Your job contains 1 sequence.
>004971
MKLQTIFCSLLYLLSAVFRATADEDSSSRSSIIFTTLGRSDYAFDIYTLPISDRPTTANE
IKITDGESVNFNGHFPSPSSPFLSFLLRNQTLIQSPGPQDSRDPPPLQLIYVTERNGTSN
IYYDAVYYDTRRNTRSRTALEQHGAEVSTRVQVPLLDLNEVNGGVISMKDKPILSGEYLI
YVSTHENPGTPRTSWAAVYSTELKTGLTRRLTPYGVADFSPAVSPSGKYTAVASYGNKGW
DGEVEMLSTDIYIFLTRDGTQRVKIVENGGWPCWVDESTLFFHRKSEEDDWISVYKVILP
QTGLVSTESVSIQRVTPPGLHAFTPATSPGNNKFIAVATRRPTSSYRHIELFDLVKNKFI
ELTRFVSPKTHHLNPFISPDSSRVGYHKCRGGSTREDGNNQLLLENIKSPLPDISLFRFD
GSFPSFSPKGDRIAFVEFPGVYVVNSDGSNRRQVYFKNAFSTVWDPVREAVVYTSGGPEF
ASESSEVDIISINVDDVDGVSAVRRLTTNGKNNAFPSVSPDGKWIVFRSTRTGYKNLYIM
DAEGGEGYGLHRLTEGPWSDTMCNWSPDGEWIAFASDRDNPGSGSFEMYLIHPNGTGLRK
LIQSGSAGRANHPYFSPDGKSIVFTSDYGGISAEPISTPHQYQPYGEIFKIKLDGSDLKR
LTQNSFEDGTPAWGPRFIRPVDVEEVKNEQCAFEDCHWLNETPNQRDWGAALEPEKVQCG
V
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 004971
(721 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2036916 - symbol:AT1G21680 "AT1G21680" species... 2348 1.1e-243 1
TAIR|locus:2036982 - symbol:AT1G21670 species:3702 "Arabi... 1778 3.9e-203 2
TAIR|locus:2141405 - symbol:AT4G01870 "AT4G01870" species... 899 7.1e-103 3
UNIPROTKB|Q74H67 - symbol:tolB "Protein TolB" species:243... 186 4.4e-14 2
TIGR_CMR|GSU_0025 - symbol:GSU_0025 "tolB protein" specie... 186 4.4e-14 2
ASPGD|ASPL0000037579 - symbol:AN2818 species:162425 "Emer... 158 4.0e-11 2
UNIPROTKB|P0A855 - symbol:tolB species:83333 "Escherichia... 176 4.2e-10 1
TIGR_CMR|SPO_3109 - symbol:SPO_3109 "tolB protein, putati... 161 2.0e-08 1
TIGR_CMR|CBU_0090 - symbol:CBU_0090 "tolB protein" specie... 159 3.3e-08 1
UNIPROTKB|Q9KR11 - symbol:tolB "Protein TolB" species:243... 158 4.4e-08 1
TIGR_CMR|VC_1836 - symbol:VC_1836 "tolB protein" species:... 158 4.4e-08 1
TIGR_CMR|APH_1037 - symbol:APH_1037 "Tol-Pal system beta ... 155 8.9e-08 1
UNIPROTKB|Q0C5V5 - symbol:tolB "Protein TolB" species:228... 152 2.0e-07 1
TIGR_CMR|SO_1311 - symbol:SO_1311 "transcriptional regula... 123 1.5e-05 2
TIGR_CMR|CPS_2573 - symbol:CPS_2573 "amidohydrolase famil... 144 6.6e-05 2
ASPGD|ASPL0000061094 - symbol:AN9372 species:162425 "Emer... 128 0.00014 1
>TAIR|locus:2036916 [details] [associations]
symbol:AT1G21680 "AT1G21680" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
"extracellular region" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0005773 "vacuole"
evidence=IDA] [GO:0005774 "vacuolar membrane" evidence=IDA]
[GO:0009505 "plant-type cell wall" evidence=IDA] [GO:0019243
"methylglyoxal catabolic process to D-lactate" evidence=RCA]
InterPro:IPR015943 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005774 Gene3D:2.130.10.10 GO:GO:0009505 EMBL:AC007727
InterPro:IPR011659 Pfam:PF07676 eggNOG:COG0823
ProtClustDB:CLSN2685543 EMBL:AY046036 EMBL:AY142688 IPI:IPI00537881
PIR:A86350 RefSeq:NP_564147.1 UniGene:At.20376
ProteinModelPortal:Q9XI10 SMR:Q9XI10 STRING:Q9XI10 PaxDb:Q9XI10
PRIDE:Q9XI10 EnsemblPlants:AT1G21680.1 GeneID:838770
KEGG:ath:AT1G21680 TAIR:At1g21680 HOGENOM:HOG000240011
InParanoid:Q9XI10 OMA:EWIAFAS PhylomeDB:Q9XI10 ArrayExpress:Q9XI10
Genevestigator:Q9XI10 Uniprot:Q9XI10
Length = 706
Score = 2348 (831.6 bits), Expect = 1.1e-243, P = 1.1e-243
Identities = 452/702 (64%), Positives = 537/702 (76%)
Query: 7 FCSLLYLLSAVFRATADEDSSSRSSIIFTTLGRSDYAFDIYTLPISDRPTTANEIKITDG 66
F SLL L + ++ +IIFTTLGRS Y FDI+ L + P+ + E++ITDG
Sbjct: 9 FASLLLRLHLSTAEHQNSNAGDGDTIIFTTLGRSHYEFDIFALSTTQPPSVSGELRITDG 68
Query: 67 ESVNFNGHXXXXXXXXXXXXXRNQTLIQSPGPQDSRDPPPLQLIYVTERNGTSNIYYDAV 126
ESVNFNG+ ++TLIQ +DS PL LIYVTERNGTS++YYD V
Sbjct: 69 ESVNFNGYFPSPSPALLSLLP-DETLIQM---EDSS---PLHLIYVTERNGTSSLYYDLV 121
Query: 127 YY-DTRRNTRSRTALEQHGAEVSTRVQVPLLD-LNEVNGGVI-SMKDKPILSGEYLIYVS 183
Y ++ T+ R+ LE +RVQVPLL + ++G + S KDKP LSGE+++YVS
Sbjct: 122 YGGNSDFKTKRRSVLE-----APSRVQVPLLSRFDHLSGMTVNSFKDKPSLSGEFIVYVS 176
Query: 184 THENPGTPRTSWAAVYSTELKTGLTRRLTPYGVADFSPAVSPSGKYTAVASYGNKGWDGE 243
THE+ G PR SW AVYSTELKTGLTRRLTP GVADFSPAVSPSG TAVASYG +GW GE
Sbjct: 177 THESSGEPRASWTAVYSTELKTGLTRRLTPSGVADFSPAVSPSGNLTAVASYGERGWTGE 236
Query: 244 VEMLSTDIYIFLTRDGTQRVKIVENGGWPCWVDESTLFFHRKSEEDDWISVYKVILPQTG 303
VE L TDIY+FLTRDG+ RVK+VE+GGWPCWVDESTL+FHR+SEED WISVY+ ILP+ G
Sbjct: 237 VEELRTDIYVFLTRDGSHRVKVVEHGGWPCWVDESTLYFHRRSEEDGWISVYRAILPENG 296
Query: 304 LVSTESVSIQRVTPPGLHAFTPATSPGNNKFIAVATRRPTSSYRHIELFDLVKNKFIELT 363
++TESV+IQRVTPPG+HAFTPATSP N++F+AVATRRP S YRH+ELFDL +N+FIELT
Sbjct: 297 PLTTESVTIQRVTPPGVHAFTPATSPNNHEFVAVATRRPGSDYRHVELFDLKRNEFIELT 356
Query: 364 RFVSPKTHHLNPFISPDSSRVGYHKCRGGSTREDGNNQLLLENIKSPLPDISLFRFDGSF 423
R V+PK+HHLNPF+SPDSSRVGYH CRG + + L LENI++ D+SLFR DGSF
Sbjct: 357 RLVAPKSHHLNPFLSPDSSRVGYHSCRGDANGRR-SPLLFLENIQTTTRDLSLFRIDGSF 415
Query: 424 PSFSPKGDRIAFVEFPGVYVVNSDGSNRRQVYFKNAFSTVWDPVREAVVYTSGGPEFAXX 483
PSFSP GDRIA+V+ PGV+VV DGS +R+VY AFST WDPVR +VY+S GP FA
Sbjct: 416 PSFSPGGDRIAYVKMPGVFVVKPDGSGQREVYKGMAFSTAWDPVRPGIVYSSSGPTFATE 475
Query: 484 XXXXXXXXXXXXXXXXXXAVRRLTTNGKNNAFPSVSPDGKWIVFRSTRTGYKNLYIMDAE 543
+VRRLTTNGKNNAFP SPDGK IVFRS RTG+KNLYIMDAE
Sbjct: 476 RTEVDVISIDVDAADKSSSVRRLTTNGKNNAFPWPSPDGKRIVFRSGRTGHKNLYIMDAE 535
Query: 544 GGEGYGLHRLTEGPWSDTMCNWSPDGEWIAFASDRDNPGSGSFEMYLIHPNGTGLRKLIQ 603
GE GL RLTEG W+DTMCNWSPDGEWIAFASDR++PGSGSFE++LIHPNGTGLRKLIQ
Sbjct: 536 KGESGGLWRLTEGAWTDTMCNWSPDGEWIAFASDRESPGSGSFELFLIHPNGTGLRKLIQ 595
Query: 604 SGSAGRANHPYFSPDGKSIVFTSDYGGISAEPISTPHQYQPYGEIFKIKLDGSDLKRLTQ 663
SG+ GR NHP FSPD KS+VFTSDY GISAEPIS PH YQPYG+IF +KLDGS+++RLT
Sbjct: 596 SGTGGRTNHPIFSPDSKSLVFTSDYAGISAEPISNPHHYQPYGDIFTVKLDGSNVRRLTH 655
Query: 664 NSFEDGTPAWGPRFIRPVDVE-EVKNE-QCAFEDCHWLNETP 703
NS+EDGTPAW PRFI P +VE + +N+ +C+FEDCHWLN+ P
Sbjct: 656 NSYEDGTPAWAPRFIHPNNVELQRRNDSRCSFEDCHWLNKYP 697
>TAIR|locus:2036982 [details] [associations]
symbol:AT1G21670 species:3702 "Arabidopsis thaliana"
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005618 "cell
wall" evidence=IDA] [GO:0009505 "plant-type cell wall"
evidence=IDA] [GO:0019243 "methylglyoxal catabolic process to
D-lactate" evidence=RCA] InterPro:IPR015943 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:2.130.10.10 GO:GO:0009505
EMBL:AC007727 InterPro:IPR011659 Pfam:PF07676 eggNOG:COG0823
ProtClustDB:CLSN2685543 HOGENOM:HOG000240011 EMBL:AY035079
EMBL:BT000981 IPI:IPI00534167 PIR:H86349 RefSeq:NP_564146.1
UniGene:At.11463 ProteinModelPortal:Q9XI11 SMR:Q9XI11 STRING:Q9XI11
PaxDb:Q9XI11 PRIDE:Q9XI11 ProMEX:Q9XI11 EnsemblPlants:AT1G21670.1
GeneID:838769 KEGG:ath:AT1G21670 TAIR:At1g21670 InParanoid:Q9XI11
OMA:NDTIATW PhylomeDB:Q9XI11 ArrayExpress:Q9XI11
Genevestigator:Q9XI11 Uniprot:Q9XI11
Length = 703
Score = 1778 (630.9 bits), Expect = 3.9e-203, Sum P(2) = 3.9e-203
Identities = 356/606 (58%), Positives = 424/606 (69%)
Query: 104 PPPLQLIYVTERNGTSNIYYDAVYYDTRRNTRSRTALEQHGAEVSTRVQVPLLDLNEVNG 163
P + LIYVTER GT ++ YD V+ D V +R+QVPL E
Sbjct: 97 PQDVHLIYVTERAGTPSLNYDVVHSDN----------------VGSRIQVPLFSGEEQQS 140
Query: 164 G--VISMKDKPILSGEYLIYVSTHENPGTPRTSWAAVYSTELKTGLTRRLTPYGVADFSP 221
G V SMKD P+L+ YL++VSTHENPG P SWAAVYSTEL+T TRRLTP G+ADFSP
Sbjct: 141 GMNVNSMKDTPVLTNGYLVHVSTHENPGKPMASWAAVYSTELRTKSTRRLTPLGIADFSP 200
Query: 222 AVSPSGKYTAVASYGNKGWDGE-VEM-LSTDIYIFLTRDGTQRVKIVENGGWPCWVDEST 279
AVSPSGK+TAVAS+G KGW VE +S+D+Y+FLT+DGTQRVK+VE GGWP WVD+ST
Sbjct: 201 AVSPSGKWTAVASFGEKGWTWSMVEKEISSDVYVFLTQDGTQRVKVVEQGGWPRWVDDST 260
Query: 280 LFFHRKSEEDDWISVYKVILPQTGLVSTESVSIQRVTPPGLHAFTPATSPGNNKFIAVAT 339
L+FHRKS+ D WISVY+ ILP+TG V+T+SV+IQRVTPPGLHAFTPATSP NN FIAVAT
Sbjct: 261 LYFHRKSD-DGWISVYRAILPKTGPVTTKSVTIQRVTPPGLHAFTPATSPNNNNFIAVAT 319
Query: 340 RRPTSSYRHIELFDLVKNKFIELTRFVSPKTHHLNPFISPDSSRVGYHKCRGGST-REDG 398
RRP S RH+ELFDL KN+F+ELTR VSPK+HH NPF+SPDSSRVGYH CRG +T R+
Sbjct: 320 RRPGSEIRHVELFDLKKNEFVELTRLVSPKSHHFNPFLSPDSSRVGYHSCRGDATGRKTP 379
Query: 399 NNQLLLENIKSPLPDISLFRFDGSFPSFSPKGDRIAFVEFPGVYVVNSDGSNRRQVYFKN 458
N LL+++K+ D+SLFRFDG+FPS SP+GDR AFV F GV+VVN DGS RQ+ +
Sbjct: 380 RN--LLQSLKTTSNDLSLFRFDGAFPSISPEGDRFAFVSFTGVFVVNPDGSGLRQLLPQM 437
Query: 459 AFSTVWDPVREAVVYTSGGPEFAXXXXXXXXXXXXXXXXXXXXAVRRLTTNGKNNAFPSV 518
F TVWDP+R +VYTS GP A AV++LTT G+NNAFP
Sbjct: 438 GFGTVWDPIRHGIVYTSSGPALAPGKSQIDILAINVDAPSPATAVKKLTTTGENNAFPWP 497
Query: 519 SPDGKWIVFRSTRTGYKNLYIMDAEGGEGYGLHRLTEGPWSDTMCNWSPDGEWIAFASDR 578
SPDGK IVFRS R+G KNLYIMDAE GE GL RLT G W+DT+ WSPDG WI FAS+R
Sbjct: 498 SPDGKRIVFRSARSGTKNLYIMDAEKGESGGLFRLTNGNWNDTIATWSPDGNWIVFASNR 557
Query: 579 DNPGSGSFEMYLIHPNGTGLRKLIQSGSAGRANHPYFSPDGKSIVFTSDYGGISAEPIST 638
+ PG+ +Y++HP+GTGLRKL Q+ + + HP FSPD K IVFT+ Y GISAE I
Sbjct: 558 EFPGTLLMNIYVVHPDGTGLRKLAQNLTGLVSMHPMFSPDSKRIVFTTIYAGISAEQIGN 617
Query: 639 PHQYQPYGEIFKIKLDGSDLKRLTQNSFEDGTPAWGPRFIRPVDVEEVKN--EQCAFEDC 696
PH P EIF + LDGS L RLT NS EDG P W P+ DV K C+ +D
Sbjct: 618 PHFNVPSSEIFTVNLDGSGLTRLTHNSVEDGPPMWFPKIKATGDVAWPKRFGPSCSIQDF 677
Query: 697 HWLNET 702
N T
Sbjct: 678 KTQNTT 683
Score = 210 (79.0 bits), Expect = 3.9e-203, Sum P(2) = 3.9e-203
Identities = 61/164 (37%), Positives = 89/164 (54%)
Query: 1 MKLQT--IFCSLLYLLSAVFRATADEDSSSRSSIIFTTLGRSDYAFDIYTLPISDRPTT- 57
MKL F L+ LLS ++ S+ S+I+FTT+GR + FDI+TLP S RP +
Sbjct: 1 MKLTNALFFFFLICLLSLSSASSNKPQLSNGSTILFTTIGRPTFEFDIFTLPTSHRPPSP 60
Query: 58 ANEIKITDGESVNFNGHXXXXXXXXXXXXXRNQTLIQSPGPQDSRDPPPLQLIYVTERNG 117
A+E ++TDG+S+NFNG+ + +T IQ PQD + LIYVTER G
Sbjct: 61 ADEHRLTDGKSINFNGYFASPSTALISLLPK-RTQIQ---PQD------VHLIYVTERAG 110
Query: 118 TSNIYYDAVYYDTRRNTRSRTAL-----EQHGAEVSTRVQVPLL 156
T ++ YD V+ D +R + L +Q G V++ P+L
Sbjct: 111 TPSLNYDVVHSDNV-GSRIQVPLFSGEEQQSGMNVNSMKDTPVL 153
>TAIR|locus:2141405 [details] [associations]
symbol:AT4G01870 "AT4G01870" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0009407 "toxin catabolic process" evidence=RCA] [GO:0009723
"response to ethylene stimulus" evidence=RCA] [GO:0009738 "abscisic
acid mediated signaling pathway" evidence=RCA] [GO:0010583
"response to cyclopentenone" evidence=RCA] [GO:0019243
"methylglyoxal catabolic process to D-lactate" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
InterPro:IPR002469 InterPro:IPR015943 Pfam:PF00930 EMBL:CP002687
GO:GO:0016020 Gene3D:2.130.10.10 Gene3D:2.120.10.30
InterPro:IPR011042 GO:GO:0006508 EMBL:AC007138 EMBL:AL161493
InterPro:IPR011659 Pfam:PF07676 EMBL:BT006171 EMBL:AK227106
IPI:IPI00529115 PIR:A85024 RefSeq:NP_192096.1 UniGene:At.19803
ProteinModelPortal:Q9SYI5 SMR:Q9SYI5 STRING:Q9SYI5 PRIDE:Q9SYI5
EnsemblPlants:AT4G01870.1 GeneID:828228 KEGG:ath:AT4G01870
TAIR:At4g01870 InParanoid:Q9SYI5 OMA:GYHRFRG PhylomeDB:Q9SYI5
ProtClustDB:CLSN2685543 Genevestigator:Q9SYI5 Uniprot:Q9SYI5
Length = 652
Score = 899 (321.5 bits), Expect = 7.1e-103, Sum P(3) = 7.1e-103
Identities = 202/460 (43%), Positives = 272/460 (59%)
Query: 170 DKPILS-GEYLIYVSTHENPGTPRTSWAAVYSTELKTGLTR--RLTPYGVADFSPAVSPS 226
D+PI++ L ++S HE P +W+A+Y+ EL + R+TP ADFSPAVS S
Sbjct: 90 DRPIITQNNRLYFISAHEQPDRYFKNWSALYTVELNSAKREVTRVTPPDTADFSPAVSQS 149
Query: 227 GKYTAVASYGNKGWDGEVEMLSTDIYIFLTRDGTQRVKIVENGGWPCWVDESTLFFHRKS 286
G + AVASYG + W GE ++TDI +F RV I E GGWP W +ST+FFH ++
Sbjct: 150 GDFLAVASYGTRSWGGEFHEINTDITVFKASKPETRVVICERGGWPTWSGDSTVFFHHQA 209
Query: 287 EEDDWISVYKVILPQTGLVSTE-SVSIQRVTPPGLHAFTPATSPGNNKFIAVATRRPTSS 345
+ D W S+++V +P+ T+ ++ RVTP GLH FTPA + K IA+ATRR +
Sbjct: 210 D-DGWWSIFRVDIPENFTEYTDFPITPIRVTPSGLHCFTPAAFR-DGKRIALATRRRGVN 267
Query: 346 YRHIELFDLVKNKFIELTRFVSPKTHHLNPFISPDSSRVGYHKCRGGSTREDGNNQLL-L 404
+RHIE++DL F +T ++P HH NPF+SPDS +GYH+ RG ST+ G + + +
Sbjct: 268 HRHIEIYDLENTTFQPVTESLNPSFHHYNPFVSPDSEFLGYHRFRGESTQ--GESIVPNI 325
Query: 405 ENIKSPLPDISLFRFDGSFPSFSPKGDRIAF-VEFP---GVYVVNSDGSNR-RQVYFKNA 459
E+I SP+ + L R +GSFPS SP GD IA +F G+ V SDGS R + + A
Sbjct: 326 ESIVSPIKTLRLLRINGSFPSSSPNGDLIALNSDFDINGGIKVSKSDGSKRWTLIKDRTA 385
Query: 460 FSTVWDPVREAVVYTSGGPEFAXXXXXXXXXXXXXXXXXXXXA-------VRRLTT-NGK 511
F W P V+YTS GP F+ V+ LT N
Sbjct: 386 FYNSWSPTERHVIYTSLGPIFSPARIAVQIARIKFDPSDLTADKEDLPCDVKILTLENTG 445
Query: 512 NNAFPSVSPDGKWIVFRSTRTGYKNLYIMDAEGGE--GYGLHRLTEGPWSDTMCNWSPDG 569
NNAFPS SPDGK IVFRS R+G+KNLYI+DA GE G G+ RLT+GPW DTM WSP G
Sbjct: 446 NNAFPSCSPDGKSIVFRSGRSGHKNLYIVDAVNGESNGGGIRRLTDGPWIDTMPCWSPKG 505
Query: 570 EWIAFASDRDNP-GSGSFEMYLIHPNGTGLRKLIQSGSAG 608
+ I F+S+R NP + F Y++ P+GTGLR++ SG G
Sbjct: 506 DLIGFSSNRHNPENTAVFGAYVVRPDGTGLRRIQISGPEG 545
Score = 487 (176.5 bits), Expect = 1.2e-59, Sum P(3) = 1.2e-59
Identities = 96/182 (52%), Positives = 128/182 (70%)
Query: 503 VRRLTT-NGKNNAFPSVSPDGKWIVFRSTRTGYKNLYIMDAEGGE--GYGLHRLTEGPWS 559
V+ LT N NNAFPS SPDGK IVFRS R+G+KNLYI+DA GE G G+ RLT+GPW
Sbjct: 436 VKILTLENTGNNAFPSCSPDGKSIVFRSGRSGHKNLYIVDAVNGESNGGGIRRLTDGPWI 495
Query: 560 DTMCNWSPDGEWIAFASDRDNP-GSGSFEMYLIHPNGTGLRKLIQSGSAG-------RAN 611
DTM WSP G+ I F+S+R NP + F Y++ P+GTGLR++ SG G R N
Sbjct: 496 DTMPCWSPKGDLIGFSSNRHNPENTAVFGAYVVRPDGTGLRRIQISGPEGSEEAARERVN 555
Query: 612 HPYFSPDGKSIVFTSDYGGISAEPISTPHQYQPYGEIFKIKLDGSDLKRLTQNSFEDGTP 671
H F+ DG +VF ++ G++AEP++ P+Q+QPYG+++ +KLDG+ L+RLT N +EDGTP
Sbjct: 556 HVSFNKDGDWLVFAANLSGVTAEPVTMPNQFQPYGDLYVVKLDGTGLRRLTWNGYEDGTP 615
Query: 672 AW 673
W
Sbjct: 616 TW 617
Score = 107 (42.7 bits), Expect = 7.1e-103, Sum P(3) = 7.1e-103
Identities = 22/44 (50%), Positives = 33/44 (75%)
Query: 29 RSSIIFTTLGRSDYAFDIYTLPISDRPTTANEIKITDGESVNFN 72
+ +IIFTT+GR+ Y FD+++L I+ T+ E ++TDG SVNFN
Sbjct: 5 KGTIIFTTVGRTHYGFDVFSLNIA----TSVERRLTDGVSVNFN 44
Score = 87 (35.7 bits), Expect = 7.4e-07, Sum P(3) = 7.4e-07
Identities = 41/177 (23%), Positives = 72/177 (40%)
Query: 512 NNAFPSVSPDGKWIVFRSTRTGYKNLYIMDAEGGEGYGLHRLTEGPWSDTMCNWSPDGEW 571
N +FPS SP+G I S + + ++G + + L + ++ +WSP
Sbjct: 341 NGSFPSSSPNGDLIALNSDFDINGGIKVSKSDGSKRWTLIKDRTAFYN----SWSPTERH 396
Query: 572 IAFASDRD--NPGSGSFEMYLIHPNGTGLR----------KLIQSGSAGRANHPYFSPDG 619
+ + S +P + ++ I + + L K++ + G P SPDG
Sbjct: 397 VIYTSLGPIFSPARIAVQIARIKFDPSDLTADKEDLPCDVKILTLENTGNNAFPSCSPDG 456
Query: 620 KSIVFTSDYGGISAEPISTPHQYQPYGEIFKIKLDGSDLKRLTQNSFEDGTPAWGPR 676
KSIVF S G H+ + + +G ++RLT + D P W P+
Sbjct: 457 KSIVFRSGRSG---------HKNLYIVDAVNGESNGGGIRRLTDGPWIDTMPCWSPK 504
Score = 47 (21.6 bits), Expect = 7.1e-103, Sum P(3) = 7.1e-103
Identities = 7/14 (50%), Positives = 13/14 (92%)
Query: 109 LIYVTERNGTSNIY 122
+++V+ERNG++ IY
Sbjct: 55 VVFVSERNGSARIY 68
>UNIPROTKB|Q74H67 [details] [associations]
symbol:tolB "Protein TolB" species:243231 "Geobacter
sulfurreducens PCA" [GO:0006810 "transport" evidence=ISS]
[GO:0019534 "toxin transporter activity" evidence=ISS]
HAMAP:MF_00671 InterPro:IPR007195 InterPro:IPR014167
InterPro:IPR015943 Pfam:PF04052 Gene3D:2.130.10.10 GO:GO:0019534
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0042597 GO:GO:0017038
InterPro:IPR011659 Pfam:PF07676 eggNOG:COG0823 KO:K03641
HOGENOM:HOG000004098 OMA:VREPSWG Gene3D:3.40.50.10070
SUPFAM:SSF52964 TIGRFAMs:TIGR02800 RefSeq:NP_951087.1
ProteinModelPortal:Q74H67 DNASU:2688562 GeneID:2688562
KEGG:gsu:GSU0025 PATRIC:22022787 ProtClustDB:CLSK827594
BioCyc:GSUL243231:GH27-45-MONOMER Uniprot:Q74H67
Length = 432
Score = 186 (70.5 bits), Expect = 4.4e-14, Sum P(2) = 4.4e-14
Identities = 64/237 (27%), Positives = 102/237 (43%)
Query: 396 EDGNNQLLLENIKSP-LPDISLFRFDGSFPSFSPKGDRIAFVEFPGVYVVNSDGSNRRQV 454
E GN ++ L + + ++ R P FSP G +A+ + N D RR++
Sbjct: 179 ESGNKEIYLMDYDGHNVQRLTKNRSINLNPDFSPNGRELAYTSYRRG---NPD-LFRREI 234
Query: 455 YF-KNAFSTVWDPVREAVVYTSGGPEFAXXXXXXXXXXXXXXXXXXXXAVRRLTTNGKNN 513
+ A + + ++ G + A RRLTT+ +
Sbjct: 235 FTGTEAVVSSHRGINVTGTWSPDGKQLALAMSRDGNSEIYAISRDGRDP-RRLTTHQAID 293
Query: 514 AFPSVSPDGKWIVFRSTRTGYKNLYIMDAEGGEGYGLHRLTEGPWSDTMCNWSPDGEWIA 573
P+ SPDGK I F S R G ++IM+A+G + + RLT + WSP G+ +
Sbjct: 294 VSPAWSPDGKRIAFVSDRLGKPQVFIMNADGSD---VRRLTTSGAYNVSPRWSPKGDRLV 350
Query: 574 FASDRDNPGSGSFEMYLIHPNGTGLRKLIQSGSAGRANHPYFSPDGKSIVFTSDYGG 630
+ G F++Y I +GTG +L GS HP +SPDG+ + F+S G
Sbjct: 351 YCRQE-----GGFQIYSIATDGTGDTRLTSEGSN---EHPRWSPDGRFLTFSSTRDG 399
Score = 156 (60.0 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 49/162 (30%), Positives = 76/162 (46%)
Query: 519 SPDGKWIVFRSTRTGYKNLYIMDAEGGEGYGLHRLTEGPWSDTMCNWSPDGEWIAFASDR 578
SPDGK + +R G +Y + +G + RLT D WSPDG+ IAF SDR
Sbjct: 255 SPDGKQLALAMSRDGNSEIYAISRDGRDP---RRLTTHQAIDVSPAWSPDGKRIAFVSDR 311
Query: 579 DNPGSGSFEMYLIHPNGTGLRKLIQSGSAGRANHPYFSPDGKSIVFTSDYGGISAEPIST 638
G ++++++ +G+ +R+L SG+ + P +SP G +V+ GG
Sbjct: 312 ----LGKPQVFIMNADGSDVRRLTTSGAYNVS--PRWSPKGDRLVYCRQEGGF------- 358
Query: 639 PHQYQPYGEIFKIKLDGSDLKRLTQNSFEDGTPAWGP--RFI 678
+I+ I DG+ RLT + P W P RF+
Sbjct: 359 --------QIYSIATDGTGDTRLTSEGSNEH-PRWSPDGRFL 391
Score = 152 (58.6 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 53/179 (29%), Positives = 85/179 (47%)
Query: 397 DGNNQL--LLENIKSPLPDISLFRFDGSFPSFSPKGDRIAFVEF----PGVYVVNSDGSN 450
DGN+++ + + + P + D S P++SP G RIAFV P V+++N+DGS+
Sbjct: 268 DGNSEIYAISRDGRDPRRLTTHQAIDVS-PAWSPDGKRIAFVSDRLGKPQVFIMNADGSD 326
Query: 451 RRQVYFKNAF--STVWDPVREAVVYTSGGPEFAXXXXXXXXXXXXXXXXXXXXAVRRLTT 508
R++ A+ S W P + +VY F RLT+
Sbjct: 327 VRRLTTSGAYNVSPRWSPKGDRLVYCRQEGGFQIYSIATDGTGDT-----------RLTS 375
Query: 509 NGKNNAFPSVSPDGKWIVFRSTRTGYKNLYIMDAEGGEGYGLHRLTEGPWSDTMCNWSP 567
G N P SPDG+++ F STR G + +Y+M ++G ++R ++G S WSP
Sbjct: 376 EGSNE-HPRWSPDGRFLTFSSTRDGGEAIYVMRSDGSGQTRVYR-SKGKASHP--TWSP 430
Score = 142 (55.0 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 74/280 (26%), Positives = 114/280 (40%)
Query: 320 LHAFTPATSPGNNKFIAVATRRPTSSYRHIELFDLVKNKFIELTRFVSPKTHHLNPFISP 379
+ T P K V+T S + I L D + LT+ ++ +LNP SP
Sbjct: 159 MQTMTGERGPFTGKIAFVSTE---SGNKEIYLMDYDGHNVQRLTK---NRSINLNPDFSP 212
Query: 380 DSSRVGYHKCRGGSTREDGNNQLLLENIKSPLPDI-SLFRFDGSFPSFSPKGDRIAF-VE 437
+ + Y R G N L I + + S R ++SP G ++A +
Sbjct: 213 NGRELAYTSYRRG------NPDLFRREIFTGTEAVVSSHRGINVTGTWSPDGKQLALAMS 266
Query: 438 FPG---VYVVNSDGSNRRQVYFKNAF--STVWDPVREAVVYTS---GGPEFAXXXXXXXX 489
G +Y ++ DG + R++ A S W P + + + S G P+
Sbjct: 267 RDGNSEIYAISRDGRDPRRLTTHQAIDVSPAWSPDGKRIAFVSDRLGKPQVFIMNADGSD 326
Query: 490 XXXXXXXXXXXXAVRRLTTNGKNNAFPSVSPDGKWIVFRSTRTGYKNLYIMDAEGGEGYG 549
VRRLTT+G N P SP G +V+ G++ +Y + +G G
Sbjct: 327 -------------VRRLTTSGAYNVSPRWSPKGDRLVYCRQEGGFQ-IYSIATDGT---G 369
Query: 550 LHRLT-EGPWSDTMCNWSPDGEWIAFASDRDNPGSGSFEM 588
RLT EG S+ WSPDG ++ F+S RD G + M
Sbjct: 370 DTRLTSEG--SNEHPRWSPDGRFLTFSSTRDG-GEAIYVM 406
Score = 72 (30.4 bits), Expect = 4.4e-14, Sum P(2) = 4.4e-14
Identities = 21/72 (29%), Positives = 33/72 (45%)
Query: 606 SAGRANHPYFSPDGKSIVFTSDYGGISAEPISTPHQYQPYGEIFKIKLDGSDLKRLTQNS 665
S G HP +SPDG+ + F+S G A I+ ++ DGS R+ ++
Sbjct: 375 SEGSNEHPRWSPDGRFLTFSSTRDGGEA--------------IYVMRSDGSGQTRVYRSK 420
Query: 666 FEDGTPAWGPRF 677
+ P W PR+
Sbjct: 421 GKASHPTWSPRW 432
Score = 45 (20.9 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 209 RRLTPYGVADFSPAVSPSGKYTAVASY--GN 237
+RLT + +P SP+G+ A SY GN
Sbjct: 196 QRLTKNRSINLNPDFSPNGRELAYTSYRRGN 226
>TIGR_CMR|GSU_0025 [details] [associations]
symbol:GSU_0025 "tolB protein" species:243231 "Geobacter
sulfurreducens PCA" [GO:0006810 "transport" evidence=ISS]
[GO:0019534 "toxin transporter activity" evidence=ISS]
HAMAP:MF_00671 InterPro:IPR007195 InterPro:IPR014167
InterPro:IPR015943 Pfam:PF04052 Gene3D:2.130.10.10 GO:GO:0019534
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0042597 GO:GO:0017038
InterPro:IPR011659 Pfam:PF07676 eggNOG:COG0823 KO:K03641
HOGENOM:HOG000004098 OMA:VREPSWG Gene3D:3.40.50.10070
SUPFAM:SSF52964 TIGRFAMs:TIGR02800 RefSeq:NP_951087.1
ProteinModelPortal:Q74H67 DNASU:2688562 GeneID:2688562
KEGG:gsu:GSU0025 PATRIC:22022787 ProtClustDB:CLSK827594
BioCyc:GSUL243231:GH27-45-MONOMER Uniprot:Q74H67
Length = 432
Score = 186 (70.5 bits), Expect = 4.4e-14, Sum P(2) = 4.4e-14
Identities = 64/237 (27%), Positives = 102/237 (43%)
Query: 396 EDGNNQLLLENIKSP-LPDISLFRFDGSFPSFSPKGDRIAFVEFPGVYVVNSDGSNRRQV 454
E GN ++ L + + ++ R P FSP G +A+ + N D RR++
Sbjct: 179 ESGNKEIYLMDYDGHNVQRLTKNRSINLNPDFSPNGRELAYTSYRRG---NPD-LFRREI 234
Query: 455 YF-KNAFSTVWDPVREAVVYTSGGPEFAXXXXXXXXXXXXXXXXXXXXAVRRLTTNGKNN 513
+ A + + ++ G + A RRLTT+ +
Sbjct: 235 FTGTEAVVSSHRGINVTGTWSPDGKQLALAMSRDGNSEIYAISRDGRDP-RRLTTHQAID 293
Query: 514 AFPSVSPDGKWIVFRSTRTGYKNLYIMDAEGGEGYGLHRLTEGPWSDTMCNWSPDGEWIA 573
P+ SPDGK I F S R G ++IM+A+G + + RLT + WSP G+ +
Sbjct: 294 VSPAWSPDGKRIAFVSDRLGKPQVFIMNADGSD---VRRLTTSGAYNVSPRWSPKGDRLV 350
Query: 574 FASDRDNPGSGSFEMYLIHPNGTGLRKLIQSGSAGRANHPYFSPDGKSIVFTSDYGG 630
+ G F++Y I +GTG +L GS HP +SPDG+ + F+S G
Sbjct: 351 YCRQE-----GGFQIYSIATDGTGDTRLTSEGSN---EHPRWSPDGRFLTFSSTRDG 399
Score = 156 (60.0 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 49/162 (30%), Positives = 76/162 (46%)
Query: 519 SPDGKWIVFRSTRTGYKNLYIMDAEGGEGYGLHRLTEGPWSDTMCNWSPDGEWIAFASDR 578
SPDGK + +R G +Y + +G + RLT D WSPDG+ IAF SDR
Sbjct: 255 SPDGKQLALAMSRDGNSEIYAISRDGRDP---RRLTTHQAIDVSPAWSPDGKRIAFVSDR 311
Query: 579 DNPGSGSFEMYLIHPNGTGLRKLIQSGSAGRANHPYFSPDGKSIVFTSDYGGISAEPIST 638
G ++++++ +G+ +R+L SG+ + P +SP G +V+ GG
Sbjct: 312 ----LGKPQVFIMNADGSDVRRLTTSGAYNVS--PRWSPKGDRLVYCRQEGGF------- 358
Query: 639 PHQYQPYGEIFKIKLDGSDLKRLTQNSFEDGTPAWGP--RFI 678
+I+ I DG+ RLT + P W P RF+
Sbjct: 359 --------QIYSIATDGTGDTRLTSEGSNEH-PRWSPDGRFL 391
Score = 152 (58.6 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 53/179 (29%), Positives = 85/179 (47%)
Query: 397 DGNNQL--LLENIKSPLPDISLFRFDGSFPSFSPKGDRIAFVEF----PGVYVVNSDGSN 450
DGN+++ + + + P + D S P++SP G RIAFV P V+++N+DGS+
Sbjct: 268 DGNSEIYAISRDGRDPRRLTTHQAIDVS-PAWSPDGKRIAFVSDRLGKPQVFIMNADGSD 326
Query: 451 RRQVYFKNAF--STVWDPVREAVVYTSGGPEFAXXXXXXXXXXXXXXXXXXXXAVRRLTT 508
R++ A+ S W P + +VY F RLT+
Sbjct: 327 VRRLTTSGAYNVSPRWSPKGDRLVYCRQEGGFQIYSIATDGTGDT-----------RLTS 375
Query: 509 NGKNNAFPSVSPDGKWIVFRSTRTGYKNLYIMDAEGGEGYGLHRLTEGPWSDTMCNWSP 567
G N P SPDG+++ F STR G + +Y+M ++G ++R ++G S WSP
Sbjct: 376 EGSNE-HPRWSPDGRFLTFSSTRDGGEAIYVMRSDGSGQTRVYR-SKGKASHP--TWSP 430
Score = 142 (55.0 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 74/280 (26%), Positives = 114/280 (40%)
Query: 320 LHAFTPATSPGNNKFIAVATRRPTSSYRHIELFDLVKNKFIELTRFVSPKTHHLNPFISP 379
+ T P K V+T S + I L D + LT+ ++ +LNP SP
Sbjct: 159 MQTMTGERGPFTGKIAFVSTE---SGNKEIYLMDYDGHNVQRLTK---NRSINLNPDFSP 212
Query: 380 DSSRVGYHKCRGGSTREDGNNQLLLENIKSPLPDI-SLFRFDGSFPSFSPKGDRIAF-VE 437
+ + Y R G N L I + + S R ++SP G ++A +
Sbjct: 213 NGRELAYTSYRRG------NPDLFRREIFTGTEAVVSSHRGINVTGTWSPDGKQLALAMS 266
Query: 438 FPG---VYVVNSDGSNRRQVYFKNAF--STVWDPVREAVVYTS---GGPEFAXXXXXXXX 489
G +Y ++ DG + R++ A S W P + + + S G P+
Sbjct: 267 RDGNSEIYAISRDGRDPRRLTTHQAIDVSPAWSPDGKRIAFVSDRLGKPQVFIMNADGSD 326
Query: 490 XXXXXXXXXXXXAVRRLTTNGKNNAFPSVSPDGKWIVFRSTRTGYKNLYIMDAEGGEGYG 549
VRRLTT+G N P SP G +V+ G++ +Y + +G G
Sbjct: 327 -------------VRRLTTSGAYNVSPRWSPKGDRLVYCRQEGGFQ-IYSIATDGT---G 369
Query: 550 LHRLT-EGPWSDTMCNWSPDGEWIAFASDRDNPGSGSFEM 588
RLT EG S+ WSPDG ++ F+S RD G + M
Sbjct: 370 DTRLTSEG--SNEHPRWSPDGRFLTFSSTRDG-GEAIYVM 406
Score = 72 (30.4 bits), Expect = 4.4e-14, Sum P(2) = 4.4e-14
Identities = 21/72 (29%), Positives = 33/72 (45%)
Query: 606 SAGRANHPYFSPDGKSIVFTSDYGGISAEPISTPHQYQPYGEIFKIKLDGSDLKRLTQNS 665
S G HP +SPDG+ + F+S G A I+ ++ DGS R+ ++
Sbjct: 375 SEGSNEHPRWSPDGRFLTFSSTRDGGEA--------------IYVMRSDGSGQTRVYRSK 420
Query: 666 FEDGTPAWGPRF 677
+ P W PR+
Sbjct: 421 GKASHPTWSPRW 432
Score = 45 (20.9 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 209 RRLTPYGVADFSPAVSPSGKYTAVASY--GN 237
+RLT + +P SP+G+ A SY GN
Sbjct: 196 QRLTKNRSINLNPDFSPNGRELAYTSYRRGN 226
>ASPGD|ASPL0000037579 [details] [associations]
symbol:AN2818 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR015943 Gene3D:2.130.10.10
Gene3D:2.120.10.30 InterPro:IPR011042 EMBL:BN001306
EMBL:AACD01000050 InterPro:IPR011659 Pfam:PF07676 eggNOG:COG0823
RefSeq:XP_660422.1 ProteinModelPortal:Q5B9G2
EnsemblFungi:CADANIAT00010283 GeneID:2874405 KEGG:ani:AN2818.2
HOGENOM:HOG000234674 OMA:NDAHAVW OrthoDB:EOG4XPTQ7 Uniprot:Q5B9G2
Length = 679
Score = 158 (60.7 bits), Expect = 4.0e-11, Sum P(2) = 4.0e-11
Identities = 58/177 (32%), Positives = 83/177 (46%)
Query: 508 TNGKNNAFPSVSPDGKWIVFR-----STR--TGYKNLYIMDAEGGEGYGLHRLTEGPWSD 560
T+ N+ FPS S DG IVFR ST TG L +MD + LT W D
Sbjct: 510 TSIMNSGFPSYSHDGSKIVFRVWGANSTNGDTGQLGLRVMDLNTRN---ITALTN-EW-D 564
Query: 561 TMCNWSPDG--EWIAFASDRDNPGSGSFEMYLIHPNGTGLRKLIQSGSAGRANHPYFSPD 618
+ +SP G E I F G ++++ I P+GT L L SG G H +S D
Sbjct: 565 NLPFFSPAGFEERIVFTR---KTGVYNYDVCTIKPDGTDLEVLTSSG--GNDAHAVWSYD 619
Query: 619 GKSIVFTSDYGGISAEPISTPHQYQPYGEIFKIKLDGSDLKRLTQNSFEDGTPAWGP 675
G+ I++++ G E +QPYG++ + DG + + LT + +ED P P
Sbjct: 620 GR-IMYSTGMFGFQYECALYDDTFQPYGQVMIMDADGGNKQVLTDSIWEDSMPLLVP 675
Score = 148 (57.2 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 43/132 (32%), Positives = 66/132 (50%)
Query: 518 VSPDGKWIVFRSTRTGYK-NLYIMDAEGGEGYGLHR--LTEGPWSDTMCN------WSPD 568
+SPDG + ST GY+ N++I+D E G+ + + L+ ++T+ N WSPD
Sbjct: 149 LSPDGTLAAYVSTENGYRANIWILDIETGKRWNVTDTPLSRRSVNETLMNGYFRPSWSPD 208
Query: 569 GEWIAFASDRDNP--GSGS--------------FEMYLIHPNGTGLRKLIQSGSAGRANH 612
G WIAF+SDR+ G G +Y + +G+G R+L +
Sbjct: 209 GRWIAFSSDRNTEWRGHGDDTYLGISGWEHTQELSIYAVRADGSGFRQLATKPGYSLGS- 267
Query: 613 PYFSPDGKSIVF 624
P +SPDGK IV+
Sbjct: 268 PSWSPDGKRIVY 279
Score = 80 (33.2 bits), Expect = 4.0e-11, Sum P(2) = 4.0e-11
Identities = 34/117 (29%), Positives = 42/117 (35%)
Query: 425 SFSPKGDRIAFV-EFPG-----VYVVNSDGSNRRQVYFKNAF--STVWDPVREAVVYTSG 476
SFSP GD I F E G +Y V DGS+ + + + S V P Y S
Sbjct: 102 SFSPSGDWITFTGERSGDGNSDIYRVRPDGSDLQLLLSTPSMEDSVVLSPDGTLAAYVST 161
Query: 477 GPEFAXXXXXXXXXXXXXXXXXXXXAVRRLTTNGKNNAF--PSVSPDGKWIVFRSTR 531
+ RR N + PS SPDG+WI F S R
Sbjct: 162 ENGYRANIWILDIETGKRWNVTDTPLSRRSVNETLMNGYFRPSWSPDGRWIAFSSDR 218
Score = 72 (30.4 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 34/109 (31%), Positives = 50/109 (45%)
Query: 167 SMKDKPILS--GEYLIYVSTHENPGTPRTSWAAVYSTELK-----TGLTRRLTPYGVAD- 218
SM+D +LS G YVST EN G W T + T L+RR + +
Sbjct: 142 SMEDSVVLSPDGTLAAYVST-EN-GYRANIWILDIETGKRWNVTDTPLSRRSVNETLMNG 199
Query: 219 -FSPAVSPSGKYTAVASYGNKGWDGEVEMLSTDIYIFLTR-DGTQRVKI 265
F P+ SP G++ A +S N W G + D Y+ ++ + TQ + I
Sbjct: 200 YFRPSWSPDGRWIAFSSDRNTEWRGHGD----DTYLGISGWEHTQELSI 244
Score = 57 (25.1 bits), Expect = 9.4e-09, Sum P(2) = 9.4e-09
Identities = 49/220 (22%), Positives = 89/220 (40%)
Query: 136 SRTALEQHGAEVSTRVQVPLLDLNEVNGGVISMKDKPILSGEYLIYVSTHENPGTPRTSW 195
S+ LE GA S R P L IS + G ++ PGT
Sbjct: 25 SQLGLEARGAAESPRGHPPA-HLQAPQSPSISSRTNSTKKG---VFYMNRIAPGT----- 75
Query: 196 AAVYSTELKTGLTRRLTPYGVADFSPAVSPSGKYTAVASYGNKGWDGEVEMLSTDIYIFL 255
+ +Y + R L P + ++ + SPSG + + G + DG ++DIY +
Sbjct: 76 SELYISTANGSSERPLLPNPIYEYHASFSPSGDW--ITFTGERSGDG-----NSDIYR-V 127
Query: 256 TRDGTQRVKIVENGGWPCWV---DESTLFFHRKSEEDDWISVYKVILPQTGL---VSTES 309
DG+ ++ V + TL + +E +++ ++ +TG V+
Sbjct: 128 RPDGSDLQLLLSTPSMEDSVVLSPDGTLAAYVSTENGYRANIW-ILDIETGKRWNVTDTP 186
Query: 310 VSIQRVTPPGLHA-FTPATSPGNNKFIAVATRRPTSSYRH 348
+S + V ++ F P+ SP + ++IA ++ R T H
Sbjct: 187 LSRRSVNETLMNGYFRPSWSP-DGRWIAFSSDRNTEWRGH 225
Score = 39 (18.8 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 10/17 (58%), Positives = 12/17 (70%)
Query: 420 DGSF-PSFSPKGDRIAF 435
+G F PS+SP G IAF
Sbjct: 198 NGYFRPSWSPDGRWIAF 214
>UNIPROTKB|P0A855 [details] [associations]
symbol:tolB species:83333 "Escherichia coli K-12"
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0043213 "bacteriocin transport" evidence=IEA;IMP] [GO:0017038
"protein import" evidence=IEA;IMP] [GO:0015031 "protein transport"
evidence=IMP] [GO:0042597 "periplasmic space" evidence=IDA]
[GO:0016020 "membrane" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] HAMAP:MF_00671 InterPro:IPR002469 InterPro:IPR007195
InterPro:IPR014167 InterPro:IPR015943 Pfam:PF00930 Pfam:PF04052
GO:GO:0016020 Gene3D:2.130.10.10 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0006508
GO:GO:0030288 GO:GO:0043213 GO:GO:0017038 EMBL:X65796 EMBL:M28232
PDB:2HQS PDB:2W8B PDBsum:2HQS PDBsum:2W8B TCDB:2.C.1.2.1
InterPro:IPR011659 Pfam:PF07676 eggNOG:COG0823 KO:K03641
HOGENOM:HOG000004098 OMA:VREPSWG Gene3D:3.40.50.10070
SUPFAM:SSF52964 TIGRFAMs:TIGR02800 PIR:C64810 RefSeq:NP_415268.1
RefSeq:YP_489020.1 PDB:1C5K PDB:1CRZ PDB:2IVZ PDB:3IAX PDBsum:1C5K
PDBsum:1CRZ PDBsum:2IVZ PDBsum:3IAX ProteinModelPortal:P0A855
SMR:P0A855 DIP:DIP-48262N SWISS-2DPAGE:P0A855 PaxDb:P0A855
PRIDE:P0A855 EnsemblBacteria:EBESCT00000001423
EnsemblBacteria:EBESCT00000017030 GeneID:12932834 GeneID:945429
KEGG:ecj:Y75_p0720 KEGG:eco:b0740 PATRIC:32116679 EchoBASE:EB1001
EcoGene:EG11008 ProtClustDB:PRK03629 BioCyc:EcoCyc:EG11008-MONOMER
BioCyc:ECOL316407:JW5100-MONOMER EvolutionaryTrace:P0A855
Genevestigator:P0A855 Uniprot:P0A855
Length = 430
Score = 176 (67.0 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 42/129 (32%), Positives = 72/129 (55%)
Query: 502 AVRRLTTNGKNNAFPSVSPDGKWIVFRSTRTGYKNLYIMDAEGGEGYGLHRLTEGPWSDT 561
AVR++ + ++N P+ SPDG + F ++TG NLY+MD G+ + ++T+G ++T
Sbjct: 235 AVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQ---IRQVTDGRSNNT 291
Query: 562 MCNWSPDGEWIAFASDRDNPGSGSFEMYLIHPNGTGLRKLIQSGSAGRANHPYFSPDGKS 621
W PD + +AF SD+ +G ++Y ++ NG +++ GS + S DGK
Sbjct: 292 EPTWFPDSQNLAFTSDQ----AGRPQVYKVNINGGAPQRITWEGSQNQDAD--VSSDGKF 345
Query: 622 IVFTSDYGG 630
+V S GG
Sbjct: 346 MVMVSSNGG 354
Score = 128 (50.1 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 64/256 (25%), Positives = 117/256 (45%)
Query: 373 LNPFISPDSSRVGYHKCRGGSTREDGNNQLLLENIKS-PLPDISLF-RFDGSFPSFSPKG 430
++P SPD S++ Y T E G + L+++ + + + ++ F R +G+ P+FSP G
Sbjct: 203 MSPAWSPDGSKLAY------VTFESGRSALVIQTLANGAVRQVASFPRHNGA-PAFSPDG 255
Query: 431 DRIAF-VEFPG---VYVVNSDGSNRRQVYFKNAFST--VWDPVREAVVYTS---GGPEFA 481
++AF + G +YV++ RQV + +T W P + + +TS G P+
Sbjct: 256 SKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQV- 314
Query: 482 XXXXXXXXXXXXXXXXXXXXAVRRLTTNGKNNAFPSVSPDGKWIVFRSTRTGYKNLYIMD 541
A +R+T G N VS DGK++V S+ G +++ D
Sbjct: 315 ------------YKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQD 362
Query: 542 AEGGEGYGLHRLTEGPWSDTMCNWSPDGEWIAFASDRDNPGSGSFEMYLIHPNGTGLRKL 601
G G+ L+ + D + +P+G + ++S + G GS + L+ +G +L
Sbjct: 363 LATG---GVQVLSS-TFLDETPSLAPNGTMVIYSSSQ---GMGSV-LNLVSTDGRFKARL 414
Query: 602 IQSGSAGRANHPYFSP 617
+ G+ P +SP
Sbjct: 415 --PATDGQVKFPAWSP 428
>TIGR_CMR|SPO_3109 [details] [associations]
symbol:SPO_3109 "tolB protein, putative" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0006810 "transport" evidence=ISS]
[GO:0019534 "toxin transporter activity" evidence=ISS]
HAMAP:MF_00671 InterPro:IPR007195 InterPro:IPR014167
InterPro:IPR015943 Pfam:PF04052 Gene3D:2.130.10.10 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0042597 GO:GO:0017038
InterPro:IPR011659 Pfam:PF07676 eggNOG:COG0823 KO:K03641
OMA:VREPSWG Gene3D:3.40.50.10070 SUPFAM:SSF52964 TIGRFAMs:TIGR02800
RefSeq:YP_168312.1 ProteinModelPortal:Q5LNU4 DNASU:3193729
GeneID:3193729 KEGG:sil:SPO3109 PATRIC:23379663
HOGENOM:HOG000004097 ProtClustDB:PRK05137 Uniprot:Q5LNU4
Length = 439
Score = 161 (61.7 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 58/216 (26%), Positives = 95/216 (43%)
Query: 424 PSFSPKGDRIAFVE----FPGVYVVNSDGSNRRQVYFKN---AFSTVWDPVREAVVYTSG 476
P FSP GDR+ + FP +++++ +R + ++ +F+ + P + V+++
Sbjct: 210 PRFSPTGDRVLYTSYQGGFPRIHILDVGQVQQRVLQSQDGTMSFAPRFSPDGQTVLFS-- 267
Query: 477 GPEFAXXXXXXXXXXXXXXXXXXXXAVRRLTTNGKNNAFPSVSPDGKWIVFRSTRTGYKN 536
A RLT+ PS +PDG IVF S R+G
Sbjct: 268 ---LAQGGNTDLYAMNIASGQST-----RLTSAPSIETAPSYAPDGSRIVFESDRSGTPQ 319
Query: 537 LYIMDAEGGEGYGLHRLTEGPWSDTMCNWSPDGEWIAFASDRDNPGSGSFEMYLIHPNGT 596
LY+M A GGE + +G + + WSP G+ IAF G F + ++ +G+
Sbjct: 320 LYVMSAAGGEATRIS-FGQGRYGTPV--WSPRGDLIAFTKQ----SKGRFHIGVMRADGS 372
Query: 597 GLRKLIQSGSAGRANHPYFSPDGKSIVFTSDYGGIS 632
R L S P +SP+G+ I+FT + G S
Sbjct: 373 EERLLTASFLD---EGPTWSPNGRVIMFTRETQGAS 405
>TIGR_CMR|CBU_0090 [details] [associations]
symbol:CBU_0090 "tolB protein" species:227377 "Coxiella
burnetii RSA 493" [GO:0005215 "transporter activity" evidence=ISS]
[GO:0006810 "transport" evidence=ISS] [GO:0019534 "toxin
transporter activity" evidence=ISS] HAMAP:MF_00671
InterPro:IPR007195 InterPro:IPR014167 InterPro:IPR015943
Pfam:PF04052 Gene3D:2.130.10.10 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0042597 GO:GO:0017038
InterPro:IPR011659 Pfam:PF07676 eggNOG:COG0823 KO:K03641
HOGENOM:HOG000004098 OMA:VREPSWG Gene3D:3.40.50.10070
SUPFAM:SSF52964 TIGRFAMs:TIGR02800 RefSeq:NP_819142.2
ProteinModelPortal:Q83F59 GeneID:1207960 KEGG:cbu:CBU_0090
PATRIC:17928857 ProtClustDB:CLSK913826
BioCyc:CBUR227377:GJ7S-90-MONOMER Uniprot:Q83F59
Length = 437
Score = 159 (61.0 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 47/139 (33%), Positives = 71/139 (51%)
Query: 504 RRLTTNGKNNAFPSVSPDGKWIVFRSTRTGYKNLYIMDAEGGEGYGLHRLTEGPWS-DTM 562
+RL+ N P+ SPDGK + T+TG +YI++ G L +T+G WS DT
Sbjct: 242 QRLSEAPGINGAPAFSPDGKQLALVLTKTGNPKIYILNLADGH---LREITKG-WSIDTE 297
Query: 563 CNWSPDGEWIAFASDRDNPGSGSFEMYLIHPNGTGLRKLIQSGSAGRANHPYFSPDGKSI 622
WSPDG+ + F S+RD G+ ++Y + ++ G P F PDGKSI
Sbjct: 298 PAWSPDGKSLLFTSNRD----GTPQIYNYSFADGSINRVTYRGDYNA--RPSFMPDGKSI 351
Query: 623 VFTS-DYG--GISAEPIST 638
+ + G GI+ + +ST
Sbjct: 352 IMMHRENGLFGIARQDLST 370
>UNIPROTKB|Q9KR11 [details] [associations]
symbol:tolB "Protein TolB" species:243277 "Vibrio cholerae
O1 biovar El Tor str. N16961" [GO:0005215 "transporter activity"
evidence=ISS] [GO:0006810 "transport" evidence=ISS] HAMAP:MF_00671
InterPro:IPR007195 InterPro:IPR014167 InterPro:IPR015943
Pfam:PF04052 Gene3D:2.130.10.10 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005215 GO:GO:0042597 GO:GO:0017038
InterPro:IPR011659 Pfam:PF07676 eggNOG:COG0823 KO:K03641
OMA:VREPSWG ProtClustDB:PRK04792 Gene3D:3.40.50.10070
SUPFAM:SSF52964 TIGRFAMs:TIGR02800 PIR:H82151 RefSeq:NP_231470.1
ProteinModelPortal:Q9KR11 DNASU:2613590 GeneID:2613590
KEGG:vch:VC1836 PATRIC:20082714 Uniprot:Q9KR11
Length = 450
Score = 158 (60.7 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 49/161 (30%), Positives = 83/161 (51%)
Query: 505 RLTTNGKNNAF-PSVSPDGKWIVFRSTRTGYKNLYIMDAEGGEGYGLHRLTEGPWSDTMC 563
RL K P+ SPDG+ + + S + G +Y+M+ G+ +LT P +
Sbjct: 213 RLVLRSKQPLMSPAWSPDGQTLAYVSFQNGQAEIYMMNIYSGKR---EKLTSFPRHNGAP 269
Query: 564 NWSPDGEWIAFASDRDNPGSGSFEMYLIHPNGTGLRKLIQSGSAGRANH--PYFSPDGKS 621
+SPDG+ +A + +G+ ++Y + R+L + S GR+N+ P++ PDGKS
Sbjct: 270 RFSPDGKTLALVLSK----TGNLQVYTMD---LATRRLTEVTS-GRSNNTEPFWHPDGKS 321
Query: 622 IVFTSDYGGISAEPISTPHQYQPYGEIFKIKLDGSDLKRLT 662
++FTSD GG +P +I+++ L G + KRLT
Sbjct: 322 LIFTSDRGG------------KP--QIYQVNLSGGETKRLT 348
Score = 126 (49.4 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 58/238 (24%), Positives = 99/238 (41%)
Query: 397 DGNNQLLLENIKSPLPDISLFRFDGSFPSFSPKGDRIAFVEFPGVYVVNSDGSNRRQVYF 456
DG N+ L+ K PL P++SP G +A+V F + + ++Y
Sbjct: 208 DGYNERLVLRSKQPLMS----------PAWSPDGQTLAYVSFQ---------NGQAEIYM 248
Query: 457 KNAFSTVWDPVREAVVYTSGGPEFA---XXXXXXXXXXXXXXXXXXXXAVRRLT--TNGK 511
N +S + + + +G P F+ A RRLT T+G+
Sbjct: 249 MNIYSGKREKLTSFPRH-NGAPRFSPDGKTLALVLSKTGNLQVYTMDLATRRLTEVTSGR 307
Query: 512 -NNAFPSVSPDGKWIVFRSTRTGYKNLYIMDAEGGEGYGLHRLTEGPWSDTMCNWSPDGE 570
NN P PDGK ++F S R G +Y ++ GGE RLT + +PDG+
Sbjct: 308 SNNTEPFWHPDGKSLIFTSDRGGKPQIYQVNLSGGE---TKRLTWQGSQNLGGQITPDGK 364
Query: 571 WIAFASDRDNPGSGSFEMYLIHPNGTGLRKLIQSGSAGRANHPYFSPDGKSIVFTSDY 628
++ + R + G + L TG +++ + P +P+G ++++S Y
Sbjct: 365 FLVMVN-RSDSGFNLAKQDL----ETGAMQILTKTLLDES--PSIAPNGGMVIYSSIY 415
Score = 40 (19.1 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 9/34 (26%), Positives = 13/34 (38%)
Query: 642 YQPYGEIFKIKLDGSDLKRLTQNSFEDGTPAWGP 675
Y + + +DG RL + PAW P
Sbjct: 415 YNKANVLSMVSIDGRFKARLPATNGRVRAPAWSP 448
>TIGR_CMR|VC_1836 [details] [associations]
symbol:VC_1836 "tolB protein" species:686 "Vibrio cholerae
O1 biovar El Tor" [GO:0005215 "transporter activity" evidence=ISS]
[GO:0006810 "transport" evidence=ISS] HAMAP:MF_00671
InterPro:IPR007195 InterPro:IPR014167 InterPro:IPR015943
Pfam:PF04052 Gene3D:2.130.10.10 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005215 GO:GO:0042597 GO:GO:0017038
InterPro:IPR011659 Pfam:PF07676 eggNOG:COG0823 KO:K03641
OMA:VREPSWG ProtClustDB:PRK04792 Gene3D:3.40.50.10070
SUPFAM:SSF52964 TIGRFAMs:TIGR02800 PIR:H82151 RefSeq:NP_231470.1
ProteinModelPortal:Q9KR11 DNASU:2613590 GeneID:2613590
KEGG:vch:VC1836 PATRIC:20082714 Uniprot:Q9KR11
Length = 450
Score = 158 (60.7 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 49/161 (30%), Positives = 83/161 (51%)
Query: 505 RLTTNGKNNAF-PSVSPDGKWIVFRSTRTGYKNLYIMDAEGGEGYGLHRLTEGPWSDTMC 563
RL K P+ SPDG+ + + S + G +Y+M+ G+ +LT P +
Sbjct: 213 RLVLRSKQPLMSPAWSPDGQTLAYVSFQNGQAEIYMMNIYSGKR---EKLTSFPRHNGAP 269
Query: 564 NWSPDGEWIAFASDRDNPGSGSFEMYLIHPNGTGLRKLIQSGSAGRANH--PYFSPDGKS 621
+SPDG+ +A + +G+ ++Y + R+L + S GR+N+ P++ PDGKS
Sbjct: 270 RFSPDGKTLALVLSK----TGNLQVYTMD---LATRRLTEVTS-GRSNNTEPFWHPDGKS 321
Query: 622 IVFTSDYGGISAEPISTPHQYQPYGEIFKIKLDGSDLKRLT 662
++FTSD GG +P +I+++ L G + KRLT
Sbjct: 322 LIFTSDRGG------------KP--QIYQVNLSGGETKRLT 348
Score = 126 (49.4 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 58/238 (24%), Positives = 99/238 (41%)
Query: 397 DGNNQLLLENIKSPLPDISLFRFDGSFPSFSPKGDRIAFVEFPGVYVVNSDGSNRRQVYF 456
DG N+ L+ K PL P++SP G +A+V F + + ++Y
Sbjct: 208 DGYNERLVLRSKQPLMS----------PAWSPDGQTLAYVSFQ---------NGQAEIYM 248
Query: 457 KNAFSTVWDPVREAVVYTSGGPEFA---XXXXXXXXXXXXXXXXXXXXAVRRLT--TNGK 511
N +S + + + +G P F+ A RRLT T+G+
Sbjct: 249 MNIYSGKREKLTSFPRH-NGAPRFSPDGKTLALVLSKTGNLQVYTMDLATRRLTEVTSGR 307
Query: 512 -NNAFPSVSPDGKWIVFRSTRTGYKNLYIMDAEGGEGYGLHRLTEGPWSDTMCNWSPDGE 570
NN P PDGK ++F S R G +Y ++ GGE RLT + +PDG+
Sbjct: 308 SNNTEPFWHPDGKSLIFTSDRGGKPQIYQVNLSGGE---TKRLTWQGSQNLGGQITPDGK 364
Query: 571 WIAFASDRDNPGSGSFEMYLIHPNGTGLRKLIQSGSAGRANHPYFSPDGKSIVFTSDY 628
++ + R + G + L TG +++ + P +P+G ++++S Y
Sbjct: 365 FLVMVN-RSDSGFNLAKQDL----ETGAMQILTKTLLDES--PSIAPNGGMVIYSSIY 415
Score = 40 (19.1 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 9/34 (26%), Positives = 13/34 (38%)
Query: 642 YQPYGEIFKIKLDGSDLKRLTQNSFEDGTPAWGP 675
Y + + +DG RL + PAW P
Sbjct: 415 YNKANVLSMVSIDGRFKARLPATNGRVRAPAWSP 448
>TIGR_CMR|APH_1037 [details] [associations]
symbol:APH_1037 "Tol-Pal system beta propeller repeat
protein TolB" species:212042 "Anaplasma phagocytophilum HZ"
[GO:0005215 "transporter activity" evidence=ISS] [GO:0006810
"transport" evidence=ISS] [GO:0009405 "pathogenesis" evidence=ISS]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=ISS] InterPro:IPR007195 InterPro:IPR015943 Pfam:PF04052
Gene3D:2.130.10.10 GO:GO:0015031 EMBL:CP000235
GenomeReviews:CP000235_GR GO:GO:0042597 InterPro:IPR011659
Pfam:PF07676 eggNOG:COG0823 KO:K03641 Gene3D:3.40.50.10070
SUPFAM:SSF52964 HOGENOM:HOG000004097 ProtClustDB:PRK05137
RefSeq:YP_505595.1 ProteinModelPortal:Q2GJ56 STRING:Q2GJ56
GeneID:3930483 KEGG:aph:APH_1037 PATRIC:20950826 OMA:IYEMSAS
BioCyc:APHA212042:GHPM-1043-MONOMER Uniprot:Q2GJ56
Length = 435
Score = 155 (59.6 bits), Expect = 8.9e-08, P = 8.9e-08
Identities = 58/208 (27%), Positives = 90/208 (43%)
Query: 422 SFPSFSPKGDRIAFVEFPGVYVVNSDGSNRRQVY-FKNAFSTV---WDPVREAVVYTSGG 477
SFP FSP I + S S R +Y + S++ + +V ++ G
Sbjct: 201 SFPRFSPDTKSIVYT-----LTSQSSPSGRVMLYDMRREVSSLLIGMSGIVSSVRFSPSG 255
Query: 478 PEFAXXXXXXXXXXXXXXXXXXXXAVRRLTTNGKNNAFPSVSPDGKWIVFRSTRTGYKNL 537
E + RLT + N S SPD K IVF S R G +L
Sbjct: 256 REILLSESLNGSTDIYSFSLISKK-LTRLTADEFMNTSASYSPDEKSIVFASDRDGGSHL 314
Query: 538 YIMDAEGGEGYGLHRLTEGPWSDTMCNWSPDGEWIAFASDRDNPGSGSFEMYLIHPNGTG 597
YIMDA G +++ G WSP+G WIAF + G+ + + ++ PNG+
Sbjct: 315 YIMDANGSNP---RKISSGSGRYMSPVWSPNGTWIAFTKVK---GARCY-IGIMRPNGSK 367
Query: 598 LRKLIQSGSAGRANHPYFSPDGKSIVFT 625
R +I S A P ++P+G+++++T
Sbjct: 368 ER-MIASDCF--AEGPSWAPNGQAVLYT 392
>UNIPROTKB|Q0C5V5 [details] [associations]
symbol:tolB "Protein TolB" species:228405 "Hyphomonas
neptunium ATCC 15444" [GO:0005215 "transporter activity"
evidence=ISS] [GO:0006810 "transport" evidence=ISS] HAMAP:MF_00671
InterPro:IPR007195 InterPro:IPR014167 InterPro:IPR015943
Pfam:PF04052 Gene3D:2.130.10.10 GO:GO:0005215 GO:GO:0042597
EMBL:CP000158 GenomeReviews:CP000158_GR GO:GO:0017038
InterPro:IPR011659 Pfam:PF07676 eggNOG:COG0823 KO:K03641
OMA:VREPSWG Gene3D:3.40.50.10070 SUPFAM:SSF52964 TIGRFAMs:TIGR02800
HOGENOM:HOG000004097 RefSeq:YP_758888.1 ProteinModelPortal:Q0C5V5
STRING:Q0C5V5 GeneID:4290508 KEGG:hne:HNE_0154 PATRIC:32213096
BioCyc:HNEP228405:GI69-201-MONOMER Uniprot:Q0C5V5
Length = 451
Score = 152 (58.6 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 59/181 (32%), Positives = 83/181 (45%)
Query: 504 RRLTTNGKNNAFPSVSPDGKWIVFRSTRTGYKNLYIMDAEG-------GEGYGLHRLTEG 556
RRLT + + PS+SPDGK +VF S R G LYIM+ +G G R+T G
Sbjct: 290 RRLTDHPAIDTSPSMSPDGKSVVFNSDRGGTPQLYIMNTDGSPRACASGGRDTACRITFG 349
Query: 557 PWSDTMCNWSPDGEWIAFASDRDNPGSGSFEMYLIHPNGTGLRKLIQSGSAGRANHPYFS 616
+ WSP G+ IAF G F + +I +G G R L +S P +S
Sbjct: 350 RGRYSTPVWSPRGDLIAFTKQE----GGKFYIGVIGTDGKGERLLSESYLD---EGPDWS 402
Query: 617 PDGKSIVF-TSDYGGISAEPISTPHQYQPYGEIFKIKLDGSDLKR-LTQNSFEDGTPAWG 674
P+G+ IVF + G A+ ++ + L G + +R +TQ D PAW
Sbjct: 403 PNGRVIVFFRENRPGAGAQ-------------LWSVDLSGRNERRVMTQTDASD--PAWS 447
Query: 675 P 675
P
Sbjct: 448 P 448
>TIGR_CMR|SO_1311 [details] [associations]
symbol:SO_1311 "transcriptional regulator" species:211586
"Shewanella oneidensis MR-1" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR001867 InterPro:IPR002469 InterPro:IPR015943
InterPro:IPR016032 Pfam:PF00486 Pfam:PF00930 SMART:SM00862
GO:GO:0016021 GO:GO:0006355 Gene3D:2.130.10.10 GO:GO:0035556
GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
GO:GO:0005622 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0000156
SUPFAM:SSF46894 InterPro:IPR011659 Pfam:PF07676 RefSeq:NP_716931.2
ProteinModelPortal:Q8EHB7 GeneID:1169133 KEGG:son:SO_1311
PATRIC:23522280 Uniprot:Q8EHB7
Length = 715
Score = 123 (48.4 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 35/94 (37%), Positives = 48/94 (51%)
Query: 506 LTTNGKNNAFPSVSPDGKWIVFRSTRTGYKNLYIMDAEGGEGYGLHRLTEGPWSDTMCNW 565
L +G ++ P SP+ K IVF S+ TGY ++ D G + L +LT+ W
Sbjct: 457 LLYSGVSHRNPDYSPEAKRIVFVSSETGYNEIWTSDINGQK---LEQLTQLKSRVAYPRW 513
Query: 566 SPDGEWIAF-ASDRDNPGSGSFEMYLIHPNGTGL 598
SPDG IAF A D N G+ F + L + N T L
Sbjct: 514 SPDGSRIAFIAPDDRNEGNRIFILDLTNKNITAL 547
Score = 78 (32.5 bits), Expect = 0.00057, Sum P(3) = 0.00057
Identities = 20/71 (28%), Positives = 36/71 (50%)
Query: 519 SPDGKWI-VFRSTRTGYKNLYIMDAEGGEGYGLHRLTEGPWSDTMCNWSPDGEWIAFASD 577
SPDG+W+ + R ++++I D RLT+G +W+PD + + FA++
Sbjct: 337 SPDGRWLAIARRFSNISEDIFIRDLASAHE---KRLTQGLEDIRGLSWTPDSQALVFATE 393
Query: 578 RDNPGSGSFEM 588
D+ S F +
Sbjct: 394 -DSGSSNGFTL 403
Score = 74 (31.1 bits), Expect = 0.00057, Sum P(3) = 0.00057
Identities = 29/90 (32%), Positives = 39/90 (43%)
Query: 601 LIQSGSAGRANHPYFSPDGKSIVFTSDYGGISAEPISTPHQYQPYGEIFKIKLDGSDLKR 660
L+ SG + R +P +SP+ K IVF S G Y EI+ ++G L++
Sbjct: 457 LLYSGVSHR--NPDYSPEAKRIVFVSSETG--------------YNEIWTSDINGQKLEQ 500
Query: 661 LTQNSFEDGTPAWGP-----RFIRPVDVEE 685
LTQ P W P FI P D E
Sbjct: 501 LTQLKSRVAYPRWSPDGSRIAFIAPDDRNE 530
Score = 63 (27.2 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 18/58 (31%), Positives = 26/58 (44%)
Query: 176 GEYLIYVSTHENPGTPRTSWAAVYSTELKTGLTRRLTPYGVADFSPAVSPSGKYTAVA 233
G+YL Y+S HE+ ++ STE T D A SP G++ A+A
Sbjct: 289 GQYLAYISAHESEKMGGIYRLSLKSTEATAERLSCDTRCNYEDRDLAYSPDGRWLAIA 346
>TIGR_CMR|CPS_2573 [details] [associations]
symbol:CPS_2573 "amidohydrolase family protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0008152
"metabolic process" evidence=ISS] [GO:0016810 "hydrolase activity,
acting on carbon-nitrogen (but not peptide) bonds" evidence=ISS]
InterPro:IPR005920 InterPro:IPR006680 InterPro:IPR011059
Pfam:PF01979 GO:GO:0005737 EMBL:CP000083 GenomeReviews:CP000083_GR
eggNOG:COG1506 SUPFAM:SSF51338 GO:GO:0016812 GO:GO:0019556
PANTHER:PTHR22642 InterPro:IPR011659 Pfam:PF07676
RefSeq:YP_269288.1 ProteinModelPortal:Q481I1 STRING:Q481I1
GeneID:3519611 KEGG:cps:CPS_2573 PATRIC:21468207
HOGENOM:HOG000285198 OMA:VEPTFSP ProtClustDB:CLSK889721
BioCyc:CPSY167879:GI48-2636-MONOMER Uniprot:Q481I1
Length = 1071
Score = 144 (55.7 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 49/145 (33%), Positives = 65/145 (44%)
Query: 516 PSVSPDGKWIVFRSTRTGYKNLYIMDAEGGEGYGL----HRLTEGPWSDTMCNWSPDGEW 571
P SPDGK+I F S G NL+IM A+G E + RL P WSPDG +
Sbjct: 90 PRFSPDGKYIAFTSDEDGGDNLWIMKADGSEAKAVTTETFRLLNSP------AWSPDGNY 143
Query: 572 IAFASDRDNPGS-GSFEMYLIHPNG-TGLRKLIQSGSAGRANHPYFSPDGKSIVFTSDYG 629
I S G+ E+++ H +G G+ + P FS DGK + F+ D
Sbjct: 144 IVGRKHYTGTRSLGAGEVWMYHKSGGNGVMLTKRPNEQKDLGEPAFSHDGKYVYFSQD-- 201
Query: 630 GISAEPISTPHQYQPYGE--IFKIK 652
A P + H Y E I+KIK
Sbjct: 202 ---ATPGKSFH-YSKDSEKGIYKIK 222
Score = 133 (51.9 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 39/113 (34%), Positives = 59/113 (52%)
Query: 518 VSPDGKWIVFRSTRTGYKNLYIMDAEGGEGYGLHRLTEGPWSDTMCNWSPDGEWIAFASD 577
++PDGK I+F G ++Y M A GGE L +T+ W +SPDG++IAF SD
Sbjct: 52 LNPDGKTIIF--DLLG--DIYTMPASGGEATPL--MTDIAWQ-MQPRFSPDGKYIAFTSD 104
Query: 578 RDNPGSGSFEMYLIHPNGTGLRKLIQSGSAGRANHPYFSPDGKSIVFTSDYGG 630
D G ++++ +G+ K + + + N P +SPDG IV Y G
Sbjct: 105 ED----GGDNLWIMKADGSEA-KAVTTETFRLLNSPAWSPDGNYIVGRKHYTG 152
Score = 39 (18.8 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 12/27 (44%), Positives = 14/27 (51%)
Query: 31 SIIFTTLGRSDYAFDIYTLPISDRPTT 57
+IIF LG DIYT+P S T
Sbjct: 58 TIIFDLLG------DIYTMPASGGEAT 78
>ASPGD|ASPL0000061094 [details] [associations]
symbol:AN9372 species:162425 "Emericella nidulans"
[GO:0006508 "proteolysis" evidence=IEA] [GO:0008236 "serine-type
peptidase activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001375 Pfam:PF00326 EMBL:BN001308
Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0006508 GO:GO:0008236
eggNOG:COG1506 EMBL:AACD01000172 InterPro:IPR011659 Pfam:PF07676
RefSeq:XP_682641.1 ProteinModelPortal:Q5AQQ8
EnsemblFungi:CADANIAT00001159 GeneID:2867912 KEGG:ani:AN9372.2
OMA:GHVINFM OrthoDB:EOG47H8ZR Uniprot:Q5AQQ8
Length = 625
Score = 128 (50.1 bits), Expect = 0.00014, P = 0.00014
Identities = 41/120 (34%), Positives = 56/120 (46%)
Query: 518 VSPDGKWIVFRSTRTGYKN------LYIMDAEGGEGYGLHRLTEGPWSDTMCNWSPDGEW 571
VSPDG +V+ R KN L+I D G + ++T G + D WSPDG +
Sbjct: 24 VSPDGSKVVYALERFSEKNRRSLSSLWIADV--GIDHSARQITSGLFRDEKPRWSPDGRF 81
Query: 572 IAFASDRDNPGSGSFEMYLIHPNG-TGLRKLIQSGSAGRANHPYFSPDGKSIVFTSDYGG 630
IAF SDR G + +Y++ G L + A R +S DG+ I F S GG
Sbjct: 82 IAFLSDR---GGETGVIYMLGIGGFEEAYPLTEGKDARRVQDFEWSVDGRYIAFLSREGG 138
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.135 0.415 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 721 688 0.00080 121 3 11 22 0.43 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 16
No. of states in DFA: 627 (67 KB)
Total size of DFA: 382 KB (2186 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 58.58u 0.11s 58.69t Elapsed: 00:00:03
Total cpu time: 58.58u 0.11s 58.69t Elapsed: 00:00:03
Start: Mon May 20 16:21:22 2013 End: Mon May 20 16:21:25 2013