  L+ L  ++L QLA E+R E+   VS+T   L + L  VELT+A+H VF
Sbjct: 7   TPLLDQVIYPADLRKLEDRDLPQLAREVRDEMIDAVSRTGGHLGAGLGVVELTIAIHSVF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D++++DVG Q Y HKILTGRR  I TLR++DG+SG+T R+ESEYDPF A H   S+
Sbjct: 67  DTPDDRLIFDVGHQCYPHKILTGRRDRIRTLRQEDGLSGFTRRAESEYDPFGAAHSSTSI 126

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMA+A D+      ++ VI +G   AG AYEA++NAG LD+ +IVILND+  S+ P
Sbjct: 127 SAGLGMAIAADLDKNDRRVIAVIGDGAMSAGMAYEALNNAGALDARLIVILNDNDMSIAP 186

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S+ L+R+ S +++   R+  K +T  +G+ +     +  E+ARG + 
Sbjct: 187 --------PTGAMSAYLARLASGRTYMGFRDFGKKLTAYLGKNIDRAITRAVEHARGYV- 237

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G T+FEE+G Y+IGP+DGH+ + L+ VL+ V   G  GPVL+HVVT++ +       +
Sbjct: 238 -TGGTMFEEMGFYHIGPIDGHSFDHLLPVLRNVRDNGR-GPVLIHVVTQKGK---GYPPA 292

Query: 379 EAIEKQQEGASDSNSLPFGNYSR------TYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
           EA   +  G +  + +  G  +R      +Y   F EALV EA  D  IV + A M    
Sbjct: 293 EAAADKYHGVNKFDVIT-GAQARVKPNAPSYTSVFAEALVQEATLDDKIVGITAAMPNGT 351

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            L    E FP R FDVG+AEQHAVTF+AGLA  G KPF  + S FLQRAYDQVV+DV  Q
Sbjct: 352 GLDKLAEAFPSRCFDVGIAEQHAVTFAAGLAAEGYKPFAALYSTFLQRAYDQVVHDVAIQ 411

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
            LPVRF I  AG VG+DGPT  G+FD  F++ LP  +VMA +DE EL  MV T  + D  
Sbjct: 412 GLPVRFPIDRAGFVGADGPTHAGSFDTAFLTTLPGFVVMAAADEAELKHMVRTAVAYDGG 471

Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
           P+ FRYPRG  V  D+P  RG  ++IG+G+++ EG  VALL +G  + +CL A   L   
Sbjct: 472 PISFRYPRGEGVGVDMP-VRGEILQIGRGRIVKEGTKVALLSFGTRLADCLLAAEDLDAA 530

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 672
           G+  TVADARF KPLD  L+R+L ++H  +ITVEEGS+GGFGS V  +++ +GLLD+G+K
Sbjct: 531 GLSTTVADARFAKPLDHDLIRQLARHHEMVITVEEGSVGGFGSQVMQYLSSEGLLDNGLK 590

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
            R +V+PD ++E A P    A AGL    I +T    LGR
Sbjct: 591 IRSLVMPDIWMEQAKPEAMNAHAGLDRAGIVSTVFRALGR 630


>gi|190890626|ref|YP_001977168.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium etli CIAT 652]
 gi|229836075|sp|B3PS68.1|DXS_RHIE6 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|190695905|gb|ACE89990.1| 1-deoxy-D-xylulose-5-phosphate synthase protein [Rhizobium etli
           CIAT 652]
          Length = 638

 Score =  561 bits (1447), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 298/640 (46%), Positives = 404/640 (63%), Gaps = 22/640 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V  P  L+ L  ++L QLA E+R E+   VS+T   L + L  VELT+A+H VF
Sbjct: 7   TPLLDQVIYPADLRKLEDRDLPQLAREVRDEMIDAVSRTGGHLGAGLGVVELTIAIHSVF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D++++DVG Q Y HKILTGRR  I TLR+++G+SG+T R+ESEYDPF A H   S+
Sbjct: 67  DTPDDRLIFDVGHQCYPHKILTGRRDRIRTLRQENGLSGFTRRAESEYDPFGAAHSSTSI 126

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMA+A D+      ++ VI +G   AG AYEA++NAG LD+ +IVILND+  S+ P
Sbjct: 127 SAGLGMAIAADLDKNDRRVIAVIGDGAMSAGMAYEALNNAGALDARLIVILNDNDMSIAP 186

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S+ L+R+ S +++   R+  K +T  +G+ +     +  E+ARG + 
Sbjct: 187 --------PTGAMSAYLARLASGRTYMGFRDFGKKLTAYLGKNIDRAITRAVEHARGYV- 237

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G T+FEE+G Y+IGP+DGH+ + L+ VL+ V    + GPVL+HVVT++ +       +
Sbjct: 238 -TGGTMFEEMGFYHIGPIDGHSFDHLLPVLRNVRD-NARGPVLIHVVTQKGK---GYPPA 292

Query: 379 EAIEKQQEGASDSNSLPFGNYSR------TYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
           EA   +  G +  + +  G  +R      +Y   F EALV EA  D  IV + A M    
Sbjct: 293 EAAADKYHGVNKFDVIT-GAQARVKPNAPSYTSVFAEALVQEAALDDKIVGITAAMPNGT 351

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            L    E FP R FDVG+AEQHAVTF+AGLA  G KPF  + S FLQRAYDQVV+DV  Q
Sbjct: 352 GLDKLAEAFPSRCFDVGIAEQHAVTFAAGLAAEGYKPFAALYSTFLQRAYDQVVHDVAIQ 411

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
            LPVRF I  AG VG+DGPT  G+FD  F++ LP  +VMA +DE EL  MV T  + D  
Sbjct: 412 GLPVRFPIDRAGFVGADGPTHAGSFDTAFLATLPGFVVMAAADEAELKHMVRTAVAYDAG 471

Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
           P+ FRYPRG  V  D+P  RG  ++IGKG+++ EG  VALL +G  + +CL A   L   
Sbjct: 472 PISFRYPRGEGVGVDMPA-RGEILQIGKGRIVKEGTKVALLSFGTRLADCLLAAEDLEAA 530

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 672
           G+  TVADARF KPLD  L+R+L ++H  LITVEEGS+GGFGS V  +++ +GLLD+G+K
Sbjct: 531 GLSTTVADARFAKPLDHDLIRQLARHHEMLITVEEGSVGGFGSQVMQYLSSEGLLDNGLK 590

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
            R +V+PD ++E A P    A AGL    I +T    LGR
Sbjct: 591 IRSLVMPDIWMEQAKPEAMNAHAGLDRAGIVSTVFRALGR 630


>gi|209548170|ref|YP_002280087.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium leguminosarum
           bv. trifolii WSM2304]
 gi|226801561|sp|B5ZS68.1|DXS_RHILW RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|209533926|gb|ACI53861.1| deoxyxylulose-5-phosphate synthase [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 638

 Score =  561 bits (1447), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 297/640 (46%), Positives = 402/640 (62%), Gaps = 22/640 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V  P  L+ L  ++L QLA E+R E+   VS+T   L + L  VELT+A+H VF
Sbjct: 7   TPLLDQVTYPADLRKLEDRDLPQLAREVRDEMIDAVSRTGGHLGAGLGVVELTIAIHSVF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D++++DVG Q Y HKILTGRR  I TLR++DG+SG+T R+ESEYDPF A H   S+
Sbjct: 67  DTPDDRLIFDVGHQCYPHKILTGRRDRIRTLRQEDGLSGFTRRAESEYDPFGAAHSSTSI 126

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMA+A D+      ++ VI +G   AG AYEA++NAG LD+ +IVILND+  S+ P
Sbjct: 127 SAGLGMAIAADLDKNDRRVIAVIGDGAMSAGMAYEALNNAGALDARLIVILNDNDMSIAP 186

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S+ L+R+ S +++   R+  K +T  +G+ +     +  E+ARG + 
Sbjct: 187 --------PTGAMSAYLARLASGRTYMGFRDFGKKLTAYLGKNIDRAITRAVEHARGYV- 237

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G T+FEE+G Y+IGP+DGH+ + L+ VL+ V    + GPVL+HVVT++ +       +
Sbjct: 238 -TGGTMFEEMGFYHIGPIDGHSFDHLLPVLRNVRD-NARGPVLIHVVTQKGK---GYPPA 292

Query: 379 EAIEKQQEGASDSNSLPFGNYSR------TYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
           EA   +  G +  + +  G  +R      +Y   F EALV EA  D  IV + A M    
Sbjct: 293 EAAADKYHGVNKFDVIT-GAQARVKPNAPSYTSVFAEALVQEATLDDKIVGITAAMPNGT 351

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            L    E FP R FDVG+AEQHAVTF+AGLA  G KPF  + S FLQRAYDQVV+DV  Q
Sbjct: 352 GLDKLAEAFPSRCFDVGIAEQHAVTFAAGLAAEGYKPFAALYSTFLQRAYDQVVHDVAIQ 411

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
            LPVRF I  AG VG+DGPT  G+FD  F++ LP  +VMA +DE EL  MV T  + D  
Sbjct: 412 GLPVRFPIDRAGFVGADGPTHAGSFDTAFLTTLPGFVVMAAADEAELKHMVRTAVAYDAG 471

Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
           P+ FRYPRG  V  D+P  RG  + IGKG+++ EG  VALL +G  + +CL A   L   
Sbjct: 472 PISFRYPRGEGVGVDMP-VRGEILRIGKGRIVKEGTKVALLSFGTRLADCLLAAEDLDAA 530

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 672
           G+  TVADARF KPLD  L+R+  ++H  +ITVEEGS+GGFGS V  +++ +GLLD+G+K
Sbjct: 531 GLSTTVADARFAKPLDHDLIRQFARHHEMVITVEEGSVGGFGSQVMQYLSSEGLLDNGLK 590

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
            R +V+PD ++E A P    A AGL    I +T    LGR
Sbjct: 591 IRSLVMPDIWMEQAKPEAMNAHAGLDRAGIVSTVFRALGR 630


>gi|67906635|gb|AAY82730.1| predicted 1-deoxy-d-xylulose-5-phosphate synthase [uncultured
           bacterium eBACmed86H08]
          Length = 635

 Score =  561 bits (1447), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 296/638 (46%), Positives = 397/638 (62%), Gaps = 26/638 (4%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
            LD V  P  +K+    EL  L+ E+R EL   VS T   L + L  +ELTVALH+VF  
Sbjct: 6   FLDNVNFPSDIKNFKSSELIALSKELREELIEAVSFTGGHLGAGLGVIELTVALHYVFDT 65

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P DKI+WDVG Q+Y HKILTGR++ I TLR+ DG+SG+T RSESEYDPF A H   S+SA
Sbjct: 66  PNDKIVWDVGHQSYPHKILTGRKNRIKTLRQGDGLSGFTKRSESEYDPFGAAHSSTSISA 125

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKI 260
            LG+A A  +  K E +V VI +G   AG AYEAM+NAG   + MIVILND+  S+    
Sbjct: 126 ALGIATANKLSKKSENVVAVIGDGAISAGMAYEAMNNAGTSKTKMIVILNDNDMSI---- 181

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQ 320
                  + A+ S L+++ + K +  LRE  K +     +   + A K +++ R  +   
Sbjct: 182 ----AEPVGAMRSYLAKLLTGKIYFSLRETFKLIISAFSKRFSKKAGKAEDFLRSAV--T 235

Query: 321 GSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRR---AEDTQ- 376
           G TLF  LG YY+GP+DGH+I+ L+SVL+        GP+++HV TE+ +    AE+++ 
Sbjct: 236 GGTLFNSLGFYYVGPIDGHDIDTLVSVLKNAKDTNFEGPIMIHVKTEKGKGYQFAENSKD 295

Query: 377 KSEAIEK--QQEGASDSNS--LPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
           K   + K   Q G  + +S  +P      +Y   F   L+  AE+D  I+ + A M    
Sbjct: 296 KYHGVSKFNVQTGVQEKSSSKIP------SYTSVFANTLIKHAERDSKIIGITAAMPSGT 349

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            + LF +KFP R FDVG+AEQHAVTFSAGLA  G KP+  I S FLQRAYDQVV+DV  Q
Sbjct: 350 GMDLFAKKFPNRMFDVGIAEQHAVTFSAGLATEGYKPYAAIYSTFLQRAYDQVVHDVAIQ 409

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
            LPVRF I  AGLVG+DGPT  G+FDIT++S LPN +VMAPSDE ELV M+ T   I+D+
Sbjct: 410 SLPVRFAIDRAGLVGADGPTHAGSFDITYLSTLPNFVVMAPSDESELVKMINTSVDINDK 469

Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
           P  FRYPRG  +   LP      IEIGKG+V+ EGK++AL+ +GA +Q C KA   L K 
Sbjct: 470 PSAFRYPRGTGIGIKLPEINE-KIEIGKGRVIKEGKEIALINFGARLQECQKALNNLEKK 528

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 672
           G+++T+ DARFCKPLD  L+    +NH  +I++EEGSIGGFGSH+S F++  GLL+  +K
Sbjct: 529 GLNLTLIDARFCKPLDENLMWNTAKNHEVVISIEEGSIGGFGSHLSKFLSEKGLLEK-IK 587

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
           +R +  PD +I+   P     +AGL    I      +L
Sbjct: 588 FRSMTFPDKFIDQDKPDLMYQIAGLDSKAIEEKVYEVL 625


>gi|86356559|ref|YP_468451.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium etli CFN 42]
 gi|118595609|sp|Q2KBR2.1|DXS_RHIEC RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|86280661|gb|ABC89724.1| 1-deoxy-D-xylulose-5-phosphate synthase protein [Rhizobium etli CFN
           42]
          Length = 638

 Score =  561 bits (1446), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 298/640 (46%), Positives = 406/640 (63%), Gaps = 22/640 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V  P  L+ L  ++L QLA E+R E+   VS+T   L + L  VELT+A+H VF
Sbjct: 7   TPLLDQVTYPADLRKLEDRDLPQLAREVRDEMIDAVSRTGGHLGAGLGVVELTIAIHSVF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D++++DVG Q Y HKILTGRR  I TLR+++G+SG+T R+ESEYDPF A H   S+
Sbjct: 67  DTPNDRLIFDVGHQCYPHKILTGRRDRIRTLRQENGLSGFTRRAESEYDPFGAAHSSTSI 126

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMA+A D++     ++ VI +G   AG AYEA++NAG LD+ +IVILND+  S+ P
Sbjct: 127 SAGLGMAIAADLEKTDRRVIAVIGDGAMSAGMAYEALNNAGALDARLIVILNDNDMSIAP 186

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S+ L+R+ S +++   R+  K +T  +G+ +     +  E+ARG + 
Sbjct: 187 --------PTGAMSAYLARLASGRTYMGFRDFGKKLTAYLGKNIDRAITRAVEHARGYV- 237

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G T+FEE+G Y+IGP+DGH+ + L+ VL+ V    + GPVL+HVVT++ +       +
Sbjct: 238 -TGGTMFEEMGFYHIGPIDGHSFDHLLPVLRNVRD-NARGPVLIHVVTQKGK---GYPPA 292

Query: 379 EAIEKQQEGASDSNSLPFGNYSR------TYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
           EA   +  G +  + +  G  +R      +Y   F EALV EA  D  IV + A M    
Sbjct: 293 EAAADKYHGVNKFDVIT-GAQARVKPNAPSYTSVFAEALVQEAALDDKIVGITAAMPNGT 351

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            L    E FP R FDVG+AEQHAVTF+AGLA  G KPF  + S FLQRAYDQVV+DV  Q
Sbjct: 352 GLDKLAEAFPSRCFDVGIAEQHAVTFAAGLAAEGYKPFAALYSTFLQRAYDQVVHDVAIQ 411

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
            LPVRF I  AG VG+DGPT  G+FD  F++ LP  +VMA +DE EL  MV T A+ D  
Sbjct: 412 GLPVRFPIDRAGFVGADGPTHAGSFDTAFLATLPGFVVMAAADEAELKHMVRTAAAYDAG 471

Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
           P+ FRYPRG  V  D+P  RG  ++IGKG+++ EG  VALL +G  + +CL A   L   
Sbjct: 472 PISFRYPRGEGVGVDMPA-RGEILQIGKGRIVKEGTKVALLSFGTRLADCLLASEDLEAA 530

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 672
           G+  TVADARF KPLD +L+R+L ++H  LITVEEGS+GGFGS V  +++ +GLLD+G+K
Sbjct: 531 GLSTTVADARFAKPLDHELLRQLARHHEMLITVEEGSVGGFGSQVMQYLSSEGLLDNGLK 590

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
            R +V+PD ++E A P    A AGL    I +T    L R
Sbjct: 591 IRSLVMPDIWMEQAKPEAMNAHAGLDRAGIVSTVFRALRR 630


>gi|400756076|ref|YP_006564444.1| 1-deoxy-D-xylulose-5-phosphate synthase [Phaeobacter gallaeciensis
           2.10]
 gi|398655229|gb|AFO89199.1| 1-deoxy-D-xylulose-5-phosphate synthase Dxs [Phaeobacter
           gallaeciensis 2.10]
          Length = 642

 Score =  561 bits (1446), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 303/651 (46%), Positives = 403/651 (61%), Gaps = 34/651 (5%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           D+  TP+LD +  P  LKSL+  +L Q+A E+R E  S VS T   L + L  VELT AL
Sbjct: 3   DRPQTPLLDQITRPADLKSLSDAQLTQVAQELRQETISAVSVTGGHLGAGLGVVELTTAL 62

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H VF  P DKI+WDV  Q Y HKILT RR  I TLR KDG+SG+T RSES +DPF A H 
Sbjct: 63  HAVFDTPRDKIIWDVSHQCYPHKILTSRRDRIRTLRMKDGLSGFTKRSESPFDPFGAAHS 122

Query: 195 CNSVSAGLGMAVARDIKG----KRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
             S+SA LG AVARD+ G         + VI +G+  AG A+EAM+NAG+L   +IVILN
Sbjct: 123 STSISAALGFAVARDLGGVVPEGLGDAIAVIGDGSMSAGMAFEAMNNAGHLGKRLIVILN 182

Query: 251 DSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVD 310
           D+  S+ P         + ALSS LSR+ + + F++L+ VAKG    +     E A +  
Sbjct: 183 DNEMSIAP--------PVGALSSYLSRLYAEEPFQELKAVAKGAASLLPEPFREGAKRAK 234

Query: 311 EYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR 370
           +  +GM    G TLFE LG  Y+GP+DGH+++ L+ VL+ V +  + GP+L+HV+T++ +
Sbjct: 235 DMLKGMA--VGGTLFESLGFSYLGPIDGHDMDQLLPVLRTVKARAT-GPILIHVLTKKGK 291

Query: 371 ------RAED----TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKD 420
                 RA D    T K + +  +Q+ A  +        + +Y   F + LV  A +D  
Sbjct: 292 GYAPAERARDKGHATAKFDMVTGEQKKAPSN--------APSYTSVFGKELVRLAAEDDK 343

Query: 421 IVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQR 480
           I  V A M     L L  E++P R FDVG+AEQH VTF+A LA GG+KPFC + S FLQR
Sbjct: 344 ICAVTAAMPDGTGLSLMAERYPSRCFDVGIAEQHGVTFAAALAAGGMKPFCAMYSTFLQR 403

Query: 481 AYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELV 540
            YDQVV+DV  QRLPVRF I  AGLVG+DG T  G+FDI +M+ LP M+VMA +DE EL 
Sbjct: 404 GYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGSFDIAYMANLPGMVVMAAADEAELA 463

Query: 541 DMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQ 600
            MVAT A+ DD P+ FRYPRG     D+P    + +EIGKG+++  GK VALL +G  + 
Sbjct: 464 HMVATAAAYDDGPIAFRYPRGEGEGVDMPEVPEV-LEIGKGRMIQNGKRVALLSFGTRLG 522

Query: 601 NCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHF 660
              KA   L+  GI  T+ADARF KPLD  L+  L  +H  LIT+EEG++GGFGSHV+  
Sbjct: 523 EVRKAAEALTAKGITPTIADARFAKPLDRDLILNLAASHDALITIEEGAVGGFGSHVAQL 582

Query: 661 IALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
           +A +G+ DSG+K+R +VLPD +I+ ASP     +A +    I A  L +LG
Sbjct: 583 LAEEGVFDSGLKYRSMVLPDTFIDQASPADMYTVAAMNAPQIEAKVLEVLG 633


>gi|222085096|ref|YP_002543626.1| 1-deoxy-D-xylulose-5-phosphate synthase [Agrobacterium radiobacter
           K84]
 gi|398382394|ref|ZP_10540482.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium sp. AP16]
 gi|254782056|sp|B9JAL7.1|DXS_AGRRK RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|221722544|gb|ACM25700.1| 1-deoxy-D-xylulose-5-phosphate synthase [Agrobacterium radiobacter
           K84]
 gi|397717559|gb|EJK78175.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium sp. AP16]
          Length = 638

 Score =  561 bits (1446), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 299/640 (46%), Positives = 406/640 (63%), Gaps = 20/640 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V  P  L+ L  ++L QLA E+R E+   VS+T   L + L  VELT+A+H+VF
Sbjct: 7   TPLLDQVHYPSDLRKLEDRDLPQLAREVRDEMIDAVSRTGGHLGAGLGVVELTIAIHNVF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D++++DVG Q Y HKILTGRR  I TLR++ GISG+T R+ESEYDPF A H   S+
Sbjct: 67  DTPNDRLIFDVGHQCYPHKILTGRRDRIRTLRQEGGISGFTRRAESEYDPFGAAHSSTSI 126

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVA D+      ++ VI +G   AG AYEA++NAG LD+ +IVILND+  S+ P
Sbjct: 127 SAGLGMAVAADLDKTDRRVIAVIGDGAMSAGMAYEALNNAGALDARLIVILNDNDMSIAP 186

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S+ L+R+ S +++   R++ K +T  +G+ +     +  E+ARG + 
Sbjct: 187 --------PTGAMSAYLARLASGRTYMGFRDLGKKLTAYLGKNVDRAITRAVEHARGYV- 237

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G T+FEE+G Y+IGP+DGH+ + L+ VL+ V    + GPVL+HVVT++ +       +
Sbjct: 238 -TGGTMFEEMGFYHIGPIDGHSFDHLLPVLRNVRD-NAQGPVLIHVVTQKGK---GYAPA 292

Query: 379 EAIEKQQEGASDSNSLPFGNY-----SRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
           EA   +  G +  + +          + +Y   F +ALV EA  D  IV + A M     
Sbjct: 293 EAAADKYHGVNKFDVITGAQAKVKPNAPSYTSVFADALVQEATFDDKIVGITAAMPSGTG 352

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L   QE FP+R FDVG+AEQHAVTF+AGLA  G KPF  + S FLQRAYDQVV+DV  Q 
Sbjct: 353 LDKLQEVFPKRCFDVGIAEQHAVTFAAGLAAEGFKPFAALYSTFLQRAYDQVVHDVAIQG 412

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPVRF I  AG VG+DGPT  G+FD TF++ LP  +VMA +DE EL  MV T A+ D  P
Sbjct: 413 LPVRFPIDRAGFVGADGPTHAGSFDTTFLATLPGFVVMAAADEAELKHMVRTAAAYDLGP 472

Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
           + FRYPRG  V  ++P  RG  +EIGKG+++ +G  VALL +G  + + L A   L   G
Sbjct: 473 ISFRYPRGEGVGIEMP-ERGQILEIGKGRIVKQGSKVALLSFGTRLADSLAAAEDLDAAG 531

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKW 673
           +  TVADARF KPLD  L+R+L  +H  LIT+EEGS+GGFGS V  F+A +GLLD+G+K 
Sbjct: 532 LPTTVADARFAKPLDHDLIRQLASHHEVLITIEEGSVGGFGSQVMQFLASEGLLDNGLKI 591

Query: 674 RPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRT 713
           R +V+PD ++E A P    A+AGL    I  T    LGR+
Sbjct: 592 RTLVMPDIWVEQAKPEVMNAMAGLDRAGIVQTVFKALGRS 631


>gi|302383898|ref|YP_003819721.1| deoxyxylulose-5-phosphate synthase [Brevundimonas subvibrioides
           ATCC 15264]
 gi|302194526|gb|ADL02098.1| deoxyxylulose-5-phosphate synthase [Brevundimonas subvibrioides
           ATCC 15264]
          Length = 638

 Score =  561 bits (1445), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 302/642 (47%), Positives = 402/642 (62%), Gaps = 16/642 (2%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V  P  ++     +L+QLA E+R+E    VS T   L + L  VELTVALHHV+
Sbjct: 4   TPLLDKVHVPADMRGFDAAQLRQLADELRAETIDAVSTTGGHLGAGLGVVELTVALHHVY 63

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D ++WDVG Q Y HKILTGRR  I TLR   G+SG+T RSESEYDPF A H   S+
Sbjct: 64  NTPDDILIWDVGHQCYPHKILTGRRDRIRTLRMGGGLSGFTKRSESEYDPFGAAHASTSI 123

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LG A ARD +GK+  +V VI +G+  AG AYEAM+NA      + VILND+  S+ P
Sbjct: 124 SAALGFAAARDQQGKQNKVVAVIGDGSMSAGMAYEAMNNAAETTGQLTVILNDNDMSIAP 183

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                    +  +S+ L++  S  +++  R+  + + + + R   E A K +EYARGM+ 
Sbjct: 184 P--------VGGMSAYLAKQVSGGAYQNFRKFGREVVQHMPRPFREAARKAEEYARGMV- 234

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRR---AEDT 375
             G T FEELG YYIGPVDGH++++L+ +L+  A++    PV+VHVVT++ +    AE +
Sbjct: 235 -VGGTFFEELGFYYIGPVDGHDMDNLVPILKNAAAITDR-PVVVHVVTQKGKGYAPAESS 292

Query: 376 QKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQ 435
                   + +  S   S    N + +Y   F   L+  A  D  IV + A M     L 
Sbjct: 293 ADKLHAVVKFDVVSGKQSKSVSN-APSYTKVFGTELIKRAAIDPSIVAITAAMPSGTGLD 351

Query: 436 LFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLP 495
           LF + +P+R +DVG+AEQHAVTF+AGLA  G+KPFC I S FLQR YDQVV+DV  Q+LP
Sbjct: 352 LFGQAYPKRTYDVGIAEQHAVTFAAGLAADGMKPFCAIYSTFLQRGYDQVVHDVAIQKLP 411

Query: 496 VRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVC 555
           VRF +  AGLVG+DG T  G+FDI +M  LP M++MA +DE +L  M+AT   IDDRP  
Sbjct: 412 VRFAMDRAGLVGADGSTHAGSFDIGYMGALPGMVLMAAADEADLAAMIATACEIDDRPSA 471

Query: 556 FRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGID 615
           FRYPRG  V  ++P     P+EIGKG+++ EG  VA+L +G  +Q  LKA  LL+  GI 
Sbjct: 472 FRYPRGDGVGVEIPEL-AAPLEIGKGRIVREGTAVAILSFGTRLQESLKAADLLAAHGIS 530

Query: 616 VTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWRP 675
            TVADARF KPLD  L+  L + H  LITVEEG++GGFG+ V  F+A +G LD+G+K R 
Sbjct: 531 ATVADARFAKPLDHDLITRLAREHEALITVEEGAMGGFGAFVLQFLASEGALDAGLKIRT 590

Query: 676 IVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREAL 717
           + LPD + +  SP  Q   AGL   HIAA AL  LG  + AL
Sbjct: 591 LHLPDVFQDQDSPAAQYVTAGLDADHIAAAALKALGVEKSAL 632


>gi|418296460|ref|ZP_12908303.1| 1-deoxy-D-xylulose-5-phosphate synthase [Agrobacterium tumefaciens
           CCNWGS0286]
 gi|355538635|gb|EHH07877.1| 1-deoxy-D-xylulose-5-phosphate synthase [Agrobacterium tumefaciens
           CCNWGS0286]
          Length = 639

 Score =  561 bits (1445), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 297/639 (46%), Positives = 402/639 (62%), Gaps = 20/639 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V  P  LK +  ++L +LA E+R E+   VSKT   L + L  VELT+A+H VF
Sbjct: 7   TPLLDRVNFPSDLKEIDDRDLPELARELRDEMIDAVSKTGGHLGAGLGVVELTIAIHKVF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D++++DVG Q Y HKILTGRR  I TLR++ G+SG+T R+ESEYD F AGH   S+
Sbjct: 67  NTPEDRLIFDVGHQCYPHKILTGRRERIRTLRQEGGLSGFTRRAESEYDDFGAGHSSTSI 126

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVA  +      ++ VI +G+  AG A+EA++NAG LD+ +IVILND+  S+ P
Sbjct: 127 SAGLGMAVAAGLDESDRKVIAVIGDGSMSAGMAFEALNNAGALDARLIVILNDNDMSIAP 186

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S+ L+R+ S +++   R+  K +T  +G+ +     +   +ARG + 
Sbjct: 187 --------PTGAMSAYLARLASGRTYMGFRDFGKKLTAYLGKTIDRAITRAVTHARGYV- 237

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G TLFEELG Y+IGP+DGH+ + L+ VL+ V      GPVL+HVVT++ +       +
Sbjct: 238 -TGGTLFEELGFYHIGPIDGHSFDHLLPVLRNVRD-NQKGPVLIHVVTQKGK---GYAPA 292

Query: 379 EAIEKQQEGASDSNSLPFGNY-----SRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
           EA   +  G +  + +          + +Y   F EAL+ EA  D  I+ V A M     
Sbjct: 293 EAAADKYHGVNKFDVITGAQAKAKPNAPSYTSVFAEALIQEATLDDKIIGVTAAMPNGTG 352

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L    E FP R FDVG+AEQHAVTF+AGLA  G KPFC + S FLQR YDQ+V+DV  Q 
Sbjct: 353 LDKMAELFPSRTFDVGIAEQHAVTFAAGLAADGYKPFCALYSTFLQRGYDQLVHDVAIQS 412

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPVRF I  AG VG+DGPT  G+FD TF++ LP M+VMA +DE EL  MV T A+ D+ P
Sbjct: 413 LPVRFPIDRAGFVGADGPTHAGSFDTTFLATLPGMVVMAAADEAELKHMVRTAAAYDEGP 472

Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
           + FRYPRG  V  ++P  RG  +EIGKG+++ EG  VALL +G  +  CL A   L   G
Sbjct: 473 ISFRYPRGEGVGVEMPA-RGEILEIGKGRIIKEGTKVALLSFGTRLAECLAAAEDLDAAG 531

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKW 673
           +  TVADARF KPLD+ L+R+L  +H  L+T+EEGS+GGFG+HV HF+A  GLLD G K 
Sbjct: 532 LSTTVADARFAKPLDLDLIRQLAAHHEVLVTIEEGSVGGFGAHVLHFMASAGLLDHGPKV 591

Query: 674 RPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
           R + LPD ++E A P    A AGL    I +T  + LG+
Sbjct: 592 RTLTLPDQWVEQAKPETMYANAGLDRAGIVSTVFNALGQ 630


>gi|417859093|ref|ZP_12504150.1| 1-deoxy-D-xylulose 5-phosphate synthase [Agrobacterium tumefaciens
           F2]
 gi|338825097|gb|EGP59064.1| 1-deoxy-D-xylulose 5-phosphate synthase [Agrobacterium tumefaciens
           F2]
          Length = 636

 Score =  561 bits (1445), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 297/639 (46%), Positives = 402/639 (62%), Gaps = 20/639 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V  P  LK +  ++L +LA E+R E+   VSKT   L + L  VELT+A+H VF
Sbjct: 4   TPLLDRVNFPSDLKEIDDRDLPELARELRDEMIDAVSKTGGHLGAGLGVVELTIAIHKVF 63

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D++++DVG Q Y HKILTGRR  I TLR++ G+SG+T R+ESEYD F AGH   S+
Sbjct: 64  NTPEDRLIFDVGHQCYPHKILTGRRERIRTLRQEGGLSGFTRRAESEYDDFGAGHSSTSI 123

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVA  +      ++ VI +G+  AG A+EA++NAG LD+ +IVILND+  S+ P
Sbjct: 124 SAGLGMAVAAGLDESDRKVIAVIGDGSMSAGMAFEALNNAGALDARLIVILNDNDMSIAP 183

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S+ L+R+ S +++   R+  K +T  +G+ +     +   +ARG + 
Sbjct: 184 --------PTGAMSAYLARLASGRTYMGFRDFGKKLTAYLGKTIDRAITRAVTHARGYV- 234

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G TLFEELG Y+IGP+DGH+ + L+ VL+ V      GPVL+HVVT++ +       +
Sbjct: 235 -TGGTLFEELGFYHIGPIDGHSFDHLLPVLRNVRD-NQKGPVLIHVVTQKGK---GYAPA 289

Query: 379 EAIEKQQEGASDSNSLPFGNY-----SRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
           EA   +  G +  + +          + +Y   F EAL+ EA  D  I+ V A M     
Sbjct: 290 EAAADKYHGVNKFDVITGAQAKAKPNAPSYTSVFAEALIQEATLDDKIIGVTAAMPNGTG 349

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L    E FP R FDVG+AEQHAVTF+AGLA  G KPFC + S FLQR YDQ+V+DV  Q 
Sbjct: 350 LDKMAELFPSRTFDVGIAEQHAVTFAAGLAADGYKPFCALYSTFLQRGYDQLVHDVAIQS 409

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPVRF I  AG VG+DGPT  G+FD TF++ LP M+VMA +DE EL  MV T A+ D+ P
Sbjct: 410 LPVRFPIDRAGFVGADGPTHAGSFDTTFLATLPGMVVMAAADEAELKHMVRTAAAYDEGP 469

Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
           + FRYPRG  V  ++P  RG  +EIGKG+++ EG  VALL +G  +  CL A   L   G
Sbjct: 470 ISFRYPRGEGVGVEMPA-RGEILEIGKGRIIKEGTKVALLSFGTRLAECLAAAEDLDAAG 528

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKW 673
           +  TVADARF KPLD+ L+R+L  +H  L+T+EEGS+GGFG+HV HF+A  GLLD G K 
Sbjct: 529 LSTTVADARFAKPLDLDLIRQLASHHEVLVTIEEGSVGGFGAHVLHFMASAGLLDHGPKV 588

Query: 674 RPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
           R + LPD ++E A P    A AGL    I +T  + LG+
Sbjct: 589 RTLTLPDQWVEQAKPETMYANAGLDRAGIVSTVFNALGQ 627


>gi|383642490|ref|ZP_09954896.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingomonas elodea ATCC
           31461]
          Length = 641

 Score =  561 bits (1445), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 309/656 (47%), Positives = 402/656 (61%), Gaps = 35/656 (5%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           D   TP+LD V+ P  L+ L   +L+QLA E+R+E  S V  T   L S L  VELTVA+
Sbjct: 3   DLPKTPLLDTVDTPQDLRKLAPAQLRQLADELRAETISAVGSTGGHLGSGLGVVELTVAI 62

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H+VF+ P D+++WDVG Q Y HKILTGRR+ I T+R+  G+SG+T RSESE+DPF A H 
Sbjct: 63  HYVFNTPDDRLIWDVGHQCYPHKILTGRRNRIRTIRQGGGLSGFTKRSESEFDPFGAAHS 122

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA LG A A  +KG     + VI +G   AG AYEAM+NA    + +IVILND+  
Sbjct: 123 STSISAALGFATANKLKGAPGKAIAVIGDGAMSAGMAYEAMNNAEAAGNRLIVILNDNDM 182

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+ P         +  LS+ L+R+ SS  +  LR +A+ +T+++ R +   A K +E+AR
Sbjct: 183 SIAP--------PVGGLSAYLARLISSSEYLGLRSLARRVTQKVSRRLTAAAGKAEEFAR 234

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---- 370
           GM    G TLFEELG YY+GP+DGHN+E LI VL+ V      GP+LVHVVT++ +    
Sbjct: 235 GMA--TGGTLFEELGFYYVGPIDGHNLEHLIPVLENVRD-AEQGPILVHVVTKKGKGYAP 291

Query: 371 --RAED----TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVV 424
             +A D     QK + I   Q  A      P G     Y   F +AL+ EAE+D  +  +
Sbjct: 292 AEKAADKYHGVQKFDVITGAQAKA------PPG--PPAYTKVFADALLAEAERDATVCAI 343

Query: 425 HAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQ 484
            A M     L  FQ  FPER FDVG+AEQHAVTF+AGLA  G++PFC I S FLQRAYDQ
Sbjct: 344 TAAMPSGTGLDKFQAMFPERTFDVGIAEQHAVTFAAGLAAQGMRPFCAIYSTFLQRAYDQ 403

Query: 485 VVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVA 544
           VV+DV  Q LPVRF I  AGLVG+DG T  G+FD+T+++ LPN +VMA +DE ELV M  
Sbjct: 404 VVHDVAIQNLPVRFAIDRAGLVGADGATHAGSFDVTYLASLPNFVVMAAADEVELVHMTH 463

Query: 545 TVASIDDRPVCFRYPRGAIVRTDLPGYRGIP--IEIGKGKVLVEGKDVALLGYGAMVQNC 602
           T A  D  P+  RYPRG  +  +LP    +P  +EIGKG+V+ EGK VA+L  G  +   
Sbjct: 464 TAALHDSGPIALRYPRGNGIGLELP---KVPERLEIGKGRVVREGKKVAILSLGTRLAEA 520

Query: 603 LKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIA 662
           LKA   L   G+  TVAD RF KPLD  L+R L   H   +T+EEG+IGG G+HV    +
Sbjct: 521 LKAADTLEAKGLSTTVADLRFAKPLDEDLIRRLLTTHEVAVTIEEGAIGGLGAHVLTLAS 580

Query: 663 LDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALL 718
             GL+D+G+K R + LPD + +   P +Q   AGL   HI  T L  L R  EA L
Sbjct: 581 DTGLIDAGLKLRTMRLPDMFQDQDKPEKQYDEAGLNAAHIVDTVLKAL-RYNEAEL 635


>gi|87198187|ref|YP_495444.1| 1-deoxy-D-xylulose-5-phosphate synthase [Novosphingobium
           aromaticivorans DSM 12444]
 gi|118595595|sp|Q2GC13.1|DXS_NOVAD RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|87133868|gb|ABD24610.1| 1-deoxy-D-xylulose-5-phosphate synthase [Novosphingobium
           aromaticivorans DSM 12444]
          Length = 640

 Score =  561 bits (1445), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 301/648 (46%), Positives = 403/648 (62%), Gaps = 35/648 (5%)

Query: 76  KEP-TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           +EP TP+LD V+ P  L+ L   +L+QLA E+R E+ S V +T   L S L  VELTVA+
Sbjct: 3   QEPATPLLDTVKTPDDLRKLAPTQLRQLADELRVEMISAVGQTGGHLGSGLGVVELTVAI 62

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H+VF+ P D+++WDVG Q Y HKILTGRR  I TLR+  G+SG+T RSESEYDPF   H 
Sbjct: 63  HYVFNTPEDRLVWDVGHQAYPHKILTGRRDRIRTLRQAGGLSGFTKRSESEYDPFGTAHS 122

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA LG A+A  + G+    + VI +G   AG AYEAM+NA    + +IVILND+  
Sbjct: 123 STSISAALGFAIANKLSGRLGKGIAVIGDGAMSAGMAYEAMNNAEAAGNRLIVILNDNDM 182

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+ P         +  LS+ L+R+ SS  F  LR++A+ +++++ R +HE A K DE+AR
Sbjct: 183 SIAP--------PVGGLSAYLARLVSSGPFLGLRDIARRLSRKLPRPLHEAARKTDEFAR 234

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---- 370
           GM    G TLFEELG YY+GP+DGHNI+ LI VL+ V    + GP L+HVVT++ +    
Sbjct: 235 GMA--MGGTLFEELGFYYVGPIDGHNIDQLIPVLENVRD-AAEGPCLIHVVTQKGKGYAP 291

Query: 371 ------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVV 424
                 +    QK + I  +Q  A  +        +  Y + F E L   A+ D  I  +
Sbjct: 292 AEAAADKYHGVQKFDVITGEQVKAKAA--------APAYQNVFGETLAKLADADPTICAI 343

Query: 425 HAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQ 484
            A M     +  F +  P+R FDVG+AEQHAVTF+AGLA  G++PFC I S FLQRA+DQ
Sbjct: 344 TAAMPSGTGVDKFAKAHPDRTFDVGIAEQHAVTFAAGLAAEGMRPFCAIYSTFLQRAFDQ 403

Query: 485 VVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVA 544
           VV+DV  Q LPVRF I  AGLVG+DG T  G+FD+T+++ LPN++VMA +DE ELV M  
Sbjct: 404 VVHDVAIQNLPVRFAIDRAGLVGADGATHAGSFDVTYLATLPNLVVMAAADEAELVHMTY 463

Query: 545 TVASIDDRPVCFRYPRGAIVRTDLPGYRGIP--IEIGKGKVLVEGKDVALLGYGAMVQNC 602
           T A  D  P+ FRYPRG  V   LP    +P  +EIGKG+++ +G  VALL  G  +   
Sbjct: 464 TAALHDSGPIAFRYPRGNGVGVPLP---EVPERLEIGKGRIIRQGSKVALLSLGTRLAEA 520

Query: 603 LKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIA 662
           LKA   L   G+  TVAD RF KPLD+ L+R+L   H  ++TVEEGSIGG G+HV    +
Sbjct: 521 LKAADQLDARGLSTTVADLRFAKPLDVALIRQLMTTHDVIVTVEEGSIGGLGAHVLTMAS 580

Query: 663 LDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
            +GL+D G+K R + LPD + +H +P +Q   AGL   HI  T L  L
Sbjct: 581 DEGLVDGGLKIRTMRLPDLFQDHDAPEKQYDEAGLNAPHIVDTVLKAL 628


>gi|162147644|ref|YP_001602105.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209542273|ref|YP_002274502.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|161786221|emb|CAP55803.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209529950|gb|ACI49887.1| deoxyxylulose-5-phosphate synthase [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 667

 Score =  561 bits (1445), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 303/653 (46%), Positives = 406/653 (62%), Gaps = 35/653 (5%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+LD V  P  L++L++++LKQLA E+R+E    VS T   L +SL  VELTVALH VF 
Sbjct: 21  PLLDRVAYPEDLRNLSVEQLKQLAEELRAETVDAVSTTGGHLGASLGVVELTVALHAVFD 80

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG Q Y HKILTGRR  I TLR+  G+SG+T R ESEYDPF A H   S+S
Sbjct: 81  TPADRVIWDVGHQAYPHKILTGRRERIRTLRQPGGLSGFTRRCESEYDPFGAAHSSTSIS 140

Query: 200 AGLGMAVARDIKG------KRECIVTVISNGTTMAGQAYEAMSNA---GYLDSNMIVILN 250
           AGLGMAVA  ++       +   +V VI +G+  AG AYEAM+NA   G     +IV+LN
Sbjct: 141 AGLGMAVAHHLRAEHDPAYRERNVVAVIGDGSISAGMAYEAMNNASVAGPGAGRLIVVLN 200

Query: 251 DSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVD 310
           D+  S+ P +         A+S+ LSR+ SS+ F  LR++A  + +R+   +   A K D
Sbjct: 201 DNEMSIAPPV--------GAMSNYLSRLMSSRQFLGLRDLAGKVARRLPERLERTAKKAD 252

Query: 311 EYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR 370
           EYARGMI   G TLFEELG YY+GPVDGH++  L+ +L+ +      GP+L+H++TE+ R
Sbjct: 253 EYARGMI--TGGTLFEELGFYYVGPVDGHDLNQLVPILRNLRDADDKGPILLHILTEKGR 310

Query: 371 RAEDTQ----KSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHA 426
                +    K  A+ K      +    P G  S  Y   F   LV  A++D  IV V A
Sbjct: 311 GYRPAESAGDKYHAVAKFNVVTGEQKKAPPGPPS--YTSVFSRELVRRAKQDDTIVAVTA 368

Query: 427 GMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVV 486
            M     L  F    P+R+FDVG+AEQHAVTF+AG+A  GL+PFC I S FLQRAYDQV+
Sbjct: 369 AMPSGTGLDAFARACPDRFFDVGIAEQHAVTFAAGMATEGLRPFCAIYSTFLQRAYDQVM 428

Query: 487 NDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATV 546
           +DV  Q LPVRF I  AGLVG+DG T  GAFDI ++ CLP M +MAPSDE EL+ M AT 
Sbjct: 429 HDVVLQNLPVRFAIDRAGLVGADGATHAGAFDINYLGCLPGMTIMAPSDELELLHMTATA 488

Query: 547 ASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVE-----GKD---VALLGYGAM 598
            + D  P+  RYPRG  +   LP   G  +EIG+G+++ E     G++   +A+L  G  
Sbjct: 489 CAFDAGPIALRYPRGNGLGLALP-EAGEILEIGRGRIIREMGRQSGRETGGIAILSLGTR 547

Query: 599 VQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVS 658
           +   LKA  +L+  G+  TVADARF KPLD  L+  L +NH  L+T+E+G+ GGFG++V 
Sbjct: 548 LAEVLKAADMLAAQGLAPTVADARFAKPLDTALIENLARNHAVLLTIEDGAEGGFGAYVM 607

Query: 659 HFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
           H +A  GLLD+ +++RP+ LPD +I+H +   Q   AGL    IAA A+  LG
Sbjct: 608 HHLARTGLLDT-IRFRPMTLPDRFIDHNTQDAQYHQAGLDAPAIAACAMQALG 659


>gi|347757576|ref|YP_004865138.1| 1-deoxy-D-xylulose-5-phosphate synthase [Micavibrio aeruginosavorus
           ARL-13]
 gi|347590094|gb|AEP09136.1| 1-deoxy-D-xylulose-5-phosphate synthase [Micavibrio aeruginosavorus
           ARL-13]
          Length = 629

 Score =  560 bits (1444), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 296/633 (46%), Positives = 397/633 (62%), Gaps = 19/633 (3%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           D     +L+ V  P  ++  T  +LKQLA E+R+E+   VS T   L + L  VELTVA+
Sbjct: 3   DNSANTLLNNVVVPDDIRDFTDDQLKQLAEEVRAEMIDAVSHTGGHLGAGLGVVELTVAI 62

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H VF+ P D+++WDVG Q Y HKILTGRR  I TLR+  G+SG+T RSESEYDPF A H 
Sbjct: 63  HAVFNTPDDRLIWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTKRSESEYDPFGAAHS 122

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SAGLGMAVARD  GK   ++ VI +G+  AG AYEAM+NAG   S +IVILND+  
Sbjct: 123 STSISAGLGMAVARDQLGKDNHVICVIGDGSMTAGMAYEAMNNAGDAKSRLIVILNDNDM 182

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+ P         + ALS  L+R+ SSK + Q RE  K +T+ +   +     + +E AR
Sbjct: 183 SIAP--------PVGALSKHLTRLVSSKRYMQARETGKKVTEILPPPLRHAVKRAEESAR 234

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAED 374
             +G    +LFEE+G YYIGPVDGHN++ L+ +++ +      GPVL+H +T   ++ + 
Sbjct: 235 TAMGT--GSLFEEMGFYYIGPVDGHNLDQLLPIMRNLRDGAHEGPVLIHAIT---KKGKG 289

Query: 375 TQKSEAIEKQQEGASDSNSLPFGNYSR-----TYDDCFIEALVMEAEKDKDIVVVHAGME 429
              +E+   +  G    + +    +        Y   F ++L+ EA  D  IV +   M 
Sbjct: 290 YAPAESSADKMHGVVKFDVVTGAQHKSKPSAPAYTKVFAQSLIEEARHDSRIVAITGAMP 349

Query: 430 MDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDV 489
               L LF+ +FP+R FDVG+AEQHAVTF+AG+A  GLKPFC I S FLQRAYDQVV+DV
Sbjct: 350 SGTGLDLFEREFPDRMFDVGIAEQHAVTFAAGMATEGLKPFCAIYSTFLQRAYDQVVHDV 409

Query: 490 DQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASI 549
             Q LPVRF +  AGLVG+DG T  GAFD+ +M CLPNM++MA  DE EL+ MVAT+A+ 
Sbjct: 410 CIQNLPVRFAMDRAGLVGADGSTHAGAFDVAYMGCLPNMVLMAAGDEVELMHMVATMAAY 469

Query: 550 DDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALL 609
           D  P+  RYPRG  +  DLP  RG  +EIGKG+V+ EG DVA+L YG  +   LKA   L
Sbjct: 470 DAGPIGLRYPRGEGMGIDLPA-RGFVLEIGKGRVVREGNDVAILSYGTRLGEALKAADAL 528

Query: 610 SKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDS 669
           ++ GI  TVADARF KPLD  L+ +L  +H+ LIT+EEGSIGGFGS+   ++   GLLD 
Sbjct: 529 AERGISATVADARFAKPLDTALITQLANHHSKLITIEEGSIGGFGSYTLEYMNDAGLLDG 588

Query: 670 GVKWRPIVLPDNYIEHASPTQQLALAGLTGHHI 702
             + + + LPD + +  +P +Q   AGL    I
Sbjct: 589 RCRVKTMHLPDLFQDQDTPDKQYDEAGLNAKQI 621


>gi|399076032|ref|ZP_10751806.1| 1-deoxy-D-xylulose-5-phosphate synthase [Caulobacter sp. AP07]
 gi|398037908|gb|EJL31084.1| 1-deoxy-D-xylulose-5-phosphate synthase [Caulobacter sp. AP07]
          Length = 638

 Score =  560 bits (1443), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 298/643 (46%), Positives = 393/643 (61%), Gaps = 30/643 (4%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V +P   +  +I ELKQLA E+R+E    VS T   L + L  VELTVALHHVF
Sbjct: 5   TPLLDTVSSPADTRGFSIAELKQLASEVRAETIDAVSVTGGHLGAGLGVVELTVALHHVF 64

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D ++WDVG Q Y HKILTGRR  I TLR+  G+SG+T R+ESEYDPF A H   S+
Sbjct: 65  ETPKDIVIWDVGHQAYPHKILTGRRDRIRTLRQGGGLSGFTKRAESEYDPFGAAHAATSI 124

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LG   ARD KG+   ++ VI +G+  AG AYEAM+ A      +IVILND+  S+ P
Sbjct: 125 SAALGFCAARDAKGESNSVIAVIGDGSMSAGMAYEAMNAAVDTTKRLIVILNDNDMSIAP 184

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                    +  +S+ L+ + S  ++R++R++ K + +++   + + A K +EYARGM+ 
Sbjct: 185 --------PVGGMSAYLANLVSGGAYRKVRKLGKTVVEKLPSPIRDAARKAEEYARGMV- 235

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR------RA 372
             G T FEELG +Y+GP+DGH+++ L+SVL          PVLVHVVT++ +       A
Sbjct: 236 -TGGTFFEELGFHYVGPIDGHDMDALVSVLNNAKHFDEK-PVLVHVVTQKGKGYAPAEGA 293

Query: 373 ED----TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGM 428
           +D      K + +  QQ  A+            +Y   F + L+  A  D  IV + A M
Sbjct: 294 DDKLHAVVKFDVVTGQQHKAAAGPP--------SYTKVFAQELIKHAAVDDKIVAITAAM 345

Query: 429 EMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVND 488
                L LF + +P R FDVG+AEQHAVTF+AGLA  G+KPF  I S FLQR YDQVV+D
Sbjct: 346 PSGTGLDLFGKAYPHRTFDVGIAEQHAVTFAAGLAADGMKPFAAIYSTFLQRGYDQVVHD 405

Query: 489 VDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVAS 548
           V  QRLPVRF +  AGLVG+DGPT  G FD+ FM  LP M++MA +DE EL  MVAT   
Sbjct: 406 VAIQRLPVRFAMDRAGLVGADGPTHAGTFDLGFMGALPGMVLMAAADELELAHMVATAVE 465

Query: 549 IDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARAL 608
           IDDRP  FRYPRG  +   LP     P+EIGKG+++ EG  VA++  G  +  CLKA  L
Sbjct: 466 IDDRPSAFRYPRGEGLGLTLPDL-AAPLEIGKGRIVREGTSVAIVSLGTRLAECLKAADL 524

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLD 668
           L+  G+  TVADARF KPLD+ ++  L + H  +ITVEEG++GGFG+ V   +A  G LD
Sbjct: 525 LAARGLSATVADARFAKPLDVDMLLRLAREHEAIITVEEGAMGGFGAFVLQALAQHGALD 584

Query: 669 SGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
            G+K R +VLPD + +   P    A AGL    I   ALS LG
Sbjct: 585 RGLKIRTLVLPDIFQDQDKPDVMYAQAGLDAEGILRGALSALG 627


>gi|114765816|ref|ZP_01444909.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pelagibaca bermudensis
           HTCC2601]
 gi|114541815|gb|EAU44852.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseovarius sp. HTCC2601]
          Length = 641

 Score =  560 bits (1443), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 305/645 (47%), Positives = 395/645 (61%), Gaps = 22/645 (3%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           D   TP+LD V +P  LK  +  EL+Q+A E+R E  + VS+T   L + L  +ELTVAL
Sbjct: 3   DSPQTPLLDRVSSPADLKRFSDAELEQVAHELRDETIAAVSETGGHLGAGLGVIELTVAL 62

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H VF  P DK++WDV  Q Y HKILTGRR  I TLRKK G+SG+T RSES YDPF AGH 
Sbjct: 63  HAVFDTPRDKVIWDVSHQAYPHKILTGRRDRIRTLRKKGGLSGFTKRSESPYDPFGAGHS 122

Query: 195 CNSVSAGLGMAVARDIKGKREC----IVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
             S+SA LG AVARD+ G  +      + VI +G   AG AYEAM+NAG+L   +IVILN
Sbjct: 123 STSISAALGFAVARDLGGVCDTGAGDAIAVIGDGAMSAGMAYEAMNNAGHLGKRLIVILN 182

Query: 251 DSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVD 310
           D+  S+ P           A+SS LSR+ + + F+ L+  AKG    +     E A +  
Sbjct: 183 DNEMSIAP--------PTGAMSSYLSRLYAEEPFQDLKAAAKGAVSLLPPPFREGAKRAK 234

Query: 311 EYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR 370
           E  +GM    G TLFEELG  Y+GP+DGH++  L+ VL+ V +  +  P+L+HV+T++ +
Sbjct: 235 EMLKGMT--VGGTLFEELGFDYLGPLDGHDLHQLLPVLRMVRARANK-PILLHVLTKKGK 291

Query: 371 ----RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHA 426
                 E   +  A  K      +    P  + +  Y   F + L   A +D  I  V A
Sbjct: 292 GYGPAEESADRGHARAKFDVATGEQKKAP--SNAPAYTKVFAKELTRLAAEDSRICAVTA 349

Query: 427 GMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVV 486
            M     L L  E++P R FDVG+AEQH VTF+AGLA GG+KPFC + S FLQR YDQVV
Sbjct: 350 AMPDGTGLDLMAERYPSRVFDVGIAEQHGVTFAAGLAAGGMKPFCAMYSTFLQRGYDQVV 409

Query: 487 NDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATV 546
           +DV  QRLPVRF I  AGLVG+DG T  GA+DI FM+ LP M+VMA +DE EL  MVAT 
Sbjct: 410 HDVAIQRLPVRFAIDRAGLVGADGATHAGAYDIAFMANLPGMVVMAAADEAELKHMVATA 469

Query: 547 ASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
           A+ D+ P+ FRYPRG     ++P   G  +EIG+G+++ EGK VALL +G  +    KA 
Sbjct: 470 AAHDEGPIAFRYPRGEGEGVEMP-EAGEILEIGRGRIVSEGKRVALLSFGTRLGEVRKAC 528

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGL 666
             LS  GI  TVADARF KPLD  L   L   H  LIT+EEGS+GGFGSHV+  ++ +G+
Sbjct: 529 EKLSARGITPTVADARFAKPLDRDLTLRLAAEHEALITIEEGSVGGFGSHVAQLLSDEGV 588

Query: 667 LDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
            D G+K+R +VLPD +I+HASP      AGL   HI    L+ LG
Sbjct: 589 FDHGLKFRSMVLPDTFIDHASPDDMYESAGLDARHIEEKVLTTLG 633


>gi|209543457|ref|YP_002275686.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209531134|gb|ACI51071.1| deoxyxylulose-5-phosphate synthase [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 704

 Score =  560 bits (1443), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 302/653 (46%), Positives = 406/653 (62%), Gaps = 35/653 (5%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+LD V  P  L++L++++LKQLA E+R+E    VS T   L +SL  VELTVALH VF 
Sbjct: 48  PLLDRVAYPEDLRNLSVEQLKQLAEELRAETVDAVSTTGGHLGASLGVVELTVALHAVFD 107

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG Q Y HKILTGRR  I TLR+  G+SG+T R ESEYDPF A H   S+S
Sbjct: 108 TPADRVIWDVGHQAYPHKILTGRRERIRTLRQPGGLSGFTRRCESEYDPFGAAHSSTSIS 167

Query: 200 AGLGMAVARDIKG------KRECIVTVISNGTTMAGQAYEAMSNA---GYLDSNMIVILN 250
           AGLGMAVA  ++       +   +V VI +G+  AG AYEAM+NA   G     +IV+LN
Sbjct: 168 AGLGMAVAHHLRAEHDPAYRERNVVAVIGDGSISAGMAYEAMNNASVAGPGAGRLIVVLN 227

Query: 251 DSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVD 310
           D+  S+ P +         A+S+ LSR+ SS+ F  LR++A  + +R+   +   A K D
Sbjct: 228 DNEMSIAPPV--------GAMSNYLSRLMSSRQFLGLRDLAGKVARRLPERLERTAKKAD 279

Query: 311 EYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR 370
           EYARGMI   G TLFEELG YY+GPVDGH++  L+ +L+ +      GP+L+H++TE+ R
Sbjct: 280 EYARGMI--TGGTLFEELGFYYVGPVDGHDLNQLVPILRNLRDADDKGPILLHILTEKGR 337

Query: 371 RAEDTQ----KSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHA 426
                +    K  A+ K      +    P G  S  Y   F   LV  A++D  +V V A
Sbjct: 338 GYRPAESAGDKYHAVAKFNVVTGEQKKAPPGPPS--YTSVFSRELVRRAKQDDTLVAVTA 395

Query: 427 GMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVV 486
            M     L  F    P+R+FDVG+AEQHAVTF+AG+A  GL+PFC I S FLQRAYDQV+
Sbjct: 396 AMPSGTGLDAFARACPDRFFDVGIAEQHAVTFAAGMATEGLRPFCAIYSTFLQRAYDQVM 455

Query: 487 NDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATV 546
           +DV  Q LPVRF I  AGLVG+DG T  GAFDI ++ CLP M +MAPSDE EL+ M AT 
Sbjct: 456 HDVVLQNLPVRFAIDRAGLVGADGATHAGAFDINYLGCLPGMTIMAPSDELELLHMTATA 515

Query: 547 ASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVE-----GKD---VALLGYGAM 598
            + D  P+  RYPRG  +   LP   G  +EIG+G+++ E     G++   +A+L  G  
Sbjct: 516 CAFDAGPIALRYPRGNGLGLALP-EAGEILEIGRGRIIREMGRQSGRETGGIAILSLGTR 574

Query: 599 VQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVS 658
           +   LKA  +L+  G+  TVADARF KPLD  L+  L +NH  L+T+E+G+ GGFG++V 
Sbjct: 575 LAEVLKAADMLAAQGLAPTVADARFAKPLDTALIENLARNHAVLLTIEDGAEGGFGAYVM 634

Query: 659 HFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
           H +A  GLLD+ +++RP+ LPD +I+H +   Q   AGL    IAA A+  LG
Sbjct: 635 HHLARTGLLDT-IRFRPMTLPDRFIDHNTQDAQYHQAGLDAPAIAACAMQALG 686


>gi|347759880|ref|YP_004867441.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconacetobacter xylinus
           NBRC 3288]
 gi|347578850|dbj|BAK83071.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconacetobacter xylinus
           NBRC 3288]
          Length = 663

 Score =  560 bits (1443), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 304/653 (46%), Positives = 410/653 (62%), Gaps = 35/653 (5%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P LD V  P  +++L++++LKQLA E+R+E    VS T   L +SL  VELTVALH VF 
Sbjct: 17  PQLDRVRAPHDMRNLSVEQLKQLADELRAETIDAVSTTGGHLGASLGVVELTVALHAVFD 76

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG Q Y HKILTGRR  I TLR+  G+SG+T RSESEYDPF A H   S+S
Sbjct: 77  TPDDRVIWDVGHQAYPHKILTGRRERIRTLRQPGGLSGFTRRSESEYDPFGAAHSSTSIS 136

Query: 200 AGLGMAVARDIKG------KRECIVTVISNGTTMAGQAYEAMSNAGYLD---SNMIVILN 250
           AGLGMAVA  ++       +   ++ VI +G+  AG AYEAM+NA +       +IV+LN
Sbjct: 137 AGLGMAVAHHLRAEEDPAYRERNVIAVIGDGSISAGMAYEAMNNASHCGPGAERLIVVLN 196

Query: 251 DSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVD 310
           D+  S+ P +         A+S+ LSR+ SS+ F  LRE+A  M KR+   +   A K D
Sbjct: 197 DNEMSIAPPV--------GAMSNYLSRLMSSRKFLSLRELAAKMAKRLPGRLERTAKKAD 248

Query: 311 EYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR 370
           EYARG++   G TLFEELG YY+GPVDGH++  L+ +L+ +     +GPVL+HV+TE+  
Sbjct: 249 EYARGIM--TGGTLFEELGFYYVGPVDGHDMNQLVHILRNLRDAEDVGPVLLHVITEKGH 306

Query: 371 RAEDTQ----KSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHA 426
                +    K  A+ K      +    P G  S  Y   F + LV +A  D  IV + A
Sbjct: 307 GYTPAESAGDKYHAVSKFNVVTGEQKKGPSGPPS--YTSVFAKELVRQAATDDRIVTITA 364

Query: 427 GMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVV 486
            M     L  F + +P+R+FDVG+AEQHAVTF+AG+A  GL+PFC I S+FLQRAYDQV+
Sbjct: 365 AMPSGTGLDKFAKAYPDRFFDVGIAEQHAVTFAAGMATEGLRPFCAIYSSFLQRAYDQVM 424

Query: 487 NDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATV 546
           +DV  Q+LPVRF I  AGLVG+DG T  G+FDI ++ CLP + +MAPS E EL+ M AT 
Sbjct: 425 HDVVLQKLPVRFAIDRAGLVGADGATHAGSFDIAYLGCLPGITLMAPSTEVELMHMTATA 484

Query: 547 ASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVE-----GKD---VALLGYGAM 598
            + D+ P+  RYPRGA +   LP   G  +EIG+G+++ E     G +   +A+L  G  
Sbjct: 485 IAFDEGPIGLRYPRGAGLGLALPAA-GEVLEIGRGRIVREMARQSGPEQGGIAILSLGPR 543

Query: 599 VQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVS 658
           +++ LKA  +L+  G+  TVADARF KP+D  LV +L +NH  LIT+EEGS+GGF S V 
Sbjct: 544 LEHALKAADMLAAHGLSPTVADARFAKPIDTALVEQLARNHAVLITIEEGSVGGFASFVM 603

Query: 659 HFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
             +A  GLLD  V++RP+ LPD +I+H +   Q   AGL    I  TALS LG
Sbjct: 604 THLAKTGLLDR-VRFRPMTLPDRFIDHNTQDAQYIEAGLDAAAIVDTALSALG 655


>gi|254449568|ref|ZP_05063005.1| 1-deoxy-D-xylulose-5-phosphate synthase [Octadecabacter arcticus
           238]
 gi|198263974|gb|EDY88244.1| 1-deoxy-D-xylulose-5-phosphate synthase [Octadecabacter arcticus
           238]
          Length = 626

 Score =  560 bits (1443), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 300/638 (47%), Positives = 404/638 (63%), Gaps = 28/638 (4%)

Query: 82  LDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAP 141
           +D ++ P  L  L+  +L+ LA E+R+E  S VS+T   L + L  VELTVALH VF AP
Sbjct: 1   MDQIDLPSDLNGLSDLQLRTLADELRAETISAVSETGGHLGAGLGVVELTVALHAVFDAP 60

Query: 142 VDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAG 201
            DKI+WDV  QTY HKILTGRR  I TLR+KDG+SG+T RSES YD F A H   S+SA 
Sbjct: 61  KDKIVWDVSHQTYPHKILTGRRDGIRTLRQKDGLSGFTKRSESPYDCFGAAHSSTSISAA 120

Query: 202 LGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKIE 261
           LG AVARD+ G+    + VI +G   AG AYEA++NAG+L   +IVILND+  S+ P   
Sbjct: 121 LGFAVARDLGGEGGDAIAVIGDGAMSAGMAYEALNNAGHLKKRLIVILNDNEMSIAP--- 177

Query: 262 ESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQG 321
                 + A+SS LSR+ +   F++ +  AKG    +   + E A +  +  + M    G
Sbjct: 178 -----PVGAMSSYLSRLYAGDPFQEFKAAAKGAVSFLPGPLQEGARRAKDMLKHMT--VG 230

Query: 322 STLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTE------ENR--RAE 373
            TLFEELG  Y+GP+DGH++E L+SVL+ V +  + GP+L+H +T+      ENR  R  
Sbjct: 231 GTLFEELGFSYLGPIDGHDMEQLLSVLRTVKTRAT-GPILIHAITKKGKGYAENRADRGH 289

Query: 374 DTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
            T K + +  +Q+  + SN       + +Y   F E+L+ +A KD  IV V A M     
Sbjct: 290 ATAKFDVVTGEQK-KTPSN-------APSYTSVFAESLIKQATKDDKIVAVTAAMPDGTG 341

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L  F  +F  R FDVG+AEQHAVTF AGLA GG+KPFC I S FLQR YDQ+V+DV  QR
Sbjct: 342 LDRFMSRFASRCFDVGIAEQHAVTFCAGLAAGGMKPFCTIYSTFLQRGYDQIVHDVAIQR 401

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPVRF I  AGLVG+DG T  G+FD+ F++ LP  +VMA +DE EL  MVAT  + D  P
Sbjct: 402 LPVRFAIDRAGLVGADGATHAGSFDVAFLANLPGFVVMAAADEAELTRMVATAVAHDSGP 461

Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
           + FR+PRG  V  ++P     P+EIGKG+++ EG  VA+L +G  +Q   KA   L+  G
Sbjct: 462 IAFRFPRGEGVGVEIPD-DAQPLEIGKGRMIREGSRVAILSFGTRLQEVEKACEALAAKG 520

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKW 673
           I  TVADARF KPLD +++  L ++H  LITVEEG++GGFGSHV+  +A +G+ D G+K+
Sbjct: 521 ITPTVADARFVKPLDREMILGLARDHEALITVEEGAVGGFGSHVAQLLAEEGVFDHGLKF 580

Query: 674 RPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
           R +V PD +I+ A P +   +AG+   HI A  L +LG
Sbjct: 581 RSMVFPDIFIDQAGPREMYEVAGMNAEHIEAKVLDVLG 618


>gi|452821339|gb|EME28371.1| 1-deoxy-D-xylulose-5-phosphate synthase [Galdieria sulphuraria]
          Length = 804

 Score =  560 bits (1442), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 312/709 (44%), Positives = 422/709 (59%), Gaps = 84/709 (11%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD +  P  LK L+++EL +L+ E+R E+  IVSKT   L ++L  +ELT+A+H+ F
Sbjct: 100 TPLLDTINFPNELKKLSLQELLRLSHELRWEVIRIVSKTGGHLGAALGVIELTLAIHYAF 159

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+++WDV  Q+Y HKILTGRRS + TLRK  G+SG+T R+ESEYDPF AGH   S+
Sbjct: 160 NTPEDRLIWDVSHQSYPHKILTGRRSRMLTLRKYGGLSGFTKRAESEYDPFGAGHSSTSI 219

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LGMA ARD+ GKR   + VI +G    G AYEAM+N GYL+  +IVILND+     P
Sbjct: 220 SAALGMATARDLSGKRNHCIAVIGDGGITGGMAYEAMNNCGYLNHRVIVILNDNNQVSLP 279

Query: 259 KIEESPK--TSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGM 316
              ++    +   ALS   +R+ SS  F  +R +AK +++     +  +AAK DEYAR +
Sbjct: 280 TGTKTAGGVSPAGALSKYTNRLLSSSPFLNIRSLAKDLSRIFPHQVQGFAAKADEYARTL 339

Query: 317 IGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR------ 370
               G TLFEELG YY+GPVDGH++EDLI +L+ V  +    PVL+HV TE+ R      
Sbjct: 340 F-TGGGTLFEELGFYYVGPVDGHSLEDLIPILENVRDMHVNKPVLIHVKTEKGRGYPPAE 398

Query: 371 ---------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDI 421
                     + D +  + ++KQ      S+S P       Y   F   L+ EAE+D+ I
Sbjct: 399 KALDKYHGVTSFDVETGKPLKKQD---VKSSSAPL-----NYSTIFANTLIREAEEDRKI 450

Query: 422 VVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRA 481
           V + A M     L LF EKFP R FDVG+AEQHAVTF+AGLA  G KPFC I S FLQR 
Sbjct: 451 VAITAAMPGGTGLNLFGEKFPSRCFDVGIAEQHAVTFAAGLASEGYKPFCCIYSTFLQRG 510

Query: 482 YDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVD 541
           YDQV++DV  Q LPVRF+I  AG+VG DG T  G++D+T++ C+PN+++MA S+E EL++
Sbjct: 511 YDQVIHDVALQSLPVRFMIDRAGMVGDDGSTHQGSYDLTYLGCIPNIVIMAASNEIELMN 570

Query: 542 MVATVASIDDRPVCFRYPRGAIVRTDL----PGY---------RGIPIEIGKGKVLVEGK 588
           MV T  SID +P   RYPRG  V  +      GY         RG  ++IGKG+++  G+
Sbjct: 571 MVVTSLSIDGKPSAVRYPRGVGVGIETLVTKLGYQLEDQKLPERGSVLKIGKGRLVRRGR 630

Query: 589 ------------------------------------------DVALLGYGAMVQNCLKAR 606
                                                      VALL  G  + +C+ A 
Sbjct: 631 FREGKNSTQEGLIERRLARQSNSGATDLYSAEKDNSSLYRKTHVALLSLGTRLVSCVDAA 690

Query: 607 ALLSKLG--IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALD 664
             L  L   + VTVADARF KPLDI+L+  L + +  LITVEE SIGGFGSHV  +++ +
Sbjct: 691 VHLESLDEQLAVTVADARFMKPLDIELIDYLVKQNEILITVEENSIGGFGSHVVQYLSQN 750

Query: 665 GLLDSG-VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
           G LD+G +K+R +V+PD +IEH S  +Q   AGL  H IA T L L+G+
Sbjct: 751 GYLDTGNLKFRSMVIPDKFIEHGSQGEQYDEAGLQSHQIATTVLRLVGK 799


>gi|163745284|ref|ZP_02152644.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oceanibulbus indolifex
           HEL-45]
 gi|161382102|gb|EDQ06511.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oceanibulbus indolifex
           HEL-45]
          Length = 642

 Score =  560 bits (1442), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 299/651 (45%), Positives = 400/651 (61%), Gaps = 34/651 (5%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           D   TP+LD V  P  LK L+  +L Q+A E+R+E  S VS+T   L + L  VELTVAL
Sbjct: 3   DTTATPLLDQVTRPADLKHLSDAQLTQVARELRTETISAVSETGGHLGAGLGVVELTVAL 62

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H VF  P DKI+WDV  Q Y HKILT RR  I +LR KDG+SG+T RSES YDPF A H 
Sbjct: 63  HAVFDTPRDKIIWDVSHQCYPHKILTERRDRIRSLRMKDGLSGFTKRSESPYDPFGAAHS 122

Query: 195 CNSVSAGLGMAVARDIKG----KRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
             S+SA LG AV RD+ G         + VI +G   AG AYEA++NAG L   +IVILN
Sbjct: 123 STSISAALGFAVGRDLGGVIPEGLGDAIAVIGDGAMSAGMAYEALNNAGDLKKRLIVILN 182

Query: 251 DSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVD 310
           D+  S+ P         + A+SS LSR+ +   F+  +  AKG    +     E A +  
Sbjct: 183 DNEMSIAP--------PVGAMSSYLSRLYAEAPFQDFKAAAKGAVSLLPEPFREGAKRAK 234

Query: 311 EYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR 370
           +  +GM    G TLFE LG  Y+GP++GH+++ L+ VL+ V    + GP+L+H+ T++ +
Sbjct: 235 DMLKGMA--VGGTLFENLGFSYLGPINGHDMDQLLPVLRTVQQRAT-GPILIHIQTQKGK 291

Query: 371 ----------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKD 420
                     R   T K   +  +Q+  S SN+        +Y   F ++L+ EA +D  
Sbjct: 292 GYGPAEAARDRGHATAKFNVVTGEQK-KSPSNA-------PSYTRVFADSLLTEAAEDDK 343

Query: 421 IVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQR 480
           I  V A M     L LF E++P R FDVG+AEQH VTF AGLA  G+KPFC + S FLQR
Sbjct: 344 ICAVTAAMPDGTGLDLFAERYPSRCFDVGIAEQHGVTFCAGLAAAGMKPFCAMYSTFLQR 403

Query: 481 AYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELV 540
            YDQVV+DV  QRLPVRF I  AGLVG+DGPT  GAFD+ F++ LP  +VMA +DE EL 
Sbjct: 404 GYDQVVHDVAIQRLPVRFAIDRAGLVGADGPTHAGAFDVAFLANLPGFVVMAAADEAELR 463

Query: 541 DMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQ 600
            MVAT A+ D+ P+ FRYPRG     ++P  RG P+EIGKG+++ EG  VALL +G  ++
Sbjct: 464 HMVATAAAHDEGPIAFRYPRGEGRGVEMP-ERGTPLEIGKGRIIREGSKVALLSFGTRLE 522

Query: 601 NCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHF 660
              KA   LS  GI  T+ADARF KPLD  ++ +L ++H  LIT+EEG++GGFGSHV+  
Sbjct: 523 EVEKAAEALSAKGITPTIADARFAKPLDRDMILKLAEDHEALITIEEGAVGGFGSHVAQL 582

Query: 661 IALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
           +A + + D G+K+R +VLPD +I+ A+P    A+AG+    I A  L +LG
Sbjct: 583 LADEAVFDKGLKFRSMVLPDIFIDQANPADMYAVAGMNAEQITAKVLDVLG 633


>gi|310814825|ref|YP_003962789.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ketogulonicigenium vulgare
           Y25]
 gi|385234996|ref|YP_005796338.1| 1-deoxy-D-xylulose-5-phosphate synthase 2 [Ketogulonicigenium
           vulgare WSH-001]
 gi|308753560|gb|ADO41489.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ketogulonicigenium vulgare
           Y25]
 gi|343463907|gb|AEM42342.1| 1-deoxy-D-xylulose-5-phosphate synthase 2 [Ketogulonicigenium
           vulgare WSH-001]
          Length = 644

 Score =  560 bits (1442), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 306/643 (47%), Positives = 402/643 (62%), Gaps = 25/643 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V +P  LK L+  +L +LA E+R+E  S VS+T   L + L  VELTVALH VF
Sbjct: 9   TPLLDRVSSPADLKRLSDADLVRLAGELRAETISAVSETGGHLGAGLGVVELTVALHAVF 68

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
            AP DKI+WDV  Q+Y HKILTGRR  I TLR+KDG+SG+T RSES YDPF A H   S+
Sbjct: 69  DAPRDKIIWDVSHQSYPHKILTGRRDRIRTLRQKDGLSGFTKRSESPYDPFGAAHSSTSI 128

Query: 199 SAGLGMAVARDIKGKRE-----CIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSR 253
           SA LG AVARD+ G          + +I +G+  AG A+EAM+NAG L   M VILND+ 
Sbjct: 129 SAALGFAVARDLGGATPEGAIGDTIAIIGDGSMSAGMAFEAMNNAGDLKKRMFVILNDNE 188

Query: 254 HSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYA 313
            S+ P +         ALSS LSR+ +   F+ L+  AKG    +   + E A +  E  
Sbjct: 189 MSIAPPV--------GALSSYLSRLYAGGPFQDLKAAAKGAVNMLPEPLREGAKRAKEML 240

Query: 314 RGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAE 373
           + M    G T+FEELG  Y+GP+DGH++E L++VL+ V    + GPVL+H +T++ +   
Sbjct: 241 KHMT--VGGTMFEELGFSYLGPIDGHDMEQLLAVLRTVHDRAT-GPVLIHAITQKGK--- 294

Query: 374 DTQKSEAIEKQQEGASDSNSL-----PFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGM 428
               +EA   +  G    + +        + + +Y   F  AL+ +AEKD  IV + A M
Sbjct: 295 GYAPAEAARDKGHGVGKFDVVTGEQAKVKSNAPSYTSVFANALIEQAEKDSRIVAITAAM 354

Query: 429 EMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVND 488
                L  F  +F +R FDVG+AEQHAVTF+AGLA GG+KPFC + S FLQR YDQVV+D
Sbjct: 355 PDGTGLDKFMVRFADRCFDVGIAEQHAVTFAAGLAAGGMKPFCALYSTFLQRGYDQVVHD 414

Query: 489 VDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVAS 548
           V  QRLPVRF I  AGLVG+DG T  GAFDI FM+ LP M+VMA +DE ELV MVAT A 
Sbjct: 415 VAIQRLPVRFAIDRAGLVGADGATHAGAFDIAFMANLPGMVVMAAADEAELVRMVATAAQ 474

Query: 549 IDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARAL 608
            +D P+ FR+PRG  V  ++P     P+EIGKG++   G  VA+L +G  +     A  L
Sbjct: 475 HNDGPIAFRFPRGEGVGVEIPA-DAQPLEIGKGRITQAGARVAILSFGTRLSEAEAAAEL 533

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLD 668
           LS  GI  T+ADARF KPLD  ++  L + H  LIT+EEG+IGGFGSHV+  +A  G+ D
Sbjct: 534 LSARGITPTIADARFAKPLDRDMILRLAREHEVLITIEEGAIGGFGSHVAQLLAEAGVFD 593

Query: 669 SGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
            G+K+R +VLPD +I+ A+P     +AGL  + IA   LS LG
Sbjct: 594 HGLKFRSMVLPDIFIDQANPRDMYDVAGLNANDIANKVLSALG 636


>gi|37903541|gb|AAP56243.1| 1-deoxy-D-xylulose 5-phosphate synthase [Agrobacterium tumefaciens]
          Length = 639

 Score =  559 bits (1441), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 297/639 (46%), Positives = 401/639 (62%), Gaps = 20/639 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V  P  LK +  ++L +LA E+R E+   VS T   L + L  VELT+A+H VF
Sbjct: 7   TPLLDRVNFPSDLKEIDDRDLPELARELRDEMIDAVSSTGGHLGAGLGVVELTIAIHKVF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D++++DVG Q Y HKILTGRR  I TLR++ G+SG+T R+ESEYD F AGH   S+
Sbjct: 67  NTPEDRLIFDVGHQCYPHKILTGRRERIRTLRQEGGLSGFTRRAESEYDDFGAGHSSTSI 126

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVA  +      ++ VI +G+  AG A+EA++NAG LD+ +IVILND+  S+ P
Sbjct: 127 SAGLGMAVAAGLDESDRKVIAVIGDGSMSAGMAFEALNNAGALDARLIVILNDNDMSIAP 186

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S+ L+R+ S +++   R+  K +T  +G+ +     +   +ARG + 
Sbjct: 187 PT--------GAMSAYLARLASGRTYMGFRDFGKKLTAYLGKTIDRAITRAVTHARGYV- 237

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G TLFEELG Y+IGP+DGH+ + L+ VL+ V      GPVL+HVVT++ +       +
Sbjct: 238 -TGGTLFEELGFYHIGPIDGHSFDHLLPVLRNVRD-NQKGPVLIHVVTQKGK---GYAPA 292

Query: 379 EAIEKQQEGASDSNSLPFGNY-----SRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
           EA   +  G +  + +          + +Y   F EAL+ EA  D  IV V A M     
Sbjct: 293 EAAADKYHGVNKFDVITGAQAKAKPNAPSYTSVFAEALIQEATLDDKIVGVTAAMPNGTG 352

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L    E FP R FDVG+AEQHAVTF+AGLA  G KPFC + S FLQR YDQ+V+DV  Q 
Sbjct: 353 LDKMAELFPSRTFDVGIAEQHAVTFAAGLAADGYKPFCALYSTFLQRGYDQLVHDVAIQS 412

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPVRF I  AG VG+DGPT  G+FD TF++ LP M+VMA +DE EL  MV T A+ D+ P
Sbjct: 413 LPVRFPIDRAGFVGADGPTHAGSFDTTFLATLPGMVVMAAADEAELKHMVRTAAAYDEGP 472

Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
           + FRYPRG  V  ++P  RG  +EIGKG+++ EG  VALL +G  +  CL A   L   G
Sbjct: 473 ISFRYPRGEGVGVEMPA-RGEILEIGKGRIIKEGTKVALLSFGTRLAECLAAAEDLDAAG 531

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKW 673
           +  TVADARF KPLD+ L+R+L  +H  L+T+EEGS+GGFG+HV HF+A  GLLD G K 
Sbjct: 532 LSTTVADARFAKPLDLDLIRQLAAHHEVLVTIEEGSVGGFGAHVLHFMASAGLLDHGPKV 591

Query: 674 RPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
           R + LPD ++E A P    A AGL    I +T  + LG+
Sbjct: 592 RTLTLPDQWVEQAKPETMYANAGLDRAGIVSTVFNALGQ 630


>gi|224104228|ref|XP_002333970.1| predicted protein [Populus trichocarpa]
 gi|222839426|gb|EEE77763.1| predicted protein [Populus trichocarpa]
          Length = 396

 Score =  559 bits (1441), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 294/386 (76%), Positives = 329/386 (85%), Gaps = 6/386 (1%)

Query: 1   MVTPSAKYPLELPLTAHCHGTLDQRKIEFLSSNISRELEISRINLCPSSSSITSSKLVTV 60
           M T  A+YP    +T+H        K+E LSSN   ++EISR NL PSS S T+SK V V
Sbjct: 1   MGTAIAQYPY--GITSHSFVKFGH-KLEILSSNSHFKVEISRYNLYPSSVSTTNSK-VCV 56

Query: 61  SRICALPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKS 120
            RI ALPDIDD F D   TP+LD+VENP+ LK+LTIKELK LA EIRSELSSI+SK +K 
Sbjct: 57  GRIRALPDIDDIFSDIIATPLLDVVENPIHLKNLTIKELKLLASEIRSELSSIMSKAQKD 116

Query: 121 LKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTS 180
            K+SLAAVELTVA+HHVFHAPVDKILWDVGEQTYAHKILTGRRSL+ TLR+KDG+SG+TS
Sbjct: 117 FKASLAAVELTVAIHHVFHAPVDKILWDVGEQTYAHKILTGRRSLMRTLRQKDGLSGFTS 176

Query: 181 RSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGY 240
           RSESEYDPF AGHGCNS+SAGLGMAVARDIKGKRE IVTVI NGTTMAGQ YEAM NAGY
Sbjct: 177 RSESEYDPFGAGHGCNSISAGLGMAVARDIKGKRERIVTVIGNGTTMAGQVYEAMGNAGY 236

Query: 241 LDSNMIVILNDSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGR 300
           LDSNMIVILNDSRHSLHPKIEE  KTSINALSSTLS++QSSKSFR+LREVAKG+TKRI  
Sbjct: 237 LDSNMIVILNDSRHSLHPKIEEGSKTSINALSSTLSKLQSSKSFRRLREVAKGVTKRI-- 294

Query: 301 GMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPV 360
           GM+E AAKVDEYARGM+GP GSTLFEELGLYYIGPVDGHNIEDL+ VLQEV++L SMGPV
Sbjct: 295 GMYELAAKVDEYARGMMGPLGSTLFEELGLYYIGPVDGHNIEDLVCVLQEVSTLESMGPV 354

Query: 361 LVHVVTEENRRAEDTQKSEAIEKQQE 386
           L+HV+TEEN+ AE  Q++EA+  QQE
Sbjct: 355 LIHVITEENQCAEHKQQTEAMGNQQE 380


>gi|112950411|gb|ABI26724.1| 1-deoxy-D-xylulose 5-phosphate synthase [Agrobacterium tumefaciens]
          Length = 639

 Score =  559 bits (1441), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 296/639 (46%), Positives = 402/639 (62%), Gaps = 20/639 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V  P  LK +  ++L +LA E+R E+   VS+T   L + L  VELT+A+H VF
Sbjct: 7   TPLLDRVNFPSDLKEIDDRDLPELARELRDEMIDAVSRTGGHLGAGLGVVELTIAIHKVF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D++++DVG Q Y HKILTGRR  I TLR++ G+SG+T R+ESEYD F AGH   S+
Sbjct: 67  NTPEDRLIFDVGHQCYPHKILTGRRERIRTLRQEGGLSGFTRRAESEYDDFGAGHSSTSI 126

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVA  +      ++ VI +G+  AG A+EA++NAG LD+ +IVILND+  S+ P
Sbjct: 127 SAGLGMAVAAGLDESDRKVIAVIGDGSMSAGMAFEALNNAGALDARLIVILNDNDMSIAP 186

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S+ L+R+ S +++   R+  K +T  +G+ +     +   +ARG + 
Sbjct: 187 PT--------GAMSAYLARLASGRTYMGFRDFGKKLTAYLGKTIDRAITRAVTHARGYV- 237

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G TLFEELG Y+IGP+DGH+ + L+ VL+ V      GPVL+HVVT++ +       +
Sbjct: 238 -TGGTLFEELGFYHIGPIDGHSFDHLLPVLRNVRD-NQKGPVLIHVVTQKGK---GYAPA 292

Query: 379 EAIEKQQEGASDSNSLPFGNY-----SRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
           EA   +  G +  + +          + +Y   F EAL+ EA  D  I+ V A M     
Sbjct: 293 EAAADKYHGVNKFDVITGAQAKAKPNAPSYTSVFAEALIQEATLDDKIIGVTAAMPNGTG 352

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L    E FP R FDVG+AEQHAVTF+AGLA  G KPFC + S FLQR YDQ+V+DV  Q 
Sbjct: 353 LDKMAELFPSRTFDVGIAEQHAVTFAAGLAADGYKPFCALYSTFLQRGYDQLVHDVAIQS 412

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPVRF I  AG VG+DGPT  G+FD TF++ LP M+VMA +DE EL  MV T A+ D+ P
Sbjct: 413 LPVRFPIDRAGFVGADGPTHAGSFDTTFLATLPGMVVMAAADEAELKHMVRTAAAYDEGP 472

Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
           + FRYPRG  V  ++P  RG  +EIGKG+++ EG  VALL +G  +  CL A   L   G
Sbjct: 473 ISFRYPRGEGVGVEMPA-RGEILEIGKGRIIKEGTKVALLSFGTRLAECLAAAEDLDAAG 531

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKW 673
           +  TVADARF KPLD+ L+R+L  +H  L+T+EEGS+GGFG+HV HF+A  GLLD G K 
Sbjct: 532 LSTTVADARFAKPLDLDLIRQLAAHHEVLVTIEEGSVGGFGAHVLHFMASAGLLDHGPKV 591

Query: 674 RPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
           R + LPD ++E A P    A AGL    I +T  + LG+
Sbjct: 592 RTLTLPDQWVEQAKPGTMYANAGLDRAGIVSTVFNALGQ 630


>gi|126736182|ref|ZP_01751925.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseobacter sp. CCS2]
 gi|126714348|gb|EBA11216.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseobacter sp. CCS2]
          Length = 637

 Score =  559 bits (1440), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 300/647 (46%), Positives = 402/647 (62%), Gaps = 30/647 (4%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           D+  TP+LD V  P  +K ++  EL+QLA E+R+E  + VS T   L + L  VE+TVAL
Sbjct: 3   DQPHTPLLDRVNTPDDMKGMSDAELRQLADELRAETIAAVSVTGGHLGAGLGVVEMTVAL 62

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H VF AP DKI+WDV  Q Y HKILTGRR  I TLR + G+SG+T RSES YDPF A H 
Sbjct: 63  HAVFDAPKDKIIWDVSHQCYPHKILTGRRDRIRTLRTEGGLSGFTKRSESPYDPFGAAHS 122

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA LG AVARD+       + +I +G   AG AYEAM+NAG+L   +IVILND+  
Sbjct: 123 STSISAALGFAVARDLGAGGGDAIAIIGDGAMSAGMAYEAMNNAGHLGKRLIVILNDNEM 182

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+ P           A+SS LSR+ + + F++ +  AKG    +     E A +  +  +
Sbjct: 183 SIAP--------PTGAMSSYLSRLYAGEPFQEFKAAAKGAVSLLPEPFREGAKRAKDMLK 234

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---- 370
            M    G TLFEELG  Y+GP+DGH++E L+SVL+ V      GP+L+H +T++ +    
Sbjct: 235 HMT--VGGTLFEELGFSYLGPIDGHDMEQLLSVLRTVKDRAD-GPILIHAITKKGKGYAP 291

Query: 371 --RAED----TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVV 424
             RA D    T K + I  +Q+ A  +        + +Y   F E+L   A  D  I  V
Sbjct: 292 AERASDKGHATAKFDVITGEQKKAPSN--------APSYTSVFSESLCKLAADDPKICAV 343

Query: 425 HAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQ 484
            A M     L  F E++  R FDVG+AEQHAVTFSAGLA GG++PFC + S FLQR YDQ
Sbjct: 344 TAAMPDGTGLTKFMERYTSRCFDVGIAEQHAVTFSAGLAAGGMRPFCALYSTFLQRGYDQ 403

Query: 485 VVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVA 544
           VV+DV  QRLPVRF I  AGLVG+DG T  G+FD+ ++S LP  +VMA +DE ELV MV 
Sbjct: 404 VVHDVAIQRLPVRFAIDRAGLVGADGATHAGSFDVGYLSNLPGFVVMAAADEAELVRMVT 463

Query: 545 TVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLK 604
           T A+ D+ P+ FR+PRG  V  ++P    + +EIGKG+++ EG  VA+L +G  +Q  + 
Sbjct: 464 TAAAHDEGPIAFRFPRGEGVGVEMPETPEL-LEIGKGRMIREGAQVAILSFGTRLQEVMS 522

Query: 605 ARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALD 664
           A   L   GI  TVADARF KPLD +L+ +L  +H  LITVEEG++GGFGSHV+  +A +
Sbjct: 523 ACEALEAKGIKPTVADARFAKPLDRELILQLAADHDALITVEEGAVGGFGSHVAQLLADE 582

Query: 665 GLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
           G+ D G+K+R +VLPD +I+ ASP     +AG+   HI A  L +LG
Sbjct: 583 GVFDHGLKYRSMVLPDTFIDQASPKVMYDVAGMNAEHIEAKVLEVLG 629


>gi|418406285|ref|ZP_12979604.1| 1-deoxy-D-xylulose-5-phosphate synthase [Agrobacterium tumefaciens
           5A]
 gi|358006778|gb|EHJ99101.1| 1-deoxy-D-xylulose-5-phosphate synthase [Agrobacterium tumefaciens
           5A]
          Length = 639

 Score =  559 bits (1440), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 296/639 (46%), Positives = 402/639 (62%), Gaps = 20/639 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V  P  LK +  ++L +LA E+R E+   VS T   L + L  VELT+A+H VF
Sbjct: 7   TPLLDRVNFPSDLKEIDDRDLPELARELRDEMIDAVSSTGGHLGAGLGVVELTIAIHKVF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D++++DVG Q Y HKILTGRR  I TLR++ G+SG+T R+ESEYD F AGH   S+
Sbjct: 67  NTPEDRLIFDVGHQCYPHKILTGRRERIRTLRQEGGLSGFTRRAESEYDDFGAGHSSTSI 126

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVA  +      ++ VI +G+  AG A+EA++NAG LD+ +IVILND+  S+ P
Sbjct: 127 SAGLGMAVAAGLDQSDRKVIAVIGDGSMSAGMAFEALNNAGALDARLIVILNDNDMSIAP 186

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S+ L+R+ S +++   R+  K +T  +G+ +     +   +ARG + 
Sbjct: 187 PT--------GAMSAYLARLASGRTYMGFRDFGKKLTAYLGKTIDRAITRAVTHARGYV- 237

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G TLFEELG Y+IGP+DGH+ + L+ VL+ V      GPVL+HVVT++ +       +
Sbjct: 238 -TGGTLFEELGFYHIGPIDGHSFDHLLPVLRNVRD-NQKGPVLIHVVTQKGK---GYAPA 292

Query: 379 EAIEKQQEGASDSNSLPFGNY-----SRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
           EA   +  G +  + +          + +Y   F EAL+ EA  D  I+ V A M     
Sbjct: 293 EAAADKYHGVNKFDVITGAQAKAKPNAPSYTSVFAEALIQEATLDDKIIGVTAAMPNGTG 352

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L    E FP R FDVG+AEQHAVTF+AGLA  G KPFC + S FLQR YDQ+V+DV  Q 
Sbjct: 353 LDKMAELFPARTFDVGIAEQHAVTFAAGLAADGYKPFCALYSTFLQRGYDQLVHDVAIQS 412

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPVRF I  AG VG+DGPT  G+FD TF++ LP M+VMA SDE EL  MV T A+ D+ P
Sbjct: 413 LPVRFPIDRAGFVGADGPTHAGSFDTTFLATLPGMVVMAASDEAELKHMVRTAAAYDEGP 472

Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
           + FRYPRG  V  ++P  RG  ++IGKG+++ EG  VALL +G  +  CL A   L   G
Sbjct: 473 ISFRYPRGEGVGVEMPA-RGEILQIGKGRIIKEGTKVALLSFGTRLAECLAAAEDLDAAG 531

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKW 673
           +  TVADARF KPLD+ L+R+L  +H  L+T+EEGS+GGFG+HV HF+A  GLLD G K 
Sbjct: 532 LSTTVADARFAKPLDLDLIRQLAAHHEVLVTIEEGSVGGFGAHVLHFMASAGLLDHGPKV 591

Query: 674 RPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
           R + LPD+++E A P    A AGL    I +T  + LG+
Sbjct: 592 RTLTLPDHWVEQAKPETMYANAGLDRAGIVSTVFNALGQ 630


>gi|259418101|ref|ZP_05742020.1| 1-deoxy-D-xylulose-5-phosphate synthase [Silicibacter sp.
           TrichCH4B]
 gi|259347007|gb|EEW58821.1| 1-deoxy-D-xylulose-5-phosphate synthase [Silicibacter sp.
           TrichCH4B]
          Length = 642

 Score =  559 bits (1440), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 304/648 (46%), Positives = 397/648 (61%), Gaps = 22/648 (3%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           D+  TP+LD + +P  LK L+  +L+QLA E+R E  S VS T   L + L  VELTVAL
Sbjct: 3   DRPQTPLLDQIASPADLKRLSDAQLEQLAHELRQETISAVSVTGGHLGAGLGVVELTVAL 62

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H VF  P DK++WDV  Q Y HKILTGRR  I TLR KDG+SG+T RSES +DPF A H 
Sbjct: 63  HAVFDTPKDKVIWDVSHQCYPHKILTGRRDRIRTLRMKDGLSGFTKRSESAFDPFGAAHS 122

Query: 195 CNSVSAGLGMAVARDIKGKRE----CIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
             S+SA LG +VARD+ G  E      + VI +G   AG A+EAM+NAG+L   +IVILN
Sbjct: 123 STSISAALGFSVARDLGGVTEEGLGDAIAVIGDGAMSAGMAFEAMNNAGHLGKRLIVILN 182

Query: 251 DSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVD 310
           D+  S+ P         + ALSS LSR+ +   F  L+  AKG    +     E A +  
Sbjct: 183 DNEMSIAP--------PVGALSSYLSRLYTEAPFHDLKAAAKGAVSLLPEPFREGAKRAK 234

Query: 311 EYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN- 369
           +  +GM    G TLFE LG  YIGP+DGH+++ L+ VL+ V +  + GP+L+H VT++  
Sbjct: 235 DMLKGMA--MGGTLFESLGFSYIGPIDGHDMDQLLPVLRTVKARAN-GPILIHAVTKKGK 291

Query: 370 --RRAEDTQ-KSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHA 426
             R AE  + K  A  K      +    P  + + +Y   F + L   A +D  I  V A
Sbjct: 292 GYRPAEVARDKGHATAKFDMVTGEQKKAP--SNAPSYTSIFGKTLAELAAQDSKICAVTA 349

Query: 427 GMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVV 486
            M     L L  E++P R FDVG+AEQH VTF+A LA GG+KPFC + S FLQR YDQVV
Sbjct: 350 AMPDGTGLNLMAERYPSRTFDVGIAEQHGVTFAAALAAGGMKPFCAMYSTFLQRGYDQVV 409

Query: 487 NDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATV 546
           +DV  QRLPVRF I  AGLVG+DG T  G+FDI FM+ LP M+VMA +DE EL  MVAT 
Sbjct: 410 HDVAIQRLPVRFAIDRAGLVGADGATHAGSFDIGFMANLPGMVVMAAADEAELKHMVATA 469

Query: 547 ASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
           A+ DD P+ FRYPRG     ++P    I +EIGKG+++ +GK VALL +G  +    KA 
Sbjct: 470 AAYDDGPIAFRYPRGEGEGVEMPEQPEI-LEIGKGRMIQDGKRVALLSFGTRLGEVRKAA 528

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGL 666
             L+  GI  T+ADARF KPLD  ++  L   H  LITVEEG++GGFGSHV+  ++ +G+
Sbjct: 529 EALAARGITPTIADARFAKPLDRDMILNLAAEHEALITVEEGAVGGFGSHVAQLLSDEGV 588

Query: 667 LDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTR 714
            D G+K+R +VLPD +I+ ASP      A +   HI A  L +LG  R
Sbjct: 589 FDEGLKFRSMVLPDTFIDQASPKDMYDDAAMNAEHIEAKVLDVLGVAR 636


>gi|359408195|ref|ZP_09200667.1| 1-deoxy-D-xylulose-5-phosphate synthase [SAR116 cluster alpha
           proteobacterium HIMB100]
 gi|356676952|gb|EHI49301.1| 1-deoxy-D-xylulose-5-phosphate synthase [SAR116 cluster alpha
           proteobacterium HIMB100]
          Length = 640

 Score =  559 bits (1440), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 290/628 (46%), Positives = 399/628 (63%), Gaps = 27/628 (4%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD +  P +L+SL+  +L  LA E+R ++   VS+T   L + L  VELT+ALH+VF
Sbjct: 6   TPLLDHIHTPDQLRSLSASQLPLLAEELRYDVIRAVSQTGGHLGAGLGVVELTIALHYVF 65

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR  +  LR++ G+SG+T RSES+YDPF AGH   S+
Sbjct: 66  DTPADRLIWDVGHQAYPHKILTGRREQMSGLRQEGGLSGFTKRSESDYDPFGAGHSSTSI 125

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVARD++G    ++ VI +G   AG A+EA++NAG +DSN++VILND+  S+ P
Sbjct: 126 SAGLGMAVARDLQGGHNNVIAVIGDGAMSAGMAFEALNNAGAMDSNLLVILNDNDMSIAP 185

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                    + A+S+ LS + SS+ ++ +R++ K +  R    + + A +  + AR ++ 
Sbjct: 186 P--------VGAMSAYLSEMISSRPYQSIRDLVKEVASRFPAEIEKTARRAKDLARDLV- 236

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR----RAED 374
             G +LF ELG ++IGP+DGH+ + L+ VL+ +      GPVLVHVVTE+ +        
Sbjct: 237 -SGHSLFSELGFFHIGPIDGHDFDHLLPVLRNLKDGQIGGPVLVHVVTEKGKGHPFAGPS 295

Query: 375 TQKSEAIEK-----QQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGME 429
           ++K  A+ K      Q+  S +N       S TY   F + L   AE+D+ IV + A M 
Sbjct: 296 SEKYHAVPKFDVVTGQQSKSSAN-------SPTYTQVFADTLSALAEEDEKIVAITAAMP 348

Query: 430 MDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDV 489
               L       P R FDVG+AEQHAVTF+AGLA  G+KPF  I S FLQR YDQ+V+DV
Sbjct: 349 SGTGLNQMMTTCPSRVFDVGIAEQHAVTFAAGLATEGMKPFAAIYSTFLQRGYDQLVHDV 408

Query: 490 DQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASI 549
             Q LPVRF I  AG+VG+DG T  G FD+ +++CLPNM++M PSDE EL  M AT AS 
Sbjct: 409 AIQNLPVRFAIDRAGVVGADGATHAGVFDLAYLACLPNMVIMCPSDEAELAHMTATAASY 468

Query: 550 DDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALL 609
           DD P   RYPRG     +LP     P+EIGKG++L +G+++A+L  G M Q C +    L
Sbjct: 469 DDGPSAVRYPRGTGTGAELP-QTPEPLEIGKGRLLQQGEELAILSLGTMAQTCSEVARRL 527

Query: 610 SKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDS 669
            + GI VT+ADARF KP D  L+R+L   H  L+ VEE S GGF +H+  F+A +GLLD+
Sbjct: 528 EQDGISVTLADARFAKPFDADLLRQLATTHDALMVVEESSPGGFSAHLLQFMATEGLLDT 587

Query: 670 GVKWRPIVLPDNYIEHASPTQQLALAGL 697
           G+K R   LPD YI+HA   +QLA AGL
Sbjct: 588 GLKIRVASLPDAYIDHADRARQLAGAGL 615


>gi|349700302|ref|ZP_08901931.1| 1-deoxy-D-xylulose-5-phosphate synthase, partial [Gluconacetobacter
           europaeus LMG 18494]
          Length = 630

 Score =  559 bits (1440), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 304/636 (47%), Positives = 402/636 (63%), Gaps = 35/636 (5%)

Query: 97  KELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYAH 156
           ++LKQLA E+RSE    VS T   L +SL  VELTVALH VF  P D+++WDVG Q Y H
Sbjct: 1   EQLKQLAEELRSETIDAVSTTGGHLGASLGVVELTVALHAVFDTPDDRVIWDVGHQAYPH 60

Query: 157 KILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDIKG---- 212
           KILTGRR  I TLR+  G+SG+T RSESEYDPF A H   S+SAGLGMAVA  ++     
Sbjct: 61  KILTGRRERIRTLRQPGGLSGFTRRSESEYDPFGAAHSSTSISAGLGMAVAHHLRAEEDP 120

Query: 213 --KRECIVTVISNGTTMAGQAYEAMSNAGYLD---SNMIVILNDSRHSLHPKIEESPKTS 267
             +   ++ VI +G+  AG AYEAM+NA +       +IV+LND+  S+ P +       
Sbjct: 121 SYRERNVIAVIGDGSISAGMAYEAMNNASHCGPGAERLIVVLNDNEMSIAPPV------- 173

Query: 268 INALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEE 327
             A+S+ LSR+ SS+ F  LRE+A  M KR+   +   A K DEYARG++   G TLFEE
Sbjct: 174 -GAMSNYLSRLMSSRKFLSLRELAAKMAKRLPGRLERTAKKADEYARGIM--TGGTLFEE 230

Query: 328 LGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQ----KSEAIEK 383
           LG YYIGPVDGH++  L+ +L+ +     +GPVLVHV+TE+       +    K  A+ K
Sbjct: 231 LGFYYIGPVDGHDMNQLVHILRNLRDAEDVGPVLVHVITEKGHGYTPAESAGDKYHAVSK 290

Query: 384 QQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPE 443
                 +    P G  S  Y   F + LV +A  D  IV + A M     L  F + +P+
Sbjct: 291 FNVVTGEQKKGPSGPPS--YTSVFAKELVRQAATDDRIVTITAAMPSGTGLDKFAKAYPD 348

Query: 444 RYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSA 503
           R+FDVG+AEQHAVTF+AG+A  GL+PFC I S FLQRAYDQV++DV  Q+LPVRF I  A
Sbjct: 349 RFFDVGIAEQHAVTFAAGMATEGLRPFCAIYSTFLQRAYDQVMHDVVLQKLPVRFAIDRA 408

Query: 504 GLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYPRGAI 563
           GLVG+DG T  GAFDI ++ CLP M +MAPS+E EL+ M AT  + D+ P+  RYPRGA 
Sbjct: 409 GLVGADGATHAGAFDIAYLGCLPGMTLMAPSNELELLHMTATSIAFDEGPIGLRYPRGAG 468

Query: 564 VRTDLPGYRGIPIEIGKGKVLVE-----GKD---VALLGYGAMVQNCLKARALLSKLGID 615
           +  +LP    I +EIG+G+++ E     G +   +A+L  G  +++ LKA  +L+  G+ 
Sbjct: 469 LGLELPAAGQI-LEIGRGRIVREMTRQSGPEQGGIAILSLGPRLEDALKAADMLAAQGLS 527

Query: 616 VTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWRP 675
            TVADARF KP+D  LV +L +NH  LIT+EEGS+GGF S+V   +A  GLLD  V++RP
Sbjct: 528 PTVADARFAKPIDTALVEQLARNHAVLITIEEGSVGGFASYVMTHLAKTGLLDR-VRFRP 586

Query: 676 IVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
           + LPD +I+H +   Q   AGL    I ATALS LG
Sbjct: 587 MTLPDRFIDHNTQAAQYHEAGLDAPAIVATALSALG 622


>gi|340779464|ref|ZP_08699407.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter aceti NBRC
           14818]
          Length = 645

 Score =  559 bits (1440), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 303/653 (46%), Positives = 412/653 (63%), Gaps = 36/653 (5%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+LD V +P+ L++L+I +LKQ+A E+RSE    VS T   L +SL  VELTVA+H VF 
Sbjct: 8   PLLDRVSHPVDLRNLSIDQLKQVADELRSETVETVSTTGGHLGASLGVVELTVAIHAVFD 67

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG Q Y HKI+TGRR  I TLR+  G+SG+T RSESEYDPF A H   S+S
Sbjct: 68  TPDDRLIWDVGHQAYPHKIITGRRDRIRTLRQPGGLSGFTRRSESEYDPFGAAHSSTSIS 127

Query: 200 AGLGMAVARDIKG------KRECIVTVISNGTTMAGQAYEAMSNA---GYLDSNMIVILN 250
           AGLGMAVA  ++       +   ++ VI +G+  AG AYEAM+NA   G     +IVILN
Sbjct: 128 AGLGMAVAHHLRAEEDPSYRERNVIAVIGDGSISAGMAYEAMNNAAVAGEGAERLIVILN 187

Query: 251 DSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVD 310
           D+  S+ P         + ++S+ LSR+ SS+ F  LR++A    K++   +   A K +
Sbjct: 188 DNEMSIAP--------PVGSMSNYLSRLMSSRQFMGLRDLAGKFVKKLPNRLERTAKKAE 239

Query: 311 EYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR 370
           EYARGMI   G TLFEELG YY+GPVDGH++  L+ +L+ +      GP+L+HV+TE+  
Sbjct: 240 EYARGMI--TGGTLFEELGFYYVGPVDGHDMTQLVPILRNLRDT-DQGPILLHVITEKGH 296

Query: 371 RAEDTQ----KSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHA 426
             +  +    K  A+ K      +    P G  S T  + F   L+  A  D  I  + A
Sbjct: 297 GYKPAEAAGDKYHAVAKFNVVTGEQKKAPPGPPSWT--NIFARELIDRASTDNRIAAITA 354

Query: 427 GMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVV 486
            M     L  F  KFP+R+FDVG+AEQHAVTF+AG+A  GL+PFC I S FLQRAYDQV+
Sbjct: 355 AMPSGTGLDKFATKFPDRFFDVGIAEQHAVTFAAGMATEGLRPFCAIYSTFLQRAYDQVM 414

Query: 487 NDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATV 546
           +DV  Q+LPVRF I  AGLVG+DG T  G+FDI ++ CLP M +MAPSDE EL++M AT 
Sbjct: 415 HDVVLQKLPVRFAIDRAGLVGADGATHAGSFDIAYLGCLPGMTIMAPSDEIELLNMTATA 474

Query: 547 ASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVE-----GKD---VALLGYGAM 598
              D+ P+  RYPRG     +LP  +G  I+IGKG+++ E     G++   +A+L  G  
Sbjct: 475 CEFDEGPIALRYPRGNTYGLELPA-KGEIIQIGKGRIVREMGQQSGREKGGIAILSLGPR 533

Query: 599 VQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVS 658
           +Q  LKA   L+  G+  TVADARF KPLD +LV +L ++H  LIT+EEGS+GGFGS V+
Sbjct: 534 LQEVLKAADQLAAHGLPPTVADARFAKPLDTQLVEQLARDHAVLITIEEGSVGGFGSFVA 593

Query: 659 HFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
             ++  GLLD+ V+ R + LPD +I+H S  +Q  +A L   +I  TAL+ LG
Sbjct: 594 QHLSKTGLLDN-VRLRTMTLPDMFIDHDSQFEQYNVAHLNAPYIVKTALNALG 645


>gi|347760612|ref|YP_004868173.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconacetobacter xylinus
           NBRC 3288]
 gi|347579582|dbj|BAK83803.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconacetobacter xylinus
           NBRC 3288]
          Length = 671

 Score =  559 bits (1440), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 303/653 (46%), Positives = 409/653 (62%), Gaps = 35/653 (5%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P LD V  P  +++L++++LKQLA E+R+E    VS T   L +SL  VELTVALH VF 
Sbjct: 15  PQLDRVRAPHDMRNLSVEQLKQLADELRAETIDAVSTTGGHLGASLGVVELTVALHAVFD 74

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG Q Y HKILTGRR  I TLR+  G+SG+T RSESEYDPF A H   S+S
Sbjct: 75  TPDDRVIWDVGHQAYPHKILTGRRERIRTLRQPGGLSGFTRRSESEYDPFGAAHSSTSIS 134

Query: 200 AGLGMAVARDIKG------KRECIVTVISNGTTMAGQAYEAMSNAGYLD---SNMIVILN 250
           AGLGMAVA  ++       +   ++ VI +G+  AG AYEAM+NA +       +IV+LN
Sbjct: 135 AGLGMAVAHHLRAEEDPAYRERNVIAVIGDGSISAGMAYEAMNNASHCGPGAERLIVVLN 194

Query: 251 DSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVD 310
           D+  S+ P +         A+S+ LSR+ SS+ F  LRE+A  M KR+   +   A K D
Sbjct: 195 DNEMSIAPPV--------GAMSNYLSRLMSSRKFLSLRELAAKMAKRLPGRLERTAKKAD 246

Query: 311 EYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR 370
           EYARG++   G TLFEELG YY+GPVDGH++  L+ +L+ +     +GPVL+HV+TE+  
Sbjct: 247 EYARGIM--TGGTLFEELGFYYVGPVDGHDMNQLVHILRNLRDAEDVGPVLLHVITEKGH 304

Query: 371 RAEDTQ----KSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHA 426
                +    K  A+ K      +    P G  S  Y   F + LV +A  D  IV + A
Sbjct: 305 GYTPAESAGDKYHAVSKFNVVTGEQKKGPSGPPS--YTSVFAKELVRQAATDDRIVTITA 362

Query: 427 GMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVV 486
            M     L  F + +P+R+FDVG+AEQHAVTF+AG+A  GL+PFC I S+FLQRAYDQV+
Sbjct: 363 AMPSGTGLDKFAKAYPDRFFDVGIAEQHAVTFAAGMATEGLRPFCAIYSSFLQRAYDQVM 422

Query: 487 NDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATV 546
           +DV  Q+LPVRF I  AGLVG+DG T  G+FDI ++ CLP + +MAPS E EL+ M AT 
Sbjct: 423 HDVVLQKLPVRFAIDRAGLVGADGATHAGSFDIAYLGCLPGITLMAPSTEVELMHMTATA 482

Query: 547 ASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVE-----GKD---VALLGYGAM 598
            + D+ P+  RYPRGA +   LP   G  +EIG+G+++ E     G +   +A+L  G  
Sbjct: 483 IAFDEGPIGLRYPRGAGLGLALPAA-GEVLEIGRGRIVREMARQSGPEQGGIAILSLGPR 541

Query: 599 VQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVS 658
           +++ LKA  +L+  G+  TVADARF KP+D  LV +L +NH  LIT+EEGS+GGF S V 
Sbjct: 542 LEHALKAADMLAAHGLSPTVADARFAKPIDTALVEQLARNHAVLITIEEGSVGGFASFVM 601

Query: 659 HFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
             +A  GLLD  V++RP+ LPD +I+H +   Q   AGL    I  TAL  LG
Sbjct: 602 THLAKTGLLDR-VRFRPMTLPDRFIDHNTQDAQYIEAGLDAAAITNTALEALG 653


>gi|55733939|gb|AAV59446.1| putative 1-deoxy-D-xylulose 5-phosphate synthase [Oryza sativa
           Japonica Group]
          Length = 885

 Score =  558 bits (1439), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 282/486 (58%), Positives = 343/486 (70%), Gaps = 24/486 (4%)

Query: 252 SRHSLHPKIEESPKTSINALSS----------TLSRIQSSKSFRQLREVAKGMTKRIGRG 301
           SR SL P    S   +++ L +          TL  +   +   +LR    G+TK+IG  
Sbjct: 402 SRRSLSPAAASSTVHAMSELIAGGGVLCHPHFTLELVADGRVLHRLRH---GVTKQIGGS 458

Query: 302 MHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVL 361
           +HE AAKVDEYARGMI   GSTLFEELGLYYIGPVDGHNI+DLI++L+EV S  + GPVL
Sbjct: 459 VHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDLITILREVKSTKTTGPVL 518

Query: 362 VHVVTEENR------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEA 415
           +HVVTE+ R      RA D  K   + K           P    S  Y + F EAL+ EA
Sbjct: 519 IHVVTEKGRGYPYAERAAD--KYHGVAKFDPATGKQFKSPAKTLS--YTNYFAEALIAEA 574

Query: 416 EKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPS 475
           E+D  +V +HA M     L  F  +FP R FDVG+AEQHAVTF+AGLAC GLKPFC I S
Sbjct: 575 EQDNRVVAIHAAMGGGTGLNYFLRRFPNRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYS 634

Query: 476 AFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSD 535
           +FLQR YDQVV+DVD Q+LPVRF +  AGLVG+DGPT CGAFD+T+M+CLPNM+VMAPSD
Sbjct: 635 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTYMACLPNMVVMAPSD 694

Query: 536 EDELVDMVATVASIDDRPVCFRYPRGAIVRTDL-PGYRGIPIEIGKGKVLVEGKDVALLG 594
           E EL  MVAT A+IDDRP CFRYPRG  +   L P Y+G+P+E+GKG+VL+EG+ VALLG
Sbjct: 695 EAELCHMVATAAAIDDRPSCFRYPRGNGIGVPLPPNYKGVPLEVGKGRVLLEGERVALLG 754

Query: 595 YGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFG 654
           YG+ VQ CL A +L+ + G+ VTVADARFCKPLD  L+R L  +H  L+TVEEGSIGGFG
Sbjct: 755 YGSAVQYCLAAASLVERHGLKVTVADARFCKPLDQTLIRRLASSHEVLLTVEEGSIGGFG 814

Query: 655 SHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTR 714
           SHV+ F+ALDGLLD  +KWRP+VLPD YI+H SP  QLA AGLT  HIAAT  ++LG+ R
Sbjct: 815 SHVAQFMALDGLLDGKLKWRPLVLPDRYIDHGSPADQLAEAGLTPSHIAATVFNVLGQAR 874

Query: 715 EALLLM 720
           EAL +M
Sbjct: 875 EALAIM 880



 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 127/244 (52%), Positives = 165/244 (67%), Gaps = 22/244 (9%)

Query: 71  DFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVEL 130
           ++   + PTP+LD V  P+ +K+L++KEL+QLA E+RS++   VSKT   L SSL  VEL
Sbjct: 62  EYHSQRPPTPLLDTVNYPIHMKNLSLKELQQLADELRSDVIFHVSKTGGHLGSSLGVVEL 121

Query: 131 TVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFN 190
           TVALH+VF+ P DKILWDVG Q+Y HKILTGRR  + T+R+ +G+SG+T RSESEYD F 
Sbjct: 122 TVALHYVFNTPQDKILWDVGHQSYPHKILTGRRDKMPTMRQTNGLSGFTKRSESEYDSFG 181

Query: 191 AGHGCNSVSAGL---------------------GMAVARDIKGKRECIVTVISNGTTMAG 229
            GH   ++SA L                     GMAV RD+KG +  +V VI +G   AG
Sbjct: 182 TGHSSTTISAALGNLLFFLQSLCIELPAYVRLAGMAVGRDLKGGKNNVVAVIGDGAMTAG 241

Query: 230 QAYEAMSNAGYLDSNMIVILNDSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLR 288
           QAYEAM+NAGYLDS+MIVILND++  SL     + P   + ALSS LS++QSS+  R+LR
Sbjct: 242 QAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPAPPVGALSSALSKLQSSRPLRELR 301

Query: 289 EVAK 292
           EVAK
Sbjct: 302 EVAK 305


>gi|325292127|ref|YP_004277991.1| Deoxyxylulose-5-phosphate synthase [Agrobacterium sp. H13-3]
 gi|325059980|gb|ADY63671.1| Deoxyxylulose-5-phosphate synthase [Agrobacterium sp. H13-3]
          Length = 636

 Score =  558 bits (1439), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 296/639 (46%), Positives = 402/639 (62%), Gaps = 20/639 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V  P  LK +  ++L +LA E+R E+   VS T   L + L  VELT+A+H VF
Sbjct: 4   TPLLDRVNFPSDLKEIDDRDLPELARELRDEMIDAVSSTGGHLGAGLGVVELTIAIHKVF 63

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D++++DVG Q Y HKILTGRR  I TLR++ G+SG+T R+ESEYD F AGH   S+
Sbjct: 64  NTPEDRLIFDVGHQCYPHKILTGRRERIRTLRQEGGLSGFTRRAESEYDDFGAGHSSTSI 123

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVA  +      ++ VI +G+  AG A+EA++NAG LD+ +IVILND+  S+ P
Sbjct: 124 SAGLGMAVAAGLDQSDRKVIAVIGDGSMSAGMAFEALNNAGALDARLIVILNDNDMSIAP 183

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S+ L+R+ S +++   R+  K +T  +G+ +     +   +ARG + 
Sbjct: 184 PT--------GAMSAYLARLASGRTYMGFRDFGKKLTAYLGKTIDRAITRAVTHARGYV- 234

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G TLFEELG Y+IGP+DGH+ + L+ VL+ V      GPVL+HVVT++ +       +
Sbjct: 235 -TGGTLFEELGFYHIGPIDGHSFDHLLPVLRNVRD-NQKGPVLIHVVTQKGK---GYAPA 289

Query: 379 EAIEKQQEGASDSNSLPFGNY-----SRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
           EA   +  G +  + +          + +Y   F EAL+ EA  D  I+ V A M     
Sbjct: 290 EAAADKYHGVNKFDVITGAQAKAKPNAPSYTSVFAEALIQEATLDDKIIGVTAAMPNGTG 349

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L    E FP R FDVG+AEQHAVTF+AGLA  G KPFC + S FLQR YDQ+V+DV  Q 
Sbjct: 350 LDKMAELFPARTFDVGIAEQHAVTFAAGLAADGYKPFCALYSTFLQRGYDQLVHDVAIQS 409

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPVRF I  AG VG+DGPT  G+FD TF++ LP M+VMA SDE EL  MV T A+ D+ P
Sbjct: 410 LPVRFPIDRAGFVGADGPTHAGSFDTTFLATLPGMVVMAASDEAELKHMVRTAAAYDEGP 469

Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
           + FRYPRG  V  ++P  RG  ++IGKG+++ EG  VALL +G  +  CL A   L   G
Sbjct: 470 ISFRYPRGEGVGVEMPA-RGEILQIGKGRIIKEGTKVALLSFGTRLAECLAAAEDLDAAG 528

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKW 673
           +  TVADARF KPLD+ L+R+L  +H  L+T+EEGS+GGFG+HV HF+A  GLLD G K 
Sbjct: 529 LSTTVADARFAKPLDLDLIRQLAAHHEVLVTIEEGSVGGFGAHVLHFMASAGLLDHGPKV 588

Query: 674 RPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
           R + LPD+++E A P    A AGL    I +T  + LG+
Sbjct: 589 RTLTLPDHWVEQAKPETMYANAGLDRAGIVSTVFNALGQ 627


>gi|334344767|ref|YP_004553319.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingobium
           chlorophenolicum L-1]
 gi|334101389|gb|AEG48813.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingobium
           chlorophenolicum L-1]
          Length = 641

 Score =  558 bits (1437), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 306/648 (47%), Positives = 401/648 (61%), Gaps = 34/648 (5%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           D+  TP+LD V  P  L+ L   +L+QLA E+R E+ S V  T   L S L  VELT A+
Sbjct: 3   DRPSTPLLDQVVWPADLRKLQPDQLRQLADELRQEVISAVGVTGGHLGSGLGVVELTTAI 62

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H+VF  P DK++WDVG Q Y HKILTGRR  I TLR+  G+SG+T R+ESE+DPF A H 
Sbjct: 63  HYVFDTPNDKLVWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTKRAESEFDPFGAAHS 122

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA LG AVA  ++G+    + VI +G+  AG AYEAM+NA    + +IVILND+  
Sbjct: 123 STSISAALGFAVANKMQGRPGKGIAVIGDGSMSAGMAYEAMNNAREAGNRLIVILNDNDM 182

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+ P         +  LS+ L+R+ SS+ F  LR++AK + +R+ R +H  A K DE+AR
Sbjct: 183 SIAP--------PVGGLSAYLARLVSSREFLGLRDLAKRLARRLPRPLHNAARKTDEFAR 234

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---- 370
           GM    G TLFEELG YY+GP+DGHN++ LI VL+ V    + GP LVHVVT++ +    
Sbjct: 235 GMA--MGGTLFEELGFYYVGPIDGHNLDQLIPVLENVRD-AAEGPCLVHVVTQKGKGYAP 291

Query: 371 ------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVV 424
                 +    QK + I   Q+ A      P G  S  Y   F +AL+ EAE+D  +  +
Sbjct: 292 AEAAADKYHGVQKFDVITGTQDKA------PPGPPS--YTGVFAKALIAEAERDPAVCAI 343

Query: 425 HAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQ 484
            A M     L  F   FP+R FDVG+AEQHAVTF+AGLA  G++PFC I S FLQRAYDQ
Sbjct: 344 TAAMPSGTGLDKFGAAFPDRTFDVGIAEQHAVTFAAGLAAQGMRPFCAIYSTFLQRAYDQ 403

Query: 485 VVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVA 544
           VV+DV  Q LPVRF I  AGLVG+DG T  G+FD+T++S LPN +VMA +DE ELV MV 
Sbjct: 404 VVHDVAIQNLPVRFAIDRAGLVGADGSTHAGSFDVTYLSSLPNFVVMAAADEAELVHMVH 463

Query: 545 TVASIDDRPVCFRYPRGAIVRTDLPGYRGIP--IEIGKGKVLVEGKDVALLGYGAMVQNC 602
           T A  DD P+  RYPRG  V   LP     P  +EIGKG+++ EG+ VA+L  G  ++  
Sbjct: 464 TCAVHDDGPIAVRYPRGNGVGIALP---ETPERLEIGKGRIVREGRQVAILSLGTRLEEA 520

Query: 603 LKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIA 662
           LKA  +L   G+  TVAD RF KPLD  ++R L   H   +T+EEGSIGG G+HV    +
Sbjct: 521 LKAAEVLEAKGLSTTVADLRFAKPLDEAMIRRLLTTHEVAVTIEEGSIGGLGAHVLTMAS 580

Query: 663 LDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
             GL+D+G+K R + LPD + +   P +Q A A L    I  T L+ L
Sbjct: 581 DQGLIDNGLKLRTMRLPDIFQDQDKPEKQYADARLDAEAIVDTVLTAL 628


>gi|386348075|ref|YP_006046323.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodospirillum rubrum F11]
 gi|346716511|gb|AEO46526.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodospirillum rubrum F11]
          Length = 622

 Score =  558 bits (1437), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 298/620 (48%), Positives = 388/620 (62%), Gaps = 18/620 (2%)

Query: 96  IKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYA 155
           + +L+QLA E+R+E+   VS T   L S L  VELTVALHHVF  P D+I+WDVG Q Y 
Sbjct: 1   MAQLEQLAREVRAEMIDAVSVTGGHLGSGLGVVELTVALHHVFDTPDDRIIWDVGHQCYP 60

Query: 156 HKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRE 215
           HKILTGRR  I TLR+  G+SG+T R ES YDPF AGH   S+SAGLGMA+   + G   
Sbjct: 61  HKILTGRRDRIRTLRQGGGLSGFTLREESPYDPFGAGHSSTSISAGLGMAIGSALAGDAR 120

Query: 216 CIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKIEESPKTSINALSSTL 275
            +V VI +G+  AG AYEAM+NAG   S +IVILND+  S+ P         + A+S+ L
Sbjct: 121 DVVAVIGDGSMSAGMAYEAMNNAGAAKSRLIVILNDNDMSIAP--------PVGAMSAYL 172

Query: 276 SRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGP 335
           SR+ SSKS+  +R +AK +  R+   +   A + +EYARGM+   G TLFEELG YY+GP
Sbjct: 173 SRLLSSKSWLSIRTLAKEIVARLPDALERTAKRAEEYARGMV-TGGGTLFEELGFYYVGP 231

Query: 336 VDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSEAIEKQQEGASDSNSL- 394
           +DGH ++ L+ VL+ V   G  GPVL+HVVT++ +       +E    +  G S  N + 
Sbjct: 232 IDGHRMDHLVPVLRNVREAGRDGPVLIHVVTQKGK---GYAPAENAPDKYHGVSRFNVVT 288

Query: 395 ----PFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGM 450
                    + +Y   F + LV  A KD  IV V A M     L      +P+R FDVG+
Sbjct: 289 GVQEKAKPQAPSYTAVFGKQLVAAAAKDHRIVGVTAAMPGGTGLDKLATAYPQRCFDVGI 348

Query: 451 AEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDG 510
           AEQHAVTF+AGLAC GLKPF  + S+FLQR YDQVV+DV  Q+LPVRF I  AG VG+DG
Sbjct: 349 AEQHAVTFAAGLACEGLKPFVALYSSFLQRGYDQVVHDVVLQKLPVRFAIDRAGFVGADG 408

Query: 511 PTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYPRGAIVRTDLPG 570
            T  G FD+ F+ CLPN++VM  +DE EL  MV T A  D  P+  RYPRG  V  ++P 
Sbjct: 409 ATHGGVFDMAFLGCLPNLVVMCAADEAELARMVVTAAGHDSGPIALRYPRGEGVGVEIP- 467

Query: 571 YRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIK 630
               P+ IGKG+++ EGK VALL  G  +Q+CL+A  +L+  G+  TVADARF KP D +
Sbjct: 468 EDPQPLAIGKGRIVREGKGVALLSIGTRLQSCLEACEILAARGLTPTVADARFLKPFDEE 527

Query: 631 LVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQ 690
           LV +L   H  LI VEEG+IGGFG+HV+ ++   GLLD G+K R + +PD + EH +P  
Sbjct: 528 LVADLAARHEVLIVVEEGAIGGFGAHVATWLTNQGLLDGGLKLRALHIPDRFFEHDAPEV 587

Query: 691 QLALAGLTGHHIAATALSLL 710
           Q A AG+    I    L  L
Sbjct: 588 QCAKAGIDAQAITTAVLDAL 607


>gi|167647276|ref|YP_001684939.1| 1-deoxy-D-xylulose-5-phosphate synthase [Caulobacter sp. K31]
 gi|254782067|sp|B0T3X7.1|DXS_CAUSK RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|167349706|gb|ABZ72441.1| deoxyxylulose-5-phosphate synthase [Caulobacter sp. K31]
          Length = 638

 Score =  557 bits (1436), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 292/643 (45%), Positives = 393/643 (61%), Gaps = 30/643 (4%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD + +P   +  ++ ELKQLA E+R+E    VS T   L + L  VELTVALHHVF
Sbjct: 5   TPLLDTISSPADTRGFSVAELKQLASEVRAETIDAVSVTGGHLGAGLGVVELTVALHHVF 64

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D ++WDVG Q Y HKILTGRR  I TLR+  G+SG+T R+ES YDPF A H   S+
Sbjct: 65  ETPKDIVIWDVGHQAYPHKILTGRRDRIKTLRQGGGLSGFTKRAESVYDPFGAAHAATSI 124

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LG   ARD KG+   ++ VI +G+  AG AYEAM+ A      +IVILND+  S+ P
Sbjct: 125 SAALGFCAARDAKGENNSVIAVIGDGSMSAGMAYEAMNAAVDTTKRLIVILNDNDMSIAP 184

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                    +  +S+ L+ + S  ++R++R++ K + +++   + + A K +EYARGM+ 
Sbjct: 185 --------PVGGMSAYLANLVSGGAYRKVRKLGKTVVEKLPTPIRDAARKAEEYARGMV- 235

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR-------- 370
             G T FEELG +Y+GP+DGH+++ L+SVL  V       PVLVHVVT++ +        
Sbjct: 236 -TGGTFFEELGFHYVGPIDGHDMDALVSVLNNVKHFDEK-PVLVHVVTQKGKGYAPAEGA 293

Query: 371 --RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGM 428
             +     K + +  QQ  A+            +Y   F + L+  A  D  I+ + A M
Sbjct: 294 ADKLHAVVKFDVVTGQQHKAAAGPP--------SYTKVFAQELIKHAAVDDKIMAITAAM 345

Query: 429 EMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVND 488
                L LF + +PER FDVG+AEQHAVTF+AGLA  G+KPF  I S FLQR YDQVV+D
Sbjct: 346 PSGTGLDLFGKAYPERTFDVGIAEQHAVTFAAGLAADGMKPFVAIYSTFLQRGYDQVVHD 405

Query: 489 VDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVAS 548
           V  QRLPVRF +  AGLVG+DGPT  G FD+ FM  LP M++MA +DE EL  MV+T  +
Sbjct: 406 VAIQRLPVRFAMDRAGLVGADGPTHAGTFDLGFMGALPGMVLMAAADEVELAHMVSTAVA 465

Query: 549 IDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARAL 608
           IDDRP  FRYPRG  +   +P     P+EIGKG+++ EG  VA++  G  +  CLKA  L
Sbjct: 466 IDDRPSAFRYPRGEGLGLTIPDL-AAPLEIGKGRIVREGTSVAIVSLGTRLAECLKAADL 524

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLD 668
           L+  G+  TVADARF KPLD+ ++  L + H  +ITVEEG++GGFG+ V   +A  G LD
Sbjct: 525 LAARGLSATVADARFAKPLDVDMLLRLAREHEAIITVEEGAMGGFGAFVLQALATHGALD 584

Query: 669 SGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
            G+K R +VLPD + +   P    A AGL    I   ALS LG
Sbjct: 585 RGLKIRTLVLPDVFQDQDKPDLMYAQAGLDAEGILRGALSALG 627


>gi|386350703|ref|YP_006048951.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodospirillum rubrum F11]
 gi|346719139|gb|AEO49154.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodospirillum rubrum F11]
          Length = 622

 Score =  557 bits (1435), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 298/620 (48%), Positives = 388/620 (62%), Gaps = 18/620 (2%)

Query: 96  IKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYA 155
           + +L+QLA E+R+E+   VS T   L S L  VELTVALHHVF  P D+I+WDVG Q Y 
Sbjct: 1   MAQLEQLAREVRAEMIDAVSVTGGHLGSGLGVVELTVALHHVFDTPDDRIIWDVGHQCYP 60

Query: 156 HKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRE 215
           HKILTGRR  I TLR+  G+SG+T R ES YDPF AGH   S+SAGLGMA+   + G   
Sbjct: 61  HKILTGRRDRIRTLRQGGGLSGFTLREESPYDPFGAGHSSTSISAGLGMAIGSALAGDAR 120

Query: 216 CIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKIEESPKTSINALSSTL 275
            +V VI +G+  AG AYEAM+NAG   S +IVILND+  S+ P         + A+S+ L
Sbjct: 121 DVVAVIGDGSMSAGMAYEAMNNAGAAKSRLIVILNDNDMSIAPP--------VGAMSAYL 172

Query: 276 SRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGP 335
           SR+ SSKS+  +R +AK +  R+   +   A + +EYARGM+   G TLFEE+G YY+GP
Sbjct: 173 SRLLSSKSWLSIRTLAKEIVARLPDALERTAKRAEEYARGMV-TGGGTLFEEMGFYYVGP 231

Query: 336 VDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSEAIEKQQEGASDSNSL- 394
           +DGH ++ L+ VL+ V   G  GPVL+HVVT++ +       +E    +  G S  N + 
Sbjct: 232 IDGHRMDHLVPVLRNVREAGRDGPVLIHVVTQKGK---GYAPAENAPDKYHGVSRFNVVT 288

Query: 395 ----PFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGM 450
                    + +Y   F + LV  A KD  IV V A M     L      +P+R FDVG+
Sbjct: 289 GVQEKAKPQAPSYTAVFGKQLVAAAAKDHRIVAVTAAMPGGTGLDKLAAAYPQRCFDVGI 348

Query: 451 AEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDG 510
           AEQHAVTF+AGLAC GLKPF  + S+FLQR YDQVV+DV  Q+LPVRF I  AG VG+DG
Sbjct: 349 AEQHAVTFAAGLACEGLKPFVALYSSFLQRGYDQVVHDVVLQKLPVRFAIDRAGFVGADG 408

Query: 511 PTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYPRGAIVRTDLPG 570
            T  G FD+ F+ CLPN++VM  +DE EL  MV T A  D  P+  RYPRG  V  ++P 
Sbjct: 409 ATHGGVFDMAFLGCLPNLVVMCAADEAELARMVVTAAGHDSGPIALRYPRGEGVGVEIP- 467

Query: 571 YRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIK 630
               P+ IGKG+++ EGK VALL  G  +Q+CL+A  +L+  G+  TVADARF KP D +
Sbjct: 468 EDPQPLAIGKGRIVREGKGVALLSIGTRLQSCLEACEILAARGLTPTVADARFLKPFDEE 527

Query: 631 LVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQ 690
           LV +L   H  LI VEEG+IGGF SHV+ ++A  GLLD G+K R + +PD + EH +P  
Sbjct: 528 LVADLAARHEVLIVVEEGAIGGFCSHVATWLANQGLLDGGLKLRALHIPDRFFEHDAPEV 587

Query: 691 QLALAGLTGHHIAATALSLL 710
           Q A AG+    I    L  L
Sbjct: 588 QCAKAGIDAQAITTAVLDAL 607


>gi|254293554|ref|YP_003059577.1| 1-deoxy-D-xylulose-5-phosphate synthase [Hirschia baltica ATCC
           49814]
 gi|254042085|gb|ACT58880.1| deoxyxylulose-5-phosphate synthase [Hirschia baltica ATCC 49814]
          Length = 642

 Score =  557 bits (1435), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 301/640 (47%), Positives = 401/640 (62%), Gaps = 24/640 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD + +P  LK+ +I+EL ++A E+R E   +VS T   L S+L  VELTVA+H VF
Sbjct: 5   TPLLDTISSPADLKTKSIEELVEVADELRRETIDVVSTTGGHLGSALGVVELTVAIHKVF 64

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P DK++WDVG Q Y HKILT RR+ I TLR+  G+SG+T RSESEYDPF A H   S+
Sbjct: 65  DTPDDKLVWDVGHQCYPHKILTERRAEIRTLRQGGGLSGFTKRSESEYDPFGAAHAGTSI 124

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAG G A ARD+K +   +V VI +G+  AG AYEAM++ G +   MIVILND+  S+ P
Sbjct: 125 SAGAGFATARDLKDEDRNVVCVIGDGSMTAGMAYEAMNHMGGMHKRMIVILNDNDMSIAP 184

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                    + ALS  LS+  SSK +RQ R+  K M K +  G+ + A K + YAR    
Sbjct: 185 --------PVGALSHYLSKTVSSKGYRQFRKAGKMMAKTV--GLEKPAKKAEHYARDF-- 232

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G  +F+ LG YY+GP+DGH+++ LI VL+ V  + + GPVLVHVVTE+ +  E  +KS
Sbjct: 233 ALGGAMFDALGFYYVGPIDGHDLDTLIPVLENVRDMKN-GPVLVHVVTEKGKGFEPAEKS 291

Query: 379 EAIEKQQEGASDSNSLPFGNYSR------TYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
                +  G S  N +  G  ++      +Y + F + L+  A+ D+ IV + A M    
Sbjct: 292 ---ADKYHGVSKFNVIT-GEQAKSKPNAPSYTNVFAQELIRLAKDDERIVGITAAMPSGT 347

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            +  F + FPER FDVG+AEQH VTF+A +A  G+KPFC I S FLQRAYD VV+DV  Q
Sbjct: 348 GMDKFGDAFPERMFDVGIAEQHGVTFAAAMAADGMKPFCAIYSTFLQRAYDSVVHDVAIQ 407

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
           +LPVRF I  AGLVG+DG T  G+FDI ++  LP+ ++MA SDE EL  MVAT  +IDD 
Sbjct: 408 KLPVRFAIDRAGLVGADGATHAGSFDIGYLGALPDFVLMAASDEAELQRMVATAHAIDDC 467

Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
           P  FR+PRG  +  DL   R  P+EIGKG+++ EG  +A+L  GA +Q  L A  +L   
Sbjct: 468 PSAFRFPRGEGIGIDL-WERAEPLEIGKGRIVKEGTTIAILALGARLQEALHAADMLEAQ 526

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 672
           G   TVADARF KPLD  L+  L + H  LITVEEG+ GGFGS V   +A  G LD+G++
Sbjct: 527 GFSTTVADARFAKPLDTDLIERLAKEHEVLITVEEGARGGFGSFVLEHLAKVGALDNGLR 586

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
            RP+ LPD + +   P      AGL+   IA  A++ LGR
Sbjct: 587 IRPMTLPDVFQDQNKPELMYEDAGLSAKAIATQAIAALGR 626


>gi|390167485|ref|ZP_10219472.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingobium indicum B90A]
 gi|389589893|gb|EIM67901.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingobium indicum B90A]
          Length = 641

 Score =  556 bits (1434), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 308/648 (47%), Positives = 396/648 (61%), Gaps = 34/648 (5%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           D+  TP+LD V  P  L+ L    L+QLA E+R E+ S V  T   L S L  VELT A+
Sbjct: 3   DRPSTPLLDQVVWPADLRKLQPDRLRQLADELRQEVISAVGVTGGHLGSGLGVVELTTAI 62

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H+VF  P DK++WDVG Q Y HKILTGRR  I TLR+  G+SG+T R+ESEYDPF A H 
Sbjct: 63  HYVFDTPNDKLVWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTKRAESEYDPFGAAHS 122

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA LG AVA  ++GK    + VI +G+  AG AYEAM+NA    + +IVILND+  
Sbjct: 123 STSISAALGFAVANRMQGKPGKGIAVIGDGSMSAGMAYEAMNNAREAGNRLIVILNDNDM 182

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+ P         +  LS+ L+R+ SS+ F  LR++AK + +R+ R +H  A K DE+AR
Sbjct: 183 SIAP--------PVGGLSAYLARLVSSREFLGLRDLAKRLARRLPRPLHNAARKTDEFAR 234

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---- 370
           GM    G TLFEELG YY+GP+DGHN++ LI VL+ V    + GP LVHVVT++ +    
Sbjct: 235 GMA--MGGTLFEELGFYYVGPIDGHNLDQLIPVLENVRD-AAEGPCLVHVVTQKGKGYAP 291

Query: 371 ------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVV 424
                 +    QK + I   Q  A      P G  S  Y   F +AL+ EAE+D  I  +
Sbjct: 292 AEAAADKYHGVQKFDVITGAQAKA------PPGPPS--YTGVFAKALIAEAERDPAICAI 343

Query: 425 HAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQ 484
            A M     L  F   FP+R FDVG+AEQHAVTF+AGLA  G++PFC I S FLQRAYDQ
Sbjct: 344 TAAMPSGTGLDKFGAAFPDRTFDVGIAEQHAVTFAAGLAAQGMRPFCAIYSTFLQRAYDQ 403

Query: 485 VVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVA 544
           VV+DV  Q LPVRF I  AGLVG+DG T  G+FD+T+++ LPN +VMA +DE ELV MV 
Sbjct: 404 VVHDVAIQNLPVRFAIDRAGLVGADGSTHAGSFDVTYLASLPNFVVMAAADEAELVHMVH 463

Query: 545 TVASIDDRPVCFRYPRGAIVRTDLPGYRGIP--IEIGKGKVLVEGKDVALLGYGAMVQNC 602
           T A  DD P+  RYPRG      LP     P  +EIGKG+++ EG+ VA+L  G  ++  
Sbjct: 464 TCAVHDDGPIAVRYPRGNGTGIALP---ATPERLEIGKGRIVREGRQVAILSLGTRLEEA 520

Query: 603 LKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIA 662
           LKA   L   G+  TVAD RF KPLD  L+R L   H   +T+EEGSIGG G+HV    +
Sbjct: 521 LKAAETLEAKGLSTTVADLRFAKPLDEALIRRLLTTHEVAVTIEEGSIGGLGAHVLTMAS 580

Query: 663 LDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
             GL+D+G+K R + LPD + +   P  Q A A L    I  T L+ L
Sbjct: 581 DQGLIDNGLKLRTMRLPDIFQDQDKPENQYADARLDAGAIVDTVLTAL 628


>gi|315498416|ref|YP_004087220.1| deoxyxylulose-5-phosphate synthase [Asticcacaulis excentricus CB
           48]
 gi|315416428|gb|ADU13069.1| deoxyxylulose-5-phosphate synthase [Asticcacaulis excentricus CB
           48]
          Length = 640

 Score =  556 bits (1433), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 291/641 (45%), Positives = 401/641 (62%), Gaps = 26/641 (4%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD +  P  ++ L+  ELK LA E+R+E   +VSKT   L S+L  VELTVALHHVF
Sbjct: 6   TPVLDTLTVPEAIRHLSAAELKTLADEVRAETIDVVSKTGGHLGSALGVVELTVALHHVF 65

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D ++WDVG Q Y HKILTGRR  I +LR+  G+SG+T RSES YDPF A H   S+
Sbjct: 66  ETPSDILIWDVGHQCYPHKILTGRRERIRSLRQGGGLSGFTKRSESPYDPFGAAHAATSI 125

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LG   ARD KG+   +V VI +G+  AG AYEAM+NA     N+ VILND+  S+ P
Sbjct: 126 SAALGFCAARDHKGETNKVVAVIGDGSMSAGMAYEAMNNAAETTRNLTVILNDNDMSIAP 185

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                    +  +S+ L+ + S  +++ +R   K + +R+ R + E   K +E++R  + 
Sbjct: 186 --------PVGGMSAYLANLVSGGAYQAVRRFGKSVAERLPRALFEMVRKGEEFSRTYV- 236

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G T FEELG YY+GP+DGH++++L+SV + V  +    PVLVHVVT++ +       +
Sbjct: 237 -TGGTFFEELGFYYVGPIDGHDMDNLLSVFKRVRDITDR-PVLVHVVTQKGK---GYAPA 291

Query: 379 EAIEKQQEGASDSNSL------PFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
           EA   +  G +  + +      P  N + +Y + F   L+ +A+ D  +V + A M    
Sbjct: 292 EAASDKYHGVAKFDVITGEQAKPKAN-APSYTEVFAAELIKQAQIDPKVVAITAAMPSGT 350

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            L  F E FP R +DVG+AEQHAVTF+AGLA  G+KPFC + S FLQR YDQV +DV  Q
Sbjct: 351 GLDRFAEVFPTRCYDVGIAEQHAVTFAAGLAADGMKPFCALYSTFLQRGYDQVAHDVALQ 410

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
            LPVRF I  AGLVG+DG T  G FDI ++  LP M++MA +DE EL  M+AT  + DD 
Sbjct: 411 DLPVRFAIDRAGLVGADGATHAGTFDIGYLGTLPGMMIMAAADEAELARMIATATAYDDG 470

Query: 553 PVCFRYPRGAIVRTDLPGYRGIP--IEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLS 610
           P  FRYPRG  V  ++P    +P  + IG+G+++ EG  VA+L  GA +   LKA  LL 
Sbjct: 471 PSAFRYPRGEGVGVEIP---AVPETLAIGRGRIVREGSKVAILSLGARLPEALKAADLLG 527

Query: 611 KLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSG 670
             G+  TVADARF KPLD +L+ +L ++H  LITVEEG++GGFG+ V H++A +G LD+G
Sbjct: 528 ARGLSTTVADARFAKPLDKELILQLARHHECLITVEEGAMGGFGAFVLHYLAGEGALDNG 587

Query: 671 VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
           +K R + LPD + +H  P +  A AGL    IAA+A+  LG
Sbjct: 588 LKIRTLTLPDRFQDHDKPEKMYADAGLDAQGIAASAMKALG 628


>gi|222147754|ref|YP_002548711.1| 1-deoxy-D-xylulose-5-phosphate synthase [Agrobacterium vitis S4]
 gi|254782057|sp|B9JSL2.1|DXS_AGRVS RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|221734742|gb|ACM35705.1| 1-deoxy-D-xylulose-5-phosphate synthase [Agrobacterium vitis S4]
          Length = 639

 Score =  556 bits (1433), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 295/643 (45%), Positives = 405/643 (62%), Gaps = 22/643 (3%)

Query: 76  KEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALH 135
           K  TP+LD V  P  L+ +  K++ Q+A E+R E+   VS T   L + L  VELT+A+H
Sbjct: 4   KPNTPLLDQVVFPSDLRKIEDKDMPQVARELRDEMIDAVSVTGGHLGAGLGVVELTLAIH 63

Query: 136 HVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGC 195
            VF+ P D++++DVG Q Y HKILTGRR  I TLR++ G+SG+T R+ESEYDPF A H  
Sbjct: 64  KVFNTPEDRLIFDVGHQCYPHKILTGRRERIRTLRQEHGLSGFTKRAESEYDPFGAAHSS 123

Query: 196 NSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHS 255
            S+SAGLGMAVA ++      ++ VI +G   AG A+EA++NAG LD+ +IVILND+  S
Sbjct: 124 TSISAGLGMAVAAELGQTDRKVIAVIGDGAMSAGMAFEALNNAGALDARLIVILNDNDMS 183

Query: 256 LHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARG 315
           + P           A+S+ L+R+ S +++  +RE+ K +T  +G+ +     +  E+ARG
Sbjct: 184 IAP--------PTGAMSAYLARLASGRTYMGMREIGKKLTAYLGKNIDRAITRAVEHARG 235

Query: 316 MIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDT 375
            +   G T+FEE+G Y+IGP+DGH+ + L+ VL+ V    + GPVL+HVVT++ +     
Sbjct: 236 YV--TGGTMFEEMGFYHIGPIDGHSFDHLLPVLRNVRD-NAKGPVLIHVVTQKGK---GY 289

Query: 376 QKSEAIEKQQEGASDSNSLPFGNYSR------TYDDCFIEALVMEAEKDKDIVVVHAGME 429
             +EA   +  G +  + +  G  ++      +Y   F +ALV EA  D  IV + A M 
Sbjct: 290 APAEAAADKYHGVNTFDVIT-GTQAKAKPNAPSYTAVFADALVEEARLDDKIVGITAAMP 348

Query: 430 MDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDV 489
               L   Q  FPER FDVG+AEQHAVTF+AGLA  G KPFC + S FLQR YDQVV+DV
Sbjct: 349 SGTGLDKLQNLFPERTFDVGIAEQHAVTFAAGLAAEGYKPFCALYSTFLQRGYDQVVHDV 408

Query: 490 DQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASI 549
             Q LPVRF I  AG VG+DGPT  G+FD  F++ LP  +VMA +DE EL  MV T A+ 
Sbjct: 409 AIQGLPVRFPIDRAGFVGADGPTHAGSFDTGFLASLPGFVVMAAADEAELKHMVRTAAAY 468

Query: 550 DDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALL 609
           D+ P+ FRYPRG  V   +P  RG  + IGKG+++ EG  VALL +G  +  CL A   L
Sbjct: 469 DEGPISFRYPRGEGVGVQMP-ERGEILPIGKGRIIKEGSKVALLSFGTRLAECLVAAEDL 527

Query: 610 SKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDS 669
              G+  TVADARF KPLD+ L+R+L ++H  LITVEEG++GGFGS V H +A +GLLD 
Sbjct: 528 DAAGLPTTVADARFAKPLDLDLIRQLARHHAVLITVEEGAVGGFGSQVLHMLANEGLLDH 587

Query: 670 GVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
           G+K R +VLPD +++ A P      AGL    I +T  + L R
Sbjct: 588 GLKVRSLVLPDLWMDQAKPDVMYEKAGLDAKGIVSTVFTALSR 630


>gi|357977645|ref|ZP_09141616.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingomonas sp. KC8]
          Length = 641

 Score =  556 bits (1433), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 300/649 (46%), Positives = 396/649 (61%), Gaps = 22/649 (3%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           ++  TP+LD V+ P  L+ L  ++L  L  E+R E+ S VS T   L + L  VELTVAL
Sbjct: 3   ERPKTPLLDTVDTPGDLRKLKPEQLGDLVRELRQEMVSAVSVTGGHLGAGLGVVELTVAL 62

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H+VF+ P D ++WDVG Q Y HKILTGRR  I TLR+  G+SG+T RSESEYDPF A H 
Sbjct: 63  HYVFNTPDDILIWDVGHQAYPHKILTGRRDRIRTLRQGGGLSGFTKRSESEYDPFGAAHS 122

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA LG AVA  + G     + VI +G   AG AYEAM+NA    + +IVILND+  
Sbjct: 123 STSISAALGFAVANKLAGDPGKAIAVIGDGAMSAGMAYEAMNNAEQAGNRLIVILNDNDM 182

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+ P         +  LS+ L+R+ SS+ F  LR++AK + +++ R +H+ A K DE+AR
Sbjct: 183 SIAPP--------VGGLSAYLARMVSSRPFLSLRDLAKRLARKLPRPLHDAARKTDEFAR 234

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAED 374
           GM    G TLFEELG YY+GP+DGHN++ LI +L+ V   G  GP+L+HVVT++ +    
Sbjct: 235 GMT--MGGTLFEELGFYYVGPIDGHNLDHLIPILENVRDAGE-GPILIHVVTQKGKGYAP 291

Query: 375 TQ----KSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
            +    K   ++K           P G  S  Y   F +AL+ EA +D  +  + A M  
Sbjct: 292 AEAAADKYHGVQKFDVVTGAQAKAPPGPPS--YTGVFAQALIAEATRDDKVCAITAAMPS 349

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L  F   FP+R FDVG+AEQHAVTF+AGL+  G +PFC I S FLQRAYDQVV+DV 
Sbjct: 350 GTGLDKFATLFPDRSFDVGIAEQHAVTFAAGLSAQGYRPFCAIYSTFLQRAYDQVVHDVA 409

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q LPVRF I  AGLVG+DG T  G+FDIT+++ LPN +VMA +DE EL  MV T+A  D
Sbjct: 410 IQNLPVRFAIDRAGLVGADGATHAGSFDITYLASLPNFVVMAAADEAELTHMVHTMALHD 469

Query: 551 DRPVCFRYPRGAIVRTDLPGYRGIP--IEIGKGKVLVEGKDVALLGYGAMVQNCLKARAL 608
             P+  RYPRG      +P     P  + IGKG+++ EGK VA+L  G  +    KA   
Sbjct: 470 SGPIAVRYPRGNGTGVGIP---TTPERLAIGKGRLVREGKTVAILSLGTRLGEAEKAADQ 526

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLD 668
           L  LG+  +VAD RF KPLD  L+R L   H   +T+EEGS+GG G+HV    + +GL+D
Sbjct: 527 LEALGLSTSVADLRFAKPLDEALIRTLLTTHEVAVTIEEGSVGGLGAHVLTLASDEGLID 586

Query: 669 SGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREAL 717
            G+K R + LPD + +H  P  Q A AGL    I ATAL+ L R    L
Sbjct: 587 GGLKLRTMRLPDIFQDHEKPETQYAEAGLDAEAIVATALAALRRNNTGL 635


>gi|294012272|ref|YP_003545732.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingobium japonicum
           UT26S]
 gi|292675602|dbj|BAI97120.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingobium japonicum
           UT26S]
          Length = 644

 Score =  556 bits (1432), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 306/648 (47%), Positives = 397/648 (61%), Gaps = 34/648 (5%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           D+  TP+LD V  P  L+ L    L+QLA E+R E+ S V  T   L S L  VELT A+
Sbjct: 6   DRPSTPLLDQVVWPADLRKLQPDRLRQLADELRQEVISAVGVTGGHLGSGLGVVELTTAI 65

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H+VF  P DK++WDVG Q Y HKILTGRR  I TLR+  G+SG+T R+ESEYDPF A H 
Sbjct: 66  HYVFDTPNDKLVWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTKRAESEYDPFGAAHS 125

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA LG AVA  ++GK    + VI +G+  AG AYEAM+NA    + +IVILND+  
Sbjct: 126 STSISAALGFAVANRMQGKPGKGIAVIGDGSMSAGMAYEAMNNAREAGNRLIVILNDNDM 185

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+ P         +  LS+ L+R+ SS+ F  LR++AK + +R+ R +H  A K DE+AR
Sbjct: 186 SIAP--------PVGGLSAYLARLVSSREFLGLRDLAKRLARRLPRPLHNAARKTDEFAR 237

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---- 370
           GM    G TLFEELG YY+GP+DGHN++ LI VL+ V    + GP LVHVVT++ +    
Sbjct: 238 GMA--MGGTLFEELGFYYVGPIDGHNLDQLIPVLENVRD-AAEGPCLVHVVTQKGKGYAP 294

Query: 371 ------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVV 424
                 +    QK + I   Q  A      P G  S  Y   F +AL+ EAE+D  I  +
Sbjct: 295 AEAAADKYHGVQKFDVITGAQAKA------PPGPPS--YTGVFAKALIAEAERDPAICAI 346

Query: 425 HAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQ 484
            A M     L  F   FP+R FDVG+AEQHAVTF+AGLA  G++PFC I S FLQRAYDQ
Sbjct: 347 TAAMPSGTGLDKFGAAFPDRTFDVGIAEQHAVTFAAGLAAQGMRPFCAIYSTFLQRAYDQ 406

Query: 485 VVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVA 544
           VV+DV  Q LPVRF I  AGLVG+DG T  G+FD+T+++ LPN +VMA +DE ELV MV 
Sbjct: 407 VVHDVAIQNLPVRFAIDRAGLVGADGSTHAGSFDVTYLASLPNFVVMAAADEAELVHMVH 466

Query: 545 TVASIDDRPVCFRYPRGAIVRTDLPGYRGIP--IEIGKGKVLVEGKDVALLGYGAMVQNC 602
           T A  DD P+  RYPRG      LP     P  +EIGKG+++ EG+ VA+L  G  ++  
Sbjct: 467 TCAVHDDGPIAVRYPRGNGTGIALP---ATPERLEIGKGRIVREGRQVAILSLGTRLEEA 523

Query: 603 LKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIA 662
           LKA   L   G+  TVAD RF KPLD  L+R L   H   +T+EEG++GG G+HV    +
Sbjct: 524 LKAAETLEAKGLSTTVADLRFAKPLDEALIRRLLTTHEVAVTIEEGAVGGLGAHVLTMAS 583

Query: 663 LDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
             GL+D+G+K R + LPD + +   P +Q A A L    I  T L+ L
Sbjct: 584 DQGLIDNGLKLRTMRLPDIFQDQDKPEKQYADARLDAGAIVDTVLTAL 631


>gi|354593293|ref|ZP_09011338.1| 1-deoxy-D-xylulose-5-phosphate synthase [Commensalibacter intestini
           A911]
 gi|353673358|gb|EHD15052.1| 1-deoxy-D-xylulose-5-phosphate synthase [Commensalibacter intestini
           A911]
          Length = 672

 Score =  555 bits (1431), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 302/666 (45%), Positives = 419/666 (62%), Gaps = 39/666 (5%)

Query: 71  DFFWDKEPT----PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLA 126
           D F    PT    P+LD +  P  L +L+I++L+Q+A E+R+E    VS T   L +SL 
Sbjct: 20  DNFIKSIPTYGRFPLLDHIRFPADLNNLSIEQLEQVARELRAETIDAVSTTGGHLGASLG 79

Query: 127 AVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEY 186
            VELTVALH VF  P D ++WDVG Q Y HKILTGRR LI TLR+  G+SG+T RSES Y
Sbjct: 80  VVELTVALHAVFDTPNDSLIWDVGHQAYPHKILTGRRELIRTLRQPGGLSGFTKRSESIY 139

Query: 187 DPFNAGHGCNSVSAGLGMAVARDIKGKRE------CIVTVISNGTTMAGQAYEAMSNA-- 238
           DPF A H   S+SA LG+AVA   K K +        + VI +G+  AG AYEAM+NA  
Sbjct: 140 DPFGAAHSSTSISAALGIAVANHYKAKHDPSYKERNSIAVIGDGSITAGMAYEAMNNAAV 199

Query: 239 -GYLDSNMIVILNDSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKR 297
            G     +IVILND+  S+           + ++S  LS++ SS+ F  LR++A  + K+
Sbjct: 200 AGPGAEKLIVILNDNEMSI--------SQPVGSMSVYLSQLLSSRHFLGLRDLAARVAKK 251

Query: 298 IGRGMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSM 357
           +   + + A + +EYAR M+   G TLFEELG YY+GP+DGHN++ L+ VL+ +     +
Sbjct: 252 LPESIEKKAKRAEEYARSMM--TGGTLFEELGFYYVGPIDGHNLQQLVPVLRNLRDADQI 309

Query: 358 GPVLVHVVTEEN---RRAEDT-QKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVM 413
           GP+L+H+VT++    + AE +  K  A+ K      +    P G  S  Y   F + L+ 
Sbjct: 310 GPILLHIVTQKGHGYKPAESSGDKYHAVSKFNVITGEQTKAPPGPPS--YTSVFSKELLK 367

Query: 414 EAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCII 473
            A++D+ I+ + A M     L  FQE FP+RYFDVG+AEQHAVTF+AGLA  G++PFC I
Sbjct: 368 RAKEDEKIIAITAAMPSGTGLDKFQETFPDRYFDVGIAEQHAVTFAAGLATEGMRPFCAI 427

Query: 474 PSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAP 533
            S+FLQR YDQV++DV  Q+LPVRF I  AGLVG+DG T  G +DI ++ CLP++++MAP
Sbjct: 428 YSSFLQRGYDQVMHDVVLQKLPVRFAIDRAGLVGADGATHAGTYDIAYLGCLPDIVLMAP 487

Query: 534 SDEDELVDMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVE-----GK 588
           SDE EL+ M AT A+ D+ P+ FR+PRG  +   LP    I +EIGKG+++ E     GK
Sbjct: 488 SDEVELMHMTATAAAFDEGPIAFRFPRGPGLGLQLPNQAEI-LEIGKGRIVQEMGNQTGK 546

Query: 589 D---VALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITV 645
           +   +A+L +GA +  CLKA   L++ G   T+ DARF KPLD  L+ +L +NH  LIT+
Sbjct: 547 EKGGIAILSFGARLTECLKAAETLTEQGYSPTIIDARFAKPLDTDLINQLARNHKVLITI 606

Query: 646 EEGSIGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAAT 705
           EEGS GGFG++V   +A +GLLD+ V++RP+V+PD +I H +   Q   AGL    I   
Sbjct: 607 EEGSRGGFGAYVMEHLANNGLLDN-VRFRPMVIPDFFIHHNTQAAQYTEAGLDSASIVKV 665

Query: 706 ALSLLG 711
           AL  +G
Sbjct: 666 ALKAMG 671


>gi|295688781|ref|YP_003592474.1| deoxyxylulose-5-phosphate synthase [Caulobacter segnis ATCC 21756]
 gi|295430684|gb|ADG09856.1| deoxyxylulose-5-phosphate synthase [Caulobacter segnis ATCC 21756]
          Length = 640

 Score =  555 bits (1431), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 298/643 (46%), Positives = 400/643 (62%), Gaps = 30/643 (4%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD + +P   + L++ ELKQLA E+R+E    VS T   L + L  VELTVALHHVF
Sbjct: 5   TPLLDTIASPADTRGLSVGELKQLAAEVRAETIDAVSVTGGHLGAGLGVVELTVALHHVF 64

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D ++WDVG Q Y HKILTGRR  I TLR+  G+SG+T R+ESEYDPF A H   S+
Sbjct: 65  ETPKDILIWDVGHQAYPHKILTGRRDRIRTLRQGGGLSGFTKRAESEYDPFGAAHAATSI 124

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LG   ARD KG+   +V VI +G+  AG AYEAM+ A      +IVILND+  S+ P
Sbjct: 125 SAALGFCAARDAKGEDNSVVAVIGDGSLGAGMAYEAMNAATDTTKRLIVILNDNDMSIAP 184

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                    +  +S+ L+ + S  ++R +R++ K + +++   M E A K +EYARGM+ 
Sbjct: 185 --------PVGGMSAYLANLVSGGAYRSVRKLGKTVVEKLPSPMREAARKAEEYARGMV- 235

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRR------A 372
             G T FEELG +Y+GP+DGH+++ L+SVL+   +     PVLVH VT++ +       A
Sbjct: 236 -TGGTFFEELGFHYVGPIDGHDMDALVSVLKNAKAFADK-PVLVHCVTQKGKGYAPAEGA 293

Query: 373 ED----TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGM 428
           +D      K + +  QQ+ ++            +Y   F + L+ +AEKD  IV + A M
Sbjct: 294 DDKLHAVVKFDVVTGQQQKSAGGPP--------SYTKVFAQELIKQAEKDDKIVAITAAM 345

Query: 429 EMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVND 488
                L LF + FP+R FDVG+AEQHAVTF+AGLA  G+KPF  I S FLQR YDQVV+D
Sbjct: 346 PSGTGLDLFGKAFPDRTFDVGIAEQHAVTFAAGLAADGMKPFTAIYSTFLQRGYDQVVHD 405

Query: 489 VDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVAS 548
           V  Q LPVRF +  AGLVG+DGPT  G+FDI FM  LP M++MA +DE EL  MVAT A+
Sbjct: 406 VAIQGLPVRFAMDRAGLVGADGPTHAGSFDIGFMGALPGMVLMAAADEVELARMVATAAA 465

Query: 549 IDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARAL 608
           IDDRP  FRYPRG  +  ++P     P+EIGKG+++ EG  VA++ +G  +   LKA  L
Sbjct: 466 IDDRPSAFRYPRGEGLGLEIPANVD-PLEIGKGRIVREGTSVAIVSFGTRLSESLKAADL 524

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLD 668
           L+  G+  TV DARF KPLD+ L+  L + H  ++TVEEGS+GGFG+ V   +A  G LD
Sbjct: 525 LAARGLSATVCDARFAKPLDLDLLLRLAREHEAIVTVEEGSMGGFGAFVLQALAQHGALD 584

Query: 669 SGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
            G+K R + LPD + +   P    A AGL    +   ALS LG
Sbjct: 585 RGLKIRTLCLPDVFQDQDKPDAMYAQAGLDAEGVLRGALSALG 627


>gi|349686274|ref|ZP_08897416.1| 1-deoxy-D-xylulose-5-phosphate synthase, partial [Gluconacetobacter
           oboediens 174Bp2]
          Length = 631

 Score =  555 bits (1431), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 298/627 (47%), Positives = 400/627 (63%), Gaps = 35/627 (5%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P LD V  P  +++L++++LKQLA E+RSE    VS T   L +SL  VELTVALH VF 
Sbjct: 17  PQLDRVRMPHDMRNLSVEQLKQLAEELRSETIDAVSTTGGHLGASLGVVELTVALHAVFD 76

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG Q Y HKILTGRR  I TLR+  G+SG+T RSESEYDPF A H   S+S
Sbjct: 77  TPDDRVIWDVGHQAYPHKILTGRRERIRTLRQPGGLSGFTRRSESEYDPFGAAHSSTSIS 136

Query: 200 AGLGMAVARDIKG------KRECIVTVISNGTTMAGQAYEAMSNAGYLD---SNMIVILN 250
           AGLGMAVA  ++       +   ++ VI +G+  AG AYEAM+NA +       +IV+LN
Sbjct: 137 AGLGMAVAHHLRAEEDPSYRERNVIAVIGDGSISAGMAYEAMNNASHCGPGAERLIVVLN 196

Query: 251 DSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVD 310
           D+  S+ P +         A+S+ LSR+ SS+ F  LRE+A  M KR+   +   A K D
Sbjct: 197 DNEMSIAPPV--------GAMSNYLSRLMSSRKFLSLRELAAKMAKRLPGRLERTAKKAD 248

Query: 311 EYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN- 369
           EYARG++   G TLFEELG YY+GPVDGH++  L+ +L+ +     +GPVL+HV+TE+  
Sbjct: 249 EYARGIM--TGGTLFEELGFYYVGPVDGHDMNQLVHILRNLRDAEDVGPVLLHVITEKGH 306

Query: 370 --RRAEDT-QKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHA 426
             + AE    K  A+ K      +    P G  S  Y   F + LV +A  D  IV + A
Sbjct: 307 GYKPAESAGDKYHAVSKFNVVTGEQKKGPSGPPS--YTSVFAKELVRQASTDDRIVTITA 364

Query: 427 GMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVV 486
            M     L  F   +P+R+FDVG+AEQHAVTF+AG+A  GL+PFC I S FLQRAYDQV+
Sbjct: 365 AMPSGTGLDKFARAYPDRFFDVGIAEQHAVTFAAGMATEGLRPFCAIYSTFLQRAYDQVM 424

Query: 487 NDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATV 546
           +DV  Q+LPVRF I  AGLVG+DG T  GAFDI ++ CLP M +MAPS+E EL+ M AT 
Sbjct: 425 HDVVLQKLPVRFAIDRAGLVGADGATHAGAFDIAYLGCLPGMTLMAPSNELELLHMTATS 484

Query: 547 ASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVE-----GKD---VALLGYGAM 598
            + D+ P+  RYPRG  +  +LP    I +EIG+G+++ E     G +   +A+L  G  
Sbjct: 485 IAFDEGPIGLRYPRGGGLGLELPAAGQI-LEIGRGRIVREMTRQSGPEQGGIAILSLGPR 543

Query: 599 VQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVS 658
           + + LKA  +L+  G+  TVADARF KP+D  LV +L +NH  LIT+EEGS+GGFGS+V 
Sbjct: 544 LADALKAADMLAAQGLSPTVADARFAKPIDTALVEQLARNHAVLITIEEGSVGGFGSYVM 603

Query: 659 HFIALDGLLDSGVKWRPIVLPDNYIEH 685
             +A  GLLD  V++RP+ LPD +I+H
Sbjct: 604 THLAKTGLLDR-VRFRPMTLPDRFIDH 629


>gi|429768590|ref|ZP_19300736.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brevundimonas diminuta
           470-4]
 gi|429189010|gb|EKY29868.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brevundimonas diminuta
           470-4]
          Length = 636

 Score =  555 bits (1431), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 302/637 (47%), Positives = 398/637 (62%), Gaps = 17/637 (2%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V+ P   +   I +LKQLA E+R+E    VS T   L + L  VELTVALHHVF
Sbjct: 4   TPLLDTVKFPADTRGFDIPQLKQLAEEVRAETIDAVSVTGGHLGAGLGVVELTVALHHVF 63

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D ++WDVG Q Y HKILTGRR  I TLR+  G+SG+T RSESEYDPF A H   S+
Sbjct: 64  ETPQDILIWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTKRSESEYDPFGAAHASTSI 123

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDS-NMIVILNDSRHSLH 257
           SA LG A ARD KG    +V VI +G+  AG AYEAM+NA    S  ++VILND+  S+ 
Sbjct: 124 SAALGFAAARDAKGGNNRVVAVIGDGSMSAGMAYEAMNNAAEATSGQLMVILNDNDMSIA 183

Query: 258 PKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMI 317
           P +          +S+ L++  S  +++ +R+V K     + R   + A K +EYARGMI
Sbjct: 184 PPV--------GGMSAYLAKQVSGGTYQNIRKVGKKFVDHMPRPFRDAARKAEEYARGMI 235

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRR---AED 374
              G TLFEELG YY+GP+DGH++E+L+ +L+  A++    PVLVHVVT++ +    AE 
Sbjct: 236 --VGGTLFEELGFYYVGPIDGHDMENLVPILKNAAAITDR-PVLVHVVTQKGKGYAPAES 292

Query: 375 TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
           +        + +  S   +    N + +Y   F   L+  A+ D  ++ V A M     L
Sbjct: 293 SADKLHAVVKFDVVSGKQAKAISN-APSYTKVFGTELIKHAQADPTVMAVTAAMPSGTGL 351

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
            LF + FP+R FDVG+AEQHAVTF+AGLA  G+KP C I S FLQR YDQVV+DV  Q L
Sbjct: 352 DLFGQAFPDRTFDVGIAEQHAVTFAAGLAADGMKPVCAIYSTFLQRGYDQVVHDVAIQSL 411

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PVRF +  AGLVG+DG T  G+FDI +M  LP M++MA +DE EL  M++T  +IDDRP 
Sbjct: 412 PVRFAMDRAGLVGADGATHAGSFDIGYMGALPGMVLMAAADEAELAAMISTSLAIDDRPS 471

Query: 555 CFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGI 614
            FRYPRG  V  D+P     P+EIGKG+++ EG  VA+L  G  +Q  LKA  +L+  G+
Sbjct: 472 AFRYPRGEGVGVDIPEL-AAPLEIGKGRIVREGTSVAILSLGTRLQESLKAADMLAAKGV 530

Query: 615 DVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWR 674
             TVADARF KPLD  L+  L + H  LITVEEG++GGFG+ V   +A  G LD+G+K R
Sbjct: 531 SATVADARFAKPLDADLILRLAREHEALITVEEGAMGGFGAFVLQLLAKKGALDAGLKIR 590

Query: 675 PIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
            + LPD + +   P    A AGL   HIAA A++ LG
Sbjct: 591 TLHLPDIFQDQDKPEVMYAQAGLNAEHIAAAAVTALG 627


>gi|330991812|ref|ZP_08315761.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconacetobacter sp.
           SXCC-1]
 gi|329760833|gb|EGG77328.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconacetobacter sp.
           SXCC-1]
          Length = 652

 Score =  555 bits (1431), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 303/645 (46%), Positives = 407/645 (63%), Gaps = 35/645 (5%)

Query: 88  PLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDKILW 147
           P  L++L++++L+QLA E+RSE    VS T   L +SL  VELTVALH VF  P D+++W
Sbjct: 4   PHDLRNLSVEQLRQLADELRSETIDAVSTTGGHLGASLGVVELTVALHAVFDTPDDRVIW 63

Query: 148 DVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVA 207
           DVG Q Y HKILTGRR  I TLR+  G+SG+T RSESEYDPF A H   S+SAGLGMAVA
Sbjct: 64  DVGHQAYPHKILTGRRERIRTLRQPGGLSGFTRRSESEYDPFGAAHSSTSISAGLGMAVA 123

Query: 208 RDIKG------KRECIVTVISNGTTMAGQAYEAMSNAGYLD---SNMIVILNDSRHSLHP 258
             ++       +   ++ VI +G+  AG AYEAM+NA +       +IV+LND+  S+ P
Sbjct: 124 HHLRAEEDPSYRERNVIAVIGDGSISAGMAYEAMNNASHCGPGAERLIVVLNDNEMSIAP 183

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
            +         A+SS LSR+ SS+ F  LRE+A  M KR+   +   A K DEYARG++ 
Sbjct: 184 PV--------GAMSSYLSRLMSSRKFLSLRELAAKMAKRLPGRLERTAKKADEYARGIM- 234

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN---RRAEDT 375
             G TLFEELG YY+GPVDGH++  L+ +L+ +     +GPVL+HV+TE+    + AE  
Sbjct: 235 -TGGTLFEELGFYYVGPVDGHDMNQLVHILRNLRDAEDVGPVLLHVITEKGHGYKPAESA 293

Query: 376 -QKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
             K  A+ K      +    P G  S  Y   F + LV +A  D  IV + A M     L
Sbjct: 294 GDKYHAVSKFNVVTGEQKKGPSGPPS--YTSVFAKELVRQAATDDKIVTITAAMPSGTGL 351

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F + +P+R+FDVG+AEQHAVTF+AG+A  GL+PFC I S+FLQRAYDQV++DV  Q+L
Sbjct: 352 DKFAKAYPDRFFDVGIAEQHAVTFAAGMATEGLRPFCAIYSSFLQRAYDQVMHDVVLQKL 411

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PVRF I  AGLVG+DG T  G+FDI ++ CLP + +MAPS E EL+ M AT  + D+ P+
Sbjct: 412 PVRFAIDRAGLVGADGATHAGSFDIAYLGCLPGITLMAPSTEVELMHMTATAIAFDEGPI 471

Query: 555 CFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVE-----GKD---VALLGYGAMVQNCLKAR 606
             RYPRGA +   LP   G  +EIG+G+++ E     G +   +A+L  G  +++ LKA 
Sbjct: 472 GLRYPRGAGLGLALPAA-GEVLEIGRGRIVREMARQSGPEQGGIAILSLGPRLEHALKAA 530

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGL 666
            +L+  G+  TVADARF KP+D  LV +L +NH  LIT+EEGS+GGF S V   +A  GL
Sbjct: 531 DMLAAHGLSPTVADARFAKPIDTALVEQLARNHAVLITIEEGSVGGFASFVMTHLARTGL 590

Query: 667 LDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
           LD  V++RP+ LPD +I+H +   Q   AGL    I  TAL  LG
Sbjct: 591 LDR-VRFRPMTLPDRFIDHNTQDAQYIEAGLDAAAITNTALEALG 634


>gi|349688169|ref|ZP_08899311.1| 1-deoxy-D-xylulose-5-phosphate synthase, partial [Gluconacetobacter
           oboediens 174Bp2]
          Length = 634

 Score =  555 bits (1430), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 298/627 (47%), Positives = 400/627 (63%), Gaps = 35/627 (5%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P LD V  P  +++L++++LKQLA E+RSE    VS T   L +SL  VELTVALH VF 
Sbjct: 20  PQLDRVRMPHDMRNLSVEQLKQLAEELRSETIDAVSTTGGHLGASLGVVELTVALHAVFD 79

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG Q Y HKILTGRR  I TLR+  G+SG+T RSESEYDPF A H   S+S
Sbjct: 80  TPDDRVIWDVGHQAYPHKILTGRRERIRTLRQPGGLSGFTRRSESEYDPFGAAHSSTSIS 139

Query: 200 AGLGMAVARDIKG------KRECIVTVISNGTTMAGQAYEAMSNAGYLD---SNMIVILN 250
           AGLGMAVA  ++       +   ++ VI +G+  AG AYEAM+NA +       +IV+LN
Sbjct: 140 AGLGMAVAHHLRAEEDPSYRERNVIAVIGDGSISAGMAYEAMNNASHCGPGAERLIVVLN 199

Query: 251 DSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVD 310
           D+  S+ P +         A+S+ LSR+ SS+ F  LRE+A  M KR+   +   A K D
Sbjct: 200 DNEMSIAPPV--------GAMSNYLSRLMSSRKFLSLRELAAKMAKRLPGRLERTAKKAD 251

Query: 311 EYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN- 369
           EYARG++   G TLFEELG YY+GPVDGH++  L+ +L+ +     +GPVL+HV+TE+  
Sbjct: 252 EYARGIM--TGGTLFEELGFYYVGPVDGHDMNQLVHILRNLRDAEDVGPVLLHVITEKGH 309

Query: 370 --RRAEDT-QKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHA 426
             + AE    K  A+ K      +    P G  S  Y   F + LV +A  D  IV + A
Sbjct: 310 GYKPAESAGDKYHAVSKFNVVTGEQKKGPSGPPS--YTSVFAKELVRQASTDDRIVTITA 367

Query: 427 GMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVV 486
            M     L  F   +P+R+FDVG+AEQHAVTF+AG+A  GL+PFC I S FLQRAYDQV+
Sbjct: 368 AMPSGTGLDKFARAYPDRFFDVGIAEQHAVTFAAGMATEGLRPFCAIYSTFLQRAYDQVM 427

Query: 487 NDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATV 546
           +DV  Q+LPVRF I  AGLVG+DG T  GAFDI ++ CLP M +MAPS+E EL+ M AT 
Sbjct: 428 HDVVLQKLPVRFAIDRAGLVGADGATHAGAFDIAYLGCLPGMTLMAPSNELELLHMTATS 487

Query: 547 ASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVE-----GKD---VALLGYGAM 598
            + D+ P+  RYPRG  +  +LP    I +EIG+G+++ E     G +   +A+L  G  
Sbjct: 488 IAFDEGPIGLRYPRGGGLGLELPAAGQI-LEIGRGRIVREMTRQSGPEQGGIAILSLGPR 546

Query: 599 VQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVS 658
           + + LKA  +L+  G+  TVADARF KP+D  LV +L +NH  LIT+EEGS+GGFGS+V 
Sbjct: 547 LADALKAADMLAAQGLSPTVADARFAKPIDTALVEQLARNHAVLITIEEGSVGGFGSYVM 606

Query: 659 HFIALDGLLDSGVKWRPIVLPDNYIEH 685
             +A  GLLD  V++RP+ LPD +I+H
Sbjct: 607 THLAKTGLLDR-VRFRPMTLPDRFIDH 632


>gi|349700981|ref|ZP_08902610.1| 1-deoxy-D-xylulose-5-phosphate synthase, partial [Gluconacetobacter
           europaeus LMG 18494]
          Length = 640

 Score =  555 bits (1429), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 302/636 (47%), Positives = 400/636 (62%), Gaps = 35/636 (5%)

Query: 97  KELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYAH 156
           ++LKQLA E+RSE    VS T   L +SL  VELTVALH VF  P D+++WDVG Q Y H
Sbjct: 1   EQLKQLAEELRSETIDAVSTTGGHLGASLGVVELTVALHAVFDTPDDRVIWDVGHQAYPH 60

Query: 157 KILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDIKG---- 212
           KILTGRR  I TLR+  G+SG+T RSESEYDPF A H   S+SAGLGMAVA  ++     
Sbjct: 61  KILTGRRERIRTLRQPGGLSGFTRRSESEYDPFGAAHSSTSISAGLGMAVAHHLRAEEDP 120

Query: 213 --KRECIVTVISNGTTMAGQAYEAMSNAGYLD---SNMIVILNDSRHSLHPKIEESPKTS 267
             +   ++ VI +G+  AG AYEAM+NA +       +IV+LND+  S+ P +       
Sbjct: 121 SYRERNVIAVIGDGSISAGMAYEAMNNASHCGPGAERLIVVLNDNEMSIAPPV------- 173

Query: 268 INALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEE 327
             A+S+ LSR+ SS+ F  LRE+A  M KR+   +   A K DEYARG++   G TLFEE
Sbjct: 174 -GAMSNYLSRLMSSRKFLSLRELAAKMAKRLPGRLERTAKKADEYARGIM--TGGTLFEE 230

Query: 328 LGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQ----KSEAIEK 383
           LG YYIGPVDGH++  L+ +L+ +     +GPVLVHV+TE+       +    K  A+ K
Sbjct: 231 LGFYYIGPVDGHDMNQLVHILRNLRDAEDVGPVLVHVITEKGHGYTPAESAGDKYHAVSK 290

Query: 384 QQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPE 443
                 +    P G  S  Y   F + LV +A  D  IV + A M     L  F + +P+
Sbjct: 291 FNVVTGEQKKGPSGPPS--YTSVFAKELVRQAATDDRIVTITAAMPSGTGLDKFAKAYPD 348

Query: 444 RYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSA 503
           R+FDVG+AEQHAVTF+AG+A  GL+PFC I S FLQRAYDQV++DV  Q+LPVRF I  A
Sbjct: 349 RFFDVGIAEQHAVTFAAGMATEGLRPFCAIYSTFLQRAYDQVMHDVVLQKLPVRFAIDRA 408

Query: 504 GLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYPRGAI 563
           GLVG+DG T  GAFDI ++ CLP M +MAPS+E EL+ M AT  + D+ P+  RYPRGA 
Sbjct: 409 GLVGADGATHAGAFDIAYLGCLPGMTLMAPSNELELLHMTATSIAFDEGPIGLRYPRGAG 468

Query: 564 VRTDLPGYRGIPIEIGKGKVLVE-----GKD---VALLGYGAMVQNCLKARALLSKLGID 615
           +  +LP    I +EIG+G+++ E     G +   +A+L  G  +++ LKA  +L+  G+ 
Sbjct: 469 LGLELPAAGQI-LEIGRGRIVREMTRQSGPEQGGIAILSLGPRLEDALKAADMLAAQGLS 527

Query: 616 VTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWRP 675
            TVADARF KP+D  LV +L +NH  LIT+EEGS+GGF S+V   +A  GLLD  V++RP
Sbjct: 528 PTVADARFAKPIDTALVEQLARNHAVLITIEEGSVGGFASYVMTHLAKTGLLDR-VRFRP 586

Query: 676 IVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
           + LPD +I+H +   Q   AGL    I  TAL  LG
Sbjct: 587 MTLPDRFIDHNTQAAQYHEAGLDAVAITNTALEALG 622


>gi|149914239|ref|ZP_01902770.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseobacter sp. AzwK-3b]
 gi|149811758|gb|EDM71591.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseobacter sp. AzwK-3b]
          Length = 642

 Score =  555 bits (1429), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 298/627 (47%), Positives = 399/627 (63%), Gaps = 16/627 (2%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           +K  TP+LD V  P  L+ +  ++L +LA E+RSE+ S VS+T   L SSL  VELTVA+
Sbjct: 4   EKPHTPLLDRVAGPSDLRQMPDRDLARLAQELRSEVISAVSETGGHLGSSLGVVELTVAI 63

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H VF  P+DK++WDVG Q Y HKILTGRR  I TLR+KDG+SG+T RSES YDPF A H 
Sbjct: 64  HAVFSTPMDKLIWDVGHQCYPHKILTGRRDRIRTLRQKDGLSGFTKRSESPYDPFGAAHS 123

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA LG AV RD+       + VI +G+  AG AYEAM+NAG+    + VILND+  
Sbjct: 124 STSISAALGFAVGRDMGQATGDAIAVIGDGSISAGMAYEAMNNAGHEGRRLFVILNDNEM 183

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+ P         + A+SS LSR+ +++   ++  +A+G    +   M E A +  +   
Sbjct: 184 SIAPP--------VGAMSSYLSRLYANEPLARMASLAEGFEAAMPAPMREGAKRARQLVT 235

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRR--- 371
           G+ G    TLFEELG  Y+GP+DGH+++ L+ VL+  A   + GPVL+H  T + +    
Sbjct: 236 GLTG--SGTLFEELGFEYVGPIDGHDMDQLLPVLR-AARTRATGPVLIHCCTVKGKGYAP 292

Query: 372 AEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMD 431
           AE +        + + A+ + +   G  + +Y   F ++L  EA +D DIV V A M   
Sbjct: 293 AETSSDKYHGVAKFDVATGTQTKSSGG-TPSYTSIFGQSLTEEAARDPDIVAVTAAMPSG 351

Query: 432 LSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQ 491
             L +   +FP R FDVG+AEQHAVTF+AG+A  GLKPFC I S FLQR YDQVV+DV  
Sbjct: 352 TGLDVMAARFPARVFDVGIAEQHAVTFAAGMAASGLKPFCAIYSTFLQRGYDQVVHDVAL 411

Query: 492 QRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDD 551
           Q LPVRF I  AGLVG+DG T  GAFDI ++S LP   VMA +DE EL  MVAT A+ D 
Sbjct: 412 QGLPVRFAIDRAGLVGADGATHAGAFDIGYLSSLPGFTVMAAADEAELKHMVATAAAHDA 471

Query: 552 RPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSK 611
            P+ FRYPRG+ +  ++P  RG  ++IGKG+VL EG DVA+L YGA +  C++A  LL +
Sbjct: 472 GPIAFRYPRGSGMGVEIP-ERGQVLKIGKGRVLREGTDVAILSYGAHLAECIEAVDLLER 530

Query: 612 LGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGV 671
            G+ VT+ADARF KPLD +LV +L + H  LITVE+G+ GGFGS V H +A +G  D G+
Sbjct: 531 EGLSVTLADARFAKPLDTELVMQLAEKHRALITVEQGAEGGFGSIVMHALAREGGFDRGL 590

Query: 672 KWRPIVLPDNYIEHASPTQQLALAGLT 698
             R + LPD +I+ ASP    A AG+T
Sbjct: 591 AMRNVCLPDRFIDQASPADMYADAGMT 617


>gi|99082760|ref|YP_614914.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ruegeria sp. TM1040]
 gi|118595619|sp|Q1GCG4.1|DXS_SILST RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|99039040|gb|ABF65652.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Ruegeria sp. TM1040]
          Length = 645

 Score =  555 bits (1429), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 300/648 (46%), Positives = 396/648 (61%), Gaps = 22/648 (3%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           D+  TP+LD + +P  LK L+  +L+Q+A E+R E  S VS T   L + L  VELTVAL
Sbjct: 3   DRPQTPLLDQIASPADLKRLSDAQLEQVAHELRQETISAVSVTGGHLGAGLGVVELTVAL 62

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H VF  P DK++WDV  Q Y HKILTGRR  I TLR KDG+SG+T RSES +DPF A H 
Sbjct: 63  HSVFDTPKDKVIWDVSHQCYPHKILTGRRDRIRTLRMKDGLSGFTKRSESAFDPFGAAHS 122

Query: 195 CNSVSAGLGMAVARDIKGKRE----CIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
             S+SA LG +VARD+ G  E      + VI +G   AG A+EAM+NAG+L   +IVILN
Sbjct: 123 STSISAALGFSVARDLGGVTEEGLGDAIAVIGDGAMSAGMAFEAMNNAGHLGKRLIVILN 182

Query: 251 DSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVD 310
           D+  S+ P         + ALSS LSR+ +   F  L+  AKG    +     E A +  
Sbjct: 183 DNEMSIAP--------PVGALSSYLSRLYTEAPFHDLKAAAKGAVSLLPEPFREGAKRAK 234

Query: 311 EYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN- 369
           +  +GM    G TLFE LG  YIGP+DGH+++ L+ VL+ V +  + GP+L+H VT++  
Sbjct: 235 DMLKGMA--MGGTLFESLGFSYIGPIDGHDMDQLLPVLRTVKARAA-GPILIHAVTKKGK 291

Query: 370 --RRAEDTQ-KSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHA 426
             R AE  + K  A  K      +    P  + + +Y   F + L   A +D  I  V A
Sbjct: 292 GYRPAEVARDKGHATAKFDMVTGEQKKAP--SNAPSYTSVFGKTLTDLAAQDSKICAVTA 349

Query: 427 GMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVV 486
            M     L L  E++P R FDVG+AEQH VTF+A LA GG+KPFC + S FLQR YDQVV
Sbjct: 350 AMPDGTGLNLMAERYPSRTFDVGIAEQHGVTFAAALAAGGMKPFCAMYSTFLQRGYDQVV 409

Query: 487 NDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATV 546
           +DV  QRLPVRF I  AGLVG+DG T  G+FDI FM+ LP M+VMA +DE EL  MVAT 
Sbjct: 410 HDVAIQRLPVRFAIDRAGLVGADGATHAGSFDIAFMANLPGMVVMAAADEAELKHMVATA 469

Query: 547 ASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
           A+ D  P+ FRYPRG     ++P    + +EIGKG+++ EG  VALL +G  +    KA 
Sbjct: 470 AAYDAGPIAFRYPRGEGEGVEMPEQPEV-LEIGKGRIIEEGSRVALLSFGTRLGEVRKAA 528

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGL 666
             L+  GI  TVADARF KPLD  ++  L + H  LIT+EEG++GGFGSHV+  ++ + +
Sbjct: 529 EALAARGITPTVADARFAKPLDRDMILSLAEKHEALITIEEGAVGGFGSHVAQLLSEEAV 588

Query: 667 LDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTR 714
            D+G+K+R +VLPD +I+ ASP      A +   HI A  L +LG  R
Sbjct: 589 FDTGLKFRSMVLPDTFIDQASPKDMYDSAAMNAEHIEAKVLDVLGVAR 636


>gi|344923787|ref|ZP_08777248.1| 1-deoxy-D-xylulose-5-phosphate synthase [Candidatus Odyssella
           thessalonicensis L13]
          Length = 637

 Score =  555 bits (1429), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 301/630 (47%), Positives = 401/630 (63%), Gaps = 21/630 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V  P  +K+    +LKQLA E+R E   IVSKT   L +SL  VELTVALH+VF
Sbjct: 4   TPLLDQVNFPQDIKNFDGHQLKQLAEEVRRETIDIVSKTGGHLGASLGVVELTVALHYVF 63

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P DK++WDVG Q+Y HKILTGRR+ +  LR+K G SG+T RSES YDPF A H   S+
Sbjct: 64  DTPNDKLIWDVGHQSYPHKILTGRRATMSKLRQKGGPSGFTKRSESIYDPFGAAHAGTSI 123

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LG AVA ++  K    + VI +G+  +G AYEAM+NAG L S ++VILND+  S+ P
Sbjct: 124 SAALGFAVASEMNKKHHHSIAVIGDGSMSSGMAYEAMNNAGALKSRLVVILNDNDMSIAP 183

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                    + A+S   SR+ SS+ ++ LR +AK +   + + +   A +V+EYARG++ 
Sbjct: 184 --------PVGAMSHYFSRLISSRPYQSLRSMAKEVASHLPKPLETAARRVEEYARGIVA 235

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G T FEE+G +Y+GP+DGH+++ LI VL+ +      GPVL+H+VT++ R       +
Sbjct: 236 --GGTWFEEMGFFYVGPIDGHDLDHLIPVLENIRDRKEDGPVLIHIVTQKGR---GYAPA 290

Query: 379 EAIEKQQEGASDSNSLPFGNYSRT------YDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
           EA   +  G    + +  G   +T      Y   F E L   A +D  IV + A M    
Sbjct: 291 EAAADKYHGVVKFD-VATGQQQKTEVSSPSYTKVFAETLTELARQDDKIVAITAAMPTGT 349

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            L LF  +FP R FDVG+AEQHAVTF+AGLAC GLKPF  I S FLQR +DQVV+DV  Q
Sbjct: 350 GLDLFAREFPGRCFDVGIAEQHAVTFAAGLACDGLKPFTAIYSTFLQRGFDQVVHDVMLQ 409

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
            LPVRF +  AG VG+DG T  G++D+ F+ CLP MI+MAPSDE EL   V T  +I+D 
Sbjct: 410 NLPVRFALDRAGFVGADGATHAGSYDLAFLGCLPQMIIMAPSDELELKHAVTTAHAIEDG 469

Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
           P  FRYPRG  V  DL    G  +EIGKG+++ EG  +A+L  G  +Q  LKA ALL++L
Sbjct: 470 PCAFRYPRGNGVGLDLR-QPGKILEIGKGRIIQEGNQIAILSLGCRLQESLKAAALLAEL 528

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 672
           G+ VTVADARF KP+D+ LV +L Q+H  L+TVE GSIGGF + V+  +  + LLD G+K
Sbjct: 529 GLSVTVADARFAKPVDMNLVIQLAQHHEVLLTVEAGSIGGFATQVTDVLVQNWLLDKGLK 588

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHI 702
           +R + +PD   +H +P  Q   AGLT HHI
Sbjct: 589 FRTLYMPDRLFDHDTPNSQYEEAGLTAHHI 618


>gi|254466411|ref|ZP_05079822.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacterales bacterium
           Y4I]
 gi|206687319|gb|EDZ47801.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacterales bacterium
           Y4I]
          Length = 642

 Score =  554 bits (1428), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 303/651 (46%), Positives = 401/651 (61%), Gaps = 34/651 (5%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           D+  TP+LD +  P  LK LT  +L Q+A E+R E  S VS T   L + L  VELT AL
Sbjct: 3   DRPNTPLLDQITRPADLKGLTDAQLVQVAHELRQETISAVSVTGGHLGAGLGVVELTTAL 62

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H VF  P DK++WDV  Q Y HKILTGRR  I TLR KDG+SG+T RSES YDPF A H 
Sbjct: 63  HAVFDTPRDKVIWDVSHQCYPHKILTGRRDRIRTLRMKDGLSGFTKRSESPYDPFGAAHS 122

Query: 195 CNSVSAGLGMAVARDIKG----KRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
             S+SA LG AVARD+ G         + VI +G+  AG A+EAM+NAG+L   + VILN
Sbjct: 123 STSISAALGFAVARDLGGVIPEGNGDAIAVIGDGSMSAGMAFEAMNNAGHLGKRLFVILN 182

Query: 251 DSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVD 310
           D+  S+ P         + ALSS LSR+ + + F++L+  AKG    +     E A +  
Sbjct: 183 DNEMSIAP--------PVGALSSYLSRLYAGEPFQELKAAAKGAVSLLPEPFREGAKRAK 234

Query: 311 EYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR 370
           +  +GM    G TLFE LG  Y+GP+DGH++  L+ VL+ V +  + GP+L+HV+T++ +
Sbjct: 235 DMLKGMA--VGGTLFEALGFSYLGPIDGHDLNQLLPVLRTVKARAT-GPILIHVLTKKGK 291

Query: 371 ------RAED----TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKD 420
                 RA D    T K + +  +Q+ A  +        + +Y   F   LV  A KD  
Sbjct: 292 GYGPAERARDKGHATAKFDMVTGEQKKAPSN--------APSYTSVFGNELVKLAAKDDK 343

Query: 421 IVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQR 480
           I  V A M     L L  E++P R FDVG+AEQH VTF+A LA GG+KPFC + S FLQR
Sbjct: 344 ICAVTAAMPDGTGLSLMAERYPSRCFDVGIAEQHGVTFAAALAAGGMKPFCAMYSTFLQR 403

Query: 481 AYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELV 540
            YDQVV+DV  QRLPVRF I  AGLVG+DG T  G+FDI FM+ LP M+VMA +DE ELV
Sbjct: 404 GYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGSFDIAFMANLPGMVVMAAADEAELV 463

Query: 541 DMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQ 600
            MVAT A+ +D P+ FRYPRG     ++P    + +EIGKG+++  GK VALL +G  + 
Sbjct: 464 HMVATAAAHNDGPIAFRYPRGEGEGVEMPETPEV-LEIGKGRMIQAGKRVALLSFGTRLG 522

Query: 601 NCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHF 660
              KA   L+  GI  T+ADARF KPLD  L+ +L  +H  LIT+EEG++GGFGSHV+  
Sbjct: 523 EVKKAAEALAAKGIKPTIADARFAKPLDRDLILQLAADHEALITIEEGAVGGFGSHVAQL 582

Query: 661 IALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
           +A +G+ DSG+K+R +VLPD +I+ ASP     +A +    I A  L +LG
Sbjct: 583 LAEEGVFDSGLKYRSMVLPDTFIDQASPADMYEVAAMNAPQIEAKVLDVLG 633


>gi|16226685|gb|AAL16232.1|AF428463_1 AT4g15560/dl3821w [Arabidopsis thaliana]
          Length = 428

 Score =  554 bits (1428), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 274/432 (63%), Positives = 329/432 (76%), Gaps = 11/432 (2%)

Query: 294 MTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVAS 353
           MTK+IG  MH+ AAKVDEYARGMI   GS+LFEELGLYYIGPVDGHNI+DL+++L+EV S
Sbjct: 1   MTKQIGGPMHQLAAKVDEYARGMISGTGSSLFEELGLYYIGPVDGHNIDDLVAILKEVKS 60

Query: 354 LGSMGPVLVHVVTEENR------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCF 407
             + GPVL+HVVTE+ R      RA+D  K   + K     +        N +++Y   F
Sbjct: 61  TRTTGPVLIHVVTEKGRGYPYAERADD--KYHGVVKFDP--ATGRQFKTTNKTQSYTTYF 116

Query: 408 IEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGL 467
            EALV EAE DKD+V +HA M     L LFQ +FP R FDVG+AEQHAVTF+AGLAC GL
Sbjct: 117 AEALVAEAEVDKDVVAIHAAMGGGTGLNLFQRRFPTRCFDVGIAEQHAVTFAAGLACEGL 176

Query: 468 KPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPN 527
           KPFC I S+F+QRAYDQVV+DVD Q+LPVRF +  AGLVG+DGPT CGAFD+TFM+CLPN
Sbjct: 177 KPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMACLPN 236

Query: 528 MIVMAPSDEDELVDMVATVASIDDRPVCFRYPRGAIVRTDL-PGYRGIPIEIGKGKVLVE 586
           MIVMAPSDE +L +MVAT  +IDDRP CFRYPRG  +   L PG +G+PIEIGKG++L E
Sbjct: 237 MIVMAPSDEADLFNMVATAVAIDDRPSCFRYPRGNGIGVALPPGNKGVPIEIGKGRILKE 296

Query: 587 GKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVE 646
           G+ VALLGYG+ VQ+CL A  +L + G++VTVADARFCKPLD  L+R L ++H  LITVE
Sbjct: 297 GERVALLGYGSAVQSCLGAAVMLEERGLNVTVADARFCKPLDRALIRSLAKSHEVLITVE 356

Query: 647 EGSIGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATA 706
           EGSIGGFGSHV  F+ALDGLLD  +KWRP+VLPD YI+H +P  QLA AGL   HIAATA
Sbjct: 357 EGSIGGFGSHVVQFLALDGLLDGKLKWRPMVLPDRYIDHGAPADQLAEAGLMPSHIAATA 416

Query: 707 LSLLGRTREALL 718
           L+L+G  REAL 
Sbjct: 417 LNLIGAPREALF 428


>gi|220926882|ref|YP_002502184.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacterium nodulans
           ORS 2060]
 gi|219951489|gb|ACL61881.1| deoxyxylulose-5-phosphate synthase [Methylobacterium nodulans ORS
           2060]
          Length = 654

 Score =  553 bits (1425), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 310/659 (47%), Positives = 408/659 (61%), Gaps = 42/659 (6%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+LD V +P  L++L   +L+QLA E+R+E    VS T   L + L  VELTVALH+VF 
Sbjct: 7   PLLDRVRDPADLRALPESDLRQLADELRAETIDAVSVTGGHLGAGLGVVELTVALHYVFT 66

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG Q Y HKILTGRR  I TLR+  G+SG+T R+ES YDPF A H   S+S
Sbjct: 67  TPDDRLIWDVGHQAYPHKILTGRRDRIRTLRQGGGLSGFTKRAESPYDPFGAAHSSTSIS 126

Query: 200 AGLGMAVARDIKG----------KRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVIL 249
           AGLGMA+ARD+             R  +V VI +G+  AG AYEAM+NAG L S +IVIL
Sbjct: 127 AGLGMAIARDLAEAAARARGETPARRNVVAVIGDGSISAGMAYEAMNNAGALRSRLIVIL 186

Query: 250 NDSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKV 309
           ND+  S+ P +         A+S+ L+R+ S  ++R LR+ AK   + + + +++ AA+ 
Sbjct: 187 NDNDMSIAPPV--------GAMSAYLARLVSGDTYRSLRDTAKQFGRLLPKALYDTAARA 238

Query: 310 DEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN 369
           +EYARG++   G T+FEELG +Y+GP+DGHN++ L+ VL+ V      GPVLVHVVT++ 
Sbjct: 239 EEYARGILA-GGGTMFEELGFHYVGPIDGHNLDHLLPVLKNVRD-APEGPVLVHVVTQKG 296

Query: 370 R----------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDK 419
           +          R     K + +  QQ  A  +        + +Y   F E+LV  A  D+
Sbjct: 297 KGYAPAEAAADRGHAVVKFDVLSGQQVKAKPN--------APSYTRVFGESLVKAAAADE 348

Query: 420 DIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQ 479
            +V + A M     + +F +  PER FDVG+AEQHAVTF+AGLA  G +PFC I S FLQ
Sbjct: 349 TVVAITAAMPSGTGVDIFAKAHPERTFDVGIAEQHAVTFAAGLAAEGFRPFCAIYSTFLQ 408

Query: 480 RAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDEL 539
           RAYDQVV+DV  Q LPVRF +  AGLVG+DG T  GAFD+ ++ CLPN+ VMA +DE EL
Sbjct: 409 RAYDQVVHDVAIQNLPVRFALDRAGLVGADGATHAGAFDLAYLCCLPNLTVMAAADEAEL 468

Query: 540 VDMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVE--GKDVALLGYGA 597
           V MVAT  + D  P+  RYPRG  V  DLP  RG  + IGKG+VL    G  VALL  G 
Sbjct: 469 VHMVATAHAHDAGPIALRYPRGEGVGVDLP-ERGEVLAIGKGRVLRRPPGARVALLSLGT 527

Query: 598 MVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHV 657
            +   LKA   L + GI VTVADARF KPLD  L+ +L  +H  L+T+EEGS GGFG+ V
Sbjct: 528 RLAEALKAADRLEESGIGVTVADARFAKPLDEALILDLAGSHEVLVTLEEGSTGGFGAMV 587

Query: 658 SHFIALDGLLDSG-VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTRE 715
            H +A  G LD+G V+ R + LPD Y +H SP +  A AGL    I  T   LL   R+
Sbjct: 588 LHLLAARGALDAGTVRVRTLTLPDVYQDHDSPERMYAQAGLDAPAIVRTVTDLLPEERK 646


>gi|114329068|ref|YP_746225.1| 1-deoxy-D-xylulose-5-phosphate synthase [Granulibacter bethesdensis
           CGDNIH1]
 gi|114317242|gb|ABI63302.1| 1-deoxy-D-xylulose 5-phosphate synthase [Granulibacter bethesdensis
           CGDNIH1]
          Length = 669

 Score =  553 bits (1424), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 303/660 (45%), Positives = 407/660 (61%), Gaps = 41/660 (6%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP LD V  P  L++++ ++L+ +A E+R+E    VS T   L ++L  +ELTVA+H VF
Sbjct: 12  TPTLDRVRYPSDLRNMSSEQLRAVADELRAETVDAVSVTGGHLGAALGVIELTVAIHAVF 71

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR  I TLR   G+SG+T RSESEYDPF AGH   S+
Sbjct: 72  DTPSDRLIWDVGHQAYPHKILTGRRDRIRTLRMGGGLSGFTKRSESEYDPFGAGHSSTSI 131

Query: 199 SAGLGMAVARDIK-------GKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILND 251
           SAGLGMAVARD++          E ++ VI +G   AG  YEAM+NAG L S ++VILND
Sbjct: 132 SAGLGMAVARDLRRAAGEVGAGPEHVIAVIGDGAMSAGMVYEAMNNAGSLKSRLVVILND 191

Query: 252 SRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDE 311
           +  S+ P +         A+S+ LSR+ SS+SF  LR++A  M +   RG+   A + +E
Sbjct: 192 NDMSIAPPV--------GAMSAYLSRLLSSRSFLNLRDLAGKMARHFPRGIERTARRAEE 243

Query: 312 YARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRR 371
           YARG++   G TLFEELG YY+GP+DGHN++ L+ VL+ V      GP+LVH +T   R+
Sbjct: 244 YARGIL--TGGTLFEELGFYYVGPIDGHNLDHLLPVLRNVRDAEETGPILVHAIT---RK 298

Query: 372 AEDTQKSEAIEKQQEGASDSN----------SLPFGNYSR-TYDDCFIEALVMEAEKDKD 420
                 +EA   +    S  N           +P    +  TY   F EAL+  AE +  
Sbjct: 299 GHGYAPAEASADKYHAVSRFNVVTGEQIKPAPVPGAKPAPPTYTKVFAEALIAAAEDNPR 358

Query: 421 IVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQR 480
           +V ++A M     L  F+++FP+R FDVG+AEQHAVTF+AGLA  G+ PFC + S FLQR
Sbjct: 359 VVAINAAMPSGTGLDAFEKRFPDRCFDVGIAEQHAVTFAAGLAVEGMVPFCALYSTFLQR 418

Query: 481 AYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELV 540
            YDQ+V+DV  Q LPVRF I  AGLVG+DG T  G+FD+ ++ CLP M++M+PSDE ELV
Sbjct: 419 GYDQLVHDVAIQHLPVRFAIDRAGLVGADGATHAGSFDMAYLGCLPGMMIMSPSDEAELV 478

Query: 541 DMVATVASIDDRPVCFRYPRGAIVRTDLP-----GYRGIPIEIGKGKVLVEGKD-VALLG 594
             VATVA+ D  P   RYPRG  V   LP       RG  + IG+G+++ EG+  +A+L 
Sbjct: 479 HAVATVAAYDSGPSAVRYPRGEGVGVALPRDEKGRLRGDVLPIGRGRIVREGRSGIAILS 538

Query: 595 YGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFG 654
            G  +Q+ L A   L+  G+ VTVAD RF KPLD  LV  L + +  L+ VEEGSIGG+ 
Sbjct: 539 IGTRLQDALLAADDLAAHGLTVTVADGRFVKPLDTALVERLARENDVLVVVEEGSIGGYA 598

Query: 655 SHVSHFIALDGLLDS----GVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
           SHV   +A  GLLD+     +K R ++LPD YI+H +   Q+  AGL    I  T L LL
Sbjct: 599 SHVMQHLAQAGLLDARDGHALKLRSMILPDRYIDHDTQPNQIRQAGLDHQAIRDTVLKLL 658


>gi|384921844|ref|ZP_10021805.1| 1-deoxy-D-xylulose-5-phosphate synthase [Citreicella sp. 357]
 gi|384464259|gb|EIE48843.1| 1-deoxy-D-xylulose-5-phosphate synthase [Citreicella sp. 357]
          Length = 641

 Score =  553 bits (1424), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 302/641 (47%), Positives = 395/641 (61%), Gaps = 22/641 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V  P  LK ++  EL+QLA E+R+E  + VS+T   L + L  VELTVALH VF
Sbjct: 7   TPLLDRVSAPADLKRMSDAELEQLAHELRAETIAAVSQTGGHLGAGLGVVELTVALHAVF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P DK++WDV  Q Y HKILTGRR  I T+R++ G+SG+T RSES YD F AGH   S+
Sbjct: 67  DTPRDKLIWDVSHQAYPHKILTGRRDRIRTIRQQGGLSGFTKRSESPYDCFGAGHSSTSI 126

Query: 199 SAGLGMAVARDIKGKREC----IVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
           SA LG AVARD+ G  +      + VI +G   AG A+EAM+NAG+L   +IVILND+  
Sbjct: 127 SAALGFAVARDLGGTTDTGAGDAIAVIGDGAMSAGMAFEAMNNAGHLGKRLIVILNDN-- 184

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
                 E S      A+SS LSR+ +   F+ L+  AKG    +   + E A +  E  +
Sbjct: 185 ------EMSIAAPTGAMSSYLSRLYAEAPFQDLKVAAKGAVALLPPPLREGAKRAKEMIK 238

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRR--- 371
           GM    G TLFEELG  Y+GP+DGH++  L+ VL+ V    + GP+L+H +T++ +    
Sbjct: 239 GMA--VGGTLFEELGFSYLGPIDGHDLHQLLPVLRTVRDRAT-GPILIHALTKKGKGYAP 295

Query: 372 AEDT-QKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
           AE +  +  A  K      +    P  + + +Y   F + L   AE D  I  V A M  
Sbjct: 296 AEGSADRGHARAKFDVSTGEQKKAP--SNAPSYTSVFAKELTRLAEVDPRICAVTAAMPD 353

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L L  E+FP R FDVG+AEQH VTF+AGLA GGL+PFC + S FLQR YDQVV+DV 
Sbjct: 354 GTGLDLMAERFPARVFDVGIAEQHGVTFAAGLAAGGLRPFCAMYSTFLQRGYDQVVHDVA 413

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            QRLPVRF I  AGLVG+DG T  GA+DI FM+ LP M+VMA +DE EL  MVAT A+ D
Sbjct: 414 IQRLPVRFAIDRAGLVGADGATHAGAYDIAFMTNLPGMVVMAAADEAELKHMVATAAAYD 473

Query: 551 DRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLS 610
             P+ FRYPRG     D+P  +G  +EIG+G+++ +G  VALL +G  +   L A   L 
Sbjct: 474 SGPIAFRYPRGEGRGVDMP-EQGEILEIGRGRLIRQGARVALLSFGTRLGETLAAAERLD 532

Query: 611 KLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSG 670
             GI  TVADARF KPLD  L+  L   H  L+T+EEG+IGGFGSHV+  +A +G+ D G
Sbjct: 533 ARGIAATVADARFAKPLDRDLILRLATTHEALLTIEEGAIGGFGSHVAQLLADEGIFDHG 592

Query: 671 VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
           +K+R +VLPD++I+HASP    A AGL    I    L+ LG
Sbjct: 593 LKFRSMVLPDSFIDHASPDAMYAAAGLDAARIEEKVLTTLG 633


>gi|220926555|ref|YP_002501857.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacterium nodulans
           ORS 2060]
 gi|219951162|gb|ACL61554.1| deoxyxylulose-5-phosphate synthase [Methylobacterium nodulans ORS
           2060]
          Length = 665

 Score =  552 bits (1423), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 309/654 (47%), Positives = 406/654 (62%), Gaps = 42/654 (6%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+LD V +P  L++L   +L+QLA E+R+E    VS T   L + L  VELTVALH+VF 
Sbjct: 7   PLLDRVRDPADLRALPESDLRQLADELRAETIDAVSVTGGHLGAGLGVVELTVALHYVFT 66

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG Q Y HKILTGRR  I TLR+  G+SG+T R+ES YDPF A H   S+S
Sbjct: 67  TPDDRLIWDVGHQAYPHKILTGRRDRIRTLRQGGGLSGFTKRAESPYDPFGAAHSSTSIS 126

Query: 200 AGLGMAVARDIKG----------KRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVIL 249
           AGLGMA+ARD+             R  +V VI +G+  AG AYEAM+NAG L S +IVIL
Sbjct: 127 AGLGMAIARDLAEAAARARGETPARRNVVAVIGDGSISAGMAYEAMNNAGALRSRLIVIL 186

Query: 250 NDSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKV 309
           ND+  S+ P +         A+S+ L+R+ S  ++R LR+ AK   + + + +++ AA+ 
Sbjct: 187 NDNDMSIAPPV--------GAMSAYLARLVSGDTYRSLRDTAKQFGRLLPKALYDTAARA 238

Query: 310 DEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN 369
           +EYARG++   G T+FEELG +Y+GP+DGHN++ L+ VL+ V      GPVLVHVVT++ 
Sbjct: 239 EEYARGILA-GGGTMFEELGFHYVGPIDGHNLDHLLPVLKNVRD-APEGPVLVHVVTQKG 296

Query: 370 R----------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDK 419
           +          R     K + +  QQ  A  +        + +Y   F E+LV  A  D+
Sbjct: 297 KGYAPAEAAADRGHAVVKFDVLSGQQVKAKPN--------APSYTRVFGESLVKAAAADE 348

Query: 420 DIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQ 479
            +V + A M     + +F +  PER FDVG+AEQHAVTF+AGLA  G +PFC I S FLQ
Sbjct: 349 TVVAITAAMPSGTGVDIFAKAHPERTFDVGIAEQHAVTFAAGLAAEGFRPFCAIYSTFLQ 408

Query: 480 RAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDEL 539
           RAYDQVV+DV  Q LPVRF +  AGLVG+DG T  GAFD+ ++ CLPN+ VMA +DE EL
Sbjct: 409 RAYDQVVHDVAIQNLPVRFALDRAGLVGADGATHAGAFDLAYLCCLPNLTVMAAADEAEL 468

Query: 540 VDMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVE--GKDVALLGYGA 597
           V MVAT  + D  P+  RYPRG  V  DLP  RG  + IGKG+VL    G  VALL  G 
Sbjct: 469 VHMVATAHAHDAGPIALRYPRGEGVGVDLP-ERGEVLAIGKGRVLRRPPGARVALLSLGT 527

Query: 598 MVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHV 657
            +   LKA   L + GI VTVADARF KPLD  L+ +L  +H  L+T+EEGS GGFG+ V
Sbjct: 528 RLAEALKAADRLEESGIGVTVADARFAKPLDEALILDLAGSHEVLVTLEEGSTGGFGAMV 587

Query: 658 SHFIALDGLLDSG-VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
            H +A  G LD+G V+ R + LPD Y +H SP +  A AGL    I  T   LL
Sbjct: 588 LHLLAARGALDAGTVRVRTLTLPDVYQDHDSPERMYAQAGLDAPAIVRTVTDLL 641


>gi|170744395|ref|YP_001773050.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacterium sp. 4-46]
 gi|168198669|gb|ACA20616.1| deoxyxylulose-5-phosphate synthase [Methylobacterium sp. 4-46]
          Length = 654

 Score =  552 bits (1423), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 302/641 (47%), Positives = 405/641 (63%), Gaps = 42/641 (6%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+LD V +P  L++L   +L QLA E+R+E    VS T   L + L  VELTVALH+VFH
Sbjct: 7   PLLDRVRDPSELRALPESDLAQLAAELRAETIDAVSVTGGHLGAGLGVVELTVALHYVFH 66

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG Q Y HKILTGRR  I TLR+  G+SG+T R+ES YDPF A H   S+S
Sbjct: 67  TPDDRLIWDVGHQAYPHKILTGRRDRIRTLRQGGGLSGFTKRAESPYDPFGAAHSSTSIS 126

Query: 200 AGLGMAVARDIKG----------KRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVIL 249
           AGLGMAVARD+            +R  +V VI +G+  AG AYEAM+NAG L S ++VIL
Sbjct: 127 AGLGMAVARDLAEAAARARGETPERRNVVAVIGDGSISAGMAYEAMNNAGALRSRLVVIL 186

Query: 250 NDSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKV 309
           ND+  S+ P +         A+S+ L+R+ S  ++R LR+ A+   + + + +++ A + 
Sbjct: 187 NDNDMSIAPPV--------GAMSAYLARLVSGDTYRSLRDTARQFGRLLPKALYDTAVRA 238

Query: 310 DEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN 369
           +EYARG++   G T+FEELG +Y+GP+DGHN++ L+ +L+ V      GPVLVHVVT++ 
Sbjct: 239 EEYARGILA-GGGTMFEELGFHYVGPIDGHNLDHLLPILKNVRD-APEGPVLVHVVTQKG 296

Query: 370 R----------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDK 419
           +          R     K + +  QQ  A  +        + TY   F E+LV  A+ D 
Sbjct: 297 KGYAPAEAAADRGHAVVKFDVVSGQQVKAKAN--------APTYTRVFGESLVKAADADD 348

Query: 420 DIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQ 479
            +V + A M     + LF +  P R FDVG+AEQHAVTF+AGLA  G +PFC I S FLQ
Sbjct: 349 KVVAITAAMPSGTGVDLFAKAHPGRTFDVGIAEQHAVTFAAGLAAEGYRPFCAIYSTFLQ 408

Query: 480 RAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDEL 539
           RAYDQVV+DV  Q LPVRF +  AGLVG+DG T  GAFD+ ++ CLPNM+VMA +DE EL
Sbjct: 409 RAYDQVVHDVALQNLPVRFALDRAGLVGADGATHAGAFDLAYLCCLPNMVVMAAADEAEL 468

Query: 540 VDMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVL--VEGKDVALLGYGA 597
           V MVAT  + D  P+ FRYPRG  V  DLP  +G  + +G+G+V+   EG  VAL+  G 
Sbjct: 469 VHMVATAHAHDAGPIAFRYPRGEGVGVDLP-EKGEVLALGRGRVIRRPEGARVALVSLGT 527

Query: 598 MVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHV 657
            +   LKA   L + GI VTVADARF KPLD  L+ +L  +H  L+TVEEGS GGFG+ V
Sbjct: 528 RLAEALKAAEQLEERGIGVTVADARFAKPLDEGLLLDLAGSHEVLVTVEEGSTGGFGAMV 587

Query: 658 SHFIALDGLLDSG-VKWRPIVLPDNYIEHASPTQQLALAGL 697
            H +A  G LD+G V+ R + LPD+Y +H +P +  A AGL
Sbjct: 588 LHLLAGRGALDAGTVRVRTLTLPDSYQDHDTPERMYAQAGL 628


>gi|84514695|ref|ZP_01002059.1| 1-deoxy-D-xylulose-5-phosphate synthase [Loktanella vestfoldensis
           SKA53]
 gi|84511746|gb|EAQ08199.1| 1-deoxy-D-xylulose-5-phosphate synthase [Loktanella vestfoldensis
           SKA53]
          Length = 637

 Score =  552 bits (1422), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 295/650 (45%), Positives = 403/650 (62%), Gaps = 30/650 (4%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           D+  TP+LD V+ P  +KSL+  +L++LA E+R+E  + VS T   L + L  VE+TVAL
Sbjct: 3   DQPNTPLLDKVQTPADMKSLSDAQLRKLADELRAETIAAVSVTGGHLGAGLGVVEMTVAL 62

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H VF AP DKI+WDV  Q+Y HKILTGRR  I T+R + G+SG+T RSES YDPF A H 
Sbjct: 63  HAVFDAPKDKIIWDVSHQSYPHKILTGRRDRIRTIRTEGGLSGFTKRSESPYDPFGAAHS 122

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA LG AVARD+ G     + +I +G   AG AYEAM+NAG+L   +IVILND+  
Sbjct: 123 STSISAALGFAVARDLGGDPGDAIAIIGDGAISAGMAYEAMNNAGHLGKRLIVILNDNEM 182

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+ P         + A+SS LS++ +   F++ +  AKG    +     E A +  +  +
Sbjct: 183 SIAPP--------VGAMSSYLSQLYAGAPFQEFKAAAKGAVSLLPEPFREGAKRAKDVLK 234

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---- 370
            M    G TLFE+LG  Y+GP+DGH+++ L+SVL+ V +    GP+L+H +T++ +    
Sbjct: 235 HMT--VGGTLFEQLGFSYVGPIDGHDMDQLLSVLRTVKARAD-GPILIHAITKKGKGYAP 291

Query: 371 ------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVV 424
                 +   T K + +  +Q  A  +        + +Y   F E+L+  A  D  I  V
Sbjct: 292 AESASDKGHATAKFDLVTGKQAKAPSN--------APSYTSVFAESLLKHAAADPRICAV 343

Query: 425 HAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQ 484
            A M     L  F E++  R FDVG+AEQHAVTFSAGLA GG++PFC I S FLQR YDQ
Sbjct: 344 TAAMPDGTGLSKFMERYASRCFDVGIAEQHAVTFSAGLAAGGMRPFCAIYSTFLQRGYDQ 403

Query: 485 VVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVA 544
           +V+DV  QRLPVRF I  AGLVG+DG T  G+FD+ F++ LP  +VMA +DE ELV MVA
Sbjct: 404 IVHDVAIQRLPVRFAIDRAGLVGADGATHAGSFDVAFLANLPGFVVMAAADEAELVRMVA 463

Query: 545 TVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLK 604
           T A+ D+ P+ FR+PRG  V  ++P     P+EIGKG+++ EG  VA+L +G  +   +K
Sbjct: 464 TAAAYDEGPIAFRFPRGEGVGVEIP-QDATPLEIGKGRMIREGAQVAILSFGTRLSEVMK 522

Query: 605 ARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALD 664
           A   L   GI  TVADARF KPLD  L+ +L   H  LITVEEG++GGFGSHV   +A +
Sbjct: 523 ACETLEAKGIKPTVADARFAKPLDRDLILQLAAGHDALITVEEGAVGGFGSHVGQLLADE 582

Query: 665 GLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTR 714
           G+ D G+++R +VLPD +I+ ASP     +AG+   HI A  L  LG  R
Sbjct: 583 GVFDHGLRFRSMVLPDTFIDQASPKAMYDVAGMNAAHIEAKVLEALGIAR 632


>gi|94496312|ref|ZP_01302889.1| deoxyxylulose-5-phosphate synthase [Sphingomonas sp. SKA58]
 gi|94424058|gb|EAT09082.1| deoxyxylulose-5-phosphate synthase [Sphingomonas sp. SKA58]
          Length = 639

 Score =  551 bits (1421), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 296/646 (45%), Positives = 402/646 (62%), Gaps = 30/646 (4%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           D+  TP+LD V  P  L+ L  ++L+QLA E+R+E  + V  T   L S L  VELT A+
Sbjct: 3   DRPETPLLDQVVWPADLRKLQPEQLRQLADELRAETIAAVGVTGGHLGSGLGVVELTAAI 62

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H+VF  P DK++WDVG Q Y HKILTGRR  I TLR+  G+SG+T R+ES+YDPF A H 
Sbjct: 63  HYVFDTPDDKLIWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTRRAESDYDPFGAAHS 122

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA LG A+A  ++ K    + VI +G   AG AYEAM+NA    + ++VILND+  
Sbjct: 123 STSISAALGFAIANKMQDKPGKAIAVIGDGAMSAGMAYEAMNNARDAGNRLVVILNDNDM 182

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+ P         +  LS+ L+R+ SS+ F  LR++A+ + +++ R +H  A K DE+AR
Sbjct: 183 SIAP--------PVGGLSAYLARLVSSREFLGLRDLARKLARKLPRPLHNAARKTDEFAR 234

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---- 370
           GM    G TLFEELG YY+GP+DGHN++ LI VL+ V    + GP LVHVVT++ +    
Sbjct: 235 GMA--MGGTLFEELGFYYVGPIDGHNLDQLIPVLENVRD-AAQGPCLVHVVTQKGKGYAP 291

Query: 371 ------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVV 424
                 +    QK + I   Q+ A      P G  S  Y + F +AL+ EA++D  +  +
Sbjct: 292 AEAAADKYHGVQKFDVITGTQDKA------PPGPPS--YTNVFAKALIAEAQRDPAVCAI 343

Query: 425 HAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQ 484
            A M     L  FQ  FP+R FDVG+AEQHAVTF+AGLA  G++PFC I S FLQRAYDQ
Sbjct: 344 TAAMPSGTGLDKFQAAFPDRIFDVGIAEQHAVTFAAGLAAQGMRPFCAIYSTFLQRAYDQ 403

Query: 485 VVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVA 544
           VV+DV  Q LPVRF I  AGLVG+DG T  G+FD+T+++ LPNM+VMA +DE ELV MV 
Sbjct: 404 VVHDVAIQNLPVRFAIDRAGLVGADGSTHAGSFDVTYLATLPNMVVMAAADEAELVHMVR 463

Query: 545 TVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLK 604
           T A  D  P+  RYPRG      LP  +   +EIGKG+++ EG+ VA+L  G  ++  +K
Sbjct: 464 TCAIHDSGPIAVRYPRGNGTGIPLP-EQPQALEIGKGRIVREGRQVAILSLGTRLEEAMK 522

Query: 605 ARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALD 664
           A   L   G+  TVAD RF KPLD  L+R+L   H   +T+EEG++GG G+HV    +  
Sbjct: 523 AADALEAKGLSTTVADLRFAKPLDEALIRKLLTTHDVAVTIEEGAVGGLGAHVLTLASDL 582

Query: 665 GLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
           GL+D+G+K R + LPD + +   P +Q A+A L    I  T L+ L
Sbjct: 583 GLIDNGLKLRTLRLPDLFQDQDKPEKQYAMARLDADGIIDTVLTAL 628


>gi|398383548|ref|ZP_10541616.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingobium sp. AP49]
 gi|397724564|gb|EJK85029.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingobium sp. AP49]
          Length = 640

 Score =  550 bits (1418), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 297/644 (46%), Positives = 398/644 (61%), Gaps = 34/644 (5%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V  P  L++L   +L+QLA E+R E  + V  T   L S L  VELT A+H+VF
Sbjct: 6   TPLLDTVHTPTDLRALQPDQLRQLADELRDETIAAVGVTGGHLGSGLGVVELTTAIHYVF 65

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P DK++WDVG Q Y HKILTGRR  I TLR+  G+SG+T R+ESEYDPF A H   S+
Sbjct: 66  DTPNDKLIWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTKRTESEYDPFGAAHSSTSI 125

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LG AVA  ++GK    + VI +G   AG AYEAM+NA    + ++VILND+  S+ P
Sbjct: 126 SAALGFAVANKMQGKPGKAIAVIGDGAMSAGMAYEAMNNAQEAGNRLVVILNDNDMSIAP 185

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                    +  LS+ L+R+ SS+ F  LR++AK + +++ R +H+ A K DE+ARGM  
Sbjct: 186 --------PVGGLSAYLARLVSSREFLGLRDLAKRLARKLPRPLHKAAKKTDEFARGMA- 236

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR-------- 370
             G TLFEELG YY+GPVDGHN++ LI VL+ V    + GPVL+HVVT++ +        
Sbjct: 237 -MGGTLFEELGFYYVGPVDGHNLDQLIPVLENVRD-NAEGPVLIHVVTQKGKGYAPAEAA 294

Query: 371 --RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGM 428
             +    QK + I   Q  A      P G  S  Y + F +AL+ EA++D  +  + A M
Sbjct: 295 ADKYHGVQKFDVITGTQAKA------PPGPPS--YTNVFAQALIAEAQRDPRLCAITAAM 346

Query: 429 EMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVND 488
                L  F+  FP+R FDVG+AEQHAVTF+AGLA  G++PFC I S FLQRAYDQVV+D
Sbjct: 347 PSGTGLDKFELAFPDRTFDVGIAEQHAVTFAAGLAAQGMRPFCAIYSTFLQRAYDQVVHD 406

Query: 489 VDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVAS 548
           V  Q LPVRF I  AGLVG+DG T  G+FD+T+++ LPN +VMA +DE ELV MV T A+
Sbjct: 407 VAIQNLPVRFAIDRAGLVGADGSTHAGSFDVTYLASLPNFVVMAAADEAELVHMVHTCAT 466

Query: 549 IDDRPVCFRYPRGAIVRTDLPGYRGIP--IEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
            D  P+  RYPRG      +P    IP  + IGKG++L EG+ VA+L  G  ++  +KA 
Sbjct: 467 HDSGPIAVRYPRGNGTGVAMP---KIPEALPIGKGRILREGRQVAILSLGTRLEEAIKAA 523

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGL 666
            +L   G+  +V D RF KPLD  L+R +   H   +T+EEG+IGG G+HV    +  GL
Sbjct: 524 DMLETKGLSASVVDLRFAKPLDEALIRRMLTTHEVAVTIEEGAIGGLGAHVLTLASDLGL 583

Query: 667 LDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
            D+G+K R + LPD + +   P +Q A A L    I  T L+ L
Sbjct: 584 TDAGLKIRTLRLPDIFQDQDKPEKQYADARLDADAIVDTVLTAL 627


>gi|428185733|gb|EKX54585.1| 1-deoxy-D-xylulose 5-phosphate synthase [Guillardia theta CCMP2712]
          Length = 756

 Score =  550 bits (1418), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 315/678 (46%), Positives = 417/678 (61%), Gaps = 47/678 (6%)

Query: 77  EPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHH 136
           +P P+LD V  P  +K L++ ELKQLA E+R E+   VSKT   L SSL   ELTVALH+
Sbjct: 72  KPKPVLDSVNFPSDMKKLSMAELKQLAYELRWEVIESVSKTGGHLSSSLGVTELTVALHY 131

Query: 137 VFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCN 196
           VF+AP D+I+WDV  Q Y HK+LTGRRS   TLR+  G+SG+T R ESE+D F AGH   
Sbjct: 132 VFNAPEDRIVWDVAHQCYPHKMLTGRRSRFSTLRQWGGLSGFTKRKESEFDCFGAGHSST 191

Query: 197 SVSAGLGMAVARDIKGK--RECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
           S+SA LGM+VA+D+ GK    CI  VI +G    G AYEAM+ AGYL+  MIVILN++  
Sbjct: 192 SISAALGMSVAKDLTGKPVNNCI-AVIGDGAITGGMAYEAMNCAGYLNQRMIVILNENGQ 250

Query: 255 SLHPKIEESPKTSI--NALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEY 312
              P    S    +   ALS + SRI SS+ F+  R VAK +TK +   + +   K+DE+
Sbjct: 251 VSLPTGTPSAAGVVPAGALSGSTSRILSSRPFQDARSVAKTLTKLLPEDLQKITRKIDEF 310

Query: 313 ARGMI-GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR- 370
            RG + G +G+ LFEELG YY+GP+DGH++E+LI +L+ +    S  PVL+HV TE+   
Sbjct: 311 GRGFVSGEEGAVLFEELGFYYLGPIDGHDLENLIPILENLRDSESKKPVLLHVKTEKGYG 370

Query: 371 -----RAED-----TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKD 420
                +A D      Q   A  KQ++  S   S         Y   F + LV  A +D  
Sbjct: 371 YLPALKASDKMHGVAQFDIATGKQKKPKSGPPS---------YTSVFADTLVELARQDPT 421

Query: 421 IVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQR 480
           +  + A M     L  F + FP+R FDVG+AEQHAVTF+AG+A  GLKPFC I S FLQR
Sbjct: 422 VCGITAAMPGGTGLDKFGKIFPKRTFDVGIAEQHAVTFAAGMAVDGLKPFCAIYSTFLQR 481

Query: 481 AYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELV 540
            YDQV++D   Q LPVRF++  AGLVG+DGPT  G FD+ ++  LPN+++MAP+DE EL+
Sbjct: 482 GYDQVIHDCIIQSLPVRFMVDRAGLVGNDGPTHHGCFDLAYLGTLPNIVIMAPADEIELM 541

Query: 541 DMVATVASIDDRPVCFRYPR----GAIVRTDLPGYR----GIPIE-----IGKGKVL--- 584
            MV T  +IDD+P   RYPR    GA     L GY      +P E     +G+G+++   
Sbjct: 542 RMVKTAHAIDDKPSVVRYPRGNGFGAEGLNKLFGYNLKSTPLPSEVSALPVGEGRMIRRA 601

Query: 585 -VEGK-DVALLGYGAMVQNCLKARALLSKL--GIDVTVADARFCKPLDIKLVRELCQNHT 640
             E K  VA+L  G  +   ++A  ++ +   GI VT+ADAR+ KPLD +L+R L + H 
Sbjct: 602 DPEAKTKVAILSLGTRLCEAVRALRMIQQEGNGIGVTIADARYMKPLDKELIRSLVEEHD 661

Query: 641 FLITVEEGSIGGFGSHVSHFIALDGLLDSG-VKWRPIVLPDNYIEHASPTQQLALAGLTG 699
            LITVEEG++GGFG HV+HF+  +GLLDSG  + R +VLPD ++E     QQ   AGL  
Sbjct: 662 VLITVEEGAVGGFGDHVNHFLTNEGLLDSGKCRLRVMVLPDQFVEAGGQKQQYDFAGLQA 721

Query: 700 HHIAATALSLLGRTREAL 717
            HIAATA   L R  EAL
Sbjct: 722 KHIAATAFRALDRQGEAL 739


>gi|404254956|ref|ZP_10958924.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingomonas sp. PAMC
           26621]
          Length = 641

 Score =  550 bits (1417), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 299/642 (46%), Positives = 388/642 (60%), Gaps = 22/642 (3%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           D   TP+LD V  P  L++L   EL+ LA E+R E  + V  T   L S L  VELTVA+
Sbjct: 3   DSHKTPLLDTVNVPADLRTLPATELRALADELRQETIAAVGVTGGHLGSGLGVVELTVAI 62

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H+VF  P D+++WDVG Q Y HKILTGRR  I TLR   G+SG+T RSESEYDPF A H 
Sbjct: 63  HYVFDTPRDRLVWDVGHQCYPHKILTGRRDRIRTLRMGGGLSGFTKRSESEYDPFGAAHS 122

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA LG A+A  I  K    + VI +G   AG AYEAM+NA    + ++VILND+  
Sbjct: 123 STSISASLGFAIANKIADKPGKAIAVIGDGAMSAGMAYEAMNNAAQAGNRLVVILNDNDM 182

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+ P +          LS+ LSRI SS+ F   RE+AK + K++ R      +K DE+AR
Sbjct: 183 SIAPPV--------GGLSAYLSRIVSSREFLGFRELAKRLAKKLPRPFASSLSKADEFAR 234

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAED 374
           G+    G TLFEELG YY+GP+DGHN+E LI VL+ V      GP+LVHVVT++ +    
Sbjct: 235 GLA--MGGTLFEELGFYYVGPIDGHNLEQLIPVLENVRD-AEEGPILVHVVTKKGKGYAP 291

Query: 375 TQ----KSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
            +    K   ++K    +      P G     Y + F   L+ EAE D  I  + A M  
Sbjct: 292 AEAAADKYHGVQKFDVISGVQTKAPPG--PPQYQNVFGAQLLKEAESDPTICAITAAMPS 349

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L  F + FP+R+FDVG+AEQHAVTF+AGLA  G++PFC I S FLQRAYDQVV+DV 
Sbjct: 350 GTGLDGFSKAFPDRFFDVGIAEQHAVTFAAGLAAQGMRPFCAIYSTFLQRAYDQVVHDVC 409

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q LPVRF I  AGLVG+DG T  G+FD+T+++ LPNM+VMAPSDE ELV M  T A  D
Sbjct: 410 IQNLPVRFAIDRAGLVGADGATHAGSFDVTYLATLPNMVVMAPSDEAELVHMTHTAALHD 469

Query: 551 DRPVCFRYPRGAIVRTDLPGYRGIP--IEIGKGKVLVEGKDVALLGYGAMVQNCLKARAL 608
             P+  RYPRG      +P    +P  +EIGKG+++ +G  VA++  G  +   LKA   
Sbjct: 470 SGPIAVRYPRGNGTGVAMP---EVPERLEIGKGRIVRQGHKVAIMALGTRLGEALKAADA 526

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLD 668
           L   G+  TVAD RF KPLD +L+R+L   H   +T+EE S+GG G+HV  F +  GL+D
Sbjct: 527 LEAKGLSTTVADLRFAKPLDEELIRKLLTTHEVAVTIEESSVGGLGAHVLTFASDTGLID 586

Query: 669 SGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
           +G+K R + LPD + +   P  Q A AGL    I  T L  L
Sbjct: 587 AGLKLRTLRLPDVFQDQDKPEAQYAEAGLDADAIVETVLKAL 628


>gi|197104378|ref|YP_002129755.1| 1-deoxy-D-xylulose-5-phosphate synthase [Phenylobacterium zucineum
           HLK1]
 gi|254782082|sp|B4RGW0.1|DXS_PHEZH RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|196477798|gb|ACG77326.1| 1-deoxy-D-xylulose-5-phosphate synthase [Phenylobacterium zucineum
           HLK1]
          Length = 638

 Score =  550 bits (1416), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 297/639 (46%), Positives = 397/639 (62%), Gaps = 22/639 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V +P   + L+I +L+QLA E+R+E    VS+T   L + L  VELTVALHHV+
Sbjct: 5   TPLLDTVSSPADTRGLSIAQLRQLADEVRAETIDAVSQTGGHLGAGLGVVELTVALHHVY 64

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D ++WDVG Q Y HKILTGRR  I TLR+  G+SG+T R+ES+YDPF A H   S+
Sbjct: 65  ETPKDILIWDVGHQAYPHKILTGRRDRIRTLRQGGGLSGFTKRAESDYDPFGAAHAATSI 124

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LG   ARD +G+   +V VI +G+  AG AYEAM+NA      + VILND+  S+ P
Sbjct: 125 SAALGFCAARDREGRDNKVVAVIGDGSMSAGMAYEAMNNAYETTKQLTVILNDNDMSIAP 184

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                    +  +S+ ++R+ S   ++ LR + K +++   R + E A K +EYARGM+ 
Sbjct: 185 --------PVGGMSAYMARLVSGGGYQSLRNLGKAVSRAFPRPLQEAARKAEEYARGMV- 235

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR------RA 372
             G T FEELG YY+GP+DGH+++ L+ VLQ    +    PVLVHVVT++ +      +A
Sbjct: 236 -TGGTFFEELGFYYVGPIDGHDMDALVHVLQNARKIDDK-PVLVHVVTQKGKGYAPAEKA 293

Query: 373 EDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
            D            GA   +     +Y++     F + LV  AE+D+ +V + A M    
Sbjct: 294 ADKYHGVVKFDVVTGAQAKSQAAAPSYTK----VFAQELVKHAERDERVVAITAAMPSGT 349

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            L LF ++FPER FDVG+AEQHAVTF+AGLA  G+KPF  I S FLQR YDQVV+DV  Q
Sbjct: 350 GLDLFGQRFPERTFDVGIAEQHAVTFAAGLAADGMKPFAAIYSTFLQRGYDQVVHDVAIQ 409

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
            LPVRF I  AGLVG+DGPT  G+FD+ FM  LP M+VM P+DE EL   +AT  +IDDR
Sbjct: 410 SLPVRFAIDRAGLVGADGPTHAGSFDVGFMGQLPGMVVMGPADEAELARAIATAVAIDDR 469

Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
           P  FRYPRG  V  ++P     P+EIG+G+++ EG  VA+L +G  +   LKA  +L+  
Sbjct: 470 PSAFRYPRGEGVGVEIPAL-ADPLEIGRGRIVREGTAVAILSFGTRLGESLKAADMLAAR 528

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 672
           G+  TVADARF KPLD+ L+  L + H  LITVEEG++GGFG  V H +A  G LD G+K
Sbjct: 529 GLSATVADARFAKPLDVDLLLRLAREHEALITVEEGAVGGFGGFVLHALAEHGALDRGLK 588

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
            R + LPD + +   P    A AGL    I   AL+ LG
Sbjct: 589 IRTLTLPDIFQDQDKPEAMYAQAGLDAEGIVRAALAALG 627


>gi|103487835|ref|YP_617396.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingopyxis alaskensis
           RB2256]
 gi|118595621|sp|Q1GQK9.1|DXS_SPHAL RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|98977912|gb|ABF54063.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Sphingopyxis alaskensis
           RB2256]
          Length = 642

 Score =  549 bits (1414), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 299/648 (46%), Positives = 394/648 (60%), Gaps = 34/648 (5%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           D+  TP+LD V+ P  L+ L  ++L+Q A E+R+E+ S V  T   L S L  VELT A+
Sbjct: 3   DRPHTPLLDTVDVPADLRKLKPEDLRQFADELRAEMISAVGTTGGHLGSGLGVVELTTAI 62

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H+VF  P DK++WDVG Q Y HKI+TGRR  I TLR+  G+SG+T RSESEYDPF A H 
Sbjct: 63  HYVFDTPRDKLVWDVGHQCYPHKIITGRRDRIRTLRQGGGLSGFTKRSESEYDPFGAAHS 122

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA LG A+A  +K +    + VI +G+  AG AYEAM+NA    + +IVILND+  
Sbjct: 123 STSISAALGFAIANKLKDEPGRAIAVIGDGSMSAGMAYEAMNNAKQAGNRLIVILNDNDM 182

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+ P         +  LS+ L+++ SS+ F +LRE+A+   +++   +H+ A K DEYAR
Sbjct: 183 SIAP--------PVGGLSAYLAKLVSSRPFLELREIARRFARKLPEPLHKAAKKTDEYAR 234

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---- 370
           GM    G TLFEELG YY+GP+DGHN++ LI +L+ V      GPVL+H VT++ +    
Sbjct: 235 GMA--MGGTLFEELGFYYVGPIDGHNLDHLIPILENVRD-SDHGPVLIHAVTKKGKGYAP 291

Query: 371 ------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVV 424
                 +    QK + I  +Q  A      P G     Y + F E L   AE DK IV +
Sbjct: 292 AEAAADKYHGVQKFDVITGEQAKA------PPG--PPAYQNVFGETLAKLAETDKRIVAI 343

Query: 425 HAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQ 484
            A M     +  F +  P+R FDVG+AEQHAVTF+AGLA  G++PF  I S FLQRAYDQ
Sbjct: 344 TAAMPSGTGVDKFAKVHPDRSFDVGIAEQHAVTFAAGLAAQGMRPFAAIYSTFLQRAYDQ 403

Query: 485 VVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVA 544
           VV+DV  Q LPVRF I  AGLVG+DG T  G+FDIT+++ LPNM+VMA +DE ELV M  
Sbjct: 404 VVHDVAIQNLPVRFAIDRAGLVGADGSTHAGSFDITYLATLPNMVVMAAADEAELVHMTY 463

Query: 545 TVASIDDRPVCFRYPRGAIVRTDLPGYRGIP--IEIGKGKVLVEGKDVALLGYGAMVQNC 602
           T A  D  P+ FRYPRG      LP    +P  +EIGKG+V+ EGK VA+L  G  +   
Sbjct: 464 TAAEHDAGPIAFRYPRGNGTGVALP---AVPQKLEIGKGRVVREGKTVAILSLGTRLAEA 520

Query: 603 LKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIA 662
           LKA   L   G+  +V D RF KPLD +L+R     H   +TVEEGSIGG G+HV    +
Sbjct: 521 LKAADTLEARGLSTSVIDLRFAKPLDEELIRRTLAAHEVCVTVEEGSIGGLGAHVLTLAS 580

Query: 663 LDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
            +GL+D+G+K R + LPD + +   P  Q   AGL    I  T L  L
Sbjct: 581 DEGLIDAGLKLRTLRLPDMFQDQDKPELQYDAAGLNAPQIVDTVLKAL 628


>gi|332185973|ref|ZP_08387719.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingomonas sp. S17]
 gi|332013788|gb|EGI55847.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingomonas sp. S17]
          Length = 641

 Score =  549 bits (1414), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 303/646 (46%), Positives = 391/646 (60%), Gaps = 30/646 (4%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           D   TP+LD V  P  L+ L  ++L+QLA E+R+E  S V  T   L S L  VELTVAL
Sbjct: 3   DIPQTPLLDTVHTPDDLRRLAPEQLRQLADELRTETISAVGTTGGHLGSGLGVVELTVAL 62

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H+VF+ P D+++WDVG Q Y HKILTGRR  I T+R+  G+SG+T RSESEYDPF A H 
Sbjct: 63  HYVFNTPADRLVWDVGHQCYPHKILTGRRDRIRTIRQGGGLSGFTKRSESEYDPFGAAHS 122

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA LG AVA  + G     + VI +G   AG AYEAM+NA    + +IVILND+  
Sbjct: 123 STSISAALGFAVANKLAGTPGKGIAVIGDGAMSAGMAYEAMNNAEQAGNRLIVILNDNDM 182

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+ P         +  LS+ LSRI SS+ F  +R+V K + KR  R + + A K DE+AR
Sbjct: 183 SIAP--------PVGGLSAYLSRIVSSREFLGVRDVFKKLAKRFPRPIQKAARKTDEFAR 234

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---- 370
           GM    G TLFEELG YY+GP+DGHN++ LI VL+ V      GP+L+HVVT++ +    
Sbjct: 235 GMT--MGGTLFEELGFYYVGPIDGHNLDHLIPVLENVRD-AEEGPILIHVVTKKGKGYAP 291

Query: 371 ------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVV 424
                 +    QK + I   Q  A      P G     Y + F E L  EAE D  I  +
Sbjct: 292 AEAAADKYHGVQKFDVITGAQAKA------PPG--PPAYQNVFGETLSREAESDPRICAI 343

Query: 425 HAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQ 484
            A M     L  F    P+R+FDVG+AEQHAVTF+AGLA  G++PFC I S FLQRAYDQ
Sbjct: 344 TAAMPSGTGLDKFAAAHPDRFFDVGIAEQHAVTFAAGLAAQGMRPFCAIYSTFLQRAYDQ 403

Query: 485 VVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVA 544
           VV+DV  Q LPVRF I  AGLVG+DG T  G+FD+T+++ LPNM+VMA +DE ELV MV 
Sbjct: 404 VVHDVAIQNLPVRFAIDRAGLVGADGATHAGSFDVTYLASLPNMVVMAAADEAELVHMVH 463

Query: 545 TVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLK 604
           T  + D  P+  RYPRG  V   LP    + +EIGKG+++ EGK VA+L  G  +   L+
Sbjct: 464 TCVNHDSGPIAVRYPRGNGVGVALPETPEL-LEIGKGRLVREGKKVAILSLGTRLGEALR 522

Query: 605 ARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALD 664
           A   L   G+  +VAD RF KPLD  L+R L   H   +T+EE +IGG G+HV    + +
Sbjct: 523 AADALEAKGLSTSVADLRFAKPLDEALIRRLLTTHEVAVTIEENAIGGLGAHVLTMASDE 582

Query: 665 GLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
           GL+D+G+K R + LPD + +   P  Q A AGL    I  T L  L
Sbjct: 583 GLIDAGLKLRTMRLPDLFQDQDKPEVQYAQAGLDADAIVETVLKAL 628


>gi|395491697|ref|ZP_10423276.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingomonas sp. PAMC
           26617]
          Length = 641

 Score =  548 bits (1413), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 298/640 (46%), Positives = 386/640 (60%), Gaps = 18/640 (2%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           D   TP+LD V  P  L++L   EL+ LA E+R E  + V  T   L S L  VELTVA+
Sbjct: 3   DSHKTPLLDTVNVPADLRTLPATELRALADELRQETIAAVGVTGGHLGSGLGVVELTVAI 62

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H+VF  P D+++WDVG Q Y HKILTGRR  I TLR   G+SG+T RSESEYDPF A H 
Sbjct: 63  HYVFDTPRDRLVWDVGHQCYPHKILTGRRDRIRTLRMGGGLSGFTKRSESEYDPFGAAHS 122

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA LG A+A  I  K    + VI +G   AG AYEAM+NA    + ++VILND+  
Sbjct: 123 STSISASLGFAIANKIADKPGKAIAVIGDGAMSAGMAYEAMNNAAQAGNRLVVILNDNDM 182

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+ P +          LS+ LSRI SS+ F   RE+AK + K++ R      +K DE+AR
Sbjct: 183 SIAPPV--------GGLSAYLSRIVSSREFLGFRELAKRLAKKLPRPFASSLSKADEFAR 234

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAED 374
           G+    G TLFEELG YY+GP+DGHN+E LI VL+ V      GP+LVHVVT++ +    
Sbjct: 235 GLA--MGGTLFEELGFYYVGPIDGHNLEQLIPVLENVRD-AEEGPILVHVVTKKGKGYAP 291

Query: 375 TQ----KSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
            +    K   ++K    +      P G     Y + F   L+ EAE D  I  + A M  
Sbjct: 292 AEAAADKYHGVQKFDVISGVQTKAPPG--PPQYQNVFGAQLLKEAESDPTICAITAAMPS 349

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L  F + FP+R+FDVG+AEQHAVTF+AGLA  G++PFC I S FLQRAYDQVV+DV 
Sbjct: 350 GTGLDGFSKAFPDRFFDVGIAEQHAVTFAAGLAAQGMRPFCAIYSTFLQRAYDQVVHDVC 409

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q LPVRF I  AGLVG+DG T  G+FD+T+++ LPNM+VMAPSDE ELV M  T A  D
Sbjct: 410 IQNLPVRFAIDRAGLVGADGATHAGSFDVTYLATLPNMVVMAPSDEAELVHMTHTAALHD 469

Query: 551 DRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLS 610
             P+  RYPRG      +P      +EIGKG+++ +G  VA++  G  +   LKA   L 
Sbjct: 470 SGPIAVRYPRGNGTGVAMPEV-AERLEIGKGRIVRQGHKVAIMALGTRLGEALKAADALE 528

Query: 611 KLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSG 670
             G+  TVAD RF KPLD +L+R+L   H   +T+EE S+GG G+HV  F +  GL+D+G
Sbjct: 529 AKGLSTTVADLRFAKPLDEELIRKLLTTHEVAVTIEESSVGGLGAHVLTFASDTGLIDAG 588

Query: 671 VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
           +K R + LPD + +   P  Q A AGL    I  T L  L
Sbjct: 589 LKLRTLRLPDVFQDQDKPEAQYAEAGLDADAIVETVLKAL 628


>gi|170744434|ref|YP_001773089.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacterium sp. 4-46]
 gi|168198708|gb|ACA20655.1| deoxyxylulose-5-phosphate synthase [Methylobacterium sp. 4-46]
          Length = 663

 Score =  548 bits (1412), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 302/641 (47%), Positives = 404/641 (63%), Gaps = 44/641 (6%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+LD V +P  L++L   +L QLA E+R+E    VS T   L + L  VELTVALH+VFH
Sbjct: 7   PLLDRVRDPSELRALPESDLAQLAAELRAETIDAVSVTGGHLGAGLGVVELTVALHYVFH 66

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG Q Y HKILTGRR  I TLR+  G+SG+T R+ES YDPF A H   S+S
Sbjct: 67  TPDDRLIWDVGHQAYPHKILTGRRDRIRTLRQGGGLSGFTKRAESPYDPFGAAHSSTSIS 126

Query: 200 AGLGMAVARDIKG----------KRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVIL 249
           AGLGMAVARD+            +R  +V VI +G+  AG AYEAM+NAG L S ++VIL
Sbjct: 127 AGLGMAVARDLAEAAARARGETPERRNVVAVIGDGSISAGMAYEAMNNAGALRSRLVVIL 186

Query: 250 NDSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKV 309
           ND   S+ P +         A+S+ L+R+ S  ++R LR+ A+   + + + +++ A + 
Sbjct: 187 NDM--SIAPPV--------GAMSAYLARLVSGDTYRSLRDTARQFGRLLPKALYDTAVRA 236

Query: 310 DEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN 369
           +EYARG++   G T+FEELG +Y+GP+DGHN++ L+ +L+ V      GPVLVHVVT++ 
Sbjct: 237 EEYARGILA-GGGTMFEELGFHYVGPIDGHNLDHLLPILKNVRD-APEGPVLVHVVTQKG 294

Query: 370 R----------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDK 419
           +          R     K + +  QQ  A  +        + TY   F E+LV  A+ D 
Sbjct: 295 KGYAPAEAAADRGHAVVKFDVVSGQQVKAKAN--------APTYTRVFGESLVKAADADD 346

Query: 420 DIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQ 479
            +V + A M     + LF +  P R FDVG+AEQHAVTF+AGLA  G +PFC I S FLQ
Sbjct: 347 KVVAITAAMPSGTGVDLFAKAHPGRTFDVGIAEQHAVTFAAGLAAEGYRPFCAIYSTFLQ 406

Query: 480 RAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDEL 539
           RAYDQVV+DV  Q LPVRF +  AGLVG+DG T  GAFD+ ++ CLPNM+VMA +DE EL
Sbjct: 407 RAYDQVVHDVALQNLPVRFALDRAGLVGADGATHAGAFDLAYLCCLPNMVVMAAADEAEL 466

Query: 540 VDMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVL--VEGKDVALLGYGA 597
           V MVAT  + D  P+ FRYPRG  V  DLP  +G  + +G+G+V+   EG  VAL+  G 
Sbjct: 467 VHMVATAHAHDAGPIAFRYPRGEGVGVDLP-EKGEVLALGRGRVIRRPEGARVALVSLGT 525

Query: 598 MVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHV 657
            +   LKA   L + GI VTVADARF KPLD  L+ +L  +H  L+TVEEGS GGFG+ V
Sbjct: 526 RLAEALKAAEQLEERGIGVTVADARFAKPLDEGLLLDLAGSHEVLVTVEEGSTGGFGAMV 585

Query: 658 SHFIALDGLLDSG-VKWRPIVLPDNYIEHASPTQQLALAGL 697
            H +A  G LD+G V+ R + LPD+Y +H +P +  A AGL
Sbjct: 586 LHLLAGRGALDAGTVRVRTLTLPDSYQDHDTPERMYAQAGL 626


>gi|114798103|ref|YP_760539.1| 1-deoxy-D-xylulose-5-phosphate synthase [Hyphomonas neptunium ATCC
           15444]
 gi|122942403|sp|Q0C154.1|DXS_HYPNA RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|114738277|gb|ABI76402.1| 1-deoxy-D-xylulose-5-phosphate synthase [Hyphomonas neptunium ATCC
           15444]
          Length = 640

 Score =  546 bits (1407), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 305/646 (47%), Positives = 405/646 (62%), Gaps = 28/646 (4%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           +  P  +LD ++ P  LK  +  +LKQ+A E+R E+  +VS T   L S L  VELTVA+
Sbjct: 3   ETRPNRLLDAIDTPSDLKGRSRADLKQIAAEVREEVVDVVSVTGGHLGSGLGVVELTVAI 62

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H VF  P DK++WDVG Q Y HKILTGR+  + TLR+  G+SG+T RSESEYDPF A H 
Sbjct: 63  HSVFDTPDDKLVWDVGHQCYPHKILTGRKDRMRTLRQGGGLSGFTKRSESEYDPFGAAHA 122

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SAGLG A +RD++ K   ++ VI +G+  AG AYEAM+NAG   S MIVILND+  
Sbjct: 123 STSISAGLGFAKSRDLQNKDNHVICVIGDGSMSAGMAYEAMNNAGADRSRMIVILNDNDM 182

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+ P         + A+S   SR+ SS+ +R LR +AK + + +  G+   A + +EY R
Sbjct: 183 SIAP--------PVGAMSHYFSRLVSSRPYRGLRRIAKKVVQPM--GLESPARRAEEYLR 232

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRR--- 371
           G     G TLFEE+G YYIGPVDGH+++ L+ +L+ + ++   GP+L+HVVT++ +    
Sbjct: 233 GFA--MGGTLFEEMGFYYIGPVDGHDLDTLLDLLENIKAMQD-GPILLHVVTQKGKGYAP 289

Query: 372 AEDT-QKSEAIEK----QQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHA 426
           AE++  K   + K      E A  +   P      +Y   F + L    E D  I  + A
Sbjct: 290 AENSADKYHGVSKFSVVTGEQAKGAGGPP------SYQKVFGQTLAKLGETDDKICAITA 343

Query: 427 GMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVV 486
            M    S  +F +KFP+R+FDVG+AEQHAVTF+AGLA  G+KPFC I S FLQR YDQVV
Sbjct: 344 AMPSGTSTDIFGKKFPDRHFDVGIAEQHAVTFAAGLAADGMKPFCAIYSTFLQRGYDQVV 403

Query: 487 NDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATV 546
           +DV  Q+LPVRF I  AGLVG+DG T  G+FDI ++  LP  + MAPSDE EL  MV T 
Sbjct: 404 HDVAIQQLPVRFAIDRAGLVGADGATHAGSFDIGYLGALPGFVCMAPSDEAELARMVLTS 463

Query: 547 ASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
             IDDRP   RYPRG  V   +P     P+EIGKG+V+ EG  +A+L YG  +Q  LKA 
Sbjct: 464 LEIDDRPSAVRYPRGEGVGVVIPDLL-KPLEIGKGRVVREGTSIAILSYGTRLQEALKAA 522

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGL 666
            +L+  G+  TVADARF KPLD +L+  L + H  L+T+EEGS GGFGS V   +A  G 
Sbjct: 523 EMLAAQGLSATVADARFAKPLDNELIERLAREHEVLVTIEEGSRGGFGSFVLEHLANCGG 582

Query: 667 LDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
           LD+G+K R + LPD + +H +P      AGLT  HIAA A+  LGR
Sbjct: 583 LDAGLKVRVMTLPDVFQDHDTPAAMYDQAGLTARHIAARAIEALGR 628


>gi|61653206|gb|AAX48160.1| deoxyxylulose-5-phosphate synthase [uncultured proteobacterium
           DelRiverFos13D03]
          Length = 631

 Score =  546 bits (1406), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 297/627 (47%), Positives = 394/627 (62%), Gaps = 28/627 (4%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +LD V +P  LK+++  EL +LA E+R+E+ S+VSKT   L SSL  VELTVA+H VF A
Sbjct: 3   LLDKVSSPADLKAMSDAELGRLADEVRAEVISVVSKTGGHLGSSLGVVELTVAIHAVFDA 62

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           PVDK++WDVG Q Y HKILTGRR  +H+LR++ G+SG+T RSES YDPF A H   S+SA
Sbjct: 63  PVDKLIWDVGHQCYPHKILTGRRDRMHSLRQEGGVSGFTKRSESVYDPFGAAHSSTSISA 122

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKI 260
            LG  + RD+       + VI +G   AG AYEAM+ AG+L   M VILND+  S+ P  
Sbjct: 123 ALGFTLGRDMGQPTGDAIAVIGDGAITAGMAYEAMNAAGHLGKRMFVILNDNDMSIAPP- 181

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQ 320
                  + AL+  L+ +   K F  LR++A+G    +   + E A +  +   GM  P 
Sbjct: 182 -------VGALNRYLNGLSRHKPFDLLRDMAEGFEAALPGPLREGARRARQIVTGM--PS 232

Query: 321 GSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRR---AEDT-Q 376
           G+TLFE+LG  YIGPVDGH++ DL++ L+  A   + GPVL+H VT + +    AE++  
Sbjct: 233 GATLFEQLGFSYIGPVDGHSMPDLLATLR-AAKTRATGPVLIHAVTVKGKGYAPAENSAD 291

Query: 377 KSEAIEK-----QQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMD 431
           K   + K       +  + SN+     Y+  +  C  EA    A +D  IV V A M   
Sbjct: 292 KYHGVAKFDVVSGTQAKAKSNAP---AYTSVFGRCLTEA----AARDGKIVAVTAAMPTG 344

Query: 432 LSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQ 491
             L +  E+FP R FDVG+AEQHAVTF+AG+A  GLKPF  I S FLQR YDQ+V+DV  
Sbjct: 345 TGLDIMAERFPARVFDVGIAEQHAVTFAAGMAASGLKPFVAIYSTFLQRGYDQIVHDVAL 404

Query: 492 QRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDD 551
           Q LPVRF I  AGLVG+DG T  GAFD+ F++ LP  +VMA  DE EL  MVAT A+ D+
Sbjct: 405 QGLPVRFAIDRAGLVGADGATHAGAFDVGFLANLPGFVVMAAGDEAELAHMVATAAAYDE 464

Query: 552 RPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSK 611
            P+ FRYPRG      +P  +G  ++IGKG+VL +G DVALL +GA +  CL A   L+ 
Sbjct: 465 GPISFRYPRGEGSGVQMPD-QGQVLQIGKGRVLRQGSDVALLCFGAHLPECLLAAEGLAA 523

Query: 612 LGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGV 671
            GI VTVADARF KPLD  L+ +L ++H  +ITVE+G+ GGFG+ V  ++A  G LD GV
Sbjct: 524 QGISVTVADARFAKPLDTDLITQLARHHQAVITVEQGARGGFGAQVLEYMANSGGLDHGV 583

Query: 672 KWRPIVLPDNYIEHASPTQQLALAGLT 698
           + R + LPD +IE ASP    A AGL+
Sbjct: 584 RLRTLTLPDRFIEQASPAAMYADAGLS 610


>gi|413945325|gb|AFW77974.1| hypothetical protein ZEAMMB73_720473 [Zea mays]
          Length = 442

 Score =  545 bits (1404), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 270/440 (61%), Positives = 326/440 (74%), Gaps = 17/440 (3%)

Query: 291 AKGMTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQE 350
           ++G+TK+IG  +HE AAKVDEYARGMI   GS+LFEELGLYYIGPVDGHNI+DLI++L +
Sbjct: 5   SQGVTKQIGGSVHELAAKVDEYARGMISGPGSSLFEELGLYYIGPVDGHNIDDLITILND 64

Query: 351 VASLGSMGPVLVHVVTEENR------RAEDTQKSEAIEKQQEGA---SDSNSLPFGNYSR 401
           V S  + GPVL+HVVTE+ R      RA D     A      G    S + +L + NY  
Sbjct: 65  VKSTKTTGPVLIHVVTEKGRGYPYAERAADKYHGVAKFDPATGKQFKSPAKTLSYTNY-- 122

Query: 402 TYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAG 461
                F EAL+ EAE+D  IV +HA M     L  F  +FP R FDVG+AEQHAVTF+AG
Sbjct: 123 -----FAEALIAEAEQDSKIVAIHAAMGGGTGLNYFLRRFPSRCFDVGIAEQHAVTFAAG 177

Query: 462 LACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITF 521
           LAC GLKPFC I S+FLQR YDQVV+DVD Q+LPVRF +  AGLVG+DGPT CGAFD+ +
Sbjct: 178 LACEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVAY 237

Query: 522 MSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYPRGAIVRTDL-PGYRGIPIEIGK 580
           M+CLPNM+VMAPSDE EL  MVAT A+IDDRP CFRYPRG  V   L P Y+G P+E+GK
Sbjct: 238 MACLPNMVVMAPSDEAELCHMVATAAAIDDRPSCFRYPRGNGVGVPLPPNYKGTPLEVGK 297

Query: 581 GKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHT 640
           G++L+EG  VALLGYG+ VQ CL A +L+ + G+ VTVADARFCKPLD  L+R L ++H 
Sbjct: 298 GRILLEGDRVALLGYGSAVQYCLTAASLVQRHGLKVTVADARFCKPLDHALIRSLAKSHE 357

Query: 641 FLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGH 700
            LITVEEGSIGGFGSHV+ F+ALDGLLD  +KWRP+VLPD YI+H SP  QLA AGLT  
Sbjct: 358 VLITVEEGSIGGFGSHVAQFMALDGLLDGKLKWRPLVLPDRYIDHGSPADQLAEAGLTPS 417

Query: 701 HIAATALSLLGRTREALLLM 720
           HIAA+  ++LG+ REAL +M
Sbjct: 418 HIAASVFNILGQNREALAIM 437


>gi|149202070|ref|ZP_01879043.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseovarius sp. TM1035]
 gi|149144168|gb|EDM32199.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseovarius sp. TM1035]
          Length = 661

 Score =  545 bits (1404), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 299/630 (47%), Positives = 392/630 (62%), Gaps = 20/630 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD +  P  L+ +  ++L  LA E+R+E+ S VS+T   L SSL  VELTVA+H VF
Sbjct: 27  TPLLDRIAGPSDLRQMPDRQLAALADELRAEVISAVSETGGHLGSSLGVVELTVAIHAVF 86

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P+DK++WDVG Q Y HKILTGRR  I TLR+KDG+SG+T RSES YDPF A H   S+
Sbjct: 87  STPMDKLIWDVGHQCYPHKILTGRRDRIRTLRQKDGLSGFTKRSESIYDPFGAAHSSTSI 146

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LG AV RD+       + VI +G+  AG AYEA++NAG     + VILND+  S+ P
Sbjct: 147 SAALGFAVGRDMGQATGDAIAVIGDGSISAGMAYEALNNAGAEGRRLFVILNDNEMSIAP 206

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                    + A+SS LSR+ +S+   ++  +A+G    +   + E A +  +   G+ G
Sbjct: 207 P--------VGAMSSYLSRMYASEPLARMASLAEGFEAALPTPLRESAKRARQLVTGLTG 258

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQ-- 376
               TLFEELG  Y+GP+DGH++  L+SVL+  A   + GPVL+HV T + +     +  
Sbjct: 259 --SGTLFEELGFQYVGPIDGHDMGQLLSVLR-AARTRATGPVLIHVCTVKGKGYAPAEGA 315

Query: 377 --KSEAIEK-QQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
             K   + K      + + S P    + +Y   F +ALV EA +D  IV V A M     
Sbjct: 316 ADKGHGVSKFDPATGAQAKSKP---GAPSYTGVFGQALVDEAARDDRIVAVTAAMPDGTG 372

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L    E+FP R FDVG+AEQHAVTF+AG+A  GLKPFC I S FLQRAYDQVV+DV  Q 
Sbjct: 373 LTKMAERFPARVFDVGIAEQHAVTFAAGMAASGLKPFCTIYSTFLQRAYDQVVHDVALQG 432

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPVRF I  AGLVG+DG T  GAFDI ++  LP M +MA +DE ELV MVAT A+ D  P
Sbjct: 433 LPVRFAIDRAGLVGADGATHAGAFDIGYLGNLPGMTLMAAADEAELVHMVATAAAHDAGP 492

Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
           + FRYPRG+     LP  RG P+ IGKG+V+ EG DVA+L +GA +  C  A  +++  G
Sbjct: 493 IAFRYPRGSGTGVALP-ERGKPLAIGKGRVIEEGTDVAILSFGAHLFECQVAADMVADDG 551

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKW 673
           I VTVADARF KPLD  L+ +L  +H  LITVE+G++GGFGS V H +A  G  D G+  
Sbjct: 552 ITVTVADARFAKPLDTDLLMQLVGHHRALITVEQGAMGGFGSMVLHELARRGAFDKGLIL 611

Query: 674 RPIVLPDNYIEHASPTQQLALAGLTGHHIA 703
           R + LPD +I+ A P    A AGL+   IA
Sbjct: 612 RTLCLPDRFIDQADPADMYADAGLSATDIA 641


>gi|406706618|ref|YP_006756971.1| 1-deoxy-D-xylulose-5-phosphate synthase [alpha proteobacterium
           HIMB5]
 gi|406652394|gb|AFS47794.1| 1-deoxy-D-xylulose-5-phosphate synthase [alpha proteobacterium
           HIMB5]
          Length = 637

 Score =  545 bits (1404), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 285/616 (46%), Positives = 386/616 (62%), Gaps = 25/616 (4%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
            L+ +  P  LK ++ K+LK ++ E+R E+   VS T   L +SL  VELTVALH+VF+ 
Sbjct: 7   FLNQINFPSDLKKISEKDLKVVSDELREEVIDAVSTTGGHLGASLGVVELTVALHYVFNT 66

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P DKI+WDVG Q+Y HKILTGR+  I TLR+  GISG+T R+ESEYDPF A H   S+SA
Sbjct: 67  PQDKIIWDVGHQSYPHKILTGRKDKIRTLRQGGGISGFTKRTESEYDPFGAAHSSTSISA 126

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKI 260
           GLG+A A  +  K + ++ VI +G   AG AYEAM+NAG   + MIVILND+        
Sbjct: 127 GLGIAEANKLSNKNDEVIAVIGDGAISAGMAYEAMNNAGTSKAKMIVILNDN-------- 178

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQ 320
           E S    + A+S+ L++I S K +  LRE  K +T    +     A K ++  R  +   
Sbjct: 179 EMSIAKPVGAMSTYLAKIFSGKIYFSLRETIKLITSAFSKRFSAKAGKAEDLFRSAV--T 236

Query: 321 GSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE- 379
           G TLF  LG YYIGP+DGH++  L+ +L+ V      GP+L+H+ T++ +     +K+  
Sbjct: 237 GGTLFHSLGFYYIGPIDGHDLTTLVPILKNVKQSKHQGPILIHIKTQKGKGYSFAEKAND 296

Query: 380 ---AIEKQQEGASD----SNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
               + K   G  +    S S P      +Y   F + L+  A+KD  IV V A M    
Sbjct: 297 HYHGVSKFNVGTGEQVKASASAP------SYTKVFAKTLIEHAKKDSKIVAVTAAMPGGT 350

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            L +F ++FP R +DVG+AEQHAVTF+AGLA    KP+  I S FLQRAYDQ+V+DV  Q
Sbjct: 351 GLDVFGKEFPSRMYDVGIAEQHAVTFAAGLATENYKPYAAIYSTFLQRAYDQIVHDVAIQ 410

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
            LPVRF I  AGLVG+DGPT  G+FDIT++S LPN I+MA SDE ELV M+ T   I+D+
Sbjct: 411 SLPVRFAIDRAGLVGADGPTHAGSFDITYLSTLPNFIIMAASDEAELVRMINTSVDINDK 470

Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
           P  FRYPRG  + T+LP      IEIGKG+++ EGK +A+L +G  +   LKA   L K 
Sbjct: 471 PCAFRYPRGTGLGTELPPISE-KIEIGKGRIIQEGKKLAVLNFGTRLSEVLKASENLKKK 529

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 672
           GI++TV DARF KPLD  L+ +L   H  ++T+EEG+IGGFGSHV +F+    LLDS +K
Sbjct: 530 GINITVIDARFAKPLDENLIWQLATTHESILTIEEGAIGGFGSHVVNFLTKKNLLDSNLK 589

Query: 673 WRPIVLPDNYIEHASP 688
           +R ++LPD +I+   P
Sbjct: 590 FRSMILPDLFIDQDKP 605


>gi|126741030|ref|ZP_01756713.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseobacter sp. SK209-2-6]
 gi|126717956|gb|EBA14675.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseobacter sp. SK209-2-6]
          Length = 642

 Score =  544 bits (1402), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 293/651 (45%), Positives = 397/651 (60%), Gaps = 34/651 (5%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           D+  TP+LD +  P  +K L+  +L QLA E+R E  S VS T   L + L  VELTVAL
Sbjct: 3   DRPNTPLLDQIARPADMKGLSDAQLVQLAHELRQETISAVSVTGGHLGAGLGVVELTVAL 62

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H VF  P DK++WDV  Q Y HKILT RR  I TLR K+G+SG+T RSES YDPF A H 
Sbjct: 63  HAVFDTPRDKLIWDVSHQCYPHKILTERRDRIRTLRMKEGLSGFTKRSESPYDPFGAAHS 122

Query: 195 CNSVSAGLGMAVARDIKG----KRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
             S+SA LG +VARD+ G         + VI +G+  AG A+EAM+NAG+L+  + V+LN
Sbjct: 123 STSISAALGFSVARDLGGVIPEGNGDAIAVIGDGSMSAGMAFEAMNNAGHLNKRLFVVLN 182

Query: 251 DSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVD 310
           D+  S+ P         + ALSS LSR+ + + F++L+ VAKG    +     E A +  
Sbjct: 183 DNEMSIAP--------PVGALSSYLSRLYAEEPFQELKAVAKGAASLLPEPFREGAKRAK 234

Query: 311 EYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR 370
           +  +GM    G TLFE LG  Y+GP+DGH+++ L+ VL+ + +  + GPVL+HV+T++ +
Sbjct: 235 DMLKGMA--VGGTLFESLGFSYLGPIDGHDMDQLLPVLRTLKARAT-GPVLIHVLTKKGK 291

Query: 371 ----------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKD 420
                     +   T K + +  +Q  A  +        + +Y   F   LV  A KD  
Sbjct: 292 GYGPAETARDKGHATAKFDVLTGKQHKAPSN--------APSYTSVFGNELVKLAAKDDK 343

Query: 421 IVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQR 480
           I  V A M     L L  E++P R FDVG+AEQH VTF+  LA GG+KPFC + S FLQR
Sbjct: 344 ICAVTAAMPDGTGLALMAERYPSRTFDVGIAEQHGVTFAGALAAGGMKPFCAMYSTFLQR 403

Query: 481 AYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELV 540
            YDQVV+DV  Q LPVRF I  AGLVG+DG T  G+FDI F++ LP+M+VMA +DE ELV
Sbjct: 404 GYDQVVHDVALQGLPVRFAIDRAGLVGADGATHAGSFDIGFLANLPSMVVMAAADEAELV 463

Query: 541 DMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQ 600
            MVAT A+ DD P+ FRYPRG     ++P    I +EIGK +++ EG  VALL +G  + 
Sbjct: 464 HMVATAAAYDDGPIAFRYPRGEGEGVEMPEEPQI-LEIGKSRMIQEGARVALLSFGTRLG 522

Query: 601 NCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHF 660
              KA   LS  GI  T+ DARF KPLD +++ +L  NH  LIT+EEG++GGFGSHV+  
Sbjct: 523 ETRKAAEALSAKGITPTIVDARFAKPLDREMILDLAANHEALITIEEGAVGGFGSHVAQL 582

Query: 661 IALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
           ++ +G+ D G K+R +VLPD++I+ ASP      A +    I A  L +LG
Sbjct: 583 LSDEGIFDRGFKFRSMVLPDSFIDQASPKDMYEAAAMNAPQIEAKVLEVLG 633


>gi|294084634|ref|YP_003551392.1| deoxyxylulose-5-phosphate synthase [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292664207|gb|ADE39308.1| deoxyxylulose-5-phosphate synthase [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 640

 Score =  544 bits (1402), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 286/634 (45%), Positives = 398/634 (62%), Gaps = 31/634 (4%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           D   TP+LD +     L+ +   +L++LA E+R E    V+KT   L + L  VELTVAL
Sbjct: 3   DDNKTPLLDKISAIKDLRRIPESDLQRLAAELRHETIRAVAKTGGHLGAGLGVVELTVAL 62

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H+VF+ P D+++WDVG Q Y HKILTGRR  I TLR++DG+SG+T R ESE+DPF AGH 
Sbjct: 63  HYVFNTPDDRLIWDVGHQAYPHKILTGRRDRIETLRQRDGLSGFTKRDESEFDPFGAGHS 122

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SAGLGMAVA D++     ++ VI +G   AG AYEAM+NAG  +S +IVILND+  
Sbjct: 123 STSISAGLGMAVASDLQSTPRNVIAVIGDGAMSAGMAYEAMNNAGASESRLIVILNDNDM 182

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+           + A+SS LSR+ +S+ F  +R++ + +T +    +   A +  + AR
Sbjct: 183 SI--------SQPVGAMSSYLSRLITSEPFHSIRDLVREVTSKFPAEIERTARRAKDVAR 234

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---- 370
            +IG   +++F +LG  +IGP+DGH++  L+ +L+ +    + GPVL+HVVTE+      
Sbjct: 235 DLIGV--NSVFSQLGFMHIGPLDGHDVNQLLPILKNLRDTHTNGPVLLHVVTEKGHGHPF 292

Query: 371 RAEDTQKSEAIEK-------QQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVV 423
           + +  +K  A+ K       QQ+ A        GN    Y   F  +L+  AE D  IV 
Sbjct: 293 KDQSHEKYHAVPKFDIITGTQQKSA--------GNVP-NYTSVFANSLIKAAEADSKIVA 343

Query: 424 VHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYD 483
           + A M     L   + KFP R FDVG+AEQHAVTF+AG+A  G+KPFC + S FLQR YD
Sbjct: 344 ITAAMPSGTGLDKLKAKFPSRVFDVGIAEQHAVTFAAGMASEGMKPFCALYSTFLQRGYD 403

Query: 484 QVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMV 543
           Q+++DV  Q LPVRF I  AG+VG+DG T  G +D+ ++SCLPNM++M PSDE EL+ MV
Sbjct: 404 QLIHDVCLQNLPVRFAIDRAGVVGADGATHAGIYDVAYLSCLPNMVIMCPSDEAELIHMV 463

Query: 544 ATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCL 603
           AT  + DD P   RYPRG  V  +LP    I + IGKG+++ EG D+A+L  G  + +CL
Sbjct: 464 ATSVAYDDGPSALRYPRGEGVGCELPDEAEI-LPIGKGRMIREGDDIAILSLGTRLTDCL 522

Query: 604 KARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIAL 663
            A   ++  G++V VADARF KPLD  L+  L  N+  L+ VEE S GGF +HV  ++A 
Sbjct: 523 AAADAMAVQGVNVAVADARFAKPLDTDLLAHLATNYRKLVIVEENSPGGFSAHVMTYLAN 582

Query: 664 DGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGL 697
            GLLD+G++ R + LPD YIEH S   QLALAG+
Sbjct: 583 HGLLDTGLQVRLMTLPDIYIEHDSQAGQLALAGI 616


>gi|381202917|ref|ZP_09910026.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingobium yanoikuyae
           XLDN2-5]
          Length = 640

 Score =  543 bits (1400), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 297/644 (46%), Positives = 393/644 (61%), Gaps = 34/644 (5%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V  P  L+ L   +L QLA E+R+E  + V  T   L S L  VELT A+H+VF
Sbjct: 6   TPLLDTVNIPADLRKLQPDQLHQLADELRAETIAAVGVTGGHLGSGLGVVELTTAIHYVF 65

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P DK++WDVG Q Y HKILTGRR  I TLR+  G+SG+T R+ESEYDPF A H   S+
Sbjct: 66  DTPNDKLVWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTKRAESEYDPFGAAHSSTSI 125

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LG AVA  ++ K    + VI +G   AG AYEAM+NA    + ++VILND+  S+ P
Sbjct: 126 SAALGFAVANKMQDKPGKGIAVIGDGAMSAGMAYEAMNNAREAGNRLVVILNDNDMSIAP 185

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                    +  LS+ L+R+ SS+ F  LR++AK + +++ R +H+ A K DE+ARGM  
Sbjct: 186 --------PVGGLSAYLARLVSSREFLGLRDMAKKLARKLPRPLHKAAKKTDEFARGMA- 236

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR-------- 370
             G TLFEELG YY+GP+DGHN+E LI VL+ V    + GP L+HVVT++ +        
Sbjct: 237 -TGGTLFEELGFYYVGPIDGHNLEHLIPVLENVRD-AAEGPCLIHVVTQKGKGYGPAEAA 294

Query: 371 --RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGM 428
             +    QK + I   Q  A      P G  S  Y + F +AL+ EAE+D  +  + A M
Sbjct: 295 ADKYHGVQKFDVITGTQAKA------PPGPPS--YTNVFAQALIAEAERDPRVCAITAAM 346

Query: 429 EMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVND 488
                L  F+  FP+R FDVG+AEQHAVTF+AGLA  G++PFC I S FLQRAYDQVV+D
Sbjct: 347 PSGTGLDKFELAFPDRIFDVGIAEQHAVTFAAGLAAQGMRPFCAIYSTFLQRAYDQVVHD 406

Query: 489 VDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVAS 548
           V  Q LPVRF I  AGLVG+DG T  G+FD+T+++ LPN +VMA +DE EL  MV T A 
Sbjct: 407 VAIQNLPVRFAIDRAGLVGADGSTHAGSFDVTYLASLPNFVVMAAADEAELTHMVHTCAV 466

Query: 549 IDDRPVCFRYPRGAIVRTDLPGYRGIP--IEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
            D  P+  RYPRG      +P    +P  +EIGKG+V+ EG+ VA+L  G  ++  +KA 
Sbjct: 467 HDSGPIAVRYPRGNGTGVAMP---EVPEALEIGKGRVVREGRQVAILSLGTRLEEAMKAA 523

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGL 666
             L   G+  +V D RF KPLD  L+R +   H   +T+EEGSIGG G+HV    +  GL
Sbjct: 524 DTLEAKGLSASVVDLRFAKPLDEALIRRMLTTHEVAVTIEEGSIGGLGAHVLTLASDLGL 583

Query: 667 LDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
            D+G+K R + LPD + +   P QQ A A L    I  T L+ L
Sbjct: 584 TDNGLKIRTMRLPDIFQDQDKPEQQYADARLDADAIVTTVLTAL 627


>gi|296282072|ref|ZP_06860070.1| 1-deoxy-D-xylulose-5-phosphate synthase [Citromicrobium
           bathyomarinum JL354]
          Length = 643

 Score =  543 bits (1399), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 291/646 (45%), Positives = 394/646 (60%), Gaps = 30/646 (4%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           ++  TP+LD V  P  L+ L   +L+QLA E+R+E+   V  T   L S L  VELTVA+
Sbjct: 6   ERPETPLLDQVNLPADLRKLERGKLRQLADELRTEMIDAVGTTGGHLGSGLGVVELTVAI 65

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H++F+ P D+++WDVG Q Y HKILTGRR  I TLR+  G+SG+T RSESEYDPF A H 
Sbjct: 66  HYIFNTPEDRLIWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTKRSESEYDPFGAAHS 125

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SAG+G A+A  ++ K    + VI +G   AG AYEAM+NA    + ++VILND+  
Sbjct: 126 STSISAGIGFAMANKLQDKPGRAIAVIGDGAMSAGMAYEAMNNAEQAGNRLVVILNDNDM 185

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+ P         +  LS+ L+R+ SS  +  LR +A  + K++ R +H    K +E+ R
Sbjct: 186 SIAP--------PVGGLSAYLARVVSSGEYLGLRSLASKVAKKMHRRIHSSLGKAEEFTR 237

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---- 370
           GM+   G TLFEELG YY+GP+DGHN++ LI VL+ V      GPVL+HVVTE+ +    
Sbjct: 238 GMV--TGGTLFEELGFYYVGPIDGHNLDHLIPVLENVRD-SDQGPVLIHVVTEKGKGYKF 294

Query: 371 --RAED----TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVV 424
             +A D      K + I  +Q+ +S             Y + F E L   AE DK IV +
Sbjct: 295 AEQASDKYHGVSKFDVITGEQKKSSGGPP--------NYQNVFGETLAKLAETDKRIVAI 346

Query: 425 HAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQ 484
            A M     +  F +  PER FDVG+AEQH VTF+AGLA  G++PF  I S FLQRAYDQ
Sbjct: 347 TAAMPSGTGVDKFAKAHPERTFDVGIAEQHGVTFAAGLAAQGMRPFAAIYSTFLQRAYDQ 406

Query: 485 VVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVA 544
           VV+DV  Q LPVRF I  AGLVG+DG T  G+FD+T+++ LPNM+VMA +DE EL  M  
Sbjct: 407 VVHDVAIQNLPVRFAIDRAGLVGADGATHAGSFDVTYLATLPNMVVMAAADEAELAHMTY 466

Query: 545 TVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLK 604
           T A  DD P+ FRYPRGA    ++P  +   +EIGKG+++ EG  VA+L  G  +   L 
Sbjct: 467 TAAEYDDGPIAFRYPRGAGTGVEIP-EKLEKLEIGKGRIVKEGSKVAILSLGTRLGEALD 525

Query: 605 ARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALD 664
           A   L   G+  TVAD RF KPLD  L+ +  ++H  ++T+EE +IGG G+HV  F +  
Sbjct: 526 AAEQLEARGLSTTVADMRFAKPLDTVLIEKAMRDHDVVVTIEEAAIGGLGAHVLTFASDS 585

Query: 665 GLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
           GLLD G+K R + LPD + +   P +Q   AGL   +I  T L+ L
Sbjct: 586 GLLDEGLKVRTMRLPDIFQDQDDPKKQYDEAGLNAANILDTVLAAL 631


>gi|149185145|ref|ZP_01863462.1| 1-deoxy-D-xylulose-5-phosphate synthase [Erythrobacter sp. SD-21]
 gi|148831256|gb|EDL49690.1| 1-deoxy-D-xylulose-5-phosphate synthase [Erythrobacter sp. SD-21]
          Length = 640

 Score =  543 bits (1399), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 290/640 (45%), Positives = 391/640 (61%), Gaps = 26/640 (4%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V+ P  L+ L   +L+QL+ E+R+E+   V  T   L S L  VELT A+H+VF
Sbjct: 7   TPLLDTVDTPADLRKLKQDQLRQLSDELRTEMIDAVGTTGGHLGSGLGVVELTTAIHYVF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P DK++WDVG Q Y HKILTGRR  I TLR+  G+SG+T RSESEYDPF A H   S+
Sbjct: 67  DTPTDKLVWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTKRSESEYDPFGAAHSSTSI 126

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LG A+A  ++G+    + VI +G   AG AYEAM+NA    + ++VILND+  S+ P
Sbjct: 127 SAALGFAMANKMQGRPGRGIAVIGDGAMSAGMAYEAMNNAEQAGNRLVVILNDNDMSIAP 186

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                    +  LS+ L+R  SS  +  LR +A  ++K++ R +H    K +EYARGM+ 
Sbjct: 187 --------PVGGLSAYLARTVSSSEYLGLRSLASRLSKKLSRRVHSSLEKAEEYARGMV- 237

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRR---AEDT 375
             G TLFEELG YY+GP+DGHN++ LI VL+ V      GPVL+HVVT++ +    AE++
Sbjct: 238 -TGGTLFEELGFYYVGPIDGHNLDHLIPVLENVRD-SEQGPVLIHVVTQKGKGYAPAENS 295

Query: 376 -QKSEAIEK----QQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
             K   + K      E    S   P       Y + F E L   A  D  I  + A M  
Sbjct: 296 ADKYHGVAKFDVVTGEQKKSSGGPP------AYQNVFGETLAKLANDDPRICAITAAMPS 349

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              +  F +  P++ FDVG+AEQH VTF+AGLA  G++PF  I S FLQRAYDQVV+DV 
Sbjct: 350 GTGVDKFAQAHPDKAFDVGIAEQHGVTFAAGLAAEGMRPFAAIYSTFLQRAYDQVVHDVA 409

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q LPVRF I  AGLVG+DG T  G+FDIT+++ LPN +VMA +DE EL  M  T A  D
Sbjct: 410 IQNLPVRFAIDRAGLVGADGCTHAGSFDITYLATLPNFVVMAAADEAELAHMTYTAAEYD 469

Query: 551 DRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLS 610
           D P+ FRYPRGA    ++P  +    EIGKG+++ EG  VA+L  GA ++   KA   L 
Sbjct: 470 DGPIAFRYPRGAGTGVEIP-EKLEKFEIGKGRIMREGSKVAILSLGARLEEAKKAADQLE 528

Query: 611 KLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSG 670
             G+  TVAD RF KPLD  L+ ++ ++H  ++T+EEG++GG G+HV  + + +GL D G
Sbjct: 529 AKGLSTTVADMRFAKPLDTALIEQIMRSHEVVVTIEEGAVGGLGAHVLTYASDEGLTDGG 588

Query: 671 VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
           +K R + LPD + +   PT+Q   AGL   HI  T LS L
Sbjct: 589 LKVRTMRLPDAFQDQDDPTKQYDEAGLNAPHIVDTVLSAL 628


>gi|126734148|ref|ZP_01749895.1| 1-deoxy-D-xylulose-5-phosphate synthase, putative [Roseobacter sp.
           CCS2]
 gi|126717014|gb|EBA13878.1| 1-deoxy-D-xylulose-5-phosphate synthase, putative [Roseobacter sp.
           CCS2]
          Length = 640

 Score =  543 bits (1398), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 297/640 (46%), Positives = 394/640 (61%), Gaps = 15/640 (2%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           ++  TP LD +  P  ++ +    +  LA ++R+E+ S VS+T   L SSL  VELT A+
Sbjct: 3   NRPHTPFLDSIAGPADIRRMNDTAIANLADDVRAEVISAVSETGGHLGSSLGVVELTTAI 62

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H VF  P DK+++DVG Q Y HK+LTGRR  I TLR++ G+SG+T R+ESEYDPF A H 
Sbjct: 63  HAVFDTPRDKVVFDVGHQCYPHKVLTGRRDRIRTLRQEGGLSGFTKRAESEYDPFGAAHS 122

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA LG  V RD+       + VI +G+  AG AYEA++NAG     + VILND+  
Sbjct: 123 STSISAALGFTVGRDMGMPTGDAIAVIGDGSISAGMAYEALNNAGAEGRRLFVILNDNEM 182

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+ P +         A+S  LS + +S    +L ++A+G    +   + + A +      
Sbjct: 183 SIAPPV--------GAMSKYLSGLYASP-MGELHKMAEGFEAALPGPLRDHARRARSLVT 233

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRR--- 371
           GM      TLFEELG  Y+GP+DGH++  L+ VL+  A   + GPVL+HV T + +    
Sbjct: 234 GMQTGGSGTLFEELGFSYVGPIDGHDMTQLLPVLR-AARTRATGPVLIHVCTTKGKGYAP 292

Query: 372 AEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMD 431
           AED+        + + A+ + +    N + +Y   F  AL  EA+ D  IV V A M   
Sbjct: 293 AEDSADCGHGVSKFDLATGAQAKSKPN-APSYTKVFGSALTTEAQADPSIVAVTAAMPSG 351

Query: 432 LSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQ 491
             + +   +F +R FDVG+AEQH VTF+AG+A  GLKPFC I S FLQR YDQVV+DV  
Sbjct: 352 TGVDIMGARFKDRVFDVGIAEQHGVTFAAGMAASGLKPFCAIYSTFLQRGYDQVVHDVAL 411

Query: 492 QRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDD 551
           Q LPVRF I  AGLVG+DGPT  GAFDI +MS LPNM+VMA  DE EL+ MV T A+ DD
Sbjct: 412 QNLPVRFAIDRAGLVGADGPTHAGAFDIGYMSALPNMVVMAAGDELELMHMVRTAAAYDD 471

Query: 552 RPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSK 611
            P+ FRYPRG     DLP  RG  IEIGKG+++ EG DVA+L +GA +  C KA   L+ 
Sbjct: 472 GPIAFRYPRGEGEGIDLP-ERGELIEIGKGRIVQEGSDVAILSFGAHLAECRKAAEKLAA 530

Query: 612 LGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGV 671
            G+  T+ADARF KPLD  L+R+L +NH  LITVE+GS GGFG+ V H +A DGLLD   
Sbjct: 531 QGVSTTIADARFAKPLDRALIRQLLRNHKALITVEQGSRGGFGAMVLHDLANDGLLDGCC 590

Query: 672 KWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
           + R + LPD YI+HASP    A AGLT   +AATA+   G
Sbjct: 591 QVRTMTLPDRYIDHASPDAMYADAGLTAVDVAATAMQAAG 630


>gi|84515019|ref|ZP_01002382.1| deoxyxylulose-5-phosphate synthase [Loktanella vestfoldensis SKA53]
 gi|84511178|gb|EAQ07632.1| deoxyxylulose-5-phosphate synthase [Loktanella vestfoldensis SKA53]
          Length = 644

 Score =  543 bits (1398), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 294/638 (46%), Positives = 395/638 (61%), Gaps = 19/638 (2%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           ++  TP LD +  P  L+ + +  L  LA ++R+E+ S VS+T   L SSL  VELTVA+
Sbjct: 3   NRPSTPFLDSIAGPADLRRMNMTALANLADDLRAEVISAVSETGGHLGSSLGVVELTVAI 62

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H VF  P DK+++DVG Q Y HK+LTGRR  I TLR++ G+SG+T RSESEYDPF A H 
Sbjct: 63  HAVFDTPRDKLIFDVGHQCYPHKVLTGRRDRIRTLRQEGGLSGFTKRSESEYDPFGAAHS 122

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA LG  V RD+       + VI +G+  AG AYEAM+NAG     + VILND+  
Sbjct: 123 STSISAALGFTVGRDLGMPTGDAIAVIGDGSISAGMAYEAMNNAGSEGRRLFVILNDNEM 182

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+ P +         A+S  LS + +S     L ++A+G    +   + + A +  +   
Sbjct: 183 SIAPPV--------GAMSKYLSGLYASP-LGDLHKMAEGFESVLPGPIRDHARRARQLVT 233

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---- 370
           GM      TLFE LG  YIGP+DGH++  L+ VL+  A   + GPVL+HV T++ +    
Sbjct: 234 GMQSGNTGTLFESLGFSYIGPIDGHDMSQLLPVLR-AAKTRATGPVLIHVCTKKGKGYAP 292

Query: 371 RAEDTQKSEAIEKQQEGASD-SNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGME 429
             +   K   + K    + + + S P    + +Y   F  AL +EA+ D  IV V A M 
Sbjct: 293 AEQSADKYHGVAKFNVASGEQAKSRP---NAPSYTKIFGTALTVEAQHDPRIVAVTAAMP 349

Query: 430 MDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDV 489
               + +  ++F  R FDVGMAEQH VTF+AG+A  GLKPFC I S FLQR YDQ+V+DV
Sbjct: 350 NGTGVDIMGQRFGSRVFDVGMAEQHGVTFAAGMAASGLKPFCAIYSTFLQRGYDQIVHDV 409

Query: 490 DQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASI 549
             Q LPVRF I  AGLVG+DGPT  G+FDI +++ LPNM+VMA  DE EL+ MV T A+ 
Sbjct: 410 ALQNLPVRFAIDRAGLVGADGPTHAGSFDIGYLAALPNMVVMAAGDELELMHMVRTAAAY 469

Query: 550 DDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALL 609
           D+ P+ FRYPRG  V  DLP  RG  IEIGKG+++ +G DVA+L +GA +  C KA   L
Sbjct: 470 DEGPIAFRYPRGEGVGLDLP-ERGEIIEIGKGRIVQQGSDVAILSFGAHLDECRKAARAL 528

Query: 610 SKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDS 669
              G+ VT+ADARF KPLD  L+R+L ++H  L+TVE+G+ GGFG+ V H +A DGLLD 
Sbjct: 529 ETQGVSVTIADARFAKPLDRALIRQLLRHHKALVTVEQGAQGGFGAMVLHDLANDGLLDG 588

Query: 670 GVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATAL 707
             + R + LPD YI+HA+P    A AGLT   IAATA+
Sbjct: 589 RCQVRTMTLPDRYIDHAAPDVMYAEAGLTAVDIAATAM 626


>gi|91762254|ref|ZP_01264219.1| 1-deoxy-D-xylulose-5-phosphate synthase [Candidatus Pelagibacter
           ubique HTCC1002]
 gi|91718056|gb|EAS84706.1| 1-deoxy-D-xylulose-5-phosphate synthase [Candidatus Pelagibacter
           ubique HTCC1002]
          Length = 637

 Score =  542 bits (1396), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 283/635 (44%), Positives = 391/635 (61%), Gaps = 20/635 (3%)

Query: 88  PLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDKILW 147
           P  L+ L+  +L++++ E+R E+   VS+T   L + L  VELTVALH+VF  P D+++W
Sbjct: 13  PSDLRKLSENDLQEVSNEVRKEMIDAVSETGGHLGAGLGVVELTVALHYVFDTPNDRLIW 72

Query: 148 DVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVA 207
           DVG QTY HKILTGR+S I TLR+ +G+SG+T RSESEYDPF A H   S+S+ LGMA A
Sbjct: 73  DVGHQTYPHKILTGRKSKIKTLRQGNGLSGFTKRSESEYDPFGAAHSSTSISSALGMAEA 132

Query: 208 RDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKIEESPKTS 267
             +  K   I+ VI +G   AG AYEAM+NAG   + MIVILND+  S+           
Sbjct: 133 NKLSNKSSNIIAVIGDGAISAGMAYEAMNNAGASKTKMIVILNDNDMSI--------AKP 184

Query: 268 INALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEE 327
           + A+ + L+++ + K +  LRE  K +     +     A K +++ R  +   G TLF  
Sbjct: 185 VGAMRTYLAKLLTGKIYFSLRETFKLIVSAFSKRFSAKAGKAEDFLRSAV--TGGTLFNS 242

Query: 328 LGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSEAIEKQQEG 387
           LG YY+GP+DGH++  LI +L+        GP+++H+ T++ +     +K+        G
Sbjct: 243 LGFYYVGPIDGHDLSTLIPILKNARDSKHQGPIMIHIKTQKGKGYSYAEKAS---DHYHG 299

Query: 388 ASDSN-----SLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFP 442
            S  N      +  G     Y   F   LV  AE+D  +V V A M     + +F + FP
Sbjct: 300 VSKFNVVTGEQVKSGTNLPAYTKVFANTLVKHAERDSKVVGVTAAMPGGTGMDIFAKDFP 359

Query: 443 ERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITS 502
           +R FDVG+AEQHAVTF+AGLA  G KP+  I S FLQRAYDQVV+DV  Q LPVRF+I  
Sbjct: 360 KRMFDVGIAEQHAVTFAAGLATEGYKPYVAIYSTFLQRAYDQVVHDVAIQSLPVRFIIDR 419

Query: 503 AGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYPRGA 562
           AGLVG+DG T  G+FDIT++S LPN IVMAPSDE ELV M+ T  SI+++P   RYPRG 
Sbjct: 420 AGLVGADGSTHAGSFDITYLSTLPNFIVMAPSDEAELVKMINTSMSINNKPCAIRYPRGN 479

Query: 563 IVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADAR 622
            +  +LP      IEIGKG+V+ EGK V +L  G  ++ C  A A L   GI+ T+ DAR
Sbjct: 480 GIGVELPSIDE-NIEIGKGRVIQEGKQVCILSIGTRLEECKIAAAELKNKGIESTIVDAR 538

Query: 623 FCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNY 682
           F KPLD +L+ +  + H  +ITVEEGSIGGFGSHV + ++  G+ D G+K+R ++LPD +
Sbjct: 539 FAKPLDQELILKCAREHEVMITVEEGSIGGFGSHVENLLSEKGIFDKGLKFRTMILPDIF 598

Query: 683 IEHASPTQQLALAGLTGHHIAATALSLLGRTREAL 717
           IE  SP +   +AGL    I+   L +L  T+E++
Sbjct: 599 IEQDSPKKMYDVAGLNASQISKKILDIL-FTKESI 632


>gi|224177807|gb|ACN38875.1| chloroplast 1-deoxy-D-xylulose 5-phosphate synthase [Linum
           usitatissimum]
          Length = 443

 Score =  542 bits (1396), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 275/447 (61%), Positives = 336/447 (75%), Gaps = 12/447 (2%)

Query: 236 SNAGYLDSNMIVILNDSRHSLHPKIE-ESPKTSINALSSTLSRIQSSKSFRQLREVAKGM 294
           +NAGYLDS+MIVILND++    P    + P   + ALSS LSR+QS++  R+LREVAKG+
Sbjct: 1   NNAGYLDSDMIVILNDNKQVSLPTANLDGPIPPVGALSSALSRLQSNRPLRELREVAKGV 60

Query: 295 TKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASL 354
           TK+IG  MHE AAKVDEYARGMI   GSTLFEELGLYYIGPVDGH+I+D++++L+EV S 
Sbjct: 61  TKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHSIDDIVAILKEVKST 120

Query: 355 GSMGPVLVHVVTEENR------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFI 408
            + GPVL+HVVTE+ R      +A D     A      G    +S P    +++Y   F 
Sbjct: 121 KATGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGQQFKSSAP----TQSYTTYFA 176

Query: 409 EALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLK 468
           EAL+ EAE DKD+V +HA M     L  F  +FP R FDVG+AEQHAVTF+AGLAC GLK
Sbjct: 177 EALIAEAEADKDVVAIHAAMGGGTGLNQFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLK 236

Query: 469 PFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNM 528
           PFC I S+FLQRAYDQVV+DVD Q+LPVRF +  AGLVG+DGPT CGAFD+TFM+CLPNM
Sbjct: 237 PFCAIYSSFLQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMACLPNM 296

Query: 529 IVMAPSDEDELVDMVATVASIDDRPVCFRYPRGAIVRTDL-PGYRGIPIEIGKGKVLVEG 587
           +VMAPSDE EL  MVAT A+IDDRP CFRYPRG  +  +L PG +G+P+E+G+G++L+EG
Sbjct: 297 VVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGLGVELPPGNKGVPLEVGQGRILIEG 356

Query: 588 KDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEE 647
           + VALLGYGA VQ+CL A +L+   G+ VTVADARFCKPLD  L+R L + H  LITVEE
Sbjct: 357 ERVALLGYGAAVQSCLAAASLVEPHGLKVTVADARFCKPLDQALIRSLAKTHEVLITVEE 416

Query: 648 GSIGGFGSHVSHFIALDGLLDSGVKWR 674
           GSIGGFGSHV  F+ALDGLLD  +KWR
Sbjct: 417 GSIGGFGSHVVQFLALDGLLDGKLKWR 443


>gi|427411739|ref|ZP_18901941.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingobium yanoikuyae
           ATCC 51230]
 gi|425710029|gb|EKU73052.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingobium yanoikuyae
           ATCC 51230]
          Length = 639

 Score =  542 bits (1396), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 295/642 (45%), Positives = 392/642 (61%), Gaps = 30/642 (4%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V+ P  L+ L   +L+QLA E+R+E  + V  T   L S L  VELT A+H+VF
Sbjct: 6   TPLLDTVKIPADLRKLQPDQLRQLADELRAETIAAVGVTGGHLGSGLGVVELTTAIHYVF 65

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P DK++WDVG Q Y HKILTGRR  I TLR+  G+SG+T R+ESEYDPF A H   S+
Sbjct: 66  DTPNDKLVWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTKRAESEYDPFGAAHSSTSI 125

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LG AVA  ++ K    + VI +G   AG AYEAM+NA    + ++VILND+  S+ P
Sbjct: 126 SAALGFAVANKMQDKPGKGIAVIGDGAMSAGMAYEAMNNAREAGNRLVVILNDNDMSIAP 185

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                    +  LS+ L+R+ SS+ F  LR++AK + +++ R +H+ A K DE+ARGM  
Sbjct: 186 --------PVGGLSAYLARLVSSREFLGLRDMAKKLARKLPRPLHKAAKKTDEFARGMA- 236

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR-------- 370
             G TLFEELG YY+GP+DGHN+E LI VL+ V    + GP L+HVVT++ +        
Sbjct: 237 -TGGTLFEELGFYYVGPIDGHNLEHLIPVLENVRD-AAEGPCLIHVVTQKGKGYGPAEAA 294

Query: 371 --RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGM 428
             +    QK + I   Q  A      P G  S  Y + F +AL+ EA++D  +  + A M
Sbjct: 295 ADKYHGVQKFDVITGTQAKA------PPGPPS--YTNVFAQALIAEAQRDPRVCAITAAM 346

Query: 429 EMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVND 488
                L  F+  FP+R FDVG+AEQHAVTF+AGLA  G++PFC I S FLQRAYDQVV+D
Sbjct: 347 PSGTGLDKFELAFPDRTFDVGIAEQHAVTFAAGLAAQGMRPFCAIYSTFLQRAYDQVVHD 406

Query: 489 VDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVAS 548
           V  Q LPVRF I  AGLVG+DG T  G+FD+T+++ LPN +VMA +DE EL  MV T A 
Sbjct: 407 VAIQNLPVRFAIDRAGLVGADGSTHAGSFDVTYLASLPNFVVMAAADEAELTHMVHTCAV 466

Query: 549 IDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARAL 608
            D  P+  RYPRG      +P      +EIGKG+V+ EG+ VA+L  G  ++  +KA   
Sbjct: 467 HDSGPIAVRYPRGNGTGVAMPEV-AEALEIGKGRVVREGRQVAILSLGTRLEEAMKAADT 525

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLD 668
           L   G+  +V D RF KPLD  L+R +   H   +T+EEGSIGG G+HV    +  GL D
Sbjct: 526 LEAKGLSASVVDLRFAKPLDEALIRRMLTTHEVAVTIEEGSIGGLGAHVLTLASDLGLTD 585

Query: 669 SGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
            G+K R + LPD + +   P QQ A A L    I  T L+ L
Sbjct: 586 HGLKIRTMRLPDIFQDQDKPEQQYADARLDADAIVDTVLTAL 627


>gi|85703516|ref|ZP_01034620.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseovarius sp. 217]
 gi|85672444|gb|EAQ27301.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseovarius sp. 217]
          Length = 661

 Score =  541 bits (1394), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 298/637 (46%), Positives = 393/637 (61%), Gaps = 26/637 (4%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           D+  TP+LD V  P  L+ +  ++L  LA E+R+E+ S VS+T   L SSL  VEL VA+
Sbjct: 23  DRPNTPLLDRVAGPSDLRQMPDEKLALLADELRAEVISAVSETGGHLGSSLGVVELAVAI 82

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H VF+ P+DK++WDVG Q Y HKILTGRR  I TLR+KDG+SG+T RSES YDPF A H 
Sbjct: 83  HAVFNTPIDKLVWDVGHQCYPHKILTGRRDRIRTLRQKDGLSGFTKRSESIYDPFGAAHS 142

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA LG AVARD+       + VI +G+  AG AYEA++NAG     + VILND+  
Sbjct: 143 STSISAALGFAVARDMGQATGDAIAVIGDGSISAGMAYEALNNAGAEGRRLFVILNDNEM 202

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+ P         + A+SS LSR+ +S+   ++  +A+G    +   + E A +  +   
Sbjct: 203 SIAPP--------VGAMSSYLSRMYASEPLARMASLAEGFEAALPAPLRESAKRARQLVT 254

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAED 374
           G+ G    TLFEELG  Y+GP+DGH++  L+SVL+  A   + GPVL+H  T + +    
Sbjct: 255 GLTG--SGTLFEELGFQYVGPIDGHDMGQLLSVLR-AARTRATGPVLIHCCTVKGK---G 308

Query: 375 TQKSEAIEKQQEGAS--------DSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHA 426
              +E    +  G S         + S P    + +Y   F +AL  EA +D  IV V A
Sbjct: 309 YAPAEGAADRGHGVSKFDPATGAQAKSKP---GAPSYTGVFGQALTDEAARDDRIVAVTA 365

Query: 427 GMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVV 486
            M     L    E+FP R FDVG+AEQHAVTF+AG+A  GLKPFC I S FLQRAYDQVV
Sbjct: 366 AMPDGTGLTKMAERFPARVFDVGIAEQHAVTFAAGMAASGLKPFCAIYSTFLQRAYDQVV 425

Query: 487 NDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATV 546
           +DV  Q LPVRF I  AGLVG+DG T  GAFDI ++  LP M +MA +DE ELV MVAT 
Sbjct: 426 HDVALQGLPVRFAIDRAGLVGADGATHAGAFDIGYLGNLPGMTLMAAADEAELVHMVATA 485

Query: 547 ASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
           A+ D  P+ FRYPRG+     LP  RG P+ IGKG+++ EG DVA+L +GA +  C  A 
Sbjct: 486 AAHDAGPIAFRYPRGSGTGVALP-ERGKPLAIGKGRIIEEGTDVAILSFGAHLFECQVAA 544

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGL 666
            +++  GI VTVADARF KPLD  L+ +L  +H  LITVE+G++GGFGS V H +A  G 
Sbjct: 545 DMVADDGISVTVADARFAKPLDTDLLMQLVSHHRALITVEQGAMGGFGSMVMHELARRGA 604

Query: 667 LDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIA 703
            D G+  R + LPD +I+ A+P      AGL+   IA
Sbjct: 605 FDKGLILRTLCLPDRFIDQANPEDMYVDAGLSAPQIA 641


>gi|85375331|ref|YP_459393.1| 1-deoxy-D-xylulose-5-phosphate synthase [Erythrobacter litoralis
           HTCC2594]
 gi|123099471|sp|Q2N6U5.1|DXS_ERYLH RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|84788414|gb|ABC64596.1| 1-D-deoxyxylulose 5-phosphate synthase [Erythrobacter litoralis
           HTCC2594]
          Length = 640

 Score =  541 bits (1394), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 292/642 (45%), Positives = 390/642 (60%), Gaps = 30/642 (4%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V  P  L+ L   +L+QL+ E+R+E+ S V  T   L S L  VELT A+H+VF
Sbjct: 7   TPLLDTVSYPEDLRKLEPGQLRQLSDELRAEMISAVGVTGGHLGSGLGVVELTAAIHYVF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+++WDVG Q Y HKILTGRR  I TLR+  G+SG+T RSESEYDPF A H   S+
Sbjct: 67  NTPEDRLIWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTKRSESEYDPFGAAHSSTSI 126

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLG AVA  +KG+    + VI +G   AG AYEAM+NA    + +IVILND+  S+ P
Sbjct: 127 SAGLGFAVANKLKGEPGKAIAVIGDGAMSAGMAYEAMNNAEQAGNRLIVILNDNDMSIAP 186

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                    +  LS  L+R+ SS  +  LR +A  MT ++ R +H    K +EY +G++ 
Sbjct: 187 --------PVGGLSGYLARLMSSSEYLGLRSLASRMTAKVSRRVHTSLGKAEEYTKGLV- 237

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRR---AEDT 375
             G TLFEELG YY+GP+DGHN++ LI VL+ V      GP L+HV T + +    AE++
Sbjct: 238 -TGGTLFEELGFYYVGPIDGHNLDHLIPVLENVRD-AEEGPFLIHVRTVKGKGYAPAENS 295

Query: 376 -QKSEAIEK----QQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
             K   + K      E    +   P       Y + F E L   A+ D  I  + A M  
Sbjct: 296 ADKYHGVAKFDVVTGEQKKSTGGPP------AYQNVFGETLAKLADSDPRICAITAAMPS 349

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              +  F +  P+R FDVG+AEQH VTF+AGLA  G++PF  I S FLQRAYDQVV+DV 
Sbjct: 350 GTGVDKFAKAHPDRAFDVGIAEQHGVTFAAGLAAQGMRPFAAIYSTFLQRAYDQVVHDVA 409

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q LPVRF I  AGLVG+DG T  G+FD+T+++ LPN +VMA +DE ELV M  T A  D
Sbjct: 410 IQNLPVRFAIDRAGLVGADGSTHAGSFDVTYLATLPNFVVMAAADEAELVHMTYTAAEHD 469

Query: 551 DRPVCFRYPRGAIVRTDLPGYRGIP--IEIGKGKVLVEGKDVALLGYGAMVQNCLKARAL 608
             P+ FRYPRG  +  DLP     P  +EIGKG+++  G  VALL  G  ++   +A   
Sbjct: 470 SGPIAFRYPRGGGIGIDLP---ETPEKLEIGKGRIVKHGSKVALLSLGTRLEEAKRAADE 526

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLD 668
           L   G+  T+AD RF KPLD +L+ +L +NH  ++T+EE SIGG G+HV  + + +GL D
Sbjct: 527 LEAKGLSTTIADMRFAKPLDTELIAQLMKNHEVVVTIEEASIGGLGAHVLTYASDEGLTD 586

Query: 669 SGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
           +G+K R + LPD +IE  +P +Q   AGLT  HI  T L  L
Sbjct: 587 AGLKIRTMRLPDAFIEQDAPEKQYDEAGLTAPHIVDTVLKAL 628


>gi|323447373|gb|EGB03297.1| hypothetical protein AURANDRAFT_59650 [Aureococcus anophagefferens]
          Length = 660

 Score =  541 bits (1393), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 302/660 (45%), Positives = 408/660 (61%), Gaps = 40/660 (6%)

Query: 91  LKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDKILWDVG 150
           +K  +I ELKQLA E+R ++   VSKT   L SSL  VELT ALH+VF AP D+I+WDV 
Sbjct: 1   MKKFSIAELKQLAHELRWDVIRAVSKTGGHLSSSLGVVELTTALHYVFDAPEDRIMWDVS 60

Query: 151 EQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDI 210
            Q Y HKILTGRRS + TLR++DG+SG+  R+ESEYD F AGH   S+SA LGM+V +  
Sbjct: 61  HQCYPHKILTGRRSRMGTLRQQDGLSGFQKRAESEYDAFGAGHSSTSISAALGMSVGKSQ 120

Query: 211 KGKRE--CIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKIEESPKTSI 268
           KG+ +  CI  VI +G    G A+EAM+NA YL + MI +LND+     P    S    I
Sbjct: 121 KGRAQNNCI-AVIGDGAITGGMAFEAMNNANYLQARMITVLNDNGQVSLPTGTPSAGGVI 179

Query: 269 --NALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFE 326
              ALS+  SR+ SSK F   R+VAKG++      +    AK+DEYARG++   G TLFE
Sbjct: 180 PSGALSAYTSRLISSKPFADFRQVAKGISSLFPSEIQAINAKIDEYARGIV--TGGTLFE 237

Query: 327 ELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR------RAEDTQKSEA 380
           ELG YYIGPVDGH++E+L+ +L+ +    S  PVL+H+ TE+        +A D     A
Sbjct: 238 ELGFYYIGPVDGHDLENLVPILENLRDTPSNKPVLLHIKTEKGYGYAPAMQASDKMHGVA 297

Query: 381 ---IEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLF 437
              +   ++      +        +    F   L   AEKD+D++ + A M     + +F
Sbjct: 298 KFDVATGKQFKGAPPAPGAPPKPASLTTIFANELCRLAEKDRDVIGITAAMPGGTGMDIF 357

Query: 438 QEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVR 497
             +FP+R +DVG+AEQHAVTF+AGLA  GLKPFC I S F+QR YDQ+V+DV  Q LPVR
Sbjct: 358 GRRFPKRTYDVGIAEQHAVTFAAGLAVEGLKPFCCIYSTFMQRGYDQLVHDVVIQDLPVR 417

Query: 498 FVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFR 557
           F++  AGLVG+DGPT  G+FD+T++ C+P +++MAP++E +L +M+AT  +IDD+P C R
Sbjct: 418 FILDRAGLVGNDGPTHHGSFDLTYLGCMPGLVIMAPAEEVDLRNMIATAYAIDDKPSCVR 477

Query: 558 YPRGA------------IVRTDLPGYRGIPIEIGKGKVLVEG--------KDVALLGYGA 597
           YPRG             +  T++P   G  + +GKG+++ +G        K VA+L  G 
Sbjct: 478 YPRGTGYGLEKLNDLFDLGLTEVP-EAGEVLPVGKGRIIKDGVKGRPGANKKVAILSLGT 536

Query: 598 MVQNCLKARALLSKLGID--VTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGS 655
            +    +A   L     D  VTVADARF KPLDI LVR+L + +  LIT+EE S+ GFG 
Sbjct: 537 RLAAAAEAAKELEGEYDDVAVTVADARFMKPLDIDLVRKLAKENDVLITIEENSVLGFGD 596

Query: 656 HVSHFIALDGLLDSG-VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTR 714
           +V HF+ALDG LD G +K RP+VLPD +IE A+  QQ   AGL   HI  TA  LL R +
Sbjct: 597 YVLHFLALDGALDDGNLKVRPMVLPDAFIETATQFQQYEAAGLNAKHIVGTAAKLLDRAK 656


>gi|114326885|ref|YP_744042.1| 1-deoxy-D-xylulose-5-phosphate synthase [Granulibacter bethesdensis
           CGDNIH1]
 gi|114315059|gb|ABI61119.1| 1-deoxy-D-xylulose 5-phosphate synthase [Granulibacter bethesdensis
           CGDNIH1]
          Length = 674

 Score =  540 bits (1392), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 305/673 (45%), Positives = 412/673 (61%), Gaps = 46/673 (6%)

Query: 71  DFFWDKEP-----TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSL 125
           DF  +  P     TP LD V  P  L++++ ++L+ +A E+R+E    VS T   L ++L
Sbjct: 5   DFMTETTPVRCHETPTLDRVRYPSDLRNMSSEQLRAVADELRAETVDAVSVTGGHLGAAL 64

Query: 126 AAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESE 185
             +ELTVA+H VF  P D+++WDVG Q Y HKILTGRR  I TLR   G+SG+T RSESE
Sbjct: 65  GVIELTVAIHAVFDTPSDRLIWDVGHQAYPHKILTGRRDRIRTLRMGGGLSGFTKRSESE 124

Query: 186 YDPFNAGHGCNSVSAGLGMAVARDIK-------GKRECIVTVISNGTTMAGQAYEAMSNA 238
           YDPF AGH   S+SAGLGMAVARD++          E ++ VI +G   AG  YEAM+NA
Sbjct: 125 YDPFGAGHSSTSISAGLGMAVARDLRRAAGEVGAGPEHVIAVIGDGAMSAGMVYEAMNNA 184

Query: 239 GYLDSNMIVILNDSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRI 298
           G L S ++VILND+  S+ P +         A+S+ LSR+ SS+SF  LR++A  M +  
Sbjct: 185 GSLKSRLVVILNDNDMSIAPPV--------GAMSAYLSRLLSSRSFLNLRDLAGKMARHF 236

Query: 299 GRGMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMG 358
            RG+   A + +EYARG++   G TLFEELG YY+GP+DGHN++ L+ VL+ V      G
Sbjct: 237 PRGIERTARRAEEYARGIL--TGGTLFEELGFYYVGPIDGHNLDHLLPVLRNVRDAEETG 294

Query: 359 PVLVHVVTEENRRAEDTQKSEAIEKQQEGASDSN----------SLPFGNYSR-TYDDCF 407
           P+LVH +T   R+      +EA   +    S  N           +P    +  TY   F
Sbjct: 295 PILVHAIT---RKGHGYAPAEASADKYHAVSRFNVVTGEQIKPAPVPGAKPAPPTYTKVF 351

Query: 408 IEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGL 467
            EAL+  AE++  +V ++A M     L  F+++FP+R FDVG+AEQHAVTF+AGLA  G+
Sbjct: 352 AEALIAAAEENPRVVAINAAMPSGTGLDAFEKRFPDRCFDVGIAEQHAVTFAAGLAVEGM 411

Query: 468 KPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPN 527
            PFC + S FLQR YDQ+V+DV  Q LPVRF I  AGLVG+DG T  G+FD+ ++ CLP 
Sbjct: 412 VPFCALYSTFLQRGYDQLVHDVAIQHLPVRFAIDRAGLVGADGATHAGSFDMAYLGCLPG 471

Query: 528 MIVMAPSDEDELVDMVATVASIDDRPVCFRYPRGAIVRTDLP-----GYRGIPIEIGKGK 582
           M++M+PSDE ELV  VATVA+ D  P   RYPRG  V   LP       RG  + IG+G+
Sbjct: 472 MMIMSPSDEAELVHAVATVAAYDSGPSAVRYPRGEGVGVALPRDEKGRLRGDVLPIGRGR 531

Query: 583 VLVEGKD-VALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTF 641
           ++ EG+  +A+L  G  +Q+ L A   L+  G+ VTVAD RF KPLD  LV  L + +  
Sbjct: 532 IVREGRSGIAILSIGTRLQDALLAADDLAAHGLTVTVADGRFVKPLDTALVERLARENDV 591

Query: 642 LITVEEGSIGGFGSHVSHFIALDGLLDS----GVKWRPIVLPDNYIEHASPTQQLALAGL 697
           L+ VEEGSIGG+ SHV   +A  GLLD+     +K R ++LPD YI+H +   Q+  AGL
Sbjct: 592 LVVVEEGSIGGYASHVMQHLAQAGLLDARDGHALKLRSMILPDRYIDHDTQPNQIRQAGL 651

Query: 698 TGHHIAATALSLL 710
               I  T L L+
Sbjct: 652 DHQAIRDTVLKLV 664


>gi|85709905|ref|ZP_01040970.1| 1-deoxy-D-xylulose-5-phosphate synthase [Erythrobacter sp. NAP1]
 gi|85688615|gb|EAQ28619.1| 1-deoxy-D-xylulose-5-phosphate synthase [Erythrobacter sp. NAP1]
          Length = 641

 Score =  540 bits (1390), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 290/643 (45%), Positives = 394/643 (61%), Gaps = 32/643 (4%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD +  P  L+ L  ++L+QLA E+R+E+   VS +   L S L  VELTVA+H+VF
Sbjct: 7   TPLLDTIPTPDELRKLKPEQLRQLADELRAEMIDAVSVSGGHLGSGLGVVELTVAIHYVF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P DK++WDVG Q Y HKI+TGRR  I T+R+  G+SG+T R+ESEYDPF A H   S+
Sbjct: 67  NTPDDKLIWDVGHQCYPHKIITGRRDRIRTIRQGGGLSGFTKRAESEYDPFGAAHSSTSI 126

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LG A+A  +  K    + VI +G   AG AYEAM+NA    + ++VILND+  S+ P
Sbjct: 127 SAALGFAIANKLNDKPGRGIAVIGDGAMSAGMAYEAMNNAAQAGNRLVVILNDNDMSIAP 186

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                    +  LS+ L+R+ SS  +  LR +A    K++ R +H+   K +EY+RGM+ 
Sbjct: 187 --------PVGGLSAYLARMVSSSEYLGLRSLASKAVKKMSRRLHDALGKAEEYSRGMV- 237

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G TLFEELG YY+GP+DGHN++ LI VL+ V    S GPVL+HVVTE         K 
Sbjct: 238 -TGGTLFEELGFYYVGPIDGHNLDHLIPVLENVRDT-SEGPVLIHVVTE---------KG 286

Query: 379 EAIEKQQEGASDSNSLPFGNY-----------SRTYDDCFIEALVMEAEKDKDIVVVHAG 427
           +  +  +E A   + +P  N            +  Y + F + L   A+ DK I  + A 
Sbjct: 287 KGYKPAEESADKYHGVPKFNVVTGEKQKGSAGAPAYQNVFGDTLADLADTDKRICAITAA 346

Query: 428 MEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVN 487
           M     +  F ++ P+R FDVG+AEQH VTF+AGLA  G++PF  I S FLQRAYDQVV+
Sbjct: 347 MPSGTGVDRFAQRHPDRSFDVGIAEQHGVTFAAGLAAQGMRPFAAIYSTFLQRAYDQVVH 406

Query: 488 DVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVA 547
           DV  Q LPVRF I  AGLVG+DG T  G+FDIT+++ LPNM+VMA +DE ELV M  T  
Sbjct: 407 DVAIQNLPVRFAIDRAGLVGADGCTHAGSFDITYLATLPNMVVMAAADEAELVHMTYTAV 466

Query: 548 SIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARA 607
             D+ P+ FRYPRG+ V   LP      +EIGKG+++ EG  VA+L  GA ++   KA  
Sbjct: 467 EYDEGPIAFRYPRGSGVGVPLP-ETPQKLEIGKGRLVREGSKVAILSLGARLEEAKKAAD 525

Query: 608 LLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLL 667
            L   G+  TVAD RF KPLD  L+  L + H  ++T+EEG+IGG G+HV  +   +GL 
Sbjct: 526 QLEAKGLSTTVADMRFAKPLDEDLIARLMRTHEVVVTIEEGAIGGLGAHVLTYATDEGLT 585

Query: 668 DSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
           D+G+K R + LPD + +  SP +Q   AGL+  HI  T L  L
Sbjct: 586 DNGLKVRTMRLPDTFQDQDSPDKQYEEAGLSAPHIVDTVLKAL 628


>gi|254561124|ref|YP_003068219.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacterium
           extorquens DM4]
 gi|254268402|emb|CAX24359.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein,
           thiamin-binding [Methylobacterium extorquens DM4]
          Length = 660

 Score =  540 bits (1390), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 307/648 (47%), Positives = 404/648 (62%), Gaps = 43/648 (6%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           T IL+ +E P RL+ L   EL+++A  +R+E+   VS T   L S L  VELTVALHHVF
Sbjct: 9   TTILEGLETPDRLRLLPESELQRVADAVRAEMIDAVSITGGHLGSGLGVVELTVALHHVF 68

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+I+WDVG Q Y HKILTGRR  I TLR+  G+SG+T RSESEYDPF A H   S+
Sbjct: 69  DTPDDRIVWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTKRSESEYDPFGAAHSSTSI 128

Query: 199 SAGLGMAVARDI-------KG----KRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIV 247
           SA LGMAVARD+       KG    KR  ++ VI +G+  AG AYEAM+NAG L S +IV
Sbjct: 129 SAALGMAVARDLEEADAKAKGGPAPKRRNMIAVIGDGSMSAGMAYEAMNNAGALHSRLIV 188

Query: 248 ILNDSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAA 307
           ILND+  S+ P         + A+S+ L+R+ S  ++R LRE AK + K + + +++ AA
Sbjct: 189 ILNDNDMSIAP--------PVGAMSAYLARLASGGTYRSLRETAKQLGKLLPKALYQRAA 240

Query: 308 KVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTE 367
             +EYAR +I   G T+FEE+G +Y+GPVDGHN++ L+ VL+ V      GP+L+HVVT+
Sbjct: 241 AAEEYARSLI-VGGGTMFEEMGFHYVGPVDGHNLDHLLPVLKNVRD-SDQGPILLHVVTQ 298

Query: 368 ENR----------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEK 417
           + +          R     K + +   Q  A  +        +  Y   F E+L+  A+ 
Sbjct: 299 KGKGYAPAEASADRYHGVVKFDVVSGVQAKAKAN--------APAYTRVFGESLIKAADA 350

Query: 418 DKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAF 477
           D  +V + A M     + LF +  P+R FDVG+AEQHAVTF+ GLA  G KPF  I S F
Sbjct: 351 DPKVVAITAAMPGGTGIDLFGKAHPDRTFDVGIAEQHAVTFAGGLATEGYKPFVAIYSTF 410

Query: 478 LQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDED 537
           LQRAYDQVV+DV  Q LPVRF +  AGLVG+DG T  GAFD+ ++ CLPNM VMA SDE 
Sbjct: 411 LQRAYDQVVHDVALQNLPVRFCLDRAGLVGADGATHAGAFDLAYLCCLPNMTVMAASDEA 470

Query: 538 ELVDMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVL--VEGKDVALLGY 595
           ELV MVAT  + D  P+  RYPRG  V  +LP   G+P+ IG+G+V+   EG  VALL  
Sbjct: 471 ELVHMVATCHAHDSGPIALRYPRGEGVGIELP-ETGVPLAIGRGRVVRRPEGARVALLSL 529

Query: 596 GAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGS 655
           G  +   LKA   L   G+  TVADARF KPLD +L+ +L  +H  L+TVEEGS+GGFG+
Sbjct: 530 GTRLSEALKAADALEAEGVAATVADARFAKPLDAELIVDLAMSHEVLVTVEEGSVGGFGA 589

Query: 656 HVSHFIALDGLLDSG-VKWRPIVLPDNYIEHASPTQQLALAGLTGHHI 702
            V H +A  G+LD+G V+ R + LPD+Y +H  P +  A AGL    I
Sbjct: 590 MVLHLLAERGVLDTGRVRVRTLTLPDSYQDHDKPEKMYAEAGLDAEGI 637


>gi|254460223|ref|ZP_05073639.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacterales bacterium
           HTCC2083]
 gi|206676812|gb|EDZ41299.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 624

 Score =  539 bits (1389), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 293/621 (47%), Positives = 393/621 (63%), Gaps = 18/621 (2%)

Query: 91  LKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDKILWDVG 150
           +K L+  EL+ LA E+RSE+   VS+T   L SSL  VELTVALH VF  P DK++WDVG
Sbjct: 1   MKGLSNSELETLAHELRSEVVEAVSETGGHLGSSLGVVELTVALHAVFDTPRDKLIWDVG 60

Query: 151 EQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDI 210
            Q Y HK+LTGRR  + TLR++ G+SG+T R+ESE+DPF A H   S+SA LG  +ARD+
Sbjct: 61  HQCYPHKVLTGRRERMKTLRQEGGLSGFTKRAESEFDPFGAAHSSTSISAALGFTIARDM 120

Query: 211 KGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKIEESPKTSINA 270
                  V +I +G+  AG AYEA++NAG     M VILND+  S+ P +         A
Sbjct: 121 GLPTGDAVAIIGDGSISAGMAYEALNNAGAEGRRMFVILNDNEMSIAPPV--------GA 172

Query: 271 LSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEELGL 330
           +S  LS + +S    +L+ +A+G    +   + + A +  +   G +   G T+FE+LG 
Sbjct: 173 MSKYLSGLYASP-LGELQTIAEGFEAALPGPLRDHARRARQLVTG-VADAGGTMFEDLGF 230

Query: 331 YYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSEAIEKQQEGASD 390
            Y+GPVDGH+++ L+SVL+  A   S GPVL+H  T + +     ++S   +K    A  
Sbjct: 231 QYVGPVDGHDMDQLLSVLR-AARTRSTGPVLIHCCTVKGKGYAPAEQSA--DKYHGVAKF 287

Query: 391 SNSLPFGNYSR----TYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYF 446
             S    + SR    +Y   F +AL   AE D  IV + A M     + +F + FP+R F
Sbjct: 288 DVSTGVQSKSRPNAPSYTSVFGKALSKLAEADPKIVGITAAMPSGTGMDIFADHFPKRMF 347

Query: 447 DVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLV 506
           DVG+AEQH VTF+AG+A GGLKPFC I S+FLQR YDQ+V+DV  Q LPVRF I  AGLV
Sbjct: 348 DVGIAEQHGVTFAAGMAAGGLKPFCAIYSSFLQRGYDQIVHDVALQNLPVRFAIDRAGLV 407

Query: 507 GSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYPRGAIVRT 566
           G+DGPT  GAFD+ ++S LPNM VMA SDE ELV MVAT A+ D  P+ FRYPRG+    
Sbjct: 408 GADGPTHAGAFDVGYLSALPNMTVMAASDEAELVHMVATAAAHDSGPIAFRYPRGSGTGV 467

Query: 567 DLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKP 626
           ++P   G  +EIGKG+++ EG DVA+L +GA +   LKA  L+   G+  TVADARF KP
Sbjct: 468 EIPEI-GEVLEIGKGRIVREGADVAILSFGAHLSESLKAADLMEAQGVSATVADARFAKP 526

Query: 627 LDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHA 686
           LD  L+R+L + H  LIT+E+GS GGFG+ V H++A +GLLD  +  R + LPD +I+ A
Sbjct: 527 LDHALIRKLVKTHKALITIEQGSQGGFGAMVLHYLAGEGLLDGDLAIRTMTLPDRFIDQA 586

Query: 687 SPTQQLALAGLTGHHIAATAL 707
           +P    A AGLT   IAATAL
Sbjct: 587 APDAMYADAGLTATDIAATAL 607


>gi|71083316|ref|YP_266035.1| 1-deoxy-D-xylulose-5-phosphate synthase [Candidatus Pelagibacter
           ubique HTCC1062]
 gi|118595598|sp|Q4FN07.1|DXS_PELUB RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|71062429|gb|AAZ21432.1| 1-D-deoxyxylulose 5-phosphate synthase [Candidatus Pelagibacter
           ubique HTCC1062]
          Length = 637

 Score =  538 bits (1386), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 282/635 (44%), Positives = 390/635 (61%), Gaps = 20/635 (3%)

Query: 88  PLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDKILW 147
           P  L+ L+  +L++++ E+R E+   VS+T   L + L  VELTVALH+VF  P D+++W
Sbjct: 13  PSDLRKLSENDLQEVSNEVRKEMIDAVSETGGHLGAGLGVVELTVALHYVFDTPNDRLIW 72

Query: 148 DVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVA 207
           DVG QTY HKILTGR+S I TLR+ +G+SG+T RSESEYDPF A H   S+S+ LGMA A
Sbjct: 73  DVGHQTYPHKILTGRKSKIKTLRQGNGLSGFTKRSESEYDPFGAAHSSTSISSALGMAEA 132

Query: 208 RDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKIEESPKTS 267
             +  K   I+ VI +G   AG AYEAM+NAG   + MIVILND+  S+           
Sbjct: 133 NKLSNKLNNIIAVIGDGAISAGMAYEAMNNAGASKTKMIVILNDNDMSI--------AKP 184

Query: 268 INALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEE 327
           + A+ + L+++ + K +  LRE  K +     +     A K +++ R  +   G TLF  
Sbjct: 185 VGAMRTYLAKLLTGKIYFSLRETFKLIVSAFSKRFSVKAGKAEDFLRSAV--TGGTLFNS 242

Query: 328 LGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSEAIEKQQEG 387
           LG YY+GP+DGH++  LI +L+        GP+++H+ T++ +     +K+        G
Sbjct: 243 LGFYYVGPIDGHDLSTLIPILKNARDSKHQGPIMIHIKTQKGKGYSYAEKAS---DHYHG 299

Query: 388 ASDSN-----SLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFP 442
            S  N      +  G     Y   F   LV  AE+D  +V V A M     + +F + FP
Sbjct: 300 VSKFNVVTGEQVKSGTNLPAYTKVFANTLVKHAERDSKVVGVTAAMPGGTGMDIFAKDFP 359

Query: 443 ERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITS 502
           +R FDVG+AEQHAVTF+AGLA  G KP+  I S FLQRAYDQVV+DV  Q LPVRF+I  
Sbjct: 360 KRMFDVGIAEQHAVTFAAGLATEGYKPYVAIYSTFLQRAYDQVVHDVAIQSLPVRFIIDR 419

Query: 503 AGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYPRGA 562
           AGLVG+DG T  G+FDIT++S LPN IVMAPSDE ELV M  T  +I+++P   RYPRG 
Sbjct: 420 AGLVGADGSTHAGSFDITYLSTLPNFIVMAPSDEAELVKMTNTSMTINNKPCAIRYPRGN 479

Query: 563 IVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADAR 622
            +  +LP      IEIGKG+V+ EGK V +L  G  ++ C  A A L   GI+ T+ DAR
Sbjct: 480 GIGVELPSIDE-NIEIGKGRVIQEGKQVCILSIGTRLEECKIAAAELKNKGIESTIVDAR 538

Query: 623 FCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNY 682
           F KPLD +L+ +  + H  +ITVEEGSIGGFGSHV + ++  G+ D G+K+R ++LPD +
Sbjct: 539 FAKPLDQELILKCAREHEAMITVEEGSIGGFGSHVENLLSEKGIFDKGLKFRTMILPDIF 598

Query: 683 IEHASPTQQLALAGLTGHHIAATALSLLGRTREAL 717
           IE  SP +   +AGL    I+   L +L  T+E++
Sbjct: 599 IEQDSPKKMYDVAGLNASQISKKILDIL-FTKESI 632


>gi|89052661|ref|YP_508112.1| 1-deoxy-D-xylulose-5-phosphate synthase [Jannaschia sp. CCS1]
 gi|118595486|sp|Q28W25.1|DXS2_JANSC RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase 2; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase 2; Short=DXP
           synthase 2; Short=DXPS 2
 gi|88862210|gb|ABD53087.1| 1-deoxy-D-xylulose-5-phosphate synthase [Jannaschia sp. CCS1]
          Length = 636

 Score =  537 bits (1383), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 296/649 (45%), Positives = 396/649 (61%), Gaps = 32/649 (4%)

Query: 74  WDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVA 133
            D+  TPILD V  P  L+ ++  +L Q A E+R+E+ S VS+T   L SSL  VEL+VA
Sbjct: 1   MDRPHTPILDQVNYPSDLRRMSNADLAQCADELRAEVISAVSETGGHLGSSLGVVELSVA 60

Query: 134 LHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGH 193
           +H VF+ P DK++WDVG Q Y HK+LTGRR  I TLR+KDG+SG+T RSESEYDPF A H
Sbjct: 61  IHAVFNTPYDKLVWDVGHQCYPHKVLTGRRDRIRTLRQKDGLSGFTKRSESEYDPFGAAH 120

Query: 194 GCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSR 253
              S+SA LG A A+D+       + VI +G+  AG AYEA++NAG L   + VILND+ 
Sbjct: 121 SSTSISAALGFAAAQDLGEATGDGIAVIGDGSISAGMAYEALNNAGDLGKRLFVILNDNE 180

Query: 254 HSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYA 313
            S+ P         + A+S  L+ + +      L+++A G+   +   + + A +  E  
Sbjct: 181 MSIAPP--------VGAMSKYLTDLSAKSPLATLKDIADGVASHLPEPIRQGAERARELV 232

Query: 314 RGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAE 373
            G      +TLFE LG  YIGPVDGH++E+L++ L+  A   + GPVL+H VT + +   
Sbjct: 233 TGH--QPSATLFEHLGFTYIGPVDGHDMEELLTTLR-AAKARATGPVLIHAVTVKGKGYS 289

Query: 374 DTQKSE-----------AIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIV 422
             + S+           A  +Q++ A ++ S         Y   F + L+  AE D  IV
Sbjct: 290 PAELSDDCYHGVAKFDVATGQQKKSAPNAPS---------YTSVFGQTLLNMAEADSRIV 340

Query: 423 VVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAY 482
            V A M     +   Q+  P R FDVG+AEQHAVTFSAG+A GGLKPFC I S+FLQR Y
Sbjct: 341 GVTAAMPGGTGISTLQKAKPNRVFDVGIAEQHAVTFSAGMAAGGLKPFCAIYSSFLQRGY 400

Query: 483 DQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDM 542
           DQ+V+DV  Q LPVRF+I  AGLVG+DGPT  GAFDI ++S LPNM VMA +DE ELV M
Sbjct: 401 DQIVHDVALQSLPVRFMIDRAGLVGADGPTHAGAFDIGYLSALPNMTVMACADEAELVHM 460

Query: 543 VATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNC 602
           +AT A+ +D P+  RYPRG      LP  +G  +EIGKG+V+ +G DVA+L +GA ++  
Sbjct: 461 MATAAAHNDGPIALRYPRGEGTGVALPD-QGDVLEIGKGRVIQDGHDVAILSFGAHLEEA 519

Query: 603 LKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIA 662
             A   L   G+ VTVADARF KPLD  L+ +L   H+ LITVE+G++ GFG  V H +A
Sbjct: 520 KDAATALEARGLSVTVADARFAKPLDTTLIDDLMTKHSALITVEQGAVLGFGGLVLHHLA 579

Query: 663 LDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
             G LD     R + LPD +I+ ASP +  A AGLT   IA  AL  +G
Sbjct: 580 ATGQLDGRCAVRTLHLPDRFIDQASPAEMYADAGLTADDIAQAALEAMG 628


>gi|188581083|ref|YP_001924528.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacterium populi
           BJ001]
 gi|179344581|gb|ACB79993.1| deoxyxylulose-5-phosphate synthase [Methylobacterium populi BJ001]
          Length = 660

 Score =  536 bits (1382), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 303/648 (46%), Positives = 402/648 (62%), Gaps = 43/648 (6%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           T IL+ +E P RL+ L   EL+++A  +R+E+   VS T   L S L  VELTVALHHVF
Sbjct: 9   TTILEGLETPDRLRLLPESELQRVADAVRAEMIDAVSITGGHLGSGLGVVELTVALHHVF 68

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+I+WDVG Q Y HKILTGRR  I TLR+  G+SG+T RSESEYDPF A H   S+
Sbjct: 69  DTPDDRIVWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTKRSESEYDPFGAAHSSTSI 128

Query: 199 SAGLGMAVARDIK-----------GKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIV 247
           SA LGMAVARD+            GKR  ++ VI +G+  AG AYEAM+NAG L S +IV
Sbjct: 129 SAALGMAVARDLDDAEAKAKGEAPGKRRNMIAVIGDGSMSAGMAYEAMNNAGALHSRLIV 188

Query: 248 ILNDSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAA 307
           ILND+  S+ P         + A+S+ L+R+ S  ++R LRE AK + K + + +++ AA
Sbjct: 189 ILNDNDMSIAP--------PVGAMSAYLARLASGGTYRSLRETAKQLGKLLPKALYQRAA 240

Query: 308 KVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTE 367
             +EYAR +I   G T+FEE+G +Y+GPVDGHN++ L+ VL+ V      GP+L+HVVT+
Sbjct: 241 AAEEYARSLI-VGGGTMFEEMGFHYVGPVDGHNLDHLLPVLKNVRD-SDQGPILLHVVTQ 298

Query: 368 ENR----------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEK 417
           + +          R     K + +   Q  A  +        +  Y   F E+L+  A+ 
Sbjct: 299 KGKGYAPAEASADRYHGVVKFDVVSGVQAKAKAN--------APAYTRVFGESLIKAADA 350

Query: 418 DKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAF 477
           D  +V + A M     + LF +  P+R FDVG+AEQHAVTF+ GLA  G KPF  I S F
Sbjct: 351 DPKVVAITAAMPGGTGIDLFGKAHPDRTFDVGIAEQHAVTFAGGLATEGYKPFVAIYSTF 410

Query: 478 LQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDED 537
           LQRAYDQVV+DV  Q LPVRF +  AGLVG+DG T  GAFD+ ++ CLPNM VMA +DE 
Sbjct: 411 LQRAYDQVVHDVALQNLPVRFCLDRAGLVGADGATHAGAFDLAYLCCLPNMTVMAAADEA 470

Query: 538 ELVDMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVL--VEGKDVALLGY 595
           ELV MVAT  + D  P+  RYPRG  V  +LP   G P+ IG+G+V+   EG  VALL  
Sbjct: 471 ELVHMVATAHAHDSGPIALRYPRGEGVGVELP-ESGEPLAIGRGRVVRRPEGARVALLSL 529

Query: 596 GAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGS 655
           G  +   LKA   L   G+ V+VADARF KPLD +++ +L  +H  L+TVEEGS+GGFG+
Sbjct: 530 GTRLSEALKAADALEAEGVAVSVADARFAKPLDAEMIVDLANSHEVLVTVEEGSVGGFGA 589

Query: 656 HVSHFIALDGLLDSG-VKWRPIVLPDNYIEHASPTQQLALAGLTGHHI 702
            V H ++  G+LD+G V+ R + LPD Y +H  P +  A AGL    I
Sbjct: 590 MVLHLLSERGVLDAGRVRVRTLTLPDVYQDHDKPEKMYAEAGLDAEGI 637


>gi|224004236|ref|XP_002295769.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|209585801|gb|ACI64486.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 747

 Score =  536 bits (1382), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 313/754 (41%), Positives = 430/754 (57%), Gaps = 79/754 (10%)

Query: 27  IEFLSSNISRELEISRINLCPSSSSITSSKLVTVSRICALPDIDDFFWDKEPTPILDLVE 86
           ++FLSS I+  +  +      +    TSS   T +R+    D    +      PILD V 
Sbjct: 1   MKFLSSTIAAAILATSSAFTTTLPRRTSSIQPTSTRLHDTTDNGPPYSGPASKPILDTVN 60

Query: 87  NPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDKIL 146
            P  +K L +KELKQLA E+R EL   VSKT     SSL  +ELTVALH+VF  P D I+
Sbjct: 61  YPHDMKRLDMKELKQLAHELRWELIEAVSKTGGHFSSSLGVIELTVALHYVFDMPEDDII 120

Query: 147 WDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAV 206
           WDV  Q Y HK+LTGRR    TLR+  GISG+  R ESEYD F AGH   S+SA  GM+V
Sbjct: 121 WDVAHQCYPHKMLTGRRDRFPTLRQLGGISGFCKRKESEYDSFGAGHSSTSISAAQGMSV 180

Query: 207 ARDIKGKRE--CIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKIEES- 263
           A+ +  KR+  CI  VI +G    G AYEAM+NAGYL S MIV+LND+     P   ++ 
Sbjct: 181 AKSLLNKRKNNCIA-VIGDGAITGGMAYEAMNNAGYLSSRMIVVLNDNGQVSLPTGTQTA 239

Query: 264 ----PKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
               P + ++A +S L     SK F+  R+ AK + +     + +   ++DEYARG++  
Sbjct: 240 GGVRPASQLSAYTSNLI---VSKPFQDFRDFAKSLNRLFPENVQDVNKRLDEYARGLV-- 294

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR----RAEDT 375
            G T+FEELG +Y+GP+DGH++++++ +L+++    S  PVL+H+ T + +        +
Sbjct: 295 TGGTVFEELGFFYVGPIDGHDLDNMVPILEKLRDSDSTKPVLLHIKTNKGQGYPPALAAS 354

Query: 376 QKSEAIEK-------QQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGM 428
            K   + K       Q +G + S SL            F  A++  A +D+ IV + A M
Sbjct: 355 DKMHGVGKFDIATGIQVKGKAASPSL---------TSIFANAMIDAATEDRAIVGITAAM 405

Query: 429 EMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVND 488
                + +F  +FP+R +DVG+AEQHAVTF+AG+AC GLKPFC I S F+QR YDQVV+D
Sbjct: 406 PGGTGMDIFGRRFPKRTYDVGIAEQHAVTFAAGMACEGLKPFCCIYSTFMQRGYDQVVHD 465

Query: 489 VDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVAS 548
           V  Q LPVR ++  AG+VG+DGPT  G +D+ ++ C+PN+ +M+PSDE EL +MV T A+
Sbjct: 466 VAIQNLPVRMILDRAGVVGNDGPTHHGCYDLAYLGCIPNLTIMSPSDEIELKNMVMTCAA 525

Query: 549 IDDRPVCFRYPR----GAIVRTDLPGY---------RGIPIEIGKGKV------------ 583
            DD P   RYPR    GA    +L GY         +G  I+IGKG++            
Sbjct: 526 FDDGPTVLRYPRGVGYGAEKLQNLFGYELENGEVPAKGEVIKIGKGRIIRRPGGIHALKE 585

Query: 584 ------------------LVEGKDVALLGYGAMVQNCLKARALLSKLGID--VTVADARF 623
                             L++   +A+L  G  +   L A   +     D  VTVADARF
Sbjct: 586 ELTANGSSDSRMGAGSRGLLKENRIAILTLGTRLSEALVAADEIEGANPDLAVTVADARF 645

Query: 624 CKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSG-VKWRPIVLPDNY 682
            KPLD  L+REL  N+  ++TVEEGSIGGFG HV HF++LDG LD G +K+RP+VLPD Y
Sbjct: 646 MKPLDEDLIRELSDNNGIIVTVEEGSIGGFGDHVLHFLSLDGALDDGELKFRPMVLPDTY 705

Query: 683 IEHASPTQQLALAGLTGHHIAATALSLLGRTREA 716
            E A+  +Q  +AGL  HHI  T L L     EA
Sbjct: 706 FEAATQYEQYEMAGLNSHHIRDTVLRLANVKVEA 739


>gi|218532564|ref|YP_002423380.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacterium
           extorquens CM4]
 gi|218524867|gb|ACK85452.1| deoxyxylulose-5-phosphate synthase [Methylobacterium extorquens
           CM4]
          Length = 658

 Score =  536 bits (1381), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 305/648 (47%), Positives = 403/648 (62%), Gaps = 43/648 (6%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           T IL+ +E P RL+ L   EL+++A  +R+E+   VS T   L S L  VELTVALHHVF
Sbjct: 6   TTILEGLETPDRLRLLPESELRRVADAVRAEMIDAVSITGGHLGSGLGVVELTVALHHVF 65

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+I+WDVG Q Y HKILTGRR  I TLR+  G+SG+T RSESEYDPF A H   S+
Sbjct: 66  DTPDDRIVWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTKRSESEYDPFGAAHSSTSI 125

Query: 199 SAGLGMAVARDI-------KG----KRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIV 247
           SA LGMAVARD+       KG    KR  ++ VI +G+  AG AYEAM+NAG L S +IV
Sbjct: 126 SAALGMAVARDLEEADAKAKGGPAPKRRNMIAVIGDGSMSAGMAYEAMNNAGALHSRLIV 185

Query: 248 ILNDSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAA 307
           ILND+  S+ P         + A+S+ L+R+ S  ++R LRE AK + K + + +++ AA
Sbjct: 186 ILNDNDMSIAP--------PVGAMSAYLARLASGGTYRSLRETAKQLGKLLPKALYQRAA 237

Query: 308 KVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTE 367
             +EYAR +I   G T+FEE+G +Y+GPVDGHN++ L+ VL+ V      GP+L+HVVT+
Sbjct: 238 AAEEYARSLI-VGGGTMFEEMGFHYVGPVDGHNLDHLLPVLKNVRD-SDQGPILLHVVTQ 295

Query: 368 ENR----------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEK 417
           + +          R     K + +   Q  A  +        +  Y   F E+L+  A+ 
Sbjct: 296 KGKGYAPAEASADRYHGVVKFDVVSGVQAKAKAN--------APAYTRVFGESLIKAADA 347

Query: 418 DKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAF 477
           D  +V + A M     + LF +  P+R FDVG+AEQHAVTF+ GLA  G KPF  I S F
Sbjct: 348 DPKVVAITAAMPGGTGIDLFGKAHPDRTFDVGIAEQHAVTFAGGLATEGYKPFVAIYSTF 407

Query: 478 LQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDED 537
           LQRAYDQVV+DV  Q L VRF +  AGLVG+DG T  GAFD+ ++ CLPNM VMA +DE 
Sbjct: 408 LQRAYDQVVHDVALQNLAVRFCLDRAGLVGADGATHAGAFDLAYLCCLPNMTVMAAADEA 467

Query: 538 ELVDMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVL--VEGKDVALLGY 595
           ELV MVAT  + D  P+  RYPRG  V  +LP   G+P+ IG+G+V+   EG  VALL  
Sbjct: 468 ELVHMVATCHAHDSGPIALRYPRGEGVGIELP-ETGVPLAIGRGRVVRRPEGARVALLSL 526

Query: 596 GAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGS 655
           G  +   LKA   L   G+  TVADARF KPLD +L+ +L  +H  L+TVEEGS+GGFG+
Sbjct: 527 GTRLSEALKAADALEAEGVAATVADARFAKPLDAELIVDLAMSHEVLVTVEEGSVGGFGA 586

Query: 656 HVSHFIALDGLLDSG-VKWRPIVLPDNYIEHASPTQQLALAGLTGHHI 702
            V H +A  G+LD+G V+ R + LPD+Y +H  P +  A AGL    I
Sbjct: 587 MVLHLLAERGVLDTGRVRVRTLTLPDSYQDHDKPEKMYAEAGLDAEGI 634


>gi|50952770|gb|AAT90303.1| putative deoxyxylulose-5-phosphate synthase [uncultured
           proteobacterium eBACred25D05]
          Length = 647

 Score =  536 bits (1380), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 287/635 (45%), Positives = 395/635 (62%), Gaps = 18/635 (2%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           PILD V  P  L+ L+  +L Q+A E+R+E+  +VS+T   L SSL  VELTVALH +F 
Sbjct: 8   PILDKVSGPEDLRKLSDADLDQVAKELRNEVIEVVSQTGGHLGSSLGVVELTVALHAIFK 67

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P+DK++WDVG Q Y HKI+TGRR  +  LR+KDG+SG+T RSESEYDPF A H   S+S
Sbjct: 68  TPLDKLIWDVGHQCYPHKIITGRRKRMMGLRQKDGVSGFTKRSESEYDPFGAAHSSTSIS 127

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           A LG  + R++       + VI +G+  AG AYEAM+NAG  +  + VILND+  S+ P 
Sbjct: 128 AALGFTMGRELGQTVGDCIAVIGDGSISAGMAYEAMNNAGAENKRLFVILNDNEMSIAPP 187

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
           +         A+SS LS +  + +F +L+ +A+ +   +   M + A +  +   GM G 
Sbjct: 188 V--------GAMSSYLSGLYGNSAFHKLKTLAEEVEVHLPWAMRDGARRARQIVTGMHGQ 239

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN---RRAEDTQ 376
             +TLFEELG  Y+GP+DGHN+  L+SVL+  A   + GPVL+HV T++      AE++ 
Sbjct: 240 --ATLFEELGFDYLGPIDGHNMPQLLSVLR-AAKARATGPVLIHVCTKKGCGYAPAENSS 296

Query: 377 -KSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQ 435
            K   + K        +  P    + +Y   F +AL +EAE D  IV V A M     + 
Sbjct: 297 DKYHGVSKFDIATGLQSKTPAN--APSYTSIFGQALTIEAEADPRIVAVTAAMPSGTGVN 354

Query: 436 LFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLP 495
              + FP+R FDVG+AEQH VTF+AG+A  GLKPFC I S FLQR YDQ+V+DV  Q LP
Sbjct: 355 AMAKVFPKRVFDVGIAEQHGVTFAAGMAASGLKPFCAIYSTFLQRGYDQIVHDVALQNLP 414

Query: 496 VRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVC 555
           VRF I  AGLVG+DG T  GAFD+ ++S LPN +VMA +DE EL+ MV T A  D  P+ 
Sbjct: 415 VRFAIDRAGLVGADGATHAGAFDVAYLSNLPNFVVMAAADEAELMHMVRTAAEYDAGPIS 474

Query: 556 FRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGID 615
           FRYPRG  +  +LP  RG  +EIGKG+++ +G D+A+L +GA +    +A   L   GI 
Sbjct: 475 FRYPRGNGLGVELP-KRGEVLEIGKGRIIQDGSDIAILSFGAHLSVVQEAAVALKNKGIS 533

Query: 616 VTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWRP 675
           VT+ADARF KPLD  L+ EL  NH+ ++TVE+GS+GGF S V H++   G L  G+    
Sbjct: 534 VTIADARFAKPLDTDLIDELVNNHSAILTVEQGSVGGFSSLVLHYLMQSGQLRHGINIDS 593

Query: 676 IVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
           +VLPD +I+ ASP +  + AG++  H+      LL
Sbjct: 594 MVLPDRFIDQASPAEMYSDAGMSEGHVIDRCTKLL 628


>gi|298715557|emb|CBJ28110.1| 1-deoxy-D-xylulose 5-phosphate synthase, chloroplast precursor
           [Ectocarpus siliculosus]
          Length = 795

 Score =  535 bits (1379), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 302/709 (42%), Positives = 415/709 (58%), Gaps = 79/709 (11%)

Query: 73  FWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTV 132
           ++     P+LD V +P  +K  TI ELKQLA E+R E    VSKT   L SSL  +ELTV
Sbjct: 84  YYGPTSKPLLDSVHSPADMKRFTIAELKQLAYELRWETLEAVSKTGGHLGSSLGVIELTV 143

Query: 133 ALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAG 192
           ALH+VF AP DKI WDV  Q Y HKILTGRR  +H+LR+  G+SG+  RSESE+D F AG
Sbjct: 144 ALHYVFEAPEDKITWDVSHQVYPHKILTGRRDRMHSLRQSGGLSGFAKRSESEFDCFGAG 203

Query: 193 HGCNSVSAGLGMAVAR-DIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILND 251
           H   S+S+ +GM+V +  +  +R   V VI +G    G A+EAM+ AGYL    +VILND
Sbjct: 204 HSSTSISSAMGMSVGKSQLSKRRNNCVAVIGDGAITGGMAFEAMNCAGYLGVRHMVILND 263

Query: 252 SRHSLHPKIEESPKTSI--NALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKV 309
           +     P    S    +   ALSS   R+ SS+SF+ +R+VAK   K +   +    AK+
Sbjct: 264 NGQVSLPTGTHSAGGVVPAGALSSYTGRLMSSRSFKSVRDVAKAFNKLLPSNIQNVNAKI 323

Query: 310 DEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN 369
           DEYARGM+   G TLFEELG YY+GPVDGH++ +L+ +L+ +       PVL+H+ TE+ 
Sbjct: 324 DEYARGMM--SGGTLFEELGYYYVGPVDGHDLANLVPILENIRDKKDDKPVLLHIRTEKG 381

Query: 370 R------RAED-----TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKD 418
                   A D      + + A  KQ +G S + SL            F   L+  A +D
Sbjct: 382 MGYPPAMAASDKYHGVAKFNVATGKQHKGTSANPSL---------TSVFANTLIDIATED 432

Query: 419 KDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFL 478
           + +V + A M     + +F  +FP+R +DVG+AEQHAVTF+AG+A  GLKPFC + S F+
Sbjct: 433 RSVVGITAAMPGGTGMDMFGRRFPKRTYDVGIAEQHAVTFAAGMAVEGLKPFCCVYSTFM 492

Query: 479 QRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDE 538
           QRAYDQV++DV  Q+LPVR ++  AGLVG+DGPT  G+FD+T++  LP++++MAPSDE E
Sbjct: 493 QRAYDQVMHDVVVQKLPVRMILDRAGLVGNDGPTHHGSFDLTYLGTLPHIVIMAPSDEIE 552

Query: 539 LVDMVATVASIDDRPVCFRYPRGAIVRTD----LPGY-------RGIPIEIGKGKVLVEG 587
           L++M+ T  +IDD+P   RYPRG     +    L GY       +G  +EIGKG+++   
Sbjct: 553 LMNMIQTAYAIDDKPSVVRYPRGTGYGLEKLRSLFGYELDEMPAKGEEVEIGKGRIVRRP 612

Query: 588 KDVA-----LLGYGAMVQNCLKARALLSK----LGI------------------------ 614
           +  A     +L  G  +   L+A   L      +GI                        
Sbjct: 613 RATARQKAVILSLGTRLAPSLEAAIQLEDSFFLVGIGTPECPEGGGGGACGVEGNGGAEQ 672

Query: 615 ---------DVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDG 665
                     VTVADARF KPLD+ L+R L   H  ++TVEE ++GGFG+HV HF+ LDG
Sbjct: 673 SQAADNPDMGVTVADARFMKPLDVDLIRRLAGEHDAMLTVEENAVGGFGAHVLHFMVLDG 732

Query: 666 LLDSG-VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRT 713
           L+D G +K RP+VLPD +IE  + T+Q   AGL+  HI A+ L L  +T
Sbjct: 733 LVDDGNLKMRPMVLPDTFIEAGTQTEQYEEAGLSAGHIRASVLRLFDQT 781


>gi|254563642|ref|YP_003070737.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacterium
           extorquens DM4]
 gi|254270920|emb|CAX26925.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacterium
           extorquens DM4]
          Length = 658

 Score =  535 bits (1379), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 306/648 (47%), Positives = 402/648 (62%), Gaps = 43/648 (6%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           T IL+ +E P RL+ L   EL+++A  +R+E+   VS T   L S L  VELTVALHHVF
Sbjct: 6   TTILEGLETPDRLRLLPESELRRVADAVRAEMIDAVSITGGHLGSGLGVVELTVALHHVF 65

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+I+WDVG Q Y HKILTGRR  I TLR+  G+SG+T RSESEYDPF A H   S+
Sbjct: 66  DTPDDRIVWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTKRSESEYDPFGAAHSSTSI 125

Query: 199 SAGLGMAVARDI-------KG----KRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIV 247
           SA LGMAVARD+       KG    KR  ++ VI +G+  AG AYEAM+NAG L S +IV
Sbjct: 126 SAALGMAVARDLEEADAKAKGGPAPKRRNMIAVIGDGSMSAGMAYEAMNNAGALHSRLIV 185

Query: 248 ILNDSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAA 307
           ILND+  S+ P         + A+S+ L+R+ S  ++R LRE AK + K + + +++ AA
Sbjct: 186 ILNDNDMSIAP--------PVGAMSAYLARLASGGTYRSLRETAKQLGKLLPKALYQRAA 237

Query: 308 KVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTE 367
             +EYAR +I   G T+FEE+G +Y+GPVDGHN++ L+ VL+ V      GP+L+HVVT+
Sbjct: 238 AAEEYARSLI-VGGGTMFEEMGFHYVGPVDGHNLDHLLPVLKNVRD-SDQGPILLHVVTQ 295

Query: 368 ENR----------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEK 417
           + +          R     K + +   Q  A  +        +  Y   F E+L+  A+ 
Sbjct: 296 KGKGYAPAEASADRYHGVVKFDVVSGVQAKAKAN--------APAYTRVFGESLIKAADA 347

Query: 418 DKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAF 477
           D  +V + A M     + LF +  P+R FDVG+AEQHAVTF+ GLA  G KPF  I S F
Sbjct: 348 DPKVVAITAAMPGGTGIDLFGKAHPDRTFDVGIAEQHAVTFAGGLATEGYKPFVAIYSTF 407

Query: 478 LQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDED 537
           LQRAYDQVV+DV  Q L VRF +  AGLVG+DG T  GAFD+ ++ CLPNM VMA SDE 
Sbjct: 408 LQRAYDQVVHDVALQNLAVRFCLDRAGLVGADGATHAGAFDLAYLCCLPNMTVMAASDEA 467

Query: 538 ELVDMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVL--VEGKDVALLGY 595
           ELV MVAT  + D  P+  RYPRG  V  +LP   G+P+ IG+G+V+   EG  VALL  
Sbjct: 468 ELVHMVATCHAHDSGPIALRYPRGEGVGIELP-ETGVPLAIGRGRVVRRPEGARVALLSL 526

Query: 596 GAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGS 655
           G  +   LKA   L   G+  TVADARF KPLD +L+ +L  +H  L+TVEEGS+GGFG+
Sbjct: 527 GTRLSEALKAADALEAEGVAATVADARFAKPLDAELIVDLAMSHEVLVTVEEGSVGGFGA 586

Query: 656 HVSHFIALDGLLDSG-VKWRPIVLPDNYIEHASPTQQLALAGLTGHHI 702
            V H +A  G+LD+G V+ R + LPD Y +H  P +  A AGL    I
Sbjct: 587 MVLHLLAERGVLDTGRVRVRTLTLPDLYQDHDKPEKMYAEAGLDAEGI 634


>gi|240138460|ref|YP_002962932.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacterium
           extorquens AM1]
 gi|240008429|gb|ACS39655.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein,
           thiamin-binding [Methylobacterium extorquens AM1]
          Length = 660

 Score =  535 bits (1378), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 305/648 (47%), Positives = 403/648 (62%), Gaps = 43/648 (6%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           T IL+ +E P RL+ L   EL+++A  +R+E+   VS T   L S L  VELTVALHHVF
Sbjct: 9   TTILEGLETPDRLRLLPESELQRVADAVRAEMIDAVSITGGHLGSGLGVVELTVALHHVF 68

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+I+WDVG Q Y HKILTGRR  I TLR+  G+SG+T RSESEYDPF A H   S+
Sbjct: 69  DTPDDRIVWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTKRSESEYDPFGAAHSSTSI 128

Query: 199 SAGLGMAVARDI-------KG----KRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIV 247
           SA LGMAVARD+       KG    KR  ++ VI +G+  AG AYEAM+NAG L S +IV
Sbjct: 129 SAALGMAVARDLEEADAKAKGGPAPKRRNMIAVIGDGSMSAGMAYEAMNNAGALHSRLIV 188

Query: 248 ILNDSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAA 307
           ILND+  S+ P         + A+S+ L+R+ S  ++R LRE AK + K + + +++ AA
Sbjct: 189 ILNDNDMSIAP--------PVGAMSAYLARLASGGTYRSLRETAKQLGKLLPKALYQRAA 240

Query: 308 KVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTE 367
             +EYAR +I   G T+FEE+G +Y+GPVDGHN++ L+ VL+ V      GP+L+HVVT+
Sbjct: 241 AAEEYARSLI-VGGGTMFEEMGFHYVGPVDGHNLDHLLPVLKNVRD-SDQGPILLHVVTQ 298

Query: 368 ENR----------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEK 417
           + +          R     K + +   Q  A  +        +  Y   F E+L+  A+ 
Sbjct: 299 KGKGYAPAEASADRYHGVVKFDVVSGVQAKAKAN--------APAYTRVFGESLIKAADA 350

Query: 418 DKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAF 477
           D  +V + A M     + LF +  P+R FDVG+AEQHAVTF+ GLA  G KPF  I S F
Sbjct: 351 DPKVVAITAAMPGGTGIDLFGKAHPDRTFDVGIAEQHAVTFAGGLATEGYKPFVAIYSTF 410

Query: 478 LQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDED 537
           LQRAYDQVV+DV  Q L VRF +  AGLVG+DG T  GAFD+ ++ CLPNM VMA +DE 
Sbjct: 411 LQRAYDQVVHDVALQNLAVRFCLDRAGLVGADGATHAGAFDLAYLCCLPNMTVMAAADEA 470

Query: 538 ELVDMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVL--VEGKDVALLGY 595
           ELV MVAT  + D  P+  RYPRG  V  +LP   G+P+ IG+G+V+   EG  VALL  
Sbjct: 471 ELVHMVATCHAHDSGPIALRYPRGEGVGIELP-ETGVPLAIGRGRVVRRPEGARVALLSL 529

Query: 596 GAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGS 655
           G  +   LKA   L   G+  TVADARF KPLD +L+ +L  +H  L+TVEEGS+GGFG+
Sbjct: 530 GTRLSEALKAADALEAEGVAATVADARFAKPLDAELIVDLAMSHEVLVTVEEGSVGGFGA 589

Query: 656 HVSHFIALDGLLDSG-VKWRPIVLPDNYIEHASPTQQLALAGLTGHHI 702
            V H +A  G+LD+G V+ R + LPD+Y +H  P +  A AGL    I
Sbjct: 590 MVLHLLAERGVLDTGRVRVRTLTLPDSYQDHDKPEKMYAEAGLDAEGI 637


>gi|254456404|ref|ZP_05069833.1| 1-deoxy-D-xylulose-5-phosphate synthase [Candidatus Pelagibacter
           sp. HTCC7211]
 gi|207083406|gb|EDZ60832.1| 1-deoxy-D-xylulose-5-phosphate synthase [Candidatus Pelagibacter
           sp. HTCC7211]
          Length = 638

 Score =  535 bits (1378), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 280/639 (43%), Positives = 389/639 (60%), Gaps = 27/639 (4%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
            LD +  P  LK ++ K+L++++ E+R E+ S VS+T   L + L  VELTVALH+VF  
Sbjct: 7   FLDNINFPSDLKKISEKDLQKVSDEVRKEMISAVSETGGHLGAGLGVVELTVALHYVFDT 66

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P DK++WDVG Q+Y HKI+TGR+  I TLR+ +G+SG+T RSESEYDPF A H   S+S+
Sbjct: 67  PNDKLIWDVGHQSYPHKIITGRKKKIRTLRQGNGLSGFTKRSESEYDPFGAAHSSTSISS 126

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKI 260
            LG+A A  +  K   ++ VI +G   AG AYEAM+NAG   + MIVILND+  S+    
Sbjct: 127 ALGIAEANKLANKTSNVIAVIGDGAISAGMAYEAMNNAGASKTKMIVILNDNDMSI---- 182

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQ 320
                  + A+ + L+++ + K +   RE  K +T    +     A K +++ R  +   
Sbjct: 183 ----AKPVGAMRTYLAKLFTGKIYFSFRETLKLITSAFSKRFSAKAGKAEDFLRSAV--T 236

Query: 321 GSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE- 379
           G TLF  LG YY GP+DGH++ DLI +L+        GP+++HV T++ +     +K+  
Sbjct: 237 GGTLFSSLGFYYAGPIDGHDLNDLIPILKNARDSKHEGPIMIHVKTQKGKGYSYAEKATD 296

Query: 380 --------AIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMD 431
                    +E  ++  S SN LP       Y   F   LV  A+KD  IV + A M   
Sbjct: 297 NYHGVSKFNVETGEQIKSISN-LP------AYTKVFANTLVKHAQKDSKIVGITAAMPGG 349

Query: 432 LSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQ 491
             + +F ++FP+R FDVG+AEQHAVTFSAGLA  G KP+  I S FLQRAYDQVV+DV  
Sbjct: 350 TGMDIFGKEFPKRMFDVGIAEQHAVTFSAGLATEGYKPYAAIYSTFLQRAYDQVVHDVAI 409

Query: 492 QRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDD 551
           Q LPVRF I  AGLVG+DG T  G+FDIT++S LPN IVMA SDE ELV M+ T   I+D
Sbjct: 410 QSLPVRFAIDRAGLVGADGSTHAGSFDITYLSTLPNFIVMAASDEAELVKMINTSVDIND 469

Query: 552 RPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSK 611
           +P   RYPRG  V  +LP      IEIGKG+++ +GK   +L  G  ++ C  A   L  
Sbjct: 470 KPCAIRYPRGNGVGLELPSIDE-KIEIGKGRIIQQGKQACILSLGTRLEECKFAAEELKS 528

Query: 612 LGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGV 671
            G+  T+ DARF KPLD +L+ +  + H  +IT+EEGSIGGFGSHV + +A  G+ D G+
Sbjct: 529 KGVSTTIIDARFAKPLDRELILKCAREHEVMITIEEGSIGGFGSHVKNLLAETGVFDKGL 588

Query: 672 KWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
           K+R + LPD++I+  +P     LAGL+   I+   L +L
Sbjct: 589 KFRSMTLPDSFIDQDTPKNMYELAGLSSSQISKKILDIL 627


>gi|452750501|ref|ZP_21950248.1| 1-deoxy-D-xylulose 5-phosphate synthase [alpha proteobacterium
           JLT2015]
 gi|451961695|gb|EMD84104.1| 1-deoxy-D-xylulose 5-phosphate synthase [alpha proteobacterium
           JLT2015]
          Length = 615

 Score =  535 bits (1378), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 282/606 (46%), Positives = 377/606 (62%), Gaps = 24/606 (3%)

Query: 99  LKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKI 158
           ++QLA E+R+E+   VS+T   L + L  VELTVALH++F+ P D+++WDVG Q Y HKI
Sbjct: 1   MRQLADEVRAEMIDAVSQTGGHLGAGLGVVELTVALHYIFNTPEDRLIWDVGHQAYPHKI 60

Query: 159 LTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIV 218
           LTGRR  + T+R+  G+SG+T RSESEYDPF A H   S+SA LG AVA  + G+    +
Sbjct: 61  LTGRRDRMRTIRQGGGLSGFTKRSESEYDPFGAAHSSTSISAALGFAVANKLSGRDGKAI 120

Query: 219 TVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKIEESPKTSINALSSTLSRI 278
            VI +G   AG AYEAM+NA    + ++VILND+  S+ P         +  LS+ L+R+
Sbjct: 121 AVIGDGAMSAGMAYEAMNNAAQAGNRLVVILNDNDMSIAP--------PVGGLSAYLARM 172

Query: 279 QSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDG 338
            SS  +  LR +AK    R+ +  +  A+K +EYARGM    G TLFEELG YY+GP+DG
Sbjct: 173 VSSSEYLGLRSLAKKFASRLHKRFYNAASKAEEYARGM--ATGGTLFEELGFYYVGPIDG 230

Query: 339 HNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSEAIEKQQEGASDSNSL---- 394
           HN++ LI VL+ V      GP+LVHVVT   ++      +E    +  G +  + +    
Sbjct: 231 HNLDHLIPVLENVRD-SEQGPILVHVVT---KKGHGYAPAEQSADKYHGVTKFDVVSGEM 286

Query: 395 -PFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQ 453
            P      +Y   F +AL+ EAE+D  +  + A M     +  F + FPER FDVG+AEQ
Sbjct: 287 APKKAGPPSYTGVFAKALIAEAERDDRVCAITAAMPGGTGVDKFAQHFPERSFDVGIAEQ 346

Query: 454 HAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQ 513
           H VTF+AGLA  G++PF  I S FLQRA+DQVV+DV  Q LPVRF I  AGLVG+DG T 
Sbjct: 347 HGVTFAAGLAAQGMRPFAAIYSTFLQRAFDQVVHDVAIQNLPVRFAIDRAGLVGADGQTH 406

Query: 514 CGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYPRGAIVRTDLPGYRG 573
            G+FD+T+++ LPNM+VMA +DE ELV M  T A  DD P+ FRYPRG     +LP    
Sbjct: 407 AGSFDVTYLATLPNMVVMAAADEAELVHMTHTAAEYDDGPIAFRYPRGNGTGVELP---E 463

Query: 574 IP--IEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKL 631
            P  +EIGKG+VL EG  VA+L  G  +   L A   L   G+  TVAD RF KPLD  L
Sbjct: 464 TPERLEIGKGRVLREGSKVAILSLGTRLGEALIAADELDAKGLPTTVADLRFAKPLDTAL 523

Query: 632 VRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQ 691
           +R+L   H  L+TVEEG+IGG G+HV    + +GLLD+G+K R + LPD + +   P +Q
Sbjct: 524 IRKLAATHDVLVTVEEGAIGGLGAHVLTLASDEGLLDAGLKIRTMRLPDIFQDQDDPKRQ 583

Query: 692 LALAGL 697
              AGL
Sbjct: 584 YEEAGL 589


>gi|86136863|ref|ZP_01055441.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseobacter sp. MED193]
 gi|85826187|gb|EAQ46384.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseobacter sp. MED193]
          Length = 642

 Score =  535 bits (1378), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 294/652 (45%), Positives = 400/652 (61%), Gaps = 36/652 (5%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           D+  TP+LD +  P  +K L+  +L QLA E+R E  S VS+T   L + L  VELTVAL
Sbjct: 3   DRPSTPLLDQIARPTDMKGLSDSQLVQLAHELRQETISAVSETGGHLGAGLGVVELTVAL 62

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H +F  P DK++WDV  Q+Y HKILT RR  I TLR K G+SG+T RSES YDPF A H 
Sbjct: 63  HAIFDTPRDKLIWDVSHQSYPHKILTERRDRIRTLRTKGGLSGFTKRSESPYDPFGAAHS 122

Query: 195 CNSVSAGLGMAVARDI-----KGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVIL 249
             S+SA LG +VARD+     +G  E I  VI +G+  AG A+EAM+NAG+L   MIVIL
Sbjct: 123 STSISAALGFSVARDLGGVVPEGLGEAI-AVIGDGSMSAGMAFEAMNNAGHLKKRMIVIL 181

Query: 250 NDSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKV 309
           ND+  S+ P         + ALSS LSR+ + + F++L+ VAKG    +     E A + 
Sbjct: 182 NDNEMSIAP--------PVGALSSYLSRLYAEEPFQELKAVAKGAASLLPEPFREGAKRA 233

Query: 310 DEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN 369
            +  +GM    G T+FE  G  Y+GP+DGH+++ L+ VL+ V +  + GPVL+HV+T++ 
Sbjct: 234 KDMLKGMA--VGGTMFESFGFSYLGPIDGHDMDQLLPVLRTVKARAT-GPVLIHVLTKKG 290

Query: 370 R----------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDK 419
           +          +   T K + +  +Q   + SN+        +Y   F + LV  A KD 
Sbjct: 291 KGYGPAEAARDKGHATAKFDVVTGKQH-KTPSNA-------PSYTGVFGDELVKLAAKDD 342

Query: 420 DIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQ 479
            I  V A M     L L  E++P R FDVG+AEQH VTF+A LA GG+KPFC + S FLQ
Sbjct: 343 KICAVTAAMPDGTGLSLMAERYPSRCFDVGIAEQHGVTFAAALAAGGMKPFCAMYSTFLQ 402

Query: 480 RAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDEL 539
           R YDQVV+DV  QRLPVRF I  AGLVG+DG T  G+FDI +M+ LP M+VMA +DE EL
Sbjct: 403 RGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGSFDIGYMANLPGMVVMAAADEAEL 462

Query: 540 VDMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMV 599
           V MV T A+ D  P+ FRYPRG     ++P    + +EIGKG+++ EG  VALL +G  +
Sbjct: 463 VHMVHTAAAHDAGPIAFRYPRGEGEGVEMPEEPQL-LEIGKGRMIQEGSRVALLSFGTRL 521

Query: 600 QNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSH 659
               KA   L+  GI  T+ADARF KPLD +++ +L   H  LI++EEG++GGFGSHV+ 
Sbjct: 522 GEVKKAAEALAAKGITPTIADARFAKPLDREMILDLVAGHEALISIEEGAVGGFGSHVAQ 581

Query: 660 FIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
            ++ +G+ D G K+R +VLPD +I+ +SP      A +    I A  L +LG
Sbjct: 582 LLSDEGVFDRGFKFRSMVLPDIFIDQSSPADMYETAAMNAPQIEAKVLEVLG 633


>gi|393719494|ref|ZP_10339421.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingomonas echinoides
           ATCC 14820]
          Length = 641

 Score =  535 bits (1377), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 301/648 (46%), Positives = 388/648 (59%), Gaps = 34/648 (5%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           D   TP+LD V  P  L++L   +L+QLA E+R E  + V  T   L S L  VELTVA+
Sbjct: 3   DALQTPLLDTVHYPADLRALAPTQLRQLADELRQETIAAVGVTGGHLGSGLGVVELTVAI 62

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H+VF  P D+++WDVG Q Y HKILTGRR  I TLR   G+SG+T RSESEYDPF A H 
Sbjct: 63  HYVFDTPNDRLVWDVGHQCYPHKILTGRRDRIRTLRMGGGLSGFTKRSESEYDPFGAAHS 122

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA LG AVA  I GK    + VI +G   AG AYEAM+NA    + ++VILND+  
Sbjct: 123 STSISASLGFAVANKIAGKPGKGIAVIGDGAMSAGMAYEAMNNAAQAGNRLVVILNDNDM 182

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+ P         +  LS+ LSRI SS+ F   R++A+ + KR+ + +     K +E+AR
Sbjct: 183 SIAP--------PVGGLSAYLSRIVSSREFLGFRDLARKLAKRLPKPIATGMRKTEEFAR 234

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---- 370
           GM    G TLFEELG YY+GP+DGHN++ LI VL+ V      GP+LVHVVT++ +    
Sbjct: 235 GMA--MGGTLFEELGFYYVGPIDGHNLDQLIPVLENVRD-AEEGPILVHVVTKKGKGYAP 291

Query: 371 ------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVV 424
                 +    QK + I   Q  A      P G     Y + F   L  EAE D  I  +
Sbjct: 292 AEAAADKYHGVQKFDVITGAQAKA------PPG--PPQYQNVFGAQLSKEAETDPLICAI 343

Query: 425 HAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQ 484
            A M     L  F +  PER+FDVG+AEQHAVTF+AGLA  G++PFC I S FLQRAYDQ
Sbjct: 344 TAAMPSGTGLDGFSKAHPERFFDVGIAEQHAVTFAAGLAAQGMRPFCAIYSTFLQRAYDQ 403

Query: 485 VVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVA 544
           VV+DV  Q LPVRF I  AGLVG+DG T  G+FD+T+M+ LPNM+VMAP+DE ELV M  
Sbjct: 404 VVHDVCIQNLPVRFAIDRAGLVGADGATHAGSFDVTYMASLPNMVVMAPADEAELVHMTH 463

Query: 545 TVASIDDRPVCFRYPRGAIVRTDLPGYRGIP--IEIGKGKVLVEGKDVALLGYGAMVQNC 602
           T    D  P+  RYPRG      LP    +P  +EIGKG+++ +G  VA+L  G  +   
Sbjct: 464 TAVLHDSGPIALRYPRGNGTGVALP---EVPQQLEIGKGRIVRQGHKVAILSLGTRLGEA 520

Query: 603 LKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIA 662
           L+A   L   G+  TVAD RF KPLD +L+R+L   H   +T+EE S+GG G+HV  F +
Sbjct: 521 LRAAEALEAKGLSTTVADLRFAKPLDEELIRKLLTTHEVAVTIEEASVGGLGAHVLTFAS 580

Query: 663 LDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
             GL+D+G+K R + LPD + +   P  Q A AGL    I  T L  L
Sbjct: 581 DAGLIDAGLKLRTMRLPDLFQDQDKPEVQYAQAGLDADAIVETVLKAL 628


>gi|163853706|ref|YP_001641749.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacterium
           extorquens PA1]
 gi|163665311|gb|ABY32678.1| deoxyxylulose-5-phosphate synthase [Methylobacterium extorquens
           PA1]
          Length = 658

 Score =  534 bits (1376), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 305/648 (47%), Positives = 402/648 (62%), Gaps = 43/648 (6%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           T IL+ +E P RL+ L   EL+++A  +R+E+   VS T   L S L  VELTVALHHVF
Sbjct: 6   TTILEGLETPDRLRLLPESELRRVADAVRAEMIDAVSITGGHLGSGLGVVELTVALHHVF 65

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+I+WDVG Q Y HKILTGRR  I TLR+  G+SG+T RSESEYDPF A H   S+
Sbjct: 66  DTPDDRIVWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTKRSESEYDPFGAAHSSTSI 125

Query: 199 SAGLGMAVARDI-------KG----KRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIV 247
           SA LGMAVARD+       KG    KR  ++ VI +G+  AG AYEAM+NAG L S +IV
Sbjct: 126 SAALGMAVARDLEEADAKAKGGPAPKRRNMIAVIGDGSMSAGMAYEAMNNAGALHSRLIV 185

Query: 248 ILNDSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAA 307
           ILND+  S+ P         + A+S+ L+R+ S  ++R LRE AK + K + + +++ AA
Sbjct: 186 ILNDNDMSIAP--------PVGAMSAYLARLASGGTYRSLRETAKQLGKLLPKALYQRAA 237

Query: 308 KVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTE 367
             +EYAR +I   G T+FEE+G +Y+GPVDGHN++ L+ VL+ V      GP+L+HVVT+
Sbjct: 238 AAEEYARSLI-VGGGTMFEEMGFHYVGPVDGHNLDHLLPVLKNVRD-SDQGPILLHVVTQ 295

Query: 368 ENR----------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEK 417
           + +          R     K + +   Q  A  +        +  Y   F E+L+  A+ 
Sbjct: 296 KGKGYAPAEASADRYHGVVKFDVVSGVQAKAKAN--------APAYTRVFGESLIKAADA 347

Query: 418 DKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAF 477
           D  +V + A M     + LF +  P+R FDVG+AEQHAVTF+ GLA  G KPF  I S F
Sbjct: 348 DPKVVAITAAMPGGTGIDLFGKAHPDRTFDVGIAEQHAVTFAGGLATEGYKPFVAIYSTF 407

Query: 478 LQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDED 537
           LQRAYDQVV+DV  Q L VRF +  AGLVG+DG T  GAFD+ ++ CLPNM VMA +DE 
Sbjct: 408 LQRAYDQVVHDVALQNLAVRFCLDRAGLVGADGATHAGAFDLAYLCCLPNMTVMAAADEA 467

Query: 538 ELVDMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVL--VEGKDVALLGY 595
           ELV MVAT  + D  P+  RYPRG  V  +LP   G+P+ IG+G+V+   EG  VALL  
Sbjct: 468 ELVHMVATCHAHDSGPIALRYPRGEGVGIELP-ETGVPLAIGRGRVVRRPEGARVALLSL 526

Query: 596 GAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGS 655
           G  +   LKA   L   G+  TVADARF KPLD +L+ +L  +H  L+TVEEGS+GGFG+
Sbjct: 527 GTRLSEALKAADALEAEGVAATVADARFAKPLDAELIVDLAMSHEVLVTVEEGSVGGFGA 586

Query: 656 HVSHFIALDGLLDSG-VKWRPIVLPDNYIEHASPTQQLALAGLTGHHI 702
            V H +A  G+LD+G V+ R + LPD Y +H  P +  A AGL    I
Sbjct: 587 MVLHLLAERGVLDTGRVRVRTLTLPDLYQDHDKPEKMYAEAGLDAEGI 634


>gi|163851366|ref|YP_001639409.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacterium
           extorquens PA1]
 gi|163662971|gb|ABY30338.1| deoxyxylulose-5-phosphate synthase [Methylobacterium extorquens
           PA1]
          Length = 657

 Score =  533 bits (1374), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 305/648 (47%), Positives = 402/648 (62%), Gaps = 43/648 (6%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           T IL+ +E P RL+ L   EL+++A  +R+E+   VS T   L S L  VELTVALHHVF
Sbjct: 6   TTILEGLETPDRLRLLPESELQRVADAVRAEMIDAVSITGGHLGSGLGVVELTVALHHVF 65

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+I+WDVG Q Y HKILTGRR  I TLR+  G+SG+T RSESEYDPF A H   S+
Sbjct: 66  DTPDDRIVWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTKRSESEYDPFGAAHSSTSI 125

Query: 199 SAGLGMAVARDI-------KG----KRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIV 247
           SA LGMAVARD+       KG    KR  ++ VI +G+  AG AYEAM+NAG L S +IV
Sbjct: 126 SAALGMAVARDLEEADAKAKGGPAPKRRNMIAVIGDGSMSAGMAYEAMNNAGALHSRLIV 185

Query: 248 ILNDSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAA 307
           ILND+  S+ P         + A+S+ L+R+ S  ++R LRE AK + K + + +++ AA
Sbjct: 186 ILNDNDMSIAP--------PVGAMSAYLARLASGGTYRSLRETAKQLGKLLPKALYQRAA 237

Query: 308 KVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTE 367
             +EYAR +I   G T+FEE+G +Y+GPVDGHN++ L+ VL+ V      GP+L+HVVT+
Sbjct: 238 AAEEYARSLI-VGGGTMFEEMGFHYVGPVDGHNLDHLLPVLKNVRD-SDQGPILLHVVTQ 295

Query: 368 ENR----------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEK 417
           + +          R     K + +   Q  A  +        +  Y   F E+L+  A+ 
Sbjct: 296 KGKGYAPAEASADRYHGVVKFDVVSGVQAKAKAN--------APAYTRVFGESLIKAADA 347

Query: 418 DKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAF 477
           D  +V + A M     + LF +  P+R FDVG+AEQHAVTF+ GLA  G KPF  I S F
Sbjct: 348 DPKVVAITAAMPGGTGIDLFGKAHPDRTFDVGIAEQHAVTFAGGLATEGYKPFVAIYSTF 407

Query: 478 LQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDED 537
           LQRAYDQVV+DV  Q L VRF +  AGLVG+DG T  GAFD+ ++ CLPNM VMA +DE 
Sbjct: 408 LQRAYDQVVHDVALQNLAVRFCLDRAGLVGADGATHAGAFDLAYLCCLPNMTVMAAADEA 467

Query: 538 ELVDMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVL--VEGKDVALLGY 595
           ELV MVAT  + D  P+  RYPRG  V  +LP   G+P+ IG+G+V+   EG  VALL  
Sbjct: 468 ELVHMVATCHAHDSGPIALRYPRGEGVGIELP-ETGVPLAIGRGRVVRRPEGARVALLSL 526

Query: 596 GAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGS 655
           G  +   LKA   L   G+  TVADARF KPLD +L+ +L  +H  L+TVEEGS+GGFG+
Sbjct: 527 GTRLSEALKAADALEAEGVAATVADARFAKPLDAELIVDLAMSHEVLVTVEEGSVGGFGA 586

Query: 656 HVSHFIALDGLLDSG-VKWRPIVLPDNYIEHASPTQQLALAGLTGHHI 702
            V H +A  G+LD+G V+ R + LPD Y +H  P +  A AGL    I
Sbjct: 587 MVLHLLAERGVLDTGRVRVRTLTLPDLYQDHDKPEKMYAEAGLDAEGI 634


>gi|218530174|ref|YP_002420990.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacterium
           extorquens CM4]
 gi|218522477|gb|ACK83062.1| deoxyxylulose-5-phosphate synthase [Methylobacterium extorquens
           CM4]
          Length = 660

 Score =  532 bits (1371), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 304/648 (46%), Positives = 401/648 (61%), Gaps = 43/648 (6%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           T IL+ +E P RL+ L   EL+++A  +R+E+   VS T   L S L  VELTVALHHVF
Sbjct: 9   TTILEGLETPDRLRLLPESELQRVADAVRAEMIDAVSITGGHLGSGLGVVELTVALHHVF 68

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+I+WDVG Q Y HKILTGRR  I TLR+  G+SG+T RSESEYDPF A H   S+
Sbjct: 69  DTPDDRIVWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTKRSESEYDPFGAAHSSTSI 128

Query: 199 SAGLGMAVARDI-------KG----KRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIV 247
           SA LGMAVARD+       KG    KR  ++ VI +G+  AG AYEAM+NAG L S +IV
Sbjct: 129 SAALGMAVARDLEEADAKAKGGPAPKRRNMIAVIGDGSMSAGMAYEAMNNAGALHSRLIV 188

Query: 248 ILNDSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAA 307
           ILND+  S+ P         + A+S+ L+R+ S  ++R LRE AK + K + + +++ AA
Sbjct: 189 ILNDNDMSIAP--------PVGAMSAYLARLASGGTYRSLRETAKQLGKLLPKALYQRAA 240

Query: 308 KVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTE 367
             +EYAR +I   G T+FEE+G +Y+GPVDGHN++ L+ VL+ V      GP+L+HVVT+
Sbjct: 241 AAEEYARSLI-VGGGTMFEEMGFHYVGPVDGHNLDHLLPVLKNVRD-SDQGPILLHVVTQ 298

Query: 368 ENR----------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEK 417
           + +          R     K + +   Q  A  +        +  Y   F E+L+  A+ 
Sbjct: 299 KGKGYAPAEASADRYHGVVKFDVVSGVQAKAKAN--------APAYTRVFGESLIKAADA 350

Query: 418 DKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAF 477
           D  +V + A M     + LF +  P+R FDVG+AEQHAVTF+ GLA  G KPF  I S F
Sbjct: 351 DPKVVAITAAMPGGTGIDLFGKAHPDRTFDVGIAEQHAVTFAGGLATEGYKPFVAIYSTF 410

Query: 478 LQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDED 537
           LQRAYDQVV+DV  Q L VRF +  AGLVG+DG T  GAFD+ ++ CLPNM VMA +DE 
Sbjct: 411 LQRAYDQVVHDVALQNLAVRFCLDRAGLVGADGATHAGAFDLAYLCCLPNMTVMAAADEA 470

Query: 538 ELVDMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVL--VEGKDVALLGY 595
           ELV MVAT  + D  P+  RYPRG  V  +LP   G+P+ IG+G+V+   EG  VALL  
Sbjct: 471 ELVHMVATCHAHDSGPIALRYPRGEGVGIELP-ETGVPLAIGRGRVVRRPEGARVALLSL 529

Query: 596 GAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGS 655
           G  +   LKA   L   G+  TVADARF KPLD +L+ +L  +H  L+TVEEGS+GGFG+
Sbjct: 530 GTRLSEALKAADALEAEGVAATVADARFAKPLDAELIVDLAMSHEVLVTVEEGSVGGFGA 589

Query: 656 HVSHFIALDGLLDSG-VKWRPIVLPDNYIEHASPTQQLALAGLTGHHI 702
            V H +   G+LD+G V+ R + LPD Y +H  P +  A AGL    I
Sbjct: 590 MVLHLLTERGVLDTGRVRVRTLTLPDVYQDHDKPEKMYAEAGLDAEGI 637


>gi|240141131|ref|YP_002965611.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacterium
           extorquens AM1]
 gi|240011108|gb|ACS42334.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacterium
           extorquens AM1]
          Length = 658

 Score =  532 bits (1370), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 305/648 (47%), Positives = 401/648 (61%), Gaps = 43/648 (6%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           T IL+ +E P RL+ L   EL+++A  +R+E+   VS T   L S L  VELTVALHHVF
Sbjct: 6   TTILEGLETPDRLRLLPESELQRVADAVRAEMIDAVSITGGHLGSGLGVVELTVALHHVF 65

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+I+WDVG Q Y HKILTGRR  I TLR+  G+SG+T RSESEYDPF A H   S+
Sbjct: 66  DTPDDRIVWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTKRSESEYDPFGAAHSSTSI 125

Query: 199 SAGLGMAVARDI-------KG----KRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIV 247
           SA LGMAVARD+       KG    KR  ++ VI +G+  AG AYEAM+NAG L S +IV
Sbjct: 126 SAALGMAVARDLEEADAKAKGGPAPKRRNMIAVIGDGSMSAGMAYEAMNNAGALHSRLIV 185

Query: 248 ILNDSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAA 307
           ILND+  S+ P         + A+S+ L+R+ S  ++R LRE AK + K + + +++ AA
Sbjct: 186 ILNDNDMSIAP--------PVGAMSAYLARLASGGTYRSLRETAKQLGKLLPKALYQRAA 237

Query: 308 KVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTE 367
             +EYAR +I   G T+FEE+G +Y+GPVDGHN++ L+ VL+ V      GP+L+HVVT+
Sbjct: 238 AAEEYARSLI-VGGGTMFEEMGFHYVGPVDGHNLDHLLPVLKNVRD-SDQGPILLHVVTQ 295

Query: 368 ENR----------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEK 417
           + +          R     K + +   Q  A  +        +  Y   F E+L+  A+ 
Sbjct: 296 KGKGYAPAEASADRYHGVVKFDVVSGVQAKAKAN--------APAYTRVFGESLIKAADA 347

Query: 418 DKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAF 477
           D  +V + A M     + LF +  P+R FDVG+AEQHAVTF+ GLA  G KPF  I S F
Sbjct: 348 DPKVVAITAAMPGGTGIDLFGKAHPDRTFDVGIAEQHAVTFAGGLATEGYKPFVAIYSTF 407

Query: 478 LQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDED 537
           LQRAYDQVV+DV  Q L VRF +  AGLVG+DG T  GAFD+ ++ CLPNM VMA +DE 
Sbjct: 408 LQRAYDQVVHDVALQNLAVRFCLDRAGLVGADGATHAGAFDLAYLCCLPNMTVMAAADEA 467

Query: 538 ELVDMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVL--VEGKDVALLGY 595
           ELV MVAT    D  P+  RYPRG  V  +LP   G+P+ IG+G+V+   EG  VALL  
Sbjct: 468 ELVHMVATCHVHDSGPIALRYPRGEGVGIELP-ETGVPLAIGRGRVVRRPEGARVALLSL 526

Query: 596 GAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGS 655
           G  +   LKA   L   G+  TVADARF KPLD +L+ +L  +H  L+TVEEGS+GGFG+
Sbjct: 527 GTRLSEALKAADALEAEGVAATVADARFAKPLDAELIVDLAMSHEVLVTVEEGSVGGFGA 586

Query: 656 HVSHFIALDGLLDSG-VKWRPIVLPDNYIEHASPTQQLALAGLTGHHI 702
            V H +A  G+LD+G V+ R + LPD Y +H  P +  A AGL    I
Sbjct: 587 MVLHLLAERGVLDTGRVRVRTLTLPDLYQDHDKPEKMYAEAGLDAEGI 634


>gi|357027710|ref|ZP_09089776.1| 1-deoxy-D-xylulose-5-phosphate synthase, partial [Mesorhizobium
           amorphae CCNWGS0123]
 gi|355540411|gb|EHH09621.1| 1-deoxy-D-xylulose-5-phosphate synthase, partial [Mesorhizobium
           amorphae CCNWGS0123]
          Length = 571

 Score =  532 bits (1370), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 280/565 (49%), Positives = 363/565 (64%), Gaps = 20/565 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V  P  L++L   +L QLA E+R+EL   VS T   L + L  VELTVALH+VF
Sbjct: 22  TPLLDKVRIPADLRTLDEGQLPQLASELRAELIDAVSHTGGHLGAGLGVVELTVALHYVF 81

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+++WDVG Q Y HKILTGRR  I TLR++ G+SG+T R+ESEYDPF A H   S+
Sbjct: 82  NTPDDRLIWDVGHQAYPHKILTGRRDRIRTLRQEGGLSGFTRRAESEYDPFGAAHSSTSI 141

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMA+ARD+ G R  ++ VI +G   AG AYEAM+NAG LD+ +IVILND+  S+ P
Sbjct: 142 SAGLGMAMARDLSGGRNNVIAVIGDGAMSAGMAYEAMNNAGALDARLIVILNDNDMSIAP 201

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                      A+S+ L+R+ S +++  LR+  K +T  +G+       +  E+ARG + 
Sbjct: 202 P--------TGAMSAYLARLASGRTYLGLRDFGKKLTSYLGKRADRAITRAVEHARGYV- 252

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G TLFEELG Y+IGP+DGHN+E LI VL+ V   G  GPVL+HVVT++ +       +
Sbjct: 253 -TGGTLFEELGFYHIGPIDGHNLEHLIPVLKNVRDNGD-GPVLIHVVTQKGK---GYGPA 307

Query: 379 EAIEKQQEGASDSNSLPFGNY-----SRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
           EA   +  G +  + +          + +Y   F E+LV E  +D  IV V A M     
Sbjct: 308 EAAADKYHGVNKFDVITGAQAKAPANAPSYTKVFAESLVQEGREDDRIVAVTAAMPNGTG 367

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L LF E FP R FDVG+AEQHAVTF+AGLA  G KPF  I S FLQRAYDQVV+DV  Q+
Sbjct: 368 LDLFGEAFPSRTFDVGIAEQHAVTFAAGLATEGYKPFAAIYSTFLQRAYDQVVHDVAIQK 427

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPVRF I  AG VG+DG T CGAFD TF++ LP  +VMA +DE EL  MV T A  DD P
Sbjct: 428 LPVRFPIDRAGFVGADGATHCGAFDTTFLATLPGFVVMAAADEAELRHMVRTAAHYDDGP 487

Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
           + FRYPRG  V  ++P  RG  +EIG+G+++ EG  VALL +G  +Q+CL A   L   G
Sbjct: 488 IAFRYPRGNGVGVEMP-ERGSVLEIGRGRIVREGTKVALLSFGTRLQDCLLAAEELGAAG 546

Query: 614 IDVTVADARFCKPLDIKLVRELCQN 638
           +  TVADARF KPLD  L+R L ++
Sbjct: 547 LSTTVADARFAKPLDEDLIRRLARS 571


>gi|341613385|ref|ZP_08700254.1| 1-deoxy-D-xylulose-5-phosphate synthase [Citromicrobium sp.
           JLT1363]
          Length = 632

 Score =  532 bits (1370), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 285/634 (44%), Positives = 383/634 (60%), Gaps = 18/634 (2%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +LD V  P  L+ +   +L+QLA E+R+E+   V  T   L S L  VELTVA+H++F+ 
Sbjct: 1   MLDTVNLPADLRKIDRDKLRQLADELRTEMIDAVGTTGGHLGSGLGVVELTVAIHYIFNT 60

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+++WDVG Q Y HKILTGRR  I TLR+  G+SG+T RSESEYDPF A H   S+SA
Sbjct: 61  PEDRLIWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTKRSESEYDPFGAAHSSTSISA 120

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKI 260
           G+G A+A  ++ K    + VI +G   AG AYEAM+NA    + ++VILND+  S+ P  
Sbjct: 121 GIGFAMANRLQDKPGRAIAVIGDGAMSAGMAYEAMNNAEQAGNRLVVILNDNDMSIAP-- 178

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQ 320
                  +  LS+ L+R+ SS  +  LR +A  + K++ R +H    K +E+ RGM+   
Sbjct: 179 ------PVGGLSAYLARVVSSGEYLGLRSLASKVAKKMHRRIHSSLGKAEEFTRGMV--T 230

Query: 321 GSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR----RAEDTQ 376
           G TLFEELG YY+GP+DGHN++ LI VL+ V      GPVL+HVVTE+ +      E   
Sbjct: 231 GGTLFEELGFYYVGPIDGHNLDHLIPVLENVRD-SDQGPVLIHVVTEKGKGYKFAEESAD 289

Query: 377 KSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQL 436
           K   + K      +      G     Y + F E L   AE D  I  + A M     +  
Sbjct: 290 KYHGVSKFDVITGEQKKSKGG--PPNYQNVFGETLAKLAETDTRICAITAAMPGGTGVDK 347

Query: 437 FQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPV 496
           F +  PER FDVG+AEQH VTF+AGLA  G++PF  I S FLQRAYDQVV+DV  Q LPV
Sbjct: 348 FAKAHPERSFDVGIAEQHGVTFAAGLAAQGMRPFAAIYSTFLQRAYDQVVHDVAIQNLPV 407

Query: 497 RFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCF 556
           RF I  AGLVG+DG T  G+FDIT+++ LPN +VMA SDE EL  M  T A  D+ P+ F
Sbjct: 408 RFAIDRAGLVGADGATHAGSFDITYLATLPNFVVMAASDEAELAHMTYTAAEYDEGPIAF 467

Query: 557 RYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDV 616
           RYPRGA    ++P  +   +EIGKG+++ EG  VA+L  G  +   L+A   L   G+  
Sbjct: 468 RYPRGAGTGVEIP-EKLQKLEIGKGRIVKEGSKVAILSLGTRLGEALEAAEQLEARGLST 526

Query: 617 TVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWRPI 676
           TVAD RF KPLD  L+ +  + H  ++T+EEG+IGG G+HV  + +  GLLD G+K R +
Sbjct: 527 TVADMRFAKPLDTALIEKAMREHEVVLTIEEGAIGGIGAHVLTYASDSGLLDEGLKVRTM 586

Query: 677 VLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
            LPD + +   P +Q   AGL   HI  T L+ L
Sbjct: 587 RLPDIFQDQDDPKKQYDEAGLNAPHILDTVLAAL 620


>gi|329851865|ref|ZP_08266546.1| 1-deoxy-D-xylulose-5-phosphate synthase [Asticcacaulis biprosthecum
           C19]
 gi|328839714|gb|EGF89287.1| 1-deoxy-D-xylulose-5-phosphate synthase [Asticcacaulis biprosthecum
           C19]
          Length = 639

 Score =  531 bits (1369), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 297/638 (46%), Positives = 394/638 (61%), Gaps = 20/638 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD  + P  ++ L+  ++K LA E+R+E   +VSKT   L S+L  VELTVALHH F
Sbjct: 5   TPVLDSFQTPQDIRRLSPTQVKALADEVRAETIDVVSKTGGHLGSALGVVELTVALHHTF 64

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D ++WDVG Q Y HKILTGRR  I +LR+  G+SG+T RSES YDPF A H   S+
Sbjct: 65  ETPRDILIWDVGHQCYPHKILTGRRDRIRSLRQGGGLSGFTKRSESPYDPFGAAHAATSI 124

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LG   ARD KG+   ++ VI +G+  AG AYEAM+NA     N+ VILND+  S+ P
Sbjct: 125 SAALGFCAARDQKGEDHKVIAVIGDGSMSAGMAYEAMNNAAETTRNLTVILNDNDMSIAP 184

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                    +  +S+ L+ + S  +++ +R   K + +R+ R + E   K +E++R  + 
Sbjct: 185 --------PVGGMSAYLANLVSGGAYQAVRRWGKSVAERLPRSIFELVRKSEEFSRTYV- 235

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
             G T FEELG YY+GP+DGHN+E L  VL+ V  +    PVLVHVVT++ +  E  +  
Sbjct: 236 -TGGTFFEELGFYYVGPIDGHNMEHLCQVLRRVREIRDR-PVLVHVVTQKGKGYEPAEN- 292

Query: 379 EAIEKQQEGA-----SDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
            A +K    A     +   S P  N + +Y + F   L+ +A +D  IV + A M     
Sbjct: 293 -AADKYHGVAKFDVITGEQSKPKSN-APSYTEVFASELIKQARRDDRIVAITAAMPSGTG 350

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L  F E FP R +DVG+AEQHAVTF+AGLA  G+KPFC I S FLQR YDQV +DV  Q 
Sbjct: 351 LDRFAEVFPTRCYDVGIAEQHAVTFAAGLAAEGMKPFCAIYSTFLQRGYDQVAHDVSLQN 410

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPVRF I  AGLVG+DG T  GAFDI ++  LP M++MA SDE EL  M+AT  + DD P
Sbjct: 411 LPVRFAIDRAGLVGADGATHAGAFDIGYLGALPQMMIMAASDEAELAAMIATATAYDDGP 470

Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
             FRYPRG  V   +P     P+ IGKG+++ EG  VA+L  GA +Q  LKA  +L+  G
Sbjct: 471 SAFRYPRGDGVGVTIPDV-AQPLAIGKGRIVREGSKVAILSLGARLQEALKAADMLAARG 529

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKW 673
           +  TVADARF KPLD  L+ +L ++H  LITVEEGS+GGFG  V H++A +G LD+ +K 
Sbjct: 530 LSTTVADARFAKPLDKDLILQLARHHECLITVEEGSVGGFGGFVLHYLAGEGALDNALKI 589

Query: 674 RPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
           R + LPD Y +  S T Q A AGL    I  TA+  LG
Sbjct: 590 RTLTLPDVYQDQDSQTNQYAEAGLDAAGIVLTAVRALG 627


>gi|219114431|ref|XP_002176386.1| precursor of synthase DXS 1-deoxy-d-xylulose-5-phosphate synthase
           [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217402632|gb|EEC42622.1| precursor of synthase DXS 1-deoxy-d-xylulose-5-phosphate synthase
           [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 730

 Score =  531 bits (1368), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 302/675 (44%), Positives = 398/675 (58%), Gaps = 48/675 (7%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           PILD V+ P  +K+L +++LKQLA E+R E+   VSKT   L SSL   ELTVALH+VF 
Sbjct: 54  PILDSVKYPSDMKNLDMRQLKQLANELRWEVLESVSKTGGHLSSSLGVNELTVALHYVFD 113

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D I+WDV  Q Y HKILTGRR  + TLR+  GISG+  R ESEYD F AGH   S+S
Sbjct: 114 MPEDDIIWDVSHQCYPHKILTGRRDRMSTLRQSGGISGFCKRKESEYDSFGAGHSSTSIS 173

Query: 200 AGLGMAVARDIKGKRE--CIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLH 257
              GM++ + I  KR+  CI  VI +G    G AYEAM++AGYL + MIVILND+     
Sbjct: 174 VAQGMSIGKSILNKRQNNCIA-VIGDGAITGGMAYEAMNSAGYLKNRMIVILNDNGQVSL 232

Query: 258 PKIEESPKTSINA--LSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARG 315
           P    S    + A  LS+  S +  SK F+  R  AK   K +  G+ +   ++DEYARG
Sbjct: 233 PTGTPSAGGIVPASQLSTYTSNLLVSKPFQDFRMFAKNFNKLLPEGVQDVNKRIDEYARG 292

Query: 316 MIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN------ 369
           ++   G TLFEELG +Y+GPVDGH++++LI +L+++    S  PVL+HV T +       
Sbjct: 293 IVA--GGTLFEELGFFYVGPVDGHDLDNLIPILEKLRDSPSTKPVLLHVKTTKGYGYPPA 350

Query: 370 RRAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGME 429
            +A D     A      G    +  P    + +    F  AL+  A +D+ IV + A M 
Sbjct: 351 EQASDRMHGVAKFNLGTGKQIKSKKPI---APSLTSIFANALIDAATEDRSIVGITAAMP 407

Query: 430 MDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDV 489
               + +F  +FP+R FDVG+AEQHAVT  AG+AC GLKPF  I S F+QR YDQVV+DV
Sbjct: 408 GGTGMDIFGRRFPKRTFDVGIAEQHAVTMGAGMACEGLKPFVCIYSTFMQRGYDQVVHDV 467

Query: 490 DQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASI 549
             Q LPVR V+  AGLVG+DGPT  G +D+++M C+PN+I+MAPSDE EL +MVAT A+ 
Sbjct: 468 AIQNLPVRMVLDRAGLVGNDGPTHHGCYDLSYMGCIPNLIIMAPSDEVELRNMVATQAAF 527

Query: 550 DDRPVCFRYPRGA-------------IVRTDLPGYRGIPIEIGKGKVL------------ 584
           +D P   RYPRG                  D    +G  + IGKG+++            
Sbjct: 528 NDGPTVLRYPRGTGYGLETLKNTFGYTFEGDEIPTKGEVLPIGKGRIVRRPGGFNQNQSS 587

Query: 585 VEGKD----VALLGYGAMVQNCLKARALLSKLG--IDVTVADARFCKPLDIKLVRELCQN 638
             GK     VA+L  G  +   L A   +  +   + VTVAD RF KPLD+ LVREL   
Sbjct: 588 TRGKSRKDRVAVLSLGTRLHEALVAAKEVEDIDPTLGVTVADGRFMKPLDVDLVRELADE 647

Query: 639 HTFLITVEEGSIGGFGSHVSHFIALDGLLDSG-VKWRPIVLPDNYIEHASPTQQLALAGL 697
           H+ LIT+EEGSIGGFG HV HF++LDG+LD G +K+RP+V+PD   E  +  +Q   AGL
Sbjct: 648 HSVLITIEEGSIGGFGDHVLHFLSLDGILDDGELKFRPMVIPDTLFEAGTQYEQYEQAGL 707

Query: 698 TGHHIAATALSLLGR 712
              HI  T L L  R
Sbjct: 708 NSEHIRGTILRLTKR 722


>gi|393723890|ref|ZP_10343817.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingomonas sp. PAMC
           26605]
          Length = 641

 Score =  531 bits (1368), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 294/638 (46%), Positives = 386/638 (60%), Gaps = 22/638 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V  P  L++L   +L+QLA E+R E  + V  T   L S L  VELTVA+H+VF
Sbjct: 7   TPLLDTVNIPADLRTLAPTQLRQLADELRQETIAAVGMTGGHLGSGLGVVELTVAIHYVF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P DK++WDVG Q Y HKILTGRR  I TLR   G+SG+T RSESEYDPF A H   S+
Sbjct: 67  DTPNDKLVWDVGHQCYPHKILTGRRDRIRTLRMGGGLSGFTKRSESEYDPFGAAHSSTSI 126

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LG  VA  I  K    + VI +G   AG AYEAM+NA    + ++VILND+  S+ P
Sbjct: 127 SAALGFGVANKIADKPGKGIAVIGDGAMSAGMAYEAMNNAAQAGNRLVVILNDNDMSIAP 186

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                    +  LS+ LSRI SS+ F   R++A+ + KR+ + + +   K +E+ARGM  
Sbjct: 187 --------PVGGLSAYLSRIVSSREFLGFRDLARKLAKRLPKPIADGMRKTEEFARGMA- 237

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQ-- 376
             G TLFEELG YY+GP+DGHN++ LI VL+ V      GP+LVHVVT++ +     +  
Sbjct: 238 -MGGTLFEELGFYYVGPIDGHNLDQLIPVLENVRD-AEEGPILVHVVTKKGKGYAPAEAA 295

Query: 377 --KSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
             K   ++K    +      P G     Y + F   L  EAE D  I  + A M     L
Sbjct: 296 ADKYHGVQKFDVISGVQTKAPPG--PPQYQNVFGAQLSKEAETDPRICAITAAMPSGTGL 353

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F +  PER+FDVG+AEQHAVTF+AGLA  G++PFC I S FLQRAYDQVV+DV  Q L
Sbjct: 354 DAFAKAHPERFFDVGIAEQHAVTFAAGLAAQGMRPFCAIYSTFLQRAYDQVVHDVCIQNL 413

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PVRF I  AGLVG+DG T  G+FD+ +++ LPNM+VMAP+DE ELV M  T    D  P+
Sbjct: 414 PVRFAIDRAGLVGADGATHAGSFDLAYLATLPNMVVMAPADEAELVHMTHTAILHDSGPI 473

Query: 555 CFRYPRGAIVRTDLPGYRGIP--IEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
             RYPRG     +LP    +P  +EIGKG+++ +G  VA+L  G  ++  L+A   L   
Sbjct: 474 AVRYPRGNGTGVELP---VVPEALEIGKGRIVRQGHKVAILSLGTRLEEALRAAEALEAK 530

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 672
           G+  TVAD RF KPLD  L+R+L   H   +T+EEG++GG G+HV  F +  GL+D+G+K
Sbjct: 531 GLSTTVADLRFAKPLDEDLIRKLLTTHEVAVTIEEGAVGGLGAHVLTFASDSGLIDAGLK 590

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
            R + LPD + +   P  Q A AGL    I  T L  L
Sbjct: 591 LRTMRLPDIFQDQDKPELQYAQAGLDADAIVETVLKAL 628


>gi|21328654|gb|AAM48660.1| deoxyxylulose-5-phosphate synthase [uncultured marine
           proteobacterium]
          Length = 630

 Score =  531 bits (1367), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 290/636 (45%), Positives = 390/636 (61%), Gaps = 18/636 (2%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +LD +  P  LK+L+ ++L QLA E+R ++   VS+T   L SSL  VELTVALH VF  
Sbjct: 4   LLDEITAPSDLKTLSDQQLAQLADELRVDVIEAVSRTGGHLGSSLGVVELTVALHAVFDT 63

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P DK++WDVG Q Y HK+LTGRR+ + TLR++ G+SG+T RSES YDPF A H   S+SA
Sbjct: 64  PKDKLIWDVGHQCYPHKVLTGRRAGMGTLRQEGGLSGFTKRSESPYDPFGAAHSSTSISA 123

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKI 260
             G  VARD+       + VI +G+  AG AYEA++NAG     M VILND+  S+ P +
Sbjct: 124 AHGFTVARDLGQDTGDAIAVIGDGSISAGMAYEALNNAGAEGRRMFVILNDNEMSIAPPV 183

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQ 320
                    A+S  +S + +  +  QL    + +   +   M + A +  E   G +  Q
Sbjct: 184 --------GAMSKYMSGL-AGTALAQLNAFGQDIETVLPGPMRDHARRARELVTGAVASQ 234

Query: 321 GSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRR---AEDT-Q 376
           G T+FEELG  YIGP+DGH++  L+SVL+  A   + GPVL+H  T + +    AE +  
Sbjct: 235 G-TIFEELGFEYIGPIDGHDMSQLLSVLRS-ARTRAKGPVLIHCCTVKGKGYAPAETSAD 292

Query: 377 KSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQL 436
           K   + K     +    +  G  + +Y   F + L   AEKD  IV + A M     L +
Sbjct: 293 KYHGVAKFD--VASGAQMKSGANAPSYTTVFGQTLTKLAEKDSKIVGITAAMPSGTGLDI 350

Query: 437 FQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPV 496
           F ++F +R FDVG+AEQH VTF+AGLA  GLKPFC I S FLQR YDQ+V+DV  Q LPV
Sbjct: 351 FAQRFADRMFDVGIAEQHGVTFAAGLAASGLKPFCAIYSTFLQRGYDQIVHDVALQNLPV 410

Query: 497 RFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCF 556
           RF I  AGLVG+DG T  GAFDI F++ LPNM+VMA +DE ELV M+ T A+ D  P+ F
Sbjct: 411 RFAIDRAGLVGADGATHAGAFDIGFLTALPNMVVMAAADEAELVHMITTAAAHDTGPIAF 470

Query: 557 RYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDV 616
           RYPRG      +P   G  ++IGKG+++  G ++ALL +G  +   LKA  L+S  G+D 
Sbjct: 471 RYPRGTGTGVSIP-QEGELLQIGKGRIVRPGAEIALLSFGGHLAEALKAADLISAQGVDA 529

Query: 617 TVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWRPI 676
           TVADARF KPLD  L+ +L + H  LIT+E+G+ GGFG+ V H++A  GLLD  +  R +
Sbjct: 530 TVADARFAKPLDHALISKLAKTHKVLITIEQGAQGGFGAMVLHYLADTGLLDGPLAVRSM 589

Query: 677 VLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
            LPD +I+ A+P    A AGLT   IAATAL  L R
Sbjct: 590 TLPDRFIDQAAPDAMYADAGLTATDIAATALQALKR 625


>gi|255261415|ref|ZP_05340757.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thalassiobium sp. R2A62]
 gi|255103750|gb|EET46424.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thalassiobium sp. R2A62]
          Length = 619

 Score =  530 bits (1366), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 291/640 (45%), Positives = 393/640 (61%), Gaps = 29/640 (4%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           T ILD +  P  LK L+  +L QLA E+R+E+   V+ T   L SSL  VELTVALH VF
Sbjct: 2   TSILDNIAGPSDLKGLSDPDLSQLADELRTEVIEAVATTGGHLGSSLGVVELTVALHAVF 61

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P DK++WDVG Q Y HK+LTGRR+ + TLR++ GISG+T R+ES++DPF A H   S+
Sbjct: 62  DTPRDKLIWDVGHQCYPHKVLTGRRAQMKTLRQEGGISGFTKRTESDFDPFGAAHSSTSI 121

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LG  VARD+       V +I +G+  AG AYEAM+NAG     M VILND+  S+ P
Sbjct: 122 SAALGFTVARDMGQPTGDAVAIIGDGSISAGMAYEAMNNAGAEGRRMFVILNDNEMSIAP 181

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
            +         A+S  +SR+  +            +   +   + + A +  E   G   
Sbjct: 182 PV--------GAMSQYMSRLADTP-----------LGAALPGPLRDHARRARELVTGRTT 222

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRR---AEDT 375
             G T+FEELG  Y+GP++GH+++ L++VL+ V +  + GPVL+H  T + +    AE++
Sbjct: 223 SSG-TMFEELGFEYVGPINGHDMDQLLAVLRSVRTRAT-GPVLIHCCTVKGKGYAPAENS 280

Query: 376 -QKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
             K   + K     S       G+ + +Y   F  AL   A +D  IV + A M     +
Sbjct: 281 ADKYHGVSKFD--VSSGAQAKSGSNAPSYTSVFGHALTRIAARDSKIVGITAAMPSGTGM 338

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
            +F + FP R FDVG+AEQH VTF+AGLA GGLKPFC I S FLQR YDQ+V+DV  Q L
Sbjct: 339 DIFADAFPRRVFDVGIAEQHGVTFAAGLAAGGLKPFCAIYSTFLQRGYDQIVHDVALQNL 398

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PVRF I  AGLVG+DG T  GAFD+ ++S LPNM VMA SDE ELV MVAT  + D  P+
Sbjct: 399 PVRFAIDRAGLVGADGATHAGAFDVGYLSALPNMTVMAASDEAELVHMVATAVAHDAGPI 458

Query: 555 CFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGI 614
            FRYPRG      +P   G  +EIGKG+V+ EG DVA+L +GA +   LK+  +++  G+
Sbjct: 459 AFRYPRGTGTGAAVPDL-GEVLEIGKGRVVREGADVAILSFGAHLSESLKSADMMAAQGV 517

Query: 615 DVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWR 674
             TVADARF KPLD  L+R+L ++H  LIT+E+GS GGFG+ V H++A +GLLD  +  R
Sbjct: 518 TATVADARFAKPLDHALIRQLVKHHKALITIEQGSQGGFGAMVLHYMAGEGLLDGDIAVR 577

Query: 675 PIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTR 714
            + LPD +I+ A+P    A AGLT   IAATA+  + +TR
Sbjct: 578 TMTLPDRFIDQAAPDAMYADAGLTATDIAATAIQAV-KTR 616


>gi|188584012|ref|YP_001927457.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacterium populi
           BJ001]
 gi|179347510|gb|ACB82922.1| deoxyxylulose-5-phosphate synthase [Methylobacterium populi BJ001]
          Length = 658

 Score =  529 bits (1363), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 301/648 (46%), Positives = 400/648 (61%), Gaps = 43/648 (6%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           T IL+ +E P RL+ L   EL+++A  +R+E+   VS T   L S L  VELTVALHHVF
Sbjct: 6   TTILEGLETPDRLRLLPESELQRVADAVRAEMIDAVSITGGHLGSGLGVVELTVALHHVF 65

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+I+WDVG Q Y HKILTGRR  I TLR+  G+SG+T RSES YDPF A H   S+
Sbjct: 66  DTPDDRIVWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTKRSESVYDPFGAAHSSTSI 125

Query: 199 SAGLGMAVARDIK-----------GKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIV 247
           SA LGMAVARD+            GKR  ++ VI +G+  AG AYEAM+NAG L S +IV
Sbjct: 126 SAALGMAVARDLDDAEARAKGEAPGKRRNMIAVIGDGSMSAGMAYEAMNNAGALHSRLIV 185

Query: 248 ILNDSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAA 307
           ILND+  S+ P +         A+S+ L+R+ S  ++R LRE AK + K + + +++ AA
Sbjct: 186 ILNDNDMSIAPPV--------GAMSAYLARLASGGTYRSLRETAKQLGKLLPKALYQRAA 237

Query: 308 KVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTE 367
             +EYAR +I   G T+FEE+G +Y+GPVDGHN++ L+ VL+ V      GP+L+HVVT+
Sbjct: 238 AAEEYARSLI-VGGGTMFEEMGFHYVGPVDGHNLDHLLPVLKNVRD-SDQGPILLHVVTQ 295

Query: 368 ENR----------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEK 417
           + +          R     K + +   Q  A  +        +  Y   F E+L+  A+ 
Sbjct: 296 KGKGYAPAEASADRYHGVVKFDVVSGVQAKAKAN--------APAYTRVFGESLIKAADA 347

Query: 418 DKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAF 477
           D  +V + A M     + LF +  P++ FDVG+AEQHAVTF+ GLA  G KPF  I S F
Sbjct: 348 DPKVVAITAAMPGGTGIDLFGKAHPDKTFDVGIAEQHAVTFAGGLATEGYKPFVAIYSTF 407

Query: 478 LQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDED 537
           LQRAYDQVV+DV  Q L VRF +  AGLVG+DG T  GAFD+ ++ CLPNM VMA +DE 
Sbjct: 408 LQRAYDQVVHDVALQNLAVRFCLDRAGLVGADGATHAGAFDLAYLCCLPNMTVMAAADEA 467

Query: 538 ELVDMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVL--VEGKDVALLGY 595
           ELV MVAT  + D  P+  RYPRG  V  +LP   G P+ IG+G+V+   EG  VALL  
Sbjct: 468 ELVHMVATAHAHDSGPIALRYPRGEGVGVELP-ESGEPLAIGRGRVVRRPEGARVALLSL 526

Query: 596 GAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGS 655
           G  +   LKA   L   G+ V+VADARF KPLD +L+ +L  +H  L+TVEEGS+GGFG+
Sbjct: 527 GTRLSEALKAADALEAEGVAVSVADARFAKPLDAELIVDLANSHEVLVTVEEGSVGGFGA 586

Query: 656 HVSHFIALDGLLDSG-VKWRPIVLPDNYIEHASPTQQLALAGLTGHHI 702
            V H ++  G+LD+G V+ R + LPD Y +H  P +  A AGL    I
Sbjct: 587 MVLHLLSERGVLDAGRVRVRTLTLPDVYQDHDKPEKMYAEAGLDAEGI 634


>gi|410687145|ref|YP_006965280.1| 1-deoxy-D-xylulose-5-phosphate synthase 1 [Sulfitobacter
           guttiformis]
 gi|399920087|gb|AFP55491.1| 1-deoxy-D-xylulose-5-phosphate synthase 1 [Sulfitobacter
           guttiformis]
          Length = 630

 Score =  529 bits (1362), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 295/635 (46%), Positives = 381/635 (60%), Gaps = 34/635 (5%)

Query: 76  KEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALH 135
           + PTP LD V  P  +K+LT  EL+ LA E+R E+   V+ T   L SSL  VELTVALH
Sbjct: 2   RSPTPQLDRVSAPSDMKALTDAELRILADELREEVIETVATTGGHLGSSLGVVELTVALH 61

Query: 136 HVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGC 195
            VF  P DK++WDVG Q Y HKILTGRR  +HTLR++ G+SG+T RSESE+DPF A H  
Sbjct: 62  AVFDTPRDKVIWDVGHQCYPHKILTGRRHKMHTLRQEGGLSGFTKRSESEFDPFGAAHSS 121

Query: 196 NSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHS 255
            S+SA LG  VARD+       + VI +G+  AG AYEAM+NAG +   M VILND+  S
Sbjct: 122 TSISAALGFTVARDMGEATGDAIAVIGDGSISAGMAYEAMNNAGAMGRRMFVILNDNEMS 181

Query: 256 LHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARG 315
           + P +              +SR  S      L E A G    +   + + A +  +   G
Sbjct: 182 IAPPV------------GAMSRYMSG-----LTEFANGTLAALPGPLRDHARRARQLVTG 224

Query: 316 MIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDT 375
            +  Q STLFE LG  YIGP+DGH++  L+ VL+  A   + GPVL+H  T + +     
Sbjct: 225 AVEEQ-STLFENLGFQYIGPIDGHDMGQLLGVLR-AARTRATGPVLIHCCTVKGK---GY 279

Query: 376 QKSEAIEKQQEGAS--------DSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAG 427
             +EA      G           + S P    + +Y + F +AL  EA +D  IV + A 
Sbjct: 280 APAEAASDSYHGVGKFDPVTGIQAKSKP---NAPSYTEIFGKALTEEARRDPKIVAITAA 336

Query: 428 MEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVN 487
           M     L +F +  P R FDVG+AEQH VTF+AG+A GGLKPF  I S+FLQR YDQ+V+
Sbjct: 337 MPGGTGLDIFAKTHPNRMFDVGIAEQHGVTFAAGVAAGGLKPFVAIYSSFLQRGYDQIVH 396

Query: 488 DVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVA 547
           DV  Q LPVRF I  AGLVG+DG T  GAFDI ++  LPNM+VMA SDE ELV MVAT A
Sbjct: 397 DVALQNLPVRFAIDRAGLVGADGATHAGAFDIGYLVALPNMVVMAASDEAELVHMVATAA 456

Query: 548 SIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARA 607
           + DD P+ FRYPRG      LP  RG+P+EIGKG ++ +G DVA+L +GA +    +A  
Sbjct: 457 AYDDGPIAFRYPRGEGEGVTLP-ERGVPLEIGKGVIVRQGFDVAILSFGAHLGESQRAAD 515

Query: 608 LLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLL 667
           L+   G+ VTVADARF KPLD  L+ +L + H  LITVE+GS GGFGS V   +A +G L
Sbjct: 516 LIEAQGLTVTVADARFAKPLDKALINQLARKHRVLITVEQGSRGGFGSMVLDHLANEGWL 575

Query: 668 DSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHI 702
           D  +  R + LPD +I+ A+P    A AG+T   I
Sbjct: 576 DKTLAVRTVNLPDRFIDQAAPDAMYADAGMTAGDI 610


>gi|294676253|ref|YP_003576868.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacter capsulatus SB
           1003]
 gi|141323|sp|P26242.1|DXS_RHOCA RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|46140|emb|CAA77557.1| 641 aa (68 kD) gene product of ORF641 [Rhodobacter capsulatus]
 gi|294475073|gb|ADE84461.1| 1-deoxy-D-xylulose-5-phosphate synthase-1 [Rhodobacter capsulatus
           SB 1003]
          Length = 641

 Score =  528 bits (1361), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 291/638 (45%), Positives = 392/638 (61%), Gaps = 26/638 (4%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP LD V  P  LK+++I +L  LA E+R E+  +VS+T   L SSL  VELTVALH VF
Sbjct: 8   TPHLDRVTGPADLKAMSIADLTALASEVRREIVEVVSQTGGHLGSSLGVVELTVALHAVF 67

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           ++P DK++WDVG Q Y HKILTGRRS + TLR+  GISG+  RSES +D F AGH   S+
Sbjct: 68  NSPGDKLIWDVGHQCYPHKILTGRRSRMLTLRQAGGISGFPKRSESPHDAFGAGHSSTSI 127

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LG AV R++       + +I +G+  AG AYEA+++AG+L S M VILND+  S+ P
Sbjct: 128 SAALGFAVGRELGQPVGDTIAIIGDGSITAGMAYEALNHAGHLKSRMFVILNDNDMSIAP 187

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                    + AL   L+ I     F  L+  A+G+   +   + + A +  +    M  
Sbjct: 188 P--------VGALQHYLNTIARQAPFAALKAAAEGIEMHLPGPVRDGARRARQMVTAM-- 237

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
           P G+TLFEELG  YIGPVDGH++ +L+  L+   +  S GPVL+HV T + +       +
Sbjct: 238 PGGATLFEELGFDYIGPVDGHDMAELVETLRVTRARAS-GPVLIHVCTTKGK---GYAPA 293

Query: 379 EAIEKQQEGAS--------DSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
           E  E +  G S           S+P    +  Y   F E L  EA +D+ IV V A M  
Sbjct: 294 EGAEDKLHGVSKFDIETGKQKKSIP---NAPNYTAVFGERLTEEAARDQAIVAVTAAMPT 350

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L + Q++FP R FDVG+AEQHAVTF+AG+A  GLKPF  + S+F+QR YDQ+V+DV 
Sbjct: 351 GTGLDIMQKRFPRRVFDVGIAEQHAVTFAAGMAAAGLKPFLALYSSFVQRGYDQLVHDVA 410

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q LPVR +I  AGLVG DG T  GAFD++ ++ LPN  VMA +DE EL  MV T A+ D
Sbjct: 411 LQNLPVRLMIDRAGLVGQDGATHAGAFDVSMLANLPNFTVMAAADEAELCHMVVTAAAHD 470

Query: 551 DRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLS 610
             P+  RYPRG     ++P  RG  +EIGKG+V+ EG +VA+L +GA +   LKA  +L 
Sbjct: 471 SGPIALRYPRGEGRGVEMP-ERGEVLEIGKGRVMTEGTEVAILSFGAHLAQALKAAEMLE 529

Query: 611 KLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSG 670
             G+  TVADARFC+PLD  L+  L + H  LIT+E+G++GGFG+ V H++A  G L+ G
Sbjct: 530 AEGVSTTVADARFCRPLDTDLIDRLIEGHAALITLEQGAMGGFGAMVLHYLARTGQLEKG 589

Query: 671 VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALS 708
              R + LPD YI+H SP +  A AGLT + I  TAL+
Sbjct: 590 RAIRTMTLPDCYIDHGSPEEMYAWAGLTANDIRDTALA 627


>gi|422294553|gb|EKU21853.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nannochloropsis gaditana
           CCMP526]
          Length = 842

 Score =  525 bits (1351), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 298/677 (44%), Positives = 406/677 (59%), Gaps = 44/677 (6%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+LD V  P  +K   +K+LKQLA E+R +    VSKT   L SSL  +ELTVALH+VF+
Sbjct: 120 PLLDSVRYPHDMKRFDLKDLKQLAHELRWDTLHHVSKTGGHLGSSLGVIELTVALHYVFN 179

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+I+WDV  Q Y HKILTGRR  +H+LR+ +G+SG+  RSESEYD F AGH   S+S
Sbjct: 180 TPDDRIVWDVSHQVYPHKILTGRRDRMHSLRQTNGLSGFAKRSESEYDAFGAGHSSTSIS 239

Query: 200 AGLGMAVARDIKGKR-ECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           A LGM+V + +  KR    V VI +G    G A+EA++NAGYL S M+VILND+     P
Sbjct: 240 AALGMSVGKLLTNKRVNNCVAVIGDGAITGGMAFEALNNAGYLRSRMVVILNDNGQVSLP 299

Query: 259 KIEESPKTSI--NALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGM 316
               S    +   ALSS  SR+ SSK F+  R  AKG+ + +   + +  AK+DEYARG+
Sbjct: 300 TGTHSAGGVVPAGALSSYTSRLLSSKPFQDFRSFAKGLNRLMPSEIQDINAKLDEYARGL 359

Query: 317 IGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQ 376
           I  QG TLFEELG YYIGPVDGH++++L+ +L+ +    S  PVL+HV TE   +     
Sbjct: 360 I--QGGTLFEELGFYYIGPVDGHDLDNLVPILENLRDSPSTKPVLLHVKTE---KGYGYP 414

Query: 377 KSEAIEKQQEGA-----SDSNSLPFGNYSR--TYDDCFIEALVMEAEKDKDIVVVHAGME 429
            +E    +  G      S       GN     +    F  AL   A +D+ +V + A M 
Sbjct: 415 PAEVASDKYHGVAKFDVSTGRQFKGGNKGAPLSLTTTFANALCEIAAEDRTVVGITAAMP 474

Query: 430 MDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDV 489
               + +F ++FP+R FDVG+AEQHAVTF+AG+A  GLKPFC I S F+QR YDQV++DV
Sbjct: 475 GGTGMDIFGKRFPKRTFDVGIAEQHAVTFAAGMAIEGLKPFCCIYSTFMQRGYDQVIHDV 534

Query: 490 DQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASI 549
             Q+LPVR ++  AGLVG+DGPT  G+FD++++  LP++++MAPSDE EL++++ T    
Sbjct: 535 VIQKLPVRMILDRAGLVGNDGPTHHGSFDLSYLGALPDIVIMAPSDELELMNLLETAYET 594

Query: 550 DDRPVCFRYPRGA-----IVRTDLPGYRGIPIEIGKGKVLVEGKD--------------- 589
           +D P   RYPRGA      ++++L GY G+     +GK +  GK                
Sbjct: 595 NDLPSVVRYPRGAGYGLETLKSEL-GYEGLEELPKRGKAVARGKGRIIRRSAVVPSTAAP 653

Query: 590 ----VALLGYGAMVQNCLKARALLSK--LGIDVTVADARFCKPLDIKLVRELCQNHTFLI 643
               VALL  G  + + + A   + +   G+ VTVADARF KPLD ++V  L   H  LI
Sbjct: 654 GTCRVALLSVGTRLLDTVHAAKEIEENLPGVSVTVADARFVKPLDKEMVSSLAMEHDVLI 713

Query: 644 TVEEGSIGGFGSHVSHFIALDGLLDSG-VKWRPIVLPDNYIEHASPTQQLALAGLTGHHI 702
           TVEE S+GGFGS V  F+  +GLLD G ++ R +VLPD +IE    + Q   AGL   HI
Sbjct: 714 TVEENSVGGFGSFVQQFLLNEGLLDGGKLRLRSMVLPDRFIEAGPQSDQYDQAGLAARHI 773

Query: 703 AATALSLLGRTREALLL 719
                 L+ R RE  +L
Sbjct: 774 VEKVEGLV-RGREERML 789


>gi|229597238|ref|YP_001756649.2| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacterium
           radiotolerans JCM 2831]
          Length = 664

 Score =  523 bits (1348), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 304/657 (46%), Positives = 404/657 (61%), Gaps = 42/657 (6%)

Query: 77  EPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHH 136
           E + +LD V +P  L+ L   EL+ +A  +R+E+   VS T   L S L  VELTVALHH
Sbjct: 6   EQSALLDRVPSPSALRRLPESELQAVADAVRAEMIDAVSITGGHLGSGLGVVELTVALHH 65

Query: 137 VFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCN 196
           VF  P D+I+WDVG Q Y HKILT RR  I TLR+  G+SG+T RSES YDPF A H   
Sbjct: 66  VFDTPDDRIVWDVGHQCYPHKILTERRDRIRTLRQGGGLSGFTKRSESVYDPFGAAHSST 125

Query: 197 SVSAGLGMAVARDI-------KG---KRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMI 246
           S+SA LGMAVARD+       KG   KR   + VI +G+  AG AYEA++NAG L S +I
Sbjct: 126 SISAALGMAVARDLDNATAKQKGGAQKRRNAIAVIGDGSMSAGMAYEALNNAGALHSRLI 185

Query: 247 VILNDSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWA 306
           VILND+  S+ P +         A+S+ L+R+ S  +++ LRE AK + K + + +++ A
Sbjct: 186 VILNDNDMSIAPPV--------GAMSAYLARLASGGAYQSLRETAKQLGKLLPKALYQRA 237

Query: 307 AKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVT 366
           A  +EYAR ++   G T+FEE+G +Y+GPVDGHN++ L+ VL+ V      GP+L+HVVT
Sbjct: 238 AAAEEYARSLV-VGGGTMFEEMGFHYVGPVDGHNLDHLLPVLKNVRD-AEHGPILLHVVT 295

Query: 367 EENR----------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAE 416
           ++ +          R     K + +   Q  A  +        +  Y   F E+L+  A+
Sbjct: 296 QKGKGYAPAEASADRYHGVVKFDVVSGIQAKAKPN--------APAYTRVFGESLIKAAD 347

Query: 417 KDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSA 476
            D  +V + A M     + LF +  P++ FDVG+AEQHAVTF+ GLA  G +PF  I S 
Sbjct: 348 ADDKVVAITAAMPGGTGIDLFGKAHPDKTFDVGIAEQHAVTFAGGLATEGYRPFVAIYST 407

Query: 477 FLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDE 536
           FLQRAYDQVV+DV  Q LPVRF +  AGLVG+DG T  GAFD+ ++ CLPNM VMA +DE
Sbjct: 408 FLQRAYDQVVHDVALQNLPVRFCLDRAGLVGADGATHAGAFDLAYLCCLPNMTVMAAADE 467

Query: 537 DELVDMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKD--VALLG 594
            ELV MVAT  + D  P+  RYPRG  V  +LP  RG  + IGKG+V+    +  VALL 
Sbjct: 468 AELVHMVATAHAHDTGPIALRYPRGEGVGVELP-ERGEVLAIGKGRVVRRDAEARVALLS 526

Query: 595 YGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFG 654
            G  +   LKA   L++ G+ VTVADARF KPLD  L+ +L ++H  LITVEEGS GGFG
Sbjct: 527 LGTRLAEALKAADALAEQGVAVTVADARFAKPLDEALILDLARDHEVLITVEEGSRGGFG 586

Query: 655 SHVSHFIALDGLLDS-GVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
           + V H +A  G LD+ GV+ R + LPD Y +H SP +  A AGL    I  TAL+ L
Sbjct: 587 AMVLHLLAERGALDAGGVRVRTMTLPDAYQDHDSPEKMYAEAGLDAKTIVRTALATL 643


>gi|229597237|ref|YP_001756119.2| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacterium
           radiotolerans JCM 2831]
          Length = 656

 Score =  523 bits (1346), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 304/657 (46%), Positives = 403/657 (61%), Gaps = 42/657 (6%)

Query: 77  EPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHH 136
           E + +LD V +P  L+ L   EL+ +A  +R+E+   VS T   L S L  VELTVALHH
Sbjct: 6   EQSALLDRVPSPSALRRLPESELQAVADAVRAEMIDAVSITGGHLGSGLGVVELTVALHH 65

Query: 137 VFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCN 196
           VF  P D+I+WDVG Q Y HKILT RR  I TLR+  G+SG+T RSES YDPF A H   
Sbjct: 66  VFDTPDDRIVWDVGHQCYPHKILTERRDRIRTLRQGGGLSGFTKRSESVYDPFGAAHSST 125

Query: 197 SVSAGLGMAVARDI-------KG---KRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMI 246
           S+SA LGMAVARD+       KG   KR   + VI +G+  AG AYEA++NAG L S +I
Sbjct: 126 SISAALGMAVARDLDNATAKQKGGAQKRRNAIAVIGDGSMSAGMAYEALNNAGALHSRLI 185

Query: 247 VILNDSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWA 306
           VILND+  S+ P +         A+S+ L+R+ S  +++ LRE AK + K + + +++ A
Sbjct: 186 VILNDNDMSIAPPV--------GAMSAYLARLASGGAYQSLRETAKQLGKLLPKALYQRA 237

Query: 307 AKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVT 366
           A  +EYAR ++   G T+FEE+G +Y+GPVDGHN++ L+ VL+ V      GP+L+HVVT
Sbjct: 238 AAAEEYARSLV-VGGGTMFEEMGFHYVGPVDGHNLDHLLPVLKNVRD-AEHGPILLHVVT 295

Query: 367 EENR----------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAE 416
           ++ +          R     K + +   Q  A  +        +  Y   F E+L+  A+
Sbjct: 296 QKGKGYAPAEASADRYHGVVKFDVVSGIQAKAKPN--------APAYTRVFGESLIKAAD 347

Query: 417 KDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSA 476
            D  +V + A M     + LF +  P++ FDVG+AEQHAVTF+ GLA  G +PF  I S 
Sbjct: 348 ADDKVVAITAAMPGGTGIDLFGKAHPDKTFDVGIAEQHAVTFAGGLATEGYRPFVAIYST 407

Query: 477 FLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDE 536
           FLQRAYDQVV+DV  Q LPVRF +  AGLVG+DG T  GAFD+ ++ CLPNM VMA +DE
Sbjct: 408 FLQRAYDQVVHDVALQNLPVRFCLDRAGLVGADGATHAGAFDLAYLCCLPNMTVMAAADE 467

Query: 537 DELVDMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKD--VALLG 594
            ELV MVAT  + D  P+  RYPRG  V  +LP  RG  + IGKG+V+    +  VALL 
Sbjct: 468 AELVHMVATAHAHDTGPIALRYPRGEGVGVELP-ERGEVLAIGKGRVVRRDAEARVALLS 526

Query: 595 YGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFG 654
            G  +   LKA   L++ G+ VTVADARF KPLD  L+ +L ++H  LITVEEGS GGFG
Sbjct: 527 LGTRLAEALKAADALAEQGVAVTVADARFAKPLDEALILDLARDHEVLITVEEGSRGGFG 586

Query: 655 SHVSHFIALDGLLDS-GVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
           + V H +A  G LD+ GV+ R + LPD Y +H SP +  A AGL    I  TAL  L
Sbjct: 587 AMVLHLLAERGALDAGGVRVRTMTLPDAYQDHDSPEKMYAEAGLDAKTIVRTALDTL 643


>gi|393769991|ref|ZP_10358504.1| 1-deoxy-D-xylulose-5-phosphate synthase, partial [Methylobacterium
           sp. GXF4]
 gi|392724572|gb|EIZ81924.1| 1-deoxy-D-xylulose-5-phosphate synthase, partial [Methylobacterium
           sp. GXF4]
          Length = 628

 Score =  520 bits (1340), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 301/645 (46%), Positives = 397/645 (61%), Gaps = 38/645 (5%)

Query: 83  DLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPV 142
           D V  P  L+ L   EL+ +A  +R+E+   VS T   L S L  VELTVALHHVF  P 
Sbjct: 1   DRVPEPAALRQLPESELQAVADAVRAEMIDAVSITGGHLGSGLGVVELTVALHHVFDTPD 60

Query: 143 DKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGL 202
           D+I+WDVG Q Y HKILTGRR  I TLR+  G+SG+T RSES YDPF A H   S+SA L
Sbjct: 61  DRIVWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTKRSESVYDPFGAAHSSTSISAAL 120

Query: 203 GMAVARDI-------KG---KRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDS 252
           GMAVARD+       KG   KR   + VI +G+  AG AYEAM+NAG L S +IVILND+
Sbjct: 121 GMAVARDLDADAAKAKGRGVKRRNAIAVIGDGSMSAGMAYEAMNNAGALHSRLIVILNDN 180

Query: 253 RHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEY 312
             S+ P +         A+S  L+R+ S  +++ LRE AK + K + + +++ AA  +EY
Sbjct: 181 DMSIAPPV--------GAMSGYLARLASGGTYQSLRETAKQLGKLLPKALYQRAAAAEEY 232

Query: 313 ARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRA 372
           AR ++   G T+FEE+G +Y+GPVDGHN++ L+ VL+ V      GP+L+HVVT   R+ 
Sbjct: 233 ARSLV-VGGGTMFEEMGFHYVGPVDGHNLDQLLPVLKNVRD-AEHGPILLHVVT---RKG 287

Query: 373 EDTQKSEAIEKQQEG--------ASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVV 424
           +    +EA   +  G           + + P    +  Y   F E+L+  A+ D  +V +
Sbjct: 288 KGYAPAEASADRYHGVVKFDVVSGVQAKAKP---NAPAYTRVFGESLIKAADADDKVVAI 344

Query: 425 HAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQ 484
            A M     + LF +  P++ FDVG+AEQHAVTF+ GLA  G +PF  I S FLQRAYDQ
Sbjct: 345 TAAMPGGTGIDLFGKAHPDKTFDVGIAEQHAVTFAGGLATEGYRPFVAIYSTFLQRAYDQ 404

Query: 485 VVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVA 544
           VV+DV  Q LPVRF +  AGLVG+DG T  GAFD+ ++ CLPNM VMA +DE ELV MVA
Sbjct: 405 VVHDVALQNLPVRFCLDRAGLVGADGATHAGAFDLAYLCCLPNMTVMAAADEAELVHMVA 464

Query: 545 TVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKD--VALLGYGAMVQNC 602
           T  + D  P+  RYPRG  V  +LP  RG  + IGKG+++ +  +  VA+L  G  +   
Sbjct: 465 TAHAHDSGPIALRYPRGEGVGVELP-ERGEALAIGKGRMVRQDAEARVAILSLGTRLSEA 523

Query: 603 LKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIA 662
           LKA   LS  G+ VTVADARF KPLD  L+ +L Q+H  LIT+EEGS GGFG+ V H ++
Sbjct: 524 LKAADTLSDQGVAVTVADARFAKPLDEALILDLAQSHEVLITIEEGSRGGFGAMVLHLLS 583

Query: 663 LDGLLDSG-VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATA 706
             G LD+G V+ R + LPD Y +H SP +  A AGL    I  TA
Sbjct: 584 ERGALDAGRVRVRTLTLPDLYQDHDSPEKMYAEAGLDAATIVKTA 628


>gi|14334452|gb|AAK59424.1| putative DEF (CLA1) protein [Arabidopsis thaliana]
          Length = 406

 Score =  519 bits (1337), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 257/410 (62%), Positives = 310/410 (75%), Gaps = 11/410 (2%)

Query: 316 MIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR----- 370
           MI   GS+LFEELGLYYIGPVDGHNI+DL+++L+EV S  + GPVL+HVVTE+ R     
Sbjct: 1   MISGTGSSLFEELGLYYIGPVDGHNIDDLVAILKEVKSTRTTGPVLIHVVTEKGRGYPYA 60

Query: 371 -RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGME 429
            RA+D  K   + K     +        N +++Y   F EALV EAE DKD+V +HA M 
Sbjct: 61  ERADD--KYHGVVKFDP--ATGRQFKTTNKTQSYTTYFAEALVAEAEVDKDVVAIHAAMG 116

Query: 430 MDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDV 489
               L LFQ +FP R FDVG+AEQHAVTF+AGLAC GLKPFC I S+F+QRAYDQVV+DV
Sbjct: 117 GGTGLNLFQRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDV 176

Query: 490 DQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASI 549
           D Q+LPVRF +  AGLVG+DGPT CGAFD+TFM+CLPNMIVMAPSDE +L +MVAT  +I
Sbjct: 177 DLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMACLPNMIVMAPSDEADLFNMVATAVAI 236

Query: 550 DDRPVCFRYPRGAIVRTDL-PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARAL 608
           DDRP CFRYPRG  +   L PG +G+PIEIGKG++L EG+ VALLGYG+ VQ+CL A  +
Sbjct: 237 DDRPSCFRYPRGNGIGVALPPGNKGVPIEIGKGRILKEGERVALLGYGSAVQSCLGAAVM 296

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLD 668
           L + G++VTVADARFCKPLD  L+R L ++H  LITVEEGSIGGFGSHV  F+ALDGLLD
Sbjct: 297 LEERGLNVTVADARFCKPLDRALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLD 356

Query: 669 SGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALL 718
             +KWRP+VLPD YI+H +P  QLA AGL   HIAATAL+L+G  REAL 
Sbjct: 357 GKLKWRPMVLPDRYIDHGAPADQLAEAGLMPSHIAATALNLIGAPREALF 406


>gi|397623997|gb|EJK67229.1| hypothetical protein THAOC_11764 [Thalassiosira oceanica]
          Length = 752

 Score =  517 bits (1332), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 286/679 (42%), Positives = 400/679 (58%), Gaps = 61/679 (8%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           PILD V  P  +K L ++EL+QLA E+R E+   VS+T     SSL  +ELT+ALH+VF 
Sbjct: 55  PILDSVTFPHDMKRLDMRELQQLAHELRWEVIESVSQTGGHFSSSLGVIELTIALHYVFD 114

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D I+WDV  Q Y HK+LTGRR    TLR+ DG+SG+  R ESEYD F AGH   S+S
Sbjct: 115 MPEDDIIWDVAHQCYPHKMLTGRRDRFPTLRQLDGMSGFCKRKESEYDSFGAGHSSTSIS 174

Query: 200 AGLGMAVARDI-KGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           A  GM+VA+ + + +R   + VI +G    G AYEAM++AGYL S MIV+LND+     P
Sbjct: 175 AAQGMSVAKSLLQKRRNNCIAVIGDGAITGGMAYEAMNSAGYLTSRMIVVLNDNGQVSLP 234

Query: 259 KIEES-----PKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYA 313
              +S     P + ++A +S L     SK F+  R+ AK + K     + +   ++DEYA
Sbjct: 235 TGTQSAGGVKPASQLSAYTSNL---LVSKPFQDFRDFAKSLNKLFPENVQDVNKRIDEYA 291

Query: 314 RGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAE 373
           RG++   G TLFEELG +Y+GP+DGH++E+++ +L+++    S  PVL+H+ T +    E
Sbjct: 292 RGVV--TGGTLFEELGFFYVGPIDGHDLENMVPILEKLRDSDSNKPVLLHLKTTKGYGYE 349

Query: 374 DTQKSEAIEKQQEGASDSNSLPFGNYSR--TYDDCFIEALVMEAEKDKDIVVVHAGMEMD 431
              K+               + F   +   ++   F  AL+  A + ++IV + A M   
Sbjct: 350 PALKASDRMHGVGKFDIKTGIQFKGKAAAPSFTSIFANALIDAATEHREIVGITAAMPGG 409

Query: 432 LSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQ 491
             + +F  +FP+R FDVG+AEQHAVTF+AG+AC GLKPFC I S F+QR YDQVV+DV  
Sbjct: 410 TGMDIFGRRFPKRTFDVGIAEQHAVTFAAGMACEGLKPFCCIYSTFMQRGYDQVVHDVAI 469

Query: 492 QRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDD 551
           Q LPVR ++  AG+VG+DGPT  G +D+ +M C+PN+ +M+PSDE EL +MVAT A  D+
Sbjct: 470 QNLPVRMILDRAGVVGNDGPTHHGCYDLAYMGCIPNLTIMSPSDEIELRNMVATAADFDE 529

Query: 552 RPVCFRYPRGAIVRTD----LPGY---------RGIPIEIGKGKVLVEG----------- 587
            P+  RYPRG     D    L GY         +G+ IEIGKG+++ E            
Sbjct: 530 GPIVLRYPRGVGYAADKLQTLFGYDLQDGEVPTKGVAIEIGKGRIIREPGGIRTLSKPEA 589

Query: 588 ---------------------KDVALLGYGAMVQNCLKARALL--SKLGIDVTVADARFC 624
                                  VA+L  G+ +   L A   L  S   + VTVADARF 
Sbjct: 590 VPANGSTDSTIGAGSRGETRESRVAILSIGSRLSEALIAADELEESYPNLAVTVADARFM 649

Query: 625 KPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSG-VKWRPIVLPDNYI 683
           KPLD  LV  L  ++  ++TVEEGS+GGFG HV HF++ +G LDSG +++RP+V+PD Y 
Sbjct: 650 KPLDKDLVLSLAADNGVIVTVEEGSVGGFGDHVLHFLSHEGALDSGDLRFRPMVMPDTYF 709

Query: 684 EHASPTQQLALAGLTGHHI 702
           E A+  +Q  +AGL   HI
Sbjct: 710 ETATQYEQYEMAGLNARHI 728


>gi|339320004|ref|YP_004679699.1| 1-deoxy-D-xylulose-5-phosphate synthase [Candidatus Midichloria
           mitochondrii IricVA]
 gi|338226129|gb|AEI89013.1| 1-deoxy-D-xylulose-5-phosphate synthase [Candidatus Midichloria
           mitochondrii IricVA]
          Length = 624

 Score =  516 bits (1329), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 275/647 (42%), Positives = 395/647 (61%), Gaps = 43/647 (6%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L  V  P  LK L I++LK L+ EIR  +  I S+    L +SL  VELTVALHH+F  
Sbjct: 3   LLGRVSLPFDLKGLKIEDLKVLSDEIREMIIKIASEKGGHLGASLGVVELTVALHHIFDT 62

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D ++WDVG Q Y HKILTGR+ L+ T+R+  GI+G+T R+ES YDPF AGH   S+SA
Sbjct: 63  PEDILIWDVGHQAYPHKILTGRKDLMSTIRQPGGIAGFTKRNESIYDPFGAGHSSTSISA 122

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKI 260
            LG A ARDIK +   ++ VI +G   AG A+EA++NA  L++ M+VILND++ S+ P  
Sbjct: 123 ALGFAAARDIKKQNNHVIAVIGDGAMSAGMAFEALNNASMLNTKMLVILNDNKMSIAP-- 180

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKG------MTKRIGRGMHEWAAKVDEYAR 314
                 ++ A+SS L+++ SS+ + + R +AK         +++ + + +   ++     
Sbjct: 181 ------AVGAMSSYLAKLLSSRQYYKARNIAKNALHYTPFFEKVVKNVQKCTKRL----- 229

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMG-PVLVHVVTEENRRAE 373
                 GS  FEE+G +YIGPV GH+++ LI VL+ +     +  P+L+H+ TE+ R  +
Sbjct: 230 ----ATGSNFFEEIGFHYIGPVGGHSLDQLIPVLRNIRDNDQVNKPILLHIRTEKGRGFD 285

Query: 374 DTQKSEAIEKQQEGASDSNSLPFGNYSR----------TYDDCFIEALVMEAEKDKDIVV 423
             +KS  +E      S    LPF   ++          +Y   F   L   A+K+K++V 
Sbjct: 286 SPEKS--LE------SYHAVLPFDLQTKIQKKPEKSYLSYSKVFASTLTKIAKKNKEVVA 337

Query: 424 VHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYD 483
           + A M     L L  ++ P++ +DVG+AEQHAVTF+AGLA  G KPF  I S FLQRAYD
Sbjct: 338 ITAAMPSGTGLDLMIKELPDQVYDVGIAEQHAVTFAAGLAAAGTKPFVAIYSTFLQRAYD 397

Query: 484 QVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMV 543
           Q+++DV  Q LPVRF++  AGLVG+DGPT  G+FD+ ++  LPN I MAPSDE EL  MV
Sbjct: 398 QIIHDVAIQSLPVRFMLDRAGLVGADGPTHAGSFDLAYLCNLPNFICMAPSDEAELAKMV 457

Query: 544 ATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCL 603
            T   I+  P   RYP+      +   Y   P+EIGKG+V+ +G+ +A+L  G  +Q C+
Sbjct: 458 FTAYQINHCPSAVRYPKAKTNSIEF-NYELEPLEIGKGRVIQKGERIAILSLGTRLQECI 516

Query: 604 KARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIAL 663
           K   +L K G D+T+ADARF KP+D +L+R+L  +H  L+TVEEG+IGGFGS V+ F+  
Sbjct: 517 KTSEMLKKDGFDITIADARFAKPIDTELIRDLASSHDILLTVEEGAIGGFGSSVAQFLLN 576

Query: 664 DGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
           DGLLD  +K+R + LPD +IE  +  Q    AGL    +  T  +LL
Sbjct: 577 DGLLDGKLKFRLLCLPDYFIEQNTVQQMYEEAGLNTRDMCQTIKNLL 623


>gi|339505914|ref|YP_004716612.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseobacter litoralis Och
           149]
 gi|338759907|gb|AEI96370.1| 1-deoxy-D-xylulose-5-phosphate synthase Dxs [Roseobacter litoralis
           Och 149]
          Length = 645

 Score =  515 bits (1327), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 292/641 (45%), Positives = 392/641 (61%), Gaps = 20/641 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP LD V  P  L+S++  EL+ +A E+R+E+   VS+T   L SSL  VEL+VA+H VF
Sbjct: 6   TPTLDRVAGPADLRSMSDLELRTVADELRAEVVEAVSQTGGHLGSSLGVVELSVAIHAVF 65

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P DK++WDVG Q Y HKILTGRR  + TLR+  GISG+T RSESEYDPF A H   S+
Sbjct: 66  DTPRDKLVWDVGHQCYPHKILTGRRKQMPTLRQGGGISGFTKRSESEYDPFGAAHSSTSI 125

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LG  V+RD+       V VI +G+  AG AYEA++NAG+    M VILND+  S+ P
Sbjct: 126 SAALGFTVSRDMGQPTGDAVAVIGDGSISAGMAYEALNNAGHEGRRMFVILNDNEMSIAP 185

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                P  ++++  S+LS +     F  L  +A+GM +   + + + A +  E   G+  
Sbjct: 186 -----PVGAMSSYLSSLSELSRVGPFGGLVAIAEGMEQLAPKPVRDGARRARELVTGL-- 238

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
               T FEELG  YIGP+DGH++E L+SVL+  A   + GPVL+H  T + +       +
Sbjct: 239 ESRGTFFEELGFDYIGPIDGHDMEQLLSVLRG-AKARATGPVLIHCCTVKGK---GYAPA 294

Query: 379 EAIEKQQEGASDSNSLPFGNYSR------TYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
           E    +  G S  N +  G  ++      +Y   F +AL   AE+D  +V V A M    
Sbjct: 295 EGSADKYHGVSKFN-VGTGVQAKAKANAPSYTAVFGDALTSLAEEDPSVVAVTAAMPSGT 353

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            +    ++FP R FDVG+AEQH VTF+A +A  GLKPFC I S FLQR YDQ+V+DV  Q
Sbjct: 354 GVDRMAKRFPNRVFDVGIAEQHGVTFAAAMAATGLKPFCAIYSTFLQRGYDQIVHDVALQ 413

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
            LPVRF I  AGLVG+DG T  G+FDI ++  LP M+VMA +DE ELV MVAT  + +D 
Sbjct: 414 GLPVRFAIDRAGLVGADGATHAGSFDIGYLGALPGMVVMAAADEAELVHMVATAGAHNDG 473

Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGK-DVALLGYGAMVQNCLKARALLSK 611
           P+ FRYPRG      LP   G  +EIGKG+++ EG  +VA+L  G ++ +C  A  +L  
Sbjct: 474 PIAFRYPRGNGTGVPLP-EMGRVLEIGKGRMIREGDGEVAILSLGTLLSDCEAAARMLEA 532

Query: 612 LGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGV 671
            GI+ T+ADARF KPLD++L+  L QNH  LITVE+G++GGFG+ V   +A +GLLD G 
Sbjct: 533 EGINATIADARFAKPLDMELIANLVQNHKALITVEQGAMGGFGAMVLQSMAAEGLLDLGC 592

Query: 672 KWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
           K R I LPD +I+ ASPT+    AGL    I      +LGR
Sbjct: 593 KLRTICLPDRFIDQASPTEMYREAGLDTLGIVEQVTRVLGR 633


>gi|223943853|gb|ACN26010.1| unknown [Zea mays]
 gi|413945324|gb|AFW77973.1| hypothetical protein ZEAMMB73_720473 [Zea mays]
          Length = 413

 Score =  509 bits (1312), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 253/415 (60%), Positives = 304/415 (73%), Gaps = 17/415 (4%)

Query: 316 MIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR----- 370
           MI   GS+LFEELGLYYIGPVDGHNI+DLI++L +V S  + GPVL+HVVTE+ R     
Sbjct: 1   MISGPGSSLFEELGLYYIGPVDGHNIDDLITILNDVKSTKTTGPVLIHVVTEKGRGYPYA 60

Query: 371 -RAEDTQKSEAIEKQQEGA---SDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHA 426
            RA D     A      G    S + +L + NY       F EAL+ EAE+D  IV +HA
Sbjct: 61  ERAADKYHGVAKFDPATGKQFKSPAKTLSYTNY-------FAEALIAEAEQDSKIVAIHA 113

Query: 427 GMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVV 486
            M     L  F  +FP R FDVG+AEQHAVTF+AGLAC GLKPFC I S+FLQR YDQVV
Sbjct: 114 AMGGGTGLNYFLRRFPSRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFLQRGYDQVV 173

Query: 487 NDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATV 546
           +DVD Q+LPVRF +  AGLVG+DGPT CGAFD+ +M+CLPNM+VMAPSDE EL  MVAT 
Sbjct: 174 HDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVAYMACLPNMVVMAPSDEAELCHMVATA 233

Query: 547 ASIDDRPVCFRYPRGAIVRTDL-PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKA 605
           A+IDDRP CFRYPRG  V   L P Y+G P+E+GKG++L+EG  VALLGYG+ VQ CL A
Sbjct: 234 AAIDDRPSCFRYPRGNGVGVPLPPNYKGTPLEVGKGRILLEGDRVALLGYGSAVQYCLTA 293

Query: 606 RALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDG 665
            +L+ + G+ VTVADARFCKPLD  L+R L ++H  LITVEEGSIGGFGSHV+ F+ALDG
Sbjct: 294 ASLVQRHGLKVTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVAQFMALDG 353

Query: 666 LLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLLM 720
           LLD  +KWRP+VLPD YI+H SP  QLA AGLT  HIAA+  ++LG+ REAL +M
Sbjct: 354 LLDGKLKWRPLVLPDRYIDHGSPADQLAEAGLTPSHIAASVFNILGQNREALAIM 408


>gi|170656911|gb|ACB25966.1| deoxyxylulose-5-phosphate synthase [Methylobacterium radiotolerans
           JCM 2831]
          Length = 634

 Score =  509 bits (1312), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 295/632 (46%), Positives = 390/632 (61%), Gaps = 42/632 (6%)

Query: 102 LAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTG 161
           +A  +R+E+   VS T   L S L  VELTVALHHVF  P D+I+WDVG Q Y HKILT 
Sbjct: 1   MADAVRAEMIDAVSITGGHLGSGLGVVELTVALHHVFDTPDDRIVWDVGHQCYPHKILTE 60

Query: 162 RRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDI-------KG-- 212
           RR  I TLR+  G+SG+T RSES YDPF A H   S+SA LGMAVARD+       KG  
Sbjct: 61  RRDRIRTLRQGGGLSGFTKRSESVYDPFGAAHSSTSISAALGMAVARDLDNATAKQKGGA 120

Query: 213 -KRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKIEESPKTSINAL 271
            KR   + VI +G+  AG AYEA++NAG L S +IVILND+  S+ P         + A+
Sbjct: 121 QKRRNAIAVIGDGSMSAGMAYEALNNAGALHSRLIVILNDNDMSIAP--------PVGAM 172

Query: 272 SSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEELGLY 331
           S+ L+R+ S  +++ LRE AK + K + + +++ AA  +EYAR ++   G T+FEE+G +
Sbjct: 173 SAYLARLASGGAYQSLRETAKQLGKLLPKALYQRAAAAEEYARSLV-VGGGTMFEEMGFH 231

Query: 332 YIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR----------RAEDTQKSEAI 381
           Y+GPVDGHN++ L+ VL+ V      GP+L+HVVT++ +          R     K + +
Sbjct: 232 YVGPVDGHNLDHLLPVLKNVRD-AEHGPILLHVVTQKGKGYAPAEASADRYHGVVKFDVV 290

Query: 382 EKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKF 441
              Q  A  +        +  Y   F E+L+  A+ D  +V + A M     + LF +  
Sbjct: 291 SGIQAKAKPN--------APAYTRVFGESLIKAADADDKVVAITAAMPGGTGIDLFGKAH 342

Query: 442 PERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVIT 501
           P++ FDVG+AEQHAVTF+ GLA  G +PF  I S FLQRAYDQVV+DV  Q LPVRF + 
Sbjct: 343 PDKTFDVGIAEQHAVTFAGGLATEGYRPFVAIYSTFLQRAYDQVVHDVALQNLPVRFCLD 402

Query: 502 SAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYPRG 561
            AGLVG+DG T  GAFD+ ++ CLPNM VMA +DE ELV MVAT  + D  P+  RYPRG
Sbjct: 403 RAGLVGADGATHAGAFDLAYLCCLPNMTVMAAADEAELVHMVATAHAHDTGPIALRYPRG 462

Query: 562 AIVRTDLPGYRGIPIEIGKGKVLVEGKD--VALLGYGAMVQNCLKARALLSKLGIDVTVA 619
             V  +LP  RG  + IGKG+V+    +  VALL  G  +   LKA   L++ G+ VTVA
Sbjct: 463 EGVGVELP-ERGEVLAIGKGRVVRRDAEARVALLSLGTRLAEALKAADALAEQGVAVTVA 521

Query: 620 DARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDS-GVKWRPIVL 678
           DARF KPLD  L+ +L ++H  LITVEEGS GGFG+ V H +A  G LD+ GV+ R + L
Sbjct: 522 DARFAKPLDEALILDLARDHEVLITVEEGSRGGFGAMVLHLLAERGALDAGGVRVRTMTL 581

Query: 679 PDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
           PD Y +H SP +  A AGL    I  TAL+ L
Sbjct: 582 PDAYQDHDSPEKMYAEAGLDAKTIVRTALATL 613


>gi|170656381|gb|ACB25436.1| deoxyxylulose-5-phosphate synthase [Methylobacterium radiotolerans
           JCM 2831]
          Length = 626

 Score =  508 bits (1308), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 295/632 (46%), Positives = 389/632 (61%), Gaps = 42/632 (6%)

Query: 102 LAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTG 161
           +A  +R+E+   VS T   L S L  VELTVALHHVF  P D+I+WDVG Q Y HKILT 
Sbjct: 1   MADAVRAEMIDAVSITGGHLGSGLGVVELTVALHHVFDTPDDRIVWDVGHQCYPHKILTE 60

Query: 162 RRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDI-------KG-- 212
           RR  I TLR+  G+SG+T RSES YDPF A H   S+SA LGMAVARD+       KG  
Sbjct: 61  RRDRIRTLRQGGGLSGFTKRSESVYDPFGAAHSSTSISAALGMAVARDLDNATAKQKGGA 120

Query: 213 -KRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKIEESPKTSINAL 271
            KR   + VI +G+  AG AYEA++NAG L S +IVILND+  S+ P         + A+
Sbjct: 121 QKRRNAIAVIGDGSMSAGMAYEALNNAGALHSRLIVILNDNDMSIAP--------PVGAM 172

Query: 272 SSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEELGLY 331
           S+ L+R+ S  +++ LRE AK + K + + +++ AA  +EYAR ++   G T+FEE+G +
Sbjct: 173 SAYLARLASGGAYQSLRETAKQLGKLLPKALYQRAAAAEEYARSLV-VGGGTMFEEMGFH 231

Query: 332 YIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR----------RAEDTQKSEAI 381
           Y+GPVDGHN++ L+ VL+ V      GP+L+HVVT++ +          R     K + +
Sbjct: 232 YVGPVDGHNLDHLLPVLKNVRD-AEHGPILLHVVTQKGKGYAPAEASADRYHGVVKFDVV 290

Query: 382 EKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKF 441
              Q  A  +        +  Y   F E+L+  A+ D  +V + A M     + LF +  
Sbjct: 291 SGIQAKAKPN--------APAYTRVFGESLIKAADADDKVVAITAAMPGGTGIDLFGKAH 342

Query: 442 PERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVIT 501
           P++ FDVG+AEQHAVTF+ GLA  G +PF  I S FLQRAYDQVV+DV  Q LPVRF + 
Sbjct: 343 PDKTFDVGIAEQHAVTFAGGLATEGYRPFVAIYSTFLQRAYDQVVHDVALQNLPVRFCLD 402

Query: 502 SAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYPRG 561
            AGLVG+DG T  GAFD+ ++ CLPNM VMA +DE ELV MVAT  + D  P+  RYPRG
Sbjct: 403 RAGLVGADGATHAGAFDLAYLCCLPNMTVMAAADEAELVHMVATAHAHDTGPIALRYPRG 462

Query: 562 AIVRTDLPGYRGIPIEIGKGKVLVEGKD--VALLGYGAMVQNCLKARALLSKLGIDVTVA 619
             V  +LP  RG  + IGKG+V+    +  VALL  G  +   LKA   L++ G+ VTVA
Sbjct: 463 EGVGVELP-ERGEVLAIGKGRVVRRDAEARVALLSLGTRLAEALKAADALAEQGVAVTVA 521

Query: 620 DARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDS-GVKWRPIVL 678
           DARF KPLD  L+ +L ++H  LITVEEGS GGFG+ V H +A  G LD+ GV+ R + L
Sbjct: 522 DARFAKPLDEALILDLARDHEVLITVEEGSRGGFGAMVLHLLAERGALDAGGVRVRTMTL 581

Query: 679 PDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
           PD Y +H SP +  A AGL    I  TAL  L
Sbjct: 582 PDAYQDHDSPEKMYAEAGLDAKTIVRTALDTL 613


>gi|110677515|ref|YP_680522.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseobacter denitrificans
           OCh 114]
 gi|118595484|sp|Q16DV7.1|DXS1_ROSDO RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase 1; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase 1; Short=DXP
           synthase 1; Short=DXPS 1
 gi|109453631|gb|ABG29836.1| 1-deoxy-D-xylulose-5-phosphate synthase, putative [Roseobacter
           denitrificans OCh 114]
          Length = 645

 Score =  507 bits (1305), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 289/650 (44%), Positives = 391/650 (60%), Gaps = 24/650 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP LD V  P  L+S++  EL+ +A E+R+E+   VS+T   L SSL  VEL+VA+H VF
Sbjct: 6   TPTLDRVAGPADLRSMSDTELRNVADELRAEVVEAVSQTGGHLGSSLGVVELSVAIHAVF 65

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P DK++WDVG Q Y HKILTGRR  + TLR+  GISG+T RSESEYDPF A H   S+
Sbjct: 66  DTPRDKLVWDVGHQCYPHKILTGRRKQMPTLRQGGGISGFTKRSESEYDPFGAAHSSTSI 125

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LG  ++RD+       V VI +G+  AG AYEAM+NAG+    M VILND+  S+ P
Sbjct: 126 SAALGFTISRDMGQPTGDAVAVIGDGSISAGMAYEAMNNAGHEGRRMFVILNDNEMSIAP 185

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                P  ++++  S+LS +  +  F  L  +A+GM +   + + + A +  E   G+  
Sbjct: 186 -----PVGAMSSYLSSLSELSRAGPFGGLVAIAEGMEQLAPKPVRDGARRARELVTGL-- 238

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRR---AEDT 375
               T FEELG  YIGP+DGH++  L+SVL+  A   + GPVL+H  T + +    AE +
Sbjct: 239 ENRGTFFEELGFDYIGPIDGHDMAQLLSVLRG-AKARATGPVLIHCCTVKGKGYAPAEGS 297

Query: 376 -QKSEAIEKQQEG----ASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
             K   + K   G    A    + P      +Y   F +AL   AE+D  +V V A M  
Sbjct: 298 ADKYHGVSKFDVGTGVQAKAKANAP------SYTAVFGDALTTLAEEDPSVVAVTAAMPS 351

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              +    ++FP R FDVG+AEQH VTF+A +A  GLKPFC I S FLQR YDQ+V+DV 
Sbjct: 352 GTGVDRMAKRFPNRVFDVGIAEQHGVTFAAAMAATGLKPFCAIYSTFLQRGYDQIVHDVA 411

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q LPVRF I  AGLVG+DG T  G+FDI ++  LP M+VMA +DE ELV MVAT  + +
Sbjct: 412 LQGLPVRFAIDRAGLVGADGATHAGSFDIGYLGALPGMVVMAAADEAELVHMVATAGAHN 471

Query: 551 DRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGK-DVALLGYGAMVQNCLKARALL 609
           D P+ FRYPRG      LP   G  +EIGKG+++ EG  +VA+L  G ++ +C  A  +L
Sbjct: 472 DGPIAFRYPRGNGTGVPLP-ETGRVLEIGKGRMIREGDGEVAILSLGTLLSDCEAAARIL 530

Query: 610 SKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDS 669
              GI+ T+ADARF KPLD+ L+  L Q H  LITVE+G++ GFG+ V   +A +GLLD 
Sbjct: 531 EAEGINATIADARFAKPLDMALIANLVQTHKALITVEQGAMAGFGAMVLQSMAAEGLLDL 590

Query: 670 GVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLL 719
           G K R + LPD +I+ A+P +    AGL    I      +LGR  + + L
Sbjct: 591 GCKVRTMCLPDRFIDQAAPAEMYRDAGLDTMGIVEQVTRVLGRDLKVVTL 640


>gi|163760422|ref|ZP_02167504.1| deoxyxylulose-5-phosphate synthase [Hoeflea phototrophica DFL-43]
 gi|162282373|gb|EDQ32662.1| deoxyxylulose-5-phosphate synthase [Hoeflea phototrophica DFL-43]
          Length = 675

 Score =  506 bits (1304), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 285/638 (44%), Positives = 386/638 (60%), Gaps = 22/638 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TPILD +++P  L+ ++  +L +LA E+R +  + V+ T   L S+L  VELTVA+H VF
Sbjct: 36  TPILDRIKSPEALRQMSDADLVRLADELRRDTIAKVAATGGHLGSTLGVVELTVAIHAVF 95

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P DK++WDVG Q YAHKILTGRR  + TLR+  G+SG+T R+ESEYDPF A H   S+
Sbjct: 96  DTPRDKLIWDVGHQAYAHKILTGRREAMATLRQDGGLSGFTKRAESEYDPFGAAHSSTSI 155

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLG A AR         + VI +G   AG AYEAM+NAG +   + VILND+  S+ P
Sbjct: 156 SAGLGFATARSFGFGDGDAIAVIGDGAMSAGMAYEAMNNAGTMGKRLFVILNDNEMSISP 215

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                   S+ A S  LS + +      +  + +     +       AA+  +    + G
Sbjct: 216 --------SVGAFSKHLSALCTQAPAIGMDVMMRKAASMLPEPFKTGAARARQAVGALAG 267

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
              S+LFE +G  YIGPVDGH++  L+++L+ V ++   GPVL+H +T +       + S
Sbjct: 268 T--SSLFEHMGFSYIGPVDGHDLPQLLAILRTVRNVAD-GPVLIHAITRKGAGYAPAENS 324

Query: 379 EAIEKQQEGASDSNSLPFGNYSRT------YDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
            A +    G+ D+ +   G  S++      Y   F +AL  EA++D  +V + A M    
Sbjct: 325 -ADKYHGVGSFDAET---GALSKSKPSAPAYTKVFAKALCDEADRDPGVVAITAAMASGT 380

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            L +F +  PER FDVG+AEQHAVTF+AGLA  G+KPFC I S FLQRAYDQ+V+DV  Q
Sbjct: 381 GLDVFSQAHPERMFDVGIAEQHAVTFAAGLAAAGMKPFCAIYSTFLQRAYDQIVHDVAIQ 440

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
            LPVRF I  AGLVG+DGPT  GAFD+ ++S LP   VMA +DE ELV MVAT  + D  
Sbjct: 441 GLPVRFAIDRAGLVGADGPTHAGAFDVAYLSNLPGFTVMAAADEAELVHMVATATAHDSG 500

Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
           P+ FRYPRG      LP  RG PI IGKG+V+ EG+D+A L +G  +  C KA  +L+  
Sbjct: 501 PIAFRYPRGEGTGVALP-ERGTPIPIGKGRVIREGRDIAFLSFGTRLGECEKAADILAAR 559

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 672
           G+  TVADARF KPLDI+L+  L  +H  LITVEEG+ GGFG+ V   +A  G LD    
Sbjct: 560 GLSATVADARFAKPLDIELIERLASSHDALITVEEGAGGGFGARVLEHLAAAGRLDGSFA 619

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
            R + LPD++  HASP+     +GL   H+A  A++ L
Sbjct: 620 IRTLTLPDHFEAHASPSVMYERSGLAAPHLADAAIASL 657


>gi|260574952|ref|ZP_05842954.1| deoxyxylulose-5-phosphate synthase [Rhodobacter sp. SW2]
 gi|259022957|gb|EEW26251.1| deoxyxylulose-5-phosphate synthase [Rhodobacter sp. SW2]
          Length = 632

 Score =  506 bits (1303), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 287/633 (45%), Positives = 379/633 (59%), Gaps = 28/633 (4%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TPILD +  P  L +L+  +L  LA E+R+E+ S+VS+T   L SSL  VEL VA+H VF
Sbjct: 6   TPILDRIAGPADLHALSDAQLALLAKEVRAEVISVVSETGGHLGSSLGVVELAVAIHAVF 65

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P DK++WDVG Q Y HKILTGRR  + +LR+  GISG+T RSESEYDPF A H   S+
Sbjct: 66  DTPRDKLIWDVGHQCYPHKILTGRRDRMRSLRQGGGISGFTKRSESEYDPFGAAHSSTSI 125

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LG AVARD+       + VI +G+  AG AYEAM+NAG +   + VILND+  S+ P
Sbjct: 126 SAALGFAVARDLGMPTGEAIAVIGDGSITAGMAYEAMNNAGDMHKRLFVILNDNDMSIAP 185

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                    + A+S  L+++ +   F  LR  A+G+   +   + + A +  +   G+  
Sbjct: 186 P--------VGAMSRYLNQLNNGAPFAALRAAAEGIEASLPGPLRDGARRARQLITGI-- 235

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR------RA 372
           P G TLFEELG  YIGP+DGH++  +++ L+  A   + GPV++H +T + +       A
Sbjct: 236 PGGGTLFEELGFTYIGPIDGHDMAQVLATLR-TARARATGPVMIHALTVKGKGYPPAEHA 294

Query: 373 EDTQKSEA---IEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGME 429
            D         +E   +  S SN       + +Y   F  AL   A  D  IV V A M 
Sbjct: 295 LDKYHGVGRFDVESGTQAKSKSN-------APSYTGVFGTALANAAALDTRIVAVTAAMP 347

Query: 430 MDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDV 489
               + +   KFP R FDVG+AEQH VTF+A +A  GL+PF  I S FLQR YDQ+V+DV
Sbjct: 348 SGTGVDIMAAKFPARVFDVGIAEQHGVTFAAAMAAAGLRPFVAIYSTFLQRGYDQIVHDV 407

Query: 490 DQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASI 549
             Q LPVRF I  AGLVG DG T  GAFD+ F++ LP M+VMA  DE +LV MVAT A+ 
Sbjct: 408 ALQGLPVRFAIDRAGLVGQDGATHAGAFDVGFLADLPGMVVMAAGDEADLVHMVATAAAY 467

Query: 550 DDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALL 609
           DD P+ FRYPRG     ++P   G  + IGKG+VL +G D+ALL +GA +  CL A  LL
Sbjct: 468 DDGPIAFRYPRGEGRGVEVPS-PGEILPIGKGRVLRQGDDLALLSFGAHLGECLIAADLL 526

Query: 610 SKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDS 669
              GI VTVADARF KPLD  L+ +L ++H  +ITVE+GS GGF + V H++A  G  D 
Sbjct: 527 EADGISVTVADARFAKPLDTDLITQLVRHHKAVITVEQGSAGGFAAQVLHYLANSGGFDR 586

Query: 670 GVKWRPIVLPDNYIEHASPTQQLALAGLTGHHI 702
           G   R + LPD +IE ASP      AG+T   I
Sbjct: 587 GAVVRTLTLPDRFIEQASPAAMYLDAGMTAQDI 619


>gi|356550766|ref|XP_003543755.1| PREDICTED: LOW QUALITY PROTEIN: probable
           1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic-like, partial [Glycine max]
          Length = 478

 Score =  496 bits (1278), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 254/481 (52%), Positives = 327/481 (67%), Gaps = 16/481 (3%)

Query: 244 NMIVILNDSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGM 302
           ++I+ILND+   SL     + P   + ALS  L+ + ++  F  LREVAKG+TK+IG   
Sbjct: 6   DLILILNDNEQVSLPTATIDGPAPPVGALSRALAXLNTNSKFHXLREVAKGITKQIGSRA 65

Query: 303 HEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLV 362
           HE+A+K+D Y RGM G  G+ LFEELGL+YIGPVD H+I            + ++GP+L+
Sbjct: 66  HEFASKLDSYIRGMAGGAGACLFEELGLFYIGPVDSHDIXK---------GMPTLGPILI 116

Query: 363 HVVTEENRRAEDTQKSEAIEKQQEGASDSNSLPFGNY-SRTYDDCFIEALVMEAEKDKDI 421
           HV+TE+ +R      +E    +  GA   +        S+     F E+L  EAE D+ I
Sbjct: 117 HVITEKGKR---YHPAEVAPDKMHGAVKFDPKSRKQLKSKASTQYFAESLTAEAEVDEKI 173

Query: 422 VVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRA 481
           V +HA M     L LFQ++FPER FDVG+AEQHAVTF+AGLA  GL  F  I S+FLQR 
Sbjct: 174 VAIHAAMGGGTGLNLFQKRFPERCFDVGIAEQHAVTFAAGLAAEGLNLFRAIYSSFLQRN 233

Query: 482 YDQV-VNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELV 540
           YDQV  +DVD Q+LPVRF + +AGLVG+DGPT CGAFD TFM+CLPNM+VMAPSDE EL+
Sbjct: 234 YDQVRTHDVDLQKLPVRFALDAAGLVGADGPTHCGAFDTTFMACLPNMVVMAPSDETELM 293

Query: 541 DMVATVASIDDRPVCFRYPRGAIVRTDLP-GYRGIPIEIGKGKVLVEGKDVALLGYGAMV 599
            M+AT A+IDDRP CFRYPRG  + T LP   +G P++IGKG++L EG  VAL+GYG M+
Sbjct: 294 HMIATAAAIDDRPSCFRYPRGNGIGTILPPNNKGTPMQIGKGRILKEGSRVALVGYGTMI 353

Query: 600 QNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSH 659
           Q+C++   +L   GI  TVADARFCKPLD  L+  L + H  LITVEEGSIGGFGSHVSH
Sbjct: 354 QSCMEVAKVLEAHGISTTVADARFCKPLDGDLMTRLAREHEILITVEEGSIGGFGSHVSH 413

Query: 660 FIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLL 719
           F+ L+GLLD  +KW  + LPD YI H S T Q+ +AGL+ +HIA TALSL     ++ LL
Sbjct: 414 FLGLNGLLDGNLKWLALTLPDRYINHGSQTDQIEMAGLSSNHIAVTALSLTNVHWDSRLL 473

Query: 720 M 720
           +
Sbjct: 474 L 474


>gi|349700050|ref|ZP_08901679.1| 1-deoxy-D-xylulose-5-phosphate synthase, partial [Gluconacetobacter
           europaeus LMG 18494]
          Length = 575

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 268/570 (47%), Positives = 359/570 (62%), Gaps = 34/570 (5%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P LD V  P  +++L++++LKQLA E+RSE    VS T   L +SL  VELTVALH VF 
Sbjct: 17  PQLDRVRAPHDMRNLSVEQLKQLAEELRSETIDAVSTTGGHLGASLGVVELTVALHAVFD 76

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG Q Y HKILTGRR  I TLR+  G+SG+T RSESEYDPF A H   S+S
Sbjct: 77  TPDDRVIWDVGHQAYPHKILTGRRERIRTLRQPGGLSGFTRRSESEYDPFGAAHSSTSIS 136

Query: 200 AGLGMAVARDIKG------KRECIVTVISNGTTMAGQAYEAMSNAGYLD---SNMIVILN 250
           AGLGMAVA  ++       +   ++ VI +G+  AG AYEAM+NA +       +IV+LN
Sbjct: 137 AGLGMAVAHHLRAEEDPSYRERNVIAVIGDGSISAGMAYEAMNNASHCGPGAERLIVVLN 196

Query: 251 DSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVD 310
           D+  S+ P +         A+S+ LSR+ SS+ F  LRE+A  M KR+   +   A K D
Sbjct: 197 DNEMSIAPPV--------GAMSNYLSRLMSSRKFLSLRELAAKMAKRLPGRLERTAKKAD 248

Query: 311 EYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR 370
           EYARG++   G TLFEELG YYIGPVDGH++  L+ +L+ +     +GPVLVHV+TE+  
Sbjct: 249 EYARGIM--TGGTLFEELGFYYIGPVDGHDMNQLVHILRNLRDAEDVGPVLVHVITEKGH 306

Query: 371 RAEDTQ----KSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHA 426
                +    K  A+ K      +    P G  S  Y   F + LV +A  D  IV + A
Sbjct: 307 GYTPAESAGDKYHAVSKFNVVTGEQKKGPSGPPS--YTSVFAKELVRQAATDDRIVTITA 364

Query: 427 GMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVV 486
            M     L  F + +P+R+FDVG+AEQHAVTF+AG+A  GL+PFC I S FLQRAYDQV+
Sbjct: 365 AMPSGTGLDKFAKAYPDRFFDVGIAEQHAVTFAAGMATEGLRPFCAIYSTFLQRAYDQVM 424

Query: 487 NDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATV 546
           +DV  Q+LPVRF I  AGLVG+DG T  GAFDI ++ CLP M +MAPS+E EL+ M AT 
Sbjct: 425 HDVVLQKLPVRFAIDRAGLVGADGATHAGAFDIAYLGCLPGMTLMAPSNELELLHMTATS 484

Query: 547 ASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVE-----GKD---VALLGYGAM 598
            + D+ P+  RYPRGA +  +LP    I +EIG+G+++ E     G +   +A+L  G  
Sbjct: 485 IAFDEGPIGLRYPRGAGLGLELPAAGQI-LEIGRGRIVREMTRQSGPEQGGIAILSLGPR 543

Query: 599 VQNCLKARALLSKLGIDVTVADARFCKPLD 628
           +++ LKA  +L+  G+  TVADARF KP+D
Sbjct: 544 LEDALKAADMLAAQGLSPTVADARFAKPID 573


>gi|349700982|ref|ZP_08902611.1| 1-deoxy-D-xylulose-5-phosphate synthase, partial [Gluconacetobacter
           europaeus LMG 18494]
          Length = 578

 Score =  494 bits (1272), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 268/570 (47%), Positives = 359/570 (62%), Gaps = 34/570 (5%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P LD V  P  +++L++++LKQLA E+RSE    VS T   L +SL  VELTVALH VF 
Sbjct: 20  PQLDRVRMPHDMRNLSVEQLKQLAEELRSETIDAVSTTGGHLGASLGVVELTVALHAVFD 79

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG Q Y HKILTGRR  I TLR+  G+SG+T RSESEYDPF A H   S+S
Sbjct: 80  TPDDRVIWDVGHQAYPHKILTGRRERIRTLRQPGGLSGFTRRSESEYDPFGAAHSSTSIS 139

Query: 200 AGLGMAVARDIKG------KRECIVTVISNGTTMAGQAYEAMSNAGYLD---SNMIVILN 250
           AGLGMAVA  ++       +   ++ VI +G+  AG AYEAM+NA +       +IV+LN
Sbjct: 140 AGLGMAVAHHLRAEEDPSYRERNVIAVIGDGSISAGMAYEAMNNASHCGPGAERLIVVLN 199

Query: 251 DSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVD 310
           D+  S+ P +         A+S+ LSR+ SS+ F  LRE+A  M KR+   +   A K D
Sbjct: 200 DNEMSIAPPV--------GAMSNYLSRLMSSRKFLSLRELAAKMAKRLPGRLERTAKKAD 251

Query: 311 EYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR 370
           EYARG++   G TLFEELG YYIGPVDGH++  L+ +L+ +     +GPVLVHV+TE+  
Sbjct: 252 EYARGIM--TGGTLFEELGFYYIGPVDGHDMNQLVHILRNLRDAEDVGPVLVHVITEKGH 309

Query: 371 RAEDTQ----KSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHA 426
                +    K  A+ K      +    P G  S  Y   F + LV +A  D  IV + A
Sbjct: 310 GYTPAESAGDKYHAVSKFNVVTGEQKKGPSGPPS--YTSVFAKELVRQAATDDRIVTITA 367

Query: 427 GMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVV 486
            M     L  F + +P+R+FDVG+AEQHAVTF+AG+A  GL+PFC I S FLQRAYDQV+
Sbjct: 368 AMPSGTGLDKFAKAYPDRFFDVGIAEQHAVTFAAGMATEGLRPFCAIYSTFLQRAYDQVM 427

Query: 487 NDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATV 546
           +DV  Q+LPVRF I  AGLVG+DG T  GAFDI ++ CLP M +MAPS+E EL+ M AT 
Sbjct: 428 HDVVLQKLPVRFAIDRAGLVGADGATHAGAFDIAYLGCLPGMTLMAPSNELELLHMTATS 487

Query: 547 ASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVE-----GKD---VALLGYGAM 598
            + D+ P+  RYPRGA +  +LP    I +EIG+G+++ E     G +   +A+L  G  
Sbjct: 488 IAFDEGPIGLRYPRGAGLGLELPAAGQI-LEIGRGRIVREMTRQSGPEQGGIAILSLGPR 546

Query: 599 VQNCLKARALLSKLGIDVTVADARFCKPLD 628
           +++ LKA  +L+  G+  TVADARF KP+D
Sbjct: 547 LEDALKAADMLAAQGLSPTVADARFAKPID 576


>gi|406707992|ref|YP_006758344.1| 1-deoxy-D-xylulose-5-phosphate synthase [alpha proteobacterium
           HIMB59]
 gi|406653768|gb|AFS49167.1| 1-deoxy-D-xylulose-5-phosphate synthase [alpha proteobacterium
           HIMB59]
          Length = 621

 Score =  487 bits (1253), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 262/632 (41%), Positives = 378/632 (59%), Gaps = 16/632 (2%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
            L  +  P  LK LT+ ELK L  E+R+     VSKT   L +SL  VELTVALH+VF  
Sbjct: 3   FLSKINFPKDLKKLTLDELKILNDELRTFTIETVSKTGGHLGASLGVVELTVALHYVFDT 62

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P DKI+WDVG QTY HKI+TGR+  IHTLRKK+G+SG+T RSES YDPF A H   S+SA
Sbjct: 63  PKDKIVWDVGHQTYPHKIITGRKRKIHTLRKKNGLSGFTKRSESIYDPFGAAHSSTSISA 122

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKI 260
            LG+AVARD++ K   ++++I +G   AG A+E ++N G+L  N ++ILND+        
Sbjct: 123 NLGIAVARDLQKKSFDVISIIGDGAISAGMAFEGLNNIGHLSKNSLIILNDN-------- 174

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQ 320
           E S    + A+S  L  + SSK++  +R+V K  TK++   +  +A K + Y +G +   
Sbjct: 175 EMSIAKPVGAMSKYLVNLLSSKTYENIRDVVKNFTKKLPDEVGNFAKKTEGYLKGYL--T 232

Query: 321 GSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSEA 380
           G+TLFEELG+ YIGP+DGHN++ LI + Q+       GPV +H++TE+ +     + S  
Sbjct: 233 GNTLFEELGMNYIGPIDGHNLDLLIQLFQKYKEKELHGPVFLHIITEKGKGYAPAENSND 292

Query: 381 IEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEK 440
                        +   +  +TY     E L+  A+KDK +  + A M     L  FQE 
Sbjct: 293 KFHGVSSFDIQTGVQNKSKDKTYTSVISETLLKLAKKDKKVTAITAAMPSGTGLDKFQEL 352

Query: 441 FPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVI 500
           +P+R+FDVG+AEQHAVTF+ G+A   +KPF  I S FLQRAYDQVV+D+  Q LPVRF+I
Sbjct: 353 YPDRFFDVGIAEQHAVTFAGGMATESMKPFVAIYSTFLQRAYDQVVHDIAIQSLPVRFLI 412

Query: 501 TSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYPR 560
             +G VG+DG T  G+FD+T++ CLPN IVMAPS  +EL +M+    SI+++P   RYPR
Sbjct: 413 DRSGFVGADGATHAGSFDLTYLCCLPNFIVMAPSSGEELKNMLNFSLSINNKPSAIRYPR 472

Query: 561 GAIVR-TDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNC-LKARALLSKLGIDVTV 618
             +    +   +    I +GKGKV+ +GK +A L  G  ++   L ++ +  K     T+
Sbjct: 473 DTVGEYNEKKSFE--KITLGKGKVIQKGKKIAFLNLGTRLEQVKLASKLIKDKNKFQTTI 530

Query: 619 ADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWRPIVL 678
            D RF KP+D +L++ L +NH   ITVEE +IGGF S V++F      +   +K     +
Sbjct: 531 IDMRFAKPIDTQLLKTLLKNHDIFITVEENAIGGFSSQVNNFFL--NQIKKQIKVLNFFM 588

Query: 679 PDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
            D +I+ +    Q + +G++   I     +LL
Sbjct: 589 KDEFIDQSDINDQYSQSGISPEEIYKKVSNLL 620


>gi|356557843|ref|XP_003547220.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic-like [Glycine max]
          Length = 487

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 245/412 (59%), Positives = 300/412 (72%), Gaps = 3/412 (0%)

Query: 312 YARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRR 371
           +A GMI   GSTLFEELGLYYIGPVDGHN+ DL+++L EV +  + GP ++HVVTE+   
Sbjct: 56  HAHGMISSSGSTLFEELGLYYIGPVDGHNMNDLVAILNEVKNTETTGPCVIHVVTEKGHG 115

Query: 372 AEDTQKSEAIEKQQEGASDSNSLPFGN--YSRTYDDCFIEALVMEAEKDKDIVVVHAGME 429
               +++ A          +    F     +++Y   F EAL+ EAE DKDI+ +HA M 
Sbjct: 116 YPYAERAAAKYHVVSKFDPATGEQFKAKATTKSYSTYFAEALIAEAEADKDIIGIHAAMG 175

Query: 430 MDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDV 489
               +  F  +FP R FDVG+AEQHAVTF+AGLAC G KPFC I S+F+QRAYDQVV+DV
Sbjct: 176 GGTGMNHFLRRFPTRCFDVGIAEQHAVTFAAGLACEGFKPFCAINSSFMQRAYDQVVHDV 235

Query: 490 DQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASI 549
           D Q+LPVRF I  AGLVG DG T CGAFD+TFM+CLPNM+VMAPSDE EL  MVAT A+I
Sbjct: 236 DLQKLPVRFGIDRAGLVGPDGCTHCGAFDVTFMACLPNMVVMAPSDEAELFHMVATAAAI 295

Query: 550 DDRPVCFRYPRGAIVRTDL-PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARAL 608
           DDRP CFRYPRG  V  +L PG +GIP+EIGKG++L+EG+ VALLGYG+ VQ+C+ A  L
Sbjct: 296 DDRPSCFRYPRGNGVGVELPPGNKGIPLEIGKGRILIEGERVALLGYGSTVQSCVAAATL 355

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLD 668
           L  LG+  TV +ARFCKPLD  L+R L ++H  LITVEEGSIGGFGSHV+ F+ALDGLLD
Sbjct: 356 LGDLGLHATVVNARFCKPLDHSLIRSLAKSHEVLITVEEGSIGGFGSHVAQFMALDGLLD 415

Query: 669 SGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLLM 720
             +KWRP+VLPD YI+H SP  QL  A LT  HIAAT  +LLG+ RE L +M
Sbjct: 416 GKLKWRPMVLPDCYIDHGSPADQLNEARLTPSHIAATVFNLLGQAREELEVM 467


>gi|61656095|gb|AAX49358.1| 1-deoxy-D-xylulose 5-phosphate synthase 2 [Zea mays]
          Length = 424

 Score =  482 bits (1241), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 249/424 (58%), Positives = 308/424 (72%), Gaps = 10/424 (2%)

Query: 303 HEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLV 362
           HE AAKVDEYARGMI   GS+LFEELGLYYIGPVDGH +EDL+++ ++V S+ + GPVL+
Sbjct: 3   HEVAAKVDEYARGMISASGSSLFEELGLYYIGPVDGHCVEDLVTIFEKVKSMPAPGPVLI 62

Query: 363 HVVTEENRRAEDTQKSEAIEKQQEGA-----SDSNSLPFGNYSRTYDDCFIEALVMEAEK 417
           H+VTE+ +       +EA   +  G      +    L   + + +Y   F E+L+ EAE 
Sbjct: 63  HIVTEKGK---GYPPAEAAADRMHGVVKFEPATGRQLKSKSPTLSYTQYFAESLIREAES 119

Query: 418 DKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAF 477
           D+ +V +HA M     L  FQ++FPER FDVG+AEQHAVTF+AGLA  GLKPFC I S+F
Sbjct: 120 DEKVVAIHAAMGGGTGLNYFQKRFPERCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSF 179

Query: 478 LQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDED 537
           LQR YDQVV+DVD QRLPVRF +  AGLVG+DGPT CGAFD+ +M+CLPNM+VMAP+DE 
Sbjct: 180 LQRGYDQVVHDVDLQRLPVRFALDRAGLVGADGPTHCGAFDVAYMACLPNMVVMAPADEA 239

Query: 538 ELVDMVATVASIDDRPVCFRYPRGAIVRTDL-PGYRGIPIEIGKGKVLVEGKD-VALLGY 595
           EL+ MVAT A+IDDRP CFR+PRG  V   L PG +G+ +E+G+G+VLV G   VALLGY
Sbjct: 240 ELMHMVATAAAIDDRPSCFRFPRGNGVGAALPPGNKGVALEVGRGRVLVGGGTRVALLGY 299

Query: 596 GAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGS 655
           GAMVQ CLKA   L +  + VT ADARFCKPLD  L+REL   H  LIT EEGSIGGFGS
Sbjct: 300 GAMVQACLKAAEALKEHDVYVTAADARFCKPLDTALIRELAAEHEVLITAEEGSIGGFGS 359

Query: 656 HVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTRE 715
           HV+H+++L GLLD  +K R + LPD YI+H +P  Q+  AGLT  HIAAT LSLLGR  E
Sbjct: 360 HVAHYLSLTGLLDGPLKLRSMFLPDRYIDHGAPQDQIEEAGLTPRHIAATVLSLLGRPLE 419

Query: 716 ALLL 719
           A+ L
Sbjct: 420 AMQL 423


>gi|121534495|ref|ZP_01666318.1| deoxyxylulose-5-phosphate synthase [Thermosinus carboxydivorans
           Nor1]
 gi|121306988|gb|EAX47907.1| deoxyxylulose-5-phosphate synthase [Thermosinus carboxydivorans
           Nor1]
          Length = 628

 Score =  481 bits (1238), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 266/637 (41%), Positives = 388/637 (60%), Gaps = 21/637 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           T +LD +E P  LK L++ EL+ LA E+R  L   V+KT   L  +L  VELT+A+H VF
Sbjct: 2   TKLLDTMEQPGDLKKLSLNELENLASEVRELLIHTVAKTGGHLAPNLGVVELTIAIHKVF 61

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
            +P DKI+WDVG Q Y HK+LTGRR+   TLR+  G+SG+  RSESE+D F  GH   S+
Sbjct: 62  DSPRDKIIWDVGHQAYVHKLLTGRRAQFETLRQLGGLSGFPKRSESEHDVFGTGHSSTSI 121

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           S+ LGMA+ARD+ G +  +V VI +G+   GQAYEA+++AG++ SN+ VILND+      
Sbjct: 122 SSALGMALARDLLGAKYHVVAVIGDGSLTGGQAYEALNHAGHMGSNLTVILNDN------ 175

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKR---IGRGMHEWAAKVDEYARG 315
             E S   ++ A+S  L+R++++ ++ +++   + + +R   IG  + + A +V +  + 
Sbjct: 176 --EMSIAKNVGAMSQYLARMRTAPTYSRVKHDIEYLLRRIPAIGDSVAKTAERVKDSLKY 233

Query: 316 MIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDT 375
           ++ P    +FEELG  YIGP+DGHNI  L+ VLQ+  ++   GPVL+HV+T++ +     
Sbjct: 234 LLVP--GVIFEELGFTYIGPIDGHNIASLVDVLQQAKNV--RGPVLIHVLTQKGKGYRPA 289

Query: 376 Q-KSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
           +  ++          ++  +     + TY   F +ALV  AEKD  I+ + A M     L
Sbjct: 290 ECNADKFHGVGPFCVETGEIIKNGVNPTYTAVFGDALVELAEKDDRIIAITAAMPEGTGL 349

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
           + F  +FP R+FDVG+AE HAVT +AG+A  GL+P   I S FLQRAYDQ+V+DV  Q L
Sbjct: 350 KKFAARFPARFFDVGIAEPHAVTMAAGMATQGLRPVVAIYSTFLQRAYDQIVHDVCLQNL 409

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PV F +  AG+VG DGPT  G FD++F+  +PNM++MAP DE+EL  M+ T   ++  PV
Sbjct: 410 PVVFALDRAGIVGEDGPTHHGVFDLSFLRHIPNMVIMAPKDENELRHMLHTALKLNC-PV 468

Query: 555 CFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGI 614
             RYPRG  V   L     + +E+GK +++ +G  +  L  GAMV  CL+A A+L K GI
Sbjct: 469 AIRYPRGNGVGVSLDKVFSL-LEVGKAEIVQQGGKLTFLALGAMVGPCLEAAAILEKRGI 527

Query: 615 DVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVKW 673
              V +ARF KP D  L+R L ++   L+TVE+  + GGFGS V  +I    L    VK 
Sbjct: 528 KAGVVNARFAKPFDAALIRALARDPGMLVTVEDNVLTGGFGSAVLEYINSQNL--QWVKL 585

Query: 674 RPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
             + LPD ++EH S  + LA  GL G  IAA   + +
Sbjct: 586 LRLGLPDTFVEHGSRQELLAKHGLDGAGIAAAVQNFI 622


>gi|395651510|ref|ZP_10439360.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas
           extremaustralis 14-3 substr. 14-3b]
          Length = 631

 Score =  481 bits (1237), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 285/649 (43%), Positives = 385/649 (59%), Gaps = 42/649 (6%)

Query: 76  KEP-TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           K P TP+LD    P  L+ L   EL+ LA E+R EL   V +T     + L  +ELT+AL
Sbjct: 11  KRPSTPLLDRAATPDGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIELTIAL 70

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H+VF  P D+++WDVG Q Y HKILTGRR  + TLR+K GI+ +  RSESEYD F  GH 
Sbjct: 71  HYVFDTPDDRLVWDVGHQAYPHKILTGRRERMSTLRQKGGIAAFPRRSESEYDTFGVGHS 130

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA LGMA+A  ++G     + VI +G   AG A+EA+++A  +D+NM+VILND+  
Sbjct: 131 STSISAALGMAIASRLQGSDRKAIAVIGDGALTAGMAFEALNHAPEVDANMLVILNDNDM 190

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+          ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+
Sbjct: 191 SI--------SRNVGGLSNYLAKILSSRTYASMREGSKKVLSRL-PGAWEIARRTEEYAK 241

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---R 371
           GM+ P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +H+VT++ +    
Sbjct: 242 GMLVP--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDL--KGPQFLHIVTKKGKGFAP 297

Query: 372 AE-DTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
           AE D     AI K +    D+ + P       Y   F E L   A  D  +V +   M+ 
Sbjct: 298 AEVDPIGYHAITKLE--PLDAPAAPKKASGPKYSGVFGEWLCDMAAADPRLVGITPAMKE 355

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L  F E+FP RYFDV +AEQHAVTF+AG+AC G KP   I S FLQRAYDQ+V+DV 
Sbjct: 356 GSDLVAFSERFPLRYFDVAIAEQHAVTFAAGMACEGAKPVVAIYSTFLQRAYDQLVHDVA 415

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q L V F I  AGLVG DGPT  G+FD++++ C+P M+VM PSDE+EL  M++T   + 
Sbjct: 416 VQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDENELRKMLST-GHLY 474

Query: 551 DRPVCFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
           + P   RYPRG    A++  DL      PIEIGKG V  +G   A L +G  +   LK  
Sbjct: 475 NGPAAVRYPRGNGPNAVIEKDL-----APIEIGKGIVRRQGSKTAFLVFGVQLAEALKVA 529

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG 665
                  ID TV D RF KPLD  LVRE+   H  L+TVEE +I GG G+ VS F+A + 
Sbjct: 530 E-----KIDATVVDMRFVKPLDEALVREIAARHELLVTVEENAIMGGAGAAVSEFLAREN 584

Query: 666 LLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATA---LSLLG 711
           +L S +    + LPD Y+EHA P Q LA  GL    I A+    ++LLG
Sbjct: 585 ILKSVLH---LGLPDVYVEHAKPAQMLAECGLDEAGIEASVRERMTLLG 630


>gi|378953115|ref|YP_005210603.1| hypothetical protein PSF113_5228 [Pseudomonas fluorescens F113]
 gi|359763129|gb|AEV65208.1| Dxs [Pseudomonas fluorescens F113]
          Length = 632

 Score =  481 bits (1237), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 285/649 (43%), Positives = 384/649 (59%), Gaps = 41/649 (6%)

Query: 76  KEPT-PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           K PT P+LD    P  L+ L   EL+ LA E+R EL   V +T     + L  +ELT+AL
Sbjct: 11  KRPTTPLLDRANTPDGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIELTIAL 70

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H+VF  P D+++WDVG Q Y HKILTGRR  + TLR+KDGI+ +  RSESEYD F  GH 
Sbjct: 71  HYVFDTPDDRLVWDVGHQAYPHKILTGRRERMGTLRQKDGIAAFPRRSESEYDTFGVGHS 130

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA LGMA+A  ++      + VI +G   AG A+EA+++A  +D+NM+VILND+  
Sbjct: 131 STSISAALGMAIAARLQNSERKAIAVIGDGALTAGMAFEALNHAPEVDANMLVILNDNDM 190

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+          ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+
Sbjct: 191 SI--------SRNVGGLSNYLAKILSSRTYASMREGSKKVLSRL-PGAWEIARRTEEYAK 241

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---R 371
           GM+ P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +HVVT++ +    
Sbjct: 242 GMLVP--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDL--KGPQFLHVVTKKGKGFAP 297

Query: 372 AE-DTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
           AE D     AI K  E      + P       Y   F + L   A  D  +V +   M+ 
Sbjct: 298 AEVDPIGYHAITK-LEPLDAPAATPKKAGGPKYSGVFGQWLCDMAAADPRLVGITPAMKE 356

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L  F E++P+RYFDV +AEQHAVT +AG+AC G KP   I S FLQRAYDQ+++DV 
Sbjct: 357 GSDLVAFSERYPQRYFDVAIAEQHAVTLAAGMACEGAKPVVAIYSTFLQRAYDQLIHDVA 416

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q L V F I  AGLVG DGPT  G+FD++F+ C+P M+VM PSDE+EL  M+ T   + 
Sbjct: 417 VQNLDVLFAIDRAGLVGEDGPTHAGSFDLSFLRCIPGMLVMTPSDENELRKML-TTGHLF 475

Query: 551 DRPVCFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
           + P   RYPRG    A + TDL      PIEIGKG +  +GK  ALL +G  +   LK  
Sbjct: 476 NGPAAVRYPRGTGPNATISTDLE-----PIEIGKGVIRRQGKQTALLVFGVQLAESLKVA 530

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG 665
            +L     D TV D RF KPLD  LVRE+  +H  L+T+EE +I GG G+ VS F+A + 
Sbjct: 531 EIL-----DATVVDMRFVKPLDEALVREMAGSHDLLVTLEENAIMGGAGAAVSEFLAREN 585

Query: 666 LLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATA---LSLLG 711
           +L S +    + LPD Y+EHA P Q LA  GL    I A     L LLG
Sbjct: 586 ILKSVLH---LGLPDTYVEHAKPAQMLAECGLDEAGIEAAVRQRLQLLG 631


>gi|395498974|ref|ZP_10430553.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. PAMC
           25886]
          Length = 632

 Score =  480 bits (1235), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 287/653 (43%), Positives = 386/653 (59%), Gaps = 43/653 (6%)

Query: 76  KEP-TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           K P TP+LD    P  L+ L   EL+ LA E+R EL   V +T     + L  +ELT+AL
Sbjct: 11  KRPATPLLDRANTPAGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIELTIAL 70

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H+VF  P D+++WDVG Q Y HKILTGRR  + TLR+KDGI+ +  RSESEYD F  GH 
Sbjct: 71  HYVFDTPDDRLVWDVGHQAYPHKILTGRRERMATLRQKDGIAAFPRRSESEYDTFGVGHS 130

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA LGMA+A  ++      + VI +G   AG A+EA+++A  +D+NM+VILND+  
Sbjct: 131 STSISAALGMAIAARLQNSDRKAIAVIGDGALTAGMAFEALNHAPEVDANMLVILNDNDM 190

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+          ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+
Sbjct: 191 SI--------SRNVGGLSNYLAKILSSRTYASMREGSKKVLSRL-PGAWEIARRTEEYAK 241

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---R 371
           GM+ P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +H+VT++ +    
Sbjct: 242 GMLVP--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDL--KGPQFLHIVTKKGKGFAP 297

Query: 372 AE-DTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
           AE D     AI K  E  +   + P       Y   F E L   A  D  +V +   M+ 
Sbjct: 298 AEVDPIGYHAITK-LEPLNAPAAAPKKPSGPKYSGVFGEWLCDMAAADPRLVGITPAMKE 356

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L  F E+FP RYFDV +AEQHAVTF+AG+AC G KP   I S FLQR YDQ+++DV 
Sbjct: 357 GSDLVAFSERFPLRYFDVAIAEQHAVTFAAGMACEGAKPVVAIYSTFLQRGYDQLIHDVA 416

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q L V F I  AGLVG DGPT  G+FD++++ C+P M+VM PSDE+EL  M++T   + 
Sbjct: 417 VQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDENELRKMLST-GHLY 475

Query: 551 DRPVCFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
           + P   RYPRG    A++  DL      PIEIGKG V  +G  VALL +G  +   LK  
Sbjct: 476 NGPAAVRYPRGNGPNAVIEKDLE-----PIEIGKGIVRRQGSGVALLVFGVQLAEALKVA 530

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG 665
                  ID TV D RF KPLD  LVRE+  +H  L+TVEE +I GG G+ VS F+A + 
Sbjct: 531 E-----KIDATVVDMRFVKPLDEALVREIAGSHELLVTVEENAIMGGAGAAVSEFLAREN 585

Query: 666 LLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALL 718
           +L S +    + LPD Y+EHA P Q LA  GL    I A+      R R ALL
Sbjct: 586 ILKSVLH---LGLPDVYVEHAKPAQMLAECGLDEAGIEASV-----RQRMALL 630


>gi|395797727|ref|ZP_10477015.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. Ag1]
 gi|395338095|gb|EJF69948.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. Ag1]
          Length = 632

 Score =  479 bits (1233), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 286/653 (43%), Positives = 386/653 (59%), Gaps = 43/653 (6%)

Query: 76  KEP-TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           K P TP+LD    P  L+ L   EL+ LA E+R EL   V +T     + L  +ELT+AL
Sbjct: 11  KRPATPLLDRANTPAGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIELTIAL 70

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H+VF  P D+++WDVG Q Y HKILTGRR  + TLR+KDGI+ +  RSESEYD F  GH 
Sbjct: 71  HYVFDTPDDRLVWDVGHQAYPHKILTGRRERMATLRQKDGIAAFPRRSESEYDTFGVGHS 130

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA LGMA+A  ++      + VI +G   AG A+EA+++A  +D+NM+VILND+  
Sbjct: 131 STSISAALGMAIAARLQNSDRKAIAVIGDGALTAGMAFEALNHAPEVDANMLVILNDNDM 190

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+          ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+
Sbjct: 191 SI--------SRNVGGLSNYLAKILSSRTYASMREGSKKVLSRL-PGAWEIARRTEEYAK 241

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---R 371
           GM+ P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +H+VT++ +    
Sbjct: 242 GMLVP--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDL--KGPQFLHIVTKKGKGFAP 297

Query: 372 AE-DTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
           AE D     AI K  E  +   + P       Y   F E L   A  D  +V +   M+ 
Sbjct: 298 AEVDPIGYHAITK-LEPLNAPAAAPKKPSGPKYSGVFGEWLCDMAAADPRLVGITPAMKE 356

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L  F E+FP RYFDV +AEQHAVTF+AG+AC G KP   I S FLQR YDQ+++DV 
Sbjct: 357 GSDLVAFSERFPLRYFDVAIAEQHAVTFAAGMACEGAKPVVAIYSTFLQRGYDQLIHDVA 416

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q L V F I  AGLVG DGPT  G+FD++++ C+P M+VM PSDE+EL  M++T   + 
Sbjct: 417 VQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDENELRKMLST-GHLY 475

Query: 551 DRPVCFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
           + P   RYPRG    A++  DL      PIEIGKG V  +G  VALL +G  +   LK  
Sbjct: 476 NGPAAVRYPRGNGPNAVIEKDLE-----PIEIGKGIVRRQGSGVALLVFGVQLAEALKVA 530

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG 665
                  ID TV D RF KPLD  LVRE+  +H  L+T+EE +I GG G+ VS F+A + 
Sbjct: 531 E-----KIDATVVDMRFVKPLDEALVREIAGSHELLVTIEENAIMGGAGAAVSEFLAREN 585

Query: 666 LLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALL 718
           +L S +    + LPD Y+EHA P Q LA  GL    I A+      R R ALL
Sbjct: 586 ILKSVLH---LGLPDVYVEHAKPAQMLAECGLDESGIEASV-----RQRMALL 630


>gi|421139008|ref|ZP_15599054.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fluorescens
           BBc6R8]
 gi|404509731|gb|EKA23655.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fluorescens
           BBc6R8]
          Length = 632

 Score =  479 bits (1232), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 286/653 (43%), Positives = 386/653 (59%), Gaps = 43/653 (6%)

Query: 76  KEP-TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           K P TP+LD    P  L+ L   EL+ LA E+R EL   V +T     + L  +ELT+AL
Sbjct: 11  KRPATPLLDRANTPAGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIELTIAL 70

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H+VF  P D+++WDVG Q Y HKILTGRR  + TLR+KDGI+ +  RSESEYD F  GH 
Sbjct: 71  HYVFDTPDDRLVWDVGHQAYPHKILTGRRERMATLRQKDGIAAFPRRSESEYDTFGVGHS 130

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA LGMA+A  ++      + VI +G   AG A+EA+++A  +D+NM+VILND+  
Sbjct: 131 STSISAALGMAIAARLQNSDRKAIAVIGDGALTAGMAFEALNHAPEVDANMLVILNDNDM 190

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+          ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+
Sbjct: 191 SI--------SRNVGGLSNYLAKILSSRTYASMREGSKKVLSRL-PGAWEIARRTEEYAK 241

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---R 371
           GM+ P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +H+VT++ +    
Sbjct: 242 GMLVP--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDL--KGPQFLHIVTKKGKGFAP 297

Query: 372 AE-DTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
           AE D     AI K  E  +   + P       Y   F E L   A  D  +V +   M+ 
Sbjct: 298 AEVDPIGYHAITK-LEPLNAPAAAPKKPSGPKYSGVFGEWLCDMASADPRLVGITPAMKE 356

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L  F E+FP RYFDV +AEQHAVTF+AG+AC G KP   I S FLQR YDQ+++DV 
Sbjct: 357 GSDLVAFSERFPLRYFDVAIAEQHAVTFAAGMACEGAKPVVAIYSTFLQRGYDQLIHDVA 416

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q L V F I  AGLVG DGPT  G+FD++++ C+P M+VM PSDE+EL  M++T   + 
Sbjct: 417 VQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDENELRKMLST-GHLY 475

Query: 551 DRPVCFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
           + P   RYPRG    A++  DL      PIEIGKG V  +G  VALL +G  +   LK  
Sbjct: 476 NGPAAVRYPRGNGPNAVIEKDLE-----PIEIGKGIVRRQGSGVALLVFGVQLAEALKVA 530

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG 665
                  ID TV D RF KPLD  LVRE+  +H  L+T+EE +I GG G+ VS F+A + 
Sbjct: 531 E-----KIDATVVDMRFVKPLDEALVREIAGSHELLVTLEENAIMGGAGAAVSEFLAREN 585

Query: 666 LLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALL 718
           +L S +    + LPD Y+EHA P Q LA  GL    I A+      R R ALL
Sbjct: 586 ILKSVLH---LGLPDVYVEHAKPAQMLAECGLDESGIEASV-----RQRMALL 630


>gi|410091964|ref|ZP_11288508.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas viridiflava
           UASWS0038]
 gi|409760707|gb|EKN45831.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas viridiflava
           UASWS0038]
          Length = 631

 Score =  477 bits (1228), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 282/645 (43%), Positives = 387/645 (60%), Gaps = 40/645 (6%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD    P  L+ L   EL+ LA E+R EL   V +T     + L  +ELT+ALH+VF
Sbjct: 15  TPLLDRANTPDGLRLLGEAELETLADELRLELLYSVGQTGGHFGAGLGVIELTIALHYVF 74

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR+ + TLR+KDG++ +  RSESEYD F  GH   S+
Sbjct: 75  DTPDDRLVWDVGHQAYPHKILTGRRARMSTLRQKDGVAAFPRRSESEYDTFGVGHSSTSI 134

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LGMA+A  ++G     + VI +G   AG A+EA+++A  + +NM+VILND+  S+  
Sbjct: 135 SAALGMAIASRLQGSDRKSIAVIGDGALTAGMAFEALNHAPEVAANMLVILNDNDMSI-- 192

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                   ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+GM+ 
Sbjct: 193 ------SRNVGGLSNYLAKILSSRTYASMREGSKKVLSRL-PGAWEIARRTEEYAKGMLV 245

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---RAE-D 374
           P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +HVVT++ +    AE D
Sbjct: 246 P--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDL--KGPQFLHVVTKKGKGFGPAEVD 301

Query: 375 TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
                AI K  E  +   ++P       Y   F + L   AE D  +V +   M+    L
Sbjct: 302 PIGYHAITK-LEPLNAPVAIPKKVSGPKYSGVFGQWLCDMAEADSRLVGITPAMKEGSDL 360

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F E++PERYFDV +AEQHAVT +AG+AC G KP   I S FLQR YDQ+V+DV  Q L
Sbjct: 361 VDFSERYPERYFDVAIAEQHAVTLAAGMACEGSKPVVAIYSTFLQRGYDQLVHDVAVQNL 420

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
            V F I  AGLVG DGPT  G+FD++++ C+P M+VM PSDE+EL  M+ T   + + P 
Sbjct: 421 DVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMVVMTPSDENELRKMLNT-GYLHNGPA 479

Query: 555 CFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLS 610
             RYPRG    A++  DL      P+EIGKG V  +G+ VA+L +G  +     A AL+ 
Sbjct: 480 AVRYPRGTGPNAVIEKDLE-----PVEIGKGMVRRQGQGVAILVFGVQL-----AEALVV 529

Query: 611 KLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDS 669
              +D TV D RF KPLD  LVRE   NH  L+T+EE +I GG G+ VS F+A + +L S
Sbjct: 530 AQKLDATVIDMRFVKPLDEALVREAAANHELLVTLEENAIMGGAGAAVSEFLARENILKS 589

Query: 670 GVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATA---LSLLG 711
            +    I LPD Y+EHA P Q LA  GL    I A     L+L+G
Sbjct: 590 VLH---IGLPDVYVEHAKPAQMLAECGLDAPGIEAAINKRLTLIG 631


>gi|330812002|ref|YP_004356464.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
 gi|327380110|gb|AEA71460.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
          Length = 632

 Score =  477 bits (1227), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 280/632 (44%), Positives = 378/632 (59%), Gaps = 38/632 (6%)

Query: 76  KEPT-PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           K PT P+LD    P  L+ L   EL+ LA E+R EL   V +T     + L  +ELT+AL
Sbjct: 11  KRPTTPLLDRANTPDGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIELTIAL 70

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H+VF  P D+++WDVG Q Y HKILTGRR  + TLR+KDGI+ +  RSESEYD F  GH 
Sbjct: 71  HYVFDTPDDRLVWDVGHQAYPHKILTGRRERMGTLRQKDGIAAFPRRSESEYDTFGVGHS 130

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA LGMA+A  ++      + VI +G   AG A+EA+++A  +D+NM+VILND+  
Sbjct: 131 STSISAALGMAIAARLQNSERKAIAVIGDGALTAGMAFEALNHAPEVDANMLVILNDNDM 190

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+          ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+
Sbjct: 191 SI--------SRNVGGLSNYLAKILSSRTYASMREGSKKVLSRL-PGAWEIARRTEEYAK 241

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---R 371
           GM+ P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +HVVT++ +    
Sbjct: 242 GMLVP--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDL--KGPQFLHVVTKKGKGFAP 297

Query: 372 AE-DTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
           AE D     AI K  E      + P       Y   F + L   A  D  +V +   M+ 
Sbjct: 298 AEVDPIGYHAITK-LEPLDAPAAAPKKAGGPKYSGVFGQWLCDMAAADPRLVGITPAMKE 356

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L  F E++P+RYFDV +AEQHAVT +AG+AC G KP   I S FLQRAYDQ+++DV 
Sbjct: 357 GSDLVAFSERYPQRYFDVAIAEQHAVTLAAGMACEGAKPVVAIYSTFLQRAYDQLIHDVA 416

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q L V F I  AGLVG DGPT  G+FD++F+ C+P M+VM PSDE+EL  M+ T   + 
Sbjct: 417 VQNLDVLFAIDRAGLVGEDGPTHAGSFDLSFLRCIPGMLVMTPSDENELRKML-TTGHLF 475

Query: 551 DRPVCFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
           + P   RYPRG    A + TDL      PIEIGKG +  +GK  ALL +G  +   LK  
Sbjct: 476 NGPAAVRYPRGTGPNAPISTDLE-----PIEIGKGVIRRQGKQTALLVFGVQLAEALKVA 530

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG 665
             L     D TV D RF KPLD  LVRE+  +H  L+TVEE +I GG G+ VS F+A + 
Sbjct: 531 ETL-----DATVVDMRFVKPLDEALVREMAGSHDLLVTVEENAIMGGAGAAVSEFLAREN 585

Query: 666 LLDSGVKWRPIVLPDNYIEHASPTQQLALAGL 697
           +L S +    + LPD+Y+EHA P Q LA  GL
Sbjct: 586 ILKSVLH---LGLPDSYVEHAKPAQMLAECGL 614


>gi|152984765|ref|YP_001346443.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           PA7]
 gi|166201528|sp|A6V058.1|DXS_PSEA7 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|150959923|gb|ABR81948.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           PA7]
          Length = 627

 Score =  477 bits (1227), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 272/632 (43%), Positives = 380/632 (60%), Gaps = 40/632 (6%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           ++  TP+LD   +P  L+ L   +L+ LA E+R  L   V +T     + L  VELT+AL
Sbjct: 11  ERPATPLLDRASSPAELRRLGEADLETLADELRQYLLYTVGQTGGHFGAGLGVVELTIAL 70

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H+VF  P D+++WDVG Q Y HKILT RR L+ TLR+KDG++ +  R+ESEYD F  GH 
Sbjct: 71  HYVFDTPDDRLVWDVGHQAYPHKILTERRELMGTLRQKDGLAAFPRRAESEYDTFGVGHS 130

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA LGMA+A  ++GK    V VI +G   AG A+EA+++A  +D++M+VILND+  
Sbjct: 131 STSISAALGMAIAARLQGKERKSVAVIGDGALTAGMAFEALNHASEVDADMLVILNDNDM 190

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+          ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+
Sbjct: 191 SI--------SHNVGGLSNYLAKILSSRTYSSMREGSKKVLSRL-PGAWEIARRTEEYAK 241

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---R 371
           GM+ P   TLFEELG  YIGP+DGH++  L++ L+ +  +   GP  +HVVT++ +    
Sbjct: 242 GMLVP--GTLFEELGWNYIGPIDGHDLPTLVATLRNMRDM--KGPQFLHVVTKKGKGFAP 297

Query: 372 AE-DTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
           AE D     AI K +       S P       Y   F + L   A +D  ++ +   M+ 
Sbjct: 298 AELDPIGYHAITKLEA----PGSAPKKTGGPKYSSVFGQWLCDMAAQDARLLGITPAMKE 353

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L  F E++PERYFDV +AEQHAVT +AG+AC G+KP   I S FLQRAYDQ+++DV 
Sbjct: 354 GSDLVAFSERYPERYFDVAIAEQHAVTLAAGMACEGMKPVVAIYSTFLQRAYDQLIHDVA 413

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q L V F I  AGLVG DGPT  G+FDI+++ C+P M+VM PSDEDEL  ++ T   + 
Sbjct: 414 VQHLDVLFAIDRAGLVGEDGPTHAGSFDISYLRCIPGMLVMTPSDEDELRKLL-TTGYLF 472

Query: 551 DRPVCFRYPRGA----IVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
           D P   RYPRG+     +  DL      P+EIGKG V   G  VALL +G  +   +K  
Sbjct: 473 DGPAAVRYPRGSGPNHPIDPDLQ-----PVEIGKGVVRRRGGKVALLVFGVQLAEAMKVA 527

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG 665
                 G+D TVAD RF KPLD  LVREL  +H  L+++EE ++ GG GS V  F+A +G
Sbjct: 528 E-----GLDATVADMRFVKPLDEALVRELAGSHELLVSIEENAVMGGAGSAVGEFLAREG 582

Query: 666 LLDSGVKWRPIVLPDNYIEHASPTQQLALAGL 697
           L    V    + LPD Y+EHA P++ LA  GL
Sbjct: 583 L---EVPLLQLGLPDYYVEHAKPSEMLAECGL 611


>gi|452879303|ref|ZP_21956424.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           VRFPA01]
 gi|452184117|gb|EME11135.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           VRFPA01]
          Length = 627

 Score =  476 bits (1226), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 272/632 (43%), Positives = 380/632 (60%), Gaps = 40/632 (6%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           ++  TP+LD   +P  L+ L   +L+ LA E+R  L   V +T     + L  VELT+AL
Sbjct: 11  ERPATPLLDRASSPAELRRLGEADLETLADELRQYLLYTVGQTGGHFGAGLGVVELTIAL 70

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H+VF  P D+++WDVG Q Y HKILT RR L+ TLR+KDG++ +  R+ESEYD F  GH 
Sbjct: 71  HYVFDTPDDRLVWDVGHQAYPHKILTERRELMGTLRQKDGLAAFPRRAESEYDTFGVGHS 130

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA LGMA+A  ++GK    V VI +G   AG A+EA+++A  +D++M+VILND+  
Sbjct: 131 STSISAALGMAIAARLQGKERKSVAVIGDGALTAGMAFEALNHASEVDADMLVILNDNDM 190

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+          ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+
Sbjct: 191 SI--------SHNVGGLSNYLAKILSSRTYSSMREGSKKVLSRL-PGAWEIARRTEEYAK 241

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---R 371
           GM+ P   TLFEELG  YIGP+DGH++  L++ L+ +  +   GP  +HVVT++ +    
Sbjct: 242 GMLVP--GTLFEELGWNYIGPIDGHDLPTLVATLRNMRDM--KGPQFLHVVTKKGKGFAP 297

Query: 372 AE-DTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
           AE D     AI K +       S P       Y   F + L   A +D  ++ +   M+ 
Sbjct: 298 AELDPIGYHAITKLEA----PGSAPKKTGGPKYSSVFGQWLCDMAAQDARLLGITPAMKE 353

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L  F E++PERYFDV +AEQHAVT +AG+AC G+KP   I S FLQRAYDQ+++DV 
Sbjct: 354 GSDLVAFSERYPERYFDVAIAEQHAVTLAAGMACEGMKPVVAIYSTFLQRAYDQLIHDVA 413

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q L V F I  AGLVG DGPT  G+FDI+++ C+P M+VM PSDEDEL  ++ T   + 
Sbjct: 414 VQHLDVLFAIDRAGLVGEDGPTHAGSFDISYLRCIPGMLVMTPSDEDELRKLL-TTGYLF 472

Query: 551 DRPVCFRYPRGA----IVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
           D P   RYPRG+     +  DL      P+EIGKG V   G  VALL +G  +   +K  
Sbjct: 473 DGPAAVRYPRGSGPNHPIDPDLQ-----PVEIGKGVVRRRGGKVALLVFGVQLAEAMKVA 527

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG 665
                 G+D TVAD RF KPLD  LVREL  +H  L+++EE ++ GG GS V  F+A +G
Sbjct: 528 E-----GLDATVADMRFVKPLDEALVRELAGSHELLVSIEENAVMGGAGSAVGEFLAREG 582

Query: 666 LLDSGVKWRPIVLPDNYIEHASPTQQLALAGL 697
           L    V    + LPD Y+EHA P++ LA  GL
Sbjct: 583 L---EVPLLQLGLPDYYVEHAKPSEMLAECGL 611


>gi|423699565|ref|ZP_17674055.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fluorescens
           Q8r1-96]
 gi|387996687|gb|EIK58017.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fluorescens
           Q8r1-96]
          Length = 632

 Score =  476 bits (1226), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 279/632 (44%), Positives = 378/632 (59%), Gaps = 38/632 (6%)

Query: 76  KEPT-PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           K PT P+LD    P  L+ L   EL+ LA E+R EL   V +T     + L  +ELT+AL
Sbjct: 11  KRPTTPLLDRANTPDGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIELTIAL 70

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H+VF  P D+++WDVG Q Y HKILTGRR  + TLR+KDGI+ +  RSESEYD F  GH 
Sbjct: 71  HYVFDTPDDRLVWDVGHQAYPHKILTGRRERMGTLRQKDGIAAFPRRSESEYDTFGVGHS 130

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA LGMA+A  ++      + VI +G   AG A+EA+++A  +D+NM+VILND+  
Sbjct: 131 STSISAALGMAIAARLQNSERKAIAVIGDGALTAGMAFEALNHAPEVDANMLVILNDNDM 190

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+          ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+
Sbjct: 191 SI--------SRNVGGLSNYLAKILSSRTYASMREGSKKVLSRL-PGAWEIARRTEEYAK 241

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---R 371
           GM+ P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +HVVT++ +    
Sbjct: 242 GMLVP--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDL--KGPQFLHVVTKKGKGFAP 297

Query: 372 AE-DTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
           AE D     AI K  E      + P       Y   F + L   A  D  +V +   M+ 
Sbjct: 298 AEVDPIGYHAITK-LEPLDAPAAAPKKAGGPKYSGVFGQWLCDMAAADPRLVGITPAMKE 356

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L  F E++P+RYFDV +AEQHAVT +AG+AC G KP   I S FLQRAYDQ+++DV 
Sbjct: 357 GSDLVAFSERYPQRYFDVAIAEQHAVTLAAGMACEGAKPVVAIYSTFLQRAYDQLIHDVA 416

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q L V F I  AGLVG DGPT  G+FD++F+ C+P M+VM PSDE+EL  M+ T   + 
Sbjct: 417 VQNLDVLFAIDRAGLVGEDGPTHAGSFDLSFLRCIPGMLVMTPSDENELRKML-TTGHLF 475

Query: 551 DRPVCFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
           + P   RYPRG    A + TDL      PIEIGKG +  +GK  ALL +G  +   LK  
Sbjct: 476 NGPAAVRYPRGTGPNATISTDLE-----PIEIGKGVIRRQGKHTALLVFGVQLAEALKVA 530

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG 665
             L     D TV D RF KPLD  LVRE+  +H  L+T+EE +I GG G+ VS F+A + 
Sbjct: 531 ETL-----DATVVDMRFVKPLDEALVREMAGSHDLLVTLEENAIMGGAGAAVSEFLAREN 585

Query: 666 LLDSGVKWRPIVLPDNYIEHASPTQQLALAGL 697
           +L S +    + LPD+Y+EHA P Q LA  GL
Sbjct: 586 ILKSVLH---LGLPDSYVEHAKPAQMLAECGL 614


>gi|404401537|ref|ZP_10993121.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fuscovaginae
           UPB0736]
          Length = 632

 Score =  476 bits (1226), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 286/649 (44%), Positives = 388/649 (59%), Gaps = 41/649 (6%)

Query: 76  KEPT-PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           K PT P+LD  + P  L+ L   EL+ LA E+R EL   V +T     + L  +ELT+AL
Sbjct: 11  KRPTTPLLDRADTPAGLRRLGEAELETLADELRQELLYSVGQTGGHFGAGLGVIELTIAL 70

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H+VF  P D+++WDVG Q Y HKILTGRR  +HTLR+KDG++ +  R+ESEYD F  GH 
Sbjct: 71  HYVFDTPDDRLVWDVGHQAYPHKILTGRRERMHTLRQKDGLAAFPRRTESEYDTFGVGHS 130

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA LGMA+A  ++      + VI +G   AG A+EA+++A  +D+NM+VILND+  
Sbjct: 131 STSISAALGMAIAARLQNSDRKAIAVIGDGALTAGMAFEALNHAPEVDANMLVILNDNDM 190

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+          ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+
Sbjct: 191 SI--------SRNVGGLSNYLAKILSSRTYASMREGSKKVLSRL-PGAWEIARRTEEYAK 241

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---R 371
           GM+ P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +HVVT++ +    
Sbjct: 242 GMLVP--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDL--KGPQFLHVVTKKGKGFAP 297

Query: 372 AE-DTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
           AE D     AI K  E      + P       Y   F E L   A  D  +V +   M+ 
Sbjct: 298 AEVDPIGYHAITK-LEPLDAPAAAPKKASGPKYSAVFGEWLCDMAAADPRLVGITPAMKE 356

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L  F E+FP RYFDV +AEQHAVTF+AG+AC G KP   I S FLQR YDQ+V+DV 
Sbjct: 357 GSDLVAFSERFPLRYFDVAIAEQHAVTFAAGMACEGAKPVVAIYSTFLQRGYDQLVHDVA 416

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q L V F I  AGLVG DGPT  G+FD++++ C+P M+VM PSDE+EL  M++T    +
Sbjct: 417 VQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDENELRKMLSTGHRYN 476

Query: 551 DRPVCFRYPRGAIVRTDLPGYRGI-PIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALL 609
             P   RYPRG+    + P  + + PIEIGKG V  +G  VALL +G  +     A AL+
Sbjct: 477 G-PAAVRYPRGS--GPNAPIEKNLEPIEIGKGVVRRQGSKVALLVFGVQL-----AEALV 528

Query: 610 SKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLD 668
               +D TV D RF KPLD  LVRE+  +H  L+T+EE +I GG G+ VS F+A D LL 
Sbjct: 529 VAEKLDATVVDMRFVKPLDEALVREIAGSHELLVTIEENAIMGGAGAAVSEFLAQDNLL- 587

Query: 669 SGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAATA---LSLLG 711
                +PI+   LPD Y+EHA P Q LA  GL    I A+    + LLG
Sbjct: 588 -----KPILHLGLPDAYVEHAKPAQMLAECGLDVAGIEASVTARMKLLG 631


>gi|447918528|ref|YP_007399096.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas poae
           RE*1-1-14]
 gi|445202391|gb|AGE27600.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas poae
           RE*1-1-14]
          Length = 632

 Score =  476 bits (1224), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 281/664 (42%), Positives = 383/664 (57%), Gaps = 72/664 (10%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD    P  L+ L   EL+ LA E+R EL   V +T     + L  +ELT+ALH+VF
Sbjct: 15  TPLLDRAATPDGLRRLAEAELETLADELRLELLYTVGQTGGHFGAGLGVIELTIALHYVF 74

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR  +++LR+KDGI+ +  R+ESEYD F  GH   S+
Sbjct: 75  DTPDDRLVWDVGHQAYPHKILTGRRERMNSLRQKDGIAAFPRRAESEYDTFGVGHSSTSI 134

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LGMA+A  ++G     + VI +G   AG A+EA+++A  +D+NM+VILND+  S+  
Sbjct: 135 SAALGMAIAARLQGSERKAIAVIGDGALTAGMAFEALNHAPEVDANMLVILNDNDMSI-- 192

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                   ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+GM+ 
Sbjct: 193 ------SRNVGGLSNYLAKILSSRTYASMREGSKKVLSRL-PGAWEIARRTEEYAKGMLV 245

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
           P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +H+VT            
Sbjct: 246 P--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDL--KGPQFLHIVT------------ 289

Query: 379 EAIEKQQEGASDSNSLPFGNYSRT-------------------YDDCFIEALVMEAEKDK 419
               K+ +G + +   P G ++ T                   Y   F E L   A  D 
Sbjct: 290 ----KKGKGFAPAEVDPIGYHAITKLDPLDAPAAAPKKASGPKYSGVFGEWLCDMAAADP 345

Query: 420 DIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQ 479
            +V V   M+    L  F E+FP RYFDV +AEQHAVTF+AG+AC G KP   I S FLQ
Sbjct: 346 RLVGVTPAMKEGSDLVAFSERFPLRYFDVAIAEQHAVTFAAGMACEGAKPVVAIYSTFLQ 405

Query: 480 RAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDEL 539
           R YDQ+V+DV  Q L V F I  AGLVG DGPT  G+FD++++ C+P M+VM PSDE+EL
Sbjct: 406 RGYDQLVHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDENEL 465

Query: 540 VDMVATVASIDDRPVCFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGY 595
             M++T   + + P   RYPRG    A++  DL      PIEIGKG V  +G +VA L +
Sbjct: 466 RKMLST-GHLYNGPAAVRYPRGTGPNAVIEKDLE-----PIEIGKGIVRRQGSNVAFLVF 519

Query: 596 GAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFG 654
           G  +   LK         ID TV D RF KPLD  LVRE+  +H  L+TVEE +I GG G
Sbjct: 520 GVQLAEALKVAE-----KIDATVVDMRFVKPLDEALVREIAGSHELLVTVEENAIMGGAG 574

Query: 655 SHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTR 714
           + VS F+A + +L S +    + LPD Y+EHA P Q LA  GL    I  +      R R
Sbjct: 575 AAVSEFLARENILKSVLH---LGLPDVYVEHAKPAQMLAECGLDEAGIETSV-----RAR 626

Query: 715 EALL 718
            ALL
Sbjct: 627 MALL 630


>gi|398886803|ref|ZP_10641657.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM60]
 gi|398187958|gb|EJM75281.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM60]
          Length = 632

 Score =  476 bits (1224), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 283/640 (44%), Positives = 378/640 (59%), Gaps = 38/640 (5%)

Query: 76  KEPT-PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           K PT P+LD    P  L+ L   EL+ LA E+R EL   V +T     + L  +ELT+AL
Sbjct: 11  KRPTTPLLDRANTPDGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIELTIAL 70

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H+VF  P D+++WDVG Q Y HKILTGRR  + TLR+KDG++ +  RSESEYD F  GH 
Sbjct: 71  HYVFDTPDDRLVWDVGHQAYPHKILTGRRERMGTLRQKDGVAAFPRRSESEYDTFGVGHS 130

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA LGMA+A  ++      + VI +G   AG A+EA+++A  +D+NM+VILND+  
Sbjct: 131 STSISAALGMAIAARLQNSDRKAIAVIGDGALTAGMAFEALNHAPEVDANMLVILNDNDM 190

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+          ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+
Sbjct: 191 SI--------SRNVGGLSNYLAKILSSRTYASMREGSKKVLSRL-PGAWEIARRTEEYAK 241

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---R 371
           GM+ P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +H+VT++ +    
Sbjct: 242 GMLVP--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDL--KGPQFLHIVTKKGKGFAP 297

Query: 372 AE-DTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
           AE D     AI K  E      + P       Y   F E L   A  D  +V +   M+ 
Sbjct: 298 AEVDPIGYHAITK-LEPLDAPAAAPKKASGPKYSGVFGEWLCDMAATDPRLVGITPAMKE 356

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L  F E+FP RYFDV +AEQHAVTF+AG+AC G KP   I S FLQR YDQ+V+DV 
Sbjct: 357 GSDLVAFSERFPLRYFDVAIAEQHAVTFAAGMACEGAKPVVAIYSTFLQRGYDQLVHDVA 416

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q L V F I  AGLVG DGPT  G+FD++F+ C+P M+VM PSDE+EL  M+ T   + 
Sbjct: 417 VQNLDVLFAIDRAGLVGEDGPTHAGSFDLSFLRCIPGMLVMTPSDENELRKML-TTGHLY 475

Query: 551 DRPVCFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
           + P   RYPRG    A +  DL      PIEIGKG V  +G  VALL +G  +   LK  
Sbjct: 476 NGPAAVRYPRGNGPNATIEKDLQ-----PIEIGKGVVRRQGSKVALLVFGVQLAEALKVA 530

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG 665
             L     D TV D RF KPLD +LVRE+  NH  L+T+EE +I GG G  VS F+A + 
Sbjct: 531 ETL-----DATVVDMRFVKPLDEELVREIAGNHELLVTIEENAIMGGAGGAVSEFLAREN 585

Query: 666 LLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAAT 705
           +L S +    + LPD Y+EHA P Q LA  GL    I A+
Sbjct: 586 ILKSVLH---LGLPDLYVEHAKPAQMLAECGLDEAGIEAS 622


>gi|426411714|ref|YP_007031813.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. UW4]
 gi|426269931|gb|AFY22008.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. UW4]
          Length = 632

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 281/640 (43%), Positives = 378/640 (59%), Gaps = 38/640 (5%)

Query: 76  KEPT-PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           K PT P+LD    P  L+ L   EL+ LA E+R EL   V +T     + L  +ELT+AL
Sbjct: 11  KRPTTPLLDRANTPDGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIELTIAL 70

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H+VF  P D+++WDVG Q Y HKILTGRR  + TLR+KDG++ +  RSESEYD F  GH 
Sbjct: 71  HYVFDTPDDRLVWDVGHQAYPHKILTGRRERMGTLRQKDGVAAFPRRSESEYDTFGVGHS 130

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA LGMA+A  ++      + VI +G   AG A+EA+++A  +D+NM+VILND+  
Sbjct: 131 STSISAALGMAIAARLQNSERKAIAVIGDGALTAGMAFEALNHAPEVDANMLVILNDNDM 190

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+          ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+
Sbjct: 191 SI--------SRNVGGLSNYLAKILSSRTYASMREGSKKVLSRL-PGAWEIARRTEEYAK 241

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---R 371
           GM+ P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +HVVT++ +    
Sbjct: 242 GMLVP--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDL--KGPQFLHVVTKKGKGFAP 297

Query: 372 AE-DTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
           AE D     AI K +   + + + P       Y   F E L   A  D  +V +   M+ 
Sbjct: 298 AEVDPIGYHAITKLEPLDAPATA-PKKASGPKYSGVFGEWLCDMAAADPRLVGITPAMKE 356

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L  F E+FP RYFDV +AEQHAVT +AG+AC G KP   I S FLQR YDQ+V+DV 
Sbjct: 357 GSDLVAFSERFPLRYFDVAIAEQHAVTLAAGMACEGAKPVVAIYSTFLQRGYDQLVHDVA 416

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q L V F I  AGLVG DGPT  G+FD++F+ C+P M+VM PSDE+EL  M+ T   + 
Sbjct: 417 VQNLDVLFAIDRAGLVGEDGPTHAGSFDLSFLRCIPGMLVMTPSDENELRKML-TTGHLY 475

Query: 551 DRPVCFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
           + P   RYPRG    A +  DL      PIEIGKG V  +G  VALL +G  +   LK  
Sbjct: 476 EGPAAVRYPRGNGPNATIEKDLE-----PIEIGKGVVRRQGSKVALLVFGVQLAEALKVA 530

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG 665
             L     D TV D RF KPLD  LVRE+  +H  L+TVEE ++ GG G  VS F+A + 
Sbjct: 531 ETL-----DATVVDMRFVKPLDEALVREIAGSHELLVTVEENAVMGGAGGAVSEFLAREN 585

Query: 666 LLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAAT 705
           +L S +    + LPD Y+EHA P Q LA  GL    I A+
Sbjct: 586 ILKSMLH---LGLPDIYVEHAKPAQMLAECGLNEAGIEAS 622


>gi|398858336|ref|ZP_10614028.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM79]
 gi|398239648|gb|EJN25355.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM79]
          Length = 632

 Score =  474 bits (1221), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 282/632 (44%), Positives = 376/632 (59%), Gaps = 38/632 (6%)

Query: 76  KEPT-PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           K PT P+LD    P  L+ L   EL+ LA E+R EL   V +T     + L  +ELT+AL
Sbjct: 11  KRPTTPLLDRANTPDGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIELTIAL 70

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H+VF  P D+++WDVG Q Y HKILTGRR  + TLR+KDG++ +  RSESEYD F  GH 
Sbjct: 71  HYVFDTPDDRLVWDVGHQAYPHKILTGRRERMSTLRQKDGVAAFPRRSESEYDTFGVGHS 130

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA LGMA+A  ++      + VI +G   AG A+EA+++A  +D+NM+VILND+  
Sbjct: 131 STSISAALGMAIAARLQHSDRKAIAVIGDGALTAGMAFEALNHAPEVDANMLVILNDNDM 190

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+          ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+
Sbjct: 191 SI--------SRNVGGLSNYLAKILSSRTYASMREGSKKVLSRL-PGAWEIARRTEEYAK 241

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---R 371
           GM+ P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +HVVT++ +    
Sbjct: 242 GMLVP--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDL--KGPQFLHVVTKKGKGFAP 297

Query: 372 AE-DTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
           AE D     AI K  E      + P       Y   F E L   A  D  +V +   M+ 
Sbjct: 298 AEVDPIGYHAITK-LEPVDAPAAAPKKAGGPKYSGVFGEWLCDMAAVDPRLVGITPAMKE 356

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L  F E+FPERYFDV +AEQHAVT +AG+AC G KP   I S FLQRAYDQ+V+DV 
Sbjct: 357 GSDLVAFSERFPERYFDVAIAEQHAVTLAAGMACEGAKPVVAIYSTFLQRAYDQLVHDVA 416

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q L V F I  AGLVG DGPT  G+FD++F+ C+P M+VM PSDE+EL  M++T   + 
Sbjct: 417 VQNLDVLFAIDRAGLVGEDGPTHAGSFDLSFLRCIPGMLVMTPSDENELRKMLST-GHLY 475

Query: 551 DRPVCFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
           + P   RYPRG    A +  DL      PIEIGKG V  +G  VALL +G  +   LK  
Sbjct: 476 NGPAAVRYPRGTGPNAPIAKDLE-----PIEIGKGVVRRQGNKVALLVFGVQLAEALKVA 530

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG 665
             L     D TV D RF KPLD  LVRE+  +H  L++VEE +I GG G  VS F+A + 
Sbjct: 531 EKL-----DATVVDMRFVKPLDEALVREIAGSHELLVSVEENAIMGGAGGAVSEFLAREN 585

Query: 666 LLDSGVKWRPIVLPDNYIEHASPTQQLALAGL 697
           +L S +    + LPD Y+EHA P Q LA  GL
Sbjct: 586 ILKSVLH---LGLPDTYVEHAKPAQMLAECGL 614


>gi|398901781|ref|ZP_10650572.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM50]
 gi|398179392|gb|EJM67004.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM50]
          Length = 632

 Score =  474 bits (1221), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 283/632 (44%), Positives = 376/632 (59%), Gaps = 38/632 (6%)

Query: 76  KEPT-PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           K PT P+LD    P  L+ L   EL+ LA E+R EL   V +T     + L  +ELT+AL
Sbjct: 11  KRPTTPLLDRANTPDGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIELTIAL 70

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H+VF  P D+++WDVG Q Y HKILTGRR  + TLR+KDG++ +  RSESEYD F  GH 
Sbjct: 71  HYVFDTPDDRLVWDVGHQAYPHKILTGRRERMGTLRQKDGVAAFPRRSESEYDTFGVGHS 130

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA LGMA+A  ++      + VI +G   AG A+EA+++A  +++NM+VILND+  
Sbjct: 131 STSISAALGMAIAARLQHSDRKAIAVIGDGALTAGMAFEALNHAPEVNANMLVILNDNDM 190

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+          ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+
Sbjct: 191 SI--------SRNVGGLSNYLAKILSSRTYASMREGSKKVLSRL-PGAWEIARRTEEYAK 241

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---R 371
           GM+ P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +HVVT++ +    
Sbjct: 242 GMLVP--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDL--KGPQFLHVVTKKGKGFAP 297

Query: 372 AE-DTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
           AE D     AI K  E      + P       Y   F E L   A  D  +V +   M+ 
Sbjct: 298 AEVDPIGYHAITK-LEPVDAPAAAPKKAGGPKYSGVFGEWLCDMAAVDPRLVGITPAMKE 356

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L  F E+FPERYFDV +AEQHAVT +AG+AC G KP   I S FLQRAYDQ+V+DV 
Sbjct: 357 GSDLVAFSERFPERYFDVAIAEQHAVTLAAGMACEGAKPVVAIYSTFLQRAYDQLVHDVA 416

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q L V F I  AGLVG DGPT  G+FD++F+ C+P M+VM PSDE+EL  M++T   + 
Sbjct: 417 VQNLDVLFAIDRAGLVGEDGPTHAGSFDLSFLRCIPGMLVMTPSDENELRKMLST-GHLY 475

Query: 551 DRPVCFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
           D P   RYPRG    A +  DL      PIEIGKG V  +G  VALL +G  +   LK  
Sbjct: 476 DGPAAVRYPRGTGPNAPIAKDLE-----PIEIGKGVVRRQGSKVALLVFGVQLAEALKVA 530

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG 665
             L     D TV D RF KPLD  LVRE+  +H  L+TVEE +I GG G  VS F+A + 
Sbjct: 531 EKL-----DATVVDMRFVKPLDEALVREIAGSHELLVTVEENAIMGGAGGAVSEFLAREN 585

Query: 666 LLDSGVKWRPIVLPDNYIEHASPTQQLALAGL 697
           +L S +    + LPD Y+EHA P Q LA  GL
Sbjct: 586 ILKSVLH---LGLPDAYVEHAKPAQMLAECGL 614


>gi|409422488|ref|ZP_11259583.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. HYS]
          Length = 632

 Score =  474 bits (1221), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 277/648 (42%), Positives = 385/648 (59%), Gaps = 46/648 (7%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD  + P  L+ L   +L+ LA E+R EL   V +T     + L  +ELT+ALH+VF
Sbjct: 15  TPLLDRADTPAGLRRLAEADLESLADELRQELLYTVGQTGGHFGAGLGVIELTIALHYVF 74

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR  +HTLR+KDG++ +  R+ESEYD F  GH   S+
Sbjct: 75  DTPDDRLVWDVGHQAYPHKILTGRRQRMHTLRQKDGLAAFPRRAESEYDTFGVGHSSTSI 134

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LGMA+A  ++      + VI +G   AG A+EA+++A  +D++M+VILND+  S+  
Sbjct: 135 SAALGMAIAARLQNDPRKSIAVIGDGALTAGMAFEALNHAQEVDADMLVILNDNDMSI-- 192

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                   ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+GM+ 
Sbjct: 193 ------SRNVGGLSNYLAKILSSRTYSSMREGSKKVLSRL-PGAWEIARRTEEYAKGMLV 245

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---RAE-D 374
           P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +HVVT++ +    AE D
Sbjct: 246 P--GTLFEELGWNYIGPIDGHDLPTLITTLRNMRDL--KGPQFLHVVTKKGKGFAPAEVD 301

Query: 375 TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
                AI K  E      + P       Y   F + L   A  D+ +V +   M+    L
Sbjct: 302 PIGYHAITK-LEPVDKPAAAPKKAGGPKYSAVFGQWLCDMAAADQRLVGITPAMKEGSDL 360

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F E++P+RYFDV +AEQHAVT +AG+AC G KP   I S FLQRAYDQ+++DV  Q L
Sbjct: 361 VAFSERYPDRYFDVAIAEQHAVTLAAGMACEGAKPVVAIYSTFLQRAYDQLIHDVAVQNL 420

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
            V F I  AGLVG DGPT  G+FD++F+ C+P M+VM PSDE+EL  M++T   + + P 
Sbjct: 421 DVLFAIDRAGLVGEDGPTHAGSFDLSFLRCIPGMLVMTPSDENELRKMLST-GHLYNGPA 479

Query: 555 CFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLS 610
             RYPRG    A +   L      P+EIGKG V  +G  VALL +G  +   LK      
Sbjct: 480 AVRYPRGSGPNAPIENSLE-----PLEIGKGIVRRQGSKVALLVFGVQLSEALKVAEQ-- 532

Query: 611 KLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDS 669
              ID TV D RF KPLD  LVRE+  +H  L+T+EE +I GG G+ VS F+A + +L  
Sbjct: 533 ---IDATVVDMRFVKPLDEALVREIAGSHDLLVTIEENAIMGGAGAAVSEFLAREAVL-- 587

Query: 670 GVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAATA---LSLLG 711
               +P++   LPD Y+EHA P Q LA  GL    I A+    + LLG
Sbjct: 588 ----KPMLHLGLPDVYVEHAKPAQMLAECGLDAAGIEASVRQRMQLLG 631


>gi|408479221|ref|ZP_11185440.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. R81]
          Length = 632

 Score =  474 bits (1219), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 285/653 (43%), Positives = 384/653 (58%), Gaps = 43/653 (6%)

Query: 76  KEP-TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           K P TP+LD    P  L+ L   EL+ LA E+R EL   V +T     + L  +ELT+AL
Sbjct: 11  KRPSTPLLDRAVTPAGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIELTIAL 70

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H+VF  P D+++WDVG Q Y HKILTGRR  + +LR+KDGI+ +  R+ESEYD F  GH 
Sbjct: 71  HYVFDTPDDRLVWDVGHQAYPHKILTGRRERMGSLRQKDGIAAFPRRAESEYDTFGVGHS 130

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA LGMA+A  ++G     + VI +G   AG A+EA+++A  +D+NM+VILND+  
Sbjct: 131 STSISAALGMAIAARLQGSDRKAIAVIGDGALTAGMAFEALNHAPEVDANMLVILNDNDM 190

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+          ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+
Sbjct: 191 SI--------SRNVGGLSNYLAKILSSRTYASMREGSKKVLSRL-PGAWEIARRTEEYAK 241

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---R 371
           GM+ P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +H+VT++ +    
Sbjct: 242 GMLVP--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDL--KGPQFLHIVTKKGKGFAP 297

Query: 372 AE-DTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
           AE D     AI K  E      + P       Y   F E L   A  D  +V +   M+ 
Sbjct: 298 AEVDPIGYHAITK-LEPVDAPAAAPKKASGPKYSGVFGEWLCDMAAADPRLVGITPAMKE 356

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L  F E+FP RYFDV +AEQHAVTF+AG+AC G KP   I S FLQR YDQ+V+DV 
Sbjct: 357 GSDLVAFSERFPLRYFDVAIAEQHAVTFAAGMACEGAKPVVAIYSTFLQRGYDQLVHDVA 416

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q L V F I  AGLVG DGPT  G+FD++++ C+P M+VM PSDE+EL  M++T   + 
Sbjct: 417 VQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDENELRKMLST-GHLY 475

Query: 551 DRPVCFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
           + P   RYPRG    A++  DL      PIEIGKG V  +G   A L +G  +   LK  
Sbjct: 476 NGPAAVRYPRGNGPNAVIEKDLE-----PIEIGKGIVRRQGSKTAFLVFGVQLAEALKVA 530

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG 665
                  ID TV D RF KPLD  LVRE+  +H  L+TVEE +I GG G+ VS F+A + 
Sbjct: 531 E-----KIDATVVDMRFVKPLDEALVREIAGSHELLVTVEENAIMGGAGAAVSEFLAREN 585

Query: 666 LLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALL 718
           +L S +    + LPD Y+EHA P Q LA  GL    I A+      R R ALL
Sbjct: 586 ILKSVLH---LGLPDVYVEHAKPAQMLAECGLDEAGIEASV-----RERMALL 630


>gi|440737921|ref|ZP_20917472.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fluorescens
           BRIP34879]
 gi|440381660|gb|ELQ18186.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fluorescens
           BRIP34879]
          Length = 632

 Score =  473 bits (1218), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 280/664 (42%), Positives = 382/664 (57%), Gaps = 72/664 (10%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD    P  L+ L   EL+ LA E+R EL   V +T     + L  +ELT+ALH+VF
Sbjct: 15  TPLLDRAATPDGLRRLAEAELETLADELRLELLYTVGQTGGHFGAGLGVIELTIALHYVF 74

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR  +++LR+KDGI+ +  R+ESEYD F  GH   S+
Sbjct: 75  DTPDDRLVWDVGHQAYPHKILTGRRERMNSLRQKDGIAAFPRRAESEYDTFGVGHSSTSI 134

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LGMA+A  ++G     + VI +G   AG A+EA+++A  +D+NM+VILND+  S+  
Sbjct: 135 SAALGMAIAARLQGSERKAIAVIGDGALTAGMAFEALNHAPEVDANMLVILNDNDMSI-- 192

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                   ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+GM+ 
Sbjct: 193 ------SRNVGGLSNYLAKILSSRTYASMREGSKKVLSRL-PGAWEIARRTEEYAKGMLV 245

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
           P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +H+VT            
Sbjct: 246 P--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDL--KGPQFLHIVT------------ 289

Query: 379 EAIEKQQEGASDSNSLPFGNYSRT-------------------YDDCFIEALVMEAEKDK 419
               K+ +G + +   P G ++ T                   Y   F E L   A  D 
Sbjct: 290 ----KKGKGFAPAEVDPIGYHAITKLDPLDAPAAAPKKASGPKYSGVFGEWLCDMAAADP 345

Query: 420 DIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQ 479
            +V V   M+    L  F E+FP RYFDV +AEQHAVTF+AG+AC G KP   I S FLQ
Sbjct: 346 RLVGVTPAMKEGSDLVAFSERFPLRYFDVAIAEQHAVTFAAGMACEGAKPVVAIYSTFLQ 405

Query: 480 RAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDEL 539
           R YDQ+V+DV  Q L V F I  AGLVG DGPT  G+FD++++ C+P M+VM PSDE+EL
Sbjct: 406 RGYDQLVHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDENEL 465

Query: 540 VDMVATVASIDDRPVCFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGY 595
             M++T   + + P   RYPRG    A++  DL      PIEIGKG V  +G +VA L +
Sbjct: 466 RKMLST-GHLYNGPAAVRYPRGTGPNAVIEKDLE-----PIEIGKGIVRRQGSNVAFLVF 519

Query: 596 GAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFG 654
           G  +   LK         ID TV D RF KPLD  LVRE+  +H  L+TVEE +I  G G
Sbjct: 520 GVQLAEALKVAE-----KIDATVVDMRFVKPLDEALVREIAGSHELLVTVEENAIMAGAG 574

Query: 655 SHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTR 714
           + VS F+A + +L S +    + LPD Y+EHA P Q LA  GL    I  +      R R
Sbjct: 575 AAVSEFLARENILKSVLH---LGLPDVYVEHAKPAQMLAECGLDEAGIETSV-----RAR 626

Query: 715 EALL 718
            ALL
Sbjct: 627 MALL 630


>gi|387895862|ref|YP_006326159.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fluorescens
           A506]
 gi|387164060|gb|AFJ59259.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fluorescens
           A506]
          Length = 632

 Score =  473 bits (1217), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 285/653 (43%), Positives = 384/653 (58%), Gaps = 43/653 (6%)

Query: 76  KEP-TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           K P TP+LD    P  L+ L   EL+ LA E+R EL   V +T     + L  +ELT+AL
Sbjct: 11  KRPSTPLLDRAATPDGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIELTIAL 70

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H+VF  P D+++WDVG Q Y HKILTGRR  + +LR+KDG++ +  R+ESEYD F  GH 
Sbjct: 71  HYVFDTPDDRLVWDVGHQAYPHKILTGRRERMASLRQKDGLAAFPRRAESEYDTFGVGHS 130

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA LGMA+A  ++G     + VI +G   AG A+EA+++A  +D+NM+VILND+  
Sbjct: 131 STSISAALGMAIAARLQGSERKAIAVIGDGALTAGMAFEALNHAPEVDANMLVILNDNDM 190

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+          ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+
Sbjct: 191 SI--------SRNVGGLSNYLAKILSSRTYASMREGSKKVLSRL-PGAWEIARRTEEYAK 241

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---R 371
           GM+ P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +H+VT++ +    
Sbjct: 242 GMLVP--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDL--KGPQFLHIVTKKGKGFAP 297

Query: 372 AE-DTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
           AE D     AI K  E      + P       Y   F E L   A  D  +V V   M+ 
Sbjct: 298 AEVDPIGYHAITK-LEPLDAPAAAPKKASGPKYSGVFGEWLCDMAAADPRLVGVTPAMKE 356

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L  F E+FP RYFDV +AEQHAVTF+AG+AC G KP   I S FLQR YDQ+V+DV 
Sbjct: 357 GSDLVAFSERFPLRYFDVAIAEQHAVTFAAGMACEGAKPVVAIYSTFLQRGYDQLVHDVA 416

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q L V F I  AGLVG DGPT  G+FD++++ C+P M+VM PSDE+EL  M++T   + 
Sbjct: 417 VQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDENELRKMLST-GHLY 475

Query: 551 DRPVCFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
           + P   RYPRG    A++  DL      PIEIGKG V  +G   A L +G  +   LK  
Sbjct: 476 NGPAAVRYPRGTGPNAVIEKDLE-----PIEIGKGIVRRQGSKTAFLVFGVQLAEALKVA 530

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG 665
                  ID TV D RF KPLD  LVRE+  +H  L+TVEE +I GG G+ VS F+A + 
Sbjct: 531 E-----KIDATVVDMRFVKPLDEALVREIAASHELLVTVEENAIMGGAGAAVSEFLAREN 585

Query: 666 LLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALL 718
           +L S +    + LPD Y+EHA P Q LA  GL    I A+      R R ALL
Sbjct: 586 ILKSVLH---LGLPDVYVEHAKPAQMLAECGLDEAGIEASV-----RERLALL 630


>gi|423693798|ref|ZP_17668318.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fluorescens
           SS101]
 gi|388001385|gb|EIK62714.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fluorescens
           SS101]
          Length = 632

 Score =  473 bits (1217), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 285/653 (43%), Positives = 383/653 (58%), Gaps = 43/653 (6%)

Query: 76  KEP-TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           K P TP+LD    P  L+ L   EL+ LA E+R EL   V +T     + L  +ELT+AL
Sbjct: 11  KRPSTPLLDRAATPDGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIELTIAL 70

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H+VF  P D+++WDVG Q Y HKILTGRR  + +LR+KDG++ +  R+ESEYD F  GH 
Sbjct: 71  HYVFDTPDDRLVWDVGHQAYPHKILTGRRERMASLRQKDGLAAFPRRAESEYDTFGVGHS 130

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA LGMA+A  ++G     + VI +G   AG A+EA+++A  +D+NM+VILND+  
Sbjct: 131 STSISAALGMAIAARLQGSERKAIAVIGDGALTAGMAFEALNHAPEVDANMLVILNDNDM 190

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+          ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+
Sbjct: 191 SI--------SRNVGGLSNYLAKILSSRTYASMREGSKKVLSRL-PGAWEIARRTEEYAK 241

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---R 371
           GM+ P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +H+VT++ +    
Sbjct: 242 GMLVP--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDL--KGPQFLHIVTKKGKGFAP 297

Query: 372 AE-DTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
           AE D     AI K  E      + P       Y   F E L   A  D  +V V   M+ 
Sbjct: 298 AEVDPIGYHAITK-LEPLDAPAAAPKKASGPKYSGVFGEWLCDMAAADPRLVGVTPAMKE 356

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L  F E+FP RYFDV +AEQHAVTF+AG+AC G KP   I S FLQR YDQ+V+DV 
Sbjct: 357 GSDLVAFSERFPLRYFDVAIAEQHAVTFAAGMACEGAKPVVAIYSTFLQRGYDQLVHDVA 416

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q L V F I  AGLVG DGPT  G+FD++++ C+P M+VM PSDE+EL  M++T   + 
Sbjct: 417 VQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDENELRKMLST-GHLY 475

Query: 551 DRPVCFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
           + P   RYPRG    A++  DL      PIEIGKG V  +G   A L +G  +   LK  
Sbjct: 476 NGPAAVRYPRGTGPNAVIEKDLE-----PIEIGKGIVRRQGSKTAFLVFGVQLAEALKVA 530

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG 665
                  ID TV D RF KPLD  LVRE+   H  L+TVEE +I GG G+ VS F+A + 
Sbjct: 531 E-----KIDATVVDMRFVKPLDEALVREIAAGHELLVTVEENAIMGGAGAAVSEFLAREN 585

Query: 666 LLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALL 718
           +L S +    + LPD Y+EHA P Q LA  GL    I A+      R R ALL
Sbjct: 586 ILKSVLH---LGLPDVYVEHAKPAQMLAECGLDEAGIEASV-----RERLALL 630


>gi|398879894|ref|ZP_10634975.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM67]
 gi|398195212|gb|EJM82263.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM67]
          Length = 632

 Score =  473 bits (1217), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 282/640 (44%), Positives = 378/640 (59%), Gaps = 38/640 (5%)

Query: 76  KEPT-PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           K PT P+LD    P  L+ L   EL+ LA E+R EL   V +T     + L  +ELT+AL
Sbjct: 11  KRPTTPLLDRANTPDGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIELTIAL 70

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H+VF  P D+++WDVG Q Y HKILTGRR  + TLR+KDG++ +  RSESEYD F  GH 
Sbjct: 71  HYVFDTPDDRLVWDVGHQAYPHKILTGRRERMGTLRQKDGVAAFPRRSESEYDTFGVGHS 130

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA LGMA+A  ++      + VI +G   AG A+EA+++A  +D+NM+VILND+  
Sbjct: 131 STSISAALGMAIAARLQNSDRKAIAVIGDGALTAGMAFEALNHAPEVDANMLVILNDNDM 190

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+          ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+
Sbjct: 191 SI--------SRNVGGLSNYLAKILSSRTYASMREGSKKVLSRL-PGAWEIARRTEEYAK 241

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---R 371
           GM+ P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +H+VT++ +    
Sbjct: 242 GMLVP--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDL--KGPQFLHIVTKKGKGFAP 297

Query: 372 AE-DTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
           AE D     AI K  E      + P       Y   F E L   A  D  +V +   M+ 
Sbjct: 298 AEVDPIGYHAITK-LEPLDAPAAAPKKASGPKYSGVFGEWLCDMAATDPRLVGITPAMKE 356

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L  F E+FP RYFDV +AEQHAVTF+AG+AC G KP   I S FLQR YDQ+V+DV 
Sbjct: 357 GSDLVAFSERFPLRYFDVAIAEQHAVTFAAGMACEGAKPVVAIYSTFLQRGYDQLVHDVA 416

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q L V F I  AGLVG DGPT  G+FD++F+ C+P M+VM PSDE+EL  M+ T   + 
Sbjct: 417 VQNLDVLFAIDRAGLVGEDGPTHAGSFDLSFLRCIPGMLVMTPSDENELRKML-TTGHLY 475

Query: 551 DRPVCFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
           + P   RYPRG    A +  DL      PIEIGKG V  +G  VALL +G  +   LK  
Sbjct: 476 NGPAAVRYPRGNGPNATIEKDLQ-----PIEIGKGVVRRQGSKVALLVFGVQLAEALKVA 530

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG 665
             L     D TV D RF KPLD +LVRE+  +H  L+T+EE +I GG G  VS F+A + 
Sbjct: 531 ETL-----DATVVDMRFVKPLDEELVREIAGSHELLVTIEENAIMGGAGGAVSEFLAREN 585

Query: 666 LLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAAT 705
           +L S +    + LPD Y+EHA P Q LA  GL    I A+
Sbjct: 586 ILKSVLH---LGLPDLYVEHAKPAQMLAECGLDEAGIEAS 622


>gi|407368404|ref|ZP_11114936.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas mandelii JR-1]
          Length = 632

 Score =  473 bits (1217), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 279/640 (43%), Positives = 378/640 (59%), Gaps = 38/640 (5%)

Query: 76  KEPT-PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           K PT P+LD    P  L+ L   EL+ LA E+R EL   V +T     + L  +ELT+AL
Sbjct: 11  KRPTTPLLDRANTPDGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIELTIAL 70

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H+VF  P D+++WDVG Q Y HKILTGRR  + TLR+KDG++ +  RSESEYD F  GH 
Sbjct: 71  HYVFDTPDDRLVWDVGHQAYPHKILTGRRERMGTLRQKDGVAAFPRRSESEYDTFGVGHS 130

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA LGMA+A  ++      + VI +G   AG A+EA+++A  +++NM+VILND+  
Sbjct: 131 STSISAALGMAIAARLQNSDRKAIAVIGDGALTAGMAFEALNHAPEVNANMLVILNDNDM 190

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+          ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+
Sbjct: 191 SI--------SRNVGGLSNYLAKILSSRTYASMREGSKKVLSRL-PGAWEIARRTEEYAK 241

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---R 371
           GM+ P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +HVVT++ +    
Sbjct: 242 GMLVP--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDL--KGPQFLHVVTKKGKGFAP 297

Query: 372 AE-DTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
           AE D     AI K  E      + P  +    Y   F E L   A  D  +V +   M+ 
Sbjct: 298 AEIDPIGYHAITK-LEPVDAPAAAPKKSGGPKYSGVFGEWLCDMAASDPRLVGITPAMKE 356

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L  F E+FP RYFDV +AEQHAVT +AG+AC G KP   I S FLQR YDQ+++DV 
Sbjct: 357 GSDLVAFSERFPLRYFDVAIAEQHAVTLAAGMACEGAKPVVAIYSTFLQRGYDQLIHDVA 416

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q L V F I  AGLVG DGPT  G+FD++F+ C+P M+VM PSDE+EL  M+ T   + 
Sbjct: 417 VQNLDVLFAIDRAGLVGEDGPTHAGSFDLSFLRCIPGMLVMTPSDENELRKML-TTGHLF 475

Query: 551 DRPVCFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
           + P   RYPRG    A +  DL      PIEIGKG V  +G  VALL +G  +   LK  
Sbjct: 476 NGPAAVRYPRGTGPNATIEKDLQ-----PIEIGKGVVRRQGSKVALLVFGVQLAEALKVA 530

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG 665
             L     D TV D RF KPLD  LVR++  +H  L+T+EE +I GG G  VS F+A + 
Sbjct: 531 ETL-----DATVVDMRFVKPLDEDLVRDIAGSHELLVTIEENAIMGGAGGAVSEFLAREN 585

Query: 666 LLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAAT 705
           +L S +    + LPD+Y+EHA P Q LA  GL    I A+
Sbjct: 586 ILKSMLH---LGLPDSYVEHAKPAQMLAECGLDEAGIEAS 622


>gi|229592838|ref|YP_002874957.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fluorescens
           SBW25]
 gi|259645387|sp|C3K2R1.1|DXS_PSEFS RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|229364704|emb|CAY52664.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fluorescens
           SBW25]
          Length = 632

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 280/640 (43%), Positives = 380/640 (59%), Gaps = 38/640 (5%)

Query: 76  KEP-TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           K P TP+LD    P+ L+ L   EL+ LA E+R EL   V +T     + L  +ELT+AL
Sbjct: 11  KRPSTPLLDRAVTPVGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIELTIAL 70

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H+VF  P D+++WDVG Q Y HKILTGRR  + TLR+KDGI+ +  R+ESEYD F  GH 
Sbjct: 71  HYVFDTPDDRLVWDVGHQAYPHKILTGRREQMGTLRQKDGIAAFPRRAESEYDTFGVGHS 130

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA LGMA+A  ++G     + VI +G   AG A+EA+++A  +D+NM+VILND+  
Sbjct: 131 STSISAALGMAIAARLQGSDRKAIAVIGDGALTAGMAFEALNHAPEVDANMLVILNDNDM 190

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+          ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+
Sbjct: 191 SI--------SRNVGGLSNYLAKILSSRTYASMREGSKKVLSRL-PGAWEIARRTEEYAK 241

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---R 371
           GM+ P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +H+VT++ +    
Sbjct: 242 GMLVP--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDL--KGPQFLHIVTKKGKGFAP 297

Query: 372 AE-DTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
           AE D     AI K  +  +   + P       Y   F E L   A  D  +V +   M+ 
Sbjct: 298 AEVDPIGYHAITK-LDPLNAPAAAPKKASGPKYSGVFGEWLCDMAAADPRLVGITPAMKE 356

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L  F E+FP RYFDV +AEQHAVTF+AG+AC G KP   I S FLQR YDQ+V+DV 
Sbjct: 357 GSDLVAFSERFPLRYFDVAIAEQHAVTFAAGMACEGAKPVVAIYSTFLQRGYDQLVHDVA 416

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q L V F I  AGLVG DGPT  G+FD++++ C+P M+VM PSDE+EL  M++T   + 
Sbjct: 417 VQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDENELRKMLST-GHLY 475

Query: 551 DRPVCFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
           + P   RYPRG    A++  DL      PIEIGKG V  +G   A L +G  +   LK  
Sbjct: 476 NGPAAVRYPRGNGPNAVIEKDLE-----PIEIGKGIVRRQGSKTAFLVFGVQLAEALKVA 530

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG 665
                  ID TV D RF KPLD  LVRE+   H  L+TVEE +I GG G+ VS F+A + 
Sbjct: 531 E-----KIDATVVDMRFVKPLDEALVREIAGGHELLVTVEENAIMGGAGAAVSEFLAREN 585

Query: 666 LLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAAT 705
           +L S +    + LPD Y+EHA P Q LA  GL    I A+
Sbjct: 586 ILKSVLH---LGLPDVYVEHAKPAQMLAECGLDEAGIEAS 622


>gi|71735584|ref|YP_272899.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|118595603|sp|Q48NX0.1|DXS_PSE14 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|71556137|gb|AAZ35348.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           phaseolicola 1448A]
          Length = 630

 Score =  472 bits (1215), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 277/645 (42%), Positives = 386/645 (59%), Gaps = 41/645 (6%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD  + P  L+ L   EL+ LA E+R EL   V +T     + L  +ELT+ALH+VF
Sbjct: 15  TPLLDRADTPHGLRRLGEAELETLADELRLELLYSVGQTGGHFGAGLGVIELTIALHYVF 74

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR+ + TLR+KDG++ +  RSESEYD F  GH   S+
Sbjct: 75  DTPDDRLVWDVGHQAYPHKILTGRRARMSTLRQKDGVAAFPRRSESEYDTFGVGHSSTSI 134

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LGMA+A  ++G     + VI +G   AG A+EA+++A  + +NM+VILND+  S+  
Sbjct: 135 SAALGMAIASRLQGSERKSIAVIGDGALTAGMAFEALNHAPEVAANMLVILNDNDMSI-- 192

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                   ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+GM+ 
Sbjct: 193 ------SRNVGGLSNYLAKILSSRTYSSMREGSKKVLSRL-PGAWEIARRTEEYAKGMLV 245

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---RAE-D 374
           P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +HVVT++ +    AE D
Sbjct: 246 P--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDL--KGPQFLHVVTKKGKGFAPAEVD 301

Query: 375 TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
                AI K +    ++ + P    +  Y   F + +   AE D  +V +   M+    L
Sbjct: 302 PIGYHAITKLE--PLNAPAAPKKISAPKYSAVFGQWICDMAEADSRLVGITPAMKEGSDL 359

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F E+FPERYFDV +AEQHAVT +AG+AC G KP   I S FLQR YDQ+V+DV  Q L
Sbjct: 360 VAFSERFPERYFDVAIAEQHAVTLAAGMACEGSKPVVAIYSTFLQRGYDQLVHDVAVQNL 419

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
            V F I  AGLVG DGPT  G+FD++++ C+P M+VM PSDE+EL  ++ T   +   P 
Sbjct: 420 DVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMVVMTPSDENELRKLLNT-GYLHTGPA 478

Query: 555 CFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLS 610
             RYPRG    A++ T L      P+EIGKG V  +G+ VA+L +G  +     A AL+ 
Sbjct: 479 AVRYPRGTGPDALIETGLD-----PVEIGKGVVRRQGQGVAILVFGVQL-----ADALVV 528

Query: 611 KLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDS 669
              +D TV D RF KPLD  LV E   NH  L+T+EE ++ GG G+ VS F+A   +L S
Sbjct: 529 AEKLDATVIDMRFVKPLDEALVSEAAANHELLVTLEENAVMGGAGAAVSEFLARANILKS 588

Query: 670 GVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAAT---ALSLLG 711
            +    + LPD Y+EHA P Q LA  GL    I A     L+L+G
Sbjct: 589 VLH---LGLPDTYVEHAKPAQMLAECGLDAQGIEAAINERLALIG 630


>gi|312963292|ref|ZP_07777775.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fluorescens
           WH6]
 gi|311282372|gb|EFQ60970.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fluorescens
           WH6]
          Length = 632

 Score =  472 bits (1215), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 284/653 (43%), Positives = 385/653 (58%), Gaps = 43/653 (6%)

Query: 76  KEP-TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           K P TP+LD    P  L+ L   EL+ LA E+R EL   V +T     + L  +ELT+AL
Sbjct: 11  KRPSTPLLDRAATPDGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIELTIAL 70

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H+VF  P D+++WDVG Q Y HKILTGRR  + TLR+KDG++ +  RSESEYD F  GH 
Sbjct: 71  HYVFDTPDDRLVWDVGHQAYPHKILTGRRERMSTLRQKDGVAAFPRRSESEYDTFGVGHS 130

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA LGMA+A  ++      + VI +G   AG A+EA+++A  +++NM+VILND+  
Sbjct: 131 STSISAALGMAIAARLQNSDRKAIAVIGDGALTAGMAFEALNHAPEVEANMLVILNDNDM 190

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+          ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+
Sbjct: 191 SI--------SRNVGGLSNYLAKILSSRTYASMREGSKKVLSRL-PGAWEIARRTEEYAK 241

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---R 371
           GM+ P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +H+VT++ +    
Sbjct: 242 GMLVP--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDL--KGPQFLHIVTKKGKGFAP 297

Query: 372 AE-DTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
           AE D     AI K  E      + P       Y   F E L   A  D  +V +   M+ 
Sbjct: 298 AEVDPIGYHAITK-LEPLDAPAAAPKKASGPKYSGVFGEWLCDMAAADPRLVGITPAMKE 356

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L  F E+FP RYFDV +AEQHAVTF+AG+AC G KP   I S FLQR YDQ+V+DV 
Sbjct: 357 GSDLVAFSERFPLRYFDVAIAEQHAVTFAAGMACEGAKPVVAIYSTFLQRGYDQLVHDVA 416

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q L V F I  AGLVG DGPT  G+FD++++ C+P M+VM PSDE+EL  M++T   + 
Sbjct: 417 VQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDENELRKMLST-GHLY 475

Query: 551 DRPVCFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
           + P   RYPRG    A++  DL      PIEIGKG V  +G +VA L +G  +   LK  
Sbjct: 476 NGPAAVRYPRGNGPNAVIEKDLE-----PIEIGKGIVRRQGSNVAFLVFGVQLAEALKVA 530

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG 665
                  ID TV D RF KPLD  LVRE+  +H  L+TVEE +I GG G+ VS F+A + 
Sbjct: 531 E-----KIDATVIDMRFVKPLDEALVREIAGSHALLVTVEENAIMGGAGAAVSEFLAREN 585

Query: 666 LLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALL 718
           +L S +    + LPD Y+EHA P Q L+  GL    I A+      R R ALL
Sbjct: 586 ILKSVLH---LGLPDVYVEHAKPVQMLSECGLDEAGIEASV-----RQRMALL 630


>gi|398910222|ref|ZP_10654918.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM49]
 gi|398186484|gb|EJM73858.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM49]
          Length = 632

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 283/640 (44%), Positives = 376/640 (58%), Gaps = 38/640 (5%)

Query: 76  KEPT-PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           K PT P+LD    P  L+ L   EL+ LA E+R EL   V +T     + L  +ELT+AL
Sbjct: 11  KRPTTPLLDRANTPDGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIELTIAL 70

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H+VF  P D+++WDVG Q Y HKILTGRR  + TLR+KDG++ +  RSESEYD F  GH 
Sbjct: 71  HYVFDTPDDRLVWDVGHQAYPHKILTGRRERMGTLRQKDGVAAFPRRSESEYDTFGVGHS 130

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA LGMA+A  ++      + VI +G   AG A+EA+++A  +D+NM+VILND+  
Sbjct: 131 STSISAALGMAIAARLQNSERKAIAVIGDGALTAGMAFEALNHAPEVDANMLVILNDNDM 190

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+          ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+
Sbjct: 191 SI--------SRNVGGLSNYLAKILSSRTYASMREGSKKVLSRL-PGAWEIARRTEEYAK 241

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---R 371
           GM+ P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +HVVT++ +    
Sbjct: 242 GMLVP--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDL--KGPQFLHVVTKKGKGFAP 297

Query: 372 AE-DTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
           AE D     AI K  E      + P       Y   F E L   A  D  +V +   M+ 
Sbjct: 298 AEVDPIGYHAITK-LEPLDAPAAAPKKASGPKYSGVFGEWLCDMAAADPRLVGITPAMKE 356

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L  F E+FP RYFDV +AEQHAVT +AG+AC G KP   I S FLQR YDQ+V+DV 
Sbjct: 357 GSDLVAFSERFPLRYFDVAIAEQHAVTLAAGMACEGAKPVVAIYSTFLQRGYDQLVHDVA 416

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q L V F I  AGLVG DGPT  G+FD++F+ C+P M+VM PSDE+EL  M+ T   + 
Sbjct: 417 VQNLDVLFAIDRAGLVGEDGPTHAGSFDLSFLRCIPGMLVMTPSDENELRKML-TTGHLY 475

Query: 551 DRPVCFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
           + P   RYPRG    A +  DL      PIEIGKG V  +G  VALL +G  +   LK  
Sbjct: 476 EGPAAVRYPRGNGPNATIEKDLE-----PIEIGKGVVRRQGSKVALLVFGVQLAEALKVA 530

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG 665
             L     D TV D RF KPLD  LVRE+  +H  L+TVEE +I GG G  VS F+A + 
Sbjct: 531 ETL-----DATVVDMRFVKPLDEALVREIAGSHELLVTVEENAIMGGAGGAVSEFLAREN 585

Query: 666 LLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAAT 705
           +L S +    + LPD Y+EHA P Q LA  GL    I A+
Sbjct: 586 ILKSMLH---LGLPDIYVEHAKPAQMLAECGLDEAGIEAS 622


>gi|424925134|ref|ZP_18348495.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fluorescens
           R124]
 gi|404306294|gb|EJZ60256.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fluorescens
           R124]
          Length = 632

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 284/653 (43%), Positives = 382/653 (58%), Gaps = 43/653 (6%)

Query: 76  KEPT-PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           K PT P+LD    P  L+ L   EL+ LA E+R EL   V +T     + L  +ELT+AL
Sbjct: 11  KRPTTPLLDRANTPDGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIELTIAL 70

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H+VF  P D+++WDVG Q Y HKILTGRR  + TLR+KDGI+ +  R+ESEYD F  GH 
Sbjct: 71  HYVFDTPDDRLVWDVGHQAYPHKILTGRRQRMETLRQKDGIAAFPRRAESEYDTFGVGHS 130

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA LGMA+A  ++      + VI +G   AG A+EA+++A  +++NM+VILND+  
Sbjct: 131 STSISAALGMAIAARLQNSDRKAIAVIGDGALTAGMAFEALNHAPEVNANMLVILNDNDM 190

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+          ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+
Sbjct: 191 SI--------SRNVGGLSNYLAKILSSRTYASMREGSKKVLSRL-PGAWEIARRTEEYAK 241

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---R 371
           GM+ P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +H+VT++ +    
Sbjct: 242 GMLVP--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDL--KGPQFLHIVTKKGKGFAP 297

Query: 372 AE-DTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
           AE D     AI K  E      + P       Y   F E L   A  D  +V +   M+ 
Sbjct: 298 AEVDPIGYHAITK-LEPLDAPAAAPKKAGGPKYSAVFGEWLCDMAAADPRLVGITPAMKE 356

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L  F E+FP RYFDV +AEQHAVTF+AG+AC G KP   I S FLQR YDQ+V+DV 
Sbjct: 357 GSDLVAFSERFPLRYFDVAIAEQHAVTFAAGMACEGAKPVVAIYSTFLQRGYDQLVHDVA 416

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q L V F I  AGLVG DGPT  G+FD++++ C+P M++M PSDE+EL  M+ T   + 
Sbjct: 417 VQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMVIMTPSDENELRKML-TTGHLY 475

Query: 551 DRPVCFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
           + P   RYPRG    A +  DL      PIEIGKG V  +G  VALL +G  +   LK  
Sbjct: 476 NGPAAVRYPRGTGPNATIDKDLE-----PIEIGKGIVRRQGSKVALLVFGVQLSEALKVA 530

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG 665
             L     D TV D RF KPLD  LVRE+  NH  L+T+EE ++ GG G  VS F+A + 
Sbjct: 531 EKL-----DATVVDMRFVKPLDEALVREIAGNHELLVTIEENAVMGGAGGAVSEFLAREN 585

Query: 666 LLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALL 718
           +L S +    + LPD Y+EHA P Q LA  GL    I A+      R R ALL
Sbjct: 586 ILKSMLH---LGLPDIYVEHAKPAQMLAECGLDEAGIEASI-----RERLALL 630


>gi|389681780|ref|ZP_10173124.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas chlororaphis
           O6]
 gi|388554315|gb|EIM17564.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas chlororaphis
           O6]
          Length = 632

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 287/652 (44%), Positives = 383/652 (58%), Gaps = 47/652 (7%)

Query: 76  KEPT-PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           K PT P+LD    P  L+ L   EL+ LA E+R EL   V +T     + L  +ELT+AL
Sbjct: 11  KRPTTPLLDRANTPDGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIELTIAL 70

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H+VF  P D+++WDVG Q Y HKILTGRR  + +LR+KDG++ +  RSESEYD F  GH 
Sbjct: 71  HYVFDTPDDRLVWDVGHQAYPHKILTGRRERMASLRQKDGLAAFPRRSESEYDTFGVGHS 130

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA LGMA+A  ++      + VI +G   AG A+EA+++A  +D+NM+VILND+  
Sbjct: 131 STSISAALGMAIAARLQNSERKAIAVIGDGALTAGMAFEALNHAPEVDANMLVILNDNDM 190

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+          ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+
Sbjct: 191 SI--------SRNVGGLSNYLAKILSSRTYASMREGSKKVLSRL-PGAWEIARRTEEYAK 241

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---R 371
           GM+ P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +HVVT++ +    
Sbjct: 242 GMLVP--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDL--KGPQFLHVVTKKGKGFAP 297

Query: 372 AE-DTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
           AE D     AI K     S + + P       Y   F E L   A  D  +V +   M+ 
Sbjct: 298 AEVDPIGYHAITKLDPLDSPAAA-PKKAGGPKYSGVFGEWLCDMAAADPRLVGITPAMKE 356

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L  F E+FP RYFDV +AEQHAVT +AG+AC G KP   I S FLQR YDQ+V+DV 
Sbjct: 357 GSDLVAFSERFPLRYFDVAIAEQHAVTLAAGMACEGAKPVVAIYSTFLQRGYDQLVHDVA 416

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q L V F I  AGLVG DGPT  G+FD++F+ C+P M+VM PSDE+EL  M++T   + 
Sbjct: 417 VQNLDVLFAIDRAGLVGEDGPTHAGSFDLSFLRCIPGMVVMTPSDENELRKMLST-GHLY 475

Query: 551 DRPVCFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
           + P   RYPRG      +  DL      PIEIGKG V  +G  VALL +G  +   LK  
Sbjct: 476 NGPAAVRYPRGTGPNTTIEKDLQ-----PIEIGKGVVRRQGSKVALLVFGVQLAEALK-- 528

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG 665
            +  KL  D TV D RF KPLD  LVRE+  +H  L+TVEE +I GG G  VS F+A + 
Sbjct: 529 -VADKL--DATVVDMRFVKPLDEALVREIAASHELLVTVEENAIMGGAGGAVSEFLAREA 585

Query: 666 LLDSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAATA---LSLLG 711
           +L      +PI+   LPD Y+EHA P Q LA  GL    I A     L LLG
Sbjct: 586 IL------KPILHLGLPDLYVEHAKPAQMLAECGLDEAGIEAAVRERLRLLG 631


>gi|398948107|ref|ZP_10672587.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM33]
 gi|398161115|gb|EJM49358.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM33]
          Length = 632

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 287/650 (44%), Positives = 380/650 (58%), Gaps = 41/650 (6%)

Query: 76  KEPT-PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           K PT P+LD    P  L+ L   EL+ LA E+R EL   V +T     + L  +ELT+AL
Sbjct: 11  KRPTTPLLDRANTPDGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIELTIAL 70

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H+VF  P D+++WDVG Q Y HKILTGRR  + TLR+KDG++ +  RSESEYD F  GH 
Sbjct: 71  HYVFDTPDDRLVWDVGHQAYPHKILTGRRERMGTLRQKDGVAAFPRRSESEYDTFGVGHS 130

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA LGMA+A  ++      + VI +G   AG A+EA+++A  +D+NM+VILND+  
Sbjct: 131 STSISAALGMAIAARLQNSERKAIAVIGDGALTAGMAFEALNHAPEVDANMLVILNDNDM 190

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+          ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+
Sbjct: 191 SI--------SRNVGGLSNYLAKILSSRTYASMREGSKKVLSRL-PGAWEIARRTEEYAK 241

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---R 371
           GM+ P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +HVVT++ +    
Sbjct: 242 GMLVP--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDL--KGPQFLHVVTKKGKGFAP 297

Query: 372 AE-DTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
           AE D     AI K  E      + P       Y   F E L   A  D  +V +   M+ 
Sbjct: 298 AEVDPIGYHAITK-LEPLDAPAAAPKKASGPKYSGVFGEWLCDMAAADPRLVGITPAMKE 356

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L  F E+FP RYFDV +AEQHAVT +AG+AC G KP   I S FLQR YDQ+V+DV 
Sbjct: 357 GSDLVAFSERFPLRYFDVAIAEQHAVTLAAGMACEGAKPVVAIYSTFLQRGYDQLVHDVA 416

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q L V F I  AGLVG DGPT  G+FD++F+ C+P M+VM PSDE+EL  M+ T   + 
Sbjct: 417 VQNLDVLFAIDRAGLVGEDGPTHAGSFDLSFLRCIPGMLVMTPSDENELRKML-TTGHLY 475

Query: 551 DRPVCFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
           + P   RYPRG    A +  DL      PIEIGKG V  +G  VALL +G  +   LK  
Sbjct: 476 EGPAAVRYPRGNGPNATIEKDLE-----PIEIGKGIVRRQGSKVALLVFGVQLAEALKVA 530

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG 665
             L     D TV D RF KPLD  LVRE+  +H  L+TVEE +I GG G  VS F+A + 
Sbjct: 531 ETL-----DATVVDMRFVKPLDEALVREIAGSHELLVTVEENAIMGGAGGAVSEFLAREN 585

Query: 666 LLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAAT---ALSLLGR 712
           +L S +    + LPD Y+EHA P Q LA  GL    I A+    L LL R
Sbjct: 586 ILKSMLH---LGLPDIYVEHAKPAQMLAECGLDEAGIEASIRERLQLLNR 632


>gi|77461228|ref|YP_350735.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fluorescens
           Pf0-1]
 gi|119368202|sp|Q3K660.1|DXS_PSEPF RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|77385231|gb|ABA76744.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fluorescens
           Pf0-1]
          Length = 632

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 284/650 (43%), Positives = 379/650 (58%), Gaps = 41/650 (6%)

Query: 76  KEPT-PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           K PT P+LD    P  L+ L   EL+ LA E+R EL   V +T     + L  +ELT+AL
Sbjct: 11  KRPTTPLLDRANTPDGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIELTIAL 70

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H+VF  P D+++WDVG Q Y HKILTGRR  + TLR+KDGI+ +  RSESEYD F  GH 
Sbjct: 71  HYVFDTPDDRLVWDVGHQAYPHKILTGRRERMETLRQKDGIAAFPRRSESEYDTFGVGHS 130

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA LGMA+A  ++      + VI +G   AG A+EA+++A  +D+NM+VILND+  
Sbjct: 131 STSISAALGMAIAARLQNSDRKAIAVIGDGALTAGMAFEALNHAPEVDANMLVILNDNDM 190

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+          ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+
Sbjct: 191 SI--------SRNVGGLSNYLAKILSSRTYASMREGSKKVLSRL-PGAWEIARRTEEYAK 241

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---R 371
           GM+ P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +H+VT++ +    
Sbjct: 242 GMLVP--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDL--KGPQFLHIVTKKGKGFAP 297

Query: 372 AE-DTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
           AE D     AI K  E      + P       Y   F E L   A  D  +V +   M+ 
Sbjct: 298 AEVDPIGYHAITK-LEPLDAPAAAPKKAGGPKYSGVFGEWLCDMAAADPRLVGITPAMKE 356

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L  F E+FP RYFDV +AEQHAVT +AG+AC G KP   I S FLQR YDQ+V+DV 
Sbjct: 357 GSDLVAFSERFPLRYFDVAIAEQHAVTLAAGMACEGAKPVVAIYSTFLQRGYDQLVHDVA 416

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q L V F I  AGLVG DGPT  G+FD++F+ C+P M++M PSDE+EL  M+ T   + 
Sbjct: 417 VQNLDVLFAIDRAGLVGEDGPTHAGSFDLSFLRCIPGMVIMTPSDENELRKML-TTGHLY 475

Query: 551 DRPVCFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
           + P   RYPRG    A +  DL      PIEIGKG V  +G  VALL +G  +   LK  
Sbjct: 476 NGPAAVRYPRGTGPNATIEKDLE-----PIEIGKGVVRRQGSKVALLVFGVQMAEALKVA 530

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG 665
             L     D TV D RF KP+D  LVRE+  +H  L+T+EE +I GG G  VS F+A + 
Sbjct: 531 ETL-----DATVVDMRFVKPMDEALVREIANSHDLLVTIEENAIMGGAGGAVSEFLAREN 585

Query: 666 LLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATA---LSLLGR 712
           +L S +    + LPD Y+EHA P Q LA  GL    I A     L LL R
Sbjct: 586 ILKSVLH---LGLPDVYVEHAKPAQMLAECGLDEVGIEAAVRERLELLNR 632


>gi|398874776|ref|ZP_10629976.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM74]
 gi|398193999|gb|EJM81084.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM74]
          Length = 632

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 283/640 (44%), Positives = 376/640 (58%), Gaps = 38/640 (5%)

Query: 76  KEPT-PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           K PT P+LD    P  L+ L   EL+ LA E+R EL   V +T     + L  +ELT+AL
Sbjct: 11  KRPTTPLLDRANTPDGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIELTIAL 70

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H+VF  P D+++WDVG Q Y HKILTGRR  + TLR+KDG++ +  RSESEYD F  GH 
Sbjct: 71  HYVFDTPDDRLVWDVGHQAYPHKILTGRRERMGTLRQKDGVAAFPRRSESEYDTFGVGHS 130

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA LGMA+A  ++      + VI +G   AG A+EA+++A  +D+NM+VILND+  
Sbjct: 131 STSISAALGMAIAARLQNSERKAIAVIGDGALTAGMAFEALNHAPEVDANMLVILNDNDM 190

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+          ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+
Sbjct: 191 SI--------SRNVGGLSNYLAKILSSRTYASMREGSKKVLSRL-PGAWEIARRTEEYAK 241

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---R 371
           GM+ P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +HVVT++ +    
Sbjct: 242 GMLVP--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDL--KGPQFLHVVTKKGKGFAP 297

Query: 372 AE-DTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
           AE D     AI K  E      + P       Y   F E L   A  D  +V +   M+ 
Sbjct: 298 AEVDPIGYHAITK-LEPLDAPAAAPKKASGPKYSGVFGEWLCDMAAADPRLVGITPAMKE 356

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L  F E+FP RYFDV +AEQHAVT +AG+AC G KP   I S FLQR YDQ+V+DV 
Sbjct: 357 GSDLVAFSERFPLRYFDVAIAEQHAVTLAAGMACEGAKPVVAIYSTFLQRGYDQLVHDVA 416

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q L V F I  AGLVG DGPT  G+FD++F+ C+P M+VM PSDE+EL  M+ T   + 
Sbjct: 417 VQNLDVLFAIDRAGLVGEDGPTHAGSFDLSFLRCIPGMLVMTPSDENELRKML-TTGHLY 475

Query: 551 DRPVCFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
           + P   RYPRG    A +  DL      PIEIGKG V  +G  VALL +G  +   LK  
Sbjct: 476 EGPAAVRYPRGNGPNATIEKDLE-----PIEIGKGIVRRQGSKVALLVFGVQLAEALKVA 530

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG 665
             L     D TV D RF KPLD  LVRE+  +H  L+TVEE +I GG G  VS F+A + 
Sbjct: 531 ETL-----DATVVDMRFVKPLDEALVREIAGSHDLLVTVEENAIMGGAGGAVSEFLAREN 585

Query: 666 LLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAAT 705
           +L S +    + LPD Y+EHA P Q LA  GL    I A+
Sbjct: 586 ILKSMLH---LGLPDIYVEHAKPAQMLAECGLDEAGIEAS 622


>gi|398996324|ref|ZP_10699183.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM21]
 gi|398127098|gb|EJM16513.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM21]
          Length = 632

 Score =  471 bits (1213), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 281/640 (43%), Positives = 377/640 (58%), Gaps = 38/640 (5%)

Query: 76  KEPT-PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           K PT P+LD    P  L+ L   EL+ LA E+R EL   V +T     + L  +ELT+AL
Sbjct: 11  KRPTTPLLDRANTPDGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIELTIAL 70

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H+VF  P D+++WDVG Q Y HKILTGRR  + TLR+KDG++ +  RSESEYD F  GH 
Sbjct: 71  HYVFDTPDDRLVWDVGHQAYPHKILTGRRERMGTLRQKDGVAAFPRRSESEYDTFGVGHS 130

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA LGMA+A  ++      + VI +G   AG A+EA+++A  +++NM+VILND+  
Sbjct: 131 STSISAALGMAIAARLQNSDRKAIAVIGDGALTAGMAFEALNHAPEVNANMLVILNDNDM 190

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+          ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+
Sbjct: 191 SI--------SRNVGGLSNYLAKILSSRTYASMREGSKKVLSRL-PGAWEIARRTEEYAK 241

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---R 371
           GM+ P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +HVVT++ +    
Sbjct: 242 GMLVP--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDL--KGPQFLHVVTKKGKGFAP 297

Query: 372 AE-DTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
           AE D     AI K  E      + P       Y   F E L   A  D  +V +   M+ 
Sbjct: 298 AEVDPIGYHAITK-LEPLDAPAAAPKKAGGPKYSGVFGEWLCDMAASDPRLVGITPAMKE 356

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L  F E+FP RYFDV +AEQHAVT +AG+AC G KP   I S FLQR YDQ+++DV 
Sbjct: 357 GSDLVAFSERFPLRYFDVAIAEQHAVTLAAGMACEGAKPVVAIYSTFLQRGYDQLIHDVA 416

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q L V F I  AGLVG DGPT  G+FD++F+ C+P M+VM PSDE+EL  M+ T   + 
Sbjct: 417 VQNLDVLFAIDRAGLVGEDGPTHAGSFDLSFLRCIPGMLVMTPSDENELRKML-TTGHLY 475

Query: 551 DRPVCFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
           + P   RYPRG    A +  DL      PIEIGKG V  +G  VALL +G  +   LK  
Sbjct: 476 NGPAAVRYPRGSGPNATIEKDLQ-----PIEIGKGIVRRQGSKVALLVFGVQLAEALKVA 530

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG 665
             L     D TV D RF KPLD  LVRE+  +H  L+TVEE +I GG G  VS F+A + 
Sbjct: 531 ETL-----DATVVDMRFVKPLDEALVREIAGSHELLVTVEENAIMGGAGGAVSEFLAREN 585

Query: 666 LLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAAT 705
           +L S +    + LPD+Y+EHA P Q LA  GL    I A+
Sbjct: 586 ILKSVLH---LGLPDHYVEHAKPAQMLAECGLDEAGIEAS 622


>gi|422680446|ref|ZP_16738718.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           tabaci str. ATCC 11528]
 gi|331009792|gb|EGH89848.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           tabaci str. ATCC 11528]
          Length = 630

 Score =  471 bits (1213), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 277/645 (42%), Positives = 385/645 (59%), Gaps = 41/645 (6%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD  + P  L+ L   EL+ LA E+R EL   V +T     + L  +ELT+ALH+VF
Sbjct: 15  TPLLDRADTPHGLRRLGEAELETLADELRLELLYSVGQTGGHFGAGLGVIELTIALHYVF 74

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR+ + TLR+KDG++ +  RSESEYD F  GH   S+
Sbjct: 75  DTPDDRLVWDVGHQAYPHKILTGRRARMSTLRQKDGVAAFPRRSESEYDTFGVGHSSTSI 134

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LGMA+A  ++G     + VI +G   AG A+EA+++A  + +NM+VILND+  S+  
Sbjct: 135 SAALGMAIASRLQGSERKSIAVIGDGALTAGMAFEALNHAPEVAANMLVILNDNDMSI-- 192

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                   ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+GM+ 
Sbjct: 193 ------SRNVGGLSNYLAKILSSRTYSSMREGSKKVLSRL-PGAWEIARRTEEYAKGMLV 245

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---RAE-D 374
           P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +HVVT++ +    AE D
Sbjct: 246 P--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDL--KGPQFLHVVTKKGKGFAPAEVD 301

Query: 375 TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
                AI K +    ++   P    +  Y   F + +   AE D  +V +   M+    L
Sbjct: 302 PIGYHAITKLE--PLNAPVAPKKISAPKYSAVFGQWICDMAEADSRLVGITPAMKEGSDL 359

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F E+FPERYFDV +AEQHAVT +AG+AC G KP   I S FLQR YDQ+V+DV  Q L
Sbjct: 360 VAFSERFPERYFDVAIAEQHAVTLAAGMACEGSKPVVAIYSTFLQRGYDQLVHDVAVQNL 419

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
            V F I  AGLVG DGPT  G+FD++++ C+P M+VM PSDE+EL  ++ T   +   P 
Sbjct: 420 DVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMVVMTPSDENELRKLLNT-GYLHTGPA 478

Query: 555 CFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLS 610
             RYPRG    A++ T L      P+EIGKG V  +G+ VA+L +G  +     A AL+ 
Sbjct: 479 AVRYPRGTGPNALIETGLD-----PVEIGKGVVRRQGQGVAILVFGVQL-----ADALVG 528

Query: 611 KLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDS 669
              +D TV D RF KPLD  LV E   NH  L+T+EE ++ GG G+ VS F+A   +L S
Sbjct: 529 AEKLDATVIDMRFVKPLDEALVSEAAANHELLVTLEENAVMGGAGAAVSEFLARANILKS 588

Query: 670 GVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAAT---ALSLLG 711
            +    + LPD Y+EHA P Q LA  GL    I A     L+L+G
Sbjct: 589 VLH---LGLPDTYVEHAKPAQMLAECGLDAQGIEAAINERLTLIG 630


>gi|289623774|ref|ZP_06456728.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           aesculi str. NCPPB 3681]
 gi|289646545|ref|ZP_06477888.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           aesculi str. 2250]
 gi|422581074|ref|ZP_16656218.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           aesculi str. 0893_23]
 gi|298160571|gb|EFI01593.1| 1-deoxy-D-xylulose 5-phosphate synthase [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|330865925|gb|EGH00634.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           aesculi str. 0893_23]
          Length = 630

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 277/645 (42%), Positives = 386/645 (59%), Gaps = 41/645 (6%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD  + P  L+ L   EL+ LA E+R EL   V +T     + L  +ELT+ALH+VF
Sbjct: 15  TPLLDRADTPHGLRRLGEAELETLADELRLELLYSVGQTGGHFGAGLGVIELTIALHYVF 74

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR+ + TLR+KDG++ +  RSESEYD F  GH   S+
Sbjct: 75  DTPDDRLVWDVGHQAYPHKILTGRRARMSTLRQKDGVAAFPRRSESEYDTFGVGHSSTSI 134

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LGMA+A  ++G     + VI +G   AG A+EA+++A  + +NM+VILND+  S+  
Sbjct: 135 SAALGMAIASRLQGSERKSIAVIGDGALTAGMAFEALNHAPEVAANMLVILNDNDMSI-- 192

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                   ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+GM+ 
Sbjct: 193 ------SRNVGGLSNYLAKILSSRTYSSMREGSKKVLSRL-PGAWEIARRTEEYAKGMLV 245

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---RAE-D 374
           P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +HVVT++ +    AE D
Sbjct: 246 P--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDL--KGPQFLHVVTKKGKGFAPAEVD 301

Query: 375 TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
                AI K +    ++  +P    +  Y   F + +   AE D  +V +   M+    L
Sbjct: 302 PIGYHAITKLE--PLNAPVVPKKISAPKYSAVFGQWICDMAEADSRLVGITPAMKEGSDL 359

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F E+FPERYFDV +AEQHAVT +AG+AC G KP   I S FLQR YDQ+V+DV  Q L
Sbjct: 360 VAFSERFPERYFDVAIAEQHAVTLAAGMACEGSKPVVAIYSTFLQRGYDQLVHDVAVQNL 419

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
            V F I  AGLVG DGPT  G+FD++++ C+P M+VM PSDE+EL  ++ T   +   P 
Sbjct: 420 DVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMVVMTPSDENELRKLLNT-GYLHTGPA 478

Query: 555 CFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLS 610
             RYPRG    A++ T L      P+EIGKG V  +G+ VA+L +G  +     A AL+ 
Sbjct: 479 AVRYPRGTGPDALIETGLD-----PVEIGKGVVRRQGQGVAILVFGVQL-----ADALVV 528

Query: 611 KLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDS 669
              +D TV D RF KPLD  LV E   NH  L+T+EE ++ GG G+ VS F+A   +L S
Sbjct: 529 AEKLDATVIDMRFVKPLDEALVSEAAANHELLVTLEENAVMGGAGAAVSEFLARANILKS 588

Query: 670 GVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATA---LSLLG 711
            +    + LPD Y+EHA P Q LA  GL    I A     L+L+G
Sbjct: 589 VLH---LGLPDTYVEHAKPAQMLAECGLDAQGIEAAINARLALIG 630


>gi|330505138|ref|YP_004382007.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas mendocina
           NK-01]
 gi|328919424|gb|AEB60255.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas mendocina
           NK-01]
          Length = 631

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 277/642 (43%), Positives = 381/642 (59%), Gaps = 35/642 (5%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD    P  L+ L   +L+ LA E+R  L   V ++     + L  +ELT+ALH+VF
Sbjct: 15  TPLLDSANTPDELRRLAEADLETLADELRQYLLYSVGQSGGHFGAGLGVIELTIALHYVF 74

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR  + TLR+KDG++ +  RSESEYD F  GH   S+
Sbjct: 75  DTPDDRLVWDVGHQAYPHKILTGRRERMGTLRQKDGLAAFPRRSESEYDTFGVGHSSTSI 134

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LGMA+A  +KG++   V VI +G   AG A+EA+++A  + +NM+VILND+  S+  
Sbjct: 135 SAALGMAIAARLKGEKRKSVAVIGDGALTAGMAFEALNHATDVGANMLVILNDNDMSI-- 192

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                   ++  LS+ L++I SS+++  +RE +K +  R+  G  E A KV+E+A+GM+ 
Sbjct: 193 ------SKNVGGLSNYLAKIISSRTYASMREGSKKILSRL-PGAWEIARKVEEHAKGMLV 245

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR----RAED 374
           P   TLFEELG  Y+GP+DGH++  L++ L+ +  L   GP  +HVVT++ +       D
Sbjct: 246 P--GTLFEELGWNYVGPIDGHDLPTLLATLRNMRDLD--GPQFLHVVTKKGKGFAPAEAD 301

Query: 375 TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
                AI K +       + P       Y + F + L   A  D  +V +   M+    L
Sbjct: 302 PIGYHAITKLE--PVTPVAAPKKPSGPKYSNVFGQWLCDMAAADNRLVGITPAMKEGSDL 359

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F E+FPERYFDV +AEQHAVT +AG+AC G KP   I S FLQRAYDQ+++DV  Q L
Sbjct: 360 VAFSERFPERYFDVAIAEQHAVTLAAGMACEGAKPVVAIYSTFLQRAYDQLIHDVAVQHL 419

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
            V F I  AGLVG DGPT  G+FD++++ C+P M+VM PSDE+EL  M+ T   + D P 
Sbjct: 420 DVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDENELRRML-TTGHLFDGPA 478

Query: 555 CFRYPRGAIVRTDLPGYRGI-PIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
             RYPRG+    + P   G+ P+EIGK  V  +GK VALL +G  +   L+    L    
Sbjct: 479 AVRYPRGS--GPNAPLDAGLEPLEIGKAVVRRQGKGVALLAFGVQLAEALRVGETL---- 532

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVK 672
            D TV D RF KPLD  L+REL  +H  L+T+EE SI GG GS VS F A +   +  V 
Sbjct: 533 -DATVVDMRFVKPLDEALLRELAGSHELLVTLEENSIMGGAGSAVSEFFAAE---NRQVP 588

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATA---LSLLG 711
              + LPD Y+EHA P+Q LA  GL    I A     LSL+G
Sbjct: 589 MLHLGLPDYYVEHAKPSQMLAECGLDEAGIEAAVRMRLSLIG 630


>gi|398865852|ref|ZP_10621361.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM78]
 gi|398242301|gb|EJN27920.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM78]
          Length = 632

 Score =  471 bits (1211), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 282/640 (44%), Positives = 376/640 (58%), Gaps = 38/640 (5%)

Query: 76  KEPT-PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           K PT P+LD    P  L+ L   EL+ LA E+R EL   V +T     + L  +ELT+AL
Sbjct: 11  KRPTTPLLDRANTPDGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIELTIAL 70

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H+VF  P D+++WDVG Q Y HKILTGRR  + TLR+KDG++ +  RSESEYD F  GH 
Sbjct: 71  HYVFDTPDDRLVWDVGHQAYPHKILTGRRERMGTLRQKDGVAAFPRRSESEYDTFGVGHS 130

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA LGMA+A  ++      + VI +G   AG A+EA+++A  +D+NM+VILND+  
Sbjct: 131 STSISAALGMAIAARLQNSDRKAIAVIGDGALTAGMAFEALNHAPEVDANMLVILNDNDM 190

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+          ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+
Sbjct: 191 SI--------SRNVGGLSNYLAKILSSRTYASMREGSKKVLSRL-PGAWEIARRTEEYAK 241

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---R 371
           GM+ P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +H+VT++ +    
Sbjct: 242 GMLVP--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDL--KGPQFLHIVTKKGKGFAP 297

Query: 372 AE-DTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
           AE D     AI K  E      + P       Y   F E L   A  D  +V +   M+ 
Sbjct: 298 AEVDPIGYHAITK-LEPLDAPAAAPKKASGPKYSGVFGEWLCDMAAADPRLVGITPAMKE 356

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L  F E+FP RYFDV +AEQHAVT +AG+AC G KP   I S FLQR YDQ+V+DV 
Sbjct: 357 GSDLVAFSERFPLRYFDVAIAEQHAVTLAAGMACEGAKPVVAIYSTFLQRGYDQLVHDVA 416

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q L V F I  AGLVG DGPT  G+FD++F+ C+P M+VM PSDE+EL  M+ T   + 
Sbjct: 417 VQNLDVLFAIDRAGLVGEDGPTHAGSFDLSFLRCIPGMLVMTPSDENELRKML-TTGHLY 475

Query: 551 DRPVCFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
           + P   RYPRG    A +  DL      PIEIGKG V  +G  VALL +G  +   LK  
Sbjct: 476 EGPAAVRYPRGNGPNATIEKDLE-----PIEIGKGVVRRQGSKVALLVFGVQLAEALKVA 530

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG 665
             L     D TV D RF KPLD  LVRE+  +H  L+TVEE +I GG G  VS F+A + 
Sbjct: 531 ETL-----DATVVDMRFVKPLDEALVREIAASHDLLVTVEENAIMGGAGGAVSEFLAREN 585

Query: 666 LLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAAT 705
           +L S +    + LPD Y+EHA P Q LA  GL    I A+
Sbjct: 586 ILKSVLH---LGLPDIYVEHAKPAQMLAECGLDEAGIEAS 622


>gi|398942445|ref|ZP_10670287.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp.
           GM41(2012)]
 gi|398160625|gb|EJM48890.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp.
           GM41(2012)]
          Length = 632

 Score =  471 bits (1211), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 280/640 (43%), Positives = 377/640 (58%), Gaps = 38/640 (5%)

Query: 76  KEPT-PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           K PT P+LD    P  L+ L   EL+ LA E+R EL   V +T     + L  +ELT+AL
Sbjct: 11  KRPTTPLLDRANTPDGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIELTIAL 70

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H+VF  P D+++WDVG Q Y HKILTGRR  + TLR+KDG++ +  RSESEYD F  GH 
Sbjct: 71  HYVFDTPDDRLVWDVGHQAYPHKILTGRRERMGTLRQKDGVAAFPRRSESEYDTFGVGHS 130

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA LGMA+A  ++      + VI +G   AG A+EA+++A  +D+NM+VILND+  
Sbjct: 131 STSISAALGMAIAARLQNSDRKAIAVIGDGALTAGMAFEALNHAPEVDANMLVILNDNDM 190

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+          ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+
Sbjct: 191 SI--------SRNVGGLSNYLAKILSSRTYASMREGSKKVLSRL-PGAWEIARRTEEYAK 241

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---R 371
           GM+ P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +HVVT++ +    
Sbjct: 242 GMLVP--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDL--KGPQFLHVVTKKGKGFAP 297

Query: 372 AE-DTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
           AE D     AI K  E      + P       Y   F E L   A  D  +V +   M+ 
Sbjct: 298 AEVDPIGYHAITK-LEPLDAPAAAPKKAGGPKYSGVFGEWLCDMAASDPRLVGITPAMKE 356

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L  F E+FP RYFDV +AEQHAVT +AG+AC G KP   I S FLQR YDQ+++DV 
Sbjct: 357 GSDLVAFSERFPLRYFDVAIAEQHAVTLAAGMACEGAKPVVAIYSTFLQRGYDQLIHDVA 416

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q L V F I  AGLVG DGPT  G+FD++F+ C+P M+VM PSDE+EL  M+ T   + 
Sbjct: 417 VQNLDVLFAIDRAGLVGEDGPTHAGSFDLSFLRCIPGMLVMTPSDENELRKML-TTGHLF 475

Query: 551 DRPVCFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
           + P   RYPRG    A +  +L      PIEIGKG V  +G  VALL +G  +   LK  
Sbjct: 476 NGPAAVRYPRGSGPNATIEKNLE-----PIEIGKGVVRRQGSKVALLVFGVQLAEALKVA 530

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG 665
             L     D TV D RF KPLD  LVRE+  +H  L+T+EE +I GG G  VS F+A + 
Sbjct: 531 ETL-----DATVVDMRFVKPLDEALVREIAGSHELLVTIEENAIMGGAGGAVSEFLAREN 585

Query: 666 LLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAAT 705
           +L S +    + LPD+Y+EHA P Q LA  GL    I A+
Sbjct: 586 ILKSMLH---LGLPDSYVEHAKPAQMLAECGLDEAGIEAS 622


>gi|422402852|ref|ZP_16479912.1| 1-deoxy-D-xylulose-5-phosphate synthase, partial [Pseudomonas
           syringae pv. glycinea str. race 4]
 gi|330872287|gb|EGH06436.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           glycinea str. race 4]
          Length = 622

 Score =  471 bits (1211), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 277/645 (42%), Positives = 385/645 (59%), Gaps = 41/645 (6%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD  + P  L+ L   EL+ LA E+R EL   V +T     + L  +ELT+ALH+VF
Sbjct: 7   TPLLDRADTPHGLRRLGEAELETLADELRLELLYSVGQTGGHFGAGLGVIELTIALHYVF 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR+ + TLR+KDG++ +  RSESEYD F  GH   S+
Sbjct: 67  DTPDDRLVWDVGHQAYPHKILTGRRARMSTLRQKDGVAAFPRRSESEYDTFGVGHSSTSI 126

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LGMA+A  ++G     + VI +G   AG A+EA+++A  + +NM+VILND+  S+  
Sbjct: 127 SAALGMAIASRLQGSERKSIAVIGDGALTAGMAFEALNHAPEVAANMLVILNDNDMSI-- 184

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                   ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+GM+ 
Sbjct: 185 ------SRNVGGLSNYLAKILSSRTYSSMREGSKKVLSRL-PGAWEIARRTEEYAKGMLV 237

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---RAE-D 374
           P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +HVVT++ +    AE D
Sbjct: 238 P--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDL--KGPQFLHVVTKKGKGFAPAEVD 293

Query: 375 TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
                AI K +    ++   P    +  Y   F + +   AE D  +V +   M+    L
Sbjct: 294 PIGYHAITKLE--PLNAPVAPKKISAPKYSAVFGQWICDMAEADSRLVGITPAMKEGSDL 351

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F E+FPERYFDV +AEQHAVT +AG+AC G KP   I S FLQR YDQ+V+DV  Q L
Sbjct: 352 VAFSERFPERYFDVAIAEQHAVTLAAGMACEGSKPVVAIYSTFLQRGYDQLVHDVAVQNL 411

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
            V F I  AGLVG DGPT  G+FD++++ C+P M+VM PSDE+EL  ++ T   +   P 
Sbjct: 412 DVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMVVMTPSDENELRKLLNT-GYLHTGPA 470

Query: 555 CFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLS 610
             RYPRG    A++ T L      P+EIGKG V  +G+ VA+L +G  +     A AL+ 
Sbjct: 471 AVRYPRGTGPNALIETGLD-----PVEIGKGVVRRQGQGVAILVFGVQL-----ADALVV 520

Query: 611 KLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDS 669
              +D TV D RF KPLD  LV E   NH  L+T+EE ++ GG G+ VS F+A   +L S
Sbjct: 521 AEKLDATVIDMRFVKPLDEALVSEAAANHELLVTLEENAVMGGAGAAVSEFLARANILKS 580

Query: 670 GVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAAT---ALSLLG 711
            +    + LPD Y+EHA P Q LA  GL    I A     L+L+G
Sbjct: 581 VLH---LGLPDTYVEHAKPAQMLAECGLDAQGIEAAINERLALIG 622


>gi|416019023|ref|ZP_11565916.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           glycinea str. B076]
 gi|416024128|ref|ZP_11568307.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|422594222|ref|ZP_16668513.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           lachrymans str. M301315]
 gi|422603974|ref|ZP_16675992.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           mori str. 301020]
 gi|320321851|gb|EFW77947.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           glycinea str. B076]
 gi|320331042|gb|EFW87016.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|330886860|gb|EGH20295.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           mori str. 301020]
 gi|330984530|gb|EGH82633.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           lachrymans str. M301315]
          Length = 630

 Score =  471 bits (1211), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 277/645 (42%), Positives = 385/645 (59%), Gaps = 41/645 (6%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD  + P  L+ L   EL+ LA E+R EL   V +T     + L  +ELT+ALH+VF
Sbjct: 15  TPLLDRADTPHGLRRLGEAELETLADELRLELLYSVGQTGGHFGAGLGVIELTIALHYVF 74

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR+ + TLR+KDG++ +  RSESEYD F  GH   S+
Sbjct: 75  DTPDDRLVWDVGHQAYPHKILTGRRARMSTLRQKDGVAAFPRRSESEYDTFGVGHSSTSI 134

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LGMA+A  ++G     + VI +G   AG A+EA+++A  + +NM+VILND+  S+  
Sbjct: 135 SAALGMAIASRLQGSERKSIAVIGDGALTAGMAFEALNHAPEVAANMLVILNDNDMSI-- 192

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                   ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+GM+ 
Sbjct: 193 ------SRNVGGLSNYLAKILSSRTYSSMREGSKKVLSRL-PGAWEIARRTEEYAKGMLV 245

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---RAE-D 374
           P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +HVVT++ +    AE D
Sbjct: 246 P--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDL--KGPQFLHVVTKKGKGFAPAEVD 301

Query: 375 TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
                AI K +    ++   P    +  Y   F + +   AE D  +V +   M+    L
Sbjct: 302 PIGYHAITKLE--PLNAPVAPKKISAPKYSAVFGQWICDMAEADSRLVGITPAMKEGSDL 359

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F E+FPERYFDV +AEQHAVT +AG+AC G KP   I S FLQR YDQ+V+DV  Q L
Sbjct: 360 VAFSERFPERYFDVAIAEQHAVTLAAGMACEGSKPVVAIYSTFLQRGYDQLVHDVAVQNL 419

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
            V F I  AGLVG DGPT  G+FD++++ C+P M+VM PSDE+EL  ++ T   +   P 
Sbjct: 420 DVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMVVMTPSDENELRKLLNT-GYLHTGPA 478

Query: 555 CFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLS 610
             RYPRG    A++ T L      P+EIGKG V  +G+ VA+L +G  +     A AL+ 
Sbjct: 479 AVRYPRGTGPNALIETGLD-----PVEIGKGVVRRQGQGVAILVFGVQL-----ADALVV 528

Query: 611 KLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDS 669
              +D TV D RF KPLD  LV E   NH  L+T+EE ++ GG G+ VS F+A   +L S
Sbjct: 529 AEKLDATVIDMRFVKPLDEALVSEAAANHELLVTLEENAVMGGAGAAVSEFLARANILKS 588

Query: 670 GVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAAT---ALSLLG 711
            +    + LPD Y+EHA P Q LA  GL    I A     L+L+G
Sbjct: 589 VLH---LGLPDTYVEHAKPAQMLAECGLDAQGIEAAINERLALIG 630


>gi|313200382|ref|YP_004039040.1| deoxyxylulose-5-phosphate synthase [Methylovorus sp. MP688]
 gi|312439698|gb|ADQ83804.1| deoxyxylulose-5-phosphate synthase [Methylovorus sp. MP688]
          Length = 613

 Score =  470 bits (1210), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 264/637 (41%), Positives = 387/637 (60%), Gaps = 43/637 (6%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+LD +++P +L+ L  K+L +LA E+R+ +   V++T   L S+L  VELT+ALH+VF+
Sbjct: 3   PLLDTIQSPEQLRLLDRKQLPELAQELRTFVIDSVARTGGHLSSNLGVVELTIALHYVFN 62

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG QTY HKILTGRR  +  LR  +GI+G+  R+ES YD F  GH   S+S
Sbjct: 63  TPEDRLVWDVGHQTYPHKILTGRRDGMADLRMPNGIAGFPRRNESPYDTFGTGHSSTSIS 122

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           A LGMA+A   +G     V +I +G   AG A+EA++NAG +D+N++VILND+  S+ P 
Sbjct: 123 AALGMAIAAQQQGSERRAVAIIGDGAMTAGMAFEALNNAGAMDANLLVILNDNDMSISP- 181

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                  ++ AL + L+++ S + +  +R   + +   +   M E+A + +E+ +GM+ P
Sbjct: 182 -------NVGALHNYLAKLLSGRFYASMRRSGEKVLGVV-PPMLEFAKRAEEHVKGMVTP 233

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---RAEDTQ 376
              TLFEE G  YIGP+DGH+IE LI+ L+ +  L   GP  +H+VT++      AED  
Sbjct: 234 --GTLFEEFGFNYIGPIDGHDIETLITTLKNIRKL--KGPQFLHIVTQKGHGYAPAEDNP 289

Query: 377 -KSEAIEK--QQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
            K   + K     G S + S       +TY   F + LV  AE+D+ ++ +   M     
Sbjct: 290 GKYHGVGKFDPSNGCSVATS-----SKKTYTQVFSDWLVDMAEQDERLIGITPAMCDGSG 344

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L  F EKFP+R+FDVG+AEQHA+TF+AG+AC G+KP   I S FLQRAYDQ+++D+  Q 
Sbjct: 345 LNAFAEKFPKRFFDVGIAEQHALTFAAGMACDGMKPVVAIYSTFLQRAYDQLIHDIALQN 404

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPV F I  AGLVG+DGPT  G+FD++FM C+PNM+++APSDE+E   M+ T A   D P
Sbjct: 405 LPVVFAIDRAGLVGADGPTHAGSFDLSFMRCIPNMLILAPSDENECRQMLYT-AYQHDGP 463

Query: 554 VCFRYPR----GAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALL 609
              RYPR    GA+++  +       + IGKG+V   GK+VA+L +G+M+   L A   L
Sbjct: 464 SAVRYPRGGGPGAVIKKAM-----TALPIGKGEVRRHGKNVAILAFGSMLTPALAAGEKL 518

Query: 610 SKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-IGGFGSHVSHFIALDGLLD 668
                D TV + RF KPLD+ L+ EL  +H+ L+TVEE + +GG G+ V   +     ++
Sbjct: 519 -----DATVVNMRFVKPLDVALIAELAASHSLLVTVEENTLLGGAGAAVMEALQ---QIN 570

Query: 669 SGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAAT 705
             V    + LPD +I+H      LA  GL    I A+
Sbjct: 571 PQVATLSLGLPDTFIDHGVHETMLAECGLNAEGIIAS 607


>gi|257482377|ref|ZP_05636418.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           tabaci str. ATCC 11528]
          Length = 630

 Score =  470 bits (1210), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 277/645 (42%), Positives = 385/645 (59%), Gaps = 41/645 (6%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD  + P  L+ L   EL+ LA E+R EL   V +T     + L  +ELT+ALH+VF
Sbjct: 15  TPLLDRADTPHGLRRLGEAELETLADELRLELLYSVGQTGGHFGAGLGVIELTIALHYVF 74

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR+ + TLR+KDG++ +  RSESEYD F  GH   S+
Sbjct: 75  DTPDDRLVWDVGHQAYPHKILTGRRARMSTLRQKDGVAAFPRRSESEYDTFGVGHSSTSI 134

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LGMA+A  ++G     + VI +G   AG A+EA+++A  + +NM+VILND+  S+  
Sbjct: 135 SAALGMAIASRLQGSERKSIAVIGDGALTAGMAFEALNHAPEVAANMLVILNDNDMSI-- 192

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                   ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+GM+ 
Sbjct: 193 ------SRNVGGLSNYLAKILSSRTYSSMREGSKKVLSRL-PGAWEIARRTEEYAKGMLV 245

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---RAE-D 374
           P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +HVVT++ +    AE D
Sbjct: 246 P--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDL--KGPQFLHVVTKKGKGFAPAEVD 301

Query: 375 TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
                AI K +    ++   P    +  Y   F + +   AE D  +V +   M+    L
Sbjct: 302 PIGYHAITKLE--PLNAPVAPKKISAPKYSAVFGQWICDMAEADSRLVGITPAMKEGSDL 359

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F E+FPERYFDV +AEQHAVT +AG+AC G KP   I S FLQR YDQ+V+DV  Q L
Sbjct: 360 VAFSERFPERYFDVAIAEQHAVTLAAGMACEGSKPVVAIYSTFLQRGYDQLVHDVAVQNL 419

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
            V F I  AGLVG DGPT  G+FD++++ C+P M+VM PSDE+EL  ++ T   +   P 
Sbjct: 420 DVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMVVMTPSDENELRKLLNT-GYLHTGPA 478

Query: 555 CFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLS 610
             RYPRG    A++ T L      P+EIGKG V  +G+ VA+L +G  +     A AL+ 
Sbjct: 479 AVRYPRGTGPNALIETGLD-----PVEIGKGVVRRQGQGVAILVFGVQL-----ADALVV 528

Query: 611 KLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDS 669
              +D TV D RF KPLD  LV E   NH  L+T+EE ++ GG G+ VS F+A   +L S
Sbjct: 529 AEKLDATVIDMRFVKPLDEALVSEAAANHELLVTLEENAVMGGAGAAVSEFLARANILKS 588

Query: 670 GVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAAT---ALSLLG 711
            +    + LPD Y+EHA P Q LA  GL    I A     L+L+G
Sbjct: 589 VLH---LGLPDTYVEHAKPAQMLAECGLDAQGIEAAINERLTLIG 630


>gi|398977332|ref|ZP_10687049.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM25]
 gi|398138076|gb|EJM27106.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM25]
          Length = 632

 Score =  470 bits (1210), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 277/632 (43%), Positives = 373/632 (59%), Gaps = 38/632 (6%)

Query: 76  KEPT-PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           K PT P+LD    P  L+ L   EL+ LA E+R EL   V +T     + L  +ELT+AL
Sbjct: 11  KRPTTPLLDRANTPDGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIELTIAL 70

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H+VF  P D+++WDVG Q Y HKILTGRR  + +LR+KDGI+ +  RSESEYD F  GH 
Sbjct: 71  HYVFDTPDDRLVWDVGHQAYPHKILTGRRERMESLRQKDGIAAFPRRSESEYDTFGVGHS 130

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA LGMA+A  ++      + VI +G   AG A+EA+++A  +D+NM+VILND+  
Sbjct: 131 STSISAALGMAIAARLQNSDRKAIAVIGDGALTAGMAFEALNHAPEVDANMLVILNDNDM 190

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+          ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+
Sbjct: 191 SI--------SRNVGGLSNYLAKILSSRTYASMREGSKKVLSRL-PGAWEIARRTEEYAK 241

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---R 371
           GM+ P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +H+VT++ +    
Sbjct: 242 GMLVP--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDL--KGPQFLHIVTKKGKGFAP 297

Query: 372 AE-DTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
           AE D     AI K  E      + P       Y   F E L   A  D  +V +   M+ 
Sbjct: 298 AEVDPIGYHAITK-LEPLDAPAAAPKKAGGPKYSGVFGEWLCDMAAADPRLVGITPAMKE 356

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L  F E+FP RYFDV +AEQHAVT +AG+AC G KP   I S FLQR YDQ+V+DV 
Sbjct: 357 GSDLVAFSERFPLRYFDVAIAEQHAVTLAAGMACEGAKPVVAIYSTFLQRGYDQLVHDVA 416

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q L V F I  AGLVG DGPT  G+FD++F+ C+P M++M PSDE+EL  M+ T   + 
Sbjct: 417 VQNLDVLFAIDRAGLVGEDGPTHAGSFDLSFLRCIPGMVIMTPSDENELRKML-TTGHLY 475

Query: 551 DRPVCFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
           + P   RYPRG    A +  DL      PIEIGKG V  +G  VALL +G  +   LK  
Sbjct: 476 NGPAAVRYPRGTGPNATIEKDLE-----PIEIGKGVVRRQGSKVALLVFGVQMAEALKVA 530

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG 665
             L     D TV D RF KP+D  LVRE+  +H  L+T+EE +I GG G  VS F+A + 
Sbjct: 531 ETL-----DATVVDMRFVKPMDEALVREIANSHELLVTIEENAIMGGAGGAVSEFLAREN 585

Query: 666 LLDSGVKWRPIVLPDNYIEHASPTQQLALAGL 697
           +L S +    + LPD Y+EHA P Q LA  GL
Sbjct: 586 ILKSVLH---LGLPDVYVEHAKPAQMLAECGL 614


>gi|117924355|ref|YP_864972.1| 1-deoxy-D-xylulose-5-phosphate synthase [Magnetococcus marinus
           MC-1]
 gi|226740156|sp|A0L6H3.1|DXS_MAGSM RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|117608111|gb|ABK43566.1| 1-deoxy-D-xylulose-5-phosphate synthase [Magnetococcus marinus
           MC-1]
          Length = 622

 Score =  470 bits (1210), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 261/641 (40%), Positives = 388/641 (60%), Gaps = 28/641 (4%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           T +L  +++P  L+ L   +L Q+A E+R  +   VS++   L +SL  VELT+ALH+VF
Sbjct: 2   TTLLSTIDSPKALRQLNEAKLPQVAQEMRDHIIECVSQSGGHLGASLGVVELTIALHYVF 61

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+++WDVG Q+Y HK+LTGRR  + ++R++ G+SG+T RSES YDPF  GH   S+
Sbjct: 62  NTPDDRLVWDVGHQSYGHKVLTGRRDQLASIRQRHGLSGFTKRSESPYDPFGTGHSSTSI 121

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGY--LDSNMIVILNDSRHSL 256
           SA +GMA A    G +   V VI +G   AG A+EA+++AG+   D +++V+LND+  S+
Sbjct: 122 SAAMGMARAAKANGIQRKAVAVIGDGAMGAGMAFEALNHAGHDNHDLDLVVVLNDNEMSI 181

Query: 257 HPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGM 316
            P        ++ ALSS L+R+ S  ++   R+    + K I R M + A K +E+ +G+
Sbjct: 182 SP--------NVGALSSYLNRMLSGGAYNAFRDGTGKVLKTISRSMWDAAKKAEEHVKGL 233

Query: 317 IGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRR---AE 373
           + P   TLFEELG  Y GP++GH+ + L+  L+ V  LG  GP+L+HV+T++ +    AE
Sbjct: 234 VMP--GTLFEELGFTYFGPINGHDFDALLPTLRNVQKLG--GPILLHVITKKGKGFPPAE 289

Query: 374 D---TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
           +   T    A   +  G   S+S        +Y   F + L   AE++  I  + A M  
Sbjct: 290 EHPCTYHGVAPFDKDTGIIQSSS-----GGTSYTKVFAQELCALAEQNPHIHAITAAMRE 344

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L LF+++FPER+ DVG+AEQHAVTF+AGLA  G+ P   I S F+QRAYDQ+++DV 
Sbjct: 345 GTGLNLFEKRFPERFHDVGIAEQHAVTFAAGLATEGILPVVAIYSTFMQRAYDQLIHDVA 404

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q LPV F +  AGLVG+DG T  GA+D++++  +P M +MAP+DE+EL  M+ T  ++ 
Sbjct: 405 LQDLPVIFALDRAGLVGADGATHAGAYDLSYLRTVPGMTIMAPADENELRHMLHTAVAL- 463

Query: 551 DRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLS 610
           ++PV  RYPRG  +   LP      +EIG+G+ L +G+  A+L  G  V   L+A A+L 
Sbjct: 464 NKPVALRYPRGTAL--GLPPEPPHVLEIGRGRTLRKGEHAAILAVGQPVHPALEAAAILE 521

Query: 611 KLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSG 670
           + GI V+V DARF KPLD +L++E+  +   L+  E    GGFGS V   ++  G LD G
Sbjct: 522 QQGISVSVYDARFVKPLDQRLLQEVAMHGVVLVVEENAVQGGFGSAVLESLSNQGALDRG 581

Query: 671 VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
           +K R + +PD YI H +  +     GL    IA T   LLG
Sbjct: 582 LKIRCMGIPDRYIPHGTQKELRGEIGLDAVGIATTLKELLG 622


>gi|404497671|ref|YP_006721777.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter metallireducens
           GS-15]
 gi|418067360|ref|ZP_12704705.1| deoxyxylulose-5-phosphate synthase [Geobacter metallireducens RCH3]
 gi|118595485|sp|Q39RT4.1|DXS2_GEOMG RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase 2; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase 2; Short=DXP
           synthase 2; Short=DXPS 2
 gi|78195273|gb|ABB33040.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter metallireducens
           GS-15]
 gi|373558965|gb|EHP85282.1| deoxyxylulose-5-phosphate synthase [Geobacter metallireducens RCH3]
          Length = 635

 Score =  470 bits (1210), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 274/651 (42%), Positives = 381/651 (58%), Gaps = 36/651 (5%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +LD +  P  LK++  +EL  LA EIR  L   VS+T   L S+L AVEL+VALH+ F +
Sbjct: 4   LLDTITGPADLKNIPREELPGLADEIRRFLIETVSQTGGHLASNLGAVELSVALHYCFDS 63

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P DK++WDVG Q Y HKILTGRR   HT R+  GISG+  RSES +D F AGH   S+SA
Sbjct: 64  PADKLIWDVGHQAYTHKILTGRRESFHTQRQYKGISGFPKRSESPHDAFGAGHSSTSISA 123

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKI 260
           GLGMA A+D+KG     + VI +G+   G AYEA++ AG+L  N+IV+LND+  S+    
Sbjct: 124 GLGMAAAQDLKGSGSRAIAVIGDGSLTGGMAYEALNQAGHLKKNLIVVLNDNEMSI---- 179

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKR---IGRGMHEWAAKVDEYARGMI 317
                 ++ A SS +SR  +   FR+L++  +G+ +    IG+ +  +A + +   +G +
Sbjct: 180 ----SQNVGAFSSFVSRKMTGSDFRKLKKEMQGLLENIPAIGKDILHFARRAENSLKGFL 235

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQK 377
            P    LFE LG  YIGP+ GH++  L+ V + V  L   GPVLVHV+T + +  +  ++
Sbjct: 236 TP--GMLFEALGFDYIGPIPGHDLPQLLEVFENVKGL--EGPVLVHVMTTKGKGYQPAEE 291

Query: 378 SEAIEKQQEGASDSNSLPFGNY--SRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQ 435
           + A          +     G    + +Y   F   LV  AE+D+ I+ + A M     L 
Sbjct: 292 NPAAFHGVGPFDVATGKTTGGKPGAASYTGVFGATLVKLAEEDEKIIAITAAMPDGTGLT 351

Query: 436 LFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLP 495
            F ++FPER+FDVG+AEQHA+TF+AGLA  G +P   I S FLQRAYDQV +DV  Q+LP
Sbjct: 352 PFAKRFPERFFDVGIAEQHALTFAAGLAADGFRPVTAIYSTFLQRAYDQVFHDVCLQKLP 411

Query: 496 VRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVC 555
           V   +   GLVG DGPT  G FD++++  LP M +MAP DE+EL  M+ T A    RPV 
Sbjct: 412 VTMALDRGGLVGDDGPTHHGTFDLSYLRHLPEMTLMAPKDENELQHMLKT-AIYAGRPVA 470

Query: 556 FRYPRGAIVRTDLPGYRGIP-------IEIGKGKVLVEGKDVALLGYGAMVQNCLKARAL 608
            RYPRGA       GY G+P       +EIG+G++L EG DVA++  G+ V    +A  L
Sbjct: 471 LRYPRGA-------GY-GLPLDQTIQSLEIGRGELLTEGDDVAIVAIGSTVYPAQEAAKL 522

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLL 667
           L   GI  TV +ARF KPLD +L+    +    ++TVEE ++ GGFGS V   +A +G+ 
Sbjct: 523 LEARGIRATVVNARFVKPLDRELILGAARRTGCIVTVEENALQGGFGSAVLELLADEGMT 582

Query: 668 DSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALL 718
           D  V+ + I +PD +IE     Q     GL G  IAAT  + L    +A L
Sbjct: 583 D--VRAKRIGIPDRFIEQGPQPQLRKDLGLDGAGIAATVEAFLTAKGQAAL 631


>gi|257095635|ref|YP_003169276.1| 1-deoxy-D-xylulose-5-phosphate synthase [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257048159|gb|ACV37347.1| deoxyxylulose-5-phosphate synthase [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 629

 Score =  470 bits (1210), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 270/635 (42%), Positives = 382/635 (60%), Gaps = 40/635 (6%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+LD + +P ++++L  ++L QLA E+R+ L   VS+T   L S+L  VELTVALHHVF 
Sbjct: 5   PLLDTISDPAQVRALDRRQLPQLADELRAFLVDSVSRTGGHLSSNLGTVELTVALHHVFD 64

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG QTYAHK+LTGRR+ +  LR   G+SG+  RSES YD F  GH   S+S
Sbjct: 65  TPHDRLVWDVGHQTYAHKVLTGRRAGMAKLRMHGGVSGFPKRSESRYDTFGVGHSSTSIS 124

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           A LGMA+A  IKG+   +V +I +G   AGQA+EA++NAG  D++M+VILND+  S+ P 
Sbjct: 125 AALGMALAAKIKGETRKVVAIIGDGAMSAGQAFEALNNAGVADADMLVILNDNDMSISP- 183

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                   + AL+  L+R+ S  +F   R+  + +       + E+A + +E+ +GM+ P
Sbjct: 184 -------PVGALNRYLARLFSGSTFNAARKAGEKILD-FSPSLREFAKRAEEHVKGMLTP 235

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN---RRAE-DT 375
              TLFEELGL YIGP+DGH++E L+  LQ +  L   GP  +HV+T++    + AE D 
Sbjct: 236 --GTLFEELGLNYIGPIDGHDLESLVPTLQNLKHL--KGPQFLHVITKKGQGYKLAEVDP 291

Query: 376 QKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQ 435
                + K +     +   P G    TY   F + L   A  D  +V +   M     L 
Sbjct: 292 ILYHGVSKFKPEVGIAGG-PTGAKP-TYTQVFGDWLCDMAAADPRLVGITPAMREGSGLL 349

Query: 436 LFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLP 495
            F E++P+RY+DVG+AEQHAVTF+AGLAC GL+P   I S FLQR YDQ+V+DV  Q LP
Sbjct: 350 RFSERYPQRYYDVGIAEQHAVTFAAGLACEGLRPVLAIYSTFLQRGYDQLVHDVALQNLP 409

Query: 496 VRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVC 555
           V F +   GLVG+DGPT  GAFDI+F++C+PN++VM P+DEDE   M+ T   +D  P  
Sbjct: 410 VVFALDRGGLVGADGPTHHGAFDISFLTCIPNLVVMTPTDEDECRKMLTTAYRLDG-PSA 468

Query: 556 FRYPRG-----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLS 610
            RYPRG     AI +  +    G+P  +GKG++   G+DVALL +G+M+   L A     
Sbjct: 469 VRYPRGTGPGVAIEKALV----GLP--VGKGEIRRRGRDVALLAFGSMLTPALAAGE--- 519

Query: 611 KLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-IGGFGSHVSHFIALDGLLDS 669
              ID +VA+ RF KP+D +L+  L   H+ L++VEE + IGG GS V   +     + S
Sbjct: 520 --DIDASVANMRFVKPIDRELILALAAEHSLLVSVEENAVIGGAGSEVERVLE---EIAS 574

Query: 670 GVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAA 704
             +   + +PD++IEH      LA  GL    I A
Sbjct: 575 PTRLLRLGIPDHFIEHGDQALLLAEVGLDRDGIVA 609


>gi|398969623|ref|ZP_10682973.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM30]
 gi|398141760|gb|EJM30671.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM30]
          Length = 632

 Score =  470 bits (1210), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 277/632 (43%), Positives = 375/632 (59%), Gaps = 38/632 (6%)

Query: 76  KEPT-PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           K PT P+LD    P  L+ L   EL+ LA E+R EL   V +T     + L  +ELT+AL
Sbjct: 11  KRPTTPLLDRANTPDGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIELTIAL 70

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H+VF  P D+++WDVG Q Y HKILTGRR  + TLR+KDGI+ +  R+ESEYD F  GH 
Sbjct: 71  HYVFDTPDDRLVWDVGHQAYPHKILTGRRQRMETLRQKDGIAAFPRRAESEYDTFGVGHS 130

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA LGMA+A  ++      + VI +G   AG A+EA+++A  +++NM+VILND+  
Sbjct: 131 STSISAALGMAIAARLQNSDRKAIAVIGDGALTAGMAFEALNHAPEVNANMLVILNDNDM 190

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+          ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+
Sbjct: 191 SI--------SRNVGGLSNYLAKILSSRTYASMREGSKKVLSRL-PGAWEIARRTEEYAK 241

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---R 371
           GM+ P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +H+VT++ +    
Sbjct: 242 GMLVP--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDL--KGPQFLHIVTKKGKGFAP 297

Query: 372 AE-DTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
           AE D     AI K  E      + P       Y   F E L   A  D  +V +   M+ 
Sbjct: 298 AEVDPIGYHAITK-LEPVDAPAAAPKKAGGPKYSAVFGEWLCDMAAADPRLVGITPAMKE 356

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L  F E+FP RYFDV +AEQHAVTF+AG+AC G KP   I S FLQR YDQ+V+DV 
Sbjct: 357 GSDLVAFSERFPLRYFDVAIAEQHAVTFAAGMACEGAKPVVAIYSTFLQRGYDQLVHDVA 416

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q L V F I  AGLVG DGPT  G+FD++++ C+P M++M PSDE+EL  M+ T   + 
Sbjct: 417 VQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMVIMTPSDENELRKML-TTGHLY 475

Query: 551 DRPVCFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
           + P   RYPRG    A +  DL      PIEIGKG V  +G +VALL +G  +   LK  
Sbjct: 476 NGPAAVRYPRGTGPNATIDKDLE-----PIEIGKGIVRRQGSNVALLVFGVQLSEALKVA 530

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG 665
             L     D TV D RF KPLD  LVRE+  +H  L+T+EE +I GG G  VS F+A + 
Sbjct: 531 EKL-----DATVVDMRFVKPLDEALVREIAGSHELLVTIEENAIMGGAGGAVSEFLAREN 585

Query: 666 LLDSGVKWRPIVLPDNYIEHASPTQQLALAGL 697
           +L S +    + LPD Y+EHA P Q LA  GL
Sbjct: 586 ILKSMLH---LGLPDIYVEHAKPAQMLAECGL 614


>gi|409397082|ref|ZP_11248025.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. Chol1]
 gi|409118584|gb|EKM94983.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. Chol1]
          Length = 632

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 269/645 (41%), Positives = 381/645 (59%), Gaps = 34/645 (5%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD    P +L+ L   EL +LA E+R +L   V +T     + L  +ELT+ALH+VF
Sbjct: 15  TPVLDRAATPEQLRRLGEAELDELANELRQDLLFSVGQTGGHFGAGLGVIELTIALHYVF 74

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR  + TLR+KDG++ +  RSESEYD F  GH   S+
Sbjct: 75  DTPDDRLVWDVGHQAYPHKILTGRRQRMSTLRQKDGLAAFPRRSESEYDTFGVGHSSTSI 134

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
            A LGMA+A  +KG++   + VI +G   AG A+EA+++A  + +NM+V+LND+  S+  
Sbjct: 135 GAALGMAIAARLKGEKRKAIAVIGDGALTAGMAFEALNHAPEVGANMLVVLNDNDMSI-- 192

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                   ++  +S+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+GM+ 
Sbjct: 193 ------SRNVGGMSNYLAKILSSRTYASMREGSKKVLSRL-PGAWEIARRTEEYAKGMLV 245

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR----RAED 374
           P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +HVVT++ +       D
Sbjct: 246 P--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLD--GPQFLHVVTKKGKGFAPAEAD 301

Query: 375 TQKSEAIEKQQE-GASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
                AI K +  GA      P G     Y + F + L   A  D  +  +   M+    
Sbjct: 302 PITWHAISKLEPVGAPAKPKQPSGP---KYSNVFGQWLCDMAAADPRLTGITPAMKEGSD 358

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L  F E++ +RYFDV +AEQHAVT +AG+AC GLKP   I S FLQRAYDQ+++DV  Q 
Sbjct: 359 LVAFSERYADRYFDVAIAEQHAVTLAAGMACEGLKPVVAIYSTFLQRAYDQLIHDVAVQN 418

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           L V F I  AGLVG DGPT  G+FD++++ C+P M++M PSDE+E+  M+ T   + + P
Sbjct: 419 LDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLIMTPSDENEMRRML-TTGYLFEGP 477

Query: 554 VCFRYPRGAIVRTDL-PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
              RYPRG+     + PG    P+EIGKG V  +GK VALL +G  +   L+    L   
Sbjct: 478 AAVRYPRGSGPNATIEPGL--APLEIGKGVVRRQGKRVALLVFGVQLPEALQVGETL--- 532

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGV 671
             D TV D RF KPLD  L+R L   H FL+T+EE S+ GG GS V+ F+A + ++   +
Sbjct: 533 --DATVVDMRFVKPLDEALLRRLAAEHEFLVTIEENSVMGGAGSAVAEFLAAEAVV---M 587

Query: 672 KWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREA 716
               + LPD+Y+EHA P + LA  GL    I A     L    EA
Sbjct: 588 PLLHLGLPDSYVEHAKPNEMLAECGLDAAGIEAAVRQRLAALGEA 632


>gi|398891057|ref|ZP_10644497.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM55]
 gi|398187292|gb|EJM74636.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM55]
          Length = 632

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 285/650 (43%), Positives = 380/650 (58%), Gaps = 41/650 (6%)

Query: 76  KEPT-PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           K PT P+LD    P  L+ L   EL+ LA E+R EL   V +T     + L  +ELT+AL
Sbjct: 11  KRPTTPLLDRANTPDGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIELTIAL 70

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H+VF  P D+++WDVG Q Y HKILTGRR  + TLR+KDG++ +  RSESEYD F  GH 
Sbjct: 71  HYVFDTPDDRLVWDVGHQAYPHKILTGRRERMGTLRQKDGVAAFPRRSESEYDTFGVGHS 130

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA LGMA+A  ++      + VI +G   AG A+EA+++A  +D+NM+VILND+  
Sbjct: 131 STSISAALGMAIAARLQNSDRKAIAVIGDGALTAGMAFEALNHAPEVDANMLVILNDNDM 190

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+          ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+
Sbjct: 191 SI--------SHNVGGLSNYLAKILSSRTYASMREGSKKVLSRL-PGAWEIARRTEEYAK 241

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---R 371
           GM+ P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +HVVT++ +    
Sbjct: 242 GMLVP--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDL--KGPQFLHVVTKKGKGFAP 297

Query: 372 AE-DTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
           AE D     AI K  E      + P       Y   F E L   A  D  +V +   M+ 
Sbjct: 298 AEVDPIGYHAITK-LEPLDAPAAAPKKASGPKYSGVFGEWLCDMAAADPRLVGITPAMKE 356

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L  F E+FP RYFDV +AEQHAVT +AG+AC G KP   I S FLQR YDQ+V+DV 
Sbjct: 357 GSDLVAFSERFPLRYFDVAIAEQHAVTLAAGMACEGAKPVVAIYSTFLQRGYDQLVHDVA 416

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q L V F I  AGLVG DGPT  G+FD++++ C+P M+VM PSDE+EL  M+ T   + 
Sbjct: 417 VQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDENELRKML-TTGHLY 475

Query: 551 DRPVCFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
           + P   RYPRG    A +  DL      PIEIGKG V  +G  VALL +G  +   LK  
Sbjct: 476 EGPAAVRYPRGNGPNATIEKDLE-----PIEIGKGVVRRQGSKVALLVFGVQLAEALKVA 530

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG 665
             L     D TV D RF KPLD +LVRE+  +H  L+TVEE +I GG G  V  F+A + 
Sbjct: 531 ETL-----DATVVDMRFVKPLDEELVREIAASHDLLVTVEENAIMGGAGGAVGEFLAREN 585

Query: 666 LLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAAT---ALSLLGR 712
           +L S +    + LPD Y+EHA P Q LA  GL    I A+    L LL R
Sbjct: 586 ILKSMLH---LGLPDIYVEHAKPAQMLAECGLDEAGIEASIRERLQLLNR 632


>gi|423097573|ref|ZP_17085369.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fluorescens
           Q2-87]
 gi|397886218|gb|EJL02701.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fluorescens
           Q2-87]
          Length = 632

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 278/650 (42%), Positives = 379/650 (58%), Gaps = 40/650 (6%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           ++  TP+LD    P  L+ L   EL+ LA E+R EL   V +T     + L  +ELT+AL
Sbjct: 11  NRPTTPLLDRANTPDGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIELTIAL 70

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H+VF  P D+++WDVG Q Y HKILTGRR  + TLR+K G++ +  RSESEYD F  GH 
Sbjct: 71  HYVFDTPDDRLVWDVGHQAYPHKILTGRREQMGTLRQKGGVAAFPRRSESEYDTFGVGHS 130

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA LGMA+A  ++      + VI +G   AG A+EA+++A  +D+NM+VILND+  
Sbjct: 131 STSISAALGMAIAARLQNSERKAIAVIGDGALTAGMAFEALNHAPEVDANMLVILNDNDM 190

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+          ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+
Sbjct: 191 SI--------SRNVGGLSNYLAKILSSRTYASMREGSKKVLSRL-PGAWEIARRTEEYAK 241

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---R 371
           GM+ P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +HVVT++ +    
Sbjct: 242 GMLVP--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDL--KGPQFLHVVTKKGKGFAP 297

Query: 372 AE-DTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
           AE D     AI K  E      S P       Y   F + L   A  D  +V +   M+ 
Sbjct: 298 AEVDPIGYHAITK-LEPLDAPASAPKKAGGPKYSGVFGQWLCDMAAADPRLVGITPAMKE 356

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L  F E++P+RYFDV +AEQHAVT +AG+AC G KP   I S FLQR YDQ+++DV 
Sbjct: 357 GSDLVAFSERYPQRYFDVAIAEQHAVTLAAGMACEGAKPVVAIYSTFLQRGYDQLIHDVA 416

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q L V F I  AGLVG DGPT  G+FD++F+ C+P M+VM PSDE+EL  M+ T   + 
Sbjct: 417 VQNLDVLFAIDRAGLVGEDGPTHAGSFDLSFLRCIPGMLVMTPSDENELRKML-TTGHLF 475

Query: 551 DRPVCFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
           + P   RYPRG    A +  DL      PIEIGKG +  +GK  ALL +G  +   LK  
Sbjct: 476 NGPAAVRYPRGTGPNATIEPDLE-----PIEIGKGVIRRQGKQTALLVFGVQLAEALKVA 530

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG 665
             L     D TV D RF KPLD  L+R +   H  L+T+EE +I GG G+ VS F+A + 
Sbjct: 531 ETL-----DATVVDMRFVKPLDEALLRGMADGHELLVTIEENAIMGGAGAAVSEFLAREN 585

Query: 666 LLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATA---LSLLGR 712
           +L S +    + LPD Y+EHA P Q LA  GL    I A     L +LGR
Sbjct: 586 ILKSVLH---LGLPDIYVEHAKPAQMLAECGLDEAGIEAAVRQRLQVLGR 632


>gi|217970188|ref|YP_002355422.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thauera sp. MZ1T]
 gi|217507515|gb|ACK54526.1| deoxyxylulose-5-phosphate synthase [Thauera sp. MZ1T]
          Length = 622

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 278/631 (44%), Positives = 375/631 (59%), Gaps = 41/631 (6%)

Query: 78  PTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHV 137
           P P L+ V  P  +++L  +EL  LA E+R+ L   VSKT   L S+L  VELT+ALHHV
Sbjct: 3   PYPNLERVGCPADVRALDRRELGALASELRAFLIESVSKTGGHLSSNLGTVELTIALHHV 62

Query: 138 FHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNS 197
           F+ P D+I+WDVG QTY HK+LTGRR  +  LR   GISG+  R ESEYD F   H   S
Sbjct: 63  FNTPHDRIVWDVGHQTYGHKVLTGRREAMTGLRHFGGISGFPRRCESEYDTFGTAHSSTS 122

Query: 198 VSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDS-NMIVILNDSRHSL 256
           +SA LGMAVA   +G+    + VI +G   AG A+EA++NAG +++ N++VILND+  S+
Sbjct: 123 ISAALGMAVAARARGEDRHAIAVIGDGAMSAGMAFEALNNAGDMENLNLLVILNDNEMSI 182

Query: 257 HPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGM 316
            P         + AL+  L+R+ S  ++   R V + +   +   + E A KV+EYA+GM
Sbjct: 183 SPP--------VGALTKILARMMSGSTYNTARRVGEKVLG-VAPPVAELARKVEEYAKGM 233

Query: 317 IGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQ 376
           IGP   TLFEE G +Y GP+DGH+++ LI  LQ +  L   GP  +HV+T   R+ +  +
Sbjct: 234 IGP--GTLFEEFGFHYYGPIDGHDLDALIPTLQNLRKL--KGPQFLHVIT---RKGQGYK 286

Query: 377 KSEAIEKQQEGASDSNSLPF-----GNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMD 431
            +EA      G S  +         G    TY   F + L   A+ D  IV +   M   
Sbjct: 287 LAEADPVLYHGVSKFDHTAGIQTGKGGGKLTYTQVFGDWLCDMAKADPRIVGITPAMREG 346

Query: 432 LSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQ 491
             L  F ++FPERYFDVG+AEQHAVTF+AGLAC G  P   I S FLQRAYDQ+++DV  
Sbjct: 347 SGLVRFAQEFPERYFDVGIAEQHAVTFAAGLACEGFVPVVAIYSTFLQRAYDQLIHDVAL 406

Query: 492 QRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDD 551
           Q LPV F I   GLVG+DG T  GAFD++F+SC+PNM+VMAPSDEDE   M+ T A    
Sbjct: 407 QNLPVVFAIDRGGLVGADGATHHGAFDLSFLSCVPNMVVMAPSDEDECRQMLYT-AVQHA 465

Query: 552 RPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSK 611
            P   RYPRG    T  P  +   + IGKG+V+  G+ +ALL +G+++     AR +   
Sbjct: 466 GPSAVRYPRGGGNGT-APRAQMRALPIGKGEVVRRGRGIALLAFGSLLG---VAREVAET 521

Query: 612 LGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-IGGFGSHVSHFIALDGLLDSG 670
           L  D TVA+ RF KPLD++LV EL  +H  ++T+EE + IGG G+ VS  +        G
Sbjct: 522 L--DATVANMRFVKPLDVELVAELATSHDLIVTLEENAVIGGAGAEVSRLV-------DG 572

Query: 671 VKWRPIV----LPDNYIEHASPTQQLALAGL 697
           +  RP V    LPD++I+H    Q LA  GL
Sbjct: 573 LATRPRVLRLGLPDHFIDHGDQAQLLASVGL 603


>gi|398852080|ref|ZP_10608749.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM80]
 gi|398244956|gb|EJN30488.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM80]
          Length = 632

 Score =  469 bits (1208), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 280/650 (43%), Positives = 383/650 (58%), Gaps = 41/650 (6%)

Query: 76  KEPT-PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           K PT P+LD    P  L+ L   EL+ LA E+R EL   V +T     + L  +ELT+AL
Sbjct: 11  KRPTTPLLDRANTPDGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIELTIAL 70

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H+VF  P D+++WDVG Q Y HKILTGRR  + +LR+KDGI+ +  R+ESEYD F  GH 
Sbjct: 71  HYVFDTPDDRLVWDVGHQAYPHKILTGRRERMESLRQKDGIAAFPRRAESEYDTFGVGHS 130

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA LGMA+A  ++      + VI +G   AG A+EA+++A  +++NM+VILND+  
Sbjct: 131 STSISAALGMAIAARLQNSDRKAIAVIGDGALTAGMAFEALNHAPEVNANMLVILNDNDM 190

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+          ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+
Sbjct: 191 SI--------SRNVGGLSNYLAKILSSRTYASMREGSKKVLSRL-PGAWEIARRTEEYAK 241

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---R 371
           GM+ P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +H+VT++ +    
Sbjct: 242 GMLVP--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDL--KGPQFLHIVTKKGKGFAP 297

Query: 372 AE-DTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
           AE D     AI K     + + +    +  + Y   F E L   A  D  +V +   M+ 
Sbjct: 298 AEVDPIGYHAITKLDPLDAPAAAPKPASGPK-YSAVFGEWLCDMAAADPRLVGITPAMKE 356

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L  F E+FP RYFDV +AEQHAVTF+AG+AC G KP   I S FLQR YDQ+V+DV 
Sbjct: 357 GSDLVAFSERFPLRYFDVAIAEQHAVTFAAGMACEGAKPVVAIYSTFLQRGYDQLVHDVA 416

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q L V F I  AGLVG DGPT  G+FD++++ C+P M++M PSDE+EL  M+ T   + 
Sbjct: 417 VQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMVIMTPSDENELRKML-TTGHLY 475

Query: 551 DRPVCFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
           + P   RYPRG    A +  DL      PIEIGKG V  +G  VALL +G  +   LK  
Sbjct: 476 NGPAAVRYPRGSGPNATIEKDLE-----PIEIGKGIVRRQGSKVALLVFGVQLAEALKVA 530

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG 665
             L     D TV D RF KPLD  LVRE+  +H  L+T+EE +I GG G  VS F+A + 
Sbjct: 531 ETL-----DATVVDMRFVKPLDEALVREIAGSHELLVTIEENAIMGGAGGAVSEFLAREN 585

Query: 666 LLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAAT---ALSLLGR 712
           +L S +    + LPD Y+EHA P Q LA  GL    I A+    L LL R
Sbjct: 586 ILKSMLH---LGLPDIYVEHAKPAQMLAECGLDEAGIEASIRQRLELLNR 632


>gi|443468786|ref|ZP_21058993.1| 1-deoxy-D-xylulose 5-phosphate synthase [Pseudomonas
           pseudoalcaligenes KF707]
 gi|442898005|gb|ELS24822.1| 1-deoxy-D-xylulose 5-phosphate synthase [Pseudomonas
           pseudoalcaligenes KF707]
          Length = 631

 Score =  469 bits (1208), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 277/649 (42%), Positives = 385/649 (59%), Gaps = 43/649 (6%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD    P +L+ L   EL  LA E+R  L   V KT     + L  VELT+ALH+V+
Sbjct: 15  TPLLDRATTPDQLRRLGEAELDTLADELRQYLLYTVGKTGGHFGAGLGVVELTIALHYVY 74

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR  + TLR+KDG++ +  R+ESEYD F  GH   S+
Sbjct: 75  DTPDDRLVWDVGHQAYPHKILTGRREQMATLRQKDGVAAFPRRAESEYDTFGVGHSSTSI 134

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LGMA+A  ++G     + VI +G   AG A+EA+++A  + ++M+VILND+  S+  
Sbjct: 135 SAALGMAIAARMQGSERKSIAVIGDGALTAGMAFEALNHASDVQADMLVILNDNDMSI-- 192

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                   ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+GM+ 
Sbjct: 193 ------SRNVGGLSNYLAKILSSRTYASMREGSKKVLSRL-PGAWEIARRTEEYAKGMLV 245

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR----RAED 374
           P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +HVVT++ +       D
Sbjct: 246 P--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDL--KGPQFLHVVTKKGKGFAPAEAD 301

Query: 375 TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
                AI K +     + + P       Y + F + L   A +D  +V +   M+    L
Sbjct: 302 PIGYHAITKLE--PIKAPATPKKPSGPKYSNVFGQWLCDMAGQDPRLVGITPAMKEGSDL 359

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F E+FP+RYFDV +AEQHAVT +AG+AC G KP   I S FLQRAYDQ+++DV  Q L
Sbjct: 360 VAFAERFPDRYFDVAIAEQHAVTLAAGMACDGAKPVVAIYSTFLQRAYDQLIHDVAVQNL 419

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
            V F I  AGLVG DGPT  G+FD++++ C+P M+VM PSDE+EL  ++ T     + P 
Sbjct: 420 DVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDENEL-RLLLTTGHHFEGPA 478

Query: 555 CFRYPRGAIVRTDL-PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
             RYPRG+   + + P  +   +EIGKG V  +G  VALL +G  +     A AL    G
Sbjct: 479 AVRYPRGSGPNSPIDPELK--TVEIGKGVVRRQGSKVALLVFGVQL-----AEALQVADG 531

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVK 672
           +D TV D RF KPLD  LVREL  +H  L+TVEE S+ GG G+ VS F+A + LL     
Sbjct: 532 LDATVVDMRFVKPLDEALVRELAGSHELLVTVEENSVMGGAGAAVSEFLARENLL----- 586

Query: 673 WRPIV---LPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALL 718
            +PI+   LPD Y+EHA P + LA  GL    + A+      RTR ALL
Sbjct: 587 -KPILHLGLPDYYVEHAKPAEMLAECGLDAAGVEASV-----RTRMALL 629


>gi|395760865|ref|ZP_10441534.1| 1-deoxy-D-xylulose-5-phosphate synthase [Janthinobacterium lividum
           PAMC 25724]
          Length = 622

 Score =  469 bits (1208), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 281/652 (43%), Positives = 384/652 (58%), Gaps = 51/652 (7%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L+ +  P +++ L   +L  LA ++RS L   VSKT   L S+L  VELTVALH+VF+ 
Sbjct: 3   LLETINEPAQVRKLARSQLVPLAQQLRSFLLDSVSKTGGHLSSNLGTVELTVALHYVFNT 62

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+I+WDVG QTY+HKILTGRR  +HTLR+KDGISG+  R ESEYD F   H   S+SA
Sbjct: 63  PHDRIVWDVGHQTYSHKILTGRRERMHTLRQKDGISGFPKRDESEYDTFGTAHSSTSISA 122

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPK 259
            LGMA A  IKG     + VI +G+  AG A+EAM+NAG   D N++VILND+  S+ P 
Sbjct: 123 ALGMAQAAKIKGDPLHAIAVIGDGSMTAGMAFEAMNNAGVQEDVNLLVILNDNDMSISP- 181

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRG-MHEWAAKVDEYARGMIG 318
                   + AL+  L+R+ S     Q    AK + K +  G + E A + +E+A+GM+ 
Sbjct: 182 -------PVGALNRHLARLMSG----QFYAAAKNVGKSVLPGPVLELAKRFEEHAKGMVV 230

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
           P  +T+FEE G  YIGP+DGH+++ LI  LQ +  L   GP  +HVVT   ++ +  + +
Sbjct: 231 P--ATMFEEFGFNYIGPIDGHDLDSLIPTLQNIKQL--KGPQFLHVVT---KKGQGYKLA 283

Query: 379 EAIEKQQEGASDSNSL----PFGNYSR-TYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
           EA      G    N      P    ++ TY + F   L   A  DK +V +   M     
Sbjct: 284 EAQPILYHGTGKFNPAEGIKPATAPAKMTYTEVFGNWLCDMATHDKRLVGITPAMREGSG 343

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           +  F+++FP RYFDVG+AEQH+VTF AGLAC GLKP   I S FLQRAYDQ+++DV  Q 
Sbjct: 344 MVKFEQQFPNRYFDVGIAEQHSVTFGAGLACEGLKPVVAIYSTFLQRAYDQLIHDVALQN 403

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           L V F +  AGLVG+DG T  G +D+ F+ C+PNM+VMA SDE+E   M+ T       P
Sbjct: 404 LDVTFALDRAGLVGADGATHAGNYDMAFLRCIPNMVVMAASDENECRQMLTTGYHYPG-P 462

Query: 554 VCFRYPRGAIVRTDLPGYRGIP----IEIGKGKVLVEGKDVALLGYGAMVQNCLKARALL 609
              RYPRGA       G   +P    IEIGKG++  +GK  A+L +G+MV   + A   L
Sbjct: 463 AAIRYPRGAGA-----GVAIVPELTSIEIGKGEIKRQGKRSAILAFGSMVAPSVAAGEKL 517

Query: 610 SKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLD 668
                D TVA+ RF KPLD+ L+++L   H +L+TVEEG I GG GS V+  +A +G++ 
Sbjct: 518 -----DATVANMRFVKPLDVALLKQLAAEHDYLVTVEEGCIMGGAGSAVAEALAAEGIV- 571

Query: 669 SGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREAL 717
                +PI+   LPD +I+H  P Q L   GL    IAA+     G ++  L
Sbjct: 572 -----KPILMLGLPDVFIDHGDPVQLLKSVGLDAAGIAASIEQRFGASQPRL 618


>gi|398999015|ref|ZP_10701768.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM18]
 gi|398132634|gb|EJM21896.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM18]
          Length = 632

 Score =  469 bits (1207), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 279/632 (44%), Positives = 375/632 (59%), Gaps = 38/632 (6%)

Query: 76  KEPT-PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           K PT P+LD    P  L+ L   EL+ LA E+R EL   V +T     + L  +ELT+AL
Sbjct: 11  KRPTTPLLDRANTPDGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIELTIAL 70

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H+VF  P D+++WDVG Q Y HKILTGRR+ + TLR+KDGI+ +  R+ESEYD F  GH 
Sbjct: 71  HYVFDTPDDRLVWDVGHQAYPHKILTGRRARMSTLRQKDGIAAFPRRAESEYDTFGVGHS 130

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA LGMA+A  ++      + VI +G   AG A+EA+++A  +D+NM+VILND+  
Sbjct: 131 STSISAALGMAIAARLQHSDRKAIAVIGDGALTAGMAFEALNHAPEVDANMLVILNDNDM 190

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+          ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+
Sbjct: 191 SI--------SRNVGGLSNYLAKILSSRTYASMREGSKKVLSRL-PGAWEIARRTEEYAK 241

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---R 371
           GM+ P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +HVVT++ +    
Sbjct: 242 GMLVP--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDL--KGPQFLHVVTKKGKGFAP 297

Query: 372 AE-DTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
           AE D     AI K  E      + P       Y   F E L   A  D  +V +   M+ 
Sbjct: 298 AEVDPIGYHAITK-LEPLDAPAAAPKKASGPKYSGVFGEWLCDMAAADPRLVGITPAMKE 356

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L  F E+FP RYFDV +AEQHAVT +AG+AC G KP   I S FLQR YDQ+++DV 
Sbjct: 357 GSDLVAFSERFPTRYFDVAIAEQHAVTLAAGMACEGAKPVVAIYSTFLQRGYDQLIHDVA 416

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q L V F I  AGLVG DGPT  G+FD++F+ C+P M+VM PSDE+EL  M++T   + 
Sbjct: 417 VQNLDVLFAIDRAGLVGEDGPTHAGSFDLSFLRCIPGMLVMTPSDENELRKMLST-GHLY 475

Query: 551 DRPVCFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
           + P   RYPRG    A +  DL      PIEIGKG V  +G  VALL +G  +   LK  
Sbjct: 476 NGPAAVRYPRGTGPNAPIAKDLE-----PIEIGKGVVRRQGSTVALLVFGVQLAEALKVA 530

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG 665
             L     D TV D RF KPLD  LVRE+  +H  L+T+EE +I GG G  VS F+A + 
Sbjct: 531 EKL-----DATVVDMRFVKPLDEALVREIAGSHELLVTIEENAIMGGAGGAVSEFLAREN 585

Query: 666 LLDSGVKWRPIVLPDNYIEHASPTQQLALAGL 697
           +L S +    + LPD Y+EHA P Q LA  GL
Sbjct: 586 ILKSVLH---LGLPDIYVEHAKPAQMLAECGL 614


>gi|388466845|ref|ZP_10141055.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas synxantha
           BG33R]
 gi|388010425|gb|EIK71612.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas synxantha
           BG33R]
          Length = 632

 Score =  469 bits (1207), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 283/655 (43%), Positives = 384/655 (58%), Gaps = 43/655 (6%)

Query: 76  KEP-TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           K P TP+LD    P  L+ L   EL+ LA E+R EL   V +T     + L  +ELT+AL
Sbjct: 11  KRPSTPLLDRAATPDGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIELTIAL 70

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H+VF  P D+++WDVG Q Y HKILTGRR  + +LR+KDG++ +  RSESEYD F  GH 
Sbjct: 71  HYVFDTPDDRLVWDVGHQAYPHKILTGRRERMGSLRQKDGLAAFPRRSESEYDTFGVGHS 130

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA LGMA+A  ++      + VI +G   AG A+EA+++A  +D+NM+VILND+  
Sbjct: 131 STSISAALGMAIAARLQNSDRKAIAVIGDGALTAGMAFEALNHAPEVDANMLVILNDNDM 190

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+          ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+
Sbjct: 191 SI--------SRNVGGLSNYLAKILSSRTYASMREGSKKVLSRL-PGAWEIARRTEEYAK 241

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---R 371
           GM+ P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +H+VT++ +    
Sbjct: 242 GMLVP--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDL--KGPQFLHIVTKKGKGFAP 297

Query: 372 AE-DTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
           AE D     AI K  E      + P       Y   F E L   A  D  +V +   M+ 
Sbjct: 298 AEVDPIGYHAITK-LEPLDAPAAAPKKASGPKYSGVFGEWLCDMAAADPRLVGITPAMKE 356

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L  F E+FP RYFDV +AEQHAVTF+AG+AC G KP   I S FLQR YDQ+V+DV 
Sbjct: 357 GSDLVAFSERFPLRYFDVAIAEQHAVTFAAGMACEGAKPVVAIYSTFLQRGYDQLVHDVA 416

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q L V F I  AGLVG DGPT  G+FD++++ C+P ++VM PSDE+EL  M++T   + 
Sbjct: 417 VQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGILVMTPSDENELRKMLST-GHLY 475

Query: 551 DRPVCFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
           + P   RYPRG    A++  DL      PIEIGKG V  +G   A L +G  +   LK  
Sbjct: 476 NGPAAVRYPRGNGPNAVIEKDLE-----PIEIGKGVVRRQGSKTAFLVFGVQLAEALKVA 530

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG 665
             L     D TV D RF KPLD  LVRE+  +H  L+TVEE +I GG G+ VS F+A + 
Sbjct: 531 EKL-----DATVVDMRFVKPLDEALVREIAASHELLVTVEENAIMGGAGAAVSEFLAREN 585

Query: 666 LLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLLM 720
           +L S +    + LPD Y+EHA P Q LA  GL    I A+      R R ALL +
Sbjct: 586 ILKSVLH---LGLPDVYVEHAKPAQMLAECGLDEAGIEASV-----RERLALLAL 632


>gi|398925618|ref|ZP_10661992.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM48]
 gi|398171979|gb|EJM59867.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM48]
          Length = 632

 Score =  469 bits (1207), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 281/640 (43%), Positives = 376/640 (58%), Gaps = 38/640 (5%)

Query: 76  KEPT-PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           K PT P+LD    P  L+ L   EL+ LA E+R EL   V +T     + L  +ELT+AL
Sbjct: 11  KRPTTPLLDRANTPDGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIELTIAL 70

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H+VF  P D+++WDVG Q Y HKILTGRR  + TLR+KDG++ +  RSESEYD F  GH 
Sbjct: 71  HYVFDTPDDRLVWDVGHQAYPHKILTGRRERMGTLRQKDGVAAFPRRSESEYDTFGVGHS 130

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA LGMA+A  ++      + VI +G   AG A+EA+++A  +D+NM+VILND+  
Sbjct: 131 STSISAALGMAIAARLQNSDRKAIAVIGDGALTAGMAFEALNHAPEVDANMLVILNDNDM 190

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+          ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+
Sbjct: 191 SI--------SRNVGGLSNYLAKILSSRTYASMREGSKKVLSRL-PGAWEIARRTEEYAK 241

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---R 371
           GM+ P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +H+VT++ +    
Sbjct: 242 GMLVP--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDL--KGPQFLHIVTKKGKGFAP 297

Query: 372 AE-DTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
           AE D     AI K  E      + P       Y   F E L   A  D  +V +   M+ 
Sbjct: 298 AEVDPIGYHAITK-LEPLDAPAAAPKKASGPKYSGVFGEWLCDMAAADPRLVGITPAMKE 356

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L  F E+FP RYFDV +AEQHAVT +AG+AC G KP   I S FLQR YDQ+V+DV 
Sbjct: 357 GSDLVAFSERFPLRYFDVAIAEQHAVTLAAGMACEGAKPVVAIYSTFLQRGYDQLVHDVA 416

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q L V F I  AGLVG DGPT  G+FD++F+ C+P M+VM PSDE+EL  M+ T   + 
Sbjct: 417 VQNLDVLFAIDRAGLVGEDGPTHAGSFDLSFLRCIPGMLVMTPSDENELRKML-TTGHLY 475

Query: 551 DRPVCFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
           + P   RYPRG    A +  DL      PIEIGKG +  +G  VALL +G  +   LK  
Sbjct: 476 EGPAAVRYPRGNGPNANIEKDLE-----PIEIGKGVIRRQGSKVALLVFGVQLAEALKVA 530

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG 665
             L     D TV D RF KPLD  LVRE+  +H  L+TVEE +I GG G  VS F+A + 
Sbjct: 531 ETL-----DATVVDMRFVKPLDEALVREIAGSHELLVTVEENAIMGGAGGAVSEFLAREN 585

Query: 666 LLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAAT 705
           +L S +    + LPD Y+EHA P Q LA  GL    I A+
Sbjct: 586 ILKSMLH---LGLPDIYVEHAKPAQMLAECGLDEAGIEAS 622


>gi|419955643|ref|ZP_14471768.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas stutzeri TS44]
 gi|387967556|gb|EIK51856.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas stutzeri TS44]
          Length = 632

 Score =  469 bits (1207), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 270/648 (41%), Positives = 380/648 (58%), Gaps = 40/648 (6%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD    P +L+ L   EL +LA E+R +L   V +T     + L  +ELT+ALH+VF
Sbjct: 15  TPVLDRAATPEQLRRLGEAELDELANELRQDLLFSVGQTGGHFGAGLGVIELTIALHYVF 74

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR  + TLR+KDG++ +  RSESEYD F  GH   S+
Sbjct: 75  DTPDDRLVWDVGHQAYPHKILTGRRQRMSTLRQKDGLAAFPRRSESEYDTFGVGHSSTSI 134

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
            A LGMA+A  +KG++   + VI +G   AG A+EA+++A  + +NM+V+LND+  S+  
Sbjct: 135 GAALGMAIAARLKGEKRKAIAVIGDGALTAGMAFEALNHAPEVGANMLVVLNDNDMSI-- 192

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                   ++  +S+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+GM+ 
Sbjct: 193 ------SRNVGGMSNYLAKILSSRTYASMREGSKKVLSRL-PGAWEIARRTEEYAKGMLV 245

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR----RAED 374
           P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +HVVT++ +       D
Sbjct: 246 P--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLD--GPQFLHVVTKKGKGFAPAEAD 301

Query: 375 TQKSEAIEKQQE-GASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
                AI K +  GA      P G     Y + F + L   A  D  +  +   M+    
Sbjct: 302 PITWHAISKLEPVGAPAKPKQPSGP---KYSNVFGQWLCDMAAADPRLTGITPAMKEGSD 358

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L  F E++P+RYFDV +AEQHAVT +AG+AC G+KP   I S FLQRAYDQ+++DV  Q 
Sbjct: 359 LVAFSERYPDRYFDVAIAEQHAVTLAAGMACEGMKPVVAIYSTFLQRAYDQLIHDVAVQN 418

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           L V F I  AGLVG DGPT  G+FD++++ C+P M+VM PSDE+E+  M+ T   + + P
Sbjct: 419 LDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDENEMRRML-TTGYLFEGP 477

Query: 554 VCFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALL 609
              RYPRG    A +   L      P+EIGKG V  +GK  ALL +G  +   L+    L
Sbjct: 478 AAVRYPRGSGPNATIEAGLE-----PLEIGKGVVRRQGKRAALLVFGVQLPEALQVGEAL 532

Query: 610 SKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLD 668
                D TV D RF KPLD  L+R L   H  L+TVEE SI GG GS V+ F+A + ++ 
Sbjct: 533 -----DATVVDMRFVKPLDEALLRRLAAEHALLVTVEENSIMGGAGSAVAEFLAAEAVV- 586

Query: 669 SGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREA 716
             +    + LPD+Y+EHA P++ LA  GL    I A     L    EA
Sbjct: 587 --MPLLHLGLPDSYVEHAKPSEMLAECGLDAAGIEAAVRQRLAALGEA 632


>gi|421152011|ref|ZP_15611603.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           ATCC 14886]
 gi|404526143|gb|EKA36375.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           ATCC 14886]
          Length = 627

 Score =  469 bits (1207), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 270/632 (42%), Positives = 377/632 (59%), Gaps = 40/632 (6%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           ++  TP+LD   +P  L+ L   +L+ LA E+R  L   V +T     + L  VELT+AL
Sbjct: 11  ERPATPLLDRASSPAELRRLGEADLETLADELRQYLLYTVGQTGGHFGAGLGVVELTIAL 70

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H+VF  P D+++WDVG Q Y HKILT RR L+ TLR+K+G++ +  R+ESEYD F  GH 
Sbjct: 71  HYVFDTPDDRLVWDVGHQAYPHKILTERRELMGTLRQKNGLAAFPRRAESEYDTFGVGHS 130

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA LGMA+A  ++GK    V VI +G   AG A+EA+++A   D++M+VILND+  
Sbjct: 131 STSISAALGMAIAARLQGKERKSVAVIGDGALTAGMAFEALNHASEGDADMLVILNDNDM 190

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+          ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+
Sbjct: 191 SI--------SHNVGGLSNYLAKILSSRTYSSMREGSKKVLSRL-PGAWEIARRTEEYAK 241

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---R 371
           GM+ P   TLFEELG  YIGP+DGH++  L++ L+ +  +   GP  +HVVT++ +    
Sbjct: 242 GMLVP--GTLFEELGWNYIGPIDGHDLPTLVATLRNMRDM--KGPQFLHVVTKKGKGFAP 297

Query: 372 AE-DTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
           AE D     AI K +       S P       Y   F + L   A +D  ++ +   M+ 
Sbjct: 298 AELDPIGYHAITKLEA----PGSAPKKTGGPKYSSVFGQWLCDMAAQDARLLGITPAMKE 353

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L  F E++PERYFDV +AEQHAVT +AG+AC G+KP   I S FLQRAYDQ+++DV 
Sbjct: 354 GSDLVAFSERYPERYFDVAIAEQHAVTLAAGMACEGMKPVVAIYSTFLQRAYDQLIHDVA 413

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q L V F I  AGLVG DGPT  G+FDI+++ C+P M+VM PSDEDEL  ++ T   + 
Sbjct: 414 VQHLDVLFAIDRAGLVGEDGPTHAGSFDISYLRCIPGMLVMTPSDEDELRKLL-TTGYLF 472

Query: 551 DRPVCFRYPRGA----IVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
           D P   RYPRG+     +  DL      P+EIGKG V   G  +ALL +G  +   +K  
Sbjct: 473 DGPAAVRYPRGSGPNHPIDPDLQ-----PVEIGKGVVRRRGGRIALLVFGVQLAEAMKVA 527

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG 665
             L     D TV D RF KPLD  LVREL  +H  L+T+EE ++ GG GS V  F+A +G
Sbjct: 528 ESL-----DATVVDMRFVKPLDEALVRELAGSHELLVTIEENAVMGGAGSAVGEFLASEG 582

Query: 666 LLDSGVKWRPIVLPDNYIEHASPTQQLALAGL 697
           L    V    + LPD Y+EHA P++ LA  GL
Sbjct: 583 L---EVPLLQLGLPDYYVEHAKPSEMLAECGL 611


>gi|319788993|ref|YP_004150626.1| deoxyxylulose-5-phosphate synthase [Thermovibrio ammonificans HB-1]
 gi|317113495|gb|ADU95985.1| deoxyxylulose-5-phosphate synthase [Thermovibrio ammonificans HB-1]
          Length = 617

 Score =  469 bits (1207), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 278/640 (43%), Positives = 385/640 (60%), Gaps = 37/640 (5%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           ILD V +P  LK LT +ELKQLA E+R  + S+V KT   L SSL  VELT+AL  VF  
Sbjct: 2   ILDKVNSPDDLKKLTTQELKQLASELRDYIISVVEKTGGHLASSLGVVELTIALLKVFSP 61

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+I+WDVG Q+Y +KILT R+    TLR+  GISG+ S  ES YD F  GH   S+SA
Sbjct: 62  PKDEIVWDVGHQSYPYKILTDRKEKFKTLRQFGGISGFPSIKESPYDAFGTGHSSTSISA 121

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKI 260
            LG+ V + +KG+   ++ VI +G   AG+AYE ++NAG L  ++IVILND+  S+    
Sbjct: 122 ALGIKVGKRLKGEEGHVIAVIGDGALTAGEAYEGLNNAGQLKEDLIVILNDNEMSI---- 177

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRI-GRGMHEWAAKVDEY-ARGMIG 318
                 +I A+S+ L+++ + +S R+ +E  + +TK+I G   ++   +V++   +G+  
Sbjct: 178 ----SKNIGAISNYLTKLTTGESLRRAKERLEEVTKKIFGDTFYKGLKRVEDLIVKGLFP 233

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
           P    LFEELG  Y+GP+DGH+IE L++ L+ V+ +   GP LVHV+T   ++ +  + +
Sbjct: 234 P--GMLFEELGFRYVGPIDGHDIETLVTTLRNVSKM--RGPTLVHVLT---KKGKGHKPA 286

Query: 379 EAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQ 438
           E    +  G S    L       TY + F + LV  AEKD  IV + A M     L  F 
Sbjct: 287 EERPDKFHGVSPKKLLSEPQ-PPTYTEVFSKTLVEMAEKDSSIVAITAAMPSGTGLDRFA 345

Query: 439 EKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRF 498
            +FPERYFDVG+AEQHAVTF+AGLA  GL+P   I S FLQRAYDQ+++DV  Q LPV F
Sbjct: 346 ARFPERYFDVGIAEQHAVTFAAGLAKKGLRPVVAIYSTFLQRAYDQIIHDVALQELPVTF 405

Query: 499 VITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRY 558
            I  AGLVG DG T  GAFD++++  +PN++V AP DE+EL  ++ T A    RP   RY
Sbjct: 406 AIDRAGLVGEDGATHHGAFDLSYLRVVPNLVVAAPKDEEELRHLLYT-AVYSGRPFAVRY 464

Query: 559 PR----GAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGI 614
           PR    G  +R  L   + IP  IG  +VL EG D+ +L  G  V   L+A   LS  GI
Sbjct: 465 PRGRGYGVTLREPL---KKIP--IGSWEVLREGGDLLILATGWTVYQALEAARELSAEGI 519

Query: 615 DVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIAL--DGLLDSGV 671
           + TV +ARF KPLD KL++EL   H+ +ITVEE ++ GGFGS V+ F+AL  +G + +  
Sbjct: 520 EATVVNARFIKPLDEKLLKELALKHSTVITVEENAVKGGFGSAVNEFLALWYNGRVFN-- 577

Query: 672 KWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
               + LPD +IEH S      L  +    I  +   +LG
Sbjct: 578 ----LGLPDKFIEHGSQALLRKLVKIDKDGIKESVREILG 613


>gi|404493292|ref|YP_006717398.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pelobacter carbinolicus
           DSM 2380]
 gi|118595596|sp|Q3A3Z6.1|DXS_PELCD RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|77545349|gb|ABA88911.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pelobacter carbinolicus
           DSM 2380]
          Length = 634

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 275/646 (42%), Positives = 380/646 (58%), Gaps = 35/646 (5%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L  +++P  LK L++KEL+ LA EIR+++   VS+T   L SSL  VELT+ALHHV + 
Sbjct: 3   MLKNLKSPAELKGLSVKELEVLAGEIRTKIIDTVSQTGGHLASSLGVVELTIALHHVLNT 62

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           PVDKI+WDVG Q YAHK+LTGR     TLR+  GISG+  R ES YD F+ GH   S+SA
Sbjct: 63  PVDKIVWDVGHQAYAHKLLTGRLDRFDTLRQLGGISGFPKREESPYDAFDVGHSSTSISA 122

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKI 260
            LGMA ARD K  +E  V VI +G+   G A+EA++ AG  + N+IVILND+        
Sbjct: 123 ALGMAAARDCKNGKEKFVAVIGDGSLTGGMAFEALNQAGDQNKNLIVILNDN-------- 174

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAK---GMTKRIGRGMHEWAAKVDEYARGMI 317
           E S   ++ ALSS ++R  +S+   +L++ A+   G   RIG+ + + A K +E  +G  
Sbjct: 175 EMSISQNVGALSSLINRKMTSELVVRLKKEAENFLGHVPRIGKDLLKVARKAEESLKGFF 234

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQK 377
            P    LFE  G  Y+GP++GH +E LI  L+ VA+L   GPVLVHVVT + +  E  +K
Sbjct: 235 TP--GMLFEAFGFDYVGPLNGHRLETLIPALENVANL--EGPVLVHVVTRKGKGFEPAEK 290

Query: 378 SEAI-------EKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
           + ++       +K+      S   P      ++   F   L   AEKD  IV + A M  
Sbjct: 291 NPSLFHGVGPFDKETGEVRASKGGP-----ASFTGVFGSTLTAMAEKDDRIVAITAAMLE 345

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L+ F +++P R+FDVG+AEQHAVTF+AGLAC G++P   + S FLQRAYD VV+DV 
Sbjct: 346 GTGLKEFSKRYPSRFFDVGIAEQHAVTFAAGLACQGMRPVVALYSTFLQRAYDNVVHDVA 405

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            QRLPV F I   GLVG+DGPT  G FD +F+  +PNM+V+AP DE EL   + T  +  
Sbjct: 406 LQRLPVTFAIDRGGLVGADGPTHHGVFDYSFLRHIPNMVVIAPRDEIELQRAMLT-GTQH 464

Query: 551 DRPVCFRYPRGAIVRTDLP-GYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALL 609
           D P+ +RYPRG  +  +LP     +P  IGKG+ L +G D  +   G + +  L A  +L
Sbjct: 465 DGPLAYRYPRGKALGLELPDSVESMP--IGKGEKLRDGSDAVIFALGVVCKEALVASDIL 522

Query: 610 SKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEG-SIGGFGSHVSHFIALDGLLD 668
           +  G+ V V D RF KPLD +L+    +    ++TVEE    GGFGS V   +A +GL  
Sbjct: 523 AGEGLSVAVVDPRFLKPLDQQLLIAEARRTGVVVTVEENVRQGGFGSAVLEMLADEGL-- 580

Query: 669 SGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTR 714
             V+   I LPD +IE  +  Q  A  GL    IAA+  + +   R
Sbjct: 581 -AVRVLRIGLPDRFIEQGTQQQLYARYGLDAEGIAASVRNFMHHDR 625


>gi|398837496|ref|ZP_10594789.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM102]
 gi|398118788|gb|EJM08514.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM102]
          Length = 632

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 280/632 (44%), Positives = 376/632 (59%), Gaps = 38/632 (6%)

Query: 76  KEPT-PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           K PT P+LD    P  L+ L   EL+ LA E+R EL   V +T     + L  +ELT+AL
Sbjct: 11  KRPTTPLLDRANTPDGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIELTIAL 70

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H+VF  P D+++WDVG Q Y HKILTGRR  + TLR+KDG++ +  RSESEYD F  GH 
Sbjct: 71  HYVFDTPDDRLVWDVGHQAYPHKILTGRRERMGTLRQKDGVAAFPRRSESEYDTFGVGHS 130

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA LGMA+A  ++      + VI +G   AG A+EA+++A  +++NM+VILND+  
Sbjct: 131 STSISAALGMAIAARLQHSDRKAIAVIGDGALTAGMAFEALNHAPEVNANMLVILNDNDM 190

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+          ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+
Sbjct: 191 SI--------SRNVGGLSNYLAKILSSRTYASMREGSKKVLSRL-PGAWEIARRTEEYAK 241

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---R 371
           GM+ P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +HVVT++ +    
Sbjct: 242 GMLVP--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDL--KGPQFLHVVTKKGKGFAP 297

Query: 372 AE-DTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
           AE D     AI K  E      + P       Y   F E L   A  D  +V +   M+ 
Sbjct: 298 AEVDPIGYHAITK-LEPVDAPAAAPKKAGGPKYSGVFGEWLCDMAAVDPRLVGITPAMKE 356

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L  F E+FP+RYFDV +AEQHAVT +AG+AC G KP   I S FLQRAYDQ+V+DV 
Sbjct: 357 GSDLVAFSERFPKRYFDVAIAEQHAVTLAAGMACEGAKPVVAIYSTFLQRAYDQLVHDVA 416

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q L V F I  AGLVG DGPT  G+FD++F+ C+P M++M PSDE+EL  M++T   + 
Sbjct: 417 VQNLDVLFAIDRAGLVGEDGPTHAGSFDLSFLRCIPGMLLMTPSDENELRKMLST-GHLY 475

Query: 551 DRPVCFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
           + P   RYPRG    A +  DL      PIEIGKG V  +G  VALL +G  +   LK  
Sbjct: 476 NGPAAVRYPRGTGPNAPITKDLE-----PIEIGKGVVRRQGGKVALLVFGVQLAEALKVA 530

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG 665
             L     D TV D RF KPLD  LVRE+  +H  L+TVEE +I GG G  VS F+A + 
Sbjct: 531 EKL-----DATVIDMRFVKPLDEALVREIAGSHELLVTVEENAIMGGAGGAVSEFLAREN 585

Query: 666 LLDSGVKWRPIVLPDNYIEHASPTQQLALAGL 697
           +L S +    + LPD Y+EHA P Q LA  GL
Sbjct: 586 ILKSVLH---LGLPDIYVEHAKPAQMLAECGL 614


>gi|289672639|ref|ZP_06493529.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           syringae FF5]
 gi|424065782|ref|ZP_17803256.1| deoxyxylulose-5-phosphate synthase [Pseudomonas syringae pv.
           avellanae str. ISPaVe013]
 gi|440720698|ref|ZP_20901110.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae
           BRIP34876]
 gi|440727847|ref|ZP_20908073.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae
           BRIP34881]
 gi|443641334|ref|ZP_21125184.1| 1-deoxy-D-xylulose 5-phosphate synthase [Pseudomonas syringae pv.
           syringae B64]
 gi|408002991|gb|EKG43210.1| deoxyxylulose-5-phosphate synthase [Pseudomonas syringae pv.
           avellanae str. ISPaVe013]
 gi|440363252|gb|ELQ00422.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae
           BRIP34881]
 gi|440365068|gb|ELQ02182.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae
           BRIP34876]
 gi|443281351|gb|ELS40356.1| 1-deoxy-D-xylulose 5-phosphate synthase [Pseudomonas syringae pv.
           syringae B64]
          Length = 630

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 273/649 (42%), Positives = 383/649 (59%), Gaps = 49/649 (7%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD  + P  L+ L   EL+ LA E+R EL   V +T     + L  +ELT+ALH+VF
Sbjct: 15  TPLLDRADTPHGLRRLGEAELETLADELRLELLYSVGQTGGHFGAGLGVIELTIALHYVF 74

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR+ + TLR+KDG++ +  RSESEYD F  GH   S+
Sbjct: 75  DTPDDRLVWDVGHQAYPHKILTGRRARMSTLRQKDGVAAFPRRSESEYDTFGVGHSSTSI 134

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LGMA+A  ++G     + VI +G   AG A+EA+++A  + ++M+VILND+  S+  
Sbjct: 135 SAALGMAIASRLQGSERKSIAVIGDGALTAGMAFEALNHAPEVAADMLVILNDNDMSI-- 192

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                   ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+GM+ 
Sbjct: 193 ------SRNVGGLSNYLAKILSSRTYSSMREGSKKVLSRL-PGAWEIARRTEEYAKGMLV 245

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAE----D 374
           P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +HVVT++ +  E    D
Sbjct: 246 P--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDL--KGPQFLHVVTKKGKGFEPAEVD 301

Query: 375 TQKSEAIEKQQ----EGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
                AI K +      A    S P       Y   F + +   A+ D  +V +   M+ 
Sbjct: 302 PIGYHAITKLEPLNAPAAQKKISAP------KYSGVFGQWICDMADADARLVGITPAMKE 355

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L  F E+FPERYFDV +AEQHAVT +AG+AC G KP   I S FLQR YDQ+++DV 
Sbjct: 356 GSDLVAFSERFPERYFDVAIAEQHAVTLAAGMACEGSKPVVAIYSTFLQRGYDQLIHDVA 415

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q L V F I  AGLVG DGPT  G+FD++++ C+P M+VM PSDE+EL  +++T   + 
Sbjct: 416 VQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDENELRKLLST-GYLH 474

Query: 551 DRPVCFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
             P   RYPRG    A++  +L      P+EIGKG V  +G+ VA+L +G  +     A 
Sbjct: 475 TGPAAVRYPRGTGPNAVIEANLE-----PVEIGKGVVRRQGQGVAILAFGVQL-----AE 524

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG 665
           AL+    +D TV D RF KPLD  LV E   NH  L+T+EE ++ GG G+ VS F+A   
Sbjct: 525 ALVVAEKLDATVIDMRFVKPLDEALVSEAAANHELLVTLEENAVMGGAGAAVSEFLARAN 584

Query: 666 LLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAAT---ALSLLG 711
           +L S +    + LPD Y+EHA P Q L   GL    I A     L+L+G
Sbjct: 585 ILKSVLH---LGLPDVYVEHAKPAQMLTECGLDAQGIEAAINERLALIG 630


>gi|253998308|ref|YP_003050371.1| deoxyxylulose-5-phosphate synthase [Methylovorus glucosetrophus
           SIP3-4]
 gi|253984987|gb|ACT49844.1| deoxyxylulose-5-phosphate synthase [Methylovorus glucosetrophus
           SIP3-4]
          Length = 613

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 265/640 (41%), Positives = 386/640 (60%), Gaps = 49/640 (7%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+LD +++P +L+ L  K+L +LA E+R+ +   V++T   L S+L  VELT+ALH+VF+
Sbjct: 3   PLLDTIQSPEQLRLLDRKQLPELAQELRTFVIDSVARTGGHLSSNLGVVELTIALHYVFN 62

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG QTY HKILTGRR  +  LR  +GI+G+  R+ES YD F  GH   S+S
Sbjct: 63  TPEDRLVWDVGHQTYPHKILTGRRDGMADLRMPNGIAGFPRRNESPYDTFGTGHSSTSIS 122

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           A LGMA+A   +G     V +I +G   AG A+EA++NAG +D+N++VILND+  S+ P 
Sbjct: 123 AALGMAIAAQQQGSERRAVAIIGDGAMTAGMAFEALNNAGAMDANLLVILNDNDMSISP- 181

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                  ++ AL + L+++ S + +  +R   + +   +   M E+A + +E+ +GM+ P
Sbjct: 182 -------NVGALHNYLAKLLSGRFYASMRRSGEKVLGVV-PPMLEFAKRAEEHVKGMVTP 233

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---RAEDTQ 376
              TLFEE G  YIGP+DGH+IE LI+ L+ +  L   GP  +H+VT++      AED  
Sbjct: 234 --GTLFEEFGFNYIGPIDGHDIETLITTLKNIRKL--KGPQFLHIVTQKGHGYAPAEDNP 289

Query: 377 -KSEAIEK--QQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
            K   + K     G S + S       +TY   F + LV  AE+D+ ++ +   M     
Sbjct: 290 GKYHGVGKFDPSNGCSVATS-----SKKTYTQVFSDWLVDMAEQDERLIGITPAMCDGSG 344

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L  F EKFP+R+FDVG+AEQHA+TF+AG+AC G+KP   I S FLQRAYDQ+++D+  Q 
Sbjct: 345 LNAFAEKFPKRFFDVGIAEQHALTFAAGMACDGMKPVVAIYSTFLQRAYDQLIHDIALQN 404

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPV F I  AGLVG+DGPT  G+FD++FM C+PNM+++ PSDE+E   M+ T A   D P
Sbjct: 405 LPVVFAIDRAGLVGADGPTHAGSFDLSFMRCIPNMLILTPSDENECRQMLYT-AYQHDGP 463

Query: 554 VCFRYPRGA-------IVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
              RYPRG         V T LP        IGKG+V   GK+VA+L +G+M+       
Sbjct: 464 SAVRYPRGGGPGAVIEKVMTALP--------IGKGEVRRHGKNVAILAFGSML-----TP 510

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-IGGFGSHVSHFIALDG 665
           AL++   +D TV + RF KPLD+ L+ EL  +H+ L+TVEE + +GG G+ V   +    
Sbjct: 511 ALVAGEKLDATVVNMRFVKPLDVALIAELAASHSLLVTVEENTLLGGAGAAVMEALQ--- 567

Query: 666 LLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAAT 705
            ++  V    + LPD +I+H      LA  GL    I A+
Sbjct: 568 QINPQVATLSLGLPDTFIDHGVHETMLAECGLNAEGIIAS 607


>gi|28867926|ref|NP_790545.1| deoxyxylulose-5-phosphate synthase [Pseudomonas syringae pv. tomato
           str. DC3000]
 gi|38372166|sp|Q889Q1.1|DXS_PSESM RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|28851162|gb|AAO54240.1| deoxyxylulose-5-phosphate synthase [Pseudomonas syringae pv. tomato
           str. DC3000]
          Length = 631

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 277/645 (42%), Positives = 387/645 (60%), Gaps = 40/645 (6%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD  + P  L+ L   EL+ LA E+R EL   V +T     + L  +ELT+ALH+VF
Sbjct: 15  TPLLDQADTPHGLRRLGEAELETLADELRLELLYSVGQTGGHFGAGLGVIELTIALHYVF 74

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR+ + TLR+KDG++ +  RSESEYD F  GH   S+
Sbjct: 75  DTPDDRLVWDVGHQAYPHKILTGRRARMSTLRQKDGVAAFPRRSESEYDTFGVGHSSTSI 134

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LGMA+A  ++G     + VI +G   AG A+EA+++A  + +NM+VILND+  S+  
Sbjct: 135 SAALGMAIASRLQGSERKSIAVIGDGALTAGMAFEALNHAPEVAANMLVILNDNDMSI-- 192

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                   ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+GM+ 
Sbjct: 193 ------SRNVGGLSNYLAKILSSRTYTSMREGSKKVLSRL-PGAWEIARRTEEYAKGMLV 245

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---RAE-D 374
           P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +HVVT++ +    AE D
Sbjct: 246 P--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDL--KGPQFLHVVTKKGKGFAPAEVD 301

Query: 375 TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
                AI K  E  +   S+     S  Y   F + +   AE D  +V +   M+    L
Sbjct: 302 PIGYHAITK-LEPLNAPVSVQKKVSSPKYSGVFGQWICDMAEADSRLVGITPAMKEGSDL 360

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F E+FPERYFDV +AEQHAVT +AG+AC G KP   I S FLQR YDQ+V+DV  Q L
Sbjct: 361 VDFSERFPERYFDVAIAEQHAVTLAAGMACEGSKPVVAIYSTFLQRGYDQLVHDVAVQNL 420

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
            V F I  AGLVG DGPT  G+FD++++ C+P ++VM PSDE+EL  +++T   +   P 
Sbjct: 421 DVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGIVVMTPSDENELRKLLST-GYLHTGPA 479

Query: 555 CFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLS 610
             RYPRG    A++  +L      P+EIGKG V  +G+ VA+L +G  +     A AL+ 
Sbjct: 480 AVRYPRGTGPNAVIEANLD-----PVEIGKGVVRRQGQGVAILVFGVQL-----AEALVV 529

Query: 611 KLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDS 669
              +D TV D RF KPLD  LVRE   +H  L+T+EE ++ GG G+ VS F+A   +L S
Sbjct: 530 AEKLDATVIDMRFVKPLDEALVRETAASHELLVTLEENAVMGGAGAAVSEFLARANILKS 589

Query: 670 GVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATA---LSLLG 711
            +    + LPD Y+EHA P Q LA  GL    I A     L+L+G
Sbjct: 590 VLH---LGLPDVYVEHAKPAQMLAECGLDAEGIEAAINERLALIG 631


>gi|398983679|ref|ZP_10690143.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM24]
 gi|399012338|ref|ZP_10714662.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM16]
 gi|398115900|gb|EJM05673.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM16]
 gi|398156851|gb|EJM45263.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM24]
          Length = 632

 Score =  467 bits (1202), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 282/653 (43%), Positives = 382/653 (58%), Gaps = 43/653 (6%)

Query: 76  KEPT-PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           K PT P+LD    P  L+ L   EL+ LA E+R EL   V +T     + L  +ELT+AL
Sbjct: 11  KRPTTPLLDRANTPDGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIELTIAL 70

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H+VF  P D+++WDVG Q Y HKILTGRR  + +LR+KDGI+ +  R+ESEYD F  GH 
Sbjct: 71  HYVFDTPDDRLVWDVGHQAYPHKILTGRRERMESLRQKDGIAAFPRRAESEYDTFGVGHS 130

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA LGMA+A  ++      + VI +G   AG A+EA+++A  +++NM+VILND+  
Sbjct: 131 STSISAALGMAIAARLQNSDRKAIAVIGDGALTAGMAFEALNHAPEVNANMLVILNDNDM 190

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+          ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+
Sbjct: 191 SI--------SRNVGGLSNYLAKILSSRTYASMREGSKKVLSRL-PGAWEIARRTEEYAK 241

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---R 371
           GM+ P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +H+VT++ +    
Sbjct: 242 GMLVP--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDL--KGPQFLHIVTKKGKGFAP 297

Query: 372 AE-DTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
           AE D     AI K  E      + P       Y   F E L   A  D  +V +   M+ 
Sbjct: 298 AEVDPIGYHAITK-LEPLDAPAAAPKKASGPKYSAVFGEWLCDMAAVDPRLVGITPAMKE 356

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L  F E+FP RYFDV +AEQHAVTF+AG+AC G KP   I S FLQR YDQ+V+DV 
Sbjct: 357 GSDLVAFSERFPLRYFDVAIAEQHAVTFAAGMACEGAKPVVAIYSTFLQRGYDQLVHDVA 416

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q L V F I  AGLVG DGPT  G+FD++++ C+P M++M PSDE+EL  M+ T   + 
Sbjct: 417 VQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMVIMTPSDENELRKML-TTGHLY 475

Query: 551 DRPVCFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
           + P   RYPRG    A +  DL      PIEIGKG +  +G  VALL +G  +   LK  
Sbjct: 476 NGPAAVRYPRGNGPNATIEKDLD-----PIEIGKGILRRQGSKVALLVFGVQLAEALKVA 530

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG 665
             L     D TV D RF KPLD  LVRE+  +H  L+T+EE +I GG G  VS F+A + 
Sbjct: 531 EKL-----DATVVDMRFVKPLDEALVREIADSHELLVTIEENAIMGGAGGAVSEFLAREN 585

Query: 666 LLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALL 718
           +L S +    + LPD Y+EHA P Q LA  GL    I A+      R R ALL
Sbjct: 586 ILKSMLH---LGLPDIYVEHAKPAQMLAECGLDEAGIEASI-----RERLALL 630


>gi|399006275|ref|ZP_10708802.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM17]
 gi|398122441|gb|EJM12033.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM17]
          Length = 632

 Score =  467 bits (1202), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 283/650 (43%), Positives = 381/650 (58%), Gaps = 44/650 (6%)

Query: 76  KEPT-PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           K PT P+LD    P  L+ L   EL+ LA E+R EL   V +T     + L  +ELT+AL
Sbjct: 11  KRPTTPLLDRANTPDGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIELTIAL 70

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H+VF  P D+++WDVG Q Y HKILTGRR  + +LR+KDG++ +  RSESEYD F  GH 
Sbjct: 71  HYVFDTPDDRLVWDVGHQAYPHKILTGRRERMASLRQKDGLAAFPRRSESEYDTFGVGHS 130

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA LGMA+A  ++      + VI +G   AG A+EA+++A  +D+NM+VILND+  
Sbjct: 131 STSISAALGMAIAARLQNSERKAIAVIGDGALTAGMAFEALNHAPEVDANMLVILNDNDM 190

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+          ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+
Sbjct: 191 SI--------SRNVGGLSNYLAKILSSRTYASMREGSKKVLSRL-PGAWEIARRTEEYAK 241

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---R 371
           GM+ P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +HVVT++ +    
Sbjct: 242 GMLVP--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDL--KGPQFLHVVTKKGKGFAP 297

Query: 372 AE-DTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
           AE D     AI K     S + + P       Y   F E L   A  D  +V +   M+ 
Sbjct: 298 AEVDPIGYHAITKLDPLDSPAAA-PKKAGGPKYSGVFGEWLCDMAAADPRLVGITPAMKE 356

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L  F E+FP RYFDV +AEQHAVT +AG+AC G KP   I S FLQR YDQ+V+DV 
Sbjct: 357 GSDLVAFSERFPLRYFDVAIAEQHAVTLAAGMACEGAKPVVAIYSTFLQRGYDQLVHDVA 416

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q L V F I  AGLVG DGPT  G+FD++F+ C+P M+VM PSDE+EL  M++T   + 
Sbjct: 417 VQNLDVLFAIDRAGLVGEDGPTHAGSFDLSFLRCIPGMLVMTPSDENELRKMLST-GHLY 475

Query: 551 DRPVCFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
           + P   RYPRG    A +  DL      PIEIGKG V  +G  VALL +G  +   LK  
Sbjct: 476 NGPAAVRYPRGTGPNATIEKDLQ-----PIEIGKGVVRRQGSKVALLVFGVQLAEALK-- 528

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG 665
            +  KL  D TV D RF KPLD  LV E+  +H  L+T+EE +I GG G  V  F+A + 
Sbjct: 529 -VADKL--DATVVDMRFVKPLDEALVCEIAASHELLVTIEENAIMGGAGGAVGEFLAREA 585

Query: 666 LLDSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
           +L      +PI+   LPD Y+EHA P Q LA  GL    I A   + L R
Sbjct: 586 IL------KPILHLGLPDLYVEHAKPAQMLAECGLDEAGIEAAVRARLQR 629


>gi|322420928|ref|YP_004200151.1| deoxyxylulose-5-phosphate synthase [Geobacter sp. M18]
 gi|320127315|gb|ADW14875.1| deoxyxylulose-5-phosphate synthase [Geobacter sp. M18]
          Length = 635

 Score =  467 bits (1202), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 274/642 (42%), Positives = 381/642 (59%), Gaps = 36/642 (5%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L  +  P  LK L  +EL  LA E+R  L   V+KT   L S+L  VEL++ALH+ F +
Sbjct: 4   LLSKINGPDDLKKLDAEELVLLADEVRGFLMETVAKTGGHLASNLGVVELSIALHYCFDS 63

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D I+WDVG Q Y HKILTGRR   HT R   GISG+  RSES +D F AGH   S+SA
Sbjct: 64  PKDNIVWDVGHQAYTHKILTGRRDSFHTQRCYKGISGFPKRSESPHDAFGAGHSSTSISA 123

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKI 260
           GLG+AVA  +KG    +++VI +G+   G A EA++ AG+L  NMIV+LND+  S+    
Sbjct: 124 GLGLAVAHTLKGDDARVISVIGDGSLTGGMALEALNQAGHLKKNMIVVLNDNEMSI---- 179

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGM---TKRIGRGMHEWAAKVDEYARGMI 317
                 ++ ALSS +SR  +   +R L++  +G+      IG  +  +A K +   +G +
Sbjct: 180 ----SKNVGALSSFISRKMTGTYYRSLKKEMEGLLAGIPAIGCNILHFAKKAENSLKGFL 235

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRR---AED 374
            P   TLFE LG  Y+GP+ GH+I  LI VL+ V  L   GP+LVHV+T++ +    AE+
Sbjct: 236 TP--GTLFEALGFEYVGPIAGHDIPTLIGVLENVKKL--EGPILVHVMTKKGKGHPPAEN 291

Query: 375 T-QKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
              K   +   +  ++ S   P  +Y+  + D     LV   EKD  I+ + A M     
Sbjct: 292 MPDKFHGVAPTKPASATSAKQPPPSYTSVFGDT----LVKLGEKDPKILAITAAMPDGTG 347

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L  F ++FP+R+FDVG+AEQHA+TF+AGLA  G +P   I S F QRAYDQV +D+  Q+
Sbjct: 348 LTPFADRFPDRFFDVGIAEQHALTFAAGLAAEGFRPVAAIYSTFTQRAYDQVFHDICLQK 407

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPV   +  AGLVG DGPT  GAFDI+++  LP + VMAP DE+EL  M+ T A    RP
Sbjct: 408 LPVTLALDRAGLVGDDGPTHHGAFDISYLRHLPELTVMAPKDENELQHMLKT-AIYHGRP 466

Query: 554 VCFRYPRGA----IVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALL 609
           +  RYPRGA     +  +L       +EIGKG++LVEG D+ L+  G+ V   L+A ALL
Sbjct: 467 ISLRYPRGAGFGVTMEKELKA-----LEIGKGELLVEGSDLTLVAIGSTVYPALEAAALL 521

Query: 610 SKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-IGGFGSHVSHFIALDGLLD 668
            + GI  +V +ARF KPLD +L+         ++TVEE + +GGFGS V   +A  GL  
Sbjct: 522 KQKGIFASVVNARFIKPLDRELILSEASRTGCMVTVEENALLGGFGSAVLEAVADAGL-- 579

Query: 669 SGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
           +GV+ + I +PD++IE  + +Q  A  GL G  IAAT  + L
Sbjct: 580 TGVRMKRIGIPDSFIEQGTQSQLRADLGLDGAGIAATCQAFL 621


>gi|402698240|ref|ZP_10846219.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fragi A22]
          Length = 632

 Score =  467 bits (1202), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 275/664 (41%), Positives = 383/664 (57%), Gaps = 71/664 (10%)

Query: 76  KEPT-PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           K PT P+LD    P  L+ L   EL+ LA E+R EL   V +T     + L  +ELT+AL
Sbjct: 11  KRPTTPLLDRAGTPAGLRRLAEAELEPLADELRQELLYTVGQTGGHFGAGLGVIELTIAL 70

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H+VF  P D+++WDVG Q Y HKILTGRR  + TLR+KDGI+ +  R+ESEYD F  GH 
Sbjct: 71  HYVFDTPDDRLVWDVGHQAYPHKILTGRREQMATLRQKDGIAAFPRRAESEYDTFGVGHS 130

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA LGMA+A  ++      + VI +G   AG A+EA+++A  +D+NM+VILND+  
Sbjct: 131 STSISAALGMAIAARLQNSERKAIAVIGDGALTAGMAFEALNHAPEVDANMLVILNDNDM 190

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+          ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+
Sbjct: 191 SI--------SRNVGGLSNYLAKILSSRTYASMREGSKKVLSRL-PGAWEIARRTEEYAK 241

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAED 374
           GM+ P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +H+VT        
Sbjct: 242 GMLVP--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDL--KGPQFLHIVT-------- 289

Query: 375 TQKSEAIEKQQEGASDSNSLPFGNYSRT-------------------YDDCFIEALVMEA 415
                   K+ +G + + + P G ++ T                   Y   F E L   A
Sbjct: 290 --------KKGKGFAPAEADPIGYHAITKLEPLDAPKAAPKAASGPKYSAVFGEWLCDMA 341

Query: 416 EKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPS 475
             D+ +V +   M+    L  F E+FP RYFDV +AEQHAVTF+AG+AC G KP   I S
Sbjct: 342 AVDQRLVGITPAMKEGSDLIAFSERFPLRYFDVAIAEQHAVTFAAGMACEGAKPVVAIYS 401

Query: 476 AFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSD 535
            FLQR YDQ+V+DV  Q L V F I  AGLVG DGPT  G+FD++++ C+P M++M PSD
Sbjct: 402 TFLQRGYDQLVHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMVIMTPSD 461

Query: 536 EDELVDMVATVASIDDRPVCFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVA 591
           E+EL  M+ T   + + P   RYPRG    A +   L      P+EIGKG +  +G  VA
Sbjct: 462 ENELRKML-TTGHLYNGPAAVRYPRGSGPNASIEKTLE-----PLEIGKGVIRRKGSKVA 515

Query: 592 LLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI- 650
           +L +G  +     A AL     ID TV D RF KP+D  LVRE+  +H  L+T+EE +I 
Sbjct: 516 MLVFGVQL-----AEALQVAEKIDATVVDMRFVKPMDEALVREMADSHELLVTIEENAIM 570

Query: 651 GGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATA---L 707
           GG G+ VS  +A + +L S +    + LPD Y+EHA P+Q LA  GL    I A+    +
Sbjct: 571 GGAGAAVSELLARENVLKSVLH---LGLPDVYVEHAKPSQMLAECGLDAAGIEASVRQRM 627

Query: 708 SLLG 711
            LLG
Sbjct: 628 QLLG 631


>gi|424070487|ref|ZP_17807922.1| deoxyxylulose-5-phosphate synthase [Pseudomonas syringae pv.
           avellanae str. ISPaVe037]
 gi|408000493|gb|EKG40846.1| deoxyxylulose-5-phosphate synthase [Pseudomonas syringae pv.
           avellanae str. ISPaVe037]
          Length = 630

 Score =  467 bits (1201), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 272/649 (41%), Positives = 383/649 (59%), Gaps = 49/649 (7%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD  + P  L+ L   EL+ LA E+R EL   V +T     + L  +ELT+ALH+VF
Sbjct: 15  TPLLDRADTPHGLRRLGEAELETLADELRLELLYSVGQTGGHFGAGLGVIELTIALHYVF 74

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR+ + TLR+KDG++ +  RSESEYD F  GH   S+
Sbjct: 75  DTPDDRLVWDVGHQAYPHKILTGRRARMSTLRQKDGVAAFPRRSESEYDTFGVGHSSTSI 134

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LGMA+A  ++G     + VI +G   AG A+EA+++A  + ++M+VILND+  S+  
Sbjct: 135 SAALGMAIASRLQGSERKSIAVIGDGALTAGMAFEALNHAPEVAADMLVILNDNDMSI-- 192

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                   ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+GM+ 
Sbjct: 193 ------SRNVGGLSNYLAKILSSRTYSSMREGSKKVLSRL-PGAWEIARRTEEYAKGMLV 245

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAE----D 374
           P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +HVVT++ +  E    D
Sbjct: 246 P--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDL--KGPQFLHVVTKKGKGFEPAEVD 301

Query: 375 TQKSEAIEKQQ----EGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
                AI K +      A    S P       Y   F + +   A+ D  +V +   M+ 
Sbjct: 302 PIGYHAITKLEPLNAPAAQKKISAP------KYSGVFGQWICDMADADARLVGITPAMKE 355

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L  F E+FPERYFDV +AEQHAVT +AG+AC G KP   I S FLQR YDQ+++DV 
Sbjct: 356 GSDLVAFSERFPERYFDVAIAEQHAVTLAAGMACEGSKPVVAIYSTFLQRGYDQLIHDVA 415

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q L V F I  AGLVG DGPT  G+FD++++ C+P M+VM PSDE+EL  +++T   + 
Sbjct: 416 VQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDENELRKLLST-GYLH 474

Query: 551 DRPVCFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
             P   RYPRG    A++  +L      P+EIGKG V  +G+ VA+L +G  +     A 
Sbjct: 475 TGPAAVRYPRGTGPNAVIEANLE-----PVEIGKGVVRRQGQGVAILAFGVQL-----AE 524

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG 665
           AL+    +D TV D RF KP+D  LV E   NH  L+T+EE ++ GG G+ VS F+A   
Sbjct: 525 ALVVAEKLDATVIDMRFVKPMDEALVSEAAANHELLVTLEENAVMGGAGAAVSEFLARAN 584

Query: 666 LLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAAT---ALSLLG 711
           +L S +    + LPD Y+EHA P Q L   GL    I A     L+L+G
Sbjct: 585 ILKSVLH---LGLPDVYVEHAKPAQMLTECGLDAQGIEAAINERLALIG 630


>gi|425901814|ref|ZP_18878405.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas chlororaphis
           subsp. aureofaciens 30-84]
 gi|397892836|gb|EJL09312.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas chlororaphis
           subsp. aureofaciens 30-84]
          Length = 632

 Score =  467 bits (1201), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 283/650 (43%), Positives = 381/650 (58%), Gaps = 44/650 (6%)

Query: 76  KEPT-PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           K PT P+LD    P  L+ L   EL+ LA E+R EL   V +T     + L  +ELT+AL
Sbjct: 11  KRPTTPLLDRANTPDGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIELTIAL 70

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H+VF  P D+++WDVG Q Y HKILTGRR  + +LR+KDG++ +  RSESEYD F  GH 
Sbjct: 71  HYVFDTPDDRLVWDVGHQAYPHKILTGRRERMASLRQKDGLAAFPRRSESEYDTFGVGHS 130

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA LGMA+A  ++      + VI +G   AG A+EA+++A  +D+NM+VILND+  
Sbjct: 131 STSISAALGMAIAARLQNSERKAIAVIGDGALTAGMAFEALNHAPEVDANMLVILNDNDM 190

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+          ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+
Sbjct: 191 SI--------SRNVGGLSNYLAKILSSRTYASMREGSKKVLSRL-PGAWEIARRTEEYAK 241

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---R 371
           GM+ P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +HVVT++ +    
Sbjct: 242 GMLVP--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDL--KGPQFLHVVTKKGKGFAP 297

Query: 372 AE-DTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
           AE D     AI K     S + + P       Y   F E L   A  D  +V +   M+ 
Sbjct: 298 AEVDPIGYHAITKLDPLDSPAAA-PKKAGGPKYSGVFGEWLCDMAAADPRLVGITPAMKE 356

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L  F E+FP RYFDV +AEQHAVT +AG+AC G KP   I S FLQR YDQ+V+DV 
Sbjct: 357 GSDLVAFSERFPLRYFDVAIAEQHAVTLAAGMACEGAKPVVAIYSTFLQRGYDQLVHDVA 416

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q L V F I  AGLVG DGPT  G+FD++F+ C+P M+VM PSDE+EL  M++T   + 
Sbjct: 417 VQNLDVLFAIDRAGLVGEDGPTHAGSFDLSFLRCIPGMLVMTPSDENELRKMLST-GHLY 475

Query: 551 DRPVCFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
           + P   RYPRG    A +  DL      PIEIGKG V  +G  VALL +G  +   LK  
Sbjct: 476 NGPAAVRYPRGTGPNATIEKDLQ-----PIEIGKGVVRRQGSKVALLVFGVQLAEALK-- 528

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG 665
            +  KL  D TV D RF KPLD  LV E+  +H  L+T+EE +I GG G  V  F+A + 
Sbjct: 529 -VADKL--DATVVDMRFVKPLDEALVCEIAASHELLVTIEENAIMGGAGGAVGEFLAREA 585

Query: 666 LLDSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
           +L      +PI+   LPD Y+EHA P Q LA  GL    I A   + L R
Sbjct: 586 IL------KPILHLGLPDLYVEHAKPAQMLAECGLDEAGIEAAIRARLQR 629


>gi|213969290|ref|ZP_03397428.1| deoxyxylulose-5-phosphate synthase [Pseudomonas syringae pv. tomato
           T1]
 gi|301381794|ref|ZP_07230212.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           tomato Max13]
 gi|302061006|ref|ZP_07252547.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           tomato K40]
 gi|302130542|ref|ZP_07256532.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           tomato NCPPB 1108]
 gi|213925968|gb|EEB59525.1| deoxyxylulose-5-phosphate synthase [Pseudomonas syringae pv. tomato
           T1]
          Length = 631

 Score =  467 bits (1201), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 276/645 (42%), Positives = 386/645 (59%), Gaps = 40/645 (6%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD  + P  L+ L   EL+ LA E+R EL   V +T     + L  +ELT+ALH+VF
Sbjct: 15  TPLLDQADTPHGLRRLGEAELETLADELRLELLYSVGQTGGHFGAGLGVIELTIALHYVF 74

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR+ + TLR+KDG++ +  RSESEYD F  GH   S+
Sbjct: 75  DTPDDRLVWDVGHQAYPHKILTGRRARMSTLRQKDGVAAFPRRSESEYDTFGVGHSSTSI 134

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LGMA+A  ++G     + VI +G   AG A+EA+++A  + +NM+VILND+  S+  
Sbjct: 135 SAALGMAIASRLQGSERKSIAVIGDGALTAGMAFEALNHAPEVAANMLVILNDNDMSI-- 192

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                   ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+GM+ 
Sbjct: 193 ------SRNVGGLSNYLAKILSSRTYTSMREGSKKVLSRL-PGAWEIARRTEEYAKGMLV 245

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---RAE-D 374
           P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +HVVT++ +    AE D
Sbjct: 246 P--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDL--KGPQFLHVVTKKGKGFAPAEVD 301

Query: 375 TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
                AI K  E  +   S+     S  Y   F + +   AE D  +V +   M+    L
Sbjct: 302 PIGYHAITK-LEPLNAPASVQKKVSSPKYSGVFGQWICDMAEADSRLVGITPAMKEGSDL 360

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F E+FPERYFDV +AEQHAVT +AG+AC G KP   I S FLQR YDQ+V+DV  Q L
Sbjct: 361 VDFSERFPERYFDVAIAEQHAVTLAAGMACEGSKPVVAIYSTFLQRGYDQLVHDVAVQNL 420

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
            V F I  AGLVG DGPT  G+FD++++ C+P ++VM PSDE+EL  +++T   +   P 
Sbjct: 421 DVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGIVVMTPSDENELRKLLST-GYLHTGPA 479

Query: 555 CFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLS 610
             RYPRG    A++  +L      P+EIGKG V  +G+  A+L +G  +     A AL+ 
Sbjct: 480 AVRYPRGTGPNAVIEANLD-----PVEIGKGVVRRQGQGAAILVFGVQL-----AEALVV 529

Query: 611 KLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDS 669
              +D TV D RF KPLD  LVRE   +H  L+T+EE ++ GG G+ VS F+A   +L S
Sbjct: 530 AEKMDATVIDMRFVKPLDEALVRETAASHELLVTLEENAVMGGAGAAVSEFLARANILKS 589

Query: 670 GVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATA---LSLLG 711
            +    + LPD Y+EHA P Q LA  GL    I A     L+L+G
Sbjct: 590 VLH---LGLPDVYVEHAKPAQMLAECGLDAEGIEAAINERLALIG 631


>gi|170699440|ref|ZP_02890484.1| deoxyxylulose-5-phosphate synthase [Burkholderia ambifaria
           IOP40-10]
 gi|170135640|gb|EDT03924.1| deoxyxylulose-5-phosphate synthase [Burkholderia ambifaria
           IOP40-10]
          Length = 634

 Score =  467 bits (1201), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 278/641 (43%), Positives = 381/641 (59%), Gaps = 46/641 (7%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L  +++P  L+ L  ++L+ LA E+R+ +   VSKT   L S+L  VELT+ALH+VF+ 
Sbjct: 4   LLKTIDDPADLRRLDRRQLQPLADELRAFVLDSVSKTGGHLSSNLGTVELTIALHYVFNT 63

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+I+WDVG QTY HKILTGRR  +H+LR+ DGISG+  RSESEYD F   H   S+SA
Sbjct: 64  PNDRIVWDVGHQTYPHKILTGRRDQMHSLRQYDGISGFPRRSESEYDTFGTAHSSTSISA 123

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPK 259
            LGMA+   + G     + VI +G   AG A+EAM+NAG   D+ ++VILND+  S+ P 
Sbjct: 124 ALGMAIGSQLNGDDRFSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDNDMSISP- 182

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                   + AL+  L+R+ S + +   R   + +   +   + E A K++E+A+GM+ P
Sbjct: 183 -------PVGALNRHLARLMSGRFYAAARAGVERVLS-VAPPVLELARKLEEHAKGMVVP 234

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             +TLFEE G  YIGP+DGH+++ LI  LQ +  L   GP  +HVVT   ++ +  + +E
Sbjct: 235 --ATLFEEFGFNYIGPIDGHDLDSLIPTLQNIREL--RGPQFLHVVT---KKGQGYKLAE 287

Query: 380 AIEKQQEGASDSNSLPFGNYS-----RTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
           A      G    N       S     +TY   F E L  EAE+D  +V +   M     +
Sbjct: 288 ADPVLYHGPGKFNPAEGIKPSPTPAKKTYTQVFGEWLCDEAERDSRVVGITPAMREGSGM 347

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F+++F +RY+DVG+AEQHAVTF+ GLA  GLKP   I S FLQRAYDQ+++DV  Q L
Sbjct: 348 VEFEKRFKDRYYDVGIAEQHAVTFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNL 407

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PV F I  AGLVG+DG T  GA+D+ FM C+PNM +MA SDEDE   M+ T A     P 
Sbjct: 408 PVVFAIDRAGLVGADGATHAGAYDLAFMRCIPNMTIMAASDEDECRQMLHT-ALQQPNPT 466

Query: 555 CFRYPRGAIVR-TDLPGYRGIPIEIGKGKVL-----VEGKDVALLGYGAMVQNCLKARAL 608
             RYPRGA      +  +  IP  +GKG+V       EGK VA+L +G MV   L A   
Sbjct: 467 AVRYPRGAGTGVATVKEFTEIP--LGKGEVRRRTSQPEGKRVAILAFGTMVAPSLAAGEE 524

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLL 667
           L     D TVA+ RF KP+D  LVREL + H +L+TVEEG + GG GS       ++ L+
Sbjct: 525 L-----DATVANMRFVKPVDAALVRELAETHDYLVTVEEGCVMGGAGS-----ACVEALM 574

Query: 668 DSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAAT 705
           +SGV  RP++   LPD +I+H  P + LA  GL G  IA +
Sbjct: 575 ESGV-IRPVIQLGLPDQFIDHGDPAKLLAQCGLDGAGIAKS 614


>gi|253995977|ref|YP_003048041.1| deoxyxylulose-5-phosphate synthase [Methylotenera mobilis JLW8]
 gi|253982656|gb|ACT47514.1| deoxyxylulose-5-phosphate synthase [Methylotenera mobilis JLW8]
          Length = 617

 Score =  467 bits (1201), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 268/644 (41%), Positives = 387/644 (60%), Gaps = 41/644 (6%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+L+ + +P +L+ L  +EL QLA E+R  L   V+KT   L S+L  VELT+ALH+VF
Sbjct: 2   TPLLNTINDPEQLRLLERRELVQLAHELRLFLVDSVAKTGGHLASNLGVVELTIALHYVF 61

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P DK++WDVG QTY HKILTGRR  +  LRK  GI+G+  R+ES YD F  GH   S+
Sbjct: 62  NTPDDKLVWDVGHQTYPHKILTGRREAMQNLRKPQGIAGFPRRNESGYDTFGTGHSSTSI 121

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LGMAVA    G     V +I +G   AG A+EA++NAG +D+N++V+LND+  S+  
Sbjct: 122 SAALGMAVAAQKAGSERRSVAIIGDGAMTAGMAFEALNNAGNMDANLLVVLNDNDMSI-- 179

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                   ++ AL++ L+++ SS+ +  +R+  K +   +   M E+A + +E+ +GM+ 
Sbjct: 180 ------SNNVGALNNYLAKLLSSRFYGTVRKSGKKVLSAL-PPMMEFAKRAEEHVKGMVT 232

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
           P   TLFEE G  YIGP+DGH+++ LI  L  +  L   GP  +H+VT++ +  E    +
Sbjct: 233 P--GTLFEEFGFNYIGPIDGHDLDALIDTLHNIKQLN--GPQFLHIVTQKGKGFE---PA 285

Query: 379 EAIEKQQEGASDSNSLPF-GN-----YSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
           EA   +  G    +  PF GN      +++Y + F + LV  A  D  ++ V   M    
Sbjct: 286 EANPNKFHGVGKFD--PFNGNAISAKAAKSYTEVFGDWLVDMAAADHRLIGVTPAMCDGS 343

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            L  F  +FPERY+DVG+AEQHA+TF+AG+AC GLKP   I S FLQRAYDQ+++D+  Q
Sbjct: 344 GLNAFASQFPERYYDVGIAEQHALTFAAGMACDGLKPVVAIYSTFLQRAYDQLIHDIALQ 403

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
            LPV   I  AGLVG+DGPT  G+FD+TFM C+PN+++M PS+E+E   M++T   + + 
Sbjct: 404 NLPVLLAIDRAGLVGADGPTHAGSFDLTFMRCIPNIVIMTPSNENECRQMLST-GFLYNG 462

Query: 553 PVCFRYPR----GAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARAL 608
               RYPR    GA V   L     +PIEIGKG++  +G+ VA+L +G+M+   L+A   
Sbjct: 463 VAAVRYPRGSGTGATVNNSL-----LPIEIGKGRIERQGEKVAILAFGSMLAPALEAAEA 517

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFI-ALDGL 666
                I+ TVA+ RF KP+D  L+ +L   HT +IT+EE  + GG GS V   + A+   
Sbjct: 518 -----INATVANMRFVKPIDHALIAQLASTHTAIITIEENCVMGGAGSAVMESLQAMQHS 572

Query: 667 LDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
           L   +K   + LPD +IEH      LA  GL    IA+    L+
Sbjct: 573 LSHTIKTLSLGLPDQFIEHGVHETMLADCGLDAKGIASAIAKLI 616


>gi|422646393|ref|ZP_16709526.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           maculicola str. ES4326]
 gi|330959940|gb|EGH60200.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 631

 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 273/643 (42%), Positives = 385/643 (59%), Gaps = 37/643 (5%)

Query: 71  DFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVEL 130
           D   ++  TP+LD  + P  L+ L   EL+ LA E+R EL   V +T     + L  +EL
Sbjct: 7   DIPRERPVTPLLDRADTPEGLRRLGEAELETLADELRLELLYSVGQTGGHFGAGLGVIEL 66

Query: 131 TVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFN 190
           T+ALH+VF  P D+++WDVG Q Y HKILTGRR+ + TLR+KDG++ +  RSESEYD F 
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRARMSTLRQKDGVAAFPRRSESEYDTFG 126

Query: 191 AGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
            GH   S+SA LGMA+A  ++G     + VI +G   AG A+EA+++A  + ++M+VILN
Sbjct: 127 VGHSSTSISAALGMAIASRLQGSERKSIAVIGDGALTAGMAFEALNHAPEVAADMLVILN 186

Query: 251 DSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVD 310
           D+  S+          ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +
Sbjct: 187 DNDMSI--------SRNVGGLSNYLAKILSSRTYTSMREGSKKVLSRL-PGAWEIARRTE 237

Query: 311 EYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR 370
           EYA+GM+ P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +HVVT++ +
Sbjct: 238 EYAKGMLVP--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDL--KGPQFLHVVTKKGK 293

Query: 371 ---RAE-DTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHA 426
               AE D     AI K  E A+   S+     +  Y   F + +   A  D  +V +  
Sbjct: 294 GFAPAEVDPIGYHAITK-LEPANAPVSIQKKVSAPKYSGVFGQWICDMAAADSRLVGITP 352

Query: 427 GMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVV 486
            M+    L  F E+FPERYFDV +AEQHAVT +AG+AC G KP   I S FLQR YDQ+V
Sbjct: 353 AMKEGSDLVEFSERFPERYFDVAIAEQHAVTLAAGMACEGSKPVVAIYSTFLQRGYDQLV 412

Query: 487 NDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATV 546
           +DV  Q L V F I  AGLVG DGPT  G+FD++++ C+P ++VM PSDE+EL  +++T 
Sbjct: 413 HDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGIVVMTPSDENELRKLLST- 471

Query: 547 ASIDDRPVCFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNC 602
             + + P   RYPRG    A++  DL      P+EIGKG V  +G+ VA+L +G  +   
Sbjct: 472 GYLHNGPAAVRYPRGTGPNAVIEADLE-----PVEIGKGVVRRQGQGVAILVFGVQLTE- 525

Query: 603 LKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFI 661
               AL+    +D TV D RF KPLD  LVRE   +H  L+T+EE ++ GG G+ VS F+
Sbjct: 526 ----ALVVAEKLDATVIDMRFVKPLDEALVREAAAHHELLVTLEENAVMGGAGAAVSEFL 581

Query: 662 ALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAA 704
           A   +L S +    + LPD Y+EHA P Q LA  GL    I A
Sbjct: 582 ARANILKSVLH---LGLPDVYVEHAKPAQMLAECGLNAEGIEA 621


>gi|70732811|ref|YP_262578.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas protegens
           Pf-5]
 gi|118595604|sp|Q4K5A5.1|DXS_PSEF5 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|68347110|gb|AAY94716.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas protegens
           Pf-5]
          Length = 633

 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 279/649 (42%), Positives = 385/649 (59%), Gaps = 41/649 (6%)

Query: 76  KEPT-PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           K PT P+LD  + P  L+ L   EL+ LA E+R EL   V +T     + L  +ELT+AL
Sbjct: 11  KRPTTPLLDRAQTPDGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIELTIAL 70

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H+VF  P D+++WDVG Q Y HKILTGRR  + +LR+KDG++ +  RSESEYD F  GH 
Sbjct: 71  HYVFDTPDDRLVWDVGHQAYPHKILTGRREQMASLRQKDGLAAFPRRSESEYDTFGVGHS 130

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA LGMA+A  ++      + VI +G   AG A+EA+++A  +D+NM+VILND+  
Sbjct: 131 STSISAALGMAIAARLQNSERKAIAVIGDGALTAGMAFEALNHAPEVDANMLVILNDNDM 190

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+          ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+
Sbjct: 191 SI--------SRNVGGLSNYLAKILSSRTYASMREGSKKVLSRL-PGAWEIARRTEEYAK 241

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---R 371
           GM+ P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +HVVT++ +    
Sbjct: 242 GMLVP--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDL--KGPQFLHVVTKKGKGFAP 297

Query: 372 AE-DTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
           AE D     AI K  E      + P       Y   F E L   A  D  +V +   M+ 
Sbjct: 298 AEVDPIGYHAITK-LEPLDAPAAAPKKAGGPKYSGVFGEWLCDMAAADPRLVGITPAMKE 356

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L  F E+FP RYFDV +AEQHAVT +AG+AC G KP   I S FLQR YDQ+++DV 
Sbjct: 357 GSDLVAFSERFPLRYFDVAIAEQHAVTLAAGMACEGAKPVVAIYSTFLQRGYDQLIHDVA 416

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q L V F I  AGLVG DGPT  G+FD++++ C+P M+VM PSDE+EL  M++T   + 
Sbjct: 417 VQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDENELRMMLST-GHLY 475

Query: 551 DRPVCFRYPRGAIVRTDLPGYRGI-PIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALL 609
           + P   RYPRG     + P  + + PIEIGKG +  +G+ VALL +G  +   L+    L
Sbjct: 476 NGPAAVRYPRG--TGPNAPIDKSLEPIEIGKGVIRRQGRQVALLVFGVQLAEALQVAEKL 533

Query: 610 SKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLD 668
                D TV D RF KPLD  LVRE+  +H  L+T+EE +I GG G  VS ++A + +L 
Sbjct: 534 -----DATVVDMRFVKPLDEALVREIASSHELLVTIEENAIMGGAGGAVSEYLARENIL- 587

Query: 669 SGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAATA---LSLLG 711
                +PI+   LPD Y+EHA P Q LA  GL    I A+    L+LLG
Sbjct: 588 -----KPILHLGLPDAYVEHAKPAQMLAECGLDEAGIEASVRQRLALLG 631


>gi|422651840|ref|ZP_16714631.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           actinidiae str. M302091]
 gi|330964914|gb|EGH65174.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           actinidiae str. M302091]
          Length = 631

 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 276/645 (42%), Positives = 387/645 (60%), Gaps = 40/645 (6%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD  + P  L+ L   EL+ LA E+R EL   V +T     + L  +ELT+ALH+VF
Sbjct: 15  TPLLDQADTPHGLRRLGEAELETLADELRLELLYSVGQTGGHFGAGLGVIELTIALHYVF 74

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR+ + TLR+KDG++ +  RSESEYD F  GH   S+
Sbjct: 75  DTPDDRLVWDVGHQAYPHKILTGRRARMSTLRQKDGVAAFPRRSESEYDTFGVGHSSTSI 134

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LGMA+A  ++G     + VI +G   AG A+EA+++A  + +NM+VILND+  S+  
Sbjct: 135 SAALGMAIASRLQGSERKSIAVIGDGALTAGMAFEALNHAPEVAANMLVILNDNDMSI-- 192

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                   ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+GM+ 
Sbjct: 193 ------SRNVGGLSNYLAKILSSRTYTSMREGSKKVLSRL-PGAWEIARRTEEYAKGMLV 245

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---RAE-D 374
           P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +HVVT++ +    AE D
Sbjct: 246 P--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDL--KGPQFLHVVTKKGKGFAPAEVD 301

Query: 375 TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
                AI K  E  +   S+     S  Y   F + +   AE D  +V +   M+    L
Sbjct: 302 PIGYHAITK-LEPLNAPVSVQKKVSSPKYSGVFGQWICDMAEVDSRLVGITPAMKEGSDL 360

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F E+FPERYFDV +AEQHAVT +AG+AC G KP   I S FLQR YDQ+V+DV  Q L
Sbjct: 361 VDFSERFPERYFDVAIAEQHAVTLAAGMACEGSKPVVAIYSTFLQRGYDQLVHDVAVQNL 420

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
            V F I  AGLVG DGPT  G+FD++++ C+P ++VM PSDE+EL  +++T   +   P 
Sbjct: 421 DVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGIVVMTPSDENELRKLLST-GYLHTGPA 479

Query: 555 CFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLS 610
             RYPRG    A++  +L      P+EIGKG V  +G+ VA+L +G  +     A AL+ 
Sbjct: 480 AVRYPRGTGPNAVIEANLD-----PVEIGKGVVRRQGQGVAILAFGVQL-----AEALVV 529

Query: 611 KLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDS 669
              ++ TV D RF KPLD  LVRE   +H  L+T+EE ++ GG G+ VS F+A   +L S
Sbjct: 530 AEKLNATVIDMRFVKPLDEALVRETAASHQLLVTLEENAVMGGAGAAVSEFLARANILKS 589

Query: 670 GVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATA---LSLLG 711
            +    + LPD Y+EHA P Q LA  GL    I A     L+L+G
Sbjct: 590 VLH---LGLPDVYVEHAKPAQMLAECGLDAEGIEAAINERLALIG 631


>gi|422590458|ref|ZP_16665113.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           morsprunorum str. M302280]
 gi|330877559|gb|EGH11708.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           morsprunorum str. M302280]
          Length = 631

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 271/628 (43%), Positives = 380/628 (60%), Gaps = 37/628 (5%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD  + P  L+ L   EL+ LA E+R EL   V +T     + L  +ELT+ALH+VF
Sbjct: 15  TPLLDQADTPHGLRRLGEAELETLADELRLELLYSVGQTGGHFGAGLGVIELTIALHYVF 74

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR+ + TLR+KDG++ +  RSESEYD F  GH   S+
Sbjct: 75  DTPDDRLVWDVGHQAYPHKILTGRRARMSTLRQKDGVAAFPRRSESEYDTFGVGHSSTSI 134

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LGMA+A  ++G     + VI +G   AG A+EA+++A  + +NM+VILND+  S+  
Sbjct: 135 SAALGMAIASRLQGSERKSIAVIGDGALTAGMAFEALNHAPEVAANMLVILNDNDMSI-- 192

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                   ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+GM+ 
Sbjct: 193 ------SRNVGGLSNYLAKILSSRTYTSMREGSKKVLSRL-PGAWEIARRTEEYAKGMLV 245

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---RAE-D 374
           P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +HVVT++ +    AE D
Sbjct: 246 P--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDL--KGPQFLHVVTKKGKGFAPAEVD 301

Query: 375 TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
                AI K  E  +   S+     S  Y   F + +   AE D  +V +   M+    L
Sbjct: 302 PIGYHAITK-LEPLNAPVSVQKKVSSPKYSGVFGQWICDMAEVDSRLVGITPAMKEGSDL 360

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F E+FPERYFDV +AEQHAVT +AG+AC G KP   I S FLQR YDQ+V+DV  Q L
Sbjct: 361 VDFSERFPERYFDVAIAEQHAVTLAAGMACEGSKPVVAIYSTFLQRGYDQLVHDVAVQNL 420

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
            V F I  AGLVG DGPT  G+FD++++ C+P ++VM PSDE+EL  +++T   +   P 
Sbjct: 421 DVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGIVVMTPSDENELRKLLST-GYLHTGPA 479

Query: 555 CFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLS 610
             RYPRG    A++  +L      P+EIGKG V  +G+ VA+L +G  +     A AL+ 
Sbjct: 480 AVRYPRGTGPNAVIEANLD-----PVEIGKGVVRRQGQRVAILAFGVQL-----AEALVV 529

Query: 611 KLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDS 669
              +D TV D RF KPLD  L+RE   +H  L+T+EE ++ GG G+ VS F+A   +L S
Sbjct: 530 AEKLDATVIDMRFVKPLDEALIRETAASHELLVTLEENAVMGGAGAAVSEFLARANILKS 589

Query: 670 GVKWRPIVLPDNYIEHASPTQQLALAGL 697
            +    + LPD Y+EHA P Q LA  GL
Sbjct: 590 VLH---LGLPDVYVEHAKPAQMLAECGL 614


>gi|167566510|ref|ZP_02359426.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia oklahomensis
           EO147]
 gi|167573591|ref|ZP_02366465.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia oklahomensis
           C6786]
          Length = 634

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 278/641 (43%), Positives = 382/641 (59%), Gaps = 46/641 (7%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L  +++P  L+ L  ++L+ LA E+R+ +   VSKT   L S+L  VELT+ALH+VF  
Sbjct: 4   LLKTIDDPADLRRLDRRQLQPLADELRAFVLDSVSKTGGHLSSNLGTVELTIALHYVFDT 63

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+I+WDVG QTY HKILTGRR  + TLR+ DGISG+  RSESEYD F   H   S+SA
Sbjct: 64  PDDRIVWDVGHQTYPHKILTGRRDEMKTLRQLDGISGFPRRSESEYDTFGTAHSSTSISA 123

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPK 259
            LGMA+   +KG     + VI +G   AG A+EAM+NAG   D+ ++VILND+  S+ P 
Sbjct: 124 ALGMAIGSKLKGDDRFSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDNDMSISP- 182

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                   + AL+  L+R+ S + +   R   + +   +   M E A K++E+A+GM+ P
Sbjct: 183 -------PVGALNRHLARLMSGRFYAAARAGVERVLS-VAPPMLELARKLEEHAKGMVVP 234

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             +TLFEE G  YIGP+DGH+++ LI  LQ +  L   GP  +HVVT   ++ +  + +E
Sbjct: 235 --ATLFEEFGFNYIGPIDGHDLDSLIPTLQNIKEL--RGPQFLHVVT---KKGQGYKLAE 287

Query: 380 AIEKQQEGASDSNSLPFGNYS-----RTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
           A      G    N       S     +TY   F E L   AE D  +V +   M     +
Sbjct: 288 ADPVLYHGPGKFNPAEGIKPSTTPAKKTYTQVFGEWLCDAAELDSRVVGITPAMREGSGM 347

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F+++FPERY+DVG+AEQHAVTF+ GLA  GLKP   I S FLQRAYDQ+++DV  Q L
Sbjct: 348 VEFEKRFPERYYDVGIAEQHAVTFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNL 407

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PV F I  AGLVG+DG T  GA+D++F+ C+PNM VMA SDE+E   M+ T A     P 
Sbjct: 408 PVVFAIDRAGLVGADGATHAGAYDLSFLRCIPNMTVMAASDENECRQMLHT-ALQQPNPT 466

Query: 555 CFRYPRGAIVR-TDLPGYRGIPIEIGKGKVL-----VEGKDVALLGYGAMVQNCLKARAL 608
             RYPRGA      +  +  IP  +GKG+V       EGK VA+L +G MV   L A   
Sbjct: 467 AVRYPRGAGTGVATVKAFTEIP--LGKGEVRRRTSQPEGKRVAILAFGTMVAPSLAAAEA 524

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLL 667
           L     D TVA+ RF KP+D +LV+EL Q H +L+TVEEG + GG GS       ++ ++
Sbjct: 525 L-----DATVANMRFVKPIDAELVQELAQTHDYLVTVEEGCVMGGAGS-----ACVEAMM 574

Query: 668 DSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAAT 705
           +SGV  RP++   LPD +I+H  P + L++ GL G  IA +
Sbjct: 575 ESGV-IRPVLQLGLPDRFIDHGDPAKLLSMCGLDGDGIAKS 614


>gi|340785926|ref|YP_004751391.1| 1-deoxy-d-xylulose-5-phosphate synthase [Collimonas fungivorans
           Ter331]
 gi|340551193|gb|AEK60568.1| 1-deoxy-D-xylulose 5-phosphate synthase [Collimonas fungivorans
           Ter331]
          Length = 623

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 273/650 (42%), Positives = 391/650 (60%), Gaps = 43/650 (6%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L+ +++P  L+ LT  +L+ LA E+R  +   V++T   L S+L  VELT+ALH+VF+ 
Sbjct: 3   LLNTIDSPADLRKLTRAQLRPLADELREFVIESVAQTGGHLSSNLGTVELTIALHYVFNT 62

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+++WDVG QTY HKILTGRR  +HTLR+ DGISG+  R+ESEYD F   H   S+SA
Sbjct: 63  PEDRVVWDVGHQTYPHKILTGRRDRMHTLRQLDGISGFPRRAESEYDTFGTAHSSTSISA 122

Query: 201 GLGMAVARDIKGKRE-CIVTVISNGTTMAGQAYEAMSNAG-YLDSNMIVILNDSRHSLHP 258
            LGMA+A   KG+ +   + VI +G   AG  +EAM+NAG Y D NM+VILND+  S+ P
Sbjct: 123 VLGMALAAKTKGETDRHAIAVIGDGAMTAGMVFEAMNNAGVYDDINMLVILNDNDMSISP 182

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
            +         AL+  L+R+ S + + Q + V K +   +   M + A + +E+A+GM+ 
Sbjct: 183 PV--------GALNRYLARLMSGQFYAQAKNVGKSI---LPGPMRQLAKRFEEHAKGMVV 231

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
           P  +T+FEE G  YIGP+DGH++E LI  LQ + +L   GP  +HVVT   ++ +  + +
Sbjct: 232 P--ATMFEEFGFNYIGPIDGHDLESLIPTLQNLKNL--KGPQFLHVVT---KKGQGYKLA 284

Query: 379 EAIEKQQEGASDSNSL----PFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
           EA      G    N      P      TY   F + L   A +D  ++ +   M     L
Sbjct: 285 EADPVLYHGPGKFNPAEGIKPATVSKMTYTQVFGDWLCDMAAQDDKLIGITPAMSGGSGL 344

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F ++FP+R++DVG+AEQHAVTF+AGLAC GLKP   I S FLQRAYDQ+++DV  Q L
Sbjct: 345 DTFAQRFPQRFYDVGIAEQHAVTFAAGLACEGLKPVVAIYSTFLQRAYDQLIHDVALQNL 404

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
            V F +  +GLVG+DG T  G +D+ ++ C+PNM+VMA SDE+E   M++T    +  P 
Sbjct: 405 DVTFALDRSGLVGADGATHAGNYDMAYLRCIPNMVVMAASDENECRQMLSTAYHYNG-PA 463

Query: 555 CFRYPRGA-IVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
             RYPRGA I    +P    +P  +GKG++  +G+ VA+L +G+M+   + A  LL    
Sbjct: 464 AVRYPRGAGIGAAIVPELTTLP--LGKGEIRRQGQSVAILAFGSMLAPSMAAGELL---- 517

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVK 672
            D TV + RF KPLD+ LV EL QNH  L+TVEEGSI GG GS V+  +A  G +     
Sbjct: 518 -DATVVNMRFIKPLDVDLVLELAQNHDALVTVEEGSIMGGAGSAVAEALAAAGCV----- 571

Query: 673 WRPIV---LPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLL 719
            +P++   LPD +I+H    Q LA  GL    IAA+     G+ +  L++
Sbjct: 572 -KPLLNLGLPDRFIDHGDVGQLLAQCGLNAEGIAASIRQRFGKDQPRLVV 620


>gi|422659618|ref|ZP_16722042.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           lachrymans str. M302278]
 gi|331018235|gb|EGH98291.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           lachrymans str. M302278]
          Length = 631

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 276/645 (42%), Positives = 386/645 (59%), Gaps = 40/645 (6%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD  + P  L+ L   EL+ LA E+R EL   V +T     + L  +ELT+ALH+VF
Sbjct: 15  TPLLDQADTPHGLRRLGEAELETLADELRLELLYSVGQTGGHFGAGLGVIELTIALHYVF 74

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR+ + TLR+KDG++ +  RSESEYD F  GH   S+
Sbjct: 75  DTPDDRLVWDVGHQAYPHKILTGRRARMSTLRQKDGVAAFPRRSESEYDTFGVGHSSTSI 134

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LGMA+A  ++G     + VI +G   AG A+EA+++A  + +NM+VILND+  S+  
Sbjct: 135 SAALGMAIASRLQGSERKSIAVIGDGALTAGMAFEALNHAPEVAANMLVILNDNDMSI-- 192

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                   ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+GM+ 
Sbjct: 193 ------SRNVGGLSNYLAKILSSRTYTSMREGSKKVLSRL-PGAWEIARRTEEYAKGMLV 245

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---RAE-D 374
           P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +HVVT++ +    AE D
Sbjct: 246 P--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDL--KGPQFLHVVTKKGKGFAPAEVD 301

Query: 375 TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
                AI K  E  +   S+     S  Y   F + +   AE D  +V +   M+    L
Sbjct: 302 PIGYHAITK-LEPLNAPVSVQKKVSSPKYSGVFGQWICDMAEADSRLVGITPAMKEGSDL 360

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F E+FPERYFDV +AEQHAVT +AG+AC G KP   I S FLQR YDQ+V+DV  Q L
Sbjct: 361 VDFSERFPERYFDVAIAEQHAVTLAAGMACEGSKPVVAIYSTFLQRGYDQLVHDVAVQNL 420

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
            V F I  AGLVG DGPT  G+FD++++ C+P ++VM PSDE+EL  +++T   +   P 
Sbjct: 421 DVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGIVVMTPSDENELRKLLST-GYLHTGPA 479

Query: 555 CFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLS 610
             RYPRG    A++  +L      P+EIGKG V  +G+ VA+L +G  +     A AL+ 
Sbjct: 480 AVRYPRGTGPNAVIEANLD-----PVEIGKGVVRRQGQGVAILVFGVQL-----AEALVV 529

Query: 611 KLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDS 669
              +D TV D RF KPLD  LVRE   +H  L+T+EE ++ GG G+ V  F+A   +L S
Sbjct: 530 AEKLDATVIDMRFVKPLDEALVRETAASHELLVTLEENAVMGGAGAAVGEFLARANILKS 589

Query: 670 GVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATA---LSLLG 711
            +    + LPD Y+EHA P Q LA  GL    I A     L+L+G
Sbjct: 590 VLH---LGLPDVYVEHAKPAQMLAECGLDAEGIEAAINERLALIG 631


>gi|104779860|ref|YP_606358.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas entomophila
           L48]
 gi|123381053|sp|Q1IFL1.1|DXS_PSEE4 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|95108847|emb|CAK13543.1| 1-deoxyxylulose-5-phosphate synthase [Pseudomonas entomophila L48]
          Length = 631

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 273/639 (42%), Positives = 378/639 (59%), Gaps = 44/639 (6%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD  + P  L+ L   +L+ LA E+R +L   V +T     + L  +ELT+ALH+VF
Sbjct: 15  TPLLDRADTPAGLRRLAEADLETLADELRQDLLYTVGQTGGHFGAGLGVIELTIALHYVF 74

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR  + +LR+KDGI+ +  RSESEYD F  GH   S+
Sbjct: 75  DTPDDRLVWDVGHQAYPHKILTGRRDRMLSLRQKDGIAAFPRRSESEYDTFGVGHSSTSI 134

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LGMA+A  ++      + VI +G   AG A+EA+++A  +D+NM+VILND+  S+  
Sbjct: 135 SAALGMAIAARLQNDPRKSIAVIGDGALTAGMAFEALNHAQEVDANMLVILNDNDMSI-- 192

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                   ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+GM+ 
Sbjct: 193 ------SRNVGGLSNYLAKILSSRTYASMREGSKKVLSRL-PGAWEIARRTEEYAKGMLV 245

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---RAE-D 374
           P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +HVVT++ +    AE D
Sbjct: 246 P--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDL--KGPQFLHVVTKKGKGFAPAEVD 301

Query: 375 TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
                AI K +   +D    P       Y   F + L   A  D  +V +   M+    L
Sbjct: 302 PIGYHAITKLE--PADKPVAPKKPSGPKYSAVFGQWLCDMAAADNRLVGITPAMKEGSDL 359

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F E++PERYFDV +AEQHAVTF+AG+AC G KP   I S FLQRAYDQ+++DV  Q L
Sbjct: 360 VDFSERYPERYFDVAIAEQHAVTFAAGMACEGAKPVVAIYSTFLQRAYDQLIHDVAVQDL 419

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
            V F I  AGLVG DGPT  GA+D++++ C+P M+VM PSDE+EL  M++T       P 
Sbjct: 420 DVLFAIDRAGLVGEDGPTHAGAYDLSYLRCIPGMLVMTPSDENELRKMLSTGHHYKG-PA 478

Query: 555 CFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLS 610
             RYPRG    A +  DL      P+EIGKG V  +G  VALL +G  +   L+      
Sbjct: 479 AVRYPRGTGPNAPISGDLE-----PLEIGKGVVRRQGGKVALLVFGVQLTEALQVAEQ-- 531

Query: 611 KLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDS 669
              ID TV D RF KPLD  LV E+   H  L+T+EE +I GG G+ V  F+A +G++  
Sbjct: 532 ---IDATVVDMRFVKPLDEALVLEMAAGHELLVTIEENAIMGGAGAAVGEFLAREGVV-- 586

Query: 670 GVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAAT 705
               +P++   LPD Y+EHA P Q LA  GL    I A+
Sbjct: 587 ----KPLLHLGLPDIYVEHAKPAQMLAECGLDAAGIEAS 621


>gi|372490115|ref|YP_005029680.1| 1-deoxy-D-xylulose-5-phosphate synthase [Dechlorosoma suillum PS]
 gi|359356668|gb|AEV27839.1| 1-deoxy-D-xylulose-5-phosphate synthase [Dechlorosoma suillum PS]
          Length = 618

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 269/632 (42%), Positives = 372/632 (58%), Gaps = 46/632 (7%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD +++P +L+ L  ++L QLA E+R+ +   VS+T   L S+L  VELT+ALH+VF
Sbjct: 5   TPLLDTIDSPAQLRRLDKRQLPQLAEELRTFIVESVSRTGGHLSSNLGTVELTIALHYVF 64

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG QTY HKILTGRR+ +  LR   G+SG+  R ES YD F  GH   S+
Sbjct: 65  DTPEDRLVWDVGHQTYPHKILTGRRAGMAKLRMHGGLSGFPKRCESAYDTFGVGHSSTSI 124

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LGMA+A   KG+    V +I +G   AG A+EA++NAG  D+NM+VILND+  S+ P
Sbjct: 125 SAALGMALAAKQKGENRKAVAIIGDGAMSAGMAFEALNNAGVADANMLVILNDNDMSISP 184

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                    + AL+  L+R+ S   +   R   + +   +   + E A + +E+ +GM+ 
Sbjct: 185 --------PVGALNKYLARLLSGGLYSAARRAGEKVLG-VAPPLLELAKRAEEHVKGMLT 235

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
           P   TLFEELG  YIGP+DGH+++ L+  LQ +  L   GP  +HV+T++ +  +  + +
Sbjct: 236 P--GTLFEELGFNYIGPIDGHDLDALVPTLQNLKGL--KGPQFLHVITKKGQGYKLAEAN 291

Query: 379 EAI-----EKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
             +     + Q E    S     G    TY   F + L   A  +  +V +   M     
Sbjct: 292 PVLYHGVSKFQPEVGIQSGK---GGGKLTYTQVFSDWLCDMAAAEPRLVGITPAMGEGSG 348

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L  F E +PERYFDVG+AEQHAVTF+AGLAC GLKP   I S FLQR YDQ+V+DV  Q 
Sbjct: 349 LVRFAELYPERYFDVGIAEQHAVTFAAGLACEGLKPVVAIYSTFLQRGYDQLVHDVALQN 408

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPV F I   GLVG+DG T  GAFD++FM+C+PN+++MAP+DEDE   M+ T   ID  P
Sbjct: 409 LPVVFAIDRGGLVGADGATHHGAFDLSFMTCIPNLVIMAPADEDECRKMLTTAMGIDG-P 467

Query: 554 VCFRYPRGA-------IVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
              RYPRG           T LP        +GKG++  +GK VALL +G+MVQ  L A 
Sbjct: 468 SAVRYPRGGGSGVTPETALTALP--------VGKGEIRRQGKGVALLAFGSMVQAALGAG 519

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-IGGFGSHVSHFIALDG 665
             L     D +VA+ RF KPLD +L+ EL +NH  L++VEE + IGG GS V+  +   G
Sbjct: 520 DAL-----DASVANMRFVKPLDRELLAELARNHELLVSVEENALIGGAGSEVARALEEMG 574

Query: 666 LLDSGVKWRPIVLPDNYIEHASPTQQLALAGL 697
           L    V    + LPD++I+H      LA  GL
Sbjct: 575 LT---VPLLRLGLPDHFIDHGDQNLLLAELGL 603


>gi|399018342|ref|ZP_10720522.1| 1-deoxy-D-xylulose-5-phosphate synthase [Herbaspirillum sp. CF444]
 gi|398101587|gb|EJL91799.1| 1-deoxy-D-xylulose-5-phosphate synthase [Herbaspirillum sp. CF444]
          Length = 620

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 275/651 (42%), Positives = 384/651 (58%), Gaps = 46/651 (7%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L+ + +P  L+ L   +LK LA E+R+ +   VSKT   L S+L  VELT+ALH+VF+ 
Sbjct: 1   MLNTINSPADLRQLPRTQLKPLADELRAFVLDSVSKTGGHLSSNLGTVELTIALHYVFNT 60

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+I+WDVG QTY HKILTGRR  + TLR+ DGISG+  R+ESEYD F   H   S+SA
Sbjct: 61  PEDRIVWDVGHQTYPHKILTGRRDQMSTLRQFDGISGFPRRAESEYDTFGTAHSSTSISA 120

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPK 259
            LGMA+A   KG+    + VI +G   AG A+EAM+NAG   D N++VILND+  S+ P 
Sbjct: 121 ALGMALAAKTKGEDRHAIAVIGDGAMTAGMAFEAMNNAGICEDVNLLVILNDNDMSISP- 179

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                   + AL+  L+R+ S + + + + V K M   +   M E A +++E+A+GMI P
Sbjct: 180 -------PVGALNRYLARLMSGQFYAKAKNVGKSM---LPAPMLELAKRLEEHAKGMIVP 229

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             +T+FEE G  YIGP+DGH+++ LI  LQ + +L   GP  +HVVT   ++ +  + +E
Sbjct: 230 --ATMFEEFGFNYIGPIDGHDLDSLIPTLQNLKNL--KGPQFLHVVT---KKGQGYKLAE 282

Query: 380 AIEKQQEGASDSNSL----PFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQ 435
           A      G    N      P      TY   F E L   A +DK +V +   M     + 
Sbjct: 283 ADPVLYHGPGKFNPAEGIKPAAASKLTYTQVFGEWLCDMAAQDKTLVGITPAMREGSGMV 342

Query: 436 LFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLP 495
            F++KFP+RY+DVG+AEQHAVTF+AG+AC GLKP   I S FLQRAYDQ+++DV  Q L 
Sbjct: 343 KFEQKFPDRYYDVGIAEQHAVTFAAGMACEGLKPVVAIYSTFLQRAYDQLIHDVALQNLD 402

Query: 496 VRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVC 555
           V F +  AGLVG+DG T  G +D+ F+ C+PNM+VMA SDE+E   M++T  +    P  
Sbjct: 403 VTFALDRAGLVGADGATHAGNYDLAFLRCIPNMVVMAASDENECRQMLSTAFAYKG-PAS 461

Query: 556 FRYPR----GAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSK 611
            RYPR    GA V   L       I +GKG+V  EGK +A+L +G MV     A AL + 
Sbjct: 462 VRYPRGAGTGAAVEKTL-----TAIPLGKGEVRREGKGIAILAFGTMV-----APALATG 511

Query: 612 LGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGV 671
             ++ TVA+ RF KPLD+ L+R+L  +H  L+TVEEG I G           +  +    
Sbjct: 512 DKLNATVANMRFIKPLDVALIRQLAASHDALVTVEEGCIMGGAGAAVAEALAEAGI---- 567

Query: 672 KWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLL 719
             +PI+   LPD +I+H    Q LA  GL G  IAA+ +   G+ +  L++
Sbjct: 568 -VKPILHLGLPDRFIDHGDAGQLLASCGLDGDGIAASIVQRFGKDQPRLVV 617


>gi|82701370|ref|YP_410936.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrosospira multiformis
           ATCC 25196]
 gi|118595593|sp|Q2YCH7.1|DXS_NITMU RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|82409435|gb|ABB73544.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrosospira multiformis
           ATCC 25196]
          Length = 614

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 260/624 (41%), Positives = 379/624 (60%), Gaps = 33/624 (5%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+L+ + +P++L++L  K L QLA E+R  L   V+KT   L S+L  VELT+ALH+VF+
Sbjct: 3   PLLNTITDPVKLRALDRKLLPQLADELRQFLVESVAKTGGHLSSNLGTVELTIALHYVFN 62

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG QTY HKILTGRR  +  LR + GI+G+  R ESEYD F   H   S+S
Sbjct: 63  TPYDRLVWDVGHQTYVHKILTGRREGMSKLRMRGGIAGFPRRDESEYDAFGTAHSSTSIS 122

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           A LGMAVA   +GK+  +V VI +G   AG A+EA++NAG +D+N++VILND+  S+   
Sbjct: 123 AALGMAVASQWEGKKRSVVAVIGDGAMSAGMAFEALNNAGAMDTNLLVILNDNDMSI--- 179

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                   + AL++ L+R+ S + +   R   + M   +   + E A + +E+ +GM+ P
Sbjct: 180 -----SRPVGALNNYLARLMSGQFYATARRAGEKMLGVVPHVL-ELAKRAEEHVKGMVTP 233

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             STLFEE G  YIGP+DGH+++ L+S L  + +L   GP  +HVVT   R+    + +E
Sbjct: 234 --STLFEEFGFNYIGPIDGHDLDVLVSTLNNIRNL--RGPQFLHVVT---RKGAGYKAAE 286

Query: 380 AIEKQQEGAS----DSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQ 435
                  G +    D+  +P  +   +Y   F + L   A  D+ +V +   M     + 
Sbjct: 287 DDPILYHGVTRFNPDAGIIPKASVKPSYTQVFGDWLCDMAALDQRLVGITPAMREGSGMV 346

Query: 436 LFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLP 495
            F  ++ +RYFDVG+AEQHAVTF+AGLAC GLKP   I S FLQRAYDQ+++DV  Q LP
Sbjct: 347 RFSHEYADRYFDVGIAEQHAVTFAAGLACDGLKPVVAIYSTFLQRAYDQLIHDVAIQNLP 406

Query: 496 VRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVC 555
           V F I  AGLVG+DGPT  G+FD+T++ C+PN+ VMAPSDE+E   M+ T   ++  P  
Sbjct: 407 VVFAIDRAGLVGADGPTHAGSFDLTYLRCIPNITVMAPSDENECRQMLYTAFQMNT-PAA 465

Query: 556 FRYPRGAIVRTDLPGYRGIP-IEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGI 614
            RYPRG+   + +   + +  + +G+G++  EG ++ALL +G+M+Q CL+A   L     
Sbjct: 466 VRYPRGS--GSGVAQQKEMQMLPLGRGEIRREGAEIALLAFGSMLQPCLEAAEEL----- 518

Query: 615 DVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVKW 673
           + TVA+ RF KPLD  LV  L  NH  L+TVEE ++ GG GS V   ++  G     V  
Sbjct: 519 NATVANMRFVKPLDDDLVASLAANHELLVTVEENTVMGGAGSAVLESLSARG---RTVPV 575

Query: 674 RPIVLPDNYIEHASPTQQLALAGL 697
             + LPD +++   P+Q L+  GL
Sbjct: 576 LQLGLPDTFLDQGDPSQMLSECGL 599


>gi|440742835|ref|ZP_20922157.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae
           BRIP39023]
 gi|440376686|gb|ELQ13349.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae
           BRIP39023]
          Length = 630

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 274/649 (42%), Positives = 383/649 (59%), Gaps = 49/649 (7%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD  + P  L+ L   EL+ LA E+R EL   V +T     + L  +ELT+ALH+VF
Sbjct: 15  TPLLDRADTPHGLRRLGEAELETLADELRLELLYSVGQTGGHFGAGLGVIELTIALHYVF 74

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR+ + TLR+KDG++ +  RSESEYD F  GH   S+
Sbjct: 75  DTPDDRLVWDVGHQAYPHKILTGRRARMSTLRQKDGVAAFPRRSESEYDTFGVGHSSTSI 134

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LGMA+A  ++G     + VI +G   AG A+EA+++A  + ++M+VILND+  S+  
Sbjct: 135 SAALGMAIASRLQGSERKSIAVIGDGALTAGMAFEALNHAPEVAADMLVILNDNDMSI-- 192

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                   ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+GM+ 
Sbjct: 193 ------SRNVGGLSNYLAKILSSRTYSSMREGSKKVLSRL-PGAWEIARRTEEYAKGMLV 245

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---RAE-D 374
           P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +HVVT++ +    AE D
Sbjct: 246 P--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDL--KGPQFLHVVTKKGKGFAPAEVD 301

Query: 375 TQKSEAIEKQQ----EGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
                AI K +      A    S P       Y   F + +   A+ D  +V +   M+ 
Sbjct: 302 PIGYHAITKLEPLNAPAAQKKISAP------KYSGVFGQWICDMADADSRLVGITPAMKE 355

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L  F E+FPERYFDV +AEQHAVT +AG+AC G KP   I S FLQR YDQ+++DV 
Sbjct: 356 GSDLVAFSERFPERYFDVAIAEQHAVTLAAGMACEGSKPVVAIYSTFLQRGYDQLIHDVA 415

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q L V F I  AGLVG DGPT  G+FD++++ C+P M+VM PSDE+EL  +++T   + 
Sbjct: 416 VQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDENELRKLLST-GYLH 474

Query: 551 DRPVCFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
             P   RYPRG    A++   L      P+EIGKG V  +G+ VA+L +G  +     A 
Sbjct: 475 TGPAAVRYPRGTGPNAVIEASLD-----PVEIGKGAVRRQGQGVAILAFGVQL-----AE 524

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG 665
           AL+    +D TV D RF KPLD  LV E   NH  L+T+EE ++ GG G+ VS F+A   
Sbjct: 525 ALVVAEKLDATVIDMRFVKPLDEALVSEAAANHELLVTLEENAVMGGAGAAVSEFLARAN 584

Query: 666 LLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAAT---ALSLLG 711
           +L S +    + LPD Y+EHA P Q L   GL    I A     L+L+G
Sbjct: 585 ILKSVLH---LGLPDVYVEHAKPAQMLTECGLDAQGIEAAINERLALIG 630


>gi|398845183|ref|ZP_10602226.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM84]
 gi|398253837|gb|EJN38951.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM84]
          Length = 633

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 272/646 (42%), Positives = 382/646 (59%), Gaps = 42/646 (6%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD  + P  L+ L   +L+ LA E+R EL   V +T     + L  +ELT+ALH+VF
Sbjct: 15  TPLLDRADTPAGLRRLAEADLETLADELRQELLYTVGQTGGHFGAGLGVIELTIALHYVF 74

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR+ + TLR+KDGI+ +  RSESEYD F  GH   S+
Sbjct: 75  DTPDDRLVWDVGHQAYPHKILTGRRNRMLTLRQKDGIAAFPRRSESEYDTFGVGHSSTSI 134

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LGMA+A  ++      + VI +G   AG A+EA+++A  +D++M+VILND+  S+  
Sbjct: 135 SAALGMAIAARLQNSARKSIAVIGDGALTAGMAFEALNHAQEVDADMLVILNDNDMSI-- 192

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                   ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+GM+ 
Sbjct: 193 ------SRNVGGLSNYLAKILSSRTYSSMREGSKKVLSRL-PGAWEIARRTEEYAKGMLA 245

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---RAE-D 374
           P   TLFEELG  YIGP+DGH++  +I+ L+ +  L   GP  +HVVT++ +    AE D
Sbjct: 246 P--GTLFEELGWNYIGPIDGHDLPTMIATLRNMRDL--KGPQFLHVVTKKGKGFAPAEID 301

Query: 375 TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
                AI K +     +   P       Y   F + L   A  D  +V +   M+    L
Sbjct: 302 PIGYHAITKLEPADKPAAPKPKKASGPKYSAVFGQWLCDMAAADNRLVGITPAMKEGSDL 361

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F E+FP+RYFDV +AEQHAVT +AG+AC G KP   I S FLQRAYDQ+++DV  Q L
Sbjct: 362 VAFSERFPQRYFDVAIAEQHAVTLAAGMACEGSKPVVAIYSTFLQRAYDQLIHDVAVQNL 421

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
            V F I  AGLVG DGPT  G++D++++ C+P M+VM PSDE+EL  M++T   + + P 
Sbjct: 422 DVLFAIDRAGLVGEDGPTHAGSYDLSYLRCIPGMLVMTPSDENELRKMLST-GHLYNGPA 480

Query: 555 CFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLS 610
             RYPRG    A +  DL      P+EIGKG V  +G  VALL +G  +     A AL  
Sbjct: 481 AVRYPRGTGPNAPISGDLD-----PLEIGKGVVRRQGAKVALLVFGVQL-----AEALEV 530

Query: 611 KLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDS 669
              ID TV D RF KPLD  LV EL  +H  L+T+EE +I GG G+ V  F+A   ++  
Sbjct: 531 AERIDATVVDMRFVKPLDEALVLELAGSHELLVTIEENAIMGGAGAAVGEFLASQAVV-- 588

Query: 670 GVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
               +P++   LPD Y+EHA P Q LA  GL    I A+  + + +
Sbjct: 589 ----KPLLHLGLPDIYVEHAKPAQMLAECGLDAAGIEASVTARMAK 630


>gi|422639113|ref|ZP_16702543.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae Cit
           7]
 gi|330951507|gb|EGH51767.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae Cit
           7]
          Length = 630

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 274/649 (42%), Positives = 383/649 (59%), Gaps = 49/649 (7%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD  + P  L+ L   EL+ LA E+R EL   V +T     + L  +ELT+ALH+VF
Sbjct: 15  TPLLDRADTPHGLRRLGEAELETLADELRLELLYSVGQTGGHFGAGLGVIELTIALHYVF 74

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR+ + TLR+KDG++ +  RSESEYD F  GH   S+
Sbjct: 75  DTPDDRLVWDVGHQAYPHKILTGRRARMSTLRQKDGVAAFPRRSESEYDTFGVGHSSTSI 134

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LGMA+A  ++G     + VI +G   AG A+EA+++A  + ++M+VILND+  S+  
Sbjct: 135 SAALGMAIASRLQGSERKSIAVIGDGALTAGMAFEALNHAPEVAADMLVILNDNDMSI-- 192

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                   ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+GM+ 
Sbjct: 193 ------SRNVGGLSNYLAKILSSRTYSSMREGSKKVLSRL-PGAWEIARRTEEYAKGMLV 245

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---RAE-D 374
           P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +HVVT++ +    AE D
Sbjct: 246 P--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDL--KGPQFLHVVTKKGKGFAPAEVD 301

Query: 375 TQKSEAIEKQQ----EGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
                AI K +      A    S P       Y   F + +   A+ D  +V +   M+ 
Sbjct: 302 PIGYHAITKLEPLNAPAAQKKISAP------KYSGVFGQWICDMADADSRLVGITPAMKE 355

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L  F E+FPERYFDV +AEQHAVT +AG+AC G KP   I S FLQR YDQ+++DV 
Sbjct: 356 GSDLVAFSERFPERYFDVAIAEQHAVTLAAGMACEGSKPVVAIYSTFLQRGYDQLIHDVA 415

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q L V F I  AGLVG DGPT  G+FD++++ C+P M+VM PSDE+EL  +++T   + 
Sbjct: 416 VQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDENELRKLLST-GYLH 474

Query: 551 DRPVCFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
             P   RYPRG    A++   L      P+EIGKG V  +G+ VA+L +G  +     A 
Sbjct: 475 TGPAAVRYPRGTGPNAVIEASLD-----PVEIGKGVVRRQGQGVAILAFGVQL-----AE 524

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG 665
           AL+    +D TV D RF KPLD  LV E   NH  L+T+EE ++ GG G+ VS F+A   
Sbjct: 525 ALVVAEKLDATVIDMRFVKPLDEALVSEAAANHELLVTLEENAVMGGAGAAVSEFLARAN 584

Query: 666 LLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAAT---ALSLLG 711
           +L S +    + LPD Y+EHA P Q L   GL    I A     L+L+G
Sbjct: 585 ILKSVLH---LGLPDVYVEHAKPAQMLTECGLDAQGIEAAINERLALIG 630


>gi|312602677|ref|YP_004022522.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia rhizoxinica
           HKI 454]
 gi|312169991|emb|CBW77003.1| 1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7) [Burkholderia
           rhizoxinica HKI 454]
          Length = 655

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 272/642 (42%), Positives = 383/642 (59%), Gaps = 47/642 (7%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           T +L  +++P +L+SL+  +LK LA E+R+ +   VS+T   L S+L  VELT+ALH+VF
Sbjct: 23  TLLLPTIDHPAQLRSLSCTDLKALANELRAFVLDSVSRTGGHLSSNLGTVELTIALHYVF 82

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+I+WDVG QTY HKILTGRR  + TLR+ +GISG+  RSES++D F   H   S+
Sbjct: 83  DTPKDRIVWDVGHQTYPHKILTGRRDQMSTLRQWNGISGFPRRSESQFDAFGTAHSSTSI 142

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLH 257
           SA LGMAVA  +KG+    + VI +G   AG+A+EA++NAG   D  ++V+LND+  S+ 
Sbjct: 143 SAALGMAVASQLKGEHHRAIAVIGDGAMTAGEAFEALNNAGVCEDIPLLVVLNDNDMSIS 202

Query: 258 PKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMI 317
           P         + AL+  L ++ S + +   +E   G+ K +   M  +A K++E+A+GM+
Sbjct: 203 PP--------VGALNQYLVKLMSGRFYANAKE---GVRKILPLPMLAFAHKLEEHAKGMV 251

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQK 377
            P  +TLFEE G  YIGP+DGH+++ LI  LQ +  L   GP  +HVVT   ++ +  + 
Sbjct: 252 TP--ATLFEEFGFNYIGPIDGHDLDALIPTLQNIRGL--RGPQFLHVVT---KKGQGYKL 304

Query: 378 SEAIEKQQEGASDSNSL----PFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
           +EA      G    N      P  +  +TY   F E L   AE D  +V +   M     
Sbjct: 305 AEADPVLYHGPGKFNPAEGIKPAASSKKTYTQVFGEWLCDAAELDPRVVGITPAMREGSG 364

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L  F+++FP+RYFDVG+AEQHAVTF+ GLA  GLKP   I S FLQR YDQ+++DV  Q 
Sbjct: 365 LVEFEQRFPQRYFDVGIAEQHAVTFAGGLAAEGLKPVVAIYSTFLQRGYDQLIHDVALQN 424

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPV F +  AGLVG+DG T  GA+D+ ++ C+PNM+VMAP+DE+E   M+ T   I+  P
Sbjct: 425 LPVVFALARAGLVGADGATHAGAYDMAYLRCIPNMVVMAPADENECRQMLHTGLQIEG-P 483

Query: 554 VCFRYPRGAIVRTDLPGY----RGIPIEIGKGKVLVE-----GKDVALLGYGAMVQNCLK 604
              RYPRG       PG     R   + +GKG++  +     G  VA+L +G+M+     
Sbjct: 484 SAVRYPRGTG-----PGVATHKRLSAMPVGKGEIRRQSQAPAGHRVAILAFGSML----- 533

Query: 605 ARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIAL 663
           A +L +    D TVA+ RF KPLD  LVR+L   H  L+TVEEG++ GG GS V+  +A 
Sbjct: 534 APSLTAAQEFDATVANMRFVKPLDEALVRQLADTHELLVTVEEGTLMGGAGSAVAEALAC 593

Query: 664 DGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAAT 705
            G L   V    + LPD +I+H    QQLA  GL    IAA+
Sbjct: 594 HGKL---VPLMQLGLPDTFIDHGDAAQQLASVGLDATGIAAS 632


>gi|115358001|ref|YP_775139.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia ambifaria
           AMMD]
 gi|122321876|sp|Q0BAL8.1|DXS_BURCM RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|115283289|gb|ABI88805.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia ambifaria
           AMMD]
          Length = 646

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 277/641 (43%), Positives = 381/641 (59%), Gaps = 46/641 (7%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L  +++P  L+ L  ++L+ LA E+R+ +   VSKT   L S+L  VELT+ALH+VF+ 
Sbjct: 16  LLKTIDDPADLRRLDRRQLQPLADELRAFVLDSVSKTGGHLSSNLGTVELTIALHYVFNT 75

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+I+WDVG QTY HKILTGRR  +H+LR+ DGISG+  RSESEYD F   H   S+SA
Sbjct: 76  PNDRIVWDVGHQTYPHKILTGRRDQMHSLRQYDGISGFPRRSESEYDTFGTAHSSTSISA 135

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPK 259
            LGMA+   + G     + VI +G   AG A+EAM+NAG   D+ ++VILND+  S+ P 
Sbjct: 136 ALGMAIGSQLNGDDRFSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDNDMSISP- 194

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                   + AL+  L+R+ S + +   R   + +   +   + E A K++E+A+GM+ P
Sbjct: 195 -------PVGALNRHLARLMSGRFYAAARAGVERVLS-VAPPVLELARKLEEHAKGMVVP 246

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             +TLFEE G  YIGP+DGH+++ LI  LQ +  L   GP  +HVVT   ++ +  + +E
Sbjct: 247 --ATLFEEFGFNYIGPIDGHDLDSLIPTLQNIREL--RGPQFLHVVT---KKGQGYKLAE 299

Query: 380 AIEKQQEGASDSNSLPFGNYS-----RTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
           A      G    N       S     +TY   F E L  EAE+D  +V +   M     +
Sbjct: 300 ADPVLYHGPGKFNPAEGIKPSPTPAKKTYTQVFGEWLCDEAERDSRVVGITPAMREGSGM 359

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F+++F +RY+DVG+AEQHAVTF+ GLA  GLKP   I S FLQRAYDQ+++DV  Q L
Sbjct: 360 VEFEKRFKDRYYDVGIAEQHAVTFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNL 419

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PV F I  AGLVG+DG T  GA+D+ FM C+PNM +MA SDE+E   M+ T A     P 
Sbjct: 420 PVVFAIDRAGLVGADGATHAGAYDLAFMRCIPNMTIMAASDENECRQMLHT-ALQQPNPT 478

Query: 555 CFRYPRGAIVR-TDLPGYRGIPIEIGKGKVL-----VEGKDVALLGYGAMVQNCLKARAL 608
             RYPRGA      +  +  IP  +GKG+V       EGK VA+L +G MV   L A   
Sbjct: 479 AVRYPRGAGTGVATVKEFTEIP--LGKGEVRRRTSQPEGKRVAILAFGTMVAPSLAAGEE 536

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLL 667
           L     D TVA+ RF KP+D  LVREL + H +L+TVEEG + GG GS       ++ L+
Sbjct: 537 L-----DATVANMRFVKPIDAALVRELAETHDYLVTVEEGCVMGGAGS-----ACVEALM 586

Query: 668 DSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAAT 705
           +SGV  RP++   LPD +I+H  P + LA  GL G  IA +
Sbjct: 587 ESGV-IRPVIQLGLPDQFIDHGDPAKLLAQCGLDGAGIAKS 626


>gi|399522390|ref|ZP_10763054.1| dxs [Pseudomonas pseudoalcaligenes CECT 5344]
 gi|399109824|emb|CCH39615.1| dxs [Pseudomonas pseudoalcaligenes CECT 5344]
          Length = 631

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 268/625 (42%), Positives = 372/625 (59%), Gaps = 32/625 (5%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD    P  L+ L   +L+ LA E+R  L   V ++     + L  +ELT+ALH+VF
Sbjct: 15  TPLLDSANTPDELRRLAEADLETLADELRQYLLYSVGQSGGHFGAGLGVIELTIALHYVF 74

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR  + +LR+K G++ +  RSESEYD F  GH   S+
Sbjct: 75  DTPDDRLVWDVGHQAYPHKILTGRRERMGSLRQKHGLAAFPRRSESEYDTFGVGHSSTSI 134

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LGMA+A  +KG++   V VI +G   AG A+EA+++A  + +NM+VILND+  S+  
Sbjct: 135 SAALGMAIAARLKGEKRKSVAVIGDGALTAGMAFEALNHATDVGANMLVILNDNDMSI-- 192

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                   ++  LS+ L++I SS+++  +RE +K +  R+  G  E A KV+E+A+GM+ 
Sbjct: 193 ------SKNVGGLSNYLAKIISSRTYASMREGSKKILSRL-PGAWEIARKVEEHAKGMLV 245

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR----RAED 374
           P   TLFEELG  Y+GP+DGH++  L++ L+ +  L   GP  +HVVT++ +       D
Sbjct: 246 P--GTLFEELGWNYVGPIDGHDLPTLLATLRNMRDLD--GPQFLHVVTKKGKGFAPAEAD 301

Query: 375 TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
                AI K +       + P       Y + F + L   A  D  +V +   M+    L
Sbjct: 302 PIGYHAITKLE--PVPPVAAPKQPSGPKYSNVFGQWLCDMAAADNRLVGITPAMKEGSDL 359

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F E+FPERYFDV +AEQHAVT +AG+AC G KP   I S FLQRAYDQ+++DV  Q L
Sbjct: 360 VAFSERFPERYFDVAIAEQHAVTLAAGMACEGAKPVVAIYSTFLQRAYDQLIHDVAVQHL 419

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
            V F I  AGLVG DGPT  G+FD++++ C+P M+VM PSDE+EL  M+ T   + D P 
Sbjct: 420 DVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDENELRRML-TTGHLFDGPA 478

Query: 555 CFRYPRGAIVRTDLPGYRGI-PIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
             RYPRG     + P   G+ P+EIGK  V  +GK VALL +G  +   L+    L    
Sbjct: 479 AVRYPRG--TGPNAPLDAGLEPLEIGKAVVRRQGKGVALLAFGVQLAEALRVGETL---- 532

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVK 672
            D TV D RF KPLD  L+REL  +H  L+T+EE SI GG GS VS F A + +    + 
Sbjct: 533 -DATVVDMRFVKPLDEALLRELAGSHELLVTIEENSIMGGAGSAVSEFFAAENIQ---LP 588

Query: 673 WRPIVLPDNYIEHASPTQQLALAGL 697
              + LPD Y+EHA P+Q LA  GL
Sbjct: 589 MLHLGLPDYYVEHAKPSQMLAECGL 613


>gi|171320201|ref|ZP_02909261.1| deoxyxylulose-5-phosphate synthase [Burkholderia ambifaria MEX-5]
 gi|171094553|gb|EDT39607.1| deoxyxylulose-5-phosphate synthase [Burkholderia ambifaria MEX-5]
          Length = 634

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 277/641 (43%), Positives = 381/641 (59%), Gaps = 46/641 (7%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L  +++P  L+ L  ++L+ LA E+R+ +   VSKT   L S+L  VELT+ALH+VF+ 
Sbjct: 4   LLKTIDDPADLRRLDRRQLQPLADELRAFVLDSVSKTGGHLSSNLGTVELTIALHYVFNT 63

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+I+WDVG QTY HKILTGRR  +H+LR+ DGISG+  RSESEYD F   H   S+SA
Sbjct: 64  PNDRIVWDVGHQTYPHKILTGRRDQMHSLRQYDGISGFPRRSESEYDTFGTAHSSTSISA 123

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPK 259
            LGMA+   + G     + VI +G   AG A+EAM+NAG   D+ ++VILND+  S+ P 
Sbjct: 124 ALGMAIGSQLNGDDRFSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDNDMSISP- 182

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                   + AL+  L+R+ S + +   R   + +   +   + E A K++E+A+GM+ P
Sbjct: 183 -------PVGALNRHLARLMSGRFYAAARAGVERVLS-VAPPVLELARKLEEHAKGMVVP 234

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             +TLFEE G  YIGP+DGH+++ LI  LQ +  L   GP  +HVVT   ++ +  + +E
Sbjct: 235 --ATLFEEFGFNYIGPIDGHDLDSLIPTLQNIREL--RGPQFLHVVT---KKGQGYKLAE 287

Query: 380 AIEKQQEGASDSNSLPFGNYS-----RTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
           A      G    N       S     +TY   F E L  EAE+D  +V +   M     +
Sbjct: 288 ADPVLYHGPGKFNPAEGIKPSPTPAKKTYTQVFGEWLCDEAERDSRVVGITPAMREGSGM 347

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F+++F +RY+DVG+AEQHAVTF+ GLA  GLKP   I S FLQRAYDQ+++DV  Q L
Sbjct: 348 VEFEKRFKDRYYDVGIAEQHAVTFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNL 407

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PV F I  AGLVG+DG T  GA+D+ FM C+PNM +MA SDE+E   M+ T A     P 
Sbjct: 408 PVVFAIDRAGLVGADGATHAGAYDLAFMRCIPNMTIMAASDENECRQMLHT-ALQQPNPT 466

Query: 555 CFRYPRGAIVR-TDLPGYRGIPIEIGKGKVL-----VEGKDVALLGYGAMVQNCLKARAL 608
             RYPRGA      +  +  IP  +GKG+V       EGK VA+L +G MV   L A   
Sbjct: 467 AVRYPRGAGTGVATVKEFTEIP--LGKGEVRRRTSQPEGKRVAILAFGTMVAPSLAAGEE 524

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLL 667
           L     D TVA+ RF KP+D  LVREL + H +L+TVEEG + GG GS       ++ L+
Sbjct: 525 L-----DATVANMRFVKPIDAALVRELAETHDYLVTVEEGCVMGGAGS-----ACVEALM 574

Query: 668 DSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAAT 705
           +SGV  RP++   LPD +I+H  P + LA  GL G  IA +
Sbjct: 575 ESGV-IRPVIQLGLPDQFIDHGDPAKLLAQCGLDGAGIAKS 614


>gi|119897489|ref|YP_932702.1| 1-deoxy-D-xylulose-5-phosphate synthase [Azoarcus sp. BH72]
 gi|166198599|sp|A1K4R0.1|DXS_AZOSB RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|119669902|emb|CAL93815.1| probable 1-deoxy-D-xylulose 5-phosphate synthase [Azoarcus sp.
           BH72]
          Length = 619

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 270/635 (42%), Positives = 369/635 (58%), Gaps = 50/635 (7%)

Query: 78  PTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHV 137
           P P L+ + +P  L++   +EL Q+A E+R+ L   VSKT   L S+L  VELT+ALH+V
Sbjct: 3   PYPHLERIGSPADLRATERRELAQVASELRAFLIESVSKTGGHLSSNLGTVELTIALHYV 62

Query: 138 FHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNS 197
           F+ P D+I+WDVG QTY HKILTGRR  +  LR   GISG+  R ESEYD F   H   S
Sbjct: 63  FNTPDDRIVWDVGHQTYGHKILTGRREAMSGLRHWGGISGFPRRCESEYDTFGTAHSSTS 122

Query: 198 VSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLH 257
           +SA LGMAVA   +G+    + VI +G   AG A+EA++NAG +D+N++VILND+  S+ 
Sbjct: 123 ISAALGMAVAARDRGEDRRAIAVIGDGAMSAGMAFEALNNAGDMDANLLVILNDNEMSIS 182

Query: 258 PKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMI 317
           P         + AL+  L+R+ S  ++   R V + +   +   M E A KV+EYA+GMI
Sbjct: 183 PP--------VGALTKILARLMSGSTYNAARRVGEKVLGTV-PPMAELARKVEEYAKGMI 233

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAE---- 373
            P   TLFEE G +Y GP+DGH+++ LI  LQ +  L   GP  +HV+T++ +  +    
Sbjct: 234 AP--GTLFEEFGFHYYGPIDGHDLDALIPTLQNIRKL--KGPQFLHVITKKGQGYKLAEA 289

Query: 374 DTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
           D      + K    A        G    TY   F + L   A  D  IV +   M     
Sbjct: 290 DPILYHGVSKFDHTAGIQTGKSGGKL--TYTQVFSDWLCDIAAADPRIVGITPAMREGSG 347

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L  F ++FP+RY+DVG+AEQHA+TF+AGLAC GLKP   I S FLQRAYDQ+++D+  Q 
Sbjct: 348 LVEFAQRFPDRYYDVGIAEQHALTFAAGLACEGLKPVVAIYSTFLQRAYDQLIHDIALQN 407

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPV   I   GLVG+DG T  GAFD++F++C+PN++VMAP+DE+E   M+ T A   D P
Sbjct: 408 LPVVLAIDRGGLVGADGATHHGAFDLSFLACVPNLVVMAPADENECRQMLYT-AVCHDGP 466

Query: 554 VCFRYPRGAIVRTDLPGYRGIPIE------IGKGKVLVEGKDVALLGYGAMVQNCLKARA 607
              RYPRG        G   +P+E      IGKG++   G  +A+L +G+M+   L+   
Sbjct: 467 TAVRYPRGG-------GSGVVPLEPMTALPIGKGEIRRHGTRIAVLAFGSMLGVALEVGE 519

Query: 608 LLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-IGGFGSHVSHFIALDGL 666
            L     D +VA+ RF KPLD  L+ EL  NH  L+TVEE + IGG GS V+ F+     
Sbjct: 520 AL-----DASVANMRFVKPLDEALIAELAANHALLVTVEENAVIGGAGSEVARFV----- 569

Query: 667 LDSGVKWRPIV----LPDNYIEHASPTQQLALAGL 697
               +  RP V    LPD +I+H    Q LA  GL
Sbjct: 570 --DTLPQRPRVLRLGLPDRFIDHGDQAQLLASVGL 602


>gi|421503887|ref|ZP_15950832.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas mendocina
           DLHK]
 gi|400345391|gb|EJO93756.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas mendocina
           DLHK]
          Length = 631

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 267/628 (42%), Positives = 380/628 (60%), Gaps = 38/628 (6%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD    P  L+ L   +L+ LA E+R  L   V ++     + L  +ELT+ALH+VF
Sbjct: 15  TPLLDSANTPDELRRLAEADLETLADELRQYLLYSVGQSGGHFGAGLGVIELTIALHYVF 74

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR  + +LR+KDG++ +  RSESEYD F  GH   S+
Sbjct: 75  DTPDDRLVWDVGHQAYPHKILTGRRERMGSLRQKDGLAAFPRRSESEYDTFGVGHSSTSI 134

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LGMA+A  +KG++   V VI +G   AG A+EA+++A  +++NM+VILND+  S+  
Sbjct: 135 SAALGMAIAARLKGEKRKSVAVIGDGALTAGMAFEALNHATDVNANMLVILNDNDMSI-- 192

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                   ++  LS+ L++I SS+++  +RE +K +  R+  G  E A KV+E+A+GM+ 
Sbjct: 193 ------SKNVGGLSNYLAKIISSRTYASMREGSKKILSRL-PGAWEIARKVEEHAKGMLV 245

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR----RAED 374
           P   TLFEELG  Y+GP+DGH++  L++ L+ +  L   GP  +HVVT++ +       D
Sbjct: 246 P--GTLFEELGWNYVGPIDGHDLPILLATLRNMRDLD--GPQFLHVVTKKGKGFAPAEAD 301

Query: 375 TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
                AI K +      +++P       Y + F + L   A  D+ +V +   M+    L
Sbjct: 302 PIGYHAITKLE--PVTPSAVPRKPSGPKYSNVFGQWLCDMAAADQRLVGITPAMKEGSDL 359

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F E+FPERYFDV +AEQHAVT +AG+AC G+KP   I S FLQRAYDQ+++DV  Q L
Sbjct: 360 VAFAERFPERYFDVAIAEQHAVTLAAGMACDGVKPVVAIYSTFLQRAYDQLIHDVAVQNL 419

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
            V F I  AGLVG DGPT  G+FDI+++ C+P M+VM PSDE+EL  M+ T   +   P 
Sbjct: 420 DVLFAIDRAGLVGEDGPTHAGSFDISYLRCIPGMLVMTPSDENELRRML-TTGYLFAGPA 478

Query: 555 CFRYPRGAIVRTDLPGYRGI-PIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
             RYPRG+    + P   G+ P+EIGK  V  +GK  ALL +G  +     A AL     
Sbjct: 479 AVRYPRGS--GPNAPLDAGLEPLEIGKAVVRRQGKGAALLVFGVQL-----AEALQVGEA 531

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVK 672
           ++ TV D RF KPLD  L+REL  +H  L+T+EE ++ GG GS VS F+A   ++     
Sbjct: 532 LNATVVDMRFVKPLDEALLRELAGSHELLVTIEENAVMGGAGSAVSEFLAAQNII----- 586

Query: 673 WRPIV---LPDNYIEHASPTQQLALAGL 697
            +P++   LPD Y+EHA P Q LA  GL
Sbjct: 587 -KPLLHLGLPDYYVEHAKPAQMLAECGL 613


>gi|422296713|ref|ZP_16384378.1| deoxyxylulose-5-phosphate synthase [Pseudomonas avellanae BPIC 631]
 gi|407992058|gb|EKG33763.1| deoxyxylulose-5-phosphate synthase [Pseudomonas avellanae BPIC 631]
          Length = 631

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 277/645 (42%), Positives = 387/645 (60%), Gaps = 40/645 (6%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD  + P  L+ L   EL+ LA E+R EL   V +T     + L  +ELT+ALH+VF
Sbjct: 15  TPLLDQADTPHGLRRLGEAELETLADELRLELLYSVGQTGGHFGAGLGVIELTIALHYVF 74

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR+ + TLR+KDG++ +  RSESEYD F  GH   S+
Sbjct: 75  DTPDDRLVWDVGHQAYPHKILTGRRARMSTLRQKDGVAAFPRRSESEYDTFGVGHSSTSI 134

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LGMA+A  ++G     + VI +G   AG A+EA+++A  + +NM+VILND+  S+  
Sbjct: 135 SAALGMAIASRLQGSERKSIAVIGDGALTAGMAFEALNHAPEVAANMLVILNDNDMSI-- 192

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                   ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+GM+ 
Sbjct: 193 ------SRNVGGLSNYLAKILSSRTYTSMREGSKKVLSRL-PGAWEIARRTEEYAKGMLV 245

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---RAE-D 374
           P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +HVVT++ +    AE D
Sbjct: 246 P--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDL--KGPQFLHVVTKKGKGFAPAEVD 301

Query: 375 TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
                AI K  E  +   S+     S  Y   F + +   AE D  +V +   M+    L
Sbjct: 302 PIGYHAITK-LEPLNAPVSVQKKVSSPKYSGVFGQWICDMAEVDSRLVGITPAMKEGSDL 360

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F E+FPERYFDV +AEQHAVT +AG+AC G KP   I S FLQR YDQ+V+DV  Q L
Sbjct: 361 VDFSERFPERYFDVAIAEQHAVTLAAGMACEGSKPVVAIYSTFLQRGYDQLVHDVAVQNL 420

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
            V F I  AGLVG DGPT  G+FD++++ C+P ++VM PSDE+EL  +++T   +   P 
Sbjct: 421 DVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGIVVMTPSDENELRKLLST-GYLHTGPA 479

Query: 555 CFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLS 610
             RYPRG    A++  +L      P+EIGKG V  +G+ VA+L +G  +     A AL+ 
Sbjct: 480 AVRYPRGTGPNAVIEANLD-----PVEIGKGVVRRQGQGVAILVFGVQL-----AEALVV 529

Query: 611 KLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDS 669
              ++ TV D RF KPLD  LVRE   +H  L+T+EE ++ GG G+ VS F+A   +L S
Sbjct: 530 AEKLNATVIDMRFVKPLDEALVRETAASHQLLVTLEENAVMGGAGAAVSEFLARANILKS 589

Query: 670 GVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATA---LSLLG 711
            +    + LPD Y+EHA P Q LA  GL    I A     LSL+G
Sbjct: 590 VLH---LGLPDVYVEHAKPAQMLAECGLDVDGIEAAINERLSLIG 631


>gi|172062808|ref|YP_001810459.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia ambifaria
           MC40-6]
 gi|229813264|sp|B1Z1G2.1|DXS_BURA4 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|171995325|gb|ACB66243.1| deoxyxylulose-5-phosphate synthase [Burkholderia ambifaria MC40-6]
          Length = 634

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 277/641 (43%), Positives = 381/641 (59%), Gaps = 46/641 (7%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L  +++P  L+ L  ++L+ LA E+R+ +   VSKT   L S+L  VELT+ALH+VF+ 
Sbjct: 4   LLKTIDDPADLRRLDRRQLQPLADELRAFVLDSVSKTGGHLSSNLGTVELTIALHYVFNT 63

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+I+WDVG QTY HKILTGRR  +H+LR+ DGISG+  RSESEYD F   H   S+SA
Sbjct: 64  PNDRIVWDVGHQTYPHKILTGRRDQMHSLRQYDGISGFPRRSESEYDTFGTAHSSTSISA 123

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPK 259
            LGMA+   + G     + VI +G   AG A+EAM+NAG   D+ ++VILND+  S+ P 
Sbjct: 124 ALGMAIGSQLNGDDRFSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDNDMSISP- 182

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                   + AL+  L+R+ S + +   R   + +   +   + E A K++E+A+GM+ P
Sbjct: 183 -------PVGALNRHLARLMSGRFYAAARAGVERVLS-VAPPVLELARKLEEHAKGMVVP 234

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             +TLFEE G  YIGP+DGH+++ LI  LQ +  L   GP  +HVVT   ++ +  + +E
Sbjct: 235 --ATLFEEFGFNYIGPIDGHDLDSLIPTLQNIREL--RGPQFLHVVT---KKGQGYKLAE 287

Query: 380 AIEKQQEGASDSNSLPFGNYS-----RTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
           A      G    N       S     +TY   F E L  EAE+D  +V +   M     +
Sbjct: 288 ADPVLYHGPGKFNPAEGIKPSPTPAKKTYTQVFGEWLCDEAERDSRVVGITPAMREGSGM 347

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F+++F +RY+DVG+AEQHAVTF+ GLA  GLKP   I S FLQRAYDQ+++DV  Q L
Sbjct: 348 VEFEKRFKDRYYDVGIAEQHAVTFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNL 407

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PV F I  AGLVG+DG T  GA+D+ FM C+PNM +MA SDE+E   M+ T A     P 
Sbjct: 408 PVVFAIDRAGLVGADGATHAGAYDLAFMRCIPNMTIMAASDENECRQMLHT-ALQQPNPT 466

Query: 555 CFRYPRGAIVR-TDLPGYRGIPIEIGKGKVL-----VEGKDVALLGYGAMVQNCLKARAL 608
             RYPRGA      +  +  IP  +GKG+V       EGK VA+L +G MV   L A   
Sbjct: 467 AVRYPRGAGTGVATVKEFTEIP--LGKGEVRRRTSQPEGKRVAILAFGTMVAPSLAAGEE 524

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLL 667
           L     D TVA+ RF KP+D  LVREL + H +L+TVEEG + GG GS       ++ L+
Sbjct: 525 L-----DATVANMRFVKPVDAALVRELAETHDYLVTVEEGCVMGGAGS-----ACVEALM 574

Query: 668 DSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAAT 705
           +SGV  RP++   LPD +I+H  P + LA  GL G  IA +
Sbjct: 575 ESGV-IRPVIQLGLPDQFIDHGDPAKLLAQCGLDGAGIAKS 614


>gi|386010187|ref|YP_005928464.1| hypothetical protein PPUBIRD1_0567 [Pseudomonas putida BIRD-1]
 gi|313496893|gb|ADR58259.1| Dxs [Pseudomonas putida BIRD-1]
          Length = 631

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 271/639 (42%), Positives = 382/639 (59%), Gaps = 44/639 (6%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD  + P  L+ L   +L+ LA E+R EL   V +T     + L  +ELT+ALH+VF
Sbjct: 15  TPLLDRADTPAGLRRLAEADLETLADELRQELLYTVGQTGGHFGAGLGVIELTIALHYVF 74

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR+ + +LR+KDGI+ +  RSESEYD F  GH   S+
Sbjct: 75  DTPDDRLVWDVGHQAYPHKILTGRRNRMLSLRQKDGIAAFPRRSESEYDTFGVGHSSTSI 134

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LGMA+A  ++      + VI +G   AG A+EA+++A  ++++M+VILND+  S+  
Sbjct: 135 SAALGMAIAARLQNSARKSIAVIGDGALTAGMAFEALNHAQEVNADMLVILNDNDMSI-- 192

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                   ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+GM+ 
Sbjct: 193 ------SRNVGGLSNYLAKILSSRTYASMREGSKKVLSRL-PGAWEIARRTEEYAKGMLV 245

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---RAE-D 374
           P   TLFEELG  YIGP+DGH++  +I+ L+ +  L   GP  +HVVT++ +    AE D
Sbjct: 246 P--GTLFEELGWNYIGPIDGHDLPTMIATLRNMRDL--KGPQFLHVVTKKGKGFAPAEID 301

Query: 375 TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
                AI K +   +D  + P       Y   F + L   A  D  +V +   M+    L
Sbjct: 302 PIGYHAITKLE--PADKPAAPKKASGPKYSAVFGQWLCDMAAADNRLVGITPAMKEGSDL 359

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F E++PERYFDV +AEQHAVT +AG+AC G KP   I S FLQRAYDQ+++DV  Q L
Sbjct: 360 VDFSERYPERYFDVAIAEQHAVTLAAGMACEGSKPVVAIYSTFLQRAYDQLIHDVAVQNL 419

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
            V F I  AGLVG DGPT  G++D++++ C+P M+VM PSDE+EL  M++T   + + P 
Sbjct: 420 DVLFAIDRAGLVGEDGPTHAGSYDLSYLRCIPGMLVMTPSDENELRKMLST-GHLYNGPA 478

Query: 555 CFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLS 610
             RYPRG    A +  DL      P+EIGKG V  +G+ VALL +G  +     A A+  
Sbjct: 479 AVRYPRGTGPNAPISGDLQ-----PLEIGKGVVRRQGEKVALLVFGVQL-----AEAMQV 528

Query: 611 KLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDS 669
              I+ TV D RF KPLD  LV EL  NH  L+T+EE +I GG G+ V  F+A   +L  
Sbjct: 529 AEQINATVVDMRFVKPLDEALVLELAGNHELLVTIEENAIMGGAGAAVGEFLASQAVL-- 586

Query: 670 GVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAAT 705
               +P++   LPD Y+EHA P Q LA  GL    I A+
Sbjct: 587 ----KPLLHLGLPDIYVEHAKPAQMLAECGLDAAGIEAS 621


>gi|429211673|ref|ZP_19202838.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. M1]
 gi|428156155|gb|EKX02703.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. M1]
          Length = 636

 Score =  464 bits (1195), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 267/633 (42%), Positives = 375/633 (59%), Gaps = 40/633 (6%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           ++  TP+LD    P+ L+ L   EL  LA E+R  L   V +T     + L  +ELT+AL
Sbjct: 11  ERPATPLLDRANTPVELRRLGEAELVSLADELRQYLLYSVGQTGGHFGAGLGVIELTIAL 70

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H+VF  P D+++WDVG Q Y HKILTGRR  + TLR+KDG++ +  RSESEYD F  GH 
Sbjct: 71  HYVFDTPDDRLVWDVGHQAYPHKILTGRRERMGTLRQKDGLAAFPRRSESEYDTFGVGHS 130

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA LGMA+A  ++G     V VI +G   AG A+EA+++A  + ++M+VILND+  
Sbjct: 131 STSISAALGMAIAARMQGSGRKSVAVIGDGALTAGMAFEALNHASDVQADMLVILNDNDM 190

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+          ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+
Sbjct: 191 SI--------SHNVGGLSNYLAKILSSRTYSSMREGSKKVLSRL-PGAWEIARRTEEYAK 241

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---- 370
           GM+ P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +HVVT++ +    
Sbjct: 242 GMLVP--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDL--KGPQFLHVVTKKGKGFAP 297

Query: 371 RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
              D     AI K +     + + P       Y + F + L   A +D  +V +   M+ 
Sbjct: 298 AEADPIGYHAITKLEP----AGAAPKKAGGPKYSNVFGQWLCDMASQDPRLVGITPAMKE 353

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L  F E+FPERYFDV +AEQHAVT +AG+AC G+KP   I S FLQR YDQ+++DV 
Sbjct: 354 GSDLVAFAERFPERYFDVAIAEQHAVTLAAGMACDGIKPVVAIYSTFLQRGYDQLIHDVA 413

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q L V F I  AGLVG DGPT  G+FD++++ C+P M+VM PSDEDEL  ++ T   + 
Sbjct: 414 VQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDEDELRKLL-TTGYLF 472

Query: 551 DRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGK--DVALLGYGAMVQNCLKARAL 608
             P   RYPRG+   T +      P+EIGKG +  +GK   VA+L +G  +     A AL
Sbjct: 473 QGPAAVRYPRGSGPNTPIDPTLA-PVEIGKGVLRRQGKAGKVAILAFGVQL-----AEAL 526

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLL 667
                 D TVAD RF KPLD  LVREL  +H  L+T+EE ++ GG G+ V  F+A +   
Sbjct: 527 QVAERFDATVADMRFVKPLDEALVRELADSHELLVTIEENAVMGGAGAAVGEFLAREN-- 584

Query: 668 DSGVKWRPIV---LPDNYIEHASPTQQLALAGL 697
               + +P++   LPD Y+EHA P Q LA  GL
Sbjct: 585 ----RQQPLLHLGLPDYYVEHAKPAQMLAECGL 613


>gi|397688272|ref|YP_006525591.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas stutzeri DSM
           10701]
 gi|395809828|gb|AFN79233.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas stutzeri DSM
           10701]
          Length = 629

 Score =  464 bits (1195), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 275/643 (42%), Positives = 386/643 (60%), Gaps = 38/643 (5%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TPILD    P +L+ L   EL++LA E+R +L   V +T     + L  +ELT+ALH+VF
Sbjct: 15  TPILDRAATPAQLRRLGEAELEELANELRQDLLFSVGQTGGHFGAGLGVIELTIALHYVF 74

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR  + +LR+KDG++ +  R ESEYD F  GH   S+
Sbjct: 75  DTPDDRLVWDVGHQAYPHKILTGRREGMASLRQKDGLAAFPRRCESEYDTFGVGHSSTSI 134

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
            A LGMA+A  ++G++   + VI +G   AG A+EA+++A  + ++M+V+LND+  S+  
Sbjct: 135 GAALGMAIAARLQGQQRKSIAVIGDGALTAGMAFEALNHAPEVGADMLVVLNDNDMSI-- 192

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                   ++  +S+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+GM+ 
Sbjct: 193 ------SRNVGGMSNYLAKILSSRTYSSMREGSKKVLSRL-PGAWEIARRTEEYAKGMLV 245

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---RAE-D 374
           P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +HVVT++ +    AE D
Sbjct: 246 P--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLS--GPQFLHVVTKKGKGFAPAEVD 301

Query: 375 TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
                AI K +    D+   P       Y + F + L   AE D  +  +   M+    L
Sbjct: 302 PITWHAINKLE--PLDAPKKPKAPSGPRYSNVFGQWLCDMAEVDARLTGITPAMKEGSDL 359

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F E+FPERYFDV +AEQHAVT +AG+AC G KP   I S FLQRAYDQ+++DV  Q L
Sbjct: 360 VAFAERFPERYFDVAIAEQHAVTLAAGMACEGAKPVVAIYSTFLQRAYDQLIHDVAVQNL 419

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
            V F I  AGLVG DGPT  G+FD++++ C+P M+VM PSDE+E+  M+ T   + + P 
Sbjct: 420 DVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDENEMRRML-TTGYLFEGPA 478

Query: 555 CFRYPRGAIVRTDLPGYRGI-PIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
             RYPRG     + P  RG+ P+EIGKG V  +G  VALL +G  +   L     L    
Sbjct: 479 AVRYPRG--TGPNAPIERGLEPLEIGKGVVRRQGSKVALLVFGVQLTEALAVGETL---- 532

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVK 672
            D TV D RF KPLD  LVR+L  +H  L+T+EE SI GG GS V+ F+A +GLL     
Sbjct: 533 -DATVVDMRFVKPLDEALVRQLADSHELLVTIEENSIMGGAGSAVNEFLAREGLL----- 586

Query: 673 WRPIV---LPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
            +PI+   LPD+Y+EHA P Q LA  GL    I A   + L +
Sbjct: 587 -QPILNLGLPDHYVEHAKPAQMLAECGLDEAGIEAAVRARLAK 628


>gi|339495742|ref|YP_004716035.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas stutzeri ATCC
           17588 = LMG 11199]
 gi|338803114|gb|AEJ06946.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas stutzeri ATCC
           17588 = LMG 11199]
          Length = 632

 Score =  464 bits (1195), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 276/648 (42%), Positives = 386/648 (59%), Gaps = 43/648 (6%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD    P +L+ L   EL++LA E+R EL   V +T     + L  +ELT+ALH+V+
Sbjct: 15  TPVLDRAATPEQLRRLGEAELEELANELRQELLYSVGRTGGHFGAGLGVIELTIALHYVY 74

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR  + TLR+KDG++ +  R ESEYD F  GH   S+
Sbjct: 75  DTPDDRLVWDVGHQAYPHKILTGRRERMGTLRQKDGLAAFPRRVESEYDTFGVGHSSTSI 134

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LGMAVA  +KG++   + VI +G   AG A+EA+++A  + +NM+V+LND+  S+  
Sbjct: 135 SAALGMAVAARLKGEQRKSIAVIGDGALTAGMAFEALNHAPEVGANMLVVLNDNDMSI-- 192

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                   ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+GM+ 
Sbjct: 193 ------SRNVGGLSNYLAKILSSRTYSSMREGSKKILSRL-PGAWEIARRTEEYAKGMLV 245

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR----RAED 374
           P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +HVVT++ +       D
Sbjct: 246 P--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLD--GPQFLHVVTKKGKGFAPAEAD 301

Query: 375 TQKSEAIEKQQE-GASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
                AI K +  GA  +   P G     Y + F + L   A  D  +  +   M+    
Sbjct: 302 PITWHAISKLEPVGAPPAPKKPTGP---KYSNVFGQWLCDMAAADPRLTGITPAMKEGSD 358

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L  F E++P+RYFDV +AEQHAVT +AG+AC GLKP   I S FLQRAYDQ+++DV  Q 
Sbjct: 359 LVAFSERYPDRYFDVAIAEQHAVTLAAGMACEGLKPVVAIYSTFLQRAYDQLIHDVAVQN 418

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           L V F I  AGLVG DGPT  G+FD++++ C+P M+VM PSDE+E+  M+ T    +  P
Sbjct: 419 LDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDENEMRRMLTTGYHFEG-P 477

Query: 554 VCFRYPRGAIVRTDL-PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
              RYPRG+     + P     P+EIGK  V  +G  VALL +G  +   L+    L   
Sbjct: 478 AAVRYPRGSGPNASIEPALE--PLEIGKAVVRRQGSKVALLVFGVQLPEALQVGEAL--- 532

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGV 671
             D TV D RF KPLD  L+REL  +H  L+TVEE S+ GG GS V+ F+A +G+L    
Sbjct: 533 --DATVVDMRFVKPLDEALLRELAGSHELLVTVEENSVMGGAGSAVAEFLAAEGVL---- 586

Query: 672 KWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAATA---LSLLGRT 713
             RPI+   LPD Y+EHA P++ LA  GL    I A     L+ LG+ 
Sbjct: 587 --RPILHLGLPDYYVEHAKPSEMLAECGLDAAGIEAAVRKRLAALGKA 632


>gi|161702975|ref|YP_372966.2| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia sp. 383]
 gi|118595497|sp|Q393P4.2|DXS_BURS3 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
          Length = 634

 Score =  464 bits (1195), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 276/641 (43%), Positives = 383/641 (59%), Gaps = 46/641 (7%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L  +++P  L+ L  ++L+ LA E+R+ +   VSKT   L S+L  VELT+ALH+VF+ 
Sbjct: 4   LLKTIDDPADLRRLDRRQLQPLADELRAFVLDSVSKTGGHLSSNLGTVELTIALHYVFNT 63

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+I+WDVG QTY HKILTGRR  +H+LR++DGISG+  RSESEYD F   H   S+SA
Sbjct: 64  PNDRIVWDVGHQTYPHKILTGRRDQMHSLRQQDGISGFPRRSESEYDTFGTAHSSTSISA 123

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPK 259
            LGMA+   + G     + VI +G   AG A+EAM+NAG   D+ ++VILND+  S+ P 
Sbjct: 124 ALGMAIGSQLNGDDRFSIAVIGDGAMTAGMAFEAMNNAGVSEDAKVLVILNDNDMSISP- 182

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                   + AL+  L+R+ S + +   R   + +   +   + E A K++E+A+GM+ P
Sbjct: 183 -------PVGALNRHLARLMSGRFYAAARAGVERVLS-VAPPVLELARKLEEHAKGMVVP 234

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             +TLFEE G  YIGP+DGH+++ LI  LQ +  L   GP  +HVVT   ++ +  + +E
Sbjct: 235 --ATLFEEFGFNYIGPIDGHDLDSLIPTLQNIREL--RGPQFLHVVT---KKGQGYKLAE 287

Query: 380 AIEKQQEGASDSNSLPFGNYS-----RTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
           A      G    N       S     +TY   F E L  EAE+D  +V +   M     +
Sbjct: 288 ADPVLYHGPGKFNPAEGIKPSTTPAKKTYTQVFGEWLCDEAERDTRVVGITPAMREGSGM 347

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F+++F +RY+DVG+AEQHAVTF+ G+A  GLKP   I S FLQRAYDQ+++DV  Q L
Sbjct: 348 VEFEKRFKDRYYDVGIAEQHAVTFAGGMATEGLKPVVAIYSTFLQRAYDQLIHDVALQNL 407

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PV F I  AGLVG+DG T  GA+D+ FM C+PNM +MA SDE+E   M+ T A     P 
Sbjct: 408 PVVFAIDRAGLVGADGATHAGAYDLAFMRCIPNMTIMAASDENECRQMLHT-ALQQPNPT 466

Query: 555 CFRYPRGAIVRTDLPGYRGIP-IEIGKGKVL-----VEGKDVALLGYGAMVQNCLKARAL 608
             RYPRGA   T +P  +    I +GKG+V       EGK VA+L +G MV   L A   
Sbjct: 467 AVRYPRGA--GTGVPTVKEFTEIPLGKGEVRRQTSQPEGKRVAILAFGTMVAPSLAAAEE 524

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLL 667
           L     D TVA+ RF KP+D  LVREL + H +L+TVEEG + GG GS       ++ L+
Sbjct: 525 L-----DATVANMRFVKPVDAALVRELAETHDYLVTVEEGCVMGGAGS-----ACVEALM 574

Query: 668 DSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAAT 705
           +SGV  RP++   LPD +I+H  P + L+  GL G  IA +
Sbjct: 575 ESGV-IRPVLQLGLPDLFIDHGDPAKLLSQCGLDGAGIAKS 614


>gi|77970943|gb|ABB12322.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia sp. 383]
          Length = 646

 Score =  464 bits (1195), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 276/641 (43%), Positives = 383/641 (59%), Gaps = 46/641 (7%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L  +++P  L+ L  ++L+ LA E+R+ +   VSKT   L S+L  VELT+ALH+VF+ 
Sbjct: 16  LLKTIDDPADLRRLDRRQLQPLADELRAFVLDSVSKTGGHLSSNLGTVELTIALHYVFNT 75

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+I+WDVG QTY HKILTGRR  +H+LR++DGISG+  RSESEYD F   H   S+SA
Sbjct: 76  PNDRIVWDVGHQTYPHKILTGRRDQMHSLRQQDGISGFPRRSESEYDTFGTAHSSTSISA 135

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPK 259
            LGMA+   + G     + VI +G   AG A+EAM+NAG   D+ ++VILND+  S+ P 
Sbjct: 136 ALGMAIGSQLNGDDRFSIAVIGDGAMTAGMAFEAMNNAGVSEDAKVLVILNDNDMSISP- 194

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                   + AL+  L+R+ S + +   R   + +   +   + E A K++E+A+GM+ P
Sbjct: 195 -------PVGALNRHLARLMSGRFYAAARAGVERVLS-VAPPVLELARKLEEHAKGMVVP 246

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             +TLFEE G  YIGP+DGH+++ LI  LQ +  L   GP  +HVVT   ++ +  + +E
Sbjct: 247 --ATLFEEFGFNYIGPIDGHDLDSLIPTLQNIREL--RGPQFLHVVT---KKGQGYKLAE 299

Query: 380 AIEKQQEGASDSNSLPFGNYS-----RTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
           A      G    N       S     +TY   F E L  EAE+D  +V +   M     +
Sbjct: 300 ADPVLYHGPGKFNPAEGIKPSTTPAKKTYTQVFGEWLCDEAERDTRVVGITPAMREGSGM 359

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F+++F +RY+DVG+AEQHAVTF+ G+A  GLKP   I S FLQRAYDQ+++DV  Q L
Sbjct: 360 VEFEKRFKDRYYDVGIAEQHAVTFAGGMATEGLKPVVAIYSTFLQRAYDQLIHDVALQNL 419

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PV F I  AGLVG+DG T  GA+D+ FM C+PNM +MA SDE+E   M+ T A     P 
Sbjct: 420 PVVFAIDRAGLVGADGATHAGAYDLAFMRCIPNMTIMAASDENECRQMLHT-ALQQPNPT 478

Query: 555 CFRYPRGAIVRTDLPGYRGIP-IEIGKGKVL-----VEGKDVALLGYGAMVQNCLKARAL 608
             RYPRGA   T +P  +    I +GKG+V       EGK VA+L +G MV   L A   
Sbjct: 479 AVRYPRGA--GTGVPTVKEFTEIPLGKGEVRRQTSQPEGKRVAILAFGTMVAPSLAAAEE 536

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLL 667
           L     D TVA+ RF KP+D  LVREL + H +L+TVEEG + GG GS       ++ L+
Sbjct: 537 L-----DATVANMRFVKPVDAALVRELAETHDYLVTVEEGCVMGGAGS-----ACVEALM 586

Query: 668 DSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAAT 705
           +SGV  RP++   LPD +I+H  P + L+  GL G  IA +
Sbjct: 587 ESGV-IRPVLQLGLPDLFIDHGDPAKLLSQCGLDGAGIAKS 626


>gi|146308858|ref|YP_001189323.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas mendocina ymp]
 gi|166201529|sp|A4XZ25.1|DXS_PSEMY RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|145577059|gb|ABP86591.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas mendocina ymp]
          Length = 631

 Score =  464 bits (1194), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 267/628 (42%), Positives = 379/628 (60%), Gaps = 38/628 (6%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD    P  L+ L   +L+ LA E+R  L   V ++     + L  +ELT+ALH+VF
Sbjct: 15  TPLLDSANTPDELRRLAEADLETLADELRQYLLYSVGQSGGHFGAGLGVIELTIALHYVF 74

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR  + +LR+KDG++ +  RSESEYD F  GH   S+
Sbjct: 75  DTPDDRLVWDVGHQAYPHKILTGRRERMGSLRQKDGLAAFPRRSESEYDTFGVGHSSTSI 134

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LGMA+A  +KG++   V VI +G   AG A+EA+++A  + +NM+VILND+  S+  
Sbjct: 135 SAALGMAIAARLKGEKRKSVAVIGDGALTAGMAFEALNHATDVGANMLVILNDNDMSI-- 192

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                   ++  LS+ L++I SS+++  +RE +K +  R+  G  E A KV+E+A+GM+ 
Sbjct: 193 ------SKNVGGLSNYLAKIISSRTYASMREGSKKILSRL-PGAWEIARKVEEHAKGMLV 245

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR----RAED 374
           P   TLFEELG  Y+GP+DGH++  L++ L+ +  L   GP  +HVVT++ +       D
Sbjct: 246 P--GTLFEELGWNYVGPIDGHDLPTLLATLRNMRDLD--GPQFLHVVTKKGKGFAPAEAD 301

Query: 375 TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
                AI K +      +++P       Y + F + L   A  D+ +V +   M+    L
Sbjct: 302 PIGYHAITKLE--PVTPSAVPRKPSGPKYSNVFGQWLCDMAAADQRLVGITPAMKEGSDL 359

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F E+FPERYFDV +AEQHAVT +AG+AC G+KP   I S FLQRAYDQ+++DV  Q L
Sbjct: 360 VAFAERFPERYFDVAIAEQHAVTLAAGMACDGVKPVVAIYSTFLQRAYDQLIHDVAVQNL 419

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
            V F I  AGLVG DGPT  G+FDI+++ C+P M+VM PSDE+EL  M+ T   + D P 
Sbjct: 420 DVLFAIDRAGLVGEDGPTHAGSFDISYLRCIPGMLVMTPSDENELRRML-TTGYLFDGPA 478

Query: 555 CFRYPRGAIVRTDLPGYRGIP-IEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
             RYPRG+    + P   G+  +EIGK  V  +GK  ALL +G  +     A AL     
Sbjct: 479 AVRYPRGS--GPNAPLDAGLELLEIGKAIVRRQGKGAALLVFGVQL-----AEALQVGEA 531

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVK 672
           ++ TV D RF KPLD  L+REL  +H  L+T+EE ++ GG GS VS F+A   ++     
Sbjct: 532 LNATVVDMRFVKPLDEALLRELAGSHELLVTIEENAVMGGAGSAVSEFLAAQNII----- 586

Query: 673 WRPIV---LPDNYIEHASPTQQLALAGL 697
            +P++   LPD Y+EHA P Q LA  GL
Sbjct: 587 -KPLLHLGLPDYYVEHAKPAQMLAECGL 613


>gi|302185470|ref|ZP_07262143.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           syringae 642]
          Length = 630

 Score =  464 bits (1194), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 274/649 (42%), Positives = 383/649 (59%), Gaps = 49/649 (7%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD  + P  L+ L   EL+ LA E+R EL   V +T     + L  +ELT+ALH+VF
Sbjct: 15  TPLLDRADTPHGLRRLGEAELETLADELRLELLYSVGQTGGHFGAGLGVIELTIALHYVF 74

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR+ + TLR+KDG++ +  RSESEYD F  GH   S+
Sbjct: 75  DTPDDRLVWDVGHQAYPHKILTGRRARMSTLRQKDGVAAFPRRSESEYDTFGVGHSSTSI 134

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LGMA+A  ++G     + VI +G   AG A+EA+++A  + ++M+VILND+  S+  
Sbjct: 135 SAALGMAIASRLQGSERKSIAVIGDGALTAGMAFEALNHAPEVAADMLVILNDNDMSI-- 192

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                   ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+GM+ 
Sbjct: 193 ------SRNVGGLSNYLAKILSSRTYSSMREGSKKVLSRL-PGAWEIARRTEEYAKGMLV 245

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---RAE-D 374
           P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +HVVT++ +    AE D
Sbjct: 246 P--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDL--KGPQFLHVVTKKGKGFAPAEVD 301

Query: 375 TQKSEAIEKQQ----EGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
                AI K +      A    S P       Y   F + +   AE D  +V +   M+ 
Sbjct: 302 PIGYHAITKLEPLNAPAAQKKISAP------KYSGVFGQWICDMAEADSRLVGITPAMKE 355

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L  F E+FPERYFDV +AEQHAVT +AG+AC G KP   I S FLQR YDQ+++DV 
Sbjct: 356 GSDLVAFSERFPERYFDVAIAEQHAVTLAAGMACEGSKPVVAIYSTFLQRGYDQLIHDVA 415

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q L V F I  AGLVG DGPT  G+FD++++ C+P M+VM PSDE+EL  +++T   + 
Sbjct: 416 VQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMVVMTPSDENELRKLLST-GYLH 474

Query: 551 DRPVCFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
             P   RYPRG    A++ T L       +EIG+G V  +G+ VA+L +G  +     A 
Sbjct: 475 TGPAAVRYPRGTGPNAVIETSLD-----TVEIGRGVVRRQGQGVAILAFGVQL-----AE 524

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG 665
           AL+    +D TV D RF KPLD  LV E   NH  L+T+EE ++ GG G+ VS F+A   
Sbjct: 525 ALVVAEKLDATVIDMRFVKPLDEALVSEAAANHELLVTLEENAVMGGAGAAVSEFLARAN 584

Query: 666 LLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAAT---ALSLLG 711
           +L S +    + LPD Y+EHA P Q L   GL    I A     L+L+G
Sbjct: 585 ILKSVLH---LGLPDVYVEHAKPAQMLTECGLDAQGIEAAINERLALIG 630


>gi|161378143|ref|NP_742690.2| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas putida KT2440]
 gi|38372168|sp|Q88QG7.2|DXS_PSEPK RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
          Length = 631

 Score =  464 bits (1193), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 271/646 (41%), Positives = 385/646 (59%), Gaps = 44/646 (6%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD  + P  L+ L   +L+ LA E+R EL   V +T     + L  +ELT+ALH+VF
Sbjct: 15  TPLLDRADTPAGLRRLAEADLETLADELRQELLYTVGQTGGHFGAGLGVIELTIALHYVF 74

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR+ + +LR+KDGI+ +  RSESEYD F  GH   S+
Sbjct: 75  DTPDDRLVWDVGHQAYPHKILTGRRNRMLSLRQKDGIAAFPRRSESEYDTFGVGHSSTSI 134

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LGMA+A  ++      + VI +G   AG A+EA+++A  ++++M+VILND+  S+  
Sbjct: 135 SAALGMAIAARLQNSARKSIAVIGDGALTAGMAFEALNHAQEVNADMLVILNDNDMSI-- 192

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                   ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+GM+ 
Sbjct: 193 ------SRNVGGLSNYLAKILSSRTYASMREGSKKVLSRL-PGAWEIARRTEEYAKGMLV 245

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---RAE-D 374
           P   TLFEELG  YIGP+DGH++  +I+ L+ +  L   GP  +HVVT++ +    AE D
Sbjct: 246 P--GTLFEELGWNYIGPIDGHDLPTMIATLRNMRDL--KGPQFLHVVTKKGKGFAPAEID 301

Query: 375 TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
                AI K +   +D  + P       Y   F + L   A  D  +V +   M+    L
Sbjct: 302 PIGYHAITKLE--PADKPAAPKKASGPKYSAVFGQWLCDMAAADNRLVGITPAMKEGSDL 359

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F E++PERYFDV +AEQHAVT +AG+AC G KP   I S FLQRAYDQ+++DV  Q L
Sbjct: 360 VDFSERYPERYFDVAIAEQHAVTLAAGMACEGSKPVVAIYSTFLQRAYDQLIHDVAVQNL 419

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
            V F I  AGLVG DGPT  G++D++++ C+P M+VM PSDE+EL  M++T   + + P 
Sbjct: 420 DVLFAIDRAGLVGEDGPTHAGSYDLSYLRCIPGMLVMTPSDENELRKMLST-GHLYNGPA 478

Query: 555 CFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLS 610
             RYPRG    A +  DL      P+EIGKG V  +G+ VALL +G  +     A A+  
Sbjct: 479 AVRYPRGTGPNAPISGDLQ-----PLEIGKGVVRRQGEKVALLVFGVQL-----AEAMQV 528

Query: 611 KLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDS 669
              I+ TV D RF KPLD  LV EL  +H  L+T+EE +I GG G+ V  F+A   +L  
Sbjct: 529 AEQINATVVDMRFVKPLDEALVLELAGSHELLVTIEENAIMGGAGAAVGEFLASQAVL-- 586

Query: 670 GVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
               +P++   LPD Y+EHA P Q LA  GL    I A+  + + R
Sbjct: 587 ----KPLLHLGLPDIYVEHAKPAQMLAECGLDAAGIEASVKARMAR 628


>gi|388547623|ref|ZP_10150885.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. M47T1]
 gi|388274223|gb|EIK93823.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. M47T1]
          Length = 632

 Score =  464 bits (1193), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 266/631 (42%), Positives = 377/631 (59%), Gaps = 44/631 (6%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD  + P  L+ L   EL+ LA E+R EL   V +T     + L  +ELT+ALH+VF
Sbjct: 15  TPLLDRADTPAGLRRLGEAELETLADELRQELLYTVGQTGGHFGAGLGVIELTIALHYVF 74

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR  + +LR+KDG++ +  R+ESEYD F  GH   S+
Sbjct: 75  DTPDDRLVWDVGHQAYPHKILTGRRERMASLRQKDGLAAFPRRAESEYDTFGVGHSSTSI 134

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LGMA+A  ++      + VI +G   AG A+EA+++A  ++++M+VILND+  S+  
Sbjct: 135 SAALGMAIAARLQNSGRKSIAVIGDGALTAGMAFEALNHAPEVNADMLVILNDNDMSI-- 192

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                   ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+GM+ 
Sbjct: 193 ------SRNVGGLSNYLAKILSSRTYASMREGSKKVLSRL-PGAWEIARRTEEYAKGMLV 245

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---RAE-D 374
           P   TLFEELG  YIGP+DGH++  L++ L+ +  L   GP  +HVVT++ +    AE D
Sbjct: 246 P--GTLFEELGWNYIGPIDGHDLPTLVATLRNMRDL--KGPQFLHVVTKKGKGFAPAEVD 301

Query: 375 TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
                AI K +    ++ + P       Y   F + L   A  D+ +V +   M+    L
Sbjct: 302 PIGYHAITKLE--PLNAPAAPKKASGPKYSAVFGQWLCDMAAADQRLVGITPAMKEGSDL 359

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F E++P+RYFDV +AEQHAVT +AG+AC G KP   I S FLQRAYDQ+++DV  Q L
Sbjct: 360 VDFSERYPDRYFDVAIAEQHAVTLAAGMACEGAKPVVAIYSTFLQRAYDQLIHDVAVQNL 419

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
            V F I  AGLVG DGPT  G+FD++++ C+P M+VM PSDE+EL  M++T   + + P 
Sbjct: 420 DVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMVVMTPSDENELRKMLST-GHLHEGPA 478

Query: 555 CFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLS 610
             RYPRG    A + + L       +EIGKG +  EG   ALL +G  +   LK    L 
Sbjct: 479 AVRYPRGTGPNAAIDSSLEA-----LEIGKGVIRREGSKAALLVFGVQLAEALKVAEKL- 532

Query: 611 KLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDS 669
               D TV D RF KPLD  LVR++   H  L+T+EE SI GG G+ VS F+A + LL  
Sbjct: 533 ----DATVVDMRFVKPLDETLVRDIAARHELLVTIEENSIMGGAGAAVSEFLARENLL-- 586

Query: 670 GVKWRPIV---LPDNYIEHASPTQQLALAGL 697
               +P++   LPD Y+EHA P Q LA  GL
Sbjct: 587 ----KPVLHLGLPDTYVEHAKPAQMLAECGL 613


>gi|209517793|ref|ZP_03266628.1| deoxyxylulose-5-phosphate synthase [Burkholderia sp. H160]
 gi|209501739|gb|EEA01760.1| deoxyxylulose-5-phosphate synthase [Burkholderia sp. H160]
          Length = 635

 Score =  463 bits (1192), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 279/639 (43%), Positives = 379/639 (59%), Gaps = 46/639 (7%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L  +++P  L+ L  ++L+ LA E+R+ +   VS+T   L S+L  VELT+ALH+VF  
Sbjct: 4   LLKTIDDPAALRRLDRRQLQPLADELRAFVLDSVSQTGGHLSSNLGTVELTIALHYVFDT 63

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+I+WDVG QTY HKILTGRR  +HTLR+  GISG+  R ESEYD F   H   S+SA
Sbjct: 64  PHDRIVWDVGHQTYPHKILTGRRDQMHTLRQLGGISGFPKRDESEYDTFGTAHSSTSISA 123

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDS-NMIVILNDSRHSLHPK 259
            LGMAVA  ++G     + VI +G   AG A+EAM+NAG  D   ++VILND+  S+ P 
Sbjct: 124 ALGMAVASKLQGDNRMGIAVIGDGAMTAGMAFEAMNNAGVEDDVPLLVILNDNDMSISP- 182

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                   + AL+  L+R+ S + +   R   + +  R+   + + A K++E+A+GMI P
Sbjct: 183 -------PVGALNRHLARLMSGRFYAAARAGVERVL-RVAPPVLDLARKLEEHAKGMIVP 234

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             +TLFEE G  YIGP+DGH+++ LI  LQ +  L   GP  +HVVT   ++ +  + +E
Sbjct: 235 --ATLFEEFGFNYIGPIDGHDLDSLIPTLQNIKEL--RGPQFLHVVT---KKGQGYKLAE 287

Query: 380 AIEKQQEGASDSNSL----PFGNYS-RTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
           A      G    N      P    S +TY   F E L   AE D  +V +   M     +
Sbjct: 288 ADPVLYHGPGKFNPAEGIKPAATPSKKTYTQVFGEWLCDAAELDSRVVGITPAMREGSGM 347

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F+++FP+RYFDVG+AEQHAVTF+ GLA  G+KP   I S FLQRAYDQ+++DV  Q L
Sbjct: 348 VEFEKRFPDRYFDVGIAEQHAVTFAGGLAADGMKPVVAIYSTFLQRAYDQLIHDVALQNL 407

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PV F I  AGLVG+DG T  GA+D+ FM C+PNM VM PSDE+E   M+ T A     P 
Sbjct: 408 PVVFAIDRAGLVGADGATHAGAYDLAFMRCIPNMTVMTPSDENECRQMLYT-ALQQSHPT 466

Query: 555 CFRYPRGAIVRTDLPGYRGI-PIEIGKGKVLVE-----GKDVALLGYGAMVQNCLKARAL 608
             RYPRGA   T +   + +  + +GKG+V  E     GK +A+L +G MV   L A   
Sbjct: 467 AVRYPRGA--GTGVATVKQMTAVPLGKGEVRRETSAPAGKRIAILAFGTMVAPSLAAAEQ 524

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLL 667
           L     D TVA+ RF KPLD +LVR+L + H  ++TVEEGSI GG GS       ++ LL
Sbjct: 525 L-----DATVANMRFVKPLDTELVRKLAETHDAIVTVEEGSIMGGAGS-----ACVEALL 574

Query: 668 DSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIA 703
            SGV  RP++   LPD +I+H  P + LA  GL    IA
Sbjct: 575 ASGV-MRPVLQLGLPDRFIDHGDPAKLLAACGLDAAGIA 612


>gi|15599239|ref|NP_252733.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           PAO1]
 gi|107103558|ref|ZP_01367476.1| hypothetical protein PaerPA_01004628 [Pseudomonas aeruginosa PACS2]
 gi|116052081|ref|YP_789075.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|218889675|ref|YP_002438539.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           LESB58]
 gi|254236933|ref|ZP_04930256.1| 1-deoxyxylulose-5-phosphate synthase [Pseudomonas aeruginosa C3719]
 gi|254242727|ref|ZP_04936049.1| 1-deoxyxylulose-5-phosphate synthase [Pseudomonas aeruginosa 2192]
 gi|296387399|ref|ZP_06876898.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           PAb1]
 gi|355639276|ref|ZP_09051078.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. 2_1_26]
 gi|386056963|ref|YP_005973485.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           M18]
 gi|386068146|ref|YP_005983450.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           NCGM2.S1]
 gi|392982229|ref|YP_006480816.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           DK2]
 gi|416859068|ref|ZP_11913666.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           138244]
 gi|416877743|ref|ZP_11919958.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           152504]
 gi|418588460|ref|ZP_13152471.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           MPAO1/P1]
 gi|418592657|ref|ZP_13156523.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           MPAO1/P2]
 gi|419756861|ref|ZP_14283206.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           PADK2_CF510]
 gi|420137640|ref|ZP_14645605.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           CIG1]
 gi|421158076|ref|ZP_15617374.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           ATCC 25324]
 gi|421168155|ref|ZP_15626264.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           ATCC 700888]
 gi|421172687|ref|ZP_15630452.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           CI27]
 gi|421178783|ref|ZP_15636386.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa E2]
 gi|421518593|ref|ZP_15965267.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           PAO579]
 gi|451982673|ref|ZP_21930977.1| 1-deoxy-D-xylulose 5-phosphate synthase [Pseudomonas aeruginosa
           18A]
 gi|13124137|sp|Q9KGU7.1|DXS_PSEAE RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|122261229|sp|Q02SL1.1|DXS_PSEAB RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|226740158|sp|B7V7R4.1|DXS_PSEA8 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|9664861|gb|AAF97240.1|AF282878_1 1-deoxy-D-xylulose 5-phosphate synthase [Pseudomonas aeruginosa]
 gi|9950240|gb|AAG07431.1|AE004821_4 1-deoxyxylulose-5-phosphate synthase [Pseudomonas aeruginosa PAO1]
 gi|115587302|gb|ABJ13317.1| 1-deoxyxylulose-5-phosphate synthase [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|126168864|gb|EAZ54375.1| 1-deoxyxylulose-5-phosphate synthase [Pseudomonas aeruginosa C3719]
 gi|126196105|gb|EAZ60168.1| 1-deoxyxylulose-5-phosphate synthase [Pseudomonas aeruginosa 2192]
 gi|218769898|emb|CAW25659.1| 1-deoxyxylulose-5-phosphate synthase [Pseudomonas aeruginosa
           LESB58]
 gi|334838830|gb|EGM17535.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           138244]
 gi|334839218|gb|EGM17910.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           152504]
 gi|347303269|gb|AEO73383.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           M18]
 gi|348036705|dbj|BAK92065.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           NCGM2.S1]
 gi|354832131|gb|EHF16132.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. 2_1_26]
 gi|375040747|gb|EHS33485.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           MPAO1/P1]
 gi|375048529|gb|EHS41050.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           MPAO1/P2]
 gi|384396616|gb|EIE43034.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           PADK2_CF510]
 gi|392317734|gb|AFM63114.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           DK2]
 gi|403249616|gb|EJY63107.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           CIG1]
 gi|404348075|gb|EJZ74424.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           PAO579]
 gi|404531450|gb|EKA41404.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           ATCC 700888]
 gi|404537377|gb|EKA46980.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           CI27]
 gi|404547881|gb|EKA56861.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa E2]
 gi|404550012|gb|EKA58820.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           ATCC 25324]
 gi|451759675|emb|CCQ83500.1| 1-deoxy-D-xylulose 5-phosphate synthase [Pseudomonas aeruginosa
           18A]
 gi|453043258|gb|EME90990.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           PA21_ST175]
          Length = 627

 Score =  463 bits (1192), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 271/632 (42%), Positives = 378/632 (59%), Gaps = 40/632 (6%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           ++  TP+LD   +P  L+ L   +L+ LA E+R  L   V +T     + L  VELT+AL
Sbjct: 11  ERPATPLLDRASSPAELRRLGEADLETLADELRQYLLYTVGQTGGHFGAGLGVVELTIAL 70

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H+VF  P D+++WDVG Q Y HKILT RR L+ TLR+K+G++ +  R+ESEYD F  GH 
Sbjct: 71  HYVFDTPDDRLVWDVGHQAYPHKILTERRELMGTLRQKNGLAAFPRRAESEYDTFGVGHS 130

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA LGMA+A  ++GK    V VI +G   AG A+EA+++A  +D++M+VILND+  
Sbjct: 131 STSISAALGMAIAARLQGKERKSVAVIGDGALTAGMAFEALNHASEVDADMLVILNDNDM 190

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+          ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+
Sbjct: 191 SI--------SHNVGGLSNYLAKILSSRTYSSMREGSKKVLSRL-PGAWEIARRTEEYAK 241

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---R 371
           GM+ P   TLFEELG  YIGP+DGH++  L++ L+ +  +   GP  +HVVT++ +    
Sbjct: 242 GMLVP--GTLFEELGWNYIGPIDGHDLPTLVATLRNMRDM--KGPQFLHVVTKKGKGFAP 297

Query: 372 AE-DTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
           AE D     AI K +       S P       Y   F + L   A +D  ++ +   M+ 
Sbjct: 298 AELDPIGYHAITKLEA----PGSAPKKTGGPKYSSVFGQWLCDMAAQDARLLGITPAMKE 353

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L  F E++PERYFDV +AEQHAVT +AG+AC G+KP   I S FLQRAYDQ+++DV 
Sbjct: 354 GSDLVAFSERYPERYFDVAIAEQHAVTLAAGMACEGMKPVVAIYSTFLQRAYDQLIHDVA 413

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q L V F I  AGLVG DGPT  G+FDI+++ C+P M+VM PSDEDEL  ++ T   + 
Sbjct: 414 VQHLDVLFAIDRAGLVGEDGPTHAGSFDISYLRCIPGMLVMTPSDEDELRKLL-TTGYLF 472

Query: 551 DRPVCFRYPRGA----IVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
           D P   RYPRG+     +  DL      P+EIGKG V   G  VALL +G  +   +K  
Sbjct: 473 DGPAAVRYPRGSGPNHPIDPDLQ-----PVEIGKGVVRRRGGRVALLVFGVQLAEAMKVA 527

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG 665
             L     D TV D RF KPLD  LVREL  +H  L+T+EE ++ GG GS V  F+A +G
Sbjct: 528 ESL-----DATVVDMRFVKPLDEALVRELAGSHELLVTIEENAVMGGAGSAVGEFLASEG 582

Query: 666 LLDSGVKWRPIVLPDNYIEHASPTQQLALAGL 697
           L    V    + LPD Y+EHA P++ LA  GL
Sbjct: 583 L---EVPLLQLGLPDYYVEHAKPSEMLAECGL 611


>gi|386022368|ref|YP_005940393.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas stutzeri DSM
           4166]
 gi|327482341|gb|AEA85651.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas stutzeri DSM
           4166]
          Length = 632

 Score =  463 bits (1192), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 276/648 (42%), Positives = 385/648 (59%), Gaps = 43/648 (6%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD    P +L+ L   EL++LA E+R EL   V +T     + L  +ELT+ALH+V+
Sbjct: 15  TPVLDRAATPEQLRRLGEAELEELANELRQELLYSVGRTGGHFGAGLGVIELTIALHYVY 74

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR  + TLR+KDG++ +  R ESEYD F  GH   S+
Sbjct: 75  DTPDDRLVWDVGHQAYPHKILTGRRERMGTLRQKDGLAAFPRRVESEYDTFGVGHSSTSI 134

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LGMAVA  +KG++   + VI +G   AG A+EA+++A  + +NM+V+LND+  S+  
Sbjct: 135 SAALGMAVAARLKGEQRKSIAVIGDGALTAGMAFEALNHAPEVGANMLVVLNDNDMSI-- 192

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                   ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+GM+ 
Sbjct: 193 ------SRNVGGLSNYLAKILSSRTYSSMREGSKKILSRL-PGAWEIARRTEEYAKGMLV 245

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR----RAED 374
           P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +HVVT++ +       D
Sbjct: 246 P--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLD--GPQFLHVVTKKGKGFAPAEAD 301

Query: 375 TQKSEAIEKQQE-GASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
                AI K +  GA      P G     Y + F + L   A  D  +  +   M+    
Sbjct: 302 PITWHAISKLEPVGAPPVPKKPAGP---KYSNVFGQWLCDMAAADPRLTGITPAMKEGSD 358

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L  F E++P+RYFDV +AEQHAVT +AG+AC G+KP   I S FLQRAYDQ+++DV  Q 
Sbjct: 359 LVAFSERYPDRYFDVAIAEQHAVTLAAGMACEGMKPVVAIYSTFLQRAYDQLIHDVAVQN 418

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           L V F I  AGLVG DGPT  G+FD++++ C+P M+VM PSDE+E+  M+ T    +  P
Sbjct: 419 LDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDENEMRRMLTTGYHFEG-P 477

Query: 554 VCFRYPRGAIVRTDL-PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
              RYPRG+     + P     P+EIGK  V  +G  VALL +G  +   L+    L   
Sbjct: 478 AAVRYPRGSGPNASIEPALE--PLEIGKAVVRRQGSKVALLVFGVQLPEALQVGEAL--- 532

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGV 671
             D TV D RF KPLD  L+REL  +H  L+TVEE SI GG GS V+ F+A +G+L    
Sbjct: 533 --DATVVDMRFVKPLDEALLRELAGSHELLVTVEENSIMGGAGSAVAEFLAAEGVL---- 586

Query: 672 KWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAATA---LSLLGRT 713
             RPI+   LPD Y+EHA P++ LA  GL    I A     L+ LG+ 
Sbjct: 587 --RPILHLGLPDYYVEHAKPSEMLAECGLDAAGIEAAVRKRLAALGKA 632


>gi|424939077|ref|ZP_18354840.1| 1-deoxyxylulose-5-phosphate synthase [Pseudomonas aeruginosa
           NCMG1179]
 gi|346055523|dbj|GAA15406.1| 1-deoxyxylulose-5-phosphate synthase [Pseudomonas aeruginosa
           NCMG1179]
          Length = 627

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 271/632 (42%), Positives = 378/632 (59%), Gaps = 40/632 (6%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           ++  TP+LD   +P  L+ L   +L+ LA E+R  L   V +T     + L  VELT+AL
Sbjct: 11  ERPATPLLDRASSPAELRRLGEADLETLADELRQYLLYTVGQTGGHFGAGLGVVELTIAL 70

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H+VF  P D+++WDVG Q Y HKILT RR L+ TLR+K+G++ +  R+ESEYD F  GH 
Sbjct: 71  HYVFDTPDDRLVWDVGHQAYPHKILTERRELMGTLRQKNGLAAFPRRAESEYDTFGVGHS 130

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA LGMA+A  ++GK    V VI +G   AG A+EA+++A  +D++M+VILND+  
Sbjct: 131 STSISAALGMAIAARLQGKERKSVAVIGDGALTAGMAFEALNHASEVDADMLVILNDNDM 190

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+          ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+
Sbjct: 191 SI--------SHNVGGLSNYLAKILSSRTYSSMREGSKKVLSRL-PGAWEIARRTEEYAK 241

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---R 371
           GM+ P   TLFEELG  YIGP+DGH++  L++ L+ +  +   GP  +HVVT++ +    
Sbjct: 242 GMLVP--GTLFEELGWNYIGPIDGHDLPTLVATLRNMRDM--KGPQFLHVVTKKGKGFAP 297

Query: 372 AE-DTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
           AE D     AI K +       S P       Y   F + L   A +D  ++ +   M+ 
Sbjct: 298 AELDPIGYHAITKLEA----PGSAPKKTGGPKYSSVFGQWLCDMAAQDARLLGITPAMKE 353

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L  F E++PERYFDV +AEQHAVT +AG+AC G+KP   I S FLQRAYDQ+++DV 
Sbjct: 354 GSDLVAFSERYPERYFDVAIAEQHAVTLAAGMACEGMKPVVAIYSTFLQRAYDQLIHDVA 413

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q L V F I  AGLVG DGPT  G+FDI+++ C+P M+VM PSDEDEL  ++ T   + 
Sbjct: 414 VQHLDVLFAIDRAGLVGEDGPTHAGSFDISYLRCIPGMLVMTPSDEDELRKLL-TTGYLF 472

Query: 551 DRPVCFRYPRGA----IVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
           D P   RYPRG+     +  DL      P+EIGKG V   G  VALL +G  +   +K  
Sbjct: 473 DGPAAVRYPRGSGPNHPIDPDLQ-----PVEIGKGVVRRRGGRVALLVFGVQLAEAMKVA 527

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG 665
             L     D TV D RF KPLD  LVREL  +H  L+T+EE ++ GG GS V  F+A +G
Sbjct: 528 ESL-----DATVVDMRFVKPLDETLVRELAGSHELLVTIEENAVMGGAGSAVGEFLASEG 582

Query: 666 LLDSGVKWRPIVLPDNYIEHASPTQQLALAGL 697
           L    V    + LPD Y+EHA P++ LA  GL
Sbjct: 583 L---EVPLLQLGLPDYYVEHAKPSEMLAECGL 611


>gi|24981908|gb|AAN66154.1|AE016243_6 deoxyxylulose-5-phosphate synthase [Pseudomonas putida KT2440]
          Length = 655

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 271/646 (41%), Positives = 385/646 (59%), Gaps = 44/646 (6%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD  + P  L+ L   +L+ LA E+R EL   V +T     + L  +ELT+ALH+VF
Sbjct: 39  TPLLDRADTPAGLRRLAEADLETLADELRQELLYTVGQTGGHFGAGLGVIELTIALHYVF 98

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR+ + +LR+KDGI+ +  RSESEYD F  GH   S+
Sbjct: 99  DTPDDRLVWDVGHQAYPHKILTGRRNRMLSLRQKDGIAAFPRRSESEYDTFGVGHSSTSI 158

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LGMA+A  ++      + VI +G   AG A+EA+++A  ++++M+VILND+  S+  
Sbjct: 159 SAALGMAIAARLQNSARKSIAVIGDGALTAGMAFEALNHAQEVNADMLVILNDNDMSI-- 216

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                   ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+GM+ 
Sbjct: 217 ------SRNVGGLSNYLAKILSSRTYASMREGSKKVLSRL-PGAWEIARRTEEYAKGMLV 269

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---RAE-D 374
           P   TLFEELG  YIGP+DGH++  +I+ L+ +  L   GP  +HVVT++ +    AE D
Sbjct: 270 P--GTLFEELGWNYIGPIDGHDLPTMIATLRNMRDL--KGPQFLHVVTKKGKGFAPAEID 325

Query: 375 TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
                AI K +   +D  + P       Y   F + L   A  D  +V +   M+    L
Sbjct: 326 PIGYHAITKLE--PADKPAAPKKASGPKYSAVFGQWLCDMAAADNRLVGITPAMKEGSDL 383

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F E++PERYFDV +AEQHAVT +AG+AC G KP   I S FLQRAYDQ+++DV  Q L
Sbjct: 384 VDFSERYPERYFDVAIAEQHAVTLAAGMACEGSKPVVAIYSTFLQRAYDQLIHDVAVQNL 443

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
            V F I  AGLVG DGPT  G++D++++ C+P M+VM PSDE+EL  M++T   + + P 
Sbjct: 444 DVLFAIDRAGLVGEDGPTHAGSYDLSYLRCIPGMLVMTPSDENELRKMLST-GHLYNGPA 502

Query: 555 CFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLS 610
             RYPRG    A +  DL      P+EIGKG V  +G+ VALL +G  +     A A+  
Sbjct: 503 AVRYPRGTGPNAPISGDLQ-----PLEIGKGVVRRQGEKVALLVFGVQL-----AEAMQV 552

Query: 611 KLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDS 669
              I+ TV D RF KPLD  LV EL  +H  L+T+EE +I GG G+ V  F+A   +L  
Sbjct: 553 AEQINATVVDMRFVKPLDEALVLELAGSHELLVTIEENAIMGGAGAAVGEFLASQAVL-- 610

Query: 670 GVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
               +P++   LPD Y+EHA P Q LA  GL    I A+  + + R
Sbjct: 611 ----KPLLHLGLPDIYVEHAKPAQMLAECGLDAAGIEASVKARMAR 652


>gi|313109487|ref|ZP_07795443.1| 1-deoxyxylulose-5-phosphate synthase [Pseudomonas aeruginosa 39016]
 gi|310881945|gb|EFQ40539.1| 1-deoxyxylulose-5-phosphate synthase [Pseudomonas aeruginosa 39016]
          Length = 633

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 271/632 (42%), Positives = 378/632 (59%), Gaps = 40/632 (6%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           ++  TP+LD   +P  L+ L   +L+ LA E+R  L   V +T     + L  VELT+AL
Sbjct: 17  ERPATPLLDRASSPAELRRLGEADLETLADELRQYLLYTVGQTGGHFGAGLGVVELTIAL 76

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H+VF  P D+++WDVG Q Y HKILT RR L+ TLR+K+G++ +  R+ESEYD F  GH 
Sbjct: 77  HYVFDTPDDRLVWDVGHQAYPHKILTERRELMGTLRQKNGLAAFPRRAESEYDTFGVGHS 136

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA LGMA+A  ++GK    V VI +G   AG A+EA+++A  +D++M+VILND+  
Sbjct: 137 STSISAALGMAIAARLQGKERKSVAVIGDGALTAGMAFEALNHASEVDADMLVILNDNDM 196

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+          ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+
Sbjct: 197 SI--------SHNVGGLSNYLAKILSSRTYSSMREGSKKVLSRL-PGAWEIARRTEEYAK 247

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---R 371
           GM+ P   TLFEELG  YIGP+DGH++  L++ L+ +  +   GP  +HVVT++ +    
Sbjct: 248 GMLVP--GTLFEELGWNYIGPIDGHDLPTLVATLRNMRDM--KGPQFLHVVTKKGKGFAP 303

Query: 372 AE-DTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
           AE D     AI K +       S P       Y   F + L   A +D  ++ +   M+ 
Sbjct: 304 AELDPIGYHAITKLEA----PGSAPKKTGGPKYSSVFGQWLCDMAAQDARLLGITPAMKE 359

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L  F E++PERYFDV +AEQHAVT +AG+AC G+KP   I S FLQRAYDQ+++DV 
Sbjct: 360 GSDLVAFSERYPERYFDVAIAEQHAVTLAAGMACEGMKPVVAIYSTFLQRAYDQLIHDVA 419

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q L V F I  AGLVG DGPT  G+FDI+++ C+P M+VM PSDEDEL  ++ T   + 
Sbjct: 420 VQHLDVLFAIDRAGLVGEDGPTHAGSFDISYLRCIPGMLVMTPSDEDELRKLL-TTGYLF 478

Query: 551 DRPVCFRYPRGA----IVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
           D P   RYPRG+     +  DL      P+EIGKG V   G  VALL +G  +   +K  
Sbjct: 479 DGPAAVRYPRGSGPNHPIDPDLQ-----PVEIGKGVVRRRGGRVALLVFGVQLAEAMKVA 533

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG 665
             L     D TV D RF KPLD  LVREL  +H  L+T+EE ++ GG GS V  F+A +G
Sbjct: 534 ESL-----DATVVDMRFVKPLDEALVRELAGSHELLVTIEENAVMGGAGSAVGEFLASEG 588

Query: 666 LLDSGVKWRPIVLPDNYIEHASPTQQLALAGL 697
           L    V    + LPD Y+EHA P++ LA  GL
Sbjct: 589 L---EVPLLQLGLPDYYVEHAKPSEMLAECGL 617


>gi|66043871|ref|YP_233712.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           syringae B728a]
 gi|75503602|sp|Q4ZYU8.1|DXS_PSEU2 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|63254578|gb|AAY35674.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           syringae B728a]
          Length = 630

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 273/649 (42%), Positives = 383/649 (59%), Gaps = 49/649 (7%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD  + P  L+ L   EL+ LA E+R EL   V +T     + L  +ELT+ALH+VF
Sbjct: 15  TPLLDRADTPHGLRRLGEAELETLADELRLELLYSVGQTGGHFGAGLGVIELTIALHYVF 74

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR+ + TLR+K+G++ +  RSESEYD F  GH   S+
Sbjct: 75  DTPDDRLVWDVGHQAYPHKILTGRRARMSTLRQKEGVAAFPRRSESEYDTFGVGHSSTSI 134

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LGMA+A  ++G     + VI +G   AG A+EA+++A  + ++M+VILND+  S+  
Sbjct: 135 SAALGMAIASRLQGSERKSIAVIGDGALTAGMAFEALNHAPEVAADMLVILNDNDMSI-- 192

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                   ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+GM+ 
Sbjct: 193 ------SRNVGGLSNYLAKILSSRTYSSMREGSKKVLSRL-PGAWEIARRTEEYAKGMLV 245

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---RAE-D 374
           P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +HVVT++ +    AE D
Sbjct: 246 P--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDL--KGPQFLHVVTKKGKGFAPAEVD 301

Query: 375 TQKSEAIEKQQ----EGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
                AI K +      A    S P       Y   F + +   A+ D  +V +   M+ 
Sbjct: 302 PIGYHAITKLEPLNAPAAQKKISAP------KYSGVFGQWICDMADADARLVGITPAMKE 355

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L  F E+FPERYFDV +AEQHAVT +AG+AC G KP   I S FLQR YDQ+++DV 
Sbjct: 356 GSDLVAFSERFPERYFDVAIAEQHAVTLAAGMACEGSKPVVAIYSTFLQRGYDQLIHDVA 415

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q L V F I  AGLVG DGPT  G+FD++++ C+P M+VM PSDE+EL  +++T   + 
Sbjct: 416 VQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDENELRKLLST-GYLH 474

Query: 551 DRPVCFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
             P   RYPRG    A++   L      P+EIGKG V  +G+ VA+L +G  +     A 
Sbjct: 475 TGPAAVRYPRGTGPNAVIEASLD-----PLEIGKGVVRRQGQGVAILAFGVQL-----AE 524

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG 665
           AL+    +D TV D RF KPLD  LV E   NH  L+T+EE ++ GG G+ VS F+A   
Sbjct: 525 ALVVAEKLDATVIDMRFVKPLDEALVSEAAANHELLVTLEENAVMGGAGAAVSEFLARAN 584

Query: 666 LLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAAT---ALSLLG 711
           +L S +    + LPD Y+EHA P Q L   GL    I A     L+L+G
Sbjct: 585 ILKSVLH---LGLPDVYVEHAKPAQMLTECGLDAQGIEAAINERLALIG 630


>gi|237797520|ref|ZP_04585981.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|331020370|gb|EGI00427.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           oryzae str. 1_6]
          Length = 631

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 272/641 (42%), Positives = 384/641 (59%), Gaps = 32/641 (4%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD  + P  L+ L   EL+ LA E+R EL   V +T     + L  +ELT+ALH+VF
Sbjct: 15  TPLLDQADTPDGLRRLGEAELETLADELRLELLYSVGQTGGHFGAGLGVIELTIALHYVF 74

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR+ + TLR+KDG++ +  RSESEYD F  GH   S+
Sbjct: 75  DTPDDRLVWDVGHQAYPHKILTGRRARMSTLRQKDGVAAFPRRSESEYDTFGVGHSSTSI 134

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LGMA+A  ++G     + VI +G   AG A+EA+++A  + +NM+VILND+  S+  
Sbjct: 135 SAALGMAIASRLQGSERKSIAVIGDGALTAGMAFEALNHAPEVAANMLVILNDNDMSI-- 192

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                   ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+GM+ 
Sbjct: 193 ------SRNVGGLSNYLAKILSSRTYTSMREGSKKVLSRL-PGAWEIARRTEEYAKGMLV 245

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---RAE-D 374
           P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +HVVT++ +    AE D
Sbjct: 246 P--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDL--KGPQFLHVVTKKGKGFAPAEVD 301

Query: 375 TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
                AI K  E  +   S+     +  Y   F + +   AE D  +V +   M+    L
Sbjct: 302 PIGYHAITK-LEPLNAPVSIQKKVSAPKYSGVFGQWICDMAEADSRLVGITPAMKEGSDL 360

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F E+FPERYFDV +AEQHAVT +AG+AC G KP   I S FLQR YDQ+V+DV  Q L
Sbjct: 361 VEFSERFPERYFDVAIAEQHAVTLAAGMACEGSKPVVAIYSTFLQRGYDQLVHDVAVQNL 420

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
            V F I  AGLVG DGPT  G+FD++++ C+P ++VM PSDE+EL  +++T   +   P 
Sbjct: 421 DVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGIVVMTPSDENELRKLLST-GYLHTGPA 479

Query: 555 CFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGI 614
             RYPRG     ++      P+EIGKG V  +G+ VA+L +G  + +     A++    +
Sbjct: 480 AVRYPRGTGPNAEIEASLK-PVEIGKGVVRRQGQGVAILVFGVQLSD-----AMVVAEKL 533

Query: 615 DVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVKW 673
           D TV D RF KPLD  LVRE   +H  L+T+EE ++ GG G+ VS F+A   +L S +  
Sbjct: 534 DATVIDMRFVKPLDEALVRETAASHELLVTLEENAVMGGAGAAVSEFLARVNILKSVLH- 592

Query: 674 RPIVLPDNYIEHASPTQQLALAGLTGHHIAAT---ALSLLG 711
             + LPD Y+EHA P Q LA  GL    I A     L+L+G
Sbjct: 593 --LGLPDVYVEHAKPAQMLAECGLNAEGIEAAINERLALIG 631


>gi|421618907|ref|ZP_16059874.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas stutzeri KOS6]
 gi|409779087|gb|EKN58761.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas stutzeri KOS6]
          Length = 632

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 270/636 (42%), Positives = 379/636 (59%), Gaps = 38/636 (5%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD    P +L+ L+  EL++LA E+R EL   V +T     + L  +ELT+ALH+V+
Sbjct: 15  TPVLDRAATPEQLRRLSEAELEELANELRQELLYSVGRTGGHFGAGLGVIELTIALHYVY 74

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR  + TLR+KDG++ +  RSESEYD F  GH   S+
Sbjct: 75  DTPDDRLVWDVGHQAYPHKILTGRRERMATLRQKDGLAAFPRRSESEYDTFGVGHSSTSI 134

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LGMAVA  +KG++   + VI +G   AG A+EA+++A  + +NM+V+LND+  S+  
Sbjct: 135 SAALGMAVAARLKGEQRKSIAVIGDGALTAGMAFEALNHAPEVGANMLVVLNDNDMSI-- 192

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                   ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+GM+ 
Sbjct: 193 ------SRNVGGLSNYLAKILSSRTYSSMREGSKKILSRL-PGAWEIARRTEEYAKGMLV 245

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR----RAED 374
           P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +HVVT++ +       D
Sbjct: 246 P--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLD--GPQFLHVVTKKGKGFAPAEAD 301

Query: 375 TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
                AI K +   +             Y + F + L   A  D  +  +   M+    L
Sbjct: 302 PITWHAISKLEPVGAPPAPK--KPAGPKYSNVFGQWLCDMAAADARLTGITPAMKEGSDL 359

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F E++P+RYFDV +AEQHAVT +AG+AC GLKP   I S FLQRAYDQ+++DV  Q L
Sbjct: 360 VAFSERYPDRYFDVAIAEQHAVTLAAGMACEGLKPVVAIYSTFLQRAYDQLIHDVAVQNL 419

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
            V F I  AGLVG DGPT  G+FD++++ C+P M+VM PSDE+E+  M+ T    +  P 
Sbjct: 420 DVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDENEMRRMLTTGYHFEG-PA 478

Query: 555 CFRYPRGAIVRTDL-PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
             RYPRG+     + PG    P+EIGK  V  +G   ALL +G  +   L+    L    
Sbjct: 479 AVRYPRGSGPNAAIEPGLE--PLEIGKAVVRRQGSKTALLVFGVQLPEALRVGEAL---- 532

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVK 672
            D TV D RF KPLD  L+REL  +H  L+T+EE SI GG GS V+ F+A +G+L     
Sbjct: 533 -DATVVDMRFVKPLDEALLRELAASHALLVTIEENSIMGGAGSAVAEFLAAEGVL----- 586

Query: 673 WRPIV---LPDNYIEHASPTQQLALAGLTGHHIAAT 705
            RPI+   LPD Y+EHA P++ LA  GL    I A 
Sbjct: 587 -RPILHLGLPDYYVEHAKPSEMLAECGLDAAGIEAA 621


>gi|146284018|ref|YP_001174171.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas stutzeri
           A1501]
 gi|166201531|sp|A4VQS8.1|DXS_PSEU5 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|145572223|gb|ABP81329.1| 1-deoxyxylulose-5-phosphate synthase [Pseudomonas stutzeri A1501]
          Length = 632

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 272/629 (43%), Positives = 378/629 (60%), Gaps = 40/629 (6%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD    P +L+ L   EL++LA E+R EL   V +T     + L  +ELT+ALH+V+
Sbjct: 15  TPVLDRAATPEQLRRLGEAELEELANELRQELLYSVGRTGGHFGAGLGVIELTIALHYVY 74

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR  + TLR+KDG++ +  R ESEYD F  GH   S+
Sbjct: 75  DTPDDRLVWDVGHQAYPHKILTGRRERMGTLRQKDGLAAFPRRVESEYDTFGVGHSSTSI 134

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LGMAVA  +KG++   + VI +G   AG A+EA+++A  + +NM+V+LND+  S+  
Sbjct: 135 SAALGMAVAARLKGEQRKSIAVIGDGALTAGMAFEALNHAPEVGANMLVVLNDNDMSI-- 192

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                   ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+GM+ 
Sbjct: 193 ------SRNVGGLSNYLAKILSSRTYSSMREGSKKILSRL-PGAWEIARRTEEYAKGMLV 245

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR----RAED 374
           P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +HVVT++ +       D
Sbjct: 246 P--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLD--GPQFLHVVTKKGKGFAPAEAD 301

Query: 375 TQKSEAIEKQQE-GASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
                AI K +  GA  +   P G     Y + F + L   A  D  +  +   M+    
Sbjct: 302 PITWHAISKLEPVGAPPAPKKPTGP---KYSNVFGQWLCDMAAADPRLTGITPAMKEGSD 358

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L  F E++P+RYFDV +AEQHAVT +AG+AC GLKP   I S FLQRAYDQ+++DV  Q 
Sbjct: 359 LVAFSERYPDRYFDVAIAEQHAVTLAAGMACEGLKPVVAIYSTFLQRAYDQLIHDVAVQN 418

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           L V F I  AGLVG DGPT  G+FD++++ C+P M+VM PSDE+E+  M+ T    +  P
Sbjct: 419 LDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDENEMRRMLTTGYHFEG-P 477

Query: 554 VCFRYPRGAIVRTDL-PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
              RYPRG+     + P     P+EIGK  V   G  VALL +G  +   L+    L   
Sbjct: 478 AAVRYPRGSGPNASIEPALE--PLEIGKAVVRRRGSKVALLVFGVQLPEALQVGDAL--- 532

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGV 671
             D TV D RF KPLD  L+REL  +H  L+TVEE SI GG GS V+ F+A +G+L    
Sbjct: 533 --DATVVDMRFVKPLDEALLRELAGSHELLVTVEENSIMGGAGSAVAEFLAAEGVL---- 586

Query: 672 KWRPIV---LPDNYIEHASPTQQLALAGL 697
             RPI+   LPD Y+EHA P++ LA  GL
Sbjct: 587 --RPILHLGLPDYYVEHAKPSEMLAECGL 613


>gi|170719765|ref|YP_001747453.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas putida W619]
 gi|229836073|sp|B1J3G4.1|DXS_PSEPW RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|169757768|gb|ACA71084.1| deoxyxylulose-5-phosphate synthase [Pseudomonas putida W619]
          Length = 631

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 269/639 (42%), Positives = 382/639 (59%), Gaps = 44/639 (6%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD  + P  L+ L   +L+ LA E+R EL   V +T     + L  +ELT+ALH+VF
Sbjct: 15  TPLLDRADTPAGLRRLAEADLEHLADELRQELLYTVGQTGGHFGAGLGVIELTIALHYVF 74

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR+ + +LR+KDGI+ +  RSESEYD F  GH   S+
Sbjct: 75  DTPDDRLVWDVGHQAYPHKILTGRRNRMLSLRQKDGIAAFPRRSESEYDTFGVGHSSTSI 134

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LGMA+A  ++      + VI +G   AG A+EA+++A  ++++M+VILND+  S+  
Sbjct: 135 SAALGMAIAARLQNSARKSIAVIGDGALTAGMAFEALNHAQEVNADMLVILNDNDMSI-- 192

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                   ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+GM+ 
Sbjct: 193 ------SRNVGGLSNYLAKILSSRTYASMREGSKKVLSRL-PGAWEIARRTEEYAKGMLV 245

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---RAE-D 374
           P   TLFEELG  YIGP+DGH++  +I+ L+ +  L   GP  +HVVT++ +    AE D
Sbjct: 246 P--GTLFEELGWNYIGPIDGHDLPTMIATLRNMRDL--KGPQFLHVVTKKGKGFAPAEID 301

Query: 375 TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
                AI K +   +D  + P       Y   F + L   A  D  +V +   M+    L
Sbjct: 302 PIGYHAITKLEP--ADKPAAPKKASGPKYSAVFGQWLCDMAAADNRLVGITPAMKEGSDL 359

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F E++PERYFDV +AEQHAVT +AG+AC G KP   I S FLQRAYDQ+++DV  Q L
Sbjct: 360 VAFSERYPERYFDVAIAEQHAVTLAAGMACEGSKPVVAIYSTFLQRAYDQLIHDVAVQNL 419

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
            V F I  AGLVG DGPT  G++D++++ C+P M+VM PSDE+EL  M++T   + + P 
Sbjct: 420 DVLFAIDRAGLVGEDGPTHAGSYDLSYLRCIPGMLVMTPSDENELRKMLST-GHLYNGPA 478

Query: 555 CFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLS 610
             RYPRG    A +  DL      P+EIGKG +  +G+ VALL +G  +     A AL  
Sbjct: 479 AVRYPRGTGPNAPISGDLE-----PLEIGKGVIRRQGEKVALLVFGVQL-----AEALQV 528

Query: 611 KLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDS 669
              I+ TV D RF KPLD  LV EL  +H  L+T+EE +I GG G+ V  F+A   ++  
Sbjct: 529 AEQINATVVDMRFVKPLDEALVLELAGSHALLVTLEENAIMGGAGAAVGEFLASQAVI-- 586

Query: 670 GVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAAT 705
               +P++   LPD Y+EHA P Q LA  GL    I A+
Sbjct: 587 ----KPLLHLGLPDIYVEHAKPAQMLAECGLDAAGIEAS 621


>gi|431800579|ref|YP_007227482.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas putida HB3267]
 gi|430791344|gb|AGA71539.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas putida HB3267]
          Length = 631

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 270/646 (41%), Positives = 385/646 (59%), Gaps = 44/646 (6%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD  + P  L+ L   +L+ LA E+R EL   V +T     + L  +ELT+ALH+VF
Sbjct: 15  TPLLDRADTPAGLRRLAEADLETLADELRQELLYTVGQTGGHFGAGLGVIELTIALHYVF 74

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR+ + +LR+KDGI+ +  RSESEYD F  GH   S+
Sbjct: 75  DTPDDRLVWDVGHQAYPHKILTGRRNRMLSLRQKDGIAAFPRRSESEYDTFGVGHSSTSI 134

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LGMA+A  ++      + VI +G   AG A+EA+++A  ++++M+VILND+  S+  
Sbjct: 135 SAALGMAIAARLQNSDRKSIAVIGDGALTAGMAFEALNHAQEVNADMLVILNDNDMSI-- 192

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                   ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+GM+ 
Sbjct: 193 ------SRNVGGLSNYLAKILSSRTYASMREGSKKVLSRL-PGAWEIARRTEEYAKGMLV 245

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---RAE-D 374
           P   TLFEELG  YIGP+DGH++  +I+ L+ +  L   GP  +HVVT++ +    AE D
Sbjct: 246 P--GTLFEELGWNYIGPIDGHDLPTMIATLRNMRDL--KGPQFLHVVTKKGKGFAPAEID 301

Query: 375 TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
                AI K +   +D  + P       Y   F + L   A  D  +V +   M+    L
Sbjct: 302 PIGYHAITKLE--PADKPAAPKKASGPKYSAVFGQWLCDMAAADNRLVGITPAMKEGSDL 359

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F E++PERYFDV +AEQHAVT +AG+AC G KP   I S FLQRAYDQ+++DV  Q L
Sbjct: 360 VEFSERYPERYFDVAIAEQHAVTLAAGMACEGSKPVVAIYSTFLQRAYDQLIHDVAVQNL 419

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
            V F I  AGLVG DGPT  G++D++++ C+P M+VM PSDE+EL  M++T   + + P 
Sbjct: 420 DVLFAIDRAGLVGEDGPTHAGSYDLSYLRCIPGMLVMTPSDENELRKMLST-GHLYNGPA 478

Query: 555 CFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLS 610
             RYPRG    A +  DL      P+EIGKG V  +G+ VALL +G  +     A A+  
Sbjct: 479 AVRYPRGTGPNAPISGDLE-----PLEIGKGVVRRQGEKVALLVFGVQL-----AEAMQV 528

Query: 611 KLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDS 669
              I+ TV D RF KPLD  LV EL  +H  L+T+EE +I GG G+ V  F+A   ++  
Sbjct: 529 AEQINATVVDMRFVKPLDEALVLELAASHELLVTIEENAIMGGAGAAVGEFLASQAIV-- 586

Query: 670 GVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
               +P++   LPD Y+EHA P Q LA  GL    I A+  + + R
Sbjct: 587 ----KPLLHLGLPDIYVEHAKPAQMLAECGLDAAGIEASVKARMTR 628


>gi|148545811|ref|YP_001265913.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas putida F1]
 gi|395446913|ref|YP_006387166.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas putida ND6]
 gi|421524821|ref|ZP_15971442.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas putida LS46]
 gi|166201530|sp|A5VXW9.1|DXS_PSEP1 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|148509869|gb|ABQ76729.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas putida F1]
 gi|388560910|gb|AFK70051.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas putida ND6]
 gi|402751284|gb|EJX11797.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas putida LS46]
          Length = 631

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 270/639 (42%), Positives = 382/639 (59%), Gaps = 44/639 (6%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD  + P  L+ L   +L+ LA E+R EL   V +T     + L  +ELT+ALH+VF
Sbjct: 15  TPLLDRADTPAGLRRLAEADLETLADELRQELLYTVGQTGGHFGAGLGVIELTIALHYVF 74

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR+ + +LR+KDGI+ +  RSESEYD F  GH   S+
Sbjct: 75  DTPDDRLVWDVGHQAYPHKILTGRRNRMLSLRQKDGIAAFPRRSESEYDTFGVGHSSTSI 134

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LGMA+A  ++      + VI +G   AG A+EA+++A  ++++M+VILND+  S+  
Sbjct: 135 SAALGMAIAARLQNSARKSIAVIGDGALTAGMAFEALNHAQEVNADMLVILNDNDMSI-- 192

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                   ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+GM+ 
Sbjct: 193 ------SRNVGGLSNYLAKILSSRTYASMREGSKKVLSRL-PGAWEIARRTEEYAKGMLV 245

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---RAE-D 374
           P   TLFEELG  YIGP+DGH++  +I+ L+ +  L   GP  +HVVT++ +    AE D
Sbjct: 246 P--GTLFEELGWNYIGPIDGHDLPTMIATLRNMRDL--KGPQFLHVVTKKGKGFAPAEID 301

Query: 375 TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
                AI K +   +D  + P       Y   F + L   A  D  +V +   M+    L
Sbjct: 302 PIGYHAITKLE--PADKPAAPKKASGPKYSAVFGQWLCDMAAADNRLVGITPAMKEGSDL 359

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F E++PERYFDV +AEQHAVT +AG+AC G KP   I S FLQRAYDQ+++DV  Q L
Sbjct: 360 VDFSERYPERYFDVAIAEQHAVTLAAGMACEGSKPVVAIYSTFLQRAYDQLIHDVAVQNL 419

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
            V F I  AGLVG DGPT  G++D++++ C+P M+VM PSDE+EL  M++T   + + P 
Sbjct: 420 DVLFAIDRAGLVGEDGPTHAGSYDLSYLRCIPGMLVMTPSDENELRKMLST-GHLYNGPA 478

Query: 555 CFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLS 610
             RYPRG    A +  DL      P+EIGKG V  +G+ VALL +G  +     A A+  
Sbjct: 479 AVRYPRGTGPNAPISGDLQ-----PLEIGKGVVRRQGEKVALLVFGVQL-----AEAMQV 528

Query: 611 KLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDS 669
              I+ TV D RF KPLD  LV EL  +H  L+T+EE +I GG G+ V  F+A   +L  
Sbjct: 529 AEQINATVVDMRFVKPLDEALVLELAGSHELLVTIEENAIMGGAGAAVGEFLASQAVL-- 586

Query: 670 GVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAAT 705
               +P++   LPD Y+EHA P Q LA  GL    I A+
Sbjct: 587 ----KPLLHLGLPDIYVEHAKPAQMLAECGLDAAGIEAS 621


>gi|325294213|ref|YP_004280727.1| 1-deoxy-D-xylulose-5-phosphate synthase [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325064661|gb|ADY72668.1| 1-deoxy-D-xylulose-5-phosphate synthase [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 619

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 268/647 (41%), Positives = 387/647 (59%), Gaps = 39/647 (6%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L+ V +P  +K L+ +EL+QLA ++R  +  +V+KT   L SSL  VELT+AL  VF  
Sbjct: 2   VLERVNSPDDVKKLSTEELRQLAQDVRKFIIDVVTKTGGHLASSLGVVELTLALLKVFSP 61

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+I+WDVG Q+Y +KILTGR+   +TLR+  GISG+ S  ES YD F  GH   S+SA
Sbjct: 62  PKDEIIWDVGHQSYPYKILTGRKEKFYTLRQYGGISGFPSIKESPYDVFGVGHSSTSISA 121

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKI 260
            LG+ V + +KG+   ++ VI +G   AG+AYE ++NAG L  ++IVILND+  S+    
Sbjct: 122 ALGIRVGKKLKGEEGHVIAVIGDGALTAGEAYEGLNNAGQLGEDLIVILNDNEMSI---- 177

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRI-GRGMHEWAAKVDEY-ARGMIG 318
                 +I A+S+ L+++ + +  R+ +   + +TK+I G  +++   +V++   +G+  
Sbjct: 178 ----SKNIGAISNYLTKVTTGEFLRKAKHRLEEVTKKIFGEKVYKGLKRVEDLIVKGLFP 233

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDT-QK 377
           P    LFEELG  Y+GP+DGH+++ LI  L+ V+ +   GP LVHV+T++ +  E   +K
Sbjct: 234 P--GMLFEELGFRYVGPIDGHDLDTLIVTLENVSKMS--GPTLVHVITKKGKGYEPAEEK 289

Query: 378 SEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLF 437
            E         ++S+S        TY + F + L+   +K KDIV + A M     L  F
Sbjct: 290 PERFHGISPKKTNSDS-----KQPTYTEVFSKTLIEIGKKYKDIVAITAAMPSGTGLDKF 344

Query: 438 QEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVR 497
           +E FPERY+DVG+AEQHAVTF+AG+A  GLKP   I S FLQRA+DQ+V+DV  Q LPV 
Sbjct: 345 KEVFPERYYDVGIAEQHAVTFAAGMAKKGLKPVVAIYSTFLQRAFDQIVHDVALQELPVV 404

Query: 498 FVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFR 557
           F I  AGLVG DG T  GAFD++++  +PNM+V  P DE+EL  ++ T A   ++P   R
Sbjct: 405 FAIDRAGLVGEDGATHHGAFDLSYLRIIPNMVVAVPKDEEELRHLLYT-AVRSNKPFAVR 463

Query: 558 YPR----GAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
           YPR    G ++R  L       I IG  +VL +GKD+A+L  G  V   L A   L KLG
Sbjct: 464 YPRGRGYGVLLREPL-----YEIPIGTWEVLRKGKDMAILANGWTVYQALDAAKELEKLG 518

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIA--LDGLLDSG 670
           I VTV +AR+ KPLD  L+REL + +  ++TVEE ++ GGFGS V  F+A    G L + 
Sbjct: 519 ISVTVVNARYVKPLDEVLLRELAKEYELILTVEENTVKGGFGSTVDEFLAPWYQGKLVN- 577

Query: 671 VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREAL 717
                I LPD +IEH        LAG+    I    +  L +   +L
Sbjct: 578 -----IGLPDEFIEHGDQNLLRRLAGIDKEGIKKKVMEFLKKRASSL 619


>gi|94311551|ref|YP_584761.1| 1-deoxy-D-xylulose-5-phosphate synthase [Cupriavidus metallidurans
           CH34]
 gi|118595608|sp|Q1LK34.1|DXS_RALME RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|93355403|gb|ABF09492.1| 1-deoxyxylulose-5-phosphate synthase, thiamine-requiring,
           FAD-requiring [Cupriavidus metallidurans CH34]
          Length = 637

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 267/636 (41%), Positives = 383/636 (60%), Gaps = 48/636 (7%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L+ +++P  L+ L  ++L  LA E+R+ +   VS+T   L S+L  VELT+ALH+VF  
Sbjct: 5   LLNKIDDPADLRKLDRRQLDTLAEELRAYVLESVSQTGGHLSSNLGTVELTIALHYVFDT 64

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+++WDVG Q+Y HKILTGRR  + TLR+  GISG+  R+ESEYD F   H   S+SA
Sbjct: 65  PNDRVVWDVGHQSYPHKILTGRRDRMSTLRQYGGISGFPRRAESEYDTFGTAHSSTSISA 124

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAG-YLDSNMIVILNDSRHSLHPK 259
            LGMA+    +G++   + VI +G   AG A+EAM+NAG Y D  M+V+LND+  S+ P 
Sbjct: 125 ALGMALGARTRGEKRVGIAVIGDGAMTAGMAFEAMNNAGVYKDLPMLVVLNDNDMSISP- 183

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTK--RIGRGMHEWAAKVDEYARGMI 317
                   +  L+  L+R+ S + +   +   KG+ K   +   + E+A +++E+A+GM+
Sbjct: 184 -------PVGMLNKHLARLMSGQFYAATK---KGIEKVLSVAPPVLEFAKRLEEHAKGMV 233

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEV--ASLGSMGPVLVHVVTEENRRAEDT 375
            P  +TLFEE G  Y+GP+DGH++E L+  LQ +   +L   GP  +HVVT   ++ +  
Sbjct: 234 VP--ATLFEEFGFDYVGPIDGHDLESLVPTLQNIRQRALEGHGPQFLHVVT---KKGQGY 288

Query: 376 QKSEAIEKQQEGASDSNSL----PFGNYSR-TYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
           + +EA      G    N      P    SR TY   F E L   A  DK ++ V   M  
Sbjct: 289 KLAEADPILYHGPGKFNPAEGIRPSAKPSRKTYTQVFGEWLCDMAAADKRLIGVTPAMRE 348

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              +  F+++FP+RY+DVG+AEQHAVTF+ GLAC GLKP   I S FLQR YDQ+++DV 
Sbjct: 349 GSGMVEFEKRFPDRYYDVGIAEQHAVTFAGGLACEGLKPVVAIYSTFLQRGYDQLIHDVA 408

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q LPV F +  AGLVG+DG T  G +DI F+ C+PNM+VM P+DE+E   ++ T A   
Sbjct: 409 LQNLPVVFALDRAGLVGADGATHAGVYDIPFLRCIPNMMVMVPADENECRQLL-TTAFQQ 467

Query: 551 DRPVCFRYPRGAIVRTDL-PGYRGIPIEIGKGKVLVE-----GKDVALLGYGAMVQNCLK 604
           D P   RYPRGA V     P    +P  +GKG++  E     G+ VA++ +G+MV   L 
Sbjct: 468 DCPTAVRYPRGAGVGVATQPELTALP--VGKGEIRREGHARAGQRVAIMAFGSMVHPALT 525

Query: 605 ARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEG-SIGGFGSHVSHFIAL 663
           A   L     D TVA+ RF KPLD++LV++L  NH FL+TVEEG ++GG GS V     L
Sbjct: 526 AAEQL-----DATVANMRFVKPLDVELVKQLAANHDFLVTVEEGATMGGAGSAV-----L 575

Query: 664 DGLLDSGVKWRPIV--LPDNYIEHASPTQQLALAGL 697
           + L ++G++   +V  LPD +I+H  P   L+L GL
Sbjct: 576 EALAEAGIELPTLVLGLPDKFIDHGDPAHLLSLCGL 611


>gi|30249148|ref|NP_841218.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrosomonas europaea ATCC
           19718]
 gi|41016959|sp|Q82VD3.1|DXS_NITEU RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|30180467|emb|CAD85072.1| Transketolase [Nitrosomonas europaea ATCC 19718]
          Length = 614

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 261/627 (41%), Positives = 374/627 (59%), Gaps = 39/627 (6%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+LD +E P +L++L   +L QLA E+R+ L   V+ T   L S+L  VELT+ALH+VF 
Sbjct: 3   PLLDRIEIPAQLRTLKRNQLPQLADELRNFLVESVAGTGGHLSSNLGTVELTIALHYVFD 62

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG QTYAHKILTGRR+ +  LR + GI+G+  R ESEYD F   H   S+S
Sbjct: 63  TPFDRLIWDVGHQTYAHKILTGRRTGMARLRMQGGIAGFPRRDESEYDAFGTAHSSTSIS 122

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           A LGMAVA  +KG ++  + VI +G   AG A+EA++NAG +D+N++VILND+  S+ P 
Sbjct: 123 AALGMAVAARLKGVKQHAIAVIGDGAMSAGMAFEALNNAGVMDANLLVILNDNDMSISP- 181

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                   + AL++ L+++ S + +   R   + M   +   + E A + +E+ +GM+ P
Sbjct: 182 -------PVGALNNYLAKLMSGRFYATARRAGEKMLGVVPPVL-ELAKRAEEHVKGMVTP 233

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR----RAEDT 375
             STLFEE G  YIGP+DGH+++ L++ L  +  L   GP  +HVVT + +      ED 
Sbjct: 234 --STLFEEFGFNYIGPIDGHDLDILLTTLNNIKQLD--GPQFLHVVTRKGKGYKQAEEDP 289

Query: 376 QKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQ 435
                + K Q    D   +   +    Y   F + L   A KD  ++ +   M     L 
Sbjct: 290 ILYHGVGKFQ---PDQGIVSKPSAKLAYTQIFGDWLCDMAAKDSRLIGITPAMREGSGLV 346

Query: 436 LFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLP 495
            F +++P+RYFDVG+AEQHAVTF+AG AC GLKP   I S FLQRAYDQ+++DV  Q LP
Sbjct: 347 RFSKEYPDRYFDVGIAEQHAVTFAAGAACEGLKPVVAIYSTFLQRAYDQLIHDVAIQNLP 406

Query: 496 VRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVC 555
           V F I  AGLVG+DGPT  G+FD++++ C+PN+ VM P+DE+E   M+ T   + D P  
Sbjct: 407 VVFAIDRAGLVGADGPTHAGSFDLSYLRCIPNITVMTPADENECRQMLYTAFQL-DTPAA 465

Query: 556 FRYPRGAIVRTDLPGYR----GIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSK 611
            RYPRG+      PG +       I +GKG++  +GK +ALL +G+M+  CL+A   L  
Sbjct: 466 VRYPRGSG-----PGVQIQQEMQTIPLGKGEIRRQGKQIALLAFGSMLTPCLEAGDEL-- 518

Query: 612 LGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSG 670
              D TV + RF KPLD +LV  L   H  L+T+EE +I GG GS V   ++    LD  
Sbjct: 519 ---DATVVNMRFVKPLDQELVATLAAEHELLVTIEENTIMGGAGSAVMESLS---SLDKN 572

Query: 671 VKWRPIVLPDNYIEHASPTQQLALAGL 697
           V+   + LPD++I+   P   L+  GL
Sbjct: 573 VRLLQLGLPDSFIDQGDPAHMLSDCGL 599


>gi|402569608|ref|YP_006618952.1| deoxyxylulose-5-phosphate synthase [Burkholderia cepacia GG4]
 gi|402250805|gb|AFQ51258.1| deoxyxylulose-5-phosphate synthase [Burkholderia cepacia GG4]
          Length = 634

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 276/641 (43%), Positives = 380/641 (59%), Gaps = 46/641 (7%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L  +++P  L+ L  ++L+ LA E+R+ +   VSKT   L S+L  VELT+ALH+VF+ 
Sbjct: 4   LLKTIDDPADLRRLDRRQLQPLADELRAFVLDSVSKTGGHLSSNLGTVELTIALHYVFNT 63

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+I+WDVG QTY HKILTGRR  +H+LR+ DGISG+  RSESEYD F   H   S+SA
Sbjct: 64  PNDRIVWDVGHQTYPHKILTGRRDQMHSLRQYDGISGFPRRSESEYDTFGTAHSSTSISA 123

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPK 259
            LGMA+   + G     + VI +G   AG A+EAM+NAG   D+ ++VILND+  S+ P 
Sbjct: 124 ALGMAIGSQLNGDDRFSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDNDMSISP- 182

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                   + AL+  L+R+ S + +   R   + +   +   + E A K++E+A+GM+ P
Sbjct: 183 -------PVGALNRHLARLMSGRFYAAARAGVERVLS-VAPPVLELARKLEEHAKGMVVP 234

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             +TLFEE G  YIGP+DGH+++ LI  LQ +  L   GP  +HVVT   ++ +  + +E
Sbjct: 235 --ATLFEEFGFNYIGPIDGHDLDSLIPTLQNIREL--RGPQFLHVVT---KKGQGYKLAE 287

Query: 380 AIEKQQEGASDSNSLPFGNYS-----RTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
           A      G    N       S     +TY   F E L  EAE+D  +V +   M     +
Sbjct: 288 ADPVLYHGPGKFNPAEGIKPSTTPAKKTYTQVFGEWLCDEAERDSRVVGITPAMREGSGM 347

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F+++F +RY+DVG+AEQHAVTF+ G+A  GLKP   I S FLQRAYDQ+++DV  Q L
Sbjct: 348 VEFEKRFKDRYYDVGIAEQHAVTFAGGMATEGLKPVVAIYSTFLQRAYDQLIHDVALQNL 407

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PV F I  AGLVG+DG T  GA+D+ FM C+PNM +MA SDEDE   M+ T A     P 
Sbjct: 408 PVVFAIDRAGLVGADGATHAGAYDLAFMRCIPNMTIMAASDEDECRQMLHT-ALQQPNPT 466

Query: 555 CFRYPRGAIVR-TDLPGYRGIPIEIGKGKVL-----VEGKDVALLGYGAMVQNCLKARAL 608
             RYPRGA      +  +  IP  +GKG+V       EGK VA+L +G MV   L A   
Sbjct: 467 AVRYPRGAGTGVATVKEFTEIP--LGKGEVRRRTSQPEGKRVAILAFGTMVAPSLAAAEE 524

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLL 667
           L     D TVA+ RF KP+D  LVREL + H  L+TVEEG + GG GS       ++ L+
Sbjct: 525 L-----DATVANMRFVKPVDAALVRELAETHDCLVTVEEGCVMGGAGS-----ACVEALM 574

Query: 668 DSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAAT 705
           +SGV  RP++   LPD +I+H  P + L+  GL G  IA +
Sbjct: 575 ESGV-IRPVIQLGLPDQFIDHGDPAKLLSQCGLDGAGIAKS 614


>gi|114320537|ref|YP_742220.1| 1-deoxy-D-xylulose-5-phosphate synthase [Alkalilimnicola ehrlichii
           MLHE-1]
 gi|122311762|sp|Q0A8V7.1|DXS_ALHEH RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|114226931|gb|ABI56730.1| 1-deoxy-D-xylulose-5-phosphate synthase [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 628

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 265/632 (41%), Positives = 374/632 (59%), Gaps = 32/632 (5%)

Query: 69  IDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAV 128
           IDD+       P+L  V +P  L++L    L  LA E+R  L   V+++   L + L AV
Sbjct: 5   IDDY-------PLLAQVPDPEALRTLPAHRLPALAKELRHYLLHSVARSGGHLAAGLGAV 57

Query: 129 ELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDP 188
           ELT+ALH+VF+ P D+++WDVG Q Y HKILTGRR  + T+RK  G++G+  R+ES YD 
Sbjct: 58  ELTLALHYVFNTPEDRLVWDVGHQCYPHKILTGRRERLGTIRKYGGLAGFPKRAESPYDT 117

Query: 189 FNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVI 248
           F  GH   S+SA LGMA+A    G++   V +I +G   AG+A+EAM++AG   ++++V+
Sbjct: 118 FGVGHSSTSISAALGMALAARQAGEQRKAVAIIGDGGMTAGEAFEAMNHAGDAGADLLVV 177

Query: 249 LNDSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAK 308
           LND+        E S   ++ ALS  L+RI S + + QLR  +K + +R+   +HE A +
Sbjct: 178 LNDN--------EMSISENVGALSQHLTRILSGRWYHQLRSGSKEVLRRLPPPVHELARR 229

Query: 309 VDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEE 368
            +E+ +GM+ P   TLFEELG  Y GPVDGHN++ L+ VL  +A     GP L+HVVT +
Sbjct: 230 TEEHLKGMVVP--GTLFEELGFQYFGPVDGHNVDALVEVLGNLAH--QRGPRLLHVVTCK 285

Query: 369 NRRAEDTQKSEAIEKQQEGASD-SNSLP-FGNYSRTYDDCFIEALVMEAEKDKDIVVVHA 426
            +     ++ + I     G  D    LP     S  Y+  F   L   AE+D  +V +  
Sbjct: 286 GKGYRPAEQ-DPIAYHGVGQFDPEQGLPKKSGGSLAYNQVFGRWLCAMAEQDPRLVAITP 344

Query: 427 GMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVV 486
            M     +  +  +FPERY DVG+AEQHAVT +AGLAC  +KP   I S FLQR YDQ+V
Sbjct: 345 AMREGSGMVEYARRFPERYHDVGIAEQHAVTLAAGLACESVKPVLAIYSTFLQRGYDQLV 404

Query: 487 NDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATV 546
           +DV  Q LPV F +  AGLVG+DGPT  G+FD++++ C+PNM + APSDE E   +++T 
Sbjct: 405 HDVALQNLPVLFAVDRAGLVGADGPTHHGSFDLSYLRCVPNMTIAAPSDEAECWRLLST- 463

Query: 547 ASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
               D P   RYPRG+     LP     P+ IGKG     G+ +A+L +G +V       
Sbjct: 464 GYHHDGPFAVRYPRGSGPGAALPEADLDPLAIGKGVCRRRGRRIAVLAFGTLV-----VP 518

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG 665
           AL     +D+TVAD RF +PLD  L+REL   H  L+TVEE ++ GG GS VS ++A  G
Sbjct: 519 ALAVAEALDLTVADMRFVRPLDEALIRELADTHDLLVTVEENAVAGGAGSGVSEYLARAG 578

Query: 666 LLDSGVKWRPIVLPDNYIEHASPTQQLALAGL 697
           L    V  R + LPD +++H +P + LA  GL
Sbjct: 579 L---DVPVRHLGLPDRFVDHGTPAELLAEVGL 607


>gi|422667497|ref|ZP_16727360.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           aptata str. DSM 50252]
 gi|330978747|gb|EGH77972.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           aptata str. DSM 50252]
          Length = 630

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 272/649 (41%), Positives = 382/649 (58%), Gaps = 49/649 (7%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD  + P  L+ L   EL+ LA E+R EL   V +T     + L  +ELT+ALH+VF
Sbjct: 15  TPLLDRADTPHGLRRLGEAELETLADELRLELLYSVGQTGGHFGAGLGVIELTIALHYVF 74

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++ DVG Q Y HKILTGRR+ + TLR+KDG++ +  RSESEYD F  GH   S+
Sbjct: 75  DTPDDRLVGDVGHQAYPHKILTGRRARMSTLRQKDGVAAFPRRSESEYDTFGVGHSSTSI 134

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LGMA+A  ++G     + VI +G   AG A+EA+++A  + ++M+VILND+  S+  
Sbjct: 135 SAALGMAIASRLQGSERKSIAVIGDGALTAGMAFEALNHAPEVAADMLVILNDNDMSI-- 192

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                   ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+GM+ 
Sbjct: 193 ------SRNVGGLSNYLAKILSSRTYSSMREGSKKVLSRL-PGAWEIARRTEEYAKGMLV 245

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAE----D 374
           P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +HVVT++ +  E    D
Sbjct: 246 P--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDL--KGPQFLHVVTKKGKGFEPAEVD 301

Query: 375 TQKSEAIEKQQ----EGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
                AI K +      A    S P       Y   F + +   A+ D  +V +   M+ 
Sbjct: 302 PIGYHAITKLEPLNAPAAQKKISAP------KYSGVFGQWICDMADADARLVGITPAMKE 355

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L  F E+FPERYFDV +AEQHAVT +AG+AC G KP   I S FLQR YDQ+++DV 
Sbjct: 356 GSDLVAFSERFPERYFDVAIAEQHAVTLAAGMACEGSKPVVAIYSTFLQRGYDQLIHDVA 415

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q L V F I  AGLVG DGPT  G+FD++++ C+P M+VM PSDE+EL  +++T   + 
Sbjct: 416 VQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDENELRKLLST-GYLH 474

Query: 551 DRPVCFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
             P   RYPRG    A++  +L      P+EIGKG V  +G+ VA+L +G  +     A 
Sbjct: 475 TGPAAVRYPRGTGPNAVIEANLE-----PVEIGKGVVRRQGQGVAILAFGVQL-----AE 524

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG 665
           AL+    +D TV D RF KPLD  LV E   NH  L+T+EE ++ GG G+ VS F+A   
Sbjct: 525 ALVVAEKLDATVIDMRFVKPLDEALVSEAAANHELLVTLEENAVMGGAGAAVSEFLARAN 584

Query: 666 LLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAAT---ALSLLG 711
           +L S +    + LPD Y+EHA P Q L   GL    I A     L+L+G
Sbjct: 585 ILKSVLH---LGLPDVYVEHAKPAQMLTECGLDAQGIEAAINERLALIG 630


>gi|397698473|ref|YP_006536356.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas putida
           DOT-T1E]
 gi|397335203|gb|AFO51562.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas putida
           DOT-T1E]
          Length = 631

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 268/631 (42%), Positives = 379/631 (60%), Gaps = 44/631 (6%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD  + P  L+ L   +L+ LA E+R EL   V +T     + L  +ELT+ALH+VF
Sbjct: 15  TPLLDRADTPAGLRRLAEADLETLADELRQELLYTVGQTGGHFGAGLGVIELTIALHYVF 74

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR+ + +LR+KDGI+ +  RSESEYD F  GH   S+
Sbjct: 75  DTPDDRLVWDVGHQAYPHKILTGRRNRMLSLRQKDGIAAFPRRSESEYDTFGVGHSSTSI 134

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LGMA+A  ++      + VI +G   AG A+EA+++A  ++++M+VILND+  S+  
Sbjct: 135 SAALGMAIAARLQNSARKSIAVIGDGALTAGMAFEALNHAQEVNADMLVILNDNDMSI-- 192

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                   ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+GM+ 
Sbjct: 193 ------SRNVGGLSNYLAKILSSRTYASMREGSKKVLSRL-PGAWEIARRTEEYAKGMLV 245

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---RAE-D 374
           P   TLFEELG  YIGP+DGH++  +I+ L+ +  L   GP  +HVVT++ +    AE D
Sbjct: 246 P--GTLFEELGWNYIGPIDGHDLPTMIATLRNMRDL--KGPQFLHVVTKKGKGFAPAEID 301

Query: 375 TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
                AI K +   +D  + P       Y   F + L   A  D  +V +   M+    L
Sbjct: 302 PIGYHAITKLE--PADKPAAPKKASGPKYSAVFGQWLCDMAAADNRLVGITPAMKEGSDL 359

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F E++PERYFDV +AEQHAVT +AG+AC G KP   I S FLQRAYDQ+++DV  Q L
Sbjct: 360 VDFSERYPERYFDVAIAEQHAVTLAAGMACEGSKPVVAIYSTFLQRAYDQLIHDVAVQNL 419

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
            V F I  AGLVG DGPT  G++D++++ C+P M+VM PSDE+EL  M++T   + + P 
Sbjct: 420 DVLFAIDRAGLVGEDGPTHAGSYDLSYLRCIPGMLVMTPSDENELRKMLST-GHLYNGPA 478

Query: 555 CFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLS 610
             RYPRG    A +  DL      P+EIGKG V  +G+ VALL +G  +     A A+  
Sbjct: 479 AVRYPRGTGPNAPISGDLQ-----PLEIGKGVVRRQGEKVALLVFGVQL-----AEAMQV 528

Query: 611 KLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDS 669
              I+ TV D RF KPLD  LV EL  +H  L+T+EE +I GG G+ V  F+A   +L  
Sbjct: 529 AEQINATVVDMRFVKPLDEALVLELAGSHELLVTIEENAIMGGAGAAVGEFLASQAVL-- 586

Query: 670 GVKWRPIV---LPDNYIEHASPTQQLALAGL 697
               +P++   LPD Y+EHA P Q LA  GL
Sbjct: 587 ----KPLLHLGLPDIYVEHAKPAQMLAECGL 613


>gi|387904758|ref|YP_006335096.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia sp. KJ006]
 gi|387579650|gb|AFJ88365.1| 1-deoxy-D-xylulose 5-phosphate synthase [Burkholderia sp. KJ006]
          Length = 634

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 279/647 (43%), Positives = 382/647 (59%), Gaps = 58/647 (8%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L  +++P  L+ L  ++L+ LA E+R+ +   VSKT   L S+L  VELT+ALH+VF+ 
Sbjct: 4   LLKTIDDPADLRRLDRRQLQPLADELRAFVLDSVSKTGGHLSSNLGTVELTIALHYVFNT 63

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+I+WDVG QTY HKILTGRR  +HTLR+ DGISG+  RSESEYD F   H   S+SA
Sbjct: 64  PNDRIVWDVGHQTYPHKILTGRRDQMHTLRQYDGISGFPRRSESEYDTFGTAHSSTSISA 123

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPK 259
            LGMA+   + G     + VI +G   AG A+EAM+NAG   D+ ++VILND+  S+ P 
Sbjct: 124 ALGMAIGSQLNGDDRFSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDNDMSISP- 182

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                   + AL+  L+R+ S + +   R   + +   +   + E A K++E+A+GM+ P
Sbjct: 183 -------PVGALNRHLARLMSGRFYAAARAGVERVLS-VAPPVLELARKLEEHAKGMVVP 234

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             +TLFEE G  YIGP+DGH+++ LI  LQ +  L   GP  +HVVT   ++ +  + +E
Sbjct: 235 --ATLFEEFGFNYIGPIDGHDLDSLIPTLQNIREL--RGPQFLHVVT---KKGQGYKLAE 287

Query: 380 AIEKQQEGASDSNSL----PFGNYS-RTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
           A      G    N      P    + +TY   F E L  EAE+D  +V +   M     +
Sbjct: 288 ADPVLYHGPGKFNPAEGIKPSATPAKKTYTQVFGEWLCDEAERDSRVVGITPAMREGSGM 347

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F+++F +RY+DVG+AEQHAVTF+ GLA  GLKP   I S FLQRAYDQ+++DV  Q L
Sbjct: 348 VEFEKRFKDRYYDVGIAEQHAVTFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNL 407

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PV F I  AGLVG+DG T  GA+D+ FM C+PNM +MA SDE+E   M+ T A     P 
Sbjct: 408 PVVFAIDRAGLVGADGATHAGAYDLAFMRCIPNMTIMAASDENECRQMLHT-ALQQPNPT 466

Query: 555 CFRYPRG-----AIVR--TDLPGYRGIPIEIGKGKVL-----VEGKDVALLGYGAMVQNC 602
             RYPRG     A V+  T LP        IGKG+V       EGK VA+L +G MV   
Sbjct: 467 AVRYPRGSGTGVATVKEFTALP--------IGKGEVRRRSSQPEGKRVAILAFGTMVAPS 518

Query: 603 LKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFI 661
           L A   L     D TVA+ RF KP+D  LVREL + H +L+TVEEG + GG GS      
Sbjct: 519 LAAADEL-----DATVANMRFVKPIDAALVRELAETHDYLVTVEEGCLMGGAGS-----A 568

Query: 662 ALDGLLDSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAAT 705
            ++ L++SGV  RP++   LPD +I+H  P + L+  GL    IA +
Sbjct: 569 CVEALMESGV-IRPVLQLGLPDQFIDHGDPAKLLSQCGLDSAGIAKS 614


>gi|339485459|ref|YP_004699987.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas putida S16]
 gi|338836302|gb|AEJ11107.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas putida S16]
          Length = 631

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 269/646 (41%), Positives = 384/646 (59%), Gaps = 44/646 (6%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD  + P  L+ L   +L+ LA E+R EL   V +T     + L  +ELT+ALH+VF
Sbjct: 15  TPLLDRADTPAGLRRLAEADLETLADELRQELLYTVGQTGGHFGAGLGVIELTIALHYVF 74

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR+ + +LR+K GI+ +  RSESEYD F  GH   S+
Sbjct: 75  DTPDDRLVWDVGHQAYPHKILTGRRNRMLSLRQKGGIAAFPRRSESEYDTFGVGHSSTSI 134

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LGMA+A  ++      + VI +G   AG A+EA+++A  ++++M+VILND+  S+  
Sbjct: 135 SAALGMAIAARLQNSDRKSIAVIGDGALTAGMAFEALNHAQEVNADMLVILNDNDMSI-- 192

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                   ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+GM+ 
Sbjct: 193 ------SRNVGGLSNYLAKILSSRTYASMREGSKKVLSRL-PGAWEIARRTEEYAKGMLV 245

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---RAE-D 374
           P   TLFEELG  YIGP+DGH++  +I+ L+ +  L   GP  +HVVT++ +    AE D
Sbjct: 246 P--GTLFEELGWNYIGPIDGHDLPTMIATLRNMRDL--KGPQFLHVVTKKGKGFAPAEID 301

Query: 375 TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
                AI K +   +D  + P       Y   F + L   A  D  +V +   M+    L
Sbjct: 302 PIGYHAITKLE--PADKPAAPKKASGPKYSAVFGQWLCDMAAADNRLVGITPAMKEGSDL 359

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F E++PERYFDV +AEQHAVT +AG+AC G KP   I S FLQRAYDQ+++DV  Q L
Sbjct: 360 VEFSERYPERYFDVAIAEQHAVTLAAGMACEGSKPVVAIYSTFLQRAYDQLIHDVAVQNL 419

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
            V F I  AGLVG DGPT  G++D++++ C+P M+VM PSDE+EL  M++T   + + P 
Sbjct: 420 DVLFAIDRAGLVGEDGPTHAGSYDLSYLRCIPGMLVMTPSDENELRKMLST-GHLYNGPA 478

Query: 555 CFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLS 610
             RYPRG    A +  DL      P+EIGKG V  +G+ VALL +G  +     A A+  
Sbjct: 479 AVRYPRGTGPNAPISGDLE-----PLEIGKGVVRRQGEKVALLVFGVQL-----AEAMQV 528

Query: 611 KLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDS 669
              I+ TV D RF KPLD  LV EL  +H  L+T+EE +I GG G+ V  F+A   ++  
Sbjct: 529 AEQINATVVDMRFVKPLDEALVLELAASHELLVTIEENAIMGGAGAAVGEFLASQAIV-- 586

Query: 670 GVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
               +P++   LPD Y+EHA P Q LA  GL    I A+  + + R
Sbjct: 587 ----KPLLHLGLPDIYVEHAKPAQMLAECGLDAAGIEASVTARMAR 628


>gi|295700828|ref|YP_003608721.1| deoxyxylulose-5-phosphate synthase [Burkholderia sp. CCGE1002]
 gi|295440041|gb|ADG19210.1| deoxyxylulose-5-phosphate synthase [Burkholderia sp. CCGE1002]
          Length = 650

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 277/639 (43%), Positives = 378/639 (59%), Gaps = 46/639 (7%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L  +++P  L+ L  ++L+ LA E+R+ +   VS+T   L S+L  VELT+ALH+VF  
Sbjct: 19  LLKTIDDPAALRRLDRRQLQPLADELRAFVLDSVSQTGGHLSSNLGTVELTIALHYVFDT 78

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+I+WDVG QTY HKILTGRR  +HTLR+  GISG+  R ESEYD F   H   S+SA
Sbjct: 79  PHDRIVWDVGHQTYPHKILTGRRDQMHTLRQLGGISGFPKRDESEYDTFGTAHSSTSISA 138

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDS-NMIVILNDSRHSLHPK 259
            LGMA+A  ++G     + VI +G   AG A+EAM+NAG  D   ++VILND+  S+ P 
Sbjct: 139 ALGMAIASKLQGDNRMGIAVIGDGAMTAGMAFEAMNNAGVEDDVPLLVILNDNDMSISP- 197

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                   + AL+  L+R+ S + +   R   + +  R+   + + A K++E+A+GMI P
Sbjct: 198 -------PVGALNRHLARLMSGRFYAAARAGVERVL-RVAPPVLDLARKLEEHAKGMIVP 249

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             +TLFEE G  YIGP+DGH+++ LI  LQ +  L   GP  +HVVT   ++ +  + +E
Sbjct: 250 --ATLFEEFGFNYIGPIDGHDLDSLIPTLQNIKEL--RGPQFLHVVT---KKGQGYKLAE 302

Query: 380 AIEKQQEGASDSNSL----PFGNYS-RTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
           A      G    N      P    S +TY   F E L   AE D  +V +   M     +
Sbjct: 303 ADPVLYHGPGKFNPAEGIKPAATPSKKTYTQVFGEWLCDAAELDSRVVGITPAMREGSGM 362

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F+++FP+RYFDVG+AEQHAVTF+ GLA  G+KP   I S FLQRAYDQ+++DV  Q L
Sbjct: 363 VEFEKRFPDRYFDVGIAEQHAVTFAGGLAADGMKPVVAIYSTFLQRAYDQLIHDVALQNL 422

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PV F I  AGLVG+DG T  GA+D+ FM C+PNM VMAPSDE+E   M+ T A     P 
Sbjct: 423 PVVFAIDRAGLVGADGATHAGAYDLAFMRCIPNMTVMAPSDENECRQMLYT-ALQQSHPT 481

Query: 555 CFRYPRGAIVRTDLPGYRGI-PIEIGKGKVLVE-----GKDVALLGYGAMVQNCLKARAL 608
             RYPRGA   T +   + +  + +GKG+V  E     GK +A+L +G MV   L A   
Sbjct: 482 AVRYPRGA--GTGVATIKQMAALPLGKGEVRRETSAPAGKRIAILAFGTMVAPSLAAAEQ 539

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLL 667
                 D TVA+ RF KPLD +LVR+L + H  ++TVEEG I GG GS       ++ LL
Sbjct: 540 F-----DATVANMRFVKPLDTELVRKLAETHDAIVTVEEGCIMGGAGS-----ACVEALL 589

Query: 668 DSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIA 703
            SGV  RP++   LPD +I+H  P + LA  GL    IA
Sbjct: 590 ASGV-MRPVLQLGLPDRFIDHGDPAKLLAACGLDAAGIA 627


>gi|226941242|ref|YP_002796316.1| 1-deoxy-D-xylulose-5-phosphate synthase [Laribacter hongkongensis
           HLHK9]
 gi|254782077|sp|C1DAW8.1|DXS_LARHH RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|226716169|gb|ACO75307.1| Dxs [Laribacter hongkongensis HLHK9]
          Length = 622

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 260/624 (41%), Positives = 375/624 (60%), Gaps = 30/624 (4%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD ++ P  L+ L  K+L QLA E+R  L   VS+T     S+L ++ELT+ALH+V+
Sbjct: 4   TPLLDTIQIPADLRELDRKQLPQLARELRDFLVDSVSQTGGHFASNLGSIELTIALHYVY 63

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+++WDVG QTY HKILTGRR  +HT+R+K G++G+  R ESEYD F  GH   S+
Sbjct: 64  NTPDDRLVWDVGHQTYPHKILTGRRDRMHTMRQKGGLAGFPKRDESEYDTFGVGHSSTSI 123

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
            A LGMAVA    G    +V +I +G   AGQA+EA++NAG  D++++VILND+  S+ P
Sbjct: 124 GAALGMAVAARQTGSDRRVVAIIGDGAMTAGQAFEALNNAGDSDTDLLVILNDNDMSISP 183

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRG--MHEWAAKVDEYARGM 316
                   ++ AL+   +R+ S + +  ++    G  + +G    + + A K +E  +G+
Sbjct: 184 --------NVGALNHYFTRLMSGRFYATMK---SGTNRVLGMAPPLQKLAHKAEEQVKGL 232

Query: 317 IGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQ 376
           + P  +TLFEE G  Y+GPVDGH++  L++ LQ +  L   GP  +HVVT++    +  +
Sbjct: 233 LTP--ATLFEEFGFNYLGPVDGHDLGVLVNTLQNIRQL--KGPQFLHVVTKKGHGYKLAE 288

Query: 377 KSEAIEKQQEGASDSNSL--PFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
           K           S  N L    G+    Y   F + L   A +D+ +V +   M     +
Sbjct: 289 KDPISYHGVSKFSPENGLVSKSGSSKPGYTQVFGDWLCDMAAQDERLVGITPAMREGSGM 348

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F++++P+RYFDVG+AEQHAVTF+AG+AC GLKP   I S FLQRAYDQ+++DV  Q L
Sbjct: 349 VRFEKEYPDRYFDVGIAEQHAVTFAAGMACDGLKPVVAIYSTFLQRAYDQLIHDVALQNL 408

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PV F I  AGLVG+DGPT  GAFD++++ C+PNM+VMAPSDE+E   ++ T A + D P 
Sbjct: 409 PVVFAIDRAGLVGADGPTHAGAFDLSYLRCIPNMVVMAPSDENECRQLLYT-AFLHDGPT 467

Query: 555 CFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGI 614
             RYPRG     + P      + +G+G +  +GK +A+L +G+MV   L A   L     
Sbjct: 468 AVRYPRGTGPGCE-PVAAMTALPLGQGTLRRQGKGIAILAFGSMVHPALAAADQLDA--- 523

Query: 615 DVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVKW 673
             +VAD RF KPLD  L+R+L  +H  L+TVEE  + GG GS V   +A  G+    V  
Sbjct: 524 --SVADMRFVKPLDTALIRQLAASHELLVTVEENVVMGGTGSAVLETLAAAGIT---VPV 578

Query: 674 RPIVLPDNYIEHASPTQQLALAGL 697
             + LPD+Y+EH  P   LA  GL
Sbjct: 579 LNLGLPDHYVEHGDPALLLADCGL 602


>gi|134292966|ref|YP_001116702.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia vietnamiensis
           G4]
 gi|134136123|gb|ABO57237.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia vietnamiensis
           G4]
          Length = 646

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 279/647 (43%), Positives = 382/647 (59%), Gaps = 58/647 (8%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L  +++P  L+ L  ++L+ LA E+R+ +   VSKT   L S+L  VELT+ALH+VF+ 
Sbjct: 16  LLKTIDDPADLRRLDRRQLQPLADELRAFVLDSVSKTGGHLSSNLGTVELTIALHYVFNT 75

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+I+WDVG QTY HKILTGRR  +HTLR+ DGISG+  RSESEYD F   H   S+SA
Sbjct: 76  PNDRIVWDVGHQTYPHKILTGRRDQMHTLRQYDGISGFPRRSESEYDTFGTAHSSTSISA 135

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPK 259
            LGMA+   + G     + VI +G   AG A+EAM+NAG   D+ ++VILND+  S+ P 
Sbjct: 136 ALGMAIGSQLNGDDRFSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDNDMSISP- 194

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                   + AL+  L+R+ S + +   R   + +   +   + E A K++E+A+GM+ P
Sbjct: 195 -------PVGALNRHLARLMSGRFYAAARAGVERVLS-VAPPVLELARKLEEHAKGMVVP 246

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             +TLFEE G  YIGP+DGH+++ LI  LQ +  L   GP  +HVVT   ++ +  + +E
Sbjct: 247 --ATLFEEFGFNYIGPIDGHDLDSLIPTLQNIREL--RGPQFLHVVT---KKGQGYKLAE 299

Query: 380 AIEKQQEGASDSNSL----PFGNYS-RTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
           A      G    N      P    + +TY   F E L  EAE+D  +V +   M     +
Sbjct: 300 ADPVLYHGPGKFNPAEGIKPSATPAKKTYTQVFGEWLCDEAERDSRVVGITPAMREGSGM 359

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F+++F +RY+DVG+AEQHAVTF+ GLA  GLKP   I S FLQRAYDQ+++DV  Q L
Sbjct: 360 VEFEKRFKDRYYDVGIAEQHAVTFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNL 419

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PV F I  AGLVG+DG T  GA+D+ FM C+PNM +MA SDE+E   M+ T A     P 
Sbjct: 420 PVVFAIDRAGLVGADGATHAGAYDLAFMRCIPNMTIMAASDENECRQMLHT-ALQQPNPT 478

Query: 555 CFRYPRG-----AIVR--TDLPGYRGIPIEIGKGKVL-----VEGKDVALLGYGAMVQNC 602
             RYPRG     A V+  T LP        IGKG+V       EGK VA+L +G MV   
Sbjct: 479 AVRYPRGSGTGVATVKEFTALP--------IGKGEVRRRSSQPEGKRVAILAFGTMVAPS 530

Query: 603 LKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFI 661
           L A   L     D TVA+ RF KP+D  LVREL + H +L+TVEEG + GG GS      
Sbjct: 531 LAAADEL-----DATVANMRFVKPIDAALVRELAETHDYLVTVEEGCLMGGAGS-----A 580

Query: 662 ALDGLLDSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAAT 705
            ++ L++SGV  RP++   LPD +I+H  P + L+  GL    IA +
Sbjct: 581 CVEALMESGV-IRPVLQLGLPDQFIDHGDPAKLLSQCGLDSAGIAKS 626


>gi|170691119|ref|ZP_02882285.1| deoxyxylulose-5-phosphate synthase [Burkholderia graminis C4D1M]
 gi|170144368|gb|EDT12530.1| deoxyxylulose-5-phosphate synthase [Burkholderia graminis C4D1M]
          Length = 635

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 277/644 (43%), Positives = 380/644 (59%), Gaps = 52/644 (8%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L  +++P  L+ L  ++L+ LA E+R+ +   VS+T   L S+L  VELT+ALH+VF  
Sbjct: 4   LLKTIDDPAALRRLDRRQLQPLADELRAFVLDSVSQTGGHLSSNLGTVELTIALHYVFDT 63

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+I+WDVG QTY HKILTGRR  +HTLR+  GISG+  R ESEYD F   H   S+SA
Sbjct: 64  PHDRIVWDVGHQTYPHKILTGRRERMHTLRQLGGISGFPKRDESEYDTFGTAHSSTSISA 123

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDS-NMIVILNDSRHSLHPK 259
            LGMA+A  ++G     + VI +G   AG A+EAM+NAG  D   ++VILND+  S+ P 
Sbjct: 124 ALGMAIASKLQGDNRMGIAVIGDGAMTAGMAFEAMNNAGVEDDVPLLVILNDNDMSISP- 182

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                   + AL+  L+R+ S + +   R   + +  R+   M + A K++E+A+GMI P
Sbjct: 183 -------PVGALNRHLARLMSGRFYAAARAGVERVL-RVAPPMLDLARKLEEHAKGMIVP 234

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             +TLFEE G  YIGP+DGH+++ LI  LQ +  L   GP  +HVVT   ++ +  + +E
Sbjct: 235 --ATLFEEFGFNYIGPIDGHDLDSLIPTLQNIKEL--RGPQFLHVVT---KKGQGYKLAE 287

Query: 380 AIEKQQEGASDSN--------SLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMD 431
           A      G    N        S P     +TY   F E L   AE D  +V +   M   
Sbjct: 288 ADPVLYHGPGKFNPAEGIKPASAP---SKKTYTQVFGEWLCDAAELDARVVGITPAMREG 344

Query: 432 LSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQ 491
             +  F+++FP+RYFDVG+AEQHAVTF+ GLA  G+KP   I S FLQRAYDQ+++DV  
Sbjct: 345 SGMVEFEKRFPDRYFDVGIAEQHAVTFAGGLAADGMKPVVAIYSTFLQRAYDQLIHDVAL 404

Query: 492 QRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDD 551
           Q LPV F I  AGLVG+DG T  GA+D+ FM C+PNM+VM PSDE+E   M+ T A    
Sbjct: 405 QNLPVVFAIDRAGLVGADGATHAGAYDLAFMRCIPNMMVMVPSDENESRQMLYT-ALQQS 463

Query: 552 RPVCFRYPRGAIVRTDLPGYRGI-PIEIGKGKVLVE-----GKDVALLGYGAMVQNCLKA 605
            P   RYPRGA   T +   + +  + +GKG+V  E     GK +A+L +G MV   L A
Sbjct: 464 CPTAVRYPRGA--GTGVATVKQMAALPVGKGEVRRETSQPAGKRIAILAFGTMVAPSLAA 521

Query: 606 RALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALD 664
              L     D TVA+ RF KPLD  LVR+L + H  ++TVEEG + GG GS       ++
Sbjct: 522 AEQL-----DATVANMRFVKPLDADLVRQLAETHDAIVTVEEGCVMGGAGS-----ACVE 571

Query: 665 GLLDSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAAT 705
            LL+SGV  RP++   LPD +I+H  P + LA  GL    IA +
Sbjct: 572 ALLESGV-MRPVLQLGLPDRFIDHGDPAKLLAACGLDAAGIAKS 614


>gi|221197058|ref|ZP_03570105.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia multivorans
           CGD2M]
 gi|221203730|ref|ZP_03576748.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia multivorans
           CGD2]
 gi|221212348|ref|ZP_03585325.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia multivorans
           CGD1]
 gi|421468344|ref|ZP_15916896.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia multivorans
           ATCC BAA-247]
 gi|421476964|ref|ZP_15924817.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia multivorans
           CF2]
 gi|221167447|gb|EED99916.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia multivorans
           CGD1]
 gi|221175896|gb|EEE08325.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia multivorans
           CGD2]
 gi|221183612|gb|EEE16012.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia multivorans
           CGD2M]
 gi|400227279|gb|EJO57286.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia multivorans
           CF2]
 gi|400232199|gb|EJO61835.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia multivorans
           ATCC BAA-247]
          Length = 634

 Score =  461 bits (1185), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 279/647 (43%), Positives = 382/647 (59%), Gaps = 58/647 (8%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L  +++P  L+ L  ++L+ LA E+R+ +   VSKT   L S+L  VELT+ALH+VF+ 
Sbjct: 4   LLKTIDDPADLRRLDRRQLQPLADELRAFVLDSVSKTGGHLSSNLGTVELTIALHYVFNT 63

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+I+WDVG QTY HKILTGRR  + TLR+  GISG+  RSESEYD F   H   S+SA
Sbjct: 64  PNDRIVWDVGHQTYPHKILTGRRDEMPTLRQLGGISGFPRRSESEYDTFGTAHSSTSISA 123

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPK 259
            LGMA+   + G     + VI +G   AG A+EAM+NAG   D+ ++VILND+  S+ P 
Sbjct: 124 ALGMAIGSQLNGDDRFSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDNDMSISP- 182

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                   + AL+  L+R+ S + +   R   + +   +   + E A K++E+A+GM+ P
Sbjct: 183 -------PVGALNRHLARLMSGRFYAAARAGVERVLS-VAPPVLELARKLEEHAKGMVVP 234

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             +TLFEE G  YIGP+DGH+++ LI  LQ +  L   GP  +HVVT   ++ +  + +E
Sbjct: 235 --ATLFEEFGFNYIGPIDGHDLDSLIPTLQNIREL--RGPQFLHVVT---KKGQGYKLAE 287

Query: 380 AIEKQQEGASDSNSL----PFGNYS-RTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
           A      G    N      P    + +TY   F E L  EAE+D  +V +   M     +
Sbjct: 288 ADPVLYHGPGKFNPAEGIKPSATPAKKTYTQVFGEWLCDEAERDSRVVGITPAMREGSGM 347

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F+++F +RY+DVG+AEQHAVTF+ GLA  GLKP   I S FLQRAYDQ+++DV  Q L
Sbjct: 348 VEFEKRFKDRYYDVGIAEQHAVTFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNL 407

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PV F I  AGLVG+DG T  GA+D+ FM C+PNM +MA SDE+E   M+ T A     P 
Sbjct: 408 PVVFAIDRAGLVGADGATHAGAYDLAFMRCIPNMTIMAASDENECRQMLHT-ALQQPNPT 466

Query: 555 CFRYPRG-----AIVR--TDLPGYRGIPIEIGKGKVL-----VEGKDVALLGYGAMVQNC 602
             RYPRG     A V+  T+LP        IGKG+V       EGK +A+L +G MV   
Sbjct: 467 AVRYPRGAGTGVATVKEFTELP--------IGKGEVRRRTSQPEGKRIAILAFGTMVAPS 518

Query: 603 LKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFI 661
           L A   L     D TVA+ RF KPLD  LVREL + H FL+T EEG + GG GS      
Sbjct: 519 LAAAEEL-----DATVANMRFVKPLDAALVRELAETHDFLVTAEEGCVMGGAGS-----A 568

Query: 662 ALDGLLDSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAAT 705
            ++ L++SGV  RP++   LPD +I+H  P + L+L GL G  IA +
Sbjct: 569 CVEALMESGV-IRPVLQLGLPDQFIDHGDPAKLLSLCGLDGAGIAKS 614


>gi|237747172|ref|ZP_04577652.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oxalobacter formigenes
           HOxBLS]
 gi|229378523|gb|EEO28614.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oxalobacter formigenes
           HOxBLS]
          Length = 615

 Score =  461 bits (1185), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 262/628 (41%), Positives = 375/628 (59%), Gaps = 44/628 (7%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L+ + +P  L+ L   EL++LAVE+R  +   VSKT   L S+L  VEL +ALH+VF  
Sbjct: 3   LLNSINSPADLRKLPCSELQELAVELREYIIQSVSKTGGHLSSNLGTVELAIALHYVFDT 62

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+++WDVG Q+YAHKILTGRR+ + TLR+ +GISG+  R ES+YD F   H   S+SA
Sbjct: 63  PTDRLIWDVGHQSYAHKILTGRRNQMKTLRQLNGISGFPKRDESQYDAFGTAHSSTSISA 122

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAG-YLDSNMIVILNDSRHSLHPK 259
            LGMA+A  +K +    + VI +G    G A+EAM+N G Y D N++VILND+  S+ P 
Sbjct: 123 ALGMALAARLKNENYTSIAVIGDGAITGGMAFEAMNNVGMYNDINLLVILNDNDMSISP- 181

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRG-MHEWAAKVDEYARGMIG 318
                  ++ AL+S  +R+ S K +      AK + K + RG M E A + +E+A+G+I 
Sbjct: 182 -------AVGALNSYFARLMSGKFY----ATAKNVGKTVLRGPMLEIAKRFEEHAKGLIA 230

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
           P  +TLFEE G  Y+GP+DGH++E LI  LQ +      GP  +H+VT++    +  +  
Sbjct: 231 P--ATLFEEFGFNYVGPIDGHDLESLIPTLQNLKE--RKGPQFLHIVTKKGHGYKLAEAD 286

Query: 379 EAIEKQQEGASDSNSLPFGNYSR-TYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLF 437
             +       S    +     S+ TY + F   L   A  ++ +V +   M     +  F
Sbjct: 287 PVLYHGLGKFSPEEGIKPAPVSKPTYAEIFGNWLCDTAAVNQKLVGITPAMREGSGMVRF 346

Query: 438 QEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVR 497
            + +P+R+FDVG+AEQHAVTF+AGLAC GLKP   I S FLQRAYDQ+++DV  Q L V 
Sbjct: 347 AKTYPDRFFDVGIAEQHAVTFAAGLACEGLKPVVAIYSTFLQRAYDQLIHDVALQNLDVT 406

Query: 498 FVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFR 557
           F +  AGLVG+DG T  G +D+ ++ C+PNM++MAPSDE+E   M+ T A + + P   R
Sbjct: 407 FALDRAGLVGADGATHAGNYDMAYLRCIPNMVIMAPSDENEARQML-TTAFLYNGPASVR 465

Query: 558 YPRGA----IVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
           YPRGA     V  +L      P+ IGKG+VL  G+++A+L +G MV + L A   L    
Sbjct: 466 YPRGAGVGKAVHQELS-----PLPIGKGEVLRRGQNIAILAFGTMVASSLSAGEEL---- 516

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVK 672
            + TV + RF KPLD  LV E+ Q H FL+TVEEG+I GG GS V   +A + + +    
Sbjct: 517 -NATVINMRFVKPLDKALVLEIAQTHPFLVTVEEGTISGGAGSAVMETLAAEKMAN---- 571

Query: 673 WRPIV---LPDNYIEHASPTQQLALAGL 697
             P++   LPD +I+H    Q LA+  L
Sbjct: 572 --PVLLLGLPDKFIDHGDVNQLLAMHNL 597


>gi|440680572|ref|YP_007155367.1| 1-deoxy-D-xylulose-5-phosphate synthase [Anabaena cylindrica PCC
           7122]
 gi|428677691|gb|AFZ56457.1| 1-deoxy-D-xylulose-5-phosphate synthase [Anabaena cylindrica PCC
           7122]
          Length = 636

 Score =  461 bits (1185), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 259/637 (40%), Positives = 381/637 (59%), Gaps = 27/637 (4%)

Query: 82  LDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAP 141
           L  + +P +L  L+I++L+Q+A +IR +    V+ T   L   L  VELT+AL+      
Sbjct: 3   LSEITHPNQLHGLSIRQLQQIAHQIRDKHLQTVAATGGHLGPGLGVVELTLALYQTLDLD 62

Query: 142 VDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAG 201
            DK++WDVG Q Y HK+LTGR S  HTLR+KDG++GY  R E+++D F AGH   S+SA 
Sbjct: 63  RDKVIWDVGHQAYPHKLLTGRYSDFHTLRQKDGVAGYLKRCENKFDHFGAGHASTSISAA 122

Query: 202 LGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPKI 260
           LGMA+ARD+KG++   V VI +G    G A EA+++AG+L  +N++V+LND+  S+ P  
Sbjct: 123 LGMALARDLKGEKFKAVAVIGDGALTGGMALEAINHAGHLPKTNLLVVLNDNEMSISP-- 180

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRI---GRGMHEWAAKVDEYARGMI 317
                 ++ A+   L++++ S   + +++  +   K I   G  +     ++ E  + + 
Sbjct: 181 ------NVGAIPRYLNKMRLSPPVQFIKDNFEEQVKHIPFVGESLSPELDRIKEGMKRLA 234

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQK 377
            P+   +FEELG  Y+GPVDGHN+E+LI+  Q+   +   GPVLVHVVT + +  E  +K
Sbjct: 235 VPKVGAVFEELGFTYMGPVDGHNLEELIATFQQAHQM--TGPVLVHVVTTKGKGYEIAEK 292

Query: 378 SEAIEKQQE--GASDSNSLPFGNYSR--TYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
            +     Q     S   ++P  N  +   Y   F   LV  AE++  IV + A M     
Sbjct: 293 DQVGYHAQNPFNVSTGKAIP-SNKPKPPAYAKVFSHTLVKLAEQNPKIVGITAAMATGTG 351

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L   Q K P +Y DVG+AEQHA+T +AGLAC G++P   I S FLQRAYDQ+++DV  Q 
Sbjct: 352 LDKLQTKLPNQYIDVGIAEQHAITLAAGLACEGMRPVAAIYSTFLQRAYDQIIHDVCIQN 411

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPV F +  AG+VG+DGPT  G +DI ++ C+PNM+VMAP DE EL  MV T  +    P
Sbjct: 412 LPVFFCLDRAGIVGADGPTHQGMYDIAYLRCIPNMVVMAPKDEAELQRMVVTGINHTSGP 471

Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
           +  R+PRG      L      P+EIGKG++L +G DV ++GYG MV   ++A  +LS+ G
Sbjct: 472 ISMRFPRGNGHGVPLMEEGWEPLEIGKGEILRQGDDVLIVGYGTMVYPGMQAAEILSEHG 531

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSG-- 670
           I+ TV +ARF KPLD +L+  L +    ++T+EEG + GGFGS V+     + L+D+   
Sbjct: 532 IEATVINARFVKPLDTELILPLAKQIGRVVTLEEGCLMGGFGSAVA-----EALMDADVL 586

Query: 671 VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATAL 707
           V  + I +PD  ++HA+P Q  A  GL+   IA T L
Sbjct: 587 VPVKRIGVPDILVDHATPDQSFAALGLSSRQIAETVL 623


>gi|421866285|ref|ZP_16297957.1| 1-deoxy-D-xylulose 5-phosphate synthase [Burkholderia cenocepacia
           H111]
 gi|358073868|emb|CCE48835.1| 1-deoxy-D-xylulose 5-phosphate synthase [Burkholderia cenocepacia
           H111]
          Length = 634

 Score =  461 bits (1185), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 275/641 (42%), Positives = 381/641 (59%), Gaps = 46/641 (7%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L  +++P  L+ L  ++L+ LA E+R+ +   VSKT   L S+L  VELT+ALH+VF+ 
Sbjct: 4   LLKTIDDPADLRRLDRRQLQPLADELRAFVLDSVSKTGGHLSSNLGTVELTIALHYVFNT 63

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+I+WDVG QTY HKILTGRR  +H+LR+ DGISG+  RSESEYD F   H   S+SA
Sbjct: 64  PNDRIVWDVGHQTYPHKILTGRRDQMHSLRQYDGISGFPRRSESEYDTFGTAHSSTSISA 123

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPK 259
            LGMA+   + G     + VI +G   AG A+EAM+NAG   D+ ++VILND+  S+ P 
Sbjct: 124 ALGMAIGSQLNGDDRFSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDNDMSISP- 182

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                   + AL+  L+R+ S + +   R   + +   +   + E A K++E+A+GM+ P
Sbjct: 183 -------PVGALNRHLARLMSGRFYAAARAGVERVLS-VAPPVLELARKLEEHAKGMVVP 234

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             +TLFEE G  YIGP+DGH+++ LI  LQ +  L   GP  +HVVT   ++ +  + +E
Sbjct: 235 --ATLFEEFGFNYIGPIDGHDLDSLIPTLQNIREL--RGPQFLHVVT---KKGQGYKLAE 287

Query: 380 AIEKQQEGASDSNSLPFGNYS-----RTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
           A      G    N       S     +TY   F E L  EAE+D  +V +   M     +
Sbjct: 288 ADPVLYHGPGKFNPAEGIKPSTTPAKKTYTQVFGEWLCDEAERDTRVVGITPAMREGSGM 347

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F+++F +RY+DVG+AEQHAVTF+ GLA  GLKP   I S FLQRAYDQ+++DV  Q L
Sbjct: 348 VEFEKRFKDRYYDVGIAEQHAVTFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNL 407

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PV F I  AGLVG+DG T  GA+D+ FM C+PNM +MA SDE+E   M+ T A     P 
Sbjct: 408 PVVFAIDRAGLVGADGATHAGAYDLAFMRCIPNMTIMAASDENECRQMLHT-ALQQPNPT 466

Query: 555 CFRYPRGAIVR-TDLPGYRGIPIEIGKGKVL-----VEGKDVALLGYGAMVQNCLKARAL 608
             RYPRGA      +  +  IP  +GKG+V       EGK VA+L +G MV   L A   
Sbjct: 467 AVRYPRGAGTGVATVKEFTEIP--LGKGEVRRRTSQPEGKRVAILAFGTMVAPSLAAAEE 524

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLL 667
           L     D TVA+ RF KP+D  LVREL + H +++TVEEG + GG GS       ++ L+
Sbjct: 525 L-----DATVANMRFVKPVDAALVRELAETHDYVVTVEEGCVMGGAGS-----ACVEALM 574

Query: 668 DSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAAT 705
           +SGV  RP++   LPD +I+H  P + L+  GL G  IA +
Sbjct: 575 ESGV-IRPVLQLGLPDLFIDHGDPAKLLSQCGLDGAGIAKS 614


>gi|206562766|ref|YP_002233529.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia cenocepacia
           J2315]
 gi|444361874|ref|ZP_21162452.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia cenocepacia
           BC7]
 gi|444372696|ref|ZP_21172129.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia cenocepacia
           K56-2Valvano]
 gi|229813273|sp|B4EN29.1|DXS_BURCJ RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|198038806|emb|CAR54768.1| 1-deoxy-D-xylulose 5-phosphate synthase [Burkholderia cenocepacia
           J2315]
 gi|443592944|gb|ELT61708.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia cenocepacia
           K56-2Valvano]
 gi|443597989|gb|ELT66389.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia cenocepacia
           BC7]
          Length = 634

 Score =  460 bits (1184), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 275/641 (42%), Positives = 381/641 (59%), Gaps = 46/641 (7%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L  +++P  L+ L  ++L+ LA E+R+ +   VSKT   L S+L  VELT+ALH+VF+ 
Sbjct: 4   LLKTIDDPADLRRLDRRQLQPLADELRAFVLDSVSKTGGHLSSNLGTVELTIALHYVFNT 63

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+I+WDVG QTY HKILTGRR  +H+LR+ DGISG+  RSESEYD F   H   S+SA
Sbjct: 64  PNDRIVWDVGHQTYPHKILTGRRDQMHSLRQYDGISGFPRRSESEYDTFGTAHSSTSISA 123

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPK 259
            LGMA+   + G     + VI +G   AG A+EAM+NAG   D+ ++VILND+  S+ P 
Sbjct: 124 ALGMAIGSQLNGDDRFSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDNDMSISP- 182

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                   + AL+  L+R+ S + +   R   + +   +   + E A K++E+A+GM+ P
Sbjct: 183 -------PVGALNRHLARLMSGRFYAAARAGVERVLS-VAPPVLELARKLEEHAKGMVVP 234

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             +TLFEE G  YIGP+DGH+++ LI  LQ +  L   GP  +HVVT   ++ +  + +E
Sbjct: 235 --ATLFEEFGFNYIGPIDGHDLDSLIPTLQNIREL--RGPQFLHVVT---KKGQGYKLAE 287

Query: 380 AIEKQQEGASDSNSLPFGNYS-----RTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
           A      G    N       S     +TY   F E L  EAE+D  +V +   M     +
Sbjct: 288 ADPVLYHGPGKFNPAEGIKPSTTPAKKTYTQVFGEWLCDEAERDTRVVGITPAMREGSGM 347

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F+++F +RY+DVG+AEQHAVTF+ GLA  GLKP   I S FLQRAYDQ+++DV  Q L
Sbjct: 348 VEFEKRFKDRYYDVGIAEQHAVTFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNL 407

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PV F I  AGLVG+DG T  GA+D+ FM C+PNM +MA SDE+E   M+ T A     P 
Sbjct: 408 PVVFAIDRAGLVGADGATHAGAYDLAFMRCIPNMTIMAASDENECRQMLHT-ALQQPNPT 466

Query: 555 CFRYPRGAIVR-TDLPGYRGIPIEIGKGKVL-----VEGKDVALLGYGAMVQNCLKARAL 608
             RYPRGA      +  +  IP  +GKG+V       EGK VA+L +G MV   L A   
Sbjct: 467 AVRYPRGAGTGVATVKEFTEIP--LGKGEVRRRTSQPEGKRVAILAFGTMVAPSLAAAEE 524

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLL 667
           L     D TVA+ RF KP+D  LVREL + H +++TVEEG + GG GS       ++ L+
Sbjct: 525 L-----DATVANMRFVKPVDAALVRELAETHDYVVTVEEGCVMGGAGS-----ACVEALM 574

Query: 668 DSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAAT 705
           +SGV  RP++   LPD +I+H  P + L+  GL G  IA +
Sbjct: 575 ESGV-IRPVLQLGLPDLFIDHGDPAKLLSQCGLDGAGIAKS 614


>gi|161521356|ref|YP_001584783.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia multivorans
           ATCC 17616]
 gi|160345406|gb|ABX18491.1| deoxyxylulose-5-phosphate synthase [Burkholderia multivorans ATCC
           17616]
          Length = 646

 Score =  460 bits (1184), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 279/647 (43%), Positives = 382/647 (59%), Gaps = 58/647 (8%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L  +++P  L+ L  ++L+ LA E+R+ +   VSKT   L S+L  VELT+ALH+VF+ 
Sbjct: 16  LLKTIDDPADLRRLDRRQLQPLADELRAFVLDSVSKTGGHLSSNLGTVELTIALHYVFNT 75

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+I+WDVG QTY HKILTGRR  + TLR+  GISG+  RSESEYD F   H   S+SA
Sbjct: 76  PNDRIVWDVGHQTYPHKILTGRRDEMPTLRQLGGISGFPRRSESEYDTFGTAHSSTSISA 135

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPK 259
            LGMA+   + G     + VI +G   AG A+EAM+NAG   D+ ++VILND+  S+ P 
Sbjct: 136 ALGMAIGSQLNGDDRFSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDNDMSISP- 194

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                   + AL+  L+R+ S + +   R   + +   +   + E A K++E+A+GM+ P
Sbjct: 195 -------PVGALNRHLARLMSGRFYAAARAGVERVLS-VAPPVLELARKLEEHAKGMVVP 246

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             +TLFEE G  YIGP+DGH+++ LI  LQ +  L   GP  +HVVT   ++ +  + +E
Sbjct: 247 --ATLFEEFGFNYIGPIDGHDLDSLIPTLQNIREL--RGPQFLHVVT---KKGQGYKLAE 299

Query: 380 AIEKQQEGASDSNSL----PFGNYS-RTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
           A      G    N      P    + +TY   F E L  EAE+D  +V +   M     +
Sbjct: 300 ADPVLYHGPGKFNPAEGIKPSATPAKKTYTQVFGEWLCDEAERDSRVVGITPAMREGSGM 359

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F+++F +RY+DVG+AEQHAVTF+ GLA  GLKP   I S FLQRAYDQ+++DV  Q L
Sbjct: 360 VEFEKRFKDRYYDVGIAEQHAVTFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNL 419

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PV F I  AGLVG+DG T  GA+D+ FM C+PNM +MA SDE+E   M+ T A     P 
Sbjct: 420 PVVFAIDRAGLVGADGATHAGAYDLAFMRCIPNMTIMAASDENECRQMLHT-ALQQPNPT 478

Query: 555 CFRYPRG-----AIVR--TDLPGYRGIPIEIGKGKVL-----VEGKDVALLGYGAMVQNC 602
             RYPRG     A V+  T+LP        IGKG+V       EGK +A+L +G MV   
Sbjct: 479 AVRYPRGAGTGVATVKEFTELP--------IGKGEVRRRTSQPEGKRIAILAFGTMVAPS 530

Query: 603 LKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFI 661
           L A   L     D TVA+ RF KPLD  LVREL + H FL+T EEG + GG GS      
Sbjct: 531 LAAAEEL-----DATVANMRFVKPLDAALVRELAETHDFLVTAEEGCVMGGAGS-----A 580

Query: 662 ALDGLLDSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAAT 705
            ++ L++SGV  RP++   LPD +I+H  P + L+L GL G  IA +
Sbjct: 581 CVEALMESGV-IRPVLQLGLPDQFIDHGDPAKLLSLCGLDGVGIAKS 626


>gi|189352477|ref|YP_001948104.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia multivorans
           ATCC 17616]
 gi|189336499|dbj|BAG45568.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia multivorans
           ATCC 17616]
          Length = 634

 Score =  460 bits (1184), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 279/647 (43%), Positives = 382/647 (59%), Gaps = 58/647 (8%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L  +++P  L+ L  ++L+ LA E+R+ +   VSKT   L S+L  VELT+ALH+VF+ 
Sbjct: 4   LLKTIDDPADLRRLDRRQLQPLADELRAFVLDSVSKTGGHLSSNLGTVELTIALHYVFNT 63

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+I+WDVG QTY HKILTGRR  + TLR+  GISG+  RSESEYD F   H   S+SA
Sbjct: 64  PNDRIVWDVGHQTYPHKILTGRRDEMPTLRQLGGISGFPRRSESEYDTFGTAHSSTSISA 123

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPK 259
            LGMA+   + G     + VI +G   AG A+EAM+NAG   D+ ++VILND+  S+ P 
Sbjct: 124 ALGMAIGSQLNGDDRFSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDNDMSISP- 182

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                   + AL+  L+R+ S + +   R   + +   +   + E A K++E+A+GM+ P
Sbjct: 183 -------PVGALNRHLARLMSGRFYAAARAGVERVLS-VAPPVLELARKLEEHAKGMVVP 234

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             +TLFEE G  YIGP+DGH+++ LI  LQ +  L   GP  +HVVT   ++ +  + +E
Sbjct: 235 --ATLFEEFGFNYIGPIDGHDLDSLIPTLQNIREL--RGPQFLHVVT---KKGQGYKLAE 287

Query: 380 AIEKQQEGASDSNSL----PFGNYS-RTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
           A      G    N      P    + +TY   F E L  EAE+D  +V +   M     +
Sbjct: 288 ADPVLYHGPGKFNPAEGIKPSATPAKKTYTQVFGEWLCDEAERDSRVVGITPAMREGSGM 347

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F+++F +RY+DVG+AEQHAVTF+ GLA  GLKP   I S FLQRAYDQ+++DV  Q L
Sbjct: 348 VEFEKRFKDRYYDVGIAEQHAVTFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNL 407

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PV F I  AGLVG+DG T  GA+D+ FM C+PNM +MA SDE+E   M+ T A     P 
Sbjct: 408 PVVFAIDRAGLVGADGATHAGAYDLAFMRCIPNMTIMAASDENECRQMLHT-ALQQPNPT 466

Query: 555 CFRYPRG-----AIVR--TDLPGYRGIPIEIGKGKVL-----VEGKDVALLGYGAMVQNC 602
             RYPRG     A V+  T+LP        IGKG+V       EGK +A+L +G MV   
Sbjct: 467 AVRYPRGAGTGVATVKEFTELP--------IGKGEVRRRTSQPEGKRIAILAFGTMVAPS 518

Query: 603 LKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFI 661
           L A   L     D TVA+ RF KPLD  LVREL + H FL+T EEG + GG GS      
Sbjct: 519 LAAAEEL-----DATVANMRFVKPLDAALVRELAETHDFLVTAEEGCVMGGAGS-----A 568

Query: 662 ALDGLLDSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAAT 705
            ++ L++SGV  RP++   LPD +I+H  P + L+L GL G  IA +
Sbjct: 569 CVEALMESGV-IRPVLQLGLPDQFIDHGDPAKLLSLCGLDGVGIAKS 614


>gi|430809187|ref|ZP_19436302.1| 1-deoxy-D-xylulose-5-phosphate synthase [Cupriavidus sp. HMR-1]
 gi|429498331|gb|EKZ96841.1| 1-deoxy-D-xylulose-5-phosphate synthase [Cupriavidus sp. HMR-1]
          Length = 637

 Score =  460 bits (1183), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 267/636 (41%), Positives = 382/636 (60%), Gaps = 48/636 (7%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L+ +++P  L+ L  ++L  LA E+R+ +   VS+T   L S+L  VELT+ALH+VF  
Sbjct: 5   LLNKIDDPADLRKLDRRQLDTLAEELRAYVLESVSQTGGHLSSNLGTVELTIALHYVFDT 64

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+++WDVG Q+Y HKILTGRR  + TLR+  GISG+  R+ESEYD F   H   S+SA
Sbjct: 65  PNDRVVWDVGHQSYPHKILTGRRDRMSTLRQYGGISGFPRRAESEYDTFGTAHSSTSISA 124

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAG-YLDSNMIVILNDSRHSLHPK 259
            LGMA+    +G++   + VI +G   AG A+EAM+NAG Y D  M+V+LND+  S+ P 
Sbjct: 125 ALGMALGARTRGEKRVGIAVIGDGAMTAGMAFEAMNNAGVYKDLPMLVVLNDNDMSISP- 183

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTK--RIGRGMHEWAAKVDEYARGMI 317
                   +  L+  L+R+ S + +   +   KG+ K   +   + E+A +++E+A+GM+
Sbjct: 184 -------PVGMLNKHLARLMSGQFYAATK---KGIEKVLSVAPPVLEFAKRLEEHAKGMV 233

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEV--ASLGSMGPVLVHVVTEENRRAEDT 375
            P  +TLFEE G  Y+GP+DGH++E L+  LQ +   +L   GP  +HVVT   ++ +  
Sbjct: 234 VP--ATLFEEFGFDYVGPIDGHDLESLVPTLQNIRQRALEGHGPQFLHVVT---KKGQGY 288

Query: 376 QKSEAIEKQQEGASDSNSL----PFGNYSR-TYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
           + +EA      G    N      P    SR TY   F E L   A  DK ++ V   M  
Sbjct: 289 KLAEADPILYHGPGKFNPAEGIRPSAKPSRKTYTQVFGEWLCDMAAADKRLIGVTPAMRE 348

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              +  F+++FP+RY+DVG+AEQHAVTF+ GLAC GLKP   I S FLQR YDQ+++DV 
Sbjct: 349 GSGMVEFEKRFPDRYYDVGIAEQHAVTFAGGLACEGLKPVVAIYSTFLQRGYDQLIHDVA 408

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q LPV F +  AGLVG+DG T  G +DI F+ C+PNM+VMAP+DE+E   ++ T A   
Sbjct: 409 LQNLPVVFALDRAGLVGADGATHAGVYDIPFLRCIPNMMVMAPADENECRQLL-TTAFQQ 467

Query: 551 DRPVCFRYPRGAIVRTDL-PGYRGIPIEIGKGKVLVE-----GKDVALLGYGAMVQNCLK 604
           D P   RYPRGA V     P    +P  +GKG++  E     G+ VA++ +G+MV   L 
Sbjct: 468 DCPTAVRYPRGAGVGVATQPELTALP--VGKGEIRREGHARAGQRVAIMAFGSMVHPALT 525

Query: 605 ARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEG-SIGGFGSHVSHFIAL 663
           A   L     D TVA+ RF KPLD++LV++L  NH FL+TVEEG ++GG GS V     L
Sbjct: 526 AAEQL-----DATVANMRFVKPLDVELVKQLAANHDFLVTVEEGATMGGAGSAV-----L 575

Query: 664 DGLLDSGVKWRPIV--LPDNYIEHASPTQQLALAGL 697
           + L ++ +    +V  LPD +I+H  P   L+L GL
Sbjct: 576 EALAEADIALPTLVLGLPDKFIDHGDPAHLLSLCGL 611


>gi|167031588|ref|YP_001666819.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas putida GB-1]
 gi|189027782|sp|B0KL79.1|DXS_PSEPG RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|166858076|gb|ABY96483.1| deoxyxylulose-5-phosphate synthase [Pseudomonas putida GB-1]
          Length = 631

 Score =  460 bits (1183), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 268/639 (41%), Positives = 382/639 (59%), Gaps = 44/639 (6%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD  + P  L+ L   +L+ LA E+R EL   V +T     + L  +ELT+ALH+VF
Sbjct: 15  TPLLDRADTPAGLRRLAEADLETLADELRQELLYTVGQTGGHFGAGLGVIELTIALHYVF 74

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR+ + +LR+KDGI+ +  RSESEYD F  GH   S+
Sbjct: 75  DTPDDRLVWDVGHQAYPHKILTGRRNRMLSLRQKDGIAAFPRRSESEYDTFGVGHSSTSI 134

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LGMA+A  ++      + VI +G   AG A+EA+++A  ++++M+VILND+  S+  
Sbjct: 135 SAALGMAIAARLQNSARKSIAVIGDGALTAGMAFEALNHAQEVNADMLVILNDNDMSI-- 192

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                   ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+GM+ 
Sbjct: 193 ------SRNVGGLSNYLAKILSSRTYASMREGSKKVLSRL-PGAWEIARRTEEYAKGMLV 245

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---RAE-D 374
           P   TLFEELG  YIGP+DGH++  +I+ L+ +  L   GP  +HVVT++ +    AE D
Sbjct: 246 P--GTLFEELGWNYIGPIDGHDLPTMIATLRNMRDL--KGPQFLHVVTKKGKGFAPAEVD 301

Query: 375 TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
                AI K +   +D  + P       Y   F + L   A  D  +V +   M+    L
Sbjct: 302 PIGYHAITKLEP--ADKPAAPKKVSGPKYSAVFGQWLCDMAAADNRLVGITPAMKEGSDL 359

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F E++P+RYFDV +AEQHAVT +AG+AC G KP   I S FLQRAYDQ+++DV  Q L
Sbjct: 360 VDFSERYPQRYFDVAIAEQHAVTLAAGMACEGSKPVVAIYSTFLQRAYDQLIHDVAVQNL 419

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
            V F I  AGLVG DGPT  G++D++++ C+P M+VM PSDE+EL  M++T   + + P 
Sbjct: 420 DVLFAIDRAGLVGEDGPTHAGSYDLSYLRCIPGMLVMTPSDENELRKMLST-GHLYNGPA 478

Query: 555 CFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLS 610
             RYPRG    A +  DL      P+EIGKG V  +G+ +ALL +G  +     A A+  
Sbjct: 479 AVRYPRGTGPNAPISGDLQ-----PLEIGKGVVRRQGEKIALLVFGVQL-----AEAMQV 528

Query: 611 KLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDS 669
              I+ TV D RF KPLD  LV EL  +H  L+T+EE +I GG G+ V  F+A   +L  
Sbjct: 529 AEQINATVVDMRFVKPLDEALVLELAGSHELLVTIEENAIMGGAGAAVGEFLASQAVL-- 586

Query: 670 GVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAAT 705
               +P++   LPD Y+EHA P Q LA  GL    I A+
Sbjct: 587 ----KPLLHLGLPDIYVEHAKPAQMLAECGLDAAGIEAS 621


>gi|107026830|ref|YP_624341.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia cenocepacia
           AU 1054]
 gi|116691976|ref|YP_837509.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia cenocepacia
           HI2424]
 gi|123461833|sp|A0AYZ0.1|DXS_BURCH RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|105896204|gb|ABF79368.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia cenocepacia
           AU 1054]
 gi|116649976|gb|ABK10616.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia cenocepacia
           HI2424]
          Length = 646

 Score =  460 bits (1183), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 275/641 (42%), Positives = 380/641 (59%), Gaps = 46/641 (7%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L  +++P  L+ L  ++L+ LA E+R+ +   VSKT   L S+L  VELT+ALH+VF+ 
Sbjct: 16  LLKTIDDPADLRRLDRRQLQPLADELRAFVLDSVSKTGGHLSSNLGTVELTIALHYVFNT 75

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+I+WDVG QTY HKILTGRR  +H+LR+ DGISG+  RSESEYD F   H   S+SA
Sbjct: 76  PNDRIVWDVGHQTYPHKILTGRRDQMHSLRQYDGISGFPRRSESEYDTFGTAHSSTSISA 135

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPK 259
            LGMA+   + G     + VI +G   AG A+EAM+NAG   D+ ++VILND+  S+ P 
Sbjct: 136 ALGMAIGSQLNGDDRFSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDNDMSISP- 194

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                   + AL+  L+R+ S + +   R   + +   +   + E A K++E+A+GM+ P
Sbjct: 195 -------PVGALNRHLARLMSGRFYAAARAGVERVLS-VAPPVLELARKLEEHAKGMVVP 246

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             +TLFEE G  YIGP+DGH+++ LI  LQ +  L   GP  +HVVT   ++ +  + +E
Sbjct: 247 --ATLFEEFGFNYIGPIDGHDLDSLIPTLQNIREL--RGPQFLHVVT---KKGQGYKLAE 299

Query: 380 AIEKQQEGASDSNSLPFGNYS-----RTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
           A      G    N       S     +TY   F E L  EAE+D  +V +   M     +
Sbjct: 300 ADPVLYHGPGKFNPAEGIKPSTTPAKKTYTQVFGEWLCDEAERDTRVVGITPAMREGSGM 359

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F+++F +RY+DVG+AEQHAVTF+ GLA  GLKP   I S FLQRAYDQ+++DV  Q L
Sbjct: 360 VEFEKRFKDRYYDVGIAEQHAVTFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNL 419

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PV F I  AGLVG+DG T  GA+D+ FM C+PNM +MA SDE+E   M+ T A     P 
Sbjct: 420 PVVFAIDRAGLVGADGATHAGAYDLAFMRCIPNMTIMAASDENECRQMLHT-ALQQPNPT 478

Query: 555 CFRYPRGAIVR-TDLPGYRGIPIEIGKGKVL-----VEGKDVALLGYGAMVQNCLKARAL 608
             RYPRGA      +  +  IP  +GKG+V       EGK VA+L +G MV   L A   
Sbjct: 479 AVRYPRGAGTGVATVKEFTEIP--LGKGEVRRRTSQPEGKRVAILAFGTMVAPSLAAAEE 536

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLL 667
           L     D TVA+ RF KP+D  LVREL + H +L+TVEEG + GG GS       ++ L+
Sbjct: 537 L-----DATVANMRFVKPVDAALVRELAETHDYLVTVEEGCVMGGAGS-----ACVEALM 586

Query: 668 DSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAAT 705
           +SGV  RP++   LPD +++H    + LA  GL G  IA +
Sbjct: 587 ESGV-IRPVLQLGLPDQFVDHGDHAKLLAQCGLDGAGIAKS 626


>gi|254253602|ref|ZP_04946919.1| Deoxyxylulose-5-phosphate synthase [Burkholderia dolosa AUO158]
 gi|124898247|gb|EAY70090.1| Deoxyxylulose-5-phosphate synthase [Burkholderia dolosa AUO158]
          Length = 646

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 276/641 (43%), Positives = 378/641 (58%), Gaps = 46/641 (7%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L  +++P  L+ L  ++L+ LA E+R+ +   VSKT   L S+L  VELT+ALH+VF+ 
Sbjct: 16  LLKTIDDPADLRRLDRRQLQPLADELRAFVLDSVSKTGGHLSSNLGTVELTIALHYVFNT 75

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+I+WDVG QTY HKILTGRR  +HTLR+  GISG+  RSESEYD F   H   S+SA
Sbjct: 76  PNDRIVWDVGHQTYPHKILTGRRDQMHTLRQFGGISGFPRRSESEYDTFGTAHSSTSISA 135

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPK 259
            LGMA+   + G     + VI +G   AG A+EAM+NAG   D+ ++VILND+  S+ P 
Sbjct: 136 ALGMAIGSQLNGDDRFSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDNDMSISP- 194

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                   + AL+  L+R+ S + +   R   + +   +   + E A K++E+A+GM+ P
Sbjct: 195 -------PVGALNRHLARLMSGRFYAAARAGVERVLS-VAPPVLELARKLEEHAKGMVVP 246

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             +TLFEE G  YIGP+DGH+++ LI  LQ +  L   GP  +HVVT   ++ +  + +E
Sbjct: 247 --ATLFEEFGFNYIGPIDGHDLDSLIPTLQNIREL--RGPQFLHVVT---KKGQGYKLAE 299

Query: 380 AIEKQQEGASDSNSL----PFGNYS-RTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
           A      G    N      P    + +TY   F E L  EAE+D  +V +   M     +
Sbjct: 300 ADPVLYHGPGKFNPAEGIKPSATPAKKTYTQVFGEWLCDEAERDSRVVGITPAMREGSGM 359

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F+++F +RY+DVG+AEQHAVTF+ GLA  GLKP   I S FLQRAYDQ+++DV  Q L
Sbjct: 360 VEFEKRFKDRYYDVGIAEQHAVTFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNL 419

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PV F I  AGLVG+DG T  GA+D+ FM C+PNM +MA SDE+E   M+ T A     P 
Sbjct: 420 PVVFAIDRAGLVGADGATHAGAYDLAFMRCIPNMTIMAASDENECRQMLHT-ALQQPNPT 478

Query: 555 CFRYPRGAIVR-TDLPGYRGIPIEIGKGKVL-----VEGKDVALLGYGAMVQNCLKARAL 608
             RYPRGA      +  +  IP  +GKG+V       EGK VA+L +G MV   L A   
Sbjct: 479 AVRYPRGAGTGVATVKEFTEIP--LGKGEVRRRTSQPEGKRVAILAFGTMVAPSLAAAEE 536

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLL 667
           L     D TVA+ RF KPLD  LVREL Q H +L+T EEG + GG GS       ++ L+
Sbjct: 537 L-----DATVANMRFVKPLDAALVRELAQTHDYLVTAEEGCVMGGAGS-----ACVEALM 586

Query: 668 DSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAAT 705
           +SGV  RP++   LPD +I+H  P   L+  GL    IA +
Sbjct: 587 ESGV-IRPVLQLGLPDQFIDHGDPATLLSQCGLDAAGIAKS 626


>gi|170736030|ref|YP_001777290.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia cenocepacia
           MC0-3]
 gi|119368197|sp|Q1BLY7.2|DXS_BURCA RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|229813272|sp|B1K3S9.1|DXS_BURCC RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|169818218|gb|ACA92800.1| deoxyxylulose-5-phosphate synthase [Burkholderia cenocepacia MC0-3]
          Length = 634

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 275/641 (42%), Positives = 380/641 (59%), Gaps = 46/641 (7%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L  +++P  L+ L  ++L+ LA E+R+ +   VSKT   L S+L  VELT+ALH+VF+ 
Sbjct: 4   LLKTIDDPADLRRLDRRQLQPLADELRAFVLDSVSKTGGHLSSNLGTVELTIALHYVFNT 63

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+I+WDVG QTY HKILTGRR  +H+LR+ DGISG+  RSESEYD F   H   S+SA
Sbjct: 64  PNDRIVWDVGHQTYPHKILTGRRDQMHSLRQYDGISGFPRRSESEYDTFGTAHSSTSISA 123

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPK 259
            LGMA+   + G     + VI +G   AG A+EAM+NAG   D+ ++VILND+  S+ P 
Sbjct: 124 ALGMAIGSQLNGDDRFSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDNDMSISP- 182

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                   + AL+  L+R+ S + +   R   + +   +   + E A K++E+A+GM+ P
Sbjct: 183 -------PVGALNRHLARLMSGRFYAAARAGVERVLS-VAPPVLELARKLEEHAKGMVVP 234

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             +TLFEE G  YIGP+DGH+++ LI  LQ +  L   GP  +HVVT   ++ +  + +E
Sbjct: 235 --ATLFEEFGFNYIGPIDGHDLDSLIPTLQNIREL--RGPQFLHVVT---KKGQGYKLAE 287

Query: 380 AIEKQQEGASDSNSLPFGNYS-----RTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
           A      G    N       S     +TY   F E L  EAE+D  +V +   M     +
Sbjct: 288 ADPVLYHGPGKFNPAEGIKPSTTPAKKTYTQVFGEWLCDEAERDTRVVGITPAMREGSGM 347

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F+++F +RY+DVG+AEQHAVTF+ GLA  GLKP   I S FLQRAYDQ+++DV  Q L
Sbjct: 348 VEFEKRFKDRYYDVGIAEQHAVTFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNL 407

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PV F I  AGLVG+DG T  GA+D+ FM C+PNM +MA SDE+E   M+ T A     P 
Sbjct: 408 PVVFAIDRAGLVGADGATHAGAYDLAFMRCIPNMTIMAASDENECRQMLHT-ALQQPNPT 466

Query: 555 CFRYPRGAIVR-TDLPGYRGIPIEIGKGKVL-----VEGKDVALLGYGAMVQNCLKARAL 608
             RYPRGA      +  +  IP  +GKG+V       EGK VA+L +G MV   L A   
Sbjct: 467 AVRYPRGAGTGVATVKEFTEIP--LGKGEVRRRTSQPEGKRVAILAFGTMVAPSLAAAEE 524

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLL 667
           L     D TVA+ RF KP+D  LVREL + H +L+TVEEG + GG GS       ++ L+
Sbjct: 525 L-----DATVANMRFVKPVDAALVRELAETHDYLVTVEEGCVMGGAGS-----ACVEALM 574

Query: 668 DSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAAT 705
           +SGV  RP++   LPD +++H    + LA  GL G  IA +
Sbjct: 575 ESGV-IRPVLQLGLPDQFVDHGDHAKLLAQCGLDGAGIAKS 614


>gi|269926957|ref|YP_003323580.1| deoxyxylulose-5-phosphate synthase [Thermobaculum terrenum ATCC
           BAA-798]
 gi|269790617|gb|ACZ42758.1| deoxyxylulose-5-phosphate synthase [Thermobaculum terrenum ATCC
           BAA-798]
          Length = 640

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 268/654 (40%), Positives = 389/654 (59%), Gaps = 48/654 (7%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSEL-SSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           ILD +E+P +LK+LT  +LKQLA E+R  L  ++   T     S+L  VE+ +ALH VF 
Sbjct: 4   ILDTIESPDQLKNLTHDQLKQLAQEMRERLVETVYGVTGGHFSSNLGTVEIAIALHTVFD 63

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
           +P DKI+WDVG Q Y HK+LTGR  L+HT+R+  G++ +  R ES +D F AGH   S+S
Sbjct: 64  SPRDKIIWDVGHQAYPHKMLTGRNKLMHTIRQYGGLAPFLMREESPHDQFGAGHASTSIS 123

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           A LGMAVARD++G+   +V VI +G    G A EA++N G+L + MIV+LND+  S++P 
Sbjct: 124 AALGMAVARDMQGEDYHVVAVIGDGALTGGMALEALNNLGHLGTKMIVLLNDNEMSIYPN 183

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRI--GRGMHEWAAKVDEYARGMI 317
           +   P+         L+R+++S+++ + +     + +R+  G  + E   +  +  + ++
Sbjct: 184 VGVVPRL--------LTRLRTSRTYHRAKGDVVSILQRMPAGDALVELGKRFKDSVKELV 235

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAE---- 373
            P  + ++EELGL Y+GP+DGHN+ DL   L     L    PVL+H +T + +  E    
Sbjct: 236 IP--NMMWEELGLTYLGPIDGHNLADLQETLTLAKQLDR--PVLIHAITIKGKGFEPAEA 291

Query: 374 --DTQKSEAIEKQQEGASDSN-SLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
              T K  ++  +  G SD+  S P       Y D F + L+  AE+D+ IV + A M  
Sbjct: 292 ESKTHKWHSVTPKSPGKSDNKPSAP------RYQDVFAQTLIRLAEEDERIVGITAAMPD 345

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
             SL  F ++FP+R FDVG+AEQHAVTF+AGLA  G++P   I S FLQRAYDQVV+DV 
Sbjct: 346 GTSLDQFGKRFPDRMFDVGIAEQHAVTFAAGLAAAGMRPVAAIYSTFLQRAYDQVVHDVA 405

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q LPV F +  AG+ G+DG T  GA DI+++ C+PNM +MAP DE+EL  M+ T  S++
Sbjct: 406 MQNLPVVFAMDRAGIAGNDGRTHHGALDISYLRCVPNMTLMAPKDENELQHMLKTALSLE 465

Query: 551 DRPVCFRYPRGAIVRTDLPGYRGIP-------IEIGKGKVLVEGKDVALLGYGAMVQNCL 603
             P   RYPRG        GY G+P       I +G  ++L EG+D+ +L  G  V   L
Sbjct: 466 G-PAAIRYPRGN-------GY-GVPLSETFHVIPVGTWELLQEGEDLLILATGYSVYQAL 516

Query: 604 KARALLSKL-GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEG-SIGGFGSHVSHFI 661
           +A  +LSK  GI  TV + RF KPLD +L+++L   H +LITVEE   +GGFGS V   +
Sbjct: 517 EAAKILSKQDGIFATVVNCRFIKPLDEELLQKLVAKHDYLITVEENVRMGGFGSAVLESL 576

Query: 662 ALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTRE 715
           A   ++ S  ++  + +PD Y+EH S      + GL    IA TA  LL +T +
Sbjct: 577 ADHSMVPS--RFVRLGMPDRYVEHGSQEILRKILGLDAEGIAQTARELLYKTTD 628


>gi|269837890|ref|YP_003320118.1| deoxyxylulose-5-phosphate synthase [Sphaerobacter thermophilus DSM
           20745]
 gi|269787153|gb|ACZ39296.1| deoxyxylulose-5-phosphate synthase [Sphaerobacter thermophilus DSM
           20745]
          Length = 629

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 264/614 (42%), Positives = 367/614 (59%), Gaps = 32/614 (5%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSE-LSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           +L+ V++P  LK+L+++EL+QLA EIR   L  IV KT     S+L +VEL +ALH+VF+
Sbjct: 2   LLERVDSPEDLKALSLRELEQLAAEIRQTILDIIVGKTGGHFASNLGSVELAIALHYVFN 61

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
           +P DKI+WDVG Q Y HK++TGRR   HT+R+  G+SG+  R ES +D F AGH   S+S
Sbjct: 62  SPQDKIVWDVGHQAYPHKLITGRRDRFHTIRQPGGLSGFLQREESPHDHFGAGHASTSIS 121

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           A LGMAVA  +KG+R   V VI +G    G AYEA++NAG L   +IV+LND+  S+ P 
Sbjct: 122 AALGMAVAGRLKGERFHTVAVIGDGALTGGMAYEALNNAGSLQVPLIVVLNDNEMSIAP- 180

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                  ++ AL   LSRI++ + + Q +   + +  R+ +G  +W  ++ +  +  +  
Sbjct: 181 -------NVGALPKYLSRIRTDERYTQAKIEVERLLHRMPQG--DWLLELGKRMKDGLKE 231

Query: 320 --QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAE---- 373
               + ++EELG  Y+GPVDGHN+ DLI  LQ+V  +   GPV VH VT + +  E    
Sbjct: 232 VVYHTMIWEELGFTYVGPVDGHNLRDLIETLQQVREID--GPVFVHAVTVKGKGYEPAEN 289

Query: 374 DTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
           D  K  A   +  GA  S           Y D F E L   A +D+ IV + A M     
Sbjct: 290 DPFKHHAASIKIPGAPPSPP--------KYQDVFGETLTALAREDERIVAITAAMPDGTG 341

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L  F ++ P+R+FDVG+AEQHAVTF+AGLA  GL+P   I S FLQRA+DQVV+DV  Q+
Sbjct: 342 LLPFAKEHPKRFFDVGIAEQHAVTFAAGLATQGLRPVAAIYSTFLQRAFDQVVHDVCIQK 401

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPV   +  AG  G DG T  G FDI ++ CLPNM++MAP DE+EL  M+ T    +D P
Sbjct: 402 LPVVLAMDRAGFAGEDGRTHHGLFDIAYLRCLPNMVLMAPKDENELRHMLKTAILYEDGP 461

Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
           +  RYPRGA V   L G    P+ IG+G+VL EG D+ ++  G MV    +A  +L++ G
Sbjct: 462 IALRYPRGAGVGVPLTG-EPHPLPIGRGEVLREGDDITIVALGTMVLPAERAADILAEQG 520

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVK 672
           I  TV +ARF KPLD +L+    Q    L+TVEE  + GGFGS V   +A +GL    + 
Sbjct: 521 IHATVINARFVKPLDEELILSSAQRTGHLLTVEEAMLAGGFGSAVLELLAREGLR---LP 577

Query: 673 WRPIVLPDNYIEHA 686
              + +PD   +HA
Sbjct: 578 VTTLGVPDRIFDHA 591


>gi|434391679|ref|YP_007126626.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gloeocapsa sp. PCC 7428]
 gi|428263520|gb|AFZ29466.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gloeocapsa sp. PCC 7428]
          Length = 635

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 264/644 (40%), Positives = 375/644 (58%), Gaps = 41/644 (6%)

Query: 82  LDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAP 141
           L  + +P +L  L+I++L+Q+A +IR +    V+ +   L   L  VELT+AL+      
Sbjct: 3   LSEITHPNQLHGLSIRQLQQIARQIRDKHLQTVAASGGHLGPGLGVVELTLALYQTLDLD 62

Query: 142 VDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAG 201
            DK++WDVG Q Y HK++TGR S  HTLR+KDG++GY  R ES +D F AGH   S+SA 
Sbjct: 63  QDKVIWDVGHQAYPHKLITGRYSQFHTLRQKDGVAGYLKRCESPFDHFGAGHASTSISAA 122

Query: 202 LGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPKI 260
           LGMA+ARD+KG++  +  VI +G    G A EA+++AG+L  +N++V+LND+  S+ P  
Sbjct: 123 LGMALARDLKGEKFKVAAVIGDGALTGGMALEAINHAGHLPKTNLLVVLNDNEMSISP-- 180

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRI---GRGMHEWAAKVDEYARGMI 317
                 ++ A+S  L++++ S   + L +  +   K+I   G  +     +  E  + + 
Sbjct: 181 ------NVGAISRHLNKMRLSPPVQFLSDNLEEQVKQIPFVGDSLETELERFKEGMKRLA 234

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQK 377
            P+   +FEELG  Y+GPVDGHN+E+LI+  ++   +G  GPVLVHV T +        K
Sbjct: 235 VPKVGAVFEELGFTYMGPVDGHNLEELITTFKQAHKIG--GPVLVHVATVKG-------K 285

Query: 378 SEAIEKQQEGASDSNSLPFGNYSRT-----------YDDCFIEALVMEAEKDKDIVVVHA 426
             AI +Q +    + S PF   +             Y   F  ALV  AE +  IV + A
Sbjct: 286 GYAIAEQDQVGYHAQS-PFNLTTGKAIPSSKPKPPGYSKVFAHALVKLAENNPKIVGITA 344

Query: 427 GMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVV 486
            M     L   Q K P++Y DVG+AEQHAVT +AGLAC G++P   I S FLQR YDQ+V
Sbjct: 345 AMATGTGLDKLQAKLPQQYIDVGIAEQHAVTLAAGLACEGMRPVVAIYSTFLQRGYDQIV 404

Query: 487 NDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATV 546
           +DV  Q LPV F +  AG+VG+DGPT  G +DI ++ CLPNM++MAP DE EL  MV T 
Sbjct: 405 HDVCIQNLPVFFCMDRAGIVGADGPTHQGMYDIAYLRCLPNMVLMAPKDEAELQRMVVTG 464

Query: 547 ASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
            +  + P+  RYPRG      L      P+EIGKG+ L  G DV LLG+G+MV   ++  
Sbjct: 465 VNYTNGPIAMRYPRGNGYGVPLMEEGWEPVEIGKGETLRHGDDVLLLGFGSMVYPAMQVA 524

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG 665
            +LS+ GI  TV +ARF KPLD +L+  L Q    ++T+EEG + GGFGS V+     + 
Sbjct: 525 EILSEHGIQATVVNARFAKPLDTELILPLAQRIGRVVTLEEGCLMGGFGSAVA-----EA 579

Query: 666 LLDSG--VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATAL 707
           LLD+   V  +   +PD  ++HASP Q  A  GLT   IA   L
Sbjct: 580 LLDADVVVPVKRFGIPDTLVDHASPDQSKAELGLTSPQIAQEVL 623


>gi|71908674|ref|YP_286261.1| 1-deoxy-D-xylulose-5-phosphate synthase [Dechloromonas aromatica
           RCB]
 gi|118595510|sp|Q47BJ0.1|DXS_DECAR RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|71848295|gb|AAZ47791.1| 1-deoxy-D-xylulose-5-phosphate synthase [Dechloromonas aromatica
           RCB]
          Length = 618

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 263/620 (42%), Positives = 369/620 (59%), Gaps = 26/620 (4%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L+ + +P  L+ L  K+L QLA E+R+ L   VSKT   L S+L  VELT+ALH VF+ 
Sbjct: 6   LLETINSPADLRRLDRKQLPQLASELRAFLIDSVSKTGGHLSSNLGTVELTIALHAVFNT 65

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+++WDVG Q YAHK+LTGRR  + TLR   G+SG+  R+ES YD F  GH   S+SA
Sbjct: 66  PEDRLVWDVGHQCYAHKVLTGRREGMSTLRMHGGVSGFPKRAESPYDTFGVGHSSTSISA 125

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKI 260
            LGMA+A   KG+    + +I +G   AG A+EAM+NAG  D++M+VILND+  S+ P  
Sbjct: 126 ALGMALAAKHKGEDRKAIAIIGDGAMSAGMAFEAMNNAGVADADMLVILNDNEMSISP-- 183

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQ 320
                  + AL++ L+R+ SSK++   RE  + M       + E A + +E+ +GMI P 
Sbjct: 184 ------PVGALNNILTRLTSSKTYNVAREAGRHMLG-FAPPLLELARRAEEHVKGMIAP- 235

Query: 321 GSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSEA 380
             TLFEE G +Y GP+DGH+++ LI  L+ +  L   GP  +HV+T++ +  +  +    
Sbjct: 236 -GTLFEEFGFHYYGPIDGHDLDALIPTLENLKKL--KGPKFLHVITKKGQGYKLAENDPI 292

Query: 381 IEK--QQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQ 438
           +     +  A D      G    TY   F + L   A+ D  +V +   M     +  F 
Sbjct: 293 LYHGVGKFAACDGIQSAKGPAKLTYTQVFGDWLCDMAKADSRLVGITPAMREGSGMVRFS 352

Query: 439 EKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRF 498
            +  +RYFDVG+AEQHAVTF+AGLAC GLKP   I S FLQR YDQ+V+DV  Q LPV F
Sbjct: 353 AEHADRYFDVGIAEQHAVTFAAGLACEGLKPVVAIYSTFLQRGYDQLVHDVALQNLPVIF 412

Query: 499 VITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRY 558
            +   GLVG+DGPT  G FD++F++C+PNM VMAP+DE E   M++T  +ID  P   RY
Sbjct: 413 AVDRGGLVGADGPTHHGTFDLSFVTCIPNMTVMAPADEAECRKMLSTAMTIDG-PSMVRY 471

Query: 559 PRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTV 618
           PRG+   T +P  +   + +GKG +   GKD+ALL +G++V   + A   L     D TV
Sbjct: 472 PRGSGTGT-IPEAKLDTLPVGKGDIRRRGKDIALLAFGSLVAAAVAAGEEL-----DATV 525

Query: 619 ADARFCKPLDIKLVRELCQNHTFLITVEEGS-IGGFGSHVSHFIALDGLLDSGVKWRPIV 677
           A+ RF KPLD  L+ EL  NH+ L+++EE + IGG GS +   +A  GL    V    + 
Sbjct: 526 ANMRFIKPLDADLIVELAGNHSLLVSIEENAVIGGAGSEIERVLAERGLQ---VPVLRLG 582

Query: 678 LPDNYIEHASPTQQLALAGL 697
           LPD +I+H    Q LA  GL
Sbjct: 583 LPDRFIDHGEQGQLLAELGL 602


>gi|134298942|ref|YP_001112438.1| deoxyxylulose-5-phosphate synthase [Desulfotomaculum reducens MI-1]
 gi|134051642|gb|ABO49613.1| 1-deoxy-D-xylulose-5-phosphate synthase [Desulfotomaculum reducens
           MI-1]
          Length = 635

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 263/651 (40%), Positives = 389/651 (59%), Gaps = 31/651 (4%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           T IL  + +P  LK+L++K+L+ LA+EIR  +   VSKT   L  +L  VELT+ALH VF
Sbjct: 5   TSILKNIASPKDLKNLSLKQLQSLALEIRETIIKTVSKTGGHLAPNLGVVELTIALHCVF 64

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
              VD+I+WDVG Q+Y HK+LTGR +   TLR+  G+SG+    ES +D F  GH   S+
Sbjct: 65  DTSVDRIIWDVGHQSYVHKLLTGRLAQFSTLRQYGGLSGFPKPEESIHDAFATGHSSTSI 124

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LGMA+ RD+KG++  +V VI +G+   G A+EA++ AG+L +NMIV+LND+  S+ P
Sbjct: 125 SAALGMALTRDLKGEKHSVVAVIGDGSLTGGMAFEALNYAGHLKTNMIVVLNDNEMSIAP 184

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRG--MHEWAAKVDEYARGM 316
                   ++ ALS  LSR+++   + + ++    + ++I  G  + +   ++ +  + +
Sbjct: 185 --------NVGALSGYLSRLRTDPKYSKGKDEIADLLQKIPHGPKLLKVVDRLKDSVKYL 236

Query: 317 IGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQ 376
           + P    LFEELG  Y+GPVDGH+ + ++++LQ+  ++   GPVLVHV+T   ++ +   
Sbjct: 237 VVP--GMLFEELGFTYLGPVDGHDTKAVLTMLQQAKAVS--GPVLVHVIT---KKGKGYL 289

Query: 377 KSEAIEKQQEGAS----DSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
            +E    +  G      ++ ++       +Y + F E +V  A++D  I+ + A M    
Sbjct: 290 PAEQNPDRYHGVGPFDLETGTVVKSQGPPSYTEVFGETIVKLAKEDDRIIGITAAMPSGT 349

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            L  F ++FP+RYFDVG+AEQHAVT +AG+A  G +P   I S FLQRAYDQV++DV  Q
Sbjct: 350 GLNSFAKEFPKRYFDVGIAEQHAVTMAAGMAATGYRPIAAIYSTFLQRAYDQVLHDVCMQ 409

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
            LPV F +   GLVG DGPT  G FDI+F+  +PN+++M+P DE+EL  M+ T  + +  
Sbjct: 410 NLPVTFALDRGGLVGDDGPTHHGVFDISFLRNIPNLVMMSPKDENELQHMLKTAVTYNG- 468

Query: 553 PVCFRYPRGAIVRTDL-PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSK 611
           PV  RYPRG  +   +    + +P  IGKG+V+ EG DV LL  G MVQ  LKA   LS 
Sbjct: 469 PVAIRYPRGNGIGISMDEKLQCLP--IGKGEVIREGNDVLLLAIGNMVQEALKAAESLSA 526

Query: 612 LGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSG 670
            GI+ TV +AR+ KPLD +L+         ++T+EE  + GGFGS +       GL D  
Sbjct: 527 QGIEATVINARYTKPLDEELILNYAGRIKNIVTIEEHVLAGGFGSSILELFESSGLTD-- 584

Query: 671 VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALS---LLGRTREALL 718
           VK + + LPD +IEH +  Q  A  GLT   I  T L+      RTR+  L
Sbjct: 585 VKMKRLGLPDEFIEHGTQNQLRAQYGLTSAGIVDTVLNHHIHKNRTRKEFL 635


>gi|398832980|ref|ZP_10591126.1| 1-deoxy-D-xylulose-5-phosphate synthase [Herbaspirillum sp. YR522]
 gi|398222367|gb|EJN08744.1| 1-deoxy-D-xylulose-5-phosphate synthase [Herbaspirillum sp. YR522]
          Length = 636

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 270/652 (41%), Positives = 390/652 (59%), Gaps = 48/652 (7%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L+ +  P  L+ L+ ++LK LA E+R  +   VSKT   L S+L  VELT+ALH+VF+ 
Sbjct: 17  LLNTINEPADLRRLSRQQLKPLAEELRGFVLDSVSKTGGHLSSNLGTVELTLALHYVFNT 76

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+I+WDVG QTY HKILTGRR  + +LR++DGISG+  R ES+YD F   H   S+SA
Sbjct: 77  PHDRIVWDVGHQTYPHKILTGRRERMSSLRQQDGISGFPRRDESDYDTFGTAHSSTSISA 136

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAG-YLDSNMIVILNDSRHSLHPK 259
            LGMA+A   +G     + VI +G   AG A+EA++NAG + D N++VILND+  S+ P 
Sbjct: 137 ALGMALAARTQGSDRHAIAVIGDGAMTAGMAFEALNNAGVHDDVNLLVILNDNDMSISP- 195

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                   + AL+  L+R+ S K + + R+V K +   +   + E A +++E+A+GM+ P
Sbjct: 196 -------PVGALNRYLARLMSGKFYAKARDVGKSV---LPGPVLELAKRLEEHAKGMVVP 245

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             +T+FEE G  YIGP+DGH+++ LI  LQ +  L   GP  +HVVT   R+ +  + +E
Sbjct: 246 --ATMFEEFGFNYIGPIDGHDLDSLIPTLQNLKQL--KGPQFLHVVT---RKGQGYKLAE 298

Query: 380 AIEKQQEGASDSNS----LPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQ 435
           A      G    N      P  +   TY   F E L   A  D+  V +   M     + 
Sbjct: 299 ADPVLYHGPGKFNPSEGIKPSTSSKATYTQVFGEWLCDMAGADQRAVGITPAMREGSGMV 358

Query: 436 LFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLP 495
            F+++FP+RY+DVG+AEQHAVTF+AG+AC G+KP   I S FLQRAYDQ+++DV  Q L 
Sbjct: 359 AFEKQFPQRYYDVGIAEQHAVTFAAGMACEGMKPVVAIYSTFLQRAYDQLIHDVALQNLD 418

Query: 496 VRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVC 555
           V F +  AGLVG+DG T  G +D+ F+ C+PNM+VMA SDE+E   M++T       P  
Sbjct: 419 VTFALDRAGLVGADGATHAGNYDLAFLRCIPNMVVMAASDENECRQMLSTAYQYPG-PAA 477

Query: 556 FRYPR----GAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSK 611
            RYPR    GA+V+  L       + +G+G+V  +G+ +A+L +G MV   L+A   L  
Sbjct: 478 VRYPRGAGVGAVVQKSLE-----TLPLGRGEVRRQGRGIAILAFGTMVAPALQAGDKL-- 530

Query: 612 LGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSG 670
              + TVA+ RF KPLD+ LVR+L  +H  L+TVEEG I GG G+ VS  +A  G++   
Sbjct: 531 ---NATVANMRFVKPLDVDLVRQLAADHDALVTVEEGCIMGGAGAAVSEALAAAGIV--- 584

Query: 671 VKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLL 719
              +PI+   LPD +I+H    Q L   GL G  IAA+ +   G+ +  L++
Sbjct: 585 ---KPILHLGLPDRFIDHGDAAQLLVQCGLDGAGIAASIVERFGKDQPRLVV 633


>gi|407710084|ref|YP_006793948.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia
           phenoliruptrix BR3459a]
 gi|407238767|gb|AFT88965.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia
           phenoliruptrix BR3459a]
          Length = 635

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 275/641 (42%), Positives = 378/641 (58%), Gaps = 46/641 (7%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L  +++P  L+ L  ++L+ LA E+R+ +   VS+T   L S+L  VELT+ALH+VF  
Sbjct: 4   LLKTIDDPAALRRLDRRQLQPLADELRAFVLDSVSQTGGHLSSNLGTVELTIALHYVFDT 63

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+I+WDVG QTY HKILTGRR  + TLR+  GISG+  R ESEYD F   H   S+SA
Sbjct: 64  PHDRIVWDVGHQTYPHKILTGRRDRMSTLRQLGGISGFPKRDESEYDTFGTAHSSTSISA 123

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDS-NMIVILNDSRHSLHPK 259
            LGMA+A  ++G     + VI +G   AG A+EAM+NAG  D   ++VILND+  S+ P 
Sbjct: 124 ALGMAIASKLQGDNRMGIAVIGDGAMTAGMAFEAMNNAGVEDDVPLLVILNDNDMSISP- 182

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                   + AL+  L+R+ S + +   R   + +  R+   M + A K++E+A+GMI P
Sbjct: 183 -------PVGALNRHLARLMSGRFYAAARAGVERVL-RVAPPMLDLARKLEEHAKGMIVP 234

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             +TLFEE G  YIGP+DGH+++ LI  LQ +  L   GP  +HVVT   ++ +  + +E
Sbjct: 235 --ATLFEEFGFNYIGPIDGHDLDSLIPTLQNIKEL--RGPQFLHVVT---KKGQGYKLAE 287

Query: 380 AIEKQQEGASDSNSL-----PFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
           A      G    N             +TY   F E L   AE D  +V +   M     +
Sbjct: 288 ADPVLYHGPGKFNPAEGIKPAVSPSKKTYTQVFGEWLCDAAELDSRVVGITPAMREGSGM 347

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F+++FP+RYFDVG+AEQHAVTF+ GLA  G+KP   I S FLQRAYDQ+++DV  Q L
Sbjct: 348 VEFEKRFPDRYFDVGIAEQHAVTFAGGLAAEGMKPVVAIYSTFLQRAYDQLIHDVALQNL 407

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PV F I  AGLVG+DG T  GA+D+ FM C+PNM+VM PSDE+E   M+ T A     P 
Sbjct: 408 PVVFAIDRAGLVGADGATHAGAYDLAFMRCIPNMMVMVPSDENESRQMLYT-ALQQSCPT 466

Query: 555 CFRYPRGAIVRTDLPGYRGI-PIEIGKGKVLVE-----GKDVALLGYGAMVQNCLKARAL 608
             RYPRGA   T +   + +  + +GKG+V  E     GK +A+L +G MV   L A   
Sbjct: 467 AVRYPRGA--GTGVATVKQMAALPVGKGEVRRETSQPAGKRIAILAFGTMVAPSLAAAEQ 524

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLL 667
           L     D TVA+ RF KPLD +LVREL + H  ++TVEEG + GG GS       ++ LL
Sbjct: 525 L-----DATVANMRFVKPLDAELVRELAETHDAIVTVEEGCVMGGAGS-----ACVEALL 574

Query: 668 DSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAAT 705
           +SGV  RP++   LPD +I+H  P + LA  GL    IA +
Sbjct: 575 ESGV-MRPVLQLGLPDRFIDHGDPAKLLAACGLDAAGIAKS 614


>gi|418293778|ref|ZP_12905680.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas stutzeri ATCC
           14405 = CCUG 16156]
 gi|379065163|gb|EHY77906.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas stutzeri ATCC
           14405 = CCUG 16156]
          Length = 632

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 273/650 (42%), Positives = 384/650 (59%), Gaps = 45/650 (6%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD    P +L+ L   EL++LA E+R EL   V +T     + L  +ELT+ALH+V+
Sbjct: 15  TPVLDRAATPEQLRRLGEAELEELANELRQELLYSVGRTGGHFGAGLGVIELTIALHYVY 74

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR  + TLR+KDG++ +  R ESEYD F  GH   S+
Sbjct: 75  DTPDDRLVWDVGHQAYPHKILTGRRERMGTLRQKDGLAAFPRRVESEYDTFGVGHSSTSI 134

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LGMAVA  +KG++   + VI +G   AG A+EA+++A  + +NM+V+LND+  S+  
Sbjct: 135 SAALGMAVAARLKGEQRKSIAVIGDGALTAGMAFEALNHAPEVGANMLVVLNDNDMSI-- 192

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                   ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+GM+ 
Sbjct: 193 ------SRNVGGLSNYLAKILSSRTYSSMREGSKKILSRL-PGAWEIARRTEEYAKGMLV 245

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR----RAED 374
           P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +HVVT++ +       D
Sbjct: 246 P--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLD--GPQFLHVVTKKGKGFAPAEAD 301

Query: 375 TQKSEAIEKQQE-GASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
                AI K +  GA  +   P G     Y + F + L   A  D  +  +   M+    
Sbjct: 302 PITWHAISKLEPVGAPPAPKKPLGP---KYSNVFGQWLCDMAAADPRLTGITPAMKEGSD 358

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L  F E++PERYFDV +AEQHAVT +AG+AC G+KP   I S FLQRAYDQ+++DV  Q 
Sbjct: 359 LVAFSERYPERYFDVAIAEQHAVTLAAGMACEGMKPVVAIYSTFLQRAYDQLIHDVAVQN 418

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           L V F I  AGLVG DGPT  G+FD++++ C+P M+VM PSDE+E+  M+ T    +  P
Sbjct: 419 LDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDENEMRRMLTTGYHFEG-P 477

Query: 554 VCFRYPRGAIVRTDL-PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
              RYPRG+     + PG    P+EIGK  V  +G  VALL +G  +   L+    L   
Sbjct: 478 AAVRYPRGSGPNAAIEPGLE--PLEIGKAVVRRKGSKVALLVFGVQLPEALQVGEAL--- 532

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGV 671
             D TV D RF KPLD  L+REL  +H  L+T+EE SI  G GS V+ F+  + +L    
Sbjct: 533 --DATVVDMRFVKPLDEALLRELAGSHELLVTIEENSIMAGAGSAVAEFLTGESIL---- 586

Query: 672 KWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALL 718
             +P++   LPD Y+EHA P++ LA  GL    I A       R R+A L
Sbjct: 587 --KPMLHLGLPDYYVEHAKPSEMLAECGLDAAGIEAAV-----RKRQAAL 629


>gi|429331880|ref|ZP_19212620.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas putida CSV86]
 gi|428763391|gb|EKX85566.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas putida CSV86]
          Length = 632

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 272/648 (41%), Positives = 383/648 (59%), Gaps = 46/648 (7%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD    P  L+ L   +L+ LA E+R EL   V +T     + L  +ELT+ALH+VF
Sbjct: 15  TPLLDRAATPAGLRRLAEADLENLADELRQELLYSVGQTGGHFGAGLGVIELTIALHYVF 74

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR  ++TLR+KDG++ +  RSESEYD F  GH   S+
Sbjct: 75  DTPDDRLVWDVGHQAYPHKILTGRRERMNTLRQKDGLAAFPRRSESEYDTFGVGHSSTSI 134

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LGMA+A  ++ +    + VI +G   AG A+EA+++A  ++++M+VILND+  S+  
Sbjct: 135 SAALGMAIAARLRNEARKSIAVIGDGALTAGMAFEALNHAQEVNADMLVILNDNDMSI-- 192

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                   ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+GM+ 
Sbjct: 193 ------SRNVGGLSNYLAKILSSRTYASMREGSKKVLSRL-PGAWEIARRTEEYAKGMLV 245

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---RAE-D 374
           P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +HVVT++ +    AE D
Sbjct: 246 P--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDL--KGPQFLHVVTKKGKGFAPAEVD 301

Query: 375 TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
                AI K  E      + P       Y   F + L   A  D+ +V +   M+    L
Sbjct: 302 PIGYHAITK-LEPLDAPAAAPKKAGGPKYSAVFGQWLCDMAAADERLVGITPAMKEGSDL 360

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F E++P+RYFDV +AEQHAVT +AG+AC G KP   I S FLQRAYDQ+++DV  Q L
Sbjct: 361 VAFSERYPQRYFDVAIAEQHAVTLAAGMACEGSKPVVAIYSTFLQRAYDQLIHDVAVQNL 420

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
            V F I  AGLVG DGPT  G+FD++++ C+P M+VM PSDE+EL  M++T   + + P 
Sbjct: 421 DVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDENELRRMLST-GHLYNGPA 479

Query: 555 CFRYPRG----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLS 610
             RYPRG    A +   L      P+EIGKG +  +G  VALL +G  +   LK    L 
Sbjct: 480 AVRYPRGSGPNAPIEDSLD-----PLEIGKGVIRRQGSKVALLVFGVQLAEALKVAETL- 533

Query: 611 KLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDS 669
               + TV D RF KPLD  LV EL  +H  L+T+EE +I GG G+ V  F+A + +L  
Sbjct: 534 ----NATVVDMRFVKPLDEALVLELAGSHDLLVTIEENAIMGGAGAAVGEFLAREAVL-- 587

Query: 670 GVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAATA---LSLLG 711
               +P++   LPD Y+EHA P Q LA  GL    I A+    + LLG
Sbjct: 588 ----KPLLHLGLPDVYVEHAKPAQMLAECGLDAAGIEASVRKRMELLG 631


>gi|323529244|ref|YP_004231396.1| deoxyxylulose-5-phosphate synthase [Burkholderia sp. CCGE1001]
 gi|323386246|gb|ADX58336.1| deoxyxylulose-5-phosphate synthase [Burkholderia sp. CCGE1001]
          Length = 635

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 275/641 (42%), Positives = 378/641 (58%), Gaps = 46/641 (7%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L  +++P  L+ L  ++L+ LA E+R+ +   VS+T   L S+L  VELT+ALH+VF  
Sbjct: 4   LLKTIDDPAALRRLDRRQLQPLADELRAFVLDSVSQTGGHLSSNLGTVELTIALHYVFDT 63

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+I+WDVG QTY HKILTGRR  + TLR+  GISG+  R ESEYD F   H   S+SA
Sbjct: 64  PHDRIVWDVGHQTYPHKILTGRRDRMSTLRQLGGISGFPKRDESEYDTFGTAHSSTSISA 123

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDS-NMIVILNDSRHSLHPK 259
            LGMA+A  ++G     + VI +G   AG A+EAM+NAG  D   ++VILND+  S+ P 
Sbjct: 124 ALGMAIASKLQGDNRMGIAVIGDGAMTAGMAFEAMNNAGVEDDVPLLVILNDNDMSISP- 182

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                   + AL+  L+R+ S + +   R   + +  R+   M + A K++E+A+GMI P
Sbjct: 183 -------PVGALNRHLARLMSGRFYAAARAGVERVL-RVAPPMLDLARKLEEHAKGMIVP 234

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             +TLFEE G  YIGP+DGH+++ LI  LQ +  L   GP  +HVVT   ++ +  + +E
Sbjct: 235 --ATLFEEFGFNYIGPIDGHDLDSLIPTLQNIKEL--RGPQFLHVVT---KKGQGYKLAE 287

Query: 380 AIEKQQEGASDSNSL-----PFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
           A      G    N             +TY   F E L   AE D  +V +   M     +
Sbjct: 288 ADPVLYHGPGKFNPAEGIKPAVSPSKKTYTQVFGEWLCDAAELDSRVVGITPAMREGSGM 347

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F+++FP+RYFDVG+AEQHAVTF+ GLA  G+KP   I S FLQRAYDQ+++DV  Q L
Sbjct: 348 VEFEKRFPDRYFDVGIAEQHAVTFAGGLAAEGMKPVVAIYSTFLQRAYDQLIHDVALQNL 407

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PV F I  AGLVG+DG T  GA+D+ FM C+PNM+VM PSDE+E   M+ T A     P 
Sbjct: 408 PVVFAIDRAGLVGADGATHAGAYDLAFMRCIPNMMVMVPSDENESRQMLYT-ALQQSCPT 466

Query: 555 CFRYPRGAIVRTDLPGYRGI-PIEIGKGKVLVE-----GKDVALLGYGAMVQNCLKARAL 608
             RYPRGA   T +   + +  + +GKG+V  E     GK +A+L +G MV   L A   
Sbjct: 467 AVRYPRGA--GTGVATVKQMAALPVGKGEVRRETSQPAGKRIAILAFGTMVAPSLAAAEQ 524

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLL 667
           L     D TVA+ RF KPLD +LVREL + H  ++TVEEG + GG GS       ++ LL
Sbjct: 525 L-----DATVANMRFVKPLDAELVRELAETHDAIVTVEEGCVMGGAGS-----ACVEALL 574

Query: 668 DSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAAT 705
           +SGV  RP++   LPD +I+H  P + LA  GL    IA +
Sbjct: 575 ESGVT-RPVLQLGLPDRFIDHGDPAKLLAACGLDAAGIAKS 614


>gi|226944164|ref|YP_002799237.1| 1-deoxy-D-xylulose-5-phosphate synthase [Azotobacter vinelandii DJ]
 gi|226719091|gb|ACO78262.1| 1-deoxy-D-xylulose-5-phosphate synthase [Azotobacter vinelandii DJ]
          Length = 633

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 276/643 (42%), Positives = 379/643 (58%), Gaps = 41/643 (6%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           ++  TP+LD    P RL+ L   EL+ LA E+R EL   V +T     + L  +ELT+AL
Sbjct: 11  ERPATPLLDRAATPDRLRQLGEAELEVLADELRQELLYTVGQTGGHFGAGLGVIELTIAL 70

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H+VF  P D+++WDVG Q Y HKILTGRR  + TLR+KDGI+ +  RSES YD F  GH 
Sbjct: 71  HYVFDTPGDRLVWDVGHQAYPHKILTGRRERMLTLRQKDGIAAFPRRSESPYDTFGVGHS 130

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+ A LGMA+A  +KG+R   + VI +G   AG A+EA+++A  + ++M+V+LND+  
Sbjct: 131 STSIGAALGMAIAARLKGERRRCIAVIGDGALTAGMAFEALNHASDVQADMLVVLNDNDM 190

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+          ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+
Sbjct: 191 SI--------SKNVGGLSNYLAKILSSRTYASMREGSKNILSRL-PGAWEIARRTEEYAK 241

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---- 370
           GM+ P   TLFEELG  YIGP+DGH++  L++ L+ +  L   GP L+HVVT++ +    
Sbjct: 242 GMLVP--GTLFEELGWNYIGPIDGHDLPTLLATLRNMRDL--KGPQLLHVVTKKGKGFAP 297

Query: 371 RAEDTQKSEAIEK-QQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGME 429
              D     AI K + EG++     P       Y   F   L   A  D  +  +   M+
Sbjct: 298 AEADPIGYHAITKLEPEGSAPRQPGP-----PRYSSVFGRWLCDMAAADPRLAGITPAMK 352

Query: 430 MDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDV 489
               L  F ++FPERYFDV +AEQHAVT +AG+AC GLKP   I S FLQRAYDQ+++DV
Sbjct: 353 EGSDLVAFSQRFPERYFDVAIAEQHAVTLAAGMACDGLKPVVAIYSTFLQRAYDQLIHDV 412

Query: 490 DQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASI 549
             Q L V F I  AGLVG DGPT  G+FD++++ C+P M+VM PSDE+EL  ++ T   +
Sbjct: 413 AVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDENELRRLL-TTGYL 471

Query: 550 DDRPVCFRYPRGAIVRTDL-PGYRGIPIEIGKGKVL-----VEGKDVALLGYGAMVQNCL 603
            + P   RYPRG+     L PG    P+ IGKG +       +G  VALL +G  V   L
Sbjct: 472 FEGPAAVRYPRGSGPNAALEPGLE--PLPIGKGVLRRRSGKSDGPRVALLVFGVQVAEAL 529

Query: 604 KARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIA 662
           +    L     D TVAD RF KPLD +LVREL   H  L+TVEE SI GG GS V+ ++A
Sbjct: 530 RVAGKL-----DATVADMRFVKPLDEELVRELAAGHELLVTVEENSIMGGAGSAVAEYLA 584

Query: 663 LDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAAT 705
             GLL   +    + LPD Y+EHA P + LA  GL    I A 
Sbjct: 585 EAGLLRPLLH---LGLPDYYVEHARPAEMLAECGLDAAGIEAA 624


>gi|300867681|ref|ZP_07112326.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oscillatoria sp. PCC 6506]
 gi|300334264|emb|CBN57498.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oscillatoria sp. PCC 6506]
          Length = 635

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 268/643 (41%), Positives = 381/643 (59%), Gaps = 47/643 (7%)

Query: 82  LDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAP 141
           L  + +P +L  L+I +L+Q+A +IR +    V+ +   L   L  VELT+AL+      
Sbjct: 3   LSELTHPNQLHGLSINQLQQIARQIREKHLETVATSGGHLGPGLGVVELTIALYQTLDLD 62

Query: 142 VDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAG 201
            DK+LWDVG Q Y HK+LTGR    HTLR+KDG++GY  R ES++D F AGH   S+SAG
Sbjct: 63  RDKVLWDVGHQAYPHKLLTGRYDRFHTLRQKDGVAGYLKRCESKFDHFGAGHASTSISAG 122

Query: 202 LGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPKI 260
           LGMA+ARD+KG+   +V VI +G    G A EA+++AG+L  +N++V+LND+  S+ P  
Sbjct: 123 LGMALARDMKGENFKVVAVIGDGALTGGMALEAINHAGHLPKTNLLVVLNDNEMSISP-- 180

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRI---GRGMHEWAAKVDEYARGMI 317
                 ++ A+   L++++ S   + L++  +   K I   G        ++ E  + + 
Sbjct: 181 ------NVGAIPRYLNKMRLSAPVQFLKDNLEEQFKHIPFVGETFTPEMERLKEGMKRLA 234

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQK 377
            P+   + EELG  Y+GPVDGHN+E+LI+  ++  ++   GPVLVHVVT +        K
Sbjct: 235 VPKVGAVIEELGFTYMGPVDGHNLEELIATFKQAHTI--QGPVLVHVVTVKG-------K 285

Query: 378 SEAI-EKQQEGASDSNSLPFG---------NYSR--TYDDCFIEALVMEAEKDKDIVVVH 425
             AI EK Q G    N  PF          N  +   Y   F  AL+  AE +  IV + 
Sbjct: 286 GYAIAEKDQVGYHAQN--PFNLATGKAIPSNRPKPPAYSKVFAHALIKLAEDNPKIVAIT 343

Query: 426 AGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQV 485
           A M     L  FQEK P++Y DVG+AEQHAVT +AGLAC G++P   I S FLQRAYDQ+
Sbjct: 344 AAMATGTGLDKFQEKLPKQYIDVGIAEQHAVTCAAGLACEGIRPVVAIYSTFLQRAYDQI 403

Query: 486 VNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVAT 545
           V+DV  Q+LPV F +  AG+VG+DGPT  G +DI+++ CLPNM++MAP DE EL  M+ T
Sbjct: 404 VHDVCIQKLPVFFCLDRAGIVGADGPTHQGMYDISYLRCLPNMVLMAPKDEAELQRMIVT 463

Query: 546 VASIDDRPVCFRYPRGAIVRTDL--PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCL 603
             +    P+  RYPRG      L   G+  +P  IGKG++L +G DV +LGYG+MVQ  +
Sbjct: 464 GINHTSGPIAMRYPRGNGYGVPLMEEGWEELP--IGKGEILRQGDDVLMLGYGSMVQPAM 521

Query: 604 KARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIA 662
           +A  +LS+ GI+ TV +ARF KPLD +L+  L      +IT+EEG + GGFGS V+    
Sbjct: 522 QAAEILSEHGIEATVVNARFAKPLDEELILPLAHKIGRVITLEEGCVMGGFGSAVA---- 577

Query: 663 LDGLLDSGVKWRPIVL--PDNYIEHASPTQQLALAGLTGHHIA 703
            + LLD  +  + I +  PD  ++HA+P Q     GL    IA
Sbjct: 578 -ESLLDRDIAAKVIRIGVPDVLVDHATPEQSFTELGLNPAQIA 619


>gi|254248779|ref|ZP_04942099.1| Deoxyxylulose-5-phosphate synthase [Burkholderia cenocepacia PC184]
 gi|124875280|gb|EAY65270.1| Deoxyxylulose-5-phosphate synthase [Burkholderia cenocepacia PC184]
          Length = 646

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 274/641 (42%), Positives = 380/641 (59%), Gaps = 46/641 (7%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L  +++P  L+ L  ++L+ LA E+R+ +   VSKT   L S+L  VELT+ALH+VF+ 
Sbjct: 16  LLKTIDDPADLRRLDRRQLQPLADELRAFVLDSVSKTGGHLSSNLGTVELTIALHYVFNT 75

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+I+WDVG QTY HKILTGRR  +H+LR+ DGISG+  RSESEYD F   H   S+SA
Sbjct: 76  PNDRIVWDVGHQTYPHKILTGRRDQMHSLRQYDGISGFPRRSESEYDTFGTAHSSTSISA 135

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPK 259
            LGMA+   + G     + VI +G   AG A+EAM+NAG   ++ ++VILND+  S+ P 
Sbjct: 136 ALGMAIGSQLNGDDRFSIAVIGDGAMTAGMAFEAMNNAGVSENAKLLVILNDNDMSISP- 194

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                   + AL+  L+R+ S + +   R   + +   +   + E A K++E+A+GM+ P
Sbjct: 195 -------PVGALNRHLARLMSGRFYAAARAGVERVLS-VAPPVLELARKLEEHAKGMVVP 246

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             +TLFEE G  YIGP+DGH+++ LI  LQ +  L   GP  +HVVT   ++ +  + +E
Sbjct: 247 --ATLFEEFGFNYIGPIDGHDLDSLIPTLQNIREL--RGPQFLHVVT---KKGQGYKLAE 299

Query: 380 AIEKQQEGASDSNSLPFGNYS-----RTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
           A      G    N       S     +TY   F E L  EAE+D  +V +   M     +
Sbjct: 300 ADPVLYHGPGKFNPAEGIKPSTTPAKKTYTQVFGEWLCDEAERDTRVVGITPAMREGSGM 359

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F+++F +RY+DVG+AEQHAVTF+ GLA  GLKP   I S FLQRAYDQ+++DV  Q L
Sbjct: 360 VEFEKRFKDRYYDVGIAEQHAVTFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNL 419

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PV F I  AGLVG+DG T  GA+D+ FM C+PNM +MA SDE+E   M+ T A     P 
Sbjct: 420 PVVFAIDRAGLVGADGATHAGAYDLAFMRCIPNMTIMAASDENECRQMLHT-ALQQPNPT 478

Query: 555 CFRYPRGAIVR-TDLPGYRGIPIEIGKGKVL-----VEGKDVALLGYGAMVQNCLKARAL 608
             RYPRGA      +  +  IP  +GKG+V       EGK VA+L +G MV   L A   
Sbjct: 479 AVRYPRGAGTGVATVKEFTEIP--LGKGEVRRRTSQPEGKRVAILAFGTMVAPSLAAAEE 536

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLL 667
           L     D TVA+ RF KP+D  LVREL + H +L+TVEEG + GG GS       ++ L+
Sbjct: 537 L-----DATVANMRFVKPVDAALVRELAETHDYLVTVEEGCVMGGAGS-----ACVEALM 586

Query: 668 DSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAAT 705
           +SGV  RP++   LPD +++H    + LA  GL G  IA +
Sbjct: 587 ESGV-IRPVLQLGLPDQFVDHGDHAKLLAQCGLDGAGIAKS 626


>gi|431925835|ref|YP_007238869.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas stutzeri RCH2]
 gi|431824122|gb|AGA85239.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas stutzeri RCH2]
          Length = 632

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 271/647 (41%), Positives = 385/647 (59%), Gaps = 43/647 (6%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD    P +L+ L   EL++LA E+R EL   V +T     + L  +ELT+ALH+V+
Sbjct: 15  TPVLDRAATPEQLRRLGEAELEELANELRQELLYSVGRTGGHFGAGLGVIELTIALHYVY 74

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR  + TLR+K+G++ +  RSESEYD F  GH   S+
Sbjct: 75  DTPDDRLVWDVGHQAYPHKILTGRRERMGTLRQKEGLAAFPRRSESEYDTFGVGHSSTSI 134

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LGMAVA  +KG++   + VI +G   AG A+EA+++A  + +NM+V+LND+  S+  
Sbjct: 135 SAALGMAVAARLKGEQRKSIAVIGDGALTAGMAFEALNHAPEVGANMLVVLNDNDMSI-- 192

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                   ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+GM+ 
Sbjct: 193 ------SRNVGGLSNYLAKILSSRTYSSMREGSKKILSRL-PGAWEIARRTEEYAKGMLV 245

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR----RAED 374
           P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +HVVT++ +       D
Sbjct: 246 P--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLD--GPQFLHVVTKKGKGFAPAEAD 301

Query: 375 TQKSEAIEKQQE-GASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
                AI K +  GA      P G     Y + F + L   A  D  +  +   M+    
Sbjct: 302 PITWHAISKLEPVGAPVKPKKPSGP---KYSNVFGQWLCAMAAADPRLTGITPAMKEGSD 358

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L  F E++P+RYFDV +AEQHAVT +AG+AC G+KP   I S FLQRAYDQ+++DV  Q 
Sbjct: 359 LVAFSERYPQRYFDVAIAEQHAVTLAAGMACEGMKPVVAIYSTFLQRAYDQLIHDVAVQN 418

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           L V F I  AGLVG DGPT  G+FD++++ C+P M+VM PSDE+E+  M+ T    +  P
Sbjct: 419 LDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDENEMRRMLTTGYHFEG-P 477

Query: 554 VCFRYPRGAIVRTDL-PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
              RYPRG+     + PG    P+EIGK  V  +G  +ALL +G  +   ++    L   
Sbjct: 478 AAVRYPRGSGPNAAIEPGLE--PLEIGKAVVRRQGSKIALLVFGVQLPEAMQVGEAL--- 532

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGV 671
             D TV D RF KPLD  L+REL  +H  L+TVEE SI GG GS V+ F+  + +L    
Sbjct: 533 --DATVVDMRFVKPLDEALLRELAGSHELLVTVEENSIMGGAGSAVAEFLTGESIL---- 586

Query: 672 KWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAATA---LSLLGR 712
             +P++   LPD Y+EHA P++ LA  GL    I A     L+ LG+
Sbjct: 587 --KPLLHLGLPDYYVEHAKPSEMLAECGLDAAGIEAAVRKRLATLGK 631


>gi|386827785|ref|ZP_10114892.1| 1-deoxy-D-xylulose-5-phosphate synthase [Beggiatoa alba B18LD]
 gi|386428669|gb|EIJ42497.1| 1-deoxy-D-xylulose-5-phosphate synthase [Beggiatoa alba B18LD]
          Length = 638

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 265/636 (41%), Positives = 379/636 (59%), Gaps = 47/636 (7%)

Query: 76  KEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALH 135
           K   P+L+ +++P +L+ L+ ++L QLA E+R  L + VS+      S+L  VELT+ALH
Sbjct: 5   KNTLPLLEQIDSPAQLRDLSEEQLPQLASELREFLINTVSRIGGHFSSNLGTVELTIALH 64

Query: 136 HVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGC 195
           +VF+ P D+++WDVG Q+Y HKILTGRR  +HT+R+  G+SG+  R+ESEYD F  GH  
Sbjct: 65  YVFNTPDDRLVWDVGHQSYPHKILTGRRDKMHTIRQPHGLSGFPKRTESEYDTFGVGHSS 124

Query: 196 NSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHS 255
            S+SA LGMA+A  + G    ++ VI +G   AG A+EA+ +AG +D++++VILND+  S
Sbjct: 125 TSISAALGMAIASKLAGINRKVMAVIGDGALTAGMAFEALEHAGDVDADLLVILNDNDMS 184

Query: 256 LHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARG 315
           + P        ++  LS+ L++I SS+ +  +R+ +K +  RI   M E A + +E+ +G
Sbjct: 185 ISP--------NVGGLSNYLAKILSSRFYASVRQGSKQLLHRIPT-MRELARRAEEHVKG 235

Query: 316 MIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRR---A 372
           M+ P   TLFEELG  YIGPVDGH++  LI  L+ + +L   GP  +HV+T++ +    A
Sbjct: 236 MVIP--GTLFEELGFNYIGPVDGHDLSALIPTLRNMKAL--KGPQFLHVITQKGKGYPIA 291

Query: 373 EDT----QKSEAIE-KQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAG 427
           ED         A + K  + A  S S P      TY   F + L   A +D  ++ +   
Sbjct: 292 EDNPCTYHGVTAFDPKTGKMAKKSASAP------TYTQIFGQWLCDMAAQDDKLIGITPA 345

Query: 428 MEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVN 487
           M     L  F EKFPERYFDV +AEQH+VT +AGLAC G KP   I S FLQRAYDQ+++
Sbjct: 346 MREGSGLVEFSEKFPERYFDVSIAEQHSVTLAAGLACEGYKPVVAIYSTFLQRAYDQLLH 405

Query: 488 DVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVA 547
           DV  Q LPV F I  AGLVG+DG T  G FDI FM C+PNM++M P+DE+E   M+ T  
Sbjct: 406 DVALQNLPVLFAIDRAGLVGADGATHAGTFDIAFMRCIPNMVIMTPADENECRQMLTTGF 465

Query: 548 SIDDRPVCFRYPRGA--IVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKA 605
                P   RYPRG    +R D      +P  IGK ++  +G  VALL +G ++Q  L+A
Sbjct: 466 LHRAAPCAVRYPRGNGIGIRVD-QALTTLP--IGKAELRRQGHRVALLVFGTLLQTALEA 522

Query: 606 RALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALD 664
              L     D TV + RF KPLD ++V  + Q H  ++T+E+  I GG GS VS +    
Sbjct: 523 AEQL-----DATVINMRFVKPLDNEMVLNMAQQHDLIVTIEDSCIMGGAGSAVSEY---- 573

Query: 665 GLLDSGVKWRPIV---LPDNYIEHASPTQQLALAGL 697
             L +  +  P++   LPD ++EH   +Q LA  GL
Sbjct: 574 --LHTQAQVVPVLQLGLPDEFLEHGIQSQMLADCGL 607


>gi|452746755|ref|ZP_21946565.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas stutzeri NF13]
 gi|452009232|gb|EME01455.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas stutzeri NF13]
          Length = 632

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 269/636 (42%), Positives = 379/636 (59%), Gaps = 40/636 (6%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD    P +L+ L   EL++LA E+R EL   V +T     + L  +ELT+ALH+V+
Sbjct: 15  TPVLDRAATPEQLRRLGEAELEELANELRQELLYSVGQTGGHFGAGLGVIELTIALHYVY 74

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR  + TLR+K+G++ +  RSES+YD F  GH   S+
Sbjct: 75  DTPDDRLVWDVGHQAYPHKILTGRRQRMATLRQKEGLAAFPRRSESQYDTFGVGHSSTSI 134

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LGMAVA  +KG++   + VI +G   AG A+EA+++A  + +NM+V+LND+  S+  
Sbjct: 135 SAALGMAVAARLKGEQRKSIAVIGDGALTAGMAFEALNHAPEVGANMLVVLNDNDMSI-- 192

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                   ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+GM+ 
Sbjct: 193 ------SRNVGGLSNYLAKILSSRTYSSMREGSKKILSRL-PGAWEIARRTEEYAKGMLV 245

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR----RAED 374
           P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +HVVT++ +       D
Sbjct: 246 P--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLD--GPQFLHVVTKKGKGFAPAEAD 301

Query: 375 TQKSEAIEKQQE-GASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
                AI K +  GA      P G     Y + F + L   A  D  +  +   M+    
Sbjct: 302 PITWHAISKLEPVGAPAKPKKPSGP---KYSNVFGQWLCDMAAADPRLTGITPAMKEGSD 358

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L  F E++PERYFDV +AEQHAVT +AG+AC G+KP   I S FLQRAYDQ+++DV  Q 
Sbjct: 359 LVAFSERYPERYFDVAIAEQHAVTLAAGMACEGMKPVVAIYSTFLQRAYDQLIHDVAVQN 418

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           L V F I  AGLVG DGPT  G+FD++++ C+P M+VM PSDE+E+  M+ T    +  P
Sbjct: 419 LDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDENEMRRMLTTGYHFEG-P 477

Query: 554 VCFRYPRGAIVRTDL-PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
              RYPRG+     + PG    P+EIGK  V  +G  VALL +G  +   L+    L   
Sbjct: 478 AAVRYPRGSGPNATIEPGLE--PLEIGKAVVRRQGSKVALLVFGVQLPEALQVGEAL--- 532

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGV 671
             D TV D RF KPLD  L+REL  NH  L+T+EE SI  G GS V+ F+  + +L    
Sbjct: 533 --DATVVDMRFVKPLDEALLRELAGNHELLVTIEENSIMAGAGSAVAEFLTGESIL---- 586

Query: 672 KWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAA 704
             +P++   LPD Y+EHA P++ LA  GL    I A
Sbjct: 587 --KPMLHLGLPDYYVEHAKPSEMLAECGLDAAGIEA 620


>gi|226942934|ref|YP_002798007.1| 1-deoxy-D-xylulose-5-phosphate synthase [Azotobacter vinelandii DJ]
 gi|226717861|gb|ACO77032.1| 1-deoxy-D-xylulose-5-phosphate synthase [Azotobacter vinelandii DJ]
          Length = 633

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 276/643 (42%), Positives = 379/643 (58%), Gaps = 41/643 (6%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           ++  TP+LD    P RL+ L   EL+ LA E+R EL   V +T     + L  +ELT+AL
Sbjct: 11  ERPATPLLDRAATPDRLRQLGEAELEVLADELRQELLYTVGQTGGHFGAGLGVIELTIAL 70

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H+VF  P D+++WDVG Q Y HKILTGRR  + TLR+KDGI+ +  RSES YD F  GH 
Sbjct: 71  HYVFDTPGDRLVWDVGHQAYPHKILTGRRERMLTLRQKDGIAAFPRRSESPYDTFGVGHS 130

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+ A LGMA+A  +KG+R   + VI +G   AG A+EA+++A  + ++M+V+LND+  
Sbjct: 131 STSIGAALGMAIAARLKGERRRCIAVIGDGALTAGMAFEALNHASDVQADMLVVLNDNDM 190

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+          ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+
Sbjct: 191 SI--------SKNVGGLSNYLAKILSSRTYASMREGSKNILSRL-PGAWEIARRTEEYAK 241

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---- 370
           GM+ P   TLFEELG  YIGP+DGH++  L++ L+ +  L   GP L+HVVT++ +    
Sbjct: 242 GMLVP--GTLFEELGWNYIGPIDGHDLPTLLATLRNMRDL--KGPQLLHVVTKKGKGFAP 297

Query: 371 RAEDTQKSEAIEK-QQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGME 429
              D     AI K + EG++     P       Y   F   L   A  D  +  +   M+
Sbjct: 298 AEADPIGYHAITKLEPEGSAPRQPGP-----PRYSSIFGRWLCDMAAADPRLAGITPAMK 352

Query: 430 MDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDV 489
               L  F ++FPERYFDV +AEQHAVT +AG+AC GLKP   I S FLQRAYDQ+++DV
Sbjct: 353 EGSDLVAFSQRFPERYFDVAIAEQHAVTLAAGMACDGLKPVVAIYSTFLQRAYDQLIHDV 412

Query: 490 DQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASI 549
             Q L V F I  AGLVG DGPT  G+FD++++ C+P M+VM PSDE+EL  ++ T   +
Sbjct: 413 AVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDENELRRLL-TTGYL 471

Query: 550 DDRPVCFRYPRGAIVRTDL-PGYRGIPIEIGKGKVL-----VEGKDVALLGYGAMVQNCL 603
            + P   RYPRG+     L PG    P+ IGKG +       +G  VALL +G  V   L
Sbjct: 472 FEGPAAVRYPRGSGPNAPLEPGLE--PLPIGKGVLRRRSGKSDGPRVALLVFGVQVAEAL 529

Query: 604 KARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIA 662
           +    L     D TVAD RF KPLD +LVREL   H  L+TVEE SI GG GS V+ ++A
Sbjct: 530 RVAGKL-----DATVADMRFVKPLDEELVRELAAGHELLVTVEENSIMGGAGSAVAEYLA 584

Query: 663 LDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAAT 705
             GLL   +    + LPD Y+EHA P + LA  GL    I A 
Sbjct: 585 EAGLLRPLLH---LGLPDYYVEHARPAEMLAECGLDAAGIEAA 624


>gi|222110170|ref|YP_002552434.1| 1-deoxy-d-xylulose-5-phosphate synthase [Acidovorax ebreus TPSY]
 gi|254782071|sp|B9MEU8.1|DXS_DIAST RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|221729614|gb|ACM32434.1| deoxyxylulose-5-phosphate synthase [Acidovorax ebreus TPSY]
          Length = 629

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 264/626 (42%), Positives = 376/626 (60%), Gaps = 36/626 (5%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+L+ V +P  L+ L   ELK LA E+R+ +   VSKT   L S+L  VELTVALH VF 
Sbjct: 7   PLLERVNDPADLRRLPRAELKALATELRAFVLESVSKTGGHLSSNLGTVELTVALHAVFD 66

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG QTY HKILTGRR  + +LR+  G+SG+  R+ESEYD F   H   S+S
Sbjct: 67  TPRDRLVWDVGHQTYPHKILTGRRDRMPSLRQLGGLSGFPQRAESEYDTFGTAHSSTSIS 126

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           A LGMA+A   +G     V +I +G   AG A+EA++NAG  D+N++VILND+  S+ P 
Sbjct: 127 AALGMALAAKQRGDERRCVAIIGDGAMTAGMAFEALNNAGVADANLLVILNDNDMSISP- 185

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                   + AL+  L+++ S + + + R+V K + K     + E A ++++ A+GM+ P
Sbjct: 186 -------PVGALNRYLAQLMSGQFYAKARDVGKSVLKN-APPLLELAKRLEQQAKGMVVP 237

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             +TLFE+ G  YIGP+DGH+++ LI  L+ +  L   GP  +HVVT++  +     +++
Sbjct: 238 --ATLFEKFGFNYIGPIDGHDLDSLIPTLENIRGL--KGPQFLHVVTKKG-QGYKLAEAD 292

Query: 380 AIEKQQEGASDSN---SLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQL 436
            +     G  D       P     +T+   F + L   AEKD+ +V +   M     +  
Sbjct: 293 PVAYHGPGKFDPRVGLVKPATPPKQTFTQVFGQWLCDMAEKDERLVGITPAMREGSGMVE 352

Query: 437 FQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPV 496
           F ++FPERY+DVG+AEQHAVTF+AG+AC G KP   I S FLQRAYDQ+++DV  Q LPV
Sbjct: 353 FHQRFPERYYDVGIAEQHAVTFAAGMACEGAKPVVAIYSTFLQRAYDQLIHDVALQNLPV 412

Query: 497 RFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCF 556
            F +  AGLVG+DG T  GA+DI F+ C+PNM +  P+DE E   ++ T A   D PV  
Sbjct: 413 VFALDRAGLVGADGATHAGAYDIAFVRCIPNMSMACPADERECRQLL-TTAYEQDHPVAV 471

Query: 557 RYPRGAIVR-TDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGID 615
           RYPRGA V    LP   G+P   GKG+V  +G+ +A+L +G ++   L+A   L     D
Sbjct: 472 RYPRGAGVGVAPLPDLEGLP--FGKGEVRRKGRRMAILAFGTLLYPALQAAEAL-----D 524

Query: 616 VTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVKWR 674
            TV + R+ KPLD +L+ ++   H  L+TVEEG I GG GS V+  +A  G+       R
Sbjct: 525 ATVVNMRWAKPLDTQLLLQVAAEHDALVTVEEGCIMGGAGSAVAEALAAAGV------QR 578

Query: 675 PIV---LPDNYIEHASPTQQLALAGL 697
           P++   LPD +IEH  P + LAL GL
Sbjct: 579 PLLQLGLPDAFIEHGDPAKLLALQGL 604


>gi|297537808|ref|YP_003673577.1| deoxyxylulose-5-phosphate synthase [Methylotenera versatilis 301]
 gi|297257155|gb|ADI29000.1| deoxyxylulose-5-phosphate synthase [Methylotenera versatilis 301]
          Length = 627

 Score =  457 bits (1176), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 261/640 (40%), Positives = 381/640 (59%), Gaps = 32/640 (5%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           IL+ +++PL+L+ L  K+L  LA E+R+ L + V+KT   L S+L  VELT+ALH+VF+ 
Sbjct: 9   ILNTIDSPLQLRQLERKQLVPLAQELRTFLINSVAKTGGHLSSNLGVVELTIALHYVFNT 68

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+++WDVG QTY HKILTGRR  + +LR   GI+G+  RSESEYD F  GH   S+SA
Sbjct: 69  PDDRLVWDVGHQTYPHKILTGRREQMQSLRNPQGIAGFPRRSESEYDTFGTGHSSTSISA 128

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKI 260
            LGMAVA    G     V +I +G   AG A+EA++NAG +D+N++VILND+  S+    
Sbjct: 129 ALGMAVAAQKAGLERRAVAIIGDGAMTAGMAFEALNNAGDMDANLLVILNDNDMSI---- 184

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQ 320
                 ++ AL++ L+++ SS+ +  +R+  K +   +   M E+A + +E+ +GM+ P 
Sbjct: 185 ----SNNVGALNNYLAKLLSSRFYGTVRKSGKKVLSAVPHVM-EFAKRAEEHVKGMVTP- 238

Query: 321 GSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRR---AEDT-Q 376
             TLFEE G  YIGP+DGH+++ LI  L  +  L   GP  +H+VT++ +    AED   
Sbjct: 239 -GTLFEEFGFNYIGPIDGHDMDALIDTLSNIKQL--KGPQFLHIVTQKGKGFEPAEDNPN 295

Query: 377 KSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQL 436
           K   + K      D+ +    N  +TY   F E LV  A  D  ++ +   M     L  
Sbjct: 296 KFHGVGKFDPFNGDALT---SNTKKTYTQVFGEWLVDMAALDNRLIGITPAMCDGSGLNA 352

Query: 437 FQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPV 496
           F EK+P+RY+DVG+AEQH++TF+AG+AC GLKP   I S FLQRAYDQ+++D+  Q LPV
Sbjct: 353 FAEKYPDRYYDVGIAEQHSLTFAAGMACDGLKPVVAIYSTFLQRAYDQLIHDIALQNLPV 412

Query: 497 RFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCF 556
            F I  AGLVG+DGPT  G+FD++++ C+PN+++MAPSDE+E   M+ T    +      
Sbjct: 413 LFAIDRAGLVGADGPTHAGSFDLSYLRCIPNIVIMAPSDENECRQMLYTGFQYNGV-AAV 471

Query: 557 RYPRGA----IVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
           RYPRG     +++  +        EI +       + VA+L +G+M+  CLKA   L   
Sbjct: 472 RYPRGGGAGVVIQKKMQAIEIGTAEIKRHVASNTKQKVAILSFGSMLNACLKAGEKL--- 528

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFI-ALDGLLDSG 670
             D TV + RF KP+D  ++  L  +HT +ITVEE S+ GG GS V   + A+     S 
Sbjct: 529 --DATVVNMRFVKPIDKIMLENLAIDHTLIITVEENSVMGGAGSAVLEALQAIQNPNKSP 586

Query: 671 VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
           ++   + LPD +IEH      LA  GL    IA+T   L+
Sbjct: 587 IRTLCLGLPDKFIEHGVHETMLAECGLDAEGIASTIAKLI 626


>gi|307726550|ref|YP_003909763.1| deoxyxylulose-5-phosphate synthase [Burkholderia sp. CCGE1003]
 gi|307587075|gb|ADN60472.1| deoxyxylulose-5-phosphate synthase [Burkholderia sp. CCGE1003]
          Length = 635

 Score =  457 bits (1176), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 275/641 (42%), Positives = 377/641 (58%), Gaps = 46/641 (7%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L  +++P  L+ L  ++L+ LA E+R+ +   VS+T   L S+L  VELT+ALH+VF  
Sbjct: 4   LLKTIDDPAALRRLDRRQLQPLADELRAFVLDSVSQTGGHLSSNLGTVELTIALHYVFDT 63

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+I+WDVG QTY HKILTGRR  +HTLR+  GISG+  R ESEYD F   H   S+SA
Sbjct: 64  PHDRIVWDVGHQTYPHKILTGRRDKMHTLRQLGGISGFPKRDESEYDTFGTAHSSTSISA 123

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDS-NMIVILNDSRHSLHPK 259
            LGMA+A  ++G     + VI +G   AG A+EAM+NAG  D   ++VILND+  S+ P 
Sbjct: 124 ALGMAIASKLQGDNRMGIAVIGDGAMTAGMAFEAMNNAGVEDDVPLLVILNDNDMSISP- 182

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                   + AL+  L+R+ S + +   R   + +  R+   M + A K++E+A+GMI P
Sbjct: 183 -------PVGALNRHLARLMSGRFYAAARAGVERVL-RVAPPMLDLARKLEEHAKGMIVP 234

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             +TLFEE G  YIGP+DGH+++ LI  LQ +  L   GP  +HVVT   ++ +  + +E
Sbjct: 235 --ATLFEEFGFNYIGPIDGHDLDSLIPTLQNIKEL--RGPQFLHVVT---KKGQGYKLAE 287

Query: 380 AIEKQQEGASDSNSL-----PFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
           A      G    N             +TY   F E L   AE D  +V +   M     +
Sbjct: 288 ADPVLYHGPGKFNPAEGIKPAVSPSKKTYTQVFGEWLCDAAELDARVVGITPAMREGSGM 347

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F+++FP+RYFDVG+AEQHAVTF+ GLA  G+KP   I S FLQRAYDQ+++DV  Q L
Sbjct: 348 VEFEKRFPDRYFDVGIAEQHAVTFAGGLAAEGMKPVVAIYSTFLQRAYDQLIHDVALQNL 407

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PV F I  AGLVG+DG T  GA+D+ F+ C+PNM+VMA SDE+E   M+ T A     P 
Sbjct: 408 PVVFAIDRAGLVGADGATHAGAYDLAFLRCIPNMMVMAASDENECRQMLYT-ALQQSCPT 466

Query: 555 CFRYPRGAIVRTDLPGYRGI-PIEIGKGKVLVE-----GKDVALLGYGAMVQNCLKARAL 608
             RYPRGA   T +   + +  + IGKG+V  E     GK +A+L +G MV   L A   
Sbjct: 467 AVRYPRGA--GTGVATVKQMAALPIGKGEVRRETSQPAGKRIAILAFGTMVAPSLAAAEE 524

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLL 667
           L     D TVA+ RF KPLD  LVR L + H  ++TVEEG + GG GS       ++ LL
Sbjct: 525 L-----DATVANMRFVKPLDADLVRRLAETHDAIVTVEEGCVMGGAGS-----ACVEALL 574

Query: 668 DSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAAT 705
           +SGV  RP++   LPD +I+H  P + LA  GL    IA +
Sbjct: 575 ESGV-MRPVLQLGLPDRFIDHGDPAKLLAACGLDAAGIAKS 614


>gi|193213336|ref|YP_001999289.1| 1-deoxy-D-xylulose-5-phosphate synthase [Chlorobaculum parvum NCIB
           8327]
 gi|193086813|gb|ACF12089.1| deoxyxylulose-5-phosphate synthase [Chlorobaculum parvum NCIB 8327]
          Length = 642

 Score =  457 bits (1176), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 255/633 (40%), Positives = 364/633 (57%), Gaps = 26/633 (4%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L  + +P  LK L+I +L+Q+A E R ++  +VS+      SSL  VELTVALHHV+ +
Sbjct: 15  LLSTIHDPADLKKLSISQLEQVAAECRRKVIELVSQHGGHFASSLGVVELTVALHHVYQS 74

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+ +WDVG Q Y HK+LTGR   + T R+ +G++G+  RSES +D F+ GH   S+SA
Sbjct: 75  PTDRFIWDVGHQAYVHKMLTGRLEQMDTNRRYNGLAGFPKRSESAHDAFDTGHASTSISA 134

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKI 260
             GMAVARD+ G+ E +V +I +G+   G A+EAM++ G + S+++VILND++ ++ P  
Sbjct: 135 AAGMAVARDLAGRSEKVVAIIGDGSLTGGMAFEAMNHLGDVKSDVLVILNDNQMAISP-- 192

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKG----MTKRIGRGMHEWAAKVDEYARGM 316
                 S   L++ L  +  +K++ +LR+        M   IG        ++++  +  
Sbjct: 193 ------STGGLNNYLVNLPLNKTYNKLRKFVWDSISLMHNDIGETAKTAVHRLEDGIKAA 246

Query: 317 IGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQ 376
             P     FE LG  Y GP+DGHN+E L   L E+ SL    P L+HV+T++ +  +  +
Sbjct: 247 FTP--GAYFEALGFRYFGPIDGHNMEQLTKALSEMRSLPH--PKLLHVITKKGKGFKPAE 302

Query: 377 KSEAIEKQQEGASDSNS-----LPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMD 431
           +++       G  D  +      P       Y + F EALV  A KD+ I  + A M   
Sbjct: 303 ENQPKWHASAGGFDIETGANLKAPGKPAKPKYQEVFGEALVELALKDQTITAITAAMPSG 362

Query: 432 LSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQ 491
            SL LFQ+  P R+FDVG+AEQHAVTF AGLA GG KP C I S FLQR YDQ+++DV  
Sbjct: 363 TSLDLFQQAIPSRFFDVGIAEQHAVTFCAGLALGGFKPVCAIYSTFLQRGYDQLIHDVAL 422

Query: 492 QRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDD 551
           Q L V F I  AGLVG DGPT  GAFD+++++ +PN+ +MAP DE EL DM+ T      
Sbjct: 423 QNLHVVFAIDRAGLVGEDGPTHHGAFDLSYLNAVPNLTIMAPGDEQELRDMLYTALYEVK 482

Query: 552 RPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSK 611
            PV  RYPRG      L      PI +GKG+VL EG  VALLG G+M Q  L+   LL K
Sbjct: 483 GPVAIRYPRGTGTGATLH-KEFTPIPVGKGRVLREGDTVALLGIGSMSQRALETAELLEK 541

Query: 612 LGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-IGGFGSHVSHFIALDGLLDSG 670
            G++  V D RF KPLD +++         ++T+EE S IGGFGS V+ +++       G
Sbjct: 542 AGLNPLVCDMRFLKPLDTEMIDMAAAKCKHIVTIEENSIIGGFGSSVTSYLS---HAHPG 598

Query: 671 VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIA 703
           +K     LPD+++ H S  +     GL    +A
Sbjct: 599 MKSISFGLPDDFVTHGSMQELYKEVGLDAETLA 631


>gi|330821214|ref|YP_004350076.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia gladioli
           BSR3]
 gi|327373209|gb|AEA64564.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia gladioli
           BSR3]
          Length = 634

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 277/643 (43%), Positives = 380/643 (59%), Gaps = 50/643 (7%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L  +++P  L+ L  ++L+ LA E+R+ +   VSKT   L S+L  VELT+ALH+VF+ 
Sbjct: 4   LLKTIDDPADLRRLDRRQLQPLADELRAFVLDSVSKTGGHLSSNLGTVELTLALHYVFNT 63

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+I+WDVG QTY HKILTGRR  + +LR+ DGISG+  RSES YD F   H   S+SA
Sbjct: 64  PNDRIVWDVGHQTYPHKILTGRRDQMSSLRQFDGISGFPRRSESVYDTFGTAHSSTSISA 123

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPK 259
            LGMA+A  + G     + VI +G   AG A+EAM+NAG   D+ ++VILND+  S+ P 
Sbjct: 124 ALGMALASQLNGDDRFSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDNDMSISP- 182

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTK--RIGRGMHEWAAKVDEYARGMI 317
                   + AL+  L+R+ S + +   R    G+ K   +   + E A K++E+A+GM+
Sbjct: 183 -------PVGALNRHLARLMSGRFYAAAR---AGVEKVLSVAPPVLELARKLEEHAKGMV 232

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQK 377
            P  +TLFEE G  YIGP+DGH+++ LI  LQ +  L   GP  +HVVT   ++ +  + 
Sbjct: 233 VP--ATLFEEFGFNYIGPIDGHDLDSLIPTLQNIKEL--RGPQFLHVVT---KKGQGYKL 285

Query: 378 SEAIEKQQEGASDSNSLPFGNYS-----RTYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
           +EA      G    N       S     +TY   F E L   AE D  +V +   M    
Sbjct: 286 AEADPVLYHGPGKFNPAEGIKPSTTPAKKTYTQVFGEWLCDMAELDARVVGITPAMREGS 345

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            +  F+++F +RY+DVG+AEQHAVTF+ G+A  GLKP   I S FLQRAYDQ+++DV  Q
Sbjct: 346 GMVEFEKRFKDRYYDVGIAEQHAVTFAGGMATEGLKPVVAIYSTFLQRAYDQLIHDVALQ 405

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
            LPV F I  AGLVG+DG T  GA+D+ F+ C+PNM VMA SDEDE   M+ T A     
Sbjct: 406 NLPVVFAIDRAGLVGADGATHAGAYDLAFLRCIPNMTVMAASDEDECRQMLYT-AVQQPN 464

Query: 553 PVCFRYPRGAIVRTDLPGYRGI-PIEIGKGKVL-----VEGKDVALLGYGAMVQNCLKAR 606
           P   RYPRGA     +P  + +  I +GKG+V       EGK VA+L +G MV   L A 
Sbjct: 465 PTAVRYPRGA--GAGVPTVKAMTAIPVGKGEVRRRSAQPEGKRVAILAFGTMVAPSLAAA 522

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG 665
             L     D TVA+ RF KP+D +LVREL Q H +L+TVEEG I GG GS       ++ 
Sbjct: 523 EEL-----DATVANMRFVKPIDAELVRELAQTHDYLVTVEEGCIQGGAGS-----ACVEA 572

Query: 666 LLDSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAAT 705
           L++ GV  RP++   LPD +I+H  P + L+L GL    IA +
Sbjct: 573 LMEGGV-IRPVLQLGLPDRFIDHGDPAKLLSLCGLDAAGIAKS 614


>gi|319761831|ref|YP_004125768.1| deoxyxylulose-5-phosphate synthase [Alicycliphilus denitrificans
           BC]
 gi|330826309|ref|YP_004389612.1| deoxyxylulose-5-phosphate synthase [Alicycliphilus denitrificans
           K601]
 gi|317116392|gb|ADU98880.1| deoxyxylulose-5-phosphate synthase [Alicycliphilus denitrificans
           BC]
 gi|329311681|gb|AEB86096.1| deoxyxylulose-5-phosphate synthase [Alicycliphilus denitrificans
           K601]
          Length = 630

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 263/626 (42%), Positives = 376/626 (60%), Gaps = 36/626 (5%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+L+ V +P  L+ L+  ELK LA E+R+ +   VSKT   L S+L  VELTVALH VF 
Sbjct: 7   PLLERVNDPADLRRLSRAELKSLAGELRAFVLESVSKTGGHLSSNLGTVELTVALHAVFD 66

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG QTY HKILTGRR  + TLR+  G+SG+  R+ESEYD F   H   S+S
Sbjct: 67  TPRDRLVWDVGHQTYPHKILTGRRERMGTLRQLGGLSGFPQRAESEYDTFGTAHSSTSIS 126

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           A LGMA+A   KG+    + VI +G   AG A+EA++NAG  D++++VILND+  S+ P 
Sbjct: 127 AALGMALAAKQKGEDRRAIAVIGDGAMTAGMAFEALNNAGVADADLLVILNDNDMSISP- 185

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                   + AL+  L+++ S + + + R+V K +  R    + E A ++++ A+GM+ P
Sbjct: 186 -------PVGALNRYLAQLMSGQFYAKARDVGKSVL-RNAPPLLELAKRLEQQAKGMVVP 237

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             +TLFE+ G  YIGP+DGH+++ LI  L+ + SL   GP  +HVVT++  +     +++
Sbjct: 238 --ATLFEKFGFNYIGPIDGHDLDSLIPTLENIRSL--KGPQFLHVVTKKG-QGYKLAEAD 292

Query: 380 AIEKQQEGASDSN---SLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQL 436
            +     G  D       P     +T+   F + L   A KD+ +V +   M     +  
Sbjct: 293 PVAYHGPGKFDPRVGLVKPATPPKQTFTQVFGQWLCDMAAKDQRLVGITPAMREGSGMVE 352

Query: 437 FQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPV 496
           F ++FP RY+DVG+AEQHAVTF+AG+AC G+KP   I S FLQRAYDQ+++DV  Q LPV
Sbjct: 353 FHQRFPGRYYDVGIAEQHAVTFAAGMACEGVKPVVAIYSTFLQRAYDQLIHDVALQNLPV 412

Query: 497 RFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCF 556
            F +  AGLVG+DG T  GA+DI F+ C+P+M +  P+DE E   ++ T A   D PV  
Sbjct: 413 VFALDRAGLVGADGATHAGAYDIAFVRCIPHMSMACPADERECRQLL-TTAYEQDHPVAV 471

Query: 557 RYPRGAIVR-TDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGID 615
           RYPRGA V    L G  G+P   GKG+V  +G+ +A+L +G ++   L+A   L     D
Sbjct: 472 RYPRGAGVGVAPLAGLEGLP--FGKGEVRRQGRRIAILAFGTLLYPALQAAEKL-----D 524

Query: 616 VTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVKWR 674
            TV + R+ KPLD +L+  +   H  L+TVEEG I GG GS V   +   G+L      R
Sbjct: 525 ATVVNMRWAKPLDTELLLRVAAEHEALVTVEEGCIMGGAGSAVGEALNAAGVL------R 578

Query: 675 PIV---LPDNYIEHASPTQQLALAGL 697
           P++   LPD +IEH  P + LAL GL
Sbjct: 579 PLLQLGLPDAFIEHGDPARLLALQGL 604


>gi|354567520|ref|ZP_08986689.1| 1-deoxy-D-xylulose-5-phosphate synthase [Fischerella sp. JSC-11]
 gi|353542792|gb|EHC12253.1| 1-deoxy-D-xylulose-5-phosphate synthase [Fischerella sp. JSC-11]
          Length = 635

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 259/640 (40%), Positives = 373/640 (58%), Gaps = 31/640 (4%)

Query: 82  LDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAP 141
           L  + +P +L  L+I++L+Q+A +IR +    V+ T   L   L  VELT+ L+      
Sbjct: 3   LSEITHPNQLHGLSIRQLQQIARQIRDKHLQTVAATGGHLGPGLGVVELTLGLYQTLDLD 62

Query: 142 VDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAG 201
            DK++WDVG Q Y HK++TGR S  HTLR+KDGI+GY  RSES +D F AGH   S+SA 
Sbjct: 63  RDKVIWDVGHQAYPHKLITGRYSNFHTLRQKDGIAGYLKRSESRFDHFGAGHASTSISAA 122

Query: 202 LGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPKI 260
           LGMA+ARD KG++  +V +I +G    G A EA+++AG+L  +N++V+LND+  S+ P +
Sbjct: 123 LGMALARDAKGEKFKVVAIIGDGALTGGMALEAINHAGHLPKTNLLVVLNDNEMSISPNV 182

Query: 261 EESPK-TSINALSSTLSRIQSS--KSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMI 317
              P+  +   LS  +   + S  + F+Q+  V + ++  +GR        + E  + + 
Sbjct: 183 GAIPRYLNKMRLSGPVQFFKDSFEEQFKQIPFVGESLSPELGR--------IKEGMKRLA 234

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQK 377
            P+   +FEELG  Y+GPVDGHN+E+LI+  Q+   +   GPVLVHV T + +  E  ++
Sbjct: 235 VPKVGAVFEELGFTYMGPVDGHNLEELIATFQQAHQI--TGPVLVHVATIKGKGYEIAEQ 292

Query: 378 SEAIEKQQE------GASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMD 431
            +     Q       G +  +S P       Y   F   LV  AE++  I+ + A M   
Sbjct: 293 DQVGYHAQSPFNLTTGKAIPSSKP---KPPAYSKVFAHTLVKLAEQNPKIIGITAAMATG 349

Query: 432 LSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQ 491
             L   Q K P +Y DVG+AEQHAVT +AGLA  G++P   I S FLQRAYDQ+++DV  
Sbjct: 350 TGLDKLQAKLPNQYIDVGIAEQHAVTLAAGLAAEGMRPVAAIYSTFLQRAYDQIIHDVCI 409

Query: 492 QRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDD 551
           Q LPV F +  AG+VG+DGPT  G +DI ++ C+PNM++MAP DE EL  MV T  +   
Sbjct: 410 QNLPVFFCMDRAGIVGADGPTHQGMYDIAYLRCIPNMVLMAPKDEAELQRMVVTGVNHTT 469

Query: 552 RPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSK 611
            P+  R+PRG      L      P+EIGK ++L  G D+ +LGYG MV   ++   +LS+
Sbjct: 470 GPIAMRFPRGNGYGVPLMEEGWEPLEIGKAEILRHGDDLLILGYGTMVHPAMQVAEILSE 529

Query: 612 LGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSG 670
            GI+ TV +ARF KPLD +L+  L Q    ++T+EEG + GGFGS V+     + LLD+ 
Sbjct: 530 HGIETTVINARFAKPLDTELIFPLAQKIGRVVTLEEGCVMGGFGSAVA-----EALLDAD 584

Query: 671 --VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALS 708
             V  + I +PD  +EHA P Q  A  GLT   IA   L 
Sbjct: 585 IVVPIKRIGVPDVLVEHAEPNQSKAELGLTSPQIAEKVLQ 624


>gi|34498147|ref|NP_902362.1| 1-deoxy-D-xylulose-5-phosphate synthase [Chromobacterium violaceum
           ATCC 12472]
 gi|41016944|sp|Q7NUK5.1|DXS_CHRVO RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|34104002|gb|AAQ60362.1| 1-deoxy-D-xylulose 5-phosphate synthase [Chromobacterium violaceum
           ATCC 12472]
          Length = 616

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 261/625 (41%), Positives = 373/625 (59%), Gaps = 33/625 (5%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+L+ + +P  L+ L   +L QLA E+R  L   VSKT     S+L ++ELT+ALH+VF 
Sbjct: 3   PLLENINSPADLRLLPRTQLPQLAGELREFLVESVSKTGGHFASNLGSIELTIALHYVFD 62

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG QTY HKILTGRR  +HT+R+ +G++G+  R ESEYD F  GH   S+ 
Sbjct: 63  TPHDRLVWDVGHQTYPHKILTGRRERMHTMRQHNGLAGFPKREESEYDTFGVGHSSTSIG 122

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           A LGMAVA    G     V +I +G   AGQA+EA++NAG +D++++VILND+  S+ P 
Sbjct: 123 AALGMAVAAKTLGVDRKSVAIIGDGAMTAGQAFEALNNAGAMDTDLLVILNDNDMSISP- 181

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRG--MHEWAAKVDEYARGMI 317
                  ++ AL++ L+++ S + +  +RE   G +K +G    + E A+KV+E+ +G  
Sbjct: 182 -------NVGALNNYLAKLMSGRFYAAMRE---GSSKVLGIAPPLKEIASKVEEHVKGFF 231

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR----RAE 373
            P   TLFEE G  YIGP+DGH+++ L+  L+ + SL   GP  +H+VT++ +       
Sbjct: 232 TP--GTLFEEFGFNYIGPIDGHDVDVLVDTLKNIRSL--KGPQFLHIVTKKGQGYKLAEN 287

Query: 374 DTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
           D  K   + K  + A+   S   G     Y   F + L   A+ DK +V +   M     
Sbjct: 288 DPVKYHGVTK-FDPANGLASGKGGAGKPQYTQVFGDWLCDMAKLDKRLVGITPAMREGSG 346

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           +  F+++ P+RY+DV +AEQHAVTF+ G+AC GLKP   I S FLQR YDQ+++DV  Q 
Sbjct: 347 MVRFEKEHPDRYYDVAIAEQHAVTFAGGMACDGLKPVVAIYSTFLQRGYDQLIHDVALQN 406

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPV F +  AGLVG+DGPT  GAFD++++ C+PNM VMAPSDE+E   ++ T   + D P
Sbjct: 407 LPVMFALDRAGLVGADGPTHAGAFDLSYLRCIPNMTVMAPSDENECRQLLYTAFQL-DTP 465

Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
              RYPRG     ++   +   + IGKG V   GK VA+L +G+MV   L A   L    
Sbjct: 466 TAVRYPRGTGPGAEIQ-QQMAALPIGKGVVRRRGKQVAILAFGSMVHPALAAAEALDA-- 522

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVK 672
              TVAD RF KPLD +L+R+L Q H  ++TVEE  + GG GS     +   GL    V 
Sbjct: 523 ---TVADMRFVKPLDAELIRKLAQTHELIVTVEENVVMGGAGSGCGEALQAMGL---AVP 576

Query: 673 WRPIVLPDNYIEHASPTQQLALAGL 697
              + LPD+Y+EH  P   L+L GL
Sbjct: 577 TLHLGLPDDYVEHGDPALLLSLCGL 601


>gi|427731634|ref|YP_007077871.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nostoc sp. PCC 7524]
 gi|427367553|gb|AFY50274.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nostoc sp. PCC 7524]
          Length = 635

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 257/640 (40%), Positives = 378/640 (59%), Gaps = 31/640 (4%)

Query: 82  LDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAP 141
           L  + +P +L  L+I++L+Q+A +IR +    V+ T   L   L  VELT+ L+      
Sbjct: 3   LSEITHPNQLHGLSIRQLQQIARQIRDKHLQTVAATGGHLGPGLGVVELTLGLYQTLDLD 62

Query: 142 VDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAG 201
            DK++WDVG Q Y HK++TGR S  HTLR+KDG++GY  R E+++D F AGH   S+SA 
Sbjct: 63  RDKVIWDVGHQAYPHKLITGRYSDFHTLRQKDGVAGYLKRCENQFDHFGAGHASTSISAA 122

Query: 202 LGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPKI 260
           LGMA+ARD+ G++  +  VI +G    G A EA+++AG+L  +N++V+LND+  S+ P +
Sbjct: 123 LGMALARDMNGEKFKVAAVIGDGALTGGMALEAINHAGHLPKTNLLVVLNDNEMSISPNV 182

Query: 261 EESPK-TSINALSSTLSRIQSS--KSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMI 317
              P+  +   LS  +  I+ +  + F+ +  V + ++  +GR        + E  + + 
Sbjct: 183 GAIPRYLNKMRLSPPVQFIKDNFEEQFKHIPFVGESLSPELGR--------IKEGMKRLA 234

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQK 377
            P+   +FEELG  Y+GPVDGHN+E+LI+  Q+   +   GPVLVHVVT + +  E  +K
Sbjct: 235 VPKVGAVFEELGFTYMGPVDGHNLEELITTFQQAHQIA--GPVLVHVVTVKGKGYEIAEK 292

Query: 378 SEAIEKQQE------GASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMD 431
            +     Q       G +  +S P       Y   F   LV  AE++  I+ + A M   
Sbjct: 293 DQVGYHAQNPFNLTTGKAIPSSKP---KPPAYAKVFSHTLVKLAEQNPKIIGITAAMATG 349

Query: 432 LSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQ 491
             L   Q K P +Y DVG+AEQHAVT +AGLAC G++P   I S FLQRAYDQ+++DV  
Sbjct: 350 TGLDKLQAKLPNQYIDVGIAEQHAVTLAAGLACEGMRPVAAIYSTFLQRAYDQIIHDVCI 409

Query: 492 QRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDD 551
           Q LPV F +  AG+VG+DGPT  G +DI ++ C+PNM++MAP DE EL  M+ T  +   
Sbjct: 410 QNLPVFFCLDRAGIVGADGPTHQGMYDIAYLRCIPNMVLMAPKDEAELQRMIVTGINHTS 469

Query: 552 RPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSK 611
            P+  R+PRG      L      P+EIGKG++L  G DV ++GYG MV   L+A  +LS+
Sbjct: 470 SPIAMRFPRGNGYGVPLMEEGWEPLEIGKGEILRNGDDVLIVGYGTMVYPSLQAAEILSE 529

Query: 612 LGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSG 670
            GI+ TV +ARF KPLD +L+  L +    ++T+EEG + GGFGS V+     + LLD+ 
Sbjct: 530 HGIEATVINARFVKPLDTELIVPLAKKIGRVVTLEEGCVMGGFGSAVA-----EALLDAD 584

Query: 671 --VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALS 708
             V  + I +PD  +EHA+P +  A  GLT   IA   L+
Sbjct: 585 VVVPVKRIGIPDVLVEHATPDESKAELGLTSRQIAERVLA 624


>gi|91777310|ref|YP_552518.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia xenovorans
           LB400]
 gi|118595499|sp|Q13RX1.1|DXS_BURXL RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|91689970|gb|ABE33168.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia xenovorans
           LB400]
          Length = 635

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 274/633 (43%), Positives = 375/633 (59%), Gaps = 46/633 (7%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L  +++P  L+ L  ++L+ LA E+R+ +   VS+T   L S+L  VELT+ALH+VF  
Sbjct: 4   LLKTIDDPAALRRLDRRQLQPLADELRAFVLDSVSQTGGHLSSNLGTVELTIALHYVFDT 63

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+I+WDVG QTY HKILTGRR  +HTLR+  GISG+  R ESEYD F   H   S+SA
Sbjct: 64  PHDRIVWDVGHQTYPHKILTGRRDQMHTLRQLGGISGFPKRDESEYDTFGTAHSSTSISA 123

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDS-NMIVILNDSRHSLHPK 259
            LGMAVA  +KG     + VI +G   AG A+EAM+NAG  D   ++VILND+  S+ P 
Sbjct: 124 ALGMAVASKLKGDNRMGIAVIGDGAMTAGMAFEAMNNAGVEDDVPLLVILNDNDMSISP- 182

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                   + AL+  L+R+ S + +   R   + +  R+   M + A K++E+A+GMI P
Sbjct: 183 -------PVGALNRHLARLMSGRFYAAARAGVERVL-RVAPPMLDLARKLEEHAKGMIVP 234

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             +TLFEE G  YIGP+DGH+++ LI  LQ +  L   GP  +HVVT   ++ +  + +E
Sbjct: 235 --ATLFEEFGFNYIGPIDGHDLDSLIPTLQNIKEL--RGPQFLHVVT---KKGQGYKLAE 287

Query: 380 AIEKQQEGASDSNSL----PFGNYS-RTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
           A      G    N      P    S +TY   F E L   AE D  ++ +   M     +
Sbjct: 288 ADPVLYHGPGKFNPAEGIKPAATPSKKTYTQVFGEWLCDAAELDARVIGITPAMREGSGM 347

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F+++FP+RYFDVG+AEQHAVTF+ GLA  G+KP   I S FLQRAYDQ+++DV  Q L
Sbjct: 348 VEFEKRFPDRYFDVGIAEQHAVTFAGGLAAEGMKPVVAIYSTFLQRAYDQLIHDVALQNL 407

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PV F I  AGLVG+DG T  GA+D+ F+ C+PNM VMA SDE+E   M+ T A     P 
Sbjct: 408 PVVFAIDRAGLVGADGATHAGAYDLAFLRCIPNMTVMAASDENECRQMLYT-ALQQPNPT 466

Query: 555 CFRYPRGAIVRTDLPGYRGI-PIEIGKGKVLVE-----GKDVALLGYGAMVQNCLKARAL 608
             RYPRGA   T +   + +  + +GKG++  E     GK +A+L +G MV   L A   
Sbjct: 467 AVRYPRGA--GTGVATIKQMTALPLGKGEIRRETSQPAGKRIAILAFGTMVAPSLAAAEQ 524

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLL 667
           L     D TVA+ RF KPLD  LVR+L + H  ++TVEEG + GG GS       ++ LL
Sbjct: 525 L-----DATVANMRFVKPLDADLVRQLAETHDAIVTVEEGCVMGGAGS-----ACVEALL 574

Query: 668 DSGVKWRPIV---LPDNYIEHASPTQQLALAGL 697
            SGV  RP++   LPD +I+H  P + LA  GL
Sbjct: 575 ASGVT-RPVLQLGLPDRFIDHGDPAKLLAACGL 606


>gi|298245142|ref|ZP_06968948.1| deoxyxylulose-5-phosphate synthase [Ktedonobacter racemifer DSM
           44963]
 gi|297552623|gb|EFH86488.1| deoxyxylulose-5-phosphate synthase [Ktedonobacter racemifer DSM
           44963]
          Length = 645

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 258/654 (39%), Positives = 385/654 (58%), Gaps = 26/654 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           T ILD +++P +L++LT+ +++QLA EIR E+   VS     +  +L  VELT+ALH VF
Sbjct: 2   TSILDTIDSPEQLRALTVPQMEQLAGEIRKEIIEKVSVRGGHIAPNLGVVELTMALHRVF 61

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D ++WD+G Q Y HK+LTGRR   HT+R+  G+SGY  R ES YD F A H   S+
Sbjct: 62  NTPNDLLVWDIGHQAYVHKLLTGRRERFHTIRQFGGLSGYLRRDESPYDTFGASHASTSI 121

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LGMA ARD+KG+   +V +I +G    G A EA++NAG +  N+I++LND+  S+  
Sbjct: 122 SAALGMAAARDLKGEDTKVVAIIGDGALTGGMALEAINNAGSMKKNLIIVLNDNDKSISD 181

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKR---IGRGMHEWAAKVD-EYAR 314
            +      +++   S + ++Q++ S+++LR++AKG  +R   +G    E A + +  + +
Sbjct: 182 NV-----GALHQYLSQVRKVQTTPSYQRLRDMAKGSIERFPVLGDKAREAAGRAETSFKQ 236

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAED 374
            ++  +   +FEELG+ + GP DGH+I  ++ V + V  +   GPV+V VVT++ +  E 
Sbjct: 237 FVMHSKSGAIFEELGIKFFGPFDGHDIPSMLDVFENVKHI--EGPVMVQVVTKKGKGWE- 293

Query: 375 TQKSEAIEKQQEGASDSNSLPFGNYSR---TYDDCFIEALVMEAEKDKDIVVVHAGMEMD 431
             +S++ +    GA D  +      +    TY + F   LV  AEKD  +V + A M   
Sbjct: 294 VAESDSTKWHGPGAYDYKTGIIKKNAGDPPTYTEVFANTLVEIAEKDPSVVGITAAMAEG 353

Query: 432 LSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQ 491
             L+   ++FPERYFDVG+AEQHAVTF+AG+A  G+KP   I S F+QRA+DQV++DV  
Sbjct: 354 TGLKKMHQRFPERYFDVGIAEQHAVTFAAGMATLGIKPVIAIYSTFMQRAFDQVMHDVCV 413

Query: 492 QRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDD 551
           Q L V F +  AG+VG DG TQ G FD  FM  LP+M VMAP DE+EL  M+ T   +D 
Sbjct: 414 QDLHVVFAMDRAGIVGEDGQTQHGVFDTAFMRILPHMKVMAPKDEEELRHMLYTAVYLDG 473

Query: 552 RPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVL-------VEGKDVALLGYGAMVQNCLK 604
            PV  RYPRG  +  ++     + +E+GK ++L        E  D A+L YG+ V     
Sbjct: 474 -PVALRYPRGKALGIEMSDELHM-LEVGKAELLSPATLEEAERTDCAILAYGSTVAQAEI 531

Query: 605 ARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIAL 663
           A   L++ GI  T+ +AR+ KPLD +L   L +    ++T+E+  + GGFGS V      
Sbjct: 532 AAKELAQEGIKATIVNARWAKPLDEELFLHLAKTTRRIVTIEDHVLAGGFGSAVLELFEQ 591

Query: 664 DGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREAL 717
            GLL   ++ R I LPD Y+EH +PT    L GL+  H+      +LG  +  L
Sbjct: 592 HGLLRD-IETRLIALPDKYVEHGAPTILKELYGLSSAHLKEVVREMLGTQQHTL 644


>gi|73540585|ref|YP_295105.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ralstonia eutropha JMP134]
 gi|118595607|sp|Q474C2.1|DXS_RALEJ RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|72117998|gb|AAZ60261.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ralstonia eutropha JMP134]
          Length = 638

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 264/637 (41%), Positives = 379/637 (59%), Gaps = 50/637 (7%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L  ++ P  L+ L  +EL+ LA E+R+ +   VS+T   L S+L  VELT+ALH+VFH 
Sbjct: 5   LLKKIDAPADLRKLDRRELRTLADELRAYVLESVSQTGGHLSSNLGTVELTIALHYVFHT 64

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+++WDVG Q+Y HKILTGRR  ++TLR+  GISG+  RSES+YD F   H   S+SA
Sbjct: 65  PDDRVVWDVGHQSYPHKILTGRRERMNTLRQFGGISGFPRRSESQYDTFGTAHSSTSISA 124

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAG-YLDSNMIVILNDSRHSLHPK 259
            LGMA+     G++   + VI +G   AG A+EA++NAG Y D  ++V+LND+  S+ P 
Sbjct: 125 ALGMALGARTLGEQRVSIAVIGDGAMTAGMAFEALNNAGVYKDLPLVVVLNDNDMSISP- 183

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTK--RIGRGMHEWAAKVDEYARGMI 317
                   + AL+  L+R+ S + +   +   KG+ K   +   + E+A + +E+A+GM+
Sbjct: 184 -------PVGALNKHLARLLSGQFYAATK---KGIEKVLSVAPPVLEFAKRFEEHAKGMM 233

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEV--ASLGSMGPVLVHVVTEENRRAEDT 375
            P  +TLFEE G  YIGP+DGH+++ L+  LQ +   +L   GP  +HVVT   ++ +  
Sbjct: 234 VP--ATLFEEFGFNYIGPIDGHDLDSLVPTLQNIRKRALEGAGPQFLHVVT---KKGQGY 288

Query: 376 QKSEAIEKQQEGASDSNSL----PFGNYSR-TYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
           + +EA      G    N      P    +R TY   F E L   A  DK ++ +   M  
Sbjct: 289 KLAEADPILYHGPGKFNPAEGIRPAAKPARKTYTQVFGEWLCDMAAADKRLIGITPAMRE 348

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              +  F+++FPERY+DVG+AEQHAVTF+ G+AC GLKP   I S FLQR YDQ+++DV 
Sbjct: 349 GSGMVEFEKRFPERYYDVGIAEQHAVTFAGGMACEGLKPIVAIYSTFLQRGYDQLIHDVA 408

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q LPV F +  AGLVG+DG T  GA+DI ++ C+PNM+VM PSDE+E   ++ T A   
Sbjct: 409 LQNLPVVFALDRAGLVGADGATHAGAYDIAYLRCIPNMMVMTPSDENECRQLL-TTAFHQ 467

Query: 551 DRPVCFRYPRGA-------IVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCL 603
           + P   RYPRGA        V  D+P  +G+    G  +    G+ VA LG+G+MV   L
Sbjct: 468 NCPTAVRYPRGAGQGVATEAVLKDVPVGKGVMRRTGGAR---SGQRVAFLGFGSMVHPAL 524

Query: 604 KARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIA 662
            A   L     D +VAD RF KPLD++LV+ L + H +L+TVEEGS+ GG GS V     
Sbjct: 525 GAAQAL-----DASVADMRFVKPLDVELVKRLAEEHNYLVTVEEGSVMGGAGSAV----- 574

Query: 663 LDGLLDSGVKWRPIV--LPDNYIEHASPTQQLALAGL 697
           L+ L ++G+    +V  LPD +I+H  P   L+  GL
Sbjct: 575 LEALAEAGIDIPVLVLGLPDRFIDHGDPALLLSQCGL 611


>gi|416995850|ref|ZP_11939109.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia sp. TJI49]
 gi|325518121|gb|EGC97907.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia sp. TJI49]
          Length = 634

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 276/647 (42%), Positives = 381/647 (58%), Gaps = 58/647 (8%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L  +++P  L+ L  ++L+ LA E+R+ +   VSKT   L S+L  VELT+ALH+VF+ 
Sbjct: 4   LLKTIDDPADLRRLDRRQLQPLADELRAFVLDSVSKTGGHLSSNLGTVELTIALHYVFNT 63

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+I+WDVG QTY HKILTGRR  + TLR+  GISG+  RSESEYD F   H   S+SA
Sbjct: 64  PNDRIVWDVGHQTYPHKILTGRRDEMPTLRQLGGISGFPRRSESEYDTFGTAHSSTSISA 123

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPK 259
            LGMA+   + G     + VI +G   AG A+EAM+NAG   D+ ++VILND+  S+ P 
Sbjct: 124 ALGMAIGSQLNGDDRFSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDNDMSISP- 182

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                   + AL+  L+R+ S + +   R   + +   +   + E A K++E+A+GM+ P
Sbjct: 183 -------PVGALNRHLARLMSGRFYAAARAGVERVLS-VAPPVLELARKLEEHAKGMVVP 234

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             +TLFEE G  YIGP+DGH+++ LI  LQ +  L   GP  +HVVT   ++ +  + +E
Sbjct: 235 --ATLFEEFGFNYIGPIDGHDLDSLIPTLQNIREL--RGPQFLHVVT---KKGQGYKLAE 287

Query: 380 AIEKQQEGASDSNSL----PFGNYS-RTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
           A      G    N      P    + +TY   F E L  EAE+D  +V +   M     +
Sbjct: 288 ADPVLYHGPGKFNPAEGIKPSATPAKKTYTQVFGEWLCDEAERDTRVVGITPAMREGSGM 347

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F+++F +RY+DVG+AEQHAVTF+ GLA  GLKP   I S FLQRAYDQ+++DV  Q L
Sbjct: 348 VEFEKRFKDRYYDVGIAEQHAVTFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNL 407

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PV F I  AGLVG+DG T  GA+D+ FM C+PNM +MA SDE+E   M+ T A     P 
Sbjct: 408 PVVFAIDRAGLVGADGATHAGAYDLAFMRCIPNMTIMAASDENECRQMLHT-ALQQPNPT 466

Query: 555 CFRYPRG-----AIVR--TDLPGYRGIPIEIGKGKVL-----VEGKDVALLGYGAMVQNC 602
             RYPRG     A V+  T+LP        IGKG+V       EGK +A+L +G MV   
Sbjct: 467 AVRYPRGAGTGVATVKEFTELP--------IGKGEVRRRTSQPEGKRIAILAFGTMVAPS 518

Query: 603 LKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFI 661
           L A   L     D TVA+ RF KP+D  LVREL + H +L+T EEG + GG GS      
Sbjct: 519 LAAAEEL-----DATVANMRFVKPVDAALVRELAETHDYLVTAEEGCVMGGAGS-----A 568

Query: 662 ALDGLLDSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAAT 705
            ++ L++SGV  RP++   LPD +I+H  P + L+  GL G  IA +
Sbjct: 569 CVEALMESGV-IRPVLQLGLPDQFIDHGDPAKLLSQCGLDGAGIAKS 614


>gi|345869245|ref|ZP_08821203.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thiorhodococcus drewsii
           AZ1]
 gi|343923168|gb|EGV33860.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thiorhodococcus drewsii
           AZ1]
          Length = 649

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 270/649 (41%), Positives = 387/649 (59%), Gaps = 55/649 (8%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+LD +++PL L++L+  +L ++A E+RS L   VS+T   L + L  VELT+ LH+VF 
Sbjct: 17  PLLDSIDSPLDLRALSESQLPEVASELRSFLIECVSQTGGHLAAGLGVVELTLGLHYVFD 76

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+I+WDVG Q Y HKILTGRR  + TLR+KDG+SG+  R ESEYD F  GH   S+S
Sbjct: 77  TPTDRIVWDVGHQAYPHKILTGRRDRMCTLRQKDGVSGFPKRCESEYDAFGVGHSSTSIS 136

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           A LGMA+A   KG+R  ++ VI +G   AG A+EA+++AG +D +++VILND+  S+ P 
Sbjct: 137 AALGMALAAKQKGERRTVIAVIGDGALSAGMAFEALNHAGSMDIDLVVILNDNEMSISPP 196

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAK----GMTKRIGRGMHEWAAKVDEYARG 315
                   + A+S+ L+R+ S K +  +RE +K    GM +     +     + +E+ +G
Sbjct: 197 --------VGAISNHLARLLSGKLYTSVREGSKTALAGMPQ-----LRHLVGRWEEHVKG 243

Query: 316 MIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDT 375
           M+ P  STLFEELG  YIGP+DGH++  +   L+ +   G  G  L+HVVT++ R  E  
Sbjct: 244 MLMP--STLFEELGFNYIGPIDGHDLGSVTRTLRNIK--GMPGQRLLHVVTQKGRGYE-- 297

Query: 376 QKSEAIEKQQEGASD----SNSLPFGNYSR-TYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
             +E       G +     +  L  G  +  TY   F   L   A++D  +V +   M  
Sbjct: 298 -PAEGQPTTYHGVTPFDRRTGELRKGKSNGPTYTQIFGGWLCDAADEDPRLVGITPAMCE 356

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L  F ++FP+RYFDVG+AEQHAVT +AG+AC GLKP   I S+FLQRAYDQ+++DV 
Sbjct: 357 GSGLTAFSKRFPDRYFDVGIAEQHAVTLAAGMACEGLKPVVAIYSSFLQRAYDQLIHDVA 416

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q L V F +   GLVG+DG T  G+FD++F   +PNM++MAPS+E+E   M+ T    +
Sbjct: 417 LQNLDVTFAVDRGGLVGADGATHAGSFDLSFTRPIPNMVIMAPSNENECRQMLKTAFEYE 476

Query: 551 DRPVCFRYPRGAIVRTDLPGYRGIPIE-------IGKGKVLVEGK-DVALLGYGAMVQNC 602
             P   RYPRG        G  GI I+       IG+G+++ +G   VALL +G+MV   
Sbjct: 477 G-PAMVRYPRG--------GGPGIAIDPKAPALPIGRGEIVRQGAGSVALLAFGSMVTPA 527

Query: 603 LKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFI 661
           LKA   L     + TVA+ RF KPLD+ L+++L   H  L+TVEE +I GG GS V+  +
Sbjct: 528 LKAAETL-----NATVANMRFVKPLDLDLIQKLADTHELLVTVEENTIAGGAGSAVAEAL 582

Query: 662 ALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
           A  GL    ++   + LPD+YI+HA   +QLA  GL    I A+  + L
Sbjct: 583 AGLGLTPRCIQ---LGLPDSYIDHAQHGEQLAACGLDAAGILASVQAQL 628


>gi|187921414|ref|YP_001890446.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia phytofirmans
           PsJN]
 gi|187719852|gb|ACD21075.1| deoxyxylulose-5-phosphate synthase [Burkholderia phytofirmans PsJN]
          Length = 653

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 272/633 (42%), Positives = 376/633 (59%), Gaps = 46/633 (7%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L  +++P  L+ L  ++L+ LA E+R+ +   VS+T   L S+L  VELT+ALH+VF  
Sbjct: 22  LLKTIDDPAALRRLDRRQLQPLADELRAFVLDSVSQTGGHLSSNLGTVELTIALHYVFDT 81

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+I+WDVG QTY HKILTGRR  +HTLR+  GISG+  R ESEYD F   H   S+SA
Sbjct: 82  PRDRIVWDVGHQTYPHKILTGRRDQMHTLRQLGGISGFPKRDESEYDTFGTAHSSTSISA 141

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDS-NMIVILNDSRHSLHPK 259
            LGMA+A  ++G     + VI +G   AG A+EAM+NAG  D   ++VILND+  S+ P 
Sbjct: 142 ALGMAIASKLQGDNRTGIAVIGDGAMTAGMAFEAMNNAGVEDDVPLLVILNDNDMSISP- 200

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                   + AL+  L+R+ S + +   R   + +  R+   M + A K++E+A+GMI P
Sbjct: 201 -------PVGALNRHLARLMSGRFYAAARAGVERVL-RVAPPMLDLARKLEEHAKGMIVP 252

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             +TLFEE G  YIGP+DGH+++ LI  LQ +  L   GP  +HVVT   ++ +  + +E
Sbjct: 253 --ATLFEEFGFNYIGPIDGHDLDSLIPTLQNIKEL--RGPQFLHVVT---KKGQGYKLAE 305

Query: 380 AIEKQQEGASDSNSL----PFGNYS-RTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
           A      G    N      P    S +TY   F E L   AE D  +V +   M     +
Sbjct: 306 ADPVLYHGPGKFNPAEGIKPATTPSKKTYTQVFGEWLCDAAELDARVVGITPAMREGSGM 365

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F+++FP+RYFDVG+AEQHAVTF+ GLA  G+KP   I S FLQRAYDQ+++DV  Q L
Sbjct: 366 VEFEKRFPDRYFDVGIAEQHAVTFAGGLAAEGMKPVVAIYSTFLQRAYDQLIHDVALQNL 425

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PV F I  AGLVG+DG T  GA+D+ F+ C+PNM VMA SDE+E   M+ T A     P 
Sbjct: 426 PVVFAIDRAGLVGADGATHAGAYDLAFLRCIPNMTVMAASDENECRQMLYT-ALQQPNPT 484

Query: 555 CFRYPRGAIVRTDLPGYRGI-PIEIGKGKVLVE-----GKDVALLGYGAMVQNCLKARAL 608
             RYPRGA   T +   + +  + +GKG++  E     GK +A+L +G MV   L A   
Sbjct: 485 AVRYPRGA--GTGVATVKQMAALPLGKGEIRRETSQPAGKRIAILAFGTMVAPSLAAAEQ 542

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLL 667
           L     D TVA+ RF KPLD  LVR+L + H  ++T+EEG + GG GS       ++ LL
Sbjct: 543 L-----DATVANMRFVKPLDAALVRQLAETHDAIVTIEEGCVMGGAGS-----ACVEALL 592

Query: 668 DSGVKWRPIV---LPDNYIEHASPTQQLALAGL 697
           +SGV  RP++   LPD +I+H  P + LA  GL
Sbjct: 593 ESGV-MRPVLQLGLPDRFIDHGDPAKLLAACGL 624


>gi|421074460|ref|ZP_15535492.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pelosinus fermentans
           JBW45]
 gi|392527501|gb|EIW50595.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pelosinus fermentans
           JBW45]
          Length = 627

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 263/649 (40%), Positives = 391/649 (60%), Gaps = 41/649 (6%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L+ ++ P  LK L+ +++K LA EIR  L   VSKT   L  +L  VELT+A+H VF++
Sbjct: 4   LLEAIDKPQDLKKLSHEQIKLLAEEIRHFLICSVSKTGGHLAPNLGVVELTLAIHKVFNS 63

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P+DKI+WDVG Q+Y HKILTGRR    TLR+  GISG+   SES +D F  GH   S+SA
Sbjct: 64  PIDKIVWDVGHQSYIHKILTGRRDGFATLRQFGGISGFPKISESVHDFFGTGHSSTSISA 123

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKI 260
            LGMA+ARDI G +E I+ VI +G+   GQAYEA+++AG+  +NMIVILND+        
Sbjct: 124 ALGMALARDIAGDKEHILAVIGDGSLTGGQAYEALNHAGHTGTNMIVILNDN-------- 175

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKR---IGRGMHEWAAKVDEYARGMI 317
           E S   ++ A+S  LS++++   + ++++  + + +R   IG  + +   +V +  R ++
Sbjct: 176 EMSIAKNVGAMSEYLSKMRTEPKYTKIKQDIEFLLRRIPAIGESVAKTVERVKDSLRYLL 235

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQK 377
            P    LFEELG  YIGP+DGHN E L  VL++   +   GP+L+HV+T    + +  + 
Sbjct: 236 VP--GVLFEELGFNYIGPIDGHNFELLSEVLEKAKKM--QGPILIHVLT---CKGKGYKP 288

Query: 378 SEAIEKQQEGAS----DSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
           +E    +  G      +S  +     + TY   F E L+  A++DK IV + A M     
Sbjct: 289 AECNPDKFHGVGPYCIESGEVIKNGNTPTYTAIFGETLLHLAKQDKRIVAITAAMPEGTG 348

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L+ F  +FP+R+FDVG+AEQ+AVT +AG+A  G++P   + S F QRAYDQ+++D+  Q+
Sbjct: 349 LKKFAAEFPKRFFDVGIAEQNAVTMAAGMATKGMRPVVALYSTFAQRAYDQILHDICLQK 408

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPV F +  AG+VG DGPT  G FD +++  +PN+ +MAP DE+EL  MV T  + +  P
Sbjct: 409 LPVLFALDRAGIVGEDGPTHHGLFDYSYLRHIPNLTIMAPKDENELRHMVFTALNTNG-P 467

Query: 554 VCFRYPRGAIVRTDLPGYRGIPIE-------IGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
           V  RYPRG+ +        G+PI+       IG    +  G +VA L  G+MV  C++AR
Sbjct: 468 VAIRYPRGSGL--------GVPIDQSLQQLTIGVADEVKTGTNVAFLAVGSMVGTCIEAR 519

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG 665
            +L+  GI  +V +ARF KPLD +++R++C+N   +ITVEE  + GGFGS V  +I    
Sbjct: 520 EILASEGILASVINARFIKPLDEQMIRKVCKNFGIIITVEENVLAGGFGSSVLEYIHDQN 579

Query: 666 LLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTR 714
           + D  V    +  PD +IE  +  Q LA  GL    IA+TA S + + +
Sbjct: 580 IDD--VNVLRLGFPDQFIEQGARKQILAKYGLDAAGIASTAKSYVQKIK 626


>gi|238024939|ref|YP_002909171.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia glumae BGR1]
 gi|237879604|gb|ACR31936.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia glumae BGR1]
          Length = 634

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 271/641 (42%), Positives = 380/641 (59%), Gaps = 46/641 (7%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L  +++P  L+ L  ++L+ LA E+R+ +   VSKT   L S+L  VELT+ALH+VF+ 
Sbjct: 4   LLKTIDDPADLRRLDRRQLQPLADELRAFVLDSVSKTGGHLSSNLGTVELTLALHYVFNT 63

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+I+WDVG QTY HKILTGRR  + TLR+ DGISG+  RSES YD F   H   S+SA
Sbjct: 64  PDDRIVWDVGHQTYPHKILTGRREQMATLRQFDGISGFPRRSESVYDTFGTAHSSTSISA 123

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLD-SNMIVILNDSRHSLHPK 259
            LGMA+   + G     + VI +G   AG A+EAM+NAG  + + ++VILND+  S+ P 
Sbjct: 124 ALGMAIGSQLNGDDRFSIAVIGDGAMTAGMAFEAMNNAGVSEHAKLLVILNDNDMSISP- 182

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                   + AL+  L+R+ S + +   R   + +   +   + E A K++E+A+GM+ P
Sbjct: 183 -------PVGALNRHLARLMSGRFYAAARAGVERVLS-VAPPVLELARKLEEHAKGMVVP 234

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             +TLFEE G  YIGP+DGH+++ LI  LQ +  L   GP  +HVVT   ++ +  + +E
Sbjct: 235 --ATLFEEFGFNYIGPIDGHDLDSLIPTLQNIKEL--RGPQFLHVVT---KKGQGYKLAE 287

Query: 380 AIEKQQEGASDSNSL-----PFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
           A      G    N             +TY   F E L   AE D  +V +   M     +
Sbjct: 288 ADPVLYHGPGKFNPAEGIKPSAAPAKKTYTQVFGEWLCDMAELDARVVGITPAMREGSGM 347

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F+++FP RY+DVG+AEQHAVTF+ GLA  GLKP   I S FLQRAYDQ+++D+  Q L
Sbjct: 348 VEFEKRFPARYYDVGIAEQHAVTFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDIALQNL 407

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PV F I  AGLVG+DG T  GA+D+ F+ C+PNM VMA SDEDE   M+ T A     P 
Sbjct: 408 PVVFAIDRAGLVGADGATHAGAYDLAFLRCIPNMTVMAASDEDECRQMLYT-AVQQPNPT 466

Query: 555 CFRYPRGAIVRTDLPGYRGI-PIEIGKGKVL-----VEGKDVALLGYGAMVQNCLKARAL 608
             RYPRGA     +P  + +  + +GKG+V       EGK VA+L +G MV     A +L
Sbjct: 467 AVRYPRGA--GAGVPTVKAMTALPVGKGEVRRRSAQPEGKRVAILAFGTMV-----APSL 519

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLL 667
            +   ID TVA+ RF KP+D +L+REL + H +L+TVEEG + GG GS       ++ L+
Sbjct: 520 AAAEQIDATVANMRFVKPVDAELIRELAETHDYLVTVEEGCVQGGAGS-----ACVEALM 574

Query: 668 DSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAAT 705
           +SGV  RP++   LPD +I+H  P + L+L GL    IA +
Sbjct: 575 ESGV-IRPVLQLGLPDRFIDHGEPAKLLSLCGLDAAGIAKS 614


>gi|312795724|ref|YP_004028646.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia rhizoxinica
           HKI 454]
 gi|312167499|emb|CBW74502.1| 1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7) [Burkholderia
           rhizoxinica HKI 454]
          Length = 648

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 271/645 (42%), Positives = 378/645 (58%), Gaps = 57/645 (8%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L  +++P  L+ L  ++L+ LA E+R+ +   VS+T   L S+L  VELT+ALH+VF  
Sbjct: 15  LLKTIDDPAALRRLERRQLQPLADELRAFVLDSVSQTGGHLSSNLGTVELTIALHYVFDT 74

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+I+WDVG QTY HKILTGRR  + TLR+  GISG+  R ESEYD F   H   S+SA
Sbjct: 75  PADRIVWDVGHQTYPHKILTGRRDQMSTLRQLGGISGFPRRCESEYDTFGTAHSSTSISA 134

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPK 259
            LGMA+A  +KG+    + VI +G   AG+A+EA++NAG   D  ++VILND+  S+ P 
Sbjct: 135 ALGMAIASQLKGEDRYAIAVIGDGAMTAGEAFEALNNAGVCEDIPLLVILNDNDMSISP- 193

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGR---GMHEWAAKVDEYARGM 316
                   + AL+  L+R+ S K +      AK   +R+ R    M E A K++E+A+GM
Sbjct: 194 -------PVGALNRYLARLMSGKFY----ATAKKGVERVLRHAPPMLELARKLEEHAKGM 242

Query: 317 IGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQ 376
           + P  +TLFEE G  YIGP+DGH+++ LI  LQ +  L   GP  +HVVT   ++ +  +
Sbjct: 243 VTP--ATLFEEFGFNYIGPIDGHDLDALIPTLQNIRGL--RGPQFLHVVT---KKGQGYK 295

Query: 377 KSEAIEKQQEGASDSNSL----PFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
            +EA      G    N      P  +  +TY   F E L   AE D  +V +   M    
Sbjct: 296 LAEADPVLYHGPGKFNPAEGIKPAASSKKTYTQVFGEWLCDAAELDPRVVGITPAMREGS 355

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            L  F+++FP+RYFDVG+AEQHAVTF+ GLA  GLKP   I S FLQR YDQ+++DV  Q
Sbjct: 356 GLVEFEQRFPQRYFDVGIAEQHAVTFAGGLAAEGLKPVVAIYSTFLQRGYDQLIHDVALQ 415

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
            LPV F +  AGLVG+DG T  GA+D+ ++ C+PNM+VMAP+DE+E   M+ T   I+  
Sbjct: 416 NLPVVFALDRAGLVGADGATHAGAYDMAYLRCIPNMVVMAPADENECRQMLHTGLQIEG- 474

Query: 553 PVCFRYPRGAIVRTDLPGY----RGIPIEIGKGKVLVE-----GKDVALLGYGAMVQNCL 603
           P   RYPRG       PG     R   + +GKG++  +     G  VA+L +G+M+    
Sbjct: 475 PSAVRYPRGTG-----PGVATHKRLSAVPVGKGEIRRQSQAPAGHRVAILAFGSML---- 525

Query: 604 KARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIA 662
            A +L +    D TVA+ RF KPLD  LVR+L   H  L+TVEEG + GG GS     + 
Sbjct: 526 -APSLTAAQEFDATVANMRFVKPLDEALVRQLADTHELLVTVEEGCVMGGAGSACIESLQ 584

Query: 663 LDGLLDSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAA 704
             G++      RP++   LPD +I+H  PT+ LA  GL    IA+
Sbjct: 585 AAGII------RPVLQLGLPDRFIDHGDPTKLLAACGLDAAGIAS 623


>gi|149377247|ref|ZP_01894994.1| 1-deoxy-D-xylulose-5-phosphate synthase [Marinobacter algicola
           DG893]
 gi|149358435|gb|EDM46910.1| 1-deoxy-D-xylulose-5-phosphate synthase [Marinobacter algicola
           DG893]
          Length = 644

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 267/650 (41%), Positives = 381/650 (58%), Gaps = 45/650 (6%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD ++ P +L+ L  ++L QLA E+R+ L   V +T     + L  +ELTVALH+VF
Sbjct: 17  TPLLDRIDTPGQLRELAAEQLTQLARELRAFLLWSVGQTGGHFGAGLGVLELTVALHYVF 76

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+++WDVG Q Y HKILTGRR  ++++R+KDG++G+  R+ESEYD F  GH   S+
Sbjct: 77  NTPEDRLVWDVGHQAYPHKILTGRRERMNSIRRKDGLAGFPKRAESEYDTFGVGHSSTSI 136

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LGMA+A  ++G     + VI +G   AG A+EA+++AG+LD+NM+VILND+  S+  
Sbjct: 137 SAALGMAIASRMQGTGRKSIAVIGDGAMTAGMAFEALNHAGHLDANMLVILNDNDMSI-- 194

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                   ++  LS+  +++ +S+++ Q+R+  K + +   + M   A K +E+ +GMI 
Sbjct: 195 ------SRNVGGLSNYFAKLLASRTYNQVRDSGKRVLQGTPQLM-ALARKTEEHFKGMIS 247

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR----RAED 374
           P   TLFEELG  YIGP+DGH++  L+  L+ +  L   GP  +HVVT + +       D
Sbjct: 248 P--GTLFEELGFNYIGPIDGHDLPLLLETLENIRELD--GPQFLHVVTTKGKGFAPAEAD 303

Query: 375 TQKSEAIEKQQEGASDSNSLPFGNYSR--TYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
                AI K  E    S   P         Y + F + L   AE D  IV +   M    
Sbjct: 304 PIGYHAINK-IEPVPPSKPEPVAPKPSKLKYANVFGQWLCDAAEADDRIVGITPAMCEGS 362

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            L  F ++FP+RYFDV +AEQH+VT +AGLAC G KP   I S FLQRAYDQ+++DV  Q
Sbjct: 363 DLLAFSQRFPDRYFDVAIAEQHSVTLAAGLACDGAKPVVAIYSTFLQRAYDQLIHDVAIQ 422

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
            L V F I  AGLVG DGPT  GAFDI+++ C+PNMIVM PSDE+E   ++ T   + + 
Sbjct: 423 NLDVLFAIDRAGLVGEDGPTHAGAFDISYLRCVPNMIVMTPSDENETRQLLHT-GMLFEG 481

Query: 553 PVCFRYPRGAIVRTDLPGYRGI----PIEIGKGKVLVEGKDVALLGYGAMVQNCLKARAL 608
           P   RYPRG       PG   I    P+ IGKG++  EG  VA+L +G ++   L+A   
Sbjct: 482 PAAVRYPRGTG-----PGAEMIRELAPLPIGKGRLAKEGSGVAILNFGTLLTPALEAAKS 536

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLL 667
           L       TVAD RF KPLD +L+  L + H  L+T+EE +I GG GS V+ F      L
Sbjct: 537 LG-----ATVADMRFVKPLDEELILALAEKHGLLVTIEENAIAGGAGSAVTEF------L 585

Query: 668 DSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTR 714
           +S    +P++   LPD +I+H    + L+  GL    I  T  + L R +
Sbjct: 586 NSRDVSQPVLQIGLPDTFIDHGKHGELLSSCGLDAEGIKRTIETRLERMK 635


>gi|114566129|ref|YP_753283.1| deoxyxylulose-5-phosphate synthase [Syntrophomonas wolfei subsp.
           wolfei str. Goettingen]
 gi|122318773|sp|Q0AZE2.1|DXS_SYNWW RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|114337064|gb|ABI67912.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Syntrophomonas wolfei
           subsp. wolfei str. Goettingen]
          Length = 638

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 246/611 (40%), Positives = 373/611 (61%), Gaps = 23/611 (3%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           IL+ + +P  LK L++ E+ QLA EIR  L   V+K    L S+L  VEL++ALH VF +
Sbjct: 4   ILNTINSPRDLKKLSLPEMTQLANEIRQLLVKSVAKCGGHLASNLGVVELSLALHTVFDS 63

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P DKI+WDVG Q Y HKILTGRR  + TLR+  GISG+    ESEYD FN GH   S+SA
Sbjct: 64  PEDKIIWDVGHQAYVHKILTGRREQMSTLRQYGGISGFPKVEESEYDAFNTGHSSTSISA 123

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKI 260
            LGMA+ARD++G+   +V VI +G   AG A+EA+++AG  DS++IV+LND+  S+    
Sbjct: 124 ALGMALARDLQGQSNSVVAVIGDGALTAGMAFEALNHAGQEDSDLIVVLNDNEMSI---- 179

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKR---IGRGMHEWAAKVDEYARGMI 317
                 ++ A+S+ L+R+++  S+ + +E  + +  R   IG  +   A K  +  + ++
Sbjct: 180 ----SKNVGAMSAYLNRLRTDPSYSRTKEEIESVLNRIPGIGPNLARAAGKFKDTVKYLM 235

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDT-Q 376
            P    +FEELG  YIGPV+GH++ +L +VL  +  +   GP+L+H +T++ +  E   Q
Sbjct: 236 VP--GIIFEELGFTYIGPVNGHDLAELKAVLSNIKKM--KGPILLHTITQKGKGYEPAFQ 291

Query: 377 KSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQL 436
           K +          D+ +       +TY + F + ++ +A++D  +V + A M     L  
Sbjct: 292 KPDIFHGVGPFDVDTGT-QLKKSLKTYTEIFGDFMLNQAQRDNKLVAITAAMTSGTGLSE 350

Query: 437 FQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPV 496
           F   FPER+FDVG+ EQHAVT +AG+A  GL+P   + S FLQRAYDQ+V+DV  Q+LPV
Sbjct: 351 FSRNFPERFFDVGICEQHAVTLAAGMASSGLRPVVAVYSTFLQRAYDQIVHDVALQKLPV 410

Query: 497 RFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCF 556
            F I  AGLVG DGPT  GAFD +++  +PN+I+MAP+DE+ELVDM+ +  S++  PV  
Sbjct: 411 IFAIDRAGLVGEDGPTHHGAFDFSYLRHIPNLIIMAPADENELVDMLHSAFSMEG-PVAI 469

Query: 557 RYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDV 616
           RYPRG      +   R + +E G+ +++ EG+D+A++  G  V        LL+  G++ 
Sbjct: 470 RYPRGVGEGVRIKSERQL-LEPGQSRLIAEGQDLAIIAVGRGVSIARDVVDLLAGKGVNP 528

Query: 617 TVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVKWRP 675
            + DARF KPLD +++    Q +  L+T+E+ S+ GGFGS +   +  +G+     +   
Sbjct: 529 LLVDARFVKPLDRRVIAGAAQKYHRLLTIEDNSLAGGFGSAIGEMLVEEGI---DAELLH 585

Query: 676 IVLPDNYIEHA 686
           I LPD ++EH 
Sbjct: 586 IALPDEFVEHG 596


>gi|387129646|ref|YP_006292536.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylophaga sp. JAM7]
 gi|386270935|gb|AFJ01849.1| 1-deoxy-D-xylulose 5-phosphate synthase [Methylophaga sp. JAM7]
          Length = 610

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 257/633 (40%), Positives = 379/633 (59%), Gaps = 43/633 (6%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L+ +++P  L+ L+ K+L QLA EIR+ +   V +T   + S+L  +ELT+ALH+VF+ 
Sbjct: 7   LLEQIDSPQDLRQLSRKQLPQLASEIRALIIDSVQQTGGHIASNLGVIELTLALHYVFNT 66

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+++WDVG Q+YAHKI+TGRR  +HT+R+ DG+SG+  RSES +D F  GH   SVSA
Sbjct: 67  PEDRLVWDVGHQSYAHKIITGRRDKMHTMRQADGLSGFPKRSESPFDSFGVGHSSTSVSA 126

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKI 260
            LGMA+A          V +I +G   AGQAYEA+++AG L +N++V+LND+        
Sbjct: 127 ALGMALAAQSNQDARRAVAIIGDGALTAGQAYEALAHAGDLSANLLVVLNDN-------- 178

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQ 320
           E S   ++  +++ L+R+ SS+ +   RE +K + ++I     E A + +E+ +GM+ P 
Sbjct: 179 EMSISRNVGGMANYLARLLSSRFYTSAREGSKKVLEKIPSAW-EIARRAEEHMKGMVVP- 236

Query: 321 GSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSEA 380
             TLFEE+G  YIGP+DGHN++ LI+ L  + +    GP  +H+VT++ +          
Sbjct: 237 -GTLFEEMGFNYIGPIDGHNLDTLITTLGNLRN--CKGPQFLHIVTKKGK--------GF 285

Query: 381 IEKQQEGASDSNSLPFGNYS---RTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLF 437
              +QE        P G  S   ++Y   F + LV  A  DK ++ +   M     L  F
Sbjct: 286 TPAEQEPCKYHGVSPAGGKSSAGKSYTQVFSDWLVDMAVADKQLIGITPAMCEGSGLNRF 345

Query: 438 QEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVR 497
            E+FP+RYFDVG+AEQHAVT +AGLAC   KP   I S FLQRAYDQ+++DV  Q LPV 
Sbjct: 346 AERFPDRYFDVGIAEQHAVTLAAGLACENKKPVVAIYSTFLQRAYDQLIHDVALQNLPVL 405

Query: 498 FVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFR 557
           F I  AGLVG+DGPT  G+FD+T++ C+PNM++MAP+DE+E   M+ T    D  P   R
Sbjct: 406 FAIDRAGLVGADGPTHAGSFDLTYLRCIPNMLIMAPADENECRQMLTTGFHFDG-PAAVR 464

Query: 558 YPR----GAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
           YPR    G+ V+ DL       + IGK K L +G+ VA+L +G+M+   L+A        
Sbjct: 465 YPRGVGSGSPVQPDLSA-----LPIGKAKQLRQGQKVAILAFGSMLSAALEAGE-----K 514

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVK 672
            D +V + RF KPLD  L+ +L  +H  LIT+EE ++ GG GS V+ +++  G   S   
Sbjct: 515 TDASVINMRFVKPLDTTLINQLADSHDLLITIEENAVAGGAGSGVAEYLSSIG---SKTP 571

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAAT 705
            R I LPD + +  +  Q L   GL+ + +  T
Sbjct: 572 IRLIGLPDRFQDQGNHQQMLNDVGLSANGLIDT 604


>gi|392419664|ref|YP_006456268.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas stutzeri CCUG
           29243]
 gi|390981852|gb|AFM31845.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas stutzeri CCUG
           29243]
          Length = 632

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 272/647 (42%), Positives = 382/647 (59%), Gaps = 43/647 (6%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+L     P +L+ L   EL++LA E+R EL   V  T     + L  +ELT+ALH+V+
Sbjct: 15  TPVLGRAATPEQLRRLGEAELEELANELRQELLYSVGHTGGHFGAGLGVIELTIALHYVY 74

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR  + TLR+KDG++ +  RSESEYD F  GH   S+
Sbjct: 75  DTPDDRLVWDVGHQAYPHKILTGRRERMATLRQKDGLAAFPRRSESEYDTFGVGHSSTSI 134

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LGMAVA  +KG++   + VI +G   AG A+EA+++A  + +NM+V+LND+  S+  
Sbjct: 135 SAALGMAVAARLKGEQRKSIAVIGDGALTAGMAFEALNHAPEVGANMLVVLNDNDMSI-- 192

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                   ++  LS+ L++I SS+++  +RE +K +  R+  G  E A + +EYA+GM+ 
Sbjct: 193 ------SRNVGGLSNYLAKILSSRTYSSMREGSKKILSRL-PGAWEIARRTEEYAKGMLV 245

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR----RAED 374
           P   TLFEELG  YIGP+DGH++  LI+ L+ +  L   GP  +HVVT++ +       D
Sbjct: 246 P--GTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLD--GPQFLHVVTKKGKGFAPAEAD 301

Query: 375 TQKSEAIEKQQE-GASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
                AI K +  GA      P G     Y + F + L   A  D  +  +   M+    
Sbjct: 302 PITWHAISKLEPVGAPVKPKKPSGP---KYSNVFGQWLCDMAAADPRLTGITPAMKEGSD 358

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L  F E++P+RYFDV +AEQHAVT +AG+AC G+KP   I S FLQRAYDQ+++DV  Q 
Sbjct: 359 LVAFSERYPQRYFDVAIAEQHAVTLAAGMACEGMKPVVAIYSTFLQRAYDQLIHDVAVQN 418

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           L V F I  AGLVG DGPT  G+FD++++ C+P M+VM PSDE+E+  M+ T    +  P
Sbjct: 419 LDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDENEMRRMLTTGYHFEG-P 477

Query: 554 VCFRYPRGAIVRTDL-PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
              RYPRG+     + PG    P+EIGK  V  EG  VALL +G  +   L+    L   
Sbjct: 478 AAVRYPRGSGPNATIEPGLE--PLEIGKAVVRREGSKVALLVFGVQLPEALQVGETL--- 532

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGV 671
             D TV D RF KPLD  L+REL  +H  L+T+EE SI  G GS V+ F+  + +L    
Sbjct: 533 --DATVVDMRFVKPLDEALLRELAGSHELLVTIEENSIMAGAGSAVAEFLTGESIL---- 586

Query: 672 KWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAATA---LSLLGR 712
             +P++   LPD Y+EHA P++ LA  GL    I A     L+ LG+
Sbjct: 587 --KPMLHLGLPDYYVEHAKPSEMLAECGLDAAGIEAAVRKRLAALGK 631


>gi|167842190|ref|ZP_02468874.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia thailandensis
           MSMB43]
 gi|424905504|ref|ZP_18329007.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia thailandensis
           MSMB43]
 gi|390928397|gb|EIP85801.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia thailandensis
           MSMB43]
          Length = 634

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 271/640 (42%), Positives = 378/640 (59%), Gaps = 48/640 (7%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L  +++P  L+ L  ++L+ LA E+R+ +   VSKT   L S+L  VELT+ALH+VF  
Sbjct: 4   LLKTIDDPADLRRLDRRQLQPLADELRAFVLDSVSKTGGHLSSNLGTVELTIALHYVFDT 63

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+I+WDVG QTY HKILTGRR  + TLR+  GISG+  RSESEYD F   H   S+SA
Sbjct: 64  PDDRIVWDVGHQTYPHKILTGRRDGMKTLRQLGGISGFPRRSESEYDTFGTAHSSTSISA 123

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPK 259
            LGMA+   + G     + VI +G   AG A+EAM+NAG   D+ ++VILND+  S+ P 
Sbjct: 124 ALGMAIGSKLNGDDRFSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDNDMSISP- 182

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                   + AL+  L+R+ S + +   R   + +   +   + E A K++E+A+GM+ P
Sbjct: 183 -------PVGALNRHLARLMSGRFYAAARAGVERVLS-VAPPVLELARKLEEHAKGMVVP 234

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             +TLFEE G  YIGP+DGH+++ LI  LQ +  L   GP  +HVVT   ++ +  + +E
Sbjct: 235 --ATLFEEFGFNYIGPIDGHDLDSLIPTLQNIKEL--RGPQFLHVVT---KKGQGYKLAE 287

Query: 380 AIEKQQEGASDSNSLPFGNYS-----RTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
           A      G    N       S     +TY   F E L   AE D  +V +   M     +
Sbjct: 288 ADPVLYHGPGKFNPAEGIKPSTTPAKKTYTQVFGEWLCDAAELDARVVGITPAMREGSGM 347

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F+++FPERY+DVG+AEQHAVTF+ GLA  GLKP   I S FLQRAYDQ+++DV  Q L
Sbjct: 348 VEFEKRFPERYYDVGIAEQHAVTFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNL 407

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PV F I  AGLVG+DG T  GA+D+ F+ C+PNM VMA SDE+E   M+ T A     P 
Sbjct: 408 PVVFAIDRAGLVGADGATHAGAYDLAFLRCIPNMTVMAASDENECRQMLYT-ALQQPNPT 466

Query: 555 CFRYPRG-----AIVR--TDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARA 607
             RYPRG     A V+  T+LP  +G   E+ +     +GK +A+L +G MV   + A  
Sbjct: 467 AVRYPRGAGTGVATVKAFTELPLGKG---EVRRRTSQPDGKRIAILAFGTMVAPSIAAAE 523

Query: 608 LLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGL 666
            L     D TVA+ RF KP+D +LVREL Q H +L+TVEEG + GG GS       ++ +
Sbjct: 524 AL-----DATVANMRFVKPIDAELVRELAQTHDYLVTVEEGCVMGGAGS-----ACVEAM 573

Query: 667 LDSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIA 703
           ++SGV  RP++   LPD +++H  P + L++ GL    IA
Sbjct: 574 MESGV-VRPVLQLGLPDRFVDHGDPAKLLSMCGLDSDGIA 612


>gi|395005696|ref|ZP_10389565.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidovorax sp. CF316]
 gi|394316252|gb|EJE52982.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidovorax sp. CF316]
          Length = 627

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 256/634 (40%), Positives = 383/634 (60%), Gaps = 44/634 (6%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+L  V +P  L+++   +LK LA E+R+ +   VS+T   L S+L  VELTVALHHVF+
Sbjct: 7   PLLQTVNDPADLRAMPRADLKALATELRAFVLESVSQTGGHLSSNLGTVELTVALHHVFN 66

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG QTY HKILTGRR  ++TLR+  GISG+  R+ES YD F   H   S+S
Sbjct: 67  TPEDRLVWDVGHQTYPHKILTGRRDRMNTLRQMGGISGFPQRAESPYDTFGTAHSSTSIS 126

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           A LGMA+A  +KG+    V +I +G   AG A+EA++N G  D+N++V+LND+  S+ P 
Sbjct: 127 AALGMALAAKVKGENRHAVAIIGDGAMTAGMAFEALNNGGVADANLLVVLNDNDMSISP- 185

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                   + AL+  L+++ S + +   + V K + + +   + E A + ++ A+GM+ P
Sbjct: 186 -------PVGALNRYLAQLMSGQFYAAAKNVGKTVLRPV-PPLLELAKRFEQQAKGMVVP 237

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             +TLFE+ G  YIGP+DGH+++ LI  L+ + SL   GP  +HVVT++  +     +++
Sbjct: 238 --ATLFEKFGFNYIGPIDGHDLDSLIPTLENIKSL--KGPQFLHVVTKKG-QGYKLAEAD 292

Query: 380 AIEKQQEGASD-SNSLPFGNYS--RTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQL 436
            +     G  D +  L  G  S  +T+   F + L      D+ +V +   M     +  
Sbjct: 293 PVAYHGPGKFDPAVGLVKGTASPKQTFTQVFGQWLCDMGAHDQRLVGITPAMREGSGMVE 352

Query: 437 FQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPV 496
           F+++FPERY+DVG+AEQHAVTF+AG+AC GLKP   I S FLQR YDQ+++DV  Q LPV
Sbjct: 353 FEKRFPERYYDVGIAEQHAVTFAAGMACEGLKPVVAIYSTFLQRGYDQLIHDVALQNLPV 412

Query: 497 RFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCF 556
            F +  AGLVG+DG T  GA+DI F+ C+PNM +  P+DE E   +++T A   D PV  
Sbjct: 413 VFALDRAGLVGADGATHAGAYDIPFVRCIPNMSMACPADERECRQLLST-AFEQDHPVAV 471

Query: 557 RYPRGAIVR-TDLPGYRGIPIEIGKGKVLVE--------GKDVALLGYGAMVQNCLKARA 607
           RYPRG+      L G  G+P   GKG++  E        G  +A+L +G ++   L+A  
Sbjct: 472 RYPRGSGAGVAPLAGLEGLP--FGKGEIRRERKAAAGEAGPRIAILAFGTLLYPALEAGE 529

Query: 608 LLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEG-SIGGFGSHVSHFIALDGL 666
            L     D TVA+ R+ KP+D++L+R++ + H  L+TVEEG ++GG GS V+  +   G+
Sbjct: 530 AL-----DATVANMRWAKPVDVELLRDVAERHDVLVTVEEGATMGGAGSAVTEALNAAGI 584

Query: 667 LDSGVKWRPIV---LPDNYIEHASPTQQLALAGL 697
           +      RP++   LPD +IEH  P + L+L GL
Sbjct: 585 V------RPVLQLGLPDAFIEHGDPAKLLSLQGL 612


>gi|428224504|ref|YP_007108601.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geitlerinema sp. PCC 7407]
 gi|427984405|gb|AFY65549.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geitlerinema sp. PCC 7407]
          Length = 637

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 264/648 (40%), Positives = 383/648 (59%), Gaps = 47/648 (7%)

Query: 82  LDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAP 141
           L  + +P +L  L++ +L+Q+A +IR +    V+K+   L   L  VELT+AL+      
Sbjct: 3   LSEITHPNQLHGLSVYQLQQVARQIREKHLETVAKSGGHLGPGLGVVELTLALYQTLDLD 62

Query: 142 VDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAG 201
            DK++WDVG Q Y HK++TGR +  HTLR+KDGI+GY  R ES++D F AGH   S+SA 
Sbjct: 63  RDKVIWDVGHQAYPHKLITGRYNNFHTLRQKDGIAGYLKRGESKFDHFGAGHASTSISAA 122

Query: 202 LGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLD-SNMIVILNDSRHSLHPKI 260
           LGMA+ARD+KG++  +V VI +G    G A EA+++AG+L  +N++V+LND+  S+ P  
Sbjct: 123 LGMAIARDLKGEKFKVVAVIGDGALTGGMALEAINHAGHLPRTNLMVVLNDNDMSISP-- 180

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKR---IGRGMHEWAAKVDEYARGMI 317
                 ++ ALS  L++++ S   + L +  +   K    +G  +     +V E  + + 
Sbjct: 181 ------NVGALSRYLNKMRLSPPMQFLSDNLEEQFKHLPFVGDSLSPELNRVKEGMKRLA 234

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQK 377
             +   +FEELG  YIGPVDGHN+E+LI+  Q+  S   +GPVLVHV T +        K
Sbjct: 235 VSKVGAVFEELGFTYIGPVDGHNLEELITTFQQAHS--QVGPVLVHVSTTKG-------K 285

Query: 378 SEAIEKQQEGASDSNSLPFGNYS-----------RTYDDCFIEALVMEAEKDKDIVVVHA 426
             AI +Q +    + S PF   +            +Y   F   LV  AE +  IV + A
Sbjct: 286 GYAIAEQDQVGYHAQS-PFNLATGKAIPASKPKPPSYSKVFAHTLVKLAEDNPKIVGITA 344

Query: 427 GMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVV 486
            M     L   Q K P++Y DVG+AEQHAVT + GLAC G++P   I S FLQRA+DQVV
Sbjct: 345 AMATGTGLDKLQAKLPKQYMDVGIAEQHAVTLAGGLACEGMRPVVAIYSTFLQRAFDQVV 404

Query: 487 NDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATV 546
           +DV  Q LPV F +  AG+VG+DGPT  G +DI+++ C+PNM++MAP DE EL  M+ T 
Sbjct: 405 HDVCIQNLPVFFCLDRAGIVGADGPTHQGMYDISYLRCIPNMVLMAPKDEAELQQMLVTG 464

Query: 547 ASIDDRPVCFRYPRGAIVRTDL--PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLK 604
            +  D P+  RYPRG      L   G+  +P  IGK +VL +G D+ LLGYG+MV   ++
Sbjct: 465 VNYTDGPIALRYPRGNGYGVPLMEEGWEALP--IGKAEVLRQGDDLLLLGYGSMVYPAMQ 522

Query: 605 ARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIAL 663
              +LS+ G++ TV +ARF KP+D +L+  L Q    ++T+EEGSI GGFGS V+     
Sbjct: 523 TAEILSEHGVEATVVNARFAKPIDDELILPLAQKIGRVVTMEEGSIMGGFGSGVA----- 577

Query: 664 DGLLDSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAATALS 708
           + LLD+GV   P++   +PD  +EHA P +     GLT   +A   L+
Sbjct: 578 EALLDAGVVV-PVMRLGVPDTLVEHAKPEESKVELGLTPSQMAERILA 624


>gi|167583905|ref|ZP_02376293.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia ubonensis Bu]
          Length = 634

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 272/641 (42%), Positives = 379/641 (59%), Gaps = 46/641 (7%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L  +++P  L+ L  ++L+ LA E+R+ +   VSKT   L S+L  VELT+ALH+VF+ 
Sbjct: 4   LLKTIDDPADLRRLDRRQLQPLADELRAFVLDSVSKTGGHLSSNLGTVELTIALHYVFNT 63

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+I+WDVG QTY HKILTGRR  +H+LR+ DGISG+  RSESEYD F   H   S+SA
Sbjct: 64  PNDRIVWDVGHQTYPHKILTGRRDQMHSLRQLDGISGFPRRSESEYDTFGTAHSSTSISA 123

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPK 259
            LGMA+   + G     + VI +G   AG A+EAM+NAG   D+ ++VILND+  S+ P 
Sbjct: 124 ALGMAIGSQLNGDDRFSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDNDMSISP- 182

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                   + AL+  L+R+ S + +   R   + +   +   + E A K++E+A+GM+ P
Sbjct: 183 -------PVGALNRHLARLMSGRFYAAARAGVERVLS-VAPPVLELARKLEEHAKGMVVP 234

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             +TLFEE G  YIGP+DGH+++ LI  LQ +  L   GP  +HVVT   ++ +  + +E
Sbjct: 235 --ATLFEEFGFNYIGPIDGHDLDSLIPTLQNIKEL--RGPQFLHVVT---KKGQGYKLAE 287

Query: 380 AIEKQQEGASDSNSL----PFGNYS-RTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
           A      G    N      P    + +TY   F E L  EAE+D  +V +   M     +
Sbjct: 288 ADPVLYHGPGKFNPAEGIKPSATPAKKTYTQVFGEWLCDEAERDSRVVGITPAMREGSGM 347

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F+++F +RY+DVG+AEQHAVTF+ GLA  GLKP   I S FLQRAYDQ+++DV  Q L
Sbjct: 348 VEFEKRFKDRYYDVGIAEQHAVTFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNL 407

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PV F I  +GLVG+DG T  GA+D+ FM C+PNM VM PSDE+E   M+ T A     P 
Sbjct: 408 PVVFAIDRSGLVGADGATHAGAYDLAFMRCIPNMTVMVPSDENECRQMLHT-ALQQPNPT 466

Query: 555 CFRYPRGAIVR-TDLPGYRGIPIEIGKGKVL-----VEGKDVALLGYGAMVQNCLKARAL 608
             RYPRGA      +  +  IP  +GKG+V       +GK +A+L +G MV   L A   
Sbjct: 467 AVRYPRGAGTGVATVKEFTEIP--LGKGEVRRRTSQPQGKRIAILAFGTMVAPSLAAAEE 524

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLL 667
           L     D TVA+ RF KP+D  LVREL + H  L+T EEG + GG GS       ++ L+
Sbjct: 525 L-----DATVANMRFVKPVDAALVRELAETHDVLVTSEEGCVMGGAGS-----ACVEALM 574

Query: 668 DSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAAT 705
           +SGV  RP++   LPD +I+H    + L+  GL G  IA +
Sbjct: 575 ESGV-IRPVLQLGLPDRFIDHGDHAKLLSQCGLDGAGIAKS 614


>gi|434407504|ref|YP_007150389.1| 1-deoxy-D-xylulose-5-phosphate synthase [Cylindrospermum stagnale
           PCC 7417]
 gi|428261759|gb|AFZ27709.1| 1-deoxy-D-xylulose-5-phosphate synthase [Cylindrospermum stagnale
           PCC 7417]
          Length = 635

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 255/638 (39%), Positives = 380/638 (59%), Gaps = 27/638 (4%)

Query: 82  LDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAP 141
           L  + +P +L  L+I++L+Q+A +IR +    V+ T   L   L  VELT+ L+      
Sbjct: 3   LSEITHPNQLHGLSIRQLQQIARQIRDKHLQTVAATGGHLGPGLGVVELTLGLYQTLDLD 62

Query: 142 VDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAG 201
            DK++WDVG Q Y HK+LTGR S  HTLR+K+G++GY  R E+++D F AGH   S+SA 
Sbjct: 63  RDKVIWDVGHQAYPHKLLTGRYSNFHTLRQKNGVAGYLKRCENKFDHFGAGHASTSISAA 122

Query: 202 LGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPKI 260
           LGMA+ARD+KG++   V VI +G    G A EA+++AG+L  ++++V+LND+  S+ P  
Sbjct: 123 LGMALARDLKGEKFKAVAVIGDGALTGGMALEAINHAGHLPKTSLLVVLNDNEMSISP-- 180

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRI---GRGMHEWAAKVDEYARGMI 317
                 ++ A+   L++++ S   + +++  +G  K+I   G  +     ++ E  + + 
Sbjct: 181 ------NVGAIPRYLNKMRLSAPVQFIKDNFEGQLKQIPFVGESLSPELERIKEGMKRLA 234

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQK 377
            P+   +FEELG  Y+GPVDGHN+E+LI+  Q+   +   GPVLVHVVT + +  E  + 
Sbjct: 235 VPKVGAVFEELGFTYMGPVDGHNLEELIATFQQAHQM--PGPVLVHVVTTKGKGYEIAEL 292

Query: 378 SEAIEKQQE--GASDSNSLPFGNYSR--TYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
            +     Q     +   ++P  N  +   Y   F   LV  AE++  IV + A M     
Sbjct: 293 DQVGYHAQNPFNVATGKAIP-SNKPKPPAYAKVFSHTLVKLAEQNPKIVGITAAMATGTG 351

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L   Q K P +Y DVG+AEQHAVT +AGLA  G++P   I S FLQRAYDQ+++DV  Q 
Sbjct: 352 LDKLQAKLPNQYIDVGIAEQHAVTLAAGLATEGMRPVAAIYSTFLQRAYDQIIHDVCIQN 411

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPV F +  AG+VG+DGPT  G +DI ++ C+PN++VMAP DE EL  MV T  +  D P
Sbjct: 412 LPVFFCLDRAGIVGADGPTHQGMYDIAYLRCIPNIVVMAPKDEAELQRMVVTGVNHTDGP 471

Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
           +  R+PRG      L      P+EIGKG++L +G DV +LGYG+MV   ++A  +LS+ G
Sbjct: 472 IAMRFPRGNGYGVPLMEEGWEPLEIGKGEILRQGDDVLILGYGSMVYTAMQAAEILSEHG 531

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSG-- 670
           I+ TV +ARF KPLD  L+  L +    ++T+EEG + GGFGS V+     + L+D+   
Sbjct: 532 IEATVINARFVKPLDTDLILPLAKQIGRVVTLEEGCLMGGFGSAVA-----EALMDADIL 586

Query: 671 VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALS 708
           V  + I +PD  ++HA+P +  A  GLT   IA   L 
Sbjct: 587 VPVKRIGVPDILVDHATPDESYAALGLTSRQIAEKVLQ 624


>gi|373467319|ref|ZP_09558618.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus sp. oral taxon
           851 str. F0397]
 gi|371758854|gb|EHO47610.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus sp. oral taxon
           851 str. F0397]
          Length = 625

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 255/635 (40%), Positives = 376/635 (59%), Gaps = 24/635 (3%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+L L+ +P  L+ L  ++L QL  E+R  L   VS+T   L S L  VELTVALH+V+ 
Sbjct: 9   PLLSLINSPEDLRLLNKEQLPQLCQELRGYLLESVSQTSGHLASGLGTVELTVALHYVYK 68

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG Q Y HKILTGRR  + T+R+KDGI  +  R ESE+D  + GH   S+S
Sbjct: 69  TPFDQLIWDVGHQAYPHKILTGRRDQMSTIRQKDGIHPFPWREESEFDVLSVGHSSTSIS 128

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           AGLG+AVA + +      V VI +G   AG A+EA+++AG + ++M+VILND+  S+   
Sbjct: 129 AGLGIAVAAERENAGRKTVCVIGDGAITAGMAFEALNHAGSVHTDMLVILNDNEMSI--- 185

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                  ++ AL++ L+RI S   +  LR+ +K +  ++   +  +  K +E+ +G++  
Sbjct: 186 -----SENVGALNNHLARIFSGSIYSTLRDGSKKILDKV-PPVKNFMKKTEEHMKGVMFS 239

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             STLFEELG  YIGPVDGHNI++L++ L  + +L   GP  +H+ T++ +     +K  
Sbjct: 240 PESTLFEELGFNYIGPVDGHNIDELVATLTNMRNL--KGPQFLHIKTKKGKGYAPAEKDP 297

Query: 380 -AIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQ 438
                  +    S  LP  N   TY   F + L   AEKD  I+ +   M     +  F 
Sbjct: 298 IGFHGVPKFDPISGELPKHNTKPTYSKIFGDWLCEMAEKDSKIIGITPAMREGSGMVEFS 357

Query: 439 EKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRF 498
           ++FPE+YFDV +AEQHAVTF+ GLA GG KP   I S FLQRAYDQ+++DV  Q LPV F
Sbjct: 358 QRFPEQYFDVAIAEQHAVTFATGLAIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPVLF 417

Query: 499 VITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRY 558
            I  AG+VG+DGPT  GAFD++FM C+PNMI+M PSDE+E   M+ T      +P   RY
Sbjct: 418 AIDRAGIVGADGPTHQGAFDLSFMRCIPNMIIMTPSDENECRQMLYTGYQC-GKPAAVRY 476

Query: 559 PRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTV 618
           PRG  +  +L     +P  IGK +++ EG+ +A+L +G ++ + L+A   L     + TV
Sbjct: 477 PRGNAIGVELTPLEILP--IGKSRLIREGQKIAILNFGTLLPSALEAAGKL-----NATV 529

Query: 619 ADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVKWRPIV 677
            D RF KP+DI+++  L Q H +L+T+EE +I GG GS V+  +   G   + +++    
Sbjct: 530 VDMRFVKPIDIEMINVLAQTHDYLVTLEENAIQGGAGSAVAEVLNSSGKSTALLQFG--- 586

Query: 678 LPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
           LPD +I  A+  + L   GL    I    L+ + +
Sbjct: 587 LPDYFIPQATQQEALKDLGLDSKGIEEKILNFIAK 621


>gi|56477948|ref|YP_159537.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aromatoleum aromaticum
           EbN1]
 gi|81598684|sp|Q5P228.1|DXS_AZOSE RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|56313991|emb|CAI08636.1| 1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7) (DXP synthase)
           (DXPS) [Aromatoleum aromaticum EbN1]
          Length = 621

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 262/634 (41%), Positives = 375/634 (59%), Gaps = 33/634 (5%)

Query: 78  PTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHV 137
           P P+L  +++P  L+ L  +EL  LA E+R+ L   VSKT   L S+L  VEL++ALH++
Sbjct: 3   PYPLLHRIDSPFDLRKLDRRELPALAAELRAFLIESVSKTGGHLSSNLGTVELSIALHYI 62

Query: 138 FHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNS 197
           F  P D+I+WDVG QTY HKILTGRR  +  LR+  GISG+  RSES YD F   H   S
Sbjct: 63  FDTPEDRIVWDVGHQTYGHKILTGRREAMSRLRQFGGISGFPRRSESSYDTFGTAHSSTS 122

Query: 198 VSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSL 256
           +SA LGMAVA   +G++   + VI +G   AG A+EA++NAG + D N++VILND+  S+
Sbjct: 123 ISAALGMAVAARNRGEQRRSIAVIGDGAMSAGMAFEALNNAGDMRDINLLVILNDNEMSI 182

Query: 257 HPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGM 316
            P         + AL+  L+R+ S +++   R   + +   +   M ++A KV+E+ +G+
Sbjct: 183 SPP--------VGALTKILARMFSGRTYNAARRAGEKVLG-VSPPMLDFARKVEEHVKGL 233

Query: 317 IGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQ 376
           I P   TLFEE G +Y GP+DGH+++ LI  LQ +  L   GP  +HV+T   R+ +  +
Sbjct: 234 ITP--GTLFEEFGFHYYGPIDGHDLDALIPTLQNLRKLN--GPHFLHVIT---RKGQGYK 286

Query: 377 KSEAIEKQQEGASDSN-----SLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMD 431
            +EA      G S  +         G    TY   F + L   A +D+ ++ +   M   
Sbjct: 287 LAEADPVLYHGVSTFDHTAGIQTAKGAAKLTYTQVFGDWLCDIAAQDEKVIGITPAMREG 346

Query: 432 LSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQ 491
             +  F ++FP RY+DVG+AEQHA+TF+AGLAC G KP   I S FLQRAYDQ+++D+  
Sbjct: 347 SGMVRFAQEFPNRYYDVGIAEQHALTFAAGLACEGFKPVVAIYSTFLQRAYDQLIHDIAL 406

Query: 492 QRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDD 551
           Q LPV F I  AGLVG+DG T  GAFD++++ C+PN++VMAP+DE+E   M+ T A   +
Sbjct: 407 QNLPVMFAIDRAGLVGADGATHHGAFDLSYLGCIPNLVVMAPADENECRQMLYT-AYRHN 465

Query: 552 RPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSK 611
            P   RYPRG  ++   P      + IGKG++   G  +ALL +G+++ N L+A   L  
Sbjct: 466 GPAAVRYPRGGGMQVG-PETAMSALPIGKGEIRRSGHRIALLVFGSLLFNALQAAEQL-- 522

Query: 612 LGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEG-SIGGFGSHVSHFIALDGLLDSG 670
              D TVA+ RF KPLD+ L+ EL  +H  L+T+EE   IGG GS V+    L+ L D  
Sbjct: 523 ---DATVANMRFVKPLDVTLIEELAASHDLLVTLEENIVIGGAGSEVAR--VLESLSDRP 577

Query: 671 VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAA 704
              R + LPD +I+H   +Q L   GL    I A
Sbjct: 578 QLLR-LGLPDTFIDHGDQSQLLESVGLDAPGIVA 610


>gi|347540555|ref|YP_004847980.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudogulbenkiania sp.
           NH8B]
 gi|345643733|dbj|BAK77566.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudogulbenkiania sp.
           NH8B]
          Length = 618

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 264/637 (41%), Positives = 383/637 (60%), Gaps = 40/637 (6%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+LD +  P  LK L   EL QLA E+R  L   VSKT     S+L ++ELT+ALH+VF 
Sbjct: 3   PLLDTINYPADLKRLARHELPQLAGELRQFLVESVSKTGGHFASNLGSIELTIALHYVFD 62

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG QTY HKILTGRR ++HT+R+K G++G+  R ESEYD F  GH   S+S
Sbjct: 63  TPHDRLVWDVGHQTYPHKILTGRRGMMHTMRQKGGLAGFPKREESEYDTFGVGHSSTSIS 122

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           A LGMA A   +G     V +I +G   AGQA+EA++NAG +D +M+V+LND+  S+ P 
Sbjct: 123 AALGMAAAAKAQGIERKSVAIIGDGAMTAGQAFEALNNAGAMDLDMLVVLNDNDMSISP- 181

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRG--MHEWAAKVDEYARGMI 317
                  ++ AL++ L+++ S + +  +++   G +K +G    + E A+KV+E+ +GM 
Sbjct: 182 -------NVGALNNYLAKLMSGRFYAAMKQ---GSSKVLGIAPPLREIASKVEEHVKGMF 231

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN---RRAED 374
            P   TLFEE G  YIGP+DGH++  L+  L+ + SL   GP  +H+VT++    + AE+
Sbjct: 232 TP--GTLFEEFGFNYIGPIDGHDLHVLVDTLKNIKSL--KGPQFLHIVTKKGQGYKLAEN 287

Query: 375 TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
              +     + + A+  +    GN   +Y   F + +   A+ D  +V +   M     L
Sbjct: 288 DPVAYHGVTKFDPANGLSGGKSGNSKPSYTQIFGDWICDMAKHDTRLVGITPAMREGSGL 347

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F+++ P+RYFDV +AEQHAVTF+AGLAC G+KP   I S FLQR YDQ+++DV  Q L
Sbjct: 348 VRFEKEHPDRYFDVAIAEQHAVTFAAGLACDGMKPVVAIYSTFLQRGYDQLIHDVALQNL 407

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PV F I  AGLVG+DGPT  GAFDI+++ C+PNM VMAPSDE+E   M+ T  ++ D P 
Sbjct: 408 PVVFAIDRAGLVGADGPTHAGAFDISYLRCIPNMTVMAPSDENECRQMLYTAFTL-DTPT 466

Query: 555 CFRYPR----GAIVRTDLPGYRGIPIEIGKGKVLVEGKD-VALLGYGAMVQNCLKARALL 609
             RYPR    GA ++ ++       + IG+G +  +G+  VA+L +G+MV   L+A    
Sbjct: 467 AVRYPRGTGPGAHIQHEMSA-----LPIGRGHIRRQGQGRVAILAFGSMVTPALQAAE-- 519

Query: 610 SKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLD 668
                D TVAD RF KPLD  L++ L ++H  ++TVEE  + GG GS     I   G+  
Sbjct: 520 ---AFDATVADMRFVKPLDTGLIKSLAESHELIVTVEENVVMGGAGSACVEAIEALGITA 576

Query: 669 SGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAAT 705
             ++   + LPD+Y+EH  P   LA  GL    I A+
Sbjct: 577 PVLQ---LGLPDDYVEHGDPALLLADCGLDAKGIEAS 610


>gi|73748558|ref|YP_307797.1| 1-deoxy-D-xylulose-5-phosphate synthase [Dehalococcoides sp. CBDB1]
 gi|118595512|sp|Q3ZXC2.1|DXS_DEHSC RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|73660274|emb|CAI82881.1| deoxyxylulose-5-phosphate synthase [Dehalococcoides sp. CBDB1]
          Length = 647

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 261/651 (40%), Positives = 380/651 (58%), Gaps = 38/651 (5%)

Query: 77  EPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHH 136
           E + +LD + +P  LK L++ EL++LAV+IR EL + V+     L SSL  VELT+ALH 
Sbjct: 14  EMSKLLDTINSPSDLKKLSLDELRELAVQIREELVNRVTLNGGHLASSLGVVELTIALHR 73

Query: 137 VFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCN 196
           VF +P DKI+WDVG Q+YAHK+LTGRR    TLR+  G+SG+T R ES +DPF AGH   
Sbjct: 74  VFESPKDKIIWDVGHQSYAHKLLTGRREQFATLRQHGGLSGFTCRDESPHDPFGAGHAST 133

Query: 197 SVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSL 256
           S+SAGLGMAVARD+  +   +++VI +G    G ++EA++NAG+L +  IVILND+  ++
Sbjct: 134 SISAGLGMAVARDLAKEDYSVISVIGDGAISGGMSFEAINNAGHLHTKFIVILNDNGMAI 193

Query: 257 HPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVD---EYA 313
            P        S  ALS  L+ ++    F   +  AK     +  G   WA       ++ 
Sbjct: 194 SP--------STGALSKFLNNVRFDPRFEFAKRNAKQTITNMPFGKAVWAFTKSIKRKFE 245

Query: 314 RGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAE 373
           + M+     +L+EELG  Y+GPVDGHNI +L + L+      S  PVL+H++T++ +  +
Sbjct: 246 KSML---PGSLWEELGFIYLGPVDGHNIRELEAALKRAKDFESK-PVLIHMITKKGKGYD 301

Query: 374 DTQ----KSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGME 429
           D +    K   I  +  G   S+ L       +Y   F + L     ++  +V + A M 
Sbjct: 302 DAEADAVKYHGISPKSGGLKSSHGL-------SYSQVFGQTLHKIMSQNPQVVAITAAMT 354

Query: 430 MDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDV 489
               L      FP+R FDVG+ EQHAVTF+AG+A  G  P  +I S FLQR +DQ+++DV
Sbjct: 355 DGCGLGEIAAAFPDRVFDVGICEQHAVTFAAGMATQGYIPVVVIYSTFLQRGFDQIIHDV 414

Query: 490 DQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASI 549
             Q+LPV F I   G+VG DG T  G FD++FMS +P+M+V APSDE++L  ++ T  + 
Sbjct: 415 CLQKLPVVFAIDRGGIVGDDGKTHQGIFDLSFMSLIPDMVVSAPSDENDLQHLIYTAVN- 473

Query: 550 DDRPVCFRYPR----GAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKA 605
             +P   RYPR    GA + + L     IP  IG+ ++LV G DVA+L  G  V     A
Sbjct: 474 SGKPFALRYPRGFGEGAEIESSL---HNIP--IGQNEILVNGSDVAILATGKSVAFAKDA 528

Query: 606 RALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALD 664
             +L++ GI  T+ + R+  PLD +LV ++ Q+H +L+TVEE  I GG GS ++  +A  
Sbjct: 529 LEILTESGIKPTLVNNRYISPLDSELVLKIAQSHKYLVTVEENVISGGLGSRINTLLAEA 588

Query: 665 GLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTRE 715
           GL++  +K   I +PD ++EH + +   A  GL G  IA   LSL+G   E
Sbjct: 589 GLVNK-IKIANIGIPDKFVEHGNQSLLRAKYGLDGKGIAQRVLSLVGNPNE 638


>gi|358636219|dbj|BAL23516.1| 1-deoxy-D-xylulose-5-phosphate synthase [Azoarcus sp. KH32C]
          Length = 620

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 264/629 (41%), Positives = 369/629 (58%), Gaps = 41/629 (6%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+L  +++P  L+ L  +EL  LA E+R  L   VSKT   L S+L  VELT+ALH++F+
Sbjct: 5   PLLQRIDSPADLRRLDRRELHALATELREFLIESVSKTGGHLSSNLGTVELTIALHYIFN 64

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+I+WDVG QTY HKILTGRR  +  LR   GISG+  R ESEYD F   H   S+S
Sbjct: 65  TPEDRIVWDVGHQTYGHKILTGRRDAMSGLRHFGGISGFPRRCESEYDTFGTAHSSTSIS 124

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHP 258
           A LGMAVA   +G+    + VI +G   AG A+EA++NAG + D+N++VILND+  S+ P
Sbjct: 125 AALGMAVAARDRGEDRRSIAVIGDGAMSAGMAFEALNNAGDMRDTNLLVILNDNEMSISP 184

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                    + AL+  L+R+ S  +F   R   + +   +   M ++A KV+E+ +G+I 
Sbjct: 185 P--------VGALTKILARMMSGSTFNAARRAGEKVLG-VAPPMLDFARKVEEHVKGLIT 235

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
           P   TLFEE G +Y GP+DGH+++ LI  LQ ++ L   GP  +HV+T   R+ +  + +
Sbjct: 236 P--GTLFEEFGFHYYGPIDGHDLDALIPTLQNLSRL--KGPHFLHVIT---RKGQGYKLA 288

Query: 379 EAIEKQQEGASDSNSLPF-----GNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
           EA      G S  +         G    TY   F + L   A +D  +V +   M     
Sbjct: 289 EADPILYHGVSKFDHTAGIQTGKGGGKLTYTQVFGDWLCDMAARDDKLVGITPAMREGSG 348

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           +  F ++FP+RY DVG+AEQHAVTF+AGLAC G +P   I S FLQRAYDQ+++DV  Q 
Sbjct: 349 MVRFAQEFPDRYHDVGIAEQHAVTFAAGLACEGFRPVVAIYSTFLQRAYDQLIHDVALQN 408

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPV F I  AGLVG+DG T  GAFD++F+ C+PN++VMAPSDE+E   M+ T A   + P
Sbjct: 409 LPVLFAIDRAGLVGADGATHHGAFDLSFLLCVPNLVVMAPSDENECRQMLYT-AYRHNGP 467

Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
              RYPRG  +    P      + IGKG++   GK  ALL +G+++ N L+A   L    
Sbjct: 468 TAVRYPRGGGLGVT-PETAMSELPIGKGEIRRRGKKTALLVFGSLLGNALQAAEQL---- 522

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-IGGFGSHVSHFIALDGLLDSGVK 672
            D TVA+ RF KPLD +L+ EL  +H  L+T+EE + IGG GS V+  +         + 
Sbjct: 523 -DATVANMRFVKPLDAELIEELAMSHDLLVTIEENAVIGGAGSEVARLV-------ESLP 574

Query: 673 WRPIV----LPDNYIEHASPTQQLALAGL 697
            RP V    LPD++++H   TQ     GL
Sbjct: 575 QRPRVLRLGLPDHFVDHGDQTQLHEQVGL 603


>gi|224825911|ref|ZP_03699015.1| deoxyxylulose-5-phosphate synthase [Pseudogulbenkiania ferrooxidans
           2002]
 gi|224602135|gb|EEG08314.1| deoxyxylulose-5-phosphate synthase [Pseudogulbenkiania ferrooxidans
           2002]
          Length = 618

 Score =  454 bits (1167), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 265/637 (41%), Positives = 385/637 (60%), Gaps = 40/637 (6%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+LD +  P  LK L   EL QLA E+R  L   VSKT     S+L ++ELT+ALH+VF 
Sbjct: 3   PLLDTINYPADLKRLARHELPQLAGELRQFLVESVSKTGGHFASNLGSIELTIALHYVFD 62

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG QTY HKILTGRRS++HT+R+K G++G+  R ESEYD F  GH   S+S
Sbjct: 63  TPHDRLVWDVGHQTYPHKILTGRRSMMHTMRQKGGLAGFPKREESEYDTFGVGHSSTSIS 122

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           A LGMA A   +G     V +I +G   AGQA+EA++NAG +D +M+VILND+  S+ P 
Sbjct: 123 AALGMAAAAKAQGIERKSVAIIGDGAMTAGQAFEALNNAGAMDLDMLVILNDNDMSISP- 181

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRG--MHEWAAKVDEYARGMI 317
                  ++ AL++ L+++ S + +  +++   G +K +G    + E A+KV+E+ +GM 
Sbjct: 182 -------NVGALNNYLAKLMSGRFYAAMKQ---GSSKVLGIAPPLREIASKVEEHVKGMF 231

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN---RRAED 374
            P   TLFEE G  YIGP+DGH+++ L+  L+ + SL   GP  +H+VT++    + AE+
Sbjct: 232 TP--GTLFEEFGFNYIGPIDGHDLDVLVDTLKNIKSL--KGPQFLHIVTKKGQGYKLAEN 287

Query: 375 TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
              +     + + A+  +    G+   +Y   F + +   A+ D  +V +   M     L
Sbjct: 288 DPVAYHGVTKFDPANGLSGGKSGSSKPSYTQIFGDWICDMAKHDTRLVGITPAMREGSGL 347

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F+++ P+RYFDV +AEQHAVTF+AGLAC G+KP   I S FLQR YDQ+++DV  Q L
Sbjct: 348 VRFEKEHPDRYFDVAIAEQHAVTFAAGLACDGMKPVVAIYSTFLQRGYDQLIHDVALQNL 407

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PV F I  AGLVG+DGPT  GAFDI+++ C+PNM VMAPSDE+E   M+ T  ++ D P 
Sbjct: 408 PVVFAIDRAGLVGADGPTHAGAFDISYLRCIPNMTVMAPSDENECRQMLYTAFTL-DTPT 466

Query: 555 CFRYPR----GAIVRTDLPGYRGIPIEIGKGKVLVEGKD-VALLGYGAMVQNCLKARALL 609
             RYPR    GA ++ ++       + IG+G +  +G+  VA+L +G+MV   L+A    
Sbjct: 467 AVRYPRGTGPGAHIQHEMSA-----LPIGRGHIRRQGQGRVAILAFGSMVTPALQAAE-- 519

Query: 610 SKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLD 668
                D TVAD RF KPLD  L++ L ++H  ++TVEE  + GG GS     I   G+  
Sbjct: 520 ---AFDATVADMRFVKPLDTGLIKSLAESHELIVTVEENVVMGGAGSACVEAIEAQGITA 576

Query: 669 SGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAAT 705
             ++   + LPD+Y+EH  P   LA  GL    I A+
Sbjct: 577 PVLQ---LGLPDDYVEHGDPALLLADCGLDAKGIEAS 610


>gi|394988075|ref|ZP_10380913.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sulfuricella denitrificans
           skB26]
 gi|393792533|dbj|GAB70552.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sulfuricella denitrificans
           skB26]
          Length = 623

 Score =  454 bits (1167), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 261/627 (41%), Positives = 385/627 (61%), Gaps = 40/627 (6%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L+ + +P  L++L  ++L QLA E+R+ L   VSK+   L S+L AVELT+ALH+VF+ 
Sbjct: 7   LLEAINDPAELRALERRQLPQLAEELRTFLIESVSKSGGHLASNLGAVELTIALHYVFNT 66

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+++WDVG QTY HKILTGRR  + TLR+  GI+G+  R+ESEYD F AGH   S+SA
Sbjct: 67  PDDRLVWDVGHQTYTHKILTGRREAMATLRQLGGIAGFPKRAESEYDAFGAGHSSTSISA 126

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKI 260
            LGMAVA   +G     V +I +G    G A+EA++NAG +D+N++V+LND+  S+    
Sbjct: 127 ALGMAVAAQAEGSDRRAVAIIGDGAMTGGMAFEALNNAGAMDANLLVVLNDNDMSI---- 182

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGR--GMHEWAAKVDEYARGMIG 318
                 ++ AL++ L+++ S + +  +R   KG  K +G    + E A + +E+ +GM+ 
Sbjct: 183 ----SENVGALNNYLAKLMSGRFYSAMR---KGGEKVLGAVPPILELAKRAEEHMKGMVI 235

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR----RAED 374
           P   TLFEE G  YIGP+DGH+++ L++ L  +  L   GP L+H+ T++ +      ED
Sbjct: 236 P--GTLFEEFGFNYIGPIDGHDLDVLVTTLSNLKHL--QGPQLLHIATQKGKGYKLAEED 291

Query: 375 TQKSEAIEK--QQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
                 + K   ++G SD+   P G    TY   F + L   A +DK +V +   M    
Sbjct: 292 PCLYHGVAKFNPEDGVSDAK--PGGKL--TYTQVFGDWLCDMAAQDKRLVGITPAMCEGS 347

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            +  F  ++P+RYFDVG+AEQHA+TF+AG+AC G+KP   I S FLQRAYDQ+++D+  Q
Sbjct: 348 GMVRFAREYPKRYFDVGIAEQHALTFAAGIACEGMKPVVAIYSTFLQRAYDQLIHDIALQ 407

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
            LP+   I  AGLVG+DGPT  G+FD++F+ C+PN++VMAPSDE+E   M+ T A + + 
Sbjct: 408 GLPIVLAIDRAGLVGADGPTHAGSFDLSFLRCVPNLLVMAPSDENECRQMLYT-AFMHNG 466

Query: 553 PVCFRYPRGAIVRTDLPG-YRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSK 611
           P   RYPRG+ +   +    + +P  IGKG+V  EG+ +A+L +G+M+   L A   L  
Sbjct: 467 PSAVRYPRGSGMGVAIQQEMQALP--IGKGEVRREGEKIAILAFGSMLAPALAAAEELKA 524

Query: 612 LGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSG 670
                TVA+ RF KPLD +L   L Q H  L+TVEE ++ GG GS V  F+   G+    
Sbjct: 525 -----TVANMRFVKPLDEELTLRLAQTHDLLVTVEENAVMGGAGSAVLEFLESKGVT--- 576

Query: 671 VKWRPIVLPDNYIEHASPTQQLALAGL 697
           V+   + LPD ++EH  P + LA  GL
Sbjct: 577 VQVLQLGLPDRFVEHGDPVKLLASCGL 603


>gi|194290325|ref|YP_002006232.1| 1-deoxy-d-xylulose-5-phosphate synthase [Cupriavidus taiwanensis
           LMG 19424]
 gi|229813270|sp|B3R5H4.1|DXS_CUPTR RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|193224160|emb|CAQ70169.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein,
           thiamin-binding [Cupriavidus taiwanensis LMG 19424]
          Length = 638

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 268/640 (41%), Positives = 378/640 (59%), Gaps = 56/640 (8%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L+ ++ P  L+ L  +EL+ LA E+R+ +   VS+T   L S+L  VELT+ALH+VF+ 
Sbjct: 5   LLNKIDAPADLRKLDRRELQTLADELRAYVLESVSQTGGHLSSNLGTVELTIALHYVFNT 64

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+++WDVG Q+Y HKILTGRR  + TLR+  GISG+  RSESEYD F   H   S+SA
Sbjct: 65  PDDRLVWDVGHQSYPHKILTGRRERMRTLRQWGGISGFPRRSESEYDTFGTAHSSTSISA 124

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAG-YLDSNMIVILNDSRHSLHPK 259
            LGMA+     G++   V VI +G   AG A+EA++NAG Y D  ++V+LND+  S+ P 
Sbjct: 125 ALGMALGARTLGQKRVSVAVIGDGAMTAGMAFEALNNAGVYKDLPLVVVLNDNDMSISP- 183

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTK--RIGRGMHEWAAKVDEYARGMI 317
                   + AL+  L+R+ S + +   +   KG+ K   +   + E+A + +E+A+GM+
Sbjct: 184 -------PVGALNRHLARLLSGQFYAATK---KGIEKVLSVAPPVLEFAKRFEEHAKGMM 233

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEV--ASLGSMGPVLVHVVTEENRRAEDT 375
            P  +TLFEE G  YIGP+DGH++  L+  LQ +   +L   GP  +HVVT   ++ +  
Sbjct: 234 VP--ATLFEEFGFNYIGPIDGHDLNSLVPTLQNIRERALEGGGPQFLHVVT---KKGQGY 288

Query: 376 QKSEAIEKQQEGASDSNSL----PFGNYSR-TYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
           + +EA      G    N      P    +R TY   F + L   A  DK +V +   M  
Sbjct: 289 KLAEADPILYHGPGKFNPAEGIRPAAKPARKTYTQVFGDWLCDMAAADKRLVGITPAMRE 348

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              +  F+++FP+RY+DVG+AEQHAVTF+ GLAC GLKP   I S FLQR YDQ+++DV 
Sbjct: 349 GSGMVEFEKRFPDRYYDVGIAEQHAVTFAGGLACEGLKPVVAIYSTFLQRGYDQLIHDVA 408

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q LPV F +  AGLVG+DG T  GA+DI ++ C+PNM+VM PSDE+E   ++ T A   
Sbjct: 409 LQNLPVVFALDRAGLVGADGATHAGAYDIAYLRCIPNMMVMTPSDENECRQLL-TTAFQQ 467

Query: 551 DRPVCFRYPR----GAIVRTDLPGYRGIPIEIGKGKVLVE-----GKDVALLGYGAMVQN 601
           D P   RYPR    GA +  DL      P+ +GKG V  E     G  V  L +G+MVQ 
Sbjct: 468 DCPTAVRYPRGSGPGAAIAADL-----APVPVGKGVVRREAGARAGHRVGFLAFGSMVQP 522

Query: 602 CLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHF 660
            L A   L     D TVAD RF KPLD+ LV+ L  +H +L+TVEEGS+ GG GS V   
Sbjct: 523 ALGAAEAL-----DATVADMRFVKPLDVALVKRLAADHDYLVTVEEGSVMGGAGSAV--- 574

Query: 661 IALDGLLDSGVKWRPIV---LPDNYIEHASPTQQLALAGL 697
             L+ L ++G+  +P++   LPD +++H  P   L   GL
Sbjct: 575 --LEALAEAGID-KPVLTLGLPDRFVDHGDPAFLLQQCGL 611


>gi|299533200|ref|ZP_07046584.1| 1-deoxy-D-xylulose-5-phosphate synthase [Comamonas testosteroni
           S44]
 gi|298718730|gb|EFI59703.1| 1-deoxy-D-xylulose-5-phosphate synthase [Comamonas testosteroni
           S44]
          Length = 622

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 259/634 (40%), Positives = 380/634 (59%), Gaps = 36/634 (5%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L  + +P  ++ L+  +LK LA E+R+ +   VS+T   L S+L  VELTVALH VF+ 
Sbjct: 8   LLHNINDPADMRGLSRSQLKSLAAELRTYVIDSVSRTGGHLSSNLGTVELTVALHSVFNT 67

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+I+WDVG QTY HKILTGRR  + TLR+  G+SG+  R+ESEYD F   H   S+SA
Sbjct: 68  PYDRIVWDVGHQTYPHKILTGRRDRMGTLRQFGGLSGFPQRAESEYDTFGTAHSSTSISA 127

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKI 260
            LGMA+A   KG+    + VI +G   AG A+EA++N G  D+N++VILND+  S+ P  
Sbjct: 128 ALGMALAAKQKGEDRRAIAVIGDGAMTAGMAFEALNNGGVHDANLLVILNDNDMSISP-- 185

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQ 320
                  + AL+  L+++ S + + + R+V K + K++   + E A ++++ A+GM+ P 
Sbjct: 186 ------PVGALNRYLAQLMSGQFYAKARDVGKSVLKQV-PPLLELAKRLEQQAKGMVVP- 237

Query: 321 GSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSEA 380
            +T+FE+ G  YIGP+DGH+++ LI  L+ +  L   GP  +HVVT   ++ +  + +EA
Sbjct: 238 -ATMFEQFGFNYIGPIDGHDLDSLIPTLENIKGL--KGPQFLHVVT---KKGQGYKLAEA 291

Query: 381 IEKQQEGASDSNSL-----PFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQ 435
                 G    +       P     +T+   F   L   A KD+ +V +   M     + 
Sbjct: 292 DPVAYHGPGKFDPAVGLVKPATPAKQTFTQVFGHWLCDMAAKDQRLVGITPAMREGSGMV 351

Query: 436 LFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLP 495
            F ++FP RY+DVG+AEQHAVTF+ G+AC G+KP   I S FLQRAYDQ+++DV  Q LP
Sbjct: 352 EFHKRFPGRYYDVGIAEQHAVTFAGGMACEGVKPVVAIYSTFLQRAYDQLIHDVALQNLP 411

Query: 496 VRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVC 555
           V F +  AGLVG+DG T  GA+DI F+ C+PNM +  P+DE E   ++ T A   D PVC
Sbjct: 412 VVFALDRAGLVGADGATHAGAYDIAFVRCIPNMSMACPADERETRQLL-TTAYEQDHPVC 470

Query: 556 FRYPRGAIVR-TDLPGYRGIPIEIGKGKVLVE--GKDVALLGYGAMVQNCLKARALLSKL 612
            RYPRGA V  T L    G+P   GKG++  E   K VA+L +G+++   L+A   L   
Sbjct: 471 VRYPRGAGVGVTPLESLEGLP--FGKGEMRRESASKKVAILAFGSLLYPALQAAEAL--- 525

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGV 671
             D +VA+ R+ KPLD +L+ ++  +H  ++T+EEG + GG GS V   +A  GL  S +
Sbjct: 526 --DASVANMRWAKPLDEELLLQIAADHELIVTLEEGCVMGGAGSAVMESLAAHGLSKSVL 583

Query: 672 KWRPIVLPDNYIEHASPTQQLALAGLTGHHIAAT 705
           +   + LPD +IEH  P + LAL GL    I A+
Sbjct: 584 Q---LGLPDEFIEHGDPAKLLALQGLDAAGIEAS 614


>gi|264679658|ref|YP_003279565.1| deoxyxylulose-5-phosphate synthase [Comamonas testosteroni CNB-2]
 gi|262210171|gb|ACY34269.1| deoxyxylulose-5-phosphate synthase [Comamonas testosteroni CNB-2]
          Length = 622

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 259/634 (40%), Positives = 380/634 (59%), Gaps = 36/634 (5%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L  + +P  ++ L+  +LK LA E+R+ +   VS+T   L S+L  VELTVALH VF+ 
Sbjct: 8   LLHNINDPADMRGLSRSQLKSLAAELRTYVIDSVSRTGGHLSSNLGTVELTVALHSVFNT 67

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+I+WDVG QTY HKILTGRR  + TLR+  G+SG+  R+ESEYD F   H   S+SA
Sbjct: 68  PYDRIVWDVGHQTYPHKILTGRRDRMGTLRQFGGLSGFPQRAESEYDTFGTAHSSTSISA 127

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKI 260
            LGMA+A   KG+    + VI +G   AG A+EA++N G  D+N++VILND+  S+ P  
Sbjct: 128 ALGMALAAKQKGEDRRAIAVIGDGAMTAGMAFEALNNGGVHDANLLVILNDNDMSISP-- 185

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQ 320
                  + AL+  L+++ S + + + R+V K + K++   + E A ++++ A+GM+ P 
Sbjct: 186 ------PVGALNRYLAQLMSGQFYAKARDVGKSVLKQV-PPLLELAKRLEQQAKGMVVP- 237

Query: 321 GSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSEA 380
            +T+FE+ G  YIGP+DGH+++ LI  L+ +  L   GP  +HVVT   ++ +  + +EA
Sbjct: 238 -ATMFEQFGFNYIGPIDGHDLDSLIPTLENIKGL--KGPQFLHVVT---KKGQGYKLAEA 291

Query: 381 IEKQQEGASDSNSL-----PFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQ 435
                 G    +       P     +T+   F   L   A KD+ +V +   M     + 
Sbjct: 292 DPVAYHGPGKFDPAVGLVKPATPAKQTFTQVFGHWLCDMAAKDQRLVGITPAMREGSGMV 351

Query: 436 LFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLP 495
            F ++FP RY+DVG+AEQHAVTF+ G+AC G+KP   I S FLQRAYDQ+++DV  Q LP
Sbjct: 352 EFHKRFPGRYYDVGIAEQHAVTFAGGMACEGVKPVVAIYSTFLQRAYDQLIHDVALQNLP 411

Query: 496 VRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVC 555
           V F +  AGLVG+DG T  GA+DI F+ C+PNM +  P+DE E   ++ T A   D PVC
Sbjct: 412 VVFALDRAGLVGADGATHAGAYDIAFVRCIPNMSMACPADERETRQLL-TTAYEQDHPVC 470

Query: 556 FRYPRGAIVR-TDLPGYRGIPIEIGKGKVLVE--GKDVALLGYGAMVQNCLKARALLSKL 612
            RYPRGA V  T L    G+P   GKG++  E   K VA+L +G+++   L+A   L   
Sbjct: 471 VRYPRGAGVGVTPLESLEGLP--FGKGEMRRESASKKVAILAFGSLLYPALQAAEAL--- 525

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGV 671
             D +VA+ R+ KPLD +L+ ++  +H  ++T+EEG + GG GS V   +A  GL  S +
Sbjct: 526 --DASVANMRWAKPLDEELLLQIAADHELIVTLEEGCVMGGAGSAVMESLAAHGLSKSVL 583

Query: 672 KWRPIVLPDNYIEHASPTQQLALAGLTGHHIAAT 705
           +   + LPD +IEH  P + LAL GL    I A+
Sbjct: 584 Q---LGLPDEFIEHGDPAKLLALQGLDAAGIEAS 614


>gi|120610695|ref|YP_970373.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidovorax citrulli
           AAC00-1]
 gi|166198591|sp|A1TNR1.1|DXS_ACIAC RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|120589159|gb|ABM32599.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidovorax citrulli
           AAC00-1]
          Length = 622

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 256/626 (40%), Positives = 375/626 (59%), Gaps = 36/626 (5%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+L  V +P  L+ ++  +LK+LA E+R+ +   VSKT   L S+L  VELTVALH VF 
Sbjct: 7   PLLQTVNDPADLRRMSRAQLKELAAELRAFVLDSVSKTGGHLSSNLGTVELTVALHTVFD 66

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG QTY HKILTGRR  + TLR+  G+SG+  R+ESEYD F   H   S+S
Sbjct: 67  TPRDRLVWDVGHQTYPHKILTGRRDRMPTLRQLGGLSGFPQRTESEYDTFGTAHSSTSIS 126

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           A LGMA+A   +G+    V +I +G   AG A+EA++NAG  D+N++VILND+  S+ P 
Sbjct: 127 AALGMAMAARQRGEDRRAVAIIGDGAMTAGMAFEALNNAGVADANLLVILNDNDMSISP- 185

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                   + AL+  L+++ S + +   + V K +   +   + E A + ++ A+GM+ P
Sbjct: 186 -------PVGALNRYLAQLMSGQFYAAAKNVGKTVLGPV-PPLLELAKRFEQQAKGMVLP 237

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             +TLFE+ G  YIGP+DGH+++ LI  L+ +  L   GP  +HVVT++  +     +++
Sbjct: 238 --ATLFEKFGFNYIGPIDGHDLDSLIPTLENIKGL--KGPQFLHVVTKKG-QGYKLAEAD 292

Query: 380 AIEKQQEGASDSN---SLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQL 436
            +     G  D +   + P     +T+   F + L   A +D  +V +   M     +  
Sbjct: 293 PVAYHGPGKFDPSVGLTKPATPPKQTFTQVFGQWLCDMAAQDDRLVGITPAMREGSGMVE 352

Query: 437 FQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPV 496
           F+++FP RY+DVG+AEQHAVTF+AG+AC G+KP   I S FLQRAYDQ+++DV  Q LPV
Sbjct: 353 FEKRFPGRYYDVGIAEQHAVTFAAGMACEGVKPVVAIYSTFLQRAYDQLIHDVALQNLPV 412

Query: 497 RFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCF 556
            F +  AGLVG+DG T  GA+DI F+ C+PNM +  P+DE E   +++T A   D PV  
Sbjct: 413 VFALDRAGLVGADGATHAGAYDIPFVRCIPNMSIACPADERECRQLLST-AYAQDHPVAV 471

Query: 557 RYPRGAIVR-TDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGID 615
           RYPRG+      LPG  G+P   GKG+V   G+ +A+L +G ++   L+A   L     D
Sbjct: 472 RYPRGSGAGVAPLPGLEGLP--FGKGEVRRTGQRIAILAFGTLLYPALQAGETL-----D 524

Query: 616 VTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVKWR 674
            TVA+ R+ KPLD  L+ E+   H  L+TVEEG++ GG GS V   +   G+       +
Sbjct: 525 ATVANMRWAKPLDTALLLEIAAGHDALVTVEEGAVLGGAGSAVCEALNAAGI------QK 578

Query: 675 PIV---LPDNYIEHASPTQQLALAGL 697
           P++   LPD +IEH  P + LAL GL
Sbjct: 579 PVLQLGLPDVFIEHGDPARLLALQGL 604


>gi|419839194|ref|ZP_14362612.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus haemolyticus
           HK386]
 gi|386909905|gb|EIJ74569.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus haemolyticus
           HK386]
          Length = 621

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 259/624 (41%), Positives = 370/624 (59%), Gaps = 34/624 (5%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+L L+ +P  L+ L   +L QL  E+R  L   VS+T   L S L  VELTVALH+V+ 
Sbjct: 5   PLLSLINSPEDLRLLNKDQLPQLCQELRGYLLESVSQTSGHLASGLGTVELTVALHYVYK 64

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG Q Y HKILTGRR  + T+R+KDGI  +  R ESE+D  + GH   S+S
Sbjct: 65  TPFDQLIWDVGHQAYPHKILTGRRDQMSTIRQKDGIHPFPWREESEFDVLSVGHSSTSIS 124

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           AGLG+AVA + +      V VI +G   AG A+EA+++AG + ++M+VILND+  S+   
Sbjct: 125 AGLGIAVAAERENASRKTVCVIGDGAITAGMAFEALNHAGSVHTDMLVILNDNEMSI--- 181

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                  ++ AL++ L+RI S   +  LR+ +K +  ++   +  +  K +E+ +G++  
Sbjct: 182 -----SENVGALNNHLARIFSGSIYSTLRDGSKKILDKV-PPVKNFMKKTEEHMKGVMFS 235

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             STLFEELG  YIGPVDGHNI++L++ L  + +L   GP  +H+ T++ +     +K  
Sbjct: 236 PESTLFEELGFNYIGPVDGHNIDELVATLTNMRNL--KGPQFLHIKTKKGKGYAPAEKDP 293

Query: 380 -AIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQ 438
                  +    S  LP  N   TY   F + L   AEKD  I+ +   M     +  F 
Sbjct: 294 IGFHGVPKFDPISGELPKHNTKPTYSKIFGDWLCEMAEKDSKIIGITPAMREGSGMVEFS 353

Query: 439 EKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRF 498
           ++FPE+YFDV +AEQHAVTF+ GLA GG KP   I S FLQRAYDQ+++DV  Q LPV F
Sbjct: 354 QRFPEQYFDVAIAEQHAVTFATGLAIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPVLF 413

Query: 499 VITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRY 558
            I  AG+VG+DGPT  GAFD++FM C+PNMI+M PSDE+E   M+ T      +P   RY
Sbjct: 414 AIDRAGIVGADGPTHQGAFDLSFMRCIPNMIIMTPSDENECRQMLYTGYQC-GKPAAVRY 472

Query: 559 PRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTV 618
           PRG  +  +L     +P  IGK +++ EG+ +A+L +G ++ + L+A   L     + TV
Sbjct: 473 PRGNAIGVELTPLEMLP--IGKSRLIREGQKIAILNFGTLLPSALEASEKL-----NATV 525

Query: 619 ADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG----LLDSGVKW 673
            D RF KP+DI+++  L Q H +L+T+EE +I GG GS V+  +   G    LL  G   
Sbjct: 526 VDMRFVKPIDIEMINVLAQTHDYLVTLEENAIQGGAGSAVAEVLNSSGKSTALLQLG--- 582

Query: 674 RPIVLPDNYIEHASPTQQLALAGL 697
               LPD +I  A  TQQ AL  L
Sbjct: 583 ----LPDYFIPQA--TQQEALKDL 600


>gi|83717976|ref|YP_438814.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia thailandensis
           E264]
 gi|167615333|ref|ZP_02383968.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia thailandensis
           Bt4]
 gi|257141898|ref|ZP_05590160.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia thailandensis
           E264]
 gi|118595498|sp|Q2T7N5.1|DXS_BURTA RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|83651801|gb|ABC35865.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia thailandensis
           E264]
          Length = 634

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 273/641 (42%), Positives = 382/641 (59%), Gaps = 46/641 (7%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L  +++P  L+ L  ++L+ LA E+R+ +   VSKT   L S+L  VELT+ALH+VF+ 
Sbjct: 4   LLKTIDDPADLRRLDRRQLQPLADELRAFVLDSVSKTGGHLSSNLGTVELTIALHYVFNT 63

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+I+WDVG QTY HKILTGRR  + TLR+ DGISG+  RSESEYD F   H   S+SA
Sbjct: 64  PDDRIVWDVGHQTYPHKILTGRRDGMKTLRQFDGISGFPRRSESEYDTFGTAHSSTSISA 123

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPK 259
            LGMA+   + G     + VI +G   AG A+EAM+NAG   D+ ++VILND+  S+ P 
Sbjct: 124 ALGMAIGSKLNGDDRFSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDNDMSISP- 182

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                   + AL+  L+R+ S + +   R   + +   +   + E A K++E+A+GM+ P
Sbjct: 183 -------PVGALNRHLARLMSGRFYAAARAGVERVLS-VAPPVLELARKLEEHAKGMVVP 234

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             +TLFEE G  YIGP+DGH+++ LI  LQ +  L   GP  +HVVT   ++ +  + +E
Sbjct: 235 --ATLFEEFGFNYIGPIDGHDLDSLIPTLQNIKEL--RGPQFLHVVT---KKGQGYKLAE 287

Query: 380 AIEKQQEGASDSNSL----PFGNYS-RTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
           A      G    N      P    + +TY   F E L   AE D  +V +   M     +
Sbjct: 288 ADPVLYHGPGKFNPAEGIKPSATPAKKTYTQVFGEWLCDAAELDARVVGITPAMREGSGM 347

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F+++FPERY+DVG+AEQHAVTF+ GLA  GLKP   I S FLQRAYDQ+++DV  Q L
Sbjct: 348 VEFEKRFPERYYDVGIAEQHAVTFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNL 407

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PV F I  AGLVG+DG T  GA+D+ F+ C+PNM VMA SDE+E   M+ T A     P 
Sbjct: 408 PVVFAIDRAGLVGADGATHAGAYDLAFLRCIPNMTVMAASDENECRQMLHT-ALQQPNPT 466

Query: 555 CFRYPRGAIVR-TDLPGYRGIPIEIGKGKVL-----VEGKDVALLGYGAMVQNCLKARAL 608
             RYPRGA      +  +  IP  +GKG+V       +GK VA+L +G MV     A +L
Sbjct: 467 AVRYPRGAGTGVATVKAFTEIP--LGKGEVRRRTSQPDGKRVAILAFGTMV-----APSL 519

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLL 667
            +   +D TVA+ RF KP+D +LVREL Q H +L+TVEEG + GG GS       ++ ++
Sbjct: 520 AAADALDATVANMRFVKPIDAELVRELAQTHDYLVTVEEGCVMGGAGS-----ACVEAMM 574

Query: 668 DSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAAT 705
           + G   RP++   LPD +++H  P + LA+ GL G  IA +
Sbjct: 575 EGGA-VRPVLQLGLPDRFVDHGDPAKLLAMCGLDGDGIAKS 614


>gi|345864102|ref|ZP_08816307.1| 1-deoxy-D-xylulose-5-phosphate synthase [endosymbiont of Tevnia
           jerichonana (vent Tica)]
 gi|345124820|gb|EGW54695.1| 1-deoxy-D-xylulose-5-phosphate synthase [endosymbiont of Tevnia
           jerichonana (vent Tica)]
          Length = 636

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 255/619 (41%), Positives = 369/619 (59%), Gaps = 24/619 (3%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L+ V+ P  L+ L  K+L  LA+E+R  L   VS+T   L + L  VELT+ALH+VF+ 
Sbjct: 15  LLEQVDLPQDLRRLEPKQLPLLALELRRFLIESVSRTGGHLAAGLGVVELTIALHYVFNT 74

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+++WDVG Q Y HKILTGRR  +  LR++ G SG+  RSES+YD F  GH   S+SA
Sbjct: 75  PQDRLIWDVGHQAYPHKILTGRREQMAKLRQQGGPSGFPKRSESDYDTFGTGHSSTSISA 134

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKI 260
            LGMAVA   KG+   +V VI +G+  AG A+EA+++AG LD +++V+LND++ S+    
Sbjct: 135 ALGMAVAARRKGESRKVVAVIGDGSIGAGMAFEALNHAGVLDQDLLVVLNDNKMSI---- 190

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQ 320
                  + A S+ LSR+ S   +  +RE  K +   +   + E   + +E+ +GM+ P 
Sbjct: 191 ----SKPVGAFSNHLSRLLSGTLYTGMREGGKSLLSHLPSQVSELMGRWEEHMKGMVLP- 245

Query: 321 GSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE- 379
             T+FEELG  YIGP+DGH+++ L+  L+ ++ L   GP L+HVVT++ R  E  ++S  
Sbjct: 246 -GTMFEELGFNYIGPIDGHDLDTLVPTLRNMSKLS--GPCLLHVVTQKGRGYEPAEESPI 302

Query: 380 AIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQE 439
           A          +  +  G    +Y   F + L   AEKD+ ++ +   M     +  F  
Sbjct: 303 AYHGVTPFNPATGEMTKGGGGPSYTQIFGDWLCATAEKDERLLAITPAMCEGSGMVEFAR 362

Query: 440 KFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFV 499
           +FP+RYFDVG+AEQHA+T +AG+AC G KP   I S+FLQRAYDQ+++DV  Q L V   
Sbjct: 363 RFPKRYFDVGIAEQHALTLAAGMACEGAKPVVAIYSSFLQRAYDQLIHDVVLQNLDVTLA 422

Query: 500 ITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYP 559
           +  AG VG+DG T  G+FD+++   LPNM++MAPSDE+E   M+ T       P   RYP
Sbjct: 423 VDRAGQVGADGATHAGSFDLSYARVLPNMLIMAPSDENECSRMLQTAYDYPG-PAMVRYP 481

Query: 560 RGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVA 619
           RG     ++      P+E+G+G++  EG  VALL +G+++Q  L A   L     D TVA
Sbjct: 482 RGGGTGAEVE-QPAKPLELGQGRLRREGCRVALLSFGSLLQTALAAAEQL-----DATVA 535

Query: 620 DARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVKWRPIVL 678
           D RF KPLD  LV +L   H  L+T+EE  + GG GS V+ ++A  G     V+   + L
Sbjct: 536 DMRFVKPLDEALVLDLASRHELLVTLEENQVQGGAGSAVNEYLAHIG---HSVRLLNLGL 592

Query: 679 PDNYIEHASPTQQLALAGL 697
           PD +I HA+  QQLA  GL
Sbjct: 593 PDRFIHHATQQQQLAECGL 611


>gi|167577163|ref|ZP_02370037.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia thailandensis
           TXDOH]
          Length = 634

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 273/641 (42%), Positives = 382/641 (59%), Gaps = 46/641 (7%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L  +++P  L+ L  ++L+ LA E+R+ +   VSKT   L S+L  VELT+ALH+VF+ 
Sbjct: 4   LLKTIDDPADLRRLDRRQLQPLADELRAFVLDSVSKTGGHLSSNLGTVELTIALHYVFNT 63

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+I+WDVG QTY HKILTGRR  + TLR+ DGISG+  RSESEYD F   H   S+SA
Sbjct: 64  PDDRIVWDVGHQTYPHKILTGRRDGMKTLRQFDGISGFPRRSESEYDTFGTAHSSTSISA 123

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPK 259
            LGMA+   + G     + VI +G   AG A+EAM+NAG   D+ ++VILND+  S+ P 
Sbjct: 124 ALGMAIGSKLNGDDRFSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDNDMSISP- 182

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                   + AL+  L+R+ S + +   R   + +   +   + E A K++E+A+GM+ P
Sbjct: 183 -------PVGALNRHLARLMSGRFYAAARAGVERVLS-VAPPVLELARKLEEHAKGMVVP 234

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             +TLFEE G  YIGP+DGH+++ LI  LQ +  L   GP  +HVVT   ++ +  + +E
Sbjct: 235 --ATLFEEFGFNYIGPIDGHDLDSLIPTLQNIKEL--RGPQFLHVVT---KKGQGYKLAE 287

Query: 380 AIEKQQEGASDSNSL----PFGNYS-RTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
           A      G    N      P    + +TY   F E L   AE D  +V +   M     +
Sbjct: 288 ADPVLYHGPGKFNPAEGIKPSATPAKKTYTQVFGEWLCDAAELDARVVGITPAMREGSGM 347

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F+++FPERY+DVG+AEQHAVTF+ GLA  GLKP   I S FLQRAYDQ+++DV  Q L
Sbjct: 348 VEFEKRFPERYYDVGIAEQHAVTFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNL 407

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PV F I  AGLVG+DG T  GA+D+ F+ C+PNM VMA SDE+E   M+ T A     P 
Sbjct: 408 PVVFAIDRAGLVGADGATHAGAYDLAFLRCIPNMTVMAASDENECRQMLHT-ALQQPNPT 466

Query: 555 CFRYPRGAIVR-TDLPGYRGIPIEIGKGKVL-----VEGKDVALLGYGAMVQNCLKARAL 608
             RYPRGA      +  +  IP  +GKG+V       +GK VA+L +G MV     A +L
Sbjct: 467 AVRYPRGAGTGVATVKAFTEIP--LGKGEVRRRTSQPDGKRVAILAFGTMV-----APSL 519

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLL 667
            +   +D TVA+ RF KP+D +LVREL Q H +L+TVEEG + GG GS       ++ ++
Sbjct: 520 AAADALDATVANMRFVKPIDAELVRELAQTHDYLVTVEEGCVMGGAGS-----ACVEAMM 574

Query: 668 DSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAAT 705
           + G   RP++   LPD +++H  P + LA+ GL G  IA +
Sbjct: 575 EGGA-VRPVLQLGLPDRFVDHGDPAKLLAMCGLDGDGIAKS 614


>gi|434384302|ref|YP_007094913.1| 1-deoxy-D-xylulose-5-phosphate synthase [Chamaesiphon minutus PCC
           6605]
 gi|428015292|gb|AFY91386.1| 1-deoxy-D-xylulose-5-phosphate synthase [Chamaesiphon minutus PCC
           6605]
          Length = 636

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 258/634 (40%), Positives = 375/634 (59%), Gaps = 25/634 (3%)

Query: 82  LDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAP 141
           L  + +P +L  L++++L+Q+A+EIR +    V+ +   L   L  VELT+AL+      
Sbjct: 3   LSEITHPNQLHGLSVRQLEQIALEIREKHLQTVATSGGHLGPGLGVVELTLALYQTLDLD 62

Query: 142 VDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAG 201
            DK++WDVG Q Y HK++TGR +  HTLR+KDGI+GY  R ES++D F AGH   S+SA 
Sbjct: 63  RDKVVWDVGHQAYPHKLITGRYNRFHTLRQKDGIAGYLKRGESKFDHFGAGHASTSISAA 122

Query: 202 LGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPKI 260
           LGMA+ARD+KG+    V VI +G    G A EA+ +AG+L  +N++V+LND+  S+ P  
Sbjct: 123 LGMAIARDLKGENFKCVAVIGDGALTGGMALEAIDHAGHLPKTNLLVVLNDNEMSISP-- 180

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRI---GRGMHEWAAKVDEYARGMI 317
                 ++ A+   L++++ S   + L +  +   K I   G  +    A+V E  + + 
Sbjct: 181 ------NVGAIPRYLNKLRVSPPIQFLSDNIEEQLKHIPFVGESISPELARVKEGMKRLA 234

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRR---AED 374
            P+   +FEELG  YIGPVDGHN+E+LIS  +   +    GPV+VHV T + +    AE 
Sbjct: 235 VPKVGAVFEELGFTYIGPVDGHNLEELISTFE--GAHKHAGPVIVHVATTKGKGYAIAES 292

Query: 375 TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
            ++    +     A+  ++        TY   F + L+  AE D  IV + A M     L
Sbjct: 293 DREGYHAQSPFNLATGKSAPASKPKPPTYSKVFADTLIALAENDPRIVAITAAMGTGTGL 352

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             FQ K P+RY DVG+AEQHA+T +AGLA  G++P   I S FLQRA+DQ+V+D   Q L
Sbjct: 353 DKFQAKLPDRYVDVGIAEQHAITLAAGLATEGMRPVAAIYSTFLQRAFDQIVHDACIQHL 412

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PV   +  AG+VG+DGPT  G +DI ++ C+PNM++MAP DE EL  M+ T  +  D P+
Sbjct: 413 PVFLCLDRAGIVGADGPTHQGMYDIAYLRCIPNMVLMAPKDEGELQQMLVTGINYTDGPI 472

Query: 555 CFRYPRGAIVRTDL--PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
             RYPRG      L   G+  +P  IGK ++L EG DV ++ YG+MV   L+A  LLS+ 
Sbjct: 473 AMRYPRGNGYGVPLMDEGWEELP--IGKAEILREGDDVLMIAYGSMVHPTLQAAGLLSEH 530

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGV 671
           GI  TV +ARF KPLD +L   L ++   ++TVEEG + GGFGS ++  + +D  L+  V
Sbjct: 531 GISATVINARFAKPLDTELFAPLARSIGKVVTVEEGCLMGGFGSAIAESL-MD--LNVVV 587

Query: 672 KWRPIVLPDNYIEHASPTQQLALAGLTGHHIAAT 705
             + I +PD  +EHA+P + L   GLT   IA T
Sbjct: 588 PIKRIGVPDILVEHATPDESLGSLGLTSSQIAET 621


>gi|253699519|ref|YP_003020708.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter sp. M21]
 gi|251774369|gb|ACT16950.1| deoxyxylulose-5-phosphate synthase [Geobacter sp. M21]
          Length = 635

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 262/646 (40%), Positives = 379/646 (58%), Gaps = 40/646 (6%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L  +  P  LK L  +EL  LA E+R+ L   V++T   L S+L  VELT+ALH+ F +
Sbjct: 4   LLSKINGPADLKKLDAEELTPLAEEVRAFLLETVTRTGGHLASNLGTVELTIALHYCFDS 63

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P DKI+WDVG Q Y HKILTGRR   HT R   GISG+  R+ES +D F  GH   S+SA
Sbjct: 64  PKDKIIWDVGHQAYTHKILTGRRDSFHTQRCYKGISGFPKRAESPHDAFGVGHSSTSISA 123

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKI 260
           GLGMAVA+ +K     I++VI +G+   G A+EA++ AG+L  N+IV+LND+  S+    
Sbjct: 124 GLGMAVAQGLKEDAARIISVIGDGSLTGGMAFEALNQAGHLKKNLIVVLNDNEMSI---- 179

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKR---IGRGMHEWAAKVDEYARGMI 317
                 ++ ALSS +SR  +   +R L++  + +      IG  +  +A K +   +G +
Sbjct: 180 ----SKNVGALSSFISRKMTGGYYRSLKKEMEALMANIPAIGSNILHFAKKAENSLKGFL 235

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQK 377
            P   TLFE LG  Y+GP+ GH++  L+ VL+ V  L   GP+L+HV+T   ++ +    
Sbjct: 236 TP--GTLFEGLGFEYVGPIAGHDLPTLLGVLENVKRL--EGPILLHVMT---KKGKGYPP 288

Query: 378 SEAIEKQQEGASDS---NSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
           +E +  +  G + +   ++ P      +Y   F E +V   E D  I+ + A M     L
Sbjct: 289 AETMPDKFHGVAPTKPASASPTKRPPPSYTSVFGETMVKLGEVDPKILAITAAMPDGTGL 348

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F E+FP+R+FDVG+AEQHA+TF+AGLA  G +P   I S F QRAYDQV +D+  Q+L
Sbjct: 349 TPFAERFPDRFFDVGIAEQHALTFAAGLAVEGFRPVAAIYSTFTQRAYDQVFHDICLQKL 408

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PV   +  AGLVG DGPT  G+FDI+++  LP + VMAP DE+EL  M+ T A    RP+
Sbjct: 409 PVTLALDRAGLVGDDGPTHHGSFDISYLRHLPELTVMAPKDENELQHMLKT-ALYSGRPI 467

Query: 555 CFRYPRGAIVRTDLPGYRGIPIE-------IGKGKVLVEGKDVALLGYGAMVQNCLKARA 607
             RYPRGA       G+ G+P++       IGKG++L++G D+ ++  G+ V   L+A A
Sbjct: 468 SLRYPRGA-------GF-GVPLDQELQELPIGKGELLIDGGDLTIVAIGSTVHPALEAAA 519

Query: 608 LLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-IGGFGSHVSHFIALDGL 666
            L + GI  +V +ARF KP+D +L+    +    L+TVEE + +GGFGS V   I+  GL
Sbjct: 520 QLRQKGIFASVVNARFIKPIDSELILAQAKKTGCLVTVEENALLGGFGSAVLELISDAGL 579

Query: 667 LDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
             + V+ + I +PD +IE  +  Q  A  GL    IAAT  + L R
Sbjct: 580 --NAVRIKRIGIPDRFIEQGTQAQLRADLGLDAAGIAATCETFLKR 623


>gi|57234479|ref|YP_181480.1| 1-deoxy-D-xylulose-5-phosphate synthase [Dehalococcoides
           ethenogenes 195]
 gi|118595511|sp|Q3Z8G9.1|DXS_DEHE1 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|57224927|gb|AAW39984.1| 1-deoxy-D-xylulose-5-phosphate synthase [Dehalococcoides
           ethenogenes 195]
          Length = 647

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 261/643 (40%), Positives = 381/643 (59%), Gaps = 24/643 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           + +LD + +P  LK LT+ EL++LAV+IR EL + V+     L SSL  VELT+ALH VF
Sbjct: 16  SKLLDTINSPSDLKKLTLDELRELAVQIREELVNRVTLNGGHLASSLGVVELTIALHRVF 75

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
            +P DKI+WDVG Q+YAHK+LTGRR    TLR+  G+SG+T R ES +DPF AGH   S+
Sbjct: 76  ESPKDKIIWDVGHQSYAHKLLTGRREQFATLRQHGGLSGFTCRDESPHDPFGAGHASTSI 135

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVARD+  +   +++VI +G    G ++EA++NAG+L +  IVILND+  ++ P
Sbjct: 136 SAGLGMAVARDLAKEDYSVISVIGDGAISGGMSFEAINNAGHLHTKFIVILNDNGMAISP 195

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVD---EYARG 315
                   S  ALS  L+ ++    F   +  AK     +  G   WA       ++ + 
Sbjct: 196 --------STGALSKFLNNVRFDPRFEFAKRGAKQTITNMPFGKSVWAFTKSIKRKFEKS 247

Query: 316 MIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDT 375
           M+     +L+EELG  Y+GPVDGHNI +L + L+      S  PVL+H++T++ +  +D 
Sbjct: 248 ML---PGSLWEELGFIYLGPVDGHNIRELEAALKCAKDFESQ-PVLIHMITKKGKGYDDA 303

Query: 376 QKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQ 435
           + ++A+ K    A  S  L  G +  +Y   F + L      +  +V + A M     L 
Sbjct: 304 E-ADAV-KYHGIAPKSGGLKSG-HGLSYSQVFGQTLHKIMSDNPKVVAITAAMTDGCGLS 360

Query: 436 LFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLP 495
                FP+R FDVG+ EQHAVTF+AG+A  G  P  +I S FLQR++DQ+++DV  Q+LP
Sbjct: 361 EVAADFPDRVFDVGICEQHAVTFAAGMATQGYIPVVVIYSTFLQRSFDQIIHDVCLQKLP 420

Query: 496 VRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVC 555
           V F I   G+VG DG T  G FD++FMS +P+MIV APSDE++L  ++ T  +   +P  
Sbjct: 421 VVFAIDRGGIVGDDGKTHQGIFDLSFMSLIPDMIVTAPSDENDLQHLLYTAVN-SGKPFA 479

Query: 556 FRYPRGAIVRTDLPG-YRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGI 614
            RYPRG     +  G  R IP  IG+ +VL  G ++A+   G  V    +A  +L++ GI
Sbjct: 480 LRYPRGFGEGVETEGTLRNIP--IGENEVLASGSEIAIFATGKSVAFAKEAMEILAESGI 537

Query: 615 DVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVKW 673
             T+ + R+  PLD +L+ ++  NH +LITVEE  + GG GS ++  +A  GL+++ VK 
Sbjct: 538 KPTLVNNRYISPLDTELILKIAGNHKYLITVEENVLSGGLGSRINTILAEAGLVNA-VKI 596

Query: 674 RPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREA 716
             I +PD ++EH + +   A  GL G  IA   LSL+  T EA
Sbjct: 597 ANIAVPDKFVEHGNQSLLRAKYGLDGKGIAQKVLSLMANTGEA 639


>gi|326317941|ref|YP_004235613.1| deoxyxylulose-5-phosphate synthase [Acidovorax avenae subsp. avenae
           ATCC 19860]
 gi|323374777|gb|ADX47046.1| deoxyxylulose-5-phosphate synthase [Acidovorax avenae subsp. avenae
           ATCC 19860]
          Length = 622

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 258/640 (40%), Positives = 379/640 (59%), Gaps = 36/640 (5%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+L  V +P  L+ ++  +LK+LA E+R+ +   VSKT   L S+L  VELTVALH VF 
Sbjct: 7   PLLQTVNDPADLRRMSRAQLKELAAELRAFVLDSVSKTGGHLSSNLGTVELTVALHAVFD 66

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG QTY HKILTGRR  + TLR+  G+SG+  R+ESEYD F   H   S+S
Sbjct: 67  TPRDRLVWDVGHQTYPHKILTGRRDRMPTLRQLGGLSGFPQRTESEYDTFGTAHSSTSIS 126

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           A LGMA+A   +G+    V +I +G   AG A+EA++NAG  D++++VILND+  S+ P 
Sbjct: 127 AALGMALAARQRGEDRRAVAIIGDGAMTAGMAFEALNNAGVADADLLVILNDNDMSISP- 185

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                   + AL+  L+++ S   +   + V K + K +   + E A + ++ A+GM+ P
Sbjct: 186 -------PVGALNRYLAQLMSGHFYAAAKNVGKTVLKPV-PPLLELAKRFEQQAKGMVVP 237

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             +TLFE+ G  YIGP+DGH+++ LI  L+ +  L   GP  +HVVT++  +     +++
Sbjct: 238 --ATLFEKFGFNYIGPIDGHDLDSLIPTLENIKGL--KGPQFLHVVTKKG-QGYKLAEAD 292

Query: 380 AIEKQQEGASDSN---SLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQL 436
            +     G  D +   + P     +T+   F + L   A +D+ +V +   M     +  
Sbjct: 293 PVAYHGPGKFDPSVGITPPATPPKQTFTQVFGQWLCDMAAQDERLVGITPAMREGSGMVE 352

Query: 437 FQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPV 496
           F++ FP RY+DVG+AEQHAVTF+AG+AC G+KP   I S FLQRAYDQ+++DV  Q LPV
Sbjct: 353 FEKSFPGRYYDVGIAEQHAVTFAAGMACEGVKPVVAIYSTFLQRAYDQLIHDVALQNLPV 412

Query: 497 RFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCF 556
            F +  AGLVG+DG T  GA+DI F+ C+PNM +  P+DE E   +++T A   D PV  
Sbjct: 413 VFALDRAGLVGADGATHAGAYDIPFVRCIPNMSIACPADERECRQLLST-AYEQDHPVAV 471

Query: 557 RYPRGAIVR-TDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGID 615
           RYPRG+      LPG  G+P   GKG+V   G+ +A+L +G ++   L+A   L     D
Sbjct: 472 RYPRGSGAGVAPLPGLEGLP--FGKGEVRRAGQRIAILAFGTLLYPALQAAETL-----D 524

Query: 616 VTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVKWR 674
            TVA+ R+ KPLD  L+ E+   H  L+TVEEG++ GG GS V   +   G+       +
Sbjct: 525 ATVANMRWAKPLDTALLLEIAAGHDALVTVEEGAVLGGAGSAVCEALNAAGI------QK 578

Query: 675 PIV---LPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
           P++   LPD +IEH  P + LAL GL    I  +  +  G
Sbjct: 579 PVLQLGLPDVFIEHGDPARLLALQGLDAEGIVRSITARFG 618


>gi|288940188|ref|YP_003442428.1| deoxyxylulose-5-phosphate synthase [Allochromatium vinosum DSM 180]
 gi|288895560|gb|ADC61396.1| deoxyxylulose-5-phosphate synthase [Allochromatium vinosum DSM 180]
          Length = 634

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 266/649 (40%), Positives = 380/649 (58%), Gaps = 44/649 (6%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+LD +++P  L++L+  +L +LA E+RS L   VSKT   L + L  VELT+ LH+VF 
Sbjct: 17  PLLDSIDSPADLRALSESQLPELASELRSFLIECVSKTGGHLAAGLGVVELTLGLHYVFD 76

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG Q Y HKILTGRR  + TLR+KDGISG+  R ESEYD F  GH   S+S
Sbjct: 77  TPHDRLVWDVGHQAYPHKILTGRRDRMCTLRQKDGISGFPKRGESEYDTFGVGHSSTSIS 136

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           A LGMA+A   +G+R  ++ +I +G   AG A+EA+++AG +D +++VILND+  S+ P 
Sbjct: 137 AALGMALAAKQRGERRTVIAIIGDGALGAGMAFEALNHAGSMDIDLVVILNDNEMSISPP 196

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAK----GMTKRIGRGMHEWAAKVDEYARG 315
                   + A+S+ L+R+ S K +  +RE +K    GM +     +     + +E+ +G
Sbjct: 197 --------VGAISNHLARLLSGKLYTSVREGSKHALAGMPQ-----LRHLVGRWEEHMKG 243

Query: 316 MIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDT 375
           M+ P  STLFEELG  YIGPVDGH+++ L+  L+ +  +   G  L+H+VT++ R  E  
Sbjct: 244 MLMP--STLFEELGFNYIGPVDGHDMDGLLRTLRNIKDM--PGQRLLHIVTKKGRGFEPA 299

Query: 376 QKSEAIEK------QQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGME 429
           +    I        +Q G      L       TY   F   L   A  D  +V +   M 
Sbjct: 300 EGQPVIYHGVTPFDRQTG----QLLKAKGAGPTYTQIFGGWLHDTAAADPRLVGITPAMC 355

Query: 430 MDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDV 489
               L  F ++FPERYFDVG+AEQHAVT +AGLAC GLKP   I S+FLQRAYDQ+V+DV
Sbjct: 356 EGSGLTAFSKRFPERYFDVGIAEQHAVTLAAGLACEGLKPVVAIYSSFLQRAYDQLVHDV 415

Query: 490 DQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASI 549
             Q L V F +   GLVG+DG T  G FD++F   +PN+++M PS+E+E   M+ T    
Sbjct: 416 ALQNLDVTFAVDRGGLVGADGATHAGGFDLSFCRPIPNLVIMTPSNENECRRMLRTAYEY 475

Query: 550 DDRPVCFRYPRGAIVRTDL-PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARAL 608
           +  P   RYPRG      + P    +P  IG+G+++ EG  +ALL +G +V+  L+A  +
Sbjct: 476 EG-PALVRYPRGGGPGVAIDPNAPALP--IGRGEIVREGSRIALLAFGPLVKTALEAAEV 532

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLL 667
                 D TVAD RF KPLD  L+ +L   H  L+T+EE +I GG GS V+  ++  G++
Sbjct: 533 F-----DATVADMRFVKPLDAALILDLAARHEILVTLEENAIAGGAGSGVAELLSEQGVV 587

Query: 668 DSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREA 716
              +    + LPD YI+HA   +QLA  GL    I A+  + L R   A
Sbjct: 588 RRCLH---LGLPDRYIDHAEHHEQLASVGLDAPGIIASLQAELERHEHA 633


>gi|289432586|ref|YP_003462459.1| deoxyxylulose-5-phosphate synthase [Dehalococcoides sp. GT]
 gi|288946306|gb|ADC74003.1| deoxyxylulose-5-phosphate synthase [Dehalococcoides sp. GT]
          Length = 633

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 260/649 (40%), Positives = 379/649 (58%), Gaps = 38/649 (5%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           + +LD + +P  LK L++ EL++LAV+IR EL + V+     L SSL  VELT+ALH VF
Sbjct: 2   SKLLDTINSPSDLKKLSLDELRELAVQIREELVNRVTLNGGHLASSLGVVELTIALHRVF 61

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
            +P DKI+WDVG Q+YAHK+LTGRR    TLR+  G+SG+T R ES +DPF AGH   S+
Sbjct: 62  ESPKDKIIWDVGHQSYAHKLLTGRREQFATLRQHGGLSGFTCRDESPHDPFGAGHASTSI 121

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVARD+  +   +++VI +G    G ++EA++NAG+L +  IVILND+  ++ P
Sbjct: 122 SAGLGMAVARDLAKEDYSVISVIGDGAISGGMSFEAINNAGHLHTKFIVILNDNGMAISP 181

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVD---EYARG 315
                   S  ALS  L+ ++    F   +  AK     +  G   WA       ++ + 
Sbjct: 182 --------STGALSKFLNNVRFDPRFEFAKRNAKQTITNMPFGKAVWAFTKSIKRKFEKS 233

Query: 316 MIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDT 375
           M+     +L+EELG  Y+GPVDGHNI +L + L+      S  PVL+H++T++ +  +D 
Sbjct: 234 ML---PGSLWEELGFIYLGPVDGHNIRELEAALKRAKDFESK-PVLIHMITKKGKGYDDA 289

Query: 376 Q----KSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMD 431
           +    K   I  +  G   S+ L       +Y   F + L     ++  +V + A M   
Sbjct: 290 EADAVKYHGISPKSGGLKSSHGL-------SYSQVFGQTLHKIMSQNPQVVAITAAMTDG 342

Query: 432 LSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQ 491
             L      FP+R FDVG+ EQHAVTF+AG+A  G  P  +I S FLQR +DQ+++DV  
Sbjct: 343 CGLGEIAAAFPDRVFDVGICEQHAVTFAAGMATQGYIPVVVIYSTFLQRGFDQIIHDVCL 402

Query: 492 QRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDD 551
           Q+LPV F I   G+VG DG T  G FD++FMS +P+M+V APSDE++L  ++ T  +   
Sbjct: 403 QKLPVVFAIDRGGIVGDDGKTHQGIFDLSFMSLIPDMVVSAPSDENDLQHLIYTAVN-SG 461

Query: 552 RPVCFRYPR----GAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARA 607
           +P   RYPR    GA + + L     IP  IG+ ++LV G DVA+L  G  V     A  
Sbjct: 462 KPFALRYPRGFGEGAEIESSL---HNIP--IGQNEILVNGSDVAILATGKSVAFAKDALE 516

Query: 608 LLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGL 666
           +L++ GI  T+ + R+  PLD +LV ++ Q+H +L+TVEE  I GG GS ++  +A  GL
Sbjct: 517 ILTESGIKPTLVNNRYISPLDSELVLKIAQSHKYLVTVEENVISGGLGSRINTLLAEAGL 576

Query: 667 LDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTRE 715
           ++  +K   I +PD ++EH + +   A  GL G  IA   LSL+G   E
Sbjct: 577 VNK-IKIANIGIPDKFVEHGNQSLLRAKYGLDGKGIAQRVLSLVGNPNE 624


>gi|417842707|ref|ZP_12488788.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus haemolyticus
           M21127]
 gi|341951266|gb|EGT77843.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus haemolyticus
           M21127]
          Length = 625

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 258/639 (40%), Positives = 374/639 (58%), Gaps = 32/639 (5%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+L L+ +P  L+ L   +L QL  E+R  L   VS+T   L S L  VELTVALH+V+ 
Sbjct: 9   PLLSLINSPEDLRLLNKDQLPQLCQELRGYLLESVSQTSGHLASGLGTVELTVALHYVYK 68

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG Q Y HKILTGRR  + T+R+KDGI  +  R ESE+D  + GH   S+S
Sbjct: 69  TPFDQLIWDVGHQAYPHKILTGRRDQMSTIRQKDGIHPFPWREESEFDVLSVGHSSTSIS 128

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           AGLG+AVA + +      V VI +G   AG A+EA+++AG + ++M+VILND+  S+   
Sbjct: 129 AGLGIAVAAERENAGRKTVCVIGDGAITAGMAFEALNHAGSVHTDMLVILNDNEMSI--- 185

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                  ++ AL++ L+RI S   +  LR+ +K +  ++   +  +  K +E+ +G++  
Sbjct: 186 -----SENVGALNNHLARIFSGSIYSTLRDGSKKILDKV-PPVKNFMKKTEEHMKGVMFS 239

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             STLFEELG  YIGPVDGHNI++L++ L  + +L   GP  +H+ T++ +     +K  
Sbjct: 240 PESTLFEELGFNYIGPVDGHNIDELVATLTNMRNL--KGPQFLHIKTKKGKGYAPAEKDP 297

Query: 380 -AIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQ 438
                  +    S  LP  N   TY   F + L   AEKD  I+ +   M     +  F 
Sbjct: 298 IGFHGVPKFDPISGELPKHNSKPTYSKIFGDWLCEMAEKDSKIIGITPAMREGSGMVEFS 357

Query: 439 EKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRF 498
           ++FPE+YFDV +AEQHAVTF+ GLA GG KP   I S FLQRAYDQ+++DV  Q LPV F
Sbjct: 358 QRFPEQYFDVAIAEQHAVTFATGLAIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPVLF 417

Query: 499 VITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRY 558
            I  AG+VG+DGPT  GAFD++FM C+PNMI+M PSDE+E   M+ T      +P   RY
Sbjct: 418 AIDRAGIVGADGPTHQGAFDLSFMRCIPNMIIMTPSDENECRQMLYTGYQC-GKPAAVRY 476

Query: 559 PRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTV 618
           PRG  +  +L     +P  IGK +++ EG+ +A+L +G ++ + L+A   L     + TV
Sbjct: 477 PRGNAIGVELTPLEMLP--IGKSRLIREGQKIAILNFGTLLPSALEAAEKL-----NATV 529

Query: 619 ADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG----LLDSGVKW 673
            D RF KP+DI+++  L Q H +L+T+EE +I GG GS V+  +   G    LL  G   
Sbjct: 530 VDMRFVKPIDIEMINVLAQTHDYLVTLEENAIQGGAGSAVAEVLNSSGKSTALLQLG--- 586

Query: 674 RPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
               LPD +I  A+  + L   GL    I    L+ + +
Sbjct: 587 ----LPDYFIPQATQQEALKDLGLDSKGIEDKILNFIAK 621


>gi|88799590|ref|ZP_01115166.1| 1-deoxy-D-xylulose-5-phosphate synthase [Reinekea blandensis
           MED297]
 gi|88777675|gb|EAR08874.1| 1-deoxy-D-xylulose-5-phosphate synthase [Reinekea sp. MED297]
          Length = 626

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 259/627 (41%), Positives = 369/627 (58%), Gaps = 37/627 (5%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD VE P  L+ L + +L QLA E+R  L   V ++     + L  VELT+ALH+V+
Sbjct: 14  TPLLDTVETPADLRQLPMHQLPQLADELREYLLFSVGQSGGHFGAGLGVVELTIALHYVY 73

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P DK++WDVG Q Y HK+LTGRR  + T+R++ G+  +  R ESEYD F  GH   S+
Sbjct: 74  DTPEDKLVWDVGHQAYPHKVLTGRREQLPTIRQEGGLHAFPHRGESEYDTFGVGHSSTSI 133

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LGMA+A   KG     V VI +G   AG A+EA+++AG+  +NM+V+LND+  S+  
Sbjct: 134 SAALGMAIADRRKGNARQTVAVIGDGALTAGMAFEALNHAGHDGANMLVVLNDNDMSI-- 191

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                   ++ AL+   +R+ SSK++  LRE +K + K +   M E+A K +E+ +GM+ 
Sbjct: 192 ------SENVGALNKAFARVFSSKTYSHLRENSKKVLKNL-PPMLEFARKAEEHMKGMVA 244

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---RAEDT 375
           P   TLFEELG  Y+GPVDGH++ DL+  LQ + +    GP  +HV T++ +    AE+ 
Sbjct: 245 P--GTLFEELGFNYVGPVDGHDVIDLVQTLQNIRTFS--GPQFLHVATQKGKGFIPAENE 300

Query: 376 Q-KSEA---IEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMD 431
             K  A   IE Q E A  + + P       Y + F + L   A +D+ ++ V   M   
Sbjct: 301 PIKYHAITKIEPQSEQAGAAAAKP------KYSNVFGQWLCDMAARDERLLGVTPAMREG 354

Query: 432 LSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQ 491
             L  F   +PERY DV +AEQHAVT + G+AC G+KP   I S FLQRAYDQ+++D+  
Sbjct: 355 SDLVAFSSLYPERYHDVAIAEQHAVTVAGGMACEGMKPVVAIYSTFLQRAYDQLIHDIAL 414

Query: 492 QRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDD 551
           Q L V F I  AGLVG DGPT  G+FD T++ C+PNM+VMAP DE E   M+ T      
Sbjct: 415 QNLDVLFAIDRAGLVGEDGPTHAGSFDYTYLRCIPNMVVMAPKDEAECRAMLTTGYEYPG 474

Query: 552 RPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSK 611
            P   RYPRG     D+P      ++IG+ + L EG+ +A+L +G+MV+ C +    L  
Sbjct: 475 -PAAVRYPRGTGPGVDIPKTLEA-LQIGQSETLREGRRIAILAFGSMVEPCRQVAEAL-- 530

Query: 612 LGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSG 670
              D T+ + RF KPLD   V +L Q+H  L+TVEE +I GG GS V+  +  + L  + 
Sbjct: 531 ---DATLVNMRFIKPLDQDRVIQLAQSHELLVTVEENAIMGGAGSAVTETLNQNQLTCAC 587

Query: 671 VKWRPIVLPDNYIEHASPTQQLALAGL 697
           ++   + LPD YI+HA P + L+  GL
Sbjct: 588 LQ---LGLPDAYIDHAKPARMLSQVGL 611


>gi|114331489|ref|YP_747711.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrosomonas eutropha C91]
 gi|122313705|sp|Q0AFY6.1|DXS_NITEC RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|114308503|gb|ABI59746.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrosomonas eutropha C91]
          Length = 614

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 253/623 (40%), Positives = 369/623 (59%), Gaps = 31/623 (4%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+LD +E P +L++L   +L QLA E+RS L   V+KT   L S+L  +ELT+ALH++F 
Sbjct: 3   PLLDRIEIPAQLRNLKRSQLPQLADELRSFLIESVAKTGGHLSSNLGTIELTIALHYIFD 62

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG QTYAHKILTGRR+ +  LR + GI+G+  R ESEYD F   H   S+S
Sbjct: 63  TPFDRLVWDVGHQTYAHKILTGRRTGMAHLRMQGGIAGFPRRDESEYDAFGTAHSSTSIS 122

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           A LGMAVA  I   ++  + +I +G   AG A+EA++NAG +D++++VILND+  S+ P 
Sbjct: 123 AALGMAVAARINKIKQHAIAIIGDGAMSAGMAFEALNNAGVMDADLLVILNDNDMSISP- 181

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                   + AL+  L+++ S + +   R   + M   +   + E A + +E+ +GM+ P
Sbjct: 182 -------PVGALNHYLAKLMSGRFYATARRAGERMLGVVPPVL-ELAKRAEEHVKGMVTP 233

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR----RAEDT 375
              TLFEE G  YIGP+DGH+++ L++ L  +  L   GP  +H+VT + +      ED 
Sbjct: 234 --GTLFEEFGFNYIGPIDGHDLDILLTTLNNIKQLD--GPQFLHIVTRKGKGYKPAEEDP 289

Query: 376 QKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQ 435
                + K + G      +P  +    Y   F + L   A KD  ++ +   M     L 
Sbjct: 290 VLYHGVGKFEPG---KGVIPKPSTRPAYTQIFGDWLCDMAAKDSRLIGITPAMREGSGLI 346

Query: 436 LFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLP 495
            F +++P+RYFDVG+AEQHAVTF+AG AC GLKP   I S FLQRAYDQ+++DV  Q LP
Sbjct: 347 RFSKEYPDRYFDVGIAEQHAVTFAAGAACEGLKPVVAIYSTFLQRAYDQLIHDVAIQNLP 406

Query: 496 VRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVC 555
           V F I  AGLVG+DGPT  G+FD++++ C+PN+ VM P+DE+E   M+ T   +D  P  
Sbjct: 407 VVFAIDRAGLVGADGPTHAGSFDLSYLRCIPNITVMMPADENECRQMLYTAFQLDT-PTA 465

Query: 556 FRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGID 615
            RYPRG      +     I + +GKG++  +G  +ALL +G+M+  CL+A   L     D
Sbjct: 466 VRYPRGTGPGVQIKQEMQI-VPLGKGEIRRQGTRIALLAFGSMLSPCLEAGDEL-----D 519

Query: 616 VTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVKWR 674
            TV + RF KPLD +LV  L   H  L+TVEE +I GG GS V   +A  G+    ++  
Sbjct: 520 ATVVNMRFVKPLDQELVMTLAAEHELLVTVEENTIMGGAGSAVLECLASQGV---NIRLL 576

Query: 675 PIVLPDNYIEHASPTQQLALAGL 697
            + L DN+++   P Q L+  GL
Sbjct: 577 QLGLSDNFLDQGDPAQMLSDCGL 599


>gi|171363673|dbj|BAG14385.1| 1-deoxyxylulose-5-phosphate synthase [Perkinsus marinus]
          Length = 841

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 283/706 (40%), Positives = 388/706 (54%), Gaps = 84/706 (11%)

Query: 78  PTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHV 137
           PTP LD V++P  ++ +++ +LK L  + R  L   VS+T   L S+L  VELT ALHHV
Sbjct: 138 PTPTLDKVQSPEDIRKMSLPQLKDLCNDTRRFLVRSVSQTGGHLGSNLGVVELTAALHHV 197

Query: 138 FHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNS 197
           F  P DK++WDV  Q Y HKI TGRR  + TLR+  G+SG+T RSES YDPF AGH   +
Sbjct: 198 FDLPKDKLIWDVSHQAYPHKIFTGRRERMSTLRQGGGLSGFTKRSESPYDPFGAGHSGTA 257

Query: 198 VSAGLGMAVARDIKGK------RE--------------CIVTVISNGTTMAGQAYEAMSN 237
           +SA  G A+ARD K +      RE               +V+V+ +G    G AYEAM++
Sbjct: 258 MSAATGFAIARDHKKRVHDEAVREGGHTTPPLSPEDDYTVVSVVGDGAITGGMAYEAMNH 317

Query: 238 AGYLD-SNMIVILNDSRHSLHPKIEESPKTSINALSSTL--------------SRIQSSK 282
           AG+L     +VILND+     P       T + ALS  L              S++ SS 
Sbjct: 318 AGWLKLRKFLVILNDNGQVSLPTAYNEVHTPVGALSEALSKMGGMDSSVPDAISKVLSSP 377

Query: 283 SFRQLREVAKGMTKRI-GRGMHEWAAKVDEYARGMIGPQG-STLFEELGLYYIGPVDGHN 340
           SF+  R   K   K +    + E   +++EY RG++      T+FEELG YY+GPVDGH 
Sbjct: 378 SFQDARNTLKLAVKALCPPQLAESLGRIEEYGRGLLSTYSRGTMFEELGFYYVGPVDGHC 437

Query: 341 IEDLISVLQEVASLGSMG----PVLVHVVTEEN---RRAE--------------DTQKSE 379
           ++ L++VL  +      G    P+L+HV TE+    + AE               T K E
Sbjct: 438 LDTLVTVLSNLKQSMDEGKITKPILLHVKTEKGHGYKPAEVALDKLHGVTQFDVKTGKKE 497

Query: 380 AIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQE 439
              K  E    + +         Y D F +AL+  AE+D  IV + A M     L  F++
Sbjct: 498 VPTKVVEAPPTTETK--APKKMAYTDVFAKALIAAAERDSRIVAITAAMPGGTGLHHFEK 555

Query: 440 KFP-ERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRF 498
           KF  +R FDVG+ EQHAVT +AG+A  GL P+  I S+F+QRA DQ+V+DV  Q+LPVRF
Sbjct: 556 KFGLDRMFDVGICEQHAVTMAAGMAAEGLVPYAAIYSSFMQRAIDQMVHDVALQKLPVRF 615

Query: 499 VITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRY 558
           V+  AG VG+DGPT  G FD+  + C+P + + AP DE EL +M+ T++ +DD P   R+
Sbjct: 616 VLDRAGFVGADGPTHHGQFDLAMLGCIPGVKICAPGDEAELSNMIYTMSKLDDGPSVVRF 675

Query: 559 PRGAIVRTDLPGYRGIPI-------EIGKGKVLVE--GKD----VALLGYGAMVQNCLKA 605
           PRG+          G+PI       E GKG+V+ E  GK+    V LL  GA +  C KA
Sbjct: 676 PRGS--------GEGVPIPVVPEFLEPGKGRVVKEYDGKEGELSVVLLSLGARLGECKKA 727

Query: 606 RALLS-KLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALD 664
             +LS K G  VTVADAR+ KPLD  ++ EL + H  ++TVEEGSIGGFGSHV   +   
Sbjct: 728 AKVLSEKYGHHVTVADARWMKPLDETMICELARGHDIMVTVEEGSIGGFGSHVLELLTDK 787

Query: 665 GLLDSG-VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSL 709
           G+L  G +K   I +PD + +  +P  QL  AG++   I   A  L
Sbjct: 788 GILGDGKLKVGTIHIPDEWYQADTPENQLEKAGVSVDGIVGKARKL 833


>gi|221633258|ref|YP_002522483.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thermomicrobium roseum DSM
           5159]
 gi|254782085|sp|B9L1L6.1|DXS_THERP RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|221156054|gb|ACM05181.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thermomicrobium roseum DSM
           5159]
          Length = 629

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 265/643 (41%), Positives = 378/643 (58%), Gaps = 44/643 (6%)

Query: 82  LDLVENPLRLKSLTIKELKQLAVEIRSELSSIV-SKTEKSLKSSLAAVELTVALHHVFHA 140
           L+ +++P  LK L++ EL++LA EIR  +  +V  KT      +L  VELT+ALH+VF +
Sbjct: 3   LERIDSPQDLKRLSVPELEKLAEEIREAIIEVVLGKTGGHFAPNLGTVELTLALHYVFDS 62

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P DKI+WDVG Q Y HK++TGRR   HT+R++ G+SG+  R ES +D F AGH   S+SA
Sbjct: 63  PRDKIVWDVGHQAYPHKLVTGRRDRFHTIRQEGGLSGFLQREESPHDHFGAGHASTSISA 122

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKI 260
            LGMAVA  ++G R   + VI +G    G AYEA+++AG L   +IV+LND+  S+ P  
Sbjct: 123 ALGMAVAAKLRGDRYHTIAVIGDGALTGGMAYEALNHAGALQVPLIVVLNDNEMSIAP-- 180

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRG------MHEWAAKVDEYA- 313
                 ++ AL+  L+R+++   +RQ +   + + +R+ +G       H +   + E   
Sbjct: 181 ------NVGALARYLTRVRTDTRYRQAKVEIERLLRRLPQGERLVELSHRFLDGLKEVVY 234

Query: 314 RGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR--- 370
           R MI       +EELG  YIGP+DGHN+ +LI   Q V +  S  PV VHV+T + +   
Sbjct: 235 RTMI-------WEELGFTYIGPIDGHNLRELIETFQLVKTFDS--PVFVHVLTVKGKGYQ 285

Query: 371 -RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGME 429
              +D  K  +   +  GA  +           Y D F + LV  A K+  IV + A M 
Sbjct: 286 PAEDDPFKHHSAAVKVPGAPPTPP--------RYQDVFGQTLVELAAKNDRIVAITAAMP 337

Query: 430 MDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDV 489
               L  F   +P+R+FDVG+AEQHAVTF+AGLA  GL+P C I S FLQRAYDQV++DV
Sbjct: 338 DGTGLLPFAAAYPDRFFDVGIAEQHAVTFAAGLATQGLRPVCAIYSTFLQRAYDQVIHDV 397

Query: 490 DQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASI 549
             Q+LPV F +  AGLVG DG T  G FD+ ++ CLPNM++MAP DEDEL  M+AT  + 
Sbjct: 398 CIQKLPVVFAMDRAGLVGEDGRTHHGVFDVAYLRCLPNMVLMAPKDEDELRHMLATALAY 457

Query: 550 DDRPVCFRYPRGAIVRTDLPGY-RGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARAL 608
           ++ P+  RYPRG+ V   + G  R +P  IG+ ++L EG DVA++  GA V    +A  +
Sbjct: 458 EEGPIALRYPRGSGVGVPMLGEPRVLP--IGRAELLREGSDVAIVALGATVLPAERAADI 515

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLL 667
           L++ GI  TV +ARF KPLD  L+ +  +    L+TVEE  + GGFGS V   +A  GLL
Sbjct: 516 LAERGIRATVINARFVKPLDRSLILDAARECGCLVTVEEAQLAGGFGSAVLETLADAGLL 575

Query: 668 DSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
              ++   + L D + +HAS       AG+    IA+  L+ L
Sbjct: 576 IPVLR---LGLADRFFDHASQASLRRQAGIDAESIASRTLAFL 615


>gi|427402584|ref|ZP_18893581.1| 1-deoxy-D-xylulose-5-phosphate synthase [Massilia timonae CCUG
           45783]
 gi|425718390|gb|EKU81337.1| 1-deoxy-D-xylulose-5-phosphate synthase [Massilia timonae CCUG
           45783]
          Length = 624

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 271/635 (42%), Positives = 374/635 (58%), Gaps = 41/635 (6%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L+ + +P  L+ L   +L  LA E+R  L   VSKT   L S+L  VELT+ALH+V+  
Sbjct: 3   LLEKINDPSDLRKLPRTQLTPLAHELRQFLLESVSKTGGHLSSNLGTVELTIALHYVYDT 62

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+I+WDVG QTY+HKILTGRR  + TLR+ +G+SG+  R ESEYD F   H   S+SA
Sbjct: 63  PRDRIVWDVGHQTYSHKILTGRRGRMPTLRQLNGLSGFPKRDESEYDTFGTAHSSTSISA 122

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDS-NMIVILNDSRHSLHPK 259
            LGMA A  IKG+    + VI +G+  AG A+EA++NAG  D  N++VILND+  S+ P 
Sbjct: 123 ALGMATAARIKGEDRHAIAVIGDGSMTAGMAFEALNNAGVEDDVNLLVILNDNDMSISP- 181

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                   + AL+  L+R+ S + +   + V K +   +   + + A K++E+A+GM+ P
Sbjct: 182 -------PVGALNRYLARLLSGQFYAAAKNVGKSV---LPAPVLDLARKLEEHAKGMVVP 231

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             +T+FEE G  YIGP+DGH+++ LI  L+ +  L   GP  +HVVT   ++ +  + +E
Sbjct: 232 --ATMFEEFGFNYIGPIDGHDLDSLIPTLENIKKL--KGPQFLHVVT---KKGQGYKLAE 284

Query: 380 AIEKQQEGASDSNSLPFGNYSR-----TYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
           A      G    N L     S      TY + F   L   A  DK +V +   M     +
Sbjct: 285 AEPILYHGTGKFNHLEGIKPSTAPGKITYTEVFGNWLCDMAAADKRLVGITPAMREGSGM 344

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F +++P+RYFDVG+AEQH+VTF AG+A  GLKP   I S FLQRAYDQ+++DV  Q L
Sbjct: 345 VRFHQEYPQRYFDVGIAEQHSVTFGAGIATEGLKPVVAIYSTFLQRAYDQLIHDVALQNL 404

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
            V F +  AGLVG+DG T  G +D+ ++ C+PNM+VMA SDE+E   M+ T       P 
Sbjct: 405 DVTFALDRAGLVGADGATHAGNYDLAYLRCIPNMVVMAASDENECRQMLTTAYHYPG-PA 463

Query: 555 CFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGI 614
             RYPRGA V   +       IEIGKG+V   GK VALL +G+MV   LKA   L     
Sbjct: 464 AVRYPRGAGVGAQIAEALS-SIEIGKGEVRRTGKGVALLAFGSMVAPSLKAGDEL----- 517

Query: 615 DVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVKW 673
           D TVA+ RF KPLD++LV+ L Q H FL+TVEEG I GG G+ V   +A  G+       
Sbjct: 518 DATVANMRFVKPLDVELVKRLAQEHDFLVTVEEGCIMGGAGAAVMEALAAAGI------A 571

Query: 674 RPIV---LPDNYIEHASPTQQLALAGLTGHHIAAT 705
           +P++   LPDN+I+   P   LA  GL    IAA+
Sbjct: 572 KPVLNLGLPDNFIDQGDPQALLASVGLDAKGIAAS 606


>gi|417841999|ref|ZP_12488094.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus haemolyticus
           M19501]
 gi|341947779|gb|EGT74420.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus haemolyticus
           M19501]
          Length = 625

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 259/624 (41%), Positives = 371/624 (59%), Gaps = 34/624 (5%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+L L+ +P  L+ L   +L QL  E+R  L   VS+T   L S L  VELTVALH+V+ 
Sbjct: 9   PLLSLINSPEDLRLLNKDQLPQLCQELRGYLLESVSQTSGHLASGLGTVELTVALHYVYK 68

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG Q Y HKILTGRR  + T+R+KDGI  +  R ESE+D  + GH   S+S
Sbjct: 69  TPFDQLIWDVGHQAYPHKILTGRRDQMSTIRQKDGIHPFPWREESEFDVLSVGHSSTSIS 128

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           AGLG+AVA + +      V VI +G   AG A+EA+++AG + ++M+VILND+  S+   
Sbjct: 129 AGLGIAVAAERENAGRKTVCVIGDGAITAGMAFEALNHAGSVHTDMLVILNDNEMSI--- 185

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                  ++ AL++ L+RI S   +  LR+ +K +  ++   +  +  K +E+ +G++  
Sbjct: 186 -----SENVGALNNHLARIFSGSIYSTLRDGSKKILDKV-PPVKNFMKKTEEHMKGVMFS 239

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             STLFEELG  YIGPVDGHNI++L++ L  + +L   GP  +H+ T++ +     +K  
Sbjct: 240 PESTLFEELGFNYIGPVDGHNIDELVATLTNMRNL--KGPQFLHIKTKKGKGYAPAEKDP 297

Query: 380 -AIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQ 438
                  +    S  LP  N   TY   F + L   AEKD  I+ +   M     +  F 
Sbjct: 298 IGFHGVPKFDPISGELPKHNTKPTYSKIFGDWLCEMAEKDSKIIGITPAMREGSGMVEFS 357

Query: 439 EKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRF 498
           ++FPE+YFDV +AEQHAVTF+ GLA GG KP   I S FLQRAYDQ+++DV  Q LPV F
Sbjct: 358 QRFPEQYFDVAIAEQHAVTFATGLAIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPVLF 417

Query: 499 VITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRY 558
            I  AG+VG+DGPT  GAFD++FM C+PNMI+M PSDE+E   M+ T      +P   RY
Sbjct: 418 AIDRAGIVGADGPTHQGAFDLSFMRCIPNMIIMTPSDENECRQMLYTGYQC-GKPAAVRY 476

Query: 559 PRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTV 618
           PRG  +  +L     +P  IGK +++ EG+ +A+L +G ++ + L+    L     + TV
Sbjct: 477 PRGNAIGVELTPLEMLP--IGKSRLIREGQKIAILNFGTLLPSALEPAEKL-----NATV 529

Query: 619 ADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG----LLDSGVKW 673
            D RF KP+DI+++  L Q+H +L+T+EE +I GG GS V+  +   G    LL  G   
Sbjct: 530 VDMRFVKPIDIEMIDVLAQSHDYLVTLEENAIQGGAGSAVAEVLNSSGKSTALLQLG--- 586

Query: 674 RPIVLPDNYIEHASPTQQLALAGL 697
               LPD +I  A  TQQ ALA L
Sbjct: 587 ----LPDYFIPQA--TQQEALADL 604


>gi|147669319|ref|YP_001214137.1| 1-deoxy-D-xylulose-5-phosphate synthase [Dehalococcoides sp. BAV1]
 gi|226740148|sp|A5FRB9.1|DXS_DEHSB RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|146270267|gb|ABQ17259.1| 1-deoxy-D-xylulose-5-phosphate synthase [Dehalococcoides sp. BAV1]
          Length = 633

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 258/646 (39%), Positives = 378/646 (58%), Gaps = 32/646 (4%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           + +LD + +P  LK L++ EL++LAV+IR EL + V+     L SSL  VELT+ALH VF
Sbjct: 2   SKLLDTINSPSDLKKLSLDELRELAVQIREELVNRVTLNGGHLASSLGVVELTIALHRVF 61

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
            +P DKI+WDVG Q+YAHK+LTGRR    TLR+  G+SG+T R ES +DPF AGH   S+
Sbjct: 62  ESPKDKIIWDVGHQSYAHKLLTGRREQFATLRQHGGLSGFTCRDESPHDPFGAGHASTSI 121

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVARD+  +   +++VI +G    G ++EA++NAG+L +  IVILND+  ++ P
Sbjct: 122 SAGLGMAVARDLAKEDYSVISVIGDGAISGGMSFEAINNAGHLHTKFIVILNDNGMAISP 181

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVD---EYARG 315
                   S  ALS  L+ ++    F   +  AK     +  G   WA       ++ + 
Sbjct: 182 --------STGALSKFLNNVRFDPRFEFAKRNAKQTITNMPFGKAVWAFTKSIKRKFEKS 233

Query: 316 MIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDT 375
           M+     +L+EELG  Y+GPVDGHNI +L + L+      S  PVL+H++T++ +  +D 
Sbjct: 234 ML---PGSLWEELGFIYLGPVDGHNIRELEAALKRAKDFESK-PVLIHMITKKGKGYDDA 289

Query: 376 Q----KSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMD 431
           +    K   I  +  G   S+ L       +Y   F + L     ++  +V + A M   
Sbjct: 290 EADAVKYHGISPKSGGLKSSHGL-------SYSQVFGQTLHKIMSQNPQVVAITAAMTDG 342

Query: 432 LSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQ 491
             L      FP+R FDVG+ EQHAVTF+AG+A  G  P  +I S FLQR +DQ+++DV  
Sbjct: 343 CGLGEIAAAFPDRVFDVGICEQHAVTFAAGMATQGYIPVVVIYSTFLQRGFDQIIHDVCL 402

Query: 492 QRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDD 551
           Q+LPV F I   G+VG DG T  G FD++FMS +P+M+V APSDE++L  ++ T  +   
Sbjct: 403 QKLPVVFAIDRGGIVGDDGKTHQGIFDLSFMSLIPDMVVSAPSDENDLQHLLYTAVN-SG 461

Query: 552 RPVCFRYPRGAIVRTDL-PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLS 610
           +P   RYPRG     ++      IP  IG+ ++LV G DVA+L  G  V    +A  +L+
Sbjct: 462 KPFALRYPRGFGEGVEIESSLHNIP--IGQNEILVNGSDVAILATGKSVAFAREALEILT 519

Query: 611 KLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDS 669
           + GI  T+ + R+  PLD +LV ++ Q+H +L+TVEE  I GG GS ++  +A  GL++ 
Sbjct: 520 ESGIKPTLVNNRYISPLDSELVLKIAQSHKYLVTVEENVISGGLGSRINTLLAEAGLVNK 579

Query: 670 GVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTRE 715
            +K   I +PD ++EH + +   A  GL G  IA   LSL+G   E
Sbjct: 580 -IKIANIGIPDKFVEHGNQSLLRAKYGLDGKGIAQRVLSLVGNPNE 624


>gi|75910729|ref|YP_325025.1| 1-deoxy-D-xylulose-5-phosphate synthase [Anabaena variabilis ATCC
           29413]
 gi|118595492|sp|Q3M4F6.1|DXS_ANAVT RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|75704454|gb|ABA24130.1| 1-deoxy-D-xylulose-5-phosphate synthase [Anabaena variabilis ATCC
           29413]
          Length = 635

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 256/638 (40%), Positives = 376/638 (58%), Gaps = 27/638 (4%)

Query: 82  LDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAP 141
           L  + +P +L  L+I++L+Q+A +IR +    V++    L   L  VELT+ L+      
Sbjct: 3   LSEITHPNQLHGLSIRQLQQIARQIRDKHLQTVAEFGGHLGPGLGVVELTLGLYQTLDLD 62

Query: 142 VDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAG 201
            DK++WDVG Q Y HK++TGR S  HTLR+KDGI+GY  R E+++D F AGH   S+SA 
Sbjct: 63  RDKVIWDVGHQAYPHKLITGRYSDFHTLRQKDGIAGYLKRGENKFDHFGAGHASTSISAA 122

Query: 202 LGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPKI 260
           LGMA+ARD+ G++   V VI +G    G A EA+++AG+L  +N++V+LND+  S+ P +
Sbjct: 123 LGMALARDMNGEKFKAVAVIGDGALTGGMALEAINHAGHLPKTNLLVVLNDNEMSISPNV 182

Query: 261 EESPK-TSINALSSTLSRIQSS--KSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMI 317
              P+  +   LS  +  I+ +  + F+ +  V + ++  +GR        + E  + + 
Sbjct: 183 GAIPRYLNKMRLSPPVQFIKDNFEEQFKHIPFVGESLSPELGR--------IKEGMKRLA 234

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQK 377
            P+   +FEELG  Y+GPVDGHN+E+LI+  Q+   +   GPVLVHV T + +  E  +K
Sbjct: 235 VPKVGAVFEELGFTYMGPVDGHNLEELIATFQQAHQIA--GPVLVHVATIKGKGYELAEK 292

Query: 378 SEAIEKQQE--GASDSNSLPFGNYSR--TYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
            +     Q     +   ++P  N  +   Y   F   LV  AE++  I+ + A M     
Sbjct: 293 DQVGYHAQTPFNLTTGKAIP-SNKPKPPAYAKVFSHTLVKLAEQNPKIIGITAAMATGTG 351

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L   Q K P +Y DVG+AEQHAVT +AGLAC G++P   I S FLQRAYDQ+++DV  Q 
Sbjct: 352 LDKLQAKLPNQYIDVGIAEQHAVTLAAGLACEGMRPVAAIYSTFLQRAYDQIIHDVCIQN 411

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPV F +  AG+VGSDGPT  G +DI ++ C+PN+++MAP DE E+  MV T       P
Sbjct: 412 LPVFFCLDRAGIVGSDGPTHQGMYDIAYLRCIPNIVMMAPKDEAEMQRMVVTGIEYTTGP 471

Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
           +  R+PRG      L      P+EIGKG++L  G DV ++GYG MV   ++A  +LS+ G
Sbjct: 472 IAMRFPRGNGYGVPLMEEGWEPLEIGKGEILRNGDDVLIIGYGTMVYPSMQAAEILSEHG 531

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSG-- 670
           I+ TV +ARF KPLD +L+  L Q    ++T+EEG + GGFGS V+     + LLD+   
Sbjct: 532 IEATVINARFVKPLDTELIVPLAQKIGRVVTLEEGCVMGGFGSAVA-----EALLDADVV 586

Query: 671 VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALS 708
           V  + I +PD  +EHA+P +  A  GLT   IA   L 
Sbjct: 587 VPVKRIGIPDVLVEHATPDESKAELGLTSRQIAERVLQ 624


>gi|388567038|ref|ZP_10153477.1| 1-deoxy-d-xylulose-5-phosphate synthase [Hydrogenophaga sp. PBC]
 gi|388265743|gb|EIK91294.1| 1-deoxy-d-xylulose-5-phosphate synthase [Hydrogenophaga sp. PBC]
          Length = 635

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 261/632 (41%), Positives = 379/632 (59%), Gaps = 42/632 (6%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           T +LD V +P+ L+ L   +LK LA E+R  L + V++T   L S+L  VELT+ALH+VF
Sbjct: 6   TTLLDNVHSPVDLRRLARPQLKPLADELRQFLLNSVARTGGHLSSNLGTVELTIALHYVF 65

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+++WDVG QTY HKILTGRR  + TLR+  GISG+  R ES YD F   H   S+
Sbjct: 66  NTPEDRLVWDVGHQTYPHKILTGRRDRMDTLRQLGGISGFPRRDESPYDTFGTAHSSTSI 125

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LGMA+A   KG+    V +I +G   AG A+EA++NAG  D  ++VILND+  S+ P
Sbjct: 126 SAALGMAMAAKAKGEDRRAVAIIGDGAMTAGMAFEALNNAGVADGKLLVILNDNDMSISP 185

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRG---MHEWAAKVDEYARG 315
                    + AL+  L+++ S     Q    AK M K++ +G   + E A + ++ A+G
Sbjct: 186 --------PVGALNRYLAQLMSG----QFYAAAKHMGKQVLKGAPPLFELAKRFEQQAKG 233

Query: 316 MIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASL--GSMGPVLVHVVTEENRRAE 373
           M+ P  +TLFE+ G  YIGP+DGH+++ LI  L+ +  L     GP  +HVVT++  +  
Sbjct: 234 MVVP--ATLFEKFGFNYIGPIDGHDLDSLIPTLENIRQLMDAHEGPQFLHVVTKKG-QGY 290

Query: 374 DTQKSEAIEKQQEGASDSN---SLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
              +++ +     G  D     + P      T+   F + L   A  D+ +V +   M  
Sbjct: 291 KLAEADPVAYHGPGKFDPAVGLTKPATPPKTTFTQVFGQWLCDMAAADQRLVGITPAMRE 350

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              +  F+ +FP+RYFDVG+AEQHAVTF+AGLAC GLKP   I S FLQRAYDQ+++DV 
Sbjct: 351 GSGMVEFERRFPDRYFDVGIAEQHAVTFAAGLACEGLKPVVAIYSTFLQRAYDQLIHDVA 410

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q LPV F +  AGLVG+DG T  GA+D+ ++ C+P + V  P+DE E   +++T A   
Sbjct: 411 LQNLPVVFALDRAGLVGADGATHAGAYDVAYLRCIPQVSVACPADEGECRQLLST-AFAQ 469

Query: 551 DRPVCFRYPRGAIVRTDLP-GYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALL 609
           + PV  RYPRGA V    P G +G+P   GKG++  +G+ VA+L +G ++   L A    
Sbjct: 470 NHPVAVRYPRGAGVGAAQPEGLQGLP--FGKGELRRKGRGVAILAFGTLLYPALAAA--- 524

Query: 610 SKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEG-SIGGFGSHVSHFIALDGLLD 668
            +LG   +VA+ R+ KPLDI+L+RE+ + H  ++TVEEG ++GG GS V   +  +GL  
Sbjct: 525 ERLG--ASVANMRWVKPLDIELLREIARTHVAIVTVEEGCTMGGAGSAVMEALQAEGL-- 580

Query: 669 SGVKWRPIV---LPDNYIEHASPTQQLALAGL 697
                 P++   LPD++IEH  P + LAL GL
Sbjct: 581 ----QLPVLALGLPDDFIEHGDPAKLLALQGL 608


>gi|357038610|ref|ZP_09100407.1| 1-deoxy-D-xylulose-5-phosphate synthase [Desulfotomaculum gibsoniae
           DSM 7213]
 gi|355359402|gb|EHG07164.1| 1-deoxy-D-xylulose-5-phosphate synthase [Desulfotomaculum gibsoniae
           DSM 7213]
          Length = 639

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 259/647 (40%), Positives = 390/647 (60%), Gaps = 36/647 (5%)

Query: 82  LDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAP 141
           LD + +P  +++LTI +L+QLA EIR E+ + V+K    L  +L  VELT+ALH VF+ P
Sbjct: 5   LDQINSPWDVRALTIPQLEQLAGEIREEIITTVAKNGGHLAPNLGVVELTLALHRVFYTP 64

Query: 142 VDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAG 201
            DKI+WDVG Q Y HK++TGRR   +TLR   G+SG+    ESE+D F  GH   S+SA 
Sbjct: 65  RDKIIWDVGHQCYVHKLITGRREQFYTLRCHGGLSGFPRPDESEHDAFATGHSSTSISAA 124

Query: 202 LGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKIE 261
           LGMA+ARD+KG R  +V VI +G+   G AYEA+++AG+L  ++IV+LND++ S+     
Sbjct: 125 LGMALARDLKGDRYAVVAVIGDGSMTGGMAYEALNHAGHLKKDLIVVLNDNKMSI----- 179

Query: 262 ESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKR---IGRGMHEWAAKVDEYARGMIG 318
                ++ A+S  L+R+++   + + ++  + + +R   IG  + + A ++ +  + ++ 
Sbjct: 180 ---SANVGAMSGYLNRMRTDPKYSRGKDEIEQILRRIPSIGSTVVKVAERLKDSFKYLVV 236

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
           P    +FEE+G  Y+GP+DGHN+  +++  ++  SLG  GPVLVHVVTE+         +
Sbjct: 237 P--GMIFEEMGFTYLGPIDGHNMLSMLNTFEQAKSLG--GPVLVHVVTEKG-----CGYA 287

Query: 379 EAIEKQQE-------GASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMD 431
            A+EK  +         S  N L   + S TY + F   LV  AE+D  +V + A M   
Sbjct: 288 PAVEKADKFHGIGPFDISSGNCLKKSDIS-TYTEIFGRTLVKLAEQDPAVVGITAAMCSG 346

Query: 432 LSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQ 491
             L  F +KFP R+FDVG+AEQHAVT +AGLA  G KP   + S FLQRAYDQ+++DV  
Sbjct: 347 TGLNEFAKKFPSRFFDVGIAEQHAVTMAAGLATQGYKPVVAVYSTFLQRAYDQIIHDVCL 406

Query: 492 QRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDD 551
           Q+LPV F +  +G+VG DGPT  G FDI+++   P+M +MAP+DE+EL  M+ T   ++ 
Sbjct: 407 QKLPVVFAVDRSGIVGDDGPTHHGLFDISYLRSAPHMTIMAPADENELQHMLHTALQVNG 466

Query: 552 RPVCFRYPRGAIVRTDLPGY-RGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLS 610
            P   RYPRG  +   L  + R +P  +G+ +VLVEGKD+ LL  G MV    +A  +L 
Sbjct: 467 -PCAVRYPRGTGLGVALDLHSRALP--VGQAEVLVEGKDITLLAVGNMVPVARRAAVMLK 523

Query: 611 KLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDS 669
           + G+  TV +ARF KPLD + +         LIT+EE ++ GGFGS V   +A   +   
Sbjct: 524 ERGVLATVINARFIKPLDDECITRWAARTGRLITIEENTLAGGFGSAVLQLLAAKEM--P 581

Query: 670 GVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREA 716
           G++ + + + D +IEH   +      GLT  +I   A+ ++G +R+A
Sbjct: 582 GIQVKCVGIEDVFIEHGGQSLLRKNYGLTPENIMNLAMQMIG-SRKA 627


>gi|308274742|emb|CBX31341.1| 1-deoxy-D-xylulose-5-phosphate synthase 1 [uncultured
           Desulfobacterium sp.]
          Length = 636

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 272/651 (41%), Positives = 373/651 (57%), Gaps = 45/651 (6%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           ILD + +P  LK +   +L  LA EIRS +  +VSK    L SSL AVEL +A+H+VF  
Sbjct: 11  ILDTINSPDDLKKIPRSDLPDLAAEIRSLIVEVVSKNGGHLASSLGAVELAIAIHYVFDV 70

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P DKI+WDVG Q+YAHKI+TGRR   HTLRK +GI G+T   ES+YD F  GH   S+SA
Sbjct: 71  PHDKIIWDVGHQSYAHKIITGRREKFHTLRKYEGICGFTRMCESQYDSFTTGHSSTSISA 130

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSN--MIVILNDSRHSLHP 258
           GLG+A A+ +K +   ++ VI +G+  AG AYE M+  GYL  N   IVILND+  S+  
Sbjct: 131 GLGIACAKSLKKENNKVIAVIGDGSMTAGLAYEGMNQTGYLHKNKDFIVILNDNDMSI-- 188

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLR----EVAKGMTKRIGRGMHEWAAKVDEYAR 314
                   ++ ALSS LSR  S K  + LR    E  K + K IG  ++++A + +E+ +
Sbjct: 189 ------SKNVGALSSFLSRTFSKKYLQDLRKEFGEFLKSLPK-IGDDLYKFAKRSEEFFK 241

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAED 374
               P    LFE     Y GP++GHNI  LI +L  +  L    PVL+H+ T + +    
Sbjct: 242 TFATP--GMLFEAFNFDYFGPINGHNINHLIDILNNIKHLRE--PVLLHITTTKGKGYPP 297

Query: 375 TQKS----EAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
            +++      I   +    + N+    N   TY + F + +V  A K++ I+ V A M  
Sbjct: 298 AERNPIYFHGIGSFKVKTGNCNNTK--NGISTYTEVFGKTMVELAGKNEKIIAVTAAMPE 355

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L  F E FPER+FDVG+AEQH VTFSAGLA  G +P   I S FLQRAYDQ+++DV 
Sbjct: 356 GTGLTEFSEIFPERFFDVGIAEQHGVTFSAGLATEGFRPVVAIYSTFLQRAYDQILHDVC 415

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            + LPV F +  AG+VG DG T  G FDI+++  LPNM+VMAP DE+EL  M+ T  S  
Sbjct: 416 LESLPVIFAVDRAGIVGEDGATHNGLFDISYLRNLPNMVVMAPKDENELRQMLLTALS-H 474

Query: 551 DRPVCFRYPRGAIVRTDLPGYRGIPIE-------IGKGKVLVEGKDVALLGYGAMVQNCL 603
           + P+ FRYPRG  V        G+PIE       IGKG++L +G D+ +L  G  V   L
Sbjct: 475 NGPIAFRYPRGTGV--------GVPIEPDIKPLPIGKGEILKKGTDILILAIGHSVCESL 526

Query: 604 KA-RALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEG-SIGGFGSHVSHFI 661
            A   L+S+ GI  TV + RF KPLD +L+  L +    LITVEE   +GGFGS V   +
Sbjct: 527 NAYEKLISEHGISSTVVNCRFVKPLDTELIISLTKEIPRLITVEENIRMGGFGSAVLECL 586

Query: 662 ALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
           +  G+ D   K   + +PD +++H       A   +  + I  +AL L+GR
Sbjct: 587 SDGGIYD--YKIDRLGIPDVFVDHGPQNLLRAKYKIDSNAIVNSALKLMGR 635


>gi|342904303|ref|ZP_08726104.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus haemolyticus
           M21621]
 gi|341953543|gb|EGT80047.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus haemolyticus
           M21621]
          Length = 643

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 257/639 (40%), Positives = 374/639 (58%), Gaps = 32/639 (5%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+L L+ +P  L+ L  ++L QL  E+R  L   VS+T   L S L  VELTVALH+V+ 
Sbjct: 27  PLLSLINSPEDLRLLNKEQLPQLCQELRGYLLESVSQTSGHLASGLGTVELTVALHYVYK 86

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG Q Y HKILTGRR  + T+R+KDGI  +  R ESE+D  + GH   S+S
Sbjct: 87  TPFDQLIWDVGHQAYPHKILTGRRDQMSTIRQKDGIHPFPWREESEFDVLSVGHSSTSIS 146

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           AGLG+AV  + +      V VI +G   AG A+EA+++AG + ++M+VILND+  S+   
Sbjct: 147 AGLGIAVTAERENAGRKTVCVIGDGAITAGMAFEALNHAGSVHTDMLVILNDNEMSI--- 203

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                  ++ AL++ L+RI S   +  LR+ +K +  ++   +  +  K +E+ +G++  
Sbjct: 204 -----SENVGALNNHLARIFSGSIYSTLRDGSKKILDKV-PPVKNFMKKTEEHMKGVMFS 257

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             STLFEELG  YIGPVDGHNI++L++ L  + +L   GP  +H+ T++ +     +K  
Sbjct: 258 PESTLFEELGFNYIGPVDGHNIDELVATLTNMRNL--KGPQFLHIKTKKGKGYAPAEKDP 315

Query: 380 -AIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQ 438
                  +    S  LP  N   TY   F + L   AEKD  I+ +   M     +  F 
Sbjct: 316 IGFHGVPKFDPISGELPKHNTKPTYSKIFGDWLCEMAEKDSKIIGITPAMREGSGMVEFS 375

Query: 439 EKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRF 498
           ++FPE+YFDV +AEQHAVTF+ GLA GG KP   I S FLQRAYDQ+++DV  Q LPV F
Sbjct: 376 QRFPEQYFDVAIAEQHAVTFATGLAIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPVLF 435

Query: 499 VITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRY 558
            I  AG+VG+DGPT  GAFD++FM C+PNMI+M PSDE+E   M+ T      +P   RY
Sbjct: 436 AIDRAGIVGADGPTHQGAFDLSFMRCIPNMIIMTPSDENECRQMLYTGYQC-GKPAAVRY 494

Query: 559 PRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTV 618
           PRG  +  +L     +P  IGK +++ EG+ +A+L +G ++ + L+A   L     + TV
Sbjct: 495 PRGNAIGVELTPLEMLP--IGKSRLIREGQKIAILNFGTLLPSALEAAEKL-----NATV 547

Query: 619 ADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG----LLDSGVKW 673
            D RF KP+DI+++  L Q H +L+T+EE +I GG GS V+  +   G    LL  G   
Sbjct: 548 VDMRFVKPIDIEMINVLAQTHDYLVTLEENAIQGGAGSAVAEVLNSSGKSTALLQLG--- 604

Query: 674 RPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
               LPD +I  A+  + L   GL    I    L+ + +
Sbjct: 605 ----LPDYFIPQATQQEALKDLGLDSKGIEEKILNFIAK 639


>gi|386288982|ref|ZP_10066121.1| 1-deoxy-D-xylulose-5-phosphate synthase [gamma proteobacterium
           BDW918]
 gi|385277986|gb|EIF41959.1| 1-deoxy-D-xylulose-5-phosphate synthase [gamma proteobacterium
           BDW918]
          Length = 641

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 250/627 (39%), Positives = 369/627 (58%), Gaps = 33/627 (5%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD +++P  L+ L   EL  LA+++R  L   V +T     + L  VELTVALH+++
Sbjct: 12  TPLLDRIDSPADLRRLDEAELATLALQLREFLLYTVGQTGGHFGAGLGVVELTVALHYIY 71

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+++WDVG Q Y HKILTGRR  ++ +RK  G++G+  R ES YD F  GH   S+
Sbjct: 72  NTPDDRLVWDVGHQCYPHKILTGRRERMNGMRKAKGLAGFPKREESPYDTFGVGHSSTSI 131

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LGMA+A   +      V VI +G   AG A+EA+++A +  +NM+VILND++ S+  
Sbjct: 132 SAALGMAIAARQQNIDRHTVAVIGDGAMTAGMAFEAITHATHTGANMLVILNDNQMSI-- 189

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                   S   L++  SR+ +SK++ Q+R   K + K+  R   + AA+++EY +GM+ 
Sbjct: 190 ------SKSTGGLNTYFSRMWASKTYNQIRSGGKTVLKKFPRSATDLAARLEEYMKGMVS 243

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR----RAED 374
           P  +TLFEELG  YIGP+DGH+++ L+  L+ +  L   GP ++H+ T++ +      ED
Sbjct: 244 P--ATLFEELGFNYIGPIDGHDLDVLVPTLRNLREL--PGPQMLHIRTQKGKGFGPAEED 299

Query: 375 TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
                AI K +   S+  +         Y D F   L  +AE+  ++V +   M     +
Sbjct: 300 PVGFHAISKIEPKPSNGQAPIVKPTLAKYQDIFGRWLCDQAEQSPELVAITPAMCEGSGM 359

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F E+F +R++DV +AEQHA+T +AG+AC GLKP   I S FLQRAYDQ+++D+  Q L
Sbjct: 360 LDFSERFADRFYDVAIAEQHALTLAAGMACDGLKPVVAIYSTFLQRAYDQLIHDIALQNL 419

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
            V F I  AGLVG DGPT  GAFD++F+ C+PNMIVMAP+DE+E   M+ T       P 
Sbjct: 420 DVTFGIDRAGLVGEDGPTHAGAFDLSFLRCIPNMIVMAPADENETRQMLHTAYHYPG-PA 478

Query: 555 CFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGI 614
             RYPRG      +     + +EIGKG++  +G+ +A+L +G ++ + L A   L     
Sbjct: 479 AVRYPRGTGPGVSIEQDMQL-MEIGKGRIQRQGQKIAILSFGTLLASALNAADEL----- 532

Query: 615 DVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVKW 673
           D TVAD RF KPLD  L+  L  +H  L+T+EE  I GG GS VS +      L+   +W
Sbjct: 533 DATVADMRFVKPLDTDLIDALADDHDLLVTLEENVIAGGAGSAVSEY------LNQQNRW 586

Query: 674 RPIV---LPDNYIEHASPTQQLALAGL 697
            P++   LPD +I+H    Q L+  GL
Sbjct: 587 MPVMQLGLPDAFIDHGKHAQLLSDIGL 613


>gi|386265886|ref|YP_005829378.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           R2846]
 gi|309973122|gb|ADO96323.1| 1-deoxyxylulose-5-phosphate synthase [Haemophilus influenzae R2846]
          Length = 625

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 260/624 (41%), Positives = 369/624 (59%), Gaps = 34/624 (5%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+L L+ +P  L+ L   +L QL  E+R+ L   VS+T   L S L  VELTVALH+V+ 
Sbjct: 9   PLLSLINSPEDLRLLNKDQLPQLCQELRAYLLESVSQTSGHLASGLGTVELTVALHYVYK 68

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG Q Y HKILTGRR  + T+R+K GI  +  R ESE+D  + GH   S+S
Sbjct: 69  TPFDQLIWDVGHQAYPHKILTGRREQMSTIRQKGGIHPFPWREESEFDVLSVGHSSTSIS 128

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           AGLG+AVA + +      V VI +G+  AG A+EA+++AG L ++M+VILND+  S+   
Sbjct: 129 AGLGIAVAAERENASRKTVCVIGDGSITAGMAFEALNHAGALHTDMLVILNDNEMSI--- 185

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                  ++ AL++ L+RI S   +  LR+ +K +  ++   +  +  K +E+ +G++  
Sbjct: 186 -----SENVGALNNHLARIFSGSLYSTLRDGSKKILDKV-PPIKNFMKKTEEHMKGVMFS 239

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             STLFEELG  YIGPVDGHNIE+L++ L  + +L   GP  +H+ T++ +     +K  
Sbjct: 240 PESTLFEELGFNYIGPVDGHNIEELVATLTNMRNL--KGPQFLHIKTKKGKGYAPAEKDP 297

Query: 380 -AIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQ 438
                  +    S  LP  N   TY   F + L   AEKD  I+ +   M     +  F 
Sbjct: 298 IGFHGVPKFDPISGELPKNNSKPTYSKIFGDWLCEMAEKDAKIIGITPAMREGSGMVEFS 357

Query: 439 EKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRF 498
           ++FP++YFDV +AEQHAVTF+ GLA GG KP   I S FLQRAYDQ+++DV  Q LPV F
Sbjct: 358 QRFPKQYFDVAIAEQHAVTFATGLAIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPVLF 417

Query: 499 VITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRY 558
            I  AG+VG+DG T  GAFD++FM C+PNMI+M PSDE+E   M+ T      +P   RY
Sbjct: 418 AIDRAGIVGADGATHQGAFDLSFMRCIPNMIIMTPSDENECRQMLYTGYQC-GKPAAVRY 476

Query: 559 PRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTV 618
           PRG  V   L     +P  IGK +++ EG+ +A+L +G ++ + L+A   L     + TV
Sbjct: 477 PRGNAVGVKLTPLEMLP--IGKSRLIREGQKIAILNFGTLLPSALEASEKL-----NATV 529

Query: 619 ADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG----LLDSGVKW 673
            D RF KP+DI+++  L Q H +L+T+EE +I GG GS VS  +   G    LL  G   
Sbjct: 530 VDMRFVKPIDIEMINMLAQTHDYLVTLEENAIQGGVGSAVSEVLNSSGKSTALLQLG--- 586

Query: 674 RPIVLPDNYIEHASPTQQLALAGL 697
               LPD +I  A  TQQ AL  L
Sbjct: 587 ----LPDYFIPQA--TQQEALEDL 604


>gi|378697712|ref|YP_005179670.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           10810]
 gi|301170228|emb|CBW29832.1| 1-deoxyxylulose-5-phosphate synthase, thiamine-requiring,
           FAD-requiring [Haemophilus influenzae 10810]
          Length = 620

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 262/640 (40%), Positives = 376/640 (58%), Gaps = 32/640 (5%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+L L+ +P  L+ L   +L QL  E+R+ L   VS+T   L S L  VELTVALH+V+ 
Sbjct: 5   PLLSLINSPEDLRLLNKDQLPQLCQELRAYLLESVSQTSGHLASGLGTVELTVALHYVYK 64

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG Q Y HKILTGRR  + T+R+KDGI  +  R ESE+D  + GH   S+S
Sbjct: 65  TPFDQLIWDVGHQAYPHKILTGRREQMSTIRQKDGIHPFPWREESEFDVLSVGHSSTSIS 124

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           AGLG+AVA + +      V VI +G   AG A+EA+++AG L ++M+VILND+  S+   
Sbjct: 125 AGLGIAVAAERENAGRKTVCVIGDGAITAGMAFEALNHAGALHTDMLVILNDNEMSI--- 181

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                  ++ AL++ L+RI S   +  LR+ +K +  ++   +  +  K +E+ +G++  
Sbjct: 182 -----SENVGALNNHLARIFSGSLYSTLRDGSKKILDKV-PPIKNFMKKTEEHMKGVMFS 235

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             STLFEELG  YIGPVDGHNI++L++ L  + +L   GP  +H+ T++ +     +K  
Sbjct: 236 PESTLFEELGFNYIGPVDGHNIDELVATLTNMRNL--KGPQFLHIKTKKGKGYAPAEKDP 293

Query: 380 -AIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQ 438
                  +    S  LP  N   TY   F + L   AEKD  I+ +   M     +  F 
Sbjct: 294 IGFHGVPKFDPISGELPKNNSKPTYSKIFGDWLCEMAEKDAKIIGITPAMREGSGMVEFS 353

Query: 439 EKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRF 498
           ++FP++YFDV +AEQHAVTF+ GLA GG KP   I S FLQRAYDQ+++DV  Q LPV F
Sbjct: 354 QRFPKQYFDVAIAEQHAVTFATGLAIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPVLF 413

Query: 499 VITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRY 558
            I  AG+VG+DG T  GAFDI+FM C+PNMI+M PSDE+E   M+ T      +P   RY
Sbjct: 414 AIDRAGIVGADGATHQGAFDISFMRCIPNMIIMTPSDENECRQMLYTGYQC-GKPAAVRY 472

Query: 559 PRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTV 618
           PRG  V   L     +P  IGK +++ +G+ +A+L +G ++ + L+   L  KL  + TV
Sbjct: 473 PRGNAVGVKLTPLEMLP--IGKSRLIRKGQKIAILNFGTLLPSALE---LSEKL--NATV 525

Query: 619 ADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG----LLDSGVKW 673
            D RF KP+DI+++  L Q H +L+T+EE +I GG GS V+  +   G    LL  G   
Sbjct: 526 VDMRFVKPIDIEMINMLAQTHDYLVTLEENAIQGGAGSAVAEVLNSSGKSTALLQLG--- 582

Query: 674 RPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRT 713
               LPD +I  A+  + LA  GL    I    LS + +T
Sbjct: 583 ----LPDYFIPQATQQEALADLGLDTKGIEEKILSFIQKT 618


>gi|385206459|ref|ZP_10033329.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia sp. Ch1-1]
 gi|385186350|gb|EIF35624.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia sp. Ch1-1]
          Length = 650

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 272/639 (42%), Positives = 375/639 (58%), Gaps = 58/639 (9%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L  +++P  L+ L  ++L+ LA E+R+ +   VS+T   L S+L  VELT+ALH+VF  
Sbjct: 19  LLKTIDDPAALRRLDRRQLQPLADELRAFVLDSVSQTGGHLSSNLGTVELTIALHYVFDT 78

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+I+WDVG QTY HKILTGRR  +HTLR+  GISG+  R ESEYD F   H   S+SA
Sbjct: 79  PHDRIVWDVGHQTYPHKILTGRRDQMHTLRQLGGISGFPKRDESEYDTFGTAHSSTSISA 138

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDS-NMIVILNDSRHSLHPK 259
            LGMA+A  ++G     + VI +G   AG A+EA++NAG  D   ++VILND+  S+ P 
Sbjct: 139 ALGMAIASKLQGDNRMGIAVIGDGAMTAGMAFEALNNAGVEDDVPLLVILNDNDMSISP- 197

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                   + AL+  L+R+ S + +   R   + +  R+   M + A K++E+A+GMI P
Sbjct: 198 -------PVGALNRHLARLMSGRFYAAARAGVERVL-RVAPPMLDLARKLEEHAKGMIVP 249

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             +TLFEE G  YIGP+DGH+++ LI  LQ +  L   GP  +HVVT   ++ +  + +E
Sbjct: 250 --ATLFEEFGFNYIGPIDGHDLDSLIPTLQNIKEL--RGPQFLHVVT---KKGQGYKLAE 302

Query: 380 AIEKQQEGASDSNSL----PFGNYS-RTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
           A      G    N      P    S +TY   F E L   AE D  ++ +   M     +
Sbjct: 303 ADPVLYHGPGKFNPAEGIKPATTPSKKTYTQVFGEWLCDAAELDARVIGITPAMREGSGM 362

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F+++FP+RYFDVG+AEQHAVTF+ GLA  G+KP   I S FLQRAYDQ+++DV  Q L
Sbjct: 363 VEFEKRFPDRYFDVGIAEQHAVTFAGGLAAEGMKPVVAIYSTFLQRAYDQLIHDVALQNL 422

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PV F I  AGLVG+DG T  GA+D+ F+ C+PNM VMA SDE+E   M+ T A     P 
Sbjct: 423 PVVFAIDRAGLVGADGATHAGAYDLAFLRCIPNMTVMAASDENECRQMLYT-ALQQPNPT 481

Query: 555 CFRYPRG-----AIVR--TDLPGYRGIPIEIGKGKVLVE-----GKDVALLGYGAMVQNC 602
             RYPRG     A ++  T LP        +GKG++  E     GK +A+L +G MV   
Sbjct: 482 AVRYPRGSGTGVATIKQMTALP--------LGKGEIRRETSQPAGKRIAILAFGTMVAPS 533

Query: 603 LKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFI 661
           L A   L     D TVA+ RF KPLD  L+R+L + H  ++TVEEG + GG GS      
Sbjct: 534 LAAAEQL-----DATVANMRFVKPLDADLIRQLAETHDAIVTVEEGCVMGGAGS-----A 583

Query: 662 ALDGLLDSGVKWRPIV---LPDNYIEHASPTQQLALAGL 697
            ++ LL SGV  RP++   LPD +I+H  P + LA  GL
Sbjct: 584 CVEALLASGVT-RPVLQLGLPDRFIDHGDPAKLLAACGL 621


>gi|291613175|ref|YP_003523332.1| deoxyxylulose-5-phosphate synthase [Sideroxydans lithotrophicus
           ES-1]
 gi|291583287|gb|ADE10945.1| deoxyxylulose-5-phosphate synthase [Sideroxydans lithotrophicus
           ES-1]
          Length = 614

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 265/638 (41%), Positives = 380/638 (59%), Gaps = 49/638 (7%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+L  ++ P  L+ L   +L QLA E+R+ L   VSKT   L S+L  VELT+ALH+++ 
Sbjct: 3   PLLHTIDTPDDLRKLERAQLPQLADELRAFLIESVSKTGGHLSSNLGTVELTIALHYIYD 62

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG QTYAHKILTGRR+ +  LR   GISG+  R+ES YD F  GH   S+S
Sbjct: 63  TPEDRLVWDVGHQTYAHKILTGRRAAMGGLRMAHGISGFPKRNESRYDAFGTGHSSTSIS 122

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           A LGMAVA  + GK    V +I +G    G A+EA++NAG +D+N++VILND+  S+   
Sbjct: 123 AALGMAVAARLAGKDNRSVAIIGDGAMSGGMAFEALNNAGAMDANLLVILNDNDMSI--- 179

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLR----EVAKGMTKRIGRGMHEWAAKVDEYARG 315
                   + AL++ L+++ S + +  +R    ++ KGM   +     E+A + +E+ +G
Sbjct: 180 -----SRPVGALNNYLAKLMSGRFYAAMRRGSEKILKGMPPVL-----EFAKRAEEHVKG 229

Query: 316 MIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---RA 372
           M+ P   TLFEE G  YIGP+DGH+++ L+  L  +  L   GP  +H+VT++ +    A
Sbjct: 230 MVTP--GTLFEEFGFNYIGPIDGHDLDVLVETLGNIRKL--EGPQFLHIVTQKGKGYAHA 285

Query: 373 EDTQKSEAIEKQQEGASD-SNSLPFGNYSR-TYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
           ED    + +     G  D S+ +     ++ TY   F E L   A +D  +V +   M  
Sbjct: 286 ED----DCVLYHGVGKFDPSHGITAKPSTKPTYTQVFGEWLCDMAAQDARLVGITPAMCE 341

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              +  F EKFP+RYFDVG+AEQHA+TF+AGLAC G KP   I S FLQR YDQ+++D+ 
Sbjct: 342 GSGMVEFAEKFPQRYFDVGIAEQHALTFAAGLACDGFKPVVAIYSTFLQRGYDQLIHDIA 401

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q LPV   I   GLVG+DG T  G+FD++++  +PNM VMAP+DE E   M++T   + 
Sbjct: 402 IQNLPVVLAIDRGGLVGADGATHAGSFDLSYLRSVPNMTVMAPADEKECRQMLSTAFHL- 460

Query: 551 DRPVCFRYPRGA----IVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
           D P   RYPRG     +V+ DL   + IP  +GKG+V  EG  VA+L +G+M+   L+A 
Sbjct: 461 DTPSAVRYPRGTGPGVMVQKDL---QAIP--VGKGEVRREGGKVAILAFGSMLAPALEAA 515

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG 665
             L     D TVA+ RF KPLD +LV +L + H  L+TVEE ++ GG GS V+  +A  G
Sbjct: 516 GQL-----DATVANMRFVKPLDEELVLKLAREHALLVTVEENTLQGGAGSAVAECLARRG 570

Query: 666 LLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIA 703
           ++   V    + LPD ++E   P Q LA  GL  + IA
Sbjct: 571 IV---VPMLHLGLPDAFLEQGDPVQMLADCGLDANGIA 605


>gi|293335295|ref|NP_001170088.1| uncharacterized protein LOC100384006 [Zea mays]
 gi|224033365|gb|ACN35758.1| unknown [Zea mays]
 gi|413953254|gb|AFW85903.1| hypothetical protein ZEAMMB73_111194 [Zea mays]
          Length = 385

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 210/307 (68%), Positives = 258/307 (84%)

Query: 60  VSRICALPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEK 119
           + R+ ALPD+DDFFW+K+PTPILD ++ P+ LK+L+ KELKQLA E+RSE++ I+S+  +
Sbjct: 58  IQRVAALPDVDDFFWEKDPTPILDTIDAPIHLKNLSSKELKQLADEVRSEIAFIMSRKCQ 117

Query: 120 SLKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYT 179
              +  + VELT+A+H+VF+AP+DKILWD G+  YAHKILTGRRSL HT+ +K+G+SG+T
Sbjct: 118 PCGADRSVVELTIAIHYVFNAPMDKILWDAGQHAYAHKILTGRRSLFHTITQKNGLSGFT 177

Query: 180 SRSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAG 239
           SR ESEYDPF AGHGCNS+SAGLGMAVARDI G++  IVTVISN TTMAGQ YEAM +AG
Sbjct: 178 SRFESEYDPFGAGHGCNSLSAGLGMAVARDINGRKNRIVTVISNWTTMAGQVYEAMGHAG 237

Query: 240 YLDSNMIVILNDSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIG 299
           +LDSNM+VILNDS H+L PK +   K S+NA SS LS+IQSSK FR+ RE AKG+ K  G
Sbjct: 238 FLDSNMVVILNDSCHTLLPKADGGAKMSVNAFSSALSKIQSSKGFRRFREAAKGLAKWFG 297

Query: 300 RGMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGP 359
           +GMHE+AAKVDEYARGMIGP G+TLFEELGLYYIGP+DG NI+DLI VL+EVASL S GP
Sbjct: 298 KGMHEFAAKVDEYARGMIGPHGATLFEELGLYYIGPIDGRNIDDLICVLKEVASLDSTGP 357

Query: 360 VLVHVVT 366
           VLVHV+T
Sbjct: 358 VLVHVIT 364


>gi|255658172|ref|ZP_05403581.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mitsuokella multacida DSM
           20544]
 gi|260849480|gb|EEX69487.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mitsuokella multacida DSM
           20544]
          Length = 629

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 255/636 (40%), Positives = 381/636 (59%), Gaps = 35/636 (5%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+L+ +ENP  +K LT++EL+QLA E+R  +   VS+    L  +L  VELT+AL+ VF 
Sbjct: 3   PLLNRIENPEDVKKLTVRELEQLASELRHFIIDTVSQNGGHLAPNLGTVELTLALYSVFD 62

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P DK++WDVG Q Y+HKILTGRR    TLRKK GI+G+ +R ES YD F  GH   S+S
Sbjct: 63  FPADKLVWDVGHQAYSHKILTGRRDAFSTLRKKGGITGFPNRFESAYDAFGVGHASTSIS 122

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           A LGMA+ARD KG++  ++ VI +G    G+++EA++NAG L + +IVILND+  S+   
Sbjct: 123 AALGMALARDAKGEKNQVIAVIGDGALTGGESFEALNNAGDLGTKLIVILNDNEMSI--- 179

Query: 260 IEESPKTSINALSSTLSRIQSSKSF-RQLREVAKGMTK--RIGRGMHEWAAKVDEYARGM 316
                  ++ A+S  LSRI+ +  + R  R++   +     IG  +++ A+ + +  R +
Sbjct: 180 -----DANVGAMSEYLSRIRIAPQYARAKRDMGSLLMSIPHIGDKVYKTASHLKDGVRSV 234

Query: 317 IGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQ 376
           + P   +LFEE+G +YIGP+DGHNI  +  V +    +   GPVL+H+ T    + +  Q
Sbjct: 235 LVP--GSLFEEMGFHYIGPLDGHNIALMEEVFKSAKEM--EGPVLIHIHT---VKGKGYQ 287

Query: 377 KSEAIEKQQEGA-----SDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMD 431
            +E   ++  G      S   S      + +Y   F +AL+  A+   DI+ + A M   
Sbjct: 288 PAEQAPEKFHGVGCFDPSTGKSAKKAGCAPSYTSVFSQALIELAKDRPDILAITAAMPSG 347

Query: 432 LSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQ 491
             L+ F + +P+R+FDVG+AE+HA+T +AG+A GG+ P   + S F QRAYDQ+++DV  
Sbjct: 348 TGLKAFGKAYPKRFFDVGIAEEHAMTLAAGMAAGGMHPVIALYSTFAQRAYDQLIHDVCL 407

Query: 492 QRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDD 551
           Q LPV   +  AGLVG DGPT  G FD++++  +PNM VMAP DE+EL  M+AT  +I  
Sbjct: 408 QNLPVTLCLDRAGLVGEDGPTHHGVFDLSYLRQMPNMCVMAPKDEEELRHMLATAIAIPG 467

Query: 552 RPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSK 611
            P   RYPRGA +  +L       + +GK +VL EG  +A L  G MV+   +A A+L++
Sbjct: 468 -PAAVRYPRGAGLGVELTDSFE-KLSVGKAEVLQEGGSIAFLAVGTMVEQVKEAAAILAE 525

Query: 612 LGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSG 670
            GI+ TV + RF KPLD  L+  + +    +IT EE  + GGFGS V+ ++A     DSG
Sbjct: 526 EGIESTVVNMRFIKPLDTALIDAMAKTKKLIITAEENVLAGGFGSAVAEYLA-----DSG 580

Query: 671 VKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIA 703
            +  P+V   +PD +IE  +  + L+L GL    +A
Sbjct: 581 -QQVPLVRFGIPDRFIEQGTRKELLSLCGLQPEQMA 615


>gi|359782224|ref|ZP_09285446.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas
           psychrotolerans L19]
 gi|359370017|gb|EHK70586.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas
           psychrotolerans L19]
          Length = 643

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 259/633 (40%), Positives = 372/633 (58%), Gaps = 45/633 (7%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD +++P++L+ L   EL+ +A E+R+ L   V +T     + L  +ELTVALH+VF
Sbjct: 15  TPLLDRIDSPVQLRQLGDAELEAVADELRAFLLWTVGQTGGHFGAGLGVIELTVALHYVF 74

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+++WDVG Q Y HKILTGRR  + +LR+KDG++ +  RSESEYD F  GH   S+
Sbjct: 75  NTPEDRLVWDVGHQAYPHKILTGRREGMASLRQKDGLAAFPRRSESEYDTFGVGHSSTSI 134

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
            A LGMA+A  ++G     V VI +G   AG A+EA+++A    +NM+V+LND+  S+  
Sbjct: 135 GAALGMAIAAQLQGIERKSVAVIGDGALTAGMAFEALNHASDTGANMLVVLNDNDMSI-- 192

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                   ++  LS+ L+R+ SS++++ LRE  K    ++  G  E A + +E A+GM+ 
Sbjct: 193 ------SRNVGGLSNYLARLLSSRTYQHLRENGKKALSKL-PGAWEIARRTEEAAKGMLV 245

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR----RAED 374
           P   TLFEELG  YIGP+DGH++  L++ L+ +    + GP  +HV+T + +       D
Sbjct: 246 P--GTLFEELGWNYIGPIDGHDLPTLVTTLRNLRD--AKGPQFLHVITRKGKGLSIAEAD 301

Query: 375 TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
                AI K +      ++ P    +  Y + F + L   A  D  +V +   M+    L
Sbjct: 302 PIGYHAITKLEP----LDAKPKRPGAPKYSNIFGDWLCDMAAADAKLVGITPAMKEGSDL 357

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F E++PERYFDV +AEQHAVT +AGLAC G+KP   I S FLQR YDQ+++DV  Q L
Sbjct: 358 IRFAERYPERYFDVAIAEQHAVTLAAGLACDGMKPVVAIYSTFLQRGYDQLIHDVAVQNL 417

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
            V F I  AGLVG DGPT  G+FD++++ C+P M++MAPSDE+EL  ++ T       P 
Sbjct: 418 DVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMVIMAPSDENELRRLL-TTGYRHQGPA 476

Query: 555 CFRYPRGAIVRTDL-PGYRGIPIEIGKGKV-----LVEGKDVALLGYGAMVQNCLKARAL 608
             RYPRG+     L PG    P+ IGKG V     L  G  V  L +G  +   L+    
Sbjct: 477 AVRYPRGSGPNAALDPGLE--PLPIGKGVVRRQSSLKNGPKVGFLVFGVQLAEALQVAER 534

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLL 667
           L     D +VAD RF KPLD  L+R+   +H  L+TVEE S+ GG GS V+ F+  + L+
Sbjct: 535 L-----DASVADMRFVKPLDEALIRQFAADHDLLVTVEENSVMGGAGSAVNEFLQANALV 589

Query: 668 DSGVKWRPIV---LPDNYIEHASPTQQLALAGL 697
                 +P++   LPD+YIEHA P   LA  GL
Sbjct: 590 ------QPVLNLGLPDSYIEHAKPADMLAECGL 616


>gi|452204978|ref|YP_007485107.1| 1-deoxy-D-xylulose 5-phosphate synthase [Dehalococcoides mccartyi
           BTF08]
 gi|452112034|gb|AGG07765.1| 1-deoxy-D-xylulose 5-phosphate synthase [Dehalococcoides mccartyi
           BTF08]
          Length = 633

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 259/649 (39%), Positives = 378/649 (58%), Gaps = 38/649 (5%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           + +LD + +P  LK L++ EL++LAV+IR EL + V+     L SSL  VELT+ALH VF
Sbjct: 2   SKLLDTINSPSDLKKLSLDELRELAVQIREELVNRVTLNGGHLASSLGVVELTIALHRVF 61

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
            +P DKI+WDVG Q+YAHK+LTGRR    TLR+  G+SG+T R ES +DPF AGH   S+
Sbjct: 62  ESPKDKIIWDVGHQSYAHKLLTGRREQFATLRQHGGLSGFTCRDESPHDPFGAGHASTSI 121

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVARD+  +   +++VI +G    G ++EA++NAG+L +  IVILND+  ++ P
Sbjct: 122 SAGLGMAVARDLAKEDYSVISVIGDGAISGGMSFEAINNAGHLHTKFIVILNDNGMAISP 181

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVD---EYARG 315
                   S  ALS  L+ ++    F   +  AK     +  G   WA       ++ + 
Sbjct: 182 --------STGALSKFLNNVRFDPRFEFAKRNAKQTITNMPFGKAVWAFTKSIKRKFEKS 233

Query: 316 MIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDT 375
           M+     +L+EELG  Y+GPVDGHNI +L + L+      S  PVL+H++T++ +  +D 
Sbjct: 234 ML---PGSLWEELGFIYLGPVDGHNIRELEAALKRAKDFESK-PVLIHMITKKGKGYDDA 289

Query: 376 Q----KSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMD 431
           +    K   I  +  G   S+ L       +Y   F + L     ++  +V + A M   
Sbjct: 290 EADAVKYHGISPKSGGLKSSHGL-------SYSQVFGQTLHKIMSQNPQVVAITAAMTDG 342

Query: 432 LSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQ 491
             L      FP+R FDVG+ EQHAVTF+AG+A  G  P  +I S FLQR +DQ+++DV  
Sbjct: 343 CGLGEIAAAFPDRVFDVGICEQHAVTFAAGMATQGYIPVVVIYSTFLQRGFDQIIHDVCL 402

Query: 492 QRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDD 551
           Q+LPV F I   G+VG DG T  G FD++FMS +P+M+V APSDE++L  ++ T  +   
Sbjct: 403 QKLPVVFAIDRGGIVGDDGKTHQGIFDLSFMSLIPDMVVSAPSDENDLQHLIYTAVN-SG 461

Query: 552 RPVCFRYPR----GAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARA 607
           +P   RYPR    GA + + L     IP  IG+ ++LV G DVA+L  G  V     A  
Sbjct: 462 KPFALRYPRGFGEGAEIESSL---HNIP--IGQNEILVNGSDVAILATGKSVAFAKDALE 516

Query: 608 LLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGL 666
           +L++ GI  T+ + R+  PLD +LV ++ Q+H +L+TVEE  I GG GS ++  +A  GL
Sbjct: 517 ILTESGIKPTLVNNRYISPLDSELVLKIAQSHKYLVTVEENVISGGLGSRINTLLAEAGL 576

Query: 667 LDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTRE 715
           ++  +K   I +PD ++EH + +   A  GL G  IA   L L+G   E
Sbjct: 577 VNK-IKIANIGIPDKFVEHGNQSLLRAKYGLDGKGIAQRVLYLVGNPNE 624


>gi|418531678|ref|ZP_13097589.1| 1-deoxy-D-xylulose-5-phosphate synthase [Comamonas testosteroni
           ATCC 11996]
 gi|371451180|gb|EHN64221.1| 1-deoxy-D-xylulose-5-phosphate synthase [Comamonas testosteroni
           ATCC 11996]
          Length = 622

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 259/634 (40%), Positives = 379/634 (59%), Gaps = 36/634 (5%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L  + +P  ++ L+  +LK LA E+R+ +   VS+T   L S+L  VELTVALH VF+ 
Sbjct: 8   LLHNINDPADMRGLSRSQLKSLAAELRTYVIDSVSRTGGHLSSNLGTVELTVALHSVFNT 67

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+I+WDVG QTY HKILTGRR  + TLR+  G+SG+  R+ESEYD F   H   S+SA
Sbjct: 68  PYDRIVWDVGHQTYPHKILTGRRDRMGTLRQFGGLSGFPQRAESEYDTFGTAHSSTSISA 127

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKI 260
            LGMA+A   KG+    + VI +G   AG A+EA++N G  D+N++VILND+  S+ P  
Sbjct: 128 ALGMALAAKQKGEDRRAIAVIGDGAMTAGMAFEALNNGGVHDANLLVILNDNDMSISP-- 185

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQ 320
                  + AL+  L+++ S + + + R+V K + K++   + E A ++++ A+GM+ P 
Sbjct: 186 ------PVGALNRYLAQLMSGQFYAKARDVGKSVLKQV-PPLLELAKRLEQQAKGMVVP- 237

Query: 321 GSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSEA 380
            +T+FE+ G  YIGP+DGH+++ LI  L+ +  L   GP  +HVVT   ++ +  + +EA
Sbjct: 238 -ATMFEQFGFNYIGPIDGHDLDSLIPTLENIKGL--KGPQFLHVVT---KKGQGYKLAEA 291

Query: 381 IEKQQEGASDSNSL-----PFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQ 435
                 G    +       P     +T+   F   L   A KD+ +V +   M     + 
Sbjct: 292 DPVAYHGPGKFDPAVGLVKPATPAKQTFTQVFGHWLCDMAAKDQRLVGITPAMREGSGMV 351

Query: 436 LFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLP 495
            F ++FP RY+DVG+AEQHAVTF+ G+AC G+KP   I S FLQRAYDQ+++DV  Q LP
Sbjct: 352 EFHKRFPGRYYDVGIAEQHAVTFAGGMACEGVKPVVAIYSTFLQRAYDQLIHDVALQNLP 411

Query: 496 VRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVC 555
           V F +  AGLVG+DG T  GA+DI F+ C+PNM +  P+DE E   +++T A     PVC
Sbjct: 412 VVFALDRAGLVGADGATHAGAYDIAFVRCIPNMSMACPADERETRQLLST-AYEQHHPVC 470

Query: 556 FRYPRGAIVR-TDLPGYRGIPIEIGKGKVLVE--GKDVALLGYGAMVQNCLKARALLSKL 612
            RYPRGA V  T L    G+P   GKG++  E   K VA+L +G+++   L+A   L   
Sbjct: 471 VRYPRGAGVGVTPLESLEGLP--FGKGEMRRESASKKVAILAFGSLLYPALQAAEAL--- 525

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGV 671
             D +VA+ R+ KPLD +L+ ++   H  ++T+EEG I GG GS V   +A  GL  S +
Sbjct: 526 --DASVANMRWAKPLDEELLLQIAAEHELIVTLEEGCIMGGAGSAVMESLAAHGLSKSVL 583

Query: 672 KWRPIVLPDNYIEHASPTQQLALAGLTGHHIAAT 705
           +   + LPD +IEH  P + LAL GL    I A+
Sbjct: 584 Q---LGLPDEFIEHGDPAKLLALQGLDAAGIEAS 614


>gi|337286893|ref|YP_004626366.1| deoxyxylulose-5-phosphate synthase [Thermodesulfatator indicus DSM
           15286]
 gi|335359721|gb|AEH45402.1| deoxyxylulose-5-phosphate synthase [Thermodesulfatator indicus DSM
           15286]
          Length = 634

 Score =  451 bits (1159), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 262/634 (41%), Positives = 367/634 (57%), Gaps = 34/634 (5%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L+ V +P  LK   +++L++L  E+R  +   V++T   L  +L  +ELTVALH+VF +
Sbjct: 4   LLEKVNSPADLKKFRLRQLEKLTEELREVIVKTVAETGGHLAPNLGVIELTVALHYVFDS 63

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P DKI+WDVG Q YAHK+LTGRR   HTLR+  GI+G+  RSES +D  + GH   S+SA
Sbjct: 64  PKDKIVWDVGHQAYAHKLLTGRRDKFHTLRQYGGIAGFPKRSESPHDIVDVGHSSTSISA 123

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKI 260
            LG+  A+D   +   +V VI +G+  AG A+E ++NAG+L  ++IVILND+  S+ P  
Sbjct: 124 ALGLVTAQDFLKQEGKVVVVIGDGSMTAGLAFEGLNNAGHLKKDLIVILNDNEMSISP-- 181

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAA--KVDEYARGMIG 318
                 ++ ALSS LSR  +    R+L+   +     +  G H   A  K ++  + ++ 
Sbjct: 182 ------NVGALSSFLSRKLTGPVARRLKRELESFVSHLPGGEHLVTAIRKSEDAIKCLLT 235

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR----RAED 374
           P    LFE LG  Y+GP+ GHN+E LI  L+ V +L   GP LVHV+T++ +      E+
Sbjct: 236 P--GMLFEALGFRYVGPIPGHNLETLIDTLRNVKNL--EGPTLVHVLTKKGKGYRPAEEE 291

Query: 375 TQKSEAIE----KQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
            +K   +     K  +  +  N  P      +Y   F + +V   E +  +V + A M  
Sbjct: 292 PEKFHGLGPFDIKTGKPKTSKNKPP------SYTSVFSKTMVRLGEMEPRLVAITAAMPS 345

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L+ F E+FPER+FDVG+AEQHAVTF+AGLA GG+ P C I S FLQRA+DQ+++DV 
Sbjct: 346 GTGLKAFSERFPERFFDVGIAEQHAVTFAAGLALGGMIPVCAIYSTFLQRAFDQIIHDVA 405

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
              L V F I  AG+VG DGPT  G FD+T++  +PNMIVMAP DE+EL  M+ T     
Sbjct: 406 LTNLHVVFAIDRAGIVGEDGPTHQGQFDLTYLRLIPNMIVMAPKDENELQHMLYTAVKCQ 465

Query: 551 DRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLS 610
             PV  RYPRGA     L  +    I IGKG++  EG+D+ L+  G MV   LKA  LL+
Sbjct: 466 G-PVAVRYPRGAGEGASL-DWELKEIPIGKGEIFREGEDILLVAIGNMVYPALKAADLLA 523

Query: 611 KLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-IGGFGSHVSHFIALDGLLDS 669
           K G+  TV +ARF KPLD  L+ E       ++T+EE + +GGFGS V       GL   
Sbjct: 524 KEGLSATVINARFVKPLDEDLITEWALRTGRVVTIEENTLLGGFGSAVLELFQQKGLR-- 581

Query: 670 GVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIA 703
               + I LPD +IEH +P       GLT   IA
Sbjct: 582 -FPVKRIGLPDKFIEHGAPALLREKYGLTPEKIA 614


>gi|261378199|ref|ZP_05982772.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria cinerea ATCC
           14685]
 gi|269145669|gb|EEZ72087.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria cinerea ATCC
           14685]
          Length = 637

 Score =  451 bits (1159), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 266/645 (41%), Positives = 376/645 (58%), Gaps = 53/645 (8%)

Query: 78  PTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHV 137
           P+P+LDL+++P  L+ L  K+L Q+A E+R  L   V +T     S+L AVELTVALH+V
Sbjct: 3   PSPLLDLIDSPQDLRRLDKKQLPQVAAELREFLLESVGQTGGHFASNLGAVELTVALHYV 62

Query: 138 FHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNS 197
           ++ P DK++WDVG Q+Y HKILTGR++ +HT+R+  G++G+  RSESEYD F  GH   S
Sbjct: 63  YNTPEDKLVWDVGHQSYPHKILTGRKNQMHTMRRYGGLAGFPKRSESEYDAFGVGHSSTS 122

Query: 198 VSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLH 257
           + A LGMA A  I G     V +I +G   AGQA+EA++ AG +D N++VILND+  S+ 
Sbjct: 123 IGAALGMAAADKILGSDRRSVAIIGDGAMTAGQAFEALNCAGDMDVNLLVILNDNEMSIS 182

Query: 258 PKIEESPK-------TSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVD 310
           P +   PK         +  L ST+ + QSSK   +L             G  E A KV+
Sbjct: 183 PNVGALPKYLASNVVRDMRGLLSTI-KAQSSKVLDKL------------PGAMELAQKVE 229

Query: 311 EYARGMIGP-----QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVV 365
              + + G      Q  +LFE  G  Y GPVDGHN+E L+ VL+++ S    GP L+HV+
Sbjct: 230 HKIKTLAGEAEHARQSLSLFENFGFRYTGPVDGHNVEHLVDVLKDLRS--RKGPQLLHVI 287

Query: 366 TEEN---RRAE-DTQKSEAIEKQQEGASDSNSLPFGNY---SRTYDDCFIEALVMEAEKD 418
           T++    + AE D  K  A+    + ++    +P  N      TY   F + L  +A  D
Sbjct: 288 TKKGNGYKLAENDPVKYHAVANLPKDSTAETPMPSENKPAAKPTYTQVFGKWLCDQAAAD 347

Query: 419 KDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFL 478
             +  +   M     L  F+++FP+RYFDVG+AEQHAVTF+ GLAC G+KP   I S FL
Sbjct: 348 SRLAAITPAMREGSGLVEFEQQFPDRYFDVGIAEQHAVTFAGGLACEGMKPVVAIYSTFL 407

Query: 479 QRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDE 538
           QRAYDQ+V+D+  Q LPV F +  AG+VG+DGPT  G +D++F+ C+PNMIV APSDE+E
Sbjct: 408 QRAYDQLVHDIALQNLPVLFAVDRAGIVGADGPTHAGLYDLSFLRCVPNMIVAAPSDENE 467

Query: 539 LVDMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGI-PIEIGKGKVLVEGKDVALLGYGA 597
              +++T     D P   RYPRG    T  P   G+  +EIGKG +  EG+  A + +G+
Sbjct: 468 CRLLLSTCYQA-DAPAAVRYPRG--TGTGAPVSDGMETVEIGKGIIRREGEKTAFIAFGS 524

Query: 598 MVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-IGGFGSH 656
           MV   L   A+  KL  + TVAD RF KP+D +L+  L Q+H +++T EE +  GG GS 
Sbjct: 525 MVAPAL---AVAEKL--NATVADMRFVKPIDEELIVRLAQSHDYIVTAEENAEQGGAGSA 579

Query: 657 VSHFIALDGLLDSGVKWRPIVL---PDNYIEHASPTQQLALAGLT 698
           V   +A  G+       +P++L    D   EH  P + L   GL+
Sbjct: 580 VLEVLAKHGIC------KPVLLLGVADTVTEHGDPKKLLDDLGLS 618


>gi|298492661|ref|YP_003722838.1| deoxyxylulose-5-phosphate synthase ['Nostoc azollae' 0708]
 gi|298234579|gb|ADI65715.1| deoxyxylulose-5-phosphate synthase ['Nostoc azollae' 0708]
          Length = 635

 Score =  451 bits (1159), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 255/647 (39%), Positives = 376/647 (58%), Gaps = 25/647 (3%)

Query: 82  LDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAP 141
           L  + +P +L  L+I++L+Q+A +IR +    V+ T   L   L  VELT+ L+      
Sbjct: 3   LSEITHPNQLHGLSIRQLQQIARQIRDKHLQTVAATGGHLGPGLGVVELTLGLYQTLDLD 62

Query: 142 VDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAG 201
            DK++WDVG Q Y HK++TGR S  HTLR+KDG++GY  R E+++D F AGH   S+SA 
Sbjct: 63  RDKVIWDVGHQAYPHKLITGRYSNFHTLRQKDGVAGYLKRCENKFDHFGAGHASTSISAA 122

Query: 202 LGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPKI 260
           LGMA+ARD+KG++   V VI +G    G A EA+++AG+L  +N++V+LND+  S+ P +
Sbjct: 123 LGMALARDLKGEKFKSVAVIGDGALTGGMALEAINHAGHLPKTNLLVVLNDNEMSISPNV 182

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQ 320
              P+       S   +  S     QL+ +       +G  +     ++ E  + +  P+
Sbjct: 183 GAIPRYLNKMRLSPPVQFLSDGIEEQLKHIP-----FVGESISPELERIKEGMKRLAVPK 237

Query: 321 GSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSEA 380
              +FEELG  Y+GP+DGHN+E+LI+  Q+   +   GPVLVHVVT + +  E  +K + 
Sbjct: 238 VGAVFEELGFTYMGPMDGHNLEELIATFQQAHKI--TGPVLVHVVTTKGKGYELAEKDQV 295

Query: 381 IEKQQE------GASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
               Q       G +  +S P       Y   F   LV  AE++  IV + A M     L
Sbjct: 296 GYHAQNPFNLATGKAIPSSKP---KPPAYAKVFSHTLVKLAEQNPKIVGITAAMATGTGL 352

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
              Q K P +Y DVG+AEQHAVT +AGLA  G++P   I S FLQRAYDQ+++DV  Q L
Sbjct: 353 DKLQAKLPNQYIDVGIAEQHAVTLAAGLAAEGMRPVAAIYSTFLQRAYDQIIHDVCIQNL 412

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PV F +  +G+VG+DGPT  G +DI +M C+PNM+VMAP DE EL  MV T  +    P+
Sbjct: 413 PVFFCLDRSGIVGADGPTHQGMYDIAYMRCIPNMVVMAPKDEAELQRMVVTGINHTTSPI 472

Query: 555 CFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGI 614
             R+PRG      L      P+EIGKG++L +G DV +LGYG MV   ++A  +LS+ GI
Sbjct: 473 SMRFPRGNGHGVPLMEEGWEPLEIGKGEILRQGDDVLILGYGTMVYPSMQAAEILSEHGI 532

Query: 615 DVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSG--V 671
           + TV +ARF KPLD +L+  L +    ++++EEG + GGFGS V+     + L+D+   V
Sbjct: 533 EATVINARFVKPLDTELIVPLAKQIGRVVSLEEGCLMGGFGSAVA-----EALMDANVLV 587

Query: 672 KWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALL 718
             + I +PD  ++HA+P +  A+ GL+   I  T L    +   A++
Sbjct: 588 PVKRIGVPDILVDHATPDESFAVLGLSSRQIVETVLQAFFKKELAVV 634


>gi|392960817|ref|ZP_10326282.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pelosinus fermentans DSM
           17108]
 gi|421054425|ref|ZP_15517393.1| deoxyxylulose-5-phosphate synthase [Pelosinus fermentans B4]
 gi|421071287|ref|ZP_15532407.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pelosinus fermentans A11]
 gi|392440783|gb|EIW18443.1| deoxyxylulose-5-phosphate synthase [Pelosinus fermentans B4]
 gi|392447203|gb|EIW24457.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pelosinus fermentans A11]
 gi|392454714|gb|EIW31536.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pelosinus fermentans DSM
           17108]
          Length = 629

 Score =  451 bits (1159), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 261/649 (40%), Positives = 391/649 (60%), Gaps = 41/649 (6%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           IL+ ++ P  LK L+ +++K LA EIR  L   VSKT   L  +L  VELT+A+H VF++
Sbjct: 4   ILEGIDKPQDLKKLSHEQIKLLAEEIRHFLICSVSKTGGHLAPNLGVVELTLAIHKVFNS 63

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P+DKI+WDVG Q+Y HK+LTGRR    TLR+  GISG+   SES +D F  GH   S+SA
Sbjct: 64  PIDKIVWDVGHQSYVHKVLTGRRDGFATLRQFGGISGFPKISESVHDFFGTGHSSTSISA 123

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKI 260
            LGMA+ARDI G +E I+ VI +G+   GQAYEA+++AG+  +NMIVILND+        
Sbjct: 124 ALGMALARDIAGDKEHILAVIGDGSLTGGQAYEALNHAGHTGTNMIVILNDN-------- 175

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKR---IGRGMHEWAAKVDEYARGMI 317
           E S   ++ A+S  LS+I++   + ++++  + + +R   IG  + +   +V +  R ++
Sbjct: 176 EMSIAKNVGAMSEYLSKIRTEPKYTKIKQDIEFLLRRIPAIGESVAKTVERVKDSLRYLL 235

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQK 377
            P    LFEELG  YIGP+DGHN + L  VL++   +   GP+L+HV+T    + +  + 
Sbjct: 236 VP--GVLFEELGFNYIGPIDGHNFQLLSEVLEKAKKM--QGPILIHVLT---CKGKGYKP 288

Query: 378 SEAIEKQQEGAS----DSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
           +E    +  G      +S  +     + TY   F + L+  A++DK IV + A M     
Sbjct: 289 AECNPDKFHGVGPYCIESGEVIKNGNTPTYTAIFGDTLLHLAKQDKRIVAITAAMPEGTG 348

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L+ F  +FP+R+FDVG+AEQ+AVT +AG+A  G++P   + S F QRAYDQ+++D+  Q+
Sbjct: 349 LKKFAAEFPKRFFDVGIAEQNAVTMAAGMATKGMRPVVALYSTFAQRAYDQILHDICLQK 408

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPV F +  AG+VG DGPT  G FD +++  +PN+ +MAP DE+EL  MV T  + +  P
Sbjct: 409 LPVLFALDRAGIVGEDGPTHHGLFDYSYLRHIPNLTIMAPKDENELRHMVFTALNTNG-P 467

Query: 554 VCFRYPRGAIVRTDLPGYRGIPIE-------IGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
           V  RYPRG  +        G+PI+       IG    +  G ++A L  G+MV+ C++AR
Sbjct: 468 VAIRYPRGNGL--------GVPIDQSLQQLTIGVADEVKNGTNMAFLAVGSMVETCIEAR 519

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG 665
            +L+  GI  +V +ARF KPLD +++R++C+N   +ITVEE  + GGFGS V  +I  D 
Sbjct: 520 EILASEGILASVINARFIKPLDEQMIRKVCKNVGIIITVEENILAGGFGSSVLEYIH-DQ 578

Query: 666 LLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTR 714
            +D GV    +  PD +IE  +  Q L   GL    IA+ A S + + +
Sbjct: 579 NID-GVNVLRLGFPDQFIEQGARKQILEKYGLHAAGIASAAKSYIQKIK 626


>gi|78045077|ref|YP_360804.1| 1-deoxy-D-xylulose-5-phosphate synthase [Carboxydothermus
           hydrogenoformans Z-2901]
 gi|118595500|sp|Q3AAN0.1|DXS_CARHZ RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|77997192|gb|ABB16091.1| 1-deoxy-D-xylulose-5-phosphate synthase [Carboxydothermus
           hydrogenoformans Z-2901]
          Length = 622

 Score =  451 bits (1159), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 251/627 (40%), Positives = 366/627 (58%), Gaps = 30/627 (4%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           PIL+ +  P  +K L   EL  LA E+R  + ++ S+    L  SL  VELT+ALH VF 
Sbjct: 3   PILERISLPEDIKKLKPSELMALAQELREYIITVASQNGGHLAPSLGVVELTIALHFVFE 62

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
           AP DKI+WDVG Q YAHKILTGR+    TLR   G+SG+  R ES YD F  GH   S+S
Sbjct: 63  APKDKIIWDVGHQAYAHKILTGRKKQFKTLRTFGGLSGFPKRDESPYDAFGVGHSSTSIS 122

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           A LGMA+ARD+KG++  +V VI +G    G A+EA+++AG+L   +IV++ND+  S+   
Sbjct: 123 AALGMALARDLKGEQYEVVAVIGDGALTGGMAFEALNHAGHLQKKLIVVVNDNEMSI--- 179

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKR---IGRGMHEWAAKVDEYARGM 316
                  ++ ALS+ LSRI++   + + ++  + + K+   IG  M +   ++ +  + +
Sbjct: 180 -----AQNVGALSAYLSRIRTDPKYSRGKDELEALIKKIPHIGPTMVKIGERLKDSFKYL 234

Query: 317 IGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR----RA 372
           + P    LFEELG  Y+GP+DGHNI+++I V     +    GPV+VHV+T++ +      
Sbjct: 235 LVP--GMLFEELGFTYLGPIDGHNIKEMIEVFSRAKTFA--GPVVVHVITKKGKGYHWAE 290

Query: 373 EDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
           E+      + K      +    P      ++ + F +ALV  A+   ++V + A M    
Sbjct: 291 ENPDGFHGVGKFYISTGEPVEAP----RVSFTEVFGKALVELAQDRPEVVAITAAMPTGT 346

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            L  F + +PER++DVG+AEQHAVT +AG+AC GLKP   I S FLQR++DQ+++DV  Q
Sbjct: 347 GLNYFAQNYPERFYDVGIAEQHAVTMAAGMACEGLKPVVAIYSTFLQRSFDQIIHDVCLQ 406

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
            LPV F +  AG+VG DGPT  G FD++++  +PN+ +M P +ED L  M+ T  +    
Sbjct: 407 NLPVVFAVDRAGIVGEDGPTHHGIFDLSYLRMIPNLTIMVPRNEDMLRKMLFTALN-HSG 465

Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
           PV  RYPRGA V  +L  Y  +P  IG  ++L EG D  ++G G  +   LKA   L   
Sbjct: 466 PVALRYPRGAAVGVELTPYEQLP--IGTAEILKEGSDGVVIGVGRPLNYALKAAQKLENE 523

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGV 671
           GI +TV DARF KPLD KL+ E+   H  +ITVEE  + GGFGS V+ + +  G+   G 
Sbjct: 524 GISLTVIDARFVKPLDYKLLEEVGSLHKPVITVEENVVAGGFGSAVNEYFSFRGI---GT 580

Query: 672 KWRPIVLPDNYIEHASPTQQLALAGLT 698
           K   + + D +  H    + L L GLT
Sbjct: 581 KVVNLGIADEFPPHGKVEEILNLYGLT 607


>gi|421057126|ref|ZP_15520016.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pelosinus fermentans B3]
 gi|421067750|ref|ZP_15529194.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pelosinus fermentans A12]
 gi|392448105|gb|EIW25309.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pelosinus fermentans A12]
 gi|392463681|gb|EIW39580.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pelosinus fermentans B3]
          Length = 639

 Score =  451 bits (1159), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 261/649 (40%), Positives = 391/649 (60%), Gaps = 41/649 (6%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           IL+ ++ P  LK L+ +++K LA EIR  L   VSKT   L  +L  VELT+A+H VF++
Sbjct: 14  ILEGIDKPQDLKKLSHEQIKLLAEEIRHFLICSVSKTGGHLAPNLGVVELTLAIHKVFNS 73

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P+DKI+WDVG Q+Y HK+LTGRR    TLR+  GISG+   SES +D F  GH   S+SA
Sbjct: 74  PIDKIVWDVGHQSYVHKVLTGRRDGFATLRQFGGISGFPKISESVHDFFGTGHSSTSISA 133

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKI 260
            LGMA+ARDI G +E I+ VI +G+   GQAYEA+++AG+  +NMIVILND+        
Sbjct: 134 ALGMALARDIAGDKEHILAVIGDGSLTGGQAYEALNHAGHTGTNMIVILNDN-------- 185

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKR---IGRGMHEWAAKVDEYARGMI 317
           E S   ++ A+S  LS+I++   + ++++  + + +R   IG  + +   +V +  R ++
Sbjct: 186 EMSIAKNVGAMSEYLSKIRTEPKYTKIKQDIEFLLRRIPAIGESVAKTVERVKDSLRYLL 245

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQK 377
            P    LFEELG  YIGP+DGHN + L  VL++   +   GP+L+HV+T    + +  + 
Sbjct: 246 VP--GVLFEELGFNYIGPIDGHNFQLLSEVLEKAKKM--QGPILIHVLT---CKGKGYKP 298

Query: 378 SEAIEKQQEGAS----DSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
           +E    +  G      +S  +     + TY   F + L+  A++DK IV + A M     
Sbjct: 299 AECNPDKFHGVGPYCIESGEVIKNGNTPTYTAIFGDTLLHLAKQDKRIVAITAAMPEGTG 358

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L+ F  +FP+R+FDVG+AEQ+AVT +AG+A  G++P   + S F QRAYDQ+++D+  Q+
Sbjct: 359 LKKFAAEFPKRFFDVGIAEQNAVTMAAGMATKGMRPVVALYSTFAQRAYDQILHDICLQK 418

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPV F +  AG+VG DGPT  G FD +++  +PN+ +MAP DE+EL  MV T  + +  P
Sbjct: 419 LPVLFALDRAGIVGEDGPTHHGLFDYSYLRHIPNLTIMAPKDENELRHMVFTALNTNG-P 477

Query: 554 VCFRYPRGAIVRTDLPGYRGIPIE-------IGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
           V  RYPRG  +        G+PI+       IG    +  G ++A L  G+MV+ C++AR
Sbjct: 478 VAIRYPRGNGL--------GVPIDQSLQQLTIGVADEVKNGTNMAFLAVGSMVETCIEAR 529

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG 665
            +L+  GI  +V +ARF KPLD +++R++C+N   +ITVEE  + GGFGS V  +I  D 
Sbjct: 530 EILASEGILASVINARFIKPLDEQMIRKVCKNVGIIITVEENILAGGFGSSVLEYIH-DQ 588

Query: 666 LLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTR 714
            +D GV    +  PD +IE  +  Q L   GL    IA+ A S + + +
Sbjct: 589 NID-GVNVLRLGFPDQFIEQGARKQILEKYGLHAAGIASAAKSYIQKIK 636


>gi|260583061|ref|ZP_05850843.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           NT127]
 gi|260093912|gb|EEW77818.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           NT127]
          Length = 625

 Score =  451 bits (1159), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 260/639 (40%), Positives = 375/639 (58%), Gaps = 32/639 (5%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+L L+ +P  L+ L   +L QL  E+R+ L   VS+T   L S L  VELTVALH+V+ 
Sbjct: 9   PLLSLINSPEDLRLLNKDQLPQLCQELRAYLLESVSQTSGHLASGLGTVELTVALHYVYK 68

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG Q Y HKILTGRR  + T+R+KDGI  +  R ESE+D  + GH   S+S
Sbjct: 69  TPFDQLIWDVGHQAYPHKILTGRREQMSTIRQKDGIHPFPWREESEFDVLSVGHSSTSIS 128

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           AGLG+AVA + +      V VI +G   AG A+EA+++AG L ++M+VILND+  S+   
Sbjct: 129 AGLGIAVAAERENAGRKTVCVIGDGAITAGMAFEALNHAGALHTDMLVILNDNEMSI--- 185

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                  ++ AL++ L+RI S   +  LR+ +K +  ++   +  +  K +E+ +G++  
Sbjct: 186 -----SENVGALNNHLARIFSGSLYSTLRDGSKKILDKV-PPIKNFMKKTEEHMKGVMFS 239

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             STLFEELG  YIGPVDGHNIE+L++ L  + +L   GP  +H+ T++ +     +K  
Sbjct: 240 PESTLFEELGFNYIGPVDGHNIEELVATLTNMRNL--KGPQFLHIKTKKGKGYAPAEKDP 297

Query: 380 -AIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQ 438
                  +    S  LP  N   TY   F + L   AEKD  I+ +   M     +  F 
Sbjct: 298 IGFHGVPKFDPISGELPKNNSKPTYSKIFGDWLCEMAEKDAKIIGITPAMREGSGMVEFS 357

Query: 439 EKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRF 498
           ++FP++YFDV +AEQHAVTF+ GLA GG KP   I S FLQRAYDQ+++DV  Q LPV F
Sbjct: 358 QRFPKQYFDVAIAEQHAVTFATGLAIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPVLF 417

Query: 499 VITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRY 558
            I  AG+VG+DG T  GAFD++FM C+PNMI+M PSDE+E   M+ T      +P   RY
Sbjct: 418 AIDRAGIVGADGATHQGAFDLSFMRCIPNMIIMTPSDENECRQMLYTGYQC-GKPAAVRY 476

Query: 559 PRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTV 618
           PRG  V   L     +P  IGK +++ +G+ +A+L +G ++ + L+   L  KL  + TV
Sbjct: 477 PRGNAVGVKLTPLEMLP--IGKSRLIRKGQKIAILNFGTLLPSALE---LSEKL--NATV 529

Query: 619 ADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG----LLDSGVKW 673
            D RF KP+DI+++  L Q H +L+T+EE +I GG GS V+  +   G    LL  G   
Sbjct: 530 VDMRFVKPIDIEMINVLAQTHDYLVTLEENAIQGGAGSAVAEILNSSGKSTALLQLG--- 586

Query: 674 RPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
               LPD +I  A+  + LA  GL    I    L+ + +
Sbjct: 587 ----LPDYFIPQATQQEALADLGLDTKGIEEKILNFIAK 621


>gi|411117534|ref|ZP_11390021.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oscillatoriales
           cyanobacterium JSC-12]
 gi|410713637|gb|EKQ71138.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oscillatoriales
           cyanobacterium JSC-12]
          Length = 636

 Score =  450 bits (1158), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 254/645 (39%), Positives = 380/645 (58%), Gaps = 25/645 (3%)

Query: 82  LDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAP 141
           L  + +P +L SL+  +L+Q+A +IR +    V+ T   L   L  VELT+AL++     
Sbjct: 3   LSELTHPNQLHSLSTYQLQQIARQIREKHLETVAATGGHLGPGLGVVELTIALYYTLDLD 62

Query: 142 VDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAG 201
            DK++WDVG Q Y HK+LTGR S  HTLR+KDGI+GY  RSES++D F AGH   S+SA 
Sbjct: 63  QDKVIWDVGHQAYPHKMLTGRYSRFHTLRQKDGIAGYLKRSESKFDHFGAGHASTSISAA 122

Query: 202 LGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPKI 260
           LGMA+ARD+KG++  +V VI +G    G A EA+++AG+L  +N++V+LND+  S+ P  
Sbjct: 123 LGMALARDLKGEKFKVVAVIGDGALTGGMALEAINHAGHLPKTNLLVVLNDNEMSISP-- 180

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKR---IGRGMHEWAAKVDEYARGMI 317
                 ++ A+   L++++ S   + L +  +   K    +G  +     ++ E  + + 
Sbjct: 181 ------NVGAIPRYLNKLRLSPPVQFLSDNLEEQLKHLPFVGESLSPDLNRLKEGMKRLA 234

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQK 377
            P+   +FEELG  Y+GP+DGHN+E+LI+  Q+     + GPVLVHV T + +  E  ++
Sbjct: 235 VPKVGAVFEELGFTYMGPIDGHNLEELIATFQQAHK--TPGPVLVHVATVKGKGYEVAEQ 292

Query: 378 SEAIEKQQE--GASDSNSLPFGN-YSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
            +     Q     +   ++P        Y   F E L   AE +  ++ + A M     L
Sbjct: 293 DQVGYHAQNPFNIATGKAIPSTKPKPPGYSKVFGETLTKIAENNPKVIGITAAMATGTGL 352

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
            + Q++ P++Y DVG+AEQHAVT +AGLAC G++P   I S FLQRA+DQ+V+DV  Q+L
Sbjct: 353 DILQKRLPDQYIDVGIAEQHAVTLAAGLACEGMRPVAAIYSTFLQRAFDQIVHDVCIQKL 412

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PV F +  AG+VG+DGPT  G +DI ++ C+PNM++MAP DE EL  M+ T     D  +
Sbjct: 413 PVFFCLDRAGIVGADGPTHQGMYDIAYLRCIPNMVLMAPKDEAELQRMIVTGIEYTDGAI 472

Query: 555 CFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGI 614
             RYPRG      L      P+EIGKG++L  G DV L+ YG+MV   ++   +L + GI
Sbjct: 473 ALRYPRGNGYGVPLMEEGWEPLEIGKGEILRTGDDVLLVAYGSMVYPSMQTSEILHEHGI 532

Query: 615 DVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDS--GV 671
           + TV +ARF KPLD +L+  L +    ++T+EEG + GGFGS V+     + LLD+   V
Sbjct: 533 EATVVNARFAKPLDTELILPLAEKIGRVVTLEEGCLPGGFGSAVA-----EALLDADISV 587

Query: 672 KWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREA 716
               I +PD  ++HASP Q  A  GLT   +A   L+     ++A
Sbjct: 588 SLTRIGVPDILVDHASPDQSKASLGLTPAQMAERILTKFFSQQQA 632


>gi|434399693|ref|YP_007133697.1| 1-deoxy-D-xylulose-5-phosphate synthase [Stanieria cyanosphaera PCC
           7437]
 gi|428270790|gb|AFZ36731.1| 1-deoxy-D-xylulose-5-phosphate synthase [Stanieria cyanosphaera PCC
           7437]
          Length = 636

 Score =  450 bits (1158), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 255/644 (39%), Positives = 374/644 (58%), Gaps = 23/644 (3%)

Query: 82  LDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAP 141
           L  + +P +L  L+I++L+ +A +IR +    ++ +   L   L  VELT+AL+      
Sbjct: 3   LSEITHPNQLHGLSIRQLEDIARQIREKHLQTIATSGGHLGPGLGVVELTIALYQTLDLD 62

Query: 142 VDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAG 201
            DK++WDVG Q Y HK+LTGR +  HTLR+KDGI+GY  R E+++D F AGH   S+SA 
Sbjct: 63  RDKVVWDVGHQAYPHKMLTGRYNRFHTLRQKDGIAGYLKRCENKFDHFGAGHASTSISAA 122

Query: 202 LGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPKI 260
           LGMA+ARD KG+    V VI +G    G A EA+++AG+L ++N++VILND+  S+ P  
Sbjct: 123 LGMALARDAKGEDYKCVAVIGDGALTGGMALEAINHAGHLPNTNLMVILNDNEMSISP-- 180

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRI---GRGMHEWAAKVDEYARGMI 317
                 ++ A+S  L++++ S   + L +  +   K +   G  +     +V E  + + 
Sbjct: 181 ------NVGAISRYLNKVRLSDPIQFLSDNLEEQFKHLPFFGDSLTPEMERVKEGMKRLA 234

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQK 377
            P+   + EELG  Y GP+DGHN+++LIS  ++   +   GPVLVHV T + +     +K
Sbjct: 235 VPKVGAVIEELGFKYFGPIDGHNLQELISTFKQAHKV--TGPVLVHVATVKGKGYAIAEK 292

Query: 378 SEAIEKQQE--GASDSNSLPFGNYSR--TYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
            +     Q     +   ++P  N  +  +Y   F   L   AE +  I+ + A M     
Sbjct: 293 DQVGYHAQSPFNLATGKAIP-SNKPKPPSYAKVFTHTLTKLAENNPKIIGITAAMATGTG 351

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L   Q+K P++Y DVG+AEQHAVT SAGLAC G++P   I S FLQRAYDQ+++D+  Q 
Sbjct: 352 LDKLQQKLPKQYIDVGIAEQHAVTLSAGLACEGMRPLVAIYSTFLQRAYDQIIHDICIQN 411

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPV F +  AG+VG+DGPT  G +DI ++ C+PNM++MAP DE EL  M+ T     D P
Sbjct: 412 LPVFFCMDRAGIVGADGPTHQGMYDIAYLRCIPNMVIMAPKDEAELQRMIVTGIDHTDSP 471

Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
           +  RYPRG  V   L       IEIGKG++L  G DV LLGYG MV   L+   +LS+ G
Sbjct: 472 IAMRYPRGNGVGVPLMEEGWEAIEIGKGEILRNGDDVLLLGYGTMVHPALQVAEILSEHG 531

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVK 672
           I+ TV +ARF KPLD +L+  L Q    ++T+EEG + GGFGS V+  +  + +L   V 
Sbjct: 532 IEATVVNARFVKPLDTELILPLAQRIGKVVTMEEGCLMGGFGSAVTEALQDNNVL---VP 588

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREA 716
            +   +PD  ++HA P Q  A  GLT   +A   L     T++A
Sbjct: 589 VKRFGIPDILVDHAEPNQSKADLGLTSSQMAENILKAYFPTKQA 632


>gi|329908092|ref|ZP_08274827.1| 1-deoxy-D-xylulose 5-phosphate synthase [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327546762|gb|EGF31698.1| 1-deoxy-D-xylulose 5-phosphate synthase [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 616

 Score =  450 bits (1158), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 269/652 (41%), Positives = 381/652 (58%), Gaps = 61/652 (9%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+L+ +  P  L+ L   +L++LA E+R+ +   VSKT   L S+L  VELT+ALH+VF+
Sbjct: 2   PLLEKINQPADLRRLPRNQLRKLADELRAFVIDSVSKTGGHLSSNLGTVELTIALHYVFN 61

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG QTY HKILTGRR  +HTLR++DGISG+  R+ESEYD F   H   S+S
Sbjct: 62  TPEDRLVWDVGHQTYPHKILTGRRDQMHTLRQRDGISGFPRRAESEYDTFGTAHSSTSIS 121

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAG-YLDSNMIVILNDSRHSLHP 258
           A LGMA+A   KG+    V +I +G   AG  +EAM+NAG Y D N++VILND+  S+ P
Sbjct: 122 AALGMALAARTKGENRHAVAIIGDGAMTAGMVFEAMNNAGVYDDINLLVILNDNDMSISP 181

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                    + AL+  L+R+ S K +   R V K +   +   + E A + +E+A+GM+ 
Sbjct: 182 --------PVGALNQYLARLMSGKFYAAARNVGKSV---LPAPVLELAKRFEEHAKGMVV 230

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
           P  +T+FEE G  YIGP+DGH+++ LI  LQ +  L   GP  +HVVT   ++ +  + +
Sbjct: 231 P--ATMFEEFGFNYIGPIDGHDLDALIPTLQNLKHL--KGPQFLHVVT---KKGQGYKLA 283

Query: 379 EAIEKQQEGASDSN--------SLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
           EA      G    N        ++P      TY   F + L   A +DK ++ +   M  
Sbjct: 284 EADPVLYHGPGKFNPEVGIKPATVP---AKMTYTQVFGDWLCDMAAQDKRLIGITPAMRE 340

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              +  F+++FP RYFDVG+AEQHAVTF+AG+A  GLKP   I S FLQR YDQ+++DV 
Sbjct: 341 GSGMVRFEQQFPARYFDVGIAEQHAVTFAAGMATEGLKPVLAIYSTFLQRGYDQLIHDVA 400

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q L V F +  AGLVG+DG T  G +D+ F+ C+PNM+VMA SDE+E   M+ T   + 
Sbjct: 401 LQDLDVTFALDRAGLVGADGATHAGNYDMAFLRCIPNMVVMAASDENECRQML-TTGYLY 459

Query: 551 DRPVCFRYPRGA-------IVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCL 603
             P   RYPRGA          T LP        +GK +V  +G+ VA+L +G MV    
Sbjct: 460 PGPAAVRYPRGAGPGVAITAPLTALP--------MGKAEVRRQGERVAILAFGTMV---- 507

Query: 604 KARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIA 662
            A +L++   ++ TV + RF KPLD++LVREL   H  ++TVEEG++ GG GS V+  +A
Sbjct: 508 -APSLVAGERLNATVVNMRFVKPLDVELVRELALTHDAIVTVEEGALMGGAGSAVAEALA 566

Query: 663 LDGLLDSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
             G++      RPI+   LPD +I+H    Q LA  GL    I  +     G
Sbjct: 567 AAGMV------RPILHLGLPDQFIDHGDVGQLLAGVGLDAEGIVRSVQQRFG 612


>gi|237510266|ref|ZP_04522981.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           MSHR346]
 gi|235002471|gb|EEP51895.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           MSHR346]
          Length = 634

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 271/641 (42%), Positives = 382/641 (59%), Gaps = 46/641 (7%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L  +++P  L+ L  ++L+ LA E+R+ +   VSKT   L S+L  VELT+ALH+VF+ 
Sbjct: 4   LLKTIDDPADLRRLDRRQLQPLADELRAFVLDSVSKTGGHLSSNLGTVELTIALHYVFNT 63

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+I+WDVG QTY HKILTGRR  + TLR+ DGISG+  RSESEYD F   H   S+SA
Sbjct: 64  PDDRIVWDVGHQTYPHKILTGRRDGMKTLRQFDGISGFPRRSESEYDTFGTAHSSTSISA 123

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPK 259
            LGMA+   + G     + VI +G   AG A+EAM+NAG   D+ ++VILND+  S+ P 
Sbjct: 124 ALGMAIGSKLNGDDRFSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDNDMSISP- 182

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                   + AL+  L+R+ S + +   R   + +   +   + E A K++E+A+GM+ P
Sbjct: 183 -------PVGALNRHLARLMSGRFYAAARAGVERVLS-VAPPVLELARKLEEHAKGMVVP 234

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             +TLFEE G  YIGP+DGH+++ LI  LQ +  L   GP  +HVVT   ++ +  + +E
Sbjct: 235 --ATLFEEFGFNYIGPIDGHDLDSLIPTLQNIKEL--RGPQFLHVVT---KKGQGYKLAE 287

Query: 380 AIEKQQEGASDSNSLPFGNYS-----RTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
           A      G    N       S     +TY   F E L   AE D  +V +   M     +
Sbjct: 288 ADPVLYHGPGKFNPAEGIKPSTTPAKKTYTQVFGEWLCDAAELDARVVGITPAMREGSGM 347

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F+++FPERY+DVG+AEQHAVTF+ GLA  GLKP   I S FLQRAYDQ+++DV  Q L
Sbjct: 348 VEFEKRFPERYYDVGIAEQHAVTFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNL 407

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PV F I  AGLVG+DG T  GA+D+ F+ C+PNM VMA SDE+E   M+ T A     P 
Sbjct: 408 PVVFAIDRAGLVGADGATHAGAYDLAFLRCIPNMTVMAASDENECRQMLHT-ALQQPNPT 466

Query: 555 CFRYPRGAIVR-TDLPGYRGIPIEIGKGKVL-----VEGKDVALLGYGAMVQNCLKARAL 608
             RYPRGA      +  +  IP  +GKG+V       +GK +A+L +G MV     A +L
Sbjct: 467 AVRYPRGAGTGVATVKAFTEIP--LGKGEVRRRTSQPDGKRIAILAFGTMV-----APSL 519

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLL 667
            +   +D TVA+ RF KP+D +LV+ L + H +L+TVEEG + GG GS       ++ ++
Sbjct: 520 AAADALDATVANMRFVKPIDAELVQALARTHDYLVTVEEGCVMGGAGS-----ACVEAMM 574

Query: 668 DSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAAT 705
           +SGV  RP++   LPD +++H  P + L+L GL G  IA +
Sbjct: 575 ESGV-VRPVLQLGLPDRFVDHGDPAKLLSLCGLDGDGIAKS 614


>gi|148826942|ref|YP_001291695.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           PittGG]
 gi|166198621|sp|A5UEV6.1|DXS_HAEIG RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|148718184|gb|ABQ99311.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           PittGG]
          Length = 625

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 260/639 (40%), Positives = 375/639 (58%), Gaps = 32/639 (5%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+L L+ +P  L+ L   +L QL  E+R+ L   VS+T   L S L  VELTVALH+V+ 
Sbjct: 9   PLLSLINSPEDLRLLNKDQLPQLCQELRAYLLESVSQTSGHLASGLGTVELTVALHYVYK 68

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG Q Y HKILTGRR  + T+R+K GI  +  R ESE+D  + GH   S+S
Sbjct: 69  TPFDQLIWDVGHQAYPHKILTGRREQMSTIRQKGGIHPFPWREESEFDVLSVGHSSTSIS 128

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           AGLG+AVA + +      V VI +G+  AG A+EA+++AG L ++M+VILND+  S+   
Sbjct: 129 AGLGIAVAAERENASRKTVCVIGDGSITAGMAFEALNHAGALHTDMLVILNDNEMSI--- 185

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                  ++ AL++ L+RI S   +  LR+ +K +  ++   +  +  K +E+ +G++  
Sbjct: 186 -----SENVGALNNHLARIFSGSLYSTLRDGSKKILDKV-PPIKNFMKKTEEHMKGVMFS 239

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             STLFEELG  YIGPVDGHNI++L++ L  + +L   GP  +H+ T++ +     +K  
Sbjct: 240 PESTLFEELGFNYIGPVDGHNIDELVATLTNMRNL--KGPQFLHIKTKKGKGYAPAEKDP 297

Query: 380 -AIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQ 438
                  +    S  LP  N   TY   F + L   AEKD  I+ +   M     +  F 
Sbjct: 298 IGFHGVPKFDPISGELPKNNSKPTYSKIFGDWLCEMAEKDAKIIGITPAMREGSGMVEFS 357

Query: 439 EKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRF 498
           ++FP++YFDV +AEQHAVTF+ GLA GG KP   I S FLQRAYDQ+++DV  Q LPV F
Sbjct: 358 QRFPKQYFDVAIAEQHAVTFATGLAIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPVLF 417

Query: 499 VITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRY 558
            I  AG+VG+DG T  GAFDI+FM C+PNMI+M PSDE+E   M+ T      +P   RY
Sbjct: 418 AIDRAGIVGADGATHQGAFDISFMRCIPNMIIMTPSDENECRQMLYTGYQC-GKPAAVRY 476

Query: 559 PRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTV 618
           PRG  V   L     +P  IGK +++ EG+ +A+L +G ++ + L+   L  KL  + TV
Sbjct: 477 PRGNAVGVKLTPLEMLP--IGKSRLIREGQKIAILNFGTLLPSALE---LSEKL--NATV 529

Query: 619 ADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG----LLDSGVKW 673
            D RF KP+DI+++  L Q H +L+T+EE +I GG GS V+  +   G    LL  G   
Sbjct: 530 VDMRFVKPIDIEMINMLAQTHDYLVTLEENAIQGGAGSAVAEVLNSSGKSTALLQLG--- 586

Query: 674 RPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
               LPD +I  A+  + LA  GL    I    L+ + +
Sbjct: 587 ----LPDYFIPQATQQEALADLGLDTKGIEEKILNFIAK 621


>gi|145636151|ref|ZP_01791821.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           PittHH]
 gi|148825982|ref|YP_001290735.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           PittEE]
 gi|229846703|ref|ZP_04466810.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           7P49H1]
 gi|166198620|sp|A5UC51.1|DXS_HAEIE RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|145270673|gb|EDK10606.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           PittHH]
 gi|148716142|gb|ABQ98352.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           PittEE]
 gi|229810192|gb|EEP45911.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           7P49H1]
          Length = 625

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 260/639 (40%), Positives = 376/639 (58%), Gaps = 32/639 (5%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+L L+ +P  L+ L   +L QL  E+R+ L   VS+T   L S L  VELTVALH+V+ 
Sbjct: 9   PLLSLINSPEDLRLLNKDQLPQLCQELRAYLLESVSQTSGHLASGLGTVELTVALHYVYK 68

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG Q Y HKILTGRR  + T+R+KDGI  +  R ESE+D  + GH   S+S
Sbjct: 69  TPFDQLIWDVGHQAYPHKILTGRREQMSTIRQKDGIHPFPWREESEFDVLSVGHSSTSIS 128

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           AGLG+AVA + +      V VI +G   AG A+EA+++AG L ++M+VILND+  S+   
Sbjct: 129 AGLGIAVAAERENAGRKTVCVIGDGAITAGMAFEALNHAGALHTDMLVILNDNEMSI--- 185

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                  ++ AL++ L+RI S   +  LR+ +K +  ++   +  +  K +E+ +G++  
Sbjct: 186 -----SENVGALNNHLARIFSGSLYSTLRDGSKKILDKV-PPIKNFMKKTEEHMKGVMFS 239

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             STLFEELG  YIGPVDGHNI++L+++L  + +L   GP  +H+ T++ +     +K  
Sbjct: 240 PESTLFEELGFNYIGPVDGHNIDELVAMLTNMRNL--KGPQFLHIKTKKGKGYAPAEKDP 297

Query: 380 -AIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQ 438
                  +    S  LP  N   TY   F + L   AEKD  I+ +   M     +  F 
Sbjct: 298 IGFHGVPKFDPISGELPKNNSKPTYSKIFGDWLCEMAEKDAKIIGITPAMREGSGMVEFS 357

Query: 439 EKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRF 498
           ++FP++YFDV +AEQHAVTF+ GLA GG KP   I S FLQRAYDQ+++DV  Q LPV F
Sbjct: 358 QRFPKQYFDVAIAEQHAVTFATGLAIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPVLF 417

Query: 499 VITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRY 558
            I  AG+VG+DG T  GAFDI+FM C+PNMI+M PSDE+E   M+ T      +P   RY
Sbjct: 418 AIDRAGIVGADGATHQGAFDISFMRCIPNMIIMTPSDENECRQMLYTGYQC-GKPAAVRY 476

Query: 559 PRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTV 618
           PRG  V   L     +P  IGK +++ +G+ +A+L +G ++ + L+   L  KL  + TV
Sbjct: 477 PRGNAVGVKLTPLEMLP--IGKSRLIRKGQKIAILNFGTLLPSALE---LSEKL--NATV 529

Query: 619 ADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG----LLDSGVKW 673
            D RF KP+DI+++  L Q H +L+T+EE +I GG GS V+  +   G    LL  G   
Sbjct: 530 VDMRFVKPIDIEMINVLAQTHDYLVTLEENAIQGGAGSAVAEVLNSSGKSTALLQLG--- 586

Query: 674 RPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
               LPD +I  A+  + LA  GL    I    L+ + +
Sbjct: 587 ----LPDYFIPQATQQEALADLGLDTKGIEEKILNFIAK 621


>gi|126443346|ref|YP_001063527.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           668]
 gi|134278298|ref|ZP_01765012.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           305]
 gi|167915841|ref|ZP_02502932.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           112]
 gi|217422468|ref|ZP_03453971.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           576]
 gi|166198605|sp|A3NMF6.1|DXS_BURP6 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|126222837|gb|ABN86342.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           668]
 gi|134250082|gb|EBA50162.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           305]
 gi|217394699|gb|EEC34718.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           576]
          Length = 634

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 271/641 (42%), Positives = 382/641 (59%), Gaps = 46/641 (7%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L  +++P  L+ L  ++L+ LA E+R+ +   VSKT   L S+L  VELT+ALH+VF+ 
Sbjct: 4   LLKTIDDPADLRRLDRRQLQPLADELRAFVLDSVSKTGGHLSSNLGTVELTIALHYVFNT 63

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+I+WDVG QTY HKILTGRR  + TLR+ DGISG+  RSESEYD F   H   S+SA
Sbjct: 64  PDDRIVWDVGHQTYPHKILTGRRDGMKTLRQFDGISGFPRRSESEYDTFGTAHSSTSISA 123

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPK 259
            LGMA+   + G     + VI +G   AG A+EAM+NAG   D+ ++VILND+  S+ P 
Sbjct: 124 ALGMAIGSKLNGDDRFSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDNDMSISP- 182

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                   + AL+  L+R+ S + +   R   + +   +   + E A K++E+A+GM+ P
Sbjct: 183 -------PVGALNRHLARLMSGRFYAAARAGVERVLS-VAPPVLELARKLEEHAKGMVVP 234

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             +TLFEE G  YIGP+DGH+++ LI  LQ +  L   GP  +HVVT   ++ +  + +E
Sbjct: 235 --ATLFEEFGFNYIGPIDGHDLDSLIPTLQNIKEL--RGPQFLHVVT---KKGQGYKLAE 287

Query: 380 AIEKQQEGASDSNSLPFGNYS-----RTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
           A      G    N       S     +TY   F E L   AE D  +V +   M     +
Sbjct: 288 ADPVLYHGPGKFNPAEGIKPSTTPAKKTYTQVFGEWLCDAAELDARVVGITPAMREGSGM 347

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F+++FPERY+DVG+AEQHAVTF+ GLA  GLKP   I S FLQRAYDQ+++DV  Q L
Sbjct: 348 VEFEKRFPERYYDVGIAEQHAVTFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNL 407

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PV F I  AGLVG+DG T  GA+D+ F+ C+PNM VMA SDE+E   M+ T A     P 
Sbjct: 408 PVVFAIDRAGLVGADGATHAGAYDLAFLRCIPNMTVMAASDENECRQMLHT-ALQQPNPT 466

Query: 555 CFRYPRGAIVR-TDLPGYRGIPIEIGKGKVL-----VEGKDVALLGYGAMVQNCLKARAL 608
             RYPRGA      +  +  IP  +GKG+V       +GK +A+L +G MV     A +L
Sbjct: 467 AVRYPRGAGTGVATVKAFTEIP--LGKGEVRRRTSQPDGKRIAILAFGTMV-----APSL 519

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLL 667
            +   +D TVA+ RF KP+D +LV+ L + H +L+TVEEG + GG GS       ++ ++
Sbjct: 520 AAADALDATVANMRFVKPIDAELVQALARTHDYLVTVEEGCVMGGAGS-----ACVEAMM 574

Query: 668 DSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAAT 705
           +SGV  RP++   LPD +++H  P + L+L GL G  IA +
Sbjct: 575 ESGV-VRPVLQLGLPDRFVDHGDPAKLLSLCGLDGDGIAKS 614


>gi|452203543|ref|YP_007483676.1| 1-deoxy-D-xylulose 5-phosphate synthase [Dehalococcoides mccartyi
           DCMB5]
 gi|452110602|gb|AGG06334.1| 1-deoxy-D-xylulose 5-phosphate synthase [Dehalococcoides mccartyi
           DCMB5]
          Length = 633

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 257/646 (39%), Positives = 376/646 (58%), Gaps = 32/646 (4%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           + +LD + +P  LK L++ EL++LAV+IR EL + V+     L SSL  VELT+ALH VF
Sbjct: 2   SKLLDTINSPSDLKKLSLDELRELAVQIREELVNRVTLNGGHLASSLGVVELTIALHRVF 61

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
            +P DKI+WDVG Q+YAHK+LTGRR    TLR+  G+SG+T R ES +DPF AGH   S+
Sbjct: 62  ESPKDKIIWDVGHQSYAHKLLTGRREQFATLRQHGGLSGFTCRDESPHDPFGAGHASTSI 121

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVARD+  +   +++VI +G    G ++EA++NAG+L +  IVILND+  ++ P
Sbjct: 122 SAGLGMAVARDLAKEDYSVISVIGDGAISGGMSFEAINNAGHLHTKFIVILNDNGMAISP 181

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVD---EYARG 315
                   S  ALS  L+ ++    F   +  AK     +  G   WA       ++ + 
Sbjct: 182 --------STGALSKFLNNVRFDPRFEFAKRNAKQTITNMPFGKAVWAFTKSIKRKFEKS 233

Query: 316 MIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDT 375
           M+     +L+EELG  Y+GPVDGHNI +L + L+      S  PVL+H++T++ +  +D 
Sbjct: 234 ML---PGSLWEELGFIYLGPVDGHNIRELEAALKRAKDFESK-PVLIHMITKKGKGYDDA 289

Query: 376 Q----KSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMD 431
           +    K   I  +  G   S+ L       +Y   F + L     ++  +V + A M   
Sbjct: 290 EADAVKYHGISPKSGGLKSSHGL-------SYSQVFGQTLHKIMSQNPQVVAITAAMTDG 342

Query: 432 LSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQ 491
             L      FP+R FDVG+ EQHAVTF+AG+A  G  P  +I S FLQR +DQ+++DV  
Sbjct: 343 CGLGEIAAAFPDRVFDVGICEQHAVTFAAGMATQGYIPVVVIYSTFLQRGFDQIIHDVCL 402

Query: 492 QRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDD 551
           Q+LPV F I   G+VG DG T  G FD++FMS +P+M+V APSDE++L  ++ T  +   
Sbjct: 403 QKLPVVFAIDRGGIVGDDGKTHQGIFDLSFMSLIPDMVVSAPSDENDLQHLIYTAVN-SG 461

Query: 552 RPVCFRYPRGAIVRTDL-PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLS 610
           +P   RYPRG     ++      IP  IG+ ++LV G DVA+L  G  V     A  +L+
Sbjct: 462 KPFALRYPRGFGEGVEIESSLHNIP--IGQNEILVNGSDVAILATGKSVAFAKDALEILT 519

Query: 611 KLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDS 669
           + GI  T+ +  +  PLD +LV ++ Q+H +L+TVEE  I GG GS ++  +A  GL++ 
Sbjct: 520 ESGIKPTLVNNHYISPLDSELVLKIAQSHKYLVTVEENVISGGLGSRINTLLAEAGLVNK 579

Query: 670 GVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTRE 715
            +K   I +PD ++EH + +   A  GL G  IA   LSL+G   E
Sbjct: 580 -IKIANIGIPDKFVEHGNQSLLRAKYGLDGKGIAQRVLSLVGNPNE 624


>gi|323702780|ref|ZP_08114440.1| deoxyxylulose-5-phosphate synthase [Desulfotomaculum nigrificans
           DSM 574]
 gi|323532297|gb|EGB22176.1| deoxyxylulose-5-phosphate synthase [Desulfotomaculum nigrificans
           DSM 574]
          Length = 639

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 263/640 (41%), Positives = 381/640 (59%), Gaps = 35/640 (5%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           IL  + +P  L++L  KEL+ LA EIR  L + VS T   L  +L  VELT+A+H VF++
Sbjct: 4   ILKTIYSPQDLQNLDYKELQCLAREIRETLINTVSVTGGHLAPNLGVVELTIAIHRVFNS 63

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
            VD+I+WDVG Q+Y HK+LTGR++   TLR+  G+SG+  R ES +D F+ GH   S+SA
Sbjct: 64  AVDRIIWDVGHQSYVHKLLTGRQAQFSTLRQYGGLSGFPKRDESIHDAFDTGHSSTSISA 123

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKI 260
            LGM +ARD+KG++  +V VI +G+   G A+EA+++AG+L  N+IVILND+  S+ P  
Sbjct: 124 ALGMVLARDLKGEKYSVVAVIGDGSMTGGMAFEALNHAGHLKKNLIVILNDNEMSIAP-- 181

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRG--MHEWAAKVDEYARGMIG 318
                 ++ ALSS LS +++   + + ++    + ++I  G  + +   ++ +  + ++ 
Sbjct: 182 ------NVGALSSYLSSLRTDPKYSRSKDEIAELLQKIPHGPKLLKVVDRLKDSLKYLVV 235

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
           P    LFEELG  Y+GPVDGH+I+ + ++L++  +LG  GPVLVHV+T++ +  E  +K+
Sbjct: 236 P--GMLFEELGFTYLGPVDGHDIKAVTTMLKQAKNLG--GPVLVHVLTKKGKGYEPAEKN 291

Query: 379 EAIEKQQEGASDS-----NSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
             +     G  D        +P      +Y   F + ++  A++D  I+ + A M     
Sbjct: 292 PDL-FHGVGPFDVVTGAIKKIP--GAPPSYTQIFGQTMINLAKQDDKIIGITAAMPSGTG 348

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L  F ++FP RYFDVG+AEQHAVT +AGLA GG +P   I S FLQRAYDQV++DV  Q 
Sbjct: 349 LNKFAQEFPNRYFDVGIAEQHAVTMAAGLAAGGYRPVVAIYSTFLQRAYDQVLHDVCLQN 408

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPV F +  AGLVG DGPT  G FD+ ++  +PNM++MAP DE+EL  M+ T A   + P
Sbjct: 409 LPVTFALDRAGLVGDDGPTHHGVFDLAYLRSIPNMVIMAPKDENELQHMLKT-AVYHNAP 467

Query: 554 VCFRYPRGA----IVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALL 609
              RYPRGA     + + L       I IG+ +VL +G+DV LL  G MV   LKA   L
Sbjct: 468 TAVRYPRGAGEGVAIDSQLQ-----TIPIGQAEVLWDGEDVVLLAIGNMVPEALKAAENL 522

Query: 610 SKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLD 668
              GI   V +AR+ KPLD +L+         L+TVEE  + GGFGS V   +   GL  
Sbjct: 523 RAQGISAAVINARYVKPLDEELILHYAARTGHLVTVEEHVLMGGFGSAVLELLERAGL-- 580

Query: 669 SGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALS 708
           S VK + I +PD ++EH       A  GLT   IA T L+
Sbjct: 581 SEVKVKRIGIPDCFVEHGKQKILRANYGLTAEGIAETVLA 620


>gi|145632791|ref|ZP_01788524.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           3655]
 gi|145634983|ref|ZP_01790690.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           PittAA]
 gi|144986447|gb|EDJ93013.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           3655]
 gi|145267849|gb|EDK07846.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           PittAA]
          Length = 625

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 260/639 (40%), Positives = 376/639 (58%), Gaps = 32/639 (5%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+L L+ +P  L+ L   +L QL  E+R+ L   VS+T   L S L  VELTVALH+V+ 
Sbjct: 9   PLLSLINSPEDLRLLNKDQLPQLCQELRAYLLESVSQTSGHLASGLGTVELTVALHYVYK 68

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG Q Y HKILTGRR  + T+R+KDGI  +  R ESE+D  + GH   S+S
Sbjct: 69  TPFDQLIWDVGHQAYPHKILTGRREQMSTIRQKDGIHPFPWREESEFDVLSVGHSSTSIS 128

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           AGLG+AVA + +      V VI +G   AG A+EA+++AG L ++M+VILND+  S+   
Sbjct: 129 AGLGIAVAAERENAGRKTVCVIGDGAITAGMAFEALNHAGALHTDMLVILNDNEMSI--- 185

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                  ++ AL++ L+RI S   +  LR+ +K +  ++   +  +  K +E+ +G++  
Sbjct: 186 -----SENVGALNNHLARIFSGSLYSTLRDGSKKILDKV-PPIKNFMKKTEEHMKGVMFS 239

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             STLFEELG  YIGPVDGHNI++L+++L  + +L   GP  +H+ T++ +     +K  
Sbjct: 240 PESTLFEELGFNYIGPVDGHNIDELVAMLTNMRNL--KGPQFLHIKTKKGKGYAPAEKDP 297

Query: 380 -AIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQ 438
                  +    S  LP  N   TY   F + L   AEKD  I+ +   M     +  F 
Sbjct: 298 IGFHGVPKFDPISGELPKNNSKPTYSKIFGDWLCEMAEKDAKIIGITPAMREGSGMVEFS 357

Query: 439 EKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRF 498
           ++FP++YFDV +AEQHAVTF+ GLA GG KP   I S FLQRAYDQ+++DV  Q LPV F
Sbjct: 358 QRFPKQYFDVAIAEQHAVTFATGLAIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPVLF 417

Query: 499 VITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRY 558
            I  AG+VG+DG T  GAFDI+FM C+PNMI+M PSDE+E   M+ T      +P   RY
Sbjct: 418 AIDRAGIVGADGATHQGAFDISFMRCIPNMIIMTPSDENECRQMLYTGYQC-GKPAAVRY 476

Query: 559 PRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTV 618
           PRG  V   L     +P  IGK +++ +G+ +A+L +G ++ + L+   L  KL  + TV
Sbjct: 477 PRGNAVGVKLTPLEMLP--IGKSRLIRKGQKIAILNFGTLLPSALE---LSEKL--NATV 529

Query: 619 ADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG----LLDSGVKW 673
            D RF KP+DI+++  L Q H +L+T+EE +I GG GS V+  +   G    LL  G   
Sbjct: 530 VDMRFVKPIDIEMINVLAQTHDYLVTLEENAIQGGAGSAVAEVLNSSGKSTALLQLG--- 586

Query: 674 RPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
               LPD +I  A+  + LA  GL    I    L+ + +
Sbjct: 587 ----LPDYFIPQATRQEALADLGLDTKGIEEKILNFIAK 621


>gi|221065760|ref|ZP_03541865.1| deoxyxylulose-5-phosphate synthase [Comamonas testosteroni KF-1]
 gi|220710783|gb|EED66151.1| deoxyxylulose-5-phosphate synthase [Comamonas testosteroni KF-1]
          Length = 622

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 254/633 (40%), Positives = 377/633 (59%), Gaps = 34/633 (5%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L  + +P  ++ L+  +LK LA E+R+ +   VS+T   L S+L  VELTVALH VF+ 
Sbjct: 8   LLHNINDPADMRGLSRAQLKTLAAELRTYVIDSVSRTGGHLSSNLGTVELTVALHSVFNT 67

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+I+WDVG QTY HKILTGRR  + TLR+  G+SG+  R+ESEYD F   H   S+SA
Sbjct: 68  PYDRIVWDVGHQTYPHKILTGRRDHMATLRQFGGLSGFPQRAESEYDTFGTAHSSTSISA 127

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKI 260
            LGMA+A   KG+    + VI +G   AG A+EA++N G  D+N++VILND+  S+ P  
Sbjct: 128 ALGMALAAKQKGEDRRAIAVIGDGAMTAGMAFEALNNGGVHDANLLVILNDNDMSISP-- 185

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQ 320
                  + AL+  L+++ S + + + R+V K + K++   + E A ++++ A+GM+ P 
Sbjct: 186 ------PVGALNRYLAQLMSGQFYAKARDVGKSVLKQV-PPLLELAKRLEQQAKGMVVP- 237

Query: 321 GSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSEA 380
            +T+FE+ G  YIGP+DGH+++ LI  L+ +  L   GP  +HVVT++  +     +++ 
Sbjct: 238 -ATMFEQFGFNYIGPIDGHDLDSLIPTLENIKGL--KGPQFLHVVTKKG-QGYKLAEADP 293

Query: 381 IEKQQEGASD------SNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
           +     G  D       ++ P     +T+   F   L   A KD+ +V +   M     +
Sbjct: 294 VAYHGPGKFDPAVGLVKSATP---AKQTFTQVFGHWLCDMAAKDQRLVGITPAMREGSGM 350

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F ++FP RY+DVG+AEQHAVTF+ G+AC G+KP   I S FLQRAYDQ+++DV  Q L
Sbjct: 351 VEFHKRFPGRYYDVGIAEQHAVTFAGGMACEGVKPVVAIYSTFLQRAYDQLIHDVALQNL 410

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PV F +  AGLVG+DG T  GA+DI F+ C+PNM +  P+DE E   ++ T A   D PV
Sbjct: 411 PVVFALDRAGLVGADGATHAGAYDIAFVRCIPNMSMACPADERETRQLL-TTAYEQDHPV 469

Query: 555 CFRYPRGAIV-RTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
           C RYPRGA V  T L    G+P   G+ +     + VA+L +G ++   L+A   L    
Sbjct: 470 CVRYPRGAGVGMTPLESLEGLPFGKGEMRRESSSRKVAILAFGTLLYPALQAAEAL---- 525

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVK 672
            D +VA+ R+ KPLD  L+ ++   H  ++T+EEG + GG GS V   +A +GL  S ++
Sbjct: 526 -DASVANMRWAKPLDEALLLKIAAEHELIVTLEEGCVMGGAGSAVMECLAANGLSRSVLQ 584

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAAT 705
              + LPD +IEH  P + LAL GL    I A+
Sbjct: 585 ---LGLPDAFIEHGDPAKLLALQGLDAAGIEAS 614


>gi|403523639|ref|YP_006659208.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           BPC006]
 gi|403078706|gb|AFR20285.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           BPC006]
          Length = 651

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 271/641 (42%), Positives = 382/641 (59%), Gaps = 46/641 (7%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L  +++P  L+ L  ++L+ LA E+R+ +   VSKT   L S+L  VELT+ALH+VF+ 
Sbjct: 21  LLKTIDDPADLRRLDRRQLQPLADELRAFVLDSVSKTGGHLSSNLGTVELTIALHYVFNT 80

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+I+WDVG QTY HKILTGRR  + TLR+ DGISG+  RSESEYD F   H   S+SA
Sbjct: 81  PDDRIVWDVGHQTYPHKILTGRRDGMKTLRQFDGISGFPRRSESEYDTFGTAHSSTSISA 140

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPK 259
            LGMA+   + G     + VI +G   AG A+EAM+NAG   D+ ++VILND+  S+ P 
Sbjct: 141 ALGMAIGSKLNGDDRFSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDNDMSISP- 199

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                   + AL+  L+R+ S + +   R   + +   +   + E A K++E+A+GM+ P
Sbjct: 200 -------PVGALNRHLARLMSGRFYAAARAGVERVLS-VAPPVLELARKLEEHAKGMVVP 251

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             +TLFEE G  YIGP+DGH+++ LI  LQ +  L   GP  +HVVT   ++ +  + +E
Sbjct: 252 --ATLFEEFGFNYIGPIDGHDLDSLIPTLQNIKEL--RGPQFLHVVT---KKGQGYKLAE 304

Query: 380 AIEKQQEGASDSNSLPFGNYS-----RTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
           A      G    N       S     +TY   F E L   AE D  +V +   M     +
Sbjct: 305 ADPVLYHGPGKFNPAEGIKPSTTPAKKTYTQVFGEWLCDAAELDARVVGITPAMREGSGM 364

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F+++FPERY+DVG+AEQHAVTF+ GLA  GLKP   I S FLQRAYDQ+++DV  Q L
Sbjct: 365 VEFEKRFPERYYDVGIAEQHAVTFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNL 424

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PV F I  AGLVG+DG T  GA+D+ F+ C+PNM VMA SDE+E   M+ T A     P 
Sbjct: 425 PVVFAIDRAGLVGADGATHAGAYDLAFLRCIPNMTVMAASDENECRQMLHT-ALQQPNPT 483

Query: 555 CFRYPRGAIVR-TDLPGYRGIPIEIGKGKVL-----VEGKDVALLGYGAMVQNCLKARAL 608
             RYPRGA      +  +  IP  +GKG+V       +GK +A+L +G MV     A +L
Sbjct: 484 AVRYPRGAGTGVATVKAFTEIP--LGKGEVRRRTSQPDGKRIAILAFGTMV-----APSL 536

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLL 667
            +   +D TVA+ RF KP+D +LV+ L + H +L+TVEEG + GG GS       ++ ++
Sbjct: 537 AAADALDATVANMRFVKPIDAELVQALARTHDYLVTVEEGCVMGGAGS-----ACVEAMM 591

Query: 668 DSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAAT 705
           +SGV  RP++   LPD +++H  P + L+L GL G  IA +
Sbjct: 592 ESGV-VRPVLQLGLPDRFVDHGDPAKLLSLCGLDGDGIAKS 631


>gi|333901951|ref|YP_004475824.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fulva 12-X]
 gi|333117216|gb|AEF23730.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fulva 12-X]
          Length = 628

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 268/629 (42%), Positives = 369/629 (58%), Gaps = 40/629 (6%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD    P  L+ L   EL+ LA E+R  L   V +T     + L  +ELTVALH+VF
Sbjct: 15  TPLLDRANTPDELRRLGEAELETLADELRQYLLYTVGQTGGHFGAGLGVIELTVALHYVF 74

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGRR  + +LR+KDGI+ +  RSESEYD F  GH   S+
Sbjct: 75  DTPEDRLVWDVGHQAYPHKILTGRRERMGSLRQKDGIAAFPRRSESEYDTFGVGHSSTSI 134

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LGMA+A   +G +   V VI +G   AG A+EA+++A  + +NM+V+LND+  S+  
Sbjct: 135 SAALGMAIAAQRQGSKRKSVAVIGDGALTAGMAFEALNHAADVKANMLVVLNDNDMSI-- 192

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                   ++  LS+ L++I SS+++  +RE +K +  ++  G  E A K +E+A+GM+ 
Sbjct: 193 ------SKNVGGLSNYLAKILSSRTYANVREGSKKVLSKL-PGAWEIARKTEEHAKGML- 244

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---RAE-D 374
               T+FEELG  YIGP+DGH++  L++ L+ +  L   G   +HVVT++ +    AE D
Sbjct: 245 -VSGTMFEELGWNYIGPIDGHDLPTLLATLRNMRDL--EGLQFLHVVTKKGKGFAPAEVD 301

Query: 375 TQKSEAIEKQQE-GASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
                AI K +   A      P G     Y   F + L   A  D+ ++ +   M+    
Sbjct: 302 PIVYHAITKLEPINAPAKVKAPSGP---KYSSVFGQWLCEMAAHDERLMAITPAMKEGSD 358

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L  F E  P+RYFDV +AEQHAVT +AG+AC G KP   I S FLQRAYDQ+++DV  Q 
Sbjct: 359 LVAFSEHHPDRYFDVAIAEQHAVTLAAGMACEGAKPVVAIYSTFLQRAYDQLIHDVAVQN 418

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           L V F I  AGLVG DGPT  G+FD++++ C+P M++M PSDE+EL  M+ T       P
Sbjct: 419 LDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLIMTPSDENELHHMLTTGYQFTG-P 477

Query: 554 VCFRYPRGAIVRTDLPGYRGI-PIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
              RYPRG+    + P  R + P+ IGKG V  +GK VALL +G  +   L+    L   
Sbjct: 478 AAVRYPRGS--GPNAPIDRELSPLPIGKGVVRRQGKGVALLVFGVQLAEALRVGGTL--- 532

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGV 671
             D TV D RF KPLD  LV EL  +H  L+T+EE S+ GG GS VS F+A  G L    
Sbjct: 533 --DATVVDMRFVKPLDEALVSELAASHDLLVTIEENSVMGGAGSAVSEFLASQGTL---- 586

Query: 672 KWRPIV---LPDNYIEHASPTQQLALAGL 697
             +P++   LPD Y+EHA P Q LA  GL
Sbjct: 587 --KPMLHLGLPDYYVEHARPDQMLAECGL 613


>gi|16273346|ref|NP_439591.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae Rd
           KW20]
 gi|145629448|ref|ZP_01785246.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           22.1-21]
 gi|260580725|ref|ZP_05848551.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           RdAW]
 gi|1175801|sp|P45205.1|DXS_HAEIN RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|1574278|gb|AAC23088.1| 1-deoxyxylulose-5-phosphate synthase (dxs) {Escherichia coli)
           [Haemophilus influenzae Rd KW20]
 gi|144978291|gb|EDJ88055.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           22.1-21]
 gi|260092542|gb|EEW76479.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           RdAW]
          Length = 625

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 260/639 (40%), Positives = 375/639 (58%), Gaps = 32/639 (5%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+L L+ +P  L+ L   +L QL  E+R+ L   VS+T   L S L  VELTVALH+V+ 
Sbjct: 9   PLLSLINSPEDLRLLNKDQLPQLCQELRAYLLESVSQTSGHLASGLGTVELTVALHYVYK 68

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG Q Y HKILTGRR  + T+R+KDGI  +  R ESE+D  + GH   S+S
Sbjct: 69  TPFDQLIWDVGHQAYPHKILTGRREQMSTIRQKDGIHPFPWREESEFDVLSVGHSSTSIS 128

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           AGLG+AVA + +      V VI +G   AG A+EA+++AG L ++M+VILND+  S+   
Sbjct: 129 AGLGIAVAAERENAGRKTVCVIGDGAITAGMAFEALNHAGALHTDMLVILNDNEMSI--- 185

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                  ++ AL++ L+RI S   +  LR+ +K +  ++   +  +  K +E+ +G++  
Sbjct: 186 -----SENVGALNNHLARIFSGSLYSTLRDGSKKILDKV-PPIKNFMKKTEEHMKGVMFS 239

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             STLFEELG  YIGPVDGHNI++L++ L  + +L   GP  +H+ T++ +     +K  
Sbjct: 240 PESTLFEELGFNYIGPVDGHNIDELVATLTNMRNL--KGPQFLHIKTKKGKGYAPAEKDP 297

Query: 380 -AIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQ 438
                  +    S  LP  N   TY   F + L   AEKD  I+ +   M     +  F 
Sbjct: 298 IGFHGVPKFDPISGELPKNNSKPTYSKIFGDWLCEMAEKDAKIIGITPAMREGSGMVEFS 357

Query: 439 EKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRF 498
           ++FP++YFDV +AEQHAVTF+ GLA GG KP   I S FLQRAYDQ+++DV  Q LPV F
Sbjct: 358 QRFPKQYFDVAIAEQHAVTFATGLAIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPVLF 417

Query: 499 VITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRY 558
            I  AG+VG+DG T  GAFDI+FM C+PNMI+M PSDE+E   M+ T      +P   RY
Sbjct: 418 AIDRAGIVGADGATHQGAFDISFMRCIPNMIIMTPSDENECRQMLYTGYQC-GKPAAVRY 476

Query: 559 PRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTV 618
           PRG  V   L     +P  IGK +++ +G+ +A+L +G ++ + L+   L  KL  + TV
Sbjct: 477 PRGNAVGVKLTPLEMLP--IGKSRLIRKGQKIAILNFGTLLPSALE---LSEKL--NATV 529

Query: 619 ADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG----LLDSGVKW 673
            D RF KP+DI+++  L Q H +L+T+EE +I GG GS V+  +   G    LL  G   
Sbjct: 530 VDMRFVKPIDIEMINVLAQTHDYLVTLEENAIQGGAGSAVAEVLNSSGKSTALLQLG--- 586

Query: 674 RPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
               LPD +I  A+  + LA  GL    I    L+ + +
Sbjct: 587 ----LPDYFIPQATQQEALADLGLDTKGIEEKILNFIAK 621


>gi|407473844|ref|YP_006788244.1| 1-deoxy-D-xylulose-5-phosphate synthase [Clostridium acidurici 9a]
 gi|407050352|gb|AFS78397.1| 1-deoxy-D-xylulose-5-phosphate synthase Dxs [Clostridium acidurici
           9a]
          Length = 626

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 246/608 (40%), Positives = 375/608 (61%), Gaps = 35/608 (5%)

Query: 91  LKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDKILWDVG 150
           LK + I+EL   A EIR  +   VS     L S+L  VELT+ALH +F+   DKI+WDVG
Sbjct: 17  LKKMDIEELNLFAKEIRQLIIETVSNNGGHLSSNLGVVELTLALHKIFNTERDKIIWDVG 76

Query: 151 EQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDI 210
            Q+Y HKILTGR+   HTLRK  GISG+  R ES +D F+ GH   S+SAGLG A++RDI
Sbjct: 77  HQSYTHKILTGRKDDFHTLRKYKGISGFPKRKESIHDAFDTGHSSTSISAGLGYALSRDI 136

Query: 211 KGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKIEESPKTSINA 270
           K +   +V+VI +G   AG A+EA+++AG + S++IV+LND+        E S   ++  
Sbjct: 137 KKEDYSVVSVIGDGAMTAGMAFEALNHAGDIKSDLIVVLNDN--------EMSISENVGG 188

Query: 271 LSSTLSRIQSSKSFRQLREVAKGMTKR---IGRGMHEWAAKVDEYARGMIGPQGSTLFEE 327
           LS  L  ++++ ++ +++E  + +      IG+ + + A +  +  +  + P     FE+
Sbjct: 189 LSRYLEGLRTTPTYFKVKEDVEYILNSIPAIGKRVLKTAGRAKDSVKYFLVP--GMFFED 246

Query: 328 LGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSEAIEKQQEG 387
           +G  Y GP+DGHNI ++++VL+    +G  GPVLVHVVT++ +  +  +K   I     G
Sbjct: 247 IGFKYFGPIDGHNISEIMNVLKMAKKVG--GPVLVHVVTKKGKGYKPAEKHPDI---FHG 301

Query: 388 ASDSNSLPFG-----NYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFP 442
           AS S  +  G     N   TY D     LV  AEKD++IV + A M     L  F+E F 
Sbjct: 302 AS-SFDIETGESLKKNSKETYSDVLGNTLVELAEKDENIVAITAAMPSGTGLDSFRENFK 360

Query: 443 ERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITS 502
           +R+FDVG+AEQH VTF+AGLA  G+KPF  + S FLQR YDQ+++DV  Q+LPV F+I  
Sbjct: 361 DRFFDVGIAEQHGVTFAAGLAANGMKPFFAVYSTFLQRGYDQIIHDVCIQKLPVTFIIDR 420

Query: 503 AGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYPRGA 562
           AGLVG DG T  G FD++++S +PN+I+MAP D+ E ++M+   + + + P   R+PRGA
Sbjct: 421 AGLVGDDGETHHGVFDLSYLSHMPNLIIMAPKDKSEFIEMIKFSSKL-ELPSAIRFPRGA 479

Query: 563 IVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADAR 622
            +  +    + +PIE+GK +V+  G+ +AL+  G MV+   KA   L ++G ++T+ + R
Sbjct: 480 CI--NFIEEKCLPIEVGKSEVINHGEKIALISLGKMVEVSYKAIMELKEIGKNITLINGR 537

Query: 623 FCKPLDIKLVRELCQNHTFLITVEEGS-IGGFGSHVSHFIALDGLLDSGVKWR--PIVLP 679
           F KPLD KL+ ++ ++H  +IT+E+ + IGGFGS +++      L+ +  K +   I +P
Sbjct: 538 FVKPLDEKLILDVAKSHQVIITLEDNAKIGGFGSLINNL-----LIKNNFKGKVINISIP 592

Query: 680 DNYIEHAS 687
           D ++EH S
Sbjct: 593 DEFVEHGS 600


>gi|409407600|ref|ZP_11256051.1| 1-deoxy-D-xylulose 5-phosphate synthase [Herbaspirillum sp. GW103]
 gi|386433351|gb|EIJ46177.1| 1-deoxy-D-xylulose 5-phosphate synthase [Herbaspirillum sp. GW103]
          Length = 621

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 266/655 (40%), Positives = 389/655 (59%), Gaps = 54/655 (8%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L  + +P  L+ L+  +LK LA E+R  L   VSKT   L S+L  VELT+ALH+VF+ 
Sbjct: 2   LLTTINDPADLRRLSRPQLKPLAEELRGFLLDSVSKTGGHLSSNLGTVELTIALHYVFNT 61

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+I+WDVG QTY HKILTGRR  + TLR+++GISG+  R ES+YD F   H   S+SA
Sbjct: 62  PEDRIVWDVGHQTYPHKILTGRRDRMDTLRQQEGISGFPRRIESQYDTFGTAHSSTSISA 121

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAG-YLDSNMIVILNDSRHSLHPK 259
            LGMA+A   +G     + VI +G   AG A+EA++NAG + D N++VILND+  S+ P 
Sbjct: 122 ALGMALAARTQGSDRHAIAVIGDGAMTAGMAFEALNNAGVHEDINLLVILNDNDMSISP- 180

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                   + AL+  L+R+ S K + + R+V K +   +   + E A +++E+A+GM+ P
Sbjct: 181 -------PVGALNRYLARLMSGKFYAKARDVGKSV---LPGPVLELAKRLEEHAKGMVVP 230

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             +T+FEE G  YIGP+DGH+++ LI  LQ +  L   GP  +HVVT   ++ +  + +E
Sbjct: 231 --ATMFEEFGFNYIGPIDGHDLDSLIPTLQNLKQL--KGPQFLHVVT---KKGQGYKLAE 283

Query: 380 AIEKQQEGASDSNS----LPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQ 435
           A      G    N      P      TY   F + L   A  D+ +V +   M     + 
Sbjct: 284 ADPVLYHGPGKFNPSEGIKPSAGGKLTYTQVFGQWLCDMAAADEKLVGITPAMREGSGMV 343

Query: 436 LFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLP 495
            F++ FP+RY+DVG+AEQHAVTF+AG+AC G+KP   I S FLQRAYDQ+++DV  Q L 
Sbjct: 344 GFEKTFPKRYYDVGIAEQHAVTFAAGMACEGMKPVVAIYSTFLQRAYDQLIHDVALQNLD 403

Query: 496 VRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVC 555
           V F +  AGLVG+DG T  G +D+ F+ C+PNM+VMA SDE+E   M++T       P  
Sbjct: 404 VTFALDRAGLVGADGATHAGNYDLAFLRCIPNMVVMAASDENECRKMLSTAYQYPG-PAA 462

Query: 556 FRYPRGAIVRTDLPGYRGIPIE-------IGKGKVLVEGKDVALLGYGAMVQNCLKARAL 608
            RYPRGA V        G  +E       +G+G++  +G+DVA+L +G+++     A AL
Sbjct: 463 VRYPRGAGV--------GAAVEKTLETLPLGRGEIRRQGRDVAILAFGSLL-----APAL 509

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLL 667
            +   ++ TVA+ RF KPLD++LV++L  +H  L+TVEEG I GG G+ VS  +A  G+ 
Sbjct: 510 SAGDKLNATVANMRFIKPLDVELVKQLAASHDALVTVEEGCIMGGAGAAVSEALAAAGI- 568

Query: 668 DSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLL 719
                 +P++   LPD +I+H    Q LA  GL    IA + +   G+ +  L++
Sbjct: 569 -----NKPVLHLGLPDRFIDHGDAAQLLAQCGLDADGIAQSIVQRFGKDQTRLVV 618


>gi|325983214|ref|YP_004295616.1| deoxyxylulose-5-phosphate synthase [Nitrosomonas sp. AL212]
 gi|325532733|gb|ADZ27454.1| deoxyxylulose-5-phosphate synthase [Nitrosomonas sp. AL212]
          Length = 614

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 263/643 (40%), Positives = 375/643 (58%), Gaps = 45/643 (6%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+LD +  P +L+ L  K+L Q A E+RS L   V+KT   L S+L  VELT+ALH+VF+
Sbjct: 3   PLLDTINLPFQLRELDQKKLPQFAKELRSFLIDSVAKTGGHLSSNLGTVELTIALHYVFN 62

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG QTYAHKILTGRR+ ++ LR +DG++G+  R ESEYD F   H   S+S
Sbjct: 63  TPHDQLVWDVGHQTYAHKILTGRRNGMNKLRMQDGLAGFPRRDESEYDAFGTAHSSTSIS 122

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           A LGMAVA  +       + +I +G   AG A+EA++NAG +D+N++VILND+  S+   
Sbjct: 123 AALGMAVAAQLNRTDRRAIAIIGDGAMSAGMAFEALNNAGVMDANLLVILNDNDMSI--- 179

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                   + AL++ L+++ S + +   R   + +   +   + E A + +E+ +GM+ P
Sbjct: 180 -----SRPVGALNNYLAKLMSGRFYATARRAGEKVLGVVPTVL-ELAKRAEEHVKGMVTP 233

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
              TLFEE G  YIGP+DGH+++ L++ L  +  L   GP  +HVVT +        + +
Sbjct: 234 --GTLFEEFGFNYIGPIDGHDLDVLVTTLGNIKQL--EGPQFLHVVTRKG-AGYKVAEED 288

Query: 380 AIEKQQEGASDSNS--LPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLF 437
            I     G  D     +   N   TY   F + L   A +D  ++ V   M     L  F
Sbjct: 289 PILYHGVGKFDPKKGIVTKSNGKPTYTQIFGDWLCDMAAQDSRLIGVTPAMREGSGLVRF 348

Query: 438 QEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVR 497
            E++PERYFDVG+AEQHAVTF+AG AC GLKP   I S FLQRAYDQ+++DV  Q LPV 
Sbjct: 349 SEEYPERYFDVGIAEQHAVTFAAGAACDGLKPVVAIYSTFLQRAYDQLIHDVAIQNLPVV 408

Query: 498 FVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFR 557
           F I  AGLVG+DGPT  G+FD+T++ C+PNM VMAP+DE+E   M+ T   + D P   R
Sbjct: 409 FAIDRAGLVGADGPTHAGSFDLTYLRCIPNMTVMAPADENECRQMLYTAFKL-DTPTAVR 467

Query: 558 YPRGA----IVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
           YPRG      V+ ++   + +P  +G+G++  +GK +ALL +G+M+  CL A   L    
Sbjct: 468 YPRGTGPGIQVQKEM---QALP--VGRGEIRRQGKKIALLAFGSMLAPCLAAGDEL---- 518

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHV-----SHFIALDGLL 667
            + TV + RF KPLD  L+  L  +H  L+TVEE ++ GG GS V     S  I + G+L
Sbjct: 519 -NATVVNMRFIKPLDDDLLASLTADHNLLVTVEENTVMGGAGSAVIESLNSQRIQV-GVL 576

Query: 668 DSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
             G       LPD +IE     Q LA  GL    I  +  ++L
Sbjct: 577 QLG-------LPDIFIEQGDHAQMLANCGLDSSGIIKSVRAVL 612


>gi|428773332|ref|YP_007165120.1| 1-deoxy-D-xylulose-5-phosphate synthase [Cyanobacterium stanieri
           PCC 7202]
 gi|428687611|gb|AFZ47471.1| 1-deoxy-D-xylulose-5-phosphate synthase [Cyanobacterium stanieri
           PCC 7202]
          Length = 639

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 253/636 (39%), Positives = 373/636 (58%), Gaps = 31/636 (4%)

Query: 87  NPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDKIL 146
           +P +L  L+I++L+ +A +IR +    ++ T   L   L  VELT+AL++      DK++
Sbjct: 8   HPNQLHGLSIRQLEDIAQQIREKHLETIAATGGHLGPGLGVVELTIALYNTLDLEQDKVI 67

Query: 147 WDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAV 206
           WDVG Q Y HK+LTGR    HTLR+KDGI+GY  RSE+++D F AGH   S+SAGLGMA+
Sbjct: 68  WDVGHQAYPHKMLTGRYHDFHTLRQKDGIAGYLKRSENKFDHFGAGHASTSISAGLGMAL 127

Query: 207 ARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPKIEESPK 265
           ARD KG+   +V+VI +G    G A EA+++AG+L ++N++V+LND+  S+ P       
Sbjct: 128 ARDAKGENFKVVSVIGDGALTGGMALEAINHAGHLPNTNLMVVLNDNEMSISP------- 180

Query: 266 TSINALSSTLSRIQSSKSFRQLREVAKGMTKRI-----GRGMHEWAAKVDEYARGMIGPQ 320
            ++ A+S  L++++ S   + L    +   K       G  +      + E  + +  P+
Sbjct: 181 -NVGAISRYLNKVRLSDPIQFLTGNIEEQFKHFPFFGDGENLSPEMRNLKEAMKRLAMPK 239

Query: 321 GSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSEA 380
              + EELG  Y GPVDGHNI++LI+  Q+   +   GPV VHVVT + +     +K + 
Sbjct: 240 VGAVIEELGFTYFGPVDGHNIDELINTFQKAHKV--KGPVFVHVVTVKGKGYSMAEKDQV 297

Query: 381 IEKQQEGASDSNSLPF-GNYSR--TYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLF 437
               Q   + +   P   N  +  +Y   F   L   AE D  I+ + A M     L   
Sbjct: 298 GYHAQSPFNLTTGKPIPSNKPKPPSYSKVFAHTLTTLAENDPKIIGITAAMATGTGLDKL 357

Query: 438 QEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVR 497
           Q+K P++Y DVG+AEQHAVT +AGLAC G+ P   I S FLQRAYDQ+++DV  Q++PV 
Sbjct: 358 QQKLPKQYIDVGIAEQHAVTLAAGLACEGMTPVAAIYSTFLQRAYDQIIHDVCIQKIPVF 417

Query: 498 FVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFR 557
           F +  AG+VG+DGPT  G +DI ++ C+PN+++MAP DE EL  M  T     +  +  R
Sbjct: 418 FCLDRAGIVGADGPTHQGMYDIAYLRCIPNLVIMAPKDEAELQRMTVTGIKHKESAIAMR 477

Query: 558 YPRGAIVRTDLP--GYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGID 615
           YPRG  +   L   G+  IP  IGKG++L  G DV L+GYG+MV N ++   +LS+ G++
Sbjct: 478 YPRGNGLGVPLAEEGWEEIP--IGKGEILRNGDDVLLVGYGSMVNNAMQTAEILSEHGVE 535

Query: 616 VTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVK-- 672
            TV +ARF KPLD +L+  L +    ++T+EEG I GGFGS V+     + L+D  V   
Sbjct: 536 ATVINARFVKPLDTELIVPLAEKIGKVVTLEEGCIMGGFGSAVA-----EALIDHNVNVP 590

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALS 708
            + I +PD  ++HA+P Q  A  GLT   IA   L+
Sbjct: 591 VKRIGVPDILVDHATPAQSFADLGLTSPQIAERVLN 626


>gi|20807747|ref|NP_622918.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thermoanaerobacter
           tengcongensis MB4]
 gi|22095585|sp|Q8RAC5.1|DXS_THETN RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|20516301|gb|AAM24522.1| Deoxyxylulose-5-phosphate synthase [Thermoanaerobacter
           tengcongensis MB4]
          Length = 622

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 258/643 (40%), Positives = 378/643 (58%), Gaps = 32/643 (4%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L+ + +P  LK L IK+L +L+ EIR  +   VSKT   L S+L  VELT+ALH+VF++
Sbjct: 1   MLEQINSPYDLKKLDIKDLPRLSEEIRQFIVEKVSKTGGHLASNLGIVELTLALHYVFNS 60

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           PVDKI+WDVG Q Y HK++TGRR    TLR+ +G+SGYT R+ES +D F AGH   S+SA
Sbjct: 61  PVDKIIWDVGHQCYVHKMITGRRDKFDTLRQFNGLSGYTKRTESIHDIFGAGHSSTSLSA 120

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKI 260
            LG+A ARD+KG++  ++ VI +G    G A EA++N G    ++IVILN +        
Sbjct: 121 ALGIATARDLKGEKYHVIAVIGDGALTGGMALEALNNIGRSRKDVIVILNHN-------- 172

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTK---RIGRGMHEWAAKVDEYARGMI 317
           E S   ++ +LS  LS++++  ++ ++++    +      IG+ +H++  K+ +  + ++
Sbjct: 173 EMSISENVGSLSLYLSKLRTDPTYNKVKQEIDNLLNIIPPIGKSLHKYIEKIKDSIKQLV 232

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQK 377
            P     FEELG  Y+GP+DGHN+E+LI VL+    +   GP+L+HVVT++ +     +K
Sbjct: 233 VP--GMFFEELGFTYLGPIDGHNVEELIEVLERSKKM--KGPLLIHVVTKKGKGYMFAEK 288

Query: 378 SEAIEKQQEGAS-DSNSLPF-GNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQ 435
               +K    A  D  +  F G    +Y D F + L   A KD+ IV + A M     L 
Sbjct: 289 RP--DKFHSAAPFDIETGKFVGEGKDSYSDVFGKTLAEMALKDEKIVAITAAMPEGTGLI 346

Query: 436 LFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLP 495
            F +  P+R+FDVG+AEQHA TF+AGLA  G KP+  + S FLQRAYDQV++DV  Q+LP
Sbjct: 347 HFAKLIPDRFFDVGIAEQHATTFAAGLAVEGYKPYFAVYSTFLQRAYDQVIHDVCIQKLP 406

Query: 496 VRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVC 555
           V F +  AG+VG DG T  G FDI+F+  +PN+ +M+P D +ELV+MV    ++ D PV 
Sbjct: 407 VVFAVDRAGIVGEDGETHQGVFDISFLRAIPNIAIMSPKDANELVEMVKLSRNL-DFPVA 465

Query: 556 FRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGID 615
            RYPRG     D+      P  +GKG+VL+EG+ +A+   G MV   + A  +L   GI+
Sbjct: 466 IRYPRGKAGEYDISRKPSFP--LGKGEVLLEGEKIAVFALGRMVSKSIDAAEILKGHGIN 523

Query: 616 VTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVKWR 674
             V + RF KPLD +L+ E+      ++TVE+  I GG GS      A+  LL+    +R
Sbjct: 524 PFVVNLRFVKPLDEELILEISNKVDLVVTVEDNVIAGGVGS------AILELLNDKKVYR 577

Query: 675 PIV---LPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTR 714
           P++    PD +IEH          GL    IA T L      R
Sbjct: 578 PVLRLGFPDKFIEHGDVESLFKKYGLDSQSIADTILQRYKEMR 620


>gi|422336037|ref|ZP_16417010.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           aphrophilus F0387]
 gi|353346223|gb|EHB90508.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           aphrophilus F0387]
          Length = 619

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 247/616 (40%), Positives = 368/616 (59%), Gaps = 25/616 (4%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+L L+ +P  L+ L  ++L Q+  E+R  L   VS++   L S L  VELTVALH+VF 
Sbjct: 5   PLLSLINSPEDLRLLPKEQLTQVCKELREYLLESVSQSSGHLASGLGTVELTVALHYVFK 64

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG Q Y HKILTGRR  + T+R+K G+  +  R ESE+D  + GH   S+S
Sbjct: 65  TPFDQLIWDVGHQAYPHKILTGRRDQMPTIRQKGGLHPFPWRDESEFDVLSVGHSSTSIS 124

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           AGLG+A+A + +      V VI +G   AG A+EA+++AG L ++M+VILND+  S+   
Sbjct: 125 AGLGIAIAAERENAGRKTVCVIGDGAITAGMAFEALNHAGSLHTDMLVILNDNEMSI--- 181

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                  ++ AL++ L+R+ S   +  +RE  K +   +   + E+  K +E+ +G++ P
Sbjct: 182 -----SENVGALNNHLARLLSGSFYSSIREGGKKILSGV-PPIKEFVKKTEEHVKGLVSP 235

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
            G T+FEELG  YIGP+DGHN+E+LI+ LQ ++SL   GP  +H+VT++ +     +K  
Sbjct: 236 -GGTMFEELGFNYIGPIDGHNVEELINTLQNMSSL--KGPQFLHIVTKKGKGYIPAEKDP 292

Query: 380 -AIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQ 438
                  +    S  LP  N + TY   F + L   AE+D  ++ +   M     +  F 
Sbjct: 293 IGFHGVPKFNHLSGELPKSNATPTYSKIFGDWLCEIAEQDPKLIGITPAMREGSGMVEFS 352

Query: 439 EKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRF 498
           ++FP++YFDV +AEQHAVTF+AGLA GG KP   I S FLQRAYDQ+++DV  Q LPV F
Sbjct: 353 QRFPQQYFDVAIAEQHAVTFAAGLAIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPVLF 412

Query: 499 VITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRY 558
            I  AG+VG+DG T  GAFD++FM C+PN+++MAPSDE+E   M+ T      +P   RY
Sbjct: 413 AIDRAGIVGADGQTHQGAFDLSFMRCIPNLVIMAPSDENECRQMLYTGYHC-GKPAAVRY 471

Query: 559 PRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTV 618
           PRG  V   L       +E+GK K++ EGK +A+L +G ++ N LK    L     + TV
Sbjct: 472 PRGNAVGVTLEPLHA--LELGKSKLIREGKKIAILNFGTLLPNALKVAEKL-----NATV 524

Query: 619 ADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVKWRPIV 677
            D RF KP+D+  + E+ + H  ++T+EE +I GG GS V+  + +       VK   + 
Sbjct: 525 VDMRFIKPIDVTRISEIAKTHELIVTLEENAIQGGAGSAVAEVLHVQ---QHNVKLLQLG 581

Query: 678 LPDNYIEHASPTQQLA 693
           +PD ++   S  + LA
Sbjct: 582 IPDFFVPPGSQAEMLA 597


>gi|374669416|gb|AEZ55866.1| chloroplast 1-deoxy-D-xylulose 5-phosphate synthase 2 [Mitragyna
           speciosa]
          Length = 492

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 219/419 (52%), Positives = 293/419 (69%), Gaps = 9/419 (2%)

Query: 71  DFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVEL 130
           +F  +K PTPILD +  P+ +K+L+ +EL++LA E+R E+   VSKT + L +SL   EL
Sbjct: 77  NFTGEKPPTPILDTINYPIHMKNLSFEELERLADELREEIVYTVSKTGEHLSASLGVAEL 136

Query: 131 TVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFN 190
           TVALHHVF+ P DKI+WDVG QTY HKILTGRRS +HT+R+  G++G+  R ES +D F 
Sbjct: 137 TVALHHVFNTPDDKIIWDVGHQTYPHKILTGRRSRMHTIRQTCGLAGFPKRDESVHDAFG 196

Query: 191 AGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
           AGH   S+SAGLGMAV RD+ GK   +++VI +G   AGQAYEAM+NAG+LDSN+I++LN
Sbjct: 197 AGHSSTSISAGLGMAVGRDLLGKANHVISVIGDGAMTAGQAYEAMNNAGFLDSNLIIVLN 256

Query: 251 DSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKV 309
           D++  SL     + P   + ALS  L+++QSS+  RQLRE AKG+TK++G   HE AAKV
Sbjct: 257 DNKQVSLPTATLDGPAAPVGALSKALTKMQSSRKLRQLREAAKGVTKQLGNQAHEIAAKV 316

Query: 310 DEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN 369
           D Y RG++   G++LFEELGLYYIGPVDGHNIEDL+ + ++V S+ + GPVL+H++TE  
Sbjct: 317 DSYVRGVVNGSGASLFEELGLYYIGPVDGHNIEDLVYIFKKVKSMPAPGPVLIHIMTE-- 374

Query: 370 RRAEDTQKSEAIEKQQEGA-----SDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVV 424
            + +    +EA   +  G           L   + ++TY   F E+L  EAE+D  IV +
Sbjct: 375 -KGKGYPPAEAASDKMHGVVKFDPQTGKQLKSSSKTKTYTTYFAESLAAEAEQDDKIVAI 433

Query: 425 HAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYD 483
           HA M     L +FQ++FP R FDVG+AEQHAVTF+AGLA  GLKPFC I S+FLQR YD
Sbjct: 434 HAAMGGGTGLNIFQKRFPHRCFDVGIAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGYD 492


>gi|251792483|ref|YP_003007209.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           aphrophilus NJ8700]
 gi|247533876|gb|ACS97122.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           aphrophilus NJ8700]
          Length = 619

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 247/616 (40%), Positives = 368/616 (59%), Gaps = 25/616 (4%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+L L+ +P  L+ L  ++L Q+  E+R  L   VS++   L S L  VELTVALH+VF 
Sbjct: 5   PLLSLINSPEDLRLLPKEQLTQVCKELREYLLESVSQSSGHLASGLGTVELTVALHYVFK 64

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG Q Y HKILTGRR  + T+R+K G+  +  R ESE+D  + GH   S+S
Sbjct: 65  TPFDQLIWDVGHQAYPHKILTGRRDQMPTIRQKGGLHPFPWRDESEFDVLSVGHSSTSIS 124

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           AGLG+A+A + +      V VI +G   AG A+EA+++AG L ++M+VILND+  S+   
Sbjct: 125 AGLGIAIAAERENAGRKTVCVIGDGAITAGMAFEALNHAGSLHTDMLVILNDNEMSI--- 181

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                  ++ AL++ L+R+ S   +  +RE  K +   +   + E+  K +E+ +G++ P
Sbjct: 182 -----SENVGALNNHLARLLSGSFYSSIREGGKKILSGV-PPIKEFVKKTEEHVKGLVSP 235

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
            G T+FEELG  YIGP+DGHN+E+LI+ LQ ++SL   GP  +H+VT++ +     +K  
Sbjct: 236 -GGTMFEELGFNYIGPIDGHNVEELINTLQNMSSL--KGPQFLHIVTKKGKGYIPAEKDP 292

Query: 380 -AIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQ 438
                  +    S  LP  N + TY   F + L   AE+D  ++ +   M     +  F 
Sbjct: 293 IGFHGVPKFNHLSGELPKSNATPTYSKIFGDWLCEIAEQDPKLIGITPAMREGSGMVEFS 352

Query: 439 EKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRF 498
           ++FP++YFDV +AEQHAVTF+AGLA GG KP   I S FLQRAYDQ+++DV  Q LPV F
Sbjct: 353 QRFPQQYFDVAIAEQHAVTFAAGLAIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPVLF 412

Query: 499 VITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRY 558
            I  AG+VG+DG T  GAFD++FM C+PN+++MAPSDE+E   M+ T      +P   RY
Sbjct: 413 AIDRAGIVGADGQTHQGAFDLSFMRCIPNLVIMAPSDENECRQMLYTGYHC-GKPAAVRY 471

Query: 559 PRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTV 618
           PRG  V   L       +E+GK K++ EGK +A+L +G ++ N LK    L     + TV
Sbjct: 472 PRGNAVGVTLEPLHA--LELGKSKLIREGKKIAILNFGTLLPNALKVAEKL-----NATV 524

Query: 619 ADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVKWRPIV 677
            D RF KP+D+  + E+ + H  ++T+EE +I GG GS V+  + +       VK   + 
Sbjct: 525 VDMRFIKPIDVTRISEITKTHELIVTLEENAIQGGAGSAVAEVLHVQ---QHNVKLLQLG 581

Query: 678 LPDNYIEHASPTQQLA 693
           +PD ++   S  + LA
Sbjct: 582 IPDFFVPPGSQAEMLA 597


>gi|257464787|ref|ZP_05629158.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus minor 202]
 gi|257450447|gb|EEV24490.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus minor 202]
          Length = 617

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 252/636 (39%), Positives = 377/636 (59%), Gaps = 30/636 (4%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+L  + +P  L+ L  ++L+ LA E+R+ L   VS++   L S L  VELTVALH+V+ 
Sbjct: 6   PLLSKINSPEDLRLLNKEQLQPLADELRAYLLECVSQSSGHLASGLGVVELTVALHYVYQ 65

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG Q Y HKILTGRR  I T+R+KDGI  +  R ES YD  + GH   S+S
Sbjct: 66  TPFDQLIWDVGHQAYPHKILTGRRDQIKTIRQKDGIHPFPWREESVYDVLSVGHSSTSIS 125

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           AGLG+AVA + +      V VI +G   AG A+EA+++AG L ++M+VILND+  S+   
Sbjct: 126 AGLGIAVAAEKENAGRKTVCVIGDGAITAGMAFEALNHAGALHTDMLVILNDNEMSI--- 182

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                  ++ AL++ L++I S   +  +R+ +K +  ++   +  +  K +E+ +G+I  
Sbjct: 183 -----SENVGALNNHLAQIFSGSLYTTVRDGSKKILDKVPT-IKNFMKKSEEHMKGVIFS 236

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             STLFEELG  YIGPVDGHNIE+L+  L  +  L   GP  +H+ T++ +     +   
Sbjct: 237 PESTLFEELGFNYIGPVDGHNIEELVKTLSNMREL--KGPQFLHIRTKKGKGYTPAENDP 294

Query: 380 -AIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQ 438
                  +    S  LP      TY D F   L   A +D  ++ +   M     +  F 
Sbjct: 295 IGFHGVPKFDPASGQLPKAKNVPTYSDIFGNWLCEMAAQDTKLIGITPAMREGSGMVEFS 354

Query: 439 EKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRF 498
           ++FPE+YFDV +AEQHAVTF+AGLA  G KP   I S+FLQRAYDQ+++DV  Q LPV F
Sbjct: 355 KRFPEQYFDVAIAEQHAVTFAAGLAIAGYKPVVAIYSSFLQRAYDQLIHDVAIQNLPVIF 414

Query: 499 VITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRY 558
            I  AG+VG+DG T  GAFD+++M C+PNM +M PSDE+E+  M+ T  ++ + PV  RY
Sbjct: 415 AIDRAGIVGADGQTHQGAFDLSYMRCIPNMTIMTPSDENEMRQMLYTAYTL-NTPVAVRY 473

Query: 559 PRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTV 618
           PRG     +L      P+ IGKG++L EGK VA+L +GA++    +A+ ++ +   D T+
Sbjct: 474 PRGNAQGVELQPMN--PLAIGKGRILREGKKVAILNFGALLN---EAKTVVEQY--DYTL 526

Query: 619 ADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVKWRPIV 677
            D RF KPLD +L+ EL +NH + +T+EE +I GG GS V+ ++   G      K +P++
Sbjct: 527 VDMRFVKPLDERLIAELAENHDYFVTLEENAIQGGAGSAVNEYLQSIG------KIKPLI 580

Query: 678 L---PDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
           +   PD ++  A+  +   + GL    I     ++L
Sbjct: 581 MLGIPDYFVPQATQQEAYEMLGLDAKGIEKKIQAML 616


>gi|445494923|ref|ZP_21461967.1| 1-deoxy-D-xylulose-5-phosphate synthase Dxs [Janthinobacterium sp.
           HH01]
 gi|444791084|gb|ELX12631.1| 1-deoxy-D-xylulose-5-phosphate synthase Dxs [Janthinobacterium sp.
           HH01]
          Length = 623

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 264/636 (41%), Positives = 375/636 (58%), Gaps = 43/636 (6%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L+ +++P  ++ L   +L  LA E+RS L   VSKT   L S+L  VELTVALH+VF+ 
Sbjct: 3   LLENIDSPADVRKLARTQLTPLAHELRSYLLDSVSKTGGHLSSNLGTVELTVALHYVFNT 62

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+I+WDVG QTY+HKILTGRR  +HTLR+ +GISG+  R ESEYD F   H   S+SA
Sbjct: 63  PHDRIVWDVGHQTYSHKILTGRRERMHTLRQLNGISGFPKRDESEYDTFGTAHSSTSISA 122

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPK 259
            LGMA A  IKG+    + VI +G+  AG A+EA++NAG   D N++VILND+  S+ P 
Sbjct: 123 ALGMAQAAKIKGEHRHAIAVIGDGSMTAGMAFEALNNAGVQEDLNLLVILNDNDMSISP- 181

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRG-MHEWAAKVDEYARGMIG 318
                   + AL+  L+R+ S     Q    AK + K +  G + E A +++E+A+GM+ 
Sbjct: 182 -------PVGALNRYLARLMSG----QFYAAAKNVGKSVLPGPVLELAKRLEEHAKGMVV 230

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
           P  +T+FEE G  YIGP+DGH++E L+  LQ +  L   GP  +HVVT   ++ +  + +
Sbjct: 231 P--ATMFEEFGFNYIGPIDGHDLESLVPTLQNIKQL--KGPQFLHVVT---KKGQGYKLA 283

Query: 379 EAIEKQQEGASDSNSL----PFGNYSR-TYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
           EA      G    N      P     + +Y D F   L   A  DK +V +   M     
Sbjct: 284 EAEPVLYHGTPKFNPAEGIKPAAAPGKMSYTDVFGNWLCDMAAADKKLVGITPAMREGSG 343

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           +  F++++P+RYFDVG+AEQHAVTF AGLAC GLKP   I S FLQR YDQ+++DV  Q 
Sbjct: 344 MVRFEQEYPDRYFDVGIAEQHAVTFGAGLACEGLKPVVAIYSTFLQRGYDQLIHDVALQN 403

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           L V F +  AGLVG+DG T  G +D+ ++ C+PNM+VMA SDE+E   M++T       P
Sbjct: 404 LDVTFALDRAGLVGADGATHAGNYDLAYLRCIPNMVVMAASDENECRQMLSTGYHYKG-P 462

Query: 554 VCFRYPR----GAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALL 609
              RYPR    GA ++ +L       IEIGKG++  +G+ +A+L +G+MV     A A  
Sbjct: 463 AAIRYPRGAGAGAAIQPEL-----TTIEIGKGEIKRKGQKIAILAFGSMV-----APATA 512

Query: 610 SKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDS 669
           +   +D TVA+ RF KPLD++LV++L   + +L+TVEEG I G              +  
Sbjct: 513 AGEALDATVANMRFIKPLDVELVKQLAAEYDYLVTVEEGCIMGGAGAAVAEALAAEGIVK 572

Query: 670 GVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAAT 705
            ++   + LPD +I+H  P + LA  GL    I A+
Sbjct: 573 PLQM--LGLPDKFIDHGDPAKLLASVGLDAAGITAS 606


>gi|254478700|ref|ZP_05092071.1| 1-deoxy-D-xylulose-5-phosphate synthase [Carboxydibrachium
           pacificum DSM 12653]
 gi|214035387|gb|EEB76090.1| 1-deoxy-D-xylulose-5-phosphate synthase [Carboxydibrachium
           pacificum DSM 12653]
          Length = 622

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 258/643 (40%), Positives = 377/643 (58%), Gaps = 32/643 (4%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L+ + +P  LK L IK+L +L+ EIR  +   VSKT   L S+L  VELT+ALH+VF++
Sbjct: 1   MLEQINSPYDLKKLDIKDLPRLSEEIRQFIVEKVSKTGGHLASNLGIVELTLALHYVFNS 60

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           PVDKI+WDVG Q Y HK++TGRR    TLR+ +G+SGYT R+ES +D F AGH   S+SA
Sbjct: 61  PVDKIIWDVGHQCYVHKMITGRRDKFDTLRQFNGLSGYTKRTESIHDIFGAGHSSTSLSA 120

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKI 260
            LG+A ARD+KG++  ++ VI +G    G A EA++N G    ++IVILN +        
Sbjct: 121 ALGIATARDLKGEKYHVIAVIGDGALTGGMALEALNNIGRSQKDVIVILNHN-------- 172

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTK---RIGRGMHEWAAKVDEYARGMI 317
           E S   ++ +LS  LS++++  ++ ++++    +      IG+ +H++  K+ +  + ++
Sbjct: 173 EMSISENVGSLSLYLSKLRTDPTYNKVKQEIDNLLNIIPPIGKSLHKYIEKIKDSIKQLV 232

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQK 377
            P     FEELG  Y+GP+DGHN+E+LI VL+    +   GP+L+HVVT++ +     +K
Sbjct: 233 VP--GMFFEELGFTYLGPIDGHNVEELIEVLERSKKM--KGPLLIHVVTKKGKGYMFAEK 288

Query: 378 SEAIEKQQEGAS-DSNSLPF-GNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQ 435
               +K    A  D  +  F G    +Y D F + L   A KD+ IV + A M     L 
Sbjct: 289 RP--DKFHSAAPFDIETGKFVGEGKDSYSDVFGKTLAEMALKDEKIVAITAAMPEGTGLI 346

Query: 436 LFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLP 495
            F +  P+R+FDVG+AEQHA TF+AGLA  G KP+  + S FLQRAYDQV++DV  Q+LP
Sbjct: 347 HFAKLIPDRFFDVGIAEQHATTFAAGLAVEGYKPYFAVYSTFLQRAYDQVIHDVCIQKLP 406

Query: 496 VRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVC 555
           V F +  AG+VG DG T  G FDI+F+  +PN+ +M+P D +ELV+MV    ++ D PV 
Sbjct: 407 VVFAVDRAGIVGEDGETHQGVFDISFLRAIPNIAIMSPKDANELVEMVKLSRNL-DFPVA 465

Query: 556 FRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGID 615
            RYPRG     D+      P   GKG+VL+EG+ +A+   G MV   + A  +L   GI+
Sbjct: 466 IRYPRGKAGEYDISRKPSFP--FGKGEVLLEGEKIAVFALGRMVSKSIDAAEILKGHGIN 523

Query: 616 VTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVKWR 674
             V + RF KPLD +L+ E+      ++TVE+  I GG GS      A+  LL+    +R
Sbjct: 524 PFVVNLRFVKPLDEELILEISNKVDLVVTVEDNVIAGGVGS------AILELLNGKKVYR 577

Query: 675 PIV---LPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTR 714
           P++    PD +IEH          GL    IA T L      R
Sbjct: 578 PVLRLGFPDKFIEHGDVESLFKKYGLDSQSIADTILQRYKEMR 620


>gi|197119726|ref|YP_002140153.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter bemidjiensis
           Bem]
 gi|197089086|gb|ACH40357.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter bemidjiensis
           Bem]
          Length = 635

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 259/645 (40%), Positives = 375/645 (58%), Gaps = 42/645 (6%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L  +  P  LK L  +EL  LA E+R+ L   V++T   L S+L AVELT+ALH+ F +
Sbjct: 4   LLSKINGPDDLKKLDAEELTPLAEEVRAFLLETVTRTGGHLASNLGAVELTIALHYCFDS 63

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P DKI+WDVG Q Y HKILTGRR   HT R   GISG+  R+ES +D F  GH   S+SA
Sbjct: 64  PKDKIIWDVGHQAYTHKILTGRRDSFHTQRCYKGISGFPKRAESPHDAFGVGHSSTSISA 123

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKI 260
           GLGMAVA+ +K     +++VI +G+   G A+EA++ AG+L  N+IV+LND+  S+    
Sbjct: 124 GLGMAVAQGLKEDAARVISVIGDGSLTGGMAFEALNQAGHLKKNLIVVLNDNEMSI---- 179

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKR---IGRGMHEWAAKVDEYARGMI 317
                 ++ ALSS +SR  +   +R L++  + +      IG  +  +A K +   +G +
Sbjct: 180 ----SKNVGALSSFISRKMTGGYYRSLKKEMEALMANIPAIGGNILHFAKKAENSLKGFL 235

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQ- 376
            P   TLFE LG  Y+GP+ GH++  L+ VL+ V  L   GP+L+HV+T++ +     + 
Sbjct: 236 TP--GTLFEGLGFEYVGPIAGHDLPTLLGVLENVKRL--EGPILLHVMTKKGKGYPPAET 291

Query: 377 ---KSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
              K   +   +  ++    LP      +Y   F   +V   E D  I+ + A M     
Sbjct: 292 MPDKFHGVAPTKPASASPAKLP----PPSYTSVFGNTMVKLGEIDPKILAITAAMPDGTG 347

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L  F E+FP+R+FDVG+AEQHA+TF+AGLA  G +P   I S F QRAYDQ+ +DV  Q+
Sbjct: 348 LTPFAERFPDRFFDVGIAEQHALTFAAGLAVEGFRPVAAIYSTFTQRAYDQIFHDVCLQK 407

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPV   +  AGLVG DGPT  G+FDI+++  LP + VMAP DE+EL  M+ T A    RP
Sbjct: 408 LPVTLALDRAGLVGDDGPTHHGSFDISYLRHLPELTVMAPKDENELQHMLKT-ALYSGRP 466

Query: 554 VCFRYPRGAIVRTDLPGYRGIPIE-------IGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
           +  RYPRGA       G+ G+P++       IGKG++L++G D+ ++  G+ V   L+A 
Sbjct: 467 ISLRYPRGA-------GF-GVPLDHELQELPIGKGELLIDGGDLTIVAIGSTVHPALEAA 518

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-IGGFGSHVSHFIALDG 665
           A L + GI   V +ARF KP+D +L+    +    L+TVEE + +GGFGS V   ++  G
Sbjct: 519 AQLRQKGIFAAVVNARFIKPIDSELILAQAKKTGCLVTVEENALLGGFGSAVLELLSDAG 578

Query: 666 LLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
           L  + V+ + I +PD +IE  +  Q  A  GL    IAAT  + L
Sbjct: 579 L--NAVRIKRIGIPDRFIEQGTQAQLRADLGLDAAGIAATCETFL 621


>gi|319897072|ref|YP_004135267.1| 1-deoxy-d-xylulose 5-phosphate synthase [Haemophilus influenzae
           F3031]
 gi|317432576|emb|CBY80936.1| 1-deoxy-D-xylulose 5-phosphate synthase [Haemophilus influenzae
           F3031]
          Length = 621

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 259/639 (40%), Positives = 375/639 (58%), Gaps = 32/639 (5%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+L L+ +P  L+ L   +L Q+  E+R+ L   VS+T   L S L  VELTVALH+V+ 
Sbjct: 5   PLLSLINSPEDLRLLNKDQLPQVCQELRAYLLESVSQTSGHLASGLGTVELTVALHYVYK 64

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG Q Y HKILTGRR  + T+R+KDGI  +  R ESE+D  + GH   S+S
Sbjct: 65  TPFDQLIWDVGHQAYPHKILTGRREQMSTIRQKDGIHPFPWREESEFDVLSVGHSSTSIS 124

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           AGLG+AVA + +      V VI +G   AG A+EA+++AG L ++M+VILND+  S+   
Sbjct: 125 AGLGIAVAAERENAGRKTVCVIGDGAITAGMAFEALNHAGALHTDMLVILNDNEMSI--- 181

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                  ++ AL++ L+RI S   +  LR+ +K +  ++   +  +  K +E+ +G++  
Sbjct: 182 -----SENVGALNNHLARIFSGSLYSTLRDGSKKILDKV-PPIKNFMKKTEEHMKGVMFS 235

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             STLFEELG  YIGPVDGHNI++L++ L  + +L   GP  +H+ T++ +     +K  
Sbjct: 236 PESTLFEELGFNYIGPVDGHNIDELVATLTNMRNL--KGPQFLHIKTKKGKGYAPAEKDP 293

Query: 380 -AIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQ 438
                  +    S  LP  N   TY   F + L   AEKD  I+ +   M     +  F 
Sbjct: 294 IGFHGVPKFDPISGELPKNNSKPTYSKIFGDWLCEMAEKDAKIIGITPAMREGSGMVEFS 353

Query: 439 EKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRF 498
           ++FP++YFDV +AEQHAVTF+ GLA GG KP   I S FLQRAYDQ+++DV  Q LPV F
Sbjct: 354 QRFPKQYFDVAIAEQHAVTFATGLAIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPVLF 413

Query: 499 VITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRY 558
            I  AG+VG+DG T  GAFDI+FM C+PNMI+M PSDE+E   M+ T      +P   RY
Sbjct: 414 AIDRAGIVGADGATHQGAFDISFMRCIPNMIIMTPSDENECRQMLYTGYQC-GKPAAVRY 472

Query: 559 PRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTV 618
           PRG  V   L     +P  IGK +++ +G+ +A+L +G ++ + L+   L  KL  + TV
Sbjct: 473 PRGNAVGVKLTPLEMLP--IGKSRLIRKGQKIAILNFGTLLPSALE---LSEKL--NATV 525

Query: 619 ADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG----LLDSGVKW 673
            D RF KP+DI+++  L Q H +L+T+EE +I GG GS V+  +   G    LL  G   
Sbjct: 526 VDMRFVKPIDIEMINVLAQTHDYLVTLEENAIQGGAGSAVAEVLNSSGKSTALLQLG--- 582

Query: 674 RPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
               LPD +I  A+  + LA  GL    I    L+ + +
Sbjct: 583 ----LPDYFIPQATQQEALADLGLDTKGIEEKILNFIAK 617


>gi|217967432|ref|YP_002352938.1| deoxyxylulose-5-phosphate synthase [Dictyoglomus turgidum DSM 6724]
 gi|226740149|sp|B8E247.1|DXS_DICTD RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|217336531|gb|ACK42324.1| deoxyxylulose-5-phosphate synthase [Dictyoglomus turgidum DSM 6724]
          Length = 618

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 259/637 (40%), Positives = 379/637 (59%), Gaps = 32/637 (5%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L  +E+P  LK L+I+ELK+L+ EIR  + + V      L S+L  VELT+ALH+VF A
Sbjct: 2   LLQKIESPKDLKKLSIEELKKLSSEIREIIINTVENNGGHLASNLGTVELTLALHYVFDA 61

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P DKI+WDVG Q Y HK++TGR    HTLR+  GISGY +  ESEYD F  GH   S+SA
Sbjct: 62  PKDKIIWDVGHQAYTHKLITGRAKDFHTLRQYGGISGYIAPWESEYDHFAVGHAGTSLSA 121

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKI 260
            LG A ARD+KG++  +V VI +G   +G A EA++  GYL++++IVILND+ HS+ P  
Sbjct: 122 ALGFAKARDLKGEKYKVVAVIGDGALTSGMALEALNQIGYLNTDLIVILNDNEHSISP-- 179

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKR--IGRGMHEWAAKVDEYARGMIG 318
                 ++ A++  L++++    +R  ++  + + K   IG+G+  +  K++   + ++ 
Sbjct: 180 ------NVGAMALYLAKLRKHPLYRFFKQTTQNLLKNSSIGKGLLAFDLKLERSLKSLL- 232

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEE---NRRAEDT 375
              + +FE LG  Y GP DGH+I  LISV + +    S  PVL+HV T++   ++ AE T
Sbjct: 233 -LENPMFEYLGFKYFGPFDGHDIPLLISVFKGIKDNLSC-PVLIHVTTKKGIGHKDAEAT 290

Query: 376 -QKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
             K  +I  + E       +P      TY + F +ALV       ++V + A M     L
Sbjct: 291 PSKFHSIGSKSE---KEKKVP------TYTEVFGKALVELGGMYPEVVAITAAMPEGTGL 341

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F ++FPER+FDVG+AEQHAVTF+AGLA  GLKP   I S FLQR++DQ+++DV  Q+L
Sbjct: 342 SYFAQRFPERFFDVGIAEQHAVTFAAGLAKNGLKPVVAIYSTFLQRSFDQIIHDVCLQKL 401

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           P+ FV+  AG+V  DGPT  G FD++++  +PNM++ AP DE EL D++ T  +    P 
Sbjct: 402 PITFVLDRAGIVSDDGPTHQGIFDLSYLRLIPNMVIAAPKDESELRDLLYTAINYPG-PF 460

Query: 555 CFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGI 614
             RYP+G  V  +L   R   IEIGK +++ +G+DV +L  G+MV   ++A  +L   GI
Sbjct: 461 AIRYPKGKGVGVELKN-RFEKIEIGKSEIVKQGRDVLILAIGSMVYPAVEAGNILRSEGI 519

Query: 615 DVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVKW 673
             TV + RF KPLDI  + EL  +H  +ITVEE  I GG    ++  I    +L    K 
Sbjct: 520 YPTVVNVRFLKPLDILTLEELILSHNTIITVEENVITGGLFGAIAELI---NILKINKKV 576

Query: 674 RPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
            PI LPD +IE  +      + GL  + IA   +S+L
Sbjct: 577 IPIGLPDKFIEQGNVQLLRDIYGLNEYKIAEKIISVL 613


>gi|319776298|ref|YP_004138786.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           F3047]
 gi|317450889|emb|CBY87114.1| 1-deoxy-D-xylulose 5-phosphate synthase [Haemophilus influenzae
           F3047]
          Length = 621

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 260/639 (40%), Positives = 374/639 (58%), Gaps = 32/639 (5%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+L L+ +P  L+ L   +L QL  E+R  L   VS+T   L S L  VELTVALH+V+ 
Sbjct: 5   PLLSLINSPEDLRLLNKDQLPQLCQELRGYLLESVSQTSGHLASGLGTVELTVALHYVYK 64

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG Q Y HKILTGRR  + T+R+KDGI  +  R ESE+D  + GH   S+S
Sbjct: 65  TPFDQLIWDVGHQAYPHKILTGRRDQMSTIRQKDGIHPFPWREESEFDVLSVGHSSTSIS 124

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           AGLG+AVA + +      V VI +G   AG A+EA+++AG L ++M+VILND+  S+   
Sbjct: 125 AGLGIAVAAERENAGRKTVCVIGDGAITAGMAFEALNHAGALHTDMLVILNDNEMSI--- 181

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                  ++ AL++ L+RI S   +  LR+ +K +  ++   +  +  K +E+ +G++  
Sbjct: 182 -----SENVGALNNHLARIFSGSLYSTLRDGSKKILDKV-PPIKNFMKKTEEHMKGVMFS 235

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             STLFEELG  YIGPVDGHNI++L++ L  + +L   GP  +H+ T++ +     +K  
Sbjct: 236 PESTLFEELGFNYIGPVDGHNIDELVATLTNMRNL--KGPQFLHIKTKKGKGYAPAEKDP 293

Query: 380 -AIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQ 438
                  +    S  LP  N   TY   F + L   AEKD  I+ +   M     +  F 
Sbjct: 294 IGFHGVPKFDPISGELPKNNSKPTYSKIFGDWLCEMAEKDAKIIGITPAMREGSGMVEFS 353

Query: 439 EKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRF 498
           ++FP++YFDV +AEQHAVTF+ GLA GG KP   I S FLQRAYDQ+++DV  Q LPV F
Sbjct: 354 QRFPKQYFDVAIAEQHAVTFATGLAIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPVLF 413

Query: 499 VITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRY 558
            I  AG+VG+DG T  GAFDI+FM C+PNMI+M PSDE+E   M+ T      +P   RY
Sbjct: 414 AIDRAGIVGADGATHQGAFDISFMRCIPNMIIMTPSDENECRQMLYTGYQC-GKPAAVRY 472

Query: 559 PRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTV 618
           PRG  V   L     +P  IGK +++ +G+ +A+L +G ++ + L+   L  KL  + TV
Sbjct: 473 PRGNAVGVKLTPLEMLP--IGKSRLIRKGQKIAILNFGTLLPSALE---LSEKL--NPTV 525

Query: 619 ADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG----LLDSGVKW 673
            D RF KP+DI+++  L Q H +L+T+EE +I GG GS V+  +   G    LL  G   
Sbjct: 526 VDMRFVKPIDIEMINMLAQTHDYLVTLEENAIQGGAGSAVAEVLNSSGKSTALLQLG--- 582

Query: 674 RPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
               LPD +I  A+  + LA  GL    I    L+ + +
Sbjct: 583 ----LPDYFIPQATQQEALADLGLDTKGIEEKILNFIAK 617


>gi|428298117|ref|YP_007136423.1| 1-deoxy-D-xylulose-5-phosphate synthase [Calothrix sp. PCC 6303]
 gi|428234661|gb|AFZ00451.1| 1-deoxy-D-xylulose-5-phosphate synthase [Calothrix sp. PCC 6303]
          Length = 635

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 244/634 (38%), Positives = 368/634 (58%), Gaps = 19/634 (2%)

Query: 82  LDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAP 141
           L  + +P +L  L++++L+ +A +IR +    V+ T   L   L  VELT+ L+      
Sbjct: 3   LSEITHPNQLHGLSVRQLQAIAQQIRDKHLQTVAATGGHLGPGLGVVELTLGLYQTLDLD 62

Query: 142 VDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAG 201
            DK++WDVG Q Y HK++TGR    HTLR+KDG++GY  R E+++D F AGH   S+SAG
Sbjct: 63  QDKVIWDVGHQAYPHKLITGRYQDFHTLRQKDGVAGYLKRCENKFDHFGAGHASTSISAG 122

Query: 202 LGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPKI 260
           LGMA+ARD KG++  +V++I +G    G A EA+++AG++  +N++V+LND+  S+ P +
Sbjct: 123 LGMAMARDAKGEKFKVVSIIGDGALTGGMALEAINHAGHMPKTNLLVVLNDNEMSISPNV 182

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQ 320
              P+       S   +  S     Q + +       +G  +    A++ E  + +  P+
Sbjct: 183 GAIPRYLNKMRLSPPIQFFSGNIEEQFKNI-----PFVGESLSPELARIKEGMKRLAVPK 237

Query: 321 GSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSEA 380
              +FEELG  Y+GPVDGHN+E+LI+  Q+   +   GPVLVHV T + +  E  +K + 
Sbjct: 238 VGAVFEELGFTYMGPVDGHNLEELITTFQQAHQI--TGPVLVHVATTKGKGYEIAEKDQV 295

Query: 381 IEKQQE--GASDSNSLPFGN-YSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLF 437
               Q     +   ++P        Y   F   LV  AE++  I+ + A M     L   
Sbjct: 296 GYHAQTPFNPTTGKAIPSTKPKPPAYAKVFAHTLVKLAEQNPKIIGITAAMATGTGLDKL 355

Query: 438 QEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVR 497
           Q+K P +Y DVG+AEQHAVT SAGLAC G++P   I S FLQRA+DQ+++DV  Q LPV 
Sbjct: 356 QQKLPNQYIDVGIAEQHAVTLSAGLACEGMRPVVAIYSTFLQRAFDQIIHDVCIQNLPVF 415

Query: 498 FVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFR 557
           F +  AG+VG+DGPT  G +DI ++ C+PNM++MAP DE EL  M+ T       P+  R
Sbjct: 416 FCLDRAGIVGADGPTHQGMYDIAYLRCIPNMVLMAPKDEAELQRMIVTGVDYTSGPIAMR 475

Query: 558 YPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVT 617
           +PRG+     L      P+EIGKG++L  G DV L+ YG MV + ++   +L++ GI  T
Sbjct: 476 FPRGSGYGVPLMEEGWEPLEIGKGEILRHGDDVLLVAYGTMVNSAMQTAEVLNEHGIQAT 535

Query: 618 VADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSG--VKWR 674
           V +ARF KPLD +L+  L +    ++T+EEG + GGFG+ V+     + LLD+   V  +
Sbjct: 536 VVNARFAKPLDTELILPLAKKIGRVVTLEEGCVMGGFGTAVA-----EALLDADVVVPVK 590

Query: 675 PIVLPDNYIEHASPTQQLALAGLTGHHIAATALS 708
            I +PD  ++HA P Q     GLT   IA + ++
Sbjct: 591 RIGIPDILVDHAEPDQSKVELGLTSSQIAESVMT 624


>gi|53716443|ref|YP_105137.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei ATCC
           23344]
 gi|53722783|ref|YP_111768.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           K96243]
 gi|76819327|ref|YP_336000.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           1710b]
 gi|126456504|ref|YP_001076424.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           1106a]
 gi|167820730|ref|ZP_02452410.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           91]
 gi|167829089|ref|ZP_02460560.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           9]
 gi|167850566|ref|ZP_02476074.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           B7210]
 gi|167907502|ref|ZP_02494707.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           NCTC 13177]
 gi|226195571|ref|ZP_03791158.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           Pakistan 9]
 gi|242313679|ref|ZP_04812696.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           1106b]
 gi|254186153|ref|ZP_04892671.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           Pasteur 52237]
 gi|254194253|ref|ZP_04900685.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           S13]
 gi|254208408|ref|ZP_04914757.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei JHU]
 gi|254263208|ref|ZP_04954073.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           1710a]
 gi|254301206|ref|ZP_04968650.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           406e]
 gi|81606250|sp|Q63JF4.1|DXS_BURPS RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|81684641|sp|Q62DU1.1|DXS_BURMA RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|119368198|sp|Q3JKA3.1|DXS_BURP1 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|166198604|sp|A3P7W4.1|DXS_BURP0 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|52213197|emb|CAH39237.1| 1-deoxy-D-xylulose 5-phosphate synthase [Burkholderia pseudomallei
           K96243]
 gi|52422413|gb|AAU45983.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei ATCC
           23344]
 gi|76583800|gb|ABA53274.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           1710b]
 gi|126230272|gb|ABN93685.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           1106a]
 gi|147751095|gb|EDK58163.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei JHU]
 gi|157810695|gb|EDO87865.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           406e]
 gi|157933839|gb|EDO89509.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           Pasteur 52237]
 gi|169651004|gb|EDS83697.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           S13]
 gi|225932056|gb|EEH28056.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           Pakistan 9]
 gi|242136918|gb|EES23321.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           1106b]
 gi|254214210|gb|EET03595.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           1710a]
          Length = 634

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 270/641 (42%), Positives = 381/641 (59%), Gaps = 46/641 (7%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L  +++P  L+ L  ++L+ LA E+R+ +   VSKT   L S+L  VELT+ALH+VF+ 
Sbjct: 4   LLKTIDDPADLRRLDRRQLQPLADELRAFVLDSVSKTGGHLSSNLGTVELTIALHYVFNT 63

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+I+WDVG QTY HKILTGRR  + TLR+ DGISG+  RSESEYD F   H   S+SA
Sbjct: 64  PDDRIVWDVGHQTYPHKILTGRRDGMKTLRQFDGISGFPRRSESEYDTFGTAHSSTSISA 123

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPK 259
            LGMA+   + G     + VI +G   AG A+EAM+NAG   D+ ++VILND+  S+ P 
Sbjct: 124 ALGMAIGSKLNGDDRFSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDNDMSISP- 182

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                   + AL+  L+R+ S + +   R   + +   +   + E A K++E+A+GM+ P
Sbjct: 183 -------PVGALNRHLARLMSGRFYAAARAGVERVLS-VAPPVLELARKLEEHAKGMVVP 234

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             +TLFEE G  YIGP+DGH+++ LI  LQ +  L   GP  +HVVT   ++ +  + +E
Sbjct: 235 --ATLFEEFGFNYIGPIDGHDLDSLIPTLQNIKEL--RGPQFLHVVT---KKGQGYKLAE 287

Query: 380 AIEKQQEGASDSNSLPFGNYS-----RTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
           A      G    N       S     +TY   F E L   AE D  +V +   M     +
Sbjct: 288 ADPVLYHGPGKFNPAEGIKPSTTPAKKTYTQVFGEWLCDAAELDARVVGITPAMREGSGM 347

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F+++FPERY+DVG+AEQHAVTF+ GLA  GLKP   I S FLQRAYDQ+++DV  Q L
Sbjct: 348 VEFEKRFPERYYDVGIAEQHAVTFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNL 407

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PV F I  AGLVG+DG T  GA+D+ F+ C+PNM VMA SDE+E   M+ T A     P 
Sbjct: 408 PVVFAIDRAGLVGADGATHAGAYDLAFLRCIPNMTVMAASDENECRQMLHT-ALQQPNPT 466

Query: 555 CFRYPRGAIVR-TDLPGYRGIPIEIGKGKVL-----VEGKDVALLGYGAMVQNCLKARAL 608
             RYPRGA      +  +  IP  +GKG+V       +GK +A+L +G MV     A +L
Sbjct: 467 AVRYPRGAGTGVATVKAFTEIP--LGKGEVRRRTSQPDGKRIAILAFGTMV-----APSL 519

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLL 667
            +   +D TVA+ RF KP+D +LV+ L + H +L+TVEEG + GG GS       ++ ++
Sbjct: 520 AAADALDATVANMRFVKPIDAELVQALARTHDYLVTVEEGCVMGGAGS-----ACVEAMM 574

Query: 668 DSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAAT 705
           +SG   RP++   LPD +++H  P + L+L GL G  IA +
Sbjct: 575 ESGA-VRPVLQLGLPDRFVDHGDPAKLLSLCGLDGDGIAKS 614


>gi|152979790|ref|YP_001352021.1| 1-deoxy-D-xylulose-5-phosphate synthase [Janthinobacterium sp.
           Marseille]
 gi|151279867|gb|ABR88277.1| 1-deoxy-D-xylulose-5-phosphate synthase [Janthinobacterium sp.
           Marseille]
          Length = 621

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 266/651 (40%), Positives = 375/651 (57%), Gaps = 46/651 (7%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L+ + +P  ++ LT  +LKQLA E+R+ +   VS T   L S+L  VELT+ALH+VF+ 
Sbjct: 3   LLETINDPADVRQLTRPQLKQLADELRAFVLESVSATGGHLSSNLGTVELTIALHNVFNT 62

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+I+WDVG QTY HKILTGRR  +H+LR+ DGISG+  R ES YD F   H   S+SA
Sbjct: 63  PEDRIIWDVGHQTYPHKILTGRRDQMHSLRQIDGISGFPRRDESPYDTFGTAHSSTSISA 122

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAG-YLDSNMIVILNDSRHSLHPK 259
            LGMA+A   KG+    + VI +G   AG A+EAM+NAG + D N++V+LND+  S+ P 
Sbjct: 123 ALGMALAAKTKGEDRHAIAVIGDGAMTAGMAFEAMNNAGIHDDINLLVVLNDNDMSISP- 181

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                   + AL+  L+R+ S + +   + V K +   +   M E A + +E+A+GMI P
Sbjct: 182 -------PVGALNRYLARLMSGQFYAAAKNVGKTV---LPAPMRELAKRFEEHAKGMIVP 231

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             +T+FEE G  YIGP+DGH+++ LI  LQ + +L   GP  +HVVT   R+ +  + +E
Sbjct: 232 --ATMFEEFGFNYIGPIDGHDLDSLIPTLQNLKNL--KGPQFLHVVT---RKGQGYKLAE 284

Query: 380 AIEKQQEGASDSNSL----PFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQ 435
           A      G    +      P      TY   F + L   A  DK +V +   M     + 
Sbjct: 285 ADPVLYHGPGKFDPAEGIKPSTAKKVTYTSVFGDWLCDMAAADKRLVGITPAMREGSGMV 344

Query: 436 LFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLP 495
            F+ +FP+RY+DVG+AEQHAVTF+AG+AC GLKP   I S FLQR YDQ+++DV  Q L 
Sbjct: 345 EFERRFPDRYYDVGIAEQHAVTFAAGMACEGLKPVVAIYSTFLQRGYDQLIHDVALQNLD 404

Query: 496 VRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVC 555
           V F +  +GLVG+DG T  G +DI ++ C+PNM+VMA SDE+E   M++T       P  
Sbjct: 405 VTFALDRSGLVGADGATHAGNYDIAYLRCIPNMVVMAASDENECRQMLSTGFDYQG-PAA 463

Query: 556 FRYPR----GAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSK 611
            RYPR    GA V TDL       I +G G++  EGK +A+L +G MV   L A   L  
Sbjct: 464 VRYPRGGGIGAKVGTDL-----ATIPLGTGEIKREGKGIAILAFGTMVAPSLSAGEEL-- 516

Query: 612 LGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGV 671
              D TVA+ RF KPLD++L++ L   H  L+TVEEGSI G              +    
Sbjct: 517 ---DATVANMRFIKPLDVELLKRLAATHDALVTVEEGSIMGGAGAAVAEAMAAAGI---- 569

Query: 672 KWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLL 719
             +P++   LPD +I+H    + LAL GL    IA +     G+ +  L++
Sbjct: 570 -VKPLLNLGLPDQFIDHGDAGKLLALCGLDAAGIATSIRKRFGKDQPRLVV 619


>gi|68250029|ref|YP_249141.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           86-028NP]
 gi|81335547|sp|Q4QKG6.1|DXS_HAEI8 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|68058228|gb|AAX88481.1| 1-deoxy-D-xylulose 5-phosphate synthase [Haemophilus influenzae
           86-028NP]
          Length = 625

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 259/639 (40%), Positives = 375/639 (58%), Gaps = 32/639 (5%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+L L+ +P  L+ L   +L QL  E+R+ L   VS+T   L S L  VELTVALH+V+ 
Sbjct: 9   PLLSLINSPEDLRLLNKDQLPQLCQELRAYLLESVSQTSGHLASGLGTVELTVALHYVYK 68

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG Q Y HKILTGRR  + T+R+KDGI  +  R ESE+D  + GH   S+S
Sbjct: 69  TPFDQLIWDVGHQAYPHKILTGRREQMSTIRQKDGIHPFPWREESEFDVLSVGHSSTSIS 128

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           AGLG+AVA + +      V VI +G   AG A+EA+++AG L ++M+VILND+  S+   
Sbjct: 129 AGLGIAVAAERENAGRKTVCVIGDGAITAGMAFEALNHAGALHTDMLVILNDNEMSI--- 185

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                  ++ AL++ L+RI S   +  LR+ +K +  ++   +  +  K +E+ +G++  
Sbjct: 186 -----SENVGALNNHLARIFSGSLYSTLRDGSKKILDKV-PPIKNFMKKTEEHMKGVMFS 239

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             STLFEELG  YIGPVDGHNI++L+++L  + +L   GP  +H+ T++ +     +K  
Sbjct: 240 PESTLFEELGFNYIGPVDGHNIDELVAMLTNMRNL--KGPQFLHIKTKKGKGYAPAEKDP 297

Query: 380 -AIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQ 438
                  +    S  LP  N   TY   F + L   AEKD  I+ +   M     +  F 
Sbjct: 298 IGFHGVPKFDPISGELPKNNSKPTYSKIFGDWLCEMAEKDAKIIGITPAMREGSGMVEFS 357

Query: 439 EKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRF 498
           ++FP++YFDV +AEQH VTF+ GLA GG KP   I S FLQRAYDQ+++DV  Q LPV F
Sbjct: 358 QRFPKQYFDVAIAEQHTVTFATGLAIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPVLF 417

Query: 499 VITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRY 558
            I  AG+VG+DG T  GAFDI+FM C+PNMI+M PSDE+E   M+ T      +P   RY
Sbjct: 418 AIDRAGIVGADGATHQGAFDISFMRCIPNMIIMTPSDENECRQMLYTGYQC-GKPAAVRY 476

Query: 559 PRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTV 618
           PRG  V   L     +P  IGK +++ +G+ +A+L +G ++ + L+   L  KL  + TV
Sbjct: 477 PRGNAVGVKLTPLEMLP--IGKSRLIRKGQKIAILNFGTLLPSALE---LSEKL--NATV 529

Query: 619 ADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG----LLDSGVKW 673
            D RF KP+DI+++  L Q H +L+T+EE +I GG GS V+  +   G    LL  G   
Sbjct: 530 VDMRFVKPIDIEMINVLAQTHDYLVTLEENAIQGGAGSAVAEVLNSSGKSTALLQLG--- 586

Query: 674 RPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
               LPD +I  A+  + LA  GL    I    L+ + +
Sbjct: 587 ----LPDYFIPQATRQEALADLGLDTKGIEEKILNFIAK 621


>gi|167724591|ref|ZP_02407827.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           DM98]
 gi|167743542|ref|ZP_02416316.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           14]
 gi|167899159|ref|ZP_02486560.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           7894]
 gi|167923680|ref|ZP_02510771.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           BCC215]
 gi|254184924|ref|ZP_04891513.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           1655]
 gi|386865571|ref|YP_006278519.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           1026b]
 gi|418397014|ref|ZP_12970764.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           354a]
 gi|418536792|ref|ZP_13102461.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           1026a]
 gi|418544103|ref|ZP_13109415.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           1258a]
 gi|418550944|ref|ZP_13115891.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           1258b]
 gi|418556611|ref|ZP_13121235.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           354e]
 gi|184215516|gb|EDU12497.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           1655]
 gi|385350375|gb|EIF56919.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           1258b]
 gi|385350772|gb|EIF57294.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           1258a]
 gi|385351684|gb|EIF58150.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           1026a]
 gi|385366776|gb|EIF72378.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           354e]
 gi|385369578|gb|EIF74893.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           354a]
 gi|385662699|gb|AFI70121.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           1026b]
          Length = 634

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 270/641 (42%), Positives = 381/641 (59%), Gaps = 46/641 (7%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L  +++P  L+ L  ++L+ LA E+R+ +   VSKT   L S+L  VELT+ALH+VF+ 
Sbjct: 4   LLKTIDDPADLRRLDRRQLQPLADELRAFVLDSVSKTGGHLSSNLGTVELTIALHYVFNT 63

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+I+WDVG QTY HKILTGRR  + TLR+ DGISG+  RSESEYD F   H   S+SA
Sbjct: 64  PDDRIVWDVGHQTYPHKILTGRRDGMKTLRQFDGISGFPRRSESEYDTFGTAHSSTSISA 123

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPK 259
            LGMA+   + G     + VI +G   AG A+EAM+NAG   D+ ++VILND+  S+ P 
Sbjct: 124 ALGMAIGSKLNGDDRFSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDNDMSISP- 182

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                   + AL+  L+R+ S + +   R   + +   +   + E A K++E+A+GM+ P
Sbjct: 183 -------PVGALNRHLARLMSGRFYAAARAGVERVLS-VAPPVLELARKLEEHAKGMVVP 234

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             +TLFEE G  YIGP+DGH+++ LI  LQ +  L   GP  +HVVT   ++ +  + +E
Sbjct: 235 --ATLFEEFGFNYIGPIDGHDLDSLIPTLQNIKEL--RGPQFLHVVT---KKGQGYKLAE 287

Query: 380 AIEKQQEGASDSNSLPFGNYS-----RTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
           A      G    N       S     +TY   F E L   AE D  +V +   M     +
Sbjct: 288 ADPVLYHGPGKFNPAEGIKPSTTPAKKTYTQVFGEWLCDAAELDARVVGITPAMREGSGM 347

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F+++FPERY+DVG+AEQHAVTF+ GLA  GLKP   I S FLQRAYDQ+++DV  Q L
Sbjct: 348 VEFEKRFPERYYDVGIAEQHAVTFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNL 407

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PV F I  AGLVG+DG T  GA+D+ F+ C+PNM VMA SDE+E   M+ T A     P 
Sbjct: 408 PVVFAIDRAGLVGADGATHAGAYDLAFLRCIPNMTVMAASDENECRQMLHT-ALQQPNPT 466

Query: 555 CFRYPRGAIVR-TDLPGYRGIPIEIGKGKVL-----VEGKDVALLGYGAMVQNCLKARAL 608
             RYPRGA      +  +  IP  +GKG+V       +GK +A+L +G MV     A +L
Sbjct: 467 AVRYPRGAGTGVATVKAFTEIP--LGKGEVRRRTSQPDGKRIAILAFGTMV-----APSL 519

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLL 667
            +   +D TVA+ RF KP+D +LV+ L + H +L+TVEEG + GG GS       ++ ++
Sbjct: 520 AAADALDATVANMRFVKPIDAELVQALARTHDYLVTVEEGCVMGGAGS-----ACVEAMM 574

Query: 668 DSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAAT 705
           +SG   RP++   LPD +++H  P + L+L GL G  IA +
Sbjct: 575 ESGA-VRPVLQLGLPDRFVDHGDPAKLLSLCGLDGDGIAKS 614


>gi|121596455|ref|YP_991107.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei SAVP1]
 gi|124381982|ref|YP_001025505.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei NCTC
           10229]
 gi|126445825|ref|YP_001077568.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei NCTC
           10247]
 gi|238561513|ref|ZP_00441961.2| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei GB8
           horse 4]
 gi|251767135|ref|ZP_02266099.2| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei
           PRL-20]
 gi|254177253|ref|ZP_04883909.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei ATCC
           10399]
 gi|254203075|ref|ZP_04909437.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei FMH]
 gi|254359404|ref|ZP_04975676.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei
           2002721280]
 gi|121224253|gb|ABM47784.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei SAVP1]
 gi|126238679|gb|ABO01791.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei NCTC
           10247]
 gi|147746120|gb|EDK53198.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei FMH]
 gi|148028591|gb|EDK86551.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei
           2002721280]
 gi|160698293|gb|EDP88263.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei ATCC
           10399]
 gi|238524498|gb|EEP87931.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei GB8
           horse 4]
 gi|243063767|gb|EES45953.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei
           PRL-20]
 gi|261826589|gb|ABM99911.2| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei NCTC
           10229]
          Length = 651

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 270/641 (42%), Positives = 381/641 (59%), Gaps = 46/641 (7%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L  +++P  L+ L  ++L+ LA E+R+ +   VSKT   L S+L  VELT+ALH+VF+ 
Sbjct: 21  LLKTIDDPADLRRLDRRQLQPLADELRAFVLDSVSKTGGHLSSNLGTVELTIALHYVFNT 80

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+I+WDVG QTY HKILTGRR  + TLR+ DGISG+  RSESEYD F   H   S+SA
Sbjct: 81  PDDRIVWDVGHQTYPHKILTGRRDGMKTLRQFDGISGFPRRSESEYDTFGTAHSSTSISA 140

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPK 259
            LGMA+   + G     + VI +G   AG A+EAM+NAG   D+ ++VILND+  S+ P 
Sbjct: 141 ALGMAIGSKLNGDDRFSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDNDMSISP- 199

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                   + AL+  L+R+ S + +   R   + +   +   + E A K++E+A+GM+ P
Sbjct: 200 -------PVGALNRHLARLMSGRFYAAARAGVERVLS-VAPPVLELARKLEEHAKGMVVP 251

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             +TLFEE G  YIGP+DGH+++ LI  LQ +  L   GP  +HVVT   ++ +  + +E
Sbjct: 252 --ATLFEEFGFNYIGPIDGHDLDSLIPTLQNIKEL--RGPQFLHVVT---KKGQGYKLAE 304

Query: 380 AIEKQQEGASDSNSLPFGNYS-----RTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
           A      G    N       S     +TY   F E L   AE D  +V +   M     +
Sbjct: 305 ADPVLYHGPGKFNPAEGIKPSTTPAKKTYTQVFGEWLCDAAELDARVVGITPAMREGSGM 364

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F+++FPERY+DVG+AEQHAVTF+ GLA  GLKP   I S FLQRAYDQ+++DV  Q L
Sbjct: 365 VEFEKRFPERYYDVGIAEQHAVTFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNL 424

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PV F I  AGLVG+DG T  GA+D+ F+ C+PNM VMA SDE+E   M+ T A     P 
Sbjct: 425 PVVFAIDRAGLVGADGATHAGAYDLAFLRCIPNMTVMAASDENECRQMLHT-ALQQPNPT 483

Query: 555 CFRYPRGAIVR-TDLPGYRGIPIEIGKGKVL-----VEGKDVALLGYGAMVQNCLKARAL 608
             RYPRGA      +  +  IP  +GKG+V       +GK +A+L +G MV     A +L
Sbjct: 484 AVRYPRGAGTGVATVKAFTEIP--LGKGEVRRRTSQPDGKRIAILAFGTMV-----APSL 536

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLL 667
            +   +D TVA+ RF KP+D +LV+ L + H +L+TVEEG + GG GS       ++ ++
Sbjct: 537 AAADALDATVANMRFVKPIDAELVQALARTHDYLVTVEEGCVMGGAGS-----ACVEAMM 591

Query: 668 DSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAAT 705
           +SG   RP++   LPD +++H  P + L+L GL G  IA +
Sbjct: 592 ESGA-VRPVLQLGLPDRFVDHGDPAKLLSLCGLDGDGIAKS 631


>gi|229844083|ref|ZP_04464224.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           6P18H1]
 gi|229813077|gb|EEP48765.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           6P18H1]
          Length = 625

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 259/624 (41%), Positives = 368/624 (58%), Gaps = 34/624 (5%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+L L+ +P  L+ L   +L QL  E+R+ L   VS+T   L S L  VELTVALH+V+ 
Sbjct: 9   PLLSLINSPEDLRLLNKDQLPQLCQELRAYLLESVSQTSGHLASGLGTVELTVALHYVYK 68

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG Q Y HKILTGRR  + T+R+K GI  +  R ESE+D  + GH   S+S
Sbjct: 69  TPFDQLIWDVGHQAYPHKILTGRREQMSTIRQKGGIHPFPWREESEFDVLSVGHSSTSIS 128

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           AGLG+AVA + +      V VI +G+  AG A+EA+++AG L ++M+VILND+  S+   
Sbjct: 129 AGLGIAVAAERENASRKTVCVIGDGSITAGMAFEALNHAGALHTDMLVILNDNEMSI--- 185

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                  ++ AL++ L+RI S   +  LR+ +K +  ++   +  +  K +E+ +G++  
Sbjct: 186 -----SENVGALNNHLARIFSGSLYSTLRDGSKKILDKV-PPIKNFMKKTEEHMKGVMFS 239

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             STLFEELG  YIGPVDGHNIE+L++ L  + +L   GP  +H+ T++ +     +K  
Sbjct: 240 PESTLFEELGFNYIGPVDGHNIEELVATLTNMRNL--KGPQFLHIKTKKGKGYAPAEKDP 297

Query: 380 -AIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQ 438
                  +    S  LP  N   TY   F + L   AEKD  I+ +   M     +  F 
Sbjct: 298 IGFHGVPKFDPISGELPKNNSKPTYSKIFGDWLCEMAEKDAKIIGITPAMREGSGMVEFS 357

Query: 439 EKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRF 498
           ++FP++YFDV +AEQHAVTF+ GLA GG KP   I S FLQRAYDQ+++DV  Q LPV F
Sbjct: 358 QRFPKQYFDVAIAEQHAVTFATGLAIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPVLF 417

Query: 499 VITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRY 558
            I  AG+VG+DG T  GAFD++FM C+PNMI+M PSDE+E   M+ T      +P   RY
Sbjct: 418 AIDRAGIVGADGATHQGAFDLSFMRCIPNMIIMTPSDENECRQMLYTGYQC-GKPAAVRY 476

Query: 559 PRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTV 618
           PRG  V   L     +P  IGK +++  G+ +A+L +G ++ + L+A   L     + TV
Sbjct: 477 PRGNAVGVKLNPLEMLP--IGKSRLIRGGQKIAILNFGTLLPSALEASEKL-----NATV 529

Query: 619 ADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG----LLDSGVKW 673
            D RF KP+DI+++  L Q H +L+T+EE +I GG GS VS  +   G    LL  G   
Sbjct: 530 VDMRFVKPIDIEMINVLAQTHDYLVTLEENAIQGGAGSAVSEVLNSSGKSTALLQLG--- 586

Query: 674 RPIVLPDNYIEHASPTQQLALAGL 697
               LPD +I  A  TQQ AL  L
Sbjct: 587 ----LPDYFIPQA--TQQEALEDL 604


>gi|385855881|ref|YP_005902394.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
           M01-240355]
 gi|325204822|gb|ADZ00276.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
           M01-240355]
          Length = 635

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 267/647 (41%), Positives = 375/647 (57%), Gaps = 51/647 (7%)

Query: 78  PTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHV 137
           P+P+LDL++NP  L+ L  K+L Q+A E+R  L   V +T     S+L AVELTVALH+V
Sbjct: 3   PSPLLDLIDNPQDLRRLDKKQLPQVAAELREFLLESVGQTGGHFASNLGAVELTVALHYV 62

Query: 138 FHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNS 197
           +H P DK++WDVG Q+Y HKILTGR++ +HT+R+  G++G+  RSESEYD F  GH   S
Sbjct: 63  YHTPEDKLVWDVGHQSYPHKILTGRKNQMHTMRRYGGLAGFPKRSESEYDAFGVGHSSTS 122

Query: 198 VSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLH 257
           + A LGMA A  I G     V +I +G   AGQA+EA++ AG +D N++VILND+  S+ 
Sbjct: 123 IGAALGMAAADKILGSDRRSVAIIGDGAMTAGQAFEALNCAGDMDVNLLVILNDNEMSIS 182

Query: 258 PKIEESPK-------TSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVD 310
           P +   PK         +  L ST+ + QSSK   +L             G  E A KV+
Sbjct: 183 PNVGALPKYLASNVVRDMRGLLSTI-KAQSSKVLDKL------------PGAMELAQKVE 229

Query: 311 EYARGMIGP-----QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVV 365
              + + G      Q  +LFE  G  Y GPVDGHN+E L+ VL+++ S    GP L+HV+
Sbjct: 230 HKIKTLAGEAEHARQSLSLFENFGFRYTGPVDGHNVEHLVDVLKDLRS--RKGPQLLHVI 287

Query: 366 TEEN---RRAE-DTQKSEAIEK-QQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKD 420
           T++    + AE D  K  A+    +E A+   S        TY   F + L   A  D  
Sbjct: 288 TKKGNGYKLAENDPVKYHAVANLPKESAAQMPSENKPAAKPTYTQVFGKWLCDRAAADSR 347

Query: 421 IVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQR 480
           +V +   M     L  F+++FP+RYFDVG+AEQHAVTF+ GLAC G+KP   I S FLQR
Sbjct: 348 LVAITPAMREGSGLVEFEQRFPDRYFDVGIAEQHAVTFAGGLACEGMKPVVAIYSTFLQR 407

Query: 481 AYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELV 540
           AYDQ+V+D+  Q LPV F +  AG+VG+DGPT  G +D++F+ C+PNMIV APSDE+E  
Sbjct: 408 AYDQLVHDIALQNLPVLFAVDRAGIVGADGPTHAGLYDLSFLRCVPNMIVAAPSDENECR 467

Query: 541 DMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGI-PIEIGKGKVLVEGKDVALLGYGAMV 599
            +++T     D P   RYPRG    T +P   G+  +EIGKG +  EG+  A + +G+MV
Sbjct: 468 LLLSTCYQA-DAPAAVRYPRG--TGTGVPVSDGMETVEIGKGIIRREGEKTAFIAFGSMV 524

Query: 600 QNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-IGGFGSHVS 658
              L   A+  KL  + TVAD RF KP+D +L+  L ++H  ++T+EE +  GG G  V 
Sbjct: 525 APAL---AVAEKL--NATVADMRFVKPIDEELIVRLARSHDRIVTLEENAEQGGAGGAVL 579

Query: 659 HFIALDGLLDSGVKWRPIVL---PDNYIEHASPTQQLALAGLTGHHI 702
             +A  G+       +P++L    D    H  P + L   GL+   +
Sbjct: 580 EVLAKHGIC------KPVLLLGVADTVTGHGDPKKLLDDLGLSAEAV 620


>gi|428781127|ref|YP_007172913.1| 1-deoxy-D-xylulose-5-phosphate synthase [Dactylococcopsis salina
           PCC 8305]
 gi|428695406|gb|AFZ51556.1| 1-deoxy-D-xylulose-5-phosphate synthase [Dactylococcopsis salina
           PCC 8305]
          Length = 637

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 250/635 (39%), Positives = 367/635 (57%), Gaps = 27/635 (4%)

Query: 85  VENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDK 144
           + +P +L  L++++L+ +A +IR +    VS +   L   L  VELT+ L+       DK
Sbjct: 6   ITHPNQLHGLSVRQLETIARQIREKHLETVSTSGGHLGPGLGVVELTLGLYQTLDLDRDK 65

Query: 145 ILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGM 204
           ++WDVG Q Y HK++TGR     TLR+KDGI+GY  R ES++D F AGH   S+SAGLGM
Sbjct: 66  VIWDVGHQAYPHKLITGRYHRFDTLRQKDGIAGYLKRCESQFDHFGAGHASTSISAGLGM 125

Query: 205 AVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPKIEES 263
           A+ARD KG+   +V++I +G    G A EA+++AG++ D+N++V+LND+  S+ P     
Sbjct: 126 ALARDAKGENFKVVSIIGDGALTGGMALEAINHAGHIPDTNLMVVLNDNEMSISP----- 180

Query: 264 PKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRI---GRGMHEWAAKVDEYARGMIGPQ 320
              ++ A+S  L++++ S   + L +  +   K +   G  +     ++ E  + +  P+
Sbjct: 181 ---NVGAISRYLNKVRLSPPMQFLTDNLEEQFKHLPFFGESLTPEMERMKEGMKRLAVPK 237

Query: 321 GSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSEA 380
              + EELG  Y GP+DGHN+ +LI   Q+   +   GPVLVHV T + +     +K + 
Sbjct: 238 VGAVIEELGFKYFGPIDGHNLTELIHTFQQAHQV--PGPVLVHVATTKGKGYSIAEKDQV 295

Query: 381 IEKQQE------GASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
               Q       G +  +S P       Y   F   L   AE +  I+ + A M     L
Sbjct: 296 GYHAQSAFNIATGKAQPSSKP---KPPKYCKVFAHTLTQLAENNPKIIGITAAMATGTGL 352

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
              Q+K P++Y DVG+AEQHAVT +AGLAC G++P   I S FLQRAYDQ+++DV  Q L
Sbjct: 353 DKLQQKLPDQYVDVGIAEQHAVTLAAGLACEGMRPVAAIYSTFLQRAYDQIIHDVCIQNL 412

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PV F +  AG+VG+DGPT  G +DI ++ CLPNM++MAP DE EL  M  T  +  D P+
Sbjct: 413 PVFFCLDRAGIVGADGPTHQGMYDIAYLRCLPNMVIMAPKDEAELQRMTVTGVNYTDGPI 472

Query: 555 CFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGI 614
             RYPRG  +   L      P+EIGKG++L  G DV +LGYGAMV   L+A  +LS+ GI
Sbjct: 473 AMRYPRGNGIGVPLMEEGWDPVEIGKGEILRNGDDVLVLGYGAMVPTALQAAEILSEHGI 532

Query: 615 DVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVKW 673
           + TV +ARF KPLD +L+  L +    ++T+EEG + GGFGS V+       LL   V  
Sbjct: 533 EATVVNARFVKPLDTELIFPLAKQIGRVVTLEEGCLMGGFGSAVTEAFMDHNLL---VPV 589

Query: 674 RPIVLPDNYIEHASPTQQLALAGLTGHHIAATALS 708
           +   +PD  ++HA P +  A  GL+   IA   L+
Sbjct: 590 KRFGVPDQLVDHAKPEEAKADLGLSSSQIAEQVLA 624


>gi|344199834|ref|YP_004784160.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidithiobacillus
           ferrivorans SS3]
 gi|343775278|gb|AEM47834.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidithiobacillus
           ferrivorans SS3]
          Length = 624

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 272/650 (41%), Positives = 375/650 (57%), Gaps = 50/650 (7%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L  +  P  L+ ++  E K +A  +R  L   VS+T   L S L AVELTVALH VF+ 
Sbjct: 4   LLKDIPMPAELRQMSRSEQKGVAKMVRQFLLETVSQTGGHLSSCLGAVELTVALHAVFNT 63

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+++WDVG Q Y HKILTGR  L   LR KDG+SG+  R ES YD F AGH   S+SA
Sbjct: 64  PEDRLIWDVGHQAYPHKILTGRGPLFPRLRIKDGLSGFLKRDESPYDSFGAGHSSTSISA 123

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKI 260
            LGMAVA  +  K   +V +I +G   AG AYEA++N G LD+N++VILND+  S+ P  
Sbjct: 124 ALGMAVAAKLGHKSREVVAIIGDGAMTAGLAYEALNNGGVLDANLLVILNDNEMSISP-- 181

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQ 320
                 ++ A+S  L+RI S + +  +RE A G        + E A K +E  +G++ P 
Sbjct: 182 ------NVGAVSQYLTRILSGRLYNTVREGA-GQALSFVPPLRELAKKAEEGVKGLVAP- 233

Query: 321 GSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR----RAEDTQ 376
             TLFEE+G +Y GP+DGH+++ LI  L+ +  +   GP L+HV+T++ +      +D  
Sbjct: 234 -GTLFEEMGFHYFGPIDGHDLDTLIQTLENLKKI--RGPRLLHVITKKGKGYGPAEQDPC 290

Query: 377 KSEAIE--KQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
               +    Q +G     S    +Y++ + D   +    +   +K +V +   M     L
Sbjct: 291 GYHGVTPFNQTDGKMAKKSAGAASYTQVFGDWLCD----KGAAEKQLVAITPAMREGSGL 346

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F + FPERYFDVG+AEQHAVTF+AGLAC G+ P   I S FLQRAYDQ+++DV  Q L
Sbjct: 347 VRFAQLFPERYFDVGIAEQHAVTFAAGLACDGIHPVVAIYSTFLQRAYDQLLHDVAIQNL 406

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PV F I  AGLVG+DG T  GAFD+ +  C+PN+++MAP DE E+ DM+ T  +    P 
Sbjct: 407 PVLFAIDRAGLVGADGATHQGAFDMAYARCIPNLVIMAPKDEQEMRDMLNTGFAYQG-PA 465

Query: 555 CFRYPRGA----IVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLS 610
             RYPRG      +  DL   R IP  IG+ +VL EGK++A+L +G      + A A L 
Sbjct: 466 LVRYPRGNGRGLALDKDLS--RQIP--IGRAEVLREGKELAILAFGTRAAAAMVAGAAL- 520

Query: 611 KLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-IGGFGSHVSHFIALDGLLDS 669
               D TV + RF KPLD +L+  L Q+H   +TVEEGS +GG GS V+ F     LL+ 
Sbjct: 521 ----DATVVNMRFVKPLDTELLTSLAQSHRAFLTVEEGSRMGGAGSAVAEF-----LLNE 571

Query: 670 GVKWRPIVL---PDNYIEHASPTQQLALAGLTGHHIAATA---LSLLGRT 713
           GV  RP+ L   PD +IE    +Q LA  GL    I  +    L+LL R+
Sbjct: 572 GV-VRPLRLLGFPDTFIEQGDASQWLADLGLDAAGIEKSGGELLALLARS 620


>gi|387769442|ref|ZP_10125705.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pasteurella bettyae CCUG
           2042]
 gi|386906751|gb|EIJ71476.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pasteurella bettyae CCUG
           2042]
          Length = 617

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 255/616 (41%), Positives = 363/616 (58%), Gaps = 25/616 (4%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+L L+ +P  L+ L  ++L Q+  E+R  L   VS+T   L S L  VELTVALH+VF 
Sbjct: 5   PLLSLINSPDDLRLLNKEQLPQVCNELREYLLESVSQTSGHLASGLGTVELTVALHYVFK 64

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG Q Y HKILTGRR  + T+R+K+GI  +  R ESE+D  + GH   S+S
Sbjct: 65  TPFDQLIWDVGHQAYPHKILTGRRDRMSTIRQKNGIHPFPWREESEFDVLSVGHSSTSIS 124

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           AGLG+A+A + +      V VI +G   AG A+EAM++AG L ++M+VILND+  S+   
Sbjct: 125 AGLGIAIAAEKENAGRKTVCVIGDGAITAGMAFEAMNHAGALHTDMLVILNDNEMSI--- 181

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                  ++ AL++ L+RI S   +  LR+ +K +   I   +  +  K +E+ +G+I P
Sbjct: 182 -----SENVGALNNHLARIFSGTLYSSLRDGSKKILDNI-PPIKNFMKKTEEHVKGVISP 235

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             STLFEELG  YIGP+DGHNIE+LI+ L  + +L   GP  +H+ T++ +  +  ++  
Sbjct: 236 V-STLFEELGFNYIGPIDGHNIEELIATLGNMRTL--KGPQFLHIRTKKGKGYQPAEQDP 292

Query: 380 -AIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQ 438
                  +    +  LP  N   TY   F + L   AE +  ++ +   M     +  F 
Sbjct: 293 IGFHGVPKFDYHTGELPKSNAKPTYSQVFGQWLCETAEHNPKLMAITPAMREGSGMVEFS 352

Query: 439 EKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRF 498
            +FPE+YFDV +AEQHAVT +AGLA GG KP   I S FLQRAYDQV++DV  Q LPV F
Sbjct: 353 NRFPEQYFDVAIAEQHAVTLAAGLAIGGYKPVVAIYSTFLQRAYDQVIHDVAIQNLPVLF 412

Query: 499 VITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRY 558
            I  AG+VG+DGPT  GAFDI+FM C+PN+++M PSDE+E   M+ T      +P   RY
Sbjct: 413 AIDRAGIVGADGPTHQGAFDISFMRCIPNLVIMTPSDENECRLMLHTGYHC-GKPAAVRY 471

Query: 559 PRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTV 618
           PRG  +  +L       +EIGK K + EGK +A+L +G ++ + L   A+  KL  + TV
Sbjct: 472 PRGNAIGVELESLH--ELEIGKSKTIREGKKIAILNFGTLLPDAL---AVAEKL--NATV 524

Query: 619 ADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVKWRPIV 677
            D RF KPLD   + EL Q H  L+T+EE +I GG GS VS  + +       V    + 
Sbjct: 525 VDMRFVKPLDTTRINELAQTHDTLVTLEENAIQGGAGSAVSEILNIQ---QHKVNVLHLG 581

Query: 678 LPDNYIEHASPTQQLA 693
           LPD +I   +  + LA
Sbjct: 582 LPDQFISQGTQPEVLA 597


>gi|145638944|ref|ZP_01794552.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           PittII]
 gi|145271916|gb|EDK11825.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           PittII]
 gi|309750913|gb|ADO80897.1| 1-deoxyxylulose-5-phosphate synthase [Haemophilus influenzae R2866]
          Length = 625

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 259/639 (40%), Positives = 375/639 (58%), Gaps = 32/639 (5%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+L L+ +P  L+ L   +L QL  E+R+ L   VS+T   L S L  VELTVALH+V+ 
Sbjct: 9   PLLSLINSPEDLRLLNKDQLPQLCQELRAYLLESVSQTSGHLASGLGTVELTVALHYVYK 68

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG Q Y HKILTGRR  + T+R+KDGI  +  R ESE+D  + GH   S+S
Sbjct: 69  TPFDQLIWDVGHQAYPHKILTGRREQMSTIRQKDGIHPFPWREESEFDVLSVGHSSTSIS 128

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           AGLG+AVA + +      V VI +G   AG A+EA+++AG L ++M+VILND+  S+   
Sbjct: 129 AGLGIAVAAERENAGRKTVCVIGDGAITAGMAFEALNHAGALHTDMLVILNDNEMSI--- 185

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                  ++ AL++ L+RI S   +  LR+ +K +  ++   +  +  K +E+ +G++  
Sbjct: 186 -----SENVGALNNHLARIFSGSLYSTLRDGSKKILDKV-PPIKNFMKKTEEHMKGVMFS 239

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             STLFEELG  YIGPVDGHNI++L++ L  + +L   GP  +H+ T++ +     +K  
Sbjct: 240 PESTLFEELGFNYIGPVDGHNIDELVATLTNMRNL--KGPQFLHIKTKKGKGYAPAEKDP 297

Query: 380 -AIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQ 438
                  +    S  LP  N   TY   F + L   AEKD  I+ +   M     +  F 
Sbjct: 298 IGFHGVPKFDPISGELPKNNSKPTYSKIFGDWLCEMAEKDAKIIGITPAMREGSGMVEFS 357

Query: 439 EKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRF 498
           ++FP++YFDV +AEQHAVTF+ GLA GG KP   I S FLQRAYDQ+++DV  Q LPV F
Sbjct: 358 QRFPKQYFDVAIAEQHAVTFATGLAIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPVLF 417

Query: 499 VITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRY 558
            I  AG+VG+DG T  GAFDI+F+ C+PNMI+M PSDE+E   M+ T      +P   RY
Sbjct: 418 AIDRAGIVGADGATHQGAFDISFIRCIPNMIIMTPSDENECRQMLYTGYQC-GKPAAVRY 476

Query: 559 PRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTV 618
           PRG  V   L     +P  IGK +++ +G+ +A+L +G ++ + L+   L  KL  + TV
Sbjct: 477 PRGNAVGVKLTPLEMLP--IGKSRLIRKGQKIAILNFGTLLPSALE---LSEKL--NATV 529

Query: 619 ADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG----LLDSGVKW 673
            D RF KP+DI+++  L Q H +L+T+EE +I GG GS V+  +   G    LL  G   
Sbjct: 530 VDMRFVKPIDIEMINVLAQTHDYLVTLEENAIQGGAGSAVAEVLNSSGKSTALLQLG--- 586

Query: 674 RPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
               LPD +I  A+  + LA  GL    I    L+ + +
Sbjct: 587 ----LPDYFIPQATQQEALADLGLDTKGIEEKILNFIAK 621


>gi|387121992|ref|YP_006287875.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|415756050|ref|ZP_11480960.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           actinomycetemcomitans D17P-3]
 gi|416038199|ref|ZP_11574059.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           actinomycetemcomitans serotype a str. H5P1]
 gi|416048347|ref|ZP_11576288.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           actinomycetemcomitans serotype d str. I63B]
 gi|416068223|ref|ZP_11582702.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           actinomycetemcomitans serotype f str. D18P1]
 gi|429732220|ref|ZP_19266838.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           actinomycetemcomitans Y4]
 gi|347993222|gb|EGY34598.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           actinomycetemcomitans serotype d str. I63B]
 gi|347995141|gb|EGY36352.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           actinomycetemcomitans serotype a str. H5P1]
 gi|348001257|gb|EGY42008.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           actinomycetemcomitans serotype f str. D18P1]
 gi|348655888|gb|EGY71314.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           actinomycetemcomitans D17P-3]
 gi|385876484|gb|AFI88043.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|429156847|gb|EKX99467.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           actinomycetemcomitans Y4]
          Length = 616

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 253/635 (39%), Positives = 374/635 (58%), Gaps = 26/635 (4%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+L L+ +P  L+ L  ++L Q+  E+R  L   VS++   L S L  VELTVALH+VF 
Sbjct: 5   PLLSLINSPEDLRLLNKEQLPQVCYELREYLLESVSQSSGHLASGLGTVELTVALHYVFK 64

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG Q Y HKILTGRR  + T+R+K G+  +  R ESE+D  + GH   S+S
Sbjct: 65  TPFDQLIWDVGHQAYPHKILTGRRDQMPTIRQKGGLHPFPWRGESEFDVLSVGHSSTSIS 124

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           AGLG+A+A + +      V VI +G   AG A+EA+++AG L ++M+VILND+  S+   
Sbjct: 125 AGLGIAIAAERENAGRKTVCVIGDGAITAGMAFEALNHAGSLHTDMLVILNDNEMSI--- 181

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                  ++ AL++ L+R+ S   +  +RE  K +   +   + E+  K +E+ +G++ P
Sbjct: 182 -----SENVGALNNHLARLLSGSFYSSIREGGKKILSGV-PPIKEFVKKTEEHVKGLVSP 235

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
            GST+FEELG  YIGP+DGHN+E+LIS LQ ++SL   GP  +H+VT++ +     +K  
Sbjct: 236 -GSTMFEELGFNYIGPIDGHNVEELISTLQNMSSL--KGPQFLHIVTKKGKGYTPAEKDP 292

Query: 380 -AIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQ 438
                  +    S  LP  N + TY   F + L   AE+D  ++ +   M     +  F 
Sbjct: 293 IGFHGVPKFNHLSGELPKSNATPTYSKIFGDWLCEIAEQDPKLIGITPAMREGSGMVEFS 352

Query: 439 EKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRF 498
           ++FP++YFDV +AEQHAVTF+AGLA GG KP   I S FLQRAYDQ+++DV  Q LPV F
Sbjct: 353 QRFPQQYFDVAIAEQHAVTFAAGLAIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPVLF 412

Query: 499 VITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRY 558
            I  AG+VG+DG T  GAFDI+FM C+PN+++M PSDE+E   M+ T      +P   RY
Sbjct: 413 AIDRAGIVGADGQTHQGAFDISFMRCIPNLVIMTPSDENECRQMLYTGYHC-GKPAAVRY 471

Query: 559 PRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTV 618
           PRG  V  +L   +  P+E+GK K++ EGK +A+L +G ++ N L+    L     + TV
Sbjct: 472 PRGNAVGVELEPLQ--PLELGKSKLIREGKKIAILNFGTLLPNALQVAEKL-----NATV 524

Query: 619 ADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVKWRPIV 677
            D RF KPLD   +  + + H  ++T+EE ++ GG GS V+  +         VK   + 
Sbjct: 525 IDMRFVKPLDAARINAVAK-HELIVTLEENALQGGAGSAVAEVLNHQ---QHQVKLLQLG 580

Query: 678 LPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
           LPD +I   + ++ L    L    I    L+ LG 
Sbjct: 581 LPDFFIPQGTQSEMLTELKLDAAGIEWQILNYLGE 615


>gi|261867965|ref|YP_003255887.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|365967756|ref|YP_004949318.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           actinomycetemcomitans ANH9381]
 gi|415768813|ref|ZP_11483967.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           actinomycetemcomitans D17P-2]
 gi|416077118|ref|ZP_11585742.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           actinomycetemcomitans serotype b str. SCC1398]
 gi|444346553|ref|ZP_21154517.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           actinomycetemcomitans serotype c str. AAS4A]
 gi|261413297|gb|ACX82668.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|348004255|gb|EGY44778.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           actinomycetemcomitans serotype b str. SCC1398]
 gi|348657659|gb|EGY75245.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           actinomycetemcomitans D17P-2]
 gi|365746669|gb|AEW77574.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           actinomycetemcomitans ANH9381]
 gi|443541371|gb|ELT51798.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           actinomycetemcomitans serotype c str. AAS4A]
          Length = 616

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 254/635 (40%), Positives = 373/635 (58%), Gaps = 26/635 (4%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+L L+ +P  L+ L  ++L Q+  E+R  L   VS++   L S L  VELTVALH+VF 
Sbjct: 5   PLLSLINSPEDLRLLNKEQLPQVCQELREYLLESVSQSSGHLASGLGTVELTVALHYVFK 64

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG Q Y HKILTGRR  + T+R+K G+  +  R ESE+D  + GH   S+S
Sbjct: 65  TPFDQLIWDVGHQAYPHKILTGRRDQMPTIRQKGGLHPFPWRGESEFDVLSVGHSSTSIS 124

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           AGLG+A+A + +      V VI +G   AG A+EA+++AG L ++M+VILND+  S+   
Sbjct: 125 AGLGIAIAAERENAGRKTVCVIGDGAITAGMAFEALNHAGSLHTDMLVILNDNEMSI--- 181

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                  ++ AL++ L+R+ S   +  LRE  K +   +   + E+  K +E+ +G + P
Sbjct: 182 -----SENVGALNNHLARLLSGSFYSSLREGGKKILSGV-PPIKEFVKKTEEHVKGFVSP 235

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
            GST+FEELG  YIGP+DGHN+E+LIS LQ ++SL   GP  +H+VT++ +     +K  
Sbjct: 236 -GSTMFEELGFNYIGPIDGHNVEELISTLQNMSSL--KGPQFLHIVTKKGKGYTPAEKDP 292

Query: 380 -AIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQ 438
                  +    S  LP  N + TY   F + L   AE+D  ++ +   M     +  F 
Sbjct: 293 IGFHGVPKFNHLSGELPKSNATPTYSKIFGDWLCEIAEQDPKLIGITPAMREGSGMVEFS 352

Query: 439 EKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRF 498
           ++FP++YFDV +AEQHAVTF+AGLA GG KP   I S FLQRAYDQ+++DV  Q LPV F
Sbjct: 353 QRFPQQYFDVAIAEQHAVTFAAGLAIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPVLF 412

Query: 499 VITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRY 558
            I  AG+VG+DG T  GAFDI+FM C+PN+++M PSDE+E   M+ T      +P   RY
Sbjct: 413 AIDRAGIVGADGQTHQGAFDISFMRCIPNLVIMTPSDENECRQMLYTGYHC-GKPAAVRY 471

Query: 559 PRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTV 618
           PRG  V  +L   +  P+E+GK K++ EGK +A+L +G ++ N L+    L     + TV
Sbjct: 472 PRGNAVGVELEPLQ--PLELGKSKLIREGKKIAILNFGTLLPNALQVAEKL-----NATV 524

Query: 619 ADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVKWRPIV 677
            D RF KPLD   +  + + H  ++T+EE ++ GG GS V+  +         VK   + 
Sbjct: 525 IDMRFVKPLDAARINAVAK-HELIVTLEENALQGGAGSAVAEVLNHQ---QHQVKLLQLG 580

Query: 678 LPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
           LPD +I   + ++ L    L    I    L+ LG 
Sbjct: 581 LPDFFIPQGTQSEMLTELKLDAAGIEWQILNYLGE 615


>gi|428219388|ref|YP_007103853.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudanabaena sp. PCC
           7367]
 gi|427991170|gb|AFY71425.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudanabaena sp. PCC
           7367]
          Length = 639

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 250/638 (39%), Positives = 370/638 (57%), Gaps = 28/638 (4%)

Query: 85  VENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDK 144
           + +P +L  LT+ EL+ +A EIR +    ++ T   L   L  VELT+ L+       DK
Sbjct: 6   IVHPNQLHGLTVAELESIAQEIREKHLQTIAATGGHLGPGLGVVELTLGLYQTLDLDRDK 65

Query: 145 ILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGM 204
           ++WDVG Q Y HK++TGR    HTLR+KDG++GY  R+ES +D F AGH   S+SAGLGM
Sbjct: 66  VIWDVGHQAYPHKMITGRYEQFHTLRQKDGVAGYLKRTESPFDHFGAGHASTSISAGLGM 125

Query: 205 AVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPKIEES 263
           A+ARD  G    +  +I +G    G A EA+++AG+L  +N++VILND+  S+ P     
Sbjct: 126 AMARDAMGDDYKVAAIIGDGALTGGMALEAINHAGHLPKTNLLVILNDNEMSISP----- 180

Query: 264 PKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRI---GRGMHEWAAKVDEYAR--GMIG 318
              ++ A+   L+R++ S+  + + E  +   + +   G  +     ++ +  +   M+ 
Sbjct: 181 ---NVGAIPRYLNRLRLSEPIQSISENLEDQIRNLPFLGGSISPEIERLRDNFKIVTMLQ 237

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
            +   + EELG  YIGP+DGHN+++LI       +L   GPV+VHV T + +  +  +  
Sbjct: 238 NKVGAIIEELGFKYIGPIDGHNVKELIDTFTMAHTL--KGPVMVHVSTTKGKGYKYAEVD 295

Query: 379 EAIEKQQEG--ASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQL 436
           +     Q     +   + P       Y   F++ L+  AE DK I+ + A M     L  
Sbjct: 296 KVAYHAQNAFDIATGKATPSKPKPPKYSKVFVDTLIKLAEHDKRIIGITAAMATGTGLDK 355

Query: 437 FQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPV 496
            Q KFP++Y DVG+AEQHA+T +AG+AC G++P   I S FLQRAYDQ+++DV  Q+LPV
Sbjct: 356 LQTKFPDQYVDVGIAEQHAITLAAGMACEGVRPIAAIYSTFLQRAYDQIIHDVCIQKLPV 415

Query: 497 RFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCF 556
            F +  AG+VG+DGPT  G +DI ++ C+PNM++MAP DE EL  M+ T  +  D P+  
Sbjct: 416 FFCLDRAGIVGADGPTHQGMYDIAYLRCIPNMVMMAPKDEAELQQMLVTGINYTDGPIAM 475

Query: 557 RYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDV 616
           RYPRG  +   L      P+ IGKG+VL EG DV L+ YG MV   ++A  LL + G++ 
Sbjct: 476 RYPRGNGIGVPLQEEGWQPLPIGKGEVLREGDDVLLVAYGTMVNTAMQAAELLVEHGMEA 535

Query: 617 TVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVKWRP 675
           TV +ARF KP+D++L+  L Q    + T+EEG I GGFGS V     L+GL+D G+   P
Sbjct: 536 TVVNARFAKPIDLELIAPLAQKIGHVFTLEEGCIMGGFGSGV-----LEGLMDMGIML-P 589

Query: 676 IV---LPDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
           I    +PD  ++HASP +  A  GLT   I    L+ L
Sbjct: 590 ITRLGVPDILVDHASPDEAKAGLGLTSGQIKDRILTQL 627


>gi|381160392|ref|ZP_09869624.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thiorhodovibrio sp. 970]
 gi|380878456|gb|EIC20548.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thiorhodovibrio sp. 970]
          Length = 642

 Score =  447 bits (1150), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 267/638 (41%), Positives = 385/638 (60%), Gaps = 39/638 (6%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+L+ +++P  L+S++ ++LK+LA E+R+ L   VS+T   L + L  VELTVA+HHVF 
Sbjct: 15  PLLEQIQDPADLRSMSSEQLKELAAELRAFLIDSVSRTGGHLAAGLGVVELTVAIHHVFD 74

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG Q Y HKILTGRR  +H +R K G+SG+  RSES YD F  GH   S+S
Sbjct: 75  TPHDRLVWDVGHQAYPHKILTGRRDRMHRMRMKGGLSGFPKRSESRYDTFGVGHSSTSIS 134

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           A LGM++A  +KG++  ++ VI +G+  AG A+EA+++ G LD +++VILND+  S+ P 
Sbjct: 135 AALGMSIAARVKGEQRQVIAVIGDGSLGAGMAFEALNHGGPLDPDLLVILNDNEMSISPP 194

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                   + A+S  LSR+ SS+ +  +RE +K   + +    H    + +E+ +GM+ P
Sbjct: 195 --------VGAISRHLSRLLSSRVYTSVREGSKTALRSMPHLRH-LVGRWEEHMKGMVMP 245

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             ST+FEE+G  YIGP+DGH+++DL++ L  + ++   GP  +HV T++ R  E    +E
Sbjct: 246 --STMFEEMGFNYIGPIDGHDMDDLVATLNNMKAM--PGPRFLHVSTQKGRGYE---PAE 298

Query: 380 AIEKQQEGA----SDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQ 435
               Q  G     S +  +      +TY   F + L   AEK+  ++ +   M     + 
Sbjct: 299 GQPVQFHGVTPFDSKTGRMHKKAGGKTYTQIFGDWLCEAAEKEPRLLAITPAMREGSGMV 358

Query: 436 LFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLP 495
            F E+FPERYFDVG+AEQHAVT +AG+AC G+KP   I S FLQRAYDQ+V+DV  QRL 
Sbjct: 359 AFSERFPERYFDVGIAEQHAVTLAAGMACEGMKPVVAIYSTFLQRAYDQLVHDVCLQRLD 418

Query: 496 VRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVC 555
           V F +  AGLVG+DG T  G+FD+++   LPN+++MAP+DE+E   M+ T A     P  
Sbjct: 419 VTFAVDRAGLVGADGATHAGSFDLSYGRPLPNLVIMAPADENECRRMLQT-ALEHPGPAM 477

Query: 556 FRYPRGAIVRTDLPGYRGIP----IEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSK 611
            RYPRG       PG    P    + IG+G++L +G+ VALLG+G+ V     A AL   
Sbjct: 478 VRYPRGCG-----PGVEIDPSAPVLAIGEGEILRQGEHVALLGFGSRV-----APALEVG 527

Query: 612 LGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSG 670
             I+ TVA+ RF KPLD +L+ EL   H  LIT+EE  I GG GS VS  ++  GL    
Sbjct: 528 EEINATVANMRFVKPLDERLILELADQHQLLITIEENVIAGGAGSAVSELLSAHGL---A 584

Query: 671 VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALS 708
           V+   + LPD   E AS  +QL + GL    I    LS
Sbjct: 585 VRCVHLGLPDVCQEQASHGEQLHVCGLDAPGIRDAVLS 622


>gi|390949923|ref|YP_006413682.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thiocystis violascens DSM
           198]
 gi|390426492|gb|AFL73557.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thiocystis violascens DSM
           198]
          Length = 650

 Score =  447 bits (1150), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 260/641 (40%), Positives = 378/641 (58%), Gaps = 52/641 (8%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +LD +++P+ L++L+  +L ++A E+R  L   VS+T   L + L  VELT+ LH+VF  
Sbjct: 18  LLDAIDSPVDLRALSQSQLPEVASELRGFLVECVSRTGGHLAAGLGVVELTIGLHYVFDT 77

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+++WDVG Q Y HKILTGRR  +  LR+K G SG+  RSES YD F  GH   S+SA
Sbjct: 78  PRDRLVWDVGHQAYPHKILTGRREQMSCLRQKGGPSGFPKRSESAYDTFGVGHSSTSISA 137

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKI 260
            LGMA+A   +G+R  +V VI +G   AG A+EA+++AG +D +++VILND+  S+ P  
Sbjct: 138 ALGMALAAKQRGERRTVVAVIGDGALGAGMAFEALNHAGSMDIDLVVILNDNEMSISPP- 196

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQ 320
                  + A+S+ L+R+ S K +  +RE +K     +    H    + +E+ +GM+ P 
Sbjct: 197 -------VGAISNHLARLLSGKLYTSVREGSKTALAGLPHLRH-LVGRWEEHMKGMVMP- 247

Query: 321 GSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSEA 380
            STLFEELG  YIGP+DGH+++ +I  L+ V   G  G  L+HVVT +    E  +    
Sbjct: 248 -STLFEELGFNYIGPIDGHDLDSVIKTLRNVK--GMPGQRLLHVVTHKGHGYEPAEGQPT 304

Query: 381 -----------IEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGME 429
                        + ++G S+  S     Y++ + D   +A    AE+D  +V +   M 
Sbjct: 305 TYHGVTPFDRRTGELRKGKSNGPS-----YTQIFGDWLCDA----AEQDPRLVGITPAMC 355

Query: 430 MDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDV 489
               L  F ++FP+R+FDVG+AEQHAVT +AG+AC GLKP   I S+FLQRAYDQ ++DV
Sbjct: 356 EGSGLTAFAKRFPDRFFDVGIAEQHAVTLAAGMACEGLKPVVAIYSSFLQRAYDQFIHDV 415

Query: 490 DQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASI 549
             Q L V F +   GLVG DG T  G+FD++F   +P +I++APS+E+E   M+ T    
Sbjct: 416 CLQDLDVTFAVDRGGLVGPDGATHAGSFDLSFCRPIPKLIILAPSNENECRRMLRTAYEY 475

Query: 550 DDRPVCFRYPR----GAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKA 605
           +  P   RYPR    G ++  D P +      IG+G+V+  G+ VALL +G+MV   L+A
Sbjct: 476 EG-PAMVRYPRGCGPGVVIDPDAPVF-----PIGRGEVIRRGRRVALLAFGSMVTPALEA 529

Query: 606 RALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALD 664
                 + +D TVA+ RF KPLD  L+ EL Q H  L+T+EE +I GG GS VS  ++  
Sbjct: 530 -----AVSLDATVANMRFVKPLDESLILELAQGHDLLVTIEENAIAGGAGSAVSESLSAR 584

Query: 665 GLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAAT 705
           GL    V+   + LPD YIEHA   +QLA+ GL    I A+
Sbjct: 585 GL---AVRCLHLGLPDRYIEHAEHAEQLAICGLDAAGIVAS 622


>gi|206900898|ref|YP_002250764.1| 1-deoxy-D-xylulose-5-phosphate synthase [Dictyoglomus thermophilum
           H-6-12]
 gi|226801556|sp|B5YE06.1|DXS_DICT6 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|206740001|gb|ACI19059.1| 1-deoxy-D-xylulose-5-phosphate synthase [Dictyoglomus thermophilum
           H-6-12]
          Length = 618

 Score =  447 bits (1150), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 253/641 (39%), Positives = 377/641 (58%), Gaps = 40/641 (6%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L  + +P  LK L+I ELK L+ EIR  + + V      L S+L  VELT+ALH+VF  
Sbjct: 2   LLQKINSPKDLKRLSIDELKTLSAEIREIIINTVENNGGHLASNLGTVELTLALHYVFDT 61

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P DKI+WDVG Q Y HK++TGR    HTLR+  GISGY +  ESEYD F  GH   S+SA
Sbjct: 62  PEDKIIWDVGHQAYTHKLVTGRAKDFHTLRQFGGISGYIAPWESEYDHFAVGHAGTSLSA 121

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKI 260
            LG A ARD+KG++  ++ VI +G   +G A EA++  GYL++++IV+LND+ HS+ P  
Sbjct: 122 ALGFAKARDLKGEKYKVIAVIGDGALTSGMALEALNQIGYLNTDLIVVLNDNEHSISP-- 179

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKR--IGRGMHEWAAKVDEYARGMIG 318
                 ++ A++  L++++    +R  ++  + + K   IG+G+  +  K++   + ++ 
Sbjct: 180 ------NVGAIALYLAKLRKHPLYRFFKQTTQNLLKNSSIGKGLLAFDLKLERSLKSLL- 232

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
              + +FE  G  Y GP DGH+I  LISV + +    S  PVL+H+ T++    +D + +
Sbjct: 233 -LENPMFEYWGFKYFGPFDGHDIPVLISVFKGIKDNLSC-PVLIHITTKKGIGHKDAEAT 290

Query: 379 EA--------IEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
            +        IE++++       +P      TY + F +ALV   EK  +IV + A M  
Sbjct: 291 PSKFHSIGAKIEREKK-------VP------TYTEVFGKALVELGEKYPEIVAITAAMPE 337

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L  F ++FPER+FDVG+AE+HAVTF+AGLA  GLKP   I S FLQRA+DQ+++DV 
Sbjct: 338 GTGLSYFAQRFPERFFDVGIAEEHAVTFAAGLAKNGLKPVVAIYSTFLQRAFDQIIHDVC 397

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q+LP+ FV+  AG+V  DGPT  G FD++++  +PNM++ AP DE EL D++ T  +  
Sbjct: 398 LQKLPIVFVLDRAGIVSDDGPTHQGIFDLSYLRLIPNMVISAPKDESELRDLLYTAINYP 457

Query: 551 DRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLS 610
             P   RYP+   V   L  +    IEIGK ++L  GK+V +L  G+MV   L+A ++L 
Sbjct: 458 G-PFAIRYPKSKGVGIGLKDHFE-RIEIGKSEILKYGKNVLILAIGSMVYPALEAESILK 515

Query: 611 KLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDS 669
             GI  T+ + RF KPLD+  + EL  +H  +ITVEE  I GG    +S  +    +L  
Sbjct: 516 TEGISPTIVNVRFLKPLDVLTLEELISSHDVIITVEENVITGGLFGAISELV---NILKL 572

Query: 670 GVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
             K  PI LPD +IE  +      + GL+GH IA   +S+L
Sbjct: 573 NKKVLPISLPDKFIEQGNAQLLRDIYGLSGHKIAEKIISVL 613


>gi|428775720|ref|YP_007167507.1| 1-deoxy-D-xylulose-5-phosphate synthase [Halothece sp. PCC 7418]
 gi|428689999|gb|AFZ43293.1| 1-deoxy-D-xylulose-5-phosphate synthase [Halothece sp. PCC 7418]
          Length = 638

 Score =  447 bits (1150), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 253/635 (39%), Positives = 363/635 (57%), Gaps = 27/635 (4%)

Query: 85  VENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDK 144
           + +P +L  L+I+EL+ +A +IR +    VS +   L   L  VELT+ L+       DK
Sbjct: 6   ITHPNQLHGLSIRELETIARQIREKHLETVSTSGGHLGPGLGVVELTLGLYQTLDLDRDK 65

Query: 145 ILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGM 204
           ++WDVG Q Y HK++TGR    HTLR+KDGI+GY  R ES +D F AGH   S+SAGLGM
Sbjct: 66  VIWDVGHQAYPHKMITGRYHNFHTLRQKDGIAGYLKRCESPFDHFGAGHASTSISAGLGM 125

Query: 205 AVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPKIEES 263
           A+ARD KG+   +V+VI +G    G A EA+++AG+L  +N++V+LND+  S+ P     
Sbjct: 126 ALARDAKGEEFKVVSVIGDGALTGGMALEAINHAGHLPKTNLMVVLNDNEMSISP----- 180

Query: 264 PKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRI---GRGMHEWAAKVDEYARGMIGPQ 320
              ++ A+S  L++++ S   + L +  +   K +   G  +     +V E  + +  P+
Sbjct: 181 ---NVGAISRYLNKVRLSPPMQFLSDNLEEQFKHLPFFGESLTPEMERVKEGMKRLAVPK 237

Query: 321 GSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSEA 380
              + EELG  Y GP+DGHN+ +LI   ++   +   GPVLVHV T + +     +K + 
Sbjct: 238 VGAVIEELGFKYFGPIDGHNLSELIHTFRQAEQV--TGPVLVHVATTKGKGYAIAEKDQV 295

Query: 381 IEKQQE------GASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
               Q       G +  +S P       Y   F   L   AE +  I+ + A M     L
Sbjct: 296 GYHAQSAFNIATGKAQPSSKP---KPPKYCKVFAHTLTKLAESNPKIIGITAAMATGTGL 352

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
              Q+K P++Y DVG+AEQHAVT +AGLAC G++P   I S FLQRAYDQ+++DV  Q L
Sbjct: 353 DKLQQKLPDQYVDVGIAEQHAVTLAAGLACEGMRPVAAIYSTFLQRAYDQIIHDVCIQNL 412

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PV F +  AG+VG+DGPT  G +DI ++ CLPNM+VMAP DE EL  M  T  +  D  +
Sbjct: 413 PVFFCLDRAGIVGADGPTHQGMYDIAYLRCLPNMVVMAPKDEAELQRMTVTGINYTDGAI 472

Query: 555 CFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGI 614
             RYPRG  +   L      PIEIGKG++L  G D+ LLGYG MV   ++A  +LS+ GI
Sbjct: 473 AMRYPRGNGIGVPLMEEGWEPIEIGKGEILRNGDDILLLGYGTMVSTAMQAAEILSEHGI 532

Query: 615 DVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVKW 673
           + TV ++RF KPLD  L+  L Q    + T+EEG + GGFGS V+     + +L   V  
Sbjct: 533 EATVVNSRFVKPLDTDLIFPLAQKIGRVATLEEGCLMGGFGSAVTEAFMDNNIL---VPV 589

Query: 674 RPIVLPDNYIEHASPTQQLALAGLTGHHIAATALS 708
           +   +PD  ++HA P + +A  GL    IA   LS
Sbjct: 590 KRFGVPDQLVDHAKPEEAIADLGLNSSQIAEQVLS 624


>gi|91776485|ref|YP_546241.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacillus
           flagellatus KT]
 gi|118595589|sp|Q1GZD7.1|DXS_METFK RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|91710472|gb|ABE50400.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacillus
           flagellatus KT]
          Length = 614

 Score =  447 bits (1150), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 254/633 (40%), Positives = 374/633 (59%), Gaps = 39/633 (6%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L+ + +P  L+ L  KEL +LA ++R+ L + V++T   L S+L  VELT+ALH+VF+ 
Sbjct: 4   LLESINSPEDLRRLDRKELHELARQLRAFLINSVAQTGGHLSSNLGVVELTIALHYVFNT 63

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+++WDVG QTY HKILTGRR  +  LR+  GI+G+  R ES YD F  GH   S+SA
Sbjct: 64  PEDRVVWDVGHQTYPHKILTGRRKDMGNLRRPGGIAGFPRRDESIYDTFGTGHSSTSISA 123

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKI 260
            LGMAVA    G     + VI +G   AG A+EA++NAG +D+N++VILND+  S+ P  
Sbjct: 124 ALGMAVAAQKTGSDRHSIAVIGDGAMTAGMAFEALNNAGAMDANILVILNDNDMSISP-- 181

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQ 320
                 ++ AL++ L+++ S   +  +R   + +   +   + E+A + +E+ +GM+ P 
Sbjct: 182 ------NVGALTNYLAKLLSGPLYTTVRRSGEKVLGVV-PPVREFAKRAEEHVKGMVTP- 233

Query: 321 GSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSEA 380
             TLFEE G  YIGP+DGH+I+ LI+ L+ +  L   GP  +H+ T++    +  + +  
Sbjct: 234 -GTLFEEFGFNYIGPIDGHDIDVLITTLRNIREL--KGPQFLHIATQKGHGYQPAEDNPG 290

Query: 381 IEKQQEGASDSNSLPFGNYS-RTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQE 439
                     SN         +TY   F + LV  A +D+ +V +   M     L  F E
Sbjct: 291 KFHGVGKFDPSNGCSIAQAGKKTYTQVFSDWLVDMAARDERLVGITPAMCDGSGLNAFAE 350

Query: 440 KFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFV 499
           +FP+R+FDVG+AEQHA+TF+AG+AC GLKP   I S FLQRAYDQ ++D+  Q LPV F 
Sbjct: 351 QFPDRFFDVGIAEQHALTFAAGMACDGLKPVVAIYSTFLQRAYDQFIHDIALQNLPVMFA 410

Query: 500 ITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYP 559
           I  AGLVG+DGPT  G+FD++++ C+PN+I+MAPSDE+E   M+ T A + D P   RYP
Sbjct: 411 IDRAGLVGADGPTHAGSFDLSYLRCIPNIIIMAPSDENECRQMLYT-AYLHDGPSAVRYP 469

Query: 560 R----GAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGID 615
           R    GA +  D+       + IGKG++  +G  VA+L +G+M+   L+A   L     D
Sbjct: 470 RGGGPGATITRDMQ-----LLPIGKGELRRQGSWVAILAFGSMLAPALEAAETL-----D 519

Query: 616 VTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVKWR 674
            TVA+ RF KPLD  L+ +L  +HT ++TVEE ++ GG G+ V         + +     
Sbjct: 520 ATVANMRFVKPLDANLINQLASSHTLIVTVEENAVMGGAGAAVME------CMQAADIHT 573

Query: 675 PIV---LPDNYIEHASPTQQLALAGLTGHHIAA 704
           P++   LPD +IEH      LA  GL    I A
Sbjct: 574 PVLCLGLPDMFIEHGVHETMLAECGLNAAGIIA 606


>gi|427710111|ref|YP_007052488.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nostoc sp. PCC 7107]
 gi|427362616|gb|AFY45338.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nostoc sp. PCC 7107]
          Length = 635

 Score =  447 bits (1150), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 252/633 (39%), Positives = 374/633 (59%), Gaps = 27/633 (4%)

Query: 82  LDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAP 141
           L  + +P +L  L+I++L+Q+A +IR +    V+ T   L   L  VELT+ L+      
Sbjct: 3   LSEITHPNQLHGLSIRQLQQIARQIRDKHLQTVAATGGHLGPGLGVVELTLGLYQTLDLD 62

Query: 142 VDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAG 201
            DK++WDVG Q Y HK++TGR S  HTLR+KDGI+GY  R ES++D F AGH   S+SA 
Sbjct: 63  RDKVIWDVGHQAYPHKLITGRYSNFHTLRQKDGIAGYLKRGESKFDHFGAGHASTSISAA 122

Query: 202 LGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPKI 260
           LGMA+ARD KG++   V VI +G    G A EA+++AG++  +N++V+LND+  S+ P +
Sbjct: 123 LGMALARDAKGEKFKAVAVIGDGALTGGMALEAINHAGHMPKTNLLVVLNDNEMSISPNV 182

Query: 261 EESPK-TSINALSSTLSRIQSS--KSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMI 317
              P+  +   LS  +  I+ +  + F+Q+  V + ++  +GR        + E  + + 
Sbjct: 183 GAIPRYLNKMRLSPPVQFIKDNFEEQFKQIPFVGESLSPELGR--------IKEGMKRLA 234

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQK 377
            P+   +FEELG  Y+GPVDGHN+E+LI+  Q+   +   GPVLVHV T + +  E  ++
Sbjct: 235 VPKVGAVFEELGFTYMGPVDGHNLEELIATFQQAHQI--QGPVLVHVATIKGKGYEIAEQ 292

Query: 378 SEAIEKQQE--GASDSNSLPFGNYSR--TYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
            +     Q     +   ++P  N  +   Y   F   LV  AE++  I+ + A M     
Sbjct: 293 DQVGYHAQTPFNLTTGKAIP-SNKPKPPAYAKVFAHTLVKLAEQNPKIIGITAAMATGTG 351

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L   Q K P +Y DVG+AEQHAVT +A LA  G++P   I S FLQRAYDQ+++DV  Q 
Sbjct: 352 LDKLQAKLPNQYIDVGIAEQHAVTLAAALASEGMRPVAAIYSTFLQRAYDQIIHDVCIQN 411

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPV F +  AG+VG+DGPT  G +DI ++ C+PN+++MAP DE EL  M+ T  +    P
Sbjct: 412 LPVFFCLDRAGIVGADGPTHQGMYDIAYLRCIPNIVLMAPKDEAELQQMMVTGINHTSSP 471

Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
           +  R+PRG      L      P+EIGKG++L  G DV ++GYG MV   ++   +LS+ G
Sbjct: 472 IAMRFPRGNGHGVPLMEEGWEPLEIGKGEILRNGDDVLIVGYGTMVYPSMQVAEILSEHG 531

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSG-- 670
           I+ TV +ARF KPLD +L+  L +    ++T+EEG + GGFGS V+     + LLD+   
Sbjct: 532 IEATVINARFVKPLDTELILPLAKKIGRVVTLEEGCVMGGFGSAVA-----EALLDADIV 586

Query: 671 VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIA 703
           V  + I +PD  +EHA+P +  A  GLT   IA
Sbjct: 587 VPVKRIGIPDTLVEHATPEESKAELGLTSRQIA 619


>gi|39995792|ref|NP_951743.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter sulfurreducens
           PCA]
 gi|409911234|ref|YP_006889699.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter sulfurreducens
           KN400]
 gi|81703187|sp|Q74FC3.1|DXS1_GEOSL RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase 1; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase 1; Short=DXP
           synthase 1; Short=DXPS 1
 gi|39982556|gb|AAR34016.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter sulfurreducens
           PCA]
 gi|298504800|gb|ADI83523.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter sulfurreducens
           KN400]
          Length = 637

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 254/625 (40%), Positives = 366/625 (58%), Gaps = 37/625 (5%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +LD +  P  LK +   +L  LA EIR+ L   VS+T   L S+L  VEL++ALH+ F +
Sbjct: 4   LLDTITCPADLKKIPRDQLPALAEEIRAFLLETVSRTGGHLASNLGVVELSIALHYCFDS 63

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+ +WDVG Q Y HKILTGRR   HT R+  GISG+  RSES +D F+ GH   S+SA
Sbjct: 64  PTDRFVWDVGHQAYTHKILTGRRDRFHTQRQYGGISGFPKRSESSHDAFDTGHSSTSISA 123

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKI 260
           GLGMA+AR+++G    +V VI +G+   G A+EA++ AG+L  N+IV+LND+  S+ P  
Sbjct: 124 GLGMAMARELRGGSNKVVAVIGDGSMTGGIAFEALNQAGHLKKNLIVVLNDNEMSISP-- 181

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKR---IGRGMHEWAAKVDEYARGMI 317
                 ++ A SS +SR  +   FR+L++  +G+ +    IG+ + ++A + +   +G +
Sbjct: 182 ------NVGAFSSFVSRKLTGSYFRELKKEVQGLLQNIPAIGKDILQFARRAENSLKGFL 235

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRR--AEDT 375
            P    LFE LG  YIGP+ GHN+  L+ V +    L   GPV+VHV+T + +     +T
Sbjct: 236 TP--GMLFEALGFDYIGPIQGHNLPQLLEVFENARGLD--GPVVVHVMTTKGKGYVPAET 291

Query: 376 QKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQ 435
             S          +   +      + +Y   F + L   A +++ IV + A M     L 
Sbjct: 292 NPSAFHGVGPFDVATGKTTGSKPGAASYTGIFGDTLAQLARENEKIVAITAAMPDGTGLT 351

Query: 436 LFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLP 495
            F ++FPER+FDVG+AEQHAVTF+AGLA  G +P   I S FLQRAYDQV +DV  Q LP
Sbjct: 352 GFAKEFPERFFDVGIAEQHAVTFAAGLAAEGFRPVTAIYSTFLQRAYDQVFHDVCLQNLP 411

Query: 496 VRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVC 555
           V F +   G+VG DGPT  G FD++++  LP M +MAP DE+EL  M+ T  S  D P+ 
Sbjct: 412 VVFALDRGGVVGDDGPTHHGVFDLSYLRHLPGMTLMAPKDENELRHMLKTAVS-HDGPIA 470

Query: 556 FRYPRGAIVRTDLPGYRGIP-------IEIGKGKVLVEGKDVALLGYGAMVQNCLKARAL 608
            RYPRGA          GIP       I IG G++L EG DVA++  G  V   L+A   
Sbjct: 471 LRYPRGAGC--------GIPLDQELREIPIGTGEILAEGDDVAIIAIGITVLPALEAART 522

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLL 667
           L++ GI  TV +ARF KPLD +++ +  +    +IT EE ++ GGFGS V   +A +G+ 
Sbjct: 523 LAEKGIRATVINARFVKPLDREMILQAARRTGCIITAEENALQGGFGSAVLELLADEGM- 581

Query: 668 DSGVKWRPIVLPDNYIEHASPTQQL 692
            +GV+ + + +PD ++E   P  QL
Sbjct: 582 -TGVRVKRLGIPDRFVEQG-PQPQL 604


>gi|365085342|ref|ZP_09327158.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidovorax sp. NO-1]
 gi|363417875|gb|EHL24926.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidovorax sp. NO-1]
          Length = 633

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 263/636 (41%), Positives = 379/636 (59%), Gaps = 49/636 (7%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+L  + +P  L+ L+  +LK LA E+R  +   VS+T   L S+L  VELTVALHHVFH
Sbjct: 4   PLLQTINDPADLRQLSRADLKALATELRGFVLESVSQTGGHLSSNLGTVELTVALHHVFH 63

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG QTY HKILTGRR  +HTLR+  GISG+  R+ES YD F   H   S+S
Sbjct: 64  TPEDRLVWDVGHQTYPHKILTGRRDRMHTLRQLGGISGFPQRAESIYDTFGTAHSSTSIS 123

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           A LGMA+A   KG+    V +I +G   AG A+EA++NAG  D N++V+LND+  S+ P 
Sbjct: 124 AALGMALAAKRKGENRHAVAIIGDGAMSAGMAFEALNNAGVADCNLLVVLNDNDMSISP- 182

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGR---GMHEWAAKVDEYARGM 316
                   + AL+  L+++ S     Q    AK M K + R    + E A + ++ A+GM
Sbjct: 183 -------PVGALNRYLAQLMSG----QFYAAAKNMGKTVLRPVPPLLELAKRFEQQAKGM 231

Query: 317 IGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQ 376
           + P  +TLFE+ G  YIGP+DGH+++ LI  L+ + SL   GP  +HVVT++  +     
Sbjct: 232 VVP--ATLFEKFGFNYIGPIDGHDLDSLIPTLENIKSL--KGPQFLHVVTKKG-QGYKLA 286

Query: 377 KSEAIEKQQEGASDSN---SLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
           +++ +     G  D +   + P     +T+   F + L   A +D  +V +   M     
Sbjct: 287 EADPVAYHGPGKFDPSVGLTKPATPPKQTFTQVFGQWLCDMAAQDPRLVGITPAMREGSG 346

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           +  F+++FP+RY+DVG+AEQHAVTF+AG+AC G+KP   I S FLQR YDQ+++DV  Q 
Sbjct: 347 MVEFEKRFPDRYYDVGIAEQHAVTFAAGMACEGVKPVVAIYSTFLQRGYDQLIHDVALQN 406

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPV F +  AGLVG+DG T  GA+DI F+ C+PNM +  P+DE E   ++++ A   D P
Sbjct: 407 LPVVFALDRAGLVGADGATHAGAYDIPFVRCIPNMSMACPADERECRQLLSS-AFEQDHP 465

Query: 554 VCFRYPRGAIVR-TDLPGYRGIPIEIGKGKVLVE--GKD-----VALLGYGAMVQNCLKA 605
           V  RYPRG+      L    G+P   GKG++  E  G D     +A+L +G ++   L+A
Sbjct: 466 VAVRYPRGSGAGVAPLAALEGLP--FGKGEIRRERQGSDPKAPRIAILAFGTLLYPALQA 523

Query: 606 RALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALD 664
              L     D TV + R+ KP+D  L+RE+   H  L+T+EEG+I GG GS V+   AL+
Sbjct: 524 GEAL-----DATVVNMRWAKPIDEALLREVAGRHDALVTLEEGAIMGGAGSAVTE--ALN 576

Query: 665 GLLDSGVKWRPIV---LPDNYIEHASPTQQLALAGL 697
           G+   G+  RP++   LPD +IEH  P + LAL GL
Sbjct: 577 GM---GI-VRPVLQLGLPDVFIEHGDPAKLLALQGL 608


>gi|333924274|ref|YP_004497854.1| 1-deoxy-D-xylulose-5-phosphate synthase [Desulfotomaculum
           carboxydivorans CO-1-SRB]
 gi|333749835|gb|AEF94942.1| 1-deoxy-D-xylulose-5-phosphate synthase [Desulfotomaculum
           carboxydivorans CO-1-SRB]
          Length = 639

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 262/640 (40%), Positives = 380/640 (59%), Gaps = 35/640 (5%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           IL  + +P  L++L  KEL+ LA EIR  L + VS T   L  +L  VELT+A+H VF++
Sbjct: 4   ILKTIYSPQDLQNLDYKELQCLAREIRETLINTVSVTGGHLAPNLGVVELTIAIHRVFNS 63

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
            VD+I+WDVG Q+Y HK+LTGR++   TLR+  G+SG+  R ES +D F+ GH   S+SA
Sbjct: 64  AVDRIIWDVGHQSYVHKLLTGRQAQFSTLRQYGGLSGFPKRDESIHDAFDTGHSSTSISA 123

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKI 260
            LGM +ARD+KG++  +V VI +G+   G A+EA+++AG+L  N+IVILND+  S+ P  
Sbjct: 124 ALGMVLARDLKGEKYSVVAVIGDGSMTGGMAFEALNHAGHLKKNLIVILNDNEMSIAP-- 181

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRG--MHEWAAKVDEYARGMIG 318
                 ++ ALSS LS +++   + + ++    + ++I  G  + +   ++ +  + ++ 
Sbjct: 182 ------NVGALSSYLSSLRTDPKYSRSKDEIAELLQKIPHGPKLLKVVDRLKDSLKYLVV 235

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
           P    LFEELG  Y+GPVDGH+I+ + ++L++  +LG  GPVLVHV+T++ +  E  +K+
Sbjct: 236 P--GMLFEELGFTYLGPVDGHDIKAVTTMLKQAKNLG--GPVLVHVLTKKGKGYEPAEKN 291

Query: 379 EAIEKQQEGASDS-----NSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
             +     G  D        +P      +Y   F + ++  A++D  I+ + A M     
Sbjct: 292 PDL-FHGVGPFDVVTGAIKKIP--GAPPSYTQIFGQTMINLAKQDDKIIGITAAMPSGTG 348

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L  F ++FP RYFDVG+AEQHAVT +AGLA GG +P   I S FLQRAYDQV++DV  Q 
Sbjct: 349 LNKFAQEFPNRYFDVGIAEQHAVTMAAGLAAGGYRPVVAIYSTFLQRAYDQVLHDVCLQN 408

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPV F +  AGLVG DGPT  G FD+ ++  +PNM++MAP DE+EL  M+ T A   + P
Sbjct: 409 LPVTFALDRAGLVGDDGPTHHGVFDLAYLRNIPNMVIMAPKDENELQHMLKT-AVYHNAP 467

Query: 554 VCFRYPRGA----IVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALL 609
              RYPRGA     + + L       I IG+ +VL +G+DV LL  G MV   LKA   L
Sbjct: 468 TAVRYPRGAGEGVAIDSQLQ-----TIPIGQAEVLWDGEDVVLLAIGNMVPEALKAAENL 522

Query: 610 SKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLD 668
              GI   V +AR+ KPLD +L+         L+TVEE  + GGFGS V   +   GL  
Sbjct: 523 RAQGISAAVINARYVKPLDEELILHYAARTGHLVTVEEHVLMGGFGSAVLELLERAGL-- 580

Query: 669 SGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALS 708
           S VK + I +PD ++EH       A  GLT   I  T L+
Sbjct: 581 SEVKVKRIGIPDCFVEHGKQKILRANYGLTAEGIVETVLA 620


>gi|332524232|ref|ZP_08400458.1| deoxyxylulose-5-phosphate synthase [Rubrivivax benzoatilyticus JA2]
 gi|332107567|gb|EGJ08791.1| deoxyxylulose-5-phosphate synthase [Rubrivivax benzoatilyticus JA2]
          Length = 628

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 261/635 (41%), Positives = 377/635 (59%), Gaps = 36/635 (5%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           ILD ++ P  L+ ++  +L  LA E+R  + + VS+T   L S+L  VELTVALH+VF+ 
Sbjct: 4   ILDSIQTPADLRRMSRSDLPGLAREVREFVLNTVSQTGGHLGSNLGTVELTVALHYVFNT 63

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+I+WDVG QTY HK+LTGRR  +HTLR+  GI+G+  R ESEYD F  GH   S+SA
Sbjct: 64  PHDRIVWDVGHQTYPHKVLTGRRERMHTLRQLGGIAGFPRRDESEYDTFATGHSSTSISA 123

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGY----LDSNMIVILNDSRHSL 256
            LGMA+A   KG+    + VI +G+  AG A+EA++NAG     ++++++VILND+  S+
Sbjct: 124 ALGMALAAKQKGEDRKAIAVIGDGSMTAGMAFEALNNAGVPHAGVNADILVILNDNDMSI 183

Query: 257 HPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGM 316
            P         + AL+  L+R+ S   +   RE  KG+ K     + E A + +E+A+GM
Sbjct: 184 SP--------PVGALNKHLARLMSGNFYAAAREGVKGVLK-AAPPLFELARRFEEHAKGM 234

Query: 317 IGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQ 376
           + P   T+FEE G  Y+GP+DGH+++ LI  L+ + +    GP  +HVVT   ++    +
Sbjct: 235 VVP--GTIFEEFGFNYVGPIDGHDLDALIPTLENLRN--KKGPQFLHVVT---KKGYGYK 287

Query: 377 KSEAIEKQQEGASD----SNSLPFGNYSR-TYDDCFIEALVMEAEKDKDIVVVHAGMEMD 431
            +EA   +   AS     +   P  +  + T+   F + L   AE D+ +V +   M   
Sbjct: 288 MAEADPVKYHAASGRFNPAEGFPKSSGGKPTFTQVFGQWLCDMAEADERLVGITPAMREG 347

Query: 432 LSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQ 491
             +  F ++FP RY DVG+AEQHAVTF+AGLAC GLKP   I S FLQRAYDQ+V+DV  
Sbjct: 348 SGMVEFHKRFPRRYHDVGIAEQHAVTFAAGLACEGLKPVVAIYSTFLQRAYDQLVHDVAL 407

Query: 492 QRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDD 551
           Q LPV F +  AG+VG+DGPT  G +DI F+ C+PN  ++APSDE+E    + T A   D
Sbjct: 408 QNLPVVFALDRAGIVGADGPTHAGVYDIAFIRCIPNCALLAPSDENECRQAL-TTAYRRD 466

Query: 552 RPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSK 611
           +PV  RYPRG+    ++    G   E GKG V  EG+ +A+L +G ++   L A     K
Sbjct: 467 QPVAVRYPRGSGCGAEIETGLG-EWEWGKGVVRREGQRIAILAFGTLLHPALAA---AEK 522

Query: 612 LGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSG 670
           LG   TV D RF KP+D  LV E+ + H  ++TVEEG + GG GS V   +A  G+    
Sbjct: 523 LG--ATVVDMRFVKPMDEALVLEMARRHEAIVTVEEGCVMGGAGSAVLECLAAAGVTTPV 580

Query: 671 VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAAT 705
           ++   + +PD + EH  P + L++ GL    I A+
Sbjct: 581 LQ---LGIPDRFTEHGDPNKLLSMMGLDAEGIEAS 612


>gi|17228095|ref|NP_484643.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nostoc sp. PCC 7120]
 gi|21263520|sp|Q8YZ80.1|DXS_ANASP RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|17129945|dbj|BAB72557.1| 1-deoxy-xylulose 5-phosphate synthase [Nostoc sp. PCC 7120]
          Length = 635

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 255/638 (39%), Positives = 375/638 (58%), Gaps = 27/638 (4%)

Query: 82  LDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAP 141
           L  + +P +L  L+I++L+Q+A +IR +    V++    L   L  VELT+ L+      
Sbjct: 3   LSEITHPNQLHGLSIRQLQQIARQIRDKHLQTVAEFGGHLGPGLGVVELTLGLYQTLDLD 62

Query: 142 VDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAG 201
            DK++WDVG Q Y HK++TGR S  HTLR+KDGI+GY  R E+++D F AGH   S+SA 
Sbjct: 63  RDKVIWDVGHQAYPHKLITGRYSDFHTLRQKDGIAGYLKRGENKFDHFGAGHASTSISAA 122

Query: 202 LGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPKI 260
           LGMA+ARD+ G++   V VI +G    G A EA+++AG+L  +N++V+LND+  S+ P +
Sbjct: 123 LGMALARDMNGEKFKAVAVIGDGALTGGMALEAINHAGHLPKTNLLVVLNDNEMSISPNV 182

Query: 261 EESPK-TSINALSSTLSRIQSS--KSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMI 317
              P+  +   LS  +  I+ +  + F+ +  V + ++  +GR        + E  + + 
Sbjct: 183 GAIPRYLNKMRLSPPVQFIKDNFEEQFKHIPFVGESLSPELGR--------IKEGMKRLA 234

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQK 377
            P+   +FEELG  Y+GPVDGHN+E+LI+  Q+   +   GPVLVHV T + +  E  +K
Sbjct: 235 VPKVGAVFEELGFTYMGPVDGHNLEELIATFQQAHQIA--GPVLVHVATIKGKGYELAEK 292

Query: 378 SEAIEKQQE--GASDSNSLPFGNYSR--TYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
            +     Q     +   ++P  N  +   Y   F   LV  AE++  I+ + A M     
Sbjct: 293 DQVGYHAQTPFNLTTGKAIP-SNKPKPPAYAKVFSHTLVKLAEQNPKIIGITAAMATGTG 351

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L   Q K P +Y DVG+AEQHAVT +AGLA  G++P   I S FLQRAYDQ+++DV  Q 
Sbjct: 352 LDKLQAKLPNQYIDVGIAEQHAVTLAAGLATEGMRPVAAIYSTFLQRAYDQIIHDVCIQN 411

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPV F +  AG+VGSDGPT  G +DI ++ C+PN+++MAP DE E+  MV T       P
Sbjct: 412 LPVFFCLDRAGIVGSDGPTHQGMYDIAYLRCIPNIVMMAPKDEAEMQRMVVTGIEHTTGP 471

Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
           +  R+PRG      L      P+EIGKG++L  G DV ++GYG MV   ++A  +LS+ G
Sbjct: 472 IAMRFPRGNGYGVPLMEEGWEPLEIGKGEILRNGDDVLIIGYGTMVYPSMQAAEILSEHG 531

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSG-- 670
           I+ TV +ARF KPLD +L+  L Q    ++T+EEG + GGFGS V+     + LLD+   
Sbjct: 532 IEATVINARFVKPLDTELIVPLAQKIGRVVTLEEGCVMGGFGSAVA-----EALLDADVV 586

Query: 671 VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALS 708
           V  + I +PD  +EHA+P +  A  GLT   IA   L 
Sbjct: 587 VPVKRIGIPDVLVEHATPDESKAELGLTSRQIAERVLQ 624


>gi|56461238|ref|YP_156519.1| 1-deoxy-D-xylulose-5-phosphate synthase [Idiomarina loihiensis
           L2TR]
 gi|81599973|sp|Q5QVE8.1|DXS_IDILO RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|56180248|gb|AAV82970.1| Deoxyxylulose-5-phosphate synthase [Idiomarina loihiensis L2TR]
          Length = 618

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 248/621 (39%), Positives = 370/621 (59%), Gaps = 27/621 (4%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+LD + +P  L+ L   +L +L  EIR  L + VS++   L S L  VELTVALH+V+H
Sbjct: 6   PLLDKINSPADLRRLPRTQLPELCAEIRQFLLTSVSQSSGHLASGLGTVELTVALHYVYH 65

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P DK++WDVG Q Y HKILTGR+  +H++R+KDG+  +  R ESEYD  + GH   S+S
Sbjct: 66  TPEDKLVWDVGHQAYPHKILTGRKQRLHSIRQKDGLHPFPWREESEYDVLSVGHSSTSIS 125

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           A LGMAVA   +  R+ +V++I +G   AG A+EAM++AG +  +M+V+LND+  S+   
Sbjct: 126 AALGMAVAAQRQSLRQKVVSIIGDGAMTAGMAFEAMNHAGDIKPDMLVVLNDNDMSI--- 182

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                  ++ AL+   +R+ S + +  LRE +K +   +    H +A++ +E+ +GM+ P
Sbjct: 183 -----SENVGALNHHFARLLSGRFYTSLREGSKKLLSPLPHIRH-FASRAEEHMKGMMAP 236

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
              T+FEELG  YIGP+DGH+++ L+  L  + SLG  GP L+H+VT++ +     ++  
Sbjct: 237 --GTIFEELGFNYIGPIDGHDVDTLVDTLSNMRSLG--GPQLLHIVTQKGKGYRPAERDP 292

Query: 380 -AIEKQQEGASDSNSLPFGNYS-RTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLF 437
                  +     +SLP       +Y + F + L   A  DK ++ +   M     +  F
Sbjct: 293 IGYHGVPKFDPKESSLPEKAPGIPSYSEIFGQWLCDTASNDKSLMAITPAMREGSGMVTF 352

Query: 438 QEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVR 497
            +++P++YFDV +AEQH+VT++AGLA  GLKP   I S FLQR YDQ+++DV  Q L V 
Sbjct: 353 SQQYPQQYFDVAIAEQHSVTYAAGLAISGLKPVVAIYSTFLQRGYDQLIHDVALQNLDVL 412

Query: 498 FVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFR 557
           F I  AG+VG+DGPT  GAFD++++ C+PNM+VMAPS+E E +DM+ T       P   R
Sbjct: 413 FAIDRAGIVGADGPTHQGAFDLSYLRCIPNMVVMAPSNEQECLDMLTTGYQYKG-PAAVR 471

Query: 558 YPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVT 617
           YPRGA V  +L   +G  I+IGK + L EG+++A L +G ++     A A       + T
Sbjct: 472 YPRGAGVGLEL--RKGKVIDIGKAQTLTEGQNIAFLNFGTLLPEVEAAAA-----KFNAT 524

Query: 618 VADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVKWRPI 676
           V D RF KPLD   + +L   H+ L+TVEE  I GG G  VS ++A      +  +   I
Sbjct: 525 VVDMRFIKPLDTACLDQLMTTHSVLVTVEENVIAGGAGGAVSEYVAQH---KASPQVLTI 581

Query: 677 VLPDNYIEHASPTQQLALAGL 697
            LPD +I+H S  +  A  GL
Sbjct: 582 GLPDEFIKHGSQGEVRAELGL 602


>gi|428211174|ref|YP_007084318.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oscillatoria acuminata PCC
           6304]
 gi|427999555|gb|AFY80398.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oscillatoria acuminata PCC
           6304]
          Length = 635

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 253/641 (39%), Positives = 375/641 (58%), Gaps = 33/641 (5%)

Query: 82  LDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAP 141
           L  + +P +L  L+I +L+Q+A +IR +    ++ +   L   L  VELT+AL+      
Sbjct: 4   LSELTHPNQLHGLSIHQLEQIARQIREKHLETIAASGGHLGPGLGVVELTLALYQTLDLD 63

Query: 142 VDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAG 201
            DK++WDVG Q Y HK++TGR +  HTLR+K+G++GY  RSES++D F AGH   S+SAG
Sbjct: 64  RDKVIWDVGHQAYPHKLITGRYNNFHTLRQKNGVAGYLKRSESKFDHFGAGHASTSISAG 123

Query: 202 LGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPKI 260
           LGMA+ARD+KG++  +V+VI +G    G A EA+++AG+L ++N++V+LND+  S+ P +
Sbjct: 124 LGMALARDMKGEKFKVVSVIGDGALTGGMALEAINHAGHLPNTNLMVVLNDNEMSISPNV 183

Query: 261 EESPK-TSINALSSTLSRIQSS--KSFRQLREVAKGMT---KRIGRGMHEWAAKVDEYAR 314
              P+  +   LS  +  ++ +  + F+ L  V +  T   +RI  GM   A        
Sbjct: 184 GAIPRYLNKMRLSPPVQFLKDNLEEQFKHLPFVGETFTPEMQRIKEGMKRLAV------- 236

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAED 374
               P+   +FEELG  YIGP+DGHN+E+LI+   +   +   GPVLVHV T + +    
Sbjct: 237 ----PKVGAVFEELGFTYIGPIDGHNLEELITTFNQAHQMP--GPVLVHVATVKGKGYAI 290

Query: 375 TQKSEAIEKQQE--GASDSNSLPFGNYSR--TYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
            +K +     Q     +   ++P  N  +  +Y   F E L+  AE++  IV + A M  
Sbjct: 291 AEKDQVGYHAQNPFNLATGKAIP-SNKPKPPSYSKVFAETLIKLAEENPKIVGITAAMAT 349

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L   Q K P +Y DVG+AEQHA T +AGLAC G++P C I S FLQRAYDQ+++D+ 
Sbjct: 350 GTGLDKLQAKLPNQYIDVGIAEQHAATLAAGLACEGIRPVCAIYSTFLQRAYDQIIHDIC 409

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q+LPV F +  AG+VG+DGPT  G +DI  + C+PN+++MAP DE EL  M+ T     
Sbjct: 410 IQKLPVFFCLDRAGIVGADGPTHQGLYDIASLRCIPNLVLMAPKDEAELQRMLVTGIDYT 469

Query: 551 DRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLS 610
           D  +  RYPRG      L      P+EIGKG++L  G D+ +LGYG+MV   L+   +L+
Sbjct: 470 DGAIAMRYPRGNGYGVPLMEEGWEPLEIGKGEILRSGDDLLILGYGSMVYPALQTAEILN 529

Query: 611 KLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDS 669
           + GI  TV +ARF KPLD +L+  L Q    ++T+EEG + GGFGS V+     +  +D 
Sbjct: 530 EHGISATVVNARFVKPLDTELILPLAQRIGKVVTMEEGCLMGGFGSAVA-----EACMDQ 584

Query: 670 GVKWRPIVL--PDNYIEHASPTQQLALAGLTGHHIAATALS 708
            +    + L  PD  ++HA P Q  A  GLT   +A   L 
Sbjct: 585 NIPVSMLRLGVPDQLVDHAKPEQSFAELGLTPSQMADRVLQ 625


>gi|237749331|ref|ZP_04579811.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oxalobacter formigenes
           OXCC13]
 gi|229380693|gb|EEO30784.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oxalobacter formigenes
           OXCC13]
          Length = 619

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 259/645 (40%), Positives = 372/645 (57%), Gaps = 40/645 (6%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L+ + +P  LK L   +L  LA E+R  +   VS+T   L S+L  VEL +ALH++F  
Sbjct: 3   LLNTINSPADLKRLQASQLPLLADELRDYIIQSVSRTGGHLSSNLGTVELAIALHYIFDT 62

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+++WDVG Q+YAHKILTGR+  ++TLR+ +G+SG+  R ESE+D F   H   S+SA
Sbjct: 63  PDDRLIWDVGHQSYAHKILTGRKDRMNTLRQLNGLSGFPKRDESEFDSFGTAHSSTSISA 122

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAG-YLDSNMIVILNDSRHSLHPK 259
            LGMA+A  +KG+    + VI +G    G A+EAM+N G Y D NM+VILND+  S+ P 
Sbjct: 123 ALGMALAAKLKGEDTYSIAVIGDGAITGGMAFEAMNNVGVYDDINMLVILNDNDMSISP- 181

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                   + AL+S  +R+ S K +   + V K +   +   M   A K +E+A+ MI P
Sbjct: 182 -------PVGALNSYFARLMSGKFYAAAKNVGKTV---LPAPMRHIARKFEEHAKSMIAP 231

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             +TLFEE G  YIGP+DGH++E L+  LQ +      GP  +H+VT   ++    + +E
Sbjct: 232 --ATLFEEFGFNYIGPIDGHDLEALVPTLQNLKE--RKGPQFLHIVT---KKGHGYKLAE 284

Query: 380 AIEKQQEG----ASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQ 435
           A      G      +    P      TY D F   L   A  DK ++ +   M+    + 
Sbjct: 285 ADPILYHGLGKFCPEEGIKPVLAAKPTYADIFGNWLCDMAAVDKKLIGITPAMKEGSGMV 344

Query: 436 LFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLP 495
            F + +PER+FDVG+AEQHAVTFSAGLAC GLKP   I S FLQRAYDQ+++DV  Q L 
Sbjct: 345 QFAKDYPERFFDVGIAEQHAVTFSAGLACEGLKPVVAIYSTFLQRAYDQLIHDVALQNLD 404

Query: 496 VRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVC 555
           V F +  +GLVG+DG T  G +D+ ++ C+PNM+VMAPS E+E   M+ T    +  P  
Sbjct: 405 VTFALDRSGLVGADGATHAGNYDMAYLRCIPNMVVMAPSSENEARQMLTTAYRYNG-PAA 463

Query: 556 FRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGID 615
            RYPRGA +  + P      + +GKG +L +GK++A+L +G MV   L A   L     D
Sbjct: 464 VRYPRGAGIGIE-PEKELTALPLGKGDILRKGKNIAILAFGTMVNPALSAGEEL-----D 517

Query: 616 VTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVKWR 674
            TV + RF KP+D +L+ E+ + H  L+TVEEG+I GG GS V   +A + L        
Sbjct: 518 ATVVNMRFVKPIDKELICEMAKTHPCLVTVEEGTIHGGAGSAVMETLAEEKLT------H 571

Query: 675 PIV---LPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREA 716
           P++   LPD +I+H    Q LA+  L  H I A+ +   G+  ++
Sbjct: 572 PVLLLGLPDKFIDHGDVGQLLAMHKLDKHGIMASIIERFGKIDDS 616


>gi|417845648|ref|ZP_12491674.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus haemolyticus
           M21639]
 gi|341954717|gb|EGT81190.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus haemolyticus
           M21639]
          Length = 625

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 255/624 (40%), Positives = 367/624 (58%), Gaps = 34/624 (5%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+L L+ +P  L+ L   +L QL  E+R  L   VS+T   L S L  VELTV LH+V+ 
Sbjct: 9   PLLSLINSPEDLRLLNKDQLPQLCQELRGYLLESVSQTSGHLASGLGTVELTVVLHYVYK 68

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG Q Y HKILTGRR  + T+R+K+GI  +  R ESE+D  + GH   S+S
Sbjct: 69  TPFDQLIWDVGHQAYPHKILTGRRDQMSTIRQKNGIHPFPWREESEFDVLSVGHSSTSIS 128

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           AGLG+AVA + +      V +I +G   AG A+EA+++AG + ++M+VILND+  S+   
Sbjct: 129 AGLGIAVAAERENAGRKTVCIIGDGAITAGMAFEALNHAGSVHTDMLVILNDNEMSI--- 185

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                  ++ AL++ L+RI S   +  LR+ +K +  ++   +  +  K +E+ +G++  
Sbjct: 186 -----SENVGALNNHLARIFSGSIYSTLRDGSKKILDKVPP-VKNFMKKTEEHMKGVMFS 239

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             STLFEE G  YIGPVDGHNI++L++ L  + +L   GP  +H+ T++ +     +K  
Sbjct: 240 PESTLFEEFGFNYIGPVDGHNIDELVATLTNMRNL--KGPQFLHIKTKKGKGYAPAEKDP 297

Query: 380 -AIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQ 438
                  +    S  LP  N   TY   F + L   AEKD  I+ +   M     +  F 
Sbjct: 298 IGFHGVPKFDPISGELPKHNTKPTYSKIFGDWLCEMAEKDSKIIGITPAMREGSGMVEFS 357

Query: 439 EKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRF 498
           ++FPE+YFDV +AEQHAVTF+ GLA GG KP   I S FLQRAYDQ+++DV  Q LPV F
Sbjct: 358 QRFPEQYFDVAIAEQHAVTFATGLAIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPVLF 417

Query: 499 VITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRY 558
            I  AG+VG+DGPT  GAFD++FM C+PNMI+M PSDE+E   M+ T      +P   RY
Sbjct: 418 AIDRAGIVGADGPTHQGAFDLSFMRCIPNMIIMTPSDENECRQMLYTGYQC-GKPAAVRY 476

Query: 559 PRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTV 618
           PRG  +   L     +P  IGK +++ EG+ +A+L +G ++ + L+A   L     + TV
Sbjct: 477 PRGNAIGVKLTPLEMLP--IGKSRLIREGQKIAILNFGTLLPSALEASEKL-----NATV 529

Query: 619 ADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG----LLDSGVKW 673
            D RF KP+DI+++  L Q H +L+T+EE +I GG GS V+  +   G    LL  G   
Sbjct: 530 VDMRFVKPIDIEMINVLAQTHDYLVTLEENAIQGGAGSAVAEVLNSSGKSTALLQLG--- 586

Query: 674 RPIVLPDNYIEHASPTQQLALAGL 697
               LPD +I  A  TQQ AL  L
Sbjct: 587 ----LPDYFIPQA--TQQEALKDL 604


>gi|169831189|ref|YP_001717171.1| deoxyxylulose-5-phosphate synthase [Candidatus Desulforudis
           audaxviator MP104C]
 gi|229813271|sp|B1I3J6.1|DXS_DESAP RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|169638033|gb|ACA59539.1| deoxyxylulose-5-phosphate synthase [Candidatus Desulforudis
           audaxviator MP104C]
          Length = 634

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 256/637 (40%), Positives = 379/637 (59%), Gaps = 30/637 (4%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +LD + +   L++LT  +L +LA E+R  + S VS+T   L  +L  VELT+ALH+VF A
Sbjct: 3   LLDGISHLTDLRALTPDQLDELAAELRDLIVSTVSRTGGHLAPNLGVVELTLALHYVFRA 62

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+I+WDVG Q Y HKILTGR+S  HTLR+ +G+SG+ +R+ESEYD F  GH   S+SA
Sbjct: 63  PDDRIVWDVGHQCYVHKILTGRKSQFHTLRQFEGLSGFPNRNESEYDCFGTGHSSTSISA 122

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKI 260
            LGMA+ARD+ G+   +V VI +G    G A+EA++ AG+L   +IV+LND+        
Sbjct: 123 ALGMALARDLSGEDRNVVAVIGDGALSGGMAFEALNQAGHLGCRLIVVLNDN-------- 174

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKR---IGRGMHEWAAKVDEYARGMI 317
           E S   ++ A++  LSR+++   + + ++  + + +R   IG  +  W  ++ +  + ++
Sbjct: 175 EMSIARNVGAMARYLSRLRTDPMYSRSKDEVESLLRRIPAIGPRVLGWIERIKDSLKYLV 234

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQK 377
                 LFEELG  Y+GP+DGHNI  +++V ++  ++   GPVLVHV+T++ +     +K
Sbjct: 235 --VAGMLFEELGFTYLGPIDGHNIPAMLNVFRQAQAV--EGPVLVHVLTKKGKGYAPAEK 290

Query: 378 SEAIEKQQEGASDSNSLPFGNYSR-TYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQL 436
           +   +    G  D  +      +R ++ + F   LV  AE D  I+ + A M     L  
Sbjct: 291 NPD-KFHGVGPFDPATGNTPTDARVSFTEVFGRTLVQLAEADSRILAITAAMTSGTGLGP 349

Query: 437 FQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPV 496
           F  +FP+R+FDVG+AEQHAVT +AGLA  G +P   I S FLQRAYDQV++DV  Q+LPV
Sbjct: 350 FSRRFPQRFFDVGIAEQHAVTLAAGLAVEGYRPVVAIYSTFLQRAYDQVLHDVCLQKLPV 409

Query: 497 RFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCF 556
            F +   G+VG DG T  G FD +F+  +PN+++MAP DE+E   M+ T     + P+  
Sbjct: 410 VFALDRGGIVGEDGVTHQGVFDFSFLRPVPNLVMMAPKDENEFQHMLKTAVE-HEGPIAV 468

Query: 557 RYPRGA----IVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
           RYPRG      +  DL     + + IG+ +VL EG D+ L+  G MV   +KA  +L++ 
Sbjct: 469 RYPRGTGTGCALDQDL-----VALPIGRAEVLREGDDITLIAIGNMVPTAVKAAEILAER 523

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGV 671
           GI+ +V +ARF KPLD K +    +    LIT+EE  I GGFGS V   +   GL D  V
Sbjct: 524 GIEASVVNARFVKPLDEKCICHYARRTGRLITLEENVIAGGFGSAVQELLVAKGLTD--V 581

Query: 672 KWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALS 708
           + + I LPD +IEH +P    A  GLT   +  TA S
Sbjct: 582 RVQLIGLPDVFIEHGAPHLLRAKYGLTVDRVVRTAES 618


>gi|297616624|ref|YP_003701783.1| deoxyxylulose-5-phosphate synthase [Syntrophothermus lipocalidus
           DSM 12680]
 gi|297144461|gb|ADI01218.1| deoxyxylulose-5-phosphate synthase [Syntrophothermus lipocalidus
           DSM 12680]
          Length = 637

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 257/616 (41%), Positives = 373/616 (60%), Gaps = 31/616 (5%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           ILD +++P  LK+L + +L++LA EIR  L + V++    L ++L  VELT+ALHHV   
Sbjct: 4   ILDTIDSPSDLKNLKVPQLEELAGEIREILVNTVAENGGHLAANLGVVELTLALHHVLDT 63

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P DKI+WDVG Q Y HK++TGR++ IHTLR+  G+SG+    ES YD FN GH   S+SA
Sbjct: 64  PRDKIIWDVGHQCYTHKVITGRKNEIHTLRRFKGLSGFPKVEESIYDVFNTGHSSTSISA 123

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKI 260
            LGMA+ARD++ +R  IV VI +G    G A+EA+++AG+   ++ V+LND+        
Sbjct: 124 ALGMALARDLQRERFRIVAVIGDGALTGGMAFEALNHAGHQGCDLTVVLNDN-------- 175

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKR---IGRGMHEWAAKVDEYARGMI 317
           E S   ++ ALS+ LS ++S  ++ + +   +   +R   IG  +   A K+ +  + +I
Sbjct: 176 EMSISRNVGALSTYLSNLRSDPAYFRRKAEIESWVQRIPGIGPNIVRVAEKLKDSLKYLI 235

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQK 377
            P    LFEELG  YIGP+DGHN++DLI+VL +    G  GPVL+HV+T++ R  E    
Sbjct: 236 VP--GMLFEELGFTYIGPIDGHNLQDLITVLGKTG--GMKGPVLIHVITQKGRGYE---- 287

Query: 378 SEAIEKQQE--GASDSN---SLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
             A+ K  E  G    N    LP    S TY   F + +V  A +D  +V + A M    
Sbjct: 288 -PALAKPDEFHGIGPFNVDTGLPLKPASVTYTQVFGDFMVQRASQDPRVVAITAAMTSGT 346

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            L  F  +FP+R+FDVG+ EQHAVT +AG+A  GL+P   I S FLQRAYDQ+V+DV  Q
Sbjct: 347 GLSDFARRFPDRFFDVGICEQHAVTLAAGMARMGLRPVVAIYSTFLQRAYDQIVHDVCLQ 406

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
            LPV F +  AGLVG DGPT  G FD++++  +PN++VMAPSDE+EL DM+ +  S  D 
Sbjct: 407 NLPVVFAVDRAGLVGEDGPTHHGVFDLSYLRHVPNLVVMAPSDENELADMLYSAFSY-DM 465

Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
           PV  RYPRG+     +   R + I + + +++ EG+++  LG G  V   L+A  +L + 
Sbjct: 466 PVAVRYPRGSGEGVGVKKERKL-IHLPQARIIREGRNMLFLGIGRGVGLALRAAEILQEQ 524

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGV 671
           GI+ +V DARF KPLD +L+  L +    ++TVE+  + GGFGS V   + +   L    
Sbjct: 525 GIEASVVDARFVKPLDRELLGSLLRQFERVVTVEDNVLHGGFGSAV---LEMAADLRRHC 581

Query: 672 KWRPIVLPDNYIEHAS 687
               + +PD +IEH S
Sbjct: 582 NILRVGVPDRFIEHGS 597


>gi|387771793|ref|ZP_10127950.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus
           parahaemolyticus HK385]
 gi|386908178|gb|EIJ72876.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus
           parahaemolyticus HK385]
          Length = 617

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 255/636 (40%), Positives = 372/636 (58%), Gaps = 30/636 (4%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+L  + +P  L+ L   +L+ LA E+R+ L   VS++   L S L  VELTVALH+V+ 
Sbjct: 6   PLLSQINSPEDLRLLNKDQLQPLADELRAYLLECVSQSSGHLASGLGVVELTVALHYVYQ 65

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG Q Y HKILTGRR  I T+R+KDGI  +  R ES YD  + GH   S+S
Sbjct: 66  TPFDQLIWDVGHQAYPHKILTGRRDQIKTIRQKDGIHPFPWREESIYDVLSVGHSSTSIS 125

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           AGLG+AVA + +      V VI +G   AG A+EA+++AG L ++M+VILND+  S+   
Sbjct: 126 AGLGIAVAAEKENAGRKTVCVIGDGAITAGMAFEALNHAGALHTDMLVILNDNEMSI--- 182

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                  ++ AL++ L+RI S   +  +R+ +K +  ++   +  +  K +E+ +G+I  
Sbjct: 183 -----SENVGALNNHLARIFSGSLYTTMRDGSKKILDKVPT-IKNFMKKSEEHMKGVIFS 236

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             STLFEELG  YIGP+DGHNI+DL+  L+ +  L   GP  +H+ T++ +  E  +   
Sbjct: 237 PESTLFEELGFNYIGPIDGHNIDDLVKTLENMRDL--KGPQFLHIRTKKGKGYEPAENDP 294

Query: 380 -AIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQ 438
                  +   +S  LP      TY D F   L   AE+D  ++ +   M     +  F 
Sbjct: 295 IGFHGVPKFDPESGKLPKTKTIPTYSDIFGNWLCEIAEQDPKLIGITPAMREGSGMVEFS 354

Query: 439 EKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRF 498
           ++FPE+YFDV +AEQHAVTF+ GLA  G KP   I S+FLQRAYDQ+++DV  Q LPV F
Sbjct: 355 KRFPEQYFDVAIAEQHAVTFATGLAIAGFKPVVAIYSSFLQRAYDQLIHDVAIQNLPVIF 414

Query: 499 VITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRY 558
            I  AG+VG+DG T  GAFD++FM C+PNM +M PSDE+E+  M+ T  S+ + P   RY
Sbjct: 415 AIDRAGIVGADGQTHQGAFDLSFMRCIPNMTIMTPSDENEMRQMLFTAYSM-NTPTAVRY 473

Query: 559 PRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTV 618
           PRG      L   +   +E+GKG+++ EGK VA+L +G M+       A +     D T+
Sbjct: 474 PRGNAQGVALQPMQ--TLEVGKGRLIREGKKVAILNFGTMLH-----EAQIVAEHNDYTL 526

Query: 619 ADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVKWRPIV 677
           AD RF KP+D  L+ +L  +H  L+T+EE +I GG GS V+ +      L S  K +P+ 
Sbjct: 527 ADMRFVKPIDGDLITQLADSHDLLVTIEENAIQGGAGSTVNEY------LQSFNKIKPLA 580

Query: 678 L---PDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
           +   PD++I  A+  +  A  GL    I     +LL
Sbjct: 581 MLGIPDHFIPQATQPEAYAEIGLNAEGIEQKIQALL 616


>gi|425458451|ref|ZP_18837939.1| 1-deoxy-D-xylulose-5-phosphate synthase [Microcystis aeruginosa PCC
           9808]
 gi|389822697|emb|CCI29615.1| 1-deoxy-D-xylulose-5-phosphate synthase [Microcystis aeruginosa PCC
           9808]
          Length = 636

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 252/641 (39%), Positives = 371/641 (57%), Gaps = 29/641 (4%)

Query: 82  LDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAP 141
           L  + +P +L  L+I++L+ +A +IR +    ++ T   L   L  VELT+AL+      
Sbjct: 3   LSEITHPNQLHGLSIRQLEDIARQIREKHLQTIAATGGHLGPGLGVVELTIALYQTLDLD 62

Query: 142 VDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAG 201
            DK+LWDVG Q Y HK+LTGR +  HTLR+K+G++GY  R ES++D F AGH   S+SAG
Sbjct: 63  RDKVLWDVGHQAYPHKLLTGRYNDFHTLRQKNGVAGYLKRCESKFDHFGAGHASTSISAG 122

Query: 202 LGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPKI 260
           LGMA+ARD KG+   +V++I +G    G A EA+++AG+L ++N++VILND+  S+ P  
Sbjct: 123 LGMALARDAKGEDFKVVSIIGDGALTGGMALEAINHAGHLPNTNIMVILNDNEMSISP-- 180

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRI---GRGMHEWAAKVDEYARGMI 317
                 ++ A+S  L++++ S+  + + +  +   K +   G  +     +V E  + + 
Sbjct: 181 ------NVGAISRYLNKVRLSEPVQFIADNLEEQLKHLPFFGDSLTPEMERVKEGMKRLA 234

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQK 377
            P+   + EELG  Y GP+DGHNI +LI+  ++   +   GPV VHV T + +  E  +K
Sbjct: 235 VPKVGAVIEELGFKYFGPIDGHNIPELIATFKQAHKV--QGPVFVHVATVKGKGYEWAEK 292

Query: 378 SEAIEKQQEG---ASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
            +     Q     A+             Y   F   L   AE D  I+ + A M     L
Sbjct: 293 DQVGYHAQNPFNLATGKPIPSSKPKPPAYSKVFGHTLTKLAENDPRIIGITAAMATGTGL 352

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             FQ K P++Y DVG+AEQHAVT + GLAC G++P   I S FLQRA+DQ+++D+  Q L
Sbjct: 353 DKFQAKLPKQYIDVGIAEQHAVTLAGGLACEGMRPVVTIYSTFLQRAFDQIIHDICIQNL 412

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PV F +  AG+VG+DGPT  G +DI ++ C+PNM +MAP DE EL  MV T  +    P+
Sbjct: 413 PVFFCMDRAGIVGADGPTHQGMYDIAYLRCIPNMTIMAPKDEAELQRMVVTGINHTSGPI 472

Query: 555 CFRYPRGAIVRTDL--PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
             RYPRG  +   L   G+  +P  IGKG++L  G DV LLGYG MV   L+   +LS+ 
Sbjct: 473 AMRYPRGNGLGVPLMEEGWEALP--IGKGEILRSGDDVLLLGYGTMVNTSLQVAEILSEH 530

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSG- 670
           GI+ TV +ARF KPLD +L+  L Q    ++T+EEG + GGFGS V     L+ L D+  
Sbjct: 531 GIEATVVNARFVKPLDTELIFPLAQRLGKVVTLEEGCLMGGFGSAV-----LEALQDANI 585

Query: 671 -VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
            V  +   +PD  ++HA+P +  A  GLT   IA   L++ 
Sbjct: 586 LVPVKRFGVPDKLVDHATPEESFADLGLTSPQIAQQVLAVF 626


>gi|270308062|ref|YP_003330120.1| 1-deoxy-D-xylulose-5-phosphate synthase [Dehalococcoides sp. VS]
 gi|270153954|gb|ACZ61792.1| 1-deoxy-D-xylulose-5-phosphate synthase [Dehalococcoides sp. VS]
          Length = 647

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 257/637 (40%), Positives = 374/637 (58%), Gaps = 24/637 (3%)

Query: 77  EPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHH 136
           E + +LD + +P  LK LT+ EL +LA +IR EL + V+     L SSL  VELT+ALH 
Sbjct: 14  EMSKLLDTINSPSDLKKLTLDELNELAAQIREELVNRVTLNGGHLASSLGVVELTIALHR 73

Query: 137 VFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCN 196
           VF +P DKI+WDVG Q+YAHK+LTGRR    TLR+  GISG+T R ES +DPF AGH   
Sbjct: 74  VFESPKDKIIWDVGHQSYAHKLLTGRREQFATLRQHGGISGFTCRDESPHDPFGAGHAST 133

Query: 197 SVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSL 256
           S+SAGLGMAVARD+      +++VI +G    G ++EA++NAG+L +  IVILND+  ++
Sbjct: 134 SISAGLGMAVARDLAKADYSVISVIGDGAISGGMSFEAINNAGHLHTKFIVILNDNGMAI 193

Query: 257 HPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWA---AKVDEYA 313
            P        S  ALS  L+ ++    F   +  AK     +  G   WA   +   ++ 
Sbjct: 194 SP--------STGALSKFLNNVRFDPRFEFAKRGAKQTITNMPFGKAVWAFTKSIKHKFE 245

Query: 314 RGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAE 373
           + M+     +L+EELG  Y+GPVDGHNI +L + L+      S  PVL+H++T++ +  +
Sbjct: 246 KSML---PGSLWEELGFIYLGPVDGHNIRELEAALKRAKDFESQ-PVLIHMITQKGKGYD 301

Query: 374 DTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
           D   +EA   +  G S  +      + ++Y   F + L      +  +V + A M     
Sbjct: 302 D---AEADAVKYHGISPKSGGLKSGHGQSYSQVFGQTLHKIMSDNPQVVAITAAMTDGCG 358

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L      FP+R FDVG+ EQHAVTF+AG+A  G  P  +I S FLQR++DQ+++DV  Q+
Sbjct: 359 LGEVAADFPDRVFDVGICEQHAVTFAAGMATQGYIPVVVIYSTFLQRSFDQIIHDVCLQK 418

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPV F I   G+VG DG T  G FD++FMS +P+MIV APSDE++L  ++ T  +   +P
Sbjct: 419 LPVVFAIDRGGIVGDDGKTHQGIFDLSFMSLIPDMIVAAPSDENDLQHLLYTAVN-SGKP 477

Query: 554 VCFRYPRGAIVRTDLP-GYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
              RYPRG     ++  G   IP  IG+ +VL  G ++A+L  G  V    +A  +L++ 
Sbjct: 478 FAIRYPRGFGEGVEMENGLHNIP--IGQNEVLSTGSEIAILATGKSVAFSREALEILAES 535

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGV 671
            I  T+ + R+  PLD +LV ++ +NH +LITVEE  I GG GS ++  +A  GL++S +
Sbjct: 536 SIKPTLVNNRYISPLDKELVIKIARNHKYLITVEENVISGGLGSRINTILAEAGLVNS-I 594

Query: 672 KWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALS 708
           K   I +PD ++EH + +   A  GL G  IA   LS
Sbjct: 595 KVANIAIPDKFVEHGNQSLLRAKYGLDGKGIAQKILS 631


>gi|359300541|ref|ZP_09186380.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus
           [parainfluenzae] CCUG 13788]
          Length = 619

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 257/626 (41%), Positives = 373/626 (59%), Gaps = 38/626 (6%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+L  +++P  L+ L   +L+ LA E+R+ L   VS++   L S L  VELT+ALH+V+ 
Sbjct: 6   PLLSQIDSPEALRLLDKDQLQTLADELRAYLLECVSQSSGHLASGLGVVELTIALHYVYQ 65

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG Q Y HKILTGRR  I T+R+KDGI  +  R ES YD  + GH   S+S
Sbjct: 66  TPFDQLIWDVGHQAYPHKILTGRRDQIKTIRQKDGIHPFPWREESVYDVLSVGHSSTSIS 125

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           AGLG+AVA   +      V VI +G   AG A+EA+++AG L ++M+VILND+  S+   
Sbjct: 126 AGLGIAVAAQKENAGRQTVCVIGDGAITAGMAFEALNHAGALHTDMLVILNDNEMSI--- 182

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                  ++ AL++ L++I S   +  +R+ +K + +++   +  +  K +E+ +G+I P
Sbjct: 183 -----SENVGALNNHLAQIFSGSLYTTVRDGSKKVLEKVPSPIKNFMKKTEEHMKGVISP 237

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             STLFEELG  YIGPVDGHNIE+L+  L+ +  L   GP  +HV T   ++ +  Q +E
Sbjct: 238 V-STLFEELGFNYIGPVDGHNIEELVKTLKNMREL--KGPQFLHVRT---KKGKGYQPAE 291

Query: 380 AIEKQQEGASD----SNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQ 435
                  G       S  LP      TY D F + L   AE+D  ++ +   M     + 
Sbjct: 292 NDPIGYHGVPKFDPASGQLPKAKSIPTYSDIFGQWLCETAEQDTKLIGITPAMREGSGMV 351

Query: 436 LFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLP 495
            F ++FPE+YFDV +AEQHAVTF+AGLA  G KP   I S+FLQRAYDQ+++DV  Q LP
Sbjct: 352 EFSKRFPEQYFDVAIAEQHAVTFAAGLAIAGYKPVVAIYSSFLQRAYDQLIHDVAIQNLP 411

Query: 496 VRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVC 555
           V F I  AG+VG+DG T  GAFD++FM C+PNM +M PSDE+E+  M+ T   + + P  
Sbjct: 412 VIFAIDRAGIVGADGQTHQGAFDLSFMRCIPNMTIMTPSDENEMRQMLYTAYQM-NTPTA 470

Query: 556 FRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGID 615
            RYPRG      L       +EIGKGK++ +G+ VA+L +G  +    K    +++ G +
Sbjct: 471 VRYPRGNAKGVALEPMES--LEIGKGKLIRQGEKVAILNFGTFLTEAQK----VAEAG-N 523

Query: 616 VTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVKWR 674
            T+AD RF KPLD  L++EL  +H  L+T+EE +I GG GS V+ ++   G      K +
Sbjct: 524 YTLADMRFVKPLDEALIQELANSHDLLVTLEENAIQGGAGSAVNEYLQKIG------KIK 577

Query: 675 PIVL---PDNYIEHASPTQQLALAGL 697
           P+V+   PD +I  +  TQQ A   L
Sbjct: 578 PLVMLGIPDEFIPQS--TQQEAYEAL 601


>gi|339484558|ref|YP_004696344.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrosomonas sp. Is79A3]
 gi|338806703|gb|AEJ02945.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrosomonas sp. Is79A3]
          Length = 614

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 258/638 (40%), Positives = 373/638 (58%), Gaps = 35/638 (5%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+LD +  P +L+ L  K+L Q+A E+R  L   V+KT   L S+L  VELT+ALH+VF+
Sbjct: 3   PLLDTISFPSQLRELDQKKLPQVAKELRGFLIESVAKTGGHLSSNLGTVELTIALHYVFN 62

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+I+WDVG QTYAHKILTGRRS +  LR + G++G+  R ESEYD F   H   S+S
Sbjct: 63  TPHDQIVWDVGHQTYAHKILTGRRSGMSKLRMQGGLAGFPRRDESEYDAFGTAHSSTSIS 122

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           A LGMAVA  +       + +I +G   AG A+EA++NAG +D+N++VILND+  S+   
Sbjct: 123 AALGMAVAAQLNKTDRRAIAIIGDGAMSAGMAFEALNNAGVMDANLLVILNDNDMSI--- 179

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                   + AL++ L+++ S + +   R   + +   +   M E A + +E+ +GM+ P
Sbjct: 180 -----SRPVGALNNYLAKLMSGRFYATARRAGEKVLGVV-PPMLELAKRAEEHVKGMVTP 233

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
              TLFEE G  YIGP+DGH+++ LI+ L  +  L   GP  +HVVT +        + +
Sbjct: 234 --GTLFEEFGFNYIGPIDGHDLDVLITTLNNIKLLD--GPQFLHVVTRKG-AGYKVAEED 288

Query: 380 AIEKQQEGASDSNS--LPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLF 437
            I     G  D     +P       Y   F + L   A +D  ++ +   M     L  F
Sbjct: 289 PILYHGVGKFDPEKGIIPKSAGKPAYTQIFGDWLCDMAAQDSRLIGITPAMREGSGLVRF 348

Query: 438 QEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVR 497
            +++PERYFDVG+AEQHAVTF+AG AC GLKP   I S FLQRAYDQ+++DV  Q LPV 
Sbjct: 349 SQEYPERYFDVGIAEQHAVTFAAGAACDGLKPVVAIYSTFLQRAYDQLIHDVAIQNLPVV 408

Query: 498 FVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFR 557
           F I  AGLVG+DGPT  G+FD++++ C+PNM VMAP+DE+E   M+ T   + D P   R
Sbjct: 409 FAIDRAGLVGADGPTHAGSFDLSYLRCIPNMTVMAPADENECRQMLYTAFQL-DTPTAVR 467

Query: 558 YPRGA----IVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
           YPRG      V+ ++   + +P  IG+G++  +G+ +ALL +G+M+  CL+A   L    
Sbjct: 468 YPRGTGSGVQVQKEM---KALP--IGRGEIRRQGERIALLAFGSMLAPCLEAAEEL---- 518

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVK 672
            + TV + RF KPLD  LV  L  +H  L+TVEE ++ GG GS V+  +    +    VK
Sbjct: 519 -NATVINMRFIKPLDDDLVASLAASHDLLVTVEENTVMGGAGSAVTESLNSQRIC---VK 574

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
              + LPD +I+     Q LA  GL+ + I  +  S+ 
Sbjct: 575 VLQLGLPDVFIDQGDHAQMLADCGLSKNGIIQSVRSVF 612


>gi|126660199|ref|ZP_01731316.1| 1-deoxy-D-xylulose-5-phosphate synthase [Cyanothece sp. CCY0110]
 gi|126618501|gb|EAZ89253.1| 1-deoxy-D-xylulose-5-phosphate synthase [Cyanothece sp. CCY0110]
          Length = 636

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 254/641 (39%), Positives = 370/641 (57%), Gaps = 25/641 (3%)

Query: 85  VENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDK 144
           + +P +L  L+I++L+ +A +IR +    ++ +   L   L  VELT+AL+       DK
Sbjct: 6   ITHPNQLHGLSIRQLEDIARQIREKHLQTIAASGGHLGPGLGVVELTIALYQTLDLDRDK 65

Query: 145 ILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGM 204
           ++WDVG Q Y HK+LTGR    HTLR+KDGI+GY  R ES++D F AGH   S+SAGLGM
Sbjct: 66  VIWDVGHQAYPHKMLTGRYHRFHTLRQKDGIAGYLKRCESKFDHFGAGHASTSISAGLGM 125

Query: 205 AVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPKIEES 263
           A+ARD KG+   +V++I +G    G A EA+++AG+L ++N++V+LND+  S+ P     
Sbjct: 126 ALARDAKGEDYKVVSIIGDGALTGGMALEAINHAGHLPNTNLMVVLNDNEMSISP----- 180

Query: 264 PKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRI---GRGMHEWAAKVDEYARGMIGPQ 320
              ++ A+S  L++++ S+  + L +  +   K +   G  +     +V E  + +  P+
Sbjct: 181 ---NVGAISRYLNKVRLSEPVQFLSDNLEEQFKHLPFFGESLTPEMERVKEGMKRLAMPK 237

Query: 321 GSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSEA 380
              + EELG  Y GP+DGHN+E+LI+  ++     ++GPV VHV T + +  E  +K + 
Sbjct: 238 VGAVIEELGFKYFGPIDGHNLEELITTFKQAHK--AVGPVFVHVATVKGKGYELAEKDQV 295

Query: 381 IEKQQE--GASDSNSLPFGN-YSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLF 437
               Q     +    +P       +Y   F   L   A+ D  IV + A M     L   
Sbjct: 296 GYHAQSPFNLATGKGIPSNKPKPPSYSKVFAHTLTTLAQNDPKIVGITAAMATGTGLDKL 355

Query: 438 QEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVR 497
           Q K P++Y DVG+AEQHAVT SAGLAC G++P   I S FLQRAYDQV++DV  Q LPV 
Sbjct: 356 QAKLPKQYIDVGIAEQHAVTLSAGLACEGMRPVVAIYSTFLQRAYDQVLHDVCIQNLPVF 415

Query: 498 FVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFR 557
           F +  AG+VG+DGPT  G +DI ++ C+PN+ VMAP DE EL  MV T  +  D P+  R
Sbjct: 416 FCLDRAGIVGADGPTHQGLYDIAYLRCIPNLTVMAPKDEAELQRMVVTGINHTDGPIAMR 475

Query: 558 YPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVT 617
           YPRG+ V   L      PI IGKG++L  G DV L+GYG MV   L+   +L + GI+ T
Sbjct: 476 YPRGSGVGVPLMEEGWEPIPIGKGEILRNGDDVLLVGYGTMVHQSLQVAEILKEHGIEAT 535

Query: 618 VADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSG--VKWR 674
           V +ARF KPLD +L+  L Q    ++T+EEG + GGFGS V+     + LLD    V  +
Sbjct: 536 VINARFVKPLDTELIVPLAQRIGKVVTLEEGCLMGGFGSAVA-----EALLDHDVVVPVK 590

Query: 675 PIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTRE 715
              +PD  ++HA P +  A   L+   IA     L   T +
Sbjct: 591 RFGVPDKLVDHAKPDESKADLELSSPQIAEQIRQLFFNTPQ 631


>gi|387127050|ref|YP_006295655.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylophaga sp. JAM1]
 gi|386274112|gb|AFI84010.1| 1-deoxy-D-xylulose 5-phosphate synthase [Methylophaga sp. JAM1]
          Length = 611

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 242/620 (39%), Positives = 371/620 (59%), Gaps = 30/620 (4%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           T +L  +++P +L+ L  K+L+QLA+EIR  +   + +T   + S+L  VELT+ALH+V+
Sbjct: 7   TSLLSQIDSPAQLRKLDRKQLEQLAIEIRELIVDQIQQTGGHISSNLGVVELTLALHYVY 66

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+++WDVG Q+Y HKILTGRR  +HT+R+  G+SG+  RSES YD F  GH   S+
Sbjct: 67  NTPEDRLVWDVGHQSYTHKILTGRRDQLHTMRQPGGLSGFPKRSESNYDSFGVGHSSTSI 126

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LGMA+A    G     V +I +G   AGQAYEA+++AG L+++M+V+LND+      
Sbjct: 127 SAALGMAIAARATGSSNRSVAIIGDGALTAGQAYEALAHAGDLNADMLVVLNDN------ 180

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
             E S   ++  +++ L+R+ S + +R  RE +K M ++I     E+A + +E+ +GM+ 
Sbjct: 181 --EMSISKNVGGMANYLARLLSGRFYRSARESSKKMLEKIPPAW-EFARRTEEHVKGMMV 237

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
           P   TLFEE+G  YIGP+DGH+++ LI+ L  + +  S G   +H+VT   ++ +  + +
Sbjct: 238 P--GTLFEEMGFNYIGPIDGHDLDTLITTLNNLRN--SKGAQFLHIVT---KKGKGFKPA 290

Query: 379 EAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQ 438
           E    +  G S +NS   G    T+   F + L       +D++ +   M     L  F 
Sbjct: 291 EQQPCKYHGVSPANSKKSG---PTFTQVFSQWLCDMGTASEDLIAITPAMCEGSGLNDFA 347

Query: 439 EKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRF 498
           ++FPERYFDVG+AEQHAVT +AG+AC G KP   I S FLQRAYDQ+++DV  Q LPV F
Sbjct: 348 KRFPERYFDVGIAEQHAVTLAAGMACEGKKPVVAIYSTFLQRAYDQLIHDVALQNLPVLF 407

Query: 499 VITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRY 558
            I  AGLVG+DG T  G+FD++++ C+PNM++M PS+E+E   M+ T     + P   RY
Sbjct: 408 AIDRAGLVGADGATHAGSFDLSYLRCIPNMLIMTPSNENECRQML-TTGFHHNGPAAVRY 466

Query: 559 PRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTV 618
           PRG+   T +      P+ + K ++   G+  A+L +G ++   L A        ID TV
Sbjct: 467 PRGSGNGTTIDPQLD-PLPLCKAQICRSGQKTAILAFGTLLHAALDAAEQ-----IDATV 520

Query: 619 ADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVKWRPIV 677
            + RF KPLD  ++ E+  +H  +IT+EE ++ GG GS V+ +    G        + + 
Sbjct: 521 VNMRFVKPLDTAVLDEIAAHHELIITIEENAVMGGAGSAVNEYFQQQG---RAANIQMMG 577

Query: 678 LPDNYIEHASPTQQLALAGL 697
           LPD +I+H    Q L+  GL
Sbjct: 578 LPDYFIDHGDHGQMLSACGL 597


>gi|407940295|ref|YP_006855936.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidovorax sp. KKS102]
 gi|407898089|gb|AFU47298.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidovorax sp. KKS102]
          Length = 631

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 256/644 (39%), Positives = 380/644 (59%), Gaps = 44/644 (6%)

Query: 78  PTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHV 137
           P P+L  + +P  L+ L+  +LK LA E+R  +   VS+T   L S+L  VELTVALHHV
Sbjct: 5   PFPLLQTINDPADLRRLSRADLKVLATELREFVLQSVSQTGGHLSSNLGTVELTVALHHV 64

Query: 138 FHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNS 197
           F+ P D+++WDVG QTY HKILTGRR  +HTLR+  GISG+  R+ES YD F   H   S
Sbjct: 65  FNTPEDRLVWDVGHQTYPHKILTGRRDRMHTLRQLGGISGFPQRAESVYDTFGTAHSSTS 124

Query: 198 VSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLH 257
           +SA LGMA+A   KG     V +I +G   AG A+EA++NAG  D N++V+LND+  S+ 
Sbjct: 125 ISAALGMALAAKRKGDNRHAVAIIGDGAMSAGMAFEALNNAGVADCNLLVVLNDNDMSIS 184

Query: 258 PKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMI 317
           P         + AL+  L+++ S + +   + V K + + +   + E+A + ++ A+GM+
Sbjct: 185 P--------PVGALNRYLAQLMSGQFYAAAKNVGKTVLRPV-PPLLEFAKRFEQQAKGMV 235

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQK 377
            P  +TLFE+ G  YIGP+DGH+++ LI  L+ + SL   GP  +HVVT++  +     +
Sbjct: 236 VP--ATLFEKFGFNYIGPIDGHDLDSLIPTLENIKSL--KGPQFLHVVTKKG-QGYKLAE 290

Query: 378 SEAIEKQQEGASDSN---SLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
           ++ +     G  D +   + P     +T+   F + L   A +D  +V +   M     +
Sbjct: 291 ADPVAYHGPGKFDPSVGLTKPATPPKQTFTQVFGQWLCDMAAQDPRLVGITPAMREGSGM 350

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F+++FP+RY+DVG+AEQHAVTF+AG+AC G+KP   I S FLQR YDQ+++DV  Q L
Sbjct: 351 VEFEKRFPDRYYDVGIAEQHAVTFAAGMACEGVKPVVAIYSTFLQRGYDQLIHDVALQNL 410

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PV F +  AGLVG+DG T  GA+DI F+ C+PNM +  P+DE E   ++++ A   D PV
Sbjct: 411 PVVFALDRAGLVGADGATHAGAYDIPFVRCIPNMSMACPADERECRQLLSS-AFEQDHPV 469

Query: 555 CFRYPRGAIVR-TDLPGYRGIPIEIGKGKVLVEGKD--------VALLGYGAMVQNCLKA 605
             RYPRG+      L    G+P   GKG++  E K         +A+L +G ++   L+ 
Sbjct: 470 AVRYPRGSGAGVAPLAALDGLP--FGKGEIRRERKGEADGKAPRIAILAFGTLLYPALEV 527

Query: 606 RALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALD 664
              L     D TV + R+ KP+D  L+R++ + H  L+TVEEG+I GG GS V+  +   
Sbjct: 528 GEAL-----DATVVNMRWAKPIDEALLRKVAERHDALVTVEEGAIMGGAGSAVTEALNAM 582

Query: 665 GLLDSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAAT 705
           G++      RP++   LPD +IEH  P + LAL GL    I A+
Sbjct: 583 GIV------RPVLQLGLPDVFIEHGDPAKLLALQGLDAAGIRAS 620


>gi|428314255|ref|YP_007125232.1| 1-deoxy-D-xylulose-5-phosphate synthase [Microcoleus sp. PCC 7113]
 gi|428255867|gb|AFZ21826.1| 1-deoxy-D-xylulose-5-phosphate synthase [Microcoleus sp. PCC 7113]
          Length = 635

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 258/638 (40%), Positives = 370/638 (57%), Gaps = 43/638 (6%)

Query: 85  VENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDK 144
           + +P +L  L+I++L+Q+A +IR +    V+ T   L   L  VELT+AL+       DK
Sbjct: 6   ITHPNQLHGLSIRQLEQIARQIREKHLQTVAATGGHLGPGLGVVELTIALYQTLDLDHDK 65

Query: 145 ILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGM 204
           +LWDVG Q Y HK+LTGR    HTLR+KDG++GY  R E+++D F AGH   S+SA LGM
Sbjct: 66  VLWDVGHQAYPHKMLTGRYHNFHTLRQKDGVAGYLKRCENKFDHFGAGHASTSISAALGM 125

Query: 205 AVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPKIEES 263
           A+ARDIKG+   +  VI +G    G A EA+++AG++ ++ ++V+LND+  S+ P     
Sbjct: 126 AMARDIKGENFKVAAVIGDGALTGGMALEAINHAGHMPNTKVLVVLNDNEMSISP----- 180

Query: 264 PKTSINALSSTLSRIQSSKSFRQLREVAKGMTKR---IGRGMHEWAAKVDEYARGMIGPQ 320
              ++ A+S  L++++ +   + L +  +   K    +G  +    A+V E  + +  P+
Sbjct: 181 ---NVGAISRYLNKVRLNPQIQFLTDNLEEQFKHLPFVGESLSPELARVKEGMKRLAVPK 237

Query: 321 GSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSEA 380
              + EELG  Y+GPVDGHN+EDLI+  +  A+    GPVLVHV T +        K  A
Sbjct: 238 VGAVIEELGFTYMGPVDGHNLEDLIATFK--AAHNHNGPVLVHVATVKG-------KGYA 288

Query: 381 IEKQQEGASDSNSLPF-----------GNYSRTYDDCFIEALVMEAEKDKDIVVVHAGME 429
           I +Q +    + S PF                +Y   F   LV  AE +  IV + A M 
Sbjct: 289 IAEQDQVGYHAQS-PFDLATGKAIPASSPKPPSYSKVFAHTLVKLAENNPKIVGITAAMA 347

Query: 430 MDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDV 489
               L     K P++Y DVG+AEQHAVT +AGLAC G++P   I S FLQRAYDQ+V+DV
Sbjct: 348 TGTGLDKLHAKLPKQYIDVGIAEQHAVTLAAGLACEGIRPVVAIYSTFLQRAYDQIVHDV 407

Query: 490 DQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASI 549
             Q LPV F +  AG+VG+DGPT  G +DI ++ CLPNM++MAP DE EL  M+ T  + 
Sbjct: 408 CIQNLPVFFCLDRAGIVGADGPTHQGMYDIAYLRCLPNMVLMAPKDEAELQRMLVTGVNY 467

Query: 550 DDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALL 609
            D P+  R+PRG      L      P+ IGKG++L  G DV L+GYG MV   ++   +L
Sbjct: 468 TDGPIAMRFPRGNGYGVPLMEEGWEPLPIGKGEILRNGDDVLLVGYGTMVHTAMQTAEIL 527

Query: 610 SKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLD 668
           S+ GI+ TV +ARF KPLD +L+  L Q    ++T+EEG + GGFGS ++     + LLD
Sbjct: 528 SEHGIEATVINARFAKPLDTELILPLAQRIGRVVTLEEGCVMGGFGSGLA-----ETLLD 582

Query: 669 SGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIA 703
             V   P++   +PD  +EHA P +  A  GLT   IA
Sbjct: 583 HNV-LVPVMRLGVPDLLVEHAKPEESKADLGLTPSQIA 619


>gi|220909494|ref|YP_002484805.1| 1-deoxy-D-xylulose-5-phosphate synthase [Cyanothece sp. PCC 7425]
 gi|254782069|sp|B8HWL8.1|DXS_CYAP4 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|219866105|gb|ACL46444.1| deoxyxylulose-5-phosphate synthase [Cyanothece sp. PCC 7425]
          Length = 632

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 262/649 (40%), Positives = 369/649 (56%), Gaps = 51/649 (7%)

Query: 82  LDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAP 141
           L  + +P +L  L+I+ELKQ+A +IR +    V+ T   L   L  VELT+ L+      
Sbjct: 3   LSEITHPNQLHGLSIQELKQIARQIRDKHLETVAATGGHLGPGLGVVELTLGLYQTLDLD 62

Query: 142 VDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAG 201
            D+++WDVG Q Y HK+LTGR    HTLR+KDG++GY +R ESE+D F AGH   S+SA 
Sbjct: 63  RDRVIWDVGHQAYPHKLLTGRYDRFHTLRQKDGVAGYLNRKESEFDHFGAGHASTSISAA 122

Query: 202 LGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPKI 260
           LGMA+ARD +G+   +V +I +G    G + EA+++AG+L  +N++V+LND+  S+ P  
Sbjct: 123 LGMALARDQRGETHKVVAIIGDGALTGGMSLEAINHAGHLPHTNLMVVLNDNEMSISP-- 180

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLRE---------VAKGMTKRIGR---GMHEWAAK 308
                 ++ ALS  L++++ +   + + E         V   +T  +GR   GM   A  
Sbjct: 181 ------NVGALSRYLNKMRLNPQVQFITENLEEQIKHFVGDSITPELGRLKGGMKRLAV- 233

Query: 309 VDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEE 368
                     P+   +FEELG  Y+GPVDGHN+E+LI+       +   GPVLVHV T +
Sbjct: 234 ----------PKVGAVFEELGFTYVGPVDGHNLEELIATFNAAHKI--PGPVLVHVATVK 281

Query: 369 NRRAEDTQKSEAIEKQQE------GASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIV 422
            +     +K +     Q       G +  +S P      +Y   F + L   AE D  I+
Sbjct: 282 GKGYAIAEKDQVGYHAQNPFNLATGKAMPSSKP---KPPSYSKVFGDTLTKLAEADSRII 338

Query: 423 VVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAY 482
            + A M     L + Q+  P++Y DVG+AEQHAVT +AGLAC G++P   I S FLQRAY
Sbjct: 339 GITAAMATGTGLDILQKHLPDQYIDVGIAEQHAVTMAAGLACEGMRPVVTIYSTFLQRAY 398

Query: 483 DQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDM 542
           DQ+V+DV  Q LPV F +  AG+VG+DGPT  G +DI ++ CLPNM++MAP DE EL  M
Sbjct: 399 DQIVHDVCIQSLPVLFCMDRAGIVGADGPTHQGMYDIAYLRCLPNMVLMAPKDEAELQQM 458

Query: 543 VATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNC 602
           + T  +  D P+  RYPRG      L      P+ IGK +VL +G D+ +L YG+MV   
Sbjct: 459 LVTGINYMDGPIGLRYPRGNGYGVALMEEGWEPLPIGKAEVLRQGDDLLMLAYGSMVYPT 518

Query: 603 LKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-IGGFGSHVSHFI 661
           L+A  +L + GI  TV +ARF KPLD +L+  L +    ++TVEEG  IGGFGS V    
Sbjct: 519 LQAAEILREHGIAATVVNARFAKPLDTELILPLAEKLGRVVTVEEGCLIGGFGSAV---- 574

Query: 662 ALDGLLDSG--VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALS 708
            L+ L D    V    I +PD  +EHA+P Q  A  GLT   IA   L+
Sbjct: 575 -LEALQDQEILVPVTRIGIPDILVEHATPDQSKAQLGLTSAQIAERVLA 622


>gi|334131671|ref|ZP_08505433.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methyloversatilis
           universalis FAM5]
 gi|333443144|gb|EGK71109.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methyloversatilis
           universalis FAM5]
          Length = 618

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 260/640 (40%), Positives = 376/640 (58%), Gaps = 33/640 (5%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+L+ +++P  +++L  ++L QLA E+R+ L   VS+T   L S+L  VELTVALHHV++
Sbjct: 5   PLLETIDSPATVRALDGRQLAQLATELRAFLLESVSRTGGHLSSNLGTVELTVALHHVYN 64

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+I+WDVG QTYAHK+LTGRR  + TLR+  G+SG+  R ESEYD F   H   S+S
Sbjct: 65  TPHDRIVWDVGHQTYAHKVLTGRREGMATLRQYKGVSGFPRRCESEYDTFGTAHSSTSIS 124

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           A LGMAVA    G+R   + VI +G   AG A+EA++NAG  D++++VILND+  S+ P 
Sbjct: 125 AALGMAVAAKALGQRRHSIAVIGDGAMTAGMAFEALNNAGVEDADLLVILNDNDMSISPP 184

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                   + AL+  L+R+ S +++   R  A      +   + E+A + +E+ +GMI P
Sbjct: 185 --------VGALNKYLTRLLSGQTYNAARR-AGAKVLELAPSLREFAKRAEEHVKGMITP 235

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
              TLFEE G +Y GP+DGH+++ LI  L+ +  L   GP  +HV+T   ++    + +E
Sbjct: 236 --GTLFEEFGFHYYGPIDGHDLDALIPTLENLREL--PGPKFLHVIT---KKGYGYKLAE 288

Query: 380 AIEKQQEGASDSNSLPF-----GNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
           A      G    + +       G    TY   F + L   A +   ++ V   M     +
Sbjct: 289 ADPILYHGVGKFDHVAGIQTGKGGGKLTYTQVFGDWLCDMAARCDKLMAVTPAMREGSGM 348

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F E++P+RYFDVG+AEQHA+TF+AG+AC G+KP   I S FLQRAYDQ+++DV  Q L
Sbjct: 349 VRFAEEYPKRYFDVGIAEQHALTFAAGMACEGVKPVVAIYSTFLQRAYDQLIHDVCLQNL 408

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PV   +  AGLVG+DG T  GAFD++++ CLPN++VM PSDE+E   M+ T A + + P 
Sbjct: 409 PVMMALDRAGLVGADGATHHGAFDLSYLLCLPNIVVMTPSDENECRQMLYT-AYLHEGPS 467

Query: 555 CFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGK-DVALLGYGAMVQNCLKARALLSKLG 613
             RYPRG+     +P      IEIG+G++   G+ D ALL +GAM+   L   A+  +  
Sbjct: 468 AVRYPRGSGPGV-VPQQDMTAIEIGRGELRRAGEGDAALLAFGAMLTPAL---AVADEF- 522

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-IGGFGSHVSHFIALDGLLDSGVK 672
            D +VA+ RF KPLD  LV EL   H  ++T+EE + IGG GS V   I   GL     +
Sbjct: 523 -DASVANMRFAKPLDEALVLELASKHRLIVTLEENALIGGAGSEVERVIHNAGL---SCR 578

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
              I LPD +++H  P+   A  GL    + A   + L R
Sbjct: 579 VLRIGLPDRFVDHGDPSLLYAEVGLDAAGVRAQVAAALQR 618


>gi|126665231|ref|ZP_01736214.1| 1-deoxy-D-xylulose-5-phosphate synthase [Marinobacter sp. ELB17]
 gi|126630601|gb|EBA01216.1| 1-deoxy-D-xylulose-5-phosphate synthase [Marinobacter sp. ELB17]
          Length = 656

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 254/637 (39%), Positives = 378/637 (59%), Gaps = 42/637 (6%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD + +P  ++ L   +L QLA E+RS L   V  T     + L  +ELTVALH+VF
Sbjct: 17  TPMLDRIGSPADMRQLPADQLTQLARELRSFLLWSVGTTGGHFGAGLGVLELTVALHYVF 76

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+++WDVG Q Y HKILTGRR  + ++R+K+G++G+  R+ES YD F  GH   S+
Sbjct: 77  NTPEDRLVWDVGHQAYPHKILTGRREQMGSIRRKNGLAGFPKRTESPYDTFGVGHSSTSI 136

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LGMA+A + +G     + VI +G   AG A+EA+++AG+L ++M+VILND+  S+  
Sbjct: 137 SAALGMAIASNQQGLTRKSIAVIGDGAMTAGMAFEALNHAGHLKADMLVILNDNDMSI-- 194

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                   ++  LS+  +++ SS+++ Q+R+ +K + + I  G+ E A K +E+ +GMI 
Sbjct: 195 ------SRNVGGLSNYFAKLLSSRTYHQMRDSSKKVLE-IAPGLRELAKKTEEHFKGMIA 247

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR----RAED 374
           P   TLFEELG  YIGP+DGH++  L+  L+ +  L   GP  +H+VT + +       D
Sbjct: 248 P--GTLFEELGFNYIGPIDGHDLPLLVETLENIRELS--GPQFLHIVTTKGKGFAPAEAD 303

Query: 375 TQKSEAIEKQQEGASDS----NSLPF--GNYSRTYDDCFIEALVMEAEKDKDIVVVHAGM 428
                AI K +  A+ +    N  P   G  +  Y + F + L   A  D+ ++ +   M
Sbjct: 304 PIGYHAINKIEPMAATTVASGNPTPVKSGPAALKYANVFGQWLCDAAAADERVMGITPAM 363

Query: 429 EMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVND 488
                L  F E+FP RYFDV +AEQHAVT +AG+AC G KP   I S FLQR YDQ+++D
Sbjct: 364 CEGSDLLAFAERFPARYFDVAIAEQHAVTLAAGMACDGAKPVVAIYSTFLQRGYDQLIHD 423

Query: 489 VDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVAS 548
           V  Q L V F I  AGLVG DGPT  GAFDI+++ C+PNM++M PSDE+E   ++ T   
Sbjct: 424 VAIQNLDVLFAIDRAGLVGEDGPTHAGAFDISYLRCIPNMVLMTPSDENETRQLLHT-GL 482

Query: 549 IDDRPVCFRYPRGAIVRTDL-PGYRGIPIEIGKGKVLVEGK------DVALLGYGAMVQN 601
           + + P   RYPRG+    ++ P    +P  +GKG+V+ E +       +A+L +GA++  
Sbjct: 483 VHEGPAAVRYPRGSGSGVEIDPLLHTLP--LGKGRVVRERERKSASGRIAILNFGALLPR 540

Query: 602 CLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHF 660
            LKA   L     D TVAD RF KPLD  L+R+L + H  L+T+EE +I GG GS V  +
Sbjct: 541 ALKAAQAL-----DATVADMRFVKPLDEDLIRQLAEQHDLLVTLEENAIAGGAGSAVCEW 595

Query: 661 IALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGL 697
           +  + +    ++   + LPD +++H S  Q L   GL
Sbjct: 596 LNQEEITMPVLQ---LGLPDKFVDHGSRNQLLEECGL 629


>gi|383757524|ref|YP_005436509.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rubrivivax gelatinosus
           IL144]
 gi|381378193|dbj|BAL95010.1| 1-deoxy-D-xylulose-5-phosphate synthase Dxs [Rubrivivax gelatinosus
           IL144]
          Length = 628

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 265/650 (40%), Positives = 381/650 (58%), Gaps = 45/650 (6%)

Query: 82  LDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAP 141
           LD ++ P  L+ ++  +L  LA E+R  + + VS+T   L S+L  VELTVALH+VF+ P
Sbjct: 5   LDSIQTPADLRRMSRSDLPGLAREVREFVLNTVSQTGGHLGSNLGTVELTVALHYVFNTP 64

Query: 142 VDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAG 201
            D+I+WDVG QTY HK+LTGRR  +HTLR+  GI+G+  R ESEYD F  GH   S+SA 
Sbjct: 65  HDRIVWDVGHQTYPHKVLTGRRERMHTLRQLGGIAGFPRRDESEYDTFATGHSSTSISAA 124

Query: 202 LGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGY----LDSNMIVILNDSRHSLH 257
           LGMA+A   KG+    + VI +G+  AG A+EA++NAG     ++++++V+LND+  S+ 
Sbjct: 125 LGMALAAKQKGEDRKAIAVIGDGSMTAGMAFEALNNAGVPHAGVNADILVVLNDNDMSIS 184

Query: 258 PKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMI 317
           P         + AL+  L+R+ S   +   RE AK + K     + E A + +E+A+GM+
Sbjct: 185 P--------PVGALNKHLARLMSGNFYAAAREGAKAVLK-AAPPLFELARRFEEHAKGMV 235

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQK 377
            P   T+FEE G  Y+GP+DGH+++ LI  L+ + +    GP  +HVVT   ++    + 
Sbjct: 236 VP--GTIFEEFGFNYVGPIDGHDLDALIPTLENLRN--KKGPQFLHVVT---KKGYGYKM 288

Query: 378 SEAIEKQQEGASD----SNSLPFGNYSR-TYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
           +EA   +   AS     +   P  +  + T+   F + L   AE D+ +V +   M    
Sbjct: 289 AEADPVKYHAASGRFNPAEGFPKSSGGKPTFTQVFGQWLCDMAEADERLVGITPAMREGS 348

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            +  F ++FP RY DVG+AEQHAVTF+AGLAC GLKP   I S FLQRAYDQ+V+DV  Q
Sbjct: 349 GMVEFHKRFPRRYHDVGIAEQHAVTFAAGLACEGLKPVVAIYSTFLQRAYDQLVHDVALQ 408

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
            LPV F +   G+VG+DGPT  G +DI F+ C+PN  ++APSDE+E    + T A   D+
Sbjct: 409 NLPVVFALDRGGIVGADGPTHAGVYDIAFIRCIPNCALLAPSDENECRQAL-TTAYRRDQ 467

Query: 553 PVCFRYPR----GAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARAL 608
           PV  RYPR    GA + T L  +     E GKG V  EG+ +A+L +G ++   L A   
Sbjct: 468 PVAVRYPRGSGCGAEIETGLSEW-----EWGKGVVRREGQRIAILAFGTLLHPALAA--- 519

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLL 667
             KLG   TV D RF KP+D  LV E+ + H  L+TVEEG + GG GS V   +A  G  
Sbjct: 520 AEKLG--ATVVDMRFVKPMDEALVLEMARRHEALVTVEEGCVMGGAGSAVLECLAAAGAT 577

Query: 668 DSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREAL 717
              ++   + +PD ++EH  P + L++ GL    I A+     G +R AL
Sbjct: 578 TPVLQ---LGIPDRFVEHGDPAKLLSMLGLDAAGIEASIRKRFG-SRPAL 623


>gi|390577033|ref|ZP_10257073.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia terrae BS001]
 gi|389931011|gb|EIM93099.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia terrae BS001]
          Length = 632

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 268/644 (41%), Positives = 378/644 (58%), Gaps = 52/644 (8%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L  +++P  L+ L  ++L+ LA E+R+ +   VS+T   L S+L  VELT+ALH+VF  
Sbjct: 4   LLKTIDDPADLRRLDRRQLQPLADELRAFVLDSVSQTGGHLSSNLGTVELTIALHYVFDT 63

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+I+WDVG QTY HKILTGRR  +H+LR+  GISG+  R ES+YD F   H   S+SA
Sbjct: 64  PRDRIVWDVGHQTYPHKILTGRRDQMHSLRQLGGISGFPKRDESQYDTFGTAHSSTSISA 123

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDS-NMIVILNDSRHSLHPK 259
            LGMA+   ++G+    + VI +G   AG A+EAM+NAG  D   ++VILND+  S+ P 
Sbjct: 124 ALGMAIGSKLRGEDRFAIAVIGDGAMTAGMAFEAMNNAGVEDDVPLLVILNDNDMSISP- 182

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGR---GMHEWAAKVDEYARGM 316
                   + AL+  L+R+ S + +      A+   +R+ R    + + A K++E+A+GM
Sbjct: 183 -------PVGALNRHLARLMSGRFY----AAARAGVERVLRHAPPVLDLARKLEEHAKGM 231

Query: 317 IGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQ 376
           I P  +TLFEE G  YIGP+DGH+++ LI  LQ +  L   GP  +HVVT   ++ +  +
Sbjct: 232 IVP--ATLFEEFGFNYIGPIDGHDLDSLIPTLQNIREL--RGPQFLHVVT---KKGQGYK 284

Query: 377 KSEAIEKQQEGASDSNSLPFGNYS-----RTYDDCFIEALVMEAEKDKDIVVVHAGMEMD 431
            +EA      G    N       S     +TY   F E L   AE D  +V +   M   
Sbjct: 285 LAEADPVLYHGPGKFNPAEGIKPSTTPAKKTYTQVFGEWLCDAAELDSRVVGITPAMREG 344

Query: 432 LSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQ 491
             +  F+++FP+RY+DVG+AEQHAVTF+ GLA  GLKP   I S FLQR YDQ+++DV  
Sbjct: 345 SGMVEFEKRFPDRYYDVGIAEQHAVTFAGGLATEGLKPVVAIYSTFLQRGYDQLIHDVAL 404

Query: 492 QRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDD 551
           Q LPV F I  AGLVG+DG T  GA+D+ F+ C+PNM VMA SDE+E   M+ T A    
Sbjct: 405 QNLPVVFAIDRAGLVGADGATHAGAYDLAFLRCIPNMTVMAASDENECRQMLYT-ALQQP 463

Query: 552 RPVCFRYPRGAIVRTDLPGYRGI-PIEIGKGKVLVE-----GKDVALLGYGAMVQNCLKA 605
            P   RYPRGA   T +   + +  + +GKG+V  +     GK +A+L +G MV   L A
Sbjct: 464 NPTAVRYPRGA--GTGVATVKQMAALPLGKGEVRRQSTQPAGKRIAILAFGTMVAPSLAA 521

Query: 606 RALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALD 664
              L     D TVA+ RF KP+D  LVREL + H  ++TVEEG + GG GS       ++
Sbjct: 522 AEQL-----DATVANMRFVKPIDADLVRELAETHDAIVTVEEGCVMGGAGS-----ACVE 571

Query: 665 GLLDSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAAT 705
            +++SGV  RP++   LPD +I+H  P + LA  GL    IA +
Sbjct: 572 AMMESGV-IRPVLQLGLPDRFIDHGDPAKLLASCGLDAAGIAKS 614


>gi|425452205|ref|ZP_18832023.1| 1-deoxy-D-xylulose-5-phosphate synthase [Microcystis aeruginosa PCC
           7941]
 gi|389766102|emb|CCI08177.1| 1-deoxy-D-xylulose-5-phosphate synthase [Microcystis aeruginosa PCC
           7941]
          Length = 636

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 251/639 (39%), Positives = 370/639 (57%), Gaps = 29/639 (4%)

Query: 82  LDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAP 141
           L  + +P +L  L++++L+ +A +IR +    ++ T   L   L  VELT+AL+      
Sbjct: 3   LSEITHPNQLHGLSLRQLEDIARQIREKHLQTIAATGGHLGPGLGVVELTIALYQTLDLD 62

Query: 142 VDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAG 201
            DK+LWDVG Q Y HK+LTGR +  HTLR+K+G++GY  R ES++D F AGH   S+SAG
Sbjct: 63  RDKVLWDVGHQAYPHKLLTGRYNDFHTLRQKNGVAGYLKRCESKFDHFGAGHASTSISAG 122

Query: 202 LGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPKI 260
           LGMA+ARD KG+   +V++I +G    G A EA+++AG+L ++N++VILND+  S+ P  
Sbjct: 123 LGMALARDAKGEDFKVVSIIGDGALTGGMALEAINHAGHLPNTNIMVILNDNEMSISP-- 180

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRI---GRGMHEWAAKVDEYARGMI 317
                 ++ A+S  L++++ S+  + + +  +   K +   G  +     +V E  + + 
Sbjct: 181 ------NVGAISRYLNKVRLSEPVQFIADNLEEQLKHLPFFGDSLTPEMERVKEGMKRLA 234

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQK 377
            P+   + EELG  Y GP+DGHNI +LI+  ++   +   GPV VHV T + +  E  +K
Sbjct: 235 VPKVGAVIEELGFKYFGPIDGHNIPELIATFKQAHKV--QGPVFVHVATVKGKGYEWAEK 292

Query: 378 SEAIEKQQEG---ASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
            +     Q     A+             Y   F   L   AE D  I+ + A M     L
Sbjct: 293 DQVGYHAQNPFNLATGKPIPSSKPKPPAYSKVFGHTLTKLAENDPRIIGITAAMATGTGL 352

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             FQ K P++Y DVG+AEQHAVT + GLAC G++P   I S FLQRA+DQ+++D+  Q L
Sbjct: 353 DKFQAKLPKQYIDVGIAEQHAVTLAGGLACEGMRPVVTIYSTFLQRAFDQIIHDICIQNL 412

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PV F +  AG+VG+DGPT  G +DI ++ C+PNM +MAP DE EL  MV T  +    P+
Sbjct: 413 PVFFCMDRAGIVGADGPTHQGMYDIAYLRCIPNMTIMAPKDEAELQRMVVTGINHTSGPI 472

Query: 555 CFRYPRGAIVRTDL--PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
             RYPRG  +   L   G+  +P  IGKG++L  G D+ LLGYG MV   L+   +LS+ 
Sbjct: 473 AMRYPRGNGLGVPLMEEGWEALP--IGKGEILRSGDDILLLGYGTMVNTSLQVAEILSEH 530

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSG- 670
           GI+ TV +ARF KPLD +L+  L Q    ++T+EEG + GGFGS V     L+ L D+  
Sbjct: 531 GIEATVVNARFVKPLDTELIFPLAQRLGKVVTLEEGCLMGGFGSAV-----LEALQDANI 585

Query: 671 -VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALS 708
            V  +   +PD  ++HA+P Q  A  GLT   IA   L+
Sbjct: 586 LVPVKRFGVPDKLVDHATPEQSFADLGLTSPQIAQQVLA 624


>gi|374367606|ref|ZP_09625667.1| 1-deoxy-D-xylulose-5-phosphate synthase [Cupriavidus basilensis
           OR16]
 gi|373100909|gb|EHP41969.1| 1-deoxy-D-xylulose-5-phosphate synthase [Cupriavidus basilensis
           OR16]
          Length = 636

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 264/640 (41%), Positives = 370/640 (57%), Gaps = 46/640 (7%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L  +++P  L+ L  ++LK LA E+R+ +   VS+T   L S+L  VELT+ALH+VF+ 
Sbjct: 5   LLKTIDDPAALRRLDRRQLKTLADELRAYVLESVSQTGGHLSSNLGTVELTIALHYVFNT 64

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+++WDVG Q+Y HKILTGRR  +H+LR+  GISG+  RSESEYD F   H   S+SA
Sbjct: 65  PEDRVVWDVGHQSYPHKILTGRRDRMHSLRQWGGISGFPRRSESEYDTFGTAHSSTSISA 124

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAG-YLDSNMIVILNDSRHSLHPK 259
            LGMA+     G++   + VI +G   AG A+EAM+NAG Y D  ++V+LND+  S+ P 
Sbjct: 125 ALGMALGARTLGEKRVSIAVIGDGAMTAGMAFEAMNNAGVYKDLPLLVVLNDNDMSISP- 183

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTK--RIGRGMHEWAAKVDEYARGMI 317
                   + AL+S L+R+ S K +   +   KG+ +   +   + E+A + +E+A+GM+
Sbjct: 184 -------PVGALNSHLARLMSGKFYAATK---KGIERVLSVAPPVLEFAKRFEEHAKGMM 233

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEV--ASLGSMGPVLVHVVTEENRRAEDT 375
            P  +TLFEE G  YIGP+DGH++E L+  LQ +   +L   GP  +HVVT   ++ +  
Sbjct: 234 VP--ATLFEEFGFNYIGPIDGHDLESLVPTLQNIRQRALEGGGPQFLHVVT---KKGQGY 288

Query: 376 QKSEAIEKQQEGASDSNSL----PFGNYSR-TYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
           + +EA      G    N      P    +R TY   F E L   A  D  +V V   M  
Sbjct: 289 KLAEADPILYHGPGKFNPAEGIRPSTKPARKTYTQVFGEWLCDMAAADPKLVAVTPAMRE 348

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              +  F+++FP RY+DVG+AEQHAVTF+ GLAC GLKP   I S FLQR YDQ+++DV 
Sbjct: 349 GSGMVEFEKRFPNRYYDVGIAEQHAVTFAGGLACEGLKPVLAIYSTFLQRGYDQLIHDVA 408

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q LPV F +  AGLVG+DG T  GA+DI F+ C+PNM+VM P+DE+E   ++ T A   
Sbjct: 409 LQNLPVVFALDRAGLVGADGATHAGAYDIAFLRCIPNMMVMTPADENECRQLL-TTAYQQ 467

Query: 551 DRPVCFRYPRGA-------IVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCL 603
             P   RYPRGA          T LP  +G     G  +    G+ VA L +G+M+   L
Sbjct: 468 ACPTAVRYPRGAGSGVATEAALTALPVGKGEMRRTGGARA---GQRVAFLAFGSMLHPAL 524

Query: 604 KARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIA 662
            A   L     D +VA+ RF KPLD  LV++L   H +L+TVEEG + GG GS V   +A
Sbjct: 525 GAAEAL-----DASVANMRFVKPLDEALVKKLASEHDYLVTVEEGCVMGGAGSAVLEALA 579

Query: 663 LDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHI 702
             G+    V    + LPD +++H  P   LA  GL    I
Sbjct: 580 AAGI---AVPVLQLGLPDRFVDHGDPAFLLAQCGLDAKGI 616


>gi|172036316|ref|YP_001802817.1| 1-deoxy-D-xylulose-5-phosphate synthase [Cyanothece sp. ATCC 51142]
 gi|354553107|ref|ZP_08972414.1| deoxyxylulose-5-phosphate synthase [Cyanothece sp. ATCC 51472]
 gi|226801549|sp|B1WWM7.1|DXS_CYAA5 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|171697770|gb|ACB50751.1| 1-deoxy-D-xylulose-5-phosphate synthase [Cyanothece sp. ATCC 51142]
 gi|353554937|gb|EHC24326.1| deoxyxylulose-5-phosphate synthase [Cyanothece sp. ATCC 51472]
          Length = 636

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 254/642 (39%), Positives = 368/642 (57%), Gaps = 27/642 (4%)

Query: 85  VENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDK 144
           + +P +L  L+ ++L+ +A +IR +    ++ +   L   L  VELT+AL+       DK
Sbjct: 6   ITHPNQLHGLSNRQLEDIARQIREKHLQTIAASGGHLGPGLGVVELTIALYQTLDLDRDK 65

Query: 145 ILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGM 204
           ++WDVG Q Y HK+LTGR    HTLR+KDGI+GY  R ES +D F AGH   S+SAGLGM
Sbjct: 66  VIWDVGHQAYPHKMLTGRYHRFHTLRQKDGIAGYLKRCESNFDHFGAGHASTSISAGLGM 125

Query: 205 AVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPKIEES 263
           A+ARD KG+   +V++I +G    G A EA+++AG+L  +N++V+LND+  S+ P     
Sbjct: 126 ALARDAKGEDYKVVSIIGDGALTGGMALEAINHAGHLPHTNLMVVLNDNEMSISP----- 180

Query: 264 PKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRI---GRGMHEWAAKVDEYARGMIGPQ 320
              ++ A+S  L++++ S   + L +  +   K +   G  +     +V E  + +  P+
Sbjct: 181 ---NVGAISRYLNKVRLSDPVQFLSDNLEEQFKHLPFFGESLTPEMERVKEGMKRLAMPK 237

Query: 321 GSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSEA 380
              + EELG  Y GP+DGHN+E+LIS  ++    G  GPV VHV T + +  E  +K + 
Sbjct: 238 VGAVIEELGFKYFGPIDGHNLEELISTFKQAHKAG--GPVFVHVATVKGKGYELAEKDQV 295

Query: 381 IEKQQE--GASDSNSLPFGNYSR--TYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQL 436
               Q     +   ++P  N  +  +Y   F   L   A+ D  I+ + A M     L  
Sbjct: 296 GYHAQSPFNLATGKAIP-SNKPKPPSYSKVFAHTLTTLAQNDPKIIGITAAMATGTGLDK 354

Query: 437 FQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPV 496
              K P++Y DVG+AEQHAVT SAGLAC G++P   I S FLQRAYDQV++DV  Q LPV
Sbjct: 355 LHAKLPKQYIDVGIAEQHAVTLSAGLACEGMRPVVAIYSTFLQRAYDQVLHDVCIQNLPV 414

Query: 497 RFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCF 556
            F +  AG+VG+DGPT  G +DI ++ C+PN+ +MAP DE EL  MV T  +  D P+  
Sbjct: 415 FFCLDRAGIVGADGPTHQGLYDIAYLRCIPNLTIMAPKDEAELQRMVVTGINHTDGPIAM 474

Query: 557 RYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDV 616
           RYPRG+ V   L      P+ IGKG++L  G DV L+GYG MV   L+   +L + GI+ 
Sbjct: 475 RYPRGSGVGVPLMEEGWEPVSIGKGEILRNGDDVLLVGYGTMVHQSLQVAEILKEHGIEA 534

Query: 617 TVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSG--VKW 673
           TV +ARF KPLD +L+  L Q    ++T+EEG + GGFGS V+     + LLD    V  
Sbjct: 535 TVVNARFVKPLDTELIVPLAQRIGKVVTLEEGCLMGGFGSAVA-----EALLDHDVVVPI 589

Query: 674 RPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTRE 715
           +   +PD  ++HA P +  A  GLT   IA     L   T +
Sbjct: 590 KRFGVPDKLVDHAKPDESKADLGLTSPQIAEEIRQLFFNTPQ 631


>gi|166369006|ref|YP_001661279.1| 1-deoxy-D-xylulose-5-phosphate synthase [Microcystis aeruginosa
           NIES-843]
 gi|189027777|sp|B0JL88.1|DXS_MICAN RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|166091379|dbj|BAG06087.1| 1-deoxyxylulose-5-phosphate synthase [Microcystis aeruginosa
           NIES-843]
          Length = 636

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 252/639 (39%), Positives = 370/639 (57%), Gaps = 29/639 (4%)

Query: 82  LDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAP 141
           L  + +P +L  L++++L+ +A +IR +    ++ T   L   L  VELT+AL+      
Sbjct: 3   LSEITHPNQLHGLSLRQLEDIARQIREKHLQTIAATGGHLGPGLGVVELTIALYQTLDLD 62

Query: 142 VDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAG 201
            DK+LWDVG Q Y HK+LTGR +  HTLR+KDGI+GY  R ES++D F AGH   S+SAG
Sbjct: 63  RDKVLWDVGHQAYPHKLLTGRYNDFHTLRQKDGIAGYLKRCESKFDHFGAGHASTSISAG 122

Query: 202 LGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPKI 260
           LGMA+ARD KG+   +V++I +G    G A EA+++AG+L ++N++VILND+  S+ P  
Sbjct: 123 LGMALARDAKGEDFKVVSIIGDGALTGGMALEAINHAGHLPNTNIMVILNDNEMSISP-- 180

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRI---GRGMHEWAAKVDEYARGMI 317
                 ++ A+S  L++++ S+  + + +  +   K +   G  +     +V E  + + 
Sbjct: 181 ------NVGAISRYLNKVRLSEPVQFIADNLEEQFKNLPFFGDSLTPEMERVKEGMKRLA 234

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQK 377
            P+   + EELG  Y GP+DGHNI +LI+  ++   +   GPV VHV T + +  E  +K
Sbjct: 235 VPKVGAVIEELGFKYFGPIDGHNIPELIATFKQAHKV--HGPVFVHVATVKGKGYEWAEK 292

Query: 378 SEAIEKQQEG---ASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
            +     Q     A+             Y   F   L   AE D  I+ + A M     L
Sbjct: 293 DQVGYHAQNPFNLATGKPIPSSKPKPPAYSKVFGHTLTKLAENDPRIIGITAAMATGTGL 352

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             FQ K P++Y DVG+AEQHAVT + GLAC G++P   I S FLQRA+DQ+++D+  Q L
Sbjct: 353 DKFQAKLPKQYIDVGIAEQHAVTLAGGLACEGMRPVVTIYSTFLQRAFDQIIHDICIQNL 412

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PV F +  AG+VG+DGPT  G +DI ++ C+PNM +MAP DE EL  MV T  +    P+
Sbjct: 413 PVFFCMDRAGIVGADGPTHQGMYDIAYLRCIPNMTIMAPKDEAELQRMVVTGINHTSGPI 472

Query: 555 CFRYPRGAIVRTDL--PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
             RYPRG  +   L   G+  +P  IGKG++L  G D+ LLGYG MV   L+   +LS+ 
Sbjct: 473 AMRYPRGNGLGVPLMEEGWEALP--IGKGEILRSGDDILLLGYGTMVNTSLQVAEILSEH 530

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSG- 670
           GI+ TV +ARF KPLD +L+  L Q    ++T+EEG + GGFGS V     L+ L D+  
Sbjct: 531 GIEATVVNARFVKPLDTELIFPLAQRLGKVVTLEEGCLMGGFGSAV-----LEALQDANI 585

Query: 671 -VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALS 708
            V  +   +PD  ++HA+P +  A  GLT   IA   L+
Sbjct: 586 LVPVKRFGVPDKLVDHATPEESFADLGLTSPQIAQQVLA 624


>gi|89901646|ref|YP_524117.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodoferax ferrireducens
           T118]
 gi|118595611|sp|Q21UG7.1|DXS_RHOFD RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|89346383|gb|ABD70586.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Rhodoferax ferrireducens
           T118]
          Length = 632

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 257/634 (40%), Positives = 377/634 (59%), Gaps = 36/634 (5%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+L  + +P  L+ +   +L  LA E+R+ L   V+KT   L S+L  VELTVALH+VF+
Sbjct: 7   PLLHTINDPADLRLVPRAQLGALADELRAYLLHSVAKTGGHLSSNLGTVELTVALHYVFN 66

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG QTY HKILTGRR  + TLR+  G+SG+  R ESEYD F   H   S+S
Sbjct: 67  TPHDRVVWDVGHQTYPHKILTGRRERMATLRQLGGLSGFPQRGESEYDDFGTAHSSTSIS 126

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           A LGMA+A  I+G+    + VI +G   AG A+EA++NAG  D N++VILND+  S+ P 
Sbjct: 127 AALGMALAAKIRGEERYAIAVIGDGALTAGMAFEALNNAGVADCNLLVILNDNDMSISP- 185

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                   + AL+  L+++ S + +   + V K + K     + E A +++E A+GM+ P
Sbjct: 186 -------PVGALNRHLAKLMSGQFYAAAKNVGKTVLKG-APPLFELAKRLEESAKGMVVP 237

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             +TLFE+ G  YIGP+DGH+++ LI  L+ +  L   GP  +HVVT++  +     +++
Sbjct: 238 --ATLFEKFGFNYIGPIDGHDLDALIPTLENIKHL--KGPQFLHVVTKKG-QGYKLAEAD 292

Query: 380 AIEKQQEGASDSN---SLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQL 436
            +     G  D       P  +  +T+   F + L   A  D  +V +   M     +  
Sbjct: 293 PVAYHGPGKFDPAVGLQAPATSPKQTFTQVFGQWLCDMAAVDPRLVGITPAMREGSGMVE 352

Query: 437 FQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPV 496
           F+++FP+R+FDVG+AEQHAVTF+AGLAC GLKP   I S FLQR YDQ+++DV  Q LPV
Sbjct: 353 FEQRFPQRFFDVGIAEQHAVTFAAGLACEGLKPVVAIYSTFLQRGYDQLIHDVAIQNLPV 412

Query: 497 RFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCF 556
            F +  AGLVG+DG T  GA+DI F+ C+PN+ V  P+DE+E   +++T A   + PV  
Sbjct: 413 VFALDRAGLVGADGATHAGAYDIPFLRCIPNVSVACPADENECRQLLST-AFAQNHPVAV 471

Query: 557 RYPRGAIVRTDL-PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGID 615
           RYPRGA   T +  G   +P   G+G++   G  VA+L +G ++   L+    L     +
Sbjct: 472 RYPRGAGAGTVVQAGLEALP--FGQGEIRRAGSSVAILAFGTLLHPALQVAEKL-----N 524

Query: 616 VTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVKWR 674
           VTV + R+ KPLD+ L+ ++  +H  L+TVEEG+I GG GS V     L+ L  +GV  +
Sbjct: 525 VTVVNMRWVKPLDVALLLQVAADHDALVTVEEGAIMGGAGSAV-----LEALQAAGV-LK 578

Query: 675 PIV---LPDNYIEHASPTQQLALAGLTGHHIAAT 705
           P++   L D +IEH  P + LAL GL    I A+
Sbjct: 579 PVLQLGLRDEFIEHGDPAKLLALQGLDAAGIQAS 612


>gi|300313125|ref|YP_003777217.1| 1-deoxy-D-xylulose-5-phosphate synthase [Herbaspirillum seropedicae
           SmR1]
 gi|300075910|gb|ADJ65309.1| 1-deoxy-D-xylulose 5-phosphate synthase protein [Herbaspirillum
           seropedicae SmR1]
          Length = 621

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 262/648 (40%), Positives = 385/648 (59%), Gaps = 40/648 (6%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L+ + +P  L+ L+  +LK LA E+R  L   VSKT   L S+L  VELT+ALH+VF+ 
Sbjct: 2   LLNTINDPADLRRLSRHQLKPLAEELRGFLLDSVSKTGGHLSSNLGTVELTIALHYVFNT 61

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+++WDVG QTY HKILTGRR  + TLR+++GISG+  R ES+YD F   H   S+SA
Sbjct: 62  PEDRVVWDVGHQTYPHKILTGRRERMDTLRQQEGISGFPRRIESQYDTFGTAHSSTSISA 121

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAG-YLDSNMIVILNDSRHSLHPK 259
            LGMA+A   +G     + VI +G   AG A+EA++NAG + D  ++VILND+  S+ P 
Sbjct: 122 ALGMALAARTQGSDRHAIAVIGDGAMTAGMAFEALNNAGVHEDVKLLVILNDNDMSISP- 180

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                   + AL+  L+R+ S K + + R+V K +   +   + E A +++E+A+GM+ P
Sbjct: 181 -------PVGALNRYLARLMSGKFYARARDVGKSV---LPGPVLELAKRLEEHAKGMVVP 230

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             +T+FEE G  YIGP+DGH+++ L+  LQ +  L   GP  +HVVT   ++ +  + +E
Sbjct: 231 --ATMFEEFGFNYIGPIDGHDLDSLVPTLQNLKHL--KGPQFLHVVT---KKGQGYKLAE 283

Query: 380 AIEKQQEGASDSNS----LPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQ 435
           A      G    N      P      TY   F + L   A  D  +V +   M     + 
Sbjct: 284 ADPVLYHGPGKFNPSEGIKPSAGGKLTYTKVFGDWLCDMAAADDKLVGITPAMREGSGMV 343

Query: 436 LFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLP 495
            F++KFP RY+DVG+AEQHAVTF+AG+AC G+KP   I S FLQRAYDQ+++DV  Q L 
Sbjct: 344 DFEKKFPNRYYDVGIAEQHAVTFAAGMACEGMKPVVAIYSTFLQRAYDQLIHDVALQNLD 403

Query: 496 VRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVC 555
           V F +  AGLVG+DG T  G +D+ F+ C+PNM+VMA SDE+E   M++T       P  
Sbjct: 404 VTFALDRAGLVGADGATHAGNYDLAFLRCIPNMVVMAASDENECRKMLSTAYQYPG-PAS 462

Query: 556 FRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGID 615
            RYPRGA +   +       + +G+G++  +GK+VA+L +G+++   L A   L     +
Sbjct: 463 VRYPRGAGIGAAVDQTLET-LPLGRGEIRRQGKNVAILAFGSLLAPSLGAGDKL-----N 516

Query: 616 VTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVKWR 674
            TVA+ RF KPLD++LV++L  +H  L+TVEEG I GG G+ VS  +A  G+       +
Sbjct: 517 ATVANMRFIKPLDVELVKQLAASHDALVTVEEGCIMGGAGAAVSEALAAAGI------NK 570

Query: 675 PIV---LPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLL 719
           PI+   LPD +I+H    Q LA  GL  + IA +     G+ +  L++
Sbjct: 571 PILHLGLPDRFIDHGDAAQLLAQCGLDANGIADSIAQRFGKDQPKLVV 618


>gi|254415673|ref|ZP_05029432.1| 1-deoxy-D-xylulose-5-phosphate synthase [Coleofasciculus
           chthonoplastes PCC 7420]
 gi|196177623|gb|EDX72628.1| 1-deoxy-D-xylulose-5-phosphate synthase [Coleofasciculus
           chthonoplastes PCC 7420]
          Length = 635

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 253/637 (39%), Positives = 373/637 (58%), Gaps = 41/637 (6%)

Query: 85  VENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDK 144
           + +P +L  L+I++L+++A +IR      V+K+   L   L  VELT+ L+       DK
Sbjct: 6   ITHPNQLHGLSIRQLEEIARQIRERHLQTVAKSGGHLGPGLGVVELTLGLYQTLDLDRDK 65

Query: 145 ILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGM 204
           ++WDVG Q Y HK++TGR +  HTLR+KDG++GY  R E+++D F AGH   S+SA LGM
Sbjct: 66  VIWDVGHQAYPHKMITGRYNHFHTLRQKDGVAGYLKRCENKFDHFGAGHASTSISAALGM 125

Query: 205 AVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPKIEES 263
           A+ARD KG+      VI +G    G A EA+++AG+L  + ++V+LND+  S+ P     
Sbjct: 126 ALARDAKGENFKTAAVIGDGALTGGMALEAINHAGHLPHTRLLVVLNDNEMSISP----- 180

Query: 264 PKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRI---GRGMHEWAAKVDEYARGMIGPQ 320
              ++ A+S +L+R++ SK  + L +  +   K     G  +     +V E  + +  P+
Sbjct: 181 ---NVGAISRSLNRVRLSKPMQFLADNLEEQFKHFPLFGESLTPELQRVKEGMKRLAVPK 237

Query: 321 GSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSEA 380
              + EELG  Y+GPVDGHN+EDLI+  +   +    GPVLVHVVT +        K  A
Sbjct: 238 VGAVLEELGFTYMGPVDGHNLEDLITTFKSAHTYS--GPVLVHVVTTKG-------KGYA 288

Query: 381 IEKQQEGASDSNSLPF---------GNYSRT--YDDCFIEALVMEAEKDKDIVVVHAGME 429
           I +Q +    + S PF          N  +   Y   F   LV  AE +  I+ + A M 
Sbjct: 289 IAEQDQVGYHAQS-PFDLTTGKAIPSNKPKPPGYSKVFAHTLVKLAENNPKIIGITAAMA 347

Query: 430 MDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDV 489
               L   QEK P++Y DVG+AEQHAVT +AGLAC G++P   I S FLQRAYDQ+++DV
Sbjct: 348 TGTGLTKLQEKLPKQYIDVGIAEQHAVTLAAGLACEGMRPVAAIYSTFLQRAYDQIIHDV 407

Query: 490 DQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASI 549
             Q LPV F +  AG+VG+DGPT  G +DI ++ C+PN++VMAP DE EL  M+ T  + 
Sbjct: 408 CIQNLPVFFCLDRAGIVGADGPTHQGMYDIAYLRCIPNIVVMAPKDEAELQRMLVTGVNY 467

Query: 550 DDRPVCFRYPRGAIVRTDL--PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARA 607
            + P+  RYPRG      L   G+ G+P  IGKG++L  G D+ L+GYG+MV   ++   
Sbjct: 468 TEGPIAMRYPRGNGYGVPLMEEGWDGLP--IGKGEILRNGDDILLIGYGSMVYPAMQTAE 525

Query: 608 LLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGL 666
           +LS+ GI+ TV +ARF KPLD +L+  L Q    ++T+EEG + GGFGS V+  ++ + +
Sbjct: 526 ILSEHGIEATVVNARFVKPLDTELILPLAQRIGKVVTLEEGCLMGGFGSAVTEALSDNNV 585

Query: 667 LDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIA 703
           L   V  +   +PD  ++HA P +  A  GLT   +A
Sbjct: 586 L---VPVKRFGVPDKLVDHAKPDESKADLGLTPSQMA 619


>gi|241759455|ref|ZP_04757559.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria flavescens
           SK114]
 gi|241320237|gb|EER56570.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria flavescens
           SK114]
          Length = 629

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 263/649 (40%), Positives = 375/649 (57%), Gaps = 57/649 (8%)

Query: 78  PTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHV 137
           P+P+LD+++ P  L+ L  K+L Q+A E+R  L   V KT     S+L AVELTVALH+V
Sbjct: 3   PSPLLDIIDTPQDLRRLEKKQLPQVAAELREFLLDSVGKTGGHFASNLGAVELTVALHYV 62

Query: 138 FHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNS 197
           +  P D ++WDVG Q+Y HKILTGR++ +HT+R+  G++G+  RSESEYD F  GH   S
Sbjct: 63  YDTPEDHLVWDVGHQSYPHKILTGRKNQMHTMRQYGGLAGFPKRSESEYDAFGVGHSSTS 122

Query: 198 VSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLH 257
           + A LGMAVA    G     V +I +G   AGQA+EA++ AG +D +++VILND+  S+ 
Sbjct: 123 IGAALGMAVADKQLGNNRRSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVILNDNEMSIS 182

Query: 258 PKIEESPK-------TSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVD 310
           P +   PK         ++ L ST+ + QSSK   +L             G  E A KV+
Sbjct: 183 PNVGALPKYLASNVVRDMHGLLSTI-KAQSSKVLDKL------------PGAMELAQKVE 229

Query: 311 EYARGMIG-----PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVV 365
              + + G      Q  +LFE  G  Y GPVDGHN+E+L+ VL+++   G  GP L+HV+
Sbjct: 230 NKIKTLAGEAEHAKQSLSLFENFGFRYTGPVDGHNVENLVDVLKDLR--GRKGPQLLHVI 287

Query: 366 TEEN---RRAE-DTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDI 421
           T++    + AE D  K  A+ K           P      TY   F + L  +A  D+ +
Sbjct: 288 TKKGNGYKFAENDPVKYHAVAKLPSEVPAQEVQP-AVVKPTYTQVFGQWLCDQAAADERL 346

Query: 422 VVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRA 481
           + +   M     L  F+++FP+RYFDVG+AEQHAVTF+ GLAC G+KP   I S FLQRA
Sbjct: 347 IAITPAMREGSGLVEFEQQFPDRYFDVGIAEQHAVTFAGGLACEGIKPVVAIYSTFLQRA 406

Query: 482 YDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVD 541
           YDQ+V+DV  Q LPV F I  AG+VGSDGPT  G +D++F+ C+PNMI+ APSDE+E   
Sbjct: 407 YDQLVHDVALQNLPVLFAIDRAGIVGSDGPTHAGLYDLSFLRCVPNMIIAAPSDENECRL 466

Query: 542 MVATVASIDDRPVCFRYPR----GAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGA 597
           +++T    +  P   RYPR    GA V   L       +EIGKG +  EG+ +A++ +G+
Sbjct: 467 LLSTCYQTNS-PSAVRYPRGTGTGATVSDGLE-----TVEIGKGIIRREGEKIAVIAFGS 520

Query: 598 MVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-IGGFGSH 656
           MV     A +L +   ++ TVAD RF KP+D +L+  L ++H +++T EE +  GG GS 
Sbjct: 521 MV-----APSLTAADNLNATVADMRFVKPIDEELIVRLARSHDYIVTAEENAEQGGAGSA 575

Query: 657 VSHFIALDGLLDSGVKWRPIVL---PDNYIEHASPTQQLALAGLTGHHI 702
           V   +A  G+       +P++L    D   EH  P + LA  GL    +
Sbjct: 576 VLEVLAKHGIC------KPVLLLGVEDKVTEHGDPKKLLADLGLNAEAV 618


>gi|390442519|ref|ZP_10230510.1| 1-deoxy-D-xylulose-5-phosphate synthase [Microcystis sp. T1-4]
 gi|389834174|emb|CCI34636.1| 1-deoxy-D-xylulose-5-phosphate synthase [Microcystis sp. T1-4]
          Length = 636

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 251/639 (39%), Positives = 370/639 (57%), Gaps = 29/639 (4%)

Query: 82  LDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAP 141
           L  + +P +L  L+I++L+ +A +IR +    ++ T   L   L  VELT+AL+      
Sbjct: 3   LSEITHPNQLHGLSIRQLEDIARQIREKHLQTIAATGGHLGPGLGVVELTIALYQTLDLD 62

Query: 142 VDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAG 201
            DK+LWDVG Q Y HK+LTGR +  HTLR+K+G++GY  R ES++D F AGH   S+SAG
Sbjct: 63  RDKVLWDVGHQAYPHKLLTGRYNDFHTLRQKNGVAGYLKRCESKFDHFGAGHASTSISAG 122

Query: 202 LGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPKI 260
           LGMA+ARD KG+   +V++I +G    G A EA+++AG+L ++N++VILND+  S+ P  
Sbjct: 123 LGMALARDAKGEDFKVVSIIGDGALTGGMALEAINHAGHLPNTNIMVILNDNEMSISP-- 180

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRI---GRGMHEWAAKVDEYARGMI 317
                 ++ A+S  L++++ S+  + + +  +   K +   G  +     +V E  + + 
Sbjct: 181 ------NVGAISRYLNKVRLSEPVQFIADNLEEQFKNLPFFGDSLTPEMERVKEGMKRLA 234

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQK 377
            P+   + EELG  Y GP+DGHNI +LI+  ++   +   GPV VHV T + +  E  +K
Sbjct: 235 VPKVGAVIEELGFKYFGPIDGHNIPELIATFKQAHKV--HGPVFVHVATVKGKGYELAEK 292

Query: 378 SEAIEKQQEG---ASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
            +     Q     A+             Y   F   L   AE D  I+ + A M     L
Sbjct: 293 DQVGYHAQNPFNLATGKPIPSSKPKPPAYSKVFGHTLTKLAENDPRIIGITAAMATGTGL 352

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             FQ K P++Y DVG+AEQHAVT + GLAC G++P   I S FLQRA+DQ+++D+  Q L
Sbjct: 353 DKFQAKLPKQYIDVGIAEQHAVTLAGGLACEGMRPVVTIYSTFLQRAFDQIIHDICIQNL 412

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PV F +  AG+VG+DGPT  G +DI ++ C+PNM +MAP DE EL  MV T  +    P+
Sbjct: 413 PVFFCMDRAGIVGADGPTHQGMYDIAYLRCIPNMTIMAPKDEAELQRMVVTGINHTSGPI 472

Query: 555 CFRYPRGAIVRTDL--PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
             RYPRG  +   L   G+  +P  IGKG++L  G D+ LLGYG MV   L+   +LS+ 
Sbjct: 473 AMRYPRGNGLGVPLMEEGWEALP--IGKGEILRSGDDILLLGYGTMVNTSLQVAEILSEH 530

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSG- 670
           GI+ TV +ARF KPLD +L+  L Q    ++T+EEG + GGFGS V     L+ L D+  
Sbjct: 531 GIEATVVNARFVKPLDTELIFPLAQRLGKVVTLEEGCLMGGFGSAV-----LEALQDANI 585

Query: 671 -VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALS 708
            V  +   +PD  ++HA+P +  A  GLT   IA   L+
Sbjct: 586 LVPVKRFGVPDKLVDHATPEESFADLGLTSPQIAQQVLA 624


>gi|443660045|ref|ZP_21132503.1| 1-deoxy-D-xylulose-5-phosphate synthase [Microcystis aeruginosa
           DIANCHI905]
 gi|159030454|emb|CAO91355.1| dxs [Microcystis aeruginosa PCC 7806]
 gi|443332561|gb|ELS47161.1| 1-deoxy-D-xylulose-5-phosphate synthase [Microcystis aeruginosa
           DIANCHI905]
          Length = 636

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 251/639 (39%), Positives = 370/639 (57%), Gaps = 29/639 (4%)

Query: 82  LDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAP 141
           L  + +P +L  L++++L+ +A +IR +    ++ T   L   L  VELT+AL+      
Sbjct: 3   LSEITHPNQLHGLSLRQLEDIARQIREKHLQTIAATGGHLGPGLGVVELTIALYQTLDLD 62

Query: 142 VDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAG 201
            DK+LWDVG Q Y HK+LTGR +  HTLR+K+G++GY  R ES++D F AGH   S+SAG
Sbjct: 63  RDKVLWDVGHQAYPHKLLTGRYNDFHTLRQKNGVAGYLKRCESKFDHFGAGHASTSISAG 122

Query: 202 LGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPKI 260
           LGMA+ARD KG+   +V++I +G    G A EA+++AG+L ++N++VILND+  S+ P  
Sbjct: 123 LGMALARDAKGEDFKVVSIIGDGALTGGMALEAINHAGHLPNTNIMVILNDNEMSISP-- 180

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRI---GRGMHEWAAKVDEYARGMI 317
                 ++ A+S  L++++ S+  + + +  +   K +   G  +     +V E  + + 
Sbjct: 181 ------NVGAISRYLNKVRLSEPVQFIADNLEEQLKHLPFFGDSLTPEMERVKEGMKRLA 234

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQK 377
            P+   + EELG  Y GP+DGHNI +LI+  ++   +   GPV VHV T + +  E  +K
Sbjct: 235 VPKVGAVIEELGFKYFGPIDGHNIPELIATFKQAHKV--HGPVFVHVATVKGKGYEWAEK 292

Query: 378 SEAIEKQQEG---ASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
            +     Q     A+             Y   F   L   AE D  I+ + A M     L
Sbjct: 293 DQVGYHAQNPFNLATGKPIPSSKPKPPAYSKVFGHTLTKLAENDPRIIGITAAMATGTGL 352

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             FQ K P++Y DVG+AEQHAVT + GLAC G++P   I S FLQRA+DQ+++D+  Q L
Sbjct: 353 DKFQAKLPKQYIDVGIAEQHAVTLAGGLACEGMRPVVTIYSTFLQRAFDQIIHDICIQNL 412

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PV F +  AG+VG+DGPT  G +DI ++ C+PNM +MAP DE EL  MV T  +    P+
Sbjct: 413 PVFFCMDRAGIVGADGPTHQGMYDIAYLRCIPNMTIMAPKDEAELQRMVVTGINHTSGPI 472

Query: 555 CFRYPRGAIVRTDL--PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
             RYPRG  +   L   G+  +P  IGKG++L  G D+ LLGYG MV   L+   +LS+ 
Sbjct: 473 AMRYPRGNGLGVPLMEEGWEALP--IGKGEILRSGDDILLLGYGTMVNTSLQVAEILSEH 530

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSG- 670
           GI+ TV +ARF KPLD +L+  L Q    ++T+EEG + GGFGS V     L+ L D+  
Sbjct: 531 GIEATVVNARFVKPLDTELIFPLAQRLGKVVTLEEGCLMGGFGSAV-----LEALQDANI 585

Query: 671 -VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALS 708
            V  +   +PD  ++HA+P Q  A  GLT   IA   L+
Sbjct: 586 LVPVKRFGVPDKLVDHATPEQSFADLGLTSPQIAQQVLA 624


>gi|359436810|ref|ZP_09226892.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudoalteromonas sp.
           BSi20311]
 gi|359446264|ref|ZP_09235960.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudoalteromonas sp.
           BSi20439]
 gi|358028506|dbj|GAA63141.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudoalteromonas sp.
           BSi20311]
 gi|358039947|dbj|GAA72209.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudoalteromonas sp.
           BSi20439]
          Length = 620

 Score =  444 bits (1141), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 253/637 (39%), Positives = 378/637 (59%), Gaps = 32/637 (5%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           D    P+L+LV  P  L+ L   +L   + E+R  L + VS++   L S L  VELTVAL
Sbjct: 4   DSSKYPLLNLVNEPAHLRDLAQDKLPAFSHELRDYLLNSVSQSSGHLASGLGTVELTVAL 63

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H+V++ P D+++WDVG Q Y HKILTGRR  +HT+R+KDG+  +  R ESEYD F+ GH 
Sbjct: 64  HYVYNTPDDRLVWDVGHQAYPHKILTGRRDQMHTIRQKDGLHPFPFRDESEYDTFSVGHS 123

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA LGM++A   +GK    V VI +G   AG A+EAM++ G + S+M++ILND+  
Sbjct: 124 STSISAALGMSIAAQKEGKGRKTVAVIGDGAITAGMAFEAMNHLGDVKSDMLIILNDN-- 181

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
                 E S   ++ AL++  +RI S   +  +RE +K +   +   + E A++++E+ +
Sbjct: 182 ------EMSISENVGALTNHFARILSGSFYTNIREGSKKLLSGV-PPVKELASRMEEHIK 234

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAED 374
           GM+ P   T FEELGL YIGP+DGH++  L+  L+ + +L   GP L+H+ T+   + + 
Sbjct: 235 GMMIP--GTFFEELGLNYIGPIDGHDVNMLVDTLRNMRNL--KGPQLLHIKTQ---KGKG 287

Query: 375 TQKSEAIEKQQEGASD----SNSLPFGN-YSRTYDDCFIEALVMEAEKDKDIVVVHAGME 429
            + +EA      G       ++SLP     + T+   F + L   AE+D  ++ +   M 
Sbjct: 288 YKPAEADPIGYHGVPKFDPATSSLPKSKPGAATFSSVFGDWLCDMAEQDNKLMAITPAMR 347

Query: 430 MDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDV 489
               +  F ++ PE+YFDV +AEQHAVT +AG AC GLKP   I S+FLQRAYDQ+++DV
Sbjct: 348 EGSGMVRFSKEHPEQYFDVAIAEQHAVTLAAGFACEGLKPVVAIYSSFLQRAYDQLIHDV 407

Query: 490 DQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASI 549
             Q LPV F I  AG+VG+DG T  GA+D++FM C+PNM++MAPSD +E   M+ T    
Sbjct: 408 ALQNLPVLFAIDRAGIVGADGETHQGAYDLSFMRCIPNMVIMAPSDTNECRQMLYTGYQA 467

Query: 550 DDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALL 609
            D PV  RYPRG+    D+       +EIGK  V+ +G  VA+L +G +++N     A L
Sbjct: 468 -DCPVAVRYPRGSAGTADIQSAMQ-QLEIGKANVIKQGTKVAILSFGTLLEN-----AQL 520

Query: 610 SKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLD 668
           +   ++ T+ + RF KPLD  L+ EL  NH  ++T+E+ +I GG GS V+ ++A      
Sbjct: 521 ATDELNATLVNMRFIKPLDTGLIDELVANHDIIVTLEDNAISGGAGSAVNEYLATQ---K 577

Query: 669 SGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAAT 705
           + VK   + +PD +I+H +  Q     GL G  I  T
Sbjct: 578 AAVKILNLGIPDEFIKHGTQQQMHDEMGLGGQGILTT 614


>gi|91787629|ref|YP_548581.1| 1-deoxy-D-xylulose-5-phosphate synthase [Polaromonas sp. JS666]
 gi|118595599|sp|Q12CQ9.1|DXS_POLSJ RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|91696854|gb|ABE43683.1| 1-deoxy-D-xylulose-5-phosphate synthase [Polaromonas sp. JS666]
          Length = 635

 Score =  444 bits (1141), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 260/641 (40%), Positives = 378/641 (58%), Gaps = 37/641 (5%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+L+ + +P  L+ L   +LK LA E+R+ +   VSKT   L S+L  VELTVALH+VF+
Sbjct: 3   PLLETINSPADLRRLPRAQLKALADELRAFVLDSVSKTGGHLSSNLGTVELTVALHYVFN 62

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG QTY HKILTGRR  + +LR+  G+SG+  R ES YD F   H   S+S
Sbjct: 63  TPEDRLVWDVGHQTYPHKILTGRRDRMGSLRQFGGLSGFPRRDESPYDTFGTAHSSTSIS 122

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAG-YLDSNMIVILNDSRHSLHP 258
           A LGMA+A   +G+    V +I +G   AG A+EA++NAG + D  ++V+LND+  S+ P
Sbjct: 123 AALGMALAAHQQGEDRHAVAIIGDGAMSAGMAFEALNNAGVHDDCKLLVVLNDNDMSISP 182

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                    + AL+  L+++ S + +   + V K    R+   + E A +++ +A+GM+ 
Sbjct: 183 --------PVGALNRYLAQLMSGRFYASAKNVGK-QVLRVAPPLLELAKRLEAHAKGMVV 233

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
           P  +TLFE  G  YIGP+DGH++E LI  L+ +  L   GP  +HVVT++  +     ++
Sbjct: 234 P--ATLFENFGFNYIGPIDGHDLESLIPTLENIKHL--KGPQFLHVVTKKG-QGYKLAEA 288

Query: 379 EAIEKQQEGASD------SNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
           + +     G  D       +S P     RT+   F + L   AE+DK +V +   M    
Sbjct: 289 DPVAYHGPGKFDPAMGLQKSSAP---AKRTFTQVFGQWLCDMAEQDKRLVGITPAMREGS 345

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            +  F ++FP RY DVG+AEQHAVTF+AG+AC GLKP   I S FLQR YDQ+++DV  Q
Sbjct: 346 GMVEFHKRFPGRYHDVGIAEQHAVTFAAGMACEGLKPVVAIYSTFLQRGYDQLIHDVALQ 405

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
            LPV F +  AGLVG+DG T  GA+DI F+ C+PNM V  P+DE+E   ++++ A   + 
Sbjct: 406 NLPVVFALDRAGLVGADGATHAGAYDIPFLRCIPNMSVACPADENECRKLLSS-AFEQNH 464

Query: 553 PVCFRYPRGAIVRTDL-PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSK 611
           PV  RYPRGA    +  PG +  P+  GKG++  EG  VA+L +G ++   L+A     K
Sbjct: 465 PVAVRYPRGAGAGVEPEPGLQ--PLPFGKGEIRREGSGVAILAFGTLLYPALQAA---EK 519

Query: 612 LGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSG 670
           LG  VTV + R+ KPLD +L+ ++  +H  L+T+EEG+I GG GS V   +   GL   G
Sbjct: 520 LG--VTVVNMRWAKPLDTELLLKVAASHEALVTLEEGAIMGGAGSAVGEALQAAGL---G 574

Query: 671 VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
                + L D +IEH  P + LAL GL    I A  ++  G
Sbjct: 575 KPLLQLGLKDEFIEHGDPAKLLALQGLDAAGIEAAVMARFG 615


>gi|297544574|ref|YP_003676876.1| deoxyxylulose-5-phosphate synthase [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
 gi|296842349|gb|ADH60865.1| deoxyxylulose-5-phosphate synthase [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
          Length = 620

 Score =  444 bits (1141), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 251/643 (39%), Positives = 378/643 (58%), Gaps = 32/643 (4%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L+ +++P  LK L  K+   L  EIR  L   VSKT   L S+L  VELT+ALH+VF +
Sbjct: 1   MLEQIDSPYDLKKLDKKDFLLLCREIRQFLIEKVSKTGGHLASNLGIVELTIALHYVFDS 60

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           PVDKI+WDVG Q Y HK+LTGR+    TLRK +G+SG+T R+ES +D F AGH   S+SA
Sbjct: 61  PVDKIIWDVGHQCYVHKMLTGRKDQFDTLRKFNGLSGFTKRTESVHDVFGAGHSSTSISA 120

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKI 260
            LG+A ARD+KG++  +V VI +G    G A EA+++AG  ++N+IV+LN +  S+    
Sbjct: 121 ALGIAKARDLKGEKYSVVAVIGDGALTGGMALEALNDAGRSETNLIVVLNHNEMSI---- 176

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTK---RIGRGMHEWAAKVDEYARGMI 317
                 ++ +LS  LS++++  ++ +L++    +      IG+ +H++  K+ +  + ++
Sbjct: 177 ----SENVGSLSLYLSKLRTDPTYNKLKQEVDNLLNIVPPIGKSLHKYLEKIKDSVKQLV 232

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQK 377
            P     FEE+G  Y+GP+DGH++  LI VL+    +   GP+L+HVVT++ +  +  +K
Sbjct: 233 VP--GMFFEEMGFTYLGPIDGHDVGGLIEVLERAKRM--KGPILIHVVTKKGKGYKFAEK 288

Query: 378 SEAIEKQQEGAS-DSNSLPFGNYSR-TYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQ 435
               EK    A  D  +  F N  + TY D F + L   A KD +IV + A M     L 
Sbjct: 289 FP--EKFHSAAPFDIQTGKFVNEEQETYSDVFGKTLTEMALKDDEIVAITAAMPEGTGLT 346

Query: 436 LFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLP 495
            F +  PER+FDVG+AEQHA TF+AG+A  G KP+  + S FLQRAYDQ+++DV  Q+LP
Sbjct: 347 HFAKLIPERFFDVGIAEQHATTFAAGMAVQGYKPYFAVYSTFLQRAYDQIIHDVCIQKLP 406

Query: 496 VRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVC 555
           V F I  AG+VG DG T  G FD++++  +PN+ +M+P D +ELV+M+    ++ D PV 
Sbjct: 407 VVFAIDRAGIVGEDGETHQGVFDLSYLRPIPNIAIMSPKDANELVEMIKLSRNL-DFPVA 465

Query: 556 FRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGID 615
            RYPRG   + D+   R   IE GK +++ EGK++A+   G MV+  LKA+ +L    + 
Sbjct: 466 IRYPRGKAGKFDIT--RECSIEFGKAELVCEGKEIAIFALGRMVEKALKAKEILKASDLQ 523

Query: 616 VTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVKWR 674
             + + RF KPLD +L+ ++     F++TVE+  I GG GS      A+  LL+S    +
Sbjct: 524 PFIVNLRFVKPLDEELILDISNKVKFIVTVEDNVIVGGVGS------AILELLNSTGIHK 577

Query: 675 PIV---LPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTR 714
           P++    PD +IE            L    IA T L      R
Sbjct: 578 PVLRLGFPDKFIEQGDVESLFKKYNLDAESIANTILQKYKEMR 620


>gi|344940448|ref|ZP_08779736.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacter
           tundripaludum SV96]
 gi|344261640|gb|EGW21911.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacter
           tundripaludum SV96]
          Length = 620

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 254/631 (40%), Positives = 375/631 (59%), Gaps = 45/631 (7%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+L  +  P  ++ L+  +LK LA E+R  L+  VS +     + L  VELT+ALH+VF 
Sbjct: 8   PLLKDINTPADVRKLSKSQLKPLAKELRDFLTHTVSISGGHFSAGLGTVELTIALHYVFD 67

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG Q Y HKILTGR+  + T+R KDG+S + SR+ESEYD F  GH   S+S
Sbjct: 68  TPSDQLVWDVGHQAYPHKILTGRKDRMTTIRTKDGVSAFPSRAESEYDAFGVGHSSTSIS 127

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           A LGMA+A ++KG+ + +V +I +G+   G A+EAM++AG LD+N++VILND+  S+ P 
Sbjct: 128 AALGMAIASELKGEDKKMVAIIGDGSITGGMAFEAMNHAGALDANLLVILNDNDMSISP- 186

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                   + A+++ L++I SSK +  +RE +K     +   + E A + +E+ +GM+ P
Sbjct: 187 -------PVGAMNNYLTKILSSKFYSSMREGSKKALSSM-PSVWELARRTEEHMKGMVVP 238

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS- 378
              TLFEELG  YIGP+DGH+I+ L+S L+ +  +   GP  +H+VT++ +     +K  
Sbjct: 239 --GTLFEELGFNYIGPIDGHDIDMLVSTLENLKHI--TGPRFLHIVTQKGKGYPPAEKDP 294

Query: 379 ------EAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
                  A +  ++    S   P      TY + F E L   A KD+ ++ +   M    
Sbjct: 295 LAYHGVPAFDPSKDCLPKSAPSP----HPTYTEVFGEWLCDMAAKDERLLGITPAMREGS 350

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            L  F + +P RYFDV +AEQHAVT +AG AC G KP   I S FLQRAYDQ+++DV  Q
Sbjct: 351 GLVKFSQCYPRRYFDVAIAEQHAVTLAAGQACQGAKPVVAIYSTFLQRAYDQMIHDVAIQ 410

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
            L V F +  AGLVG DGPT  G+FD ++M C+PNM+VMAP+DE+E   M+ T   + + 
Sbjct: 411 NLDVLFALDRAGLVGPDGPTHAGSFDYSYMRCIPNMLVMAPADENECRQMLYT-GFMHEG 469

Query: 553 PVCFRYPRG-----AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARA 607
           P   RYPRG     A+ +T       +P  +GK +V  +G  +A+L +G+MV   ++A  
Sbjct: 470 PASVRYPRGKGPGVAVDKT----MTALP--LGKAEVRHQGSRIAILAWGSMVTPAMEAGK 523

Query: 608 LLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGL 666
            L       TV + RF KP+D +LV EL ++H  LITVEE  + GG GS V+ F+    +
Sbjct: 524 QLG-----ATVVNMRFVKPIDTELVLELAKSHEVLITVEENVLAGGAGSAVNDFLQAQQI 578

Query: 667 LDSGVKWRPIVLPDNYIEHASPTQQLALAGL 697
           L   +    I LPD+++E  +  + LAL GL
Sbjct: 579 LMPVLN---IGLPDSFVEQGTREELLALCGL 606


>gi|319792407|ref|YP_004154047.1| deoxyxylulose-5-phosphate synthase [Variovorax paradoxus EPS]
 gi|315594870|gb|ADU35936.1| deoxyxylulose-5-phosphate synthase [Variovorax paradoxus EPS]
          Length = 618

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 256/639 (40%), Positives = 378/639 (59%), Gaps = 34/639 (5%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+L  + +P  ++     +L+QL+ E+R+ +   VS+T   L S+L  VELTVALHHVF+
Sbjct: 3   PLLPTLHDPSPIRQYDRAQLRQLSDEVRACVLDNVSRTGGHLSSNLGTVELTVALHHVFN 62

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG QTY HKILTGRR  + TLR+  GISG+  RSESEYD F   H   S+S
Sbjct: 63  TPHDRLVWDVGHQTYPHKILTGRRERMPTLRQIGGISGFPQRSESEYDTFGTAHSSTSIS 122

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           A LGMA+A   KG+    V +I +G   AG A+EA++NAG  D  ++VILND+  S+ P 
Sbjct: 123 AALGMAMAAKQKGEDRYTVAIIGDGALTAGMAFEALNNAGVCDCKLLVILNDNDMSISPP 182

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                   + AL+  L+++ S   +   + V K +  R    + E A + +++A+GM+ P
Sbjct: 183 --------VGALNRYLAQLMSGNFYAAAKNVGKSVL-RAAPPLFELAKRFEQHAKGMVVP 233

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             +TLFE+ G  Y+GP+DGH+++ L+  L+ +  L   GP  +HVVT++  +     +++
Sbjct: 234 --ATLFEQFGFNYVGPIDGHDLDSLVPTLENLKHLS--GPQFLHVVTKKG-QGYKLAEAD 288

Query: 380 AIEKQQEGASDSNSLPFGNYS---RTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQL 436
            +     G  D       + +   +T+   F + L   A  D  +V +   M     L  
Sbjct: 289 PVAYHGPGKFDPQVGLVKSTTVAKQTFTQVFGQWLCDTAAHDGRLVGITPAMREGSGLVE 348

Query: 437 FQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPV 496
           F+++FP+RY+DVG+AEQHAVTF+AGLAC GLKP   I S FLQRAYDQ+++DV  Q LPV
Sbjct: 349 FEQRFPDRYYDVGIAEQHAVTFAAGLACEGLKPVVAIYSTFLQRAYDQLIHDVAIQNLPV 408

Query: 497 RFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCF 556
            F +  AGLVG+DG T  GA+DI F+ C+PNM +  P+DE EL  ++ T A   + PV  
Sbjct: 409 VFALDRAGLVGADGATHAGAYDIPFLRCIPNMSIACPADERELRQLL-TSAYEQNHPVAV 467

Query: 557 RYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDV 616
           RYPRGA      P      + +GKG+V  EGK +A+L +G+++   L A   L     D 
Sbjct: 468 RYPRGAGAGV-APHLTLDALPLGKGEVRREGKRIAILAFGSLLYPALTAAESL-----DA 521

Query: 617 TVADARFCKPLDIKLVRELCQNHTFLITVEEG-SIGGFGSHVSHFIALDGLLDSGVKWRP 675
           TV + R+ KPLD++L+ ++   H  ++T+EEG ++GG GS V     L+ L  + V+ +P
Sbjct: 522 TVVNMRWAKPLDVELLLQVAGTHDAIVTLEEGATMGGAGSAV-----LEALQAANVQ-KP 575

Query: 676 IV---LPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
           ++   LPD +IEH  P + LA  GL    IAA+     G
Sbjct: 576 VLQLGLPDRFIEHGDPAKLLASIGLDATGIAASITQRFG 614


>gi|95928788|ref|ZP_01311534.1| deoxyxylulose-5-phosphate synthase [Desulfuromonas acetoxidans DSM
           684]
 gi|95135133|gb|EAT16786.1| deoxyxylulose-5-phosphate synthase [Desulfuromonas acetoxidans DSM
           684]
          Length = 625

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 257/631 (40%), Positives = 372/631 (58%), Gaps = 39/631 (6%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L+ +E P  LK  ++ EL  LA E+R E+ + VS T   L SSL  VELT+ALH+V ++
Sbjct: 4   LLENLETPADLKDFSLNELTVLAQELRDEIINTVSHTGGHLASSLGIVELTIALHYVMNS 63

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P DKI+WDVG Q YAHK+LTGR +L +TLR+ DGISG+  R ES +D F+ GH   S+SA
Sbjct: 64  PRDKIIWDVGHQAYAHKLLTGRLNLFNTLRQLDGISGFPKRKESPHDCFDVGHSSTSISA 123

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKI 260
            LGMAV RD K     +V VI +G+  AG A+EA+++AG+LD NMI+ILND+  S+ P  
Sbjct: 124 ALGMAVGRDCKELNNKVVAVIGDGSLTAGLAFEALNHAGHLDRNMIIILNDNEMSISP-- 181

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLR---EVAKGMTKRIGRGMHEWAAKVDEYARGMI 317
                 ++ ALSS LSR  +S+ F + +   E+      R G+ + + A + ++  +  +
Sbjct: 182 ------NVGALSSFLSRKMTSRLFVRFKRETEIFLKSVPRFGKDLVQLAKRTEDSFKAFV 235

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQK 377
            P    LFE  G+ Y+GP+DGH++++LI  LQ V+ L   GP L+HVVT + +  +  + 
Sbjct: 236 TP--GMLFEAFGIEYVGPIDGHSMDELIETLQNVSRLD--GPSLIHVVTRKGKGYQPAED 291

Query: 378 SEAI-------EKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
           + A+       +K       +   P      +Y   F E L   AEKD  +V + A M  
Sbjct: 292 NPALFHGVGPFDKTSGKVKTTTGAP-----PSYTSVFGEYLCQLAEKDSRLVAITAAMCT 346

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L  F E+FP+R+FDVG+AEQHAVT +AG+AC  L+P   I S FLQRAYD V++DV 
Sbjct: 347 GTGLVPFAERFPKRFFDVGIAEQHAVTLAAGMACEELRPVVAIYSTFLQRAYDNVLHDVC 406

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q LPV F +   GLVG+DGPT  G FD++++  +PN+ V  P DE EL   + T A+  
Sbjct: 407 LQNLPVTFALDRGGLVGADGPTHHGVFDLSYLRHIPNVTVAVPRDELELKRAMLT-ATTS 465

Query: 551 DRPVCFRYPRG---AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARA 607
           D P  +RYPRG    + +TD   ++  P+ IG+G+ L EG+   L+  G   +  +    
Sbjct: 466 DGPFVYRYPRGNGLGLQQTD--DFK--PLTIGQGEKLREGQAATLVSIGTFAETAMDVAV 521

Query: 608 LLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGL 666
            LS+ GI++ V DARF KPLD +L+    +    +IT+EE  + GGFGS V   +  + L
Sbjct: 522 KLSEKGIEIAVVDARFLKPLDQELLIAEARRTGNIITLEENVLAGGFGSAVMELMEKNRL 581

Query: 667 LDSGVKWRPIVLPDNYIEHASPTQQLALAGL 697
               ++   + LPD +I+  S  + L L GL
Sbjct: 582 YPRVMR---LGLPDEFIQQGSHDELLKLHGL 609


>gi|414078571|ref|YP_006997889.1| 1-deoxy-D-xylulose-5-phosphate synthase [Anabaena sp. 90]
 gi|413971987|gb|AFW96076.1| 1-deoxy-D-xylulose-5-phosphate synthase [Anabaena sp. 90]
          Length = 635

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 255/654 (38%), Positives = 377/654 (57%), Gaps = 37/654 (5%)

Query: 82  LDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAP 141
           L  + +P +L  L+I++L+Q+A +IR +    V+     L   L  VELT+ L+      
Sbjct: 3   LSEITHPNQLHGLSIRQLEQIARQIREKHLQTVAAFGGHLGPGLGVVELTLGLYQTLDLD 62

Query: 142 VDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAG 201
            DK+ WDVG Q Y HK++TGR S   TLR+KDG++GY  R E+++D F AGH   S+SA 
Sbjct: 63  RDKVTWDVGHQAYPHKLITGRYSNFDTLRQKDGVAGYLKRGENKFDHFGAGHASTSISAA 122

Query: 202 LGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPKI 260
           LGMA+ARD+KG++   V VI +G    G A EA+++AG+L  +N++V+LND+  S+ P +
Sbjct: 123 LGMALARDLKGEKFKTVAVIGDGALTGGMALEAINHAGHLPKTNLLVVLNDNEMSISPNV 182

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQ 320
              P+       S   +  S     QL+ +       +G  +     ++ E  + +  P+
Sbjct: 183 GAIPRYLNKMRLSAPVQFLSDGIEEQLKHL-----PFVGESLSPELERIKEGMKRLAVPK 237

Query: 321 GSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSEA 380
              +FEELG  Y+GPVDGHN+E+LI+  Q+   +   GPVLVHVVT + +  E  +K + 
Sbjct: 238 VGAVFEELGFTYMGPVDGHNLEELIATFQQAHQI--TGPVLVHVVTTKGKGYELAEKDQV 295

Query: 381 IEKQQE--GASDSNSLPFGNYSR--TYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQL 436
               Q     +   ++P  N  +   Y   F   LV  A ++  IV + A M     L  
Sbjct: 296 GYHAQTPFNLTTGKAIP-SNKPKPPAYAKVFSHTLVTLAAQNPKIVGITAAMATGTGLDK 354

Query: 437 FQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPV 496
            Q K P +Y DVG+AEQHA+T +AGLAC G++P   I S FLQRA+DQ+++DV  Q LPV
Sbjct: 355 LQAKLPNQYIDVGIAEQHAITLAAGLACEGMRPVAAIYSTFLQRAFDQIIHDVCIQNLPV 414

Query: 497 RFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCF 556
            F +  AG+VG+DGPT  G +DI ++  +PNM+VMAP DE EL  MV T  +  D P+  
Sbjct: 415 FFCLDRAGIVGADGPTHQGMYDIAYLRFIPNMVVMAPKDEAELQRMVVTGINYTDGPISM 474

Query: 557 RYPRGAIVRTDLPGYRGIP--------IEIGKGKVLVEGKDVALLGYGAMVQNCLKARAL 608
           R+PRG           G+P        +EIGKG++L +G DV ++GYG MV   ++A  +
Sbjct: 475 RFPRG--------NGHGVPLMEEGWESLEIGKGEILRQGDDVLIVGYGTMVYPAMQAAEI 526

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLL 667
           LS+ GI+ TV +ARF KPLD +L+  L ++   ++T+EEG + GGFGS V+     + LL
Sbjct: 527 LSEHGIEATVINARFVKPLDTELILPLAKHIGRVVTLEEGCLMGGFGSAVA-----EALL 581

Query: 668 DSG--VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLL 719
           D+   V  + I +PD  ++HA+P Q  A  GL+   IA T L    + + A L+
Sbjct: 582 DADIVVPVKRIGVPDILVDHATPDQSFAELGLSSPQIAETVLQAFFKKQAAALV 635


>gi|209528155|ref|ZP_03276628.1| deoxyxylulose-5-phosphate synthase [Arthrospira maxima CS-328]
 gi|423064948|ref|ZP_17053738.1| deoxyxylulose-5-phosphate synthase [Arthrospira platensis C1]
 gi|209491414|gb|EDZ91796.1| deoxyxylulose-5-phosphate synthase [Arthrospira maxima CS-328]
 gi|406714191|gb|EKD09359.1| deoxyxylulose-5-phosphate synthase [Arthrospira platensis C1]
          Length = 638

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 255/635 (40%), Positives = 364/635 (57%), Gaps = 31/635 (4%)

Query: 82  LDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAP 141
           L  + +P +L  L+I EL+ +A +IR +    V+ T   L   L  VELT+ L+      
Sbjct: 3   LSELTHPNQLHGLSIHELEAVAQQIREKHLETVAATGGHLGPGLGVVELTLGLYQTLDLD 62

Query: 142 VDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAG 201
            DK++WDVG Q Y HK++TGR +  +TLR+KDG++GY  R ES +D F AGH   S+SA 
Sbjct: 63  RDKVIWDVGHQAYPHKMITGRYNNFNTLRQKDGVAGYLKRCESRFDHFGAGHASTSISAA 122

Query: 202 LGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPKI 260
           LGMA+ARD++G    +V +I +G    G A EA+++AG+L ++N++V+LND+  S+ P +
Sbjct: 123 LGMALARDMQGDNYKVVAIIGDGAMTGGMALEAINHAGHLPNTNLMVVLNDNEMSISPNV 182

Query: 261 EESPK-TSINALSSTLSRIQSS--KSFRQLREVAKGMT---KRIGRGMHEWAAKVDEYAR 314
              P+  +   LS  +  ++ +  + F+Q+  V +  T   +R+  GM   A        
Sbjct: 183 GAIPRYLNKMRLSPPVQFLKDNLREQFKQIPFVGENFTPEMERLKEGMKRLAV------- 235

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAED 374
               P+   + EELG  YIGPVDGHN+EDLI   Q+   +   GPV+VHV T + +    
Sbjct: 236 ----PKLGAIIEELGFTYIGPVDGHNLEDLIETFQQAHEI--KGPVMVHVSTVKGKGYAI 289

Query: 375 TQKSEAIEKQQE--GASDSNSLPFGN-YSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMD 431
            +K +     Q     +   ++P       +Y   F + LV  AE +  I+ + A M   
Sbjct: 290 AEKDQVGYHAQSPFNLATGKAIPSNKPKPPSYSKVFADTLVKLAEDNSQILGITAAMATG 349

Query: 432 LSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQ 491
             L   Q K PE+Y DVG+AEQHAVT +AGLAC G++P   I S FLQRAYDQ+++DV  
Sbjct: 350 TGLDKLQAKLPEQYIDVGIAEQHAVTLAAGLACEGMRPVVAIYSTFLQRAYDQIIHDVCI 409

Query: 492 QRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDD 551
           Q LPV F +  AG+VG DGPT  G +DI ++ CLPNM +MAP DE EL  M+ T  +   
Sbjct: 410 QNLPVFFCLDRAGIVGVDGPTHQGMYDIAYLRCLPNMTIMAPKDEAELQQMLVTGINHTS 469

Query: 552 RPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSK 611
            P+  RYPRG+     L      PI IGKG++L +G D+ LLGYG MV   ++   +L +
Sbjct: 470 GPIAMRYPRGSGNGVPLMEEGWEPIAIGKGEILRQGDDLLLLGYGTMVNTAMQVAEILGE 529

Query: 612 LGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSG 670
            GID TV +ARF KPLD +L+  L Q    ++T+EEG I GGFGS V+     + LLD  
Sbjct: 530 HGIDATVVNARFVKPLDTELIVPLAQKIGKVVTLEEGCIMGGFGSAVA-----EALLDHD 584

Query: 671 --VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIA 703
             V  +   +PD  ++HA+P Q     GLT   IA
Sbjct: 585 VLVPVKRFGIPDQLVDHATPDQSKVDLGLTSSQIA 619


>gi|425439914|ref|ZP_18820226.1| 1-deoxy-D-xylulose-5-phosphate synthase [Microcystis aeruginosa PCC
           9717]
 gi|389719753|emb|CCH96454.1| 1-deoxy-D-xylulose-5-phosphate synthase [Microcystis aeruginosa PCC
           9717]
          Length = 636

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 251/639 (39%), Positives = 370/639 (57%), Gaps = 29/639 (4%)

Query: 82  LDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAP 141
           L  + +P +L  L++++L+ +A +IR +    ++ T   L   L  VELT+AL+      
Sbjct: 3   LSEITHPNQLHGLSLRQLEDIARQIREKHLQTIAATGGHLGPGLGVVELTIALYQTLDLD 62

Query: 142 VDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAG 201
            DK+LWDVG Q Y HK+LTGR +  HTLR+K+G++GY  R ES++D F AGH   S+SAG
Sbjct: 63  RDKVLWDVGHQAYPHKLLTGRYNDFHTLRQKNGVAGYLKRCESKFDHFGAGHASTSISAG 122

Query: 202 LGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPKI 260
           LGMA+ARD KG+   +V++I +G    G A EA+++AG+L ++N++VILND+  S+ P  
Sbjct: 123 LGMALARDAKGEDFKVVSIIGDGALTGGMALEAINHAGHLPNTNIMVILNDNEMSISP-- 180

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRI---GRGMHEWAAKVDEYARGMI 317
                 ++ A+S  L++++ S+  + + +  +   K +   G  +     +V E  + + 
Sbjct: 181 ------NVGAISRYLNKVRLSEPVQFIADNLEEQFKNLPFFGDSLTPEMERVKEGMKRLA 234

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQK 377
            P+   + EELG  Y GP+DGHNI +LI+  ++   +   GPV VHV T + +  E  +K
Sbjct: 235 VPKVGAVIEELGFKYFGPIDGHNIPELIATFKQAHKV--HGPVFVHVATVKGKGYELAEK 292

Query: 378 SEAIEKQQEG---ASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
            +     Q     A+             Y   F   L   AE D  I+ + A M     L
Sbjct: 293 DQVGYHAQNPFNLATGKPIPSSKPKPPAYSKVFGHTLTKLAENDPRIIGITAAMATGTGL 352

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             FQ K P++Y DVG+AEQHAVT + GLAC G++P   I S FLQRA+DQ+++D+  Q L
Sbjct: 353 DKFQAKLPKQYIDVGIAEQHAVTLAGGLACEGMRPVVTIYSTFLQRAFDQIIHDICIQNL 412

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PV F +  AG+VG+DGPT  G +DI ++ C+PNM +MAP DE EL  MV T  +    P+
Sbjct: 413 PVFFCMDRAGIVGADGPTHQGMYDIAYLRCIPNMTIMAPKDEAELQRMVVTGINHTSGPI 472

Query: 555 CFRYPRGAIVRTDL--PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
             RYPRG  +   L   G+  +P  IGKG++L  G DV LLGYG MV   L+   +LS+ 
Sbjct: 473 AMRYPRGNGLGVPLMEEGWEALP--IGKGEILRSGDDVLLLGYGTMVNTSLQVAEILSEH 530

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSG- 670
           GI+ TV +ARF KPLD +L+  L Q    ++T+EEG + GGFGS V     L+ L D+  
Sbjct: 531 GIEATVVNARFVKPLDTELIFPLAQRLGKVVTLEEGCLMGGFGSAV-----LEALQDANI 585

Query: 671 -VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALS 708
            V  +   +PD  ++HA+P +  A  GLT   IA   L+
Sbjct: 586 LVPVKRFGVPDKLVDHATPEESFADLGLTSPQIAQQVLA 624


>gi|240949320|ref|ZP_04753663.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus minor
           NM305]
 gi|240296271|gb|EER46920.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus minor
           NM305]
          Length = 617

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 252/636 (39%), Positives = 375/636 (58%), Gaps = 30/636 (4%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+L  + +P  L+ L  ++L+ LA E+R+ L   VS++   L S L  VELTVALH+V+ 
Sbjct: 6   PLLSKINSPEDLRLLNKEQLQPLADELRAYLLECVSQSSGHLASGLGVVELTVALHYVYQ 65

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG Q Y HKILTGRR  I T+R+KDGI  +  R ES YD  + GH   S+S
Sbjct: 66  TPFDQLIWDVGHQAYPHKILTGRRDQIKTIRQKDGIHPFPWREESIYDVLSVGHSSTSIS 125

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           AGLG+AVA + +      V VI +G   AG A+EA+++AG L ++M+VILND+  S+   
Sbjct: 126 AGLGIAVAAEKENAGRKTVCVIGDGAITAGMAFEALNHAGALHTDMLVILNDNEMSI--- 182

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                  ++ AL++ L++I S   +  +R+ +K +  ++   +  +  K +E+ +G+I  
Sbjct: 183 -----SENVGALNNHLAQIFSGSLYTTVRDGSKKILDKVPT-IKNFMKKSEEHMKGVIFS 236

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             STLFEELG  YIGPVDGHNIE+L+  L  +  L   GP  +H+ T++ +     +   
Sbjct: 237 PESTLFEELGFNYIGPVDGHNIEELVKTLSNMREL--KGPQFLHIRTKKGKGYTPAENDP 294

Query: 380 -AIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQ 438
                  +    S  LP      TY D F   L   A +D  ++ +   M     +  F 
Sbjct: 295 IGFHGVPKFDPASGQLPKSKNVPTYSDIFGNWLCEMAAQDAKLIGITPAMREGSGMVEFS 354

Query: 439 EKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRF 498
           ++FPE+YFDV +AEQHAVTF+AGLA  G KP   I S+FLQRAYDQ+++DV  Q LPV F
Sbjct: 355 KRFPEQYFDVAIAEQHAVTFAAGLAIAGYKPVVAIYSSFLQRAYDQLIHDVAIQNLPVIF 414

Query: 499 VITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRY 558
            I  AG+VG+DG T  GAFD+++M C+PNM +M PSDE+E+  M+ T  ++ + PV  RY
Sbjct: 415 AIDRAGIVGADGQTHQGAFDLSYMRCIPNMTIMTPSDENEMRQMLYTAYTL-NTPVAVRY 473

Query: 559 PRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTV 618
           PRG     +L      P+ IGKG++L +GK VA+L +GA++    +A+ +  +   D T+
Sbjct: 474 PRGNAQGVELQPMN--PLTIGKGRILRKGKKVAILNFGALLN---EAKIVAEQY--DYTL 526

Query: 619 ADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVKWRPIV 677
            D RF KPLD  L+ EL ++H +L+T+EE +I GG GS V+ ++   G      K +P++
Sbjct: 527 VDMRFVKPLDEHLISELAESHDYLVTLEENAIQGGAGSAVNEYLQSIG------KIKPLM 580

Query: 678 ---LPDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
              +PD ++  A+  +   + GL    IA     L 
Sbjct: 581 ILGIPDYFVPQATQQEAYEMLGLNSTGIAKAIQKLF 616


>gi|53728900|ref|ZP_00134615.2| COG1154: Deoxyxylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|126207695|ref|YP_001052920.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 5b str. L20]
 gi|165975663|ref|YP_001651256.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
 gi|190149479|ref|YP_001968004.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|303252030|ref|ZP_07338201.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|307245020|ref|ZP_07527117.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|307247194|ref|ZP_07529245.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|307253973|ref|ZP_07535825.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|307258428|ref|ZP_07540169.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|307262798|ref|ZP_07544425.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
 gi|166198593|sp|A3MYS9.1|DXS_ACTP2 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|229807523|sp|B3H050.1|DXS_ACTP7 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|229807524|sp|B0BSL0.1|DXS_ACTPJ RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|126096487|gb|ABN73315.1| 1-deoxy-D-xylulose-5-phosphate synthase (DXPS) [Actinobacillus
           pleuropneumoniae serovar 5b str. L20]
 gi|165875764|gb|ABY68812.1| 1-deoxyxylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
 gi|189914610|gb|ACE60862.1| 1-deoxy-D-xylulose-5-phosphate synthase (DXPS) [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|302649460|gb|EFL79645.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|306854185|gb|EFM86393.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|306856332|gb|EFM88484.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|306863177|gb|EFM95119.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|306867612|gb|EFM99459.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|306871943|gb|EFN03660.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
          Length = 617

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 254/624 (40%), Positives = 375/624 (60%), Gaps = 33/624 (5%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+L  + +P  L+ L  ++L+ +A E+R+ L   VS+T   L S L  VELTVALH+V+ 
Sbjct: 6   PLLSQINSPEDLRLLAKEQLQSVADELRAYLLESVSQTSGHLASGLGVVELTVALHYVYQ 65

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG Q Y HKILTGRR  +HT+R+K+GI  +  R ES YD  + GH   S+S
Sbjct: 66  TPFDQLIWDVGHQAYPHKILTGRRDQMHTIRQKNGIHPFPWREESLYDVLSVGHSSTSIS 125

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           AG+G+AVA + +      V VI +G   AG A+EAM++AG L ++M+VILND+  S+   
Sbjct: 126 AGVGIAVAAEKENAGRKTVCVIGDGAITAGMAFEAMNHAGALHTDMLVILNDNEMSI--- 182

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                  ++ AL++ L+RI S   +  +R+ +K +  ++   +  +  K +E+ +G+I P
Sbjct: 183 -----SENVGALNNHLARIFSGSIYTTVRDGSKKVLDKVPT-IKNFMKKSEEHMKGVISP 236

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
           + STLFEELG  YIGP+DGHNI++L+  L  +  L   GP  +H+ T++ +  E  + ++
Sbjct: 237 E-STLFEELGFNYIGPIDGHNIDELVKTLSNMREL--KGPQFLHIRTKKGKGYEPAE-ND 292

Query: 380 AIEKQQEGASDSN--SLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLF 437
            I        D     LP      TY D F   L   AE+D  ++ +   M     +  F
Sbjct: 293 PIGYHGVPKFDPTCGQLPKSKTIPTYSDIFGNWLCEMAEQDSKLIGITPAMREGSGMVEF 352

Query: 438 QEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVR 497
            ++FPE+YFDV +AEQHAVTF AGLA  G KP   I S+FLQRAYDQ+++DV  Q LPV 
Sbjct: 353 SKRFPEQYFDVAIAEQHAVTFGAGLAIAGYKPVVAIYSSFLQRAYDQLIHDVAIQNLPVI 412

Query: 498 FVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFR 557
           F I  AG+VG+DG T  GAFD++FM C+PNM +M PSDE+E+  M+ T   + + P   R
Sbjct: 413 FAIDRAGIVGADGQTHQGAFDVSFMRCIPNMTIMCPSDENEMRQMLYTAYRM-NTPTAVR 471

Query: 558 YPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVT 617
           YPRG      L   +   +E+GKGK++ +G+ VA+L +G ++    +AR +  K   + T
Sbjct: 472 YPRGNAQGVALAPMQA--LEVGKGKLIQQGQKVAILNFGPLLN---EARIVAEKH--NYT 524

Query: 618 VADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVKWRPI 676
           +AD RF KPLD +LV EL  +H  L+T+EE +I GG GS V+ ++   G      K RP+
Sbjct: 525 LADMRFVKPLDEQLVAELADSHELLVTLEENAIQGGAGSAVNEYLQKIG------KIRPL 578

Query: 677 VL---PDNYIEHASPTQQLALAGL 697
           V+   PD ++  A+  +  A  GL
Sbjct: 579 VMLGIPDFFVPQATQAESYADLGL 602


>gi|425465970|ref|ZP_18845273.1| 1-deoxy-D-xylulose-5-phosphate synthase [Microcystis aeruginosa PCC
           9809]
 gi|389831688|emb|CCI25344.1| 1-deoxy-D-xylulose-5-phosphate synthase [Microcystis aeruginosa PCC
           9809]
          Length = 636

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 251/641 (39%), Positives = 371/641 (57%), Gaps = 29/641 (4%)

Query: 82  LDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAP 141
           L  + +P +L  L++++L+ +A +IR +    ++ T   L   L  VELT+AL+      
Sbjct: 3   LSEITHPNQLHGLSLRQLEDIARQIREKHLQTIAATGGHLGPGLGVVELTIALYQTLDLD 62

Query: 142 VDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAG 201
            DK+LWDVG Q Y HK+LTGR +  HTLR+K+GI+GY  R ES++D F AGH   S+SAG
Sbjct: 63  RDKVLWDVGHQAYPHKLLTGRYNDFHTLRQKNGIAGYLKRCESKFDHFGAGHASTSISAG 122

Query: 202 LGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPKI 260
           LGMA+ARD KG+   +V++I +G    G A EA+++AG+L ++N++VILND+  S+ P  
Sbjct: 123 LGMALARDAKGEDFKVVSIIGDGALTGGMALEAINHAGHLPNTNIMVILNDNEMSISP-- 180

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRI---GRGMHEWAAKVDEYARGMI 317
                 ++ A+S  L++++ S+  + + +  +   K +   G  +     +V E  + + 
Sbjct: 181 ------NVGAISRYLNKVRLSEPVQFIADNLEEQFKNLPFFGDSLTPEMERVKEGMKRLA 234

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQK 377
            P+   + EELG  Y GP+DGHNI +LI+  ++   +   GPV VHV T + +  E  +K
Sbjct: 235 VPKVGAVIEELGFKYFGPIDGHNIPELIATFKQAHKV--HGPVFVHVATVKGKGYEWAEK 292

Query: 378 SEAIEKQQEG---ASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
            +     Q     A+             Y   F   L   AE D  I+ + A M     L
Sbjct: 293 DQVGYHAQNPFNLATGKPIPSSKPKPPAYSKVFGHTLTKLAENDPRIIGITAAMATGTGL 352

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             FQ K P++Y DVG+AEQHAVT + GLAC G++P   I S FLQRA+DQ+++D+  Q L
Sbjct: 353 DKFQAKLPKQYIDVGIAEQHAVTLAGGLACEGMRPVVTIYSTFLQRAFDQIIHDICIQNL 412

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PV F +  AG+VG+DGPT  G +DI ++ C+PNM +MAP DE EL  MV T  +    P+
Sbjct: 413 PVFFCMDRAGIVGADGPTHQGMYDIAYLRCIPNMTIMAPKDEAELQRMVVTGINHTSGPI 472

Query: 555 CFRYPRGAIVRTDL--PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
             RYPRG  +   L   G+  +P  IGKG++L  G D+ LLGYG MV   L+   +LS+ 
Sbjct: 473 AMRYPRGNGLGVPLMEEGWEALP--IGKGEILRSGDDILLLGYGTMVNTSLQVAEILSEH 530

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSG- 670
           GI+ TV +ARF KPLD +L+  L Q    ++T+EEG + GGFGS V     L+ L D+  
Sbjct: 531 GIEATVVNARFVKPLDTELIFPLAQRLGKVVTLEEGCLMGGFGSAV-----LEALQDANI 585

Query: 671 -VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
            V  +   +PD  ++HA+P +  A  GLT   IA   L++ 
Sbjct: 586 LVPVKRFGVPDKLVDHATPEESFADLGLTSPQIAEQVLAVF 626


>gi|225077244|ref|ZP_03720443.1| hypothetical protein NEIFLAOT_02299 [Neisseria flavescens
           NRL30031/H210]
 gi|224951388|gb|EEG32597.1| hypothetical protein NEIFLAOT_02299 [Neisseria flavescens
           NRL30031/H210]
          Length = 629

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 263/649 (40%), Positives = 374/649 (57%), Gaps = 57/649 (8%)

Query: 78  PTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHV 137
           P+P+LD+++ P  L+ L  K+L Q+A E+R  L   V KT     S+L AVELTVALH+V
Sbjct: 3   PSPLLDIIDTPQDLRRLEKKQLPQVAAELREFLLDSVGKTGGHFASNLGAVELTVALHYV 62

Query: 138 FHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNS 197
           ++ P DK++WDVG Q+Y HKILTGR++ +HT+R+  G++G+  R ESEYD F  GH   S
Sbjct: 63  YNTPEDKLVWDVGHQSYPHKILTGRKNQMHTMRQYGGLAGFPKRCESEYDAFGVGHSSTS 122

Query: 198 VSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLH 257
           + A LGMAVA    G     V +I +G   AGQA+EA++ AG +D +++VILND+  S+ 
Sbjct: 123 IGAALGMAVADKQLGNNRRSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVILNDNEMSIS 182

Query: 258 PKIEESPK-------TSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVD 310
           P +   PK         ++ L ST+ + QSSK   +L             G  E A KV+
Sbjct: 183 PNVGALPKYLASNVVRDMHGLLSTI-KAQSSKVLDKL------------PGAMELAQKVE 229

Query: 311 EYARGMIG-----PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVV 365
              + + G      Q  +LFE  G  Y GPVDGHN+E+L+ VL+++   G  GP L+HV+
Sbjct: 230 NKIKTLAGEAEHAKQSLSLFENFGFRYTGPVDGHNVENLVDVLKDLR--GRKGPQLLHVI 287

Query: 366 TEEN---RRAE-DTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDI 421
           T++    + AE D  K  A+ K           P      TY   F + L  +A  D+ +
Sbjct: 288 TKKGNGYKFAENDPVKYHAVAKLPSEVPAPEVKP-AAAKPTYTQVFGQWLCDQAAADERL 346

Query: 422 VVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRA 481
           V +   M     L  F+++FP+RYFDVG+AEQHAVTF+ GLAC G+KP   I S FLQRA
Sbjct: 347 VAITPAMREGSGLVEFEQQFPDRYFDVGIAEQHAVTFAGGLACEGIKPVVAIYSTFLQRA 406

Query: 482 YDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVD 541
           YDQ+V+DV  Q LPV F +  AG+VG+DGPT  G +D++F+ C+PNMIV APSDE+E   
Sbjct: 407 YDQLVHDVALQNLPVLFAVDRAGIVGADGPTHAGLYDLSFLRCIPNMIVAAPSDENECRL 466

Query: 542 MVATVASIDDRPVCFRYPR----GAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGA 597
           +++T    +  P   RYPR    GA +   L       +EIGKG +  EG+ +A++ +G+
Sbjct: 467 LLSTCYQANS-PSAVRYPRGTGTGATISDGLE-----TVEIGKGIIRREGEKIAVIAFGS 520

Query: 598 MVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-IGGFGSH 656
           MV   L A   L     + TVAD RF KP+D +L+  L ++H +++T EE +  GG GS 
Sbjct: 521 MVAPSLTAADKL-----NATVADMRFVKPIDEELIVRLARSHDYIVTAEENAEQGGAGSA 575

Query: 657 VSHFIALDGLLDSGVKWRPIVL---PDNYIEHASPTQQLALAGLTGHHI 702
           V   +A  G+       +P++L    D   EH  P + LA  GL    +
Sbjct: 576 VLEVLAKHGIC------KPVLLLGVEDKVTEHGDPKKLLADLGLNAEAV 618


>gi|289578294|ref|YP_003476921.1| deoxyxylulose-5-phosphate synthase [Thermoanaerobacter italicus
           Ab9]
 gi|289528007|gb|ADD02359.1| deoxyxylulose-5-phosphate synthase [Thermoanaerobacter italicus
           Ab9]
          Length = 620

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 251/643 (39%), Positives = 378/643 (58%), Gaps = 32/643 (4%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L+ +++P  LK L  K+   L  EIR  L   VSKT   L S+L  VELT+ALH+VF +
Sbjct: 1   MLEQIDSPYDLKKLDKKDFLLLCREIRQFLIEKVSKTGGHLASNLGIVELTIALHYVFDS 60

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           PVDKI+WDVG Q Y HK+LTGR+    TLRK +G+SG+T R+ES +D F AGH   S+SA
Sbjct: 61  PVDKIIWDVGHQCYVHKMLTGRKDQFDTLRKFNGLSGFTKRAESVHDVFGAGHSSTSISA 120

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKI 260
            LG+A ARD+KG++  +V VI +G    G A EA+++AG  ++N+IV+LN +  S+    
Sbjct: 121 ALGIAKARDLKGEKYSVVAVIGDGALTGGMALEALNDAGRSETNLIVVLNHNEMSI---- 176

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTK---RIGRGMHEWAAKVDEYARGMI 317
                 ++ +LS  LS++++  ++ +L++    +      IG+ +H++  K+ +  + ++
Sbjct: 177 ----SENVGSLSLYLSKLRTDPTYNKLKQEVDNLLNIAPPIGKSLHKYIEKIKDSVKQLV 232

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQK 377
            P     FEE+G  Y+GP+DGH++  LI VL+    +   GP+L+HVVT++ +  +  +K
Sbjct: 233 VP--GMFFEEMGFTYLGPIDGHDVGGLIEVLERAKRM--KGPILIHVVTKKGKGYKFAEK 288

Query: 378 SEAIEKQQEGAS-DSNSLPFGNYSR-TYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQ 435
               EK    A  D  +  F N  + TY D F + L   A KD +IV + A M     L 
Sbjct: 289 FP--EKFHSAAPFDIQTGKFVNEEQETYSDVFGKTLTEMALKDDEIVAITAAMPEGTGLI 346

Query: 436 LFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLP 495
            F +  PER+FDVG+AEQHA TF+AG+A  G KP+  + S FLQRAYDQ+++DV  Q+LP
Sbjct: 347 HFAKLIPERFFDVGIAEQHATTFAAGMAVQGYKPYFAVYSTFLQRAYDQIIHDVCIQKLP 406

Query: 496 VRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVC 555
           V F I  AG+VG DG T  G FD++++  +PN+ +M+P D +ELV+M+    ++ D PV 
Sbjct: 407 VVFAIDRAGIVGEDGETHQGVFDLSYLRPIPNIAIMSPKDANELVEMIKLSRNL-DFPVA 465

Query: 556 FRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGID 615
            RYPRG   + D+   R   IE GK +++ EGK++A+   G MV+  LKA+ +L    + 
Sbjct: 466 IRYPRGKAGKFDIT--RECSIEFGKAELVCEGKEIAIFALGRMVEKALKAKEILKASDLQ 523

Query: 616 VTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVKWR 674
             + + RF KPLD +L+ ++     F++TVE+  I GG GS      A+  LL+S    +
Sbjct: 524 PFIVNLRFVKPLDEELILDISNKVKFIVTVEDNVIVGGVGS------AILELLNSTGIHK 577

Query: 675 PIV---LPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTR 714
           P++    PD +IE            L    IA T L      R
Sbjct: 578 PVLRLGFPDKFIEQGDVESLFKKYNLDAESIANTILQKYKEMR 620


>gi|121593454|ref|YP_985350.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidovorax sp. JS42]
 gi|166198592|sp|A1W4U9.1|DXS_ACISJ RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|120605534|gb|ABM41274.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidovorax sp. JS42]
          Length = 629

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 261/626 (41%), Positives = 375/626 (59%), Gaps = 36/626 (5%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+L+ V +P  L+ L   ELK LA E+R+ +   VSKT   L S+L  VELTVALH VF 
Sbjct: 7   PLLERVNDPADLRRLPRAELKTLAHELRAFVLESVSKTGGHLSSNLGTVELTVALHAVFD 66

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG QTY HKILTGRR  + +LR+  G+SG+  R+ESEYD F   H   S+S
Sbjct: 67  TPRDRLVWDVGHQTYPHKILTGRRDRMPSLRQLGGLSGFPQRAESEYDTFGTAHSSTSIS 126

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           A LGMA+A   +G     V +I +G   AG A+EA++NAG  D+N++VILND+  S+ P 
Sbjct: 127 AALGMALAAKQRGDERRCVAIIGDGAMTAGMAFEALNNAGVADANLLVILNDNDMSISP- 185

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                   + AL+  L+++ S + + + R++ K + K     + E A ++++ A+GM+ P
Sbjct: 186 -------PVGALNRYLAQLMSGQFYAKARDMGKSVLKN-APPLLELAKRLEQQAKGMVVP 237

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             +TLFE+ G  YIGP+DGH+++ LI  L+ +  L   GP  +HVVT++  +     +++
Sbjct: 238 --ATLFEKFGFNYIGPIDGHDLDSLIPTLENIRGL--KGPQFLHVVTKKG-QGYKLAEAD 292

Query: 380 AIEKQQEGASDSN---SLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQL 436
            +     G  D       P     +T+   F + L   A+KDK +V +   M     +  
Sbjct: 293 PVAYHGPGKFDPRVGLVKPATPPKQTFTQVFGQWLCDMADKDKRLVGITPAMREGSGMVE 352

Query: 437 FQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPV 496
           F ++FP+RY+DVG+AEQHAVTF+AG+AC G+KP   I S FLQRAYDQ+++DV  Q LPV
Sbjct: 353 FHQRFPDRYYDVGIAEQHAVTFAAGMACEGVKPVVAIYSTFLQRAYDQLIHDVALQNLPV 412

Query: 497 RFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCF 556
            F +  AGLVG+DG T  GA+DI F+ C+P+M +  P+DE E   ++ T A   D PV  
Sbjct: 413 VFALDRAGLVGADGATHAGAYDIAFVRCIPHMSMACPADERECRQLL-TTAYEQDHPVAV 471

Query: 557 RYPRGAIVR-TDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGID 615
           RYPRGA V    LP   G+P   GKG+V   G+ +A+L +G ++   L+A   L      
Sbjct: 472 RYPRGAGVGVAPLPDLEGLP--FGKGEVRRTGQRIAILAFGTLLYPALQAAQALDA---- 525

Query: 616 VTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVKWR 674
            TV + R+ KPLD +L+ ++   H  L+TVEEG I GG GS V+  +A  GL       R
Sbjct: 526 -TVVNMRWAKPLDTQLLLQVAAEHDALVTVEEGCIMGGAGSAVAEALAAAGL------QR 578

Query: 675 PIV---LPDNYIEHASPTQQLALAGL 697
           P++   LPD +IEH  P + LAL GL
Sbjct: 579 PLLQLGLPDVFIEHGDPAKLLALQGL 604


>gi|52425114|ref|YP_088251.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mannheimia
           succiniciproducens MBEL55E]
 gi|81609544|sp|Q65TP4.1|DXS_MANSM RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|52307166|gb|AAU37666.1| Dxs protein [Mannheimia succiniciproducens MBEL55E]
          Length = 617

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 252/620 (40%), Positives = 366/620 (59%), Gaps = 27/620 (4%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+L L+ +P  L+ L   +L Q+  E+R  L   VS+T   L S L  VELTVALH++F 
Sbjct: 5   PLLSLINSPEDLRLLNKDQLPQVCNELREYLLESVSRTSGHLASGLGTVELTVALHYIFK 64

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG Q Y HKILTGRR  + T+R+KDGI  +  R ESE+D  + GH   S+S
Sbjct: 65  TPFDQLIWDVGHQAYPHKILTGRRERMTTIRQKDGIHPFPWREESEFDVLSVGHSSTSIS 124

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           AGLG+A+A + +     I+ VI +G   AG A+EAM++AG L ++M+VILND+  S+   
Sbjct: 125 AGLGIAIAAEKENAGRKIICVIGDGAITAGMAFEAMNHAGALHTDMLVILNDNEMSI--- 181

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                  ++  L++ L+RI S   +  LR+ +K +   +   +  +  K +E+ +G+I P
Sbjct: 182 -----SENVGGLNNHLARIFSGSIYSSLRDSSKKILDTM-PPIKNFMKKTEEHMKGVISP 235

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             STLFEELG  YIGP+DGHNIE+LI+ L  + +L   GP  +H+ T++ +     ++  
Sbjct: 236 I-STLFEELGFNYIGPIDGHNIEELIATLSNMKTL--KGPQFLHIRTKKGKGYTPAEQDP 292

Query: 380 -AIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQ 438
                  +    +  LP    + TY   F E L   AE+D+ ++ +   M     +  F 
Sbjct: 293 IGFHGVPKFDYHTGQLPKSTATPTYSQIFGEWLCETAEQDEKLIGITPAMREGSGMVEFS 352

Query: 439 EKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRF 498
            +FP++YFDV +AEQHAVT +AGLA GG KP   I S FLQRAYDQV++DV  Q LPV F
Sbjct: 353 NRFPDQYFDVAIAEQHAVTLAAGLAIGGYKPVVAIYSTFLQRAYDQVIHDVAIQNLPVLF 412

Query: 499 VITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRY 558
            I  AG+VG+DGPT  GAFD++F+ C+PN+I+MAPS+E+E   M+ T      +P   RY
Sbjct: 413 AIDRAGIVGADGPTHQGAFDLSFLRCIPNLIIMAPSNENECRLMLHT-GYCCGKPAAVRY 471

Query: 559 PRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTV 618
           PRG  +  +L   R   +EIGK  ++ +G+D+A+L +G ++ N L     L     + TV
Sbjct: 472 PRGNAIGVELEPLR--KLEIGKSNLVRQGQDIAILNFGTLLPNALDVAEKL-----NATV 524

Query: 619 ADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVKWRPIV 677
            D RF KPLD + + EL + H  L+T+EE +I GG GS VS  + +       V    + 
Sbjct: 525 VDMRFVKPLDHERINELAKTHRTLVTLEENTIQGGAGSAVSEVVNIQ---QHHVNILHLG 581

Query: 678 LPDNYIEHASPTQQLALAGL 697
           LPD ++  A  TQQ  L  L
Sbjct: 582 LPDEFV--AQGTQQEVLKEL 599


>gi|428209085|ref|YP_007093438.1| 1-deoxy-D-xylulose-5-phosphate synthase [Chroococcidiopsis
           thermalis PCC 7203]
 gi|428011006|gb|AFY89569.1| 1-deoxy-D-xylulose-5-phosphate synthase [Chroococcidiopsis
           thermalis PCC 7203]
          Length = 636

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 257/643 (39%), Positives = 370/643 (57%), Gaps = 43/643 (6%)

Query: 82  LDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAP 141
           L  + +P +L  L+I++L+Q+A +IR +    ++ +   L   L  VELT+AL+      
Sbjct: 3   LSEITHPNQLHGLSIRQLQQIARQIREKHLQTIAASGGHLGPGLGVVELTLALYQTLDLD 62

Query: 142 VDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAG 201
            DK++WDVG Q Y HK++TGR S  HTLR+KDG++GY  R ES++D F AGH   S+SA 
Sbjct: 63  RDKVIWDVGHQAYPHKLITGRYSEFHTLRQKDGVAGYLKRCESKFDHFGAGHASTSISAA 122

Query: 202 LGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPKI 260
           LGMA+ARD+KG +  +  +I +G    G A EA+++AG+L  +N++VILND+  S+ P  
Sbjct: 123 LGMALARDLKGDKFKVAAIIGDGALTGGMALEAINHAGHLPKTNLLVILNDNEMSISP-- 180

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRI---GRGM----HEWAAKVDEYA 313
                 ++ A+S  L++++ S   + L +  +   K I   G  +    H     +   A
Sbjct: 181 ------NVGAISRYLNKMRLSAPVQFLADNLEEQVKHIPFVGESLTPELHRLKGGMKRLA 234

Query: 314 RGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAE 373
              +G     + EELG  Y+GPVDGHN+ +LI+  ++   +   GPVLVHV T + +  E
Sbjct: 235 VSKVG----AIIEELGFTYLGPVDGHNLAELIATFEQAHHI--QGPVLVHVATVKGKGYE 288

Query: 374 DTQKSEAIEKQQE------GASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAG 427
             +K +     Q       G +  +S P       Y   F   LV  AE +  I+ + A 
Sbjct: 289 IAEKDQVGYHAQSPFDLTTGKAIPSSKP---KPPGYSKVFAHTLVKLAENNPKIIGITAA 345

Query: 428 MEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVN 487
           M     L     K P++Y DVG+AEQHAVT  AGLAC G++P   I S FLQRAYDQ+V+
Sbjct: 346 MATGTGLDKLASKLPKQYVDVGIAEQHAVTLGAGLACEGMRPVVAIYSTFLQRAYDQIVH 405

Query: 488 DVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVA 547
           DV  Q LPV F +  AG+VGSDGPT  G +DI ++ CLPNM++MAP DE EL  MV T  
Sbjct: 406 DVCIQNLPVFFCMDRAGIVGSDGPTHQGMYDIAYLRCLPNMVLMAPKDEAELQQMVVTGV 465

Query: 548 SIDDRPVCFRYPRGAIVRTDL--PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKA 605
           +  D P+  RYPRG      L   G+  +P  IGKG++L  G D+ L+G+GAMV   ++ 
Sbjct: 466 NYTDGPIAMRYPRGNGYGVPLMEEGWESLP--IGKGEILRHGDDLLLIGFGAMVHPAMQV 523

Query: 606 RALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALD 664
             +L + GI+ TV +ARF KPLD +L+  L Q    ++T+EEG + GGFGS V+     +
Sbjct: 524 AEILREHGIEATVINARFAKPLDTELILPLAQQIGRVVTLEEGCLMGGFGSAVA-----E 578

Query: 665 GLLDSG--VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAAT 705
            LLD+   V  + I +PD  ++HA P +  A  GLT   IA T
Sbjct: 579 ALLDANVVVPVKRIGIPDTLVDHAEPNESKADLGLTSPQIAET 621


>gi|425435295|ref|ZP_18815752.1| 1-deoxy-D-xylulose-5-phosphate synthase [Microcystis aeruginosa PCC
           9432]
 gi|440754933|ref|ZP_20934135.1| 1-deoxy-D-xylulose-5-phosphate synthase [Microcystis aeruginosa
           TAIHU98]
 gi|389680224|emb|CCH91104.1| 1-deoxy-D-xylulose-5-phosphate synthase [Microcystis aeruginosa PCC
           9432]
 gi|440175139|gb|ELP54508.1| 1-deoxy-D-xylulose-5-phosphate synthase [Microcystis aeruginosa
           TAIHU98]
          Length = 636

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 251/639 (39%), Positives = 369/639 (57%), Gaps = 29/639 (4%)

Query: 82  LDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAP 141
           L  + +P +L  L++++L+ +A +IR +    ++ T   L   L  VELT+AL+      
Sbjct: 3   LSEITHPNQLHGLSLRQLEDIARQIREKHLQTIAATGGHLGPGLGVVELTIALYQTLDLD 62

Query: 142 VDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAG 201
            DK+LWDVG Q Y HK+LTGR +  HTLR+K+G++GY  R ES++D F AGH   S+SAG
Sbjct: 63  RDKVLWDVGHQAYPHKLLTGRYNDFHTLRQKNGVAGYLKRCESKFDHFGAGHASTSISAG 122

Query: 202 LGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPKI 260
           LGMA+ARD KG+   +V++I +G    G A EA+++AG+L ++N++VILND+  S+ P  
Sbjct: 123 LGMALARDAKGEDFKVVSIIGDGALTGGMALEAINHAGHLPNTNIMVILNDNEMSISP-- 180

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRI---GRGMHEWAAKVDEYARGMI 317
                 ++ A+S  L++++ S+  + + +  +   K +   G  +     +V E  + + 
Sbjct: 181 ------NVGAISRYLNKVRLSEPVQFIADNLEEQLKHLPFFGDSLTPEMERVKEGMKRLA 234

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQK 377
            P+   + EELG  Y GP+DGHNI +LI+  ++   +   GPV VHV T + +  E  +K
Sbjct: 235 VPKVGAVIEELGFKYFGPIDGHNIPELIATFKQAHKV--QGPVFVHVATVKGKGYEWAEK 292

Query: 378 SEAIEKQQEG---ASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
            +     Q     A+             Y   F   L   AE D  I+ + A M     L
Sbjct: 293 DQVGYHAQNPFNLATGKPIPSSKPKPPAYSKVFGHTLTKLAENDPRIIGITAAMATGTGL 352

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             FQ K P++Y DVG+AEQHAVT + GLAC G++P   I S FLQRA+DQ+++D+  Q L
Sbjct: 353 DKFQAKLPKQYIDVGIAEQHAVTLAGGLACEGMRPVVTIYSTFLQRAFDQIIHDICIQNL 412

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PV F +  AG+VG+DGPT  G +DI ++ C+PNM +MAP DE EL  MV T  +    P+
Sbjct: 413 PVFFCMDRAGIVGADGPTHQGMYDIAYLRCIPNMTIMAPKDEAELQRMVVTGINHTSGPI 472

Query: 555 CFRYPRGAIVRTDL--PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
             RYPRG  +   L   G+  +P  IGKG++L  G DV LLGYG MV   L+   +LS+ 
Sbjct: 473 AMRYPRGNGLGVPLMEEGWEALP--IGKGEILRSGDDVLLLGYGTMVNTSLQVAEILSEH 530

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSG- 670
           GI+ TV +ARF KPLD +L+  L Q    ++T+EEG + GGFGS V     L+ L D+  
Sbjct: 531 GIEATVVNARFVKPLDTELIFPLAQRLGKVVTLEEGCLMGGFGSAV-----LEALQDANI 585

Query: 671 -VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALS 708
            V  +   +PD  ++HA P +  A  GLT   IA   L+
Sbjct: 586 LVPVKRFGVPDKLVDHAKPEESFADLGLTSPQIAQQVLA 624


>gi|409990170|ref|ZP_11273586.1| 1-deoxy-D-xylulose-5-phosphate synthase [Arthrospira platensis str.
           Paraca]
 gi|291569715|dbj|BAI91987.1| 1-deoxy-D-xylulose-5-phosphate synthase [Arthrospira platensis
           NIES-39]
 gi|409938971|gb|EKN80219.1| 1-deoxy-D-xylulose-5-phosphate synthase [Arthrospira platensis str.
           Paraca]
          Length = 638

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 253/635 (39%), Positives = 368/635 (57%), Gaps = 31/635 (4%)

Query: 82  LDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAP 141
           L  + +P +L  L+I EL+++A +IR +    V+ T   L   L  VELT+ L+      
Sbjct: 3   LSELTHPNQLHGLSIHELEEVAQQIREKHLETVAATGGHLGPGLGVVELTLGLYQTLDLD 62

Query: 142 VDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAG 201
            DK++WDVG Q Y HK++TGR +  +TLR+KDG++GY  R ES +D F AGH   S+SA 
Sbjct: 63  RDKVIWDVGHQAYPHKMITGRYNNFNTLRQKDGVAGYLKRCESRFDHFGAGHASTSISAA 122

Query: 202 LGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPKI 260
           LGMA+ARD++G    +V +I +G    G A EA+++AG+L ++N++V+LND+  S+ P +
Sbjct: 123 LGMALARDMQGDNYKVVAIIGDGAMTGGMALEAINHAGHLPNTNLMVVLNDNEMSISPNV 182

Query: 261 EESPK-TSINALSSTLSRIQSS--KSFRQLREVAKGMT---KRIGRGMHEWAAKVDEYAR 314
              P+  +   LS  +  ++ +  + F+Q+  V +  T   +R+  GM   A        
Sbjct: 183 GAIPRYLNKMRLSPPVQFLKDNLREQFKQIPFVGENFTPEMERLKEGMKRLAV------- 235

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAED 374
               P+   + EELG  YIGPVDGHN+EDLI   Q+   +   GPV+VHV T + +    
Sbjct: 236 ----PKLGAIIEELGFTYIGPVDGHNLEDLIETFQQAHEI--KGPVMVHVSTVKGKGYAI 289

Query: 375 TQKSEAIEKQQE--GASDSNSLPFGN-YSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMD 431
            +K +     Q     +   ++P       +Y   F + L+  AE +  I+ + A M   
Sbjct: 290 AEKDQVGYHAQSPFNLATGKAIPSNKPKPPSYSKVFADTLIKLAEDNPKILGITAAMATG 349

Query: 432 LSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQ 491
             L   Q K P++Y DVG+AEQHAVT +AGLAC G++P   I S FLQRAYDQ+++DV  
Sbjct: 350 TGLDKLQAKLPQQYIDVGIAEQHAVTLAAGLACEGMRPVVAIYSTFLQRAYDQIIHDVCI 409

Query: 492 QRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDD 551
           Q+LPV F +  AG+VG DGPT  G +DI ++ CLPNM +MAP DE EL  M+ T  + + 
Sbjct: 410 QKLPVFFCLDRAGIVGVDGPTHQGMYDIAYLRCLPNMTIMAPKDEAELQRMLVTGINHNS 469

Query: 552 RPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSK 611
             +  RYPRG+     L      PI IGKG++L +G D+ LLGYG MV + ++   +LS+
Sbjct: 470 GAIAMRYPRGSGHGVPLMEEGWEPIAIGKGEILRQGDDILLLGYGTMVHSAMQVAEILSE 529

Query: 612 LGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSG 670
            GID TV +ARF KPLD +L+  L Q    ++T+EEG I GGFGS V+     + LLD  
Sbjct: 530 HGIDATVVNARFVKPLDTELIVPLAQKIGKVVTLEEGCIMGGFGSAVA-----EALLDHD 584

Query: 671 --VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIA 703
             V  +   +PD  ++HA+P Q     GLT   IA
Sbjct: 585 VLVPVKRFGIPDQLVDHATPDQSKVDLGLTSSQIA 619


>gi|307260666|ref|ZP_07542358.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
 gi|306869743|gb|EFN01528.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
          Length = 639

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 254/624 (40%), Positives = 375/624 (60%), Gaps = 33/624 (5%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+L  + +P  L+ L  ++L+ +A E+R+ L   VS+T   L S L  VELTVALH+V+ 
Sbjct: 6   PLLSQINSPEDLRLLAKEQLQSVADELRAYLLESVSQTSGHLASGLGVVELTVALHYVYQ 65

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG Q Y HKILTGRR  +HT+R+K+GI  +  R ES YD  + GH   S+S
Sbjct: 66  TPFDQLIWDVGHQAYPHKILTGRRDQMHTIRQKNGIHPFPWREESLYDVLSVGHSSTSIS 125

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           AG+G+AVA + +      V VI +G   AG A+EAM++AG L ++M+VILND+  S+   
Sbjct: 126 AGVGIAVAAEKENAGRKTVCVIGDGAITAGMAFEAMNHAGALHTDMLVILNDNEMSI--- 182

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                  ++ AL++ L+RI S   +  +R+ +K +  ++   +  +  K +E+ +G+I P
Sbjct: 183 -----SENVGALNNHLARIFSGSIYTTVRDGSKKVLDKVPT-IKNFMKKSEEHMKGVISP 236

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
           + STLFEELG  YIGP+DGHNI++L+  L  +  L   GP  +H+ T++ +  E  + ++
Sbjct: 237 E-STLFEELGFNYIGPIDGHNIDELVKTLSNMREL--KGPQFLHIRTKKGKGYEPAE-ND 292

Query: 380 AIEKQQEGASDSN--SLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLF 437
            I        D     LP      TY D F   L   AE+D  ++ +   M     +  F
Sbjct: 293 PIGYHGVPKFDPTCGQLPKSKTIPTYSDIFGNWLCEMAEQDSKLIGITPAMREGSGMVEF 352

Query: 438 QEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVR 497
            ++FPE+YFDV +AEQHAVTF AGLA  G KP   I S+FLQRAYDQ+++DV  Q LPV 
Sbjct: 353 SKRFPEQYFDVAIAEQHAVTFGAGLAIAGYKPVVAIYSSFLQRAYDQLIHDVAIQNLPVI 412

Query: 498 FVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFR 557
           F I  AG+VG+DG T  GAFD++FM C+PNM +M PSDE+E+  M+ T   + + P   R
Sbjct: 413 FAIDRAGIVGADGQTHQGAFDVSFMRCIPNMTIMCPSDENEMRQMLYTAYRM-NTPTAVR 471

Query: 558 YPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVT 617
           YPRG      L   +   +E+GKGK++ +G+ VA+L +G ++    +AR +  K   + T
Sbjct: 472 YPRGNAQGVALAPMQA--LEVGKGKLIQQGQKVAILNFGPLLN---EARIVAEKH--NYT 524

Query: 618 VADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVKWRPI 676
           +AD RF KPLD +LV EL  +H  L+T+EE +I GG GS V+ ++   G      K RP+
Sbjct: 525 LADMRFVKPLDEQLVAELADSHELLVTLEENAIQGGAGSAVNEYLQKIG------KIRPL 578

Query: 677 VL---PDNYIEHASPTQQLALAGL 697
           V+   PD ++  A+  +  A  GL
Sbjct: 579 VMLGIPDFFVPQATQAESYADLGL 602


>gi|319639352|ref|ZP_07994103.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria mucosa C102]
 gi|317399536|gb|EFV80206.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria mucosa C102]
          Length = 629

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 264/646 (40%), Positives = 371/646 (57%), Gaps = 51/646 (7%)

Query: 78  PTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHV 137
           P+P+LD+++ P  L+ L  K+L Q+A E+R  L   V KT     S+L AVELTVALH+V
Sbjct: 3   PSPLLDIIDTPQDLRRLEKKQLPQVAAELREFLLDSVGKTGGHFASNLGAVELTVALHYV 62

Query: 138 FHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNS 197
           +  P D ++WDVG Q+Y HKILTGR++ +HT+R+  G++G+  RSESEYD F  GH   S
Sbjct: 63  YDTPEDHLVWDVGHQSYPHKILTGRKNQMHTMRQYGGLAGFPKRSESEYDAFGVGHSSTS 122

Query: 198 VSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLH 257
           + A LGMAVA    G     V +I +G   AGQA+EA++ AG +D +++VILND+  S+ 
Sbjct: 123 IGAALGMAVADKQLGNNRRSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVILNDNEMSIS 182

Query: 258 PKIEESPK-------TSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVD 310
           P +   PK         ++ L ST+ + QSSK   +L             G  E A KV+
Sbjct: 183 PNVGALPKYLASNVVRDMHGLLSTI-KAQSSKVLDKL------------PGAMELAQKVE 229

Query: 311 EYARGMIG-----PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVV 365
              + + G      Q  +LFE  G  Y GPVDGHN+E+L+ VL+++   G  GP L+HV+
Sbjct: 230 NKIKTLAGEAEHAKQSLSLFENFGFRYTGPVDGHNVENLVDVLKDLR--GRKGPQLLHVI 287

Query: 366 TEEN---RRAE-DTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDI 421
           T++    + AE D  K  A+ K           P      TY   F + L  +A  D+ +
Sbjct: 288 TKKGNGYKFAENDPVKYHAVAKLPSEVPAPEVKP-AAAKPTYTQVFGQWLCDQATADERL 346

Query: 422 VVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRA 481
           V +   M     L  F+ +FP+RYFDVG+AEQHAVTF+ GLAC G+KP   I S FLQRA
Sbjct: 347 VAITPAMREGSGLVEFEHQFPDRYFDVGIAEQHAVTFAGGLACEGIKPVVAIYSTFLQRA 406

Query: 482 YDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVD 541
           YDQ+V+DV  Q LPV F I  AG+VG+DGPT  G +D++F+ C+PNMI+  PSDE+E   
Sbjct: 407 YDQLVHDVALQNLPVLFAIDRAGIVGADGPTHAGLYDLSFLRCVPNMIIATPSDENECRL 466

Query: 542 MVATVASIDDRPVCFRYPRG-AIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQ 600
           +++T    +  P   RYPRG     T L G     +EIGKG +  EGK +A++ +G+MV 
Sbjct: 467 LLSTCYQANS-PSAVRYPRGTGTGATVLDGLE--TVEIGKGIIRREGKKIAVIAFGSMVA 523

Query: 601 NCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-IGGFGSHVSH 659
             L A   L     + TVAD RF KP+D +L+  L ++H +++T EE +  GG GS V  
Sbjct: 524 PSLAAADKL-----NATVADMRFVKPIDEELIVRLARSHDYIVTAEENAEQGGAGSAVLE 578

Query: 660 FIALDGLLDSGVKWRPIVL---PDNYIEHASPTQQLALAGLTGHHI 702
            +A  G+       +P++L    D   EH  P + LA  GL    +
Sbjct: 579 VLAKHGIC------KPVLLLGVEDKVTEHGDPKKLLADLGLNAEAV 618


>gi|254877030|ref|ZP_05249740.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella philomiragia
           subsp. philomiragia ATCC 25015]
 gi|254843051|gb|EET21465.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella philomiragia
           subsp. philomiragia ATCC 25015]
          Length = 618

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 255/636 (40%), Positives = 369/636 (58%), Gaps = 25/636 (3%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           ILD +  P  LK +   +LK+LA E+R+ L   +  +     SSL A ELTVALH+VF+ 
Sbjct: 6   ILDKINTPADLKLVPEGQLKELASELRTFLVDTLDVSGGHFASSLGATELTVALHYVFNT 65

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D I+WDVG QTY HKILTGR+  + T++K  GISG+  RSESEYD F  GH   S+SA
Sbjct: 66  PYDNIVWDVGHQTYIHKILTGRKDKLITIKKDGGISGFPKRSESEYDTFGVGHSSTSISA 125

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKI 260
            LGMA+A  ++GK    + VI +G    G A+EA+++AG +  +++VILND+        
Sbjct: 126 ALGMAIADRLQGKHSSSIAVIGDGAITGGMAFEALNHAGGIKEDILVILNDN-------- 177

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQ 320
           E S   ++  LS+  S+I S   +  +RE  K + K I   M E+  K++   +GM  P 
Sbjct: 178 EMSISDNVGGLSAHFSKIISGGFYNSIREKGKEVLKNI-PPMFEFVKKIETQTKGMFVP- 235

Query: 321 GSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSEA 380
            +  FE+LG YY+GP+DGHN+ +L+  L+ +      GP L+HV+T++ +     + S+ 
Sbjct: 236 -ANFFEDLGFYYVGPIDGHNVVELVKTLRILKD--HKGPKLLHVITKKGKGYTKAE-SDP 291

Query: 381 IEKQQEGASDSNSLPFGNYSR-TYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQE 439
           I+      S  +       S+ TY + F   +  +A KD+ +V V   M+    L  F +
Sbjct: 292 IKFHHVAPSFHSGDAQSKASKPTYSNIFGNWICQKAAKDERLVGVTPAMKEGSDLIRFSQ 351

Query: 440 KFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFV 499
           ++P RYFDV +AEQHAVTF+ GLAC GLKP   I S FLQRAYDQV++DV  Q L + + 
Sbjct: 352 QYPNRYFDVAIAEQHAVTFAGGLACQGLKPVVAIYSTFLQRAYDQVIHDVALQDLDILYA 411

Query: 500 ITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYP 559
           +  AGLVG+DG T  G+FDI+FM C+PN ++M PSDE+E   M+  +      P   RYP
Sbjct: 412 VDRAGLVGADGATHDGSFDISFMRCIPNHVIMTPSDENETYHML-ELGYEYKGPAMVRYP 470

Query: 560 RGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVA 619
           RGA   TD      + +E+GK K++ +G  VA+L +G ++     A  L  K   D+TV 
Sbjct: 471 RGA--GTDAEITDNLDMELGKAKLVKKGSRVAILNFGTLLP---LANQLADKY--DITVV 523

Query: 620 DARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVKWRPIVL 678
           D RF KPLD +++ E+CQNH  + T+EE SI GG GS V+ +I  +  L   +  R   L
Sbjct: 524 DMRFVKPLDEQMIDEICQNHNIIFTLEENSIAGGAGSAVNEYIFAND-LSKNITVRNFGL 582

Query: 679 PDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTR 714
            D ++ H +    L  + L+ + IA     LL   +
Sbjct: 583 KDEFLTHGTKDLLLDYSNLSFNKIAEVLEKLLSHKK 618


>gi|345017601|ref|YP_004819954.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thermoanaerobacter
           wiegelii Rt8.B1]
 gi|344032944|gb|AEM78670.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thermoanaerobacter
           wiegelii Rt8.B1]
          Length = 620

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 249/643 (38%), Positives = 377/643 (58%), Gaps = 32/643 (4%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L+ + +P  LK +  K+   L  EIR  L   VSKT   L S+L  VELTVALH+VF++
Sbjct: 1   MLEQINSPYDLKKIDKKDFPLLCEEIRQFLIEKVSKTGGHLASNLGIVELTVALHYVFNS 60

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           PVDKI+WDVG Q Y HKI+TGR+    TLRK +G+SGYT R+ES +D F AGH   S+SA
Sbjct: 61  PVDKIIWDVGHQCYVHKIITGRKDQFDTLRKFNGLSGYTKRTESVHDIFGAGHSSTSISA 120

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKI 260
            LG+A ARD+KG++  +V VI +G    G A+EA++NAG   +++IV+LN +  S+    
Sbjct: 121 ALGIAKARDLKGEKYSVVAVIGDGALTGGMAFEALNNAGRSKTDLIVVLNHNEMSI---- 176

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTK---RIGRGMHEWAAKVDEYARGMI 317
                 ++ +LS  LS++++  ++ +L++    +      IG+ +H++  ++ +  + ++
Sbjct: 177 ----SENVGSLSLYLSKLRTDPTYNKLKQEVDNLLNIVPPIGKSLHKYIERIKDSVKQLV 232

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQK 377
            P     FEE+G  Y+GP+DGH+++ LI VL+    +   GP+LVHV+T++ +  +  +K
Sbjct: 233 VP--GMFFEEMGFTYLGPIDGHDVDSLIEVLERAKKI--KGPILVHVITKKGKGYKFAEK 288

Query: 378 SEAIEKQQEGAS-DSNSLPFGNYSR-TYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQ 435
               +K    A  D  +  F N  + TY D F + L   A KD  IV + A M     L 
Sbjct: 289 FP--DKFHSAAPFDIQTGKFVNEGQATYSDVFGKTLTEMALKDDKIVAITAAMPEGTGLI 346

Query: 436 LFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLP 495
            F +  PER+FDVG+AEQHA TF+AG+A  G KP+  + S FLQRAYDQ+++DV  Q+LP
Sbjct: 347 HFAKLIPERFFDVGIAEQHATTFAAGMAVQGYKPYFAVYSIFLQRAYDQLIHDVCIQKLP 406

Query: 496 VRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVC 555
           V F I  AG+VG DG T  G FD++++  +PN+ +M+P D +ELV+MV    ++ D PV 
Sbjct: 407 VVFAIDRAGIVGEDGETHQGVFDLSYLRPIPNIAIMSPKDANELVEMVKLSRNL-DFPVA 465

Query: 556 FRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGID 615
            RYPRG     D+   R   IE GK +++ EG ++A+   G MV   L+A+ +L    + 
Sbjct: 466 IRYPRGKAGEFDIT--RECSIEFGKAELISEGTEIAIFALGRMVGKVLEAKEILKASDLQ 523

Query: 616 VTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVKWR 674
             + + RF KP+D +L+ ++     F++TVE+  I GG GS      A+  LL+S   ++
Sbjct: 524 PFIVNLRFVKPVDEELIFDISNKVKFIVTVEDNVIAGGVGS------AILELLNSNGIYK 577

Query: 675 PIV---LPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTR 714
           P++    PD +IEH           L    IA T L      R
Sbjct: 578 PVLRLGFPDKFIEHGDVENLFKKYNLDAESIANTILQKYKEMR 620


>gi|302879473|ref|YP_003848037.1| deoxyxylulose-5-phosphate synthase [Gallionella capsiferriformans
           ES-2]
 gi|302582262|gb|ADL56273.1| deoxyxylulose-5-phosphate synthase [Gallionella capsiferriformans
           ES-2]
          Length = 613

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 255/631 (40%), Positives = 371/631 (58%), Gaps = 49/631 (7%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +LD ++ P  L++L+ ++L QLA E+R  L   VSKT   L S+L  VELT+ALH VF+ 
Sbjct: 4   LLDTIDTPEALRALSREQLPQLARELREFLVESVSKTGGHLSSNLGTVELTIALHTVFNT 63

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+++WDVG QTY HKILTGRR+ +  LR + GI+G+  R ES YD F  GH   S+SA
Sbjct: 64  PEDRLVWDVGHQTYVHKILTGRRAAMSGLRMEGGIAGFPKREESPYDTFGTGHSSTSISA 123

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKI 260
            LGMAVA  + G     V +I +G    G A+EA++NAG +++N++VILND+  S+    
Sbjct: 124 ALGMAVAAQLSGSARRSVAIIGDGAMTGGMAFEALNNAGAMNANLLVILNDNDMSI---- 179

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLR----EVAKGMTKRIGRGMHEWAAKVDEYARGM 316
                  + AL++ L+++ S + +  +R    +V KGM   +     E+A + +E+ +GM
Sbjct: 180 ----SRPVGALNNYLAKLMSGRFYAAMRRGSEKVLKGMPPVL-----EFAKRAEEHVKGM 230

Query: 317 IGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQ 376
           + P   T+FEE G  YIGP+DGH++  LI  L  +  L   GP  +HVVT++ +     +
Sbjct: 231 VIP--GTMFEEFGFNYIGPIDGHDLNALIDTLSNIRQL--EGPQFLHVVTQKGKGYTLAE 286

Query: 377 KSEAIEKQQEGASDSNSL---PFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
           +   +         +N +   P GN S  Y   F + L   A +D  +V +   M     
Sbjct: 287 EDCLLYHGVSKFDRTNGIVPKPSGNPS--YTQVFGQWLCDIAAEDARVVGITPAMCEGSG 344

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           +  F EK+P+RYFDVG+AEQHA+TF+AGLAC G KP   I S FLQRAYDQ+++D+  Q+
Sbjct: 345 MGEFAEKYPQRYFDVGIAEQHALTFAAGLACDGYKPVVAIYSTFLQRAYDQLIHDIAIQK 404

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPV   I   GLVG+DG T  G+FD++F+ C+PNM VMAPSDE+E   M+ T  ++D  P
Sbjct: 405 LPVILAIDRGGLVGADGATHAGSFDLSFLRCIPNMTVMAPSDENECRQMLYTAMTLDT-P 463

Query: 554 VCFRYPRGAIVRTDLPG------YRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARA 607
              RYPRG       PG       + +P  +GK +V  EG  VA+L +G+M+     A A
Sbjct: 464 TAVRYPRGVG-----PGVAVCNEMQALP--VGKAEVRREGVRVAILAFGSML-----APA 511

Query: 608 LLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGL 666
           L++   +D TV + RF KPLD +L+  +   H  ++TVEE ++ GG GS V+  +A  G+
Sbjct: 512 LIAGEQLDATVVNMRFVKPLDAELLHRMASAHELVVTVEENTVQGGAGSAVAECLAEAGI 571

Query: 667 LDSGVKWRPIVLPDNYIEHASPTQQLALAGL 697
               V    + LPD +I+   P + LA  GL
Sbjct: 572 ---AVNLLHLGLPDRFIDQGDPVKMLADCGL 599


>gi|237755740|ref|ZP_04584346.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sulfurihydrogenibium
           yellowstonense SS-5]
 gi|237692104|gb|EEP61106.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sulfurihydrogenibium
           yellowstonense SS-5]
          Length = 631

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 246/618 (39%), Positives = 360/618 (58%), Gaps = 34/618 (5%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+L+ + N   LK+L  +E+++L  +IRS +  + S     +  SL  VELTVAL   F 
Sbjct: 5   PMLEKINNYKDLKNLNKEEIEKLCEDIRSYIIDVTSLNGGHIGPSLGTVELTVALLMAFD 64

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
              DKI+WDVG QTYA+KILT R+    TLR+  GISG++   ES+YD F  GH   S+S
Sbjct: 65  PEKDKIVWDVGHQTYAYKILTDRKEQFRTLRQYKGISGFSKIKESKYDHFGTGHSSTSIS 124

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLD-SNMIVILNDSRHSLHP 258
           A LG  V +D+K      + VI +G   AGQA+E ++NAG+LD S  IVILND++ S+ P
Sbjct: 125 AALGFRVGKDLKKDDAYTIAVIGDGAMTAGQAFEGLNNAGWLDPSRFIVILNDNQMSISP 184

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAK-GMTKRIGRGMHEWAAKVDEYARGMI 317
                   ++ A+ +  ++I + + F++ R+  K  + K  G    +   K++EY +G+ 
Sbjct: 185 --------NVGAIYTYFNKIITKQVFQKPRQKLKEAINKIFGEQGVKIFRKIEEYTKGLF 236

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQK 377
            P    +FEELG  Y+GP+DGH++ DL   L+ +  +   GP+L+HV+T++ +  +  ++
Sbjct: 237 AP--GLIFEELGFTYVGPIDGHSLFDLEQTLENIKQM--RGPILLHVITQKGKGYKYAEE 292

Query: 378 SEA-------IEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
           +          +K     + S++LP      TY   F +ALV  AEKD  +V +   M  
Sbjct: 293 NPTTFHGVSPFDKISGVFNKSSNLP------TYSKVFGDALVEIAEKDDKVVAITPAMRE 346

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L  F EKFP+R+FDVG+AEQHA TF+  LA  G KP     S FLQRAYDQV++D+ 
Sbjct: 347 GSGLVKFAEKFPDRFFDVGIAEQHAATFAGALALEGFKPVAAYYSTFLQRAYDQVIHDIA 406

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q LPV F I   GLVG DGPT  G FDI F+  +PNMI+ +P DE EL D++ T  +  
Sbjct: 407 LQELPVFFAIDRGGLVGDDGPTHHGVFDIAFLRPIPNMIIASPKDEQELRDLLYTGLN-S 465

Query: 551 DRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLS 610
            RP   RYPRG      + G+    IEIG  ++L EG+D+A+L  G  V   L+ +  L 
Sbjct: 466 KRPFALRYPRGTGYGVKMEGFN--TIEIGSWEILDEGRDIAILAVGKYVYRALEVKKQLR 523

Query: 611 KLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDS 669
             G + TV +ARF KP+D  L+ +L + H F+IT E+G + GGFGS V+ F+  +G  + 
Sbjct: 524 LKGFNPTVVNARFIKPMDENLLNKLLKTHEFVITAEDGVLNGGFGSAVAEFVIDNGYSNK 583

Query: 670 GVKWRPIVLPDNYIEHAS 687
            +++    +PD +IEH  
Sbjct: 584 VLRFG---IPDKFIEHGK 598


>gi|334119058|ref|ZP_08493145.1| 1-deoxy-D-xylulose-5-phosphate synthase [Microcoleus vaginatus
           FGP-2]
 gi|333458529|gb|EGK87146.1| 1-deoxy-D-xylulose-5-phosphate synthase [Microcoleus vaginatus
           FGP-2]
          Length = 635

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 257/647 (39%), Positives = 379/647 (58%), Gaps = 33/647 (5%)

Query: 82  LDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAP 141
           L  + +P +L  L+I +L+Q+A +IR +    V+ +   L   L  VELT+AL+      
Sbjct: 3   LSELTHPNQLHGLSIHQLEQIARQIREKHLETVAASGGHLGPGLGVVELTLALYQTLDLD 62

Query: 142 VDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAG 201
            DK+ WDVG Q Y HK++TGR +  HTLR+KDG++GY  R ES++D F AGH   S+SA 
Sbjct: 63  RDKVTWDVGHQAYPHKLITGRYNQFHTLRQKDGVAGYLKRCESKFDHFGAGHASTSISAA 122

Query: 202 LGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPKI 260
           LGMA+ARD+KG+    V VI +G    G A EA+++AG++  +N++V+LND+  S+ P  
Sbjct: 123 LGMAMARDLKGENFKTVAVIGDGALTGGMALEAINHAGHMPKTNLLVVLNDNEMSISP-- 180

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGM---- 316
                 ++ A++  L++++ S   + L++  +   K I      +  +++    GM    
Sbjct: 181 ------NVGAITRYLNKMRLSPPVQFLKDNLEEQFKHIPFVGETFTPEMERLKEGMKRLA 234

Query: 317 IGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQ 376
           +   G+ + EELG  Y+GPVDGHN+E+LI+  ++  ++   GPVLVHVVT + +     +
Sbjct: 235 VSKVGAVI-EELGFTYMGPVDGHNLEELIATFKQAHTI--QGPVLVHVVTVKGKGYAIAE 291

Query: 377 KSEAIEKQQE--GASDSNSLPFGN-YSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
           K +     Q     +    LP        Y   F  ALV  AE +  IV + A M     
Sbjct: 292 KDQVGYHAQNPFNLATGKGLPSTKPKPPAYSKVFAHALVKLAEDNPKIVGITAAMATGTG 351

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L    EK P++Y DVG+AEQHAVT SAGLAC G++P   I S F+QR YDQ+++DV  Q 
Sbjct: 352 LDKLHEKLPKQYIDVGIAEQHAVTLSAGLACEGMRPVVAIYSTFVQRGYDQIIHDVCIQN 411

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPV F +  AG+VG+DGPT  G +DI+F+ CLPNM +MAP DE EL  M+ T  +    P
Sbjct: 412 LPVFFCLDRAGIVGADGPTHQGMYDISFLRCLPNMTIMAPKDEAELQRMIVTGINHTSGP 471

Query: 554 VCFRYPRGAIVRTDL--PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSK 611
           +  RYPRG      L   G+  +P  IGKG++L  G D+ +LGYG+MV   ++   +LS+
Sbjct: 472 ITMRYPRGNGYGVPLMEEGWEELP--IGKGEILRNGDDLLILGYGSMVYPAMQTAEILSE 529

Query: 612 LGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSG 670
            GI+ TV +ARF KPLD +L+  L Q    ++T+EEGS+ GGFGS V+     + LLD+ 
Sbjct: 530 HGIEATVINARFVKPLDTELILPLAQRIGRVVTLEEGSLMGGFGSAVA-----ESLLDNN 584

Query: 671 VKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTR 714
           V   P++   +PD  ++HA+P Q  A  GLT   +A   L+   R +
Sbjct: 585 V-LVPLMRLGVPDTLVDHATPEQSFASLGLTPPQMADRILATFSRKQ 630


>gi|327399141|ref|YP_004340010.1| 1-deoxy-D-xylulose-5-phosphate synthase [Hippea maritima DSM 10411]
 gi|327181770|gb|AEA33951.1| 1-deoxy-D-xylulose-5-phosphate synthase [Hippea maritima DSM 10411]
          Length = 622

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 256/648 (39%), Positives = 371/648 (57%), Gaps = 48/648 (7%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L+ V  P  LK L++KEL+ LA E+R  +   VSKT   L SSL AVELT+ALH+VF  
Sbjct: 2   LLEKVNYPSDLKKLSVKELEILADEVREYIIRNVSKTGGHLASSLGAVELTIALHYVFET 61

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P DK++WDVG QTYAHKI+TGR+    TLR+  G+SG+  R ES YD FN GH   S+SA
Sbjct: 62  PEDKLVWDVGHQTYAHKIITGRKDRFPTLRQYGGLSGFPKREESPYDTFNVGHAGTSISA 121

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKI 260
            LGMA+ RD+    + +V +I +G+   G AYE + NAGY+D++++V++ND+  S+ P  
Sbjct: 122 ALGMALGRDLTNSSDHVVAIIGDGSLSCGIAYEGLDNAGYIDTDLVVVVNDNNMSISP-- 179

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLRE----------VAKGMTKRIGRGMHEWAAKVD 310
                 S+ +LS+ LS+  S   + +LR+          + K  T +I R + E      
Sbjct: 180 ------SLGSLSAYLSKKMSGPIYNRLRDEVEKVIESLPLPKEPTLKIARKLEE---SFK 230

Query: 311 EYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR 370
            ++ G+       LFEELG  Y GP++GH +EDLI + + V  L   GP+L+HVVT++ +
Sbjct: 231 FFSPGL-------LFEELGFKYFGPLNGHKLEDLIKIFENVKKL--RGPILIHVVTKKGK 281

Query: 371 RAEDTQKSEAIEKQ------QEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVV 424
             +  + + ++         + G    +     N S  + D  +E +     K  D+V +
Sbjct: 282 GYKPAEDNPSLFHGIGKFDVESGEPIKSKTVKKNCSSVFGDKVVEIM----RKRDDVVAI 337

Query: 425 HAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQ 484
            A M +   LQ  + +FP+R +DVG+AEQHAVT + GL+  G+KP   I S FLQRAYDQ
Sbjct: 338 TAAMLLGTGLQKAKNEFPDRVYDVGIAEQHAVTMAGGLSIKGIKPIVAIYSTFLQRAYDQ 397

Query: 485 VVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVA 544
           +++D+  Q LPV F I  AG+VG DG T  G FDI+++  +PNM ++AP D  EL  ++ 
Sbjct: 398 IIHDIALQNLPVIFAIDRAGIVGDDGETHQGVFDISYLRAVPNMTIIAPKDSYELEKVLE 457

Query: 545 TVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVL--VEGKDVALLGYGAMVQNC 602
                +D PV  RYPRG     D   YR   IEIGK + L   E  DVA+L  G   +  
Sbjct: 458 FAVDYNDGPVAVRYPRGTCATID-ERYRIEKIEIGKWQTLKKAENDDVAILAVGNCNEVA 516

Query: 603 LKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEG-SIGGFGSHVSHFI 661
           LK    L+K  + VT+ +A F KP+D +L+R L + +  ++T+EE   +GGFG  V+ F 
Sbjct: 517 LKVEEELAKSNVGVTIVNALFVKPMDYELLRNLSK-YKVVVTIEENVKLGGFGEAVASFF 575

Query: 662 ALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSL 709
             +G+   GVK+R   LPD +IEH S        GL+   I+   L L
Sbjct: 576 MEEGI---GVKFRSFALPDIFIEHGSQEILRDKYGLSARKISEYILHL 620


>gi|253990913|ref|YP_003042269.1| 1-deoxy-D-xylulose-5-phosphate synthase [Photorhabdus asymbiotica]
 gi|253782363|emb|CAQ85527.1| 1-deoxy-D-xylulose-5-phosphate synthase [Photorhabdus asymbiotica]
          Length = 621

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 258/626 (41%), Positives = 370/626 (59%), Gaps = 36/626 (5%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P L L ENP  L+ L  + L +L  E+R  L + VS++     S L  VELTVALH+V+ 
Sbjct: 9   PTLALAENPEELRMLPKESLPKLCDELRQFLLNSVSRSSGHFASGLGTVELTVALHYVYK 68

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P DK++WDVG Q Y HKILTGRR  I T+R+K+G+  +  R ESEYD    GH   S+S
Sbjct: 69  TPFDKLVWDVGHQAYPHKILTGRRDRIDTIRQKNGLHPFPWRDESEYDTLCVGHSSTSIS 128

Query: 200 AGLGMAVA--RDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLH 257
           AGLGMA+A  R+ KG+R   V VI +G   AG A+EAM++AG +D +++VILND+  S+ 
Sbjct: 129 AGLGMAIAAQRENKGRR--TVCVIGDGAITAGMAFEAMNHAGDIDPDILVILNDNEMSI- 185

Query: 258 PKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMI 317
                    ++ AL++ L+++ S K +  LRE  K +   +   + E   K +E+ +GM+
Sbjct: 186 -------SENVGALNNHLAQLLSGKLYTTLREGGKKVFSNLPP-IKELLKKTEEHIKGMV 237

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQK 377
            P   TLFEELG  YIGP+DGH++  L   L+ +  L   GP L+H++T++ R     +K
Sbjct: 238 IP--GTLFEELGFNYIGPIDGHDVLTLTQTLKNMREL--KGPQLLHIMTKKGRGYAPAEK 293

Query: 378 S----EAIEKQQEGASDSNSLPFGNYSR-TYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
                 A+ K       + +LP  + +R T+   F E L  EA  DK ++ +   M    
Sbjct: 294 DPISWHAVPKFDPA---TGTLPKSSDNRPTFSKIFGEWLCEEAANDKKLMAITPAMREGS 350

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            +  F  ++P++YFDV +AEQHAVTF+AGLA GG KP   I S FLQRAYDQV++DV  Q
Sbjct: 351 GMVRFSREYPDQYFDVAIAEQHAVTFAAGLAIGGYKPIVAIYSTFLQRAYDQVIHDVAIQ 410

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
            LPV F I   G+VG+DG T  GAFD++F+ C+PNM++MAPSDE+E   M+ T       
Sbjct: 411 NLPVLFAIDRGGIVGADGQTHQGAFDLSFLRCIPNMVIMAPSDENECRQMLHTGYHYQQG 470

Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
           PV  RYPRGA    +L  +  +P  IGKG +  +GK VA+L +G ++ + + A   L   
Sbjct: 471 PVAVRYPRGAGTGAELQPFEQLP--IGKGVIRRQGKKVAILNFGTLLPDAITAAESL--- 525

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGV 671
             + TV D RF KPLD +L+ E+  +H  L+T+EE +I GG GS V+  +  +G     +
Sbjct: 526 --NATVIDMRFVKPLDKELILEMAGSHDLLVTLEENAIMGGAGSGVNELLMQEG---HHI 580

Query: 672 KWRPIVLPDNYIEHASPTQQLALAGL 697
           +   + LPD ++   S  +  A  GL
Sbjct: 581 QILNLGLPDQFVPQGSQEEIRADLGL 606


>gi|303250727|ref|ZP_07336923.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|307251739|ref|ZP_07533643.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|302650397|gb|EFL80557.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|306860825|gb|EFM92834.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
          Length = 617

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 254/624 (40%), Positives = 375/624 (60%), Gaps = 33/624 (5%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+L  + +P  L+ L  ++L+ +A E+R+ L   VS+T   L S L  VELTVALH+V+ 
Sbjct: 6   PLLSQINSPEDLRLLAKEQLQSVADELRAYLLESVSQTSGHLASGLGVVELTVALHYVYQ 65

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG Q Y HKILTGRR  +HT+R+K+GI  +  R ES YD  + GH   S+S
Sbjct: 66  TPFDQLIWDVGHQAYPHKILTGRRDQMHTIRQKNGIHPFPWREESLYDVLSVGHSSTSIS 125

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           AG+G+AVA + +      V VI +G   AG A+EAM++AG L ++M+VILND+  S+   
Sbjct: 126 AGVGIAVAAEKENAGRKTVCVIGDGAITAGMAFEAMNHAGALHTDMLVILNDNEMSI--- 182

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                  ++ AL++ L+RI S   +  +R+ +K +  ++   +  +  K +E+ +G+I P
Sbjct: 183 -----SENVGALNNHLARIFSGSIYTTVRDGSKKVLDKVPT-IKNFMKKSEEHMKGVISP 236

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
           + STLFEELG  YIGP+DGHNI++L+  L  +  L   GP  +H+ T++ +  E  + ++
Sbjct: 237 E-STLFEELGFNYIGPIDGHNIDELVKTLSNMREL--KGPQFLHIRTKKGKGYEPAE-ND 292

Query: 380 AIEKQQEGASDSN--SLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLF 437
            I        D     LP      TY D F   L   AE+D  ++ +   M     +  F
Sbjct: 293 PIGYHGVPKFDPTCGQLPKSKTIPTYSDIFGNWLCEMAEQDSKLIGITPAMREGSGMVEF 352

Query: 438 QEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVR 497
            ++FPE+YFDV +AEQHAVTF AGLA  G KP   I S+FLQRAYDQ+++DV  Q LPV 
Sbjct: 353 SKRFPEQYFDVAIAEQHAVTFGAGLAIAGYKPVVAIYSSFLQRAYDQLIHDVAIQNLPVI 412

Query: 498 FVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFR 557
           F I  AG+VG+DG T  GAFD++FM C+PNM +M PSDE+E+  M+ T   + + P   R
Sbjct: 413 FAIDRAGIVGADGQTHQGAFDVSFMRCIPNMTIMCPSDENEMRQMLYTAYRM-NTPTAVR 471

Query: 558 YPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVT 617
           YPRG      L   +   +E+GKGK++ +G+ VA+L +G ++    +AR +  K   + T
Sbjct: 472 YPRGNAQGVVLAPMQA--LEVGKGKLIQQGQKVAILNFGPLLN---EARIVAEKH--NYT 524

Query: 618 VADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVKWRPI 676
           +AD RF KPLD +LV EL  +H  L+T+EE +I GG GS V+ ++   G      K RP+
Sbjct: 525 LADMRFVKPLDEQLVAELADSHELLVTLEENAIQGGAGSAVNEYLQKIG------KIRPL 578

Query: 677 VL---PDNYIEHASPTQQLALAGL 697
           V+   PD ++  A+  +  A  GL
Sbjct: 579 VMLGIPDFFVPQATQAESYADLGL 602


>gi|189485329|ref|YP_001956270.1| 1-deoxy-D-xylulose-5-phosphate synthase [uncultured Termite group 1
           bacterium phylotype Rs-D17]
 gi|170287288|dbj|BAG13809.1| 1-deoxy-D-xylulose-5-phosphate synthase [uncultured Termite group 1
           bacterium phylotype Rs-D17]
          Length = 614

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 259/635 (40%), Positives = 366/635 (57%), Gaps = 28/635 (4%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +LD + NP  LK L  + L  LA EIR E+ + VSK    L SSL  V+L++A+H+VF +
Sbjct: 3   VLDSINNPQDLKKLKKENLIDLAKEIREEIINTVSKNGGHLASSLGVVDLSIAIHYVFDS 62

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P DKI+WDVG Q+YAHKILTGR+S   T+R   G+SG+  RSESEYD F+ GH   S+SA
Sbjct: 63  PHDKIIWDVGHQSYAHKILTGRKSKFKTIRTHSGLSGFPKRSESEYDAFSVGHSSTSISA 122

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKI 260
            LG A ARD+K +   IV VI +G+   G A+E + NAG+L  NM+VILND+   +  K 
Sbjct: 123 ALGFAAARDLKNEDYKIVAVIGDGSMTCGLAFEGLQNAGHLKKNMLVILNDNEMFISQK- 181

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQ 320
                  + A++  L+++ ++   R+  E       R   G      K  +  + M+ P 
Sbjct: 182 -------VGAVAGYLAKLLTAGMARKFEEKVMKTVSRF-HGFGSPVGKFIKRVKVMLFP- 232

Query: 321 GSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSEA 380
               FEE+G  YIGPV GHNI +LI +L+ +  + +  PVL+HV+T++ +     ++ + 
Sbjct: 233 -GMFFEEMGFTYIGPVQGHNINNLIVILENLKDVKT--PVLLHVITKKGKGYAPAEE-DP 288

Query: 381 IEKQQEGASDSNSLPFGNYSR----TYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQL 436
           ++    G  D  S   G  ++    TY   F + L+  A+ D  IV V A M     L  
Sbjct: 289 VKFHSVGKFDIKS---GRIAKGEAITYTKVFSDTLIELAQSDDKIVAVTAAMPEGTGLDK 345

Query: 437 FQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPV 496
           F EKFP+RYFDVG+AE HAVTF+A +A GG+ P C I S F+QRA D +++DV  Q LPV
Sbjct: 346 FSEKFPDRYFDVGIAEGHAVTFAAAMAAGGMHPVCAIYSTFMQRAIDNIIHDVALQNLPV 405

Query: 497 RFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCF 556
            F +  AGLVG DG T  GAFD+++++ +PN++VM+PSDE+EL +M+ T  +  + P   
Sbjct: 406 VFAVDRAGLVGEDGGTHHGAFDLSYLNYIPNLVVMSPSDENELRNMLKTALN-SNTPCVI 464

Query: 557 RYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDV 616
           RYP+G  +   L       ++IGK  VL +G+D+  L  G  V+ CLKA  LL +  ++ 
Sbjct: 465 RYPKGTGIGAALYKLPCCILQIGKATVLRQGRDICFLAVGNHVETCLKASDLLLERNVNA 524

Query: 617 TVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVKWRP 675
           +V + RF KPLDI  ++E+       ITVEE ++ GGFG  V  F     L  SG     
Sbjct: 525 SVVNMRFLKPLDINTLKEMLLKTRKFITVEENALTGGFGETVKAF-----LCSSGAVVEC 579

Query: 676 IVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
           I LPD +IEH S        G T   I   AL +L
Sbjct: 580 IGLPDKFIEHGSLRFLREKYGFTPESIVEKALQML 614


>gi|326390208|ref|ZP_08211769.1| deoxyxylulose-5-phosphate synthase [Thermoanaerobacter ethanolicus
           JW 200]
 gi|325993856|gb|EGD52287.1| deoxyxylulose-5-phosphate synthase [Thermoanaerobacter ethanolicus
           JW 200]
          Length = 620

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 248/643 (38%), Positives = 377/643 (58%), Gaps = 32/643 (4%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L+ + +P  LK +  K+   L  EIR  L   VSKT   L S+L  VELTVALH+VF++
Sbjct: 1   MLEQINSPYDLKKIDKKDFPLLCEEIRQFLIEKVSKTGGHLASNLGIVELTVALHYVFNS 60

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           PVDKI+WDVG Q Y HKI+TGR+    TLRK +G+SGYT R+ES +D F AGH   S+SA
Sbjct: 61  PVDKIIWDVGHQCYVHKIITGRKDQFDTLRKFNGLSGYTKRTESVHDIFGAGHSSTSISA 120

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKI 260
            LG+A ARD+KG++  +V VI +G    G A+EA++NAG   +++IV+LN +  S+    
Sbjct: 121 ALGIAKARDLKGEKYSVVAVIGDGALTGGMAFEALNNAGRSKTDLIVVLNHNEMSI---- 176

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTK---RIGRGMHEWAAKVDEYARGMI 317
                 ++ +LS  LS++++  ++ +L++    +      IG+ +H++  ++ +  + ++
Sbjct: 177 ----SENVGSLSLYLSKLRTDPTYNKLKQEVDNLLNIVPPIGKSLHKYIERIKDSVKQLV 232

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQK 377
            P     FEE+G  Y+GP+DGH+++ LI VL+    +   GP+LVHV+T++ +  +  +K
Sbjct: 233 VP--GMFFEEMGFTYLGPIDGHDVDSLIEVLERAKKI--KGPILVHVITKKGKGYKFAEK 288

Query: 378 SEAIEKQQEGAS-DSNSLPFGNYSR-TYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQ 435
               +K    A  D  +  F N  + TY D F + L   A KD  I+ + A M     L 
Sbjct: 289 FP--DKFHSAAPFDIQTGKFVNEGQATYSDVFGKTLTEMALKDDKIIAITAAMPEGTGLI 346

Query: 436 LFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLP 495
            F +  PER+FDVG+AEQHA TF+AG+A  G KP+  + S FLQRAYDQ+++DV  Q+LP
Sbjct: 347 HFAKLIPERFFDVGIAEQHATTFAAGMAVQGYKPYFAVYSTFLQRAYDQLIHDVCIQKLP 406

Query: 496 VRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVC 555
           V F I  AG+VG DG T  G FD++++  +PN+ +M+P D +ELV+MV    ++ D PV 
Sbjct: 407 VVFAIDRAGIVGEDGETHQGVFDLSYLRPIPNIAIMSPKDANELVEMVKLSRNL-DFPVA 465

Query: 556 FRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGID 615
            RYPRG     D+   R   IE GK +++ EG ++A+   G MV   L+A+ +L    + 
Sbjct: 466 IRYPRGKAGEFDIT--RECSIEFGKAELISEGTEIAIFALGRMVGKVLEAKEILKASDLQ 523

Query: 616 VTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVKWR 674
             + + RF KP+D +L+ ++     F++TVE+  I GG GS      A+  LL+S   ++
Sbjct: 524 PFIVNLRFVKPVDEELIFDISNKVKFIVTVEDNVIAGGVGS------AILELLNSNGIYK 577

Query: 675 PIV---LPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTR 714
           P++    PD +IEH           L    IA T L      R
Sbjct: 578 PVLRLGFPDKFIEHGDVENLFKKYNLDAESIANTILQKYKEMR 620


>gi|420247660|ref|ZP_14751055.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia sp. BT03]
 gi|398070554|gb|EJL61848.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia sp. BT03]
          Length = 632

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 268/644 (41%), Positives = 377/644 (58%), Gaps = 52/644 (8%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L  +++P  L+ L  ++L+ LA E+R+ +   VS+T   L S+L  VELT+ALH+VF  
Sbjct: 4   LLKTIDDPADLRRLDRRQLQPLADELRAFVLDSVSQTGGHLSSNLGTVELTIALHYVFDT 63

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+I+WDVG QTY HKILTGRR  +H+LR+  GISG+  R ES YD F   H   S+SA
Sbjct: 64  PRDRIVWDVGHQTYPHKILTGRRDQMHSLRQLGGISGFPKRDESPYDTFGTAHSSTSISA 123

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDS-NMIVILNDSRHSLHPK 259
            LGMA+   ++G+    + VI +G   AG A+EAM+NAG  D   ++VILND+  S+ P 
Sbjct: 124 ALGMAIGSKLRGEDAYSIAVIGDGAMTAGMAFEAMNNAGVEDDVPLLVILNDNDMSISP- 182

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGR---GMHEWAAKVDEYARGM 316
                   + AL+  L+R+ S + +      A+   +R+ R    + + A K++E+A+GM
Sbjct: 183 -------PVGALNRHLARLMSGRFY----AAARAGVERVLRHAPPVLDLARKLEEHAKGM 231

Query: 317 IGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQ 376
           I P  +TLFEE G  YIGP+DGH+++ LI  LQ +  L   GP  +HVVT   ++ +  +
Sbjct: 232 IVP--ATLFEEFGFNYIGPIDGHDLDSLIPTLQNIKEL--RGPQFLHVVT---KKGQGYK 284

Query: 377 KSEAIEKQQEGASDSNSLPFGNYS-----RTYDDCFIEALVMEAEKDKDIVVVHAGMEMD 431
            +EA      G    N       S     +TY   F E L   AE D  +V +   M   
Sbjct: 285 LAEADPVLYHGPGKFNPAEGIKPSTTPAKKTYTQVFGEWLCDAAELDSRVVGITPAMREG 344

Query: 432 LSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQ 491
             +  F+++FP+RY+DVG+AEQHAVTF+ GLA  GLKP   I S FLQR YDQ+++DV  
Sbjct: 345 SGMVEFEKRFPDRYYDVGIAEQHAVTFAGGLATEGLKPVVAIYSTFLQRGYDQLIHDVAL 404

Query: 492 QRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDD 551
           Q LPV F I  AGLVG+DG T  GA+D+ F+ C+PNM VMA SDE+E   M+ T A    
Sbjct: 405 QNLPVVFAIDRAGLVGADGATHAGAYDLAFLRCIPNMTVMAASDENECRQMLYT-ALQQP 463

Query: 552 RPVCFRYPRGAIVRTDLPGYRGI-PIEIGKGKVLVE-----GKDVALLGYGAMVQNCLKA 605
            P   RYPRGA   T +   + +  + +GKG+V  +     GK +A+L +G MV   L A
Sbjct: 464 NPTAVRYPRGA--GTGVATVKQMAALPLGKGEVRRQSTQPAGKRIAILAFGTMVAPSLAA 521

Query: 606 RALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALD 664
              L     D TVA+ RF KP+D  LVREL + H  ++TVEEG + GG GS       ++
Sbjct: 522 AEQL-----DATVANMRFVKPIDADLVRELAETHDAIVTVEEGCVMGGAGS-----ACVE 571

Query: 665 GLLDSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAAT 705
            +++SGV  RP++   LPD +I+H  P + LA  GL    IA +
Sbjct: 572 AMMESGV-IRPVLQLGLPDRFIDHGDPAKLLASCGLDAAGIAKS 614


>gi|425445335|ref|ZP_18825367.1| 1-deoxy-D-xylulose-5-phosphate synthase [Microcystis aeruginosa PCC
           9443]
 gi|389734697|emb|CCI01684.1| 1-deoxy-D-xylulose-5-phosphate synthase [Microcystis aeruginosa PCC
           9443]
          Length = 636

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 251/639 (39%), Positives = 369/639 (57%), Gaps = 29/639 (4%)

Query: 82  LDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAP 141
           L  + +P +L  L++++L+ +A +IR +    ++ T   L   L  VELT+AL+      
Sbjct: 3   LSEITHPNQLHGLSLRQLEDIARQIREKHLQTIAATGGHLGPGLGVVELTIALYQTLDLD 62

Query: 142 VDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAG 201
            DK+LWDVG Q Y HK+LTGR +  HTLR+K+G++GY  R ES++D F AGH   S+SAG
Sbjct: 63  RDKVLWDVGHQAYPHKLLTGRYNDFHTLRQKNGVAGYLKRCESKFDHFGAGHASTSISAG 122

Query: 202 LGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPKI 260
           LGMA+ARD KG+   +V++I +G    G A EA+++AG+L ++N++VILND+  S+ P  
Sbjct: 123 LGMALARDAKGEDFKVVSIIGDGALTGGMALEAINHAGHLPNTNIMVILNDNEMSISP-- 180

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRI---GRGMHEWAAKVDEYARGMI 317
                 ++ A+S  L++++ S+  + + +  +   K +   G  +     +V E  + + 
Sbjct: 181 ------NVGAISRYLNKVRLSEPVQFIADNLEEQLKHLPFFGDSLTPEMERVKEGMKRLA 234

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQK 377
            P+   + EELG  Y GP+DGHNI +LI+  ++   +   GPV VHV T + +  E  +K
Sbjct: 235 VPKVGAVIEELGFKYFGPIDGHNIPELIATFKQAHKV--HGPVFVHVATVKGKGYEWAEK 292

Query: 378 SEAIEKQQEG---ASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
            +     Q     A+             Y   F   L   AE D  I+ + A M     L
Sbjct: 293 DQVGYHAQNPFNLATGKPIPSSKPKPPAYSKVFGHTLTKLAENDPRIIGITAAMATGTGL 352

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             FQ K P++Y DVG+AEQHAVT + GLAC G++P   I S FLQRA+DQ+++D+  Q L
Sbjct: 353 DKFQAKLPKQYIDVGIAEQHAVTLAGGLACEGMRPVVTIYSTFLQRAFDQIIHDICIQNL 412

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PV F +  AG+VG+DGPT  G +DI ++ C+PNM +MAP DE EL  MV T  +    P+
Sbjct: 413 PVFFCMDRAGIVGADGPTHQGMYDIAYLRCIPNMTIMAPKDEAELQRMVVTGINHTSGPI 472

Query: 555 CFRYPRGAIVRTDL--PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
             RYPRG  +   L   G+  +P  IGKG++L  G DV LLGYG MV   L+   +LS+ 
Sbjct: 473 AMRYPRGNGLGVPLMEEGWEALP--IGKGEILRSGDDVLLLGYGTMVNTSLQVAEILSEH 530

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSG- 670
           GI+ TV +ARF KPLD +L+  L Q    ++T+EEG + GGFGS V     L+ L D+  
Sbjct: 531 GIEATVVNARFVKPLDTELIFPLAQRLGKVVTLEEGCLMGGFGSAV-----LEALQDANI 585

Query: 671 -VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALS 708
            V  +   +PD  ++HA P +  A  GLT   IA   L+
Sbjct: 586 LVPVKRFGVPDKLVDHAKPEESFADLGLTSPQIAQQVLA 624


>gi|307256234|ref|ZP_07538021.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|306865415|gb|EFM97311.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
          Length = 617

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 254/624 (40%), Positives = 374/624 (59%), Gaps = 33/624 (5%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+L  + +P  L+ L  ++L+ +A E+R+ L   VS+T   L S L  VELTVALH+V+ 
Sbjct: 6   PLLSQINSPEDLRLLAKEQLQSVADELRAYLLESVSQTSGHLASGLGVVELTVALHYVYQ 65

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG Q Y HKILTGRR  +HT+R+K+GI  +  R ES YD  + GH   S+S
Sbjct: 66  TPFDQLIWDVGHQAYPHKILTGRRDQMHTIRQKNGIHPFPWREESLYDVLSVGHSSTSIS 125

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           AG+G+AVA + +      V VI +G   AG A+EAM++AG L ++M+VILND+  S+   
Sbjct: 126 AGVGIAVAAEKENAGRKTVCVIGDGAITAGMAFEAMNHAGALHTDMLVILNDNEMSI--- 182

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                  ++ AL++ L+RI S   +  +R+ +K +  ++   +  +  K +E+ +G+I P
Sbjct: 183 -----SENVGALNNHLARIFSGSIYTTVRDGSKKVLDKVPT-IKNFMKKSEEHMKGVISP 236

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
           + STLFEELG  YIGP+DGHNI++L+  L  +  L   GP  +H+ T++ +  E  + ++
Sbjct: 237 E-STLFEELGFNYIGPIDGHNIDELVKTLSNMREL--KGPQFLHIRTKKGKGYEPAE-ND 292

Query: 380 AIEKQQEGASDSN--SLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLF 437
            I        D     LP      TY D F   L   AE+D  ++ +   M     +  F
Sbjct: 293 PIGYHGVPKFDPTCGQLPKSKTIPTYSDIFGNWLCEMAEQDSKLIGITPAMREGSGMVEF 352

Query: 438 QEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVR 497
            ++FPE+YFDV +AEQHAVTF AGLA  G KP   I S+FLQRAYDQ+++DV  Q LPV 
Sbjct: 353 SKRFPEQYFDVAIAEQHAVTFGAGLAIAGYKPVVAIYSSFLQRAYDQLIHDVAIQNLPVI 412

Query: 498 FVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFR 557
           F I  AG+VG+DG T  GAFD++FM C+PNM +M PSDE+E+  M+ T   + + P   R
Sbjct: 413 FAIDRAGIVGADGQTHQGAFDVSFMRCIPNMTIMCPSDENEMRQMLYTAYRM-NTPTAVR 471

Query: 558 YPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVT 617
           YPRG      L   +   +E+GKGK++ +GK VA+L +G ++    +AR +  K   + T
Sbjct: 472 YPRGNAQGVALAPMQA--LEVGKGKLIQQGKKVAILNFGPLLN---EARIVAEKY--NYT 524

Query: 618 VADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVKWRPI 676
           +AD RF KPLD +LV EL  +H  L+ +EE +I GG GS V+ ++   G      K RP+
Sbjct: 525 LADMRFVKPLDEQLVAELADSHELLVALEENAIQGGAGSAVNEYLQKIG------KIRPL 578

Query: 677 VL---PDNYIEHASPTQQLALAGL 697
           V+   PD ++  A+  +  A  GL
Sbjct: 579 VMLGIPDFFVPQATQAEIYADLGL 602


>gi|427740162|ref|YP_007059706.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rivularia sp. PCC 7116]
 gi|427375203|gb|AFY59159.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rivularia sp. PCC 7116]
          Length = 636

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 247/641 (38%), Positives = 376/641 (58%), Gaps = 32/641 (4%)

Query: 82  LDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAP 141
           L  + +P +L  L+I++L+Q+  +IR +    V+ T   L   L  VELT+ L+      
Sbjct: 3   LSEITHPNQLHGLSIRQLEQIGRQIRDKHLQTVAATGGHLGPGLGVVELTLGLYQTLDLD 62

Query: 142 VDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAG 201
            DK++WDVG Q Y HK++TGR +  HTLR+KDG++GY  R E+++D F AGH   S+SAG
Sbjct: 63  RDKVIWDVGHQAYPHKLITGRYNHFHTLRQKDGVAGYLKRCENKFDHFGAGHASTSISAG 122

Query: 202 LGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPKI 260
           LGMA+ARD KG+   +  +I +G    G A EA+++AG+L ++N++V+LND+  S+ P  
Sbjct: 123 LGMAIARDRKGENFKVAAIIGDGALTGGMALEAINHAGHLPNTNLLVVLNDNEMSISP-- 180

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRI----GRGMHEWAAKVDEYARGM 316
                 ++ A+   L++++ S   + +++  +   K++    G  +     ++ E  + +
Sbjct: 181 ------NVGAIPRYLNKMRLSPPMQFIKDNFEEQVKQLPFVGGDSIPPELERIKEGMKRL 234

Query: 317 IGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQ 376
             P+   +FEELG  Y+GP+DGHN+EDLI+  ++   +   GPVLVHV T + +  +  +
Sbjct: 235 AVPKVGAVFEELGFTYMGPIDGHNLEDLIATFKQAHKI--PGPVLVHVATTKGKGYDIAE 292

Query: 377 KSEAIEKQQE------GASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
           K +     Q       G +  +S P       Y   F   LV  AE++  I+ + A M  
Sbjct: 293 KDKVGYHAQSPFNLTTGKAIPSSKP---KPPKYSKVFAHTLVKLAEQNPKIIGITAAMAT 349

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L   Q K P++Y DVG+AEQHAVT +AGLA  G++P   I S FLQR YDQ+V+DV 
Sbjct: 350 GTCLDKLQAKLPDQYIDVGIAEQHAVTLAAGLATQGMRPVADIYSTFLQRGYDQIVHDVC 409

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q LPV F +  AG+VG+DGPT  G +DI +M C+PN+++MAP DE EL  M  T  +  
Sbjct: 410 IQNLPVFFCLDRAGIVGNDGPTHQGMYDIAYMRCIPNIVMMAPKDEAELQRMTVTGVNYT 469

Query: 551 DRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLS 610
             P+  R+PRG      L      P+EIGKG++L  G DV ++GYG+MV + L+A  +LS
Sbjct: 470 KGPIAMRFPRGNGYGVPLMEEGWEPLEIGKGEILRNGDDVLMIGYGSMVNSTLQAAEILS 529

Query: 611 KLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDS 669
           + GI+ TV +ARFCKPLD +L+  L +    ++T+EEG + GGFGS V+     + L+D+
Sbjct: 530 EHGIEATVINARFCKPLDTELMFPLAKKIGRVVTLEEGCVMGGFGSAVA-----EALIDA 584

Query: 670 G--VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALS 708
              V  +   +PD  ++HA+P +  A  GLT   IA   L 
Sbjct: 585 DILVPIKRFGVPDILVDHATPDESKAELGLTSPQIAQRILK 625


>gi|386389470|ref|ZP_10074284.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus
           paraphrohaemolyticus HK411]
 gi|385695240|gb|EIG25802.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus
           paraphrohaemolyticus HK411]
          Length = 617

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 252/636 (39%), Positives = 375/636 (58%), Gaps = 30/636 (4%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+L  + +P  L+ L   +L+ LA E+R+ L   VS++   L S L  VELTVALH+V+ 
Sbjct: 6   PLLSQINSPEDLRLLNKDQLQPLADELRAYLLECVSQSSGHLASGLGVVELTVALHYVYQ 65

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG Q Y HKILTGRR  I T+R+KDGI  +  R ES YD  + GH   S+S
Sbjct: 66  TPFDQLIWDVGHQAYPHKILTGRRDQIKTIRQKDGIHPFPWREESVYDVLSVGHSSTSIS 125

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           AGLG+AVA + +      V VI +G   AG A+EA+++AG L ++M+VILND+  S+   
Sbjct: 126 AGLGIAVAAEKENVGRKTVCVIGDGAITAGMAFEALNHAGALHTDMLVILNDNEMSI--- 182

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                  ++ AL++ L+RI S   +  +R+ +K +  ++   +  +  K +E+ +G+I  
Sbjct: 183 -----SENVGALNNHLARIFSGSLYTTMRDGSKKILDKVPT-IKNFMKKSEEHMKGVIFS 236

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             STLFEELG  YIGP+DGHNI+DL+  L+ +  L   GP  +H+ T++ +  +  +   
Sbjct: 237 PESTLFEELGFNYIGPIDGHNIDDLVKTLENMRDL--KGPQFLHIRTKKGKGYQPAENDP 294

Query: 380 -AIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQ 438
                  +   +S  LP      TY D F   L   A +D  ++ +   M     +  F 
Sbjct: 295 IGFHGVPKFDPESGKLPKTKTIPTYSDIFGNWLCEIAIQDPKLIGITPAMREGSGMVEFS 354

Query: 439 EKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRF 498
           ++FPE+YFDV +AEQHAVTF+ GLA  G KP   I S+FLQRAYDQ+++DV  Q LPV F
Sbjct: 355 KRFPEQYFDVAIAEQHAVTFATGLAIAGFKPVVAIYSSFLQRAYDQLIHDVAIQNLPVIF 414

Query: 499 VITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRY 558
            I  AG+VG+DG T  GAFD++FM C+PNM +M PSDE+E+  M+ T  S+ + P   RY
Sbjct: 415 AIDRAGIVGADGQTHQGAFDLSFMRCIPNMTIMTPSDENEMRQMLFTAYSM-NTPTAVRY 473

Query: 559 PRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTV 618
           PRG     +L   +   +E+GKG+++ +GK VA+L +G M+       A +     + T+
Sbjct: 474 PRGNAQGVELQPMQ--VLEVGKGRLIRKGKKVAILNFGTMLH-----EAQIVAERNNYTL 526

Query: 619 ADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVKWRPIV 677
           AD RF KP+D +L+++L  +H  L+T+EE +I GG GS V+ +      L S  K +P+ 
Sbjct: 527 ADMRFVKPIDGELIKQLADSHDLLVTLEENAIQGGAGSAVNEY------LQSINKIKPLA 580

Query: 678 L---PDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
           +   PD++I  A+  +  A  GL    I    L+LL
Sbjct: 581 MLGIPDHFIPQATQPEAYAEIGLNAEGIEQKILALL 616


>gi|387886594|ref|YP_006316893.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella noatunensis
           subsp. orientalis str. Toba 04]
 gi|386871410|gb|AFJ43417.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella noatunensis
           subsp. orientalis str. Toba 04]
          Length = 618

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 253/632 (40%), Positives = 370/632 (58%), Gaps = 25/632 (3%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           ILD +  P  LK +   +LK+LA E+R+ L   +  +     SSL A ELTVALH+V++ 
Sbjct: 6   ILDKINTPADLKLVPEGQLKELASELRTFLVDTLDVSGGHFASSLGATELTVALHYVYNT 65

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D I+WDVG QTY HKILTGR+  + T++K  GISG+ +RSESEYD F  GH   S+SA
Sbjct: 66  PYDNIVWDVGHQTYIHKILTGRKDKLITIKKDGGISGFPNRSESEYDTFGVGHSSTSISA 125

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKI 260
            LGMA+A  ++GK    + VI +G    G A+EA+++AG +  +++VILND+        
Sbjct: 126 ALGMAIADRLQGKHSNSIAVIGDGAITGGMAFEALNHAGGIKEDILVILNDN-------- 177

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQ 320
           E S   ++  LS+  S+I S   +  +RE  K + K I   M E+  K++   +GM  P 
Sbjct: 178 EMSISDNVGGLSAHFSKIISGGFYNSIREKGKEVLKNI-PPMFEFVKKIETQTKGMFVP- 235

Query: 321 GSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSEA 380
            +  FE+LG YY+GP+DGHN+ +L+  L+ +      GP L+HV+T++ +     + S+ 
Sbjct: 236 -ANFFEDLGFYYVGPIDGHNVVELVKTLRILKD--HRGPKLLHVITKKGKGYTKAE-SDP 291

Query: 381 IEKQQEGASDSNSLPFGNYSR-TYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQE 439
           I+      S  +       SR TY + F   +  +A KD+ +V V   M+    L  F +
Sbjct: 292 IKFHHVAPSFHSGDAQSKASRLTYSNIFGNWICQKAAKDERLVGVTPAMKEGSDLIRFSQ 351

Query: 440 KFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFV 499
           ++P RYFDV +AEQHAVTF+ GLAC GLKP   I S FLQRAYDQV++D+  Q L V + 
Sbjct: 352 QYPNRYFDVAIAEQHAVTFAGGLACQGLKPIVAIYSTFLQRAYDQVIHDIALQDLDVLYA 411

Query: 500 ITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYP 559
           +  AGLVG+DG T  G+FDI+FM C+PN ++M PSDE+E   M+         P   RYP
Sbjct: 412 VDRAGLVGADGATHDGSFDISFMRCIPNHVIMTPSDENETYHMLELGYEYKG-PAMVRYP 470

Query: 560 RGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVA 619
           RGA +  ++     + IE+GK K++ +G  VA+L +G ++     A  L +K   D+TV 
Sbjct: 471 RGAGIGAEIT--DNLDIELGKAKLVKKGSRVAILNFGTLLP---LANQLANKY--DITVV 523

Query: 620 DARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVKWRPIVL 678
           D RF KPLD +++ ++CQNH  + T+EE SI GG GS V+ +I  +  L   +  R   L
Sbjct: 524 DMRFVKPLDEQMINQICQNHNIVFTLEENSIAGGAGSAVNEYIFAND-LSKNITVRNFGL 582

Query: 679 PDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
            D ++ H +    L  + L+ + IA     LL
Sbjct: 583 KDEFLTHGTKDLLLDHSNLSFNKIAEVLEKLL 614


>gi|256752078|ref|ZP_05492946.1| deoxyxylulose-5-phosphate synthase [Thermoanaerobacter ethanolicus
           CCSD1]
 gi|256749088|gb|EEU62124.1| deoxyxylulose-5-phosphate synthase [Thermoanaerobacter ethanolicus
           CCSD1]
          Length = 620

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 249/643 (38%), Positives = 378/643 (58%), Gaps = 32/643 (4%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L+ +++P  LK L  K+   +  EIR  L   VSKT   L S+L  VELT+ALH+VF++
Sbjct: 1   MLEQIDSPYDLKKLDKKDFPLICEEIRQFLIEKVSKTGGHLASNLGIVELTIALHYVFNS 60

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           PVDKI+WDVG Q Y HK+LTGR+    TLRK +G+SGYT R+ES +D F AGH   S+SA
Sbjct: 61  PVDKIIWDVGHQCYVHKMLTGRKDQFDTLRKFNGLSGYTKRTESVHDIFGAGHSSTSISA 120

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKI 260
            LG+A ARD+KG++  +V VI +G    G A+EA++NAG   +++IV+LN +  S+    
Sbjct: 121 ALGIAKARDLKGEKYSVVAVIGDGALTGGMAFEALNNAGRSKTDLIVVLNHNEMSI---- 176

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTK---RIGRGMHEWAAKVDEYARGMI 317
                 ++ +LS  LS++++  ++ +L++    +      IG+ +H++  ++ +  + ++
Sbjct: 177 ----SENVGSLSLYLSKLRTDPTYNKLKQEVDNLLNIVPPIGKSLHKYIERIKDSVKQLV 232

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQK 377
            P     FEE+G  Y+GP+DGH++  LI VL+    +   GP+LVHV+T++ +  +  +K
Sbjct: 233 VP--GMFFEEMGFTYLGPIDGHDVGSLIEVLERAKKI--KGPILVHVITKKGKGYKFAEK 288

Query: 378 SEAIEKQQEGAS-DSNSLPFGNYSR-TYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQ 435
               +K    A  D  +  F N  + TY D F + L   A KD  IV + A M     L 
Sbjct: 289 FP--DKFHSAAPFDIQTGKFVNEGQATYSDVFGKTLTEMALKDDKIVAITAAMPEGTGLI 346

Query: 436 LFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLP 495
            F +  PER+FDVG+AEQHA TF+AG+A  G KP+  + S FLQRAYDQ+++DV  Q+LP
Sbjct: 347 HFAKLIPERFFDVGIAEQHATTFAAGMAVQGYKPYFAVYSTFLQRAYDQLIHDVCIQKLP 406

Query: 496 VRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVC 555
           V F I  AG+VG DG T  G FD++++  +PN+ +M+P D +ELV+MV    ++ + PV 
Sbjct: 407 VVFAIDRAGIVGEDGETHQGVFDLSYLRPIPNIAIMSPKDANELVEMVKLSRNL-EFPVA 465

Query: 556 FRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGID 615
            RYPRG     D+   R   IE GK +++ EGK++A+   G MV   L+A+ +L    + 
Sbjct: 466 IRYPRGKAGEFDIT--RECSIEFGKAELVTEGKEIAIFALGRMVGKVLEAKEILKVSDLQ 523

Query: 616 VTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVKWR 674
             + + RF KPLD +L+ ++     F++TVE+  I GG GS      A+  LL+S   ++
Sbjct: 524 PFIVNLRFVKPLDEELILDISNKVKFIVTVEDNVIAGGVGS------AILELLNSNGIYK 577

Query: 675 PIV---LPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTR 714
           P++    PD +IEH           L    IA T L      R
Sbjct: 578 PVLRLGFPDKFIEHGDVENLFKKYNLDAESIANTILQKYKEMR 620


>gi|296133202|ref|YP_003640449.1| deoxyxylulose-5-phosphate synthase [Thermincola potens JR]
 gi|296031780|gb|ADG82548.1| deoxyxylulose-5-phosphate synthase [Thermincola potens JR]
          Length = 638

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 249/615 (40%), Positives = 371/615 (60%), Gaps = 24/615 (3%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+L+ ++ P  LK L++ +L  LA E+R +L  +VS+T   L  +L  VELT+ALH+VF
Sbjct: 3   TPLLNQIKTPEDLKRLSLDDLNILARELRQKLIHVVSRTGGHLAPNLGVVELTLALHYVF 62

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
            AP DKI+WDVG Q+Y HK+L+GR+    TLR+  G+SG+  RSESEYD FN GH   S+
Sbjct: 63  DAPRDKIVWDVGHQSYVHKLLSGRQQEFDTLRQYGGLSGFPKRSESEYDSFNTGHSSTSI 122

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LGMA+ARD+K +   ++ VI +G    G A+EA+++AG+L +N+IV+LND+      
Sbjct: 123 SAVLGMALARDLKKENFHVIAVIGDGALTGGMAFEALNHAGHLGTNIIVVLNDN------ 176

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKR---IGRGMHEWAAKVDEYARG 315
             E S   ++ ALS  LSR+++   + + +E  + + K+   IG  + +   ++ +  + 
Sbjct: 177 --EMSISENVGALSGYLSRMRTDPMYNRHKEEMENLLKKIPSIGPTVFKAIERIKDSFKY 234

Query: 316 MIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDT 375
           ++ P    +FEELG  Y+GP+DGHNI ++ +VL+      + GP++VHVVT + +  E  
Sbjct: 235 LVVP--GMIFEELGFTYLGPIDGHNIMEVKTVLERAKR--TKGPIMVHVVTRKGKGYEPA 290

Query: 376 QKSEAIEKQQEGASDSNSLPFGNYS-RTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
           +K+          + +   P    S  +Y + F + L   A  D+ ++ + A M     L
Sbjct: 291 EKNPDRFHGIGPFNINTGEPVSASSVVSYTEIFGKTLCQLAADDERLLAITAAMPTGTGL 350

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F E FP+R+FDVG+AEQHAVT +AGLA  G +P   I S FLQRAYDQ+++DV  Q L
Sbjct: 351 TRFAELFPDRFFDVGIAEQHAVTLAAGLATEGFRPVVAIYSTFLQRAYDQILHDVAMQDL 410

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PV F +  AGLVG DG T  G +D  ++  +PNM++MAP DE+EL  M+ T A + D+PV
Sbjct: 411 PVIFAVDRAGLVGEDGETHQGIYDFAYLRHIPNMVIMAPKDENELRFMLKT-AQLLDKPV 469

Query: 555 CFRYPRGAIVRTDLP-GYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
             RYPRG+ +   +    + IP  +GK +VL +GKD+AL   G +V   L A   L + G
Sbjct: 470 AIRYPRGSGIGVQISEEIKDIP--VGKAEVLRDGKDIALFAIGPLVYEALAAAESLHEHG 527

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVK 672
           I+V V + RF KPLD++ + E  +    +IT+EE ++ GGFGS V   +   GL      
Sbjct: 528 IEVAVVNCRFIKPLDVETITEYTRKTGKVITLEEHALEGGFGSAVLELLQEQGLR---AH 584

Query: 673 WRPIVLPDNYIEHAS 687
              I LPD +IE  +
Sbjct: 585 VERIGLPDRFIEQGA 599


>gi|348617927|ref|ZP_08884461.1| 1-deoxy-D-xylulose-5-phosphate synthase
           (1-deoxyxylulose-5-phosphate synthase) (DXP synthase)
           (DXPS) [Candidatus Glomeribacter gigasporarum BEG34]
 gi|347816871|emb|CCD29115.1| 1-deoxy-D-xylulose-5-phosphate synthase
           (1-deoxyxylulose-5-phosphate synthase) (DXP synthase)
           (DXPS) [Candidatus Glomeribacter gigasporarum BEG34]
          Length = 636

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 264/648 (40%), Positives = 384/648 (59%), Gaps = 59/648 (9%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+L  +++P  L+SL  + LKQLA E+R+ +   VS+T   L S+L  VELT+ALH+VF+
Sbjct: 5   PLLKTIDDPAALRSLDRRALKQLADELRAFVLESVSRTGGHLSSNLGTVELTIALHYVFN 64

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+I+WDVG QTY HKILTGRR+ + TLR++ G+SG+  R ESEYD F   H   S+S
Sbjct: 65  TPHDRIVWDVGHQTYPHKILTGRRAAMATLRQQGGLSGFPRRCESEYDAFGTAHSSTSIS 124

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDS-NMIVILNDSRHSLHP 258
           A LGMA+A  +K +    + VI +G   AG A+EAM++AG  D   +IV+LND+  S+ P
Sbjct: 125 AALGMALASRLKDESRFCIAVIGDGAMSAGMAFEAMNHAGVCDDLPLIVVLNDNDMSISP 184

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                   ++ AL+  L+R+ S + +   ++  + +  R+   + E+A + +E+A+GM+ 
Sbjct: 185 --------AVGALNRYLARLMSGRFYAAAKKGVETVL-RVAPPVLEFARRFEEHAKGMVV 235

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
           P  +TLFE LG  YIGP+DGH+++ LI  L  + +L   GP  +HVVT   ++ +  + +
Sbjct: 236 P--ATLFEALGFNYIGPIDGHDLDSLIPTLNNLKAL--KGPQFLHVVT---KKGQGYKLA 288

Query: 379 EAIEKQQEGASDSNSLP--------FGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
           EA           N L              +TY   F E L   A +D  IV +   M  
Sbjct: 289 EADPVLYHAPGQFNPLDGVQPKSARRSAARKTYTQVFGEWLCEAAARDARIVGITPAMRE 348

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L  F+ +FPERY+DVG+AEQHA+T + GLA  GLKP   I S FLQRAYDQ+++D+ 
Sbjct: 349 GSGLVEFERRFPERYYDVGIAEQHALTLAGGLAVEGLKPVVAIYSTFLQRAYDQLIHDIA 408

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q+LPV F I  AG+VG+DG T  GA+D+ F+ C+PN+ VMA SDE+E   M+ T A ++
Sbjct: 409 LQKLPVVFAIDRAGVVGADGATHMGAYDLAFLRCIPNLTVMAASDENECWQMLNTAAQLN 468

Query: 551 DRPVCFRYPRGAIVRTDLPG------YRGIPIEIGKGKVLVE-----GKDVALLGYGAMV 599
             P   RYPRG+      PG       R +P  IG+G++  E     G+ +A+L +G MV
Sbjct: 469 G-PAAVRYPRGSG-----PGAPVFKHARALP--IGRGEMRRESAQPCGQRIAILAFGTMV 520

Query: 600 QNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVS 658
                A++L++   +D +VA+ RF KPLD  LV +L Q H  L+TVEEG + GG GS   
Sbjct: 521 -----AQSLIAAEQLDASVANMRFVKPLDQTLVVQLAQTHDALVTVEEGCVMGGAGS--- 572

Query: 659 HFIALDGLLDSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIA 703
               ++ LL  G++ RP++   L D +I+H  P + L   GL G  IA
Sbjct: 573 --ACIESLLAHGIE-RPMLQLGLSDRFIDHGDPARLLTDHGLDGEGIA 617


>gi|386817455|ref|ZP_10104673.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thiothrix nivea DSM 5205]
 gi|386422031|gb|EIJ35866.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thiothrix nivea DSM 5205]
          Length = 630

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 255/627 (40%), Positives = 367/627 (58%), Gaps = 39/627 (6%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L+ +  P  L+ L ++ L  L  E+R  L   VS       S+L  VELTVALH+ F  
Sbjct: 1   MLERINFPADLRRLELEALPALCAELREFLLDSVSNGGGHFSSNLGTVELTVALHYAFDT 60

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P DK++WDVG Q Y HKILTGRR L+ ++R+KDG++G+  RSESEYD F  GH   S+SA
Sbjct: 61  PQDKLVWDVGHQAYPHKILTGRRDLMDSIRQKDGLAGFPKRSESEYDTFGVGHSSTSISA 120

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKI 260
            LGMA+A   KG+    + +I +G   AG AYEA+++AG LD+N+IV+LND+  S+ P  
Sbjct: 121 ALGMALAAQQKGEDYHSIAIIGDGAMTAGMAYEALNHAGDLDANLIVVLNDNEMSISP-- 178

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQ 320
                 ++ AL   L+R+ S + +  +RE  K       + + +     +E+ +GM+ P 
Sbjct: 179 ------NVGALRKYLTRLLSGRMYSSMRESGKKALSH-SKSLSKLVKLTEEHMKGMVLP- 230

Query: 321 GSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSEA 380
             TLFEE+G  Y GP+DGH++E+L+ VL+ +  +   GP L+H++T++ +  E  ++   
Sbjct: 231 -GTLFEEMGFKYYGPIDGHDVEELVHVLENLKQI--KGPRLLHILTQKGKGYEPAEEDPC 287

Query: 381 IE--------KQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
                     K    +S   S P      TY   F + L   A +DK +V +   M    
Sbjct: 288 AYHGVTPFNLKTGLVSSSKKSTP------TYTQVFGQWLCDMAAQDKRLVGITPAMREGS 341

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            L  F E+FP+RYFDVG+AEQHAVT +AGLAC GLKP   I S FLQRAYDQ+++DV  Q
Sbjct: 342 GLVAFSEQFPQRYFDVGIAEQHAVTLAAGLACEGLKPVVAIYSTFLQRAYDQLLHDVAIQ 401

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
            LPV F +  AGLVG+DGPT  G +D++F+ C+PNM+VMAP+DE+E   M+ T   + D 
Sbjct: 402 NLPVVFAVDRAGLVGADGPTHSGNYDLSFLRCVPNMVVMAPADENECRQMLYTAFQL-DC 460

Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEIGKG-KVLVEGKDVALLGYGAMVQNCLKARALLSK 611
           P   RYPRG     + P      + +GK  KV   G  +A+L +G+++     A   L  
Sbjct: 461 PTAVRYPRGKGTGIE-PHTEMQAMPVGKAVKVRNGGNSIAILLFGSLLAEARAAAEELDA 519

Query: 612 LGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSG 670
                T+ + RF KPLD  ++REL Q+H  L+T+E+ ++ GG GS V+ ++   GL    
Sbjct: 520 -----TLVNMRFVKPLDKTILRELAQSHELLVTLEDNAVMGGAGSAVNEYLHEAGL---A 571

Query: 671 VKWRPIVLPDNYIEHASPTQQLALAGL 697
           V+   + LPD YIEHA   +QLA  GL
Sbjct: 572 VEVMNLGLPDVYIEHAQREEQLAACGL 598


>gi|425453817|ref|ZP_18833570.1| 1-deoxy-D-xylulose-5-phosphate synthase [Microcystis aeruginosa PCC
           9807]
 gi|389800158|emb|CCI20423.1| 1-deoxy-D-xylulose-5-phosphate synthase [Microcystis aeruginosa PCC
           9807]
          Length = 636

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 251/639 (39%), Positives = 369/639 (57%), Gaps = 29/639 (4%)

Query: 82  LDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAP 141
           L  + +P +L  L++++L+ +A +IR +    ++ T   L   L  VELT+AL+      
Sbjct: 3   LSEITHPNQLHGLSLRQLEDIARQIREKHLQTIAATGGHLGPGLGVVELTIALYQTLDLD 62

Query: 142 VDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAG 201
            DK+LWDVG Q Y HK+LTGR +  HTLR+K+G++GY  R ES++D F AGH   S+SAG
Sbjct: 63  RDKVLWDVGHQAYPHKLLTGRYNDFHTLRQKNGVAGYLKRCESKFDHFGAGHASTSISAG 122

Query: 202 LGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPKI 260
           LGMA+ARD KG+   +V++I +G    G A EA+++AG+L ++N++VILND+  S+ P  
Sbjct: 123 LGMALARDAKGEDFKVVSIIGDGALTGGMALEAINHAGHLPNTNIMVILNDNEMSISP-- 180

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRI---GRGMHEWAAKVDEYARGMI 317
                 ++ A+S  L++++ S+  + + +  +   K +   G  +     +V E  + + 
Sbjct: 181 ------NVGAISRYLNKVRLSEPVQFIADNLEEQLKHLPFFGDSLTPEMERVKEGMKRLA 234

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQK 377
            P+   + EELG  Y GP+DGHNI +LI+  ++   +   GPV VHV T + +  E  +K
Sbjct: 235 VPKVGAVIEELGFKYFGPIDGHNIPELIATFKQAHKV--HGPVFVHVATVKGKGYEWAEK 292

Query: 378 SEAIEKQQEG---ASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
            +     Q     A+             Y   F   L   AE D  I+ + A M     L
Sbjct: 293 DQVGYHAQNPFNLATGKPIPSSKPKPPAYSKVFGHTLTKLAENDPRIIGITAAMATGTGL 352

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             FQ K P++Y DVG+AEQHAVT + GLAC G++P   I S FLQRA+DQ+++D+  Q L
Sbjct: 353 DKFQAKLPKQYIDVGIAEQHAVTLAGGLACEGMRPVVTIYSTFLQRAFDQIIHDICIQNL 412

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PV F +  AG+VG+DGPT  G +DI ++ C+PNM +MAP DE EL  MV T  +    P+
Sbjct: 413 PVFFCMDRAGIVGADGPTHQGMYDIAYLRCIPNMTIMAPKDEAELQRMVVTGINHTSGPI 472

Query: 555 CFRYPRGAIVRTDL--PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
             RYPRG  +   L   G+  +P  IGKG++L  G DV LLGYG MV   L+   +LS+ 
Sbjct: 473 AMRYPRGNGLGVPLMEEGWEALP--IGKGEILRSGDDVLLLGYGTMVNTSLQVAEILSEH 530

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSG- 670
           GI+ TV +ARF KPLD +L+  L Q    ++T+EEG + GGFGS V     L+ L D+  
Sbjct: 531 GIEATVVNARFVKPLDTELIFPLAQRLGKVVTLEEGCLMGGFGSAV-----LEALQDANI 585

Query: 671 -VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALS 708
            V  +   +PD  ++HA P +  A  GLT   IA   L+
Sbjct: 586 LVPVKRFGVPDKLVDHAKPEESFADLGLTSPQIAEQVLA 624


>gi|422303007|ref|ZP_16390363.1| 1-deoxy-D-xylulose-5-phosphate synthase [Microcystis aeruginosa PCC
           9806]
 gi|425472446|ref|ZP_18851287.1| 1-deoxy-D-xylulose-5-phosphate synthase [Microcystis aeruginosa PCC
           9701]
 gi|389792067|emb|CCI12161.1| 1-deoxy-D-xylulose-5-phosphate synthase [Microcystis aeruginosa PCC
           9806]
 gi|389881473|emb|CCI37979.1| 1-deoxy-D-xylulose-5-phosphate synthase [Microcystis aeruginosa PCC
           9701]
          Length = 636

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 250/639 (39%), Positives = 370/639 (57%), Gaps = 29/639 (4%)

Query: 82  LDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAP 141
           L  + +P +L  L++++L+ +A +IR +    ++ T   L   L  VELT+AL+      
Sbjct: 3   LSEITHPNQLHGLSLRQLEDIARQIREKHLQTIAATGGHLGPGLGVVELTIALYQTLDLD 62

Query: 142 VDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAG 201
            DK+LWDVG Q Y HK+LTGR +  HTLR+K+G++GY  R ES++D F AGH   S+SAG
Sbjct: 63  RDKVLWDVGHQAYPHKLLTGRYNDFHTLRQKNGVAGYLKRCESKFDHFGAGHASTSISAG 122

Query: 202 LGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPKI 260
           LGMA+ARD KG+   +V++I +G    G A EA+++AG+L ++N++VILND+  S+ P  
Sbjct: 123 LGMALARDAKGEDFKVVSIIGDGALTGGMALEAINHAGHLPNTNIMVILNDNEMSISP-- 180

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRI---GRGMHEWAAKVDEYARGMI 317
                 ++ A+S  L++++ S+  + + +  +   K +   G  +     +V E  + + 
Sbjct: 181 ------NVGAISRYLNKVRLSEPVQFIADNLEEQFKNLPFFGDSLTPEMERVKEGMKRLA 234

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQK 377
            P+   + EELG  Y GP+DGHNI +LI+  ++   +   GPV VHV T + +  E  +K
Sbjct: 235 VPKVGAVIEELGFKYFGPIDGHNIPELIATFKQAHKV--HGPVFVHVATVKGKGYEWAEK 292

Query: 378 SEAIEKQQEG---ASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
            +     Q     A+             Y   F   L   AE D  I+ + A M     L
Sbjct: 293 DQVGYHAQNPFNLATGKPIPSSKPKPPAYSKVFGHTLTKLAENDPRIIGITAAMATGTGL 352

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             FQ K P++Y DVG+AEQHAVT + GLAC G++P   I S FLQRA+DQ+++D+  Q L
Sbjct: 353 DKFQAKLPKQYIDVGIAEQHAVTLAGGLACEGMRPVVTIYSTFLQRAFDQIIHDICIQNL 412

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PV F +  AG+VG+DGPT  G +DI ++ C+PNM +MAP DE EL  MV T  +    P+
Sbjct: 413 PVFFCMDRAGIVGADGPTHQGMYDIAYLRCIPNMTIMAPKDEAELQRMVVTGINHTSGPI 472

Query: 555 CFRYPRGAIVRTDL--PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
             RYPRG  +   L   G+  +P  IGKG++L  G D+ LLGYG MV   L+   +LS+ 
Sbjct: 473 AMRYPRGNGLGVPLMEEGWEALP--IGKGEILRSGDDILLLGYGTMVNTSLQVAEILSEH 530

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSG- 670
           GI+ TV +ARF KPLD +L+  L Q    ++T+EEG + GGFGS V     L+ L D+  
Sbjct: 531 GIEATVVNARFVKPLDTELIFPLAQRLGKVVTLEEGCLMGGFGSAV-----LEALQDANI 585

Query: 671 -VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALS 708
            V  +   +PD  ++HA+P +  A  GLT   IA   L+
Sbjct: 586 LVPVKRFGVPDKLVDHATPEESFADLGLTSPQIAQQVLA 624


>gi|428303915|ref|YP_007140740.1| 1-deoxy-D-xylulose-5-phosphate synthase [Crinalium epipsammum PCC
           9333]
 gi|428245450|gb|AFZ11230.1| 1-deoxy-D-xylulose-5-phosphate synthase [Crinalium epipsammum PCC
           9333]
          Length = 636

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 251/635 (39%), Positives = 378/635 (59%), Gaps = 29/635 (4%)

Query: 82  LDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAP 141
           L  +++P +L  L+I++L+Q+A +IR +    V+ +   L   L  VELT+AL+      
Sbjct: 3   LSEIKHPNQLHGLSIRQLEQIARQIREKHLQTVATSGGHLGPGLGVVELTLALYQTLDLD 62

Query: 142 VDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAG 201
            DK++WDVG Q Y HK++TGR    HT+R+KDG++GY  R ES++D F AGH   S+SA 
Sbjct: 63  RDKVIWDVGHQAYPHKLITGRYDRFHTIRQKDGVAGYLKRCESKFDHFGAGHASTSISAA 122

Query: 202 LGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPKI 260
           LGMA+A ++ G+    V VI +G    G A EA+++AG+L  + ++V+LND+  S+ P  
Sbjct: 123 LGMALAGELNGENFKSVAVIGDGALTGGMALEAINHAGHLPKTKLLVVLNDNEMSISP-- 180

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRI---GRGMHEWAAKVDEYARGMI 317
                 ++ A+   L++++ S   + L++  +   K I   G  +     +V E  + + 
Sbjct: 181 ------NVGAIPRYLNKMRLSAPVQFLKDNLEEQFKHIPFVGDSLTPELERVKEGMKRLA 234

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRR---AED 374
            P+   +FEELG  Y+GPVDGHN+E+LI+  ++  ++   GPVLVHVVT + +    AE 
Sbjct: 235 VPKVGAVFEELGFTYMGPVDGHNLEELINTFKQAHTI--TGPVLVHVVTVKGKGYAIAEQ 292

Query: 375 TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
            Q     +     A+   +        +Y   F E L+  AE++  IV + A M     L
Sbjct: 293 DQVGYHAQSPFNLATGKPNPSSKPKPPSYSKVFAETLIKLAEENPKIVAITAAMATGTGL 352

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             FQ K P++Y DVG+AEQHAVT +AGLAC G++P   I S FLQR +DQ+++DV  Q+L
Sbjct: 353 DKFQAKLPKQYIDVGIAEQHAVTLAAGLACEGMRPLAAIYSTFLQRGFDQIIHDVCIQKL 412

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PV F +  AG+VG+DGPT  G +DI ++ C+PN+++MAP DE EL  M+ T     D P+
Sbjct: 413 PVFFCMDRAGIVGADGPTHQGMYDIAYLRCIPNIVLMAPKDEAELQQMLVTGIEYTDGPI 472

Query: 555 CFRYPRGAIVRTDL--PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
             RYPRG      L   G+  +P  IGK ++L +G DV +LGYG+MV   ++A  LLS+ 
Sbjct: 473 ALRYPRGNGYGVPLMEEGWETLP--IGKAEILRQGDDVLMLGYGSMVYPTMQAAELLSEH 530

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-IGGFGSHVSHFIALDGLLDSG- 670
           GI+ TV +ARF KPLD +L+  L Q    ++T+EEG  IGGFGS ++     + LLD+  
Sbjct: 531 GIEATVVNARFAKPLDTELILPLAQKIGKVVTLEEGCLIGGFGSAIA-----ESLLDNNV 585

Query: 671 -VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAA 704
            V  + I +PD  ++HA+P + +   GLT   IAA
Sbjct: 586 VVPLQRIGVPDILVDHATPEESIVALGLTPAQIAA 620


>gi|188996591|ref|YP_001930842.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sulfurihydrogenibium sp.
           YO3AOP1]
 gi|188931658|gb|ACD66288.1| deoxyxylulose-5-phosphate synthase [Sulfurihydrogenibium sp.
           YO3AOP1]
          Length = 631

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 246/618 (39%), Positives = 360/618 (58%), Gaps = 34/618 (5%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+L+ + N   LK+L  +E+++L  +IRS +  + S     +  SL  VELTVAL   F 
Sbjct: 5   PMLEKINNYKDLKNLNKEEIEKLCEDIRSYIIDVTSLNGGHIGPSLGTVELTVALLMAFD 64

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
              DKI+WDVG QTYA+KILT R+    TLR+  GISG++   ES+YD F  GH   S+S
Sbjct: 65  PEKDKIVWDVGHQTYAYKILTDRKEQFRTLRQYKGISGFSKIKESKYDHFGTGHSSTSIS 124

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLD-SNMIVILNDSRHSLHP 258
           A LG  V +D+K      + VI +G   AGQA+E ++NAG+LD S  IVILND++ S+ P
Sbjct: 125 AALGFRVGKDLKKDDVYTIAVIGDGAMTAGQAFEGLNNAGWLDPSRFIVILNDNQMSISP 184

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAK-GMTKRIGRGMHEWAAKVDEYARGMI 317
                   ++ A+ +  ++I + + F++ R+  K  + K  G    +   K++EY +G+ 
Sbjct: 185 --------NVGAIYTYFNKIITKQVFQKPRQKLKEAINKIFGEQGVKIFRKIEEYTKGLF 236

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQK 377
            P    +FEELG  Y+GP+DGH++ DL   L+ +  +   GP+L+HV+T++ +  +  ++
Sbjct: 237 AP--GLIFEELGFTYVGPIDGHSLFDLEQTLENIKQM--RGPILLHVITQKGKGYKYAEE 292

Query: 378 SEA-------IEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
           +          +K     + S++LP      TY   F +ALV  AEKD  IV +   M+ 
Sbjct: 293 NPTTFHGVSPFDKISGVFNKSSNLP------TYSKVFGDALVELAEKDDKIVAITPAMKE 346

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L  F EKFP+R+FDVG+AEQHA TF+  LA  G KP     S FLQRAYDQV++D+ 
Sbjct: 347 GSGLVKFAEKFPDRFFDVGIAEQHAATFAGALALEGFKPVAAYYSTFLQRAYDQVIHDIA 406

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q LPV F I   GLVG DGPT  G FDI F+  +PNMI+ +P DE EL D++  +    
Sbjct: 407 LQELPVFFAIDRGGLVGDDGPTHHGVFDIAFLRPIPNMIIASPKDEQELRDLL-YIGLNS 465

Query: 551 DRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLS 610
            RP   RYPRG      + G+    IEIG  ++L EG+D+A+L  G  V   L+ +  L 
Sbjct: 466 KRPFALRYPRGTGYGVKIEGFN--TIEIGSWEILDEGRDIAILAVGKYVYRALEVKKQLR 523

Query: 611 KLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDS 669
             G + TV +ARF KP+D  L+ +L + H F+IT E+G + GGFGS V+ F+  +G  + 
Sbjct: 524 LKGFNPTVVNARFIKPMDENLLNKLLKTHEFVITAEDGVLNGGFGSAVAEFVIDNGYSNK 583

Query: 670 GVKWRPIVLPDNYIEHAS 687
            +++    +PD +IEH  
Sbjct: 584 VLRFG---IPDKFIEHGK 598


>gi|222056744|ref|YP_002539106.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter daltonii FRC-32]
 gi|221566033|gb|ACM22005.1| deoxyxylulose-5-phosphate synthase [Geobacter daltonii FRC-32]
          Length = 636

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 264/656 (40%), Positives = 371/656 (56%), Gaps = 63/656 (9%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           IL+ + +P  LK+L   EL  LA EIR  L   VS+T   L S+L  VELT+ALH+ F++
Sbjct: 4   ILNRINSPADLKTLKEDELLLLAGEIRQFLLDTVSRTGGHLASNLGCVELTLALHYCFNS 63

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D I+WDVG Q Y HKILTGRR + HT R+  GISG+  RSES +D F AGH   S+SA
Sbjct: 64  PSDSIIWDVGHQAYTHKILTGRRDVFHTQRQYQGISGFPKRSESAHDAFGAGHSSTSISA 123

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKI 260
           GLGMAVA  +KG    ++ VI +G+   G A+EA++ AG+L  N++V+LND+        
Sbjct: 124 GLGMAVANCLKGDPSKVIAVIGDGSLTGGMAFEALNQAGHLRKNLVVVLNDN-------- 175

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKR---IGRGMHEWAAKVDEYARGMI 317
           E S   ++ ALS+ +SR  +   +R L++  + + +    IG  +  +A K +   +G +
Sbjct: 176 EMSISKNVGALSTFISRKLTGNYYRDLKKEMQRLLQNIPAIGGNILHFARKAENSLKGFL 235

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRR---AED 374
            P   TLFE LG  YIGPV GH++  LI ++Q V SL   GPVLVHVVT + +    AED
Sbjct: 236 TP--GTLFEALGFEYIGPVHGHDLPQLIEIMQNVRSL--EGPVLVHVVTTKGKGYQPAED 291

Query: 375 TQ-----------KSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVV 423
           T            K+  +   + GA+            +Y   F + L   AE+D+ IV 
Sbjct: 292 TPDKFHGVGPFDIKTGKVTGGKPGAA------------SYTGIFGDTLCKLAEEDEKIVA 339

Query: 424 VHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYD 483
           + A M     L  F   FP+R+FDVG+AEQHA+TF+AG+A  G +P   I S F QRAYD
Sbjct: 340 ITAAMPDGTGLTKFSRTFPDRFFDVGIAEQHALTFAAGMATEGFRPVAAIYSTFAQRAYD 399

Query: 484 QVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMV 543
           Q+ +D+  Q+LPV   +  AGLVG DGPT  G FD++++  LP M VMAP DE+EL  M+
Sbjct: 400 QIFHDICLQKLPVTLALDRAGLVGDDGPTHHGVFDLSYLRHLPEMTVMAPKDENELQHML 459

Query: 544 ATVASIDDRPVCFRYPRGA--------IVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGY 595
            T A   D+P+  RYPRGA        I++T         I +G  + L +G+D+ L+  
Sbjct: 460 KT-AIYSDQPIALRYPRGAGYGVAMDSILKT---------IPLGVAEQLAKGEDITLIAI 509

Query: 596 GAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFG 654
           G+ V   ++A   L   GI   V +ARF KPLD  L+         ++TVEE ++ GGFG
Sbjct: 510 GSTVYPAMEAAEQLKAKGIKACVINARFVKPLDRNLILSAAGRSGCVVTVEENALQGGFG 569

Query: 655 SHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
           + +   ++ +G   +G+K + I +PD +IE  S  Q     GL    IA  A   L
Sbjct: 570 TAIMELLSDEG---AGIKVKRIGIPDRFIEQGSQAQLRKDLGLDAAGIAQVAEDFL 622


>gi|443309946|ref|ZP_21039621.1| 1-deoxy-D-xylulose-5-phosphate synthase [Synechocystis sp. PCC
           7509]
 gi|442779999|gb|ELR90217.1| 1-deoxy-D-xylulose-5-phosphate synthase [Synechocystis sp. PCC
           7509]
          Length = 635

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 255/644 (39%), Positives = 373/644 (57%), Gaps = 45/644 (6%)

Query: 85  VENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDK 144
           + +P +L  L+I++L+Q+A EIR +    V+ +   L   L  VELT+AL+       DK
Sbjct: 6   ITHPNQLHGLSIRQLQQIASEIREKHLQTVATSGGHLGPGLGVVELTLALYQTLDLDGDK 65

Query: 145 ILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGM 204
           ++WDVG Q Y HK++TGR     TLR+KDG++GY  R ES++D F AGH   S+SA LGM
Sbjct: 66  VIWDVGHQAYPHKLITGRYDRFDTLRQKDGVAGYLKRGESKFDHFGAGHASTSISAALGM 125

Query: 205 AVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPKIEES 263
           A+ARD KG++   V VI +G    G A EA+++AG+L  +N++V+LND+  S+ P     
Sbjct: 126 ALARDAKGEKFKTVAVIGDGALTGGMALEAINHAGHLPKTNLLVVLNDNEMSISP----- 180

Query: 264 PKTSINALSSTLSRIQSSKSFRQLREVAKGMTKR---IGRGMHEWAAKVDEYARGMIGPQ 320
              ++ A+S  L++++ S   + + +  K   K+   +G  +     ++ E  + +  P+
Sbjct: 181 ---NVGAISRHLNKMRLSPPVQFISDNIKEQVKQLPFVGDSLSPELGRLREGMKRLAVPK 237

Query: 321 GSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSEA 380
              +FEELG  Y+GPVDGHN+E+LI++ Q+       GPV+VHV T +        K  A
Sbjct: 238 VGAVFEELGFTYMGPVDGHNLEELIAIFQQAHQ--HTGPVIVHVSTVKG-------KGYA 288

Query: 381 IEKQQEGASDSNSLPFGNYSRT-----------YDDCFIEALVMEAEKDKDIVVVHAGME 429
           I +Q +    + S PF   S             Y   F  ALV  AE +  I+ + A M 
Sbjct: 289 IAEQDQVGYHAQS-PFNLTSGKANPSGKPKPPGYSKVFAHALVKLAENNPKIIGITAAMA 347

Query: 430 MDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDV 489
               L   Q K P +Y DVG+AEQHAVT +AG+AC G++P   I S FLQR YDQ+V+DV
Sbjct: 348 TGTGLDKLQAKLPNQYIDVGIAEQHAVTLAAGMACEGMRPVVAIYSTFLQRGYDQIVHDV 407

Query: 490 DQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASI 549
             Q LPV F +  AG+VG+DGPT  G +DI ++ CLPNM++MAP DE EL  M+ T    
Sbjct: 408 CIQNLPVFFCLDRAGIVGADGPTHQGMYDIAYLRCLPNMVLMAPKDEAELQQMIVTGVEH 467

Query: 550 DDRPVCFRYPRGAIVRTDL--PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARA 607
              P+  RYPRG      L   G+  +P  IGKG++L +G DV L+G+G+MV   ++   
Sbjct: 468 TSGPIAMRYPRGNGYGVPLMEEGWEALP--IGKGELLRQGDDVLLVGFGSMVYPAMQVAE 525

Query: 608 LLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-IGGFGSHVSHFIALDGL 666
           +LS+ GI+ TV +ARF KPLD  L+  L +    ++T+EEG  IGGFG+ V+     + L
Sbjct: 526 ILSEHGIEATVVNARFAKPLDTDLILPLAKQIGRVVTLEEGCLIGGFGTAVA-----EAL 580

Query: 667 LDSG--VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALS 708
           LD+   V  + + +PD  +EHA P +  A  GLT   +A   L+
Sbjct: 581 LDADIVVPVKRLGVPDILVEHAEPNESKAALGLTTPQMAEQILN 624


>gi|261380775|ref|ZP_05985348.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria subflava NJ9703]
 gi|284796238|gb|EFC51585.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria subflava NJ9703]
          Length = 629

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 264/649 (40%), Positives = 373/649 (57%), Gaps = 57/649 (8%)

Query: 78  PTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHV 137
           P+P+LD+++ P  L+ L  K+L Q+A E+R  L   V KT     S+L AVELTVALH+V
Sbjct: 3   PSPLLDIIDTPQDLRCLEKKQLPQVAAELREFLLDSVGKTGGHFASNLGAVELTVALHYV 62

Query: 138 FHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNS 197
           +  P D ++WDVG Q+Y HKILTGR++ +HT+R+  G++G+  RSESEYD F  GH   S
Sbjct: 63  YDTPEDHLVWDVGHQSYPHKILTGRKNQMHTMRQYGGLAGFPKRSESEYDAFGVGHSSTS 122

Query: 198 VSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLH 257
           + A LGMAVA    G     V +I +G   AGQA+EA++ AG +D +++VILND+  S+ 
Sbjct: 123 IGAALGMAVADKQLGNNRRSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVILNDNEMSIS 182

Query: 258 PKIEESPK-------TSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVD 310
           P +   PK         ++ L ST+ + QSSK   +L             G  E A KV+
Sbjct: 183 PNVGALPKYLASNVVRDMHGLLSTI-KAQSSKVLDKL------------PGAMELAQKVE 229

Query: 311 EYARGMIG-----PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVV 365
              + + G      Q  +LFE  G  Y GPVDGHN+E+L+ VL+++   G  GP L+HV+
Sbjct: 230 NKIKTLAGEAEHAKQSLSLFENFGFRYTGPVDGHNVENLVDVLKDLR--GRKGPQLLHVI 287

Query: 366 TEEN---RRAE-DTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDI 421
           T++    + AE D  K  A+ K           P      TY   F + L  +A  D+ +
Sbjct: 288 TKKGNGYKFAENDPVKYHAVSKLPSEVPAPEVKP-AAAKPTYTQVFGQWLCDQAAADERL 346

Query: 422 VVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRA 481
           V +   M     L  F+++FP+RYFDVG+AEQHAVTF+ GLAC G+KP   I S FLQRA
Sbjct: 347 VAITPAMREGSGLVEFEQRFPDRYFDVGIAEQHAVTFAGGLACEGIKPVVAIYSTFLQRA 406

Query: 482 YDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVD 541
           YDQ+V+DV  Q LPV F I  AG+VG+DGPT  G +D++F+ C+PNMI+ APSDE+E   
Sbjct: 407 YDQLVHDVALQNLPVLFAIDRAGIVGADGPTHAGLYDLSFLRCVPNMIIAAPSDENECRL 466

Query: 542 MVATVASIDDRPVCFRYPR----GAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGA 597
           +++T    +  P   RYPR    GA V   L       +EIGKG +  EG+ +A++ +G+
Sbjct: 467 LLSTCYQANS-PSAVRYPRGTGTGATVSDGLE-----TVEIGKGIIRREGEKIAIIAFGS 520

Query: 598 MVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-IGGFGSH 656
           MV   L A   L     + TVAD RF KP+D +L+  L ++H +++T EE +  GG GS 
Sbjct: 521 MVAPSLTAADKL-----NATVADMRFVKPIDEELIVRLARSHDYIVTAEENAEQGGAGSA 575

Query: 657 VSHFIALDGLLDSGVKWRPIVL---PDNYIEHASPTQQLALAGLTGHHI 702
           V   +A  G+       +P++L    D   EH  P + L   GL+   I
Sbjct: 576 VLEVLAKHGIC------KPVLLLGVEDKVTEHGDPKKLLDDLGLSAEAI 618


>gi|385330321|ref|YP_005884272.1| 1-deoxy-D-xylulose-5-phosphate synthase [Marinobacter adhaerens
           HP15]
 gi|311693471|gb|ADP96344.1| 1-deoxy-D-xylulose-5-phosphate synthase [Marinobacter adhaerens
           HP15]
          Length = 643

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 259/632 (40%), Positives = 376/632 (59%), Gaps = 43/632 (6%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD ++ P +L+ L  ++L +LA E+R+ L   V +T     + L  +ELTVALH+VF
Sbjct: 17  TPLLDRIDEPAQLRELAPEQLTRLARELRAFLLWSVGQTGGHFGAGLGVLELTVALHYVF 76

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGR+  + ++R+K G++G+  R+ESEYD F  GH   S+
Sbjct: 77  DTPSDRLVWDVGHQAYPHKILTGRKESMGSIRRKGGLAGFPKRAESEYDTFGVGHSSTSI 136

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LGMA+A  ++      + VI +G   AG A+EA+++AG+L ++M+VILND+  S+  
Sbjct: 137 SAALGMAIAARLQQTGRKSIAVIGDGAMTAGMAFEALNHAGHLHADMLVILNDNDMSI-- 194

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                   ++  LS+  +++ SS+++ Q+R+ +K + +     M   A K +E+ +GMI 
Sbjct: 195 ------SRNVGGLSNYFAKLLSSRTYNQVRDSSKKVLQGAPHLM-ALAKKTEEHFKGMIA 247

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR----RAED 374
           P   TLFEELG  YIGP+DGH++  L+  L+ +  L   GP  +HVVT + +       D
Sbjct: 248 P--GTLFEELGFNYIGPIDGHDLPLLVETLENIREL--EGPQFLHVVTTKGKGFAPAEAD 303

Query: 375 TQKSEAIEK-QQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
                AI K +    S    +        Y + F + L   AE+D+ +V +   M     
Sbjct: 304 PIGYHAINKIEPVPPSKPEPVKPKPKKPKYANVFGQWLCDSAEQDERVVGITPAMCEGSD 363

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L  F ++FPERYFDV +AEQHAVT +AGLAC G KP   I S FLQRAYDQ+++DV  Q 
Sbjct: 364 LLAFSQRFPERYFDVAIAEQHAVTLAAGLACDGAKPVVAIYSTFLQRAYDQLIHDVAIQN 423

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           L V F I  AGLVG DGPT  GAFDI+++ C+PNM+VM PSDE+E   M+ T   + + P
Sbjct: 424 LDVLFAIDRAGLVGEDGPTHAGAFDISYLRCVPNMVVMTPSDENETRQMLQT-GMLYEGP 482

Query: 554 VCFRYPR----GAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALL 609
              RYPR    GA ++ +L      P+EIGKG+ +  GK VA+L +G ++   L+A    
Sbjct: 483 ASVRYPRGTGPGAEIQQEL-----TPLEIGKGRRIRNGKGVAILNFGTLLAPALEAAEA- 536

Query: 610 SKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLD 668
               I  TVAD RF KPLD +LV EL + H  L+T+EE +I GG GS V+ F      L+
Sbjct: 537 ----IGATVADMRFVKPLDEELVLELAEQHELLVTLEENAIAGGAGSAVTEF------LN 586

Query: 669 SGVKWRPIV---LPDNYIEHASPTQQLALAGL 697
           S +   P++   LPD +++H    + LA  GL
Sbjct: 587 SRLVTMPVLQLGLPDTFMDHGKHGELLAECGL 618


>gi|435853310|ref|YP_007314629.1| 1-deoxy-D-xylulose-5-phosphate synthase [Halobacteroides halobius
           DSM 5150]
 gi|433669721|gb|AGB40536.1| 1-deoxy-D-xylulose-5-phosphate synthase [Halobacteroides halobius
           DSM 5150]
          Length = 622

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 254/633 (40%), Positives = 373/633 (58%), Gaps = 46/633 (7%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L  + +P  LK+L+ +EL  LA EIR E+   +S+T   L SSL AVE+T+ALH     
Sbjct: 4   LLSKINSPQDLKALSYEELYSLAEEIRDEIIITLSETGGHLASSLGAVEITLALHSALDT 63

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P DKI+WDVG Q+YAHK++TGR+    TLR+  G+SG+  RSESEYD  + GH   S+SA
Sbjct: 64  PQDKIIWDVGHQSYAHKLITGRQEEFSTLRQYGGLSGFPKRSESEYDHLDVGHSSTSISA 123

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKI 260
            LGMA A D++ K E +++VI +G    G A+EA+++AG+L+ ++IV+LND+  S+    
Sbjct: 124 ALGMAAACDLENKEETVLSVIGDGALTGGIAFEALNHAGHLNKDLIVLLNDNEMSI---- 179

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRI---GRGMHEWAAKVDEYARGMI 317
                 ++ A+S+ L +++ +    + +E  + +  +I   G  + + A K  +  + ++
Sbjct: 180 ----SKNVGAVSNYLDKLRVNPQLHRAKEEVENIINKIPALGNKVLKTAGKFKDAIKYLV 235

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQK 377
                 LFE+LG  Y+GP+DGHNI+ L   ++    +G  GPVL+H V         TQK
Sbjct: 236 --VSGILFEKLGFTYLGPIDGHNIKVLKEHIKNAEEIG--GPVLIHAV---------TQK 282

Query: 378 SEAIEKQQEGASDSNSL-PF----GNYSR-----TYDDCFIEALVMEAEKDKDIVVVHAG 427
            +     +   +D + + PF    G   R     TY   + ++L+  A+ D++IV + A 
Sbjct: 283 GKGYPPAENTPADYHGVGPFNVRTGKAKRKKKQLTYTQAYTQSLIDLAKADEEIVAITAA 342

Query: 428 MEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVN 487
           M        F+ +FP+R++DVG+AEQHAVTF AGLA  G KPF  I S FLQRAYDQ+ +
Sbjct: 343 MPKGTG--DFENQFPDRFYDVGIAEQHAVTFGAGLALEGAKPFITIYSTFLQRAYDQIFH 400

Query: 488 DVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVA 547
           D+  Q+ PV+  +   GLVG DG T  G FD  ++  LPN+ VMAP DE EL  MV T A
Sbjct: 401 DLCLQQAPVKLALDRGGLVGKDGETHHGVFDFAYLRHLPNITVMAPKDEMELQSMVKTAA 460

Query: 548 SIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARA 607
             +  P+ FRYPRG      L   +   +EIGKG++L EGKD A+L  G+MV   L+A  
Sbjct: 461 EYEAGPIAFRYPRGKGRGVKLKNPK--SLEIGKGEILREGKDAAILAIGSMVYPALEAAE 518

Query: 608 LLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGL 666
            L++ GID+TV ++RF KPLD +L+  L Q    + T+EE  + GGFGS V+       L
Sbjct: 519 ELTRAGIDLTVVNSRFVKPLDQELILNLAQQFDTIFTIEEHVLQGGFGSAVTEL-----L 573

Query: 667 LDSGVKW--RPIVLPDNYIEHASPTQQLALAGL 697
           +D+ +K     I LPD +IEH +  +  A  GL
Sbjct: 574 IDNNLKLDVARIGLPDKFIEHGTQQELKAKYGL 606


>gi|239814578|ref|YP_002943488.1| 1-deoxy-D-xylulose-5-phosphate synthase [Variovorax paradoxus S110]
 gi|239801155|gb|ACS18222.1| deoxyxylulose-5-phosphate synthase [Variovorax paradoxus S110]
          Length = 632

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 256/638 (40%), Positives = 375/638 (58%), Gaps = 34/638 (5%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L  + +P  ++     +LKQLA E+R+ +   VS+T   L S+L  VELTVALHHVF+ 
Sbjct: 18  LLPTLHDPSPIRQFDRAQLKQLAAEVRACVLDNVSRTGGHLSSNLGTVELTVALHHVFNT 77

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+++WDVG QTY HKILTGRR  + TLR+  GISG+  RSESEYD F   H   S+SA
Sbjct: 78  PHDRLVWDVGHQTYPHKILTGRRERMPTLRQIGGISGFPQRSESEYDTFGTAHSSTSISA 137

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKI 260
            LGMA+A   KG+    V +I +G   AG A+EA++NAG  D  ++VILND+  S+ P  
Sbjct: 138 ALGMAMAAKQKGEDRHSVAIIGDGALTAGMAFEALNNAGVCDCKLLVILNDNDMSISP-- 195

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQ 320
                  + AL+  L+++ S   +   + V K +  R    + E A + +++A+GM+ P 
Sbjct: 196 ------PVGALNRYLAQLMSGNFYAAAKNVGKSVL-RAAPPLFELAKRFEQHAKGMVVP- 247

Query: 321 GSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSEA 380
            +TLFE+ G  Y+GP+DGH+++ L+  L+ +  L   GP  +HVVT++  +     +++ 
Sbjct: 248 -ATLFEQFGFNYVGPIDGHDLDSLVPTLENLKHLD--GPQFLHVVTKKG-QGYKLAEADP 303

Query: 381 IEKQQEGASDSN---SLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLF 437
           +     G  D       P     +T+   F + L   A  D  +V +   M     L  F
Sbjct: 304 VAYHGPGKFDPQVGLVKPTAVAKQTFTQVFGQWLCDMAAHDGRLVGITPAMREGSGLVEF 363

Query: 438 QEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVR 497
           +++FP+RY+DVG+AEQHAVTF+AGLAC GLKP   I S FLQRAYDQ+++DV  Q LPV 
Sbjct: 364 EQRFPDRYYDVGIAEQHAVTFAAGLACEGLKPVVAIYSTFLQRAYDQLIHDVAIQNLPVV 423

Query: 498 FVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFR 557
           F +  AGLVG+DG T  GA+DI F+ C+PNM +  P+DE E   ++++ A   + PV  R
Sbjct: 424 FALDRAGLVGADGATHAGAYDIPFLRCIPNMSIACPADERECRQLLSS-AYEQNHPVAVR 482

Query: 558 YPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVT 617
           YPRGA     +P      +  GKG+V  EGK +A+L +G ++   L A   L     D T
Sbjct: 483 YPRGAGAGV-VPHLALDALPFGKGEVRREGKRIAILVFGTLLYPALTAAESL-----DAT 536

Query: 618 VADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVKWRPI 676
           V + R+ KPLD++L+ ++   H  ++T+EEG++ GG GS V     L+ L  + V+ +P+
Sbjct: 537 VVNMRWAKPLDVELLLKVAGTHEAIVTLEEGAVMGGAGSAV-----LEALQAANVQ-KPV 590

Query: 677 V---LPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
           +   LPD +IEH  P + LA  GL    IAA+     G
Sbjct: 591 LQLGLPDRFIEHGDPGKLLASIGLDAAGIAASITQRFG 628


>gi|282896745|ref|ZP_06304753.1| Deoxyxylulose-5-phosphate synthase [Raphidiopsis brookii D9]
 gi|281198463|gb|EFA73351.1| Deoxyxylulose-5-phosphate synthase [Raphidiopsis brookii D9]
          Length = 630

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 248/632 (39%), Positives = 365/632 (57%), Gaps = 29/632 (4%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L  + +P +L  L+I++L+++A +IR +    V+ +   L   L  VELT+ L+     
Sbjct: 2   LLSEITHPNQLHGLSIRQLQEIAKQIRDKHLQTVAASGGHLGPGLGVVELTLGLYQTLDL 61

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
             DK++WDVG Q Y HK++TGR    HTLR+KDG++GY  R ES++D F AGH   S+SA
Sbjct: 62  DRDKVIWDVGHQAYPHKLITGRYHDFHTLRQKDGVAGYLKRCESQFDHFGAGHASTSISA 121

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPK 259
            LGMA+ARD+KG++  +  VI +G    G A EA+++AG+L  +N++V+LND+  S+ P 
Sbjct: 122 ALGMALARDMKGEKFKVAAVIGDGALTGGMALEAINHAGHLPKTNLLVVLNDNEMSISPN 181

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREV--AKGMTKRIGRGMHEWAAKVDEYARGMI 317
           +   P+       S   +  +     QL+ +       +R+  GM   A           
Sbjct: 182 VGAIPRYLNKMRLSPPVQFIADNIEEQLKHIPFVGDELERVTEGMKRLAMS--------- 232

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQK 377
             +   +FEELG  Y+GPVDGHN+E+LI+  Q+   +   GPVLVHV T + +  E  +K
Sbjct: 233 --KLGAVFEELGFTYMGPVDGHNLEELITTFQQAHQI--FGPVLVHVATVKGKGYEVAEK 288

Query: 378 SEAIEKQQE--GASDSNSLPFGNYSR--TYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
            +     Q     +   ++P  N  +   Y   F   LV  AE++  IV + A M     
Sbjct: 289 DQVGYHAQNPFNLATGKAIP-SNKPKPPAYSKVFSHTLVKLAEQNPKIVGITAAMATGTG 347

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L   Q K P +Y DVG+AEQHAVT +AGLAC G++P   I S FLQRAYDQ+++DV  Q 
Sbjct: 348 LDKLQAKLPHQYIDVGIAEQHAVTLAAGLACEGMRPVAAIYSTFLQRAYDQIIHDVCIQN 407

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPV F +  AG+VG+DGPT  G +DI ++ C+PNM++MAP DE EL  MV T       P
Sbjct: 408 LPVFFCLDRAGIVGADGPTHQGMYDIAYLRCIPNMVLMAPKDEAELQRMVVTGVEYTGGP 467

Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
           +  R+PRG      L      P+EIGKG++L +G D+ ++GYG MV + ++   +LS+ G
Sbjct: 468 IAMRFPRGNGYGVPLMEEGWEPLEIGKGEILRQGDDLLIVGYGTMVNSGMQVAQILSEHG 527

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGV- 671
           I+ TV +ARF KPLDI L+  L +    ++T+EEG + GGFGS V+     + LLD+ V 
Sbjct: 528 IEATVINARFVKPLDIDLIIPLAEKIGRVVTLEEGCLMGGFGSAVA-----EALLDANVV 582

Query: 672 -KWRPIVLPDNYIEHASPTQQLALAGLTGHHI 702
              + I +PD  ++HA+P +     GLT   I
Sbjct: 583 IPVKRIGIPDELVDHATPEESKVGLGLTSEQI 614


>gi|416051603|ref|ZP_11577651.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           actinomycetemcomitans serotype e str. SC1083]
 gi|347993036|gb|EGY34413.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           actinomycetemcomitans serotype e str. SC1083]
          Length = 617

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 252/635 (39%), Positives = 370/635 (58%), Gaps = 25/635 (3%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+L L+ +P  L+ L  ++L Q+  E+R  L   VS++   L S L  VELTVALH+VF 
Sbjct: 5   PLLSLINSPEDLRLLNKEQLPQVCQELREYLLESVSQSSGHLASGLGTVELTVALHYVFK 64

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG Q Y HKILTGRR  + T+R+K G+  +  R ESE+D  + GH   S+S
Sbjct: 65  TPFDQLIWDVGHQAYPHKILTGRRDQMPTIRQKGGLHPFPWRGESEFDVLSVGHSSTSIS 124

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           AGLG+A+A + +      V VI +G   AG A+EA+++AG L ++M+VILND+  S+   
Sbjct: 125 AGLGIAIAAERENAGRKTVCVIGDGAITAGMAFEALNHAGSLHTDMLVILNDNEMSI--- 181

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                  ++ AL++ L+R+ S   +  +RE  K +   +   + E+  K +E+ +G + P
Sbjct: 182 -----SENVGALNNHLARLLSGSFYSSIREGGKKILSGV-PPIKEFVKKTEEHVKGFVSP 235

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
            GST+FEELG  YIGP+DGHN+E+LIS LQ ++SL   GP  +H+VT++ +     +K  
Sbjct: 236 -GSTMFEELGFNYIGPIDGHNVEELISTLQNMSSL--KGPQFLHIVTKKGKGYTPAEKDP 292

Query: 380 -AIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQ 438
                  +    S  LP  N + TY   F + L   AE+D  ++ +   M     +  F 
Sbjct: 293 IGFHGVPKFNHLSGELPKFNATPTYSKIFGDWLCEMAEQDPKLIGITPAMREGSGMVEFS 352

Query: 439 EKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRF 498
           ++FP++YFDV +AEQHAVTF+AGLA GG KP   I S FLQRAYDQ+++DV  Q LPV F
Sbjct: 353 QRFPQQYFDVAIAEQHAVTFAAGLAIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPVLF 412

Query: 499 VITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRY 558
            I  AG+VG+DG T  GAFDI+FM C+PN+++M PS+E+E   M+ T      +P   RY
Sbjct: 413 AIDRAGIVGADGQTHQGAFDISFMRCIPNIVIMTPSNENECRQMLYTSYHC-GKPAAVRY 471

Query: 559 PRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTV 618
           PRG  V   +       +E+GK K++ EGK +A+L +G ++ N L+    L     + TV
Sbjct: 472 PRGNAV--GVELEPLQLLELGKSKLIREGKKIAILNFGTLLPNALQVAEKL-----NATV 524

Query: 619 ADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVKWRPIV 677
            D RF KPLD   + E+ + H  ++T+EE +I GG GS V+  +         VK   + 
Sbjct: 525 IDMRFVKPLDTARINEIAKTHELIVTLEENAIQGGAGSAVAEVLYHQ---QHQVKLLQLG 581

Query: 678 LPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
           LPD +I   + ++ L    L    I    L  LG 
Sbjct: 582 LPDFFIPQGTQSEMLTGLKLDAAGIEWQILDFLGE 616


>gi|421566212|ref|ZP_16011968.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
           NM3081]
 gi|402340821|gb|EJU76012.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
           NM3081]
          Length = 637

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 262/645 (40%), Positives = 378/645 (58%), Gaps = 45/645 (6%)

Query: 78  PTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHV 137
           P+P+LDL+++P  L+ L  K+L +LA E+R+ L   V +T     S+L AVELT+ALH+V
Sbjct: 3   PSPLLDLIDSPQDLRRLDKKQLPRLAGELRAFLLESVGQTGGHFASNLGAVELTIALHYV 62

Query: 138 FHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNS 197
           +  P DK++WDVG Q+Y HKILTGR++ +HT+R+  G++G+  RSESEYD F  GH   S
Sbjct: 63  YDTPEDKLVWDVGHQSYPHKILTGRKNQMHTMRQYGGLAGFPKRSESEYDAFGVGHSSTS 122

Query: 198 VSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLH 257
           + A LGMA A  + G     V +I +G   AGQA+EA++ AG +D +++V+LND+  S+ 
Sbjct: 123 IGAALGMAAADKLLGSDRRSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDNEMSIS 182

Query: 258 PKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGR---GMHEWAAKVDEYAR 314
           P +   PK     L+S + R         L    K  T ++     G  E+A KV+   +
Sbjct: 183 PNVGALPKY----LASNVVR-----DMHGLLSTVKAQTGKVLDKIPGAMEFAQKVEHKIK 233

Query: 315 GMI-----GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN 369
            +        Q  +LFE  G  Y GPVDGHN+E+L+ VL+++ S    GP L+HV+T++ 
Sbjct: 234 TLAEEAEHAKQSLSLFENFGFRYTGPVDGHNVENLVDVLKDLRS--RKGPQLLHVITKKG 291

Query: 370 ---RRAE-DTQKSEAIEK-QQEGASD--SNSLPFGNYSRTYDDCFIEALVMEAEKDKDIV 422
              + AE D  K  A+ K  +EGA+   S   P      TY   F + L   A  D  +V
Sbjct: 292 NGYKLAENDPVKYHAVAKLPKEGAAQMPSEKEPKPTAKPTYTQVFGKWLCDRAAADSRLV 351

Query: 423 VVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAY 482
            +   M     L  F+++FP+RYFDVG+AEQHAVTF+ GLAC G+KP   I S FLQRAY
Sbjct: 352 AITPAMREGSGLVEFEQRFPDRYFDVGIAEQHAVTFAGGLACEGMKPVVAIYSTFLQRAY 411

Query: 483 DQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDM 542
           DQ+V+D+  Q LPV F +  AG+VG+DGPT  G +D++F+ C+PNMIV APSDE+E   +
Sbjct: 412 DQLVHDIALQNLPVLFAVDRAGIVGADGPTHAGLYDLSFLRCIPNMIVAAPSDENECRLL 471

Query: 543 VATVASIDDRPVCFRYPRGAIVRTDLPGYRGI-PIEIGKGKVLVEGKDVALLGYGAMVQN 601
           ++T     D P   RYPRG    T +P   G+  +EIGKG +  EG+  A + +G+MV  
Sbjct: 472 LSTCYQA-DAPAAVRYPRG--TGTGVPVSDGMETVEIGKGIIRREGEKTAFIAFGSMVAP 528

Query: 602 CLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-IGGFGSHVSHF 660
            L   A+  KL  + TVAD RF KP+D +L+  L ++H  ++T+EE +  GG GS V   
Sbjct: 529 AL---AVAGKL--NATVADMRFVKPIDEELIVRLARSHDRIVTLEENAEQGGAGSAVLEV 583

Query: 661 IALDGLLDSGVKWRPIVL---PDNYIEHASPTQQLALAGLTGHHI 702
           +A  G+       +P++L    D    H  P + L   GL+   +
Sbjct: 584 LAKHGIC------KPVLLLGVADTVTGHGDPKKLLDDLGLSAEAV 622


>gi|37527746|ref|NP_931091.1| 1-deoxy-D-xylulose-5-phosphate synthase [Photorhabdus luminescens
           subsp. laumondii TTO1]
 gi|41016942|sp|Q7N0J7.1|DXS_PHOLL RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|36787182|emb|CAE16259.1| 1-deoxy-D-xylulose 5-phosphate synthase
           (1-deoxyxylulose-5-phosphate synthase) (DXP synthase)
           (DXPS) [Photorhabdus luminescens subsp. laumondii TTO1]
          Length = 621

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 254/624 (40%), Positives = 364/624 (58%), Gaps = 32/624 (5%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P L L ENP  L+ L  + L +L  E+R  L + VS++     S L  VELTVALH+V+ 
Sbjct: 9   PTLALAENPEELRMLPKESLPKLCDELRQFLLNSVSRSSGHFASGLGTVELTVALHYVYK 68

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P DK++WDVG Q Y HKILTGRR  I T+R+K+G+  +  R ESEYD    GH   S+S
Sbjct: 69  TPFDKLVWDVGHQAYPHKILTGRRDRIDTIRQKNGLHPFPWRDESEYDTLCVGHSSTSIS 128

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           AGLGMA+A   +GK    V VI +G   AG A+EAM++AG +D +++VILND+  S+   
Sbjct: 129 AGLGMAIAAQREGKGRRTVCVIGDGAITAGMAFEAMNHAGDIDPDILVILNDNEMSI--- 185

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                  ++ AL++ L+++ S K +  LRE  K +   +   + E   K +E+ +GM+ P
Sbjct: 186 -----SENVGALNNHLAQLLSGKLYTTLREGGKKVFSNL-PPIKELLKKTEEHIKGMVVP 239

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS- 378
              TLFEELG  YIGP+DGH++  L   L+ +  L   GP L+H++T++ R     +K  
Sbjct: 240 --GTLFEELGFNYIGPIDGHDVLTLTQTLKNMREL--KGPQLLHIMTKKGRGYAPAEKDP 295

Query: 379 ---EAIEKQQEGASDSNSLPFGNYSR-TYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
               A+ K       + +LP  + +R T+   F + L  EA  DK ++ +   M     +
Sbjct: 296 ISWHAVPKFD---PTTGALPKSSDNRPTFSKIFGDWLCEEAANDKKLMAITPAMREGSGM 352

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F  ++P++YFDV +AEQHAVTF+AGLA GG +P   I S FLQRAYDQV++D+  Q L
Sbjct: 353 VRFSREYPDQYFDVAIAEQHAVTFAAGLAIGGYRPIVAIYSTFLQRAYDQVIHDIAIQNL 412

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PV F I   G+VG+DG T  GAFD++F+ C+PNM++MAPSDE+E   M+ T       PV
Sbjct: 413 PVLFAIDRGGIVGADGQTHQGAFDLSFLRCIPNMVIMAPSDENECRQMLHTGYHYQQGPV 472

Query: 555 CFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGI 614
             RYPRG     +   +  +P  IGKG +  +G  VA+L +G ++ + + A   L     
Sbjct: 473 AVRYPRGTGTGAEPQPFEQLP--IGKGVIRRQGNKVAILNFGTLLPDAITAAESL----- 525

Query: 615 DVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVKW 673
           D TV D RF KPLD +L+ ++  NH  L+T+EE +I GG GS V+  +   G L   V+ 
Sbjct: 526 DATVVDMRFVKPLDKELILDMADNHDLLVTLEENAIMGGAGSGVNELLMQKGRL---VQI 582

Query: 674 RPIVLPDNYIEHASPTQQLALAGL 697
             I LPD ++   S  +  A  GL
Sbjct: 583 LNIGLPDQFVPQGSQEEIKADLGL 606


>gi|189425294|ref|YP_001952471.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter lovleyi SZ]
 gi|189421553|gb|ACD95951.1| deoxyxylulose-5-phosphate synthase [Geobacter lovleyi SZ]
          Length = 622

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 260/647 (40%), Positives = 372/647 (57%), Gaps = 45/647 (6%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L+ ++NP  LK LT ++L  LA EIRS L S VS+T   L S+L AVEL++ALH+ F  
Sbjct: 2   LLETIQNPADLKKLTPEQLPDLAEEIRSFLLSTVSETGGHLGSNLGAVELSLALHYCFST 61

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P DKI+WDVG Q Y HK+LTGRR    T R+  GISG+  R ESE+D F  GH   S+SA
Sbjct: 62  PQDKIVWDVGHQAYTHKLLTGRRDRFATQRQYKGISGFPKRCESEHDAFGVGHASTSISA 121

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKI 260
            LGMAVA ++  K+  ++ VI +G+   G A+E ++ AG+L  N+IV+LND+  S+    
Sbjct: 122 ALGMAVADNLDQKKNNVIAVIGDGSLTGGIAFEGLNQAGHLKKNLIVVLNDNEMSI---- 177

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRI---GRGMHEWAAKVDEYARGMI 317
                 ++ A S+ +SR  +++ FR+L++  K +   I   G+ + ++A + +   +G +
Sbjct: 178 ----SKNVGAFSAFVSRKMTTRHFRELKKEMKELLTSIPAFGKDILKFARRAENSLKGFL 233

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN---RRAED 374
            P    LFE LG  YIGP+DGH++  LI V          GP+L+HV+T +    R AE+
Sbjct: 234 TP--GALFEALGFDYIGPIDGHDLPGLIEVFNNAREFD--GPLLLHVMTTKGKGYRPAEE 289

Query: 375 T-QKSEAIEKQQEGASD--SNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMD 431
           T  K   +     GA D  +   P  + + +Y + F   LV  A++D  +V + A M   
Sbjct: 290 TPDKFHGV-----GAFDLSTGKAPAKSSTISYTEVFGRTLVDLAKEDPKVVAITAAMPDG 344

Query: 432 LSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQ 491
             L  F +  P+R+FDVG+AEQH + F+AGLA  G KP   I S+F+QRAYDQV +DV  
Sbjct: 345 TGLNFFSDALPDRFFDVGIAEQHGICFAAGLAADGFKPVAAIYSSFMQRAYDQVFHDVCL 404

Query: 492 QRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDD 551
           Q LPV   +  AGLVG DGPT  G FD++FM  LP +  MAP DE+EL  M+ T   +  
Sbjct: 405 QNLPVVIAMDRAGLVGDDGPTHHGVFDLSFMRHLPGLTFMAPKDENELRHMLKTALEL-K 463

Query: 552 RPVCFRYPRGAIVRTDLPGYRGIPIE-------IGKGKVLVEGKDVALLGYGAMVQNCLK 604
            PV  RYPRGA       GY G+P++       IGKG++L EG D+ ++  G+ V   +K
Sbjct: 464 APVALRYPRGA-------GY-GVPLDKKMECLPIGKGELLREGTDLTIVAIGSTVMPAVK 515

Query: 605 ARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIAL 663
           A   L++ GI   V +ARF KPLD  L+    +    ++TVEE  + GGFGS V   +  
Sbjct: 516 AAEQLAEQGISAGVVNARFIKPLDADLILGQARATGRIVTVEENVLQGGFGSAVLELLQD 575

Query: 664 DGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
           + +  S VK + + +PD YIE  +  Q     G+    IAA   + L
Sbjct: 576 NAM--SQVKVKRLGIPDQYIEQGTQAQLRKDVGIDADGIAAAVQAFL 620


>gi|384085057|ref|ZP_09996232.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidithiobacillus
           thiooxidans ATCC 19377]
          Length = 624

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 260/637 (40%), Positives = 362/637 (56%), Gaps = 29/637 (4%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           T +L  +  P  L+ ++  ELK +A  +R  L   VS+T   L S L  VEL VALH VF
Sbjct: 2   TDLLKGIPMPEELRRMSRTELKGVAKTLRQFLLETVSQTGGHLSSCLGTVELAVALHTVF 61

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+++WDVG Q Y HKILTGR      LR KDG+SG+  R ES YD F AGH   S+
Sbjct: 62  NTPDDRLVWDVGHQAYPHKILTGRGPRFGQLRMKDGLSGFLKRDESPYDSFGAGHSSTSI 121

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SAGLGMAVA  +K     +V +I +G   AG AYEA++N G LD+N++V+LND+  S+ P
Sbjct: 122 SAGLGMAVAAKLKKNDREVVAIIGDGAMTAGMAYEALNNGGVLDANLLVVLNDNEMSISP 181

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                   ++ A+S  L+RI S + +  +R+ A G    +   + E A K +E  +G++ 
Sbjct: 182 --------NVGAVSQYLTRILSGRLYNTVRDGA-GQALSLVPPLRELAKKAEEGVKGLVT 232

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR----RAED 374
           P   TLFEE+G  Y GP+DGH+++ LI  L+ +  +   GP L+HV+T++ +      ED
Sbjct: 233 P--GTLFEEMGFNYFGPIDGHDLDALIPTLENLKKI--KGPRLLHVMTKKGKGYGPAEED 288

Query: 375 TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
                 +    +  SD           +Y   F + L  +   +  +V +   M     L
Sbjct: 289 PCGYHGVTPFNQ--SDGQMAKKAGGPPSYTKVFGDWLCDKGAAESSLVAITPAMREGSGL 346

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F++ +PERY+DVG+AEQHAVTF+AG+AC G+ P   I S FLQRAYDQ+++DV  Q L
Sbjct: 347 VRFEQLYPERYYDVGIAEQHAVTFAAGMACDGIHPVVAIYSTFLQRAYDQLLHDVAIQNL 406

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PV F I  AGLVG+DG T  GAFD+ +  C+PN++VMAP DE EL DM+ T  +    P 
Sbjct: 407 PVLFAIDRAGLVGADGATHQGAFDMAYARCIPNLVVMAPKDEQELRDMLNTGFAYPG-PA 465

Query: 555 CFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGI 614
             RYPRG  V  +L       + +GK +V+  G  +A+L +G      L+A   L     
Sbjct: 466 LVRYPRGTGVGLELDKNLERTVALGKAEVIRSGNKLAILAFGTRAAAALQAGEAL----- 520

Query: 615 DVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVKW 673
           D TV + RF KPLD +L++EL Q H  L+TVEEG I GG GS V+ ++   G +   V  
Sbjct: 521 DATVINMRFVKPLDQELLQELTQTHQALLTVEEGVIAGGAGSAVAEYLLNQGQI---VPM 577

Query: 674 RPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
           R + LPD +IE     Q LA  GL    I A   +LL
Sbjct: 578 RILGLPDQFIEQGDANQWLAELGLDASGITAAGRTLL 614


>gi|167037516|ref|YP_001665094.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|320115930|ref|YP_004186089.1| deoxyxylulose-5-phosphate synthase [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
 gi|166856350|gb|ABY94758.1| deoxyxylulose-5-phosphate synthase [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|319929021|gb|ADV79706.1| deoxyxylulose-5-phosphate synthase [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
          Length = 620

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 248/643 (38%), Positives = 378/643 (58%), Gaps = 32/643 (4%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L+ +++P  LK L  K+   +  EIR  L   VSKT   L S+L  VELT+ALH+VF++
Sbjct: 1   MLEQIDSPYDLKKLDKKDFPLICEEIRQFLIEKVSKTGGHLASNLGIVELTIALHYVFNS 60

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           PVDKI+WDVG Q Y HK+LTGR+    TLRK +G+SGYT R+ES +D F AGH   S+SA
Sbjct: 61  PVDKIIWDVGHQCYVHKMLTGRKDQFDTLRKFNGLSGYTKRTESVHDIFGAGHSSTSISA 120

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKI 260
            LG+A ARD+KG++  +V VI +G    G A+EA++NAG   +++IV+LN +  S+    
Sbjct: 121 ALGIAKARDLKGEKYSVVAVIGDGALTGGMAFEALNNAGRSKTDLIVVLNHNEMSI---- 176

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTK---RIGRGMHEWAAKVDEYARGMI 317
                 ++ +LS  LS++++  ++ +L++    +      IG+ +H++  ++ +  + ++
Sbjct: 177 ----SENVGSLSLYLSKLRTDPTYNKLKQEVDNLLNIVPPIGKSLHKYIERIKDSVKQLV 232

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQK 377
            P     FEE+G  Y+GP+DGH++  LI VL+    +   GP+LVHV+T++ +  +  +K
Sbjct: 233 VP--GMFFEEMGFTYLGPIDGHDVGSLIEVLERAKKI--KGPILVHVITKKGKGYKFAEK 288

Query: 378 SEAIEKQQEGAS-DSNSLPFGNYSR-TYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQ 435
               +K    A  D  +  F N  + TY D F + L   A +D  IV + A M     L 
Sbjct: 289 FP--DKFHSAAPFDIQTGKFVNEGQATYSDVFGKTLTEMALQDDKIVAITAAMPEGTGLI 346

Query: 436 LFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLP 495
            F +  PER+FDVG+AEQHA TF+AG+A  G KP+  + S FLQRAYDQ+++DV  Q+LP
Sbjct: 347 HFAKLIPERFFDVGIAEQHATTFAAGMAVQGYKPYFAVYSTFLQRAYDQLIHDVCIQKLP 406

Query: 496 VRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVC 555
           V F I  AG+VG DG T  G FD++++  +PN+ +M+P D +ELV+MV    ++ + PV 
Sbjct: 407 VVFAIDRAGIVGEDGETHQGVFDLSYLRPIPNITIMSPKDANELVEMVKLSRNL-EFPVA 465

Query: 556 FRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGID 615
            RYPRG     D+   R   IE GK +++ EGK++A+   G MV   L+A+ +L    + 
Sbjct: 466 IRYPRGKAGEFDIT--RECSIEFGKAELVTEGKEIAIFALGRMVGKVLEAKEILKVSDLQ 523

Query: 616 VTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVKWR 674
             + + RF KPLD +L+ ++     F++TVE+  I GG GS      A+  LL+S   ++
Sbjct: 524 PFIVNLRFVKPLDEELILDISNKVKFIVTVEDNVIAGGVGS------AILELLNSNGIYK 577

Query: 675 PIV---LPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTR 714
           P++    PD +IEH           L    IA T L      R
Sbjct: 578 PVLRLGFPDKFIEHGDVENLFKKYNLDAESIANTILQKYKEMR 620


>gi|417958051|ref|ZP_12600968.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria weaveri ATCC
           51223]
 gi|343967443|gb|EGV35688.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria weaveri ATCC
           51223]
          Length = 625

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 262/642 (40%), Positives = 377/642 (58%), Gaps = 56/642 (8%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD ++ P  L+ L  K+L Q+A E+RS L   V +T     S+L AVELTVALH+V+
Sbjct: 4   TPLLDTIDLPEDLRLLDKKQLPQVAAELRSFLLDSVGQTGGHFASNLGAVELTVALHYVY 63

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P DK++WDVG Q+Y HKILTGR++ + T+R+  G++G+  RSES+YD F  GH   S+
Sbjct: 64  NTPDDKLVWDVGHQSYPHKILTGRKNRMRTMRQYGGLAGFPKRSESDYDAFGVGHSSTSI 123

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLH 257
            A LGMAVA  + G     V +I +G   AGQA+EA++ AG + D N++VILND+  S+ 
Sbjct: 124 GAALGMAVADKLNGSPNRSVAIIGDGAMTAGQAFEALNCAGDMEDVNLLVILNDNEMSIS 183

Query: 258 PKIEESPK-------TSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVD 310
           P +   PK         ++ L ST+ + QS+K   +L             G  E A KV+
Sbjct: 184 PNVGALPKYLARNVVRDMHGLLSTI-KAQSTKVLDKL------------PGALEIAQKVE 230

Query: 311 EYARGMIG-----PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVV 365
              + + G      Q  +LFE  G  Y GPVDGH++E+L+ VL+++ +    GP ++HV+
Sbjct: 231 HKIKTIAGEAEHAKQSLSLFENFGFQYTGPVDGHDVENLVDVLKDLRA--KKGPQILHVI 288

Query: 366 TEENR----RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDI 421
           T++ +       D  K  AI K     S+  ++P      TY   F + L  +A  D  +
Sbjct: 289 TKKGQGYKLAENDPVKYHAIGKTN-APSEKPAVP----KPTYTQIFGKWLCDQAASDPRL 343

Query: 422 VVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRA 481
           V +   M     L  +++KFPERYFDVG+AEQHAVTF+ GLAC G KP   I S FLQRA
Sbjct: 344 VAITPAMREGSGLVEYEQKFPERYFDVGIAEQHAVTFAGGLACEGAKPVVAIYSTFLQRA 403

Query: 482 YDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVD 541
           YDQ+V+D+  Q LPV F I  AG+VG+DGPT  G +D++F+ C+PNM++ APSDE+E   
Sbjct: 404 YDQLVHDIALQNLPVLFAIDRAGIVGADGPTHAGLYDLSFLRCVPNMVIAAPSDENECRL 463

Query: 542 MVATVASIDDRPVCFRYPRGAIVRTDLP-GYRGIPIEIGKGKVLVEGKDVALLGYGAMVQ 600
           +++T   + D P   RYPRG+     +  G   +P  +GKG V  EG+  A+  +G+MVQ
Sbjct: 464 LLSTCYQL-DAPTAVRYPRGSGTGATVSDGLDTVP--VGKGVVRREGRQTAVFAFGSMVQ 520

Query: 601 NCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSH 659
             L+A   L     D TVAD RF KPLD +L+ +L Q+H +L++VEE ++ GG GS V  
Sbjct: 521 PALEAAETL-----DATVADMRFVKPLDEELILKLAQSHDYLVSVEENAVQGGAGSAVLE 575

Query: 660 FIALDGLLDSGVKWRPIVL---PDNYIEHASPTQQLALAGLT 698
            +A  G+       +P++L    D   EH  P + L   GL+
Sbjct: 576 TLAKHGIT------KPVLLLGVDDVVTEHGDPGKLLDDLGLS 611


>gi|428204354|ref|YP_007082943.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pleurocapsa sp. PCC 7327]
 gi|427981786|gb|AFY79386.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pleurocapsa sp. PCC 7327]
          Length = 636

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 246/632 (38%), Positives = 361/632 (57%), Gaps = 21/632 (3%)

Query: 85  VENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDK 144
           + +P +L  L+I++L+ +A +IR +    ++ +   L   L  VELT+AL+       DK
Sbjct: 6   ITHPNQLHGLSIRQLEDIARQIREKHLQTIAASGGHLGPGLGVVELTLALYQTLDLDRDK 65

Query: 145 ILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGM 204
           ++WDVG Q Y HK+LTGR    HTLR+KDGI+GY  R ES++D F AGH   S+SA LGM
Sbjct: 66  VIWDVGHQAYPHKMLTGRYHRFHTLRQKDGIAGYLKRCESKFDHFGAGHASTSISAALGM 125

Query: 205 AVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPKIEES 263
           A+ARD KG+   +V +I +G    G A EA+++AG+L  +N++V+LND+  S+ P     
Sbjct: 126 ALARDAKGEDFKVVAIIGDGALTGGMALEAINHAGHLPHTNLMVVLNDNEMSISP----- 180

Query: 264 PKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRI---GRGMHEWAAKVDEYARGMIGPQ 320
              ++ A+S  L++++ S   + + +  +   K +   G  +     ++ E  + +  P+
Sbjct: 181 ---NVGAISRYLNKVRLSDPIQFISDNLEEQFKHLPFFGESLTPEMERLKEGMKRLAVPK 237

Query: 321 GSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSEA 380
              + EELG  Y GP+DGHN+ +LIS  ++   +   GPV VHV T + +  E  +K + 
Sbjct: 238 VGAVIEELGFTYFGPIDGHNLSELISTFKQAHKV--PGPVFVHVATVKGKGYEVAEKDQV 295

Query: 381 IEKQQEG---ASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLF 437
               Q     A+             Y   F   L   AE +  I+ + A M     L   
Sbjct: 296 GYHAQNPFNLATGKPIPSSKPKPPAYSKVFGHTLTRLAENNPKIIGITAAMATGTGLDKL 355

Query: 438 QEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVR 497
             K P++Y DVG+AEQHAVT +AGLAC G++P   I S FLQRAYDQV++DV  Q LPV 
Sbjct: 356 HAKLPKQYIDVGIAEQHAVTLAAGLACEGMRPVVAIYSTFLQRAYDQVIHDVCIQNLPVF 415

Query: 498 FVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFR 557
           F +  AG+VG+DGPT  G +DI ++ C+PNM+ MAP DE EL  MV T  +  D P+  R
Sbjct: 416 FCMDRAGIVGADGPTHQGLYDIAYLRCIPNMVAMAPKDEAELQRMVVTGINYTDGPIAMR 475

Query: 558 YPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVT 617
           YPRG  +   L      P+ IGKG++L  G DV LLGYG MV   ++   +LS+ G++ T
Sbjct: 476 YPRGNGIGVPLMEEGWEPLPIGKGEILRNGDDVLLLGYGTMVNTAMQVAEILSEHGVEAT 535

Query: 618 VADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVKWRPI 676
           V +ARF KPLD +L+  L Q    ++T+EEG + GGFGS V+  +  + +L   V  +  
Sbjct: 536 VINARFVKPLDTELILPLAQRIGKVVTLEEGCLMGGFGSAVAEALQDNKIL---VPVKRF 592

Query: 677 VLPDNYIEHASPTQQLALAGLTGHHIAATALS 708
            +PD  ++HA P + L   GLTG  IA   L 
Sbjct: 593 GVPDKLVDHAKPDESLVDLGLTGSQIAEQVLG 624


>gi|77165220|ref|YP_343745.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrosococcus oceani ATCC
           19707]
 gi|254434625|ref|ZP_05048133.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrosococcus oceani
           AFC27]
 gi|119368200|sp|Q3JAD1.1|DXS_NITOC RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|76883534|gb|ABA58215.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrosococcus oceani ATCC
           19707]
 gi|207090958|gb|EDZ68229.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrosococcus oceani
           AFC27]
          Length = 640

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 254/631 (40%), Positives = 369/631 (58%), Gaps = 63/631 (9%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+L+ +++P RL+ L   +L+ LA E+R  L   V+++   L + L  +ELT+ALH++F 
Sbjct: 8   PLLEQIDSPERLRRLPESDLETLAEELRDFLLHSVARSGGHLAAGLGTIELTIALHYIFA 67

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG Q Y HK+LTGRR  + T+R+  G++ + SR ES YD F  GH   S+S
Sbjct: 68  TPEDRLVWDVGHQAYPHKVLTGRRERLGTIRQAGGLAPFPSRHESPYDTFGVGHSSTSIS 127

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           A LGMA+A + KG++   V +I +G   AG AYEA+ +AG L ++++VILND+  S+ P 
Sbjct: 128 AALGMAIAANEKGEKRKTVAIIGDGGMTAGMAYEALDHAGALGADLLVILNDNEMSISP- 186

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                  ++ A+SS L+R+ S + +  +RE +K + +R+   M E A + +E+ +GM+ P
Sbjct: 187 -------NVGAISSYLTRLLSGRVYSTVREGSKKVLERMPPPMWELARRTEEHVKGMVAP 239

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVT---------EENR 370
              TLFEE+G  Y GP+DGH++  LI  L+ +  L   GP L+H+VT         EEN 
Sbjct: 240 --GTLFEEMGFNYFGPIDGHDLSSLIRTLRNLHKL--TGPRLLHIVTCKGKGYTLAEENP 295

Query: 371 RAED--TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGM 428
                 T     +  QQ     S+++       +Y   F + L   A +D  +V +   M
Sbjct: 296 VTYHGVTPFDPKVGIQQGPQKPSSAM-------SYTQVFSQWLCDMAAQDGLLVGITPAM 348

Query: 429 EMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVND 488
                L  F E FPERYFDV +AEQH+VT +AG+AC GLKP   I S FLQRAYDQ+++D
Sbjct: 349 REGSGLVKFSECFPERYFDVAIAEQHSVTLAAGMACDGLKPVVAIYSTFLQRAYDQLIHD 408

Query: 489 VDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVAS 548
           V  Q LPV F I  AG+VG DGPT  G+FD+T++ C+PN++VMAP+DE+E   M+ T   
Sbjct: 409 VALQNLPVLFAIDRAGVVGPDGPTHAGSFDLTYLRCIPNLVVMAPADENECRQMLYT-GF 467

Query: 549 IDDRPVCFRYPRGAIVRTDLPGYRGIPIE-------IGKGKVLVEGKDVALLGYGAMVQN 601
           + ++P   RYPRG           G+ +E       +GK ++  +G+ +A+L +GA V  
Sbjct: 468 LLNQPAAVRYPRGK--------GPGVAVEASMTALPLGKAELKRKGRGIAILAFGATVAP 519

Query: 602 CLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHF 660
            L+A   L     D TV + RF KPLD  LV E+  NH  L+TVE+  I GG GS VS  
Sbjct: 520 ALEAAEKL-----DATVVNMRFVKPLDEDLVLEMAMNHELLVTVEDNVIAGGAGSAVSEC 574

Query: 661 IALDG----LLDSGVKWRPIVLPDNYIEHAS 687
           +A  G    LL  G       LPDN++EH S
Sbjct: 575 LAYHGVSVPLLLHG-------LPDNFLEHGS 598


>gi|407692804|ref|YP_006817593.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus suis
           H91-0380]
 gi|407388861|gb|AFU19354.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus suis
           H91-0380]
          Length = 617

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 253/624 (40%), Positives = 374/624 (59%), Gaps = 33/624 (5%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+L  + +P  L+ L  ++L+ +A E+R+ L   VS+T   L S L  VELTVALH+V+ 
Sbjct: 6   PLLSQINSPEDLRLLAKEQLQPVADELRAYLLESVSQTSGHLASGLGVVELTVALHYVYQ 65

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG Q Y HKILTGRR  +HT+R+K+GI  +  R ES YD  + GH   S+S
Sbjct: 66  TPFDQLIWDVGHQAYPHKILTGRRDQMHTIRQKNGIHPFPWREESLYDVLSVGHSSTSIS 125

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           AG+G+AVA + +      V VI +G   AG A+EAM++AG + ++M+VILND+  S+   
Sbjct: 126 AGVGIAVAAEKENAGRKTVCVIGDGAITAGMAFEAMNHAGAMHTDMLVILNDNEMSI--- 182

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                  ++ AL++ L+RI S   +  +R+ +K +  ++   +  +  K +E+ +G+I P
Sbjct: 183 -----SENVGALNNHLARIFSGSIYTTVRDGSKKVLDKVPT-IKNFMKKSEEHMKGVISP 236

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
           + STLFEELG  YIGPVDGHNI++L+  L  +  L   GP  +H+ T++ +  E  + ++
Sbjct: 237 E-STLFEELGFNYIGPVDGHNIDELVKTLSNMREL--KGPQFLHIRTKKGKGYEPAE-ND 292

Query: 380 AIEKQQEGASDSN--SLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLF 437
            I        D     LP      TY D F   L   AE+D  ++ +   M     +  F
Sbjct: 293 PIGYHGVPKFDPTCGQLPKSKTIPTYSDIFGNWLCEMAEQDSKLIGITPAMREGSGMVEF 352

Query: 438 QEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVR 497
            ++FPE+YFDV +AEQHAVTF AGLA  G KP   I S+FLQRAYDQ+++DV  Q LPV 
Sbjct: 353 SKRFPEQYFDVAIAEQHAVTFGAGLAIAGYKPVVAIYSSFLQRAYDQLIHDVAIQNLPVI 412

Query: 498 FVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFR 557
           F I  AG+VG+DG T  GAFD++FM C+PNM +M PSDE+E+  M+ T   + + P   R
Sbjct: 413 FAIDRAGIVGADGQTHQGAFDVSFMRCIPNMTIMCPSDENEMRQMLYTAYRM-NTPTAVR 471

Query: 558 YPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVT 617
           YPRG      L   +   +E+GKGK++ +G+ VA+L +G ++    +AR +  K   + T
Sbjct: 472 YPRGNAQGVALEPMQA--LEVGKGKLIQQGQKVAILNFGPLLN---EARIVAEKH--NYT 524

Query: 618 VADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVKWRPI 676
           + D RF KPLD +LV EL  +H  L+T+EE +I GG GS V+ ++   G      K RP+
Sbjct: 525 LVDMRFVKPLDEQLVAELADSHDLLVTLEENAIQGGAGSFVNEYLQKIG------KIRPL 578

Query: 677 VL---PDNYIEHASPTQQLALAGL 697
           V+   PD ++  A+  +  A  GL
Sbjct: 579 VMLGIPDFFVPQATQAESYADLGL 602


>gi|392556151|ref|ZP_10303288.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudoalteromonas undina
           NCIMB 2128]
          Length = 620

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 251/634 (39%), Positives = 378/634 (59%), Gaps = 32/634 (5%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           D    P+L+LV  P  L+ L   +L   + E+R  L + VS++   L S L  VELTVAL
Sbjct: 4   DSSKYPLLNLVNEPAHLRDLAQDKLPAFSHELRDYLLNSVSQSSGHLASGLGTVELTVAL 63

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H+V++ P D+++WDVG Q Y HKILTGRR  +HT+R+KDG+  +  R ESEYD F+ GH 
Sbjct: 64  HYVYNTPDDRLVWDVGHQAYPHKILTGRRDQMHTIRQKDGLHPFPFRDESEYDTFSVGHS 123

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA LGM++A   +GK    V VI +G   AG A+EAM++ G + S+M++ILND+  
Sbjct: 124 STSISAALGMSIAAQKEGKGRKTVAVIGDGAITAGMAFEAMNHLGDVKSDMLIILNDN-- 181

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
                 E S   ++ AL++  +RI S   +  +RE +K +   +   + E A++++E+ +
Sbjct: 182 ------EMSISENVGALTNHFARILSGSFYTNIREGSKKLLSGV-PPVKELASRMEEHIK 234

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAED 374
           GM+ P   T FEELGL YIGP+DGH++  L+  L+ + +L   GP L+H+ T+   + + 
Sbjct: 235 GMMIP--GTFFEELGLNYIGPIDGHDVNMLVDTLRNMRNL--KGPQLLHIKTQ---KGKG 287

Query: 375 TQKSEAIEKQQEGASD----SNSLPFGNYS-RTYDDCFIEALVMEAEKDKDIVVVHAGME 429
            + +EA      G       ++SLP    S  T+ + F + L   AE+D  ++ +   M 
Sbjct: 288 YKPAEADPIGYHGVPKFDPATSSLPKSKPSAATFSNVFGDWLCDMAEQDSKLMAITPAMR 347

Query: 430 MDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDV 489
               +  F ++ PE+YFDV +AEQHAVT +AG AC GLKP   I S+FLQRAYDQ+++DV
Sbjct: 348 EGSGMVRFSKEHPEQYFDVAIAEQHAVTLAAGFACEGLKPVVAIYSSFLQRAYDQLIHDV 407

Query: 490 DQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASI 549
             Q LPV F I  AG+VG+DG T  GA+D++FM C+PNM++MAPSD +E   M+ T    
Sbjct: 408 ALQNLPVLFAIDRAGIVGADGETHQGAYDLSFMRCIPNMVIMAPSDTNECRQMLYTGYQA 467

Query: 550 DDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALL 609
            + PV  RYPRG+    ++       +EIGK  V+ +G  VA+L +G +++N     A L
Sbjct: 468 -NCPVAVRYPRGSAGTAEIQSAMQ-QLEIGKANVIKQGAKVAILSFGTLLEN-----AQL 520

Query: 610 SKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLD 668
           +   ++ T+ + RF KPLD  L+ EL  NH  ++T+E+ +I GG GS V+ ++A      
Sbjct: 521 ATDELNATLVNMRFIKPLDTGLIDELVANHDIIVTLEDNAISGGAGSAVNEYLATQ---K 577

Query: 669 SGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHI 702
           + VK   + +PD +I+H +  Q     GL G  I
Sbjct: 578 AAVKILNLGIPDEFIKHGTQQQMHDEMGLGGQGI 611


>gi|307150889|ref|YP_003886273.1| deoxyxylulose-5-phosphate synthase [Cyanothece sp. PCC 7822]
 gi|306981117|gb|ADN12998.1| deoxyxylulose-5-phosphate synthase [Cyanothece sp. PCC 7822]
          Length = 635

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 249/646 (38%), Positives = 369/646 (57%), Gaps = 30/646 (4%)

Query: 82  LDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAP 141
           L  + +P +L  L+I++L+ +A +IR +    V+ +   L   L  VELT+AL+      
Sbjct: 3   LSEITHPNQLHGLSIRQLEDVARQIREKHLQTVATSGGHLGPGLGVVELTIALYQTLDLD 62

Query: 142 VDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAG 201
            DK++WDVG Q Y HK+LTGR +  HTLR+KDGI+GY  R ES++D F AGH   S+SA 
Sbjct: 63  RDKVIWDVGHQAYPHKMLTGRYNRFHTLRQKDGIAGYLKRCESKFDHFGAGHASTSISAA 122

Query: 202 LGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPKI 260
           LGMA+ARD KG+   +V +I +G    G A EA+++AG+L  +N++V+LND+  S+ P  
Sbjct: 123 LGMALARDAKGEDFKVVAIIGDGALTGGMALEAINHAGHLPHTNLMVVLNDNEMSISP-- 180

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGM---I 317
                 ++ A+S  L++++ S   + L +  +   K +     +   ++D    GM    
Sbjct: 181 ------NVGAISRYLNKVRLSDPVQFLSDNLEEQFKHLPF-FGDVTPEMDRLKEGMKRLA 233

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQK 377
            P+   + EELG  Y GP+DGHN+ +LI   ++   +   GPV VHV T + +  E  +K
Sbjct: 234 VPKVGAVIEELGFKYFGPIDGHNLRELIDTFKQAHKV--HGPVFVHVSTTKGKGYELAEK 291

Query: 378 SEAIEKQQEG---ASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
            +     Q     A+             Y   F   L   A+ +  I+ + A M     L
Sbjct: 292 DQVGYHAQSPFNLATGKPVPSSKPKPPGYSKVFAHTLTTLAQNNPKIIGITAAMATGTGL 351

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
              Q+K P++Y DVG+AEQHAVT +AGLAC G++P   I S FLQRAYDQ+++DV  Q L
Sbjct: 352 DKLQQKLPKQYIDVGIAEQHAVTLAAGLACEGMRPVVAIYSTFLQRAYDQIIHDVCIQNL 411

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PV F +  AG+VG+DGPT  G +DI ++ C+PN+++MAP DE EL  M+ T  +  D P+
Sbjct: 412 PVFFCMDRAGIVGADGPTHQGMYDIAYLRCIPNLVIMAPKDEAELQQMIVTGINYTDGPI 471

Query: 555 CFRYPRGAIVRTDL--PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
             RYPRG  +   L   G+  +P  IGKG++L  G D+ LLGYG MV   ++   +LS+ 
Sbjct: 472 AMRYPRGNGLGVPLMEEGWESLP--IGKGEILRNGDDLLLLGYGTMVNTAMQVAEILSEH 529

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSG- 670
           GI+ +V +ARF KPLD +L+  L Q    ++T+EEG + GGFGS V+     + LLD+  
Sbjct: 530 GIEASVVNARFVKPLDTELILPLAQQTGKVVTLEEGCLMGGFGSAVA-----EALLDNNV 584

Query: 671 -VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTRE 715
            V  +   +PD  ++HA P Q  A  GLT   IA   L     ++E
Sbjct: 585 LVPVKRFGIPDQLVDHAKPDQSFADLGLTSSQIAQEVLKSFFSSKE 630


>gi|345874708|ref|ZP_08826508.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria weaveri LMG
           5135]
 gi|343970067|gb|EGV38265.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria weaveri LMG
           5135]
          Length = 625

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 262/642 (40%), Positives = 377/642 (58%), Gaps = 56/642 (8%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD ++ P  L+ L  K+L Q+A E+RS L   V +T     S+L AVELTVALH+V+
Sbjct: 4   TPLLDTIDLPEDLRLLDKKQLPQVAAELRSFLLDSVGQTGGHFASNLGAVELTVALHYVY 63

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P DK++WDVG Q+Y HKILTGR++ + T+R+  G++G+  RSES+YD F  GH   S+
Sbjct: 64  NTPDDKLVWDVGHQSYPHKILTGRKNRMRTMRQYGGLAGFPKRSESDYDAFGVGHSSTSI 123

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLH 257
            A LGMAVA  + G     V +I +G   AGQA+EA++ AG + D N++VILND+  S+ 
Sbjct: 124 GAALGMAVADKLNGSPNRSVAIIGDGAMTAGQAFEALNCAGDMEDVNLLVILNDNEMSIS 183

Query: 258 PKIEESPK-------TSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVD 310
           P +   PK         ++ L ST+ + QS+K   +L             G  E A KV+
Sbjct: 184 PNVGALPKYLARNVVRDMHGLLSTI-KAQSTKVLDKL------------PGALEIAQKVE 230

Query: 311 EYARGMIG-----PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVV 365
              + + G      Q  +LFE  G  Y GPVDGH++E+L+ VL+++ +    GP ++HV+
Sbjct: 231 HKIKTIAGEAEHAKQSLSLFENFGFQYTGPVDGHDVENLVDVLKDLRA--KKGPQILHVI 288

Query: 366 TEENR----RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDI 421
           T++ +       D  K  AI K     S+  ++P      TY   F + L  +A  D  +
Sbjct: 289 TKKGQGYKLAENDPVKYHAIGKTN-APSEKPAVP----KPTYTQIFGKWLCDQAAADPRL 343

Query: 422 VVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRA 481
           V +   M     L  +++KFPERYFDVG+AEQHAVTF+ GLAC G KP   I S FLQRA
Sbjct: 344 VAITPAMREGSGLVEYEQKFPERYFDVGIAEQHAVTFAGGLACEGAKPVVAIYSTFLQRA 403

Query: 482 YDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVD 541
           YDQ+V+D+  Q LPV F I  AG+VG+DGPT  G +D++F+ C+PNM++ APSDE+E   
Sbjct: 404 YDQLVHDIALQNLPVLFAIDRAGIVGADGPTHAGLYDLSFLRCVPNMVIAAPSDENECRL 463

Query: 542 MVATVASIDDRPVCFRYPRGAIVRTDLP-GYRGIPIEIGKGKVLVEGKDVALLGYGAMVQ 600
           +++T   + D P   RYPRG+     +  G   +P  +GKG V  EG+  A+  +G+MVQ
Sbjct: 464 LLSTCYQL-DAPTAVRYPRGSGTGATVSDGLDTVP--VGKGVVRREGRQTAVFAFGSMVQ 520

Query: 601 NCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSH 659
             L+A   L     D TVAD RF KPLD +L+ +L Q+H +L++VEE ++ GG GS V  
Sbjct: 521 PALEAAETL-----DATVADMRFVKPLDEELILKLAQSHDYLVSVEENAVQGGAGSAVLE 575

Query: 660 FIALDGLLDSGVKWRPIVL---PDNYIEHASPTQQLALAGLT 698
            +A  G+       +P++L    D   EH  P + L   GL+
Sbjct: 576 TLAKHGIT------KPVLLLGVDDVVTEHGDPGKLLDDLGLS 611


>gi|218245352|ref|YP_002370723.1| 1-deoxy-D-xylulose-5-phosphate synthase [Cyanothece sp. PCC 8801]
 gi|226740147|sp|B7JVJ6.1|DXS_CYAP8 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|218165830|gb|ACK64567.1| deoxyxylulose-5-phosphate synthase [Cyanothece sp. PCC 8801]
          Length = 636

 Score =  441 bits (1133), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 251/642 (39%), Positives = 366/642 (57%), Gaps = 27/642 (4%)

Query: 85  VENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDK 144
           + +P +L  L+I++L+ +A +IR +    ++ T   L   L  VELT+AL+       DK
Sbjct: 6   ITHPNQLHGLSIRQLEDVARQIREKHLQTIAATGGHLGPGLGVVELTIALYQTLDLDRDK 65

Query: 145 ILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGM 204
           + WDVG Q Y HK+LTGR    HTLR+KDGI+GY  R ES++D F AGH   S+SA LGM
Sbjct: 66  VTWDVGHQAYPHKMLTGRYKNFHTLRQKDGIAGYLKRCESKFDHFGAGHASTSISAALGM 125

Query: 205 AVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPKIEES 263
           A+ARD +G+   +V VI +G    G A EA+++AG+L  +N++V+LND+  S+ P     
Sbjct: 126 ALARDAQGEDYKVVAVIGDGALTGGMALEAINHAGHLPHTNLMVVLNDNEMSISP----- 180

Query: 264 PKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRI---GRGMHEWAAKVDEYARGMIGPQ 320
              ++ A+S  L++++ S   + L +  +   K +   G  +     +V E  + +   +
Sbjct: 181 ---NVGAISRYLNKVRLSDPVQFLADNLEEQFKHLPFFGDSLSPEMERVKEGMKRLAVSK 237

Query: 321 GSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSEA 380
              + EELG  Y GP+DGHN+++LIS  ++   +   GPVLVHV T + +  E  +K + 
Sbjct: 238 VGAVIEELGFKYFGPIDGHNLQELISTFKQAHKV--TGPVLVHVATVKGKGYELAEKDQV 295

Query: 381 IEKQQE------GASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
               Q       G +  +S P      +Y   F   L   AE +  I+ + A M     L
Sbjct: 296 GYHAQSPFNLATGKAIPSSKP---KPPSYAKVFAHTLTTLAENNPKIIGITAAMATGTGL 352

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
              Q K P++Y DVG+AEQHAVT + GLAC G++P   I S FLQRAYDQV++DV  Q L
Sbjct: 353 DKLQAKLPKQYIDVGIAEQHAVTLAGGLACEGMRPVVAIYSTFLQRAYDQVLHDVCIQNL 412

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PV F +  AG+VG+DGPT  G +DI ++ C+PNM +MAP DE EL  M+ T  +  D P+
Sbjct: 413 PVFFCMDRAGIVGADGPTHQGMYDIAYLRCIPNMTIMAPKDEAELQRMIVTGVNYTDGPI 472

Query: 555 CFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGI 614
             RYPRG  +   L      P+ IGKG++L  G D+ +LGYG MV   L+A   L + GI
Sbjct: 473 AMRYPRGNGIGVPLMEEGWEPLPIGKGEILRNGDDLLILGYGTMVNTALQAAETLREHGI 532

Query: 615 DVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVKW 673
           + TV +ARF KPLD +L+  L Q    ++T+EEG + GGFGS V+   +   +L   V  
Sbjct: 533 EATVVNARFVKPLDTELILPLAQRIGKVVTLEEGCLMGGFGSAVAEAFSDHNVL---VPL 589

Query: 674 RPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTRE 715
           +   +PD  ++HA+P Q  A  GLT   IA   L +    R+
Sbjct: 590 KRFGVPDRLVDHATPDQSKADLGLTSPQIAEQILQVFFSNRQ 631


>gi|167854994|ref|ZP_02477768.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus parasuis
           29755]
 gi|167853842|gb|EDS25082.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus parasuis
           29755]
          Length = 615

 Score =  441 bits (1133), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 251/635 (39%), Positives = 372/635 (58%), Gaps = 31/635 (4%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+L  + +P  L+ L   +L+ L  E+R+ L   VS+T   L S L  VELTVALH+V+ 
Sbjct: 6   PLLSQINSPDDLRLLPKDKLQPLCDELRAYLLESVSQTSGHLASGLGVVELTVALHYVYQ 65

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG Q Y HKILTGRR  +HT+R+KDG+  +  R ES +D  + GH   S+S
Sbjct: 66  TPFDQLIWDVGHQAYPHKILTGRRDQMHTIRQKDGLHPFPWREESPFDVLSVGHSSTSIS 125

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           AGLG+AVA + +      V VI +G   AG A+EA+++AG + +NM+VILND+  S+   
Sbjct: 126 AGLGIAVAAEKENAGRKTVCVIGDGAITAGMAFEAINHAGSIHTNMLVILNDNEMSI--- 182

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                  ++ AL++ L+R+ +   +  LRE  K +   I   + E+  K +E+ +G + P
Sbjct: 183 -----SENVGALNNHLARLFTGSLYGTLREGGKKLLSGI-PSIKEFVRKTEEHVKGFVSP 236

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
            G T+FE LG  YIGP+DGH+IE+LIS L+ + ++   GP  +H+ T++ +     ++  
Sbjct: 237 VG-TMFETLGFNYIGPIDGHDIEELISTLKNMRNMS--GPQFLHIKTKKGKGYTPAEQDP 293

Query: 380 -AIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQ 438
                  +    S  LP      TY + F + L   AE+D  I+ +   M     +  F 
Sbjct: 294 IGFHGVPKFDHTSGKLPQTKSVPTYSNIFGDWLCEMAERDPKIIGITPAMREGSGMVEFS 353

Query: 439 EKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRF 498
           ++FP++YFDV +AEQHAVTF AGLA  G KP   I S+FLQRAYDQ+++DV  Q LPV F
Sbjct: 354 KRFPQQYFDVAIAEQHAVTFGAGLAIAGYKPVVAIYSSFLQRAYDQLIHDVAIQNLPVIF 413

Query: 499 VITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRY 558
            I  AG+VG+DG T  GAFD++FM C+PNM +M PSDE+E+  M+ T  +++  PV  RY
Sbjct: 414 AIDRAGIVGADGQTHQGAFDLSFMRCVPNMTIMCPSDENEMRQMLYTAYTMNS-PVAVRY 472

Query: 559 PRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTV 618
           PRG     +L   +   +EIGKGKVL +G+ VA+L +GA++    +          + T+
Sbjct: 473 PRGNAQGVELQPMQA--LEIGKGKVLKQGEKVAILNFGALLNEAKQVAETH-----NYTL 525

Query: 619 ADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVKWRPIV 677
            D RF KPLD  L+ EL   H  L+T+EE ++ GG GS V+ ++   G      K +P++
Sbjct: 526 VDMRFAKPLDEALIAELADRHELLVTLEENALQGGAGSAVNEYLQHIG------KIKPLL 579

Query: 678 L---PDNYIEHASPTQQLALAGLTGHHIAATALSL 709
           +   PD +I  A+  +  A  GL    I    LS+
Sbjct: 580 MLGIPDFFIPQATQAESYADLGLDAKGIEQKILSM 614


>gi|186472775|ref|YP_001860117.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia phymatum
           STM815]
 gi|229813274|sp|B2JP68.1|DXS_BURP8 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|184195107|gb|ACC73071.1| deoxyxylulose-5-phosphate synthase [Burkholderia phymatum STM815]
          Length = 632

 Score =  441 bits (1133), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 267/644 (41%), Positives = 375/644 (58%), Gaps = 52/644 (8%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L  +++P  L+ L  ++L+ LA E+R+ +   VS+T   L S+L  VELT+ALH+VF  
Sbjct: 4   LLKTIDDPADLRRLDRRQLQPLADELRAFVLDSVSQTGGHLSSNLGTVELTIALHYVFDT 63

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+I+WDVG QTY HKILTGRR  + TLR+  GISG+  R ES YD F   H   S+SA
Sbjct: 64  PRDRIVWDVGHQTYPHKILTGRRDQMSTLRQLGGISGFPKRDESPYDTFGTAHSSTSISA 123

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDS-NMIVILNDSRHSLHPK 259
            LGMA+   ++G     + VI +G   AG A+EAM+NAG  D   ++VILND+  S+ P 
Sbjct: 124 ALGMAIGSKLRGDDRFAIAVIGDGAMTAGMAFEAMNNAGVEDDVPLLVILNDNDMSISP- 182

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGR---GMHEWAAKVDEYARGM 316
                   + AL+  L+R+ S + +      A+   +R+ R    + + A K++E+A+GM
Sbjct: 183 -------PVGALNRHLARLMSGRFY----AAARAGVERVLRHAPPVLDLARKLEEHAKGM 231

Query: 317 IGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQ 376
           I P  +TLFEE G  YIGP+DGH+++ LI  LQ +  L   GP  +HVVT   ++ +  +
Sbjct: 232 IVP--ATLFEEFGFNYIGPIDGHDLDSLIPTLQNIKEL--RGPQFLHVVT---KKGQGYK 284

Query: 377 KSEAIEKQQEGASDSNSLPFGNYS-----RTYDDCFIEALVMEAEKDKDIVVVHAGMEMD 431
            +EA      G    N       S     +TY   F E L   AE D  +V +   M   
Sbjct: 285 LAEADPVLYHGPGKFNPAEGIKPSTTPAKKTYTQVFGEWLCDAAELDSRVVGITPAMREG 344

Query: 432 LSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQ 491
             +  F+++FP+RY+DVG+AEQHAVTF+ GLA  G+KP   I S FLQR YDQ+++DV  
Sbjct: 345 SGMVEFEKRFPDRYYDVGIAEQHAVTFAGGLATEGMKPVVAIYSTFLQRGYDQLIHDVAL 404

Query: 492 QRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDD 551
           Q LPV F I  AGLVG+DG T  GA+D+ FM C+PNM +MA SDE+E   M+ T A    
Sbjct: 405 QNLPVVFAIDRAGLVGADGATHAGAYDLAFMRCIPNMTIMAASDENECRQMLYT-ALQQP 463

Query: 552 RPVCFRYPRGAIVRTDLPGYRGI-PIEIGKGKVLVE-----GKDVALLGYGAMVQNCLKA 605
            P   RYPRGA   T +   + +  + +GKG+V  +     GK +A+L +G MV   L A
Sbjct: 464 NPTAVRYPRGA--GTGVATVKQMAALPLGKGEVRRQSTQPAGKRIAILAFGTMVAPSLAA 521

Query: 606 RALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALD 664
              L     D TVA+ RF KP+D  LVREL + H  ++TVEEG + GG GS       ++
Sbjct: 522 AEQL-----DATVANMRFVKPIDAALVRELAETHDAVVTVEEGCVMGGAGS-----ACVE 571

Query: 665 GLLDSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAAT 705
            +++SGV  RP++   LPD +I+H  P + LA  GL    IA +
Sbjct: 572 AMMESGV-IRPVLQLGLPDRFIDHGDPAKLLASCGLDAAGIAKS 614


>gi|393778038|ref|ZP_10366321.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ralstonia sp. PBA]
 gi|392714924|gb|EIZ02515.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ralstonia sp. PBA]
          Length = 642

 Score =  441 bits (1133), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 260/643 (40%), Positives = 371/643 (57%), Gaps = 46/643 (7%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L+ +++P  L+ L  ++L  LA ++R  +   VS+T   L S+L  VELT+ALH+VF+ 
Sbjct: 7   LLNTIDSPSDLRKLDRRQLPALADQLRQFVLESVSQTGGHLSSNLGTVELTIALHYVFNT 66

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+++WDVG Q+Y HKILTGRR  +HTLR+ DGISG+  RSESEYD F   H   S+SA
Sbjct: 67  PEDRVVWDVGHQSYPHKILTGRRERMHTLRQLDGISGFPRRSESEYDTFGTAHSSTSISA 126

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAG-YLDSNMIVILNDSRHSLHPK 259
            LGMA+    KG+    + VI +G   AG A+EAM+NAG Y D  ++VILND+  S+ P 
Sbjct: 127 ALGMALGAKTKGEDRVAIAVIGDGAMTAGMAFEAMNNAGVYRDVPLLVILNDNDMSISPP 186

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTK--RIGRGMHEWAAKVDEYARGMI 317
                   + AL+  L+R+ S + +   +   KG+ K   +   + E+A + +E+A+GM+
Sbjct: 187 --------VGALNRYLARLMSGRFYAATK---KGIEKVLSVAPPVLEFAKRFEEHAKGML 235

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASL--GSMGPVLVHVVTEENRRAEDT 375
            P  +T+FEE G  YIGP+DGH++E L+  LQ +  L     GP  +HVVT   R+ +  
Sbjct: 236 VP--ATMFEEFGFNYIGPIDGHDLESLVPTLQNIRELAHAGRGPQFLHVVT---RKGQGY 290

Query: 376 QKSEAIEKQQEGASDSNSL----PFGNYSR-TYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
           + +EA      G    +      P    SR  Y   F + L   A  D  +V +   M  
Sbjct: 291 KLAEADPVLYHGPGKFDPAEGIRPAAKPSRPAYTKVFGDWLCDMAAADARLVGITPAMRE 350

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              +  F+ +FP+RY+DVG+AEQHAVTF+ GLAC G+KP   I S FLQRAYDQ+++DV 
Sbjct: 351 GSGMVEFERRFPDRYYDVGIAEQHAVTFAGGLACEGMKPVVAIYSTFLQRAYDQLIHDVA 410

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q LPV F +  AGLVG+DG T  GA+DI ++ C+PNM++M P+DE+E   M+ T     
Sbjct: 411 LQNLPVLFALDRAGLVGADGATHAGAYDIAYLRCIPNMLIMTPADENECRQML-TTGFRH 469

Query: 551 DRPVCFRYPRGA--IVRTDLPGYRGIPIEIGKGKV-----LVEGKDVALLGYGAMVQNCL 603
           D P   RYPRGA   V  D      +P  +GKG+V        G+  A+L +G+M+   L
Sbjct: 470 DGPASVRYPRGAGPGVAVDA-ALSALP--VGKGEVRRTGHAPAGQRTAILAFGSMLHPAL 526

Query: 604 KARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIA 662
            A   L     D TV + RF KPLD++L+R L  +H   +TVEEG + GG GS     +A
Sbjct: 527 AAGEAL-----DATVVNMRFVKPLDVELLRTLAADHDRFVTVEEGCVMGGAGSACLEALA 581

Query: 663 LDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAAT 705
               +D  +    + LPD +++H  P   LA  GL    I A+
Sbjct: 582 ---AMDIALPVLQLGLPDRFVDHGDPALLLAQCGLDAKGIEAS 621


>gi|315125808|ref|YP_004067811.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudoalteromonas sp.
           SM9913]
 gi|315014322|gb|ADT67660.1| 1-deoxy-D-xylulose 5-phosphate synthase (DXP synthase)
           [Pseudoalteromonas sp. SM9913]
          Length = 620

 Score =  441 bits (1133), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 250/642 (38%), Positives = 383/642 (59%), Gaps = 32/642 (4%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           D    P+LDLV  P  L+ L   +L   + E+R  L + VS++   L S L  VELTVAL
Sbjct: 4   DSSKYPLLDLVNEPAHLRDLAQDKLPAFSHELRDYLLNSVSQSSGHLASGLGTVELTVAL 63

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H+V++ P D+++WDVG Q Y HKILTGRR  +HT+R+KDG+  +  R ESEYD F+ GH 
Sbjct: 64  HYVYNTPEDRLVWDVGHQAYPHKILTGRRDQMHTIRQKDGLHPFPFRDESEYDTFSVGHS 123

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA LGM++A   +GK    V VI +G   AG A+EAM++ G + S+M++ILND+  
Sbjct: 124 STSISAALGMSIAAQKEGKGRKTVAVIGDGAITAGMAFEAMNHLGDVKSDMLIILNDN-- 181

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
                 E S   ++ AL++  +RI S   +  +RE +K +   +   + E A++++E+ +
Sbjct: 182 ------EMSISENVGALTNHFARILSGSFYTNIREGSKKLLSGV-PPVKELASRMEEHIK 234

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAED 374
           GM+ P   T FEELGL YIGP+DGH++  L+  L+ + +L   GP L+H+ T+   + + 
Sbjct: 235 GMMIP--GTFFEELGLNYIGPIDGHDVNMLVDTLRNMRNL--KGPQLLHIKTQ---KGKG 287

Query: 375 TQKSEAIEKQQEGASD----SNSLPFGN-YSRTYDDCFIEALVMEAEKDKDIVVVHAGME 429
            + +EA      G       ++SLP     + T+ + F + L   A++D  ++ +   M 
Sbjct: 288 YKPAEADPIGYHGVPKFDPATSSLPKSKPGAATFSNVFGDWLCDMAKQDSKLMAITPAMR 347

Query: 430 MDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDV 489
               +  F +++PE+YFDV +AEQHAVT +AG AC GLKP   I S+FLQRAYDQ+++DV
Sbjct: 348 EGSGMVRFSKEYPEQYFDVAIAEQHAVTLAAGFACEGLKPVVAIYSSFLQRAYDQLIHDV 407

Query: 490 DQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASI 549
             Q LPV F I  AG+VG+DG T  GA+D++FM C+PNM++MAPSD +E   M+ T    
Sbjct: 408 ALQNLPVLFAIDRAGIVGADGETHQGAYDLSFMRCIPNMVIMAPSDTNECRHMLYTGYQA 467

Query: 550 DDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALL 609
            + PV  RYPRG+    D+       +E+GK  V+ +G  VA+L +G +++N     A L
Sbjct: 468 -NCPVAVRYPRGSAGSADIQSTMQ-QLEMGKANVIKKGTKVAILSFGTLLEN-----AQL 520

Query: 610 SKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLD 668
           +   ++ T+ + RF KPLD  L+ EL  +H  ++T+E+ +I GG GS V+ ++A    + 
Sbjct: 521 ATDELNATLVNMRFIKPLDTALIDELINDHDIIVTLEDNAIAGGAGSAVNEYLA---SIK 577

Query: 669 SGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
           + VK   + +PD +I+H +  Q     GL  H I  +  S +
Sbjct: 578 ADVKVLNLGIPDEFIKHGTQQQMHDEMGLGEHGILTSIKSFM 619


>gi|257058388|ref|YP_003136276.1| 1-deoxy-D-xylulose-5-phosphate synthase [Cyanothece sp. PCC 8802]
 gi|256588554|gb|ACU99440.1| deoxyxylulose-5-phosphate synthase [Cyanothece sp. PCC 8802]
          Length = 636

 Score =  441 bits (1133), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 251/642 (39%), Positives = 366/642 (57%), Gaps = 27/642 (4%)

Query: 85  VENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDK 144
           + +P +L  L+I++L+ +A +IR +    ++ T   L   L  VELT+AL+       DK
Sbjct: 6   ITHPNQLHGLSIRQLEDVARQIREKHLQTIAATGGHLGPGLGVVELTIALYQTLDLDRDK 65

Query: 145 ILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGM 204
           + WDVG Q Y HK+LTGR    HTLR+KDGI+GY  R ES++D F AGH   S+SA LGM
Sbjct: 66  VTWDVGHQAYPHKMLTGRYKNFHTLRQKDGIAGYLKRCESKFDHFGAGHASTSISAALGM 125

Query: 205 AVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPKIEES 263
           A+ARD +G+   +V VI +G    G A EA+++AG+L  +N++V+LND+  S+ P     
Sbjct: 126 ALARDAQGEDYKVVAVIGDGALTGGMALEAINHAGHLPHTNLMVVLNDNEMSISP----- 180

Query: 264 PKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRI---GRGMHEWAAKVDEYARGMIGPQ 320
              ++ A+S  L++++ S   + L +  +   K +   G  +     +V E  + +   +
Sbjct: 181 ---NVGAISRYLNKVRLSDPVQFLADNLEEQFKHLPFFGDSLSPEMERVKEGMKRLAVSK 237

Query: 321 GSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSEA 380
              + EELG  Y GP+DGHN+++LIS  ++   +   GPVLVHV T + +  E  +K + 
Sbjct: 238 VGAVIEELGFKYFGPIDGHNLQELISTFKQAHKV--TGPVLVHVATVKGKGYELAEKDQV 295

Query: 381 IEKQQE------GASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
               Q       G +  +S P      +Y   F   L   AE +  I+ + A M     L
Sbjct: 296 GYHAQSPFNLATGKAIPSSKP---KPPSYAKVFAHTLTTLAENNPKIIGITAAMATGTGL 352

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
              Q K P++Y DVG+AEQHAVT + GLAC G++P   I S FLQRAYDQV++DV  Q L
Sbjct: 353 DKLQAKLPKQYIDVGIAEQHAVTLAGGLACEGMRPVVAIYSTFLQRAYDQVLHDVCIQNL 412

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PV F +  AG+VG+DGPT  G +DI ++ C+PNM +MAP DE EL  M+ T  +  D P+
Sbjct: 413 PVFFCMDRAGIVGADGPTHQGMYDIAYLRCIPNMTIMAPKDEAELQRMIVTGVNYTDGPI 472

Query: 555 CFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGI 614
             RYPRG  +   L      P+ IGKG++L  G D+ +LGYG MV   L+A   L + GI
Sbjct: 473 AMRYPRGNGIGVPLMEEGWEPLPIGKGEILRNGDDLLILGYGTMVNTALQAAETLREHGI 532

Query: 615 DVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVKW 673
           + TV +ARF KPLD +L+  L Q    ++T+EEG + GGFGS V+   +   +L   V  
Sbjct: 533 EATVLNARFVKPLDTELILPLAQRIGKVVTLEEGCLMGGFGSAVAEAFSDHNVL---VPL 589

Query: 674 RPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTRE 715
           +   +PD  ++HA+P Q  A  GLT   IA   L +    R+
Sbjct: 590 KRFGVPDRLVDHATPDQSKADLGLTSPQIAEQILQVFFSNRQ 631


>gi|225849925|ref|YP_002730159.1| 1-deoxy-D-xylulose-5-phosphate synthase [Persephonella marina
           EX-H1]
 gi|225645401|gb|ACO03587.1| 1-deoxy-D-xylulose-5-phosphate synthase [Persephonella marina
           EX-H1]
          Length = 631

 Score =  441 bits (1133), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 245/620 (39%), Positives = 370/620 (59%), Gaps = 41/620 (6%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +LD VE+   LK L+ +ELK LA +IR  +  + SK    +  SL  VELT+AL   F+ 
Sbjct: 6   VLDRVEDFRDLKDLSEEELKLLAQDIREYIIDVTSKNGGHIGPSLGVVELTIALLRAFNP 65

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
            VD+I+WD+G Q Y++KILTGR+    TLR+  GISG+    ES YD F AGH   S+SA
Sbjct: 66  EVDRIIWDIGHQAYSYKILTGRKEQFKTLRQYGGISGFLKIKESPYDHFGAGHSSTSISA 125

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLD-SNMIVILNDSRHSLHPK 259
            LGM VA+D+  K    + VI +G   AGQA+E +++AG+LD S  IVILND++ S+ P 
Sbjct: 126 ALGMRVAKDLLKKEGYTIAVIGDGAMTAGQAFEGLNHAGWLDPSKFIVILNDNQMSISP- 184

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRI-GRGMHEWAAKVDEYARGMIG 318
                  ++ A+ +  ++I +++ +++ R+  K + K++ G    ++A K++EYA+G+  
Sbjct: 185 -------NVGAIYTYFNKIITNEVYQRSRQKLKDVLKKVFGESGAKFARKLEEYAKGLFT 237

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
           P    +FEELG  Y+G +DGH+I DL   L  V  +   GP+LVHV+         TQK 
Sbjct: 238 P--GVIFEELGFTYVGTIDGHSITDLEQTLNNVKKM--RGPILVHVI---------TQKG 284

Query: 379 EAIEKQQEGASDSNSL-PFGNYSR----------TYDDCFIEALVMEAEKDKDIVVVHAG 427
           +  +  +E  +  + + PF   +           ++   F EALV  AEKD+ IV +   
Sbjct: 285 KGYKPAEENPTPFHGISPFDKITGVPIKKSVEKPSWSKAFGEALVELAEKDEKIVAITPA 344

Query: 428 MEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVN 487
           M     L  F E+FP+R+FDVG+AEQHA TF+A L+  G+KP     S FLQRAYDQVV+
Sbjct: 345 MREGSGLTEFSERFPDRFFDVGIAEQHAATFAAALSKEGMKPVASFYSTFLQRAYDQVVH 404

Query: 488 DVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVA 547
           D+  Q LPV   I  AG+VG DGPT  G FDI+F+  +P++++ AP D  EL D++ T  
Sbjct: 405 DIAIQGLPVVLAIDRAGIVGEDGPTHHGVFDISFLRSVPDIVISAPKDWQELRDLLYTAV 464

Query: 548 SIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARA 607
           +   +    RYPRG +      G+    I+IG  + + EG+D+A+L  G  VQ  ++ + 
Sbjct: 465 N-SGKIFAIRYPRGTVTGDKKEGFS--EIKIGSWEKISEGRDIAILAVGKYVQRAVQVKE 521

Query: 608 LLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGL 666
           LL K G +VTV +ARF +P+DI+++ E  + H ++IT+E+GS+ GGFGS V  +I  +  
Sbjct: 522 LLKKYGYNVTVINARFIRPMDIEILDETLRTHKYIITMEDGSLNGGFGSAVGEYILDNSY 581

Query: 667 LDSGVKWRPIVLPDNYIEHA 686
            ++ +++    +PD +I H 
Sbjct: 582 TNALLRFG---IPDRFIGHG 598


>gi|315634195|ref|ZP_07889484.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter segnis
           ATCC 33393]
 gi|315477445|gb|EFU68188.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter segnis
           ATCC 33393]
          Length = 618

 Score =  441 bits (1133), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 250/616 (40%), Positives = 367/616 (59%), Gaps = 26/616 (4%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+L L+ +P  L+ L  ++L Q+  E+R  L   VS++   L S L  VELTVALH+VF 
Sbjct: 5   PLLSLINSPEDLRLLNKEQLPQVCRELREYLLESVSQSSGHLASGLGTVELTVALHYVFK 64

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG Q Y HKILTGRR  + T+R+K G+  +  R ESE+D  + GH   S+S
Sbjct: 65  TPFDQLIWDVGHQAYPHKILTGRRDQMSTIRQKGGLHPFPWRGESEFDVLSVGHSSTSIS 124

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           AGLG+A+A + +      V VI +G   AG A+EA+++AG L +NM+VILND+  S+   
Sbjct: 125 AGLGIAIAAERENAGRQTVCVIGDGAITAGMAFEALNHAGALHTNMLVILNDNEMSI--- 181

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                  ++ AL++ L+RI S   +  +R+ +K +  ++   +  +  K +E+ +G++  
Sbjct: 182 -----SENVGALNNHLARIFSGSFYSTVRDGSKKILDKVPT-VKNFMKKTEEHMKGVMFS 235

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             STLFEELG  YIGP+DGHNI++LI+ L  +  L   GP L+H+ T++  +     +++
Sbjct: 236 PESTLFEELGFNYIGPIDGHNIDELIATLSNMRDL--KGPQLLHIKTKKG-KGYTPAEND 292

Query: 380 AIEKQQEGASD--SNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLF 437
            I        D  S  LP  N + TY   F + L   AE+D  ++ +   M     +  F
Sbjct: 293 PIGFHGVPKFDHLSGQLPKSNATPTYSKIFGDWLCEMAERDPKLIGITPAMREGSGMVEF 352

Query: 438 QEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVR 497
            ++FP++YFDV +AEQHAVTF+AGLA GG KP   I S FLQRAYDQ+++DV  Q LPV 
Sbjct: 353 SQRFPQQYFDVAIAEQHAVTFAAGLAIGGYKPVVAIYSTFLQRAYDQLIHDVAIQDLPVL 412

Query: 498 FVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFR 557
           F I  AG+VG+DG T  GAFDI+FM C+PN+I+M PS+E+E   M+ T      +P   R
Sbjct: 413 FAIDRAGIVGADGQTHQGAFDISFMRCIPNLIIMTPSNENECRQMLYTGYHY-GKPAAVR 471

Query: 558 YPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVT 617
           YPRG  +   L   +  P+E+GK K + EGK VA+L +G ++ N     AL++   +D T
Sbjct: 472 YPRGNAMGVTLEPLQ--PLELGKSKHIREGKKVAILNFGTLLPN-----ALIAAEKLDAT 524

Query: 618 VADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVKWRPI 676
           V D RF KPLD+  + E+  +H  L+T+EE +I GG GS V+  +         VK   +
Sbjct: 525 VIDMRFVKPLDVTRINEIANSHELLVTLEENAIQGGAGSAVAEVLNQH---QHQVKLLQL 581

Query: 677 VLPDNYIEHASPTQQL 692
            LPD +I   S  + L
Sbjct: 582 GLPDFFIPQGSQAETL 597


>gi|358451416|ref|ZP_09161850.1| 1-deoxy-D-xylulose-5-phosphate synthase [Marinobacter manganoxydans
           MnI7-9]
 gi|357224649|gb|EHJ03180.1| 1-deoxy-D-xylulose-5-phosphate synthase [Marinobacter manganoxydans
           MnI7-9]
          Length = 643

 Score =  441 bits (1133), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 258/632 (40%), Positives = 375/632 (59%), Gaps = 43/632 (6%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD ++ P +L+ L  ++L +LA E+R+ L   V +T     + L  +ELTVALH+VF
Sbjct: 17  TPLLDRIDEPAQLRELAPEQLTRLARELRAFLLWSVGQTGGHFGAGLGVLELTVALHYVF 76

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+++WDVG Q Y HKILTGR+  + ++R+K G++G+  R+ESEYD F  GH   S+
Sbjct: 77  DTPSDRLVWDVGHQAYPHKILTGRKESMGSIRRKGGLAGFPKRAESEYDTFGVGHSSTSI 136

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LGMA+A  ++      + VI +G   AG A+EA+++AG+L ++M+VILND+  S+  
Sbjct: 137 SAALGMAIAARLQQTGRKSIAVIGDGAMTAGMAFEALNHAGHLHADMLVILNDNDMSI-- 194

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
                   ++  LS+  +++ SS+++ Q+R+ +K + +     M   A K +E+ +GMI 
Sbjct: 195 ------SRNVGGLSNYFAKLLSSRTYNQVRDSSKKVLQGAPHLM-ALAKKTEEHFKGMIA 247

Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR----RAED 374
           P   TLFEELG  YIGP+DGH++  L+  L+ +  L   GP  +HVVT + +       D
Sbjct: 248 P--GTLFEELGFNYIGPIDGHDLPLLVETLENIREL--EGPQFLHVVTTKGKGFAPAEAD 303

Query: 375 TQKSEAIEK-QQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
                AI K +    S    +        Y + F + L   AE+D+ +V +   M     
Sbjct: 304 PIGYHAINKIEPVPPSKPEPVKSKPKKPKYANVFGQWLCDSAEQDQRVVGITPAMCEGSD 363

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L  F ++FPERYFDV +AEQHAVT +AGLAC G KP   I S FLQRAYDQ+++DV  Q 
Sbjct: 364 LLAFSQRFPERYFDVAIAEQHAVTLAAGLACDGAKPVVAIYSTFLQRAYDQLIHDVAIQN 423

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           L V F I  AGLVG DGPT  GAFDI+++ C+PNM+VM PSDE+E   M+ T   + + P
Sbjct: 424 LDVLFAIDRAGLVGEDGPTHAGAFDISYLRCVPNMVVMTPSDENETRQMLQT-GMLYEGP 482

Query: 554 VCFRYPR----GAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALL 609
              RYPR    GA ++ +L      P+EIGKG+ +  GK VA+L +G ++   L+A    
Sbjct: 483 ASVRYPRGTGPGAEIQQEL-----TPLEIGKGRRIRNGKGVAILNFGTLLAPALEAAEA- 536

Query: 610 SKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLD 668
               I  TVAD RF KPLD +LV EL + H  L+T+EE +I GG GS V+ F      L+
Sbjct: 537 ----IGATVADMRFVKPLDEELVLELAEQHELLVTLEENAIAGGAGSAVTEF------LN 586

Query: 669 SGVKWRPIV---LPDNYIEHASPTQQLALAGL 697
           S +   P++   LPD +++H    + L   GL
Sbjct: 587 SRLVTLPVLQLGLPDTFMDHGKHGELLEECGL 618


>gi|399543830|ref|YP_006557138.1| 1-deoxy-D-xylulose-5-phosphate synthase [Marinobacter sp. BSs20148]
 gi|399159162|gb|AFP29725.1| 1-deoxy-D-xylulose-5-phosphate synthase [Marinobacter sp. BSs20148]
          Length = 654

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 257/653 (39%), Positives = 386/653 (59%), Gaps = 45/653 (6%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD + +P  ++ L   +L QLA E+RS L   V  T     + L  +ELTVALH+VF
Sbjct: 17  TPMLDRIGSPADIRQLPADQLTQLARELRSFLLWSVGTTGGHFGAGLGVLELTVALHYVF 76

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D+++WDVG Q Y HKILTGRR  + ++R+K+G++G+  R+ES YD F  GH   S+
Sbjct: 77  NTPEDRLVWDVGHQAYPHKILTGRREQMGSIRRKNGLAGFPKRTESPYDTFGVGHSSTSI 136

Query: 199 SAGLGMAVARDIKG-KRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLH 257
           SA LGMA+A + +G  R+CI  VI +G   AG A+EA+++AG+L ++M+VILND+  S+ 
Sbjct: 137 SAALGMAIASNQQGLTRKCIA-VIGDGAMTAGMAFEALNHAGHLKADMLVILNDNDMSI- 194

Query: 258 PKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMI 317
                    ++  LS+  +++ SS+++ Q+R+ +K + + I  G+ E A K +E+ +GMI
Sbjct: 195 -------SRNVGGLSNYFAKLLSSRTYHQMRDSSKKVLE-IAPGLRELAKKTEEHFKGMI 246

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQ- 376
            P   TLFEELG  YIGP+DGH++  L+  L+ +  L   GP  +H+VT + +     + 
Sbjct: 247 AP--GTLFEELGFNYIGPIDGHDLPLLVETLENIRELS--GPQFLHIVTTKGKGFAPAEA 302

Query: 377 ---------KSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAG 427
                    K E +    E + +   +  G  +  Y + F + L   A  D+ ++ +   
Sbjct: 303 DPIGYHAINKIEPLAATTESSGNPTPVKTGPAAPKYANVFGQWLCDAAAADERVMGITPA 362

Query: 428 MEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVN 487
           M     L  F E+FPERYFDV +AEQHAVT +AG+AC G KP   I S FLQR YDQ+++
Sbjct: 363 MCEGSDLLAFAERFPERYFDVAIAEQHAVTLAAGMACDGAKPVVAIYSTFLQRGYDQLIH 422

Query: 488 DVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVA 547
           DV  Q L V F I  AGLVG DGPT  GAFDI+++ C+PNM++M PSDE+E   ++ T  
Sbjct: 423 DVAIQNLDVLFAIDRAGLVGEDGPTHAGAFDISYLRCIPNMVLMTPSDENETRQLLHT-G 481

Query: 548 SIDDRPVCFRYPRGAIVRTDL-PGYRGIPIEIGKGKVLVEGKD----VALLGYGAMVQNC 602
            + + P   RYPRG+    ++ P    +P  +GKG+V+ E K     +A+L +G ++   
Sbjct: 482 LVHEGPAAVRYPRGSGSGAEIDPLLHTLP--MGKGRVVRERKSASGRIAILNFGTLL--- 536

Query: 603 LKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFI 661
              RAL +   +D TVAD RF KPLD  L+R+L + H  L+T+EE +I GG GS V  ++
Sbjct: 537 --PRALQAAQALDATVADMRFVKPLDEDLIRQLAEQHDLLVTLEENAIAGGAGSAVCEWL 594

Query: 662 ALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTR 714
             + +    ++   + LPD +++H S  Q L   GL     A    S+ GR +
Sbjct: 595 NQEEITMPVLQ---LGLPDKFVDHGSRDQLLEECGLDA---ATIERSITGRVQ 641


>gi|392307994|ref|ZP_10270528.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudoalteromonas citrea
           NCIMB 1889]
          Length = 621

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 249/643 (38%), Positives = 378/643 (58%), Gaps = 32/643 (4%)

Query: 74  WDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVA 133
           +D    P+L L E P +L+ L   +L   + E+R+ L   VS++     S L  VELTVA
Sbjct: 3   FDSSKYPMLALAEEPEQLRQLPQHKLPSFSKELRAYLLDSVSQSSGHFASGLGTVELTVA 62

Query: 134 LHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGH 193
           LH+V++ P D+++WDVG Q Y HKILTGRR  IHT+R+KDG+  +  R ES+YD F+ GH
Sbjct: 63  LHYVYNTPEDRLIWDVGHQAYPHKILTGRREQIHTIRQKDGLHPFPYREESQYDTFSVGH 122

Query: 194 GCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSR 253
              S+SA LGM++A   +G     V VI +G   AG A+EAM++AG + S+M++ILND+ 
Sbjct: 123 SSTSISAALGMSIAAKKEGLGRKTVAVIGDGAITAGMAFEAMNHAGDIKSDMLIILNDNE 182

Query: 254 HSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYA 313
            S+          ++ AL++  ++I S   +  +RE +K +   +   + E A+KV+E+ 
Sbjct: 183 MSI--------SENVGALTNHFAKILSGSFYTNIREGSKKLLSGV-PPVKELASKVEEHL 233

Query: 314 RGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAE 373
           +GM+ P   T FEELGL YIGP+DGH++  L+  L+ + +L   GP ++H+ T++ +  E
Sbjct: 234 KGMVIP--GTFFEELGLNYIGPIDGHDVNMLVDTLRNMRNL--KGPQILHIKTQKGKGYE 289

Query: 374 DTQKS----EAIEKQQEGASDSNSLPFGN-YSRTYDDCFIEALVMEAEKDKDIVVVHAGM 428
             +       A+ K        +SLP     + T+   F + L   A +D  ++ +   M
Sbjct: 290 PAEADPIGYHAVPKFDPSV---HSLPKSKPAAPTFSKVFGQWLCDMAAQDSRLMAITPAM 346

Query: 429 EMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVND 488
                +  F ++FPE+YFDV +AEQHAVT +AG AC  LKP   I S+FLQRAYDQ+++D
Sbjct: 347 REGSGMVQFSKQFPEQYFDVAIAEQHAVTLAAGFACENLKPVVAIYSSFLQRAYDQLIHD 406

Query: 489 VDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVAS 548
           V  Q LPV F I  AG+VG+DG T  GA+D++FM C+PNM++M PSD +E   M+ T  +
Sbjct: 407 VALQNLPVLFAIDRAGIVGADGETHQGAYDLSFMRCIPNMVIMTPSDTNECRKMLYTGFN 466

Query: 549 IDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARAL 608
             D+PV  RYPRG+    D+       + IGK   +  GK+VA+L +G ++ N     A 
Sbjct: 467 C-DQPVAVRYPRGSAGTADIEQVM-TDVAIGKANTIRVGKNVAILSFGTLLHN-----AQ 519

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLL 667
            +    + T+ D RF KP+D +L+ EL Q+HT  IT+E+ +I GG GS VS F+A    +
Sbjct: 520 CAADEFNTTLVDMRFVKPIDTQLLTELSQSHTHFITLEDNAIAGGAGSAVSEFLA---SI 576

Query: 668 DSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
           ++ V    + +PD +I+H +  +     GL+   I+     LL
Sbjct: 577 NASVHVSHLGIPDEFIKHGTQDEMHDEMGLSARGISDYVRQLL 619


>gi|124267816|ref|YP_001021820.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylibium petroleiphilum
           PM1]
 gi|171769840|sp|A2SJ46.1|DXS_METPP RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|124260591|gb|ABM95585.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Methylibium petroleiphilum
           PM1]
          Length = 631

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 267/653 (40%), Positives = 377/653 (57%), Gaps = 51/653 (7%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+L  ++ P  L+ L+  ELKQLA E+R  + + VS+T   L S+L  VELT+ALHHVF+
Sbjct: 5   PLLSTIDQPADLRGLSRAELKQLAQELRDHVLTSVSQTGGHLSSNLGTVELTIALHHVFN 64

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG QTY HKILTGRR  +  LR+  GISG+  R ESEYD F   H   S+S
Sbjct: 65  TPQDRLVWDVGHQTYPHKILTGRRDRMAGLRQLGGISGFPRRDESEYDTFGTAHSSTSIS 124

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           A LGMA+A  IKG+    V +I +G   AG A+EA++NAG   +NM+V+LND+  S+ P 
Sbjct: 125 AALGMALAAKIKGEDRRSVAIIGDGAMTAGMAFEALNNAGVSGANMLVVLNDNDMSISP- 183

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                   + AL+   +R+ S + +   R+ AK + K     + E A + +E+A+GMI P
Sbjct: 184 -------PVGALNRYFARLMSGRFYSAARQGAKSVLKN-APPLLELARRFEEHAKGMIVP 235

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             ST+FEE G  Y+GP+DGH+++ LI  L+ +      GP  +HVVT   ++    + +E
Sbjct: 236 --STIFEEFGFTYVGPIDGHDLDSLIPTLENLRD--RKGPQFLHVVT---KKGYGYKLAE 288

Query: 380 AIEKQQEGASDSNSLPFGNYSR------TYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
           A      G    N  P     +      ++   F + L   A KD  +V +   M     
Sbjct: 289 ADPVAYHGPGKFN--PAEGLKKAAPGKPSFTQVFGQWLCDMAAKDTRLVGITPAMREGSG 346

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           +  F+++FP+RYFDVG+AEQHAVTF+AGLAC GLKP   I S FLQR YDQ+++DV  Q 
Sbjct: 347 MVEFEQRFPDRYFDVGIAEQHAVTFAAGLACEGLKPVVAIYSTFLQRGYDQLIHDVAIQN 406

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPV F +  AG+VG+DG T  GA+DI ++ C+P++ ++AP+DE+E    + T A     P
Sbjct: 407 LPVVFALDRAGIVGADGATHAGAYDIAYVRCVPHLSLIAPADENECRQAL-TAAFEQQHP 465

Query: 554 VCFRYPRGAIVR-------TDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
           V  RYPRGA V        T LP  RG   E+ + +    G+ +A+L +G ++   L A 
Sbjct: 466 VAVRYPRGAGVGVAVQSELTALPWGRG---EL-RREARGGGRRIAILAFGTLLYPALAAA 521

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG 665
             L     D TVA+ RF KPLD +LV  L ++H  L+TVEEG + GG GS V     L+ 
Sbjct: 522 EKL-----DATVANMRFIKPLDTELVLSLARSHEALVTVEEGCLQGGAGSAV-----LEA 571

Query: 666 LLDSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTRE 715
           L  +GV   P++   LPD ++EH  P + LA  GL    I  + L   G   E
Sbjct: 572 LQAAGVNL-PVLTLGLPDEFVEHGDPAKLLAQLGLDAAGIEQSILKRFGAKLE 623


>gi|307249421|ref|ZP_07531412.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
 gi|306858563|gb|EFM90628.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
          Length = 617

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 253/624 (40%), Positives = 375/624 (60%), Gaps = 33/624 (5%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+L  + +P  L+ L  ++L+ +A E+R+ L   VS+T   L S L  VELTVALH+V+ 
Sbjct: 6   PLLSQINSPEDLRLLAKEQLQSVADELRAYLLESVSQTSGHLASGLGVVELTVALHYVYQ 65

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG Q Y HKILTGRR  +HT+R+K+GI  +  R ES YD  + GH   S+S
Sbjct: 66  TPFDQLIWDVGHQAYPHKILTGRRDQMHTIRQKNGIHPFPWREESLYDVLSVGHSSTSIS 125

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           AG+G+AVA + +      V VI +G   AG A+EAM++AG L ++M+VILND+  S+   
Sbjct: 126 AGVGIAVAAEKENAGRKTVCVIGDGAITAGMAFEAMNHAGALHTDMLVILNDNEMSI--- 182

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                  ++ AL++ L+RI S   +  +R+ +K +  ++   +  +  K +E+ +G+I P
Sbjct: 183 -----SENVGALNNHLARIFSGSIYTTVRDGSKKVLDKVPT-IKNFMKKSEEHMKGVISP 236

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
           + STLFEELG  YIGP+DGHNI++L+  L  +  L   GP  +H+ T++ +  E  + ++
Sbjct: 237 E-STLFEELGFNYIGPIDGHNIDELVKTLSNMREL--KGPQFLHIRTKKGKGYEPAE-ND 292

Query: 380 AIEKQQEGASDSN--SLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLF 437
            I        D +   LP      TY D F   L   AE+D  ++ +   M     +  F
Sbjct: 293 PIGYHGVPKFDPSCGQLPKSKTIPTYSDIFGNWLCEMAEQDSKLIGITPAMREGSGMVEF 352

Query: 438 QEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVR 497
            ++FPE+YFDV +AEQHAVTF AGLA  G KP   I S+FLQRAYDQ+++DV  Q LPV 
Sbjct: 353 SKRFPEQYFDVAIAEQHAVTFGAGLAIAGYKPVVAIYSSFLQRAYDQLIHDVAIQNLPVI 412

Query: 498 FVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFR 557
           F I  AG+VG+DG T  GAFD++FM C+PNM +M PSDE+E+  M+ T   + + P   R
Sbjct: 413 FAIDRAGIVGADGQTHQGAFDVSFMRCIPNMTIMCPSDENEMRQMLYTAYRM-NTPTAVR 471

Query: 558 YPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVT 617
           YPRG      L   +   +E+GKGK++ +G+ VA+L +G ++    +AR +  K   + T
Sbjct: 472 YPRGNAQGVALAPMQA--LEVGKGKLIQQGQKVAILNFGPLLN---EARIVAEKH--NYT 524

Query: 618 VADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVKWRPI 676
           +AD RF KPLD +LV EL  +H  L+ +EE +I GG GS V+ ++   G      K RP+
Sbjct: 525 LADMRFVKPLDEQLVAELADSHELLVALEENAIQGGAGSAVNEYLQKIG------KIRPL 578

Query: 677 VL---PDNYIEHASPTQQLALAGL 697
           V+   PD ++  A+  +  A  GL
Sbjct: 579 VMLGIPDFFVPQATQAEIYADLGL 602


>gi|188586311|ref|YP_001917856.1| 1-deoxy-D-xylulose-5-phosphate synthase [Natranaerobius
           thermophilus JW/NM-WN-LF]
 gi|229836068|sp|B2A526.1|DXS_NATTJ RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|179350998|gb|ACB85268.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Natranaerobius
           thermophilus JW/NM-WN-LF]
          Length = 631

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 258/642 (40%), Positives = 368/642 (57%), Gaps = 30/642 (4%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           T +L  +     LK L+ ++L +LA E+R  L S +S T   L  +L  VELT+A+H VF
Sbjct: 2   TKLLSYINTSEDLKHLSTEDLNKLAEELREFLISSISITGGHLAPNLGVVELTLAIHKVF 61

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
               DKI+WDVG Q+Y HKILTGR+    TLR+  G+SG+    ES YD F  GH   S+
Sbjct: 62  SPIQDKIVWDVGHQSYIHKILTGRKEQFSTLRQFGGLSGFPKPEESRYDAFGTGHSSTSI 121

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
           SA LGMA ARD++G  E ++ VI +G    G A+EAM++AG+  +NM VILND+  S+  
Sbjct: 122 SAALGMAKARDLQGSNEEVLAVIGDGAMTGGMAFEAMNHAGHEQANMTVILNDNEMSI-- 179

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKR---IGRGMHEWAAKVDEYARG 315
                  T++ ALSS LSR+++   + +++E  + + KR   IG  M +   +V +  + 
Sbjct: 180 ------GTNVGALSSYLSRLRTDPKYHRIKEDVEFLLKRIPAIGGKMMKSVERVKDSMKY 233

Query: 316 MIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDT 375
           ++      LFEELG  YIGP+DGHNI  L+ VL         GPVLVHV+T++ +  E  
Sbjct: 234 LM--VSGMLFEELGFTYIGPIDGHNIPQLMEVLNNAKD--KNGPVLVHVITKKGKGYEPA 289

Query: 376 QK------SEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGME 429
           +K           + + G +   +    +YS+ + D   E     A K++ +V + A M+
Sbjct: 290 EKFPDKFHGTGPFEIETGNAPKKAETAPSYSKVFGDTISEI----ARKNESVVAITAAMK 345

Query: 430 MDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDV 489
               L  F  +FPER+FDVG+AEQHA+TF+AGLA  G KP   I S FLQRAYDQ+++DV
Sbjct: 346 DGTGLTNFAREFPERFFDVGIAEQHAITFAAGLARKGFKPVVAIYSTFLQRAYDQIIHDV 405

Query: 490 DQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASI 549
             Q  PV F I  AG+VG DG T  G +D++++  +PN+IVMAP DE EL  M+ T  +I
Sbjct: 406 CMQDNPVIFAIDRAGIVGGDGETHQGLYDLSYLRSIPNLIVMAPKDEAELQRMLNTAVNI 465

Query: 550 DDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALL 609
            ++PV  RYPRG      L      PI + KG+ + EG  VA++G G MV + L+   +L
Sbjct: 466 -NKPVAIRYPRGKGEGVTL-WENMTPIPLYKGETIREGSQVAMIGVGKMVPDMLEVADML 523

Query: 610 SKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-IGGFGSHVSHFIALDGLLD 668
            K GI+ TV +ARF KPLD   + E+ Q H ++ T EE + +GGFGS V   ++  GL  
Sbjct: 524 KKEGIEPTVFNARFVKPLDESSILEIAQKHEYIYTFEENTELGGFGSQVLECLSKHGLAH 583

Query: 669 SGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
             +      LPD YI H   ++ L+   L    +    L+ L
Sbjct: 584 KLIDR--FCLPDEYIPHGDRSKVLSQYSLHSQELINKILNRL 623


>gi|325578413|ref|ZP_08148548.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus parainfluenzae
           ATCC 33392]
 gi|325160149|gb|EGC72278.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus parainfluenzae
           ATCC 33392]
          Length = 617

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 252/618 (40%), Positives = 364/618 (58%), Gaps = 26/618 (4%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+L L+ +P  L+ L   +L QL  E+RS L   VS+T   L S L  VELTVALH++F 
Sbjct: 5   PLLSLINSPEDLRLLNKDQLPQLCQELRSYLLESVSQTSGHLASGLGTVELTVALHYIFK 64

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG Q Y HKILTGRR  + T+R+K GI  +  R ESE+D  + GH   S+S
Sbjct: 65  TPFDQLIWDVGHQAYPHKILTGRRDQMSTIRQKGGIHPFPWREESEFDVLSVGHSSTSIS 124

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           AGLG+AVA + +      V VI +G   AG A+EA+++AG L ++M+VILND+  S+   
Sbjct: 125 AGLGIAVAAERENAGRKTVCVIGDGAITAGMAFEALNHAGSLHTDMLVILNDNEMSI--- 181

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                  ++ AL++ L+RI S   +  +R+ +K +  ++   +  +  K +E+ +G++  
Sbjct: 182 -----SENVGALNNHLARIFSGSLYSTVRDGSKKILDKVPT-VKNFMKKTEEHMKGVMFS 235

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             STLFEELG  YIGP+DGHNI++LI+ L  +  L   GP  +H+ T++ +  E  +K  
Sbjct: 236 PESTLFEELGFNYIGPIDGHNIDELIATLSNMRDL--KGPQFLHIKTKKGKGYEPAEKDP 293

Query: 380 -AIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQ 438
                  +    S  LP  N   TY   F + L   AE+D  +V +   M     +  F 
Sbjct: 294 IGFHGVPKFDPTSGQLPKSNAKPTYSKIFGDWLCEMAEQDDKLVGITPAMREGSGMVEFS 353

Query: 439 EKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRF 498
           E+FP++YFDV +AEQHAVTF+AGLA GG KP   I S FLQRAYDQ+++DV  Q LPV F
Sbjct: 354 ERFPQQYFDVAIAEQHAVTFAAGLAIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPVLF 413

Query: 499 VITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRY 558
            I  AG+VG+DG T  GAFD++FM C+PNMI+M PSDE+E   M+ T      +P   RY
Sbjct: 414 AIDRAGIVGADGQTHQGAFDLSFMRCIPNMIIMTPSDENECRQMLYTGYKC-GKPTAVRY 472

Query: 559 PRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTV 618
           PRG  +  +L       +EIG+ K++ +G+ +A+L +G ++   L     L     + TV
Sbjct: 473 PRGNAIGVELTPLA--ELEIGRSKMVRQGEKIAILNFGTLLPAALSVAEKL-----NATV 525

Query: 619 ADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVKWRPIV 677
            D RF KP+D   + E+   H F++T+EE +I GG GS VS  +   G   + ++   + 
Sbjct: 526 VDMRFVKPIDEARILEMADTHDFIVTLEENAIQGGAGSAVSEVLNSHGKTTALLQ---LG 582

Query: 678 LPDNYIEHASPTQQLALA 695
           LPD +I     TQQ ALA
Sbjct: 583 LPDIFIPQG--TQQEALA 598


>gi|402833940|ref|ZP_10882547.1| 1-deoxy-D-xylulose-5-phosphate synthase [Selenomonas sp. CM52]
 gi|402279009|gb|EJU28052.1| 1-deoxy-D-xylulose-5-phosphate synthase [Selenomonas sp. CM52]
          Length = 632

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 261/644 (40%), Positives = 364/644 (56%), Gaps = 27/644 (4%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L+ +  P  LKS T+ EL QLA E+R  +   VSKT   L  SL  VELT+ALH  F  
Sbjct: 4   LLERINEPHALKSCTLDELSQLARELRRYIIDTVSKTGGHLAPSLGTVELTLALHRAFDC 63

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P DKI+WDVG Q YAHKILTGRR     LR+K GI+G+  R ES YD F  GH   S+SA
Sbjct: 64  PEDKIVWDVGHQAYAHKILTGRREAFAGLRQKGGITGFPKREESVYDAFGTGHSSTSISA 123

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKI 260
            LGMA ARDI G+   I  VI +G    G+A+E ++NAG L  ++IVILND+  S+ P  
Sbjct: 124 ALGMAAARDIAGEHYRIAAVIGDGALTGGEAFEGLNNAGTLGKDIIVILNDNGMSIAP-- 181

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTK---RIGRGMHEWAAKVDEYARGMI 317
                 ++ A+S  LSR + +  + + ++  K   K    IG  ++  A  + +  R  +
Sbjct: 182 ------NVGAMSEYLSRFRVAPGYHRAKQDIKNFLKSIPHIGERVYRTAEHIKDGVRSAL 235

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQK 377
            P G  LF ++G +YIGP+DGHNI  L+ V ++   L   GP+L+HV T + +     +K
Sbjct: 236 VPGG--LFTDMGFHYIGPLDGHNIALLLDVFEQAKQL--KGPLLIHVETCKGKGYAPAEK 291

Query: 378 S----EAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
           +      I +     +D  +L       TY   F +AL+  AE+D D+V + A M     
Sbjct: 292 APDKFHGIGRFD--VADGTTLKKAGAKPTYTSVFGKALLEAAEEDADVVAITAAMPDGTG 349

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L+ F EK+P R+FDVG+AEQHA TF+AGLA  G KP   + S F QRAYDQ+++DV  Q 
Sbjct: 350 LRAFGEKYPTRFFDVGIAEQHATTFAAGLAAAGRKPVLALYSTFAQRAYDQILHDVCLQN 409

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           L V F +  AG VG DG T  G FD +++  LPNM V+AP DE+EL  M+ T  S++  P
Sbjct: 410 LHVVFALDRAGFVGEDGATHHGVFDYSYLRHLPNMKVLAPKDENELGRMLKTALSLEG-P 468

Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
           V  RYPRG  + T L      P+E    +VL E  ++ALL  G+MV    K   LL + G
Sbjct: 469 VALRYPRGEGLGTALE-EPFTPLESLAAEVLEEEGEIALLAVGSMVDAAQKTAKLLKEEG 527

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVK 672
           +   V + R  KPLD +L+  +      L+T+EE ++ GGFGS V   +A  GLL   V+
Sbjct: 528 LSAAVVNMRTVKPLDEELLHRMAHEKKMLVTMEENALAGGFGSAVLEALADAGLLVPVVR 587

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREA 716
           +    + D +IE   P + L +AGL    +A + L++    R+ 
Sbjct: 588 FG---IGDAFIEQGKPQELLEMAGLQPEQMARSILTVWKGARDG 628


>gi|332141879|ref|YP_004427617.1| 1-deoxy-D-xylulose-5-phosphate synthase [Alteromonas macleodii str.
           'Deep ecotype']
 gi|410862283|ref|YP_006977517.1| 1-deoxy-D-xylulose-5-phosphate synthase [Alteromonas macleodii
           AltDE1]
 gi|229807532|sp|B4RVY8.1|DXS_ALTMD RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|327551901|gb|AEA98619.1| 1-deoxy-D-xylulose-5-phosphate synthase [Alteromonas macleodii str.
           'Deep ecotype']
 gi|410819545|gb|AFV86162.1| 1-deoxy-D-xylulose-5-phosphate synthase [Alteromonas macleodii
           AltDE1]
          Length = 625

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 265/648 (40%), Positives = 379/648 (58%), Gaps = 37/648 (5%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           D +  P L L + P +L+ L   +L++LA E+R  L + VS+T     S L  VELTVAL
Sbjct: 4   DLQHYPTLALAQTPDKLRQLPQDKLRELADELREYLLNSVSQTSGHFASGLGTVELTVAL 63

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H+V++ P D++LWDVG Q Y HKILTGR   + T+R+K+G+  +    ESEYD F  GH 
Sbjct: 64  HYVYNTPFDRLLWDVGHQAYPHKILTGRAERMSTIRQKNGLHPFPWPPESEYDTFAVGHS 123

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SA LGMAVA + +GK   +V+VI +G   AG A+EA+++AG +  +M+V+LND+  
Sbjct: 124 STSISAALGMAVAAEKEGKDRKVVSVIGDGAMTAGMAFEALNHAGDIKKDMVVVLNDNEM 183

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+          ++ AL+S L+R+ +   F  +R+  K +   +   + E+A++ +E+ +
Sbjct: 184 SI--------SENVGALNSHLARLLTGNFFNSIRDGGKKLLSNV-PPIKEFASRAEEHLK 234

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---- 370
           GM+ P   T+FEELG  YIGP+DGH++  ++  L+ + +    GP L+HVVT++ +    
Sbjct: 235 GMVVP--GTIFEELGFNYIGPIDGHDVNAVVDTLRNMRNFD--GPQLLHVVTKKGKGYAV 290

Query: 371 RAEDTQKSEAIEKQQEGASDSNSLPFGNYSR-TYDDCFIEALVMEAEKDKDIVVVHAGME 429
             ED  K  A+ K        N+LP    S  TY   F + L   A +D  ++ V   M 
Sbjct: 291 AEEDPIKFHAVPKFNPA---DNALPKSKPSAPTYSAIFGQWLCDMAAQDPKLMAVTPAMR 347

Query: 430 MDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDV 489
               +  F ++FPE+YFDV +AEQHAVTF AGLA  G+     I S+FLQRAYDQ+++DV
Sbjct: 348 EGSGMVEFSQRFPEQYFDVAIAEQHAVTFGAGLAKDGMNAVVAIYSSFLQRAYDQLIHDV 407

Query: 490 DQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASI 549
             Q LPV F I  AG+VG+DGPT  GAFDI F+ C+PNM+VMAPSDE+E   M+ T   +
Sbjct: 408 AIQDLPVLFAIDRAGIVGADGPTHQGAFDIAFLRCIPNMVVMAPSDENECRQMLYTGHKL 467

Query: 550 DDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVE-GKD----VALLGYGAMVQNCLK 604
             +P   RYPRGA +    P      +EIGK +   E  KD    VA+L +G     CL 
Sbjct: 468 -QKPAAVRYPRGAGMGV-TPDEAMTALEIGKSRTCRETAKDKSESVAILNFG-----CLL 520

Query: 605 ARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIAL 663
             AL + + ID TV D RF KPLD   V +    H+ LIT+E+G I GG GS V   +  
Sbjct: 521 PYALEAAVAIDATVIDMRFIKPLDGDAVLKAANEHSALITLEDGCIMGGAGSAVLEHLQQ 580

Query: 664 DGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 711
           +G+L + VK   + LPD++I   +  +     GL    I A A SL+G
Sbjct: 581 NGVLKA-VKM--LGLPDSFILQGTQQEMYKEHGLDAEGIIAAAKSLIG 625


>gi|428222201|ref|YP_007106371.1| 1-deoxy-D-xylulose-5-phosphate synthase [Synechococcus sp. PCC
           7502]
 gi|427995541|gb|AFY74236.1| 1-deoxy-D-xylulose-5-phosphate synthase [Synechococcus sp. PCC
           7502]
          Length = 641

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 255/645 (39%), Positives = 371/645 (57%), Gaps = 40/645 (6%)

Query: 82  LDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAP 141
           L  + +P +L  L+I +L+ +A EIR++    ++ T   L   L  VELT+AL+      
Sbjct: 3   LSEITHPNQLHRLSIAQLESIAQEIRNKHLETIAATGGHLGPGLGVVELTLALYQTLDLD 62

Query: 142 VDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAG 201
            DK++WDVG Q Y HK++TGR    HTLR+KDG++GY  RSES++D F AGH   S+SA 
Sbjct: 63  HDKVVWDVGHQAYPHKLITGRYDRFHTLRQKDGVAGYLKRSESKFDHFGAGHASTSISAA 122

Query: 202 LGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPKI 260
           LGMA+ARD KG+    V +I +G    G A EA+++AG+L  +N++V+LND+        
Sbjct: 123 LGMAIARDAKGENFKTVAIIGDGALTGGMALEAINHAGHLPKTNLMVVLNDN-------- 174

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKR---IGRGMHEWAAKVDEYAR--G 315
           E S   ++ A+   L+R++ ++  + L    +   +    +G  + +   ++ +  +   
Sbjct: 175 EMSISANVGAIPRYLNRLRLTQPVKFLSGTIEEQVRNLPFVGGSLGDELDRIKDNIKILT 234

Query: 316 MIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVT--------- 366
           M+  +   +FEELG  YIGP+DGHN+++LI   Q    L   GPV+VHV T         
Sbjct: 235 MVQNKVGAVFEELGFTYIGPIDGHNLKELIDTFQMAHKL--QGPVMVHVATTKGKGYSYA 292

Query: 367 EENRRAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHA 426
           E +R     Q S  ++  +   S     P      +Y   F++ L+  AEKDK I+ + A
Sbjct: 293 EADRVGYHAQGSFNLDTGKSAPSSKPKPP------SYSKVFVDTLIKLAEKDKRIIGITA 346

Query: 427 GMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVV 486
            M     L   Q K PE+Y DVG+AEQHAVT +AGLAC G++P   I S FLQRA+DQ++
Sbjct: 347 AMATGTGLDKLQAKLPEQYIDVGIAEQHAVTLAAGLACEGMRPVAAIYSTFLQRAFDQII 406

Query: 487 NDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATV 546
           +DV  Q+L V F +  AG+VG+DGPT  G +DI ++ C+PN+++MAP DE EL  MV T 
Sbjct: 407 HDVCIQKLHVFFCLDRAGIVGADGPTHQGMYDIAYLRCIPNIVLMAPKDEAELQQMVVTG 466

Query: 547 ASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
              D   +  RYPRG      L      PI IGK +VL EGKDV L+ +G+MV   L+A 
Sbjct: 467 LEYDG-AIAMRYPRGNGYGVPLKSENWEPIPIGKAEVLREGKDVLLVAFGSMVYPALQAA 525

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG 665
            +L + G+  TV +ARF KPLD+ L+  L Q  + ++T+EEG + GGFGS V     L+ 
Sbjct: 526 EILMEHGVQATVVNARFAKPLDMDLIAPLAQTISRVVTLEEGCLMGGFGSAV-----LEA 580

Query: 666 LLDSG--VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALS 708
           L+D    V    I +PD  ++HASP Q  A  GLT   I+   L+
Sbjct: 581 LMDLQILVPVHRIGVPDVLVDHASPEQSFAELGLTSGQISDRILA 625


>gi|167627944|ref|YP_001678444.1| 1-deoxy-D-xylulose-5-phosphate synthase [Francisella philomiragia
           subsp. philomiragia ATCC 25017]
 gi|189027775|sp|B0U0B3.1|DXS_FRAP2 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|167597945|gb|ABZ87943.1| 1-deoxyxylulose-5-phosphate synthase [Francisella philomiragia
           subsp. philomiragia ATCC 25017]
          Length = 618

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 253/636 (39%), Positives = 368/636 (57%), Gaps = 25/636 (3%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           ILD +  P  LK +   +LK+LA E+R+ L   +  +     SSL A ELTVALH+VF+ 
Sbjct: 6   ILDKINTPSDLKLVPEGQLKELASELRTFLVDTLDVSGGHFASSLGATELTVALHYVFNT 65

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D I+WDVG QTY HKILTGR+  + T++K  GISG+  RSESEYD F  GH   S+SA
Sbjct: 66  PYDNIVWDVGHQTYIHKILTGRKDKLITIKKDGGISGFPKRSESEYDTFGVGHSSTSISA 125

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKI 260
            LGMA+A  ++GK    + VI +G    G A+EA+++AG +  +++VILND+        
Sbjct: 126 ALGMAIADRLQGKHSSSIAVIGDGAITGGMAFEALNHAGGIKEDILVILNDN-------- 177

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQ 320
           E S   ++  LS+  S+I S   +  +RE  K + K I   M E+  K++   +GM  P 
Sbjct: 178 EMSISDNVGGLSAHFSKIISGGFYNSIREKGKEVLKNI-PPMFEFVKKIETQTKGMFVP- 235

Query: 321 GSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSEA 380
            +  FE+LG YY+GP+DGHN+ +L+  L+ +      GP L+HV+T++ +     + S+ 
Sbjct: 236 -ANFFEDLGFYYVGPIDGHNVVELVKTLRILKD--HKGPKLLHVITKKGKGYTKAE-SDP 291

Query: 381 IEKQQEGASDSNSLPFGNYSR-TYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQE 439
           I+      S  +       S+ TY + F   +  +A KDK +V V   M+    L  F +
Sbjct: 292 IKFHHVAPSFHSGDAQSKASKPTYSNIFGNWICQKAAKDKRLVGVTPAMKEGSDLIRFSQ 351

Query: 440 KFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFV 499
           ++P RYFDV +AEQHAVTF+ GLAC GLKP   I S FLQRAYDQV++D+  Q L V + 
Sbjct: 352 QYPNRYFDVAIAEQHAVTFAGGLACQGLKPVVAIYSTFLQRAYDQVIHDIALQDLDVLYA 411

Query: 500 ITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYP 559
           +  AGLVG+DG T  G+FDI+FM C+PN ++M PSDE+E   M+         P   RYP
Sbjct: 412 VDRAGLVGADGATHDGSFDISFMRCIPNHVIMTPSDENETYHMLELGYEYKG-PAMVRYP 470

Query: 560 RGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVA 619
           RGA +  ++     + I++GK K++ +G  VA+L +G ++     A  L  K  I  TV 
Sbjct: 471 RGAGIGAEIT--DNLDIKLGKAKLVKKGSRVAILNFGTLLP---LANQLADKYHI--TVV 523

Query: 620 DARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVKWRPIVL 678
           D RF KPLD +++ ++CQNH  + T+EE SI GG GS V+ +I  +  L   +  R   L
Sbjct: 524 DMRFVKPLDEQMINQICQNHNIVFTLEESSIAGGAGSAVNEYIFAND-LSKNITVRNFGL 582

Query: 679 PDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTR 714
            D ++ H +    L  + L+ + IA     LL   +
Sbjct: 583 KDEFLTHGTKDLLLDYSNLSFNKIAEVLEKLLSHKK 618


>gi|402304803|ref|ZP_10823867.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus sputorum HK
           2154]
 gi|400377210|gb|EJP30090.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus sputorum HK
           2154]
          Length = 619

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 254/626 (40%), Positives = 371/626 (59%), Gaps = 38/626 (6%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+L  +++P  L+ L   +L+ LA E+R+ L   VS++   L S L  VELT+ALH+V+ 
Sbjct: 6   PLLSQIDSPEALRLLDKDQLQPLADELRAYLLKCVSQSSGHLASGLGVVELTIALHYVYQ 65

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG Q Y HKILTGRR  I T+R+KDGI  +  R ES YD  + GH   S+S
Sbjct: 66  TPFDQLIWDVGHQAYPHKILTGRRDQIKTIRQKDGIHPFPWREESVYDVLSVGHSSTSIS 125

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           AGLG+AVA   +      V VI +G   AG A+EA+++AG L ++M+VILND+  S+   
Sbjct: 126 AGLGIAVAAQKENAGRQTVCVIGDGAITAGMAFEALNHAGALHTDMLVILNDNEMSI--- 182

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                  ++ AL++ L++I S   +  +R+ +K +  ++   +  +  K +E+ +G+I P
Sbjct: 183 -----SENVGALNNHLAQIFSGSLYTTVRDGSKKVLDKVPSPIKNFMKKTEEHMKGVISP 237

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             STLFEELG  YIGPVDGHNIE+L+  L+ +  L   GP  +HV T   ++ +  Q +E
Sbjct: 238 V-STLFEELGFNYIGPVDGHNIEELVKTLKNMREL--KGPQFLHVRT---KKGKGYQPAE 291

Query: 380 AIEKQQEGASD----SNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQ 435
                  G       S  LP      TY D F + L   AE+D  ++ +   M     + 
Sbjct: 292 NDPIGYHGVPKFDPASGQLPKAKSIPTYSDIFGQWLCETAEQDTKLIGITPAMREGSGMV 351

Query: 436 LFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLP 495
            F ++FP +YFDV +AEQHAVTF+AGLA  G KP   I S+FLQRAYDQ+++DV  Q LP
Sbjct: 352 EFSKRFPAQYFDVAIAEQHAVTFAAGLAIAGYKPVVAIYSSFLQRAYDQLIHDVAIQNLP 411

Query: 496 VRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVC 555
           V F I  AG+VG+DG T  GAFD++F+ C+PNM +M PSDE+E+  M+ T   + + P  
Sbjct: 412 VIFAIDRAGIVGADGQTHQGAFDLSFIRCIPNMTIMTPSDENEMRQMLYTAYQM-NTPTA 470

Query: 556 FRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGID 615
            RYPRG      L   +   +EIGKGK++ +G+ VA+L +G  +    K    +++ G +
Sbjct: 471 VRYPRGNAKGVALEPMQS--LEIGKGKLIRQGEKVAILNFGTFLTEAQK----VAEAG-N 523

Query: 616 VTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVKWR 674
            T+ D RF KPLD  L++EL  +H  L+T+EE +I GG GS V+ ++   G      K +
Sbjct: 524 YTLVDMRFVKPLDEALIQELANSHDLLVTLEENAIQGGAGSAVNEYLQKIG------KIK 577

Query: 675 PIVL---PDNYIEHASPTQQLALAGL 697
           P+V+   PD +I  +  TQQ A   L
Sbjct: 578 PLVMLGIPDEFIPQS--TQQEAYEAL 601


>gi|377813360|ref|YP_005042609.1| deoxyxylulose-5-phosphate synthase [Burkholderia sp. YI23]
 gi|357938164|gb|AET91722.1| deoxyxylulose-5-phosphate synthase [Burkholderia sp. YI23]
          Length = 638

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 268/638 (42%), Positives = 374/638 (58%), Gaps = 54/638 (8%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L  +++P  L++L  ++L+ LA E+R+ +   VS+T   L S+L  VELT+ALH+VF  
Sbjct: 4   LLKTIDDPADLRALDRRQLQPLADELRAYVLDSVSQTGGHLSSNLGTVELTIALHYVFDT 63

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+I+WDVG QTY HKILTGRR  +  LR+  GISG+  R+ESEYD F   H   S+SA
Sbjct: 64  PNDRIVWDVGHQTYPHKILTGRREQMPGLRQLGGISGFPRRTESEYDTFGTAHSSTSISA 123

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDS-NMIVILNDSRHSLHPK 259
            LGMA+A  ++G     + VI +G   AG A+EAM+NAG  D   ++VILND+  S+ P 
Sbjct: 124 ALGMAIANKLQGDNRFSIAVIGDGAMTAGMAFEAMNNAGVADDVPLLVILNDNDMSISP- 182

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGR---GMHEWAAKVDEYARGM 316
                   + AL+  L+R+ S + +      A+   +R+ R    + + A K++E+A+GM
Sbjct: 183 -------PVGALNRHLARLMSGRFY----AAARAGVERVLRHAPPVLDLARKLEEHAKGM 231

Query: 317 IGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQ 376
           I P  +TLFEE G  YIGP+DGH+++ LI  LQ +  L   GP  +HVVT   ++ +  +
Sbjct: 232 IVP--ATLFEEFGFNYIGPIDGHDLDSLIPTLQNIKEL--RGPQFLHVVT---KKGQGYK 284

Query: 377 KSEAIEKQQEGASDSNSL----PFGNYS-RTYDDCFIEALVMEAEKDKDIVVVHAGMEMD 431
            +EA      G    N      P    S +TY   F E L   A  D  +V +   M   
Sbjct: 285 LAEADPVLYHGPGKFNPAEGIKPAATPSKKTYTQVFGEWLCDAAALDSRVVGITPAMREG 344

Query: 432 LSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQ 491
             +  F+++FP+RYFDVG+AEQHAVTF+ GLA  G+KP   I S FLQRAYDQ+++DV  
Sbjct: 345 SGMVEFEKRFPDRYFDVGIAEQHAVTFAGGLAADGMKPVVAIYSTFLQRAYDQLIHDVAL 404

Query: 492 QRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDD 551
           Q LPV F I  AGLVG+DG T  G +D+ F+ C+PNM VMA SDE+E   M+ T A    
Sbjct: 405 QNLPVVFAIDRAGLVGADGATHAGNYDLAFLRCIPNMTVMAASDENECRQMLYT-ALQQS 463

Query: 552 RPVCFRYPRGAIVRTDLPGYRGI-PIEIGKGKV-------LVEGKDVALLGYGAMVQNCL 603
            P   RYPRGA   T +   + +  I +GKG++       L  GK +A+  +G MV   L
Sbjct: 464 NPTAVRYPRGA--GTGVATVKQMTAIPVGKGEIRRESSQKLGSGKRIAICAFGTMVAPSL 521

Query: 604 KARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIA 662
            A   L     D+TVA+ RF KP+D  L+REL   H  ++T+EEGSI GG GS       
Sbjct: 522 AAAGEL-----DLTVANMRFVKPVDADLLRELAATHDAIVTIEEGSIMGGAGS-----AC 571

Query: 663 LDGLLDSGVKWRPIV---LPDNYIEHASPTQQLALAGL 697
           ++ LL SGV  +P++   LPD +I+H  P + LA  GL
Sbjct: 572 VEALLASGV-IKPVLQLGLPDVFIDHGDPGKLLASVGL 608


>gi|340361659|ref|ZP_08684076.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria macacae ATCC
           33926]
 gi|339888325|gb|EGQ77793.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria macacae ATCC
           33926]
          Length = 637

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 264/650 (40%), Positives = 367/650 (56%), Gaps = 61/650 (9%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD V +P  L+ L  K+L Q+A E+R  L   + KT     S+L AVELTVALH+V+
Sbjct: 4   TPLLDTVGSPQDLRRLDKKQLPQVAAELREFLLDSIGKTGGHFASNLGAVELTVALHYVY 63

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           H P DK++WDVG Q+Y HKILTGR+  +HT+R+  G++G+  RSESEYD F  GH   S+
Sbjct: 64  HTPEDKLVWDVGHQSYPHKILTGRKDQMHTMRRYGGLAGFPKRSESEYDAFGVGHSSTSI 123

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
            A LGMA A  + G     V +I +G   AGQA+EA++ AG +D N++VILND+  S+ P
Sbjct: 124 GAALGMAAADKLLGNDRRSVAIIGDGAMTAGQAFEALNCAGDMDVNLLVILNDNEMSISP 183

Query: 259 KIEESPK----TSINALSSTLSRI--QSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEY 312
            +   PK      +  +   LS I  QSSK   +L             G  E A KV+  
Sbjct: 184 NVGALPKYLASNVVRDMRGVLSTIKAQSSKVLDKL------------PGAMELAQKVEHK 231

Query: 313 ARGMIG-----PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTE 367
            + + G      Q  +LFE  G  Y GPVDGHN+E L+ VL+++   G  GP L+HV+T+
Sbjct: 232 IKTLAGEAEHAKQSLSLFENFGFRYTGPVDGHNVEHLVDVLKDLR--GRKGPQLLHVITK 289

Query: 368 EN---RRAE-DTQKSEAIEKQQEGASDSNSLPFGNYSR-------TYDDCFIEALVMEAE 416
           +    + AE D  K  A+    +  SD       +          TY   F + L  +A 
Sbjct: 290 KGNGYKLAENDPVKYHAVANLPKDVSDDLKTATSSEKENKPAAKPTYTQVFGKWLCDQAA 349

Query: 417 KDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSA 476
            D  +  +   M     L  F+++FP+RYFDVG+AEQHAVTF+ GLAC G+KP   I S 
Sbjct: 350 ADSRLAAITPAMREGSGLVEFEQQFPDRYFDVGIAEQHAVTFAGGLACEGMKPVVAIYST 409

Query: 477 FLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDE 536
           FLQR YDQ+V+D+  Q LPV F +  AG+VG+DGPT  G +D++F+ C+PNMI+ APSDE
Sbjct: 410 FLQRGYDQLVHDIALQNLPVLFAVDRAGIVGADGPTHAGLYDLSFLRCVPNMIIAAPSDE 469

Query: 537 DELVDMVATVASIDDRPVCFRYPR----GAIVRTDLPGYRGIPIEIGKGKVLVEGKDVAL 592
           +E   +++T     D P   RYPR    GA V  DL       + IGKG +  +G+  A 
Sbjct: 470 NECRLLLSTCYQA-DAPAAVRYPRGTGTGAPVSDDLE-----TVAIGKGVIRRQGEKTAF 523

Query: 593 LGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-IG 651
           + +G+MV   L   A+  KL  + TVAD RF KP+D +L+  L Q+H ++IT EE +  G
Sbjct: 524 IAFGSMVAPAL---AVAEKL--NATVADMRFVKPIDEELIVRLAQSHDYIITAEENAEQG 578

Query: 652 GFGSHVSHFIALDGLLDSGVKWRPIVL---PDNYIEHASPTQQLALAGLT 698
           G GS V   +A  G+       +P++L    D   EH  P + L   GL+
Sbjct: 579 GAGSAVLEVLAKHGIC------KPVLLLGVADTVTEHGDPKKLLDDLGLS 622


>gi|322515003|ref|ZP_08068013.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus ureae ATCC
           25976]
 gi|322118992|gb|EFX91164.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus ureae ATCC
           25976]
          Length = 626

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 253/623 (40%), Positives = 374/623 (60%), Gaps = 33/623 (5%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L  + +P  L+ L  ++L+ +A E+R+ L   VS+T   L S L  VELTVALH+V+  
Sbjct: 16  LLSQINSPEDLRLLAKEQLQPVADELRAYLLESVSQTSGHLASGLGVVELTVALHYVYQT 75

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+++WDVG Q Y HKILTGRR  +HT+R+K+GI  +  R ES YD  + GH   S+SA
Sbjct: 76  PFDQLIWDVGHQAYPHKILTGRRDQMHTIRQKNGIHPFPWREESLYDVLSVGHSSTSISA 135

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKI 260
           G+G+AVA + +      V VI +G   AG A+EAM++AG + ++M+VILND+  S+    
Sbjct: 136 GVGIAVAAEKENAGRKTVCVIGDGAITAGMAFEAMNHAGAMHTDMLVILNDNEMSI---- 191

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQ 320
                 ++ AL++ L+RI S   +  +R+ +K +  ++   +  +  K +E+ +G+I P+
Sbjct: 192 ----SENVGALNNHLARIFSGSIYTTVRDGSKKVLDKVPT-IKNFMKKSEEHMKGVISPE 246

Query: 321 GSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSEA 380
            STLFEELG  YIGPVDGHNI++L+  L  +  L   GP  +H+ T++ +  E  + ++ 
Sbjct: 247 -STLFEELGFNYIGPVDGHNIDELVKTLSNMREL--KGPQFLHIRTKKGKGYEPAE-NDP 302

Query: 381 IEKQQEGASD--SNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQ 438
           I        D     LP      TY D F   L   AE+D  ++ +   M     +  F 
Sbjct: 303 IGYHGVPKFDPIRGQLPKSKTIPTYSDIFGNWLCEMAEQDSKLIGITPAMREGSGMVEFS 362

Query: 439 EKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRF 498
           ++FPE+YFDV +AEQHAVTF AGLA  G KP   I S+FLQRAYDQ+++DV  Q LPV F
Sbjct: 363 KRFPEQYFDVAIAEQHAVTFGAGLAIAGYKPVVAIYSSFLQRAYDQLIHDVAIQNLPVIF 422

Query: 499 VITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRY 558
            I  AG+VG+DG T  GAFD++FM C+PNM +M PSDE+E+  M+ T   + + P   RY
Sbjct: 423 AIDRAGIVGADGQTHQGAFDVSFMRCIPNMTIMCPSDENEMRQMLYTAYRM-NTPTAVRY 481

Query: 559 PRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTV 618
           PRG      L   +   +E+GKGK++ +G+ VA+L +G ++    +AR +  K   + T+
Sbjct: 482 PRGNAQGVALEPMQA--LEVGKGKLIQQGQKVAILNFGPLLN---EARIVAEKH--NYTL 534

Query: 619 ADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVKWRPIV 677
            D RF KPLD +LV EL  +H  L+T+EE +I GG GS V+ ++   G      K RPIV
Sbjct: 535 IDMRFVKPLDEQLVAELADSHELLVTLEENAIQGGAGSFVNEYLQKIG------KIRPIV 588

Query: 678 L---PDNYIEHASPTQQLALAGL 697
           +   PD ++  A+ T+  +  GL
Sbjct: 589 MLGIPDFFVPQATQTESYSDLGL 611


>gi|284928885|ref|YP_003421407.1| 1-deoxy-D-xylulose-5-phosphate synthase [cyanobacterium UCYN-A]
 gi|284809344|gb|ADB95049.1| 1-deoxy-D-xylulose-5-phosphate synthase [cyanobacterium UCYN-A]
          Length = 636

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 251/630 (39%), Positives = 372/630 (59%), Gaps = 27/630 (4%)

Query: 87  NPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDKIL 146
           +P +L  L +++L+ +A +IR +    ++ +   L   L  VELTVAL+       DK++
Sbjct: 8   HPNQLHGLPVRQLEDVARQIREKHLQTIAASGGHLGPGLGVVELTVALYQTLDLDQDKVI 67

Query: 147 WDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAV 206
           WDVG Q Y HKILTGR +  HTLR+K+GI+GY  R ES +D F AGH   S+SAGLGMA+
Sbjct: 68  WDVGHQAYPHKILTGRYNNFHTLRQKNGIAGYLKRCESRFDHFGAGHASTSISAGLGMAI 127

Query: 207 ARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPKIEESPK 265
           ARD KG+   +V++I +G    G A EA+++AG+L +++++V+LND+  S+ P       
Sbjct: 128 ARDNKGENYKVVSIIGDGALTGGMALEAINHAGHLPNTSLMVVLNDNEMSISP------- 180

Query: 266 TSINALSSTLSRIQSSKSFRQLREVAKGMTKRI---GRGMHEWAAKVDEYARGMIGPQGS 322
            ++ A+S  L++++ S   + + +  +   K +   G  +     ++ E  + +  P+  
Sbjct: 181 -NVGAISRYLNKVRLSDPVQFISDNIEEQFKHLPFFGDSLTPEMERLREGVKRLAMPKVG 239

Query: 323 TLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSEAIE 382
            + EELG  Y GP+DGHNIE+LIS  ++     + GPV VHV T + +  E  +K +   
Sbjct: 240 AVIEELGFKYFGPIDGHNIEELISTFKQAHK--ATGPVFVHVSTVKGKGYEIAEKDQVGY 297

Query: 383 KQQEGAS--DSNSLPFGNYSR--TYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQ 438
             Q   S     ++P  N  +  +Y   F   L   A+ +  I+ + A M     L   Q
Sbjct: 298 HAQSPFSLATGKAIP-SNTPKPPSYSKVFAHTLTTLAQNNSKIIGITAAMATGTGLDKLQ 356

Query: 439 EKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRF 498
            K PE+Y DVG+AEQHAVT +AGLAC G++P   I S FLQRAYDQV++DV  Q LPV F
Sbjct: 357 AKLPEQYIDVGIAEQHAVTLAAGLACEGIRPLVAIYSTFLQRAYDQVLHDVAIQNLPVFF 416

Query: 499 VITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRY 558
            +  AG+VG+DGPT  G +DI+++ C+PNM +MAP DE EL  MV T  +    P+  R+
Sbjct: 417 CLDRAGIVGADGPTHQGLYDISYLRCIPNMTIMAPKDEAELQRMVVTGINHVSGPIAMRF 476

Query: 559 PRGAIVRTDL--PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDV 616
           PRG+ V   L   G+  IP  IGKG++L  G D+ L+ YG MV   L+   +L + GI+ 
Sbjct: 477 PRGSGVGVPLMEEGWESIP--IGKGEILRHGDDILLVAYGTMVNQSLQVAEILKEHGIEA 534

Query: 617 TVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVKWRP 675
           TV +ARF KPLDI L+  L ++   ++T+EEG + GGFGS V+  + +D  LD  V  + 
Sbjct: 535 TVINARFVKPLDIDLIAPLAKSIGKVVTLEEGCLMGGFGSAVTEAL-MD--LDVVVPIKR 591

Query: 676 IVLPDNYIEHASPTQQLALAGLTGHHIAAT 705
           I +PD  ++HA+P +  A   LT   IA T
Sbjct: 592 IGIPDQLVDHATPDESKAELELTSPQIAET 621


>gi|148263091|ref|YP_001229797.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter uraniireducens
           Rf4]
 gi|146396591|gb|ABQ25224.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter uraniireducens
           Rf4]
          Length = 637

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 266/641 (41%), Positives = 374/641 (58%), Gaps = 27/641 (4%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L+ + +P  LK L   +L  LA EIR  L   VSKT   L S+L  VELT+ALH+ F++
Sbjct: 4   LLNTINSPADLKKLKQDKLLILADEIREFLLETVSKTGGHLASNLGCVELTLALHYCFNS 63

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D I+WDVG Q Y HKI+TGRR    T R+  GISG+  RSES +D F AGH   S+SA
Sbjct: 64  PDDSIIWDVGHQAYTHKIITGRRDKFITQRQYHGISGFPKRSESMHDAFGAGHSSTSISA 123

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKI 260
           GLGMAVA  +K +   ++ VI +G+   G A+EA++ AG+L  N+IV+LND+        
Sbjct: 124 GLGMAVAHGLKEEASKVIAVIGDGSLTGGIAFEALNQAGHLHKNLIVVLNDN-------- 175

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKR---IGRGMHEWAAKVDEYARGMI 317
           E S   ++ ALS+ +SR  +   +R L++  +G+ K    IG  +  +A K +   +G +
Sbjct: 176 EMSISKNVGALSTFISRKLTGSYYRGLKKEMQGLLKNIPAIGGNILHFARKAENSLKGFL 235

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQK 377
            P   TLFE LG  YIGPV GH++  LI ++Q V +L   GPVLVHV+T + +  +  +K
Sbjct: 236 TP--GTLFEALGFEYIGPVQGHDLPQLIEIMQNVRAL--EGPVLVHVMTTKGKGYQPAEK 291

Query: 378 SEAIEKQQEGASDSNS---LPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
           +   +    G  D  +   +     +++Y   F E +V  A +DK I+ + A M     L
Sbjct: 292 TPD-KFHGVGPFDVKTGKVIAGKPGAQSYTGIFGETMVKLAAEDKKIIAITAAMPDGTGL 350

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F + +P+R+FDVG+AEQHA+TF+AG+A  G +P   I S F+QRAYDQV +D+  Q+L
Sbjct: 351 TPFAKAYPDRFFDVGIAEQHALTFAAGMATEGFRPVAAIYSTFVQRAYDQVFHDICLQKL 410

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PV   +  AGLVG DGPT  G FD++++  LP M VMAP DE+EL  M+ T A   DRP+
Sbjct: 411 PVTLALDRAGLVGDDGPTHHGVFDLSYLRHLPEMTVMAPKDENELQHMLKT-AIYSDRPI 469

Query: 555 CFRYPRGAIVRTDL-PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
             RYPRGA     +    + IP  IG G+ L EG D+ L+  G+ V   ++A  LL + G
Sbjct: 470 ALRYPRGAGYGVAMDESLQAIP--IGVGEQLAEGGDLTLVAIGSTVYPAMEAAELLKEKG 527

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVK 672
           I  TV +ARF KPLD  L+         +ITVEE ++ GGFGS V   +A +    +G++
Sbjct: 528 IRATVINARFVKPLDRNLILAAAGRTGCIITVEENAMQGGFGSAVLELLADEA---AGIR 584

Query: 673 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRT 713
            + I +PD YIE  S  Q      L    IA TA   LG+ 
Sbjct: 585 VKRIGVPDRYIEQGSQAQLRQDLRLDAAGIAQTAAEFLGKN 625


>gi|198283750|ref|YP_002220071.1| deoxyxylulose-5-phosphate synthase [Acidithiobacillus ferrooxidans
           ATCC 53993]
 gi|218665347|ref|YP_002426381.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidithiobacillus
           ferrooxidans ATCC 23270]
 gi|198248271|gb|ACH83864.1| deoxyxylulose-5-phosphate synthase [Acidithiobacillus ferrooxidans
           ATCC 53993]
 gi|218517560|gb|ACK78146.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidithiobacillus
           ferrooxidans ATCC 23270]
          Length = 624

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 262/639 (41%), Positives = 370/639 (57%), Gaps = 37/639 (5%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L  +  P  L+ ++  E K +A  +R  L   VS+T   L S L AVELTVALH VF+ 
Sbjct: 4   LLKSIPMPAELRQMSRSEQKNVAKAVRHFLLETVSRTGGHLSSCLGAVELTVALHAVFNT 63

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+++WDVG Q Y HKILTGR +    LR +DG+SG+  R ES YD F AGH   S+SA
Sbjct: 64  PDDRLVWDVGHQAYPHKILTGRGARFPQLRIRDGLSGFLKRDESPYDSFGAGHSSTSISA 123

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKI 260
           GLGMAVA  ++ K   +V +I +G   AG AYEA++N G LD++++V+LND+  S+ P  
Sbjct: 124 GLGMAVAARLEHKSRQVVAIIGDGAMTAGLAYEALNNGGVLDADLLVVLNDNEMSISP-- 181

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQ 320
                 ++ A+S  L+RI S + +  +RE A G        + E A K +E  +G++ P 
Sbjct: 182 ------NVGAVSRYLTRILSGRLYNTVREGA-GQALSFVPPLRELARKAEEGVKGLVTP- 233

Query: 321 GSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRR---AE-DTQ 376
              LFEE+G +Y GP+DGH+++ LI  L+ +  +   GP L+HV+T++ +    AE D  
Sbjct: 234 -GALFEEMGFHYFGPIDGHDLDALIPTLENLKKI--RGPRLLHVITKKGKGYGPAELDPC 290

Query: 377 KSEAIE--KQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
               +    + +G     S    +Y++ + D   E    +   +K +V +   M     L
Sbjct: 291 GYHGVTPFNRSDGRMAKKSAGAPSYTQVFGDWLCE----KGAAEKHLVAITPAMREGSGL 346

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
             F++ FPERYFDVG+AEQHAVTF+AGLAC G+ P   I S FLQRAYDQ+++DV  Q L
Sbjct: 347 VRFEQLFPERYFDVGIAEQHAVTFAAGLACDGIHPVVAIYSTFLQRAYDQLLHDVAIQNL 406

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PV F I  AGLVG+DG T  GAFDI +  C+PN+++MAP DE E+ DM+ T  +    P 
Sbjct: 407 PVLFAIDRAGLVGADGATHQGAFDIAYARCIPNLVIMAPKDEQEMRDMLNTGFAWQG-PA 465

Query: 555 CFRYPR--GAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
             RYPR  G  V  D    R IP  +GK ++L +GKD+A+L +G      + A   L   
Sbjct: 466 LVRYPRDNGLGVALDRDLSRQIP--VGKAEILRKGKDLAILAFGTRAAAAMAAGETL--- 520

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-IGGFGSHVSHFIALDGLLDSGV 671
             D TV + RF KPLD +L+  L Q H   +TVEEG+ +GG GS V+ F+  +G++   V
Sbjct: 521 --DATVVNMRFVKPLDTELLTSLAQTHRAFLTVEEGARMGGAGSAVAEFLLNEGVV---V 575

Query: 672 KWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 710
             R + LPD +IE     + LA  GL    I  +   LL
Sbjct: 576 PMRLLGLPDIFIEQGDAGRWLADLGLDAAGIEKSGRELL 614


>gi|349575615|ref|ZP_08887526.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria shayeganii 871]
 gi|348012883|gb|EGY51819.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria shayeganii 871]
          Length = 627

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 261/637 (40%), Positives = 374/637 (58%), Gaps = 38/637 (5%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD +++P  L+ L  ++L QLA E+R+ L   V +T     S+L AVELTVALH+V+
Sbjct: 4   TPLLDTIDSPQDLRRLREEQLPQLADELRTFLLESVGRTGGHFASNLGAVELTVALHYVY 63

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D ++WDVG Q+Y HKILTGR+  +HT+R+  G++G+  R+ESEYD F  GH   S+
Sbjct: 64  DTPHDHLVWDVGHQSYPHKILTGRKQRMHTIRQCGGLAGFPKRAESEYDDFGVGHSSTSI 123

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
            A LGMAVA  + G     V VI +G   AGQA+EA++NAG +D++++VILND+  S+ P
Sbjct: 124 GAALGMAVADRLSGSPRRSVAVIGDGAMTAGQAFEALNNAGAMDTDLLVILNDNEMSISP 183

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMI- 317
            +   PK     L+S + R     + R ++  ++ +  ++  G  + A +V+   R M+ 
Sbjct: 184 NVGALPKY----LASEVVR-DMRGALRSIKHKSEKVLDKL-PGALDIAQRVENRIRSMVD 237

Query: 318 ---GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR---- 370
              G Q S LF   GL Y GPVDGH++  L++VL+E+      GP L+HV+T + +    
Sbjct: 238 EVQGGQNS-LFNNFGLDYTGPVDGHDVRKLVAVLREMKQ--RKGPQLLHVLTRKGQGYPL 294

Query: 371 RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
              D     A+ K     ++  S P      +Y   F + L  +A  D  +V +   M  
Sbjct: 295 AENDPVGFHAVGKFNP--AEGPSKPAAPAKPSYTQIFGDWLHDQATADPKLVAITPAMRE 352

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L  F+++FPERYFDVG+AEQHAVTF+AGLAC G+KP   I S FLQRAYDQ+++DV 
Sbjct: 353 GSGLVAFEQQFPERYFDVGIAEQHAVTFAAGLACEGVKPVVAIYSTFLQRAYDQLIHDVA 412

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q LPV F I  AG+VG+DGPT  GA+D++++ C+PNM+V APSDE+E   +++T  ++ 
Sbjct: 413 LQNLPVLFAIDRAGIVGADGPTHAGAYDLSYLRCIPNMVVAAPSDENECRLLLSTCYAL- 471

Query: 551 DRPVCFRYPRGAIVRTDL-PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALL 609
            +P   RYPRG+     +  G   +P  +GKG V   G   A+L +G+MVQ  L A   L
Sbjct: 472 KQPAAVRYPRGSGCGAAVTSGLDTVP--LGKGIVRRRGHGTAVLAFGSMVQPALTAAETL 529

Query: 610 SKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLD 668
                ++TVAD RF KP+D  L+ EL Q H  L+ +EE ++ GG GS V   +A  GL  
Sbjct: 530 -----NLTVADMRFVKPIDEALIIELAQQHERLVCIEENAVQGGAGSAVLEVLAQHGLC- 583

Query: 669 SGVKWRPIVL---PDNYIEHASPTQQLALAGLTGHHI 702
                RP +L   PD   EH  P   L   GL+   I
Sbjct: 584 -----RPTLLLGIPDVVTEHGDPAVLLDDMGLSAGKI 615


>gi|332712209|ref|ZP_08432137.1| 1-deoxy-D-xylulose-5-phosphate synthase [Moorea producens 3L]
 gi|332349015|gb|EGJ28627.1| 1-deoxy-D-xylulose-5-phosphate synthase [Moorea producens 3L]
          Length = 635

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 251/636 (39%), Positives = 368/636 (57%), Gaps = 33/636 (5%)

Query: 82  LDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAP 141
           L  + +P +L  L+I++L+++A +IR +    ++ +   L   L  VELT+ L+      
Sbjct: 3   LSEITHPNQLHGLSIRQLEEIARQIREKHLQTIATSGGHLGPGLGVVELTLGLYQTLDLD 62

Query: 142 VDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAG 201
            DK++WDVG Q Y HK+LTGR +  HTLR+KDGI+GY  R E+++D F AGH   S+S+ 
Sbjct: 63  YDKVVWDVGHQAYPHKMLTGRYNRFHTLRQKDGIAGYLKRCENKFDHFGAGHASTSISSA 122

Query: 202 LGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPKI 260
           LGMA+ARD KG+   +  VI +G    G A EA+++AG+L  + ++V+LND+  S+ P +
Sbjct: 123 LGMALARDRKGQNFKVAAVIGDGALTGGMALEAINHAGHLPHTKLLVVLNDNEMSISPNV 182

Query: 261 EESPKTSINA--LSSTLSRIQSS--KSFRQLREVAKGMT---KRIGRGMHEWAAKVDEYA 313
              P+  +N   LS  +  I  +  + F+ L  V + ++   +R+  GM   A       
Sbjct: 183 GAIPRY-LNKVRLSEPMQFITDNLEEQFKNLPFVGESLSPDLQRLKEGMKRLAV------ 235

Query: 314 RGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAE 373
                P+   +FEELG  YIGPVDGHN+E+LIS       L   GPVLVHV T + +   
Sbjct: 236 -----PKVGAVFEELGFTYIGPVDGHNLEELISTFTNAHKLD--GPVLVHVATTKGKGYA 288

Query: 374 DTQKSEAIEKQQE--GASDSNSLPFGN-YSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
             +  +     Q     +   +LP        Y   F   LV  A+ +  I+ + A M  
Sbjct: 289 IAEADKVGYHAQSPFNLATGKALPAKKPKPPGYSKVFAHTLVTLAQNNPKIIGITAAMAT 348

Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
              L   QEK P++Y DVG+AEQHAVT +AGLAC G++P   I S FLQRAYDQ+++DV 
Sbjct: 349 GTGLNKLQEKLPDQYIDVGIAEQHAVTLAAGLACEGMRPVAAIYSTFLQRAYDQIIHDVC 408

Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
            Q LPV F +  AG+VG+DGPT  G +DI+++ C+PNM++MAP DE EL  MV T  +  
Sbjct: 409 IQNLPVFFCLDRAGIVGADGPTHQGMYDISYLRCIPNMVIMAPKDEAELQRMVVTGINHT 468

Query: 551 DRPVCFRYPRGAIVRTDL--PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARAL 608
           D P+  RYPRG+     L   G+  +P  IGK ++L  G D+ ++GYG MV   ++   +
Sbjct: 469 DGPIAMRYPRGSGYGVPLMEDGWEALP--IGKAELLRNGDDLLMVGYGTMVYTAMQTAEI 526

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLL 667
           LS+ GI+ TV +ARF KPLD +L+  L Q    ++T+EEG + GGFGS V+  +  + +L
Sbjct: 527 LSEHGIEATVINARFVKPLDTELIFPLAQKIGRVVTLEEGCLMGGFGSAVAEALMDNDIL 586

Query: 668 DSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIA 703
              V  +   +PD  ++HA P +  A  GLTG  IA
Sbjct: 587 ---VPLKRFGVPDQLVDHAKPDESKADLGLTGSQIA 619


>gi|261493236|ref|ZP_05989763.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mannheimia haemolytica
           serotype A2 str. BOVINE]
 gi|261496521|ref|ZP_05992901.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mannheimia haemolytica
           serotype A2 str. OVINE]
 gi|261307724|gb|EEY09047.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mannheimia haemolytica
           serotype A2 str. OVINE]
 gi|261311086|gb|EEY12262.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mannheimia haemolytica
           serotype A2 str. BOVINE]
          Length = 617

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 251/633 (39%), Positives = 377/633 (59%), Gaps = 36/633 (5%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+L  + +P  L+ L+  +L+ +  E+R+ L   VS+T   L S L  VELTVALH+V+ 
Sbjct: 6   PLLSEINSPEDLRLLSKDQLQTVVDELRAYLLESVSQTSGHLASGLGVVELTVALHYVYQ 65

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG Q Y HKILTGRR  +HT+R+KDGI  +  R ES YD  + GH   S+S
Sbjct: 66  TPFDQLIWDVGHQAYPHKILTGRRDQMHTIRQKDGIHPFPWREESPYDVLSVGHSSTSIS 125

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           AGLG+AVA + +      V VI +G   AG A+EA+++AG L ++M+VILND+  S+   
Sbjct: 126 AGLGIAVAAEKENAGRKTVCVIGDGAITAGMAFEALNHAGALHTDMLVILNDNEMSI--- 182

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                  ++ AL++ L+RI S   +  +R+ +K +  ++   +  +  K +E+ +G+I  
Sbjct: 183 -----SENVGALNNHLARIFSGSLYTSVRDGSKKILDKVPT-IKNFMKKSEEHMKGVIFS 236

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR----RAEDT 375
             STLFEELG  YIGP+DGHNI++L+  L  +  L   GP  +H+ T++ +       D 
Sbjct: 237 PESTLFEELGFNYIGPIDGHNIDELVKTLSNMREL--KGPQFLHIRTKKGKGYTPAENDP 294

Query: 376 QKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQ 435
                + K    A++   LP    + TY + F + L   AE+D  I+ +   M     + 
Sbjct: 295 IGYHGVPKFDPTAAE---LPKSKAAPTYSNIFGDWLCEMAERDPKIIGITPAMREGSGMV 351

Query: 436 LFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLP 495
            F ++FPE+YFDV +AEQHAVTF AGLA  G KP   I S+FLQRAYDQ+++DV  Q LP
Sbjct: 352 EFSKRFPEQYFDVAIAEQHAVTFGAGLAIAGYKPVVAIYSSFLQRAYDQLIHDVAIQNLP 411

Query: 496 VRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVC 555
           V F I  AG+VG+DG T  GAFD++FM C+PNM +MAPSDE+E+  M+ T  ++ + P  
Sbjct: 412 VIFAIDRAGIVGADGQTHQGAFDLSFMRCIPNMTIMAPSDENEMRQMLYTAYTM-NTPSA 470

Query: 556 FRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGID 615
            RYPRG      L   +G  +E+GK  ++ EGK VA+L +GA++    +A+ +  K   +
Sbjct: 471 IRYPRGNAKGVKLEPMQG--LEVGKANIIREGKKVAILNFGALLD---EAKIVAEKH--N 523

Query: 616 VTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVKWR 674
            T+ D RF KPLD  L++++  +H  L+T+EE +I GG GS V+ ++   G      K +
Sbjct: 524 YTLVDMRFIKPLDEALLQKVADSHELLVTLEENAIQGGAGSFVNEYLQNIG------KIK 577

Query: 675 PIVL---PDNYIEHASPTQQLALAGLTGHHIAA 704
           P+V+   PD ++  ++  +  A  GL    I A
Sbjct: 578 PLVMLGIPDFFVPQSTQAEAYADLGLDAQGIEA 610


>gi|333985124|ref|YP_004514334.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylomonas methanica
           MC09]
 gi|333809165|gb|AEG01835.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylomonas methanica
           MC09]
          Length = 620

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 252/634 (39%), Positives = 373/634 (58%), Gaps = 35/634 (5%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+L  + +P  +++L   +LK LA E+R  L+  VS +     + L  VELTVALH+VF+
Sbjct: 8   PLLHTIHSPADIRALPKDQLKPLADEVREYLTHTVSISGGHFSAGLGTVELTVALHYVFN 67

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG Q Y HKILTGR+  + T+R   G+S + SR ESEYD F  GH   S+S
Sbjct: 68  TPEDQLVWDVGHQAYPHKILTGRKDRMQTIRTLGGVSAFPSRDESEYDAFGVGHSSTSIS 127

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           A LGMA+A  ++G+ + +V +I +G+   G AYEAM++AG +++N++VILND+  S+ P 
Sbjct: 128 AALGMAIASQLRGEDKKMVAIIGDGSITGGMAYEAMNHAGDVNANLLVILNDNDMSISPP 187

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                   + A+++ L+++ SSK +  +RE +K     +   + E A K +E+ +GMI P
Sbjct: 188 --------VGAMNNYLTKVLSSKLYSSVREESKKALASM-PSVWELARKTEEHVKGMIVP 238

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
              TLFEELG  Y GP+DGH++  L+S L+++  +   GPV +HVVT++ +     +K  
Sbjct: 239 --GTLFEELGFNYFGPIDGHDVAMLVSTLEKLKDIS--GPVFLHVVTKKGKGYAPAEKDP 294

Query: 380 -AIEKQQEGASDSNSLPFGNYS--RTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQL 436
            A           +SLP    S   TY + F   L   A +D+ ++ +   M     L  
Sbjct: 295 LAYHGVPAFDPSKDSLPKSAPSPHPTYTEVFGNWLCDMAAQDERLLGITPAMREGSGLVK 354

Query: 437 FQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPV 496
           F ++FP+RYFDV +AEQHAVT +AG AC G KP   I S FLQRAYDQ+++DV  Q+L V
Sbjct: 355 FSQQFPKRYFDVAIAEQHAVTLAAGQACQGAKPVVAIYSTFLQRAYDQLIHDVALQKLDV 414

Query: 497 RFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCF 556
            F +  AGLVG DGPT  G++D ++M C+PNM+VMAP+DE+E   M+ T    +  P   
Sbjct: 415 LFALDRAGLVGPDGPTHAGSYDFSYMRCIPNMLVMAPADENECRQMLTTGYQYNG-PASV 473

Query: 557 RYPR----GAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 612
           RYPR    GA V +DL       + IGK ++  +G  +A+L +G+MV   ++A   L   
Sbjct: 474 RYPRGKGPGASVDSDL-----TALAIGKAEIRHQGGRIAILAWGSMVTPAVEAGKQLG-- 526

Query: 613 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGV 671
               TV + RF KP D  LV E+ ++H   +TVEE  I GG GS ++ F+    +L   +
Sbjct: 527 ---ATVVNMRFVKPFDEALVLEMAKSHDSFVTVEENVIAGGAGSAINEFLQAQRILMPAL 583

Query: 672 KWRPIVLPDNYIEHASPTQQLALAGLTGHHIAAT 705
               I LPD ++E  S  + L+L GL    I A+
Sbjct: 584 N---IGLPDRFVEQGSREELLSLCGLDTKGILAS 614


>gi|15606220|ref|NP_213598.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aquifex aeolicus VF5]
 gi|8134411|sp|O67036.1|DXS_AQUAE RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|2983421|gb|AAC07004.1| hypothetical protein aq_881 [Aquifex aeolicus VF5]
          Length = 628

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 255/635 (40%), Positives = 363/635 (57%), Gaps = 32/635 (5%)

Query: 77  EPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHH 136
           E   IL   + P  +K+   + L++LA E+R  + ++ SK    +  SL  VELT+AL  
Sbjct: 3   EKYEILKDYKGPFDIKNYDYETLQKLAQEVRDYIINVTSKNGGHVGPSLGVVELTIALLR 62

Query: 137 VFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCN 196
           VF+ P D I+WD+G Q Y  KILT R+    TLR+  GISG+  R ES YD F AGH   
Sbjct: 63  VFNPPEDVIVWDIGHQGYPWKILTDRKEQFPTLRQYKGISGFLRREESIYDAFGAGHSST 122

Query: 197 SVSAGLGMAVARDIKGKRE-CIVTVISNGTTMAGQAYEAMSNAGYLDSN-MIVILNDSRH 254
           S+SA LG  + +D+KG++E  ++ VI +G   AG AYEA++NAG++  +  IVILND+  
Sbjct: 123 SISAALGFRIGKDLKGEKEDYVIAVIGDGALTAGMAYEALNNAGHIRPDRFIVILNDNEM 182

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+ P        ++ A+S+ L+RI S    ++ R+  K   +  G          +E+ +
Sbjct: 183 SISP--------NVGAISTYLNRIISGHFVQETRQKIKNFLQHFGETPLRIMKLTEEFLK 234

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAED 374
           G+I P    +FEELG  YIGP+DGH+I+ L   L  V  +   GPVL+HV T++ +  + 
Sbjct: 235 GLISP--GVIFEELGFNYIGPIDGHDIKALEDTLNNVKDI--KGPVLLHVYTKKGKGYKP 290

Query: 375 TQKSE------AIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGM 428
            +++       A  K + G     S P      T+   F +ALV  AE+D+ IV +   M
Sbjct: 291 AEENPVKWHGVAPYKVESGEIIKKSSP-----PTWTSVFGKALVELAERDEKIVAITPAM 345

Query: 429 EMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVND 488
                L  F ++FP+R+FDVG+AEQHA TF+AGLA  GL+P     S FLQRAYDQV++D
Sbjct: 346 REGSGLVEFAKRFPDRFFDVGIAEQHACTFAAGLAAEGLRPVAAYYSTFLQRAYDQVIHD 405

Query: 489 VDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVAS 548
           V  Q LPV F I  AGLVG DGPT  G FD++++ C+PNM+V AP DE EL D++ T   
Sbjct: 406 VALQNLPVTFAIDRAGLVGDDGPTHHGVFDLSYLRCVPNMVVCAPKDEQELRDLLYT-GI 464

Query: 549 IDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARAL 608
              +P   RYPRGA       G++   IEIG  + L+EG+D  +L  G  V   L+A   
Sbjct: 465 YSGKPFALRYPRGAAYGVPTEGFK--KIEIGTWEELLEGEDCVILAVGYPVYQALRAAEK 522

Query: 609 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-IGGFGSHVSHFIALDGLL 667
           L K GI V V +ARF KP+D K++R+L   +   ITVE+ + +GGFGS V  F A +G++
Sbjct: 523 LYKEGIRVGVVNARFVKPMDEKMLRDLANRYDTFITVEDNTVVGGFGSGVLEFFAREGIM 582

Query: 668 DSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHI 702
              +    + +PD +IEH        L G+    I
Sbjct: 583 KRVIN---LGVPDRFIEHGKQDILRNLVGIDAEGI 614


>gi|85859631|ref|YP_461833.1| 1-deoxy-D-xylulose-5-phosphate synthase [Syntrophus aciditrophicus
           SB]
 gi|118595622|sp|Q2LUA7.1|DXS_SYNAS RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|85722722|gb|ABC77665.1| 1-deoxy-D-xylulose 5-phosphate synthase [Syntrophus aciditrophicus
           SB]
          Length = 650

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 253/657 (38%), Positives = 387/657 (58%), Gaps = 40/657 (6%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           IL  ++ P  ++ L I +L  LA +IRS +   VS+T   L SSL  VELT+A+H VF  
Sbjct: 17  ILSRIQFPEDIRMLDIGDLTLLASDIRSAIIETVSRTGGHLASSLGTVELTLAVHKVFDT 76

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+++WDVG Q YAHK++TGRR +  TLR+K GISG+  R ES YD FN GH   S+SA
Sbjct: 77  PKDRVIWDVGHQAYAHKLITGRRDVFSTLRQKGGISGFPKREESPYDVFNVGHSSTSISA 136

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKI 260
             G+A ARD+K +R  +V +I +G+  AG A+E ++ +G    ++++ILND+  S+ P  
Sbjct: 137 ASGIAEARDLKKERFKVVAIIGDGSMTAGLAFEGLNWSGDRKKDLVIILNDNEMSISP-- 194

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTK---RIGRGMHEWAAKVDEYARGMI 317
                 ++ ALSS L+ I + ++  ++R+  +   K    IG  + E++ + +E  + +I
Sbjct: 195 ------NVGALSSYLNHIMTGQTANKIRKDIRNFLKTIPSIGEQVLEFSRRAEESLKALI 248

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQK 377
            P    LFE+LG  Y+GP++GH ++ LI  L++V ++   GPVLVHV+T   R+ +  + 
Sbjct: 249 VP--GALFEDLGFTYVGPLEGHRLDHLIRNLEDVRNM--EGPVLVHVIT---RKGKGYKF 301

Query: 378 SEA------------IEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVH 425
           +EA             E  +  A+  + +P      +Y   F   +V  A ++  +V + 
Sbjct: 302 AEAEPLRFHGICPFSPETGKPAAASESPVP-----PSYTQVFGNTIVKLARQNPRLVAIT 356

Query: 426 AGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQV 485
           A M     L  F E+FPER+FDVG+AEQH+VTF+AGLA  G+ P   I S+FLQRAYDQ+
Sbjct: 357 AAMCEGTGLNAFAEEFPERFFDVGIAEQHSVTFAAGLATEGILPVVAIYSSFLQRAYDQI 416

Query: 486 VNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVAT 545
           ++DV  Q LPV F +  AG VG DGPT  G FD++++  +PNM+VMAP DE+EL  M+ T
Sbjct: 417 LHDVCLQNLPVVFALDRAGFVGEDGPTHHGLFDLSYLRSIPNMVVMAPKDENELQHMLHT 476

Query: 546 VASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKA 605
             +   +P   RYPRG+ V   +   +   +E+GKG+VL EG  +A+L  G  V   L A
Sbjct: 477 AVAC-GKPAAVRYPRGSGVGVTMDS-QPFSLELGKGEVLCEGGSLAILAVGDPVHPALTA 534

Query: 606 RALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALD 664
              L + GI  TV +ARF KPLD +L+  + ++   ++TVEE  + GGFGS +  F+  +
Sbjct: 535 AVQLREEGIYATVVNARFVKPLDRELLLRIVRSFKKILTVEENVLTGGFGSAILEFLEEN 594

Query: 665 GLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLLMC 721
            +   G++ + + + D + E A+  +Q  L G+    IAA   S++   R + +  C
Sbjct: 595 DI--HGIQVKRLGIRDEFAEQATQAEQRRLYGIDEQGIAAAVRSMMNMGRSSQMEAC 649


>gi|254362650|ref|ZP_04978737.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mannheimia haemolytica
           PHL213]
 gi|452745878|ref|ZP_21945710.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mannheimia haemolytica
           serotype 6 str. H23]
 gi|153094269|gb|EDN75133.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mannheimia haemolytica
           PHL213]
 gi|452086017|gb|EME02408.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mannheimia haemolytica
           serotype 6 str. H23]
          Length = 617

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 253/634 (39%), Positives = 378/634 (59%), Gaps = 38/634 (5%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+L  + +P  L+ L+  +L+ +  E+R+ L   VS+T   L S L  VELTVALH+V+ 
Sbjct: 6   PLLSEINSPEDLRLLSKDQLQTVVDELRAYLLESVSQTSGHLASGLGVVELTVALHYVYQ 65

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG Q Y HKILTGRR  +HT+R+KDGI  +  R ES YD  + GH   S+S
Sbjct: 66  TPFDQLIWDVGHQAYPHKILTGRRDQMHTIRQKDGIHPFPWREESPYDVLSVGHSSTSIS 125

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           AGLG+AVA + +      V VI +G   AG A+EA+++AG L ++M+VILND+  S+   
Sbjct: 126 AGLGIAVAAEKENAGRKTVCVIGDGAITAGMAFEALNHAGALHTDMLVILNDNEMSI--- 182

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                  ++ AL++ L+RI S   +  +R+ +K +  ++   +  +  K +E+ +G+I  
Sbjct: 183 -----SENVGALNNHLARIFSGSLYTSVRDGSKKILDKVPT-IKNFMKKSEEHMKGVIFS 236

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR----RAEDT 375
             STLFEELG  YIGP+DGHNI++L+  L  +  L   GP  +H+ T++ +       D 
Sbjct: 237 PESTLFEELGFNYIGPIDGHNIDELVKTLSNMREL--KGPQFLHIRTKKGKGYTPAENDP 294

Query: 376 QKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQ 435
                + K    A++   LP    + TY + F + L   AE+D  I+ +   M     + 
Sbjct: 295 IGYHGVPKFDPTAAE---LPKSKAAPTYSNIFGDWLCEMAERDPKIIGITPAMREGSGMV 351

Query: 436 LFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLP 495
            F ++FPE+YFDV +AEQHAVTF AGLA  G KP   I S+FLQRAYDQ+++DV  Q LP
Sbjct: 352 EFSKRFPEQYFDVAIAEQHAVTFGAGLAIAGYKPVVAIYSSFLQRAYDQLIHDVAIQNLP 411

Query: 496 VRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVC 555
           V F I  AG+VG+DG T  GAFD++FM C+PNM +MAPSDE+E+  M+ T  ++ + P  
Sbjct: 412 VIFAIDRAGIVGADGQTHQGAFDLSFMRCIPNMTIMAPSDENEMRKMLYTAYTM-NTPSA 470

Query: 556 FRYPRGAIVRTDL-PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGI 614
            RYPRG      L P  R   +E+GKG ++ EGK VA+L +GA++    +A+ +  K   
Sbjct: 471 IRYPRGNAKGVKLEPMQR---LEVGKGNIIREGKKVAILNFGALLD---EAKIVAEKH-- 522

Query: 615 DVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVKW 673
           + T+ D RF KPLD  L++++  +H  L+T+EE +I GG GS V+ ++   G      K 
Sbjct: 523 NYTLVDMRFIKPLDEALLQKVADSHELLVTLEENAIQGGAGSFVNEYLQNIG------KI 576

Query: 674 RPIVL---PDNYIEHASPTQQLALAGLTGHHIAA 704
           +P+V+   PD ++  ++  +  A  GL    I A
Sbjct: 577 KPLVMLGIPDFFVPQSTQAEAYADLGLDAQGIEA 610


>gi|406997883|gb|EKE15887.1| hypothetical protein ACD_11C00090G0012 [uncultured bacterium]
          Length = 619

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 247/627 (39%), Positives = 368/627 (58%), Gaps = 30/627 (4%)

Query: 76  KEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALH 135
           K    +LDLV  P  +K+L+ ++L Q   E+R  L   V++T     S+L  VELTVALH
Sbjct: 3   KNNQKLLDLVNFPQDVKNLSQEKLPQFCGELREFLIESVAQTGGHFGSNLGVVELTVALH 62

Query: 136 HVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGC 195
            VF AP D ++WDVG Q Y HKILTGR+  IHT+RKK G++ +  R ESEYD F+ GH  
Sbjct: 63  RVFDAPKDLLIWDVGHQAYPHKILTGRKDRIHTIRKKGGLAPFPKREESEYDAFSVGHSS 122

Query: 196 NSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHS 255
            S+SA +GMA+A   K     +V +I +G    G A+EA++ AG  + NM+V+LND++ S
Sbjct: 123 TSISAAVGMAIANKEKKDAPQVVAIIGDGALTGGMAFEALNYAGDANVNMLVVLNDNKMS 182

Query: 256 LHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARG 315
           + P        ++  +   L+R+ SS S+   R   + +   I   + + A K +EYA+G
Sbjct: 183 ISP--------NVGGMGKYLTRLISSPSYVNFRAKGREILDSI-PAIGKLARKAEEYAKG 233

Query: 316 MIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR----R 371
           MI P   TLFEELG  Y GP+DGH++ +L+ VL ++  +   GP ++H++T++ +     
Sbjct: 234 MITP--GTLFEELGFEYYGPIDGHDVNELVEVLSDLKKI--RGPKILHIITKKGKGYVPA 289

Query: 372 AEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMD 431
            ED     A++         N    G     Y + F E +    EKDK+I VV   M   
Sbjct: 290 EEDEFSLHAVKPFDPITGKKNGD--GKNKINYTNVFSEWICDVGEKDKNICVVTPAMCSG 347

Query: 432 LSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQ 491
             L  F +KFP+RY+DVG+AEQHAVTFSAGLAC G KP   I S+FLQRAYDQ+++DV  
Sbjct: 348 SGLIDFSKKFPDRYYDVGIAEQHAVTFSAGLACQGKKPVVAIYSSFLQRAYDQLIHDVAL 407

Query: 492 QRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDD 551
           Q+L V F I  AG+VG DG T  G  D++++  +PN+++M P++++E   M+ T  +   
Sbjct: 408 QKLNVLFAIDRAGIVGPDGATHNGNLDLSYLRIVPNLVIMVPANKNECYSMLETGYNYPG 467

Query: 552 RPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSK 611
            P   RYPRG     +        ++IGK +++ +GKD+A+L +G +++NC KA   L  
Sbjct: 468 -PAAVRYPRGG-SSDEFRKTECNFLKIGKAEIVRKGKDIAILSFGTLLENCAKAAENL-- 523

Query: 612 LGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSG 670
              D T+ + RF KPLD +L++ L + H + +T+E+ SI GG GS V+ F+  +   D  
Sbjct: 524 ---DATLVNMRFVKPLDEELIKHLSKTHKYFVTIEDNSIVGGAGSAVNEFVLNN---DLN 577

Query: 671 VKWRPIVLPDNYIEHASPTQQLALAGL 697
           VK + + LPD ++ H +  + L   GL
Sbjct: 578 VKVKNLGLPDEFLPHGTREEILTEVGL 604


>gi|443322442|ref|ZP_21051464.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gloeocapsa sp. PCC 73106]
 gi|442787812|gb|ELR97523.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gloeocapsa sp. PCC 73106]
          Length = 635

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 250/640 (39%), Positives = 370/640 (57%), Gaps = 41/640 (6%)

Query: 82  LDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAP 141
           L  + +P +L  L++++L+ +A +IR +    V+ +   L   L  VELT+AL+      
Sbjct: 3   LSEITHPNQLHGLSVRQLETIARQIREKHLQTVATSGGHLGPGLGVVELTIALYQTLDLD 62

Query: 142 VDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAG 201
            DK++WDVG Q Y HK+LTGR    HTLR+KDGI+GY  R ES++D F AGH   S+SA 
Sbjct: 63  RDKVIWDVGHQAYPHKMLTGRYHQFHTLRQKDGIAGYLKRGESKFDHFGAGHASTSISAS 122

Query: 202 LGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPKI 260
           LGMA+ARD +G+   +V VI +G    G A EA+++AG+L  +N++V+LND+  S+ P  
Sbjct: 123 LGMALARDAQGEDYKVVAVIGDGALTGGMALEAINHAGHLPHTNLMVVLNDNEMSISP-- 180

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRI---GRGMHEWAAKVDEYARGMI 317
                 ++ A+S  L++++ S+  + L +  +   K +   G  +     +V E  + + 
Sbjct: 181 ------NVGAISRYLNKVRLSEPIQFLSDNLEEQFKHLPFLGESLTPEMERVKEGMKRLA 234

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQK 377
            P+   + EELG  Y GP+DGHN+ +LI   ++   +   GPVL+HV T + +  E  ++
Sbjct: 235 VPKVGAVIEELGFTYFGPIDGHNLTELIHTFKQGHRV--KGPVLIHVATVKGKGYEIAEQ 292

Query: 378 SEAIEKQQEGASDSNSLPF-GNYSRT--YDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
            +     Q   + S   P   N  +   Y   F   L   AE +  I+ + A M     L
Sbjct: 293 DQVGYHAQNPFNLSTGKPIPSNKPKPPGYAKVFGHTLTKLAENNPKIIAITAAMATGTGL 352

Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
                K P++Y DVG+AEQHAVT +AGLAC G++P   I S FLQRAYDQ+++DV  Q L
Sbjct: 353 DKLHVKLPKQYIDVGIAEQHAVTLAAGLACQGMRPVVAIYSTFLQRAYDQIIHDVCIQNL 412

Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
           PV F +  AG+VG+DGPT  G +DI ++ C+PNM++MAP DE EL +M+ T  +    P+
Sbjct: 413 PVFFCLDRAGIVGADGPTHQGMYDIAYLRCIPNMVIMAPKDEAELQEMIVTGVNHTSGPI 472

Query: 555 CFRYPRGAIVRTDLPGYRGIP--------IEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 606
             RYPRG        GY G+P        + IGKG++L  G+D+ LLGYG+MV   ++A 
Sbjct: 473 AMRYPRGN-------GY-GVPLMEEGWESLTIGKGEILRNGEDILLLGYGSMVYTTMQAA 524

Query: 607 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDG 665
            +LS+ GI+ TV +ARF KPLD +L+  L +    ++TVEEG + GGFGS V+     + 
Sbjct: 525 EVLSEHGIEATVINARFVKPLDTELIFPLARRIGKVVTVEEGCLMGGFGSAVA-----EA 579

Query: 666 LLDS--GVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIA 703
           LLD+   V  +   +PD  +EHA P Q  A  GL    IA
Sbjct: 580 LLDNDISVHLKRFGIPDQLVEHAEPNQSKAGLGLNSDQIA 619


>gi|376004243|ref|ZP_09781985.1| 1-deoxyxylulose-5-phosphate synthase, thiamine-requiring,
           FAD-requiring [Arthrospira sp. PCC 8005]
 gi|375327379|emb|CCE17738.1| 1-deoxyxylulose-5-phosphate synthase, thiamine-requiring,
           FAD-requiring [Arthrospira sp. PCC 8005]
          Length = 624

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 251/623 (40%), Positives = 358/623 (57%), Gaps = 31/623 (4%)

Query: 94  LTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDKILWDVGEQT 153
           ++I EL+ +A +IR +    V+ T   L   L  VELT+ L+       DK++WDVG Q 
Sbjct: 1   MSIHELEAVAQQIREKHLETVAATGGHLGPGLGVVELTLGLYQTLDLDRDKVIWDVGHQA 60

Query: 154 YAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDIKGK 213
           Y HK++TGR +  +TLR+KDG++GY  R ES +D F AGH   S+SA LGMA+ARD++G 
Sbjct: 61  YPHKMITGRYNNFNTLRQKDGVAGYLKRCESRFDHFGAGHASTSISAALGMALARDMQGD 120

Query: 214 RECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPKIEESPK-TSINAL 271
              +V +I +G    G A EA+++AG+L ++N++V+LND+  S+ P +   P+  +   L
Sbjct: 121 NYKVVAIIGDGAMTGGMALEAINHAGHLPNTNLMVVLNDNEMSISPNVGAIPRYLNKMRL 180

Query: 272 SSTLSRIQSS--KSFRQLREVAKGMT---KRIGRGMHEWAAKVDEYARGMIGPQGSTLFE 326
           S  +  ++ +  + F+Q+  V +  T   +R+  GM   A            P+   + E
Sbjct: 181 SPPVQFLKDNLREQFKQIPFVGENFTPEMERLKEGMKRLAV-----------PKLGAIIE 229

Query: 327 ELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSEAIEKQQE 386
           ELG  YIGPVDGHN+EDLI   Q+   +   GPV+VHV T + +     +K +     Q 
Sbjct: 230 ELGFTYIGPVDGHNLEDLIETFQQAHEI--KGPVMVHVSTVKGKGYAIAEKDQVGYHAQS 287

Query: 387 --GASDSNSLPFGN-YSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPE 443
               +   ++P       +Y   F + LV  AE +  I+ + A M     L   Q K PE
Sbjct: 288 PFNLATGKAIPSNKPKPPSYSKVFADTLVKLAEDNSQILGITAAMATGTGLDKLQAKLPE 347

Query: 444 RYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSA 503
           +Y DVG+AEQHAVT +AGLAC G++P   I S FLQRAYDQ+++DV  Q LPV F +  A
Sbjct: 348 QYIDVGIAEQHAVTLAAGLACEGMRPVVAIYSTFLQRAYDQIIHDVCIQNLPVFFCLDRA 407

Query: 504 GLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYPRGAI 563
           G+VG DGPT  G +DI ++ CLPNM +MAP DE EL  M+ T  +    P+  RYPRG+ 
Sbjct: 408 GIVGVDGPTHQGMYDIAYLRCLPNMTIMAPKDEAELQQMLVTGINHTSGPIAMRYPRGSG 467

Query: 564 VRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARF 623
               L      PI IGKG++L +G D+ LLGYG MV   ++   +L + GID TV +ARF
Sbjct: 468 NGVPLMEEGWEPIAIGKGEILRQGDDLLLLGYGTMVNTAMQVAEILGEHGIDATVVNARF 527

Query: 624 CKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSG--VKWRPIVLPD 680
            KPLD +L+  L Q    ++T+EEG I GGFGS V+     + LLD    V  +   +PD
Sbjct: 528 VKPLDTELIVPLAQKIGKVVTLEEGCIMGGFGSAVA-----EALLDHDVLVPVKRFGIPD 582

Query: 681 NYIEHASPTQQLALAGLTGHHIA 703
             ++HA+P Q     GLT   IA
Sbjct: 583 QLVDHATPDQSKVDLGLTSSQIA 605


>gi|282900458|ref|ZP_06308407.1| Deoxyxylulose-5-phosphate synthase [Cylindrospermopsis raciborskii
           CS-505]
 gi|281194651|gb|EFA69599.1| Deoxyxylulose-5-phosphate synthase [Cylindrospermopsis raciborskii
           CS-505]
          Length = 630

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 247/633 (39%), Positives = 364/633 (57%), Gaps = 29/633 (4%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L  + +P +L  L+I++L+++A +IR +    V+ +   L   L  VELT+ L+     
Sbjct: 2   LLSEITHPNQLHGLSIRQLQEIAKQIRDKHLQTVAASGGHLGPGLGVVELTLGLYQTLDL 61

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
             DK++WDVG Q Y HK++TGR    HTLR+KDG++GY  R ES++D F AGH   S+SA
Sbjct: 62  DWDKVIWDVGHQAYPHKLITGRYHDFHTLRQKDGVAGYLKRCESQFDHFGAGHASTSISA 121

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPK 259
            LGMA+ARD+KG++  +  VI +G    G A EA+++AG+L  +N++V+LND+  S+ P 
Sbjct: 122 ALGMALARDMKGEKFKVAAVIGDGALTGGMALEAINHAGHLPKTNLLVVLNDNEMSISPN 181

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREV--AKGMTKRIGRGMHEWAAKVDEYARGMI 317
           +   P+       S   +  +     QL+ +       +R+  GM   A           
Sbjct: 182 VGAIPRYLNKMRLSPPVQFIADNIEEQLKHIPFVGDELERVTEGMKRLAMS--------- 232

Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQK 377
             +   +FEELG  Y+GPVDGHN+E+LI+  Q+   +   GPVLVHV T + +  E  +K
Sbjct: 233 --KLGAVFEELGFTYMGPVDGHNLEELITTFQQAHQI--PGPVLVHVATVKGKGYEVAEK 288

Query: 378 SEAIEKQQE--GASDSNSLPFGNYSR--TYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
            +     Q     +   ++P  N  +   Y   F   LV  AE++  IV + A M     
Sbjct: 289 DQVGYHAQNPFNLATGKAIP-SNKPKPPAYSKVFSHTLVKLAEQNPKIVGITAAMATGTG 347

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L   Q K P +Y DVG+AEQHAVT +AGLAC G++P   I S FLQRAYDQ+++DV  Q 
Sbjct: 348 LDKLQAKLPHQYIDVGIAEQHAVTLAAGLACEGMRPVAAIYSTFLQRAYDQIIHDVCIQN 407

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPV F +  AG+VG+DGPT  G +DI ++ C+PNM++MAP DE EL  MV T       P
Sbjct: 408 LPVFFCLDRAGIVGADGPTHQGMYDIAYLRCIPNMVLMAPKDEAELQRMVVTGVEYTSGP 467

Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 613
           +  R+PRG      L      P+EIGKG++L +G D+ ++GYG MV + ++   +L + G
Sbjct: 468 IAMRFPRGNGYGVPLMEEGWEPLEIGKGEILRQGDDLLIVGYGTMVNSGMQVAQILREHG 527

Query: 614 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSG-- 670
           I+ +V +ARF KPLDI L+  L      ++T+EEG + GGFGS V+     + LLD+   
Sbjct: 528 IEASVINARFVKPLDIDLIVPLAGKIGRVVTLEEGCLMGGFGSAVA-----EALLDANVV 582

Query: 671 VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIA 703
           V  + I +PD  ++HA+P +     GLT   IA
Sbjct: 583 VPVKRIGIPDELVDHATPEESKVTLGLTSQQIA 615


>gi|160897685|ref|YP_001563267.1| 1-deoxy-D-xylulose-5-phosphate synthase [Delftia acidovorans SPH-1]
 gi|160363269|gb|ABX34882.1| deoxyxylulose-5-phosphate synthase [Delftia acidovorans SPH-1]
          Length = 638

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 259/641 (40%), Positives = 379/641 (59%), Gaps = 32/641 (4%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L  +++P  L+ L+  ELK LA ++R+ +   VSKT   L S+L  VELTVALH VF  
Sbjct: 20  LLQTIDDPSDLRRLSRAELKTLAQQLRAYVLDSVSKTGGHLSSNLGTVELTVALHAVFDT 79

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+++WDVG QTY HKILTGRR  + +LR+  G+SG+  R+ES YD F   H   S+SA
Sbjct: 80  PYDRVVWDVGHQTYPHKILTGRRERMASLRQFGGLSGFPQRAESPYDTFGTAHSSTSISA 139

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKI 260
            LGMA+A   KG+    + VI +G   AG A+EA++NAG  D+N++VILND+  S+ P  
Sbjct: 140 ALGMALAAKQKGEDRRAIAVIGDGAMTAGMAFEALNNAGVTDANLLVILNDNDMSISP-- 197

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQ 320
                  + AL+  L+++ S + + + R++ K + K++   + E A ++++ A+GM+ P 
Sbjct: 198 ------PVGALNRYLAQLMSGQFYAKARDMGKSVLKQV-PPLLELAKRLEQQAKGMVVP- 249

Query: 321 GSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSEA 380
            +TLFE  G  YIGP+DGH+++ LI  L+ + SL   GP  +HVVT++  +     +++ 
Sbjct: 250 -ATLFENFGFNYIGPIDGHDLDSLIPTLENIKSL--KGPQFLHVVTKKG-QGYKLAEADP 305

Query: 381 IEKQQEGASDSN---SLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLF 437
           +     G  D +     P     +T+   F   L   A+KD+ +V +   M     +  F
Sbjct: 306 VAYHGPGKFDPSVGLVKPATPPKQTFTQVFGHWLCDMADKDQRLVGITPAMREGSGMVEF 365

Query: 438 QEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVR 497
            ++FP RY+DVG+AEQHAVTF+AG+AC GLKP   I S FLQR YDQ+++DV  Q+LPV 
Sbjct: 366 HKRFPGRYYDVGIAEQHAVTFAAGMACEGLKPVVAIYSTFLQRGYDQLIHDVALQKLPVV 425

Query: 498 FVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFR 557
           F +  AGLVG+DG T  GA+DI F+ C+P+M +  P+DE E   ++ T A   D PV  R
Sbjct: 426 FALDRAGLVGADGATHAGAYDIAFVRCIPHMSMACPADERECRQLL-TTAYEQDHPVAVR 484

Query: 558 YPRGAIVR-TDLPGYRGIPIEIGKGKVLVEG--KDVALLGYGAMVQNCLKARALLSKLGI 614
           YPRGA V    L    G+P   GKG+V  E   K VA+L +G ++   L A   L     
Sbjct: 485 YPRGAGVGVAPLESLEGLP--FGKGEVRRESAKKQVAILAFGTLLYPALAAAEALDA--- 539

Query: 615 DVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVKW 673
             TV + R+ KPLD +L+R++   H  ++TVEEG I GG GS V+  +   G+    ++ 
Sbjct: 540 --TVVNMRWAKPLDEELLRQVASTHELIVTVEEGCIMGGAGSAVAESLQAAGITRQLLQ- 596

Query: 674 RPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTR 714
             + LPD +IEH  P + LAL GL    I A+  + L   R
Sbjct: 597 --LGLPDEFIEHGDPAKLLALQGLDAAGIEASVRAHLAPER 635


>gi|336451116|ref|ZP_08621561.1| 1-deoxy-D-xylulose-5-phosphate synthase [Idiomarina sp. A28L]
 gi|336281961|gb|EGN75207.1| 1-deoxy-D-xylulose-5-phosphate synthase [Idiomarina sp. A28L]
          Length = 619

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 252/619 (40%), Positives = 368/619 (59%), Gaps = 35/619 (5%)

Query: 76  KEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALH 135
             P P+L L+++P  L+ L  ++L Q++ E+R  L S VSK+   L S L  VELTVALH
Sbjct: 6   NNPFPLLHLIDSPADLRGLPKQKLNQVSDELRQFLLSSVSKSSGHLASGLGTVELTVALH 65

Query: 136 HVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGC 195
           +VF  P D I+WDVG Q Y HKILTGRR  +HT+R+KDG+  +  R ESEYD  + GH  
Sbjct: 66  YVFKTPFDHIVWDVGHQAYPHKILTGRRDRLHTIRQKDGLHPFPWREESEYDVLSVGHSS 125

Query: 196 NSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHS 255
            S+SA LG+A+A + +G+    V +I +G   AG A+EAM++AG +  +M+VILND+  S
Sbjct: 126 TSISAALGLAIAAEREGENRKTVAIIGDGALTAGMAFEAMNHAGDVAPDMLVILNDNDMS 185

Query: 256 LHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARG 315
           +          ++ AL++  +R+ S K +  LRE +K +   +   M E  ++ +E+ +G
Sbjct: 186 I--------SENVGALNNHFARLLSGKVYTSLREGSKQLLSAL-PSMRELVSRAEEHVKG 236

Query: 316 MIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDT 375
           M+ P   T+FEELG  YIGP+DGH+++ L+  L  + +L   GP L+HVVT + +     
Sbjct: 237 MVTP--GTIFEELGFNYIGPIDGHDVDALVDTLSNMRTL--KGPQLLHVVTRKGKGYGPA 292

Query: 376 QKSEAIEKQQEGASDS--NSLPFGNYS-RTYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
           +K + I        D   +SLP    S  +Y   F E L   A+ D  ++ +   M    
Sbjct: 293 EK-DPIGYHGVPKFDPSIDSLPAKAPSIPSYSAVFGEWLCEVAQGDNKLMAITPAMREGS 351

Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
            +  F  +FP++YFDV +AEQHAVTF++GLA  G+KP   I S FLQRAYDQ+++DV  Q
Sbjct: 352 GMVEFARRFPKQYFDVAIAEQHAVTFASGLAIAGMKPVVAIYSTFLQRAYDQLIHDVALQ 411

Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
            L V F I  AG+VG+DGPT  GAFD++FM C+PN+I+M PSDE+E   M++T   +   
Sbjct: 412 NLDVLFAIDRAGIVGADGPTHQGAFDLSFMRCIPNLIIMTPSDENECRLMLST-GYLHQG 470

Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIE---IGKGKVLVEGKDVALLGYGAMVQNCLKARALL 609
           P   RYPRG     D       P+E   IGK + +  GK +A+L +G ++       A+L
Sbjct: 471 PAAVRYPRGNGTGVDYS-----PLEALTIGKSRTVRSGKKIAILNFGTLL-----GEAVL 520

Query: 610 SKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLD 668
           +   +D TV D RF KPLDI+ V    + H  L+T+EE ++ GG GS VS  +A   +  
Sbjct: 521 AAEKLDATVIDMRFVKPLDIEAVLAAAEQHDILVTLEENAVSGGAGSAVSEALAAARVNQ 580

Query: 669 SGVKWRPIVLPDNYIEHAS 687
           S +    + LPD++I+H S
Sbjct: 581 SVLH---LGLPDSFIKHGS 596


>gi|428318404|ref|YP_007116286.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oscillatoria nigro-viridis
           PCC 7112]
 gi|428242084|gb|AFZ07870.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oscillatoria nigro-viridis
           PCC 7112]
          Length = 635

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 255/647 (39%), Positives = 376/647 (58%), Gaps = 33/647 (5%)

Query: 82  LDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAP 141
           L  + +P +L  L+I +L+Q+A +IR +    V+ +   L   L  VELT+AL+      
Sbjct: 3   LSELTHPNQLHGLSIHQLEQIARQIREKHLETVAASGGHLGPGLGVVELTLALYQTLDLD 62

Query: 142 VDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAG 201
            DK+ WDVG Q Y HK++TGR +  HTLR+KDG++GY  R ES++D F AGH   S+SA 
Sbjct: 63  RDKVTWDVGHQAYPHKLITGRYNQFHTLRQKDGVAGYLKRCESKFDHFGAGHASTSISAA 122

Query: 202 LGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPKI 260
           LGMA+ARD+KG+    V VI +G    G A EA+++AG++  +N++V+LND+  S+ P  
Sbjct: 123 LGMAMARDLKGENFKTVAVIGDGALTGGMALEAINHAGHMPKTNLLVVLNDNEMSISP-- 180

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGM---- 316
                 ++ A++  L++++ S   + L++  +   K I      +  +++    GM    
Sbjct: 181 ------NVGAITRYLNKMRLSPPVQFLKDNLEEQFKHIPFVGETFTPEMERLKEGMKRLA 234

Query: 317 IGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQ 376
           +   G+ + EELG  Y+GPVDGHN+E+LI+  ++  ++   GPVLVHVVT + +     +
Sbjct: 235 VSKVGAVI-EELGFTYMGPVDGHNLEELIATFKQAHTI--QGPVLVHVVTVKGKGYAIAE 291

Query: 377 KSEAIEKQQE--GASDSNSLPFGN-YSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
           K +     Q     +    LP        Y   F  ALV  AE +  IV + A M     
Sbjct: 292 KDQVGYHAQNPFNLATGKGLPSTKPKPPAYSKVFAHALVKLAENNPKIVGITAAMATGTG 351

Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
           L   QEK P++Y DVG+AEQHAVT SAGLAC G++P   I S F+QR YDQ+++DV  Q 
Sbjct: 352 LDKLQEKLPKQYIDVGIAEQHAVTLSAGLACEGMRPVVAIYSTFVQRGYDQIIHDVCIQN 411

Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
           LPV F +  AG+VG+DGPT  G +DI+F+ CLPNM +MAP DE EL  MV T  +    P
Sbjct: 412 LPVFFCLDRAGIVGADGPTHQGMYDISFLRCLPNMTIMAPKDEAELQRMVVTGINHTSGP 471

Query: 554 VCFRYPRGAIVRTDL--PGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSK 611
           +  RYPRG      L   G+  +P  IGK ++L  G D+ +LGYG+MV   ++   +LS+
Sbjct: 472 IAMRYPRGNGYGVPLMEEGWEEVP--IGKAEILRNGDDLLILGYGSMVYPAMQTAEILSE 529

Query: 612 LGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSG 670
            GI+ TV +ARF KPLD +L+  L Q    ++T+EEG + GGFGS V+     + LLD+ 
Sbjct: 530 HGIEATVINARFVKPLDTELILPLAQRIGKVVTMEEGCLMGGFGSAVA-----EALLDNN 584

Query: 671 VKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTR 714
           V   P++   +PD  ++HA+P Q  A  GL    +    L+   R +
Sbjct: 585 VVV-PVMRLGVPDTLVDHATPEQSFASLGLNPSQMCDRILATFSRKQ 630


>gi|67920284|ref|ZP_00513804.1| Deoxyxylulose-5-phosphate synthase [Crocosphaera watsonii WH 8501]
 gi|416375998|ref|ZP_11683413.1| 1-deoxy-D-xylulose 5-phosphate synthase [Crocosphaera watsonii WH
           0003]
 gi|67857768|gb|EAM53007.1| Deoxyxylulose-5-phosphate synthase [Crocosphaera watsonii WH 8501]
 gi|357266450|gb|EHJ15076.1| 1-deoxy-D-xylulose 5-phosphate synthase [Crocosphaera watsonii WH
           0003]
          Length = 636

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 249/629 (39%), Positives = 363/629 (57%), Gaps = 25/629 (3%)

Query: 85  VENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDK 144
           + +P +L  L+I++L+ +  +IR +    ++ +   L   L  VELTVAL+       DK
Sbjct: 6   ITHPNQLHGLSIRQLEDVTRQIREKHLQTIAASGGHLGPGLGVVELTVALYQTLDLDRDK 65

Query: 145 ILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGM 204
           ++WDVG Q Y HK+LTGR    HTLR+KDGI+GY  R ES++D F AGH   S+SAGLGM
Sbjct: 66  VIWDVGHQAYPHKMLTGRYHDFHTLRQKDGIAGYLKRCESKFDHFGAGHASTSISAGLGM 125

Query: 205 AVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHPKIEES 263
           A+ARD KG+   +V++I +G    G A EA+++AG+L  +N++V+LND+  S+ P     
Sbjct: 126 ALARDAKGEDYKVVSIIGDGALTGGMALEAINHAGHLPHTNLMVVLNDNEMSISP----- 180

Query: 264 PKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRI---GRGMHEWAAKVDEYARGMIGPQ 320
              ++ A+S  L++++ S   + L +  +   K +   G  +     +V E  + +  P+
Sbjct: 181 ---NVGAISRYLNKVRLSDPVQFLSDNLEEQFKHLPFFGESLTPDMERVKEGMKRLAMPK 237

Query: 321 GSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSEA 380
              + EELG  Y GP+DGHN+E+LIS  ++     + GPV VHV T + +  E  +K + 
Sbjct: 238 VGAVIEELGFKYFGPIDGHNLEELISTFKQAHK--TPGPVFVHVATVKGKGYELAEKDQV 295

Query: 381 IEKQQE--GASDSNSLPFGN-YSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLF 437
               Q     +   ++P       +Y   F   L   A+ +  I+ + A M     L   
Sbjct: 296 GYHAQSPFNLATGKAIPSNKPKPPSYSKVFAHTLTTLAQNNPKIIGITAAMATGTGLDKL 355

Query: 438 QEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVR 497
           Q K P++Y DVG+AEQHAVT +AGLAC G++P   I S FLQRAYDQV++DV  Q LPV 
Sbjct: 356 QAKLPKQYIDVGIAEQHAVTLAAGLACEGIRPVTAIYSTFLQRAYDQVLHDVCIQNLPVF 415

Query: 498 FVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFR 557
             +  AG+VG+DGPT  G +DI ++ C+PN+ +MAP DE EL  MV T  +  D P+  R
Sbjct: 416 LCLDRAGIVGADGPTHQGLYDIAYLRCIPNLTIMAPKDEAELQRMVVTGINYTDGPIAMR 475

Query: 558 YPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVT 617
           YPRG  V   L      PI +GKG++L  G DV L+ YG MV   L+   LL + GI+ T
Sbjct: 476 YPRGNGVGVPLMEEGWEPIPVGKGEILRSGDDVLLVAYGTMVHQSLQVAELLKEHGIEAT 535

Query: 618 VADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSG--VKWR 674
           V +ARF KPLD +L+  L Q    ++T+EEG + GGFGS V+     + L+D+   V  +
Sbjct: 536 VINARFVKPLDTELILPLAQRIGKVVTLEEGCLMGGFGSAVA-----EALMDNDVVVPIK 590

Query: 675 PIVLPDNYIEHASPTQQLALAGLTGHHIA 703
              +PD  ++HA P Q  A  GLT   IA
Sbjct: 591 RFGVPDKLVDHAKPDQSKADLGLTSPQIA 619


>gi|418464202|ref|ZP_13035142.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           actinomycetemcomitans RhAA1]
 gi|359756998|gb|EHK91154.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           actinomycetemcomitans RhAA1]
          Length = 617

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 251/635 (39%), Positives = 369/635 (58%), Gaps = 25/635 (3%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+L L+ +P  L+ L  ++L Q+  E+R  L   VS++   L S L  VELTVALH+VF 
Sbjct: 5   PLLSLINSPEDLRLLNKEQLPQVCQELREYLLESVSQSSGHLASGLGTVELTVALHYVFK 64

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG Q Y HKILTGRR  + T+R+K G+  +  R ESE+D  + GH   S+S
Sbjct: 65  TPFDQLIWDVGHQAYPHKILTGRRDQMPTIRQKGGLHPFPWRGESEFDVLSVGHSSTSIS 124

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           AGLG+A+A + +      V VI +G   AG A+EA+++AG L ++M+VILND+  S+   
Sbjct: 125 AGLGIAIAAERENAGRKTVCVIGDGAITAGMAFEALNHAGSLHTDMLVILNDNEMSI--- 181

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                  ++ AL++ L+R+ S   +  +RE  K +   +   + E+  K +E+ +G + P
Sbjct: 182 -----SENVGALNNHLARLLSGSFYSSIREGGKKILSGV-PPIKEFVKKTEEHVKGFVSP 235

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
            GST+FEELG  YIGP+DGHN+E+LIS LQ ++SL   GP  +H+VT++ +     +K  
Sbjct: 236 -GSTMFEELGFNYIGPIDGHNVEELISTLQNMSSL--KGPQFLHIVTKKGKGYTPAEKDP 292

Query: 380 -AIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQ 438
                  +    S  LP  N + TY   F + L   AE+D  ++ +   M     +  F 
Sbjct: 293 IGFHGVPKFNHLSGELPKFNATPTYSKIFGDWLCEMAEQDPKLIGITPAMREGSGMVEFS 352

Query: 439 EKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRF 498
           ++FP++YFDV +AEQHAVTF+ GLA GG KP   I S FLQRAYDQ+++DV  Q LPV F
Sbjct: 353 QRFPQQYFDVAIAEQHAVTFATGLAIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPVLF 412

Query: 499 VITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRY 558
            I  AG+VG+DG T  GAFDI+FM C+PN+++M PS+E+E   M+ T      +P   RY
Sbjct: 413 AIDRAGIVGADGQTHQGAFDISFMRCIPNIVIMTPSNENECRQMLYTGYHC-GKPAAVRY 471

Query: 559 PRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTV 618
           PRG  +   +       +E+GK K++ EGK +A+L +G ++ N L+    LS      TV
Sbjct: 472 PRGNAL--GVELEPLQLLELGKSKLIREGKKIAILNFGTLLPNALQVAEKLS-----ATV 524

Query: 619 ADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVKWRPIV 677
            D RF KPLD   + E+ + H  ++T+EE +I GG GS V+  +         VK   + 
Sbjct: 525 IDMRFVKPLDTARINEIAKTHELIVTLEENAIQGGAGSAVAEVLYHQ---QHQVKLLQLG 581

Query: 678 LPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 712
           LPD +I   + ++ L    L    I    L  LG 
Sbjct: 582 LPDFFIPQGTQSEMLTELKLDAAGIEWQILDFLGE 616


>gi|350570639|ref|ZP_08938989.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria wadsworthii
           9715]
 gi|349795412|gb|EGZ49211.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria wadsworthii
           9715]
          Length = 626

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 259/639 (40%), Positives = 369/639 (57%), Gaps = 48/639 (7%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           TP+LD +  P  L+ L   +L +LA E+R+ L   VSKT     S+L A+EL++ALH+V+
Sbjct: 3   TPLLDTINLPSDLRCLEKTQLPRLAGELRAFLLESVSKTGGHFASNLGAIELSIALHYVY 62

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
           + P D ++WDVG Q+Y HKILTGRR  +HT+R+  G++G+  RSESEYD F  GH   S+
Sbjct: 63  NTPNDHLVWDVGHQSYPHKILTGRRHRMHTMRQYSGLAGFPKRSESEYDDFGVGHSSTSI 122

Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
            A LGMAVA  + G+    V +I +G   AGQA+EA++NAG +D +++VILND+  S+ P
Sbjct: 123 GAALGMAVADKLAGRSNRSVAIIGDGAMTAGQAFEALNNAGDMDIDLLVILNDNEMSISP 182

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGR------GMHEWAAKVDEY 312
            +   PK              +S   R +R V   +  + G+      G  E A KV+  
Sbjct: 183 NVGALPK------------YLASNVVRDMRGVLSTIKNQTGKVLDKLPGALEIAQKVEHK 230

Query: 313 ARGMIG-----PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTE 367
            + +        Q  +LFE  G  Y GPVDGHN+E L+ VL+E+ S    GP L+HV+T+
Sbjct: 231 IKAIASEGDHIKQSLSLFENFGFEYTGPVDGHNVEHLVDVLRELRS--KKGPQLLHVITK 288

Query: 368 EN---RRAE-DTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVV 423
           +    + AE D  K  AI K    AS+++  P      TY   F + L+ +AE D  +V 
Sbjct: 289 KGNGYKLAERDPVKYHAIGKTPT-ASEADK-PAAPPKPTYTQIFGQWLIDQAEADNRLVA 346

Query: 424 VHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYD 483
           +   M     L  F+++FPERYFDVG+AEQHAVTF+AGLAC G KP   I S FLQR YD
Sbjct: 347 ITPAMREGSGLVEFEQRFPERYFDVGIAEQHAVTFAAGLACQGAKPVVAIYSTFLQRGYD 406

Query: 484 QVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMV 543
           Q+V+DV  Q LPV F +  AG+VG+DGPT  G +D++F+ C+PNM++ APSDE E   ++
Sbjct: 407 QLVHDVALQNLPVMFAVDRAGIVGADGPTHAGVYDLSFLRCIPNMVIAAPSDEAECRLLL 466

Query: 544 ATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCL 603
           +T  ++ D P   RYPRG+     +P      + +GKG +  +G   A+L +G+MV+  L
Sbjct: 467 STCYAL-DAPTVVRYPRGS-GNGAVPAANLETVPLGKGIIRRQGNKTAILAFGSMVRPSL 524

Query: 604 KARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-IGGFGSHVSHFIA 662
               +  KL  + TVAD RF KPLD  L+ +L + H +L+  EE +  GG GS V   +A
Sbjct: 525 ---GVAEKL--NATVADMRFVKPLDEPLILQLAREHDYLVCTEENAEQGGAGSAVLELLA 579

Query: 663 LDGLLDSGVKWRPIVLP---DNYIEHASPTQQLALAGLT 698
              +       +P++L    D   EH  P   L   GL+
Sbjct: 580 KHKIC------KPVLLAAIEDIVTEHGDPALLLDQLGLS 612


>gi|333916048|ref|YP_004489780.1| 1-deoxy-D-xylulose-5-phosphate synthase [Delftia sp. Cs1-4]
 gi|333746248|gb|AEF91425.1| 1-deoxy-D-xylulose-5-phosphate synthase [Delftia sp. Cs1-4]
          Length = 626

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 259/641 (40%), Positives = 378/641 (58%), Gaps = 32/641 (4%)

Query: 81  ILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHA 140
           +L  +++P  L+ L+  ELK LA ++R+ +   VSKT   L S+L  VELTVALH VF  
Sbjct: 8   LLQTIDDPSDLRRLSRAELKTLAQQLRAYVLDSVSKTGGHLSSNLGTVELTVALHAVFDT 67

Query: 141 PVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSA 200
           P D+++WDVG QTY HKILTGRR  + +LR+  G+SG+  R+ES YD F   H   S+SA
Sbjct: 68  PYDRVVWDVGHQTYPHKILTGRRERMASLRQFGGLSGFPQRAESPYDTFGTAHSSTSISA 127

Query: 201 GLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKI 260
            LGMA+A   KG+    + VI +G   AG A+EA++NAG  D+N++VILND+  S+ P  
Sbjct: 128 ALGMALAAKQKGEDRRAIAVIGDGAMTAGMAFEALNNAGVTDANLLVILNDNDMSISP-- 185

Query: 261 EESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQ 320
                  + AL+  L+++ S + + + R++ K + K++   + E A ++++ A+GM+ P 
Sbjct: 186 ------PVGALNRYLAQLMSGQFYAKARDMGKSVLKQV-PPLLELAKRLEQQAKGMVVP- 237

Query: 321 GSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSEA 380
            +TLFE  G  YIGP+DGH+++ LI  L+ + SL   GP  +HVVT++  +     +++ 
Sbjct: 238 -ATLFENFGFNYIGPIDGHDLDSLIPTLENIKSL--KGPQFLHVVTKKG-QGYKLAEADP 293

Query: 381 IEKQQEGASDSN---SLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLF 437
           +     G  D +     P     +T+   F   L   A+KD+ +V +   M     +  F
Sbjct: 294 VAYHGPGKFDPSVGLVKPATPPKQTFTQVFGHWLCDMADKDQRLVGITPAMREGSGMVEF 353

Query: 438 QEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVR 497
             +FP RY+DVG+AEQHAVTF+AG+AC GLKP   I S FLQR YDQ+++DV  Q+LPV 
Sbjct: 354 HRRFPGRYYDVGIAEQHAVTFAAGMACEGLKPVVAIYSTFLQRGYDQLIHDVALQKLPVV 413

Query: 498 FVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFR 557
           F +  AGLVG+DG T  GA+DI F+ C+P+M +  P+DE E   ++ T A   D PV  R
Sbjct: 414 FALDRAGLVGADGATHAGAYDIAFVRCIPHMSMACPADERECRQLL-TTAYEQDHPVAVR 472

Query: 558 YPRGAIVR-TDLPGYRGIPIEIGKGKVLVEG--KDVALLGYGAMVQNCLKARALLSKLGI 614
           YPRGA V    L    G+P   GKG+V  E   K VA+L +G ++   L A   L     
Sbjct: 473 YPRGAGVGVAPLESLEGLP--FGKGEVRRESAKKQVAILAFGTLLYPALAAAEALDA--- 527

Query: 615 DVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSGVKW 673
             TV + R+ KPLD +L+R++   H  ++TVEEG I GG GS V+  +   G+    ++ 
Sbjct: 528 --TVVNMRWAKPLDEELLRQVASTHELIVTVEEGCIMGGAGSAVAESLQAAGITRQLLQ- 584

Query: 674 RPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTR 714
             + LPD +IEH  P + LAL GL    I A+  + L   R
Sbjct: 585 --LGLPDEFIEHGDPAKLLALQGLDAAGIEASVRAHLAPER 623


>gi|86606357|ref|YP_475120.1| 1-deoxy-D-xylulose-5-phosphate synthase [Synechococcus sp.
           JA-3-3Ab]
 gi|118595623|sp|Q2JTX2.1|DXS_SYNJA RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|86554899|gb|ABC99857.1| 1-deoxy-D-xylulose-5-phosphate synthase [Synechococcus sp.
           JA-3-3Ab]
          Length = 649

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 256/638 (40%), Positives = 374/638 (58%), Gaps = 32/638 (5%)

Query: 82  LDLVENPLRLKSLTIKELKQLAVEIRSE--LSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           L  + +P +L++L++ +L+ LA +IR +   ++  S     L   L  VELT+AL+    
Sbjct: 3   LSEITHPNQLRNLSLSQLRSLARQIREKHLQTAANSPVGCHLGPGLGVVELTLALYKTLD 62

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
              DK++WDVG Q YAHK+LTGR    HT+R+K GISGY  RSES +D F AGH   S+S
Sbjct: 63  LDRDKVIWDVGHQAYAHKMLTGRYHNFHTIRQKGGISGYLKRSESRFDHFGAGHASTSIS 122

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL-DSNMIVILNDSRHSLHP 258
           A LGMA+ARD +G+   +V +I +G    G AYEA+++AG+L  +N++VILND+  S+ P
Sbjct: 123 AALGMAIARDRRGENFKVVAIIGDGALTGGMAYEAINHAGHLPKTNLMVILNDNGMSISP 182

Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKR---IGRGMHEWAAKVDEYARG 315
                   ++ A+   L+R++ S   + L +  +   K    +G  +     ++ E  + 
Sbjct: 183 --------NVGAIPRYLNRLRLSPPVQFLADSLEEQLKNLPLVGSSLSPEIDRLKETVKL 234

Query: 316 MIGPQGST---LFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRR- 371
           +   Q +    +FEELG  Y+GPVDGHN+ +L+   +   + G  GPVLVHV T + +  
Sbjct: 235 VTAVQNNKAGIIFEELGFTYVGPVDGHNLAELLDAFE--LAHGISGPVLVHVATVKGKGY 292

Query: 372 --AEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGME 429
             AE  Q S   + + + A+     P      +Y   F   L   AE+D  I+ + A M+
Sbjct: 293 PPAEAEQVSYHAQSRFDLATGKPYPPTKPTPPSYSKVFGHTLCKLAERDPRIIGITAAMD 352

Query: 430 MDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDV 489
               L   +EK P+++ DVG+AEQHAVT +AG+AC G++P   I S FLQRAYDQ+++DV
Sbjct: 353 TGTGLDKLKEKLPDQFVDVGIAEQHAVTLAAGMACEGMRPVVAIYSTFLQRAYDQIIHDV 412

Query: 490 DQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASI 549
             Q+LPV F +  AG+VG+DGPT  G +DI ++ C+P M++MAP DE EL  MV T    
Sbjct: 413 CIQKLPVFFCLDRAGVVGADGPTHQGMYDIAYLRCIPEMVLMAPKDEAELQRMVVTGIQY 472

Query: 550 DDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALL 609
              P+  RYPRGA V   L      PI IGK +VL  G +V +L YG+MV   L+A  +L
Sbjct: 473 TKGPIAMRYPRGAGVGVPLAEEGWEPIPIGKAEVLRSGGEVLILAYGSMVHPSLQAAEIL 532

Query: 610 SKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLD 668
            + GI  TV +ARF KPLD +L+  L Q    ++TVEEG + GGFGS V      + LLD
Sbjct: 533 KEHGISTTVVNARFAKPLDTELILPLAQQSRLVVTVEEGCLMGGFGSAVG-----EALLD 587

Query: 669 SGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIA 703
           + ++  P++   +PD ++EHA+P + LA  GL    IA
Sbjct: 588 ADIRV-PLLRLGVPDVWVEHATPEESLAELGLNSVGIA 624


>gi|33151663|ref|NP_873016.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus ducreyi
           35000HP]
 gi|41016951|sp|Q7VNP7.1|DXS_HAEDU RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|33147884|gb|AAP95405.1| 1-deoxyxylulose-5-phosphate synthase [Haemophilus ducreyi 35000HP]
          Length = 617

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 252/630 (40%), Positives = 368/630 (58%), Gaps = 44/630 (6%)

Query: 80  PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
           P+L  +++P  L+ L  ++L  LA E+R+ L   VS+T   L S L  VELTVALH+V+ 
Sbjct: 6   PLLSQIDSPEDLRLLGKEDLSALANELRTYLLDSVSQTSGHLASGLGVVELTVALHYVYQ 65

Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
            P D+++WDVG Q Y HKILTGRR  +HT+R+K+GI  +  R ES YD  + GH   S+S
Sbjct: 66  TPFDQLIWDVGHQAYPHKILTGRRDQMHTIRQKNGIHPFPWREESPYDVLSVGHSSTSIS 125

Query: 200 AGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPK 259
           AGLG+AVA   +      V VI +G   AG A+EAM++AG L ++M+VILND+  S+   
Sbjct: 126 AGLGIAVAAQKENAGRKTVCVIGDGAITAGMAFEAMNHAGALHTDMLVILNDNEMSI--- 182

Query: 260 IEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGP 319
                  ++ AL++ L+RI S   +  +R+ +K +  ++   +  +  K +E+ +G+I  
Sbjct: 183 -----SENVGALNNHLARIFSGSLYTSMRDGSKKVLDKVPT-IKNFMKKSEEHMKGVIFS 236

Query: 320 QGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSE 379
             STLFEELG  YIGP+DGHNIE+L+  L  +  L   GP  +HV T++ +  E  + ++
Sbjct: 237 PDSTLFEELGFNYIGPIDGHNIEELVKTLTNMREL--KGPQFLHVRTKKGKGYEPAE-ND 293

Query: 380 AIEKQQEGASD--SNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLF 437
            I        D  S  LP      TY D F   L   AE D+ I+ +   M     +  F
Sbjct: 294 PISYHGVPRFDPASGKLPQSKIVPTYSDIFGNWLCEMAENDEKIIGITPAMREGSGMVEF 353

Query: 438 QEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVR 497
            ++FP +YFDV +AEQHAVTF+AGLA  G KP   I S FLQRAYDQ+++D+  Q LPV 
Sbjct: 354 SKRFPTQYFDVAIAEQHAVTFAAGLAIAGYKPVVAIYSTFLQRAYDQLIHDIAIQNLPVI 413

Query: 498 FVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFR 557
           F I  AG+VG+DG T  GAFD++FM C+PNM +M P+DE+E+  M+ T   +   P   R
Sbjct: 414 FAIDRAGVVGADGQTHQGAFDLSFMRCIPNMTIMCPADENEMHQMLYTAYKM-QTPTAIR 472

Query: 558 YPRGAIVRTDLPGYRGIPIE------IGKGKVLVEGKDVALLGYGAMVQNCLKARALLSK 611
           YPRG          RGI ++      +GK +++ +GK VA+L +GA++    +       
Sbjct: 473 YPRG--------NARGIALQPMAELAVGKARIIHQGKKVAILNFGALLSEAQEV-----A 519

Query: 612 LGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLDSG 670
           +  + T+ D RF KPLD  L+ EL  +H+ L+T+EE +I GG GS V+ ++   G     
Sbjct: 520 ISHNYTLVDMRFVKPLDKTLISELADSHSLLVTLEENAIQGGAGSAVNEYLQQIG----- 574

Query: 671 VKWRPIV---LPDNYIEHASPTQQLALAGL 697
            K +P+V   LPD +I  ++  +  A  GL
Sbjct: 575 -KIKPLVLIGLPDMFIPQSTQQESYADFGL 603


>gi|418062607|ref|ZP_12700377.1| 1-deoxy-D-xylulose-5-phosphate synthase, partial [Methylobacterium
           extorquens DSM 13060]
 gi|373563851|gb|EHP90009.1| 1-deoxy-D-xylulose-5-phosphate synthase, partial [Methylobacterium
           extorquens DSM 13060]
          Length = 515

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 248/527 (47%), Positives = 329/527 (62%), Gaps = 40/527 (7%)

Query: 79  TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
           T IL+ +E P RL+ L   EL+++A  +R+E+   VS T   L S L  VELTVALHHVF
Sbjct: 6   TTILEGLETPDRLRLLPESELQRVADAVRAEMIDAVSITGGHLGSGLGVVELTVALHHVF 65

Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
             P D+I+WDVG Q Y HKILTGRR  I TLR+  G+SG+T RSESEYDPF A H   S+
Sbjct: 66  DTPDDRIVWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTKRSESEYDPFGAAHSSTSI 125

Query: 199 SAGLGMAVARDI-------KG----KRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIV 247
           SA LGMAVARD+       KG    KR  ++ VI +G+  AG AYEAM+NAG L S +IV
Sbjct: 126 SAALGMAVARDLEEADAKAKGGPAPKRRNMIAVIGDGSMSAGMAYEAMNNAGALHSRLIV 185

Query: 248 ILNDSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAA 307
           ILND+  S+ P +         A+S+ L+R+ S  ++R LRE AK + K + + +++ AA
Sbjct: 186 ILNDNDMSIAPPV--------GAMSAYLARLASGGTYRSLRETAKQLGKLLPKALYQRAA 237

Query: 308 KVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTE 367
             +EYAR +I   G T+FEE+G +Y+GPVDGHN++ L+ VL+ V      GP+L+HVVT+
Sbjct: 238 AAEEYARSLI-VGGGTMFEEMGFHYVGPVDGHNLDHLLPVLKNVRD-SDQGPILLHVVTQ 295

Query: 368 ENR----------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEK 417
           + +          R     K + +   Q  A  +        +  Y   F E+L+  A+ 
Sbjct: 296 KGKGYAPAEASADRYHGVVKFDVVSGVQAKAKAN--------APAYTRVFGESLIKAADA 347

Query: 418 DKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAF 477
           D  +V + A M     + LF +  P+R FDVG+AEQHAVTF+ GLA  G KPF  I S F
Sbjct: 348 DPKVVAITAAMPGGTGIDLFGKAHPDRTFDVGIAEQHAVTFAGGLATEGYKPFVAIYSTF 407

Query: 478 LQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDED 537
           LQRAYDQVV+DV  Q L VRF +  AGLVG+DG T  GAFD+ ++ CLPNM VMA +DE 
Sbjct: 408 LQRAYDQVVHDVALQNLAVRFCLDRAGLVGADGATHAGAFDLAYLCCLPNMTVMAAADEA 467

Query: 538 ELVDMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVL 584
           ELV MVAT  + D  P+  RYPRG  V  +LP   G+P+ IG+G+V+
Sbjct: 468 ELVHMVATCHAHDSGPIALRYPRGEGVGIELP-ETGVPLAIGRGRVV 513


>gi|261346382|ref|ZP_05974026.1| 1-deoxy-D-xylulose-5-phosphate synthase [Providencia rustigianii
           DSM 4541]
 gi|282565700|gb|EFB71235.1| 1-deoxy-D-xylulose-5-phosphate synthase [Providencia rustigianii
           DSM 4541]
          Length = 621

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 259/632 (40%), Positives = 367/632 (58%), Gaps = 38/632 (6%)

Query: 75  DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
           D    P L L E P  L+ L  + L +L  E+R  L + VS++     S L  VELTVAL
Sbjct: 4   DTAKYPTLALAETPDELRLLPKESLPKLCDELRQFLLNSVSRSSGHFASGLGTVELTVAL 63

Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
           H+V+  P D ++WDVG Q Y HKILTGRR  I T+R+K+G+  +  R+ESEYD  + GH 
Sbjct: 64  HYVYKTPFDNLVWDVGHQAYPHKILTGRRDRIDTIRQKNGLHPFPWRAESEYDILSVGHS 123

Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
             S+SAGLGMA+A + + K    V VI +G   AG A+EAM++AG    +M+VILND+  
Sbjct: 124 STSISAGLGMAIAAEKEDKNRKTVCVIGDGAITAGMAFEAMNHAGDAAPDMLVILNDNEM 183

Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
           S+          ++ AL++ L+ + S K +  LRE  K +   I   + E   K +E+ +
Sbjct: 184 SI--------SENVGALNNHLAHLLSGKLYTTLREGGKKVFSNI-PPIKELLKKTEEHIK 234

Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAED 374
           GM+ P   T+FEELG  YIGPVDGH++  LI  L+ +  L   GP  +H++T++ R  E 
Sbjct: 235 GMVVP--GTMFEELGFNYIGPVDGHDVVALIQTLKNMRDL--KGPQFLHIMTKKGRGYEP 290

Query: 375 TQKS----EAIEKQQEGASDSNSLPFGNYSR-TYDDCFIEALVMEAEKDKDIVVVHAGME 429
            +K      A+ K       + +LP    +R T+   F + L  EA+ D  ++ V   M 
Sbjct: 291 AEKDPISWHAVPKFDPA---TFTLPKSKDTRPTFSKIFGDWLCEEAKNDDKLMAVTPAMR 347

Query: 430 MDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDV 489
               +  F +++P +YFDV +AEQHAVTF+AGLA GG  P   I S FLQR YDQV++DV
Sbjct: 348 EGSGMVRFSKEYPNQYFDVAIAEQHAVTFAAGLAIGGYNPVVAIYSTFLQRGYDQVIHDV 407

Query: 490 DQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASI 549
             Q+LPV F I  AG+VG+DG T  G+FDI+F+ C+P M++MAPSDE+E   M+ T    
Sbjct: 408 AIQKLPVMFAIDRAGIVGADGQTHQGSFDISFLRCIPTMVIMAPSDENECRQMLHTGYHY 467

Query: 550 DDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALL 609
            + P   RYPRGA V  +L      P+EIGKG V  +G+ VA+L +G ++ N L+A   L
Sbjct: 468 QEGPTAVRYPRGAGVGAELMPLS--PLEIGKGIVRRQGEKVAILSFGTLLSNALEAAEQL 525

Query: 610 SKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSI-GGFGSHVSHFIALDGLLD 668
                + TV D RF KPLD  L+ ++  +H  L+T+EE +I GG GS V+ F+  +    
Sbjct: 526 -----NATVVDMRFVKPLDEALILDMANSHDMLVTLEENAIMGGAGSGVNEFLMREK--- 577

Query: 669 SGVKWRPIV---LPDNYIEHASPTQQLALAGL 697
              K  PI+   LPD +I   +  + LA  GL
Sbjct: 578 ---KVLPILNLGLPDFFIPQGTQEELLADLGL 606


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.319    0.135    0.391 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,747,967,180
Number of Sequences: 23463169
Number of extensions: 447353239
Number of successful extensions: 1201994
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8466
Number of HSP's successfully gapped in prelim test: 4126
Number of HSP's that attempted gapping in prelim test: 1165730
Number of HSP's gapped (non-prelim): 14686
length of query: 721
length of database: 8,064,228,071
effective HSP length: 150
effective length of query: 571
effective length of database: 8,839,720,017
effective search space: 5047480129707
effective search space used: 5047480129707
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 81 (35.8 bits)