BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004969
(721 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q92466|DDB2_HUMAN DNA damage-binding protein 2 OS=Homo sapiens GN=DDB2 PE=1 SV=1
Length = 427
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 107/244 (43%), Gaps = 20/244 (8%)
Query: 421 TRSLCAAKVGSSAWPCLHT-LTVSGNHMGDENRSF--------RPRQFEYHPSISCLMVF 471
R+L K+G ++WP + L S H D R R +HP+ +
Sbjct: 70 VRTLHQHKLGRASWPSVQQGLQQSFLHTLDSYRILQKAAPFDRRATSLAWHPTHPSTVAV 129
Query: 472 GTLDGEIVVVNHENENIVSYIPSFGAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHM 531
G+ G+I++ N ++ ++I GA S+ GL + ++ A S G+ +L D +
Sbjct: 130 GSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKG- 188
Query: 532 PPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASGYSKNIALYDINSGRRLQVFADM 591
+I + + T+ S+ V++ + + N+ L +++ G+ L M
Sbjct: 189 --NILRVFASSDTINI----WFCSLDVSASSRMVVTGDNVGNVILLNMD-GKELWNL-RM 240
Query: 592 HKEHINVVKFSNHSPSIFATSSFDQDVKLWDLRQKPIQPCYTASSSKGNVM--VCFSPDD 649
HK+ + V + AT+S DQ VK+WDLRQ + + S + + CFSPD
Sbjct: 241 HKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDG 300
Query: 650 HYLL 653
LL
Sbjct: 301 ARLL 304
>sp|Q66JG1|DDB2_XENTR DNA damage-binding protein 2 OS=Xenopus tropicalis GN=ddb2 PE=2
SV=1
Length = 501
Score = 56.6 bits (135), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 87/193 (45%), Gaps = 12/193 (6%)
Query: 459 FEYHPSISCLMVFGTLDGEIVVVNHENENIVSYIPSFGAMNSVLGLCWLKKYPSKLIAGS 518
E+HP+ + G+ G+I++ ++E N + IP GA + G+ + P++L S
Sbjct: 127 LEWHPTHPNTVAVGSKGGDIILWDYEELN-NTLIPGIGAGGCITGMKFDPFNPNQLYTSS 185
Query: 519 DNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASGYSKNIALYD 578
GS L D G + T T D S+ V++ + + N+ L +
Sbjct: 186 VAGSTVLQDFS-------GRNIQTFTNTEDWAMWYCSLDVSAERQCVVTGDNVGNVVLLE 238
Query: 579 INSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVKLWDLRQKPIQPC--YTASS 636
G+ + +HK+ + V+F+ + A++S DQ VKLWDLR + YT
Sbjct: 239 -TCGKEIWKLR-LHKKKVTHVEFNPRCDWLLASASVDQTVKLWDLRNIKDKSSYLYTLPH 296
Query: 637 SKGNVMVCFSPDD 649
++G FSP D
Sbjct: 297 ARGVNSAYFSPWD 309
>sp|Q7ZUV2|KTNB1_DANRE Katanin p80 WD40 repeat-containing subunit B1 OS=Danio rerio
GN=katnb1 PE=2 SV=1
Length = 694
Score = 53.9 bits (128), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 94/215 (43%), Gaps = 24/215 (11%)
Query: 453 SFRPRQFEYHPSISCLMVFGTLDGEIVVVNHENENIVSY-------IPSFGAMNSVLGLC 505
S++ ++ H S +V G G ++ E+ + + I S S +G
Sbjct: 10 SWKLQEIVAHSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCI 69
Query: 506 WLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELF 565
+++AGS +GSL+L+D+ M + A ++S+ + M E
Sbjct: 70 QFNSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKA---------SISSLDFHPMGEYL 120
Query: 566 LASGYSKNIALYDINSGRRLQVFADMHKEHINVVKFSNHSP--SIFATSSFDQDVKLWDL 623
+ NI L+D+ R+ VF +K H V+ SP A++S D VKLWDL
Sbjct: 121 ASGSVDSNIKLWDVR--RKGCVF--RYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDL 176
Query: 624 RQKPIQPCYTASSSKGNVMVCFSPDDHYLLGKGSG 658
+ +T+ +S NV V F P++ YLL GS
Sbjct: 177 IAGKMITEFTSHTSAVNV-VQFHPNE-YLLASGSA 209
Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 75/158 (47%), Gaps = 16/158 (10%)
Query: 469 MVFGTLDGEIVVVNHENENIVSYIPSFGAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDI 528
+V G+L G + + + E I+ + A S L + +Y L +GS + ++KL+D+
Sbjct: 78 VVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEY---LASGSVDSNIKLWDV 134
Query: 529 RHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASGYS-KNIALYDINSGRRLQV 587
R +G + + Q S D +LAS + L+D+ +G+ +
Sbjct: 135 RR-----KGCVF-----RYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITE 184
Query: 588 FADMHKEHINVVKFSNHSPSIFATSSFDQDVKLWDLRQ 625
F H +NVV+F + + + A+ S D+ VKLWDL +
Sbjct: 185 FTS-HTSAVNVVQF-HPNEYLLASGSADRTVKLWDLEK 220
>sp|Q0VBY8|DDB2_BOVIN DNA damage-binding protein 2 OS=Bos taurus GN=DDB2 PE=2 SV=1
Length = 426
Score = 53.1 bits (126), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 93/218 (42%), Gaps = 26/218 (11%)
Query: 421 TRSLCAAKVGSSAWPCLHTL-------TVSGNHMGDENRSF--RPRQFEYHPSISCLMVF 471
R+L K+G++AWP L +++ + + F R +HP+ +
Sbjct: 69 VRALHQHKLGTAAWPSLQQGLQQSFLNSLASYRIFQKAAPFDRRATSLAWHPTHPSTLAV 128
Query: 472 GTLDGEIVVVNHENENIVSYIPSFGAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHM 531
G+ G+I++ N ++ ++I GA S+ G+ + ++ S G+ +L D +
Sbjct: 129 GSKGGDILLWNFGIKDKPTFIKGIGAGGSITGMKFNPLNTNQFFTSSMEGTTRLQDFK-- 186
Query: 532 PPSIRGMHYGAGTVTFDEFDQ----LTSVHVNSMDELFLASGYSKNIALYDINSGRRLQV 587
G F D S+ V+ + + ++ L +++ GR L
Sbjct: 187 ---------GNTLRVFASSDTCNVWFCSLDVSVKSRVVVTGDNVGHVILLNMD-GRELWN 236
Query: 588 FADMHKEHINVVKFSNHSPSIFATSSFDQDVKLWDLRQ 625
MHK+ + V + + AT+S DQ VK+WDLRQ
Sbjct: 237 L-RMHKKKVTHVALNPCCDWLLATASVDQTVKIWDLRQ 273
>sp|O74340|DCA13_SCHPO Protein sof1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=sof1 PE=3 SV=1
Length = 436
Score = 52.8 bits (125), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 74/159 (46%), Gaps = 12/159 (7%)
Query: 466 SCLMVFGTLDGEIVVVNHENENIVSYIPSFGAMNSVLGLCWLKKYPSKLIAGSDNGSLKL 525
+ ++ +D IV+ + + ++ + + NS+ W +AGS++ +L +
Sbjct: 200 TSVLASAGMDRSIVIYDLRTSSPLTKLITKLRTNSI---SWNPMEAFNFVAGSEDHNLYM 256
Query: 526 YDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASGYSKNIALYDINSGRRL 585
YD+R++ R +H V D + SV + + F++ Y K I +Y++ G
Sbjct: 257 YDMRNLK---RALH-----VYKDHVSAVMSVDFSPTGQEFVSGSYDKTIRIYNVREGHSR 308
Query: 586 QVFADMHKEHINVVKFSNHSPSIFATSSFDQDVKLWDLR 624
V+ + + VKFS + IF+ S D +V+LW R
Sbjct: 309 DVYHTKRMQRVTAVKFSMDAQYIFSGSD-DSNVRLWRAR 346
>sp|O61585|KTNB1_STRPU Katanin p80 WD40 repeat-containing subunit B1 OS=Strongylocentrotus
purpuratus GN=KATNB1 PE=1 SV=1
Length = 690
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 60/121 (49%), Gaps = 4/121 (3%)
Query: 555 SVHVNSMDELFLASGYSKNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSF 614
SV NS +EL +A S + +YD+ + ++ H+ I + F A+ S
Sbjct: 64 SVKFNSSEELVVAGSQSGTMKIYDLEPAKIVRTLTG-HRNSIRCMDFHPFG-EFVASGST 121
Query: 615 DQDVKLWDLRQKPIQPCYTASSSKGNVMVCFSPDDHYLLGKGSGTSMFVQSLR-GDPFRD 673
D +VKLWD+R+K Y S + N M+ FSPD +L+ T++ + L G F++
Sbjct: 122 DTNVKLWDVRRKGCIYTYKGHSDQVN-MIKFSPDGKWLVTASEDTTIKLWDLTMGKLFQE 180
Query: 674 F 674
F
Sbjct: 181 F 181
Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 99/218 (45%), Gaps = 30/218 (13%)
Query: 452 RSFRPRQFEYHPSISCLMVFGTLDGEIVVVNHENENIVSYIPSFGAMNSVLGLCWLK--- 508
R+++ ++ H S + G + G ++V E++ + + + G N ++ L
Sbjct: 5 RAWKLQELVAHSSNVNCLALGPMSGRVMVTGGEDKKVNLW--AVGKQNCIISLSGHTSPV 62
Query: 509 ---KYPSK---LIAGSDNGSLKLYDIR--HMPPSIRGMHYGAGTVTFDEFDQLTSVHVNS 560
K+ S ++AGS +G++K+YD+ + ++ G + F F +
Sbjct: 63 DSVKFNSSEELVVAGSQSGTMKIYDLEPAKIVRTLTGHRNSIRCMDFHPFGE-------- 114
Query: 561 MDELFLASGYS-KNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVK 619
F+ASG + N+ L+D+ + + H + +N++KFS T+S D +K
Sbjct: 115 ----FVASGSTDTNVKLWDVRRKGCIYTYKG-HSDQVNMIKFSPDG-KWLVTASEDTTIK 168
Query: 620 LWDLRQKPIQPCYTASSSKGNVMVCFSPDDHYLLGKGS 657
LWDL + + + + G + F P++ +LL GS
Sbjct: 169 LWDLTMGKLFQEF-KNHTGGVTGIEFHPNE-FLLASGS 204
>sp|P40066|GLE2_YEAST Nucleoporin GLE2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=GLE2 PE=1 SV=1
Length = 365
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 59/122 (48%), Gaps = 17/122 (13%)
Query: 516 AGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASGYSKN-I 574
A S +G ++++D+++ P R H + V + S D +ASG N +
Sbjct: 54 ASSWDGKVRIWDVQNGVPQGRAQHESSSPVLCTRW---------SNDGTKVASGGCDNAL 104
Query: 575 ALYDINSGRRLQVFADMHKEHINVVKFSNHSPS---IFATSSFDQDVKLWDLRQKPIQPC 631
LYDI SG+ Q+ MH I V++F PS T S+D+ +K WD+RQ QP
Sbjct: 105 KLYDIASGQTQQI--GMHSAPIKVLRFVQCGPSNTECIVTGSWDKTIKYWDMRQP--QPV 160
Query: 632 YT 633
T
Sbjct: 161 ST 162
>sp|Q9XF57|PEX7_ARATH Peroxisome biogenesis protein 7 OS=Arabidopsis thaliana GN=PEX7
PE=1 SV=2
Length = 317
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 68/137 (49%), Gaps = 16/137 (11%)
Query: 494 SFGAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPS--IRGMHYGAGTVTFDEFD 551
S+ ++V +CW + + S LIA +GS+K+YD PPS IR A V +++
Sbjct: 56 SYDTADAVYDVCWSESHDSVLIAAIGDGSVKIYDTALPPPSNPIRSFQEHAREVQSVDYN 115
Query: 552 QLTSVHVNSMDELFLASGYSKNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPS---I 608
+ + FL S + + L+ ++ ++ F KEH V + +P +
Sbjct: 116 P-------TRRDSFLTSSWDDTVKLWAMDRPASVRTF----KEHAYCVYQAVWNPKHGDV 164
Query: 609 FATSSFDQDVKLWDLRQ 625
FA++S D +++WD+R+
Sbjct: 165 FASASGDCTLRIWDVRE 181
Score = 43.9 bits (102), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 54/124 (43%), Gaps = 12/124 (9%)
Query: 501 VLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFD-QLTSVHVN 559
V W K+ + S + +L+++D+R T+ D ++ S N
Sbjct: 152 VYQAVWNPKHGDVFASASGDCTLRIWDVRE----------PGSTMIIPAHDFEILSCDWN 201
Query: 560 SMDELFLA-SGYSKNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDV 618
D+ LA S K + ++D+ S R + H + VKFS H S+ A+ S+D V
Sbjct: 202 KYDDCILATSSVDKTVKVWDVRSYRVPLAVLNGHGYAVRKVKFSPHRRSLIASCSYDMSV 261
Query: 619 KLWD 622
LWD
Sbjct: 262 CLWD 265
>sp|Q6P3H7|RBBP4_DANRE Histone-binding protein RBBP4 OS=Danio rerio GN=rbbp4 PE=2 SV=3
Length = 424
Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 102/233 (43%), Gaps = 24/233 (10%)
Query: 440 LTVSGNHMGDENRSFRPRQFEYHPSISCLMVFGTLDGEIVVVNHENENIVSYIPSF---- 495
+ + NH G+ NR+ Y P C++ T +++V ++ ++ PS
Sbjct: 117 IEIKINHEGEVNRA------RYMPQNPCIIATKTPTSDVLVFDY-TKHPSKPDPSGECTP 169
Query: 496 -----GAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEF 550
G GL W S L++ SD+ ++ L+DI +P G A T+
Sbjct: 170 DLRLRGHQKEGYGLSWNPNLRSCLLSASDDHTICLWDISTVPK--EGKIVDAKTIFTGHT 227
Query: 551 DQLTSVHVNSMDE-LFLASGYSKNIALYDI--NSGRRLQVFADMHKEHINVVKFSNHSPS 607
+ V + + E LF + + + ++D N+ + D H +N + F+ +S
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEF 287
Query: 608 IFATSSFDQDVKLWDLRQKPIQPCYTASSSKGNVM-VCFSPDDHYLLGKGSGT 659
I AT S D+ V LWDLR ++ ++ S K + V +SP + +L SGT
Sbjct: 288 ILATGSADKTVALWDLRNLKLK-LHSFESHKDEIFQVQWSPHNETILA-SSGT 338
Score = 42.0 bits (97), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 63/132 (47%), Gaps = 9/132 (6%)
Query: 496 GAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTS 555
G V + W + S + +D+ L ++D R S A T ++
Sbjct: 225 GHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTA------EVNC 278
Query: 556 VHVNSMDELFLASGYS-KNIALYDI-NSGRRLQVFADMHKEHINVVKFSNHSPSIFATSS 613
+ N E LA+G + K +AL+D+ N +L F + HK+ I V++S H+ +I A+S
Sbjct: 279 LSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF-ESHKDEIFQVQWSPHNETILASSG 337
Query: 614 FDQDVKLWDLRQ 625
D+ + +WDL +
Sbjct: 338 TDRRLNVWDLSK 349
>sp|Q5M7K4|RBBP4_XENTR Histone-binding protein RBBP4 OS=Xenopus tropicalis GN=rbbp4 PE=2
SV=3
Length = 425
Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 101/233 (43%), Gaps = 24/233 (10%)
Query: 440 LTVSGNHMGDENRSFRPRQFEYHPSISCLMVFGTLDGEIVVVNHENENIVSYIPSF---- 495
+ + NH G+ NR+ Y P C++ T +++V ++ ++ PS
Sbjct: 117 IEIKINHEGEVNRA------RYMPQNPCIIATKTPSSDVLVFDY-TKHPSKPDPSGECNP 169
Query: 496 -----GAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEF 550
G GL W L++ SD+ ++ L+DI +P G A T+
Sbjct: 170 DLRLRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISAVPK--EGKVVDAKTIFTGHT 227
Query: 551 DQLTSVHVNSMDE-LFLASGYSKNIALYDI--NSGRRLQVFADMHKEHINVVKFSNHSPS 607
+ V + + E LF + + + ++D N+ + D H +N + F+ +S
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEF 287
Query: 608 IFATSSFDQDVKLWDLRQKPIQPCYTASSSKGNVM-VCFSPDDHYLLGKGSGT 659
I AT S D+ V LWDLR ++ ++ S K + V +SP + +L SGT
Sbjct: 288 ILATGSADKTVALWDLRNLKLK-LHSFESHKDEIFQVQWSPHNETILAS-SGT 338
Score = 41.6 bits (96), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 63/132 (47%), Gaps = 9/132 (6%)
Query: 496 GAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTS 555
G V + W + S + +D+ L ++D R S A T ++
Sbjct: 225 GHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTA------EVNC 278
Query: 556 VHVNSMDELFLASGYS-KNIALYDI-NSGRRLQVFADMHKEHINVVKFSNHSPSIFATSS 613
+ N E LA+G + K +AL+D+ N +L F + HK+ I V++S H+ +I A+S
Sbjct: 279 LSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF-ESHKDEIFQVQWSPHNETILASSG 337
Query: 614 FDQDVKLWDLRQ 625
D+ + +WDL +
Sbjct: 338 TDRRLNVWDLSK 349
>sp|O14775|GBB5_HUMAN Guanine nucleotide-binding protein subunit beta-5 OS=Homo sapiens
GN=GNB5 PE=1 SV=2
Length = 395
Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 76/169 (44%), Gaps = 17/169 (10%)
Query: 461 YHPSISCLMVFGTLDGEIVV---VNHENENIVSYIPSFGAMNSVLGLCWLKKYPSKLIAG 517
Y PS C + G LD + V +NEN+ + S + L C +++
Sbjct: 155 YAPS-GCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTA 213
Query: 518 SDNGSLKLYDIR--HMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASGYSKNIA 575
S +G+ L+D+ + S G +GA + D + + F++ G K
Sbjct: 214 SGDGTCALWDVESGQLLQSFHG--HGADVLCLD-------LAPSETGNTFVSGGCDKKAM 264
Query: 576 LYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVKLWDLR 624
++D+ SG+ +Q F + H+ IN V++ S FA+ S D +L+DLR
Sbjct: 265 VWDMRSGQCVQAF-ETHESDINSVRYYP-SGDAFASGSDDATCRLYDLR 311
>sp|C4YFX2|TUP1_CANAW Transcriptional repressor TUP1 OS=Candida albicans (strain WO-1)
GN=TUP1 PE=4 SV=1
Length = 511
Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 79/170 (46%), Gaps = 22/170 (12%)
Query: 513 KLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASGYSK 572
+L++GS + S++++D+R S+ T D +T+V V+ +L A +
Sbjct: 310 RLVSGSGDRSVRIWDLRTSQCSL----------TLSIEDGVTTVAVSPDGKLIAAGSLDR 359
Query: 573 NIALYDINSGRRLQVF------ADMHKEHINVVKFSNHSPSIFATSSFDQDVKLWDLRQK 626
+ ++D +G ++ + H++ + V FSN+ I A+ S D+ VKLW L K
Sbjct: 360 TVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQI-ASGSLDRTVKLWHLEGK 418
Query: 627 PIQPCYTASSSKGN----VMVCFSPDDHYLL-GKGSGTSMFVQSLRGDPF 671
+ + G+ + VC +PD+ Y+L G +F G+P
Sbjct: 419 SDKKSTCEVTYIGHKDFVLSVCCTPDNEYILSGSKDRGVIFWDQASGNPL 468
>sp|P0CY34|TUP1_CANAL Transcriptional repressor TUP1 OS=Candida albicans (strain SC5314 /
ATCC MYA-2876) GN=TUP1 PE=1 SV=1
Length = 512
Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 79/170 (46%), Gaps = 22/170 (12%)
Query: 513 KLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASGYSK 572
+L++GS + S++++D+R S+ T D +T+V V+ +L A +
Sbjct: 311 RLVSGSGDRSVRIWDLRTSQCSL----------TLSIEDGVTTVAVSPDGKLIAAGSLDR 360
Query: 573 NIALYDINSGRRLQVF------ADMHKEHINVVKFSNHSPSIFATSSFDQDVKLWDLRQK 626
+ ++D +G ++ + H++ + V FSN+ I A+ S D+ VKLW L K
Sbjct: 361 TVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQI-ASGSLDRTVKLWHLEGK 419
Query: 627 PIQPCYTASSSKGN----VMVCFSPDDHYLL-GKGSGTSMFVQSLRGDPF 671
+ + G+ + VC +PD+ Y+L G +F G+P
Sbjct: 420 SDKKSTCEVTYIGHKDFVLSVCCTPDNEYILSGSKDRGVIFWDQASGNPL 469
>sp|Q60972|RBBP4_MOUSE Histone-binding protein RBBP4 OS=Mus musculus GN=Rbbp4 PE=1 SV=5
Length = 425
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 101/233 (43%), Gaps = 24/233 (10%)
Query: 440 LTVSGNHMGDENRSFRPRQFEYHPSISCLMVFGTLDGEIVVVNHENENIVSYIPSF---- 495
+ + NH G+ NR+ Y P C++ T +++V ++ ++ PS
Sbjct: 117 IEIKINHEGEVNRA------RYMPQNPCIIATKTPSSDVLVFDY-TKHPSKPDPSGECNP 169
Query: 496 -----GAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEF 550
G GL W L++ SD+ ++ L+DI +P G A T+
Sbjct: 170 DLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPK--EGKVVDAKTIFTGHT 227
Query: 551 DQLTSVHVNSMDE-LFLASGYSKNIALYDI--NSGRRLQVFADMHKEHINVVKFSNHSPS 607
+ V + + E LF + + + ++D N+ + D H +N + F+ +S
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEF 287
Query: 608 IFATSSFDQDVKLWDLRQKPIQPCYTASSSKGNVM-VCFSPDDHYLLGKGSGT 659
I AT S D+ V LWDLR ++ ++ S K + V +SP + +L SGT
Sbjct: 288 ILATGSADKTVALWDLRNLKLK-LHSFESHKDEIFQVQWSPHNETILAS-SGT 338
Score = 41.6 bits (96), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 63/132 (47%), Gaps = 9/132 (6%)
Query: 496 GAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTS 555
G V + W + S + +D+ L ++D R S A T ++
Sbjct: 225 GHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTA------EVNC 278
Query: 556 VHVNSMDELFLASGYS-KNIALYDI-NSGRRLQVFADMHKEHINVVKFSNHSPSIFATSS 613
+ N E LA+G + K +AL+D+ N +L F + HK+ I V++S H+ +I A+S
Sbjct: 279 LSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF-ESHKDEIFQVQWSPHNETILASSG 337
Query: 614 FDQDVKLWDLRQ 625
D+ + +WDL +
Sbjct: 338 TDRRLNVWDLSK 349
>sp|Q09028|RBBP4_HUMAN Histone-binding protein RBBP4 OS=Homo sapiens GN=RBBP4 PE=1 SV=3
Length = 425
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 101/233 (43%), Gaps = 24/233 (10%)
Query: 440 LTVSGNHMGDENRSFRPRQFEYHPSISCLMVFGTLDGEIVVVNHENENIVSYIPSF---- 495
+ + NH G+ NR+ Y P C++ T +++V ++ ++ PS
Sbjct: 117 IEIKINHEGEVNRA------RYMPQNPCIIATKTPSSDVLVFDY-TKHPSKPDPSGECNP 169
Query: 496 -----GAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEF 550
G GL W L++ SD+ ++ L+DI +P G A T+
Sbjct: 170 DLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPK--EGKVVDAKTIFTGHT 227
Query: 551 DQLTSVHVNSMDE-LFLASGYSKNIALYDI--NSGRRLQVFADMHKEHINVVKFSNHSPS 607
+ V + + E LF + + + ++D N+ + D H +N + F+ +S
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEF 287
Query: 608 IFATSSFDQDVKLWDLRQKPIQPCYTASSSKGNVM-VCFSPDDHYLLGKGSGT 659
I AT S D+ V LWDLR ++ ++ S K + V +SP + +L SGT
Sbjct: 288 ILATGSADKTVALWDLRNLKLK-LHSFESHKDEIFQVQWSPHNETILAS-SGT 338
Score = 41.6 bits (96), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 63/132 (47%), Gaps = 9/132 (6%)
Query: 496 GAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTS 555
G V + W + S + +D+ L ++D R S A T ++
Sbjct: 225 GHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTA------EVNC 278
Query: 556 VHVNSMDELFLASGYS-KNIALYDI-NSGRRLQVFADMHKEHINVVKFSNHSPSIFATSS 613
+ N E LA+G + K +AL+D+ N +L F + HK+ I V++S H+ +I A+S
Sbjct: 279 LSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF-ESHKDEIFQVQWSPHNETILASSG 337
Query: 614 FDQDVKLWDLRQ 625
D+ + +WDL +
Sbjct: 338 TDRRLNVWDLSK 349
>sp|Q3MHL3|RBBP4_BOVIN Histone-binding protein RBBP4 OS=Bos taurus GN=RBBP4 PE=1 SV=3
Length = 425
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 101/233 (43%), Gaps = 24/233 (10%)
Query: 440 LTVSGNHMGDENRSFRPRQFEYHPSISCLMVFGTLDGEIVVVNHENENIVSYIPSF---- 495
+ + NH G+ NR+ Y P C++ T +++V ++ ++ PS
Sbjct: 117 IEIKINHEGEVNRA------RYMPQNPCIIATKTPSSDVLVFDY-TKHPSKPDPSGECNP 169
Query: 496 -----GAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEF 550
G GL W L++ SD+ ++ L+DI +P G A T+
Sbjct: 170 DLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPK--EGKVVDAKTIFTGHT 227
Query: 551 DQLTSVHVNSMDE-LFLASGYSKNIALYDI--NSGRRLQVFADMHKEHINVVKFSNHSPS 607
+ V + + E LF + + + ++D N+ + D H +N + F+ +S
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEF 287
Query: 608 IFATSSFDQDVKLWDLRQKPIQPCYTASSSKGNVM-VCFSPDDHYLLGKGSGT 659
I AT S D+ V LWDLR ++ ++ S K + V +SP + +L SGT
Sbjct: 288 ILATGSADKTVALWDLRNLKLK-LHSFESHKDEIFQVQWSPHNETILAS-SGT 338
Score = 41.6 bits (96), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 63/132 (47%), Gaps = 9/132 (6%)
Query: 496 GAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTS 555
G V + W + S + +D+ L ++D R S A T ++
Sbjct: 225 GHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTA------EVNC 278
Query: 556 VHVNSMDELFLASGYS-KNIALYDI-NSGRRLQVFADMHKEHINVVKFSNHSPSIFATSS 613
+ N E LA+G + K +AL+D+ N +L F + HK+ I V++S H+ +I A+S
Sbjct: 279 LSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF-ESHKDEIFQVQWSPHNETILASSG 337
Query: 614 FDQDVKLWDLRQ 625
D+ + +WDL +
Sbjct: 338 TDRRLNVWDLSK 349
>sp|Q5ZJL7|DDB2_CHICK DNA damage-binding protein 2 OS=Gallus gallus GN=DDB2 PE=2 SV=1
Length = 507
Score = 50.4 bits (119), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 73/166 (43%), Gaps = 2/166 (1%)
Query: 459 FEYHPSISCLMVFGTLDGEIVVVNHENENIVSYIPSFGAMNSVLGLCWLKKYPSKLIAGS 518
E+HP+ + G+ G+I++ ++E +I G +S+ + + KL S
Sbjct: 130 LEWHPTHPSTVAVGSKGGDIILWDYEVLTKTCFIKGKGPGDSLGDIKFSPYEAVKLYVAS 189
Query: 519 DNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASGYSKNIALYD 578
+G+L L D+ + G + SV V++ + N+ L
Sbjct: 190 GDGTLSLQDLEGRAVQVISRAPDCGHENHNVCCWYCSVDVSASCRAVVTGDNLGNVVLLS 249
Query: 579 INSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVKLWDLR 624
SG + +HK+ + V+F++ + AT+S DQ VK+WDLR
Sbjct: 250 -TSGEEIWKL-KLHKKKVTHVEFNSRCEWLLATASVDQTVKIWDLR 293
>sp|Q9W7I5|RBBP4_CHICK Histone-binding protein RBBP4 OS=Gallus gallus GN=RBBP4 PE=1 SV=3
Length = 425
Score = 50.4 bits (119), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 101/233 (43%), Gaps = 24/233 (10%)
Query: 440 LTVSGNHMGDENRSFRPRQFEYHPSISCLMVFGTLDGEIVVVNHENENIVSYIPSF---- 495
+ + NH G+ NR+ Y P C++ T +++V ++ ++ PS
Sbjct: 117 IEIKINHEGEVNRA------RYMPQNPCIIATKTPSSDVLVFDY-TKHPSKPDPSGECNP 169
Query: 496 -----GAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEF 550
G GL W L++ SD+ ++ L+DI +P G A T+
Sbjct: 170 DLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPK--EGKVVDAKTIFTGHT 227
Query: 551 DQLTSVHVNSMDE-LFLASGYSKNIALYDI--NSGRRLQVFADMHKEHINVVKFSNHSPS 607
+ V + + E LF + + + ++D N+ + D H +N + F+ +S
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEF 287
Query: 608 IFATSSFDQDVKLWDLRQKPIQPCYTASSSKGNVM-VCFSPDDHYLLGKGSGT 659
I AT S D+ V LWDLR ++ ++ S K + V +SP + +L SGT
Sbjct: 288 ILATGSADKTVALWDLRNLKLK-LHSFESHKDEIFQVQWSPHNETILAS-SGT 338
Score = 41.6 bits (96), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 63/132 (47%), Gaps = 9/132 (6%)
Query: 496 GAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTS 555
G V + W + S + +D+ L ++D R S A T ++
Sbjct: 225 GHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTA------EVNC 278
Query: 556 VHVNSMDELFLASGYS-KNIALYDI-NSGRRLQVFADMHKEHINVVKFSNHSPSIFATSS 613
+ N E LA+G + K +AL+D+ N +L F + HK+ I V++S H+ +I A+S
Sbjct: 279 LSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF-ESHKDEIFQVQWSPHNETILASSG 337
Query: 614 FDQDVKLWDLRQ 625
D+ + +WDL +
Sbjct: 338 TDRRLNVWDLSK 349
>sp|Q9BQ67|GRWD1_HUMAN Glutamate-rich WD repeat-containing protein 1 OS=Homo sapiens
GN=GRWD1 PE=1 SV=1
Length = 446
Score = 50.4 bits (119), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 94/218 (43%), Gaps = 35/218 (16%)
Query: 489 VSYIPSFGAMNSVLGLCWLKKYPSKLIAG--SDNGSLKLYDIRHMPPSIRGMHYGAGTVT 546
++ +P +G +N V + WL + P +AG S+ G ++++ +R + ++ +
Sbjct: 143 LAMVPHYGGINRVR-VSWLGEEP---VAGVWSEKGQVEVFALRRL---LQVVEEPQALAA 195
Query: 547 F--DEFDQLTSVH--VNSMDELF------------LASGYSKNIALYDINSGRRLQVFAD 590
F DE Q+ + M E F L KNI L+ G V
Sbjct: 196 FLRDEQAQMKPIFSFAGHMGEGFALDWSPRVTGRLLTGDCQKNIHLWTPTDGGSWHVDQR 255
Query: 591 MHKEHINVVKFSNHSPS---IFATSSFDQDVKLWDLRQKPIQPCY--TASSSKGNV-MVC 644
H V+ SP+ +FA+ S D +++WD+R P + C TA++ G+V ++
Sbjct: 256 PFVGHTRSVEDLQWSPTENTVFASCSADASIRIWDIRAAPSKACMLTTATAHDGDVNVIS 315
Query: 645 FSPDDHYLLGKGSGTSMFVQSLR----GDPFRDFNMSI 678
+S + +LL G ++ + LR G P F +
Sbjct: 316 WSRREPFLLSGGDDGALKIWDLRQFKSGSPVATFKQHV 353
>sp|Q5RF92|RBBP4_PONAB Histone-binding protein RBBP4 OS=Pongo abelii GN=RBBP4 PE=2 SV=3
Length = 425
Score = 50.4 bits (119), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 101/233 (43%), Gaps = 24/233 (10%)
Query: 440 LTVSGNHMGDENRSFRPRQFEYHPSISCLMVFGTLDGEIVVVNHENENIVSYIPSF---- 495
+ + NH G+ NR+ Y P C++ T +++V ++ ++ PS
Sbjct: 117 IEIKINHEGEVNRA------RYMPQNPCIIATKTPSSDVLVFDY-TKHPSKPDPSGECNP 169
Query: 496 -----GAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEF 550
G GL W L++ SD+ ++ L+DI +P G A T+
Sbjct: 170 DLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPK--EGKVVDAKTIFTGHT 227
Query: 551 DQLTSVHVNSMDE-LFLASGYSKNIALYDI--NSGRRLQVFADMHKEHINVVKFSNHSPS 607
+ V + + E LF + + + ++D N+ + D H +N + F+ +S
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEF 287
Query: 608 IFATSSFDQDVKLWDLRQKPIQPCYTASSSKGNVM-VCFSPDDHYLLGKGSGT 659
I AT S D+ V LWDLR ++ ++ S K + V +SP + +L SGT
Sbjct: 288 ILATGSADKTVALWDLRNLKLK-LHSFESHKDEIFQVQWSPHNETILAS-SGT 338
Score = 41.6 bits (96), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 63/132 (47%), Gaps = 9/132 (6%)
Query: 496 GAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTS 555
G V + W + S + +D+ L ++D R S A T ++
Sbjct: 225 GHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTA------EVNC 278
Query: 556 VHVNSMDELFLASGYS-KNIALYDI-NSGRRLQVFADMHKEHINVVKFSNHSPSIFATSS 613
+ N E LA+G + K +AL+D+ N +L F + HK+ I V++S H+ +I A+S
Sbjct: 279 LSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF-ESHKDEIFQVQWSPHNETILASSG 337
Query: 614 FDQDVKLWDLRQ 625
D+ + +WDL +
Sbjct: 338 TDRRLNVWDLSK 349
>sp|Q5RDY7|GBB5_PONAB Guanine nucleotide-binding protein subunit beta-5 OS=Pongo abelii
GN=GNB5 PE=2 SV=1
Length = 353
Score = 50.1 bits (118), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 79/181 (43%), Gaps = 17/181 (9%)
Query: 461 YHPSISCLMVFGTLDGEIVV---VNHENENIVSYIPSFGAMNSVLGLCWLKKYPSKLIAG 517
Y PS C + G LD + V +NEN+ + S + L C +++
Sbjct: 113 YAPS-GCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTA 171
Query: 518 SDNGSLKLYDIR--HMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASGYSKNIA 575
S +G+ L+D+ + S G +GA + D + + F++ G K
Sbjct: 172 SGDGTCALWDVESGQLLQSFHG--HGADVLCLD-------LAPSETGNTFVSGGCDKKAM 222
Query: 576 LYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVKLWDLRQKPIQPCYTAS 635
++D+ SG+ +Q F + H+ IN V++ S FA+ S D +L+DLR Y+
Sbjct: 223 VWDMRSGQCVQAF-ETHESDINSVRYYP-SGDAFASGSDDATCRLYDLRADREVAIYSKE 280
Query: 636 S 636
S
Sbjct: 281 S 281
>sp|Q6INH0|RBP4B_XENLA Histone-binding protein RBBP4-B OS=Xenopus laevis GN=rbbp4-b PE=1
SV=3
Length = 425
Score = 50.1 bits (118), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 101/233 (43%), Gaps = 24/233 (10%)
Query: 440 LTVSGNHMGDENRSFRPRQFEYHPSISCLMVFGTLDGEIVVVNHENENIVSYIPSF---- 495
+ + NH G+ NR+ Y P C++ T +++V ++ ++ PS
Sbjct: 117 IEIKINHEGEVNRA------RYMPQNPCIIATKTPSCDVLVFDY-TKHPSKPDPSGECNP 169
Query: 496 -----GAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEF 550
G GL W L++ SD+ ++ L+DI +P G A T+
Sbjct: 170 DLRLRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISAVPK--EGKVVDAKTIFTGHT 227
Query: 551 DQLTSVHVNSMDE-LFLASGYSKNIALYDI--NSGRRLQVFADMHKEHINVVKFSNHSPS 607
+ V + + E LF + + + ++D N+ + D H +N + F+ +S
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEF 287
Query: 608 IFATSSFDQDVKLWDLRQKPIQPCYTASSSKGNVM-VCFSPDDHYLLGKGSGT 659
I AT S D+ V LWDLR ++ ++ S K + V +SP + +L SGT
Sbjct: 288 ILATGSADKTVALWDLRNLKLK-LHSFESHKDEIFQVQWSPHNETILA-SSGT 338
Score = 41.6 bits (96), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 63/132 (47%), Gaps = 9/132 (6%)
Query: 496 GAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTS 555
G V + W + S + +D+ L ++D R S A T ++
Sbjct: 225 GHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTA------EVNC 278
Query: 556 VHVNSMDELFLASGYS-KNIALYDI-NSGRRLQVFADMHKEHINVVKFSNHSPSIFATSS 613
+ N E LA+G + K +AL+D+ N +L F + HK+ I V++S H+ +I A+S
Sbjct: 279 LSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF-ESHKDEIFQVQWSPHNETILASSG 337
Query: 614 FDQDVKLWDLRQ 625
D+ + +WDL +
Sbjct: 338 TDRRLNVWDLSK 349
>sp|Q80ZD0|GBB5_TAMST Guanine nucleotide-binding protein subunit beta-5 OS=Tamias
striatus GN=GNB5 PE=2 SV=1
Length = 353
Score = 50.1 bits (118), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 79/181 (43%), Gaps = 17/181 (9%)
Query: 461 YHPSISCLMVFGTLDGEIVV---VNHENENIVSYIPSFGAMNSVLGLCWLKKYPSKLIAG 517
Y PS C + G LD + V +NEN+ + S + L C +++
Sbjct: 113 YAPS-GCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTA 171
Query: 518 SDNGSLKLYDIR--HMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASGYSKNIA 575
S +G+ L+D+ + S G +GA + D + + F++ G K
Sbjct: 172 SGDGTCALWDVESGQLLQSFHG--HGADVLCLD-------LAPSETGNTFVSGGCDKKAM 222
Query: 576 LYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVKLWDLRQKPIQPCYTAS 635
++D+ SG+ +Q F + H+ IN V++ S FA+ S D +L+DLR Y+
Sbjct: 223 VWDMRSGQCVQAF-ETHESDINSVRYYP-SGDAFASGSDDATCRLYDLRADREVAIYSKE 280
Query: 636 S 636
S
Sbjct: 281 S 281
>sp|Q6PNB6|GBB5_RABIT Guanine nucleotide-binding protein subunit beta-5 OS=Oryctolagus
cuniculus GN=GNB5 PE=2 SV=1
Length = 353
Score = 49.7 bits (117), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 79/181 (43%), Gaps = 17/181 (9%)
Query: 461 YHPSISCLMVFGTLDGEIVV---VNHENENIVSYIPSFGAMNSVLGLCWLKKYPSKLIAG 517
Y PS C + G LD + V +NEN+ + S + L C +++
Sbjct: 113 YAPS-GCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTA 171
Query: 518 SDNGSLKLYDIR--HMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASGYSKNIA 575
S +G+ L+D+ + S G +GA + D + + F++ G K
Sbjct: 172 SGDGTCALWDVESGQLLQSFHG--HGADVLCLD-------LAPSETGNTFVSGGCDKKAM 222
Query: 576 LYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVKLWDLRQKPIQPCYTAS 635
++D+ SG+ +Q F + H+ IN V++ S FA+ S D +L+DLR Y+
Sbjct: 223 VWDMRSGQCVQAF-ETHESDINSVRYYP-SGDAFASGSDDATCRLYDLRADREVAIYSKE 280
Query: 636 S 636
S
Sbjct: 281 S 281
>sp|Q1JQD2|GRWD1_BOVIN Glutamate-rich WD repeat-containing protein 1 OS=Bos taurus
GN=GRWD1 PE=2 SV=1
Length = 446
Score = 49.7 bits (117), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 96/218 (44%), Gaps = 35/218 (16%)
Query: 489 VSYIPSFGAMNSVLGLCWLKKYPSKLIAG--SDNGSLKLYDIRHMPPSIRGMHYGAGTVT 546
++ +P +G +N V + WL + P +AG S+ G ++++ +R + ++ + T
Sbjct: 143 LAMVPHYGGINRVR-VSWLGEEP---VAGVWSEKGQVEVFALRRL---LQVVDDPQALAT 195
Query: 547 F--DEFDQLTSVHVNS--MDELF------------LASGYSKNIALYDINSGRRLQVFAD 590
F DE ++ + S M E F L KNI L+ G V
Sbjct: 196 FLRDEQTRMKPIFAFSGHMGEGFALDWSPRVPGRLLTGDCQKNIHLWTPTDGGSWHVDQR 255
Query: 591 MHKEHINVVKFSNHSPS---IFATSSFDQDVKLWDLRQKPIQPCY--TASSSKGNV-MVC 644
H V+ SP+ +FA+ S D +++WD+R P + C TA++ G+V ++
Sbjct: 256 PFVGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPSKACMLTTATAHDGDVNVIN 315
Query: 645 FSPDDHYLLGKGSGTSMFVQSLR----GDPFRDFNMSI 678
+S + +LL G ++ V LR G P F +
Sbjct: 316 WSHREPFLLSGGDDGALKVWDLRQFKSGSPVATFKQHV 353
>sp|Q5ZIU8|KTNB1_CHICK Katanin p80 WD40 repeat-containing subunit B1 OS=Gallus gallus
GN=KATNB1 PE=2 SV=2
Length = 657
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 7/102 (6%)
Query: 553 LTSVHVNSMDELFLASGYSKNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATS 612
+ S+ +++ +EL +A S +I ++D+ + + L+ HK +I + F + S A+
Sbjct: 66 IESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLG-HKANICSLDFHPYG-SFVASG 123
Query: 613 SFDQDVKLWDLRQKPIQPCYTASSSKGNVMVC--FSPDDHYL 652
S D D+KLWD+R+K C S + C FSPD +L
Sbjct: 124 SLDTDIKLWDVRRK---GCIFKYKSHTQAVRCLRFSPDGKWL 162
Score = 43.1 bits (100), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 69/147 (46%), Gaps = 19/147 (12%)
Query: 514 LIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASG-YSK 572
++AGS +GS++++D+ + + A + D F S F+ASG
Sbjct: 78 IVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLD-FHPYGS---------FVASGSLDT 127
Query: 573 NIALYDINSGRRLQVFADMHKEHINVVKFSNHSP--SIFATSSFDQDVKLWDLRQKPIQP 630
+I L+D+ R+ +F +K H V+ SP A+++ D VKLWDL +
Sbjct: 128 DIKLWDVR--RKGCIFK--YKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMF 183
Query: 631 CYTASSSKGNVMVCFSPDDHYLLGKGS 657
+T S NV V F P + YLL GS
Sbjct: 184 EFTGHSGPVNV-VEFHPSE-YLLASGS 208
>sp|Q24572|CAF1_DROME Probable histone-binding protein Caf1 OS=Drosophila melanogaster
GN=Caf1 PE=1 SV=1
Length = 430
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 100/236 (42%), Gaps = 30/236 (12%)
Query: 440 LTVSGNHMGDENRSFRPRQFEYHPSISCLMVFGTLDGEIVVVNH-----ENENIVSYIPS 494
+ + NH G+ NR+ Y P +C++ T +++V ++ + E P
Sbjct: 121 IEIKINHEGEVNRA------RYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPD 174
Query: 495 F---GAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIR-----GMHYGAGTVT 546
G GL W L++ SD+ ++ L+DI P R + G V
Sbjct: 175 LRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVV 234
Query: 547 FDEFDQLTSVHVNSMDELFLASGYSKNIALYDI--NSGRRLQVFADMHKEHINVVKFSNH 604
D L +H + LF + + + ++D N+ + D H +N + F+ +
Sbjct: 235 EDVAWHL--LH----ESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPY 288
Query: 605 SPSIFATSSFDQDVKLWDLRQKPIQPCYTASSSKGNVM-VCFSPDDHYLLGKGSGT 659
S I AT S D+ V LWDLR ++ ++ S K + V +SP + +L SGT
Sbjct: 289 SEFILATGSADKTVALWDLRNLKLK-LHSFESHKDEIFQVQWSPHNETILA-SSGT 342
Score = 42.7 bits (99), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 64/132 (48%), Gaps = 9/132 (6%)
Query: 496 GAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTS 555
G V + W + S + +D+ L ++D R+ S A T ++
Sbjct: 229 GHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTA------EVNC 282
Query: 556 VHVNSMDELFLASGYS-KNIALYDI-NSGRRLQVFADMHKEHINVVKFSNHSPSIFATSS 613
+ N E LA+G + K +AL+D+ N +L F + HK+ I V++S H+ +I A+S
Sbjct: 283 LSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF-ESHKDEIFQVQWSPHNETILASSG 341
Query: 614 FDQDVKLWDLRQ 625
D+ + +WDL +
Sbjct: 342 TDRRLHVWDLSK 353
>sp|Q54H44|WDR83_DICDI WD repeat domain-containing protein 83 homolog OS=Dictyostelium
discoideum GN=morg1 PE=3 SV=1
Length = 325
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 74/179 (41%), Gaps = 39/179 (21%)
Query: 465 ISCLMVFGTLDGEIVVVNHENENIVSYIPSFGAMNSVLGLCWLKKYPSKLIAGSDNGSLK 524
ISC V G + VV + NS G C ++GS + S+K
Sbjct: 4 ISCNKVLSNHSGSVTVVKY---------------NSDGGYC---------LSGSSDKSIK 39
Query: 525 LYDIRH--MPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASGYSKNIALYDINSG 582
LY++ M S YG G + V++ D L S K + +DI SG
Sbjct: 40 LYNVSKGSMIHSFEEHGYGIGDL------------VSTSDNKQLFSCAEKQLYQWDIASG 87
Query: 583 RRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVKLWDLRQKPIQPCYTASSSKGNV 641
+ ++ F + H + I V + S +F+ SS D+ VK WDLR K I P +K +
Sbjct: 88 QVIRRFQNAHNDTITSVCVNLDSTLLFSGSS-DRLVKAWDLRTKSINPVQILDDAKDTI 145
Score = 32.7 bits (73), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 52/111 (46%), Gaps = 13/111 (11%)
Query: 513 KLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGT-VTFDEFDQLTSVHVNSMDELFLASGYS 571
++I S +G ++ YD+R GT VT+++ ++SV + + F+AS
Sbjct: 182 EVITSSVDGCIRTYDVR------------MGTLVTYEDTIPISSVSITKDKKCFIASCTD 229
Query: 572 KNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVKLWD 622
+ + L DI+S L+ + + + SN S+ + S D D +++
Sbjct: 230 ETVKLIDIDSYETLKEYKGHKNKVYKINSCSNFDDSLIISGSEDNDFYIYE 280
>sp|Q8SRK1|HAT2_ENCCU Histone acetyltransferase type B subunit 2 OS=Encephalitozoon
cuniculi (strain GB-M1) GN=HAT2 PE=1 SV=1
Length = 384
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 67/163 (41%), Gaps = 18/163 (11%)
Query: 502 LGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSI------RGMHYGAGTVTFDEFDQLTS 555
GL W P +L + G + ++D+ SI R F FD+
Sbjct: 162 FGLSWNHLNPGELAGCGEGGEVCVFDVSQESSSISPTVVLRRHETAVNDCAFSFFDK--- 218
Query: 556 VHVNSMDELFLASGYSKNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFD 615
+L ++G + L+D S + + H I V+FS ++ ATSS D
Sbjct: 219 -------KLLSSAGDGGMVVLWDTRSEDCIHAIEEAHTSDILSVRFSPLDGNVIATSSCD 271
Query: 616 QDVKLWDLRQKPIQPCYT-ASSSKGNVMVCFSPDDHYLLGKGS 657
VK+WD R+ QP + SK V V +SP + +L GS
Sbjct: 272 GSVKVWD-RRSLSQPLHILLGHSKDVVSVEWSPHNDKVLASGS 313
>sp|Q17BB0|WDR12_AEDAE Ribosome biogenesis protein WDR12 homolog OS=Aedes aegypti
GN=AAEL005041 PE=3 SV=1
Length = 427
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 79/170 (46%), Gaps = 15/170 (8%)
Query: 496 GAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTS 555
G + G+ W+ + L+ S + ++K++D+ ++ G+ + F L+
Sbjct: 260 GHRECISGVQWIDD--NTLVTSSWDHTIKIWDL-----ALSGIK--SEICGHKSFFDLSY 310
Query: 556 VHVNSMDELFLASGYSKNIALYDI--NSGRRLQVFADMHKEHINVVKFSNHSPSIFATSS 613
H+N L +A+ KN+ LYD N G ++ H + + V++S + +F + +
Sbjct: 311 SHLNG---LIIAASPDKNLRLYDPKSNQGTIVKNTYLGHTQWVQSVRWSTTNEYLFVSGA 367
Query: 614 FDQDVKLWDLRQKPIQPCYTASSSKGNVMVCFSPDDHYLLGKGSGTSMFV 663
+D VKLWD R P P + + V+ C + ++L GS S+ V
Sbjct: 368 YDNHVKLWDYRS-PKAPIFELIGHEDKVLACDWSNPKFILSGGSDNSVRV 416
>sp|Q8AVH1|RBBP7_XENLA Histone-binding protein RBBP7 OS=Xenopus laevis GN=rbbp7 PE=2 SV=1
Length = 425
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 97/227 (42%), Gaps = 22/227 (9%)
Query: 445 NHMGDENRSFRPRQFEYHPSISCLMVFGTLDGEIVVVNHENENIVSYIPSF--------- 495
NH G+ NR+ Y P C++ T +++V ++ ++ PS
Sbjct: 121 NHEGEVNRA------RYMPQNPCIIATKTPSADVLVFDY-TKHPSKPDPSGECSPDLRLR 173
Query: 496 GAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTS 555
G GL W L++ SD+ ++ L+DI P + + A + +
Sbjct: 174 GHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDISAGPKEGKVVDAKAVFTGHSAVVEDVA 233
Query: 556 VHVNSMDELFLASGYSKNIALYDI--NSGRRLQVFADMHKEHINVVKFSNHSPSIFATSS 613
H+ + LF + + + ++D N+ + D H +N + F+ +S I AT S
Sbjct: 234 WHL-LHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGS 292
Query: 614 FDQDVKLWDLRQKPIQPCYTASSSKGNVM-VCFSPDDHYLLGKGSGT 659
D+ V LWDLR ++ ++ S K + V +SP + +L SGT
Sbjct: 293 ADKTVALWDLRNLKLK-LHSFESHKDEIFQVHWSPHNETILA-SSGT 337
Score = 41.2 bits (95), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 9/127 (7%)
Query: 501 VLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNS 560
V + W + S + +D+ L ++D R S A T ++ + N
Sbjct: 229 VEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTA------EVNCLSFNP 282
Query: 561 MDELFLASGYS-KNIALYDI-NSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDV 618
E LA+G + K +AL+D+ N +L F + HK+ I V +S H+ +I A+S D+ +
Sbjct: 283 YSEFILATGSADKTVALWDLRNLKLKLHSF-ESHKDEIFQVHWSPHNETILASSGTDRRL 341
Query: 619 KLWDLRQ 625
+WDL +
Sbjct: 342 NVWDLSK 348
>sp|O00628|PEX7_HUMAN Peroxisomal targeting signal 2 receptor OS=Homo sapiens GN=PEX7
PE=1 SV=1
Length = 323
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 71/159 (44%), Gaps = 7/159 (4%)
Query: 471 FGTLDGEIVVVNHENENIVSYIPSFGAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRH 530
+G +++ +E + SF + + + W + LI S +GSL+L+D
Sbjct: 40 YGIAGCGTLLILDPDEAGLRLFRSFDWNDGLFDVTWSENNEHVLITCSGDGSLQLWDTAK 99
Query: 531 MPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASGYSKNIALYDINSGRRLQVFAD 590
++ A V ++ Q ++L ++ + + + L+D G+ L F
Sbjct: 100 AAGPLQVYKEHAQEVYSVDWSQTRG------EQLVVSGSWDQTVKLWDPTVGKSLCTFRG 153
Query: 591 MHKEHINVVKFSNHSPSIFATSSFDQDVKLWDLRQKPIQ 629
H+ I +S H P FA++S DQ +++WD++ ++
Sbjct: 154 -HESIIYSTIWSPHIPGCFASASGDQTLRIWDVKAAGVR 191
Score = 34.7 bits (78), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 33/165 (20%), Positives = 66/165 (40%), Gaps = 15/165 (9%)
Query: 461 YHPSISCLMVFGTLDGEIVVVNHENENIVSYIPSFGAMNSVLGLCWLKKYPSKLIAGSDN 520
+ P I + D + + + + + IP+ A +L W K + L+ G+ +
Sbjct: 163 WSPHIPGCFASASGDQTLRIWDVKAAGVRIVIPAHQA--EILSCDWCKYNENLLVTGAVD 220
Query: 521 GSLKLYDIRHMPPSI---RGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASGYSKNIALY 577
SL+ +D+R++ + G Y V F F + + Y + +
Sbjct: 221 CSLRGWDLRNVRQPVFELLGHTYAIRRVKFSPFHA----------SVLASCSYDFTVRFW 270
Query: 578 DINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVKLWD 622
+ + L + H E + FS SP+ A S+D+ +K++D
Sbjct: 271 NFSKPDSLLETVEHHTEFTCGLDFSLQSPTQVADCSWDETIKIYD 315
>sp|Q7ZTY4|RBBP7_DANRE Histone-binding protein RBBP7 OS=Danio rerio GN=rbbp7 PE=2 SV=1
Length = 426
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 99/233 (42%), Gaps = 24/233 (10%)
Query: 440 LTVSGNHMGDENRSFRPRQFEYHPSISCLMVFGTLDGEIVVVNHENENIVSYIPSF---- 495
+ + NH G+ NR+ Y P C++ T +++ ++ ++ PS
Sbjct: 117 IEIKINHEGEVNRA------RYMPQNPCIIATKTPTSDVLAFDY-TKHPSKPDPSGDCSP 169
Query: 496 -----GAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEF 550
G GL W L++ SD+ ++ L+DI P G A T+
Sbjct: 170 DLRLRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISGAPK--EGKIVDAKTIFTGHT 227
Query: 551 DQLTSVHVNSMDE-LFLASGYSKNIALYDI--NSGRRLQVFADMHKEHINVVKFSNHSPS 607
+ V + + E LF + + + ++D N+ + D H +N + F+ +S
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEF 287
Query: 608 IFATSSFDQDVKLWDLRQKPIQPCYTASSSKGNVM-VCFSPDDHYLLGKGSGT 659
I AT S D+ V LWDLR ++ ++ S K + V +SP + +L SGT
Sbjct: 288 ILATGSADKTVALWDLRNLKLK-LHSFESHKDEIFQVQWSPHNETILA-SSGT 338
Score = 41.6 bits (96), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 63/132 (47%), Gaps = 9/132 (6%)
Query: 496 GAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTS 555
G V + W + S + +D+ L ++D R S A T ++
Sbjct: 225 GHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTA------EVNC 278
Query: 556 VHVNSMDELFLASGYS-KNIALYDI-NSGRRLQVFADMHKEHINVVKFSNHSPSIFATSS 613
+ N E LA+G + K +AL+D+ N +L F + HK+ I V++S H+ +I A+S
Sbjct: 279 LSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF-ESHKDEIFQVQWSPHNETILASSG 337
Query: 614 FDQDVKLWDLRQ 625
D+ + +WDL +
Sbjct: 338 TDRRLNVWDLSK 349
>sp|Q6P315|RBBP7_XENTR Histone-binding protein RBBP7 OS=Xenopus tropicalis GN=rbbp7 PE=2
SV=1
Length = 425
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 97/227 (42%), Gaps = 22/227 (9%)
Query: 445 NHMGDENRSFRPRQFEYHPSISCLMVFGTLDGEIVVVNHENENIVSYIPSF--------- 495
NH G+ NR+ Y P C++ T +++V ++ ++ PS
Sbjct: 121 NHEGEVNRA------RYMPQNPCIIATKTPSADVLVFDY-TKHPSKPDPSGDCSPDLRLR 173
Query: 496 GAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTS 555
G GL W L++ SD+ ++ L+DI P + + A + +
Sbjct: 174 GHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDISAGPKEGKVVDAKAIFTGHSAVVEDVA 233
Query: 556 VHVNSMDELFLASGYSKNIALYDI--NSGRRLQVFADMHKEHINVVKFSNHSPSIFATSS 613
H+ + LF + + + ++D N+ + D H +N + F+ +S I AT S
Sbjct: 234 WHL-LHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGS 292
Query: 614 FDQDVKLWDLRQKPIQPCYTASSSKGNVM-VCFSPDDHYLLGKGSGT 659
D+ V LWDLR ++ ++ S K + V +SP + +L SGT
Sbjct: 293 ADKTVALWDLRNLKLK-LHSFESHKDEIFQVHWSPHNETILA-SSGT 337
Score = 41.2 bits (95), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 9/127 (7%)
Query: 501 VLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNS 560
V + W + S + +D+ L ++D R S A T ++ + N
Sbjct: 229 VEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTA------EVNCLSFNP 282
Query: 561 MDELFLASGYS-KNIALYDI-NSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDV 618
E LA+G + K +AL+D+ N +L F + HK+ I V +S H+ +I A+S D+ +
Sbjct: 283 YSEFILATGSADKTVALWDLRNLKLKLHSF-ESHKDEIFQVHWSPHNETILASSGTDRRL 341
Query: 619 KLWDLRQ 625
+WDL +
Sbjct: 342 NVWDLSK 348
>sp|P97865|PEX7_MOUSE Peroxisomal targeting signal 2 receptor OS=Mus musculus GN=Pex7
PE=2 SV=1
Length = 318
Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 83/194 (42%), Gaps = 16/194 (8%)
Query: 439 TLTVSGNHMGDENRSFRPRQFEYHPS-ISCLMV--FGTLDGEIVVVNHENENIVSYIPSF 495
TL V G H F P Y P ++C +G ++V +NE+ + SF
Sbjct: 6 TLRVPGRH--GYAAEFSP----YLPGRLACAAAQHYGIAGCGTLLVLDQNESGLQIFRSF 59
Query: 496 GAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTS 555
+ + + W + L+ S +GSL+L+D ++ V ++ Q
Sbjct: 60 DWNDGLFDVTWSENNEHVLVTCSGDGSLQLWDTAKATGPLQVYKEHTQEVYSVDWSQTRG 119
Query: 556 VHVNSMDELFLASGYSKNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFD 615
++L ++ + + + ++D G L F H+ I +S H P FA++S D
Sbjct: 120 ------EQLVVSGSWDQTVKVWDPTVGNSLCTFRG-HESVIYSTIWSPHIPGCFASASGD 172
Query: 616 QDVKLWDLRQKPIQ 629
Q +++WD++ ++
Sbjct: 173 QTLRIWDVKTTGVR 186
>sp|Q5R654|RBBP7_PONAB Histone-binding protein RBBP7 OS=Pongo abelii GN=RBBP7 PE=3 SV=1
Length = 426
Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 75/168 (44%), Gaps = 7/168 (4%)
Query: 496 GAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTS 555
G GL W L++ SD+ ++ L+DI P + + A + +
Sbjct: 174 GHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAVFTGHSAVVEDVA 233
Query: 556 VHVNSMDELFLASGYSKNIALYDI--NSGRRLQVFADMHKEHINVVKFSNHSPSIFATSS 613
H+ + LF + + + ++D N+ + D H +N + F+ +S I AT S
Sbjct: 234 WHL-LHESLFGSVADDQKLMMWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGS 292
Query: 614 FDQDVKLWDLRQKPIQPCYTASSSKGNV--MVCFSPDDHYLLGKGSGT 659
D+ V LWDLR ++ +T S K + +V +SP + +L SGT
Sbjct: 293 ADKTVALWDLRNLKLK-LHTFESHKDEIFQVVHWSPHNETILAS-SGT 338
>sp|Q60973|RBBP7_MOUSE Histone-binding protein RBBP7 OS=Mus musculus GN=Rbbp7 PE=1 SV=1
Length = 425
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 73/172 (42%), Gaps = 16/172 (9%)
Query: 496 GAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPS-----IRGMHYGAGTVTFDEF 550
G GL W L++ SD+ ++ L+DI P + + G V D
Sbjct: 174 GHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVA 233
Query: 551 DQLTSVHVNSMDELFLASGYSKNIALYDI--NSGRRLQVFADMHKEHINVVKFSNHSPSI 608
L + LF + + + ++D N+ + D H +N + F+ +S I
Sbjct: 234 WHLLH------ESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFI 287
Query: 609 FATSSFDQDVKLWDLRQKPIQPCYTASSSKGNVM-VCFSPDDHYLLGKGSGT 659
AT S D+ V LWDLR ++ +T S K + V +SP + +L SGT
Sbjct: 288 LATGSADKTVALWDLRNLKLK-LHTFESHKDEIFQVHWSPHNETILA-SSGT 337
Score = 41.6 bits (96), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 9/127 (7%)
Query: 501 VLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNS 560
V + W + S + +D+ L ++D R S A T ++ + N
Sbjct: 229 VEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTA------EVNCLSFNP 282
Query: 561 MDELFLASGYS-KNIALYDI-NSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDV 618
E LA+G + K +AL+D+ N +L F + HK+ I V +S H+ +I A+S D+ +
Sbjct: 283 YSEFILATGSADKTVALWDLRNLKLKLHTF-ESHKDEIFQVHWSPHNETILASSGTDRRL 341
Query: 619 KLWDLRQ 625
+WDL +
Sbjct: 342 NVWDLSK 348
>sp|Q71UF4|RBBP7_RAT Histone-binding protein RBBP7 OS=Rattus norvegicus GN=Rbbp7 PE=2
SV=1
Length = 425
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 73/172 (42%), Gaps = 16/172 (9%)
Query: 496 GAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPS-----IRGMHYGAGTVTFDEF 550
G GL W L++ SD+ ++ L+DI P + + G V D
Sbjct: 174 GHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVA 233
Query: 551 DQLTSVHVNSMDELFLASGYSKNIALYDI--NSGRRLQVFADMHKEHINVVKFSNHSPSI 608
L + LF + + + ++D N+ + D H +N + F+ +S I
Sbjct: 234 WHLLH------ESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFI 287
Query: 609 FATSSFDQDVKLWDLRQKPIQPCYTASSSKGNVM-VCFSPDDHYLLGKGSGT 659
AT S D+ V LWDLR ++ +T S K + V +SP + +L SGT
Sbjct: 288 LATGSADKTVALWDLRNLKLK-LHTFESHKDEIFQVHWSPHNETILA-SSGT 337
Score = 41.6 bits (96), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 9/127 (7%)
Query: 501 VLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNS 560
V + W + S + +D+ L ++D R S A T ++ + N
Sbjct: 229 VEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTA------EVNCLSFNP 282
Query: 561 MDELFLASGYS-KNIALYDI-NSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDV 618
E LA+G + K +AL+D+ N +L F + HK+ I V +S H+ +I A+S D+ +
Sbjct: 283 YSEFILATGSADKTVALWDLRNLKLKLHTF-ESHKDEIFQVHWSPHNETILASSGTDRRL 341
Query: 619 KLWDLRQ 625
+WDL +
Sbjct: 342 NVWDLSK 348
>sp|Q4R304|RBBP7_MACFA Histone-binding protein RBBP7 OS=Macaca fascicularis GN=RBBP7 PE=2
SV=1
Length = 425
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 73/172 (42%), Gaps = 16/172 (9%)
Query: 496 GAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPS-----IRGMHYGAGTVTFDEF 550
G GL W L++ SD+ ++ L+DI P + + G V D
Sbjct: 174 GHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVA 233
Query: 551 DQLTSVHVNSMDELFLASGYSKNIALYDI--NSGRRLQVFADMHKEHINVVKFSNHSPSI 608
L + LF + + + ++D N+ + D H +N + F+ +S I
Sbjct: 234 WHLLH------ESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFI 287
Query: 609 FATSSFDQDVKLWDLRQKPIQPCYTASSSKGNVM-VCFSPDDHYLLGKGSGT 659
AT S D+ V LWDLR ++ +T S K + V +SP + +L SGT
Sbjct: 288 LATGSADKTVALWDLRNLKLK-LHTFESHKDEIFQVHWSPHNETILA-SSGT 337
Score = 41.6 bits (96), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 9/127 (7%)
Query: 501 VLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNS 560
V + W + S + +D+ L ++D R S A T ++ + N
Sbjct: 229 VEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTA------EVNCLSFNP 282
Query: 561 MDELFLASGYS-KNIALYDI-NSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDV 618
E LA+G + K +AL+D+ N +L F + HK+ I V +S H+ +I A+S D+ +
Sbjct: 283 YSEFILATGSADKTVALWDLRNLKLKLHTF-ESHKDEIFQVHWSPHNETILASSGTDRRL 341
Query: 619 KLWDLRQ 625
+WDL +
Sbjct: 342 NVWDLSK 348
>sp|Q16576|RBBP7_HUMAN Histone-binding protein RBBP7 OS=Homo sapiens GN=RBBP7 PE=1 SV=1
Length = 425
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 73/172 (42%), Gaps = 16/172 (9%)
Query: 496 GAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPS-----IRGMHYGAGTVTFDEF 550
G GL W L++ SD+ ++ L+DI P + + G V D
Sbjct: 174 GHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVA 233
Query: 551 DQLTSVHVNSMDELFLASGYSKNIALYDI--NSGRRLQVFADMHKEHINVVKFSNHSPSI 608
L + LF + + + ++D N+ + D H +N + F+ +S I
Sbjct: 234 WHLLH------ESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFI 287
Query: 609 FATSSFDQDVKLWDLRQKPIQPCYTASSSKGNVM-VCFSPDDHYLLGKGSGT 659
AT S D+ V LWDLR ++ +T S K + V +SP + +L SGT
Sbjct: 288 LATGSADKTVALWDLRNLKLK-LHTFESHKDEIFQVHWSPHNETILA-SSGT 337
Score = 41.6 bits (96), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 9/127 (7%)
Query: 501 VLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNS 560
V + W + S + +D+ L ++D R S A T ++ + N
Sbjct: 229 VEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTA------EVNCLSFNP 282
Query: 561 MDELFLASGYS-KNIALYDI-NSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDV 618
E LA+G + K +AL+D+ N +L F + HK+ I V +S H+ +I A+S D+ +
Sbjct: 283 YSEFILATGSADKTVALWDLRNLKLKLHTF-ESHKDEIFQVHWSPHNETILASSGTDRRL 341
Query: 619 KLWDLRQ 625
+WDL +
Sbjct: 342 NVWDLSK 348
>sp|Q3SWX8|RBBP7_BOVIN Histone-binding protein RBBP7 OS=Bos taurus GN=RBBP7 PE=2 SV=1
Length = 425
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 73/172 (42%), Gaps = 16/172 (9%)
Query: 496 GAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPS-----IRGMHYGAGTVTFDEF 550
G GL W L++ SD+ ++ L+DI P + + G V D
Sbjct: 174 GHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVA 233
Query: 551 DQLTSVHVNSMDELFLASGYSKNIALYDI--NSGRRLQVFADMHKEHINVVKFSNHSPSI 608
L + LF + + + ++D N+ + D H +N + F+ +S I
Sbjct: 234 WHLLH------ESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFI 287
Query: 609 FATSSFDQDVKLWDLRQKPIQPCYTASSSKGNVM-VCFSPDDHYLLGKGSGT 659
AT S D+ V LWDLR ++ +T S K + V +SP + +L SGT
Sbjct: 288 LATGSADKTVALWDLRNLKLK-LHTFESHKDEIFQVHWSPHNETILA-SSGT 337
Score = 41.2 bits (95), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 9/127 (7%)
Query: 501 VLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNS 560
V + W + S + +D+ L ++D R S A T ++ + N
Sbjct: 229 VEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTA------EVNCLSFNP 282
Query: 561 MDELFLASGYS-KNIALYDI-NSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDV 618
E LA+G + K +AL+D+ N +L F + HK+ I V +S H+ +I A+S D+ +
Sbjct: 283 YSEFILATGSADKTVALWDLRNLKLKLHTF-ESHKDEIFQVHWSPHNETILASSGTDRRL 341
Query: 619 KLWDLRQ 625
+WDL +
Sbjct: 342 NVWDLSK 348
>sp|O93377|RBP4A_XENLA Histone-binding protein RBBP4-A OS=Xenopus laevis GN=rbbp4-a PE=1
SV=3
Length = 425
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 98/227 (43%), Gaps = 24/227 (10%)
Query: 446 HMGDENRSFRPRQFEYHPSISCLMVFGTLDGEIVVVNHENENIVSYIPSF---------G 496
H G+ NR+ Y P C++ T +++V ++ ++ PS G
Sbjct: 123 HDGEVNRA------RYMPQNPCIIATKTPTSDVLVFDY-TKHPSKPDPSGECNPNLRLRG 175
Query: 497 AMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSV 556
GL W L++ SD+ ++ L+DI +P G A T+ + V
Sbjct: 176 HQKEGYGLSWNPNLSGNLLSASDDHTICLWDISAVPK--EGKVVDAKTIFTGHTAVVEDV 233
Query: 557 HVNSMDE-LFLASGYSKNIALYDI--NSGRRLQVFADMHKEHINVVKFSNHSPSIFATSS 613
+ + E LF + + + ++D N+ + D H +N + F+ +S I AT S
Sbjct: 234 SWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGS 293
Query: 614 FDQDVKLWDLRQKPIQPCYTASSSKGNVM-VCFSPDDHYLLGKGSGT 659
D+ V LWDLR ++ ++ S K + V +SP + +L SGT
Sbjct: 294 ADKTVALWDLRNLKLK-LHSFESHKDEIFQVQWSPHNETILAS-SGT 338
Score = 41.6 bits (96), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 63/132 (47%), Gaps = 9/132 (6%)
Query: 496 GAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTS 555
G V + W + S + +D+ L ++D R S A T ++
Sbjct: 225 GHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTA------EVNC 278
Query: 556 VHVNSMDELFLASGYS-KNIALYDI-NSGRRLQVFADMHKEHINVVKFSNHSPSIFATSS 613
+ N E LA+G + K +AL+D+ N +L F + HK+ I V++S H+ +I A+S
Sbjct: 279 LSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF-ESHKDEIFQVQWSPHNETILASSG 337
Query: 614 FDQDVKLWDLRQ 625
D+ + +WDL +
Sbjct: 338 TDRRLNVWDLSK 349
>sp|Q2YDS1|DDB2_DANRE DNA damage-binding protein 2 OS=Danio rerio GN=ddb2 PE=1 SV=2
Length = 496
Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 82/181 (45%), Gaps = 11/181 (6%)
Query: 455 RPRQFEYHPSISCLMVFGTLDGEIVVVNHENENIVSYIPSFGAMNSVLGLCWLKKYPSKL 514
R E+HP+ + G+ G+I++ +++ N S+I G +++ G+ + + ++L
Sbjct: 115 RVTSLEWHPTHPTTVAVGSKGGDIILWDYDVLNKTSFIQGMGPGDAITGMKFNQFNTNQL 174
Query: 515 IAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASGYSKNI 574
S G+ L D S + A T ++D + V S+ LA+G S
Sbjct: 175 FVSSIWGATTLRDF-----SGSVIQVFAKTDSWDYWYCCVDV---SVSRQMLATGDSTGR 226
Query: 575 ALYDINSGRRLQVFAD-MHKEHINVVKFSNHSPSIFATSSFDQDVKLWDLRQKPIQPCYT 633
L G ++F + +HK + +F+ + ATSS D VKLWDLR + Y
Sbjct: 227 LLLLGLDGH--EIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYI 284
Query: 634 A 634
A
Sbjct: 285 A 285
>sp|Q8R537|PEX7_CRIGR Peroxisomal targeting signal 2 receptor OS=Cricetulus griseus
GN=PEX7 PE=1 SV=1
Length = 318
Score = 47.4 bits (111), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 83/194 (42%), Gaps = 16/194 (8%)
Query: 439 TLTVSGNHMGDENRSFRPRQFEYHPS-ISCLMV--FGTLDGEIVVVNHENENIVSYIPSF 495
TL V G H F P Y P ++C +G +++ +N++ + SF
Sbjct: 6 TLRVPGRH--GYAAEFSP----YLPGRLACAAAQHYGIAGCGTLIILDQNQSGLQIFRSF 59
Query: 496 GAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTS 555
+ + + W + L+ S +GSL+L+D ++ V ++ Q
Sbjct: 60 DWSDGLFDVTWSEDNEHVLVTCSGDGSLQLWDTAKATGPLQVYKEHTQEVYSVDWSQTRG 119
Query: 556 VHVNSMDELFLASGYSKNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFD 615
++L ++ + + + ++D G L F H+ I +S H P FA++S D
Sbjct: 120 ------EQLVVSGSWDQTVKVWDPTVGNSLCTFRG-HESVIYSTIWSPHIPGCFASASGD 172
Query: 616 QDVKLWDLRQKPIQ 629
Q +++WD++ ++
Sbjct: 173 QTLRIWDVKTAGVR 186
>sp|Q9C1X0|YN55_SCHPO Uncharacterized WD repeat-containing protein C713.05
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC713.05 PE=3 SV=1
Length = 297
Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 565 FLASGYSKNIALYDINSG---RRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVKLW 621
F + G K I ++D+N+G RRL H IN +++ N SI A+ SFD V+LW
Sbjct: 71 FASCGGDKFIQVWDVNTGKVDRRL----GGHLAQINTIRY-NEDSSILASGSFDSKVRLW 125
Query: 622 DLRQKPIQPCYTASSSKGNV 641
D R P + +K +V
Sbjct: 126 DCRSNSFSPIQVLADAKDSV 145
Score = 37.0 bits (84), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 13/114 (11%)
Query: 514 LIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQ-LTSVHVNSMDELFLASGYSK 572
++ GS +G+L+ YDIR GT++ D F +TSV + L S +
Sbjct: 155 IVTGSTDGTLRTYDIR------------KGTLSSDYFSHPITSVKTSKSASFSLISSLNS 202
Query: 573 NIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVKLWDLRQK 626
+I L D +G+ L+ + + V N S +I + S D V LWDL +
Sbjct: 203 SIHLLDQETGKILKSYIGLKNMEYRVRSSFNQSETIVFSGSEDGKVYLWDLENE 256
>sp|Q54KL5|WDR5_DICDI WD repeat-containing protein 5 homolog OS=Dictyostelium discoideum
GN=wdr5 PE=3 SV=1
Length = 335
Score = 47.0 bits (110), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 69/145 (47%), Gaps = 16/145 (11%)
Query: 512 SKLI-AGSDNGSLKLYDIR--HMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLAS 568
SKLI + SD+ ++K++D+ M +++G + + V N L ++
Sbjct: 100 SKLICSASDDKTIKIWDVESGKMVKTLKGHK-----------EYVFGVSFNPQSNLIVSG 148
Query: 569 GYSKNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVKLWDLRQKPI 628
+ +N+ ++D+N+G ++ + H + + V F N ++ + S+D V++WD +
Sbjct: 149 SFDENVRIWDVNTGECTKMIS-AHSDPVTGVHF-NRDGTLVVSGSYDGTVRIWDTTTGQL 206
Query: 629 QPCYTASSSKGNVMVCFSPDDHYLL 653
+ K V FSP+ ++L
Sbjct: 207 LNTISTEDGKEVSFVKFSPNGKFVL 231
>sp|Q5RF51|SNR40_PONAB U5 small nuclear ribonucleoprotein 40 kDa protein OS=Pongo abelii
GN=SNRNP40 PE=2 SV=1
Length = 357
Score = 46.6 bits (109), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 57/123 (46%), Gaps = 14/123 (11%)
Query: 508 KKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLA 567
++ P + GSD+G++KL+DIR A TF Q+ +V N + ++
Sbjct: 161 RRGPQLVCTGSDDGTVKLWDIRKK----------AAIQTFQNTYQVLAVTFNDTSDQIIS 210
Query: 568 SGYSKNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVKLWDLRQKP 627
G +I ++D+ +L H + + + S+ S +++ D V++WD+R P
Sbjct: 211 GGIDNDIKVWDLRQ-NKLTYTMRGHADSVTGLSLSSEG-SYLLSNAMDNTVRVWDVR--P 266
Query: 628 IQP 630
P
Sbjct: 267 FAP 269
Score = 43.1 bits (100), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 556 VHVNSMDELFLASGYSKNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFD 615
+H N+ + ++ K +A++D +G R++ H +N + P + T S D
Sbjct: 115 LHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKG-HTSFVNSCYPARRGPQLVCTGSDD 173
Query: 616 QDVKLWDLRQK 626
VKLWD+R+K
Sbjct: 174 GTVKLWDIRKK 184
>sp|Q9T014|SPA2_ARATH Protein SPA1-RELATED 2 OS=Arabidopsis thaliana GN=SPA2 PE=1 SV=2
Length = 1036
Score = 46.6 bits (109), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 523 LKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLASG-YSKNIALYDINS 581
+K+Y+ + +HY A + +L+ V N+ +LAS Y + L+D+ +
Sbjct: 747 IKIYEFNSLFNESVDIHYPA--IEMPNRSKLSGVCWNNYIRNYLASSDYDGIVKLWDVTT 804
Query: 582 GRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVKLWDLRQKPIQPCYTASSSKGNV 641
G+ + F + H++ V FS P+ A+ S D VKLW++ ++ C + NV
Sbjct: 805 GQAISHFIE-HEKRAWSVDFSEACPTKLASGSDDCSVKLWNINER---NCLGTIRNIANV 860
Query: 642 -MVCFSPDDHYLLGKGS 657
V FSP +LL GS
Sbjct: 861 CCVQFSPQSSHLLAFGS 877
Score = 36.6 bits (83), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 17/118 (14%)
Query: 511 PSKLIAGSDNGSLKLYDI--RHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLAS 568
P+KL +GSD+ S+KL++I R+ +IR + + V + LA
Sbjct: 828 PTKLASGSDDCSVKLWNINERNCLGTIRNIA------------NVCCVQFSPQSSHLLAF 875
Query: 569 GYSK-NIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVKLWDLRQ 625
G S YD+ + R H + ++ KF ++ T+S D +KLWDL++
Sbjct: 876 GSSDFRTYCYDLRNLRTPWCILSGHNKAVSYAKFLDN--ETLVTASTDNTLKLWDLKK 931
>sp|Q6PE01|SNR40_MOUSE U5 small nuclear ribonucleoprotein 40 kDa protein OS=Mus musculus
GN=Snrnp40 PE=2 SV=1
Length = 358
Score = 46.2 bits (108), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 57/123 (46%), Gaps = 14/123 (11%)
Query: 508 KKYPSKLIAGSDNGSLKLYDIRHMPPSIRGMHYGAGTVTFDEFDQLTSVHVNSMDELFLA 567
++ P + GSD+G++KL+DIR A TF Q+ +V N + ++
Sbjct: 162 RRGPQLVCTGSDDGTVKLWDIRKK----------AAVQTFQNTYQVLAVTFNDTSDQIIS 211
Query: 568 SGYSKNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVKLWDLRQKP 627
G +I ++D+ +L H + + + S+ S +++ D V++WD+R P
Sbjct: 212 GGIDNDIKVWDLRQ-NKLTYTMRGHADSVTGLSLSSEG-SYLLSNAMDNTVRVWDVR--P 267
Query: 628 IQP 630
P
Sbjct: 268 FAP 270
Score = 42.7 bits (99), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 556 VHVNSMDELFLASGYSKNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFD 615
+H N+ + ++ K +A++D +G R++ H +N + P + T S D
Sbjct: 116 LHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKG-HTSFVNSCYPARRGPQLVCTGSDD 174
Query: 616 QDVKLWDLRQK 626
VKLWD+R+K
Sbjct: 175 GTVKLWDIRKK 185
Score = 37.0 bits (84), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 8/99 (8%)
Query: 574 IALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVKLWDLRQKPIQPCYT 633
+ L+DI +Q F + ++ + V F++ S I + D D+K+WDLRQ + YT
Sbjct: 177 VKLWDIRKKAAVQTFQNTYQ--VLAVTFNDTSDQII-SGGIDNDIKVWDLRQNKL--TYT 231
Query: 634 ASSSKGNVM-VCFSPDDHYLLGKGSGTSMFVQSLRGDPF 671
+V + S + YLL ++ V +R PF
Sbjct: 232 MRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVR--PF 268
>sp|P0CS32|EIF3I_CRYNJ Eukaryotic translation initiation factor 3 subunit I
OS=Cryptococcus neoformans var. neoformans serotype D
(strain JEC21 / ATCC MYA-565) GN=TIF34 PE=3 SV=1
Length = 341
Score = 46.2 bits (108), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 52/102 (50%), Gaps = 4/102 (3%)
Query: 565 FLASGY-SKNIALYDINSGRRLQVFADMHKEHINVVKFSNHSPSIFATSSFDQDVKLWDL 623
++ +G+ S IA YD+ +G +Q D H I+ ++ S + F T+S D+ +LWD+
Sbjct: 167 YIITGHESGKIAKYDVKTGEEVQAVEDEHSALISDIQLSPDG-TYFITASKDKTARLWDI 225
Query: 624 RQKPIQPCYTASSSKGNVMVCFSPDDHYLLGKGSGTSMFVQS 665
+ YT + + ++ +PD Y++ G +M V +
Sbjct: 226 ETLEVMKVYTTETPVNSAVI--TPDRPYIILGGGQDAMNVTT 265
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.134 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 267,387,599
Number of Sequences: 539616
Number of extensions: 11264119
Number of successful extensions: 27020
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 97
Number of HSP's successfully gapped in prelim test: 452
Number of HSP's that attempted gapping in prelim test: 26053
Number of HSP's gapped (non-prelim): 1195
length of query: 721
length of database: 191,569,459
effective HSP length: 125
effective length of query: 596
effective length of database: 124,117,459
effective search space: 73974005564
effective search space used: 73974005564
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)