BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004972
(721 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224142159|ref|XP_002324426.1| predicted protein [Populus trichocarpa]
gi|222865860|gb|EEF02991.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 1201 bits (3108), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 592/710 (83%), Positives = 652/710 (91%), Gaps = 3/710 (0%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR 60
MA P VTMEVGNDGVA++TLINPPVNALAIPI+AGLK+KF+EAT R+DVKA+VLTG GGR
Sbjct: 1 MAKPHVTMEVGNDGVAVVTLINPPVNALAIPIIAGLKEKFDEATRRNDVKALVLTGKGGR 60
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
FSGGFDINVFQKVH GD+SLMPDVSVELVVN IEDCKKP+VAAVEGLALGGGLELAMGC
Sbjct: 61 FSGGFDINVFQKVHATGDISLMPDVSVELVVNTIEDCKKPVVAAVEGLALGGGLELAMGC 120
Query: 121 HARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 177
HARIAAPKTQLGLPELTLGVIPG TQRLPRL+GLSKAIE+MLLSK I SEEG KLGLI
Sbjct: 121 HARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLLGLSKAIEIMLLSKPIMSEEGKKLGLI 180
Query: 178 DAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 237
DA+V S+ELLKVSR WALDI+ RRKPW+RSLHRTDK+GSLSEAREVLK AR QAKK APN
Sbjct: 181 DAIVPSQELLKVSRQWALDISERRKPWLRSLHRTDKIGSLSEAREVLKAARQQAKKIAPN 240
Query: 238 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 297
+PQHQA LDV+EEGI+HGGY+GVLKEAKVFKELV+ +TS+GLVHVFFAQR TSK+P VTD
Sbjct: 241 VPQHQALLDVMEEGIIHGGYNGVLKEAKVFKELVLTETSKGLVHVFFAQRMTSKIPKVTD 300
Query: 298 IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 357
+GLKPR ++KVAVIGGGLMGSGIATA I++NI+VVLKE+NSEYL KG KTIEANVR LVT
Sbjct: 301 VGLKPRHIKKVAVIGGGLMGSGIATALIVSNIHVVLKEINSEYLQKGTKTIEANVRSLVT 360
Query: 358 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 417
RGKLT+DKA+ AL MLKG LDYS+FKDVDMVIEAVIESVPLKQKIFSE+EK CPPHCILA
Sbjct: 361 RGKLTRDKADKALSMLKGALDYSDFKDVDMVIEAVIESVPLKQKIFSEIEKICPPHCILA 420
Query: 418 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 477
TNTSTIDLN+VGEKTSSQDRIIGAHFFSPAH+MPLLEIVRTE+TSAQ ILDLMTVGK IK
Sbjct: 421 TNTSTIDLNLVGEKTSSQDRIIGAHFFSPAHIMPLLEIVRTEKTSAQAILDLMTVGKTIK 480
Query: 478 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGY 537
KVPVVVGNCTGFAVNRAFFPY+QSA +LV LGVDVFRID I SFGLP+GP+QL DL+GY
Sbjct: 481 KVPVVVGNCTGFAVNRAFFPYTQSALILVHLGVDVFRIDKLISSFGLPMGPYQLQDLSGY 540
Query: 538 GVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPII 597
GVA A KEF AFPDR+FQSPL+ LL+KSGRNGK NGKG Y YEKGSKP+PDPSVLPII
Sbjct: 541 GVALAVEKEFANAFPDRTFQSPLIHLLVKSGRNGKTNGKGYYIYEKGSKPRPDPSVLPII 600
Query: 598 EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSF 657
EE RRL+NIMP GKPI++T+KEIVEM+LFPVVNE+CRVL+EG+VVRASDLD ASVLGMSF
Sbjct: 601 EESRRLANIMPNGKPINITDKEIVEMVLFPVVNEACRVLDEGVVVRASDLDTASVLGMSF 660
Query: 658 PSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPL 707
PSYRGGIVFWAD VG +VY SLKKWSQ +G+F+KPS+FLEERAT GIPL
Sbjct: 661 PSYRGGIVFWADLVGPKHVYDSLKKWSQRFGDFYKPSKFLEERATGGIPL 710
>gi|225445200|ref|XP_002284283.1| PREDICTED: peroxisomal fatty acid beta-oxidation multifunctional
protein AIM1 [Vitis vinifera]
gi|297738804|emb|CBI28049.3| unnamed protein product [Vitis vinifera]
Length = 724
Score = 1181 bits (3054), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 573/724 (79%), Positives = 648/724 (89%), Gaps = 3/724 (0%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR 60
M+ VTMEVGNDGVA+IT+ NPPVNALA+ I+AGLK+K+ EA R+DVKAIV+TG GGR
Sbjct: 1 MSKAEVTMEVGNDGVAVITMSNPPVNALALAIIAGLKEKYAEAMRRNDVKAIVVTGKGGR 60
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
FSGGFDINVFQKVH D+S +PD S++L+VN +ED KKP VAAVEGLALGGGLE+AM C
Sbjct: 61 FSGGFDINVFQKVHKTADISHLPDASIDLLVNTVEDAKKPSVAAVEGLALGGGLEVAMAC 120
Query: 121 HARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 177
HARIAAPKTQLGLPEL+LGV+PG TQRLPRLVGLSKAIEMM LSKSI+SEEG+KLGL+
Sbjct: 121 HARIAAPKTQLGLPELSLGVMPGFGGTQRLPRLVGLSKAIEMMRLSKSISSEEGYKLGLV 180
Query: 178 DAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 237
DA+V+SEELLKVSR WALDI +RKPW+RSLH+T+KLGS+SEA ++LK++R QA+KT P+
Sbjct: 181 DAIVSSEELLKVSRRWALDIVDKRKPWVRSLHQTEKLGSVSEALDILKISRQQARKTVPH 240
Query: 238 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 297
+PQHQACLDVIEEGIVHGGYSG+LKE KVF +LV+ DT++GL+HVFFAQRATSKVPNVTD
Sbjct: 241 LPQHQACLDVIEEGIVHGGYSGLLKETKVFNKLVLSDTAKGLIHVFFAQRATSKVPNVTD 300
Query: 298 IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 357
IGLKPR V+KVAVIGGGLMGSGIATA I +NIYVVLKEVNSEYLLKGIKTIEANVRGLVT
Sbjct: 301 IGLKPRNVKKVAVIGGGLMGSGIATALITSNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 360
Query: 358 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 417
+GKLTQDKA AL MLKGVLDYSEFKD+DMVIEAVIE++ LKQKIFSE+EK C PHCILA
Sbjct: 361 KGKLTQDKARKALSMLKGVLDYSEFKDIDMVIEAVIENISLKQKIFSEIEKICSPHCILA 420
Query: 418 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 477
TNTSTIDLN+VGEKTSSQDRIIGAHFFSPAHVMPLLE+VRTE+TSAQVILDLMTVGK IK
Sbjct: 421 TNTSTIDLNLVGEKTSSQDRIIGAHFFSPAHVMPLLEVVRTEKTSAQVILDLMTVGKAIK 480
Query: 478 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGY 537
K+PVVVG+CTGFAVNR FFPY+Q A LV+LGVD FRID I +FGLP+GPFQL DL+GY
Sbjct: 481 KIPVVVGSCTGFAVNRTFFPYAQGAHFLVNLGVDPFRIDWVISNFGLPMGPFQLQDLSGY 540
Query: 538 GVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPII 597
GVA A KEF AF R+F+SPLV+LLLK+GRNGK NGKG Y YEKGSKP+PDPSVLPII
Sbjct: 541 GVAVAVGKEFATAFQGRTFESPLVNLLLKNGRNGKQNGKGYYIYEKGSKPRPDPSVLPII 600
Query: 598 EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSF 657
EE RRL+NIMPGGKPISV +EI+EMILFPVVNE+CRVL+EG+VVRASDLD SVLGMSF
Sbjct: 601 EESRRLANIMPGGKPISVANQEILEMILFPVVNEACRVLDEGVVVRASDLDITSVLGMSF 660
Query: 658 PSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSAPVSSSSTS 717
PSYRGGIVFWAD VG Y+YT LKKWS +YG FFKPS +LE+RATKGIPLSAP S+S S
Sbjct: 661 PSYRGGIVFWADEVGPYYIYTCLKKWSAMYGTFFKPSSYLEQRATKGIPLSAPASASPAS 720
Query: 718 RARL 721
+RL
Sbjct: 721 NSRL 724
>gi|255546439|ref|XP_002514279.1| 3-hydroxyacyl-CoA dehyrogenase, putative [Ricinus communis]
gi|223546735|gb|EEF48233.1| 3-hydroxyacyl-CoA dehyrogenase, putative [Ricinus communis]
Length = 724
Score = 1178 bits (3047), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 579/724 (79%), Positives = 648/724 (89%), Gaps = 3/724 (0%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR 60
MA P VTMEVGNDGVA+I++ NPPVNALA+PI+ GLK+KF EA R DV+AIVLTG GR
Sbjct: 1 MAKPHVTMEVGNDGVAVISMSNPPVNALAVPIIMGLKEKFTEAARRKDVQAIVLTGKNGR 60
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
FSGGFDI+V QKVH GD S++PDVSV+LVVN IEDCKKP+VAAVEGLALGGGLELAMGC
Sbjct: 61 FSGGFDISVMQKVHQTGDASILPDVSVDLVVNAIEDCKKPVVAAVEGLALGGGLELAMGC 120
Query: 121 HARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 177
HARI APKTQLGLPEL+LG+IPG TQRLPRLVGL KAI+MML SK I SEEG KLGL+
Sbjct: 121 HARIVAPKTQLGLPELSLGIIPGFGGTQRLPRLVGLPKAIQMMLTSKPIMSEEGKKLGLV 180
Query: 178 DAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 237
D +V+S+ELLKVSR WALDI RRKPW+RSLH TDKLGSLSEA E+LK AR QAKKTAPN
Sbjct: 181 DVIVSSQELLKVSRQWALDIKERRKPWMRSLHMTDKLGSLSEALELLKAARQQAKKTAPN 240
Query: 238 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 297
MPQHQACLDVIE+G+VHGGYSGVLKEAKVFKELV+ DT++ L+HVFFAQR TSKVPNV+D
Sbjct: 241 MPQHQACLDVIEDGVVHGGYSGVLKEAKVFKELVISDTAKSLIHVFFAQRTTSKVPNVSD 300
Query: 298 IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 357
IGLKPR ++KVAVIGGGLMGSGI TA I + IYVVLKE+NSEYLLKGIK +EANVRGLVT
Sbjct: 301 IGLKPRQIKKVAVIGGGLMGSGIITALITSGIYVVLKEINSEYLLKGIKMVEANVRGLVT 360
Query: 358 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 417
RGKL+ DKA+ AL MLKGVLDYS+F+DVDMVIEAVIES+PLKQKIFSE+EKACPPHCILA
Sbjct: 361 RGKLSPDKADKALSMLKGVLDYSDFRDVDMVIEAVIESIPLKQKIFSEIEKACPPHCILA 420
Query: 418 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 477
TNTSTIDLN+VG+KTS+QD IIGAHFFSPAH+MPLLEIVRT++TS Q ILDLMTVGK IK
Sbjct: 421 TNTSTIDLNLVGKKTSAQDCIIGAHFFSPAHIMPLLEIVRTDKTSPQAILDLMTVGKSIK 480
Query: 478 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGY 537
KV VVVGNCTGFAVNR FFPY+Q A LLV+LGVDVFRID I +FGLP+GP QL DLAGY
Sbjct: 481 KVSVVVGNCTGFAVNRTFFPYAQGAHLLVNLGVDVFRIDRVICNFGLPMGPLQLQDLAGY 540
Query: 538 GVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPII 597
GVA A KEF AFPDR+F+SPLVDLL+KSGRNGK NGKG Y YEKGSKPKPDPSV+PII
Sbjct: 541 GVAVAVGKEFATAFPDRTFKSPLVDLLIKSGRNGKNNGKGYYIYEKGSKPKPDPSVIPII 600
Query: 598 EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSF 657
+E +RL+NIMP GKPIS++++EIVEMI FP+VNE+CRVLEEG+VVRASDLD ASVLGMSF
Sbjct: 601 QESQRLTNIMPNGKPISISDQEIVEMIFFPIVNEACRVLEEGVVVRASDLDIASVLGMSF 660
Query: 658 PSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSAPVSSSSTS 717
PSYRGGIVFWAD VG ++YTSLKKWS LYGNF+KPSRFLEERA KG+PLSAPVSSS S
Sbjct: 661 PSYRGGIVFWADTVGPKHIYTSLKKWSLLYGNFYKPSRFLEERALKGMPLSAPVSSSPGS 720
Query: 718 RARL 721
R+R+
Sbjct: 721 RSRM 724
>gi|315419009|gb|ADU15551.1| MFP [Gossypium hirsutum]
Length = 721
Score = 1174 bits (3037), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 585/725 (80%), Positives = 654/725 (90%), Gaps = 8/725 (1%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR 60
M+ +VTMEVGNDGVA+IT+ NPPVNALAIPI+ GLK+KF EAT RDDVKAIVLTG GGR
Sbjct: 1 MSQSKVTMEVGNDGVAVITISNPPVNALAIPIIDGLKEKFAEATRRDDVKAIVLTGKGGR 60
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
FSGGFDINVF KVHG GDVS+MPDVSV+LV N +EDCKKPIVAAVEGLALGGGLE AMGC
Sbjct: 61 FSGGFDINVFTKVHGTGDVSIMPDVSVDLVTNAVEDCKKPIVAAVEGLALGGGLEFAMGC 120
Query: 121 HARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 177
HARIAAP+TQLGLPEL+LGVIPG TQRLPRLVGLSKAIEMML SK I SEEG KLGLI
Sbjct: 121 HARIAAPRTQLGLPELSLGVIPGFGGTQRLPRLVGLSKAIEMMLSSKPIMSEEGKKLGLI 180
Query: 178 DAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 237
DA+V S+ELLKVS WALD+A RRKPW+RSLHRTDK+GSLSEAREVL++ARLQAKKTAPN
Sbjct: 181 DALVPSKELLKVSCAWALDMAERRKPWLRSLHRTDKIGSLSEAREVLRMARLQAKKTAPN 240
Query: 238 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 297
+PQHQ CLDVIEEGIVHGGYSGVLKEAKVFKE+V+ DTSRGLVHVF AQRATSKVPNVTD
Sbjct: 241 LPQHQVCLDVIEEGIVHGGYSGVLKEAKVFKEIVLSDTSRGLVHVFLAQRATSKVPNVTD 300
Query: 298 IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 357
+GLKPR V+KVA+IGGGLMGSGIATA I+NNI+VVLKEVNSEYLLKGIKT+EANVRGL
Sbjct: 301 VGLKPRQVKKVAIIGGGLMGSGIATALIVNNIFVVLKEVNSEYLLKGIKTVEANVRGLAN 360
Query: 358 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 417
RGK+T+DKA AL MLKGVLDYSEFKDVDMVIEAV+E+V LKQKIFSE+EKACPPHCILA
Sbjct: 361 RGKMTKDKAEKALSMLKGVLDYSEFKDVDMVIEAVVENVALKQKIFSEIEKACPPHCILA 420
Query: 418 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 477
TNTSTIDLN++GEK +SQDR++GAHFFSPAH+MPLLE VRT++ S Q+ILDLMTVGK+IK
Sbjct: 421 TNTSTIDLNLIGEKMNSQDRLVGAHFFSPAHLMPLLETVRTQKASPQIILDLMTVGKVIK 480
Query: 478 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGV-DVFRIDSAIRSFGLPIGPFQLLDLAG 536
KVPVVVGNCTGFAVNR FFPY+Q LLVSLGV D +RID I +FG P+GPFQL DLAG
Sbjct: 481 KVPVVVGNCTGFAVNRTFFPYTQGPHLLVSLGVDDAYRIDRVICNFGFPLGPFQLQDLAG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPI 596
YGVA A +E+ KAF DR F+SPL++LL K GRNGK NGKG Y YEKGSKPKPDPSVL I
Sbjct: 541 YGVAFAVGQEYAKAFSDRIFKSPLLELLAKDGRNGKNNGKGYYIYEKGSKPKPDPSVLSI 600
Query: 597 IEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMS 656
IEE RRL+NIMPGGKPISVT++E++EMILFPVVNE+CRVL+EG+VVRASDLD ASVLGMS
Sbjct: 601 IEESRRLTNIMPGGKPISVTDREVLEMILFPVVNEACRVLDEGVVVRASDLDVASVLGMS 660
Query: 657 FPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSAPVSSSST 716
FPSYRGGIVFWAD VGAN+VY +LKKWS GN +KPS+FLEERA KGIPLSAP +SS++
Sbjct: 661 FPSYRGGIVFWADMVGANHVYRNLKKWS---GN-YKPSKFLEERAMKGIPLSAPATSSAS 716
Query: 717 SRARL 721
+++RL
Sbjct: 717 TKSRL 721
>gi|406365505|gb|AFS41246.1| cinnamoyl-CoA hydratase-dehydrogenase [Petunia x hybrida]
Length = 724
Score = 1162 bits (3007), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 573/708 (80%), Positives = 635/708 (89%), Gaps = 3/708 (0%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR 60
MA +VTMEVG DGVA+IT+ NPPVNALAIPI+ LK+K+ EAT R+DVKAIVLTGNGGR
Sbjct: 1 MAQVKVTMEVGTDGVAVITIFNPPVNALAIPIINALKEKWTEATIRNDVKAIVLTGNGGR 60
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
FSGGFDINVFQKVHG GD+S MPDVSV+LVVN +EDCKKP VAA+EGLALGGGLELAMGC
Sbjct: 61 FSGGFDINVFQKVHGTGDISQMPDVSVDLVVNTMEDCKKPAVAAIEGLALGGGLELAMGC 120
Query: 121 HARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 177
HARIAAP+ QLGLPEL+LGV+PG TQRLPRL+GLSKA+EMM+ SK I SEEG KLGLI
Sbjct: 121 HARIAAPRAQLGLPELSLGVMPGFGGTQRLPRLIGLSKAVEMMMTSKPIMSEEGKKLGLI 180
Query: 178 DAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 237
DA+V S ELLKVSR WALDIA RRKPW+RSLH+TDK+GSLSEAREVLK+AR Q K+TA N
Sbjct: 181 DAIVPSSELLKVSRQWALDIAERRKPWMRSLHKTDKIGSLSEAREVLKVARQQVKQTAKN 240
Query: 238 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 297
MPQH AC+DVIEEGI+HGGY+GVLKEAKVFK+LV+ +TS+GLVHVFFAQRATSKVPNVTD
Sbjct: 241 MPQHVACIDVIEEGIIHGGYAGVLKEAKVFKDLVLSETSKGLVHVFFAQRATSKVPNVTD 300
Query: 298 IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 357
IGLKPR V+KVAVIGGGLMGSGIATA L+N +VVLKE+NSEYL KG+K IEANVRGLV
Sbjct: 301 IGLKPRTVKKVAVIGGGLMGSGIATALALSNTFVVLKEINSEYLQKGMKAIEANVRGLVA 360
Query: 358 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 417
R KL QDKA+ AL M+KG LDYS+FKDVDMVIEAVIESVPLKQKIFSE+EK CPPHCILA
Sbjct: 361 RKKLPQDKADKALSMVKGALDYSDFKDVDMVIEAVIESVPLKQKIFSEIEKVCPPHCILA 420
Query: 418 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 477
+NTSTIDLNI+GE T S+DRIIGAHFFSPAH+MPLLEIVRTE+TS Q ILDLM VGK IK
Sbjct: 421 SNTSTIDLNIIGENTRSKDRIIGAHFFSPAHIMPLLEIVRTEKTSTQAILDLMAVGKAIK 480
Query: 478 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGY 537
KVPVVVGNCTGFAVNR FFPYSQ A +LV+LGVD +RID+ I SFGLP+GP QL DL GY
Sbjct: 481 KVPVVVGNCTGFAVNRTFFPYSQGAHILVNLGVDAYRIDAQITSFGLPMGPLQLQDLTGY 540
Query: 538 GVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPII 597
GVA A KEF AF DR+F+SPL+DLL+KSGRNGK NGKG Y YEKGSKP+PD SVLPII
Sbjct: 541 GVAVAVGKEFGSAFSDRTFKSPLIDLLIKSGRNGKNNGKGFYIYEKGSKPRPDLSVLPII 600
Query: 598 EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSF 657
EE RRL+NIMPGGKPISVT++EIVEMILFPVVNE+CRVL+EGIVVRASDLD ASVLGMSF
Sbjct: 601 EESRRLTNIMPGGKPISVTDQEIVEMILFPVVNEACRVLDEGIVVRASDLDVASVLGMSF 660
Query: 658 PSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGI 705
PSYRGGIVFWAD VGA ++Y SL KWS+LYGNFFKPSRFLEERATKGI
Sbjct: 661 PSYRGGIVFWADTVGAGHIYKSLTKWSELYGNFFKPSRFLEERATKGI 708
>gi|356520511|ref|XP_003528905.1| PREDICTED: peroxisomal fatty acid beta-oxidation multifunctional
protein AIM1-like [Glycine max]
Length = 724
Score = 1152 bits (2979), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 571/724 (78%), Positives = 643/724 (88%), Gaps = 3/724 (0%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR 60
MA P+V EVG DGVA+IT+ NPPVNALAIPI+ GLK++F+EA R+DVKAIVLTG GGR
Sbjct: 1 MALPKVDFEVGTDGVAVITMCNPPVNALAIPIIMGLKNRFDEAARRNDVKAIVLTGKGGR 60
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
FSGGFDI+V QKVH GD S +PDVSVELVVN IED KKP+VAAVEGLALGGGLELAMGC
Sbjct: 61 FSGGFDISVMQKVHQTGDSSHLPDVSVELVVNSIEDSKKPVVAAVEGLALGGGLELAMGC 120
Query: 121 HARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 177
HAR+AAP+ QLGLPELTLG+IPG TQRLPRL+GLSKA+EMML SK ITSEEG K GLI
Sbjct: 121 HARVAAPRAQLGLPELTLGIIPGFGGTQRLPRLIGLSKAVEMMLTSKPITSEEGRKFGLI 180
Query: 178 DAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 237
DA+V+SEELLK SRLWAL+I RRKPWIRSLHRTDK+GSLSEAR VLK AR Q KKTAP+
Sbjct: 181 DAIVSSEELLKASRLWALEIGERRKPWIRSLHRTDKIGSLSEARAVLKTARQQVKKTAPH 240
Query: 238 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 297
+PQ QAC+DVIE GIVHGGYSGVLKEA+VFK+LV+ DTS+GL++VFFAQRA SKVP VTD
Sbjct: 241 LPQQQACVDVIEHGIVHGGYSGVLKEAEVFKQLVISDTSKGLINVFFAQRAISKVPGVTD 300
Query: 298 IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 357
IGLKPR V+K AVIGGGLMGSGIATA IL NI V+LKE+NSE+LLKGIKTIEANV GLV
Sbjct: 301 IGLKPRNVKKAAVIGGGLMGSGIATALILGNIRVILKEINSEFLLKGIKTIEANVNGLVR 360
Query: 358 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 417
RGKLT+ KA+ AL +LKGVLDYSEFKDVD+VIEAVIE++ LKQ IF +LEK CPPHCILA
Sbjct: 361 RGKLTKQKADAALSLLKGVLDYSEFKDVDLVIEAVIENISLKQTIFGDLEKICPPHCILA 420
Query: 418 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 477
+NTSTIDL++VG+ TSSQDRI GAHFFSPAH+MPLLEI+RT++TSAQVI+DL+TVGKIIK
Sbjct: 421 SNTSTIDLDVVGKTTSSQDRIAGAHFFSPAHIMPLLEIIRTDKTSAQVIVDLITVGKIIK 480
Query: 478 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGY 537
K PVVVGNCTGFAVN+ FFPYSQ A LLV+LGVDVFRID I +FG PIGPFQL DLAGY
Sbjct: 481 KAPVVVGNCTGFAVNKTFFPYSQGAHLLVNLGVDVFRIDRLICNFGFPIGPFQLQDLAGY 540
Query: 538 GVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPII 597
GVA ATSK F AF DR F+SPL+DLL+KSGRNGK NGKG Y YEKG KPKPDPS+LPII
Sbjct: 541 GVAVATSKVFADAFSDRIFKSPLLDLLIKSGRNGKNNGKGYYIYEKGGKPKPDPSILPII 600
Query: 598 EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSF 657
EE RRL NIMP GKPIS+T++EIVEMILFPVVNE+CRVLE+G+V+RASDLD ASVLGMSF
Sbjct: 601 EESRRLCNIMPNGKPISITDQEIVEMILFPVVNEACRVLEDGVVIRASDLDIASVLGMSF 660
Query: 658 PSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSAPVSSSSTS 717
P+YRGGIVFWAD VGAN+++TSLKKW+QLYGNF+KPSR+LEERA KGIPLSAP SS+ S
Sbjct: 661 PNYRGGIVFWADLVGANHIFTSLKKWAQLYGNFYKPSRYLEERALKGIPLSAPASSTPKS 720
Query: 718 RARL 721
ARL
Sbjct: 721 MARL 724
>gi|357500631|ref|XP_003620604.1| Peroxisomal fatty acid beta-oxidation multifunctional protein
[Medicago truncatula]
gi|355495619|gb|AES76822.1| Peroxisomal fatty acid beta-oxidation multifunctional protein
[Medicago truncatula]
Length = 722
Score = 1148 bits (2970), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 571/724 (78%), Positives = 641/724 (88%), Gaps = 5/724 (0%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR 60
MA+ +V EVGNDGVA+IT+ NPPVNALAIPI+ GLK+KFEEA R+DVKAIVLTG GGR
Sbjct: 1 MASVKVDFEVGNDGVAVITMCNPPVNALAIPIIRGLKNKFEEAARRNDVKAIVLTGKGGR 60
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
FSGGFDI+V QKVH GD++L+PDVSVELVVN IED KKP+VAAVEGLALGGGLELAMGC
Sbjct: 61 FSGGFDISVMQKVHQTGDITLVPDVSVELVVNSIEDSKKPVVAAVEGLALGGGLELAMGC 120
Query: 121 HARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 177
HAR+AAPK QLGLPELTLG+IPG TQRLPRLVG SKA+EMML SK IT+EEG KLGLI
Sbjct: 121 HARVAAPKAQLGLPELTLGIIPGFGGTQRLPRLVGTSKAVEMMLTSKPITAEEGQKLGLI 180
Query: 178 DAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 237
DA+V+ ELLK+SR WAL+IA +R+PWIRSLH TDKLGS +AREVL+ AR KKTAP+
Sbjct: 181 DAIVSPAELLKLSRQWALEIAEQRRPWIRSLHITDKLGS--DAREVLRTARQHVKKTAPH 238
Query: 238 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 297
+PQ QAC+DVIE GI+HGGYSGVL+EA+VFK+LV+ +T++GL+HVFFAQR SK+P VTD
Sbjct: 239 LPQQQACIDVIEHGILHGGYSGVLREAEVFKKLVLSETAKGLIHVFFAQRTISKIPGVTD 298
Query: 298 IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 357
IGLKPR VRK AVIGGGLMGSGIATA IL NI V+LKEVNSEYL KGIKTIEANVRGLVT
Sbjct: 299 IGLKPRNVRKAAVIGGGLMGSGIATALILGNIRVILKEVNSEYLQKGIKTIEANVRGLVT 358
Query: 358 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 417
R KLTQ KA AL +LKGVLDY+EFKDVDMVIEAVIE V LKQ IFS+LEK CPPHCILA
Sbjct: 359 RKKLTQQKAEGALSLLKGVLDYAEFKDVDMVIEAVIEKVSLKQDIFSDLEKICPPHCILA 418
Query: 418 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 477
+NTSTIDLNI+GEK SSQDR+IGAHFFSPAH+MPLLEIVRT +TSAQVILDL+TVGKIIK
Sbjct: 419 SNTSTIDLNIIGEKISSQDRVIGAHFFSPAHIMPLLEIVRTNKTSAQVILDLVTVGKIIK 478
Query: 478 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGY 537
K PVVVGNCTGFAVNR FFPY+Q A L +LGVDVFRID I +FGLP+GPFQL DL+GY
Sbjct: 479 KSPVVVGNCTGFAVNRTFFPYAQGAHFLANLGVDVFRIDRLISNFGLPMGPFQLQDLSGY 538
Query: 538 GVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPII 597
GVA A KEF +F R+F +PL+DLL+KSGRNGK NGKG Y YEKGSKPKPDPSVLPI+
Sbjct: 539 GVAVAVGKEFAGSFAGRTFPTPLLDLLIKSGRNGKNNGKGYYIYEKGSKPKPDPSVLPIV 598
Query: 598 EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSF 657
EE RRLSNIMP GKPIS+T++EIVEMILFPVVNE+CRVLEEGIV+RASDLD ASVLGMSF
Sbjct: 599 EESRRLSNIMPNGKPISITDQEIVEMILFPVVNEACRVLEEGIVIRASDLDIASVLGMSF 658
Query: 658 PSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSAPVSSSSTS 717
PSYRGGIVFWAD VGA ++Y+SLKKWSQLYGNF+KPSR+LEERATKGIPLSAP SS+ TS
Sbjct: 659 PSYRGGIVFWADLVGAKHIYSSLKKWSQLYGNFYKPSRYLEERATKGIPLSAPASSNPTS 718
Query: 718 RARL 721
+ARL
Sbjct: 719 KARL 722
>gi|449443155|ref|XP_004139346.1| PREDICTED: peroxisomal fatty acid beta-oxidation multifunctional
protein AIM1-like [Cucumis sativus]
Length = 724
Score = 1137 bits (2942), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 544/724 (75%), Positives = 629/724 (86%), Gaps = 3/724 (0%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR 60
MA P VTMEVGNDGVA+IT+ NPPVNALA + LK KFEEA R+DVKA+VLTG GGR
Sbjct: 1 MAEPSVTMEVGNDGVALITMSNPPVNALARSMFPALKSKFEEAMRRNDVKAVVLTGKGGR 60
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
FSGGFDINVF+ +H GD SL+PDVSV++ VN +ED KKPIVAA+EGLALGGGLE+A+
Sbjct: 61 FSGGFDINVFEMIHKTGDTSLLPDVSVDIAVNTMEDAKKPIVAAIEGLALGGGLEMALAS 120
Query: 121 HARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 177
HARIA PK QLGLPEL+LGVIPG TQRLPRL+GL KAIEMMLLSK+ITSEEG KLGLI
Sbjct: 121 HARIAVPKVQLGLPELSLGVIPGFGGTQRLPRLIGLPKAIEMMLLSKTITSEEGEKLGLI 180
Query: 178 DAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 237
DAVV+ EL+KV+R WALDIA RRKPWIR+LHRTD++GSL+EAR VLK AR QAKK APN
Sbjct: 181 DAVVSPNELMKVARKWALDIAERRKPWIRTLHRTDRIGSLAEARSVLKSAREQAKKIAPN 240
Query: 238 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 297
PQ AC+DVIE+GI+HGGYSGVLKE KVF+ELV DT++GLVHVFF+QR SKVPNVTD
Sbjct: 241 TPQQLACIDVIEDGIIHGGYSGVLKEDKVFRELVATDTAKGLVHVFFSQRLISKVPNVTD 300
Query: 298 IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 357
GLKPR V+KVA+IGGGLMGSGIATA IL+NI+VV+KE+N EYL KGIKTIEAN+RGLV
Sbjct: 301 RGLKPRNVKKVAIIGGGLMGSGIATAFILSNIHVVVKEINPEYLQKGIKTIEANLRGLVV 360
Query: 358 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 417
+GKLTQDKAN AL +LKG LDYS+FKDVDMVIEA +E+VPLKQKIFSE+EK CP HCILA
Sbjct: 361 KGKLTQDKANKALLILKGSLDYSDFKDVDMVIEAAVENVPLKQKIFSEIEKICPAHCILA 420
Query: 418 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 477
TNTSTIDLN+VGEKT S DRIIGAHFFSPAHVMPLLEIVRTE+TS QVILDLMTVGKIIK
Sbjct: 421 TNTSTIDLNLVGEKTRSMDRIIGAHFFSPAHVMPLLEIVRTEKTSPQVILDLMTVGKIIK 480
Query: 478 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGY 537
KVPVVVGNCTGFAVNR FFPY Q+A+LLV LGVD+FRID I +FGLP+GPFQL DL+GY
Sbjct: 481 KVPVVVGNCTGFAVNRTFFPYVQAAQLLVHLGVDLFRIDRVITNFGLPLGPFQLQDLSGY 540
Query: 538 GVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPII 597
GVA A KEF +FPDR SPLVDL+ K+GR+GK NGKG Y YEKGS+PKPDPS+ PI+
Sbjct: 541 GVATAVGKEFSASFPDRVLFSPLVDLMRKNGRDGKNNGKGYYIYEKGSRPKPDPSIAPIL 600
Query: 598 EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSF 657
EE RR++N+MP GKPI++++++I+EM+LFPVVNE CRV+EEGIVVR SDL+ A+VLGMSF
Sbjct: 601 EETRRIANLMPSGKPIAISDQQILEMVLFPVVNEGCRVVEEGIVVRPSDLNVATVLGMSF 660
Query: 658 PSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSAPVSSSSTS 717
PSYRGG++FW D VG +VY SLKKWS+ YG+FFKPS++LEERA KGIPLS +S ++ S
Sbjct: 661 PSYRGGLLFWGDLVGPKHVYASLKKWSEQYGDFFKPSKYLEERAAKGIPLSEAISENAAS 720
Query: 718 RARL 721
R++L
Sbjct: 721 RSKL 724
>gi|356531273|ref|XP_003534202.1| PREDICTED: peroxisomal fatty acid beta-oxidation multifunctional
protein AIM1-like [Glycine max]
Length = 724
Score = 1135 bits (2936), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 565/724 (78%), Positives = 642/724 (88%), Gaps = 3/724 (0%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR 60
MA P+V EVG DGVA+IT+ NPPVNALAIPI+ GLK++F+EA R+DVKAIVLTG GGR
Sbjct: 1 MALPKVDFEVGADGVAVITMCNPPVNALAIPIIMGLKNRFDEAARRNDVKAIVLTGKGGR 60
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
FSGGFDI+V QKVH GD S +PDVSVELVVN IED KKP+VAAV GLALGGGLELAMGC
Sbjct: 61 FSGGFDISVMQKVHRTGDSSHLPDVSVELVVNSIEDSKKPVVAAVAGLALGGGLELAMGC 120
Query: 121 HARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 177
HAR+AAP+ QLGLPELTLG+IPG TQRLPRL+GLSKA+EMML SK ITSEEG KLGLI
Sbjct: 121 HARVAAPRAQLGLPELTLGIIPGFGGTQRLPRLIGLSKAVEMMLTSKPITSEEGRKLGLI 180
Query: 178 DAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 237
DA+V+SEELL SRLWAL+I R KPW+RSLHRTDK+GSLSEAREVL+ AR Q KKT P+
Sbjct: 181 DAIVSSEELLNASRLWALEIGERCKPWVRSLHRTDKIGSLSEAREVLRTARQQVKKTVPH 240
Query: 238 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 297
+PQ AC+DVIE GIVHGGYSGVLKEA+VFK+LV+ DT++GL++VFF+QRA SKVP VTD
Sbjct: 241 LPQQLACVDVIEHGIVHGGYSGVLKEAEVFKQLVVSDTAKGLINVFFSQRAISKVPGVTD 300
Query: 298 IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 357
IGLKPR V+K AVIGGGLMGSGIATA IL NI+V+LKE+N E+LLKGIKTIEANV GLV
Sbjct: 301 IGLKPRNVKKAAVIGGGLMGSGIATALILGNIHVILKEINPEFLLKGIKTIEANVNGLVR 360
Query: 358 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 417
RGKLT+ KA+ AL +L+GVLDYSEFKDVD+VIEAVIE++ LKQ IFS+LEK CPPHCILA
Sbjct: 361 RGKLTKQKADAALSLLRGVLDYSEFKDVDLVIEAVIENISLKQTIFSDLEKICPPHCILA 420
Query: 418 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 477
+NTSTIDL++VG+ TSSQ+RI GAHFFSPAH+MPLLEI+RT++TSAQVILDL+TVGKIIK
Sbjct: 421 SNTSTIDLDVVGKTTSSQNRIAGAHFFSPAHIMPLLEIIRTDKTSAQVILDLITVGKIIK 480
Query: 478 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGY 537
K PVVVGNCTGFAVN+ FFPYSQ A LLV+LGVDVFRID+ IR+FG PIGPFQL DLAGY
Sbjct: 481 KTPVVVGNCTGFAVNKTFFPYSQGAHLLVNLGVDVFRIDTLIRNFGFPIGPFQLQDLAGY 540
Query: 538 GVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPII 597
GVA ATSK F AF DR F+SPL+DLL+KSGRNGK NGKG Y YEK KPKPDPS+LPII
Sbjct: 541 GVAVATSKVFADAFSDRIFKSPLLDLLIKSGRNGKNNGKGYYIYEKAGKPKPDPSILPII 600
Query: 598 EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSF 657
EE RRL NIMP GKPISVT++EIVEMILFPVVNE+CRVLE+G+V+RASDLD ASVLGMSF
Sbjct: 601 EESRRLCNIMPNGKPISVTDQEIVEMILFPVVNEACRVLEDGVVIRASDLDIASVLGMSF 660
Query: 658 PSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSAPVSSSSTS 717
P+YRGGIVFWAD VGAN++YTSLKKW+QLYGNF+KPSR+LEERA KGIPLSAP SS+ S
Sbjct: 661 PNYRGGIVFWADLVGANHIYTSLKKWAQLYGNFYKPSRYLEERALKGIPLSAPASSTPKS 720
Query: 718 RARL 721
ARL
Sbjct: 721 MARL 724
>gi|449515444|ref|XP_004164759.1| PREDICTED: peroxisomal fatty acid beta-oxidation multifunctional
protein AIM1-like [Cucumis sativus]
Length = 719
Score = 1123 bits (2904), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 540/724 (74%), Positives = 624/724 (86%), Gaps = 8/724 (1%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR 60
MA P VTMEVGNDGVA+IT+ NPPVNALA + LK KFEEA R+DVKA+VLTG GGR
Sbjct: 1 MAEPSVTMEVGNDGVALITMSNPPVNALARSMFPALKSKFEEAMRRNDVKAVVLTGKGGR 60
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
FSGGFDINVF+ +H GD SL+PDVSV++ VN +ED KKPIVAA+EGLALGGGLE+A+
Sbjct: 61 FSGGFDINVFEMIHKTGDTSLLPDVSVDIAVNTMEDAKKPIVAAIEGLALGGGLEMALAS 120
Query: 121 HARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 177
HARIA PK QLGLPEL+LGVIPG TQRLPRL+GL KAIEMMLLSK+ITSEEG KLGLI
Sbjct: 121 HARIAVPKVQLGLPELSLGVIPGFGGTQRLPRLIGLPKAIEMMLLSKTITSEEGEKLGLI 180
Query: 178 DAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 237
DAVV+ EL+KV+R WALDIA RRKPWIR+LHRTD++GSL+EAR VLK AR QAKK APN
Sbjct: 181 DAVVSPNELMKVARKWALDIAERRKPWIRTLHRTDRIGSLAEARSVLKSAREQAKKIAPN 240
Query: 238 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 297
PQ AC+DVIE+GI+HGGYSGVLKE KVF+ELV DT++GLVHVFF VPNVTD
Sbjct: 241 TPQQLACIDVIEDGIIHGGYSGVLKEDKVFRELVATDTAKGLVHVFFPS-----VPNVTD 295
Query: 298 IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 357
GLKPR V+KVA+IGGGLMGSGIATA IL+NI+VV+KE+N EYL KGIKTIEAN+RGLV
Sbjct: 296 RGLKPRNVKKVAIIGGGLMGSGIATAFILSNIHVVVKEINPEYLQKGIKTIEANLRGLVV 355
Query: 358 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 417
+GKLTQDKAN AL +LKG LDYS+FKDVDMVIEA +E+VPLKQKIFSE+EK CP HCILA
Sbjct: 356 KGKLTQDKANKALLILKGSLDYSDFKDVDMVIEAAVENVPLKQKIFSEIEKICPAHCILA 415
Query: 418 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 477
TNTSTIDLN+VGEKT S DRIIGAHFFSPAHVMPLLEIVRTE+TS QVILDLMTVGKIIK
Sbjct: 416 TNTSTIDLNLVGEKTRSMDRIIGAHFFSPAHVMPLLEIVRTEKTSPQVILDLMTVGKIIK 475
Query: 478 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGY 537
KVPVVVGNCTGFAVNR FFPY Q+A+LLV LGVD+FRID I +FGLP+GPFQL DL+GY
Sbjct: 476 KVPVVVGNCTGFAVNRTFFPYVQAAQLLVHLGVDLFRIDRVITNFGLPLGPFQLQDLSGY 535
Query: 538 GVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPII 597
GVA A KEF +FPDR SPLVDL+ K+GR+GK NGKG Y YEKGS+PKPDPS+ PI+
Sbjct: 536 GVATAVGKEFSASFPDRVLFSPLVDLMRKNGRDGKNNGKGYYIYEKGSRPKPDPSIAPIL 595
Query: 598 EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSF 657
EE RR++N+MP GKPI++++++I+EM+LFPVVNE CRV+EEGIVVR SDL+ A+VLGMSF
Sbjct: 596 EETRRIANLMPSGKPIAISDQQILEMVLFPVVNEGCRVVEEGIVVRPSDLNVATVLGMSF 655
Query: 658 PSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSAPVSSSSTS 717
PSYRGG++FW D VG +VY SLKKWS+ YG+FFKPS++LEERA KGIPLS +S ++ S
Sbjct: 656 PSYRGGLLFWGDLVGPKHVYASLKKWSEQYGDFFKPSKYLEERAAKGIPLSEAISENAAS 715
Query: 718 RARL 721
R++L
Sbjct: 716 RSKL 719
>gi|147827212|emb|CAN66465.1| hypothetical protein VITISV_006222 [Vitis vinifera]
Length = 859
Score = 1092 bits (2825), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 552/794 (69%), Positives = 622/794 (78%), Gaps = 88/794 (11%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIP--------------------IVAGLKDKF 40
M+ VTMEVGNDGVA+IT+ NPPVNALA+ ++AGLK+K+
Sbjct: 1 MSKAEVTMEVGNDGVAVITMSNPPVNALALASTVYISEFLWNFDFGSLILCVIAGLKEKY 60
Query: 41 EEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKP 100
EA R+DVKAIV+TG GGRFSGGFDINVFQKVH D+S +PD S++L+VN +ED KKP
Sbjct: 61 AEAMRRNDVKAIVVTGKGGRFSGGFDINVFQKVHKTADISHLPDASIDLLVNTVEDAKKP 120
Query: 101 IVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAI 157
VAAVEGLALGGGLE+AM CHARIAAPKTQLGLPEL+LGV PG TQRLPRLVGLSKAI
Sbjct: 121 SVAAVEGLALGGGLEVAMACHARIAAPKTQLGLPELSLGVXPGFGGTQRLPRLVGLSKAI 180
Query: 158 EMM-----------LLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIR 206
EMM LSKSI+SEEG+KLGL+DA+V+SEELLKVSR WALDI +RKPW+R
Sbjct: 181 EMMRLPLSDVNKFLQLSKSISSEEGYKLGLVDAIVSSEELLKVSRRWALDIVDKRKPWVR 240
Query: 207 SLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKV 266
SLH+T+KLGS+SEA +LK++R QA+KT P++PQHQACLDVIEEGIVHGGYSG+LKE KV
Sbjct: 241 SLHQTEKLGSVSEALXILKISRQQARKTVPHLPQHQACLDVIEEGIVHGGYSGLLKETKV 300
Query: 267 F--------------------------KELVMLDTSR----------------------- 277
F ++L+MLD S
Sbjct: 301 FNXLVLSDTAKGLIHVFFAQRATSKALQKLLMLDPSLRTIYWLCWGQGPGHSCLCVGYLP 360
Query: 278 -----GLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVV 332
G + VPNVTDIGLKPR V+KVAVIGGGLMGSGIATA I +NIYVV
Sbjct: 361 IELPVGAITALMQNLILGTVPNVTDIGLKPRNVKKVAVIGGGLMGSGIATALITSNIYVV 420
Query: 333 LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAV 392
LKEVNSEYLLKGIKTIEANVRGLVT+GKLTQDKA AL MLKGVLDYSEFKD+DMVIEAV
Sbjct: 421 LKEVNSEYLLKGIKTIEANVRGLVTKGKLTQDKARKALSMLKGVLDYSEFKDIDMVIEAV 480
Query: 393 IESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPL 452
IE++ LKQKIFSE+EK C PHCILATNTSTIDLN+VGEKTSSQDRIIGAHFFSPAHVMPL
Sbjct: 481 IENIXLKQKIFSEIEKICSPHCILATNTSTIDLNLVGEKTSSQDRIIGAHFFSPAHVMPL 540
Query: 453 LEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDV 512
LE+VRTE+TSAQVILDLMTVGK IKK+PVVVG+CTGFAVNR FFPY+Q A LV+LGVD
Sbjct: 541 LEVVRTEKTSAQVILDLMTVGKAIKKIPVVVGSCTGFAVNRTFFPYAQGAHFLVNLGVDP 600
Query: 513 FRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGK 572
FRID I +FGLP+GPFQL DL+GYGVA A KEF AF R+F+SPLV+LLLK+GRNGK
Sbjct: 601 FRIDWVISNFGLPMGPFQLQDLSGYGVAVAVGKEFATAFQGRTFESPLVNLLLKNGRNGK 660
Query: 573 ANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNES 632
NGKG Y YEKGSKP+PDPSVLPIIEE RRL+NIMPGGKPISV +EI+EMILFPVVNE+
Sbjct: 661 QNGKGYYIYEKGSKPRPDPSVLPIIEESRRLANIMPGGKPISVXNQEILEMILFPVVNEA 720
Query: 633 CRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFK 692
CRVL+EG+VVRASDLD SVLGMSFPSYRGGIVFWAD VG Y YT LKKWS +YG FFK
Sbjct: 721 CRVLDEGVVVRASDLDITSVLGMSFPSYRGGIVFWADEVGPYYXYTCLKKWSAMYGTFFK 780
Query: 693 PSRFLEERATKGIP 706
PS +LE+RATKGIP
Sbjct: 781 PSSYLEQRATKGIP 794
>gi|297799088|ref|XP_002867428.1| hypothetical protein ARALYDRAFT_491857 [Arabidopsis lyrata subsp.
lyrata]
gi|297313264|gb|EFH43687.1| hypothetical protein ARALYDRAFT_491857 [Arabidopsis lyrata subsp.
lyrata]
Length = 721
Score = 1091 bits (2822), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 537/719 (74%), Positives = 629/719 (87%), Gaps = 7/719 (0%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
VTM+VGNDGVA+IT+ NPPVN+LA PI++GLK+KF +A R+DVKAIVLTGN GRFSGGF
Sbjct: 7 VTMDVGNDGVAVITISNPPVNSLASPIISGLKEKFRDANQRNDVKAIVLTGNNGRFSGGF 66
Query: 66 DINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA 125
DINVFQ+VH GD+SLMP+VSVELV NL+ED +KP+VAAVEGLALGGGLELAM CHAR+A
Sbjct: 67 DINVFQQVHKTGDLSLMPEVSVELVCNLMEDSRKPLVAAVEGLALGGGLELAMACHARVA 126
Query: 126 APKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 182
APK QLGLPELTLGVIPG TQRLPRLVGL+KA +M+LLSKSI+SEEG KLGLIDA+V
Sbjct: 127 APKAQLGLPELTLGVIPGFGGTQRLPRLVGLAKATDMILLSKSISSEEGQKLGLIDALVP 186
Query: 183 SEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQ 242
++L SR WALDIA RKP++RSLHRTDK+GSLSEAR +LK +R AKK APNMPQH
Sbjct: 187 PGDVLSTSRKWALDIADGRKPFLRSLHRTDKIGSLSEARAILKNSRQLAKKVAPNMPQHH 246
Query: 243 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 302
AC++VIEEGIVHGGYSGVLKEA+VFK+LV+ DT++GLVHVFFAQRATSKVPNVTD+GLKP
Sbjct: 247 ACIEVIEEGIVHGGYSGVLKEAEVFKQLVLSDTAKGLVHVFFAQRATSKVPNVTDVGLKP 306
Query: 303 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 362
R ++KVAVIGGGLMGSGI TA +L+NI VVLKE+NSEYL+KG K++EAN++GLV+RGKLT
Sbjct: 307 RPIKKVAVIGGGLMGSGITTALLLSNIRVVLKEINSEYLMKGTKSVEANIKGLVSRGKLT 366
Query: 363 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 422
QDKA AL + KGVLDY+EFKDVDMVIEAVIE++ LKQ IF E+EK C PHCILA+NTST
Sbjct: 367 QDKAGKALSLFKGVLDYTEFKDVDMVIEAVIENIQLKQNIFKEIEKVCSPHCILASNTST 426
Query: 423 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 482
IDL+++GEKT+S+DRI+GAHFFSPAH+M LLEIVR++ TSAQVILDLM VGK IKKVPVV
Sbjct: 427 IDLDVIGEKTNSKDRIVGAHFFSPAHLMTLLEIVRSKNTSAQVILDLMAVGKAIKKVPVV 486
Query: 483 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAA 542
VGNC GFAVNR FFPY+Q+A +L +LGVD+FRIDS I SFGLP+GPFQL DLAG+G+ A
Sbjct: 487 VGNCIGFAVNRTFFPYTQAAHMLANLGVDLFRIDSVITSFGLPLGPFQLGDLAGHGIGLA 546
Query: 543 TSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRR 602
+ K + DR F+SP+ +LLLKSGRNGK NGKG Y YEKGSKPKPDPSVL I+EE R+
Sbjct: 547 VGPIYAKVYGDRMFRSPMTELLLKSGRNGKINGKGYYIYEKGSKPKPDPSVLSIVEESRK 606
Query: 603 LSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRG 662
L+NIMPGGKPISV++KEIVEMILFPVVNE+CRVL+EG+V+RASDLD ASVLGMSFPSYRG
Sbjct: 607 LTNIMPGGKPISVSDKEIVEMILFPVVNEACRVLDEGVVIRASDLDIASVLGMSFPSYRG 666
Query: 663 GIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSAPVSSSSTSRARL 721
GIVFWAD VG Y+Y LK+ S+ YG+FFKPSR+LEERA G+ L S S +SR+RL
Sbjct: 667 GIVFWADTVGPKYIYERLKRLSETYGSFFKPSRYLEERAMNGMLL----SESKSSRSRL 721
>gi|15235527|ref|NP_194630.1| enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Arabidopsis
thaliana]
gi|75315624|sp|Q9ZPI6.1|AIM1_ARATH RecName: Full=Peroxisomal fatty acid beta-oxidation multifunctional
protein AIM1; AltName: Full=Protein ABNORMAL
INFLORESCENCE MERISTEM 1; Short=AtAIM1; Includes:
RecName: Full=Enoyl-CoA hydratase/3-2-trans-enoyl-CoA
isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|4337025|gb|AAD18041.1| AIM1 protein [Arabidopsis thaliana]
gi|4972047|emb|CAB43915.1| AIM1 protein [Arabidopsis thaliana]
gi|7269799|emb|CAB79659.1| AIM1 protein [Arabidopsis thaliana]
gi|16648891|gb|AAL24297.1| AIM1 protein [Arabidopsis thaliana]
gi|18175606|gb|AAL59895.1| putative AIM1 protein [Arabidopsis thaliana]
gi|20465649|gb|AAM20293.1| putative AIM1 protein [Arabidopsis thaliana]
gi|332660172|gb|AEE85572.1| enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Arabidopsis
thaliana]
Length = 721
Score = 1088 bits (2814), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 535/719 (74%), Positives = 629/719 (87%), Gaps = 7/719 (0%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
VTMEVGNDGVA+IT+ NPPVN+LA PI++GLK+KF +A R+DVKAIVL GN GRFSGGF
Sbjct: 7 VTMEVGNDGVAVITISNPPVNSLASPIISGLKEKFRDANQRNDVKAIVLIGNNGRFSGGF 66
Query: 66 DINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA 125
DINVFQ+VH GD+SLMP+VSVELV NL+ED +KP+VAAVEGLALGGGLELAM CHAR+A
Sbjct: 67 DINVFQQVHKTGDLSLMPEVSVELVCNLMEDSRKPVVAAVEGLALGGGLELAMACHARVA 126
Query: 126 APKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 182
APK QLGLPELTLGVIPG TQRLPRLVGL+KA +M+LLSKSI+SEEG KLGLIDA+V
Sbjct: 127 APKAQLGLPELTLGVIPGFGGTQRLPRLVGLAKATDMILLSKSISSEEGHKLGLIDALVP 186
Query: 183 SEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQ 242
++L SR WALDIA RKP+++SLHRTDK+GSLSEAR +LK +R AKK APNMPQH
Sbjct: 187 PGDVLSTSRKWALDIAEGRKPFLQSLHRTDKIGSLSEARAILKNSRQLAKKIAPNMPQHH 246
Query: 243 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 302
AC++VIEEGI+HGGYSGVLKEA+VFK+LV+ DT++GLVHVFFAQRATSKVPNVTD+GLKP
Sbjct: 247 ACIEVIEEGIIHGGYSGVLKEAEVFKQLVLSDTAKGLVHVFFAQRATSKVPNVTDVGLKP 306
Query: 303 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 362
R ++KVAVIGGGLMGSGIATA +L+NI VVLKE+NSE+L+KGIK++EAN++ LV+RGKLT
Sbjct: 307 RPIKKVAVIGGGLMGSGIATALLLSNIRVVLKEINSEFLMKGIKSVEANMKSLVSRGKLT 366
Query: 363 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 422
QDKA AL + KGVLDY+EF DVDMVIEAVIE++ LKQ IF E+EK C PHCILA+NTST
Sbjct: 367 QDKAGKALSLFKGVLDYTEFNDVDMVIEAVIENIQLKQNIFKEIEKVCSPHCILASNTST 426
Query: 423 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 482
IDL+++GEKT+S+DRI+GAHFFSPAH+MPLLEIVR++ TSAQVILDLM VGK IKKVPVV
Sbjct: 427 IDLDVIGEKTNSKDRIVGAHFFSPAHLMPLLEIVRSKNTSAQVILDLMAVGKAIKKVPVV 486
Query: 483 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAA 542
VGNC GFAVNR FFPYSQ+A +L +LGVD+FRIDS I SFGLP+GPFQL DLAG+G+ A
Sbjct: 487 VGNCIGFAVNRTFFPYSQAAHMLANLGVDLFRIDSVITSFGLPLGPFQLGDLAGHGIGLA 546
Query: 543 TSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRR 602
+ K + DR F+SP+ +LLLKSGRNGK NG+G Y YEKGSKPKPDPSVL I+E+ R+
Sbjct: 547 VGPIYAKVYGDRMFRSPMTELLLKSGRNGKINGRGYYIYEKGSKPKPDPSVLSIVEKSRK 606
Query: 603 LSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRG 662
L+NIMPGGKPISVT+KEIVEMILFPVVNE+CRVL+EG+V+RASDLD ASVLGMSFPSYRG
Sbjct: 607 LTNIMPGGKPISVTDKEIVEMILFPVVNEACRVLDEGVVIRASDLDIASVLGMSFPSYRG 666
Query: 663 GIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSAPVSSSSTSRARL 721
GIVFWAD VG Y+Y LKK S+ YG+FFKPSR+LEERA G+ L S S +SR++L
Sbjct: 667 GIVFWADTVGPKYIYERLKKLSETYGSFFKPSRYLEERAMNGMLL----SESKSSRSKL 721
>gi|326524910|dbj|BAK04391.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326525701|dbj|BAJ88897.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 728
Score = 1035 bits (2676), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/721 (70%), Positives = 608/721 (84%), Gaps = 4/721 (0%)
Query: 5 RVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGG 64
RVTMEVG DGVA+IT+ NPPVNAL I+ GLKDK+ EA RDDV+A+VLTG G+F GG
Sbjct: 8 RVTMEVGADGVALITICNPPVNALHPIIIQGLKDKYAEAFHRDDVRAVVLTGAVGKFCGG 67
Query: 65 FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
FDINVF KVH GDVS +PD+S ELV N++ED KKP VAA++GLALGGGLEL MGCHARI
Sbjct: 68 FDINVFSKVHDTGDVSHLPDMSFELVSNMMEDGKKPSVAAIQGLALGGGLELTMGCHARI 127
Query: 125 AAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVV 181
A P+ QLGLPELTLGVIPG TQRLPRLVGL KAIEMML SK IT++EG + GLIDA+
Sbjct: 128 ATPEAQLGLPELTLGVIPGAGGTQRLPRLVGLPKAIEMMLQSKFITAKEGKERGLIDALC 187
Query: 182 TSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 241
+ +EL+K+SR WAL+IA RKPWIRSL RTD+LGSLSEAR VL +AR QA K A NMPQH
Sbjct: 188 SPDELIKMSRFWALEIANHRKPWIRSLGRTDRLGSLSEARAVLSMARQQANKAAANMPQH 247
Query: 242 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 301
QACLDVIEEG+++GG++GV+KEAKVFKELV+ TSR LVHVFFAQR+T+KVP VTDI LK
Sbjct: 248 QACLDVIEEGVLYGGHAGVVKEAKVFKELVVSTTSRALVHVFFAQRSTTKVPGVTDIQLK 307
Query: 302 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 361
PR +RKVAVIGGGLMGSGIATA ++ NI VVLKEVN ++L +G KTI N+ GLV RG L
Sbjct: 308 PRNIRKVAVIGGGLMGSGIATALLVGNISVVLKEVNPQFLQRGQKTIAGNLEGLVKRGSL 367
Query: 362 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 421
T+DK + A+ +LKG LDYS+FKDVDMVIEAVIE VPLKQ IF+++EK CPPHCILATNTS
Sbjct: 368 TKDKMSKAISLLKGALDYSDFKDVDMVIEAVIEKVPLKQSIFADIEKICPPHCILATNTS 427
Query: 422 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 481
TIDLN+VGEKT+SQDRIIGAHFFSPAH+MPLLEIVRTE+TS Q ILDL+TVGKIIKKVPV
Sbjct: 428 TIDLNVVGEKTNSQDRIIGAHFFSPAHIMPLLEIVRTEKTSPQAILDLITVGKIIKKVPV 487
Query: 482 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAA 541
VVGNCTGFAVNR FFPY+Q A+LLVSLG+D+FRID I +FG+P+GPFQL DLAGYGVA
Sbjct: 488 VVGNCTGFAVNRTFFPYTQGAQLLVSLGIDLFRIDRIISNFGMPMGPFQLQDLAGYGVAL 547
Query: 542 ATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECR 601
A + AF R+F S LVDL+ ++GR GK+NGKG Y YEKG++PKPDPSV +I+E R
Sbjct: 548 AVKDIYAAAFGTRNFDSVLVDLMAETGRQGKSNGKGYYLYEKGARPKPDPSVQNVIDEYR 607
Query: 602 RLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYR 661
R + MPGGKP+++++++I+EM+ FPVVNE+CRV++E +V+RA+DLD ASVLGM FP YR
Sbjct: 608 RQAKTMPGGKPVTLSDQDILEMVFFPVVNEACRVMDENVVIRAADLDIASVLGMGFPKYR 667
Query: 662 GGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSAPVSSSSTS-RAR 720
GG++FWAD VGA+Y+++ L KW+++YG+FFKPS +LEERA G PL+AP ++ S R+R
Sbjct: 668 GGLIFWADTVGASYIHSKLSKWAEMYGDFFKPSLYLEERAKSGRPLAAPRTAHQVSTRSR 727
Query: 721 L 721
+
Sbjct: 728 M 728
>gi|242061308|ref|XP_002451943.1| hypothetical protein SORBIDRAFT_04g010370 [Sorghum bicolor]
gi|241931774|gb|EES04919.1| hypothetical protein SORBIDRAFT_04g010370 [Sorghum bicolor]
Length = 727
Score = 1035 bits (2676), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/721 (70%), Positives = 606/721 (84%), Gaps = 4/721 (0%)
Query: 5 RVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGG 64
RVTMEVG DGVA+IT+ NPPVNAL I+AGLKDK+ EA RDDVKAIVLTG GG+F GG
Sbjct: 7 RVTMEVGADGVALITIANPPVNALHPIIIAGLKDKYAEAMRRDDVKAIVLTGAGGKFCGG 66
Query: 65 FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
FDINVF KVH GDVSLMPDVSVELV N++E+ KKP VAA++GLALGGGLEL MGCHARI
Sbjct: 67 FDINVFTKVHQTGDVSLMPDVSVELVSNMMEEGKKPSVAAIQGLALGGGLELIMGCHARI 126
Query: 125 AAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVV 181
+ P+ QLGLPELTLG+IPG TQRLPRLVGL KAIEMML SK IT++EG + GLIDA+
Sbjct: 127 STPEAQLGLPELTLGIIPGFGGTQRLPRLVGLPKAIEMMLQSKFITAKEGKERGLIDALC 186
Query: 182 TSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 241
+ +EL+K SRLWAL+IA RKPW+RSL RTD+LGSLSEAR VL AR QA K APNMPQH
Sbjct: 187 SPDELIKTSRLWALEIANCRKPWMRSLGRTDRLGSLSEARAVLNAARQQAMKIAPNMPQH 246
Query: 242 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 301
QACLDV+EEGI++GG +GVLKEAKVFKELV+ TS+ LVHVFFAQR+T+KVP VTD+ LK
Sbjct: 247 QACLDVMEEGILYGGQAGVLKEAKVFKELVIAPTSKALVHVFFAQRSTTKVPGVTDVQLK 306
Query: 302 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 361
PR +RKVAVIGGGLMGSGIAT+ +++NI VVLKEVN ++L +G K I N+ GLV RG L
Sbjct: 307 PRPIRKVAVIGGGLMGSGIATSLLVSNISVVLKEVNPQFLQRGEKMIAGNLEGLVKRGSL 366
Query: 362 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 421
T+D+ + A+ +LKG LDYS+FKDVDMVIEAVIE +PLKQ IFS++EK CP HCILATNTS
Sbjct: 367 TKDRMHKAMSLLKGALDYSDFKDVDMVIEAVIEKIPLKQSIFSDIEKICPKHCILATNTS 426
Query: 422 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 481
TIDLN+VGEKT+SQDRIIGAHFFSPAH+MPLLEIVRTE+TS Q ILDL+TVGKIIKKVPV
Sbjct: 427 TIDLNVVGEKTNSQDRIIGAHFFSPAHIMPLLEIVRTEKTSPQAILDLITVGKIIKKVPV 486
Query: 482 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAA 541
VVGNCTGFAVNR FFPY+Q + LLVSLG+DVFRID I SFG+P+GPFQL D+AGYGVA
Sbjct: 487 VVGNCTGFAVNRTFFPYTQGSHLLVSLGIDVFRIDRVISSFGMPMGPFQLQDVAGYGVAL 546
Query: 542 ATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECR 601
A + AF +R+ S LVDL++K GR GK NGKG Y YEKG KPKPDPSV ++EE +
Sbjct: 547 AVKGIYADAFGERNLNSNLVDLMVKDGRQGKVNGKGYYIYEKGGKPKPDPSVKHVLEEYQ 606
Query: 602 RLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYR 661
+ +N MPGGKP+++T+++I+EMI FPVVNE+CRV++E +V+RASDLD ASVLGM FP YR
Sbjct: 607 KQANTMPGGKPVTLTDQDILEMIFFPVVNEACRVMDENVVIRASDLDIASVLGMGFPKYR 666
Query: 662 GGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSAP-VSSSSTSRAR 720
GG+VFWAD VGA Y+++ L KW+++YG FFKPS +LE+RA G+PLSA S ++R+R
Sbjct: 667 GGLVFWADTVGAPYIHSKLSKWAEIYGPFFKPSSYLEQRAKSGVPLSAKGASQQGSARSR 726
Query: 721 L 721
+
Sbjct: 727 M 727
>gi|326525937|dbj|BAJ93145.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 728
Score = 1032 bits (2669), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 504/721 (69%), Positives = 607/721 (84%), Gaps = 4/721 (0%)
Query: 5 RVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGG 64
RVTMEVG DGVA+IT+ NPPVNAL I+ GLKDK+ EA RDDV+A+VLTG G+F GG
Sbjct: 8 RVTMEVGADGVALITICNPPVNALHPIIIQGLKDKYAEAFHRDDVRAVVLTGAVGKFCGG 67
Query: 65 FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
FDINVF KVH GDVS +PD+S ELV N++ED KKP VAA++GLALGGGLEL MGCHARI
Sbjct: 68 FDINVFSKVHDTGDVSHLPDMSFELVSNMMEDGKKPSVAAIQGLALGGGLELTMGCHARI 127
Query: 125 AAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVV 181
A P+ QLGLPELTLGVIPG TQRLPRLVGL KAIEMML SK IT++EG + GLIDA+
Sbjct: 128 ATPEAQLGLPELTLGVIPGAGGTQRLPRLVGLPKAIEMMLQSKFITAKEGKERGLIDALC 187
Query: 182 TSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 241
+ +EL+K+SR WAL+IA RKPWIRSL RTD+LGSLSEAR VL +AR QA K A NMPQH
Sbjct: 188 SPDELIKMSRFWALEIANHRKPWIRSLGRTDRLGSLSEARAVLSMARQQANKAAANMPQH 247
Query: 242 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 301
QACLDVIEEG+++GG++GV+KEAKVFKELV+ TSR LVHVFFAQR+T+KVP VTDI LK
Sbjct: 248 QACLDVIEEGVLYGGHAGVVKEAKVFKELVVSTTSRALVHVFFAQRSTTKVPGVTDIQLK 307
Query: 302 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 361
PR +RKVAVIGGGLMGSGIATA ++ NI VVLKEVN ++L +G KTI N+ GLV RG L
Sbjct: 308 PRNIRKVAVIGGGLMGSGIATALLVGNISVVLKEVNPQFLQRGQKTIAGNLEGLVKRGSL 367
Query: 362 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 421
T+DK + A+ +LKG LDYS+FKDVDMVIEAVIE VPLKQ IF+++EK CPPHCILATNTS
Sbjct: 368 TKDKMSKAISLLKGALDYSDFKDVDMVIEAVIEKVPLKQSIFADIEKICPPHCILATNTS 427
Query: 422 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 481
TID N+VGEKT+SQDRIIGAHFFSPAH+MPLLEIVRTE+TS Q ILDL+TVGKIIKKVPV
Sbjct: 428 TIDSNVVGEKTNSQDRIIGAHFFSPAHIMPLLEIVRTEKTSPQAILDLITVGKIIKKVPV 487
Query: 482 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAA 541
VVGNCTGFAVNR FFPY+Q A+LLVSLG+D+FRID I +FG+P+GPFQL DLAGYGVA
Sbjct: 488 VVGNCTGFAVNRTFFPYTQGAQLLVSLGIDLFRIDRIISNFGMPMGPFQLQDLAGYGVAL 547
Query: 542 ATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECR 601
A + AF R+F S LVDL+ ++GR GK+NGKG Y YEKG++PKPDPSV +I+E R
Sbjct: 548 AVKDIYAAAFGTRNFDSVLVDLMAETGRQGKSNGKGYYLYEKGARPKPDPSVQNVIDEYR 607
Query: 602 RLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYR 661
R + MPGGKP+++++++I+EM+ FPVVNE+CRV++E +V+RA+DLD ASVLGM FP YR
Sbjct: 608 RQAKTMPGGKPVTLSDQDILEMVFFPVVNEACRVMDENVVIRAADLDIASVLGMGFPKYR 667
Query: 662 GGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSAPVSSSSTS-RAR 720
GG++FWAD VGA+Y+++ L KW+++YG+FFKPS +LEERA G PL+AP ++ S R+R
Sbjct: 668 GGLIFWADTVGASYIHSKLSKWAEMYGDFFKPSLYLEERAKSGRPLAAPRTAHQVSTRSR 727
Query: 721 L 721
+
Sbjct: 728 M 728
>gi|218190472|gb|EEC72899.1| hypothetical protein OsI_06722 [Oryza sativa Indica Group]
Length = 726
Score = 1032 bits (2669), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/723 (69%), Positives = 608/723 (84%), Gaps = 4/723 (0%)
Query: 3 APRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFS 62
A RVTMEVG DGVA++T+ NPPVNAL I+ GLK+K+ EA RDDVKAIVLTG GG+F
Sbjct: 4 AIRVTMEVGADGVAVVTICNPPVNALHPIIIQGLKEKYAEAMDRDDVKAIVLTGAGGKFC 63
Query: 63 GGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHA 122
GGFDINVF +VH G+VSLMPDVSVELV NL+E KKP VAA++GLALGGGLEL MGCHA
Sbjct: 64 GGFDINVFTEVHKTGNVSLMPDVSVELVSNLMEAGKKPSVAAIQGLALGGGLELTMGCHA 123
Query: 123 RIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDA 179
RI+ P+ QLGLPELTLG+IPG TQRLPRLVGL KAIEMML SK IT++EG + GL+DA
Sbjct: 124 RISTPEAQLGLPELTLGIIPGFGGTQRLPRLVGLPKAIEMMLQSKFITAKEGKERGLVDA 183
Query: 180 VVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMP 239
+ + +EL+K+SRLWAL+IA RKPWIRSL RTD+LGSLSEAR V+ AR QAKK A N+P
Sbjct: 184 LCSPDELIKMSRLWALEIANYRKPWIRSLARTDRLGSLSEARSVINSARQQAKKVAANLP 243
Query: 240 QHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIG 299
QHQACLDV+EEG++ GG++GVLKEAKVFKELV+ TS+ LVH FFAQR T+KVP VTD+
Sbjct: 244 QHQACLDVMEEGVLCGGHAGVLKEAKVFKELVLSPTSKALVHAFFAQRLTTKVPGVTDVQ 303
Query: 300 LKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRG 359
LKPR +RKVAVIGGGLMGSGIATA +++N VVLKEVN ++L +G K I AN+ GLV RG
Sbjct: 304 LKPRKIRKVAVIGGGLMGSGIATALLVSNTSVVLKEVNPQFLQRGQKMIAANLEGLVKRG 363
Query: 360 KLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATN 419
LT+DK N A+ +LKG LDYS+FKDVDMVIEAVIE +PLKQ IFS+LEK CPPHCILATN
Sbjct: 364 SLTKDKMNKAMSLLKGALDYSDFKDVDMVIEAVIEKIPLKQSIFSDLEKVCPPHCILATN 423
Query: 420 TSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKV 479
TSTIDLN+VGEKT+SQDRIIGAHFFSPAH+MPLLEIVRTE+TS Q ILDL+TVGK+IKKV
Sbjct: 424 TSTIDLNVVGEKTNSQDRIIGAHFFSPAHIMPLLEIVRTEKTSPQAILDLITVGKMIKKV 483
Query: 480 PVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGV 539
PVVVGNCTGFAVNR FFPY+Q + LLVS+G+DVFRID I SFG+P+GPFQL DLAGYGV
Sbjct: 484 PVVVGNCTGFAVNRTFFPYTQGSHLLVSIGIDVFRIDRVISSFGMPMGPFQLQDLAGYGV 543
Query: 540 AAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEE 599
A A + AF R+ S LVDL++++GR GK+NGKG Y YEKG KPKPDPSV +I+E
Sbjct: 544 ALAVKDIYAAAFGTRNLDSNLVDLMVQNGRQGKSNGKGYYLYEKGGKPKPDPSVQVVIDE 603
Query: 600 CRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPS 659
RR + MPGGKP+++++++I+EMI FPVVNE+CRV++E +V+RASDLD AS+LGM FP
Sbjct: 604 YRRCAKTMPGGKPVTLSDQDILEMIFFPVVNEACRVMDENVVIRASDLDIASILGMGFPK 663
Query: 660 YRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSAP-VSSSSTSR 718
+RGG+VFWAD +GA Y+++ L KW+++YG+FFKPS +LE+RA + +PLSAP + ++SR
Sbjct: 664 FRGGLVFWADTIGAPYIHSKLSKWTEIYGDFFKPSSYLEDRAKRSLPLSAPNATQQASSR 723
Query: 719 ARL 721
+R+
Sbjct: 724 SRM 726
>gi|115445513|ref|NP_001046536.1| Os02g0274100 [Oryza sativa Japonica Group]
gi|116257652|sp|Q8W1L6.2|MFP_ORYSJ RecName: Full=Peroxisomal fatty acid beta-oxidation multifunctional
protein; Short=MFP; Includes: RecName: Full=Enoyl-CoA
hydratase/3-2-trans-enoyl-CoA
isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|47848048|dbj|BAD21833.1| Peroxisomal fatty acid beta-oxidation multifunctional protein
[Oryza sativa Japonica Group]
gi|113536067|dbj|BAF08450.1| Os02g0274100 [Oryza sativa Japonica Group]
Length = 726
Score = 1032 bits (2668), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/723 (69%), Positives = 608/723 (84%), Gaps = 4/723 (0%)
Query: 3 APRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFS 62
A RVTMEVG DGVA++T+ NPPVNAL I+ GLK+K+ EA RDDVKAIVLTG GG+F
Sbjct: 4 AIRVTMEVGADGVAVVTICNPPVNALHPIIIQGLKEKYAEAMDRDDVKAIVLTGAGGKFC 63
Query: 63 GGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHA 122
GGFDINVF +VH G+VSLMPDVSVELV NL+E KKP VAA++GLALGGGLEL MGCHA
Sbjct: 64 GGFDINVFTEVHKTGNVSLMPDVSVELVSNLMEAGKKPSVAAIQGLALGGGLELTMGCHA 123
Query: 123 RIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDA 179
RI+ P+ QLGLPELTLG+IPG TQRLPRLVGL KAIEMML SK IT++EG + GL+DA
Sbjct: 124 RISTPEAQLGLPELTLGIIPGFGGTQRLPRLVGLPKAIEMMLQSKFITAKEGKEGGLVDA 183
Query: 180 VVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMP 239
+ + +EL+K+SRLWAL+IA RKPWIRSL RTD+LGSLSEAR VL AR QAKK A N+P
Sbjct: 184 LCSPDELIKMSRLWALEIANYRKPWIRSLARTDRLGSLSEARSVLNSARQQAKKVAANLP 243
Query: 240 QHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIG 299
QHQACLDV+EEG++ GG++GVLKEAKVFKELV+ TS+ LVH FFAQR T+KVP VTD+
Sbjct: 244 QHQACLDVMEEGVLCGGHAGVLKEAKVFKELVLSPTSKALVHAFFAQRLTTKVPGVTDVQ 303
Query: 300 LKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRG 359
LKPR +RKVAVIGGGLMGSGIATA +++N VVLKEVN ++L +G K I AN+ GLV RG
Sbjct: 304 LKPRKIRKVAVIGGGLMGSGIATALLVSNTSVVLKEVNPQFLQRGQKMIAANLEGLVKRG 363
Query: 360 KLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATN 419
LT+DK N A+ +LKG LDYS+FKDVDMVIEAVIE +PLKQ IFS+LEK CPPHCILATN
Sbjct: 364 SLTKDKMNKAMSLLKGALDYSDFKDVDMVIEAVIEKIPLKQSIFSDLEKVCPPHCILATN 423
Query: 420 TSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKV 479
TSTIDLN+VGEKT+SQDRIIGAHFFSPAH+MPLLEIVRTE+TS Q ILDL+TVGK+IKKV
Sbjct: 424 TSTIDLNVVGEKTNSQDRIIGAHFFSPAHIMPLLEIVRTEKTSPQAILDLITVGKMIKKV 483
Query: 480 PVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGV 539
PVVVGNCTGFAVNR FFPY+Q + LLVS+G+DVFRID I SFG+P+GPFQL DLAGYGV
Sbjct: 484 PVVVGNCTGFAVNRTFFPYTQGSHLLVSIGIDVFRIDRVISSFGMPMGPFQLQDLAGYGV 543
Query: 540 AAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEE 599
A A + AF R+ S LVDL++++GR GK+NGKG Y YEKG KPKPDPSV +I+E
Sbjct: 544 ALAVKDIYAAAFGTRNLDSNLVDLMVQNGRQGKSNGKGYYLYEKGGKPKPDPSVQVVIDE 603
Query: 600 CRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPS 659
RR + MPGGKP+++++++I+EMI FPVVNE+CRV++E +V+RASDLD AS+LGM FP
Sbjct: 604 YRRCAKTMPGGKPVTLSDQDILEMIFFPVVNEACRVMDENVVIRASDLDIASILGMGFPK 663
Query: 660 YRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSAP-VSSSSTSR 718
+RGG+VFWAD +GA Y+++ L KW+++YG+FFKPS +LE+RA + +PLSAP + ++SR
Sbjct: 664 FRGGLVFWADTIGAPYIHSKLSKWTEIYGDFFKPSSYLEDRAKRSLPLSAPNATQQASSR 723
Query: 719 ARL 721
+R+
Sbjct: 724 SRM 726
>gi|33338559|gb|AAQ13901.1| multifunctional protein [Oryza sativa]
Length = 718
Score = 1026 bits (2652), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 499/718 (69%), Positives = 604/718 (84%), Gaps = 4/718 (0%)
Query: 8 MEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDI 67
MEVG DGVA++T+ NPPVNAL I+ GLK+K+ EA RDDVKAIVLTG GG+F GGFDI
Sbjct: 1 MEVGADGVAVVTICNPPVNALHPIIIQGLKEKYAEAMDRDDVKAIVLTGAGGKFCGGFDI 60
Query: 68 NVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP 127
NVF +VH G+VSLMPDVSVELV NL+E KKP VAA++GLALGGGLEL MGCHARI+ P
Sbjct: 61 NVFTEVHKTGNVSLMPDVSVELVSNLMEAGKKPSVAAIQGLALGGGLELTMGCHARISTP 120
Query: 128 KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 184
+ QLGLPELTLG+IPG TQRLPRLVGL KAIEMML SK IT++EG + GL+DA+ + +
Sbjct: 121 EAQLGLPELTLGIIPGFGGTQRLPRLVGLPKAIEMMLQSKFITAKEGKERGLVDALCSPD 180
Query: 185 ELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 244
EL+K+SRLWAL+IA RKPWIRSL RTD+LGSLSEAR VL AR QAKK A N+PQHQAC
Sbjct: 181 ELIKMSRLWALEIANYRKPWIRSLARTDRLGSLSEARSVLNSARQQAKKVAANLPQHQAC 240
Query: 245 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRG 304
LDV+EEG++ GG++GVLKEAKVFKELV+ TS+ LVH FFAQR T+KVP VTD+ LKPR
Sbjct: 241 LDVMEEGVLCGGHAGVLKEAKVFKELVLSPTSKALVHAFFAQRLTTKVPGVTDVQLKPRK 300
Query: 305 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 364
+RKVAVIGGGLMGSGIATA +++N VVLKEVN ++L +G K I AN+ GLV RG LT+D
Sbjct: 301 IRKVAVIGGGLMGSGIATALLVSNTSVVLKEVNPQFLQRGQKMIAANLEGLVKRGSLTKD 360
Query: 365 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 424
K N A+ +LKG LDYS+FKDVDMVIEAVIE +PLKQ IFS+LEK CPPHCILATNTSTID
Sbjct: 361 KMNKAMSLLKGALDYSDFKDVDMVIEAVIEKIPLKQSIFSDLEKVCPPHCILATNTSTID 420
Query: 425 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 484
LN+VGEKT+SQDRIIGAHFFSPAH+MPLLEIVRTE+TS Q ILDL+TVGK+IKKVPVVVG
Sbjct: 421 LNVVGEKTNSQDRIIGAHFFSPAHIMPLLEIVRTEKTSPQAILDLITVGKMIKKVPVVVG 480
Query: 485 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATS 544
NCTGFAVNR FFPY+Q + LLVS+G+DVFRID I SFG+P+GPFQL DLAGYGVA A
Sbjct: 481 NCTGFAVNRTFFPYTQGSHLLVSIGIDVFRIDRVISSFGMPMGPFQLQDLAGYGVALAVK 540
Query: 545 KEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLS 604
+ AF R+ S LVDL++++GR GK+NGKG Y YEKG KPKPDPSV +I+E RR +
Sbjct: 541 DIYAAAFGTRNLDSNLVDLMVQNGRQGKSNGKGYYLYEKGGKPKPDPSVQVVIDEYRRCA 600
Query: 605 NIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGI 664
MPGGKP+++++++I+EMI FPVVNE+CRV++E +V+RASDLD AS+LGM FP +RGG+
Sbjct: 601 KTMPGGKPVTLSDQDILEMIFFPVVNEACRVMDENVVIRASDLDIASILGMGFPKFRGGL 660
Query: 665 VFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSAP-VSSSSTSRARL 721
VFWAD +GA Y+++ L KW+++YG+FFKPS +LE+RA + +PLSAP + ++SR+R+
Sbjct: 661 VFWADTIGAPYIHSKLSKWTEIYGDFFKPSSYLEDRAKRSLPLSAPNATQQASSRSRM 718
>gi|226510010|ref|NP_001148087.1| LOC100281695 [Zea mays]
gi|195615714|gb|ACG29687.1| peroxisomal fatty acid beta-oxidation multifunctional protein [Zea
mays]
Length = 727
Score = 1025 bits (2651), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/721 (69%), Positives = 602/721 (83%), Gaps = 4/721 (0%)
Query: 5 RVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGG 64
RVTMEVG DGVA+IT+ NPPVNAL I+AGLKDK+ EA RDDVKAIVLTG GG+F GG
Sbjct: 7 RVTMEVGADGVALITIANPPVNALHPIIIAGLKDKYAEAMRRDDVKAIVLTGAGGKFCGG 66
Query: 65 FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
FDINVF KVH GDVSLMPDVSVELV N++E+ KKP VAA++GLALGGGLEL MGCHARI
Sbjct: 67 FDINVFTKVHQTGDVSLMPDVSVELVSNMMEEGKKPSVAAIQGLALGGGLELTMGCHARI 126
Query: 125 AAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVV 181
+ P+ QLGLPELTLG+IPG TQRLPRLVGL KAIEMML SK I ++EG + GLIDA+
Sbjct: 127 STPEAQLGLPELTLGIIPGFGGTQRLPRLVGLPKAIEMMLQSKFIAAKEGKERGLIDALC 186
Query: 182 TSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 241
+ EL+K SRLWAL+IA RKPW+RSL RTD+L SLSEAR VL AR QA K +PNMPQH
Sbjct: 187 SPNELIKTSRLWALEIANCRKPWMRSLGRTDRLASLSEARAVLNAARQQAMKVSPNMPQH 246
Query: 242 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 301
QACLDV+EEGI++GG +GVLKEA+VFKELV+ TS+ LVHVFFAQR+T+KVP VTD+ LK
Sbjct: 247 QACLDVMEEGILYGGQAGVLKEARVFKELVVAPTSKALVHVFFAQRSTTKVPGVTDVQLK 306
Query: 302 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 361
PR +RKVAVIGGGLMGSGIAT+ +++NI VVLKEVN ++L +G K I N+ GL+ +G L
Sbjct: 307 PRPIRKVAVIGGGLMGSGIATSLLVSNISVVLKEVNPQFLQRGEKMIAGNLEGLIKKGSL 366
Query: 362 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 421
T+D+ + A+ + KG LDYS+FKDVDMVIEAVIE +PLKQ IFS++EK CP HCILATNTS
Sbjct: 367 TKDRMHKAMSLFKGALDYSDFKDVDMVIEAVIEKIPLKQSIFSDIEKICPKHCILATNTS 426
Query: 422 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 481
TIDLN+VGEKT+SQDRIIGAHFFSPAH+MPLLEIVRTE+TS Q ILDL+TVGKIIKKVPV
Sbjct: 427 TIDLNVVGEKTNSQDRIIGAHFFSPAHIMPLLEIVRTEKTSPQAILDLITVGKIIKKVPV 486
Query: 482 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAA 541
VVGNCTGFAVNR FFPY+Q++ LLVSLG+DVFRID I SFG+P+GPFQL D+AGYGVA
Sbjct: 487 VVGNCTGFAVNRTFFPYTQASHLLVSLGIDVFRIDRVISSFGMPMGPFQLQDVAGYGVAL 546
Query: 542 ATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECR 601
A + AF +R+ S LV L++K GR GK N KG Y YEKG+KPKPDPSV +IEE R
Sbjct: 547 AVKDIYADAFGERNLGSNLVGLMVKDGRQGKVNAKGYYIYEKGAKPKPDPSVKHVIEEYR 606
Query: 602 RLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYR 661
+ +N MPGGKP+++ +++I+EMI FPVVNE+CRV++E +V+RASDLD ASVLGM FP YR
Sbjct: 607 KQANTMPGGKPVTLMDQDILEMIFFPVVNEACRVMDENVVIRASDLDIASVLGMGFPKYR 666
Query: 662 GGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSAP-VSSSSTSRAR 720
GG+VFWAD VGA Y+++ L KW+++YG FFKPS +LE+RA G+PLSAP S ++R+R
Sbjct: 667 GGLVFWADTVGAPYIHSKLSKWAEMYGPFFKPSSYLEQRAKSGVPLSAPGTSQQGSARSR 726
Query: 721 L 721
+
Sbjct: 727 M 727
>gi|17105223|gb|AAL35606.1|AF442962_1 peroxisomal multifunctional protein [Oryza sativa]
Length = 725
Score = 1019 bits (2636), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 499/723 (69%), Positives = 605/723 (83%), Gaps = 5/723 (0%)
Query: 3 APRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFS 62
A RVTMEVG DGVA++T+ NPPVNAL I+ GLK+K+ EA RDDVKAIVLTG GG+F
Sbjct: 4 AIRVTMEVGADGVAVVTICNPPVNALHPIIIQGLKEKYAEAMDRDDVKAIVLTGAGGKFC 63
Query: 63 GGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHA 122
GGFDINVF +VH G+VSLMPDVSVELV NL+E KKP VAA++GLALGGGLEL MGCHA
Sbjct: 64 GGFDINVFTEVHKTGNVSLMPDVSVELVSNLMEAGKKPSVAAIQGLALGGGLELTMGCHA 123
Query: 123 RIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDA 179
RI+ P+ QLGLPELTLG+IPG TQRLPRLVGL KAIEMML SK IT++EG + GL+DA
Sbjct: 124 RISTPEAQLGLPELTLGIIPGFGGTQRLPRLVGLPKAIEMMLQSKFITAKEGKEGGLVDA 183
Query: 180 VVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMP 239
+ + +EL+K+SRLWAL+IA RKPWIRSL RTD+LGSLSEAR VL AR QAKK A N+P
Sbjct: 184 LCSPDELIKMSRLWALEIANYRKPWIRSLARTDRLGSLSEARSVLNSARQQAKKVAANLP 243
Query: 240 QHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIG 299
QHQACLDV+EEG++ GG++GVLKEAKVFKELV+ TS+ LVH FFAQR T+KVP VTD+
Sbjct: 244 QHQACLDVMEEGVLCGGHAGVLKEAKVFKELVLSPTSKALVHAFFAQRLTTKVPGVTDVQ 303
Query: 300 LKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRG 359
LKPR +RKVAVIGGGLMGSGIATA +++N VVLKEVN ++ +G K I AN+ GLV RG
Sbjct: 304 LKPRKIRKVAVIGGGLMGSGIATALLVSNTSVVLKEVNPQFRQRGQKMIAANLEGLVKRG 363
Query: 360 KLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATN 419
LT+DK N A+ +LKG LDY +FKDVDMVIEAVIE +PLKQ IFS+LEK CPPHCILATN
Sbjct: 364 SLTKDKMNKAMSLLKGALDYCDFKDVDMVIEAVIEKIPLKQSIFSDLEKVCPPHCILATN 423
Query: 420 TSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKV 479
TSTIDLN+VGEKT+SQDRIIGAHFFSPAH+MPLLEIVRTE+TS Q ILDL+TVGK+IKKV
Sbjct: 424 TSTIDLNVVGEKTNSQDRIIGAHFFSPAHIMPLLEIVRTEKTSPQAILDLITVGKMIKKV 483
Query: 480 PVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGV 539
PVVVGNCTGFAVNR FFPY+Q + LLVS+G+DVFRID I SFG+P+GPFQL DLAGYGV
Sbjct: 484 PVVVGNCTGFAVNRTFFPYTQGSHLLVSIGIDVFRIDRVISSFGMPMGPFQLQDLAGYGV 543
Query: 540 AAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEE 599
+ + AF R+ S LVDL++++GR GK+NGKG Y YEKG KPKPDPSV +I+E
Sbjct: 544 HCSKG-FYAAAFGTRNLDSNLVDLMVQNGRQGKSNGKGYYLYEKGGKPKPDPSVQVVIDE 602
Query: 600 CRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPS 659
RR + MPGGKP+++++++I+EMI FPVVNE+CRV++E +V+RASDLD AS+LGM FP
Sbjct: 603 YRRCAKTMPGGKPVTLSDQDILEMIFFPVVNEACRVMDENVVIRASDLDIASILGMGFPK 662
Query: 660 YRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSAP-VSSSSTSR 718
+RGG+VFWAD +GA Y+++ L KW+++YG+FFKPS +LE+RA + +PLSAP + ++SR
Sbjct: 663 FRGGLVFWADTIGAPYIHSKLSKWTEIYGDFFKPSSYLEDRAKRSLPLSAPNATQQASSR 722
Query: 719 ARL 721
+R+
Sbjct: 723 SRM 725
>gi|357141979|ref|XP_003572416.1| PREDICTED: peroxisomal fatty acid beta-oxidation multifunctional
protein-like [Brachypodium distachyon]
Length = 726
Score = 1016 bits (2627), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 498/709 (70%), Positives = 593/709 (83%), Gaps = 3/709 (0%)
Query: 5 RVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGG 64
RVTMEVG DGVA+IT+ NPPVNAL I+ GLK+K+ EA RDDVKAIVLTG G+F GG
Sbjct: 6 RVTMEVGADGVALITICNPPVNALHPIIIQGLKEKYAEAMDRDDVKAIVLTGAAGKFCGG 65
Query: 65 FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
FDINVF KVH GDV+LMPDVSVELV N++E+ KKP VAA++GLALGGGLEL MGCHARI
Sbjct: 66 FDINVFTKVHETGDVTLMPDVSVELVSNMMEEGKKPSVAAIQGLALGGGLELTMGCHARI 125
Query: 125 AAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVV 181
+ P+ QLGLPELTLGVIPG TQRLPRLVGL KAIEMML SK IT++EG + G +DA+
Sbjct: 126 STPEAQLGLPELTLGVIPGFGGTQRLPRLVGLPKAIEMMLQSKFITAKEGKERGFVDALC 185
Query: 182 TSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 241
+ +EL+K+SR WAL+IA RKPWIRSL RTD+LGSLSEAR VL +AR QAKK A NMPQH
Sbjct: 186 SPDELIKLSRFWALEIANCRKPWIRSLGRTDRLGSLSEARAVLNMAREQAKKVALNMPQH 245
Query: 242 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 301
QACLDVIEEG+V GG++GV+KEAKVFKELV+ TS+ LVHVFFAQR+T+KVP VTDI +K
Sbjct: 246 QACLDVIEEGVVFGGHAGVVKEAKVFKELVLSTTSKALVHVFFAQRSTTKVPGVTDIQIK 305
Query: 302 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 361
PR ++KVAVIGGGLMGSGIATA ++ NI VVLKEVN ++L +G TI N+ GLV RG L
Sbjct: 306 PRQIKKVAVIGGGLMGSGIATALLVGNISVVLKEVNPQFLKRGQNTIAGNLEGLVKRGSL 365
Query: 362 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 421
T+DK N A+ +LKG LDYS+FKDVDMVIEAVIE +PLKQ IF+++EK CPPHCILATNTS
Sbjct: 366 TKDKMNKAISLLKGALDYSDFKDVDMVIEAVIEKIPLKQSIFADIEKICPPHCILATNTS 425
Query: 422 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 481
TIDLN+VGEKT SQDRIIGAHFFSPAH+MPLLEIVRTE+TS Q ILDL+TVGKIIKKVPV
Sbjct: 426 TIDLNVVGEKTKSQDRIIGAHFFSPAHIMPLLEIVRTEKTSPQAILDLITVGKIIKKVPV 485
Query: 482 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAA 541
VVGNCTGFAVNR FFPY+Q ++LLVSLG+D+FRID I SFG+P+GPFQL D+AGYGVA
Sbjct: 486 VVGNCTGFAVNRTFFPYTQGSQLLVSLGIDLFRIDRVISSFGMPLGPFQLQDVAGYGVAL 545
Query: 542 ATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECR 601
A + AF R+F S LV L+ + GR GK NGKG Y YEKG KPKPDPSV +I+E R
Sbjct: 546 AVKDIYAAAFGTRNFDSDLVVLMAEDGRQGKINGKGYYLYEKGGKPKPDPSVQHVIDEYR 605
Query: 602 RLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYR 661
+ + MP GKP+++++++I+EM+ FPVVNE+CRV++E +V+RASDLD ASVLGM FP YR
Sbjct: 606 KRAKTMPDGKPVTLSDQDILEMVFFPVVNEACRVMDENVVIRASDLDIASVLGMGFPKYR 665
Query: 662 GGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSAP 710
GG++FWAD VGA+Y+Y+ L KW++LYG+FFKPS +LE+RA G L AP
Sbjct: 666 GGLIFWADTVGASYIYSKLTKWAELYGDFFKPSLYLEDRAKSGRLLGAP 714
>gi|148910098|gb|ABR18131.1| unknown [Picea sitchensis]
Length = 723
Score = 967 bits (2499), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 472/718 (65%), Positives = 586/718 (81%), Gaps = 3/718 (0%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR 60
M V+MEVG DGVAII + NPPVNALA+ ++AGLK+K++EA R+DVKAIV+TGNGG+
Sbjct: 1 MVKVDVSMEVGADGVAIIKMTNPPVNALAVTVLAGLKEKYDEAMRRNDVKAIVVTGNGGK 60
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
FSGGFDINV Q+V G++S + VSV+L++N IED KKP VAA++GLALGGGLELAM C
Sbjct: 61 FSGGFDINVIQEVQQTGNLSHLGRVSVDLMINTIEDAKKPSVAAIQGLALGGGLELAMSC 120
Query: 121 HARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 177
HARI+ PK LGLPEL LG+ PG TQRLPRLVGL KA+EMMLLSKSI SEEG KLGLI
Sbjct: 121 HARISTPKALLGLPELQLGIFPGFGGTQRLPRLVGLQKAVEMMLLSKSIMSEEGNKLGLI 180
Query: 178 DAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 237
DAVV+ EL+ +R+WALDIA RR+PWI SL RTDKL SL EARE+LK AR QAKKTAPN
Sbjct: 181 DAVVSPGELMTTARMWALDIAERRRPWIISLKRTDKLESLGEAREILKFARAQAKKTAPN 240
Query: 238 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 297
+P Q CLDVIEEGIV GG +GVLKE K F ++V+ DT++GLVH FF+QRAT+KVP VTD
Sbjct: 241 LPHPQLCLDVIEEGIVAGGLAGVLKEEKGFNDIVISDTAKGLVHFFFSQRATTKVPGVTD 300
Query: 298 IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 357
+GLKPR ++KVAV+GGGLMGSGIAT+ +L+NI VVLKEVN+ +L +GI I AN++ V
Sbjct: 301 LGLKPRQIKKVAVLGGGLMGSGIATSLVLSNIPVVLKEVNAGFLQQGINRISANLKSRVK 360
Query: 358 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 417
+G +T++K + ++ GV+DY+EF++VDMVIEAV+E + LKQ+IFS+LEK CP HCILA
Sbjct: 361 KGSMTEEKFEKTMSLITGVVDYAEFRNVDMVIEAVLEKISLKQEIFSDLEKICPAHCILA 420
Query: 418 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 477
TNTSTIDLN++G KT QDRIIGAHFFSPAHVMPLLEIVRTE+TS Q+I+DL+ VGK IK
Sbjct: 421 TNTSTIDLNLIGAKTHVQDRIIGAHFFSPAHVMPLLEIVRTEKTSPQIIIDLINVGKNIK 480
Query: 478 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGY 537
KVPVVVGNCTGFAVNR FFPY+Q+A +L +LGVD++RID I SFG+P+GPF+L DL GY
Sbjct: 481 KVPVVVGNCTGFAVNRMFFPYTQAAHMLANLGVDIYRIDKVITSFGMPMGPFRLQDLVGY 540
Query: 538 GVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPII 597
GV+ K+F AF DR+F SPL L++++ R G+ NGKG Y Y++ + +P P V II
Sbjct: 541 GVSLEVGKQFVTAFADRTFTSPLTQLMIENKRAGEKNGKGYYVYDEKRRARPAPEVKEII 600
Query: 598 EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSF 657
E+ +++ IMPGGK + VT++EI+EMI FPVVNE+CRVL+EGI +ASDLD + VLGM F
Sbjct: 601 EQSIKITKIMPGGKAVVVTDREILEMIFFPVVNEACRVLDEGIASKASDLDVSVVLGMGF 660
Query: 658 PSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSAPVSSSS 715
PSYRGGIVFWAD+VGA ++Y+SLKKW + YG FKP +LEERA +GIPLSAPV++ +
Sbjct: 661 PSYRGGIVFWADSVGAGHIYSSLKKWYESYGGLFKPCAYLEERAARGIPLSAPVAAKN 718
>gi|326506022|dbj|BAJ91250.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 692
Score = 964 bits (2491), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/674 (69%), Positives = 567/674 (84%), Gaps = 4/674 (0%)
Query: 52 IVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALG 111
+ G G+F GGFDINVF KVH GDVS +PD+S ELV N++ED KKP VAA++GLALG
Sbjct: 19 LYFIGAVGKFCGGFDINVFSKVHDTGDVSHLPDMSFELVSNMMEDGKKPSVAAIQGLALG 78
Query: 112 GGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITS 168
GGLEL MGCHARIA P+ QLGLPELTLGVIPG TQRLPRLVGL KAIEMML SK IT+
Sbjct: 79 GGLELTMGCHARIATPEAQLGLPELTLGVIPGAGGTQRLPRLVGLPKAIEMMLQSKFITA 138
Query: 169 EEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLAR 228
+EG + GLIDA+ + +EL+K+SR WAL+IA RKPWIRSL RTD+LGSLSEAR VL +AR
Sbjct: 139 KEGKERGLIDALCSPDELIKMSRFWALEIANHRKPWIRSLGRTDRLGSLSEARAVLSMAR 198
Query: 229 LQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRA 288
QA K A NMPQHQACLDVIEEG+++GG++GV+KEAKVFKELV+ TSR LVHVFFAQR+
Sbjct: 199 QQANKAAANMPQHQACLDVIEEGVLYGGHAGVVKEAKVFKELVVSTTSRALVHVFFAQRS 258
Query: 289 TSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTI 348
T+KVP VTDI LKPR +RKVAVIGGGLMGSGIATA ++ NI VVLKEVN ++L +G KTI
Sbjct: 259 TTKVPGVTDIQLKPRNIRKVAVIGGGLMGSGIATALLVGNISVVLKEVNPQFLQRGQKTI 318
Query: 349 EANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEK 408
N+ GLV RG LT+DK + A+ +LKG LDYS+FKDVDMVIEAVIE VPLKQ IF+++EK
Sbjct: 319 AGNLEGLVKRGSLTKDKMSKAISLLKGALDYSDFKDVDMVIEAVIEKVPLKQSIFADIEK 378
Query: 409 ACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILD 468
CPPHCILATNTSTIDLN+VGEKT+SQDRIIGAHFFSPAH+MPLLEIVRTE+TS Q ILD
Sbjct: 379 ICPPHCILATNTSTIDLNVVGEKTNSQDRIIGAHFFSPAHIMPLLEIVRTEKTSPQAILD 438
Query: 469 LMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGP 528
L+TVGKIIKKVPVVVGNCTGFAVNR FFPY+Q A+LLVSLG+D+FRID I +FG+P+GP
Sbjct: 439 LITVGKIIKKVPVVVGNCTGFAVNRTFFPYTQGAQLLVSLGIDLFRIDRIISNFGMPMGP 498
Query: 529 FQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK 588
FQL DLAGYGVA A + AF R+F S LVDL+ ++GR GK+NGKG Y YEKG++PK
Sbjct: 499 FQLQDLAGYGVALAVKDIYAAAFGTRNFDSVLVDLMAETGRQGKSNGKGYYLYEKGARPK 558
Query: 589 PDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLD 648
PDPSV +I+E RR + MPGGKP+++++++I+EM+ FPVVNE+CRV++E +V+RA+DLD
Sbjct: 559 PDPSVQNVIDEYRRQAKTMPGGKPVTLSDQDILEMVFFPVVNEACRVMDENVVIRAADLD 618
Query: 649 DASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLS 708
ASVLGM FP YRGG++FWAD VGA+Y+++ L KW+++YG+FFKPS +LEERA G PL+
Sbjct: 619 IASVLGMGFPKYRGGLIFWADTVGASYIHSKLSKWAEMYGDFFKPSLYLEERAKSGRPLA 678
Query: 709 APVSSSSTS-RARL 721
AP ++ S R+R+
Sbjct: 679 APRTAHQVSTRSRM 692
>gi|116787358|gb|ABK24476.1| unknown [Picea sitchensis]
Length = 726
Score = 905 bits (2338), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/716 (61%), Positives = 561/716 (78%), Gaps = 8/716 (1%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
V +EVG+DGVA+IT+ NPPVN+L++ ++ GLK+K++EA RDDVKAIV+TG+GG+F GGF
Sbjct: 6 VDIEVGSDGVALITITNPPVNSLSVDVLLGLKEKYDEALQRDDVKAIVITGSGGKFCGGF 65
Query: 66 DINVFQKV-HGA----GDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
DI + HGA G+ + DVSV+++ L E KKP VAA++GLALGGGLE+AM C
Sbjct: 66 DIGTLGGLQHGAVKIGGEQFELTDVSVKIITELFEGAKKPSVAAIDGLALGGGLEIAMAC 125
Query: 121 HARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 177
H RIAAP+ QLGLPEL LGVIPG TQRLPRLVGLSKA+EM+LLSK I SEE +LGL+
Sbjct: 126 HGRIAAPQAQLGLPELQLGVIPGFGGTQRLPRLVGLSKALEMILLSKPIKSEEASELGLV 185
Query: 178 DAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 237
DAVV ELL +R WALDIA R+PWIRSL+RTDKL L EARE+LK AR+QA+K A N
Sbjct: 186 DAVVPPLELLNSARRWALDIAEFRRPWIRSLYRTDKLEPLGEAREILKFARIQAQKRAAN 245
Query: 238 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 297
+ CLDVIEEGIV G +G++KE F++L+ D ++ L+HVFF+QR TSKVP VTD
Sbjct: 246 LKHPLVCLDVIEEGIVSGPMAGLVKEVSSFQQLLHSDNAKALIHVFFSQRLTSKVPGVTD 305
Query: 298 IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 357
+GLKPR VRKVAV+GGGLMGSGIATA IL+ V+LKEVN +L G++ I+AN++ V
Sbjct: 306 VGLKPRRVRKVAVLGGGLMGSGIATALILSGYPVILKEVNDRFLQAGLERIKANLQSRVN 365
Query: 358 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 417
+GK++Q+K ++ G +DY F++VD+VIEAVIE+V LKQ+IFS+LEK CPPHC+LA
Sbjct: 366 KGKMSQEKFEKIFSLVHGTVDYENFRNVDIVIEAVIENVALKQQIFSDLEKFCPPHCVLA 425
Query: 418 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 477
TNTSTIDL+++G+KT+SQDRI+GAHFFSPAH+MPLLEIVRTE+TS QVI+DLM VGK IK
Sbjct: 426 TNTSTIDLSLIGQKTNSQDRIVGAHFFSPAHIMPLLEIVRTEKTSPQVIVDLMDVGKKIK 485
Query: 478 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGY 537
K P+VVGNCTGFAVNR FFPY+QSA L LG+DV+RID I SFG+P+GPF+L DL G+
Sbjct: 486 KTPIVVGNCTGFAVNRMFFPYTQSALFLTDLGLDVYRIDIVITSFGMPMGPFRLADLVGF 545
Query: 538 GVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPII 597
VA AT ++ + FP+R ++S L+ ++L+ R G+ KG Y Y+ K +PDP + I
Sbjct: 546 EVAVATGMQYLENFPERVYKSLLIPIMLEDKRAGEKTRKGFYLYDDRRKARPDPEIKKYI 605
Query: 598 EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSF 657
E+ R ++ ++ GKP+S+ +K+IVEM+ FPVVNE+CRVL EGI V+ASDLD ASV+GM F
Sbjct: 606 EKSRSMAGLIADGKPLSLMDKDIVEMVFFPVVNEACRVLGEGITVQASDLDIASVMGMGF 665
Query: 658 PSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSAPVSS 713
P YRGG++FWAD++G+NY+Y+ LK W++ YG+FFKP FLEERA G LSAPV S
Sbjct: 666 PPYRGGVMFWADSLGSNYIYSKLKIWAESYGDFFKPCPFLEERAATGSKLSAPVKS 721
>gi|302792475|ref|XP_002978003.1| hypothetical protein SELMODRAFT_176660 [Selaginella moellendorffii]
gi|300154024|gb|EFJ20660.1| hypothetical protein SELMODRAFT_176660 [Selaginella moellendorffii]
Length = 721
Score = 895 bits (2312), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/719 (62%), Positives = 573/719 (79%), Gaps = 3/719 (0%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR 60
MA P V++EVG D VA+ITL NPPVNALA+P++ GLK+K+EEA SR+DVKAIV+TG G+
Sbjct: 1 MARPGVSLEVGADKVAVITLRNPPVNALAMPVLWGLKEKYEEACSREDVKAIVVTGANGK 60
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
FSGGFDI+ Q V +G++S + +SV+L+ LIE+ KP VAA++GLALGGGLELAM C
Sbjct: 61 FSGGFDISTIQDVQASGNMSALGRISVDLMTKLIEEAGKPSVAAIQGLALGGGLELAMCC 120
Query: 121 HARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 177
HAR+AAPK QLGLPEL LG+IPG TQRLPRLVGL+KAIEMMLLSK +TSEEG +LGL+
Sbjct: 121 HARVAAPKAQLGLPELQLGIIPGFGGTQRLPRLVGLTKAIEMMLLSKPVTSEEGKELGLV 180
Query: 178 DAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 237
D +V +E +L +R A+DIA R+PW +LH+TDKL L EARE+LK AR QA KTAP
Sbjct: 181 DELVPAEAVLTTARKVAVDIAEGRRPWCITLHKTDKLEPLGEAREILKFARAQAMKTAPK 240
Query: 238 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 297
+ CLD IEEGIV GG++G+LKE K F+E + D S+ L H+FFAQR+TSKVP VTD
Sbjct: 241 LTHPHVCLDAIEEGIVKGGFAGLLKEEKAFQEALFSDASKSLTHIFFAQRSTSKVPGVTD 300
Query: 298 IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 357
+GLKP+ V+KVAVIGGG MGSGI TA IL+NI VVLKEVNS++L +G+ ++ N++ V
Sbjct: 301 VGLKPKVVKKVAVIGGGFMGSGIVTALILSNIKVVLKEVNSDFLQQGLNRVKGNLQSRVK 360
Query: 358 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 417
+GKL++DK A+ +++GVLDY +F VD+VIEAV+E+V LKQ+IF++LEK C P C+LA
Sbjct: 361 KGKLSKDKFERAISLVEGVLDYEQFGSVDVVIEAVVENVGLKQQIFADLEKFCSPSCVLA 420
Query: 418 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 477
+NTSTIDLN+VG KT +QDRIIGAHFFSPAHVMPLLE+VRTE+TS QVILDLMT+GK IK
Sbjct: 421 SNTSTIDLNVVGSKTKAQDRIIGAHFFSPAHVMPLLEVVRTEKTSPQVILDLMTLGKTIK 480
Query: 478 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGY 537
K+PVVVGNCTGFAVNR FFPY+Q+A +L+ LGVD +RID AI FG+P+GPF+L D G+
Sbjct: 481 KIPVVVGNCTGFAVNRVFFPYTQAATMLLDLGVDPYRIDRAITGFGMPMGPFRLADFVGF 540
Query: 538 GVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPII 597
GVA A +++ +FP+R + S + L+ R G+ N KG Y Y++ KP+P P + +
Sbjct: 541 GVAVAVGQQYLNSFPERVYVSQIFPLMFSDKRLGEGNRKGFYLYDEKRKPRPAPELQGYV 600
Query: 598 EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSF 657
++ R+L+ +MPGGKPI++T+KEIVEMILFPVVNE+CRVLEEG+VV+ASDLD A+VLGM F
Sbjct: 601 DKSRQLAKLMPGGKPINITDKEIVEMILFPVVNEACRVLEEGVVVKASDLDIATVLGMGF 660
Query: 658 PSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSAPVSSSST 716
P Y+GG+VFWAD +GA Y+ + LK+WS+ YG FF+PS FL+ RA++G LS PV S +
Sbjct: 661 PPYKGGLVFWADMIGAGYIASKLKEWSETYGKFFQPSPFLQARASQGGKLSDPVKSGKS 719
>gi|302766649|ref|XP_002966745.1| hypothetical protein SELMODRAFT_168461 [Selaginella moellendorffii]
gi|300166165|gb|EFJ32772.1| hypothetical protein SELMODRAFT_168461 [Selaginella moellendorffii]
Length = 721
Score = 894 bits (2310), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/719 (61%), Positives = 573/719 (79%), Gaps = 3/719 (0%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR 60
MA P V++EVG D VA+ITL NPPVNALA+P++ GLK+K+EEA SR+DVKAIV+TG G+
Sbjct: 1 MARPGVSLEVGADKVAVITLRNPPVNALAMPVLWGLKEKYEEACSREDVKAIVVTGANGK 60
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
FSGGFDI+ Q V +G++S + +SV+L+ LIE+ KP VAA++GLALGGGLELAM C
Sbjct: 61 FSGGFDISTIQDVQASGNMSALGRISVDLMTKLIEEAGKPSVAAIQGLALGGGLELAMCC 120
Query: 121 HARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 177
HAR+AAPK QLGLPEL LG+IPG TQRLPRLVGL+KAIEMMLLSK +TSEEG +LGL+
Sbjct: 121 HARVAAPKAQLGLPELQLGIIPGFGGTQRLPRLVGLTKAIEMMLLSKPVTSEEGKELGLV 180
Query: 178 DAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 237
D +V +E +L +R A+DIA R+PW +LH+TDKL L EARE+LK AR QA KTAP
Sbjct: 181 DELVPAEAVLTTARKVAVDIAEGRRPWCITLHKTDKLEPLGEAREILKFARAQAMKTAPK 240
Query: 238 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 297
+ CLD IEEGIV GG++G+LKE K F+E + D S+ L H+FFAQR+TSKVP VTD
Sbjct: 241 LTHPHVCLDAIEEGIVKGGFAGLLKEEKAFQEALFSDASKSLTHIFFAQRSTSKVPGVTD 300
Query: 298 IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 357
+GLKP+ V+KVAVIGGG MGSGI TA IL+NI VVLKEVNS++L +G+ ++ N++ V
Sbjct: 301 VGLKPKVVKKVAVIGGGFMGSGIVTALILSNIKVVLKEVNSDFLQQGLNRVKGNLQSRVK 360
Query: 358 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 417
+GKL++DK A+ +++GVLDY +F VD+VIEAV+E+V LKQ+IF++LEK C P C+LA
Sbjct: 361 KGKLSKDKFERAISLVEGVLDYEQFGSVDVVIEAVVENVGLKQQIFADLEKFCSPSCVLA 420
Query: 418 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 477
+NTSTIDLN+VG KT +QDRIIGAHFFSPAHVMPLLE+VRTE+TS QVILDLMT+GK IK
Sbjct: 421 SNTSTIDLNVVGSKTKAQDRIIGAHFFSPAHVMPLLEVVRTEKTSPQVILDLMTLGKTIK 480
Query: 478 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGY 537
K+PVVVGNCTGFAVNR FFPY+Q+A +L+ LG+D +RID AI FG+P+GPF+L D G+
Sbjct: 481 KIPVVVGNCTGFAVNRVFFPYTQAATMLLDLGIDPYRIDRAITGFGMPMGPFRLADFVGF 540
Query: 538 GVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPII 597
GVA A +++ +FP+R + S + L+ R G+ N KG Y Y++ KP+P P + +
Sbjct: 541 GVAVAVGQQYLNSFPERVYVSQIFPLMFSDKRLGEGNRKGFYLYDEKRKPRPAPELQGYV 600
Query: 598 EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSF 657
++ R+L+ +MPGGKPI++T+KEIVEMILFPVVNE+CRVLEEG+VV+ASDLD A+VLGM F
Sbjct: 601 DKSRQLAKLMPGGKPINITDKEIVEMILFPVVNEACRVLEEGVVVKASDLDIATVLGMGF 660
Query: 658 PSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSAPVSSSST 716
P Y+GG+VFWAD +GA Y+ + LK+WS+ YG FF+PS FL+ RA++G LS PV S +
Sbjct: 661 PPYKGGLVFWADMIGAGYIASKLKEWSETYGKFFQPSPFLQARASQGGKLSDPVKSGKS 719
>gi|449522795|ref|XP_004168411.1| PREDICTED: glyoxysomal fatty acid beta-oxidation multifunctional
protein MFP-a-like isoform 2 [Cucumis sativus]
gi|34922495|sp|Q39659.1|MFPA_CUCSA RecName: Full=Glyoxysomal fatty acid beta-oxidation multifunctional
protein MFP-a; Includes: RecName: Full=Enoyl-CoA
hydratase/3-2-trans-enoyl-CoA
isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|551428|emb|CAA55630.1| tetrafunctional protein [Cucumis sativus]
Length = 725
Score = 887 bits (2293), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/713 (59%), Positives = 548/713 (76%), Gaps = 4/713 (0%)
Query: 2 AAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRF 61
A R MEVG DGVAIIT+INPPVN+L+ ++ L+D +E+A RDDVKAIV+TG G+F
Sbjct: 5 AKGRTVMEVGTDGVAIITIINPPVNSLSFDVLFSLRDSYEQALRRDDVKAIVVTGAKGKF 64
Query: 62 SGGFDINVFQKVHGA-GDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
SGGFDI F + G G+ + ++S+E++ ++ E +KP VAA++GLALGGGLE+AM C
Sbjct: 65 SGGFDITAFGVLQGGKGEQPNVRNISIEMITDIFEAARKPAVAAIDGLALGGGLEVAMAC 124
Query: 121 HARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 177
HARI+ P QLGLPEL LG+IPG TQRLPRLVGLSKA+EMML SK I +E LGL+
Sbjct: 125 HARISTPTAQLGLPELQLGIIPGFGGTQRLPRLVGLSKALEMMLTSKPIKGQEAHSLGLV 184
Query: 178 DAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 237
DA+V EEL+ +R WAL+I RR+PW+ SLHRTDKL SL+EAR++ LAR QAKK PN
Sbjct: 185 DAIVPPEELINTARRWALEILERRRPWVHSLHRTDKLESLAEARKIFNLARAQAKKQYPN 244
Query: 238 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 297
+ AC+D +E G+V G +G+ KEA+ F+ L+ DT + L+H+FFAQR+T+KVP VTD
Sbjct: 245 LKHTIACIDAVETGVVSGPRAGLWKEAEEFQGLLHSDTCKSLIHIFFAQRSTTKVPGVTD 304
Query: 298 IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 357
+GL PR ++KVA++GGGLMGSGIATA IL+N +VVLKEVN ++L GI + AN++ V
Sbjct: 305 LGLVPRQIKKVAIVGGGLMGSGIATALILSNYHVVLKEVNDKFLQAGIDRVRANLQSRVK 364
Query: 358 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 417
+G +T +K ++ +LKGVL+Y FKDVDMVIEAVIE+V LKQ+IFS+LEK CPPHC+LA
Sbjct: 365 KGNMTNEKFEKSISLLKGVLNYESFKDVDMVIEAVIENVSLKQQIFSDLEKYCPPHCMLA 424
Query: 418 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 477
TNTSTIDL ++GE+ S+DRIIGAHFFSPAH+MPLLEIVRT+ T+AQVI+DL+ VGK IK
Sbjct: 425 TNTSTIDLELIGERIKSRDRIIGAHFFSPAHIMPLLEIVRTKHTAAQVIVDLLDVGKNIK 484
Query: 478 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGY 537
K PVVVGNCTGFAVNR FFPYSQ+A LL GVD ++ID AI FG+P+GPF+L DL G+
Sbjct: 485 KTPVVVGNCTGFAVNRMFFPYSQAAILLAEHGVDPYQIDRAISKFGMPMGPFRLCDLVGF 544
Query: 538 GVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPII 597
GVAAAT+ +F +AFP+R+++S L+ L+ + G++ KG Y Y+K K P+P + I
Sbjct: 545 GVAAATASQFVQAFPERTYKSMLIPLMQEDKNAGESTRKGFYVYDKNRKAGPNPELKKYI 604
Query: 598 EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSF 657
E+ R S + K + EK+IVEMI FPVVNE+CRVL EGI V+A+DLD A V+GM F
Sbjct: 605 EKARNSSGVSVDPKLTKLPEKDIVEMIFFPVVNEACRVLAEGIAVKAADLDIAGVMGMGF 664
Query: 658 PSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSAP 710
PSYRGG++FWAD++G+NY+Y+ L++WS+ YG FFKP +L ERA +G LSAP
Sbjct: 665 PSYRGGLMFWADSLGSNYIYSRLEEWSKQYGGFFKPCGYLAERAVQGATLSAP 717
>gi|225431755|ref|XP_002270067.1| PREDICTED: glyoxysomal fatty acid beta-oxidation multifunctional
protein MFP-a [Vitis vinifera]
Length = 724
Score = 884 bits (2283), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/713 (59%), Positives = 542/713 (76%), Gaps = 3/713 (0%)
Query: 5 RVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGG 64
R MEVG DGVA+ITLINPPVN+L+ ++ LK+ +EEA RDDVKAIV+TG G+FSGG
Sbjct: 8 RTVMEVGADGVALITLINPPVNSLSFDVLNSLKESYEEALRRDDVKAIVITGAKGKFSGG 67
Query: 65 FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
FDI F + G+VS VSVE++ + +E +KP VAA++GLALGGGLE+AMGCHARI
Sbjct: 68 FDITAFGGIQAGGEVSKPGFVSVEILTDTVEAARKPSVAAIDGLALGGGLEVAMGCHARI 127
Query: 125 AAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVV 181
+ P QLGLPEL LG+IPG TQRLPRLVGLSKA+EMML+SK + + LGL+DAVV
Sbjct: 128 STPNAQLGLPELQLGIIPGFGGTQRLPRLVGLSKALEMMLMSKPVKGVDAHSLGLVDAVV 187
Query: 182 TSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 241
++L+K +R WALDI R+PW+ SL++TDKL L EARE+LK AR QA+K APN+
Sbjct: 188 APDQLVKTARQWALDILECRRPWVHSLYKTDKLEPLGEAREILKFARTQAQKQAPNLKHP 247
Query: 242 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 301
C+DVIE GIV G +G+ KEA+ F+EL+ D + LVH+FFAQR TSKVP + D+GL
Sbjct: 248 LLCIDVIEAGIVSGPVAGLWKEAEAFQELLHSDICKSLVHIFFAQRGTSKVPGIADLGLV 307
Query: 302 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 361
PR + KVA++GGGLMGSGIATA +L+N V+LKEVN ++L GI + AN++ V +G +
Sbjct: 308 PRRINKVAILGGGLMGSGIATALMLSNYPVILKEVNEKFLQAGIGRVRANLQSRVKKGAM 367
Query: 362 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 421
TQ+K +LKGVLDY FKDVDMVIEAVIE+V LKQ+IF++LEK CPPHCILA+NTS
Sbjct: 368 TQEKFEKTFSLLKGVLDYESFKDVDMVIEAVIENVSLKQQIFADLEKFCPPHCILASNTS 427
Query: 422 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 481
TIDLN++GEKT S DRI+GAHFFSPAHVMPLLEIVRT+RTS QVI+DL+ +GK IKK PV
Sbjct: 428 TIDLNLIGEKTRSHDRIVGAHFFSPAHVMPLLEIVRTQRTSPQVIVDLLDIGKKIKKTPV 487
Query: 482 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAA 541
VVGNCTGFAVNR F PY+Q+A LLV G DV++ID AI FG+P+GPF+L+DL G+GVA
Sbjct: 488 VVGNCTGFAVNRMFSPYTQAALLLVEHGADVYQIDRAITKFGMPMGPFRLVDLVGFGVAI 547
Query: 542 ATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECR 601
AT +F + FP+R+++S L+ ++ + R G+ KG Y Y+ K PDP + +E+ R
Sbjct: 548 ATGGQFVQNFPERTYKSMLIPIMQEDKRAGETTRKGFYVYDDKRKASPDPELKKYVEKAR 607
Query: 602 RLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYR 661
+S + K + +++K+IVEMI FPVVNE+CRV EGI V+A+DLD A V+GM FP YR
Sbjct: 608 GISGVAIDPKLMKLSDKDIVEMIFFPVVNEACRVYAEGIAVKAADLDIAGVMGMGFPPYR 667
Query: 662 GGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSAPVSSS 714
GGI+FWAD++G+ Y+Y+ L+ WS LYG FFKP +L ERA KG PLS+P+ +
Sbjct: 668 GGIMFWADSLGSKYIYSRLEAWSNLYGGFFKPCAYLAERAAKGAPLSSPLERA 720
>gi|224107106|ref|XP_002314377.1| predicted protein [Populus trichocarpa]
gi|222863417|gb|EEF00548.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 884 bits (2283), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/716 (59%), Positives = 543/716 (75%), Gaps = 4/716 (0%)
Query: 5 RVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGG 64
R T+EVG DGVA+IT+INPPVN+L+ ++ LKD FE+A RDDVKAIV+TG G+FSGG
Sbjct: 9 RTTIEVGADGVALITIINPPVNSLSFDVLYSLKDSFEQALRRDDVKAIVITGAKGKFSGG 68
Query: 65 FDINVFQKVHGAGDVSLMPD-VSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
FDI+ F V G P +SVE++ + +E KKP VAA++GLALGGGLE+AM CHAR
Sbjct: 69 FDISSFGGVQGGKSNEPKPGFISVEILSDTVEAAKKPSVAAIDGLALGGGLEVAMACHAR 128
Query: 124 IAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAV 180
I+ QLGLPEL LG+IPG TQRLPRLVG+SKA+EMML SK + EE LGL+DAV
Sbjct: 129 ISTSTAQLGLPELQLGLIPGFGGTQRLPRLVGISKALEMMLTSKPVKGEEAHALGLVDAV 188
Query: 181 VTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQ 240
V+ EL+ +R WALDI RR+PWI SL++T+KL SL EARE+ K AR Q +K APN+
Sbjct: 189 VSPNELVSTARQWALDILERRRPWIASLYKTEKLDSLGEAREIFKFAREQVRKRAPNLTH 248
Query: 241 HQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGL 300
C+DVIE GIV G G+ KE + F ELV DT + L+H+FFAQR T+KVP +TD+GL
Sbjct: 249 PIVCIDVIEHGIVSGPRDGLYKELESFHELVRSDTCKSLIHIFFAQRGTTKVPGITDLGL 308
Query: 301 KPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGK 360
PR V+KVAV+GGGLMGSGIATA +L+N V+LKEVN+++L GI + AN++ V +G+
Sbjct: 309 VPRRVKKVAVLGGGLMGSGIATALVLSNYPVILKEVNNQFLQAGIGRVRANLQSRVKKGR 368
Query: 361 LTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 420
+TQ+K + +LKG LDY FKDVDMVIEAVIE+V LKQ+IFS+LEK CPPHCILA+NT
Sbjct: 369 MTQEKFEKTMSLLKGALDYESFKDVDMVIEAVIENVSLKQQIFSDLEKYCPPHCILASNT 428
Query: 421 STIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVP 480
STIDLN++G++T SQDRIIGAHFFSPAHVMPLLEIVRT++TS QVI+DL+ VGK I+K P
Sbjct: 429 STIDLNLIGKQTKSQDRIIGAHFFSPAHVMPLLEIVRTKQTSPQVIVDLLDVGKKIRKTP 488
Query: 481 VVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVA 540
VVVGNCTGFAVNR FFPY+Q+A LLV G D+++ID I FG+P+GPF+L+DL G+GVA
Sbjct: 489 VVVGNCTGFAVNRMFFPYTQAALLLVEHGADLYQIDKVITKFGMPMGPFRLVDLVGFGVA 548
Query: 541 AATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEEC 600
AT +F FP+R+++S L+ L+ + R G+ KG Y Y+ K KPDP + IE+
Sbjct: 549 IATGTQFVVNFPERTYKSMLIPLMQEDKRAGETTRKGFYLYDDRRKAKPDPELRKYIEKA 608
Query: 601 RRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSY 660
R +S + K + EK+IVEMI FPVVNE+CRV EGI V+A+DLD +S++GM FP Y
Sbjct: 609 RNISGVANDPKLAKLPEKDIVEMIFFPVVNEACRVFAEGIAVKAADLDISSLMGMGFPPY 668
Query: 661 RGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSAPVSSSST 716
RGGI+FWAD++G+ Y+Y+ L++WS+ YG FFKP FL ERA KG PLS+PV + +
Sbjct: 669 RGGIMFWADSLGSKYIYSRLEEWSKTYGEFFKPCAFLAERAAKGAPLSSPVDQAKS 724
>gi|449522793|ref|XP_004168410.1| PREDICTED: glyoxysomal fatty acid beta-oxidation multifunctional
protein MFP-a-like isoform 1 [Cucumis sativus]
Length = 794
Score = 880 bits (2275), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/710 (59%), Positives = 545/710 (76%), Gaps = 4/710 (0%)
Query: 2 AAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRF 61
A R MEVG DGVAIIT+INPPVN+L+ ++ L+D +E+A RDDVKAIV+TG G+F
Sbjct: 5 AKGRTVMEVGTDGVAIITIINPPVNSLSFDVLFSLRDSYEQALRRDDVKAIVVTGAKGKF 64
Query: 62 SGGFDINVFQKVHGA-GDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
SGGFDI F + G G+ + ++S+E++ ++ E +KP VAA++GLALGGGLE+AM C
Sbjct: 65 SGGFDITAFGVLQGGKGEQPNVRNISIEMITDIFEAARKPAVAAIDGLALGGGLEVAMAC 124
Query: 121 HARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 177
HARI+ P QLGLPEL LG+IPG TQRLPRLVGLSKA+EMML SK I +E LGL+
Sbjct: 125 HARISTPTAQLGLPELQLGIIPGFGGTQRLPRLVGLSKALEMMLTSKPIKGQEAHSLGLV 184
Query: 178 DAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 237
DA+V EEL+ +R WAL+I RR+PW+ SLHRTDKL SL+EAR++ LAR QAKK PN
Sbjct: 185 DAIVPPEELINTARRWALEILERRRPWVHSLHRTDKLESLAEARKIFNLARAQAKKQYPN 244
Query: 238 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 297
+ AC+D +E G+V G +G+ KEA+ F+ L+ DT + L+H+FFAQR+T+KVP VTD
Sbjct: 245 LKHTIACIDAVETGVVSGPRAGLWKEAEEFQGLLHSDTCKSLIHIFFAQRSTTKVPGVTD 304
Query: 298 IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 357
+GL PR ++KVA++GGGLMGSGIATA IL+N +VVLKEVN ++L GI + AN++ V
Sbjct: 305 LGLVPRQIKKVAIVGGGLMGSGIATALILSNYHVVLKEVNDKFLQAGIDRVRANLQSRVK 364
Query: 358 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 417
+G +T +K ++ +LKGVL+Y FKDVDMVIEAVIE+V LKQ+IFS+LEK CPPHC+LA
Sbjct: 365 KGNMTNEKFEKSISLLKGVLNYESFKDVDMVIEAVIENVSLKQQIFSDLEKYCPPHCMLA 424
Query: 418 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 477
TNTSTIDL ++GE+ S+DRIIGAHFFSPAH+MPLLEIVRT+ T+AQVI+DL+ VGK IK
Sbjct: 425 TNTSTIDLELIGERIKSRDRIIGAHFFSPAHIMPLLEIVRTKHTAAQVIVDLLDVGKNIK 484
Query: 478 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGY 537
K PVVVGNCTGFAVNR FFPYSQ+A LL GVD ++ID AI FG+P+GPF+L DL G+
Sbjct: 485 KTPVVVGNCTGFAVNRMFFPYSQAAILLAEHGVDPYQIDRAISKFGMPMGPFRLCDLVGF 544
Query: 538 GVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPII 597
GVAAAT+ +F +AFP+R+++S L+ L+ + G++ KG Y Y+K K P+P + I
Sbjct: 545 GVAAATASQFVQAFPERTYKSMLIPLMQEDKNAGESTRKGFYVYDKNRKAGPNPELKKYI 604
Query: 598 EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSF 657
E+ R S + K + EK+IVEMI FPVVNE+CRVL EGI V+A+DLD A V+GM F
Sbjct: 605 EKARNSSGVSVDPKLTKLPEKDIVEMIFFPVVNEACRVLAEGIAVKAADLDIAGVMGMGF 664
Query: 658 PSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPL 707
PSYRGG++FWAD++G+NY+Y+ L++WS+ YG FFKP +L ERA +G L
Sbjct: 665 PSYRGGLMFWADSLGSNYIYSRLEEWSKQYGGFFKPCGYLAERAVQGATL 714
>gi|171854673|dbj|BAG16526.1| putative glyoxysomal fatty acid beta-oxidation multifunctional
protein [Capsicum chinense]
Length = 725
Score = 869 bits (2245), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/708 (58%), Positives = 541/708 (76%), Gaps = 4/708 (0%)
Query: 5 RVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGG 64
R T++VG DGVA+IT+INPPVN+LA+ ++ LK+ +E+A RDDVKAIV+TG G+FSGG
Sbjct: 8 RTTIDVGADGVAVITIINPPVNSLALDVLYSLKENYEQALRRDDVKAIVVTGANGKFSGG 67
Query: 65 FDINVFQKVHGAGDVSLMPD-VSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
FDI+ F K+ G S P +SVE++ + +E +KP VAA++GLALGGGLE+AM CHAR
Sbjct: 68 FDISAFGKLQGGTVESPKPGFISVEILTDTVEAARKPSVAAIDGLALGGGLEVAMACHAR 127
Query: 124 IAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAV 180
I+ P QLGLPEL LGV+PG TQRLPRLVGL+K++EM+L SK + EE LGL+DAV
Sbjct: 128 ISTPNAQLGLPELQLGVLPGFGGTQRLPRLVGLAKSLEMILTSKPVKGEEAVNLGLVDAV 187
Query: 181 VTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQ 240
V S +LL +R WALDI RKPW+ SLH+TDK+ L EARE+ K AR+Q +K APN+
Sbjct: 188 VPSNQLLGTARKWALDILECRKPWVASLHKTDKIEPLGEAREIFKFARVQTRKQAPNLQH 247
Query: 241 HQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGL 300
+DVIEEGIV G +G+ KEA+ F+ L+ DT + LV+VFFAQRAT+KVP VTD+GL
Sbjct: 248 LLVVIDVIEEGIVSGPLAGLWKEAEAFQALLHSDTCKALVNVFFAQRATTKVPGVTDLGL 307
Query: 301 KPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGK 360
KPR ++KVA++GGGLMGSGIATA + + V+LKEVN ++L G+ ++AN++ V +GK
Sbjct: 308 KPRRIKKVAILGGGLMGSGIATALLRSGYPVILKEVNDKFLQAGLGRVKANLQSSVKKGK 367
Query: 361 LTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 420
++Q+K L +LKG LDY F+DVDMVIEAVIE+V LKQ++F++LEK CP HCILA+NT
Sbjct: 368 MSQEKFEKTLSLLKGALDYEGFRDVDMVIEAVIENVSLKQQVFADLEKYCPSHCILASNT 427
Query: 421 STIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVP 480
STIDLN++GEKT SQDRIIGAHFFSPAHVMPLLEIVRT++TS Q+I+DL+ VGK IKK P
Sbjct: 428 STIDLNLIGEKTKSQDRIIGAHFFSPAHVMPLLEIVRTQKTSPQIIVDLLDVGKKIKKTP 487
Query: 481 VVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVA 540
VVVGNCTGFAVNR FFPY+Q+A LLV G DVFRID I FG+P+GPF+L DL G+GVA
Sbjct: 488 VVVGNCTGFAVNRMFFPYTQAALLLVERGADVFRIDRIITKFGMPMGPFRLCDLVGFGVA 547
Query: 541 AATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEEC 600
AT +F FP+R+++S L+ L+ + R G+ KG Y Y+ K PDP + IE+
Sbjct: 548 IATGGQFVMNFPERTYKSMLIPLMQEDKRAGETTRKGFYVYDDRRKASPDPEIKKYIEKA 607
Query: 601 RRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSY 660
R +S + K +++K+I+EMI FPVVNE+CRVL EGI V++SDLD ++++GM FP Y
Sbjct: 608 REMSGVTIDHKMAKLSDKDIIEMIFFPVVNEACRVLAEGIAVKSSDLDISAIMGMGFPPY 667
Query: 661 RGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLS 708
RGGI+FWAD +G+ Y+ + L +WS++YG+FFKP +L ERA KG PLS
Sbjct: 668 RGGIIFWADTLGSKYICSRLDEWSRMYGDFFKPCSYLAERAAKGAPLS 715
>gi|356521845|ref|XP_003529561.1| PREDICTED: glyoxysomal fatty acid beta-oxidation multifunctional
protein MFP-a-like [Glycine max]
Length = 724
Score = 867 bits (2241), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/714 (57%), Positives = 541/714 (75%), Gaps = 3/714 (0%)
Query: 8 MEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDI 67
MEVG DGVA+IT++NPPVN+L+ ++ LK+ F++A RDDVKAIV+TG G+FSGGFDI
Sbjct: 10 MEVGPDGVAVITIVNPPVNSLSFDVLRSLKESFDQAIQRDDVKAIVVTGAKGKFSGGFDI 69
Query: 68 NVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP 127
+ F + A + +SVE++ + IE +KP VAA++GLALGGGLE+AM C+AR++ P
Sbjct: 70 SAFGGIQEAKERPKPGWISVEIITDTIEAARKPSVAAIDGLALGGGLEVAMACNARLSTP 129
Query: 128 KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 184
QLGLPEL LG+IPG TQRLPRLVGL+K +EM+L SK + +E + LGL+D +V+
Sbjct: 130 TAQLGLPELQLGIIPGFGGTQRLPRLVGLTKGLEMILASKPVKGKEAFSLGLVDGLVSPN 189
Query: 185 ELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 244
+L+ +R WALD+ R+PWI SL++T+KL L EARE+LK AR QA+K APN+ C
Sbjct: 190 DLVNTARQWALDMLGHRRPWIASLYKTEKLEPLGEAREILKFARAQARKRAPNLQHPLVC 249
Query: 245 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRG 304
+DVIE GIV G +G+ KEA+ F+ LV DT + LVHVFFAQR TSKVP VTD GL PR
Sbjct: 250 IDVIEAGIVAGPRAGLWKEAEAFEGLVRSDTCKSLVHVFFAQRGTSKVPGVTDCGLAPRQ 309
Query: 305 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 364
V+KVA+IGGGLMGSGIATA IL+N V+LKEVN ++L GI I+AN++ V +GKLT++
Sbjct: 310 VKKVAIIGGGLMGSGIATALILSNYPVILKEVNEKFLDAGINRIKANLQSRVKKGKLTKE 369
Query: 365 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 424
+ +LKG LDY F+DVD+VIEAVIE++ LKQ+IFS+LEK CPPHCILA+NTSTID
Sbjct: 370 NFEKTISLLKGSLDYESFRDVDLVIEAVIENISLKQQIFSDLEKYCPPHCILASNTSTID 429
Query: 425 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 484
LN++GEKT SQDRI+GAHFFSPAHVMPLLEIVRT++TS QVI+D++ + K IKK PVVVG
Sbjct: 430 LNLIGEKTKSQDRIVGAHFFSPAHVMPLLEIVRTKQTSPQVIVDVLDISKKIKKTPVVVG 489
Query: 485 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATS 544
NCTGFAVNR FFPY+Q+ LLV G DV++ID I FG+P+GPF+L DL G+GVA AT
Sbjct: 490 NCTGFAVNRMFFPYTQAGLLLVERGADVYQIDRIITKFGMPMGPFRLADLVGFGVAIATG 549
Query: 545 KEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLS 604
+F + FP+R+++S L+ LL + R G+ KG Y Y+ K PDP + IE+ R +S
Sbjct: 550 TQFIQNFPERTYKSMLIPLLQEDNRAGETTRKGFYLYDDKRKASPDPELKNYIEKARSIS 609
Query: 605 NIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGI 664
+ K + EK+I+EMI FPVVNE+CRVL+EGI V+A+DLD ++++GM FP YRGGI
Sbjct: 610 GVSVDPKLAKLQEKDIIEMIFFPVVNEACRVLDEGIAVKAADLDISAIMGMGFPPYRGGI 669
Query: 665 VFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSAPVSSSSTSR 718
+FWAD++G+ Y+Y+ L+KWS+LYG FFKP +L RA KGIPLSA + + SR
Sbjct: 670 IFWADSLGSKYIYSRLEKWSELYGEFFKPCAYLAARAAKGIPLSASLEQQAKSR 723
>gi|296083347|emb|CBI22983.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 867 bits (2239), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/754 (56%), Positives = 544/754 (72%), Gaps = 44/754 (5%)
Query: 5 RVTMEVGNDGVAIITLINPPVNALA----------------------------------- 29
R MEVG DGVA+ITLINPPVN+L+
Sbjct: 8 RTVMEVGADGVALITLINPPVNSLSFDECSLRLRFEVLLSFSRKWEEFIFLLDALKRKKG 67
Query: 30 ------IPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMP 83
+P++ LK+ +EEA RDDVKAIV+TG G+FSGGFDI F + G+VS
Sbjct: 68 LPVKLHLPVLNSLKESYEEALRRDDVKAIVITGAKGKFSGGFDITAFGGIQAGGEVSKPG 127
Query: 84 DVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG 143
VSVE++ + +E +KP VAA++GLALGGGLE+AMGCHARI+ P QLGLPEL LG+IPG
Sbjct: 128 FVSVEILTDTVEAARKPSVAAIDGLALGGGLEVAMGCHARISTPNAQLGLPELQLGIIPG 187
Query: 144 ---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAAR 200
TQRLPRLVGLSKA+EMML+SK + + LGL+DAVV ++L+K +R WALDI
Sbjct: 188 FGGTQRLPRLVGLSKALEMMLMSKPVKGVDAHSLGLVDAVVAPDQLVKTARQWALDILEC 247
Query: 201 RKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGV 260
R+PW+ SL++TDKL L EARE+LK AR QA+K APN+ C+DVIE GIV G +G+
Sbjct: 248 RRPWVHSLYKTDKLEPLGEAREILKFARTQAQKQAPNLKHPLLCIDVIEAGIVSGPVAGL 307
Query: 261 LKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGI 320
KEA+ F+EL+ D + LVH+FFAQR TSKVP + D+GL PR + KVA++GGGLMGSGI
Sbjct: 308 WKEAEAFQELLHSDICKSLVHIFFAQRGTSKVPGIADLGLVPRRINKVAILGGGLMGSGI 367
Query: 321 ATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS 380
ATA +L+N V+LKEVN ++L GI + AN++ V +G +TQ+K +LKGVLDY
Sbjct: 368 ATALMLSNYPVILKEVNEKFLQAGIGRVRANLQSRVKKGAMTQEKFEKTFSLLKGVLDYE 427
Query: 381 EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIG 440
FKDVDMVIEAVIE+V LKQ+IF++LEK CPPHCILA+NTSTIDLN++GEKT S DRI+G
Sbjct: 428 SFKDVDMVIEAVIENVSLKQQIFADLEKFCPPHCILASNTSTIDLNLIGEKTRSHDRIVG 487
Query: 441 AHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQ 500
AHFFSPAHVMPLLEIVRT+RTS QVI+DL+ +GK IKK PVVVGNCTGFAVNR F PY+Q
Sbjct: 488 AHFFSPAHVMPLLEIVRTQRTSPQVIVDLLDIGKKIKKTPVVVGNCTGFAVNRMFSPYTQ 547
Query: 501 SARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPL 560
+A LLV G DV++ID AI FG+P+GPF+L+DL G+GVA AT +F + FP+R+++S L
Sbjct: 548 AALLLVEHGADVYQIDRAITKFGMPMGPFRLVDLVGFGVAIATGGQFVQNFPERTYKSML 607
Query: 561 VDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEI 620
+ ++ + R G+ KG Y Y+ K PDP + +E+ R +S + K + +++K+I
Sbjct: 608 IPIMQEDKRAGETTRKGFYVYDDKRKASPDPELKKYVEKARGISGVAIDPKLMKLSDKDI 667
Query: 621 VEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSL 680
VEMI FPVVNE+CRV EGI V+A+DLD A V+GM FP YRGGI+FWAD++G+ Y+Y+ L
Sbjct: 668 VEMIFFPVVNEACRVYAEGIAVKAADLDIAGVMGMGFPPYRGGIMFWADSLGSKYIYSRL 727
Query: 681 KKWSQLYGNFFKPSRFLEERATKGIPLSAPVSSS 714
+ WS LYG FFKP +L ERA KG PLS+P+ +
Sbjct: 728 EAWSNLYGGFFKPCAYLAERAAKGAPLSSPLERA 761
>gi|210257071|dbj|BAG80663.1| multifunctional protein [Nicotiana tabacum]
Length = 668
Score = 866 bits (2238), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/657 (64%), Positives = 520/657 (79%), Gaps = 8/657 (1%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
+ ME+GNDGVA+IT+ NPPVNAL + + LK ++EA D VKAIVL+G GRF GG
Sbjct: 7 INMEIGNDGVAVITVHNPPVNALTLSALEELKRCYQEAIDSDTVKAIVLSGADGRFCGGL 66
Query: 66 DINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA 125
DI+V + VH GD+SL+PD S+ LVVN +E+ KKP VAA++G ALGGGLELAMGC ARIA
Sbjct: 67 DISVVENVHKHGDISLLPDASIGLVVNKMENGKKPSVAAIQGFALGGGLELAMGCSARIA 126
Query: 126 APKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 182
K LGLPEL LGVIPG TQRLPRLVG SKA++M++ SK+ITSEEG +LGLIDA+V+
Sbjct: 127 TAKADLGLPELKLGVIPGCGGTQRLPRLVGTSKAVDMLMSSKTITSEEGKELGLIDAIVS 186
Query: 183 SEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQ 242
SEELL V+R WALDI R+P SL +TDKLG E+ E+LK AR + + P +
Sbjct: 187 SEELLAVARCWALDIVEGRQPHCNSLEKTDKLGPKDESLEILKSARQRYRA-----PHYS 241
Query: 243 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 302
ACLDVIEEGI+ GG+SGVLKE KVFKELV+ +T++GL+HVF A+RATSKVP VTDIGLKP
Sbjct: 242 ACLDVIEEGIISGGFSGVLKEDKVFKELVLSNTAKGLLHVFLAERATSKVPGVTDIGLKP 301
Query: 303 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 362
R + KVAV+GGGLMGSGIATA I++N+ VV+KE+N EYLLK +K++EAN++GLVTRG+L
Sbjct: 302 RRIEKVAVVGGGLMGSGIATALIMSNMNVVVKEINHEYLLKAMKSVEANLQGLVTRGQLN 361
Query: 363 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 422
QDK L +LKG LDY + KDVDMVIEAV E V LKQ IF ++EK C P CI A+NTST
Sbjct: 362 QDKMKRTLSLLKGTLDYEDLKDVDMVIEAVNEVVSLKQSIFEDIEKVCSPDCIFASNTST 421
Query: 423 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 482
I L+++GE+TSSQDRI+G H FSPAHVM L+EIVRTE TS QVI+D++ K +KKVP+V
Sbjct: 422 ISLDVIGERTSSQDRILGIHLFSPAHVMTLVEIVRTENTSPQVIVDVIRFTKTMKKVPIV 481
Query: 483 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAA 542
V NCTGFAVNR FFPY Q LL +LGVD+FR+D I FG+ +GPFQL DL+GYG+ A
Sbjct: 482 VKNCTGFAVNRNFFPYMQGPDLLANLGVDIFRVDRVITEFGMRLGPFQLQDLSGYGIFLA 541
Query: 543 TSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRR 602
KEF AFPDR+FQSPLV L++++GR GK NGKG YTY+KGSKP+ D SV+ ++EE R
Sbjct: 542 GVKEFVAAFPDRAFQSPLVQLMVENGREGKKNGKGYYTYKKGSKPEADHSVIQVVEESMR 601
Query: 603 LSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPS 659
+NI PGGKPISVT++EI+EMI FPVVNE+CRV+EEGIVVRASD+D ASV G FPS
Sbjct: 602 FTNIAPGGKPISVTDEEILEMIFFPVVNEACRVIEEGIVVRASDIDIASVHGFKFPS 658
>gi|351723429|ref|NP_001234975.1| peroxisomal fatty acid beta-oxidation multifunctional protein
[Glycine max]
gi|167962162|dbj|BAG09370.1| peroxisomal fatty acid beta-oxidation multifunctional protein
[Glycine max]
Length = 723
Score = 866 bits (2238), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/712 (58%), Positives = 539/712 (75%), Gaps = 3/712 (0%)
Query: 8 MEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDI 67
MEVG DGVA+IT++NPPVN+L+ ++ LK+ F++A RDDVKAIV+TG G+FSGGFDI
Sbjct: 10 MEVGPDGVAVITIVNPPVNSLSFDVLRSLKESFDQAIQRDDVKAIVVTGAKGKFSGGFDI 69
Query: 68 NVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP 127
+ F + A + +SVE++ + IE +KP VAA++GLALGGGLE+AM C+AR++ P
Sbjct: 70 SAFGGIQEAKERPKPGWISVEIITDTIEAARKPSVAAIDGLALGGGLEVAMACNARLSTP 129
Query: 128 KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 184
QLGLPEL LG+IPG TQRLPRLVGL+K +EM+L SK + +E + LGL+D +V+
Sbjct: 130 TAQLGLPELQLGIIPGFGGTQRLPRLVGLTKGLEMILASKPVKGKEAFSLGLVDGLVSPN 189
Query: 185 ELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 244
+L+ +R WALD+ R+PWI SL++T+KL L EARE+LK AR QA+K APN+ C
Sbjct: 190 DLVNTARQWALDMLGHRRPWIASLYKTEKLEPLGEAREILKFARAQARKRAPNLQHPLVC 249
Query: 245 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRG 304
+DVIE GIV G +G+ KEA+ F+ LV DT + LVHVFFAQR TSKVP VTD GL PR
Sbjct: 250 IDVIEAGIVAGPRAGLWKEAEAFEGLVRSDTCKSLVHVFFAQRGTSKVPGVTDCGLAPRQ 309
Query: 305 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 364
V+KVA+IGGGLMGSGIATA IL+N V+LKEVN ++L GI I+AN++ V +GKLT++
Sbjct: 310 VKKVAIIGGGLMGSGIATALILSNYPVILKEVNEKFLDAGINRIKANLQSRVKKGKLTKE 369
Query: 365 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 424
+ +LKG LDY F+DVDMVIEAVIE++ LKQ+IFS+LEK CPPHCILA+NTSTID
Sbjct: 370 NFEKTISLLKGSLDYESFRDVDMVIEAVIENISLKQQIFSDLEKYCPPHCILASNTSTID 429
Query: 425 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 484
LN++GEKT +QDRI+GAHFFSPAHVMPLLEIVRT++TSAQVI+D++ + K IKK PVVVG
Sbjct: 430 LNLIGEKTKTQDRIVGAHFFSPAHVMPLLEIVRTKQTSAQVIVDVLDISKKIKKTPVVVG 489
Query: 485 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATS 544
NCTGFAVNR FFPY+Q+ LLV G DV++ID I FG+P+GPF+L+DL G+GVA AT
Sbjct: 490 NCTGFAVNRMFFPYTQAGLLLVERGADVYQIDRVITKFGMPMGPFRLMDLVGFGVAIATG 549
Query: 545 KEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLS 604
+F + FP+R+++S L+ LL + R G+ KG Y Y K PDP + IE+ R +S
Sbjct: 550 MQFIQNFPERTYKSMLISLLQEDKRAGETTHKGFYLYNDKRKASPDPELKNYIEKARSIS 609
Query: 605 NIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGI 664
+ K + EK+I+EMI FPVVNE+CRVL+EGI V+A+DLD ++++GM FP YRGGI
Sbjct: 610 GVSVDPKLAKLQEKDIIEMIFFPVVNEACRVLDEGIAVKAADLDISAIMGMGFPPYRGGI 669
Query: 665 VFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSAPVSSSST 716
+FWAD++G+ Y+Y+ L+KWS+LYG FFKP L RA KGIPLSA V +
Sbjct: 670 IFWADSLGSKYIYSRLEKWSELYGEFFKPCANLAARAAKGIPLSASVEQGKS 721
>gi|356564184|ref|XP_003550336.1| PREDICTED: peroxisomal fatty acid beta-oxidation multifunctional
protein MFP2-like [Glycine max]
Length = 722
Score = 862 bits (2227), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/715 (57%), Positives = 541/715 (75%), Gaps = 10/715 (1%)
Query: 8 MEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDI 67
MEVG DGVAIIT++NPPVN+L+ ++ K+ F++A RDDVKAIV+TG GRFSGGFDI
Sbjct: 10 MEVGPDGVAIITIVNPPVNSLSYDVLRSFKENFDQALQRDDVKAIVVTGAKGRFSGGFDI 69
Query: 68 NVFQKVHGAGDVSLMPD---VSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
+ F GA P +SVE++ + IE +KP+VAA++GLALGGGLE AM C+AR+
Sbjct: 70 SAF----GAQKPEERPKPGWLSVEIITDTIEAARKPLVAAIDGLALGGGLEFAMACNARL 125
Query: 125 AAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVV 181
+ P +LGLPEL LG+IPG TQRLPRLVGL+KA+EMML SK + +E + LGL+D ++
Sbjct: 126 STPTAKLGLPELQLGIIPGLGGTQRLPRLVGLTKALEMMLTSKPVKGKEAFSLGLVDGLM 185
Query: 182 TSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 241
+ ++L+ + WALDI RR+PWI SL++TDKL L EARE+LK AR Q +K APN+
Sbjct: 186 SPDDLVNTACQWALDIMGRRRPWIASLYKTDKLEPLGEAREILKFARAQVQKRAPNLQHP 245
Query: 242 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 301
C+DVIE G+V G +G+ KE + + L+ DTS+ L+HVFF+QR TSKVP VTD GL
Sbjct: 246 LVCIDVIEAGVVAGPRAGLWKEVEASEGLIKSDTSKSLIHVFFSQRGTSKVPGVTDCGLV 305
Query: 302 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 361
PR V+KVA+IGGGLMGSGIATA IL++ ++LKEVN ++L GI I+AN++ V +GKL
Sbjct: 306 PRHVKKVAIIGGGLMGSGIATALILSSYPIILKEVNEKFLEAGINRIKANLQSRVKKGKL 365
Query: 362 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 421
TQ+ N + +LKG LDY FKDVDMVIEAV+E+V LKQ+IF++LEK CPPHCILA+NTS
Sbjct: 366 TQENFENTVSLLKGTLDYESFKDVDMVIEAVVENVSLKQQIFADLEKYCPPHCILASNTS 425
Query: 422 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 481
TIDLN++GE+T SQDRI+GAHFFSPAHVMPLLEIVRT++TSAQV++D++ + K IKK PV
Sbjct: 426 TIDLNLIGERTKSQDRIVGAHFFSPAHVMPLLEIVRTKQTSAQVVVDVLDISKKIKKTPV 485
Query: 482 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAA 541
VVGNCTGFAVNR FFPY+Q+ LV G DV++ID I FG+P+GPF+L+DL G+GVA
Sbjct: 486 VVGNCTGFAVNRMFFPYTQAGLFLVEHGADVYQIDRVITKFGMPMGPFRLVDLVGFGVAI 545
Query: 542 ATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECR 601
AT +F + FP+R+++S L+ LL + R G+ KG Y Y+ KP PDP + IE+ R
Sbjct: 546 ATGMQFIQNFPERTYKSMLIPLLQEDKRAGETTRKGFYLYDDKCKPSPDPELKNYIEKAR 605
Query: 602 RLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYR 661
+ + K + + EK+I+EM FPVVNE+CRVL+EGI V+ SDLD ++V+GM FP YR
Sbjct: 606 SFTGVSVDPKLVKLQEKDIIEMTFFPVVNEACRVLDEGIAVKGSDLDISAVMGMGFPPYR 665
Query: 662 GGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSAPVSSSST 716
GGI+FWAD++G+ Y+Y+ L+KWS+LYG FFKP +L RA KGIPLSA V +++
Sbjct: 666 GGILFWADSLGSKYIYSKLEKWSELYGEFFKPCAYLAARAAKGIPLSASVEQANS 720
>gi|449460957|ref|XP_004148210.1| PREDICTED: LOW QUALITY PROTEIN: glyoxysomal fatty acid
beta-oxidation multifunctional protein MFP-a-like
[Cucumis sativus]
Length = 713
Score = 862 bits (2226), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/714 (58%), Positives = 538/714 (75%), Gaps = 18/714 (2%)
Query: 2 AAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRF 61
A R MEVG DGVAIIT+INPPVN+L+ ++ L+D +E+A RDDVKAIV+TG G+F
Sbjct: 5 AKGRTVMEVGTDGVAIITIINPPVNSLSFDVLFSLRDSYEQALRRDDVKAIVVTGAKGKF 64
Query: 62 SGGFDINVFQKVHGA-GDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
SGGFDI F + G G+ + ++S+E++ ++ E +KP VAA++GLALGGGLE+AM C
Sbjct: 65 SGGFDITAFGVLQGGKGEQPNVRNISIEMITDIFEAARKPAVAAIDGLALGGGLEVAMAC 124
Query: 121 HARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 177
HARI+ P QLGLPEL LG+IPG TQRLPRLVGLSKA+EMML SK I +E LGL+
Sbjct: 125 HARISTPTAQLGLPELQLGIIPGFGGTQRLPRLVGLSKALEMMLTSKPIKGQEAHSLGLV 184
Query: 178 DAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 237
DA+V EEL+ +R WAL+I RR+PW+ SLHRTDKL SL+EAR++ LAR QAKK PN
Sbjct: 185 DAIVPPEELINTARRWALEILERRRPWVHSLHRTDKLESLAEARKIFNLARAQAKKQYPN 244
Query: 238 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 297
+ AC+D +E G+V G +G+ KEA+ F+ L+ DT + L+H+FFAQR+T+KVP VTD
Sbjct: 245 LKHTIACIDAVETGVVSGPRAGLWKEAEEFQGLLHSDTCKSLIHIFFAQRSTTKVPGVTD 304
Query: 298 IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 357
+GL PR ++KVA++GGGLMGSGIATA IL+N VVLKEVN ++L GI + AN++ V
Sbjct: 305 LGLVPRQIKKVAIVGGGLMGSGIATALILSNYPVVLKEVNDKFLQAGIDRVRANLQSRVK 364
Query: 358 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 417
+G +T +K ++ +LKGVL+Y FKDVDMVIEAVIE+V LKQ+IFS+LEK CPPHC+LA
Sbjct: 365 KGNMTNEKFEKSISLLKGVLNYESFKDVDMVIEAVIENVSLKQQIFSDLEKYCPPHCMLA 424
Query: 418 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 477
TNTSTIDL ++GE+ S+DRIIGAHFFSPAH+MPLLEIVRT+ T+AQVI+DL+ VGK IK
Sbjct: 425 TNTSTIDLELIGERIKSRDRIIGAHFFSPAHIMPLLEIVRTKHTAAQVIVDLLDVGKNIK 484
Query: 478 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGY 537
K PVVVGNCTGFAVNR FFPYSQ+A LL GVD ++ID AI FG+P+GPF+L DL G+
Sbjct: 485 KTPVVVGNCTGFAVNRMFFPYSQAAILLAEHGVDPYQIDRAISKFGMPMGPFRLCDLVGF 544
Query: 538 GVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRN-GKANGKGLYTYEKGSKPKPDPSVLPI 596
GVAAAT+ +F V L++ +N G++ KG Y Y+K K P+P +
Sbjct: 545 GVAAATASQF-------------VXPLMQEDKNAGESTRKGFYVYDKNRKAGPNPELKKY 591
Query: 597 IEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMS 656
IE+ R S + K + EK+IVEMI FPVVNE+CRVL EGI V+A+DLD A V+GM
Sbjct: 592 IEKARNSSGVSVDPKLTKLPEKDIVEMIFFPVVNEACRVLAEGIAVKAADLDIAGVMGMG 651
Query: 657 FPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSAP 710
FPSYRGG++FWAD++G+NY+Y+ L++WS+ YG FFKP +L ERA +G LSAP
Sbjct: 652 FPSYRGGLMFWADSLGSNYIYSRLEEWSKQYGGFFKPCGYLAERAVQGATLSAP 705
>gi|224130412|ref|XP_002328602.1| predicted protein [Populus trichocarpa]
gi|222838584|gb|EEE76949.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 860 bits (2223), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/714 (58%), Positives = 537/714 (75%), Gaps = 4/714 (0%)
Query: 7 TMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFD 66
T+EVG DGVA+ITLINPPVNAL+ ++ LKD +E+A RDDVKAIV+TG G+FSGG D
Sbjct: 11 TIEVGADGVALITLINPPVNALSSDVLNSLKDSYEQALRRDDVKAIVITGAKGKFSGGAD 70
Query: 67 INVFQKVHGAGDVSLMPD-VSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA 125
I+ F++V PD + E++ + +E KKP VAA++GLALGGGLE+AM CHARI+
Sbjct: 71 ISSFEEVQEGKVNEPKPDFIFSEVLGDTLEAAKKPSVAAIDGLALGGGLEVAMACHARIS 130
Query: 126 APKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 182
P QL LPEL LG+IPG TQRLPRLVG++KA+EMML SK + EE LGL+DAVV+
Sbjct: 131 TPTAQLSLPELQLGLIPGFGGTQRLPRLVGITKALEMMLTSKPVKGEEAHALGLVDAVVS 190
Query: 183 SEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQ 242
EL+ +R WALDI R+PWI SL++T+KL SL EARE+ K AR QA+K APN+
Sbjct: 191 PNELVSTARQWALDIFECRRPWIASLYKTEKLDSLGEAREIFKFARAQAQKRAPNLLHPI 250
Query: 243 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 302
C++V+E GIV G +G+ KE + F+ELV D S+ LVH+FFA T+KVP +TD+G P
Sbjct: 251 VCINVVEHGIVSGPRAGLYKEFESFQELVRSDISKSLVHIFFALHGTTKVPGITDLGFVP 310
Query: 303 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 362
R V+KVAV+GGGLMGSGIATA IL+N V+LKEVN ++L GI + AN++ V +GK+T
Sbjct: 311 RLVKKVAVLGGGLMGSGIATALILSNYPVILKEVNDQFLQAGIGRVRANLQSRVKKGKMT 370
Query: 363 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 422
Q+K + +LKG LDY FKDVDMVIEAVIE+V LKQ+IFS+LEK CPPHCILA+NTST
Sbjct: 371 QEKFEKTMSLLKGSLDYESFKDVDMVIEAVIENVSLKQQIFSDLEKYCPPHCILASNTST 430
Query: 423 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 482
IDLN++G++T SQDRIIGAHFFSPAHVMPLLEIVRT++TS QVI+DL+ VGK I+K PVV
Sbjct: 431 IDLNLIGKQTKSQDRIIGAHFFSPAHVMPLLEIVRTKQTSPQVIVDLLDVGKKIRKTPVV 490
Query: 483 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAA 542
VGNCTGFAVNR FFPY+Q+A LV GVD+++ID I FG+P+GPF+L DL G+GVA A
Sbjct: 491 VGNCTGFAVNRMFFPYTQAAIFLVEHGVDLYQIDRVISKFGMPMGPFRLADLVGFGVAIA 550
Query: 543 TSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRR 602
T +F + FP+R+++S L+ L+ + R G+ KG Y Y+ K KPDP + IE+ R
Sbjct: 551 TGMQFVENFPERTYKSMLLPLMQEDKRGGETTCKGFYLYDDRRKAKPDPELRKYIEKARS 610
Query: 603 LSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRG 662
+S + K + EK+IVEMI FPVVNE+CRV EGI V+A+DLD AS++GM FP YRG
Sbjct: 611 ISGVAVDPKLAKLPEKDIVEMIFFPVVNEACRVFAEGIAVKAADLDIASLMGMGFPPYRG 670
Query: 663 GIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSAPVSSSST 716
GI+FWAD+ G+ Y+Y+ L++WS+ YG FF+P FL ER KG PLS+PV + +
Sbjct: 671 GIMFWADSFGSKYIYSRLEEWSKTYGEFFEPCAFLAERGAKGAPLSSPVEQAKS 724
>gi|168025753|ref|XP_001765398.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683451|gb|EDQ69861.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 722
Score = 858 bits (2216), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/716 (60%), Positives = 553/716 (77%), Gaps = 5/716 (0%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
V MEVG DGVA+IT+ NPPVN+LAI ++ GLK+K+ EA RDDVKAIV+TG G+FSGGF
Sbjct: 5 VNMEVGADGVAVITIQNPPVNSLAIDVLLGLKEKYVEAAKRDDVKAIVVTGANGKFSGGF 64
Query: 66 DINVFQKVHGAGDVS--LMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
DI F K+ G S + VS +L++ IE+ KP VAAV GLALGGGLEL+M CHAR
Sbjct: 65 DITAFPKIQQGGKCSNGYLSKVSTDLMIETIEEASKPSVAAVAGLALGGGLELSMSCHAR 124
Query: 124 IAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAV 180
IA PK QLGLPEL LG+IPG TQRLPRLVGL+KAIEMMLLSK I SEEG +LGLID +
Sbjct: 125 IATPKAQLGLPELQLGIIPGFGGTQRLPRLVGLTKAIEMMLLSKPIASEEGKQLGLIDEI 184
Query: 181 VTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQ 240
V+ ++LL +R WALDIA+ +KP + SLHRTDKL SL EARE++K AR Q K+TAPN+
Sbjct: 185 VSPKDLLVTARQWALDIASGKKPRLSSLHRTDKLESLGEAREIIKFARAQVKRTAPNLTH 244
Query: 241 HQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGL 300
CLD +EEG++ GGY+G LKEA+ F V+ D ++GLV+VFFAQRAT+KVP + ++GL
Sbjct: 245 PLLCLDAVEEGVIAGGYAGNLKEAEAFAAAVVSDNAKGLVNVFFAQRATTKVPGIAELGL 304
Query: 301 KPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGK 360
KPR ++ VAV+GGGLMGSGI TA +L+ V+LKE+N ++L G+ ++AN++ V +GK
Sbjct: 305 KPRKIQNVAVVGGGLMGSGIVTALVLSGYSVILKEINDKFLQAGLGRVKANLQSRVKKGK 364
Query: 361 LTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 420
++Q+K L ++KGVL Y FK VDMVIEAVIE++ LKQ IF +LEK C CILATNT
Sbjct: 365 MSQEKFEKTLSLVKGVLTYDVFKSVDMVIEAVIENIDLKQSIFVDLEKNCKNDCILATNT 424
Query: 421 STIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVP 480
STIDLN+VG KT SQDR+IGAHFFSPAH+MPLLEIVRT++TS Q I+DLM +GK IKK P
Sbjct: 425 STIDLNLVGAKTRSQDRLIGAHFFSPAHIMPLLEIVRTDKTSPQAIVDLMALGKAIKKTP 484
Query: 481 VVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVA 540
V+VGNCTGFAVNR FFPY+ +A +L LGVD++RID+AI+S+G+P+GPF+L DL G+GV
Sbjct: 485 VLVGNCTGFAVNRVFFPYTMAAMMLSDLGVDIYRIDNAIKSWGMPMGPFRLTDLVGFGVG 544
Query: 541 AATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEEC 600
AA +F KAFPDR + S L+ +L++ R G+ N KG Y Y++ K +P P + II+E
Sbjct: 545 AAVGAQFVKAFPDRVYVSKLLPRMLEAQRLGEQNRKGFYVYDEKRKARPAPEIKEIIKES 604
Query: 601 RRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSY 660
+ S IMP GKP+++T+K+IVEMI+FPVVNE+CRVL E IVV+ASDLD ASVLGM FP Y
Sbjct: 605 QAESGIMPNGKPLAMTDKDIVEMIMFPVVNEACRVLAEKIVVQASDLDIASVLGMGFPPY 664
Query: 661 RGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSAPVSSSST 716
RGGIV WAD VGA Y+ + L W++ YG FFKP FLEERA G+ LSAP++ + +
Sbjct: 665 RGGIVCWADIVGAKYICSRLDTWARAYGGFFKPCAFLEERAASGVRLSAPINDTKS 720
>gi|357478819|ref|XP_003609695.1| Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a
[Medicago truncatula]
gi|355510750|gb|AES91892.1| Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a
[Medicago truncatula]
Length = 724
Score = 855 bits (2210), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/706 (58%), Positives = 534/706 (75%), Gaps = 4/706 (0%)
Query: 8 MEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDI 67
M VG DGVAIIT+INPPVN+L+ ++ LK+ F++A RDDVKAIV+TG G+FSGGFDI
Sbjct: 10 MNVGADGVAIITIINPPVNSLSFDVLQSLKESFDQAIQRDDVKAIVVTGAKGKFSGGFDI 69
Query: 68 NVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP 127
+ F + A + +S+E++ + IE KKP VAA++GLALGGGLE+AM C+AR++
Sbjct: 70 SAFGGLQEAKERPKPGWISIEIITDTIEAAKKPSVAAIDGLALGGGLEVAMACNARLSTA 129
Query: 128 KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 184
QLGLPEL LG+IPG TQRLPRLVGL+KA+EMML SK + ++ + GL+D +V+ +
Sbjct: 130 TAQLGLPELQLGIIPGFGGTQRLPRLVGLTKALEMMLTSKPVKGKDAFSSGLVDGLVSPD 189
Query: 185 ELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 244
+L+ +R WALDI RR+PWI SL++T+K+ L EARE+LK AR QA+K APN+ C
Sbjct: 190 QLVNTARQWALDILDRRRPWIASLYKTEKIEPLGEAREILKFARAQARKQAPNLKHPLVC 249
Query: 245 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRG 304
+DVIE GIV G +G+ KEA+ F LV DT + L+H+FFAQR TSKVP VTD GL PR
Sbjct: 250 IDVIEAGIVSGPRAGLWKEAEAFDALVQSDTCKSLIHIFFAQRGTSKVPGVTDRGLVPRP 309
Query: 305 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 364
V+KVA++GGGLMGSGIATA IL+N V+LKEVN ++L GI I+AN++ V +G LTQ+
Sbjct: 310 VKKVAILGGGLMGSGIATALILSNYSVILKEVNEKFLDAGINRIKANLQSRVKKGNLTQE 369
Query: 365 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 424
+ A ++KG LDY F+DVDMVIEAVIE+V LKQ+IF++LEK CPPHCIL +NTSTID
Sbjct: 370 RFEKAFSLVKGSLDYDSFRDVDMVIEAVIENVSLKQQIFADLEKYCPPHCILGSNTSTID 429
Query: 425 LNIVGEKTSSQDRIIGAHFF-SPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVV 483
L+++GEKT SQDRIIGAHFF PAHVMPLLEIVRT+RTS QVI+DL+ + K IKK PVVV
Sbjct: 430 LDLIGEKTKSQDRIIGAHFFRCPAHVMPLLEIVRTKRTSPQVIVDLLDISKKIKKTPVVV 489
Query: 484 GNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAAT 543
GNCTGFAVNR FFPY+Q+ LLV G DV++ID A+ FG+P+GP +L DL G+GVA AT
Sbjct: 490 GNCTGFAVNRVFFPYTQATLLLVERGADVYQIDKAVTKFGMPMGPLRLCDLVGFGVAVAT 549
Query: 544 SKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRL 603
+F + FP+R+++S L+ LL + R G+ KG Y Y+ K PDP + IE+ R +
Sbjct: 550 GSQFVQNFPERTYKSMLIPLLQEDKRAGETTRKGFYLYDDRRKASPDPELKKFIEKARSI 609
Query: 604 SNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGG 663
S + + + EK+I+EMI FPVVNE+CRVL+EGIVV+A+DLD A+++GM FP YRGG
Sbjct: 610 SGVSVDPMLVKLQEKDIIEMIFFPVVNEACRVLDEGIVVKAADLDIAAIMGMGFPPYRGG 669
Query: 664 IVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSA 709
I+FWAD++G+ Y+Y+ L+KWS+LYG FFKP +L RA KGIPL A
Sbjct: 670 IIFWADSLGSKYIYSRLEKWSELYGPFFKPCAYLAARAAKGIPLGA 715
>gi|34922417|sp|O49809.2|MFPA_BRANA RecName: Full=Glyoxysomal fatty acid beta-oxidation multifunctional
protein MFP-a; Includes: RecName: Full=Enoyl-CoA
hydratase/3-2-trans-enoyl-CoA
isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|2832898|emb|CAA04386.1| Tetrafunctional protein of glyoxysomal fatty acid beta-oxidation
[Brassica napus]
Length = 725
Score = 852 bits (2201), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/720 (58%), Positives = 547/720 (75%), Gaps = 7/720 (0%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
T+EVG DGVA+ITLINPPVN+L+ ++ LK +EEA SR+DVKAIV+TG G+FSGGF
Sbjct: 9 TTIEVGADGVAVITLINPPVNSLSFDVLYSLKSNYEEALSRNDVKAIVVTGAKGKFSGGF 68
Query: 66 DINVFQKVH-GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
DI+ F ++ G + +S++++ +L+E KKP VAA++GLALGGGLEL+M CHARI
Sbjct: 69 DISGFGEIQKGTMKEPKVGYISIDILTDLLEAAKKPSVAAIDGLALGGGLELSMACHARI 128
Query: 125 AAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVV 181
+AP QLGLPEL LGVIPG TQRLPRLVGL+KA+EM+L SK + +EEG LGLIDAVV
Sbjct: 129 SAPGAQLGLPELQLGVIPGFGGTQRLPRLVGLTKALEMILTSKPVKAEEGHSLGLIDAVV 188
Query: 182 TSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 241
ELL +R WALDIA RRKPW+ S+ +TDKL L EARE+LK A+ Q ++ APNM
Sbjct: 189 PPAELLNAARRWALDIAERRKPWVSSVLKTDKLPPLGEAREILKFAKDQTRRQAPNMKHP 248
Query: 242 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 301
CL+ +E GIV G +G+ KEA+V E++ LDT++GL+HVFF+QR T+KVP VTD GL
Sbjct: 249 LMCLEAVEVGIVSGSRAGLEKEAQVGSEVINLDTTKGLIHVFFSQRGTTKVPGVTDRGLV 308
Query: 302 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 361
PR + KVA+IGGGLMGSGIATA IL+N V+LKEVN ++L GI ++AN++ V +GK+
Sbjct: 309 PRKINKVAIIGGGLMGSGIATALILSNYSVILKEVNEKFLEAGIGRVKANLQSRVKKGKM 368
Query: 362 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 421
+++K + +LKG LDY F+DVDMVIEAVIE++ LKQ+IF++LEK CP HCILA+NTS
Sbjct: 369 SKEKFEKTMSLLKGSLDYESFRDVDMVIEAVIENISLKQQIFADLEKYCPQHCILASNTS 428
Query: 422 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 481
TIDLN +GE+T SQDRIIGAHFFSPAHVMPLLEIVRT TSAQVI+DL+ VGK I+K PV
Sbjct: 429 TIDLNKIGERTKSQDRIIGAHFFSPAHVMPLLEIVRTNHTSAQVIVDLLDVGKKIRKTPV 488
Query: 482 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAA 541
VVGNCTGFAVNR FFPY+Q+A LV G D + ID A+ FG+P+GPF+L DL G+GVA
Sbjct: 489 VVGNCTGFAVNRMFFPYTQAAMFLVEHGTDPYLIDKAVSKFGMPMGPFRLCDLVGFGVAI 548
Query: 542 ATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECR 601
AT+ +F + FP+R+++S ++ L+ + R G+A KG Y Y+ K KPDP + I++ R
Sbjct: 549 ATATQFIENFPERTYKSMIIPLMQEDKRAGEATRKGFYLYDDRRKAKPDPEIKNYIDKAR 608
Query: 602 RLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYR 661
+S P K ++EKEI+EM FPVVNE+CRV EGI V+A+DLD A + GM FP YR
Sbjct: 609 SVSGAKPDPKLEKLSEKEIIEMTFFPVVNEACRVFAEGIAVKAADLDIAGIFGMGFPPYR 668
Query: 662 GGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSAPVSSSSTSRARL 721
GGI+FWAD++G+ Y+Y+ L++WS+ YG FFKP FL ER +KG PLSAP+ SR+RL
Sbjct: 669 GGIMFWADSIGSKYIYSKLEEWSKAYGEFFKPCAFLAERGSKGAPLSAPLEQ---SRSRL 725
>gi|297829230|ref|XP_002882497.1| hypothetical protein ARALYDRAFT_478006 [Arabidopsis lyrata subsp.
lyrata]
gi|297328337|gb|EFH58756.1| hypothetical protein ARALYDRAFT_478006 [Arabidopsis lyrata subsp.
lyrata]
Length = 723
Score = 847 bits (2189), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/716 (59%), Positives = 543/716 (75%), Gaps = 6/716 (0%)
Query: 5 RVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGG 64
+ MEVG DGVA+ITLINPPVN+L+ ++ LK +EEA SR DVKAIV+TG GRFSGG
Sbjct: 8 KTVMEVGGDGVAVITLINPPVNSLSFDVLYNLKSNYEEALSRIDVKAIVITG--GRFSGG 65
Query: 65 FDINVFQKVH-GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
FDI+ F ++ G +S++++ +L+E +KP VAA++GLALGGGLELAM CHAR
Sbjct: 66 FDISGFGEMQKGTIKEPKAGYISIDIITDLLEAARKPSVAAIDGLALGGGLELAMACHAR 125
Query: 124 IAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAV 180
I+AP QLGLPEL LGVIPG TQRLPRLVGL+KA+EM+L SK + +EEG LGLIDAV
Sbjct: 126 ISAPAAQLGLPELQLGVIPGFGGTQRLPRLVGLTKALEMILTSKPVKAEEGHSLGLIDAV 185
Query: 181 VTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQ 240
+ ELL +R WALDI RRKPW+ S+ +TDKL SL EARE+LK AR Q +K APNM
Sbjct: 186 MPPAELLTTARRWALDIVERRKPWVSSVSKTDKLPSLGEAREILKFARGQTQKRAPNMKH 245
Query: 241 HQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGL 300
CLD IE GIV G +G+ KEA+V ++V LDT++ L+HVFF+QR T+KVP VTD GL
Sbjct: 246 PLMCLDAIEVGIVSGPRAGLEKEAEVASQVVKLDTTKSLIHVFFSQRGTAKVPGVTDRGL 305
Query: 301 KPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGK 360
PR ++KVA+IGGGLMGSGIATA IL+N V+LKEVN ++L GI ++AN++ V +G
Sbjct: 306 APRKIKKVAIIGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVKANLQSRVRKGS 365
Query: 361 LTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 420
++Q+K + +LKG LDY F+DVDMVIEAVIE++ LKQ+IF++LEK CP HCILA+NT
Sbjct: 366 MSQEKFEKTMSLLKGSLDYESFRDVDMVIEAVIENISLKQQIFADLEKYCPQHCILASNT 425
Query: 421 STIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVP 480
STIDLN +GE+T SQDRI+GAHFFSPAH+MPLLEIVRT TSAQVI+DL+ VGK IKK P
Sbjct: 426 STIDLNKIGERTKSQDRIVGAHFFSPAHIMPLLEIVRTNHTSAQVIVDLLDVGKKIKKTP 485
Query: 481 VVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVA 540
VVVGNCTGFAVNR FFPY+Q+A LV G D + ID AI FG+P+GPF+L DL G+GVA
Sbjct: 486 VVVGNCTGFAVNRMFFPYTQAAMFLVECGADPYLIDRAISKFGMPMGPFRLCDLVGFGVA 545
Query: 541 AATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEEC 600
AT+ +F + F +R+++S ++ L+ + R G+A KG Y Y+ K KPDP + IE+
Sbjct: 546 IATATQFIENFSERTYKSMIIPLMQEDKRAGEATRKGFYLYDDKRKAKPDPELKKYIEKA 605
Query: 601 RRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSY 660
R +S + K +++EKEI+EM FPVVNE+CRV EGI V+A+DLD A ++GM FP Y
Sbjct: 606 RSISGVKLDPKLANLSEKEIIEMTFFPVVNEACRVFAEGIAVKAADLDIAGIMGMGFPPY 665
Query: 661 RGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSAPVSSSST 716
RGGI+FWAD++G+ Y+Y+ L +WS+ YG FFKP FL ER +KG+PLSAPV +S+
Sbjct: 666 RGGIMFWADSIGSKYIYSRLDEWSKTYGEFFKPCAFLAERGSKGVPLSAPVKQASS 721
>gi|357135448|ref|XP_003569321.1| PREDICTED: glyoxysomal fatty acid beta-oxidation multifunctional
protein MFP-a-like [Brachypodium distachyon]
Length = 748
Score = 847 bits (2189), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/719 (55%), Positives = 542/719 (75%), Gaps = 11/719 (1%)
Query: 7 TMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFD 66
TMEV DGVA+IT+ NPPVNAL+ ++A + ++EA R+DVKAIVLTG GRF GGFD
Sbjct: 37 TMEVRGDGVAVITISNPPVNALSFDVLASFQRNYQEALRRNDVKAIVLTGAEGRFCGGFD 96
Query: 67 INVFQKVHGAGDVSLMP-DVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA 125
IN F G + P +S++ + +++ED KP VAA++G+ALGGGLE+AM CHARI+
Sbjct: 97 INAF----GNKPKNEKPGSLSIDFLTDIVEDAHKPSVAAIDGIALGGGLEVAMVCHARIS 152
Query: 126 APKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 182
P QLGLPEL LG+IPG TQRLPRLVG+SKA+EMML+SKSI E KLGL+DA+V+
Sbjct: 153 TPSAQLGLPELQLGIIPGMGGTQRLPRLVGMSKALEMMLMSKSIKGVEAHKLGLVDAIVS 212
Query: 183 SEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQ 242
+ EL+ + WAL+IA ++PW +SLHRTDKL L EA+E+LK++R++A+K A N+
Sbjct: 213 ANELVNTACSWALEIAEHKRPWFKSLHRTDKLPDLQEAKEILKISRVKAQKQAANLQHPL 272
Query: 243 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 302
C+DVIE G++ G +G++KE K L TS+ L HVFFAQRATSK+P VT++GL P
Sbjct: 273 VCIDVIEAGVLSGPRAGLMKEVVSGKMLEQSQTSKSLRHVFFAQRATSKIPEVTNLGLTP 332
Query: 303 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 362
R + K A++GGGLMGSGIATA +LNN++V+LKEVN ++L GI ++AN++ V RG++T
Sbjct: 333 RRILKAAIVGGGLMGSGIATALVLNNMFVILKEVNEKFLDAGINRVKANLQSFVKRGRMT 392
Query: 363 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 422
+D L +L GVLDY +F+D D+VIEAVIE + LKQKIFS+LE+ C +CI+ATNTST
Sbjct: 393 KDDYEKKLSLLSGVLDYEQFRDADVVIEAVIEDILLKQKIFSDLERYCHSNCIIATNTST 452
Query: 423 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 482
IDL ++G+KTS QDRIIGAHFFSPAHVMPLLEIVRT+ TS+QVI+DL+ + K I+K P+V
Sbjct: 453 IDLQLIGQKTSCQDRIIGAHFFSPAHVMPLLEIVRTQHTSSQVIVDLLDLAKKIRKTPIV 512
Query: 483 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAA 542
VGNCTGFAVNR FFPY Q A LLV G+DV+RID I FG+P+GPF+L DL G+GVA A
Sbjct: 513 VGNCTGFAVNRMFFPYGQVAGLLVDYGLDVYRIDHVITQFGMPMGPFRLADLVGFGVAVA 572
Query: 543 TSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRR 602
T K++ ++FP+R ++S L D++LK R G+++G+G Y Y+ K PDP + +E+ R
Sbjct: 573 TRKQYYQSFPERCYKSMLTDIMLKDKRTGESSGRGYYLYDDKRKASPDPDIQKYVEKSRN 632
Query: 603 LSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRG 662
++ + K + +T+ +IVEM+ FPVVNE+CRVL+EGI ++ASDLD AS++GM FPSYRG
Sbjct: 633 MAGVAKDPKVMKLTDSDIVEMVFFPVVNEACRVLDEGIALKASDLDVASIMGMGFPSYRG 692
Query: 663 GIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSAPVSSSSTSRARL 721
G++FWAD++GA YV+ L+ WS+ YG FF+P +L RA +G L ++++ +++RL
Sbjct: 693 GVMFWADSLGAEYVFKRLEAWSKDYGEFFRPCEYLAARARQGASL---IATADGAKSRL 748
>gi|115436430|ref|NP_001042973.1| Os01g0348600 [Oryza sativa Japonica Group]
gi|15290204|dbj|BAB63893.1| putative tetrafunctional protein of glyoxysomal fatty acid
beta-oxidation [Oryza sativa Japonica Group]
gi|21104813|dbj|BAB93398.1| putative tetrafunctional protein of glyoxysomal fatty acid
beta-oxidation [Oryza sativa Japonica Group]
gi|113532504|dbj|BAF04887.1| Os01g0348600 [Oryza sativa Japonica Group]
gi|125570288|gb|EAZ11803.1| hypothetical protein OsJ_01677 [Oryza sativa Japonica Group]
gi|215713473|dbj|BAG94610.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218188166|gb|EEC70593.1| hypothetical protein OsI_01815 [Oryza sativa Indica Group]
Length = 727
Score = 844 bits (2181), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/723 (58%), Positives = 554/723 (76%), Gaps = 11/723 (1%)
Query: 5 RVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGG 64
R MEVG DGVA+IT+ NPPVN+L+I ++ LK+ + EA R+DVKAIV+TG GG+FSGG
Sbjct: 10 RTEMEVGADGVAVITICNPPVNSLSIDVLLSLKENYAEALRRNDVKAIVVTGKGGKFSGG 69
Query: 65 FDINVFQKVHGAGDVSLMPDV---SVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCH 121
FDI+ F V G G V P V S++++ + +E KP VAA++GLALGGGLE+AM CH
Sbjct: 70 FDISSFGSVQG-GKVE-QPKVGYISIDIITDTLEAATKPSVAAIDGLALGGGLEVAMACH 127
Query: 122 ARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
ARI+ P QLGLPEL LGVIPG TQRLPRLVGL+KA+EMMLLSK I E +LGL+D
Sbjct: 128 ARISTPTAQLGLPELQLGVIPGFGGTQRLPRLVGLTKALEMMLLSKPIKGAEAHQLGLVD 187
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 238
++V++++L+ +R WALDI ++PWI+SL++TDKL L EARE+LK AR QA++ A N+
Sbjct: 188 SLVSADDLVNTARRWALDICELKRPWIKSLYKTDKLEPLGEAREILKFARAQARRQAANL 247
Query: 239 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDI 298
C+DVIEEGIV G +G+ KEA F+ L+ DT + LVHVFF+QRATSKVP TD+
Sbjct: 248 EHPLVCIDVIEEGIVSGPRAGLWKEANAFQGLLFADTCKNLVHVFFSQRATSKVPGATDL 307
Query: 299 GLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTR 358
GL PR V KVA++GGGLMGSGIATA IL+N V+LKEVN ++L GI I+AN++ V +
Sbjct: 308 GLMPRKVTKVAILGGGLMGSGIATAMILSNYPVILKEVNEKFLNAGIDRIKANLQSRVRK 367
Query: 359 GKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 418
GK+T+++ A+ ++ GVLDY FKDVD+VIEAVIE+V LKQ+IFS+LEK CP HC+LAT
Sbjct: 368 GKMTEERYEKAMSLVTGVLDYERFKDVDLVIEAVIENVKLKQQIFSDLEKYCPSHCVLAT 427
Query: 419 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKK 478
NTSTIDLN++GEKT S+DRI+GAHFFSPAHVMPLLEIVRT+ TS QV++DL+ VGK IKK
Sbjct: 428 NTSTIDLNLIGEKTRSKDRIVGAHFFSPAHVMPLLEIVRTQHTSPQVVVDLLDVGKKIKK 487
Query: 479 VPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYG 538
P+VVGNCTGFAVNR FFPY+QSA L V LG+DV++ID A FG+P+GPF+L DL G+G
Sbjct: 488 TPIVVGNCTGFAVNRMFFPYTQSALLFVDLGMDVYKIDRACTKFGMPMGPFRLADLVGFG 547
Query: 539 VAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIE 598
VAAAT ++ + FP+R ++S L+ L+++ R G+A+ KG Y YE K PDP ++ IE
Sbjct: 548 VAAATGMQYLENFPERVYKSMLIPLMMEDKRTGEASRKGFYKYEDKRKATPDPEIMKYIE 607
Query: 599 ECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFP 658
+ R ++ + P + + ++EK+IVEM+ FPV+NE+CRVL+EGI V+ASDLD AS+ GM FP
Sbjct: 608 KSRSMAGVTPDTELMKLSEKDIVEMVFFPVINEACRVLDEGIAVKASDLDIASIFGMGFP 667
Query: 659 SYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSAPVSSSSTSR 718
YRGGI+FWAD++GA Y++ L+ W++ Y + FKP +L ERA G+PLSAP + +
Sbjct: 668 PYRGGIMFWADSIGAKYIHDKLEVWAKRYSDIFKPCSYLAERAANGVPLSAP---AKQVK 724
Query: 719 ARL 721
ARL
Sbjct: 725 ARL 727
>gi|15231317|ref|NP_187342.1| enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Arabidopsis
thaliana]
gi|75267758|sp|Q9ZPI5.1|MFP2_ARATH RecName: Full=Peroxisomal fatty acid beta-oxidation multifunctional
protein MFP2; Short=AtMPF2; Includes: RecName:
Full=Enoyl-CoA hydratase/3-2-trans-enoyl-CoA
isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|295982056|pdb|2WTB|A Chain A, Arabidopsis Thaliana Multifuctional Protein, Mfp2
gi|6728993|gb|AAF26990.1|AC016827_1 fatty acid multifunctional protein (AtMFP2) [Arabidopsis thaliana]
gi|4337027|gb|AAD18042.1| MFP2 [Arabidopsis thaliana]
gi|17065090|gb|AAL32699.1| fatty acid multifunctional protein (AtMFP2) [Arabidopsis thaliana]
gi|332640947|gb|AEE74468.1| enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Arabidopsis
thaliana]
Length = 725
Score = 843 bits (2179), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/718 (58%), Positives = 544/718 (75%), Gaps = 8/718 (1%)
Query: 5 RVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGG 64
+ MEVG DGVA+ITLINPPVN+L+ ++ LK +EEA SR+DVKAIV+TG GRFSGG
Sbjct: 8 KTVMEVGGDGVAVITLINPPVNSLSFDVLYNLKSNYEEALSRNDVKAIVITGAKGRFSGG 67
Query: 65 FDINVFQKVHGAGDVSLMPD---VSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCH 121
FDI+ F ++ G+V P +S++++ +L+E +KP VAA++GLALGGGLELAM CH
Sbjct: 68 FDISGFGEMQ-KGNVK-EPKAGYISIDIITDLLEAARKPSVAAIDGLALGGGLELAMACH 125
Query: 122 ARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
ARI+AP QLGLPEL LGVIPG TQRLPRLVGL+KA+EM+L SK + +EEG LGLID
Sbjct: 126 ARISAPAAQLGLPELQLGVIPGFGGTQRLPRLVGLTKALEMILTSKPVKAEEGHSLGLID 185
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 238
AVV EL+ +R WALDI RRKPW+ S+ +TDKL L EARE+L A+ Q K APNM
Sbjct: 186 AVVPPAELVTTARRWALDIVGRRKPWVSSVSKTDKLPPLGEAREILTFAKAQTLKRAPNM 245
Query: 239 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDI 298
CLD IE GIV G +G+ KEA+V ++V LDT++GL+HVFF+QR T+KVP VTD
Sbjct: 246 KHPLMCLDAIEVGIVSGPRAGLEKEAEVASQVVKLDTTKGLIHVFFSQRGTAKVPGVTDR 305
Query: 299 GLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTR 358
GL PR ++KVA+IGGGLMGSGIATA IL+N V+LKEVN ++L GI ++AN++ V +
Sbjct: 306 GLVPRKIKKVAIIGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVKANLQSRVRK 365
Query: 359 GKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 418
G ++Q+K + +LKG LDY F+DVDMVIEAVIE++ LKQ+IF++LEK CP HCILA+
Sbjct: 366 GSMSQEKFEKTMSLLKGSLDYESFRDVDMVIEAVIENISLKQQIFADLEKYCPQHCILAS 425
Query: 419 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKK 478
NTSTIDLN +GE+T SQDRI+GAHFFSPAH+MPLLEIVRT TSAQVI+DL+ VGK IKK
Sbjct: 426 NTSTIDLNKIGERTKSQDRIVGAHFFSPAHIMPLLEIVRTNHTSAQVIVDLLDVGKKIKK 485
Query: 479 VPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYG 538
PVVVGNCTGFAVNR FFPY+Q+A LV G D + ID AI FG+P+GPF+L DL G+G
Sbjct: 486 TPVVVGNCTGFAVNRMFFPYTQAAMFLVECGADPYLIDRAISKFGMPMGPFRLCDLVGFG 545
Query: 539 VAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIE 598
VA AT+ +F + F +R+++S ++ L+ + R G+A KG Y Y+ K KPDP + IE
Sbjct: 546 VAIATATQFIENFSERTYKSMIIPLMQEDKRAGEATRKGFYLYDDKRKAKPDPELKKYIE 605
Query: 599 ECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFP 658
+ R +S + K +++EK+I+EM FPVVNE+CRV EGI V+A+DLD A ++GM FP
Sbjct: 606 KARSISGVKLDPKLANLSEKDIIEMTFFPVVNEACRVFAEGIAVKAADLDIAGIMGMGFP 665
Query: 659 SYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSAPVSSSST 716
YRGGI+FWAD++G+ Y+Y+ L +WS+ YG FFKP FL ER +KG+ LSAPV +S+
Sbjct: 666 PYRGGIMFWADSIGSKYIYSRLDEWSKAYGEFFKPCAFLAERGSKGVLLSAPVKQASS 723
>gi|224033651|gb|ACN35901.1| unknown [Zea mays]
gi|413948034|gb|AFW80683.1| glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a
[Zea mays]
Length = 723
Score = 842 bits (2176), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/728 (57%), Positives = 555/728 (76%), Gaps = 12/728 (1%)
Query: 1 MAAP-RVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGG 59
MAA R ++VG DGVA+IT+ NPPVN+L+I ++ LK+ +EEA R+DVKAIV+TG GG
Sbjct: 1 MAAKVRTELDVGADGVAVITIYNPPVNSLSIDVLHSLKESYEEALRRNDVKAIVVTGKGG 60
Query: 60 RFSGGFDINVFQKVHGAGDVSLMPDV---SVELVVNLIEDCKKPIVAAVEGLALGGGLEL 116
+FSGGFDI+ F V G ++ P V +++++ + +E KP VAA++GLALGGGLE+
Sbjct: 61 KFSGGFDISSFGGVQGGQ--TMQPKVGYIAIDILTDTVEAATKPSVAAIDGLALGGGLEV 118
Query: 117 AMGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWK 173
AM CHARIA P QLGLPEL LG+IPG TQRLPRLVGL+K++EMMLLSK I E +
Sbjct: 119 AMACHARIATPTAQLGLPELQLGIIPGFGGTQRLPRLVGLTKSLEMMLLSKPIKGGEAHQ 178
Query: 174 LGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKK 233
LGL+DA+V+ +L+ +R WALDI R+PWI+SL++TDKL L EARE+LK AR QA+K
Sbjct: 179 LGLVDALVSPNDLVNTARQWALDIYECRRPWIKSLYKTDKLEPLGEAREILKFARAQAQK 238
Query: 234 TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 293
A N+ C+DVIEEGIV G +G+ KEA F+EL+ DT + LVHVFF+QRATSK+P
Sbjct: 239 QAANLHHPLVCIDVIEEGIVAGPRAGLWKEATSFQELLFSDTCKSLVHVFFSQRATSKIP 298
Query: 294 NVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVR 353
TD+GL PR + KVA++GGGLMGSGIATA +L+N V+LKEVN ++L GI I+AN++
Sbjct: 299 GATDLGLMPRKITKVAILGGGLMGSGIATAMVLSNYPVLLKEVNEKFLTAGINRIQANLQ 358
Query: 354 GLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPH 413
V +GK+T+++ A+ ++ GVLDY FKDVD+VIEAVIE+V LKQ+IFS+LEK CP H
Sbjct: 359 SRVKKGKMTEERYEKAMSLVTGVLDYERFKDVDLVIEAVIENVKLKQQIFSDLEKYCPSH 418
Query: 414 CILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVG 473
CILATNTSTIDLN++GEKT +QDRI GAHFFSPAHVMPLLEIVRT+ TS QV++DL+ VG
Sbjct: 419 CILATNTSTIDLNLIGEKTKAQDRIAGAHFFSPAHVMPLLEIVRTQHTSPQVVVDLLDVG 478
Query: 474 KIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLD 533
K IKK P+VVGNCTGFAVNR FFPY+QSA V LG+DV++ID A FG+P+GPF+L D
Sbjct: 479 KKIKKTPIVVGNCTGFAVNRMFFPYTQSALFYVDLGMDVYKIDRACTKFGMPMGPFRLAD 538
Query: 534 LAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSV 593
L G+GVA AT ++ + FP+R ++S L+ L+++ R G+A KG Y YE K PDP +
Sbjct: 539 LVGFGVAVATGMQYLENFPERVYKSMLLPLMMEGNRAGEATQKGFYKYEGKRKATPDPEI 598
Query: 594 LPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVL 653
+ IE+ R ++ + P + + ++EK+IVEM+ FPV+NE+CRVL+EGI V+ASDLD AS+
Sbjct: 599 MKYIEKSRSMAGVTPDPELMKLSEKDIVEMVFFPVINEACRVLDEGIAVKASDLDIASIF 658
Query: 654 GMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSAPVSS 713
GM FP YRGG++ WAD++GA Y++ L++W++ YG FFKP +L ERA KGIPLSAP
Sbjct: 659 GMGFPPYRGGVMHWADSIGAKYIHGKLEEWTKRYGGFFKPCSYLAERAAKGIPLSAP--- 715
Query: 714 SSTSRARL 721
+ +ARL
Sbjct: 716 TKKVQARL 723
>gi|226506006|ref|NP_001152306.1| glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a
[Zea mays]
gi|195654913|gb|ACG46924.1| glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a
[Zea mays]
Length = 723
Score = 841 bits (2173), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/715 (58%), Positives = 547/715 (76%), Gaps = 8/715 (1%)
Query: 2 AAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRF 61
A R ++VG DGVA+IT+ NPPVN+L+I ++ LK+ +EEA R+DVKAIV+TG GG+F
Sbjct: 3 AKGRTELDVGADGVAVITIYNPPVNSLSIDVLHSLKESYEEALRRNDVKAIVVTGKGGKF 62
Query: 62 SGGFDINVFQKVHGAGDVSLMPDV---SVELVVNLIEDCKKPIVAAVEGLALGGGLELAM 118
SGGFDI+ F V G ++ P V +++++ + +E KP VAA++GLALGGGLE+AM
Sbjct: 63 SGGFDISSFGGVQGGQ--TMQPKVGYIAIDILTDTVEAATKPSVAAIDGLALGGGLEVAM 120
Query: 119 GCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLG 175
CHARIA P QLGLPEL LG+IPG TQRLPRLVGL+K++EMMLLSK I E +LG
Sbjct: 121 ACHARIATPTAQLGLPELQLGIIPGFGGTQRLPRLVGLTKSLEMMLLSKPIKGGEAHQLG 180
Query: 176 LIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTA 235
L+DA+V+ +L+ +R WALDI R+PWI+SL++TDKL L EARE+LK AR QA+K A
Sbjct: 181 LVDALVSPNDLVNTARQWALDIYECRRPWIKSLYKTDKLEPLGEAREILKFARAQAQKQA 240
Query: 236 PNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV 295
N+ C+DVIEEGIV G +G+ KEA F+EL+ DT + LVHVFF+QRATSK+P
Sbjct: 241 ANLHHPLVCIDVIEEGIVAGPRAGLWKEATSFQELLFSDTCKSLVHVFFSQRATSKIPGA 300
Query: 296 TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGL 355
TD+GL PR + KVA++GGGLMGSGIATA +L+N V+LKEVN ++L GI I+AN++
Sbjct: 301 TDLGLMPRKITKVAILGGGLMGSGIATAMVLSNYPVLLKEVNEKFLTAGINRIQANLQSR 360
Query: 356 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCI 415
V +GK+T ++ A+ ++ GVLDY FKDVD+VIEAVIE+V LKQ+IFS+LEK CP HCI
Sbjct: 361 VRKGKMTDERYEKAMSLVTGVLDYERFKDVDLVIEAVIENVKLKQQIFSDLEKYCPSHCI 420
Query: 416 LATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKI 475
LATNTSTIDLN++GEKT +QDRI GAHFFSPAHVMPLLEIVRT+ TS QV++DL+ VGK
Sbjct: 421 LATNTSTIDLNLIGEKTKAQDRIAGAHFFSPAHVMPLLEIVRTQHTSPQVVVDLLDVGKK 480
Query: 476 IKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLA 535
IKK P+VVGNCTGFAVNR FFPY+QSA V LG+DV++ID A FG+P+GPF+L DL
Sbjct: 481 IKKTPIVVGNCTGFAVNRMFFPYTQSALFYVDLGMDVYKIDRACTKFGMPMGPFRLADLV 540
Query: 536 GYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLP 595
G+GVA AT ++ + FP+R ++S L+ L+++ R G+A KG Y YE K PDP ++
Sbjct: 541 GFGVAVATGMQYLENFPERVYKSMLLPLMMEDNRAGEATQKGFYKYEGKRKATPDPEIMK 600
Query: 596 IIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGM 655
IE+ R ++ + P + + ++EK+IVEM+ FPV+NE+CRVL+EGI V+ASDLD AS+ GM
Sbjct: 601 YIEKSRSMAGVTPDPELMKLSEKDIVEMVFFPVINEACRVLDEGIAVKASDLDIASIFGM 660
Query: 656 SFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSAP 710
FP YRGG++ WAD++GA Y++ L++W++ YG FFKP +L ERA KGIPLSAP
Sbjct: 661 GFPPYRGGVMHWADSIGAKYIHGKLEEWTKRYGGFFKPCSYLAERAAKGIPLSAP 715
>gi|326499728|dbj|BAJ86175.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 761
Score = 838 bits (2164), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/723 (57%), Positives = 553/723 (76%), Gaps = 5/723 (0%)
Query: 1 MAAPRVT-MEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGG 59
MAA T MEVG DGVA+IT+ NPPVN+L+I ++ LK+ +EEA R DVKAIV+TG GG
Sbjct: 38 MAAKGTTEMEVGGDGVAVITICNPPVNSLSIDVLLSLKESYEEALQRKDVKAIVVTGKGG 97
Query: 60 RFSGGFDINVFQKVH-GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAM 118
+FSGGFDI+ F +H G + + +S++++ L+E KP VAA++GL LGGGLE++M
Sbjct: 98 KFSGGFDISSFGDLHSGKIEQPKVGYISIDILTELLEGATKPSVAAIDGLCLGGGLEVSM 157
Query: 119 GCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLG 175
CHARI+ P QLGLPEL LG+IPG TQRLPRLVGL+K++EMMLLSK I EE +LG
Sbjct: 158 ACHARISTPTAQLGLPELQLGIIPGFGGTQRLPRLVGLTKSLEMMLLSKPIKGEEAHQLG 217
Query: 176 LIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTA 235
L+DA+V+ +L+ +R ALDI RKPWI+SL++TDKL L EARE+LK AR QA+K A
Sbjct: 218 LVDALVSPNDLVNTARRLALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQA 277
Query: 236 PNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV 295
N+ C+DVIEEGIV G +G+ KEA F+ L+ DT + L+HVFF+QRATSKVP
Sbjct: 278 ANLEHPLICIDVIEEGIVSGPRAGLWKEANAFQGLLFSDTCKSLLHVFFSQRATSKVPGA 337
Query: 296 TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGL 355
TD+GL PR + KVA++GGGLMGSGIATA IL+N V+LKEVN ++L GI I+AN++
Sbjct: 338 TDLGLMPRKIMKVAILGGGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSR 397
Query: 356 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCI 415
V +GK+T+++ AL +L G L Y +FK+VD+VIEAVIE+V LKQ+IF++LEK CP HCI
Sbjct: 398 VRKGKMTEERYEKALSLLSGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCI 457
Query: 416 LATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKI 475
LATNTSTIDLN++GEKT SQDRI+GAHFFSPAHVMPLLEIVRT+ TSAQV++DL+ VGK
Sbjct: 458 LATNTSTIDLNLIGEKTKSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKR 517
Query: 476 IKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLA 535
IKK P+VVGNCTGFAVNR FFPY+QSA L V G+DV++ID A FG+P+GPF+L DL
Sbjct: 518 IKKTPIVVGNCTGFAVNRMFFPYTQSALLFVDYGLDVYKIDRACTKFGMPMGPFRLADLV 577
Query: 536 GYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLP 595
G+GVA AT ++ + FPDR ++S L+ ++++ R G+A+ KG Y YE K PDP ++
Sbjct: 578 GFGVAVATGMQYLENFPDRVYKSMLIPIMMEDKRAGEASRKGFYKYEDKRKATPDPEIMT 637
Query: 596 IIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGM 655
I++ R ++ + P + + +++K+IVEM+ FPV+NE+CRVL+EGI V+ASDLD AS+ GM
Sbjct: 638 YIQKSRSMAGVTPDAELMKLSDKDIVEMVFFPVINEACRVLDEGIAVKASDLDIASIFGM 697
Query: 656 SFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSAPVSSSS 715
FP YRGG++ W D++GA Y++ L++W++ YG+FF+P +L ERA KGIPLSAP +S
Sbjct: 698 GFPPYRGGVMLWGDSIGAKYIHEKLQQWAKRYGSFFEPCSYLAERAAKGIPLSAPAASQV 757
Query: 716 TSR 718
+R
Sbjct: 758 KAR 760
>gi|357158051|ref|XP_003578000.1| PREDICTED: glyoxysomal fatty acid beta-oxidation multifunctional
protein MFP-a-like [Brachypodium distachyon]
Length = 723
Score = 836 bits (2159), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/724 (57%), Positives = 551/724 (76%), Gaps = 7/724 (0%)
Query: 2 AAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRF 61
A R MEVG DGVA+IT+ NPPVN+L+I ++ LK+ +EEA R DVKAIV+TG GG+F
Sbjct: 3 AKGRTEMEVGADGVAVITICNPPVNSLSIDVLLSLKESYEEALQRKDVKAIVVTGKGGKF 62
Query: 62 SGGFDINVFQKVHGAG-DVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
SGGFDI F + G + + +S++++ ++E KP VAA++GLALGGGLE+AM C
Sbjct: 63 SGGFDITSFGDLQGGKMEQPKVGYISIDILTEILEGATKPSVAAIDGLALGGGLEVAMAC 122
Query: 121 HARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 177
HARI+ P QLGLPEL LG+IPG TQRLPRLVGL+K++EM+LLSK I EE ++ GL+
Sbjct: 123 HARISTPTAQLGLPELQLGIIPGFGGTQRLPRLVGLTKSLEMILLSKPIKGEEAYQQGLV 182
Query: 178 DAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 237
D++V+ +L+ +R WALDI R+PWI+SL++TDKL L EARE+LK AR QA+K A N
Sbjct: 183 DSLVSPNDLVNAARRWALDICELRRPWIKSLYKTDKLEPLGEAREILKFARAQARKQAAN 242
Query: 238 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 297
+ C+DVIEEGIV G +G+ KEA F+ L+ DT + LVHVFF+QRATSKVP TD
Sbjct: 243 LEHPLLCIDVIEEGIVSGPRAGLWKEATTFQVLLFSDTCKSLVHVFFSQRATSKVPGATD 302
Query: 298 IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 357
+GL PR + KVA++GGGLMGSGIATA IL+N V+LKEVN ++L GI I+AN++ V
Sbjct: 303 LGLMPRKITKVAILGGGLMGSGIATAMILSNYPVILKEVNEKFLNAGIDRIKANLQSRVR 362
Query: 358 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 417
+GK+T+++ AL ++ G L Y FK+VD+VIEAVIE+V LKQ+IF++LEK CP HCILA
Sbjct: 363 KGKMTEERYEKALSLVTGALGYENFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILA 422
Query: 418 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 477
TNTSTIDLN++GEKT SQDRI+GAHFFSPAHVMPLLEIVRT+ TSAQV++DL+ VGK IK
Sbjct: 423 TNTSTIDLNLIGEKTKSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIK 482
Query: 478 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGY 537
K P+VVGNCTGFAVNR FFPY+QSA L V G+DV++ID A FG+P+GPF+L DL G+
Sbjct: 483 KTPIVVGNCTGFAVNRMFFPYTQSALLFVDYGMDVYKIDRACTKFGMPMGPFRLADLVGF 542
Query: 538 GVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPII 597
GVA AT ++ + FP+R ++S L+ L+++ R G+A GKG Y YE K PDP ++ I
Sbjct: 543 GVAVATGIQYLENFPERVYKSMLIPLMMEDKRAGEATGKGFYKYEGKRKSTPDPDIMTYI 602
Query: 598 EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSF 657
++ R ++ + P + + +++K+IVEM+ FPV+NE+CRVL+EGI V+ASDLD AS+ GM F
Sbjct: 603 QKSRSMAGVTPDPELMKLSDKDIVEMVFFPVINEACRVLDEGIAVKASDLDIASIFGMGF 662
Query: 658 PSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSAPVSSSSTS 717
P YRGG++ W D++GA Y++ L+ W++ YG+FF+P +L ERA KGIPLSAPV+
Sbjct: 663 PPYRGGVMLWGDSIGAKYIHGKLQGWAKRYGSFFEPCSYLAERAAKGIPLSAPVNQ---V 719
Query: 718 RARL 721
+ARL
Sbjct: 720 KARL 723
>gi|168042293|ref|XP_001773623.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675011|gb|EDQ61511.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 732
Score = 829 bits (2142), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/724 (58%), Positives = 546/724 (75%), Gaps = 15/724 (2%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
V M+VG D VA+IT+ NPPVN+LAIP + LK+++ EA +RDDVKAIV+TG G+FSGGF
Sbjct: 5 VKMDVGADAVAVITIDNPPVNSLAIPALIALKERYNEANARDDVKAIVVTGANGKFSGGF 64
Query: 66 DINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA 125
DI+VF K+ G + SV+L++ IE+ KP VAAV GLALGGGLELAM CHARIA
Sbjct: 65 DISVFPKLQEGGSNGYLNQASVDLMIETIEEASKPTVAAVPGLALGGGLELAMSCHARIA 124
Query: 126 APKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMML------------LSKSITSEE 170
PK QLGLPEL LG++PG TQRLPRLVGL+KA+EMML LSK I SEE
Sbjct: 125 TPKAQLGLPELQLGILPGFGGTQRLPRLVGLTKALEMMLAICVGCQPNGLQLSKPIASEE 184
Query: 171 GWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQ 230
G KLGL+D +V E+LL ++R WALDIA ++P + SL RTDKL SL +ARE++K AR Q
Sbjct: 185 GKKLGLVDEIVAPEDLLTIARRWALDIALGKRPRLSSLQRTDKLESLGDAREIIKFARAQ 244
Query: 231 AKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATS 290
KKTAPN+ CLD +EEG+V GGY G LKEA++F V+ D ++GLV++FFA RATS
Sbjct: 245 VKKTAPNLTHPLLCLDAVEEGVVAGGYRGALKEAELFAATVVSDNAKGLVNLFFAIRATS 304
Query: 291 KVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEA 350
KVP + ++GLKPR ++KVAV+GGGLMGSGI TA IL+ V+LKE+N ++L G++ I+A
Sbjct: 305 KVPGIVELGLKPRKIKKVAVVGGGLMGSGIVTALILSGYSVLLKEINDKFLQAGLERIKA 364
Query: 351 NVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKAC 410
N++ V +GK++++K L ++ GVL Y +FK VD+VIEAVIE++ LKQ IF +LEK C
Sbjct: 365 NLQSRVKKGKMSREKFETILSLVTGVLTYEDFKSVDVVIEAVIENIDLKQSIFVDLEKNC 424
Query: 411 PPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLM 470
CIL+TNTSTIDLN++G KT SQDRIIGAHFFSPAH+MPLLEIVRT++TS QVI+DLM
Sbjct: 425 RTDCILSTNTSTIDLNVLGAKTRSQDRIIGAHFFSPAHIMPLLEIVRTDKTSPQVIVDLM 484
Query: 471 TVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 530
+GK IKK V+VGNCTGFAVNR FFPY+ +A +L LGVD++RID+AI+S+G+P+GPF+
Sbjct: 485 ALGKAIKKTTVLVGNCTGFAVNRVFFPYTMAAMMLSDLGVDIYRIDNAIKSWGMPMGPFR 544
Query: 531 LLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPD 590
L DL G+GV A + +F DR + S LV +L+S R G+ NGKG Y Y++ K +P
Sbjct: 545 LTDLVGFGVGVAVGTQVVNSFSDRVYISRLVPKMLQSQRLGEQNGKGFYIYDEKRKARPA 604
Query: 591 PSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDA 650
P + II+E + + IM GKP+ +T+K+IVEM++FPVVNE+CRVL E IVV+ASDLD A
Sbjct: 605 PEIKDIIKESQEEAGIMLDGKPLELTDKDIVEMVMFPVVNEACRVLAEKIVVQASDLDIA 664
Query: 651 SVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSAP 710
SV GM FP YRGGIV WAD +GA Y+ + L W++ +G+FFKP FLEERA+ G+ LS P
Sbjct: 665 SVFGMGFPPYRGGIVCWADIIGAKYIASRLNTWTKAHGDFFKPCAFLEERASSGVKLSVP 724
Query: 711 VSSS 714
+ +S
Sbjct: 725 IRNS 728
>gi|242087635|ref|XP_002439650.1| hypothetical protein SORBIDRAFT_09g017970 [Sorghum bicolor]
gi|241944935|gb|EES18080.1| hypothetical protein SORBIDRAFT_09g017970 [Sorghum bicolor]
Length = 718
Score = 826 bits (2133), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/714 (56%), Positives = 524/714 (73%), Gaps = 6/714 (0%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR 60
MA TMEV DGVA+IT+ NPPVNAL++ ++A L+ + EA SR+D+KAIVLTG GR
Sbjct: 1 MARGTTTMEVRADGVAVITISNPPVNALSLDVIASLQRNYTEALSRNDIKAIVLTGAKGR 60
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
F GGFDI+ F K M S++ + +++ED KP VAA++G+ALGGGLELAM C
Sbjct: 61 FCGGFDISAFGKKPKNEKPGSM---SIDFLTDIVEDAHKPSVAAIDGIALGGGLELAMVC 117
Query: 121 HARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 177
HARI+ P QLGLPEL LG+IPG TQRLPRLVGL KAIEMML+SK+I +LGL+
Sbjct: 118 HARISTPSAQLGLPELQLGIIPGLGGTQRLPRLVGLPKAIEMMLMSKTIKGMGAQELGLV 177
Query: 178 DAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 237
DAV ++ EL+ + WAL+I ++KPW RSLHRTDKL L+E ++VLK AR+QAK N
Sbjct: 178 DAVTSANELVNAACSWALEIVEKKKPWFRSLHRTDKLPDLAEVKDVLKFARVQAKMKGAN 237
Query: 238 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 297
+ C+DVIEEGIV G +G++KE K L TS+ L H FFAQRATSK+PN+T+
Sbjct: 238 VQHPIVCIDVIEEGIVSGPRAGLMKETLSGKMLEQSQTSKSLRHFFFAQRATSKIPNITN 297
Query: 298 IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 357
+GL R ++K A+IGGGLMGSGIAT ILNN VVLKEVN E+L GI I+AN++ V
Sbjct: 298 MGLTARKIKKAAIIGGGLMGSGIATILILNNFSVVLKEVNEEFLSTGINRIKANLQSFVK 357
Query: 358 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 417
+G+L + L +L GVLDY +F+D D+VIEAVIE + LKQ+IFS+LEK C +CI A
Sbjct: 358 KGQLAIEDYKKKLSLLCGVLDYEQFRDTDVVIEAVIEDMFLKQQIFSDLEKYCHHNCIFA 417
Query: 418 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 477
TNTSTIDLNI+GEKT+SQDRI+GAHFFSPAHVMPLLEIV T TS+QVI+DL+ + K I+
Sbjct: 418 TNTSTIDLNIIGEKTASQDRIVGAHFFSPAHVMPLLEIVCTHHTSSQVIVDLLDLAKKIQ 477
Query: 478 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGY 537
K P+VVGNCTGFAVNR FFPY+Q+A LV G+DV+ D I FG+P+GPF+L DL G+
Sbjct: 478 KTPIVVGNCTGFAVNRMFFPYAQAACFLVDHGLDVYHTDHVITQFGMPMGPFRLADLVGF 537
Query: 538 GVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPII 597
GVA AT K++ +++P R ++S ++ +L++ R G+++ KG Y Y+ K DP + I
Sbjct: 538 GVAIATRKQYYQSYPGRCYKSMILQILVEDNRTGESSRKGFYVYDNKRKASRDPDLGKYI 597
Query: 598 EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSF 657
E+ R ++ +M K + +T+ +IVEMI FPVVNE+CRVL+EGI ++ASDLD AS++GM F
Sbjct: 598 EKSRNMAGVMQDPKLMKLTDNDIVEMIFFPVVNEACRVLDEGIALKASDLDVASIMGMGF 657
Query: 658 PSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSAPV 711
PSYRGG++FWAD++GA YVY L WS+ YG FF+P +L RA +G+ L+A V
Sbjct: 658 PSYRGGLMFWADSLGAKYVYDRLDAWSKDYGEFFRPCEYLAVRARQGVSLAAKV 711
>gi|218196641|gb|EEC79068.1| hypothetical protein OsI_19644 [Oryza sativa Indica Group]
Length = 718
Score = 821 bits (2121), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/712 (54%), Positives = 530/712 (74%), Gaps = 6/712 (0%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR 60
MA ++EV DGVA+IT+ NPPVNAL++ ++A L+ + EA R DVKAIVLTG GR
Sbjct: 1 MARGSTSVEVRRDGVAVITVSNPPVNALSLDVIASLQRDYGEALRRSDVKAIVLTGAKGR 60
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
FSGGFDIN F K + S++ + +++ED KP VAA++G+ALGGGLELAM C
Sbjct: 61 FSGGFDINAFDKKPKNEKPGYL---SIDFLTDIVEDAPKPSVAAIDGVALGGGLELAMVC 117
Query: 121 HARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 177
HAR++ QLGLPEL LG+IPG TQRLPRLVGL KA+EM+L+SK + E K GL+
Sbjct: 118 HARVSTSSVQLGLPELQLGIIPGLGGTQRLPRLVGLPKALEMLLMSKPLKGVEAHKFGLV 177
Query: 178 DAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 237
DAVV+++EL+ + WAL+I ++PW RSLHRTD+L +L E +++L AR+QA+K + +
Sbjct: 178 DAVVSADELISTACSWALEIVEDKRPWFRSLHRTDRLPALEETKKILNFARVQAQKQSAS 237
Query: 238 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 297
+ C+DVIEEGI+ G +G++KE K L M S+ L HVFFAQRATSK+PN+++
Sbjct: 238 LQHPLVCIDVIEEGIISGPRAGLMKETLCGKMLEMSQISKSLRHVFFAQRATSKIPNISN 297
Query: 298 IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 357
+GL PR + KVA++GGGLMGSGIATA I NN+ V+LKEVN ++L GI ++AN++ LV
Sbjct: 298 LGLTPRRIHKVAIVGGGLMGSGIATALISNNLLVILKEVNEQFLDAGISRVKANLQSLVK 357
Query: 358 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 417
RG++T++ N L +L GVLDY +F++ D+VIEAVIE + LKQKIF++LEK C +CILA
Sbjct: 358 RGQMTKEDYENKLSLLSGVLDYEQFREADVVIEAVIEDLSLKQKIFADLEKYCHSNCILA 417
Query: 418 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 477
TNTSTIDL+++G+KTS QDRI GAHFFSPAH MPLLEI+RT RTS+QV++DL+ V K I+
Sbjct: 418 TNTSTIDLHLIGQKTSCQDRIAGAHFFSPAHAMPLLEIIRTHRTSSQVVIDLLNVAKQIR 477
Query: 478 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGY 537
K P+VVGNCTGFAVNR FFP++Q A LV G+DV+ ID I FG+P+GPF+L DL G+
Sbjct: 478 KTPIVVGNCTGFAVNRMFFPFTQVAYFLVDYGLDVYHIDHVITKFGMPMGPFRLADLVGF 537
Query: 538 GVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPII 597
GVA A+ K++ +++P+R ++S L+ ++L+ R G+++ KG Y Y+ K PDP + I
Sbjct: 538 GVAIASRKQYLQSYPERCYKSMLIQIMLEENRTGESSRKGFYLYDDKRKASPDPEMNKYI 597
Query: 598 EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSF 657
E+ R +++I+ K +T+ EIVEM+LFPVVNE+CR+L+EG+ ++ASDLD AS++G F
Sbjct: 598 EKSRSMASIVQDPKLPKLTDDEIVEMMLFPVVNEACRLLDEGVAMKASDLDVASIMGRGF 657
Query: 658 PSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSA 709
PSYRGG++FWAD+ GA Y+Y LK WS+ +G F+P +L RA +G+ L+A
Sbjct: 658 PSYRGGVMFWADSFGAKYIYDRLKDWSKFHGGIFEPYEYLSTRARQGLSLAA 709
>gi|413945015|gb|AFW77664.1| hypothetical protein ZEAMMB73_186479 [Zea mays]
Length = 718
Score = 821 bits (2121), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/717 (54%), Positives = 528/717 (73%), Gaps = 12/717 (1%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR 60
MA TMEV DGVA+IT+INPPVNAL++ ++A L+ + EA SR+D+KAIVLTG+ GR
Sbjct: 1 MARGITTMEVRADGVAVITIINPPVNALSLDVIASLQRNYAEALSRNDIKAIVLTGSKGR 60
Query: 61 FSGGFDINVFQ---KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELA 117
F GGFDI F+ K G +S ++ + +++ED KP VAA++G+ALGGGLE+A
Sbjct: 61 FCGGFDIAAFENKPKNEKPGSMS------IDFLTDIVEDAHKPSVAAIDGIALGGGLEVA 114
Query: 118 MGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKL 174
M CHARI+ P QLGLPEL LG+IPG TQRLPRLVGL KA+EMML SK+I + +L
Sbjct: 115 MVCHARISTPSAQLGLPELQLGIIPGMGGTQRLPRLVGLPKALEMMLTSKTIKGKMAHEL 174
Query: 175 GLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKT 234
GL+DAV ++ +L+ + WAL+I ++KPW +SLHRTD+L L E +++LK AR+QA+
Sbjct: 175 GLVDAVTSANKLVNTACSWALEIFEKKKPWFKSLHRTDRLPDLEEVKDILKFARVQAEMK 234
Query: 235 APNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPN 294
A N+ C+DVI+EGI+ G +G++KE K L TS+ L H FFAQRATSK+PN
Sbjct: 235 AANVQHPIVCIDVIKEGIISGPRAGLMKEVLSGKMLEQSQTSKSLRHFFFAQRATSKIPN 294
Query: 295 VTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRG 354
+T+IGL R ++K A++GGGLMGSGIAT ILNN VVLKEVN ++L GI I+ N++
Sbjct: 295 ITNIGLTARKIKKAAIVGGGLMGSGIATILILNNFNVVLKEVNEQFLSAGINRIKVNLQS 354
Query: 355 LVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHC 414
LV +G+LT++ L +L G LDY +F+D D+VIEAVIE + LKQ+IFS+LEK C +C
Sbjct: 355 LVRKGQLTEEDYEKKLSLLCGALDYEQFRDTDVVIEAVIEDMVLKQQIFSDLEKYCHHNC 414
Query: 415 ILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGK 474
I ATNTSTIDLNI+G+KT+SQDRI+GAHFFSPAHVM LLEIV T TS+QVI+DL+ + K
Sbjct: 415 IFATNTSTIDLNIIGQKTASQDRIVGAHFFSPAHVMSLLEIVCTHHTSSQVIVDLIDLAK 474
Query: 475 IIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDL 534
I+K P+VVGNCTGFAVNR FFPY+Q+A LV G+DV+ ID I FG+P+GPF+L DL
Sbjct: 475 KIQKTPIVVGNCTGFAVNRMFFPYAQAASFLVDYGLDVYHIDHVITQFGMPMGPFRLADL 534
Query: 535 AGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVL 594
G+GVA AT K++ +++P+RS++S L+ +L++ R G+++ KG Y Y+ K DP
Sbjct: 535 VGFGVAIATRKQYYQSYPERSYKSMLLQILVEDNRTGESSCKGFYVYDDKRKASRDPDFG 594
Query: 595 PIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLG 654
IE+ R ++ +M K + +T+ +IVEMI FPVVNE+CRVL+EGI ++ASDLD AS++G
Sbjct: 595 KYIEKSRNMAGVMQDPKLMKLTDNDIVEMIFFPVVNEACRVLDEGIALKASDLDVASIMG 654
Query: 655 MSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSAPV 711
M FPSYRGG++FWAD++GA YVY L WS+ YG FF+P +L RA +G L+A V
Sbjct: 655 MGFPSYRGGVMFWADSLGAKYVYDKLDAWSKDYGEFFRPCEYLAVRARQGASLAAKV 711
>gi|115462175|ref|NP_001054687.1| Os05g0155000 [Oryza sativa Japonica Group]
gi|113578238|dbj|BAF16601.1| Os05g0155000 [Oryza sativa Japonica Group]
Length = 724
Score = 818 bits (2113), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/718 (55%), Positives = 524/718 (72%), Gaps = 4/718 (0%)
Query: 5 RVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGG 64
R MEV GVA+IT+ NPPVNAL+I ++ LKD +EEA R+DVKAIV+TG GG FSGG
Sbjct: 6 RTEMEVRPGGVALITISNPPVNALSIHVLYSLKDHYEEALRRNDVKAIVVTGKGGVFSGG 65
Query: 65 FDINVFQKVHGAGDVSLMPD-VSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
DIN F + L D VS++++ N +E KP VAA+ G ALGGGLE++M C AR
Sbjct: 66 LDINTFGAIQRNKAEQLKVDYVSIDVMTNTLEAAGKPSVAAINGPALGGGLEISMVCQAR 125
Query: 124 IAAPKTQLGLPELTLGVIP---GTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAV 180
I+ P QLGLPEL LGVIP GTQRLPRLVGL+KA+EMML+SK I +EE +L LIDA+
Sbjct: 126 ISIPTAQLGLPELQLGVIPAFGGTQRLPRLVGLTKALEMMLMSKPIKAEEAHQLALIDAI 185
Query: 181 VTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQ 240
V+ +LL + WALDI+ R+PW+ +L RTDKL S EARE+LK AR Q +K A N+
Sbjct: 186 VSPNDLLNTACRWALDISESRRPWVHTLSRTDKLESPDEAREILKFARAQVQKQAANLRH 245
Query: 241 HQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGL 300
C+DVIEEGIV G +G+ KEA F++LV DT + LVHVFF+QRATSKVP +TD+GL
Sbjct: 246 PLVCIDVIEEGIVSGPQAGLRKEAIAFQDLVFSDTCKSLVHVFFSQRATSKVPGITDLGL 305
Query: 301 KPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGK 360
PR V KVA++GGGLMGSGIATA +L+N VVLKEVN ++L GI I+AN++ V GK
Sbjct: 306 MPRKVSKVAIVGGGLMGSGIATALMLSNYPVVLKEVNDKFLDAGIDRIKANLQSRVRNGK 365
Query: 361 LTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 420
+T++ L +L GV+DY FKDVD+VIE ++E+V +KQ++F++LE+ CP HC+LATNT
Sbjct: 366 MTKEIYEKTLSLLTGVVDYERFKDVDLVIEEIVENVKVKQQVFADLERYCPSHCVLATNT 425
Query: 421 STIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVP 480
STIDL+++GEKT+SQDRI GAHFFSPAHVMPLLEIVR+ TS QV++DL+ VGK IKK P
Sbjct: 426 STIDLDLIGEKTNSQDRIAGAHFFSPAHVMPLLEIVRSNHTSPQVVVDLLDVGKKIKKTP 485
Query: 481 VVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVA 540
VVVGNCTGFAVNR F PY+ A LLV G+DV++ID FG+P+GPF+LLDL G+GVA
Sbjct: 486 VVVGNCTGFAVNRMFSPYTSIALLLVDRGMDVYKIDQVCTEFGMPMGPFRLLDLVGFGVA 545
Query: 541 AATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEEC 600
A+ ++ + P +S L+ L+ + R G+A+ KG Y YE K PDP + +E+
Sbjct: 546 LASGMQYLENSPGSVDKSMLIPLMFEDKRTGEASQKGFYKYEGNRKAIPDPDIFKYVEKS 605
Query: 601 RRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSY 660
RR++ +P + + + +KEIVEM+ FPV+NE+C+VL EGI +ASDLD AS+ GM FP Y
Sbjct: 606 RRMAGTVPDLELLKLDDKEIVEMVFFPVINEACQVLSEGIANKASDLDIASIFGMGFPPY 665
Query: 661 RGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSAPVSSSSTSR 718
RGGIV+WAD++GA ++ L +W +G F+P +L ERA +G+PLS+ +++ +R
Sbjct: 666 RGGIVYWADSIGAKRIHARLSEWEMKHGQLFRPCSYLSERAAEGVPLSSTAKNNAKAR 723
>gi|326494018|dbj|BAJ85471.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 716
Score = 817 bits (2111), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/713 (54%), Positives = 532/713 (74%), Gaps = 8/713 (1%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR 60
MA TMEV +DGVA+IT+ NPPVNAL+ ++A L+ +EEA R+DVKAIVLTG GR
Sbjct: 1 MARGATTMEVRDDGVAVITISNPPVNALSFDVIASLQRNYEEALRRNDVKAIVLTGAKGR 60
Query: 61 FSGGFDINVFQKVHGAGDVSLMP-DVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMG 119
FSGGFDIN F G + P S++ + ++ED +KP VAA++G+ALGGGLELAM
Sbjct: 61 FSGGFDINGF----GNKPKNEKPGSFSIDFLTGVVEDAQKPSVAAIDGVALGGGLELAMV 116
Query: 120 CHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGL 176
CHAR++ P QLGLPEL LG+IPG TQRLPRLVGL KA+EMML+SKSI E K GL
Sbjct: 117 CHARVSTPSAQLGLPELQLGIIPGMGGTQRLPRLVGLKKALEMMLMSKSIKGVEAHKFGL 176
Query: 177 IDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAP 236
+D++V++++L+ + AL+I ++PW++SL RTD+L + EA+++LK AR +A K A
Sbjct: 177 VDSIVSADKLVSTACSCALEILEHKRPWLKSLLRTDRLTDIMEAKKILKFARAEALKQAA 236
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N+ C+DVIEEGI+ G + ++KE K L TS+ L HVFFAQRATSK+PN+
Sbjct: 237 NLQHPLVCIDVIEEGILFGPRAALMKEVLSGKMLEQSQTSKSLRHVFFAQRATSKIPNII 296
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
++GL PR + K A++GGGLMGSGIATA IL++I VVLKEVN ++L GI I+AN++ V
Sbjct: 297 NLGLTPRRILKAAIVGGGLMGSGIATAFILSDIVVVLKEVNEKFLNTGINRIKANLQSFV 356
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
+G++ ++ + L +L GVLDY +F+D D+VIEAVIE + LKQ+IFS+LE++C +CI
Sbjct: 357 KKGRMAKEDYDKKLSLLSGVLDYEQFRDADVVIEAVIEDISLKQQIFSDLERSCHSNCIF 416
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
ATNTSTIDL ++G++T+ QDRI+GAHFFSPAHVMPLLEIVRT++TS+QVI+DL+ V K I
Sbjct: 417 ATNTSTIDLQLIGQQTACQDRIVGAHFFSPAHVMPLLEIVRTQQTSSQVIVDLLDVAKKI 476
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
+K P+VVG+CTGFAVNR FFPY Q+A LLV+ G+DV+ ID I FG+P+GPF+L DL G
Sbjct: 477 RKTPIVVGSCTGFAVNRMFFPYGQAAGLLVNYGLDVYHIDHVIAKFGMPMGPFRLADLVG 536
Query: 537 YGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPI 596
+GVA AT K++ +++P+R ++S L +++LK R G+++ +G Y Y+ + PDP +
Sbjct: 537 FGVAVATGKQYYQSYPERCYKSHLTEIMLKENRTGESSRRGFYLYDDKREASPDPDIKKY 596
Query: 597 IEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMS 656
+E R ++ + K + +T+K+IVEM+ FPVVNE+CRVL+EGI ++ASDLD AS++GM
Sbjct: 597 VENSRNMAGVAQDPKLLKLTDKDIVEMVFFPVVNEACRVLDEGIALKASDLDVASIMGMG 656
Query: 657 FPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSA 709
FPS+RGG++FWAD++GA YVY L WS+ YG FFKP +L RA+ G L+A
Sbjct: 657 FPSFRGGVMFWADSLGAEYVYRRLDAWSKDYGEFFKPCEYLASRASCGTSLAA 709
>gi|222631293|gb|EEE63425.1| hypothetical protein OsJ_18237 [Oryza sativa Japonica Group]
Length = 718
Score = 817 bits (2111), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/712 (53%), Positives = 528/712 (74%), Gaps = 6/712 (0%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR 60
MA ++EV DGVA+IT+ NPPVNAL++ ++A L+ + EA R DVKAIVLTG GR
Sbjct: 1 MARGSTSVEVRRDGVAVITVSNPPVNALSLDVIASLQRDYGEALRRSDVKAIVLTGAKGR 60
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
FSGGFDIN F K + S++ + +++ED KP VAA++G+ALGGGLEL M C
Sbjct: 61 FSGGFDINAFDKKPKNEKPGYL---SIDFLTDIVEDAPKPSVAAIDGVALGGGLELVMVC 117
Query: 121 HARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 177
HAR++ QLGLPEL LG+IPG TQRLPRLVGL KA+EM+L+SK + E K GL+
Sbjct: 118 HARVSTSSAQLGLPELQLGIIPGLGGTQRLPRLVGLPKALEMLLMSKPLKGVEAHKFGLV 177
Query: 178 DAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 237
DAVV+++EL+ + WAL+I ++PW RSLHRTD+L +L E +++L AR+QA+K + +
Sbjct: 178 DAVVSADELISTACSWALEIVEDKRPWFRSLHRTDRLPALEETKKILNFARVQAQKQSAS 237
Query: 238 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 297
+ C+DVIEEGI+ G +G++KE K L M S+ L HVFFAQRATSK+PN++
Sbjct: 238 LQHPLVCIDVIEEGIISGPRAGLMKETLCGKMLEMSQISKSLRHVFFAQRATSKIPNISI 297
Query: 298 IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 357
+GL PR + KVA++GGGLMGSGIATA I NN+ V+LKEVN ++L GI ++AN++ LV
Sbjct: 298 LGLTPRRIHKVAIVGGGLMGSGIATALISNNLLVILKEVNEQFLDAGISRVKANLQSLVK 357
Query: 358 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 417
RG++T++ N L +L GVLDY +F++ D+VIEAVIE + LKQKIF++LEK C +CILA
Sbjct: 358 RGQMTKEDYENKLSLLSGVLDYEQFREADVVIEAVIEDLSLKQKIFADLEKYCHSNCILA 417
Query: 418 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 477
TNTSTIDL+++G+KTS QDRI GAHFFSPAH MPLLEI+RT RTS+QV++DL+ V K I+
Sbjct: 418 TNTSTIDLHLIGQKTSCQDRIAGAHFFSPAHAMPLLEIIRTHRTSSQVVIDLLNVAKQIR 477
Query: 478 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGY 537
K P+VVGNCTGFAVNR FFP++Q A LV G+DV+ ID I FG+P+GPF+L DL G+
Sbjct: 478 KTPIVVGNCTGFAVNRMFFPFTQVAYFLVDYGLDVYHIDHVITKFGMPMGPFRLADLVGF 537
Query: 538 GVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPII 597
GVA A+ K++ +++P+R ++S L+ ++L+ R G+++ KG Y Y+ K PDP + I
Sbjct: 538 GVAIASRKQYLQSYPERCYKSMLIQIMLEENRTGESSRKGFYLYDDKRKASPDPEMNKYI 597
Query: 598 EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSF 657
E+ R +++I+ K +T+ EIVEM+LFPVVNE+CR+L+EG+ ++ASDLD AS++G F
Sbjct: 598 EKSRSMASIVQDPKLPKLTDDEIVEMMLFPVVNEACRLLDEGVAMKASDLDVASIMGRGF 657
Query: 658 PSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSA 709
PSYRGG++FWAD+ GA Y+Y LK WS+ +G F+P +L RA +G+ L+A
Sbjct: 658 PSYRGGVMFWADSFGAKYIYDRLKDWSKYHGGIFEPYEYLSTRARQGLSLAA 709
>gi|47777470|gb|AAT38103.1| putative glyoxysomal fatty acid beta-oxidation multifunctional
protein [Oryza sativa Japonica Group]
Length = 724
Score = 810 bits (2091), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/715 (53%), Positives = 529/715 (73%), Gaps = 6/715 (0%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR 60
MA ++EV DGVA+IT+ NPPVNAL++ ++A L+ + EA R DVKAIVLTG GR
Sbjct: 1 MARGSTSVEVRRDGVAVITVSNPPVNALSLDVIASLQRDYGEALRRSDVKAIVLTGAKGR 60
Query: 61 FSGGFDINVFQK--VHGAGDVSLMPDVSVELV-VNLIEDCKKPIVAAVEGLALGGGLELA 117
FSGGFDIN F K +S + +++ +V L+ D KP VAA++G+ALGGGLEL
Sbjct: 61 FSGGFDINAFDKKPSKDCPVLSFVNKLNIYVVKFMLLPDAPKPSVAAIDGVALGGGLELV 120
Query: 118 MGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKL 174
M CHAR++ QLGLPEL LG+IPG TQRLPRLVGL KA+EM+L+SK + E K
Sbjct: 121 MVCHARVSTSSAQLGLPELQLGIIPGLGGTQRLPRLVGLPKALEMLLMSKPLKGVEAHKF 180
Query: 175 GLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKT 234
GL+DAVV+++EL+ + WAL+I ++PW RSLHRTD+L +L E +++L AR+QA+K
Sbjct: 181 GLVDAVVSADELISTACSWALEIVEDKRPWFRSLHRTDRLPALEETKKILNFARVQAQKQ 240
Query: 235 APNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPN 294
+ ++ C+DVIEEGI+ G +G++KE K L M S+ L HVFFAQRATSK+PN
Sbjct: 241 SASLQHPLVCIDVIEEGIISGPRAGLMKETLCGKMLEMSQISKSLRHVFFAQRATSKIPN 300
Query: 295 VTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRG 354
++ +GL PR + KVA++GGGLMGSGIATA I NN+ V+LKEVN ++L GI ++AN++
Sbjct: 301 ISILGLTPRRIHKVAIVGGGLMGSGIATALISNNLLVILKEVNEQFLDAGISRVKANLQS 360
Query: 355 LVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHC 414
LV RG++T++ N L +L GVLDY +F++ D+VIEAVIE + LKQKIF++LEK C +C
Sbjct: 361 LVKRGQMTKEDYENKLSLLSGVLDYEQFREADVVIEAVIEDLSLKQKIFADLEKYCHSNC 420
Query: 415 ILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGK 474
ILATNTSTIDL+++G+KTS QDRI GAHFFSPAH MPLLEI+RT RTS+QV++DL+ V K
Sbjct: 421 ILATNTSTIDLHLIGQKTSCQDRIAGAHFFSPAHAMPLLEIIRTHRTSSQVVIDLLNVAK 480
Query: 475 IIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDL 534
I+K P+VVGNCTGFAVNR FFP++Q A LV G+DV+ ID I FG+P+GPF+L DL
Sbjct: 481 QIRKTPIVVGNCTGFAVNRMFFPFTQVAYFLVDYGLDVYHIDHVITKFGMPMGPFRLADL 540
Query: 535 AGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVL 594
G+GVA A+ K++ +++P+R ++S L+ ++L+ R G+++ KG Y Y+ K PDP +
Sbjct: 541 VGFGVAIASRKQYLQSYPERCYKSMLIQIMLEENRTGESSRKGFYLYDDKRKASPDPEMN 600
Query: 595 PIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLG 654
IE+ R +++I+ K +T+ EIVEM+LFPVVNE+CR+L+EG+ ++ASDLD AS++G
Sbjct: 601 KYIEKSRSMASIVQDPKLPKLTDDEIVEMMLFPVVNEACRLLDEGVAMKASDLDVASIMG 660
Query: 655 MSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSA 709
FPSYRGG++FWAD+ GA Y+Y LK WS+ +G F+P +L RA +G+ L+A
Sbjct: 661 RGFPSYRGGVMFWADSFGAKYIYDRLKDWSKYHGGIFEPYEYLSTRARQGLSLAA 715
>gi|551444|emb|CAA55910.1| protein MFP-b [Cucumis sativus]
Length = 633
Score = 795 bits (2054), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/625 (60%), Positives = 485/625 (77%), Gaps = 3/625 (0%)
Query: 89 LVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQ 145
++ ++ E +KP VAA++GLALGGGLE+AM CHARI+ P QLGLPEL LG+IPG TQ
Sbjct: 1 MITDIFEAARKPAVAAIDGLALGGGLEVAMACHARISTPTAQLGLPELQLGIIPGFGGTQ 60
Query: 146 RLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWI 205
RLPRLVGLSKA+EMML SK I +E LGL+DA+V EEL+ +R WAL+I RR+PW+
Sbjct: 61 RLPRLVGLSKALEMMLTSKPIKGQEAHSLGLVDAIVPPEELINTARRWALEILERRRPWV 120
Query: 206 RSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAK 265
SLHRTDKL SL+EAR++ LAR QAKK PN+ AC+D +E G+V G +G+ KEA+
Sbjct: 121 HSLHRTDKLESLAEARKIFNLARAQAKKQYPNLKHTIACIDAVETGVVSGPRAGLWKEAE 180
Query: 266 VFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHI 325
F+ L+ DT + L+H+FFAQR+T+KVP VTD+GL PR ++KVA++GGGLMGSGIATA I
Sbjct: 181 EFQGLLHSDTCKSLIHIFFAQRSTTKVPGVTDLGLVPRQIKKVAIVGGGLMGSGIATALI 240
Query: 326 LNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 385
L+N +VVLKEVN ++L GI + AN++ V +G +T +K ++ +LKGVL+Y FKDV
Sbjct: 241 LSNYHVVLKEVNDKFLQAGIDRVRANLQSRVKKGNMTNEKFEKSISLLKGVLNYESFKDV 300
Query: 386 DMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFS 445
DMVIEAVIE+V LKQ+IFS+LEK CPPHC+LATNTSTIDL ++GE+ S+DRIIGAHFFS
Sbjct: 301 DMVIEAVIENVSLKQQIFSDLEKYCPPHCMLATNTSTIDLELIGERIKSRDRIIGAHFFS 360
Query: 446 PAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLL 505
PAH+MPLLEIVRT+ T+AQVI+DL+ VGK IKK PVVVGNCTGFAVNR FFPYSQ+A LL
Sbjct: 361 PAHIMPLLEIVRTKHTAAQVIVDLLDVGKNIKKTPVVVGNCTGFAVNRMFFPYSQAAILL 420
Query: 506 VSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLL 565
GVD ++ID AI FG+P+GPF+L DL G+GVAAAT+ +F +AFP+R+++S L+ L+
Sbjct: 421 AEHGVDPYQIDRAISKFGMPMGPFRLCDLVGFGVAAATASQFVQAFPERTYKSMLIPLMQ 480
Query: 566 KSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMIL 625
+ G++ KG Y Y+K K P+P + IE+ R S + K + EK+IVEMI
Sbjct: 481 EDKNAGESTRKGFYVYDKNRKAGPNPELKKYIEKARNSSGVSVDPKLTKLPEKDIVEMIF 540
Query: 626 FPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQ 685
FPVVNE+CRVL EGI V+A+DLD A V+GM FPSYRGG++FWAD++G+NY+Y+ L++WS+
Sbjct: 541 FPVVNEACRVLAEGIAVKAADLDIAGVMGMGFPSYRGGLMFWADSLGSNYIYSRLEEWSK 600
Query: 686 LYGNFFKPSRFLEERATKGIPLSAP 710
YG FFKP +L ERA +G LSAP
Sbjct: 601 QYGGFFKPCGYLAERAVQGATLSAP 625
>gi|222625457|gb|EEE59589.1| hypothetical protein OsJ_11897 [Oryza sativa Japonica Group]
Length = 710
Score = 788 bits (2036), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/691 (55%), Positives = 504/691 (72%), Gaps = 4/691 (0%)
Query: 32 IVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPD-VSVELV 90
++ LKD +EEA R+DVKAIV+TG GG FSGG DIN F + L D VS++++
Sbjct: 19 VLYSLKDHYEEALRRNDVKAIVVTGKGGVFSGGLDINTFGAIQRNKAEQLKVDYVSIDVM 78
Query: 91 VNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIP---GTQRL 147
N +E KP VAA+ G ALGGGLE++M C ARI+ P QLGLPEL LGVIP GTQRL
Sbjct: 79 TNTLEAAGKPSVAAINGPALGGGLEISMVCQARISIPTAQLGLPELQLGVIPAFGGTQRL 138
Query: 148 PRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRS 207
PRLVGL+KA+EMML+SK I +EE +L LIDA+V+ +LL + WALDI+ R+PW+ +
Sbjct: 139 PRLVGLTKALEMMLMSKPIKAEEAHQLALIDAIVSPNDLLNTACRWALDISESRRPWVHT 198
Query: 208 LHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVF 267
L RTDKL S EARE+LK AR Q +K A N+ C+DVIEEGIV G +G+ KEA F
Sbjct: 199 LSRTDKLESPDEAREILKFARAQVQKQAANLRHPLVCIDVIEEGIVSGPQAGLRKEAIAF 258
Query: 268 KELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN 327
++LV DT + LVHVFF+QRATSKVP +TD+GL PR V KVA++GGGLMGSGIATA +L+
Sbjct: 259 QDLVFSDTCKSLVHVFFSQRATSKVPGITDLGLMPRKVSKVAIVGGGLMGSGIATALMLS 318
Query: 328 NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDM 387
N VVLKEVN ++L GI I+AN++ V GK+T++ L +L GV+DY FKDVD+
Sbjct: 319 NYPVVLKEVNDKFLDAGIDRIKANLQSRVRNGKMTKEIYEKTLSLLTGVVDYERFKDVDL 378
Query: 388 VIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPA 447
VIE ++E+V +KQ++F++LE+ CP HC+LATNTSTIDL+++GEKT+SQDRI GAHFFSPA
Sbjct: 379 VIEEIVENVKVKQQVFADLERYCPSHCVLATNTSTIDLDLIGEKTNSQDRIAGAHFFSPA 438
Query: 448 HVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVS 507
HVMPLLEIVR+ TS QV++DL+ VGK IKK PVVVGNCTGFAVNR F PY+ A LLV
Sbjct: 439 HVMPLLEIVRSNHTSPQVVVDLLDVGKKIKKTPVVVGNCTGFAVNRMFSPYTSIALLLVD 498
Query: 508 LGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKS 567
G+DV++ID FG+P+GPF+LLDL G+GVA A+ ++ + P +S L+ L+ +
Sbjct: 499 RGMDVYKIDQVCTEFGMPMGPFRLLDLVGFGVALASGMQYLENSPGSVDKSMLIPLMFED 558
Query: 568 GRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFP 627
R G+A+ KG Y YE K PDP + +E+ RR++ +P + + + +KEIVEM+ FP
Sbjct: 559 KRTGEASQKGFYKYEGNRKAIPDPDIFKYVEKSRRMAGTVPDLELLKLDDKEIVEMVFFP 618
Query: 628 VVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLY 687
V+NE+C+VL EGI +ASDLD AS+ GM FP YRGGIV+WAD++GA ++ L +W +
Sbjct: 619 VINEACQVLSEGIANKASDLDIASIFGMGFPPYRGGIVYWADSIGAKRIHARLSEWEMKH 678
Query: 688 GNFFKPSRFLEERATKGIPLSAPVSSSSTSR 718
G F+P +L ERA +G+PLS+ +++ +R
Sbjct: 679 GQLFRPCSYLSERAAEGVPLSSTAKNNAKAR 709
>gi|168057325|ref|XP_001780666.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667934|gb|EDQ54552.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 726
Score = 786 bits (2029), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/720 (55%), Positives = 515/720 (71%), Gaps = 13/720 (1%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIP----IVAGLKDKFEEATSRDDVKAIVLTGNGGRF 61
V MEVG DGVA++TL PPVN+L +V+ LK+ EA +R DVKAIV+ G G+F
Sbjct: 5 VHMEVGEDGVALVTLNKPPVNSLDNSGPGSLVSQLKESICEAHARPDVKAIVIRGANGKF 64
Query: 62 SGGFDINVFQKVHGAGDVSLMPDV--SVELVVNLIEDCKKPIVAAVEGLALGGGLELAMG 119
SGG DI QKV GD + P ++IE KPIVAAVEG ALGGGLELAM
Sbjct: 65 SGGADIGSLQKVKQVGDGTTYPTHVRGSTFFNDIIEGGPKPIVAAVEGFALGGGLELAMA 124
Query: 120 CHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGL 176
CHARIAAPKTQLGLPELTLG+IPG T RLPRLVGL KA++MML SK + SEE +LGL
Sbjct: 125 CHARIAAPKTQLGLPELTLGIIPGLGGTARLPRLVGLVKAVDMMLTSKPVMSEEAKQLGL 184
Query: 177 IDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAP 236
+DAVV ++L+ V+R +ALDIA+ R+ W RSL D +G+ E+ ++LK AR +A+K
Sbjct: 185 VDAVVPLQQLVPVARKYALDIASGRQAWRRSLSLIDHIGTPEESSKILKQARARAQKAYR 244
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N+P LD IE+GI+HGG +G LKE + LV T++GL+H+FFAQR+ K+ VT
Sbjct: 245 NVPHPFVMLDCIEKGILHGGVAGTLKEEEESPMLVASPTAKGLIHIFFAQRSAFKIQGVT 304
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D GLKP ++ VAVIGGGLMGSGIATA LNN+ V+LKEVN E+L G+K IEANV
Sbjct: 305 DSGLKPHKMKSVAVIGGGLMGSGIATALALNNVPVILKEVNQEFLQAGLKRIEANVN--- 361
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R + +KA L +KG LDY++F DVDMVIEAVIES+PLKQ+IF++LEK C C+L
Sbjct: 362 ARLRSASEKAQKVLSFVKGTLDYADFSDVDMVIEAVIESIPLKQQIFADLEKYCKSTCLL 421
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTSTIDL ++G+KT SQDRIIGAHFFSPAHVMPLLEIVRT TS Q I D++ + K I
Sbjct: 422 ASNTSTIDLGLIGQKTKSQDRIIGAHFFSPAHVMPLLEIVRTHDTSKQAIQDMLALAKTI 481
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
KKVPVVV +C GFAVNR FFPY Q+ LLV LG +RID+ +++FG+P+GPF+L DL G
Sbjct: 482 KKVPVVVRSCVGFAVNRMFFPYFQAGHLLVHLGTHPYRIDAVVKAFGMPMGPFRLADLTG 541
Query: 537 YGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKP-KPDPSVLP 595
+ ATS+ + AF +R++Q+ L DLLL+ R G+ G G Y Y+KGS+ +P P +
Sbjct: 542 IQIGQATSRIYKDAFGERTYQTNLNDLLLEDNRYGERTGMGYYNYKKGSRAEQPAPELDG 601
Query: 596 IIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGM 655
+ + R+ ++++P GK + ++++EIVEMI + VVNE+CRVL+E +VVR++DLD ASVLGM
Sbjct: 602 YLTKTRQAASLIPNGKIVDISDEEIVEMIFYGVVNEACRVLDEDVVVRSADLDIASVLGM 661
Query: 656 SFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSAPVSSSS 715
FP+YRGG+VFW D VG +Y+ LK WS LYG+F++PS LE A PLS V S
Sbjct: 662 GFPAYRGGVVFWGDHVGVERIYSKLKHWSTLYGSFYQPSAALERAAHGKYPLSQIVEKRS 721
>gi|54291849|gb|AAV32217.1| putative fatty acid beta-oxidation multifunctional protein [Oryza
sativa Japonica Group]
Length = 668
Score = 758 bits (1957), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/662 (56%), Positives = 485/662 (73%), Gaps = 4/662 (0%)
Query: 5 RVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGG 64
R MEV GVA+IT+ NPPVNAL+I ++ LKD +EEA R+DVKAIV+TG GG FSGG
Sbjct: 6 RTEMEVRPGGVALITISNPPVNALSIHVLYSLKDHYEEALRRNDVKAIVVTGKGGVFSGG 65
Query: 65 FDINVFQKVHGAGDVSLMPD-VSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
DIN F + L D VS++++ N +E KP VAA+ G ALGGGLE++M C AR
Sbjct: 66 LDINTFGAIQRNKAEQLKVDYVSIDVMTNTLEAAGKPSVAAINGPALGGGLEISMVCQAR 125
Query: 124 IAAPKTQLGLPELTLGVIP---GTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAV 180
I+ P QLGLPEL LGVIP GTQRLPRLVGL+KA+EMML+SK I +EE +L LIDA+
Sbjct: 126 ISIPTAQLGLPELQLGVIPAFGGTQRLPRLVGLTKALEMMLMSKPIKAEEAHQLALIDAI 185
Query: 181 VTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQ 240
V+ +LL + WALDI+ R+PW+ +L RTDKL S EARE+LK AR Q +K A N+
Sbjct: 186 VSPNDLLNTACRWALDISESRRPWVHTLSRTDKLESPDEAREILKFARAQVQKQAANLRH 245
Query: 241 HQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGL 300
C+DVIEEGIV G +G+ KEA F++LV DT + LVHVFF+QRATSKVP +TD+GL
Sbjct: 246 PLVCIDVIEEGIVSGPQAGLRKEAIAFQDLVFSDTCKSLVHVFFSQRATSKVPGITDLGL 305
Query: 301 KPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGK 360
PR V KVA++GGGLMGSGIATA +L+N VVLKEVN ++L GI I+AN++ V GK
Sbjct: 306 MPRKVSKVAIVGGGLMGSGIATALMLSNYPVVLKEVNDKFLDAGIDRIKANLQSRVRNGK 365
Query: 361 LTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 420
+T++ L +L GV+DY FKDVD+VIE ++E+V +KQ++F++LE+ CP HC+LATNT
Sbjct: 366 MTKEIYEKTLSLLTGVVDYERFKDVDLVIEEIVENVKVKQQVFADLERYCPSHCVLATNT 425
Query: 421 STIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVP 480
STIDL+++GEKT+SQDRI GAHFFSPAHVMPLLEIVR+ TS QV++DL+ VGK IKK P
Sbjct: 426 STIDLDLIGEKTNSQDRIAGAHFFSPAHVMPLLEIVRSNHTSPQVVVDLLDVGKKIKKTP 485
Query: 481 VVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVA 540
VVVGNCTGFAVNR F PY+ A LLV G+DV++ID FG+P+GPF+LLDL G+GVA
Sbjct: 486 VVVGNCTGFAVNRMFSPYTSIALLLVDRGMDVYKIDQVCTEFGMPMGPFRLLDLVGFGVA 545
Query: 541 AATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEEC 600
A+ ++ + P +S L+ L+ + R G+A+ KG Y YE K PDP + +E+
Sbjct: 546 LASGMQYLENSPGSVDKSMLIPLMFEDKRTGEASQKGFYKYEGNRKAIPDPDIFKYVEKS 605
Query: 601 RRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSY 660
RR++ +P + + + +KEIVEM+ FPV+NE+C+VL EGI +ASDLD AS+ GM FP Y
Sbjct: 606 RRMAGTVPDLELLKLDDKEIVEMVFFPVINEACQVLSEGIANKASDLDIASIFGMGFPPY 665
Query: 661 RG 662
G
Sbjct: 666 SG 667
>gi|384245449|gb|EIE18943.1| putative glyoxysomal fatty acid beta-oxidation multifunctional
protein [Coccomyxa subellipsoidea C-169]
Length = 732
Score = 729 bits (1883), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/735 (51%), Positives = 497/735 (67%), Gaps = 25/735 (3%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR 60
M P T+EVG+DGVAIITL NPPVNAL ++ L + EA SR DVKAIV+TG GR
Sbjct: 1 MTNPTATLEVGSDGVAIITLTNPPVNALHPAVLNALFNCLREAHSRQDVKAIVVTGAKGR 60
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
FS GFDIN F K G G S + D L+E KP VAAVE +ALGGGLE+AM C
Sbjct: 61 FSAGFDINQFAKSGGGGIDSRINDN----FCALLESGPKPTVAAVETMALGGGLEVAMAC 116
Query: 121 HARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 177
+AR+ P T++GLPEL LG++PG TQRLPRLVGL A +MML S I ++ KLGL+
Sbjct: 117 NARLCTPGTKVGLPELQLGILPGFGGTQRLPRLVGLQTAAQMMLTSAPINDKKAAKLGLV 176
Query: 178 DAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 237
D VV E+LL +R WA +IAA KP SL+RTDKL SL EA +L+ AR + +K AP+
Sbjct: 177 DGVVPKEKLLAAARAWASEIAAGTKPRNFSLYRTDKLESLGEALPILEFARAETQKRAPH 236
Query: 238 MPQHQACLDVIEEGIVHGGYSGVLKEAKV-----------FKELVMLDTSRGLVHVFFAQ 286
+ CLD I GI GG +G LK+A++ F + LDT + LVH+FFAQ
Sbjct: 237 LTHPLLCLDAIRVGIEEGGLAG-LKQARICTPNFCAESVAFNKAASLDTHKALVHIFFAQ 295
Query: 287 RATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIK 346
RAT KV +TD GLKPR ++K+AV+GGGLMGSGIATA L I V++KEVN ++L G+
Sbjct: 296 RATKKVKGITDGGLKPRRIKKIAVLGGGLMGSGIATASALAGIEVIVKEVNQKFLEGGMA 355
Query: 347 TIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSEL 406
I++N+ V +GK+TQ+ A+ +KG LDY++F VDMVIEAVIE V LKQ+IF++L
Sbjct: 356 RIKSNLASRVKKGKMTQEAADAVFARVKGALDYNDFASVDMVIEAVIEDVGLKQRIFADL 415
Query: 407 EKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVI 466
E+ C P IL++NTSTID++++G KT + +RI+GAHFFSPAH+MPLLEIVRT++TS QVI
Sbjct: 416 ERVCRPDAILSSNTSTIDISLIGAKTRAAERIVGAHFFSPAHIMPLLEIVRTDKTSPQVI 475
Query: 467 LDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRS-FGLP 525
LD + G IKK PVVVGNCTGFAVNR FFPY+Q+A LLV +G+D ++ID AI + FG+P
Sbjct: 476 LDTLEYGSAIKKTPVVVGNCTGFAVNRVFFPYTQAACLLVDMGLDPYKIDMAIFAGFGMP 535
Query: 526 IGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGS 585
+GPF+L DL G + K F +FP+R++ + L+ L ++ R G+ G G Y Y+
Sbjct: 536 MGPFRLSDLVGADIGLHVGKNFLDSFPERTYPAHLIVKLNEAKRLGEKTGSGFYAYDARR 595
Query: 586 KPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRAS 645
K KPDPS+ PI+E R+ + + GGKP ++ ++I+E I FPVVNE CRV+ EGIV + +
Sbjct: 596 KAKPDPSLAPIVEASRKAAGLYKGGKPPPMSPQDIIEFIFFPVVNEGCRVIAEGIVDKPA 655
Query: 646 DLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLY-----GNFFKPSRFLEER 700
DLD A+VL M FP+YRGG++ WAD +G V L W+ + FFKP +L
Sbjct: 656 DLDVATVLSMGFPAYRGGLIKWADLIGPARVAERLNGWAAQFEASGLAGFFKPCDYLANA 715
Query: 701 ATKGIPLSAPVSSSS 715
A G L A V+ S
Sbjct: 716 ARTGTQLGAGVAPGS 730
>gi|307103971|gb|EFN52227.1| hypothetical protein CHLNCDRAFT_59763 [Chlorella variabilis]
Length = 723
Score = 721 bits (1861), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/725 (49%), Positives = 495/725 (68%), Gaps = 14/725 (1%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR 60
M+ P T+ V DG+A++TL+NPPVN+L ++ L + EA +R +VKAIV+TG GR
Sbjct: 1 MSGPHTTLAVTEDGIALVTLVNPPVNSLHPTVLQSLFNHLREAQARQEVKAIVITGANGR 60
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSV-ELVVNLIEDCKKPIVAAVEGLALGGGLELAMG 119
F GFDIN F + G G + D + + +LIE KP VAAV+ +ALGGG ELA+
Sbjct: 61 FCAGFDINQFVQSSGGGGI----DAHINDAFCDLIESGPKPTVAAVQTMALGGGCELALA 116
Query: 120 CHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGL 176
C+AR+ P T GLPEL LG+IPG TQRLPR VGL KA+EMML S I +LGL
Sbjct: 117 CNARVCTPGTSFGLPELQLGIIPGFGGTQRLPRAVGLQKAVEMMLTSTPIKDRAARELGL 176
Query: 177 IDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAP 236
D VV +LL+V++ A DIAA ++ +++L+RTDKL L EA +L+ AR QA K A
Sbjct: 177 ADEVVPPGQLLEVAKRVAFDIAAGKRARVQTLYRTDKLEPLGEALAILQFARSQAAKRAR 236
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
++ CLD I+ GI HGG +G+ KE + F LDT + LVH+FFAQR+T K+ VT
Sbjct: 237 HLMHPLLCLDAIQYGIEHGGRAGLQKEGECFGAAAALDTHKALVHIFFAQRSTKKIRGVT 296
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D GL+PR +++VAV+GGGLMGSGIATA +L + V+LKEVN ++L G+ I++N+ V
Sbjct: 297 DTGLRPRPIKRVAVLGGGLMGSGIATACVLAGVEVLLKEVNQKFLDAGMGRIQSNLASRV 356
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
+G++T+ A A+ ++G LDYS F VDMVIEA IE V LKQ+IF+ELE++C IL
Sbjct: 357 KKGRMTEQMAQAAMSRVQGALDYSGFGSVDMVIEAAIEDVGLKQEIFAELERSCRKDAIL 416
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
ATNTSTI++ +VG KTS DRI+GAHFFSPAHVMPLLEIVRT++TS QVILD + + I
Sbjct: 417 ATNTSTINIELVGAKTSCADRILGAHFFSPAHVMPLLEIVRTDQTSKQVILDTLELSTKI 476
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
KK PVVVGNCTGFAVNR FFPY+Q+A +LV +G+D +RID I FG+P+GPF+L DL G
Sbjct: 477 KKTPVVVGNCTGFAVNRVFFPYTQAACMLVDMGLDPYRIDKIIAGFGMPMGPFRLSDLVG 536
Query: 537 YGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPI 596
+ K F ++F R + + ++ LL ++ R G+ +G+G Y Y+ + PDP + P+
Sbjct: 537 ADIGLHVGKNFLESFSKRCYPARIIQLLNENKRLGEKSGRGFYKYDARRRASPDPDLAPL 596
Query: 597 IEECRRLSNI-MPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGM 655
+++ R+ + + G P + +++IVE I FPVVNE CRV++EGIV + +DLD A V+GM
Sbjct: 597 VQQSRKGAGLYQDGAPPPKMNDQDIVEFIFFPVVNEGCRVIDEGIVDKPADLDVAMVMGM 656
Query: 656 SFPSYRGGIVFWADAVGANYVYTSLKKWSQLYG-----NFFKPSRFLEERATKGIPLSAP 710
FP++RGG++FWAD VGA+Y+ L W++ + FFKPS +LE A +G LSA
Sbjct: 657 GFPAFRGGLIFWADLVGADYICQRLAGWAKQFSGTALQGFFKPSAYLERCARQGTKLSAG 716
Query: 711 VSSSS 715
++S
Sbjct: 717 KGAAS 721
>gi|255080968|ref|XP_002504050.1| predicted protein [Micromonas sp. RCC299]
gi|226519317|gb|ACO65308.1| predicted protein [Micromonas sp. RCC299]
Length = 720
Score = 680 bits (1754), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/710 (49%), Positives = 477/710 (67%), Gaps = 11/710 (1%)
Query: 8 MEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDI 67
ME+ DGVA+I++ NPPVNALAIP++ G++ + + A + V+AIV+TG+ G+FSGGFDI
Sbjct: 1 MEI-RDGVALISMSNPPVNALAIPVLEGIEAQVKAAQADSGVRAIVITGSRGKFSGGFDI 59
Query: 68 NVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP 127
+ V M D + ++ +++E KP VAA+E LALGGGLE+AM C+AR+A P
Sbjct: 60 TQLKARTEGKPVRNMSDFN-GVLNSIVEAGPKPTVAAIENLALGGGLEVAMACNARVATP 118
Query: 128 KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 184
K QLGLPEL LGVIPG TQRLPRLVGL KA+EMML SK + +EE KLGL+DA+V ++
Sbjct: 119 KAQLGLPELQLGVIPGFGGTQRLPRLVGLPKALEMMLKSKPVKAEEALKLGLVDAIVPAD 178
Query: 185 ELLKVSRLWALDIAARRKPWIRSLHRTDKL-GSLSEAREVLKLARLQAKKTAPNMPQHQA 243
+L+ + A DIA +R P + + KL + A++V AR QAK+ MP
Sbjct: 179 QLIAKATQLAKDIADKRIPRKMASFDSAKLPADEAMAKKVFAGARRQAKRVKHLMPHPWL 238
Query: 244 CLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPR 303
CLD +E G+ G +G+ E F + V +GLVH FFA R+T+ VP VTD+GLKPR
Sbjct: 239 CLDAVETGVTKGSVAGLASEQDAFAKAVSSRACKGLVHFFFASRSTAAVPGVTDVGLKPR 298
Query: 304 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQ 363
+ VAV+GGGLMGSGIATA L+ + V+LKE+N ++L G+ + AN+ V +G++T
Sbjct: 299 ATKCVAVVGGGLMGSGIATACALSGVRVLLKEINQKFLDAGMARVRANLASNVKKGRMTS 358
Query: 364 DKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI 423
KA+ + L Y +FK+ DMVIEAVIE++ LKQKIF++LE++C CIL+TNTSTI
Sbjct: 359 QKADAIYSLCTPCLTYDKFKEADMVIEAVIENLDLKQKIFADLERSCRSDCILSTNTSTI 418
Query: 424 DLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVV 483
D+ V K + +RI+GAHFFSPAHVM L EI+RT+ T QV++D + + K IKK PVVV
Sbjct: 419 DITKVASKMRNPERILGAHFFSPAHVMQLFEIIRTDATPPQVLVDALGLSKQIKKTPVVV 478
Query: 484 GNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAAT 543
GNCTGFAVNR FFPY+ SA LLV LG+D + ID+AIR+FG+P+GPF+L DL G+ V
Sbjct: 479 GNCTGFAVNRVFFPYTMSACLLVDLGLDPYAIDNAIRAFGMPMGPFRLGDLVGHDVGVHV 538
Query: 544 SKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRL 603
+ F FP R ++S L+ L+KSGR G+ +GKG Y Y+ PDP + + R
Sbjct: 539 GQNFIDDFPLRVYESKLIPGLMKSGRMGEKSGKGFYVYDAKRAATPDPEGIAALLHASRA 598
Query: 604 S-----NIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFP 658
+ G+ +++T +I EMI FPVVNE+CR L EG+VVRASDLD AS+LGM FP
Sbjct: 599 AASGRFKRSTSGELLAMTADDIAEMIFFPVVNEACRCLAEGVVVRASDLDVASILGMGFP 658
Query: 659 SYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLS 708
+RGG+V WAD VGA + L++W YG ++P +LE+ A +G L+
Sbjct: 659 PFRGGVVHWADQVGAGRIAARLREWCTAYGGIYQPCPYLEDCAVQGRSLA 708
>gi|302766729|ref|XP_002966785.1| hypothetical protein SELMODRAFT_439712 [Selaginella moellendorffii]
gi|300166205|gb|EFJ32812.1| hypothetical protein SELMODRAFT_439712 [Selaginella moellendorffii]
Length = 732
Score = 679 bits (1751), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/727 (49%), Positives = 484/727 (66%), Gaps = 21/727 (2%)
Query: 3 APRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFS 62
A +V +EVG DGVA++ + NPPVN+L+ ++ L +KF EA R DV+AIVLTG +FS
Sbjct: 4 ASKVRLEVGGDGVALLVIDNPPVNSLSAQVMGELAEKFIEAHERADVQAIVLTGANNKFS 63
Query: 63 GGFDINVFQKVHG-------------AGDVSLMPDVSVE---LVVNLIEDCKKPIVAAVE 106
GG DI K G G V + V L+ ++IE KP VAA+
Sbjct: 64 GGADIKSMSKAPGLIYSCFLSIQQPTGGIVGAVRKTEVSGLVLMNDIIEGGSKPAVAAIH 123
Query: 107 GLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLS 163
G ALGGGLELAM CHAR+A+P +LGLPEL LG+IPG TQRLPRLVG+ KA+EMM+ S
Sbjct: 124 GFALGGGLELAMACHARVASPDARLGLPELQLGIIPGLGGTQRLPRLVGVGKAVEMMMTS 183
Query: 164 KSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREV 223
K I ++E + GL+DA+ +L++ +R +A IA + P++++L R+DKL L +A +
Sbjct: 184 KMIKAKEAHEAGLVDAICDYPQLIQFARNYAKGIANKTHPFLKTLERSDKLEPLHKALHI 243
Query: 224 LKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVF 283
+ ARL+AKKT ++ CL VIE GI GG G + E K+ + V ++ L+H+F
Sbjct: 244 IANARLRAKKTHKHVEYPFICLAVIEHGIHKGGIEGTIFERKMGVQTVDSLPAKALMHIF 303
Query: 284 FAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLK 343
A+R KVPNV+D L+ R V+ V VIGGGLMGSGIATA I++N+ V+LKEV+ E L
Sbjct: 304 LAERTVYKVPNVSDGRLEARPVKTVGVIGGGLMGSGIATALIVHNVRVLLKEVDEERLQA 363
Query: 344 GIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIF 403
GI ++AN++ V++G ++Q + AL +L G +DY F+ ++VIEAVIES+PLK+KIF
Sbjct: 364 GINRVQANLKSRVSKGSMSQAEFQRALGLLVGTVDYKGFESANLVIEAVIESIPLKKKIF 423
Query: 404 SELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSA 463
EL+ C CILA+NTS+ DLN + + S +DRIIGAHFFSPAHVM LLEIVRT+ TS
Sbjct: 424 GELDAICSRDCILASNTSSCDLNEITDGVSFRDRIIGAHFFSPAHVMRLLEIVRTDSTSH 483
Query: 464 QVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFG 523
Q I DL+ + K I KVPVVV N GFAVNR FFPY + A LV LGV +RID+ I+ FG
Sbjct: 484 QSICDLLALSKKIGKVPVVVQNAVGFAVNRVFFPYHRIAAFLVDLGVHPYRIDAVIKDFG 543
Query: 524 LPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEK 583
+PIGPF+L DLAG + A + F+K F DR + S + L+ K+ R G+A GKG Y Y
Sbjct: 544 MPIGPFRLGDLAGLQIGALVADTFEKEFGDRLYPSYMGTLMAKANRTGEATGKGYYNYHG 603
Query: 584 GSKPKPDPSVLPIIEECRRLSNIMPGG-KPISVTEKEIVEMILFPVVNESCRVLEEGIVV 642
+ P P + I+EE R+L+ + G +T+K+IVEMI FP+VNE+CRV++E IV+
Sbjct: 604 TRQEHPAPELDEILEESRKLAGLNARGLTAEGITDKDIVEMIFFPIVNEACRVIDEKIVI 663
Query: 643 RASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEE-RA 701
RASDLD ASVLGM FP++RGGI FW VG +Y+ L++W YG+ F+P+ L + A
Sbjct: 664 RASDLDVASVLGMGFPAFRGGIAFWGHTVGLHYILVRLQQWHSHYGSIFRPTSSLHKLAA 723
Query: 702 TKGIPLS 708
TK + L+
Sbjct: 724 TKSMMLA 730
>gi|302792393|ref|XP_002977962.1| hypothetical protein SELMODRAFT_176615 [Selaginella moellendorffii]
gi|300153983|gb|EFJ20619.1| hypothetical protein SELMODRAFT_176615 [Selaginella moellendorffii]
Length = 710
Score = 673 bits (1736), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/711 (49%), Positives = 477/711 (67%), Gaps = 11/711 (1%)
Query: 3 APRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFS 62
A +V +EVG DGVA++ + NPPVN+L+ ++ L +KF EA R DV+AIVLTGN S
Sbjct: 4 ASKVRLEVGGDGVALLVIDNPPVNSLSAQVMGELAEKFIEAHERADVQAIVLTGN----S 59
Query: 63 GGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHA 122
G + + F H D + + L + + KP VAA+ G ALGGGLELAM CHA
Sbjct: 60 SGMNRSFFS--HFFSDGTFQEPTTTSLFLFCKQGGSKPAVAAIHGFALGGGLELAMACHA 117
Query: 123 RIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDA 179
R+A+P +LGLPEL LG+IPG TQRLPRLVG+ KA+EMM+ SK I ++E + GL+DA
Sbjct: 118 RVASPDARLGLPELQLGIIPGLGGTQRLPRLVGVGKAVEMMMTSKMIKAKEAHEAGLVDA 177
Query: 180 VVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMP 239
+ +L++ +R +A IA + P++++L R+DKL L EA ++ ARL+AKKT ++
Sbjct: 178 ICDYPQLIQFARNYAKGIANKTHPFLKTLERSDKLEPLHEALHIIANARLRAKKTHKHVE 237
Query: 240 QHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIG 299
CL VIE GI GG G + E K+ + V ++ L+H+F A+R KVPNV+D
Sbjct: 238 YPFICLAVIEHGIHKGGTEGTIFERKMGVQTVDSLPAKALMHIFLAERTVYKVPNVSDGR 297
Query: 300 LKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRG 359
L+ R V+ V VIGGGLMGSGIATA I++N+ V+LKEV+ E L GI ++AN++ V++G
Sbjct: 298 LEARPVKTVGVIGGGLMGSGIATALIVHNVRVLLKEVDEERLQAGINRVQANLKSRVSKG 357
Query: 360 KLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATN 419
++Q + AL +L G +DY F+ ++VIEAVIES+PLK+KIF EL+ C CILA+N
Sbjct: 358 SMSQAEFQRALGLLVGTVDYKGFESANLVIEAVIESIPLKKKIFGELDAICSRDCILASN 417
Query: 420 TSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKV 479
TS+ DLN + + S +DRIIGAHFFSPAHVM LLEIVRT+ TS Q I DL+ + K I KV
Sbjct: 418 TSSCDLNEITDGVSFRDRIIGAHFFSPAHVMRLLEIVRTDSTSNQSICDLLALSKKIGKV 477
Query: 480 PVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGV 539
PVVV N GFAVNR FFPY + A LV LGV +RID+ I+ FG+PIGPF+L DLAG +
Sbjct: 478 PVVVQNAVGFAVNRVFFPYHRIAAFLVDLGVHPYRIDAVIKDFGMPIGPFRLGDLAGLQI 537
Query: 540 AAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEE 599
A + F K F DR + S + L+ K+ R G+A GKG Y Y + P P + I+EE
Sbjct: 538 GALVADTFKKEFGDRLYPSYMGTLMAKANRTGEATGKGYYNYHGTRQEHPAPELDEILEE 597
Query: 600 CRRLSNIMPGG-KPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFP 658
R+L+ + G +T+K+IVEMI FP+VNE+CRV++E IV+RASDLD ASVLGM FP
Sbjct: 598 SRKLAGLNARGLTAEGITDKDIVEMIFFPIVNEACRVIDEKIVIRASDLDVASVLGMGFP 657
Query: 659 SYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEE-RATKGIPLS 708
++RGGI FW VG +Y+ L++W YG+ F+P+ L + ATK + L+
Sbjct: 658 AFRGGIAFWGHTVGLHYILVRLQQWHSHYGSIFRPTSSLHKLAATKSMMLA 708
>gi|145345062|ref|XP_001417042.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577268|gb|ABO95335.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 722
Score = 656 bits (1692), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/714 (48%), Positives = 476/714 (66%), Gaps = 8/714 (1%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+DGVA+I L NPPVNALA+P++ GL+ ++A + +V+AIV+ G GG+FSGGFDI +
Sbjct: 9 DDGVAVIELNNPPVNALAVPVLEGLERAVKDAQANSNVRAIVIHGAGGKFSGGFDITQLR 68
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K + + D + ++ +E KP VAA+E LALGGGLE+AM C+AR+A P+ QL
Sbjct: 69 KSTQGKPSNDVGDFNA-ILCRYVEGGSKPCVAAIENLALGGGLEVAMSCNARVATPRAQL 127
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
GLPEL LGVIPG TQRLPRLVGL K++EMML SKSI +EE KLGL+D + ++
Sbjct: 128 GLPELQLGVIPGFGGTQRLPRLVGLEKSLEMMLKSKSIKAEEALKLGLVDKIADPSRIVA 187
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 248
+ A IA+ S++R DKL +LK A +AK+ MP C+D I
Sbjct: 188 EASALAKAIASGSVKRELSMYRKDKLPDPKSTEMILKEASKKAKRVQSVMPHVALCVDAI 247
Query: 249 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 308
G+ G G+ +EA+ FK+ V ++GLVH FFAQRAT+ VP +TD+GLKPR ++ V
Sbjct: 248 SVGLAQGPEEGLKREAENFKKAVSSPAAKGLVHFFFAQRATNVVPGITDVGLKPRPMKSV 307
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
V+GGGLMGSGIATA +L I VVLKE+ E+L G+ I++N+ +V +G++T+DKA
Sbjct: 308 GVVGGGLMGSGIATACLLAGIQVVLKEIKQEFLDAGVGRIQSNLTSMVRKGRMTEDKARQ 367
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
+ ++K L +F+ DMVIEAVIE++PLKQKIF ELE+ C P CIL+TNTSTID+ +
Sbjct: 368 LMSLVKPTLTDQDFRQCDMVIEAVIENLPLKQKIFCELERICKPDCILSTNTSTIDITKI 427
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
K + +RI+GAHFFSPAHVM L EI+RT+ T AQ+++D + + K IKK PVVVGNCTG
Sbjct: 428 AAKMKNPERIVGAHFFSPAHVMQLFEIIRTDATPAQILVDTLGLSKQIKKTPVVVGNCTG 487
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
FAVNR FFPY+ SA +LV +G D + ID AI FG+P+GPF+L DL G+ V + F
Sbjct: 488 FAVNRIFFPYTMSATVLVDIGCDPYAIDRAIMMFGMPMGPFRLGDLVGHDVGVHVGQNFI 547
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMP 608
FPDR ++SPL+ LL + R G+ +G G Y Y+ + PD + ++ R + +P
Sbjct: 548 DDFPDRVYRSPLIPSLLANKRLGEKSGAGFYKYDNKRRATPDSEGVEMLIAASRAQSKLP 607
Query: 609 -GGKPI--SVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIV 665
G PI ++ +EI EMI FPVVNE+CRVL EGIVV+A D+D A++LGM FP++RGG+V
Sbjct: 608 LDGSPIPAGLSPQEIAEMIFFPVVNEACRVLSEGIVVKAGDIDTAAILGMGFPAFRGGVV 667
Query: 666 FWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLS-APVSSSSTSR 718
W D+VG + L+ WS YG ++P +LE A +G L+ P+ + SR
Sbjct: 668 HWGDSVGPAVIAAKLRAWSTKYGGLYQPCPYLENCAIQGRTLAQGPLDTKIKSR 721
>gi|303271069|ref|XP_003054896.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462870|gb|EEH60148.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 712
Score = 652 bits (1681), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/730 (49%), Positives = 474/730 (64%), Gaps = 31/730 (4%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR 60
M P VT+EV N GVA++T+ NPPVNALAI I+ GLK + E A V+AIV+TG+ G+
Sbjct: 1 MGGPAVTLEVAN-GVAVVTMSNPPVNALAIKILEGLKTQVEAAQRDPKVRAIVITGSKGK 59
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
FSGGFDI + V M D + L +++E KP VAA+E LALGGGLE+AM C
Sbjct: 60 FSGGFDITQLKARTEGKPVRNMSDFNATLN-SVVESGAKPTVAAIENLALGGGLEVAMAC 118
Query: 121 HARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 177
+AR+A PK QLGLPEL LGVIPG TQRLPRLVGL KA+EMML SK I +EE KLGL+
Sbjct: 119 NARVATPKAQLGLPELQLGVIPGFGGTQRLPRLVGLQKALEMMLKSKPIKAEEALKLGLV 178
Query: 178 DAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 237
DA+ + L + + ALDIA +R +EA+++ +AR AK+
Sbjct: 179 DAIAPRDALTQTASKLALDIAEKR----------------AEAKKIFAVARRGAKRVQKL 222
Query: 238 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 297
MP C+D IE GI G G++ E F + V +GLVH FFA R T+ VP VTD
Sbjct: 223 MPHPMLCIDAIEAGINKGASEGLIVEQDAFAKAVSSAACKGLVHFFFASRGTAAVPGVTD 282
Query: 298 IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 357
+GL PR ++ V V+GGGLMGSGIATA ++N + VVLKE+N ++L G+ ++AN+ V
Sbjct: 283 VGLAPRVMKCVGVVGGGLMGSGIATACVMNGVSVVLKEINQKFLDAGMSRVKANLASAVK 342
Query: 358 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 417
+G+LTQ KA+ L Y F VDM IEAVIE++ LKQKIFS+LE +C P IL+
Sbjct: 343 KGRLTQQKADAMYANCHPTLSYGAFSKVDMAIEAVIENLGLKQKIFSDLESSCRPDAILS 402
Query: 418 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 477
TNTSTID+ V +K + +RI+GAHFFSPAHVM L EI+RT+ T QV++D + + K IK
Sbjct: 403 TNTSTIDITKVAQKMKNPERIVGAHFFSPAHVMQLFEIIRTDITPPQVLVDTLGLSKQIK 462
Query: 478 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGY 537
K PVVVGNCTGFAVNR FFPY+ SA LL+ LG D + ID+AIR FG+PIGPF+L DL G+
Sbjct: 463 KTPVVVGNCTGFAVNRVFFPYTMSACLLLDLGCDPYAIDNAIRMFGMPIGPFRLGDLVGH 522
Query: 538 GVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPS-VLPI 596
V A F + FP+R ++ ++ L+ S R G+ +G G Y + KG PDP + P+
Sbjct: 523 DVGVAVGSNFIEDFPERVYRCAMIPSLVASKRLGEKSGSGFYVH-KGKTSLPDPEGIAPL 581
Query: 597 IEECR-RLSNIMPGG------KPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
+ R + +P ++T+ +IVEMI FPVVNE+CR L EG+VVRA DLD
Sbjct: 582 LAASRANARSQLPASAFAADAPLAALTQSDIVEMIFFPVVNEACRCLAEGVVVRAGDLDT 641
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLS- 708
A++LGM FP +RGGIV WAD+VGA + L++WS YG ++P +LE+ A +G LS
Sbjct: 642 AAILGMGFPPFRGGIVHWADSVGAKRIADRLREWSTRYGGIYQPCPYLEDCAVQGRTLSE 701
Query: 709 APVSSSSTSR 718
P+ S+
Sbjct: 702 GPIKGPDRSK 711
>gi|302834984|ref|XP_002949054.1| hypothetical protein VOLCADRAFT_74021 [Volvox carteri f.
nagariensis]
gi|300265799|gb|EFJ49989.1| hypothetical protein VOLCADRAFT_74021 [Volvox carteri f.
nagariensis]
Length = 732
Score = 642 bits (1655), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/719 (50%), Positives = 486/719 (67%), Gaps = 16/719 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+ GVAIITL PP+NAL ++ L D+ A + V+AIV+TG G F GFDIN FQ
Sbjct: 13 DGGVAIITLNYPPLNALHPLLLRSLFDQLRRAHADPAVRAIVVTGANGNFCAGFDINQFQ 72
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
AG + + + + ++E KP VAA++G+ALGGGLE+AMGC+AR+A P T+L
Sbjct: 73 N-PSAGAGGGIDNKINDAICEVLEGGAKPTVAAIQGVALGGGLEMAMGCNARVAVPGTKL 131
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
GLPEL LG+IPG TQRLPRLVGL+KA EMML S I +E G KLGL+DA+ +++LL
Sbjct: 132 GLPELQLGIIPGFGGTQRLPRLVGLAKAAEMMLTSTPIKAEAGLKLGLVDALAPADQLLA 191
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 248
++ ALDIA +KP + SL RTDKL L EA VL +AR +A K A + Q CL+ I
Sbjct: 192 AAKSLALDIAEGKKPRMYSLTRTDKLPPLGEALAVLDMARAEASKRARGLRHPQLCLNAI 251
Query: 249 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDI-GLKPRGVRK 307
+ GI +GG +G+ E F E LDT + LVH+FFAQR+T KV VTD+ GLKPR +R
Sbjct: 252 QAGIENGGAAGLAAEGAAFAEAASLDTHKALVHIFFAQRSTKKVKGVTDVPGLKPRPIRC 311
Query: 308 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 367
VAV+GGGLMGSGIATA +L + V+LKEVN +L G+ I++N++ V +G ++ D A
Sbjct: 312 VAVLGGGLMGSGIATALVLAGVDVILKEVNQNFLDGGMGRIKSNLQSRVKKGAMSADAAT 371
Query: 368 NALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 427
AL +KG LDY++F DMVIEAVIE + LKQ+IF++LE+ C P IL+TNTSTID+++
Sbjct: 372 AALARVKGALDYNDFGGADMVIEAVIEDIGLKQRIFADLERVCRPDAILSTNTSTIDIDL 431
Query: 428 VGEK-----TSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 482
VG K S R++GAHFFSPAHVMPLLEIVRT RT AQ +LD + + IKK PVV
Sbjct: 432 VGAKMEDGGAKSASRLLGAHFFSPAHVMPLLEIVRTSRTGAQALLDTLALSTRIKKTPVV 491
Query: 483 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRS-FGLPIGPFQLLDLAGYGVAA 541
VGNCTGFAVNR FFPY+ SA LL LG++ +RID+ + FG+P+GPF+L DL G +
Sbjct: 492 VGNCTGFAVNRVFFPYTMSAVLLADLGMNPYRIDATVAGKFGMPMGPFRLNDLVGSDIGL 551
Query: 542 ATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYE-KGSKPKPDPSVLPIIEEC 600
F +FP+R + S L+ LL ++ R G+ GKG Y ++ K K PDP + P+++E
Sbjct: 552 HVGANFVTSFPERVYVSRLIPLLNEAKRLGEKTGKGFYKFDAKTRKASPDPELAPLLDES 611
Query: 601 RRLSNIMP-GGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPS 659
R+ + ++ G KP ++++ +I++ I FPVVNE CRV+ EGIV + +DLD ASV+ M FP+
Sbjct: 612 RKAAALVKEGAKPPALSDADILDFIFFPVVNEGCRVVAEGIVDKPADLDVASVMAMGFPA 671
Query: 660 YRGGIVFWADAVGANYVYTSLKKWSQL---YGNFFKPSRFLEERATKGIPLSAPVSSSS 715
RGG++FWAD VGA + L++++ L + FF P +L + A G LSA V + S
Sbjct: 672 VRGGLIFWADLVGAKRIVARLRQFAALVPQHAGFFAPCEYLVQAAESGRKLSAGVPAPS 730
>gi|424513537|emb|CCO66159.1| predicted protein [Bathycoccus prasinos]
Length = 730
Score = 598 bits (1543), Expect = e-168, Method: Compositional matrix adjust.
Identities = 337/724 (46%), Positives = 463/724 (63%), Gaps = 20/724 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
N VAIITL NPPVNALA+ ++ ++ + A D + AIVL G G FSGGFDI
Sbjct: 13 NQNVAIITLKNPPVNALALSLLRSFRENVQSAQDDDAIDAIVLRGENGIFSGGFDIAHLG 72
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K + D + E++ L+E+ KKP VAA+ LALGGGLE++M C AR+A +L
Sbjct: 73 KTTRGEKTENVSDFN-EILTRLVENGKKPCVAAISNLALGGGLEVSMACAARVATRGAKL 131
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE---- 184
GLPEL LGVIPG TQRLPRLVGL K++EMML SK ITSEEG +LGL+D VV +
Sbjct: 132 GLPELKLGVIPGFGGTQRLPRLVGLEKSLEMMLQSKEITSEEGARLGLVDEVVEDDGKSG 191
Query: 185 ---ELLKVSRLWALDIAARRKPWIRSLHRTDKL-GSLSEAREVLKLARLQAKKTAPNMPQ 240
+++ + A IA K SL RTDKL + ++ +A +AKK +P
Sbjct: 192 NDRAVVEAAVRVAKRIANGEKQRQFSLTRTDKLPRDAKQTMGIMAVAEGKAKKIKAVLPH 251
Query: 241 HQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGL 300
C++ ++ G+ G G+ KE+++F++ V ++GLVH FFA RAT+ VP +TD L
Sbjct: 252 ASYCVEAVKVGLEKGSAEGLRKESEMFQKAVKSPAAKGLVHFFFASRATASVPGITDQKL 311
Query: 301 KPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGK 360
+P V+ V V+GGGLMGSGIATA +L+ + VVLKE+ E+L GI+ IEAN+ +V +GK
Sbjct: 312 RPSEVKSVGVVGGGLMGSGIATACLLSGMEVVLKEIKPEFLQAGIQRIEANIGSMVKKGK 371
Query: 361 LTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 420
+ +KA + ++G LD +F +VDMVIEAVIE++ LK+KIFS LE P CIL+TNT
Sbjct: 372 MKPEKAKAIVGRVRGTLDDRDFANVDMVIEAVIENLDLKRKIFSTLESIVKPSCILSTNT 431
Query: 421 STIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVP 480
STI + + + +R+IGAHFFSPAHVM L EI+R ++T Q+++D + K IKK P
Sbjct: 432 STISIAKCASEMRNPERLIGAHFFSPAHVMQLFEIIRVDQTPPQILVDTLAFSKKIKKTP 491
Query: 481 VVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVA 540
VVVGNCTGF VNR FFPY+ SA +LV LG D + ID I FG+P+GPF+L DL G V
Sbjct: 492 VVVGNCTGFCVNRVFFPYTMSATVLVDLGCDPYAIDRVISMFGMPMGPFRLADLVGMEVG 551
Query: 541 AATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPD-PSVLPIIEE 599
K F + FP+R ++SPL+ LL + R G+ G Y+Y+ K PD ++ P IE
Sbjct: 552 VHVGKNFIEDFPERVYESPLIPSLLDAKRLGEKTKSGFYSYDDRRKASPDMDAIAPFIEN 611
Query: 600 CRRLSNIMPGGKP--ISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSF 657
R+ + G P + + ++IVEMI FPVVNE+CRVL+EG+ V+A+D+D ASVLGM F
Sbjct: 612 ARKNRKVPLPGHPEQLGFSAQDIVEMIFFPVVNEACRVLDEGVAVKAADVDVASVLGMGF 671
Query: 658 PSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSAPVSSSSTS 717
P +RGGI+ WAD +GA +Y L ++ + YG ++P +L A +G + + +
Sbjct: 672 PPFRGGILHWADQMGAKKIYARLTEFGKKYGGLYEPCAYLTNCAHQGKTI-----AEGPN 726
Query: 718 RARL 721
RARL
Sbjct: 727 RARL 730
>gi|413925843|gb|AFW65775.1| hypothetical protein ZEAMMB73_546088 [Zea mays]
Length = 407
Score = 591 bits (1524), Expect = e-166, Method: Compositional matrix adjust.
Identities = 272/407 (66%), Positives = 339/407 (83%), Gaps = 1/407 (0%)
Query: 316 MGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG 375
MGSGIAT+ +++NI VVLKEVN ++L +G KTI N+ GLV RG LT+D+ + A+ +LKG
Sbjct: 1 MGSGIATSLLVSNISVVLKEVNPQFLQRGEKTIAGNLEGLVKRGSLTKDRMHKAMALLKG 60
Query: 376 VLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQ 435
LDYS+FKDVDMVIEAVIE +PLKQ IF+++EK CP HCILATNTSTIDLN+VG+KT+SQ
Sbjct: 61 ALDYSDFKDVDMVIEAVIEKIPLKQSIFADIEKICPKHCILATNTSTIDLNVVGKKTNSQ 120
Query: 436 DRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAF 495
DRIIGAHFFSPAH+MPLLEIVRTE+TS Q ILDL+T+GKIIKKVP+VVGNCTGFAVN F
Sbjct: 121 DRIIGAHFFSPAHIMPLLEIVRTEKTSPQAILDLITIGKIIKKVPIVVGNCTGFAVNLTF 180
Query: 496 FPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRS 555
FPY+Q + LLVSLG+DVFRID I +FG+P+GPFQL D+AGYGVA A + AF +R+
Sbjct: 181 FPYTQGSHLLVSLGIDVFRIDRVISTFGMPMGPFQLQDVAGYGVALAVKDIYADAFGERN 240
Query: 556 FQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISV 615
S LVDL++K GR GK NGKG Y YEKG KPKPDPSV +IEE R+ +N MPGGKP+++
Sbjct: 241 LDSDLVDLMVKDGRQGKVNGKGYYIYEKGGKPKPDPSVKHVIEEYRKHANTMPGGKPVTL 300
Query: 616 TEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANY 675
T+++I+EMI FPVVNE+CRV++E +V+RASDLD ASVLGM FP YRGG+VFWAD VGA Y
Sbjct: 301 TDQDILEMIFFPVVNEACRVMDENVVIRASDLDIASVLGMGFPKYRGGLVFWADTVGAPY 360
Query: 676 VYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSAP-VSSSSTSRARL 721
+++ L KW+++YG FFKPS +LE+RA G+PLSAP S ++R+R+
Sbjct: 361 IHSKLSKWAEIYGPFFKPSSYLEQRAKSGVPLSAPGASQQGSARSRM 407
>gi|413948032|gb|AFW80681.1| hypothetical protein ZEAMMB73_867373 [Zea mays]
Length = 460
Score = 588 bits (1517), Expect = e-165, Method: Compositional matrix adjust.
Identities = 270/461 (58%), Positives = 358/461 (77%), Gaps = 3/461 (0%)
Query: 261 LKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGI 320
++EA F+EL+ DT + LVHVFF+QRATSK+P TD+GL PR + KVA++GGGLMGSGI
Sbjct: 3 MQEATSFQELLFSDTCKSLVHVFFSQRATSKIPGATDLGLMPRKITKVAILGGGLMGSGI 62
Query: 321 ATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS 380
ATA +L+N V+LKEVN ++L GI I+AN++ V +GK+T+++ A+ ++ GVLDY
Sbjct: 63 ATAMVLSNYPVLLKEVNEKFLTAGINRIQANLQSRVKKGKMTEERYEKAMSLVTGVLDYE 122
Query: 381 EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIG 440
FKDVD+VIEAVIE+V LKQ+IFS+LEK CP HCILATNTSTIDLN++GEKT +QDRI G
Sbjct: 123 RFKDVDLVIEAVIENVKLKQQIFSDLEKYCPSHCILATNTSTIDLNLIGEKTKAQDRIAG 182
Query: 441 AHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQ 500
AHFFSPAHVMPLLEIVRT+ TS QV++DL+ VGK IKK P+VVGNCTGFAVNR FFPY+Q
Sbjct: 183 AHFFSPAHVMPLLEIVRTQHTSPQVVVDLLDVGKKIKKTPIVVGNCTGFAVNRMFFPYTQ 242
Query: 501 SARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPL 560
SA V LG+DV++ID A FG+P+GPF+L DL G+GVA AT ++ + FP+R ++S L
Sbjct: 243 SALFYVDLGMDVYKIDRACTKFGMPMGPFRLADLVGFGVAVATGMQYLENFPERVYKSML 302
Query: 561 VDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEI 620
+ L+++ R G+A KG Y YE K PDP ++ IE+ R ++ + P + + ++EK+I
Sbjct: 303 LPLMMEGNRAGEATQKGFYKYEGKRKATPDPEIMKYIEKSRSMAGVTPDPELMKLSEKDI 362
Query: 621 VEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSL 680
VEM+ FPV+NE+CRVL+EGI V+ASDLD AS+ GM FP YRGG++ WAD++GA Y++ L
Sbjct: 363 VEMVFFPVINEACRVLDEGIAVKASDLDIASIFGMGFPPYRGGVMHWADSIGAKYIHGKL 422
Query: 681 KKWSQLYGNFFKPSRFLEERATKGIPLSAPVSSSSTSRARL 721
++W++ YG FFKP +L ERA KGIPLSAP + +ARL
Sbjct: 423 EEWTKRYGGFFKPCSYLAERAAKGIPLSAP---TKKVQARL 460
>gi|62320284|dbj|BAD94583.1| AIM1 protein [Arabidopsis thaliana]
Length = 399
Score = 582 bits (1499), Expect = e-163, Method: Compositional matrix adjust.
Identities = 295/392 (75%), Positives = 348/392 (88%), Gaps = 3/392 (0%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
VTMEVGNDGVA+IT+ NPPVN+LA PI++GLK+KF +A R+DVKAIVL GN GRFSGGF
Sbjct: 7 VTMEVGNDGVAVITISNPPVNSLASPIISGLKEKFRDANQRNDVKAIVLIGNNGRFSGGF 66
Query: 66 DINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA 125
DINVFQ+VH GD+SLMP+VSVELV NL+ED +KP+VAAVEGLALGGGLELAM CHAR+A
Sbjct: 67 DINVFQQVHKTGDLSLMPEVSVELVCNLMEDSRKPVVAAVEGLALGGGLELAMACHARVA 126
Query: 126 APKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 182
APK QLGLPELTLGVIPG TQRLPRLVGL+KA +M+LLSKSI+SEEG KLGLIDA+V
Sbjct: 127 APKAQLGLPELTLGVIPGFGGTQRLPRLVGLAKATDMILLSKSISSEEGHKLGLIDALVP 186
Query: 183 SEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQ 242
++L SR WALDIA RKP+++SLHRTDK+GSLSEAR +LK +R AKK APNMPQH
Sbjct: 187 PGDVLSTSRKWALDIAEERKPFLQSLHRTDKIGSLSEARAILKNSRQLAKKIAPNMPQHH 246
Query: 243 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 302
AC++VIEEGI+HGGYSGVLKEA+VFK+LV+ DT++GLVHVFFAQRATSKVPNVTD+GLKP
Sbjct: 247 ACIEVIEEGIIHGGYSGVLKEAEVFKQLVLSDTAKGLVHVFFAQRATSKVPNVTDVGLKP 306
Query: 303 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 362
R ++KVAVIGGGLMGSGIATA +L+NI VVLKE+NSE+L+KGIK++EAN++ LV+RGKLT
Sbjct: 307 RPIKKVAVIGGGLMGSGIATALLLSNIRVVLKEINSEFLMKGIKSVEANMKSLVSRGKLT 366
Query: 363 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIE 394
QDKA AL + KGVLDY+EF DVDMVIE ++
Sbjct: 367 QDKAGKALSLFKGVLDYTEFNDVDMVIEVCLQ 398
>gi|118488579|gb|ABK96102.1| unknown [Populus trichocarpa]
Length = 335
Score = 569 bits (1466), Expect = e-159, Method: Compositional matrix adjust.
Identities = 268/321 (83%), Positives = 294/321 (91%)
Query: 387 MVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSP 446
MVIEAVIESVPLKQKIFSE+EK CPPHCILATNTSTIDLN+VGEKTSSQDRIIGAHFFSP
Sbjct: 1 MVIEAVIESVPLKQKIFSEIEKICPPHCILATNTSTIDLNLVGEKTSSQDRIIGAHFFSP 60
Query: 447 AHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLV 506
AH+MPLLEIVRTE+TSAQ ILDLMTVGK IKKVPVVVGNCTGFAVNRAFFPY+QSA +LV
Sbjct: 61 AHIMPLLEIVRTEKTSAQAILDLMTVGKTIKKVPVVVGNCTGFAVNRAFFPYTQSALILV 120
Query: 507 SLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLK 566
LGVDVFRID I SFGLP+GP+QL DL+GYGVA A KEF AFPDR+FQSPL+ LL+K
Sbjct: 121 HLGVDVFRIDKLISSFGLPMGPYQLQDLSGYGVALAVEKEFANAFPDRTFQSPLIHLLVK 180
Query: 567 SGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILF 626
SGRNGK NGKG Y YEKGSKP+PDPSVLPIIEE RRL+NIMP GKPI++T+KEIVEM+LF
Sbjct: 181 SGRNGKTNGKGYYIYEKGSKPRPDPSVLPIIEESRRLANIMPNGKPINITDKEIVEMVLF 240
Query: 627 PVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL 686
PVVNE+CRVL+EG+VVRASDLD ASVLGMSFPSYRGGIVFWAD VG +VY SLKKWSQ
Sbjct: 241 PVVNEACRVLDEGVVVRASDLDTASVLGMSFPSYRGGIVFWADLVGPKHVYDSLKKWSQR 300
Query: 687 YGNFFKPSRFLEERATKGIPL 707
+G+F+KPS+FLEERAT GIPL
Sbjct: 301 FGDFYKPSKFLEERATGGIPL 321
>gi|449532298|ref|XP_004173119.1| PREDICTED: LOW QUALITY PROTEIN: glyoxysomal fatty acid
beta-oxidation multifunctional protein MFP-a-like,
partial [Cucumis sativus]
Length = 459
Score = 567 bits (1460), Expect = e-158, Method: Compositional matrix adjust.
Identities = 268/460 (58%), Positives = 353/460 (76%), Gaps = 3/460 (0%)
Query: 262 KEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIA 321
+E + F+ L+ DTS+ L+HVF +QR T+KVP V+D+GL PR + KVAVIGGGLMGSGIA
Sbjct: 3 QEIEDFQVLLHADTSKSLIHVFLSQRGTTKVPGVSDLGLTPRRINKVAVIGGGLMGSGIA 62
Query: 322 TAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE 381
TA IL+N V+LKEVN ++L G+ ++AN++ V +G +T +K + +LKGVLDY
Sbjct: 63 TALILSNYPVILKEVNEKFLEAGLGRVKANLQSRVRKGTMTPEKFERTISLLKGVLDYES 122
Query: 382 FKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGA 441
FKDVDMVIEAVIE++ LKQ+I +LEK CPPHCILATNTSTIDL+++GEKT+S DRI+GA
Sbjct: 123 FKDVDMVIEAVIENISLKQQIIVDLEKYCPPHCILATNTSTIDLDLIGEKTNSHDRIVGA 182
Query: 442 HFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQS 501
HFFSPAHVMPLLE+VR RT+ QVI+DL+ V K IKK PVVVGNCTGFAVNR FFPY+Q+
Sbjct: 183 HFFSPAHVMPLLEVVRXNRTAPQVIVDLVDVEKRIKKTPVVVGNCTGFAVNRMFFPYTQA 242
Query: 502 ARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLV 561
A LLV GVD ++ID AI FG+P+GPF+L+DL G+GVA AT +F + FPDR+F+S ++
Sbjct: 243 ALLLVEHGVDPYQIDRAIYKFGMPMGPFRLIDLVGFGVAIATGGQFVQNFPDRTFKSMII 302
Query: 562 DLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIV 621
L+ + R G+ KG Y Y+K K KPDP + IE+ R +S I K +++K+I+
Sbjct: 303 PLMQEDKRAGETTQKGFYLYDKNRKSKPDPELKKYIEKARSMSGISVDPKLAKISDKDII 362
Query: 622 EMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLK 681
EMI FPVVNE+CRVL EGI V+A+DLD A V+GM FP YRGG++FWAD++G+ Y+Y+ L+
Sbjct: 363 EMIFFPVVNEACRVLAEGIAVKAADLDIAGVMGMGFPPYRGGVMFWADSLGSKYIYSRLE 422
Query: 682 KWSQLYGNFFKPSRFLEERATKGIPLSAPVSSSSTSRARL 721
+WS+LYG FFKP +L ERA +G LS+P S +++RL
Sbjct: 423 EWSKLYGGFFKPCAYLAERAAQGSTLSSP---SVVTKSRL 459
>gi|222622587|gb|EEE56719.1| hypothetical protein OsJ_06221 [Oryza sativa Japonica Group]
Length = 448
Score = 560 bits (1444), Expect = e-157, Method: Compositional matrix adjust.
Identities = 296/424 (69%), Positives = 346/424 (81%), Gaps = 5/424 (1%)
Query: 3 APRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFS 62
A RVTMEVG DGVA++T+ NPPVNAL I+ GLK+K+ EA RDDVKAIVLTG GG+F
Sbjct: 4 AIRVTMEVGADGVAVVTICNPPVNALHPIIIQGLKEKYAEAMDRDDVKAIVLTGAGGKFC 63
Query: 63 GGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHA 122
GGFDINVF +VH G+VSLMPDVSVELV NL+E KKP VAA++GLALGGGLEL MGCHA
Sbjct: 64 GGFDINVFTEVHKTGNVSLMPDVSVELVSNLMEAGKKPSVAAIQGLALGGGLELTMGCHA 123
Query: 123 RIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDA 179
RI+ P+ QLGLPELTLG+IPG TQRLPRLVGL KAIEMML SK IT++EG + GL+DA
Sbjct: 124 RISTPEAQLGLPELTLGIIPGFGGTQRLPRLVGLPKAIEMMLQSKFITAKEGKEGGLVDA 183
Query: 180 VVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMP 239
+ + +EL+K+SRLWAL+IA RKPWIRSL RTD+LGSLSEAR VL AR QAKK A N+P
Sbjct: 184 LCSPDELIKMSRLWALEIANYRKPWIRSLARTDRLGSLSEARSVLNSARQQAKKVAANLP 243
Query: 240 QHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIG 299
QHQACLDV+EEG++ GG++GVLKEAKVFKELV+ TS+ LVH FFAQR T+KVP VTD+
Sbjct: 244 QHQACLDVMEEGVLCGGHAGVLKEAKVFKELVLSPTSKALVHAFFAQRLTTKVPGVTDVQ 303
Query: 300 LKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRG 359
LKPR +RKVAVIGGGLMGSGIATA +++N VVLKEVN ++L +G K I AN+ GLV RG
Sbjct: 304 LKPRKIRKVAVIGGGLMGSGIATALLVSNTSVVLKEVNPQFLQRGQKMIAANLEGLVKRG 363
Query: 360 KLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATN 419
LT+DK N A+ +LKG LDYS+FKDVDMVIEAVIE +PLKQ IFS+LEK H L T
Sbjct: 364 SLTKDKMNKAMSLLKGALDYSDFKDVDMVIEAVIEKIPLKQSIFSDLEKCM--HTTLHTC 421
Query: 420 TSTI 423
I
Sbjct: 422 NKHI 425
>gi|452820125|gb|EME27172.1| peroxisomal fatty acid beta-oxidation multifunctional protein
[Galdieria sulphuraria]
Length = 1153
Score = 559 bits (1441), Expect = e-156, Method: Compositional matrix adjust.
Identities = 323/731 (44%), Positives = 454/731 (62%), Gaps = 42/731 (5%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
V + V N GVA+I+ NPPVNAL+ P+ L +K ++A R DVKAIVL G G FSGG
Sbjct: 7 VELNVDNQGVALISFSNPPVNALSNPLSQSLFEKLKQAYERPDVKAIVLFGKNGVFSGGA 66
Query: 66 DINVFQKVHGAGDVSLMP-DVSVEL-VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
DI F ++ D P DV V+ + ++E+ KP VAA+ G+A GGGLE+ + C R
Sbjct: 67 DITEFAALY---DPKASPKDVEVKAHIFQMLEEGSKPTVAAINGVAFGGGLEMILCCQER 123
Query: 124 IAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAV 180
+ + LPEL +G+IPG TQRLPR++GL A+ +ML +K + +E KLGL+ A+
Sbjct: 124 VGTKRASFTLPELRIGLIPGLGGTQRLPRVIGLEAALPVMLQTKVLKGQEANKLGLLAAL 183
Query: 181 VT-SEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLAR--LQAKKTAPN 237
V EELL ++ AL+IA + L RTDKLGS + ++ + AR L K
Sbjct: 184 VDGEEELLATAKKVALEIAQGLRERKNHLKRTDKLGSPEQWNKIEQFARSELSKSKMIKG 243
Query: 238 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 297
PQ+Q CL+ I G+ +GG +G+ E + F+ELV T++ L+HVFFA RATSK+ +
Sbjct: 244 QPQYQECLETIMYGVRNGGEAGLQYERRKFRELVSSPTAKSLIHVFFATRATSKLDAIPG 303
Query: 298 IGLKPRGV--RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGL 355
+ + +G +K AV+GGGLMGSGIAT+ + I VV+KEV+ ++ IEAN+
Sbjct: 304 VSTEYKGKLPKKCAVVGGGLMGSGIATSILACGIPVVVKEVDEQFAKAARTRIEANLESF 363
Query: 356 VTRGKLTQDKANNALKMLKGVLDYSE-FKDVDMVIEAVIESVPLKQKIFSELEKACPPHC 414
R KL+Q+ NNA ++L ++ + F+DVD+VIEA IE V LKQ+IF+ L K P C
Sbjct: 364 RKRSKLSQEALNNAKRILTVTTEFDDKFRDVDLVIEAAIEDVRLKQEIFATLGKLVKPDC 423
Query: 415 ILATNTSTIDLNIVGE---KTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMT 471
ILATNTS+ID++++ K + + R++GAHFFSPAH+M LLEIVR RTSA+VI DL+T
Sbjct: 424 ILATNTSSIDIDLIATACPKATEEGRVVGAHFFSPAHIMQLLEIVRINRTSARVIQDLVT 483
Query: 472 VGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVS-LGVDVFRIDSAIRSFGLPIGPFQ 530
+GK + K P+VVGNC GFAVNR +FP S + +LV+ LG+ +RID FGLP+GPF+
Sbjct: 484 LGKKMGKTPIVVGNCVGFAVNRMYFPQSNVSDILVTYLGLCPYRIDQVAEEFGLPMGPFK 543
Query: 531 LLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK--PK 588
L DL G+ V+ A + A+ DR F+S L+ +++ GR G+ +G G Y Y S+ K
Sbjct: 544 LRDLVGFDVSVAVGGVAEVAYADRVFRSSLLKSMIEKGRKGQKSGAGFYRYSSQSRQPQK 603
Query: 589 PDPSVLPIIE----ECRRLSNIMPGGKP-----ISVTEKEIVEMILFPVVNESCRVLEEG 639
+ SV IE E R+ ++ + P ++ + +I++M++ PVVNE RVLEEG
Sbjct: 604 DEESVKSFIEAASKEVRQTASKLDIRAPEQSFIQNIKDNDIIDMLILPVVNEGMRVLEEG 663
Query: 640 IVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEE 699
I RASDLD ASVLGM FP+Y+GGI+FWA + + LK+ LY
Sbjct: 664 ISQRASDLDIASVLGMGFPAYKGGIMFWAQSQ-FGHSGAILKRLDYLY------------ 710
Query: 700 RATKGIPLSAP 710
RAT P+ AP
Sbjct: 711 RATGNCPMFAP 721
>gi|255551799|ref|XP_002516945.1| 3-hydroxyacyl-CoA dehyrogenase, putative [Ricinus communis]
gi|223544033|gb|EEF45559.1| 3-hydroxyacyl-CoA dehyrogenase, putative [Ricinus communis]
Length = 541
Score = 556 bits (1432), Expect = e-155, Method: Compositional matrix adjust.
Identities = 270/438 (61%), Positives = 341/438 (77%)
Query: 136 LTLGVIPGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWAL 195
+ LG GTQRLPRLVG++KA+EMML SK + EE LGL+DA+V+ EL+ +R WAL
Sbjct: 1 MDLGPHLGTQRLPRLVGITKALEMMLTSKPVKGEEAHALGLVDALVSPNELVTTARRWAL 60
Query: 196 DIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHG 255
D+ RKPW+ SL++T+KL SL EARE+ K AR QA+K APN+ C+DV+EEGIV G
Sbjct: 61 DMLEGRKPWVASLYKTEKLDSLGEAREIFKFARAQARKQAPNLKHPLVCIDVVEEGIVSG 120
Query: 256 GYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGL 315
+G+ KEA+ F+ LV +T + LVH+FFAQR T+KVP +TD GL PR V KVAV+GGGL
Sbjct: 121 PRAGIWKEAEEFQVLVKSNTCKSLVHIFFAQRGTTKVPGITDKGLIPRRVNKVAVLGGGL 180
Query: 316 MGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG 375
MGSGIATA IL+N V+LKEVN ++L GI + AN++ V +GK++Q+K L +LKG
Sbjct: 181 MGSGIATALILSNYPVILKEVNQQFLDAGINRVRANLQSRVKKGKMSQEKFEKTLSLLKG 240
Query: 376 VLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQ 435
VLDY FKDVDMVIEAVIE+V LKQ+IF++LEK CPPHCILA+NTSTIDLN++G+KT SQ
Sbjct: 241 VLDYESFKDVDMVIEAVIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGQKTRSQ 300
Query: 436 DRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAF 495
DRIIGAHFFSPAH+MPLLEIVRT +TSAQ I+DL+ VGK I+K PVVVGNCTGFAVNR F
Sbjct: 301 DRIIGAHFFSPAHIMPLLEIVRTNQTSAQAIVDLLDVGKKIRKTPVVVGNCTGFAVNRMF 360
Query: 496 FPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRS 555
FPY+Q+A LLV G D ++ID AI FG+P+GPF+L DL G+GVA AT +F + FP+R+
Sbjct: 361 FPYTQAAILLVEHGTDPYQIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERT 420
Query: 556 FQSPLVDLLLKSGRNGKA 573
++S L+ LL + R G A
Sbjct: 421 YKSMLIPLLQEDKRAGIA 438
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 63/84 (75%), Gaps = 3/84 (3%)
Query: 624 ILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKW 683
+L P++ E R GI V+A+DLD ASV+GM FP YRGGI+FWAD++G+ Y+Y+ L++W
Sbjct: 424 MLIPLLQEDKRA---GIAVKAADLDIASVMGMGFPPYRGGILFWADSLGSKYIYSRLEEW 480
Query: 684 SQLYGNFFKPSRFLEERATKGIPL 707
+++YG FFKP FL ERA KG L
Sbjct: 481 TKIYGEFFKPCDFLAERAAKGASL 504
>gi|115463427|ref|NP_001055313.1| Os05g0362100 [Oryza sativa Japonica Group]
gi|54287655|gb|AAV31399.1| putative glyoxysomal fatty acid beta-oxidation multifunctional
protein [Oryza sativa Japonica Group]
gi|113578864|dbj|BAF17227.1| Os05g0362100 [Oryza sativa Japonica Group]
gi|215712327|dbj|BAG94454.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 465
Score = 506 bits (1303), Expect = e-140, Method: Compositional matrix adjust.
Identities = 248/451 (54%), Positives = 333/451 (73%), Gaps = 6/451 (1%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR 60
MA ++EV DGVA+IT+ NPPVNAL++ ++A L+ + EA R DVKAIVLTG GR
Sbjct: 1 MARGSTSVEVRRDGVAVITVSNPPVNALSLDVIASLQRDYGEALRRSDVKAIVLTGAKGR 60
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
FSGGFDIN F K + S++ + +++ED KP VAA++G+ALGGGLEL M C
Sbjct: 61 FSGGFDINAFDKKPKNEKPGYL---SIDFLTDIVEDAPKPSVAAIDGVALGGGLELVMVC 117
Query: 121 HARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 177
HAR++ QLGLPEL LG+IPG TQRLPRLVGL KA+EM+L+SK + E K GL+
Sbjct: 118 HARVSTSSAQLGLPELQLGIIPGLGGTQRLPRLVGLPKALEMLLMSKPLKGVEAHKFGLV 177
Query: 178 DAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 237
DAVV+++EL+ + WAL+I ++PW RSLHRTD+L +L E +++L AR+QA+K + +
Sbjct: 178 DAVVSADELISTACSWALEIVEDKRPWFRSLHRTDRLPALEETKKILNFARVQAQKQSAS 237
Query: 238 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 297
+ C+DVIEEGI+ G +G++KE K L M S+ L HVFFAQRATSK+PN++
Sbjct: 238 LQHPLVCIDVIEEGIISGPRAGLMKETLCGKMLEMSQISKSLRHVFFAQRATSKIPNISI 297
Query: 298 IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 357
+GL PR + KVA++GGGLMGSGIATA I NN+ V+LKEVN ++L GI ++AN++ LV
Sbjct: 298 LGLTPRRIHKVAIVGGGLMGSGIATALISNNLLVILKEVNEQFLDAGISRVKANLQSLVK 357
Query: 358 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 417
RG++T++ N L +L GVLDY +F++ D+VIEAVIE + LKQKIF++LEK C +CILA
Sbjct: 358 RGQMTKEDYENKLSLLSGVLDYEQFREADVVIEAVIEDLSLKQKIFADLEKYCHSNCILA 417
Query: 418 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAH 448
TNTSTIDL+++G+KTS QDRI GAHFFSP +
Sbjct: 418 TNTSTIDLHLIGQKTSCQDRIAGAHFFSPCN 448
>gi|159482618|ref|XP_001699366.1| hypothetical protein CHLREDRAFT_132158 [Chlamydomonas reinhardtii]
gi|158273002|gb|EDO98796.1| predicted protein [Chlamydomonas reinhardtii]
Length = 705
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 310/729 (42%), Positives = 417/729 (57%), Gaps = 59/729 (8%)
Query: 4 PRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSG 63
P V DGVA+ITL PP+NAL ++ L + A + VKA+VLTG F
Sbjct: 5 PEAQYRVDPDGVAVITLNYPPLNALHPLLLRSLFEALRRAHADPAVKAVVLTGANNNFCA 64
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
GFDI+ FQ AG + + + + +E KP+VAAV+G+ALGGGLE+AMGC+AR
Sbjct: 65 GFDISQFQNPD-AGSGGGIDNSINDAICKYLEGGAKPVVAAVQGVALGGGLEVAMGCNAR 123
Query: 124 IAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAV 180
+A T+LGLPELTLG+IPG TQRLPRLVGL+K EMML S I +E G+
Sbjct: 124 VAVRGTKLGLPELTLGIIPGFGGTQRLPRLVGLAKGCEMMLTSAPIKAEGREGRGIPALF 183
Query: 181 VTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQ 240
+ + +P + + DKL L EA +L +AR +A + A +
Sbjct: 184 RCPPPPYHSPLPLPPFLHSLHRPSLSTPSPPDKLPPLGEALALLDMARAEAGRRARGLAH 243
Query: 241 HQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDI-G 299
Q CLD ++ G+ GG G+ E + F LDT + LVH+FFAQRAT KV VTD+ G
Sbjct: 244 PQLCLDAVQAGVERGGQEGLAAEGRAFAAAAALDTHKALVHIFFAQRATKKVKGVTDVPG 303
Query: 300 LKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRG 359
LKPR +R VAV+GGGLMGSGIATA L + V+LKEV +G
Sbjct: 304 LKPRPIRCVAVLGGGLMGSGIATALALAGVEVILKEVK--------------------KG 343
Query: 360 KLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATN 419
++Q A+ AL + G LDY+ F DMVIEAVIE +PLKQKIF++LEKAC P IL+TN
Sbjct: 344 AMSQAAADAALGRVSGALDYAGFARADMVIEAVIEDIPLKQKIFADLEKACRPDAILSTN 403
Query: 420 TSTIDLNIVGEKTS----SQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKI 475
TSTID+ +VG K S ++ R++GAHFFSPAH+MPLLEIVRT+ T AQV
Sbjct: 404 TSTIDIELVGAKMSGGAAARRRLLGAHFFSPAHIMPLLEIVRTKDTGAQV---------- 453
Query: 476 IKKVPVVVGNC-TGFAVNRAFFPYSQSARLLVSLGVD----------VFRIDSAIRSFGL 524
G C G RA +++ L+ + D + A
Sbjct: 454 -----GAWGACGRGLRGRRAVVEWARRGLLVEAHACDRTPQLENSRNTRWVTVATERITA 508
Query: 525 PIGP-FQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYE- 582
P+ P QL DL G + F +FPDR + S L+ L ++ R G+ GKG Y ++
Sbjct: 509 PVHPLLQLNDLVGSDIGLHVGANFVTSFPDRVYVSRLIPALNEAKRLGEKTGKGFYKFDA 568
Query: 583 KGSKPKPDPSVL-PIIEECRRLSNIMP-GGKPISVTEKEIVEMILFPVVNESCRVLEEGI 640
K K PDP L P++E RR + ++P G KP ++++++I++ I FPVVNE CRV+ EGI
Sbjct: 569 KTRKASPDPEGLAPLLEGSRREAALVPAGAKPPALSDQDILDWIFFPVVNEGCRVVAEGI 628
Query: 641 VVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEER 700
V +A+DLD ASV+ M FP RGG++FWAD VGA + LK+++ ++ FF P +L +
Sbjct: 629 VDKAADLDVASVMAMGFPPVRGGLIFWADLVGAPRIVARLKQFAAMHAGFFAPCDYLLQA 688
Query: 701 ATKGIPLSA 709
A G LSA
Sbjct: 689 AASGRKLSA 697
>gi|449472443|ref|XP_004153595.1| PREDICTED: glyoxysomal fatty acid beta-oxidation multifunctional
protein MFP-a-like, partial [Cucumis sativus]
Length = 356
Score = 476 bits (1226), Expect = e-131, Method: Compositional matrix adjust.
Identities = 226/356 (63%), Positives = 284/356 (79%)
Query: 144 TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKP 203
TQRLPRLVGL KA+EMML SK + EE + LGL+DA+V EEL+ +R WALDI+ RRKP
Sbjct: 1 TQRLPRLVGLPKALEMMLTSKPVKGEEAFSLGLVDAIVPREELISAARKWALDISERRKP 60
Query: 204 WIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKE 263
WI SLH+T+KL SL++ARE+ K AR Q +K APN+ C+DV+E G+V G +G+ KE
Sbjct: 61 WIISLHKTNKLESLADAREIFKFARAQVRKQAPNLKHPLVCIDVVETGVVSGPRAGLQKE 120
Query: 264 AKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATA 323
+ F+ L+ DTS+ L+HVFFAQR T+KVP V+D+GL PR + KVAVIGGGLMGSGIATA
Sbjct: 121 IEDFQVLLHADTSKSLIHVFFAQRGTTKVPGVSDLGLTPRRINKVAVIGGGLMGSGIATA 180
Query: 324 HILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 383
IL+N V+LKEVN ++L G+ ++AN++ V +G +T +K + +LKGVLDY FK
Sbjct: 181 LILSNYPVILKEVNEKFLEAGLGRVKANLQSRVRKGTMTPEKFERTISLLKGVLDYESFK 240
Query: 384 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHF 443
DVDMVIEAVIE++ LKQ+I +LEK CPPHCILATNTSTIDL+++GEKT+S DRI+GAHF
Sbjct: 241 DVDMVIEAVIENISLKQQIIVDLEKYCPPHCILATNTSTIDLDLIGEKTNSHDRIVGAHF 300
Query: 444 FSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYS 499
FSPAH+MPLLE+VRT RT+ QVI+DL+ VGK IKK PVVVGNCTGFAVNR FFPY+
Sbjct: 301 FSPAHIMPLLEVVRTNRTAPQVIVDLVDVGKRIKKTPVVVGNCTGFAVNRMFFPYT 356
>gi|449019169|dbj|BAM82571.1| fusion protein of glyoxysomal fatty acid oxidation tetrafunctional
protein, and acetyl-CoA acyltransferase [Cyanidioschyzon
merolae strain 10D]
Length = 1145
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 297/724 (41%), Positives = 419/724 (57%), Gaps = 47/724 (6%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR 60
M V+++ DGVAII PPVNAL++ + L + KAIVL G
Sbjct: 1 MTGESVSVQYQPDGVAIIVFSAPPVNALSVNLRRLLALNVANVVADRRAKAIVLYGGEST 60
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
FS G D+ F + G+ + + D E L+E KP VA + G ALGGGLELA+ C
Sbjct: 61 FSAGADVGEFPEKLGSAENIISLDT--EPFKTLLETSPKPTVACITGTALGGGLELALAC 118
Query: 121 HARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 177
H R+A +LGLPEL LG+IPG TQRLPRL+G+ A++M++ S+ I EE + GL+
Sbjct: 119 HFRVALSDAKLGLPELRLGLIPGLGGTQRLPRLIGVEPALDMIMHSRIIDGEEAHRCGLV 178
Query: 178 DAVVTS---EELLKVSRLWALDIAA---RRKPWIRSLHRTDKLGSLS-EAREVLKLARLQ 230
D +V + E LL+ + AL++A+ + P + L RTDKLG+ E L R
Sbjct: 179 DRLVPASRRETLLREACAVALEVASDPQKMPPPL--LTRTDKLGNADVEKIRSKYLPRAV 236
Query: 231 AKKTAPNMPQHQACLDVIEEGIVHGG-YSGVLKEAKVFKELVMLDTSRGLVHVFFAQRAT 289
+ Q ++C+ + EGI GG +G EA++F++ + SR L+HVF A R T
Sbjct: 237 EMRQKTGQIQFESCVRAVLEGIERGGGDAGWALEAELFRQCAASEASRALIHVFLASRRT 296
Query: 290 SKVPNVTDIGLKPR--GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKT 347
VT+ +P R VAVIGGGLMGSGIA + N VVLKEVN L I+
Sbjct: 297 -----VTNFKAEPHLHEPRTVAVIGGGLMGSGIAACILQNGGRVVLKEVNENALAAAIQR 351
Query: 348 IEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE--FKDVDMVIEAVIESVPLKQKIFSE 405
IEA +++R K+ D A+ A + L+G +++ + F DVD+V+EA +E+V KQ IF
Sbjct: 352 IEA----ILSRAKV--DTAD-ARRRLQGTIEFDKKLFSDVDLVVEAAVENVQAKQGIFRS 404
Query: 406 LEKACPPHCILATNTSTIDLNIVGE---KTSSQDRIIGAHFFSPAHVMPLLEIVRTERTS 462
L + PHCILATNTSTI+L+++GE + + R+IGAHFFSPAHVMPLLEIVR RT
Sbjct: 405 LAECTGPHCILATNTSTINLDLIGEAIPQVHKEGRLIGAHFFSPAHVMPLLEIVRANRTR 464
Query: 463 AQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVS-LGVDVFRIDSAIRS 521
+ + ++ K ++K P++VGNC GFAVNR +FP +Q A L LG+ + ID A +
Sbjct: 465 NRAVQMVLAFAKHLRKTPIIVGNCAGFAVNRMYFPQTQMAFFLTEYLGIHPYDIDRACQE 524
Query: 522 -FGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYT 580
GLP+GPF L DL G + + ++ F ++P+R + L++ GR G+ +G G Y
Sbjct: 525 VLGLPMGPFGLADLVGLDICDSVNQVFSMSYPERVCSLSIAGKLIEMGRKGQKSGAGFYR 584
Query: 581 Y-EKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEG 639
Y KP D +L + L+++ P +T +IV+MI FPVVNE+ RVLEE
Sbjct: 585 YGADHRKPIEDREMLDPL-----LASMTPPPLREPLTPLDIVQMIFFPVVNEAMRVLEER 639
Query: 640 IVVRASDLDDASVLGMSFPSYRGGIVFWADAV--GANYVYTSLKKWSQLYGN---FFKPS 694
I +A+DLD ASVLG FP+YRGG+++WA + G + L++W +G F PS
Sbjct: 640 IADKAADLDVASVLGYGFPAYRGGLLYWAQHLPGGPRLILERLREWDTRFGTQCPLFAPS 699
Query: 695 RFLE 698
LE
Sbjct: 700 FALE 703
>gi|308802091|ref|XP_003078359.1| putative tetrafunct (ISS) [Ostreococcus tauri]
gi|116056811|emb|CAL53100.1| putative tetrafunct (ISS) [Ostreococcus tauri]
Length = 1573
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 238/474 (50%), Positives = 319/474 (67%), Gaps = 4/474 (0%)
Query: 249 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 308
EE + G +G+ +E FK+ V ++GLVH FFAQRAT+ VP VTD GLKPR ++ V
Sbjct: 1099 EEALKLGPEAGLQREPVNFKKAVSSPAAKGLVHFFFAQRATNIVPGVTDGGLKPRVMKSV 1158
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
V+GGGLMGSGIATA +L I VVLKE+ E+L G+ I++N+ +V +G++T+DKA
Sbjct: 1159 GVVGGGLMGSGIATACLLAGIGVVLKEIKQEFLDAGVGRIQSNLASMVRKGRMTEDKARK 1218
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
+ ++K L +F+ DMVIEAVIE++ LKQKIF LEK C P CIL+TNTSTID+ +
Sbjct: 1219 LMSLVKPTLSDDDFRQCDMVIEAVIENLDLKQKIFCNLEKICRPDCILSTNTSTIDITKI 1278
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
K + +RI+GAHFFSPAHVM L EI+RT+ T +Q+++D + + K I+K PVVVGNCTG
Sbjct: 1279 ATKMKNPERIVGAHFFSPAHVMQLFEIIRTKDTPSQILVDTLGLSKQIRKTPVVVGNCTG 1338
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
FAVNR FFPY+ SA LV +G D + ID AI FG+P+GPF+L DL G+ V K F
Sbjct: 1339 FAVNRVFFPYTMSATALVDIGCDPYAIDRAIMMFGMPMGPFRLGDLVGHDVGVHVGKNFI 1398
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMP 608
FPDR +QSPL+ LL S R G+ +G G Y Y+ + PDP + + R +P
Sbjct: 1399 DDFPDRVYQSPLIPSLLASKRLGEKSGAGFYKYDNKRRATPDPEGVEGLIAASRAQTRLP 1458
Query: 609 ---GGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIV 665
P +T +EI EMI FPVVNE+CRVL+EGIVV+A D+D AS+LGM FP++RGGIV
Sbjct: 1459 LDGSSIPNGLTPQEIAEMIFFPVVNEACRVLDEGIVVKAGDIDTASILGMGFPAFRGGIV 1518
Query: 666 FWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLS-APVSSSSTSR 718
W D+VGA + T L+ W+ YG ++P +LE A +G L+ P+ + SR
Sbjct: 1519 HWGDSVGAAVIATKLRTWATRYGGLYQPCPYLENCAIQGRTLAQGPLDTKLKSR 1572
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 98/175 (56%), Positives = 119/175 (68%), Gaps = 5/175 (2%)
Query: 4 PRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSG 63
P VT V DGV +I + NPPVNALA+P++ GL+ +EA VKAIV+ G GG+FSG
Sbjct: 933 PGVTSSV-RDGVCVIEMSNPPVNALALPVLEGLEKALKEAQGDGRVKAIVIKGAGGKFSG 991
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
GFDI +K S + + + ++ L E KP VAA+E LALGGGLE+AM C AR
Sbjct: 992 GFDIGHLRKSTQGAPASDVGEFNA-ILCTLAEGGAKPCVAAIENLALGGGLEVAMSCAAR 1050
Query: 124 IAAPKTQLGLPELTLGVIP---GTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLG 175
+A P QLGLPEL LGVIP GTQRLPRLVGL K++EMML SKSI +EE KLG
Sbjct: 1051 VATPGAQLGLPELQLGVIPGFGGTQRLPRLVGLEKSLEMMLKSKSIKAEEALKLG 1105
>gi|355388877|gb|AER62381.1| hypothetical protein [Pseudoroegneria spicata]
Length = 339
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 218/338 (64%), Positives = 271/338 (80%)
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
+R WALDI RKPWI+SL++TDKL L EARE+LK AR QA+K A N+ C+DVIE
Sbjct: 2 ARRWALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPIICIDVIE 61
Query: 250 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 309
EGIV G +G+ KEA F+ L+ DT + L+HVFF+QRATSKVP TD+GL PR +RKVA
Sbjct: 62 EGIVSGPRAGLWKEANAFQGLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKIRKVA 121
Query: 310 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 369
++GGGLMGSGIATA IL+N V+LKEVN ++L GI I+AN++ V +GK+T+++ A
Sbjct: 122 ILGGGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEKA 181
Query: 370 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 429
L +L G L Y +FK+VD+VIEAVIE+V LKQ+IF++LEK CP HCILATNTSTIDLN++G
Sbjct: 182 LSLLTGTLGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIG 241
Query: 430 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 489
EKT SQDRI+GAHFFSPAHVMPLLEIVRT+ TSAQV++DL+ VGK IKK P+VVGNCTGF
Sbjct: 242 EKTKSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGF 301
Query: 490 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIG 527
AVNR FFPY+QSA L V G+DV++ID A FG+P+G
Sbjct: 302 AVNRMFFPYTQSALLFVDYGMDVYKIDRACTKFGMPMG 339
>gi|355388899|gb|AER62392.1| hypothetical protein [Henrardia persica]
gi|355388901|gb|AER62393.1| hypothetical protein [Henrardia persica]
Length = 339
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 218/338 (64%), Positives = 270/338 (79%)
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
+R WALDI RKPWI+SL++TDKL L EARE+LK AR QA+K A N+ C+DVIE
Sbjct: 2 ARRWALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLVCIDVIE 61
Query: 250 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 309
EGIV G +G+ KEA F+ L+ DT + L+HVFF+QRATSKVP TD+GL PR + KVA
Sbjct: 62 EGIVSGPRAGLWKEANAFQGLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKITKVA 121
Query: 310 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 369
++GGGLMGSGIATA IL+N V+LKEVN ++L GI I+AN++ V +GK+T+++ A
Sbjct: 122 ILGGGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEKA 181
Query: 370 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 429
L +L G L Y +FK+VD+VIEAVIE+V LKQ+IF++LEK CP HCILATNTSTIDLN++G
Sbjct: 182 LSLLSGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIG 241
Query: 430 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 489
EKT SQDRIIGAHFFSPAHVMPLLEIVRT+ TSAQV++DL+ VGK IKK P+VVGNCTGF
Sbjct: 242 EKTKSQDRIIGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGF 301
Query: 490 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIG 527
AVNR FFPY+QSA L V G+DV++ID A FG+P+G
Sbjct: 302 AVNRMFFPYTQSALLFVDYGMDVYKIDRACTKFGMPMG 339
>gi|355388873|gb|AER62379.1| hypothetical protein [Psathyrostachys juncea]
Length = 339
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 217/339 (64%), Positives = 270/339 (79%)
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 248
++R WALDI RKPWI+SL++TDKL L EARE+LK AR QA+K A N+ C+DVI
Sbjct: 1 IARRWALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLVCIDVI 60
Query: 249 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 308
EEGIV G +G+ KEA F+ L+ DT + L+HVFF+QRATSKVP TD+GL PR + KV
Sbjct: 61 EEGIVSGPRAGLWKEANAFQGLLFSDTCKNLLHVFFSQRATSKVPGATDLGLMPRKITKV 120
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
A++GGGLMGSGIATA IL+N V+LKEVN ++L GI I+AN++ V +GK+T+++
Sbjct: 121 AILGGGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEK 180
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
AL +L G L Y +FK+VD+VIEAVIE V LKQ+IF++LEK CP HCILATNTSTIDLN++
Sbjct: 181 ALSLLSGALGYEKFKEVDLVIEAVIEDVKLKQQIFADLEKYCPSHCILATNTSTIDLNLI 240
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
GEKT SQDRI+GAHFFSPAHVMPLLEIVRT+ TSAQV++DL+ VGK IKK P+VVGNCTG
Sbjct: 241 GEKTKSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTG 300
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIG 527
FAVNR FFPY+QSA L V G+DV++ID A FG+P+G
Sbjct: 301 FAVNRMFFPYTQSALLFVDYGMDVYKIDRACTKFGMPMG 339
>gi|339492228|ref|YP_004712521.1| enoyl-CoA hydratase [Pseudomonas stutzeri ATCC 17588 = LMG 11199]
gi|338799600|gb|AEJ03432.1| enoyl-CoA hydratase [Pseudomonas stutzeri ATCC 17588 = LMG 11199]
Length = 701
Score = 444 bits (1141), Expect = e-121, Method: Compositional matrix adjust.
Identities = 259/696 (37%), Positives = 394/696 (56%), Gaps = 23/696 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A+I + NPPVNAL + GL D F+EA +V A+VL G F G DI F K
Sbjct: 13 IALILVNNPPVNALGHAVRKGLLDAFQEADEAPEVSAVVLVCEGPTFMAGADIKEFGKPP 72
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
A S+ V+ +IE C+KP VA + G ALGGGLE+A+GCH RIA ++GLP
Sbjct: 73 QA--------PSLPEVIEVIEGCRKPSVAVIHGTALGGGLEVALGCHYRIARSDAKVGLP 124
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 191
E+ LG++PG TQRLPRL G+ KA+EM++ + I + E + ++D + + L++
Sbjct: 125 EVKLGLLPGAGGTQRLPRLAGVEKALEMIVSGQPIGAAEALEHHIVDELFEGD-LIEAGL 183
Query: 192 LWALDIAARRKPWIRSLHRTDKL-GSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 250
+A + + RS +T L G +EA +++ + K P + C+ +E
Sbjct: 184 TYARRLVEEGRGPRRSGEQTRGLEGVDNEA--LIRAKHAEVAKRMPGLFSPLRCIAAVEA 241
Query: 251 GIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKVA 309
G+ +E ++F E + L+H FFA+R K+ ++ +D+ KPR +R A
Sbjct: 242 ATRLPLAEGLKRERELFTECLNSPQRGALIHSFFAERQAGKIDDLPSDV--KPRPIRTAA 299
Query: 310 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 369
VIGGG MG GIA + + V L E+N + L +G++ V RG LT+D
Sbjct: 300 VIGGGTMGVGIALSFANAGVPVKLLEINDDALQRGLQRARETYAASVKRGSLTEDAMEQR 359
Query: 370 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 429
L ++ GV DY D D+V+EAV E + +KQ++F +L+ C P ILA+NTS++DLN +
Sbjct: 360 LALITGVTDYGALADADVVVEAVFEEMGVKQQVFEQLDAVCKPGAILASNTSSLDLNAIA 419
Query: 430 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 489
T + ++G HFFSPA+VM LLE+VR ERTS +V+ M +GK +KKV VVVG C GF
Sbjct: 420 AFTRRPEDVVGLHFFSPANVMRLLEVVRGERTSDEVLATAMAIGKQLKKVSVVVGVCDGF 479
Query: 490 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDK 549
NR F Y + A L+ G ++D+A+R+FG+ +GPF + DL+G + A K
Sbjct: 480 VGNRMVFQYGREAEFLLEEGATPQQVDAALRNFGMAMGPFAMRDLSGLDIGQAIRKRQRA 539
Query: 550 AFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIMP 608
P + D L +G G+ G G Y YE G++ P+ +P + P++E R I
Sbjct: 540 TLPAHLDFPTVSDKLCAAGMLGQKTGAGYYRYEPGNRTPQENPDLAPMLEAASREKGI-- 597
Query: 609 GGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWA 668
+ ++ E+ IVE +F VNE ++LEEGI R+SD+D + G FP++RGG +++A
Sbjct: 598 --ERKALDEQYIVERCIFAQVNEGAKILEEGIAQRSSDIDVIYLNGYGFPAFRGGPMYYA 655
Query: 669 DAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
D+VG + V +K+ G+++KP+ LE+ A +G
Sbjct: 656 DSVGLDKVLARVKELHARCGDWWKPAPLLEKLAAEG 691
>gi|167586951|ref|ZP_02379339.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein [Burkholderia
ubonensis Bu]
Length = 694
Score = 444 bits (1141), Expect = e-121, Method: Compositional matrix adjust.
Identities = 264/664 (39%), Positives = 374/664 (56%), Gaps = 20/664 (3%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVN L + G+ + + A V AIVLTG G FSGG DI F
Sbjct: 9 DGVAVITLNNPPVNGLGLSTRLGIMEGLDRAAQDPAVAAIVLTGAGRAFSGGADITEFNT 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + ++ V+ +E KP+V A+ +A+GGGLELA+G H RIAAP Q+
Sbjct: 69 PKA------LQEPTLHTVIRTVEASAKPVVVAIHSVAMGGGLELALGAHYRIAAPGAQIA 122
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 189
LPE+ LG++PG TQRLPR VGL A+ M++ + SE+ K GL DA+ + LL
Sbjct: 123 LPEVKLGLLPGAGGTQRLPRAVGLETALNMIVSGAPVPSEQLAKSGLFDAMAEGD-LLDA 181
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
+ +A + A+ P R D+ A ++ AR AK APN P C+D IE
Sbjct: 182 AVAFARKVGAQAGPHPRV---RDRKIVHENAAGFIQFARNSAKAAAPNFPAPHKCIDAIE 238
Query: 250 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKV 308
G++HG GV+ E F L+M SR L H FF +RA SK+P+V D + R VR+V
Sbjct: 239 AGVLHGFDHGVIAERDGFVALMMTPESRALRHAFFGERAASKIPDVPADTPV--REVRQV 296
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
AVIG G MG GIA + + V L E + L +G+ TI N V +GKLTQ+K +
Sbjct: 297 AVIGAGTMGGGIAMNFVNAGLPVTLLETKQDALERGLATIRKNYDAQVKKGKLTQEKLDA 356
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
+ ++ L Y++ KD D++IEAV E + +K+++F +L++A P ILA+NTST+D+N +
Sbjct: 357 RMALITPTLSYADLKDADLIIEAVFEELGVKEQVFRQLDEAAKPGAILASNTSTLDVNRI 416
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
T ++G HFFSPA+VM LLE+VR E T+ V+ +M V K I+K VV G C G
Sbjct: 417 AAFTKRPQDVVGMHFFSPANVMKLLEVVRGEATAKDVLATVMAVAKKIRKTAVVSGVCDG 476
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR Y + A ++ G ++D AI FG +GPF++ DLAG + A K
Sbjct: 477 FIGNRMIEQYIRQALFMLEEGALPAQVDRAIEKFGFAMGPFRMSDLAGNDIGWAIRKRRY 536
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMP 608
PD + + D L + GR G+ G G Y Y G + K PS L ++E +
Sbjct: 537 VEKPDLHYPK-IADRLCEQGRFGQKTGAGWYDYAPGER-KAKPSAL--VDEMIVAYSQER 592
Query: 609 GGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWA 668
G + + + EIVE ++F +VNE ++LEE I +ASD+D + G FP +RGG + +A
Sbjct: 593 GVERRKMGDDEIVERLVFALVNEGAKILEEKIASKASDIDMVYLTGYGFPLWRGGPMLYA 652
Query: 669 DAVG 672
D VG
Sbjct: 653 DTVG 656
>gi|355388897|gb|AER62391.1| hypothetical protein [Eremopyrum triticeum]
Length = 339
Score = 444 bits (1141), Expect = e-121, Method: Compositional matrix adjust.
Identities = 217/338 (64%), Positives = 270/338 (79%)
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
+R WALDI RKPWI+SL++TDKL L EARE+LK AR QA+K A N+ C+DVIE
Sbjct: 2 ARRWALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLICIDVIE 61
Query: 250 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 309
EGIV G +G+ KEA F+ L+ DT + L+HVFF+QRATSKVP TD+GL PR + KVA
Sbjct: 62 EGIVSGPQAGLWKEANAFQGLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKITKVA 121
Query: 310 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 369
++GGGLMGSGIATA IL+N V+LKEVN ++L GI I+AN++ V +GK+T+++ A
Sbjct: 122 ILGGGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEKA 181
Query: 370 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 429
L +L G L Y +FK+VD+VIEAVIE+V LKQ+IF++LEK CP HCILATNTSTIDLN++G
Sbjct: 182 LSLLSGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIG 241
Query: 430 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 489
EKT SQDRI+GAHFFSPAHVMPLLEIVRT+ TSAQV++DL+ VGK IKK P+VVGNCTGF
Sbjct: 242 EKTKSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGF 301
Query: 490 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIG 527
AVNR FFPY+QSA L V G+DV++ID A FG+P+G
Sbjct: 302 AVNRMFFPYTQSALLFVDYGMDVYKIDRACTKFGMPMG 339
>gi|254252171|ref|ZP_04945489.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia dolosa AUO158]
gi|124894780|gb|EAY68660.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia dolosa AUO158]
Length = 694
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 258/676 (38%), Positives = 377/676 (55%), Gaps = 20/676 (2%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVN L + G+ D + A + AIVLTG G FSGG DI F
Sbjct: 9 DGVAVITLDNPPVNGLGLSTRLGIMDALDRAAQDPSIAAIVLTGAGRAFSGGADITEFNT 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + ++ V+ +E KP+VAA+ G+ +GGGLELA+G H RIAAP+ Q+
Sbjct: 69 PKA------LQEPTLHTVIRAVEASAKPVVAALHGVVMGGGLELALGAHYRIAAPRAQIA 122
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 189
LPE+ LG++PG TQRLPR VGL A+ M++ + SE+ GL D + + LL
Sbjct: 123 LPEVKLGLLPGAGGTQRLPRAVGLETALNMIVSGTPVPSEQLADSGLFDDIAGGD-LLDA 181
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
+ +A + AR P R D+ A ++ AR K APN P C+D IE
Sbjct: 182 ALAFARKVGARPGPHPRV---RDRKIVHDNAAGFIQFARNSVKAAAPNFPAPHRCIDAIE 238
Query: 250 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKV 308
G++HG G E + F L+M SR + H FFA+RA SK+P+V D + R +R+V
Sbjct: 239 AGVLHGFDKGSAAEREGFVALMMTPESRAMRHAFFAERAASKIPDVPADTPV--REIRRV 296
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
VIG G MG GIA + + V L E E L +G+ TI N V +GKLT D+ +
Sbjct: 297 GVIGAGTMGGGIAMNFVNAGLPVTLLETTQEALERGLATIRKNYDAQVAKGKLTHDQRDA 356
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
+ ++ L Y + KD D+++EAV E + +K+++F L++ P ILA+NTST+D+N +
Sbjct: 357 RIALIAPTLSYDDLKDADLIVEAVFEELDVKERVFRRLDEVAKPGAILASNTSTLDVNRI 416
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
T ++G HFFSPA+VM LLE+VR +T+ + +M V K I+K VV G C G
Sbjct: 417 ASFTKRPHDVVGMHFFSPANVMKLLEVVRGAQTAKDALATVMAVAKKIRKTAVVSGVCDG 476
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR Y + A ++ G +ID AI +FG +GPF++ DLAG + A K
Sbjct: 477 FIGNRMIEQYIRQALFMLEEGALPAQIDRAIEAFGFAMGPFRMSDLAGNDIGWAIRKRRY 536
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMP 608
PD + S + D L + GR G+ G G Y Y G + + PS L ++E R +
Sbjct: 537 VEKPDLHY-SKIADRLCEQGRFGQKTGAGWYDYAPGER-RARPSAL--VDEMVRAYSNER 592
Query: 609 GGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWA 668
G ++ + EIVE +++ +VNE ++LEE I +ASD+D + G FP +RGG + +A
Sbjct: 593 GIARRTIGDDEIVERLVYALVNEGAKILEERIASKASDIDMVYLTGYGFPIWRGGPMLYA 652
Query: 669 DAVGANYVYTSLKKWS 684
D VG V ++++++
Sbjct: 653 DMVGLYNVERAIRRYA 668
>gi|163792916|ref|ZP_02186892.1| PROBABLE TRIFUNCTONAL: ENOYL-COA HYDRATASE AND
DELTA3-CIS-DELTA2-TRANS-ENOYL-COA ISOMERASE AND [alpha
proteobacterium BAL199]
gi|159181562|gb|EDP66074.1| PROBABLE TRIFUNCTONAL: ENOYL-COA HYDRATASE AND
DELTA3-CIS-DELTA2-TRANS-ENOYL-COA ISOMERASE AND [alpha
proteobacterium BAL199]
Length = 699
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 257/695 (36%), Positives = 385/695 (55%), Gaps = 18/695 (2%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A++ L NPPVN L + AGL+ F + + DV AIV+ G G FS G DI F K
Sbjct: 12 IAVVRLDNPPVNGLGAAVRAGLEAAFNDLLADSDVSAIVIAGAGRMFSAGADIKEFGKTP 71
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
+V +P++ ++ +E KP+VAA+ G+A GGGLELA+GCH RIAAPKT++GLP
Sbjct: 72 PT-NVPNLPEL-----IDWLEASIKPVVAAIHGVAAGGGLELALGCHYRIAAPKTRVGLP 125
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 191
E+TLG++PG TQRLPR+ G+ A+++++ + ++ E KLG+IDA+ + L+ +
Sbjct: 126 EVTLGILPGAGGTQRLPRVAGVEAALDLIVSGRLVSEREALKLGMIDAIADGD-LIDAAV 184
Query: 192 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 251
A+++A + RS +D L + R +K A M AC+ IE
Sbjct: 185 AKAIELADVGENPRRSSTLSDGLTEAQANPGLFDAFRKSMEKRARGMNAPYACVRCIEAA 244
Query: 252 IVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVI 311
G E + FK LV +R + H FFA+R SK+P+V D + + VI
Sbjct: 245 TRLPFAEGRRFEHEEFKALVTAVEARAMRHAFFAEREVSKIPDVPD-STPTQPIESAGVI 303
Query: 312 GGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALK 371
G G MG GIA I V + E + L G+ I AN + V +G+++Q + +
Sbjct: 304 GCGTMGGGIAMVFANAGIPVTIVESDEGALDNGLTKIRANYQATVDKGRMSQQAMDERMA 363
Query: 372 MLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEK 431
+ G D++ D D+V+EAV E + +KQ++F L+ C P +LATNTST+D++ +
Sbjct: 364 SITGATDFAAIADADIVVEAVFEEMAVKQQVFRSLDGICQPDVVLATNTSTLDVDTIAAA 423
Query: 432 TSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAV 491
T + +IG HFFSPA+VM LLE+VR ++S Q I M + K + KV V+VG C GF
Sbjct: 424 TGRPESVIGTHFFSPANVMRLLEVVRGAKSSPQTIATAMGLSKTLGKVGVLVGVCDGFVG 483
Query: 492 NRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAF 551
NR Y + A LV G +D I FG P+GPF + DLAG V K
Sbjct: 484 NRMLHQYLREAAFLVEEGALPQDVDRVIFEFGFPMGPFAMSDLAGNDVGWRIRKAQAAER 543
Query: 552 P-DRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGG 610
P ++ + L D + + GR G+ G G Y Y+ G P PDP + +I L+ G
Sbjct: 544 PSNQRYSGTLADRICERGRFGQKTGAGWYRYKDGRTPLPDPDIEALI-----LATSQELG 598
Query: 611 KPISV-TEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWAD 669
V +++EI+E L+P+VNE ++L+EGI +RASD+D + G FP YRGG +FWAD
Sbjct: 599 MSRRVISDQEILERCLYPLVNEGAKILDEGIALRASDVDVVWMQGYGFPRYRGGPMFWAD 658
Query: 670 AVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
VG + + +++++ +G++ P+ LE A +G
Sbjct: 659 TVGLDVIAAAMRRFQAEHGDWMAPAPLLERLADEG 693
>gi|386018756|ref|YP_005936780.1| enoyl-CoA hydratase [Pseudomonas stutzeri DSM 4166]
gi|327478728|gb|AEA82038.1| enoyl-CoA hydratase [Pseudomonas stutzeri DSM 4166]
Length = 701
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 259/696 (37%), Positives = 394/696 (56%), Gaps = 23/696 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A+I + NPPVNAL + GL D F+EA +V A+VL G F G DI F K
Sbjct: 13 IALILVNNPPVNALGHAVRKGLLDAFQEADEAPEVTAVVLVCEGPTFMAGADIKEFGKPP 72
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
A S+ V+ +IE C+KP VA + G ALGGGLE+A+GCH RIA ++GLP
Sbjct: 73 QA--------PSLPEVIEVIEGCRKPSVAVIHGTALGGGLEVALGCHYRIARSDAKVGLP 124
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 191
E+ LG++PG TQRLPRL G+ KA+EM++ + I + E + ++D + + L++
Sbjct: 125 EVKLGLLPGAGGTQRLPRLAGVEKALEMIVSGQPIGAAEALEHYIVDELFEGD-LIEAGL 183
Query: 192 LWALDIAARRKPWIRSLHRTDKL-GSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 250
+A + + RS +T L G +EA +++ + K P + C+ +E
Sbjct: 184 TYARRLVEEGRGPRRSGEQTRGLEGVDNEA--LIRAKHAEVAKRMPGLFSPLRCIAAVEA 241
Query: 251 GIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKVA 309
G+ +E ++F E + L+H FFA+R K+ ++ +D+ PR +R A
Sbjct: 242 ATRLPLAEGLKRERELFTECLNSPQRGALIHSFFAERQAGKIDDLPSDV--TPRPIRTAA 299
Query: 310 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 369
VIGGG MG GIA + + V L E+N E L +G++ V RG LT+D
Sbjct: 300 VIGGGTMGVGIALSFANAGVPVKLLEINDEALQRGLQRARETYAASVKRGSLTEDAMEQR 359
Query: 370 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 429
L ++ GV DY D D+V+EAV E + +KQ++F +L+ C P ILA+NTS++DLN +
Sbjct: 360 LALIAGVTDYGALADADVVVEAVFEEMGVKQQVFEQLDAVCKPGAILASNTSSLDLNAIA 419
Query: 430 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 489
T + ++G HFFSPA+VM LLE+VR ERTS +V+ M +GK +KKV VVVG C GF
Sbjct: 420 GFTRRPEDVVGMHFFSPANVMRLLEVVRGERTSDEVLAAAMAIGKQLKKVSVVVGVCDGF 479
Query: 490 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDK 549
NR F Y + A L+ G ++D+A+R+FG+ +GPF + DL+G + A K
Sbjct: 480 VGNRMVFQYGREAEFLLEEGATPQQVDAALRNFGMAMGPFAMRDLSGLDIGQAIRKRQRA 539
Query: 550 AFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIMP 608
P + D L +G G+ G G Y YE G++ P+ +P + P++E R I
Sbjct: 540 TLPAHLDFPTVSDKLCAAGMLGQKTGAGYYRYEPGNRTPQENPDLAPMLEAASREKGI-- 597
Query: 609 GGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWA 668
+ ++ E+ IVE +F +VNE ++LEEGI R+SD+D + G FP++RGG +++A
Sbjct: 598 --ERQALDEQYIVERCIFALVNEGAKILEEGIAQRSSDIDVIYLNGYGFPAFRGGPMYYA 655
Query: 669 DAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
D+VG + V +K+ G+++KP+ LE+ A +G
Sbjct: 656 DSVGLDKVLARVKELHARCGDWWKPAPLLEKLAAEG 691
>gi|355388881|gb|AER62383.1| hypothetical protein [Taeniatherum caput-medusae]
gi|355388903|gb|AER62394.1| hypothetical protein [Triticum monococcum subsp. aegilopoides]
Length = 339
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 217/338 (64%), Positives = 270/338 (79%)
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
+R WALDI RKPWI+SL++TDKL L EARE+LK AR QA+K A N+ C+DVIE
Sbjct: 2 ARRWALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLICIDVIE 61
Query: 250 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 309
EGIV G +G+ KEA F+ L+ DT + L+HVFF+QRATSKVP TD+GL PR + KVA
Sbjct: 62 EGIVSGPRAGLWKEANAFQGLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKITKVA 121
Query: 310 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 369
++GGGLMGSGIATA IL+N V+LKEVN ++L GI I+AN++ V +GK+T+++ A
Sbjct: 122 ILGGGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEKA 181
Query: 370 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 429
L +L G L Y +FK+VD+VIEAVIE+V LKQ+IF++LEK CP HCILATNTSTIDLN++G
Sbjct: 182 LSLLSGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIG 241
Query: 430 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 489
EKT SQDRI+GAHFFSPAHVMPLLEIVRT+ TSAQV++DL+ VGK IKK P+VVGNCTGF
Sbjct: 242 EKTKSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGF 301
Query: 490 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIG 527
AVNR FFPY+QSA L V G+DV++ID A FG+P+G
Sbjct: 302 AVNRMFFPYTQSALLFVDYGMDVYKIDRACTKFGMPMG 339
>gi|121604744|ref|YP_982073.1| 3-hydroxyacyl-CoA dehydrogenase [Polaromonas naphthalenivorans CJ2]
gi|120593713|gb|ABM37152.1| 3-hydroxyacyl-CoA dehydrogenase [Polaromonas naphthalenivorans CJ2]
Length = 699
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 272/704 (38%), Positives = 386/704 (54%), Gaps = 33/704 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA+ITL NPPVN L L D ++A D VK+IV+TG G FSGG DIN F
Sbjct: 11 VALITLSNPPVNGLGYATRVSLTDNLQKANDDDAVKSIVITGAGKAFSGGADINEFGSPK 70
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
+ +L+ V+ IE+ KP+VAA+ + +GGGLELA+GCH RIAAP + LP
Sbjct: 71 AVQEPNLLS------VILAIENSSKPVVAAIHSVCMGGGLELALGCHYRIAAPGCSIALP 124
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSE-----EGWKLGLIDAVVTS-EE 185
E+ LG++PG TQRLPR +G+ A+ M++ +S+ S+ G KL D + +S E
Sbjct: 125 EVKLGLLPGAGGTQRLPRALGVEPALNMIVSGESVKSDMLAQIPGQKL--FDRMASSVET 182
Query: 186 LLKVSRLWALDIAARRK-PWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 244
L + +A IA R P +RSL + G + AR K A N P C
Sbjct: 183 LADEAFAFAQAIADTRPLPLVRSLPCKHRNGD-----AYFQFARNMVKGMAKNFPAPLKC 237
Query: 245 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRG 304
+D +E G+ E + F L+ SR L H+F A+RA SK+P++ K R
Sbjct: 238 VDAVEAATKQKFDEGMRLEREFFTNLMFTPESRALRHIFMAERAASKIPDLPADTPK-RE 296
Query: 305 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 364
+ VAVIG G MG GIA + I V + E+ E L +GI TI N V +GKL QD
Sbjct: 297 INSVAVIGAGTMGGGIAMNFLNAGIPVKMLEMKPEALERGIATIRKNYESQVKKGKLKQD 356
Query: 365 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 424
K + +L L Y + KD D+VIEAV E + +KQ +F EL++ P ILA+NTST+D
Sbjct: 357 KYEQRMGLLSTTLSYGDLKDADLVIEAVFEDMGVKQAVFRELDRVMKPGAILASNTSTLD 416
Query: 425 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 484
LN + T + ++G HFFSPA++M LLE+VR E+T V+ +M + K I+K VV G
Sbjct: 417 LNQIASFTQRPEDVVGLHFFSPANIMKLLEVVRGEKTGKDVLATVMAIAKKIRKTAVVSG 476
Query: 485 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATS 544
C GF NR Y + L+ G ++D AI FG +GPF++ DLAG + A
Sbjct: 477 VCDGFIGNRMIEQYGRQGGFLLDEGCTPEQVDKAIEKFGFAMGPFRMGDLAGNDIGWAIR 536
Query: 545 KEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVLPIIEECRRL 603
K + PD + S DLL + GR G+ G G Y Y G + P+ V+ +IEE R
Sbjct: 537 KRRYQEKPDMKY-SKTADLLCEKGRFGQKTGAGWYDYVAGKRDAIPNQEVVKMIEEHRAS 595
Query: 604 SNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGG 663
I P ++++EIV+ +++ +VNE +LEEGI +ASD+D ++G FP YRGG
Sbjct: 596 LGITPR----KISDEEIVQRLVYSLVNEGAHILEEGIASKASDIDMVYLMGYGFPIYRGG 651
Query: 664 IVFWADAVGANYVYTSLKKWSQL---YGNFFKPSRFLEERATKG 704
+ +AD VG V ++K++++ F+KP+ L A +G
Sbjct: 652 PMLYADQVGLFNVVQAMKRFAKNPLDDAGFWKPAPLLARLAAEG 695
>gi|449472180|ref|XP_004153517.1| PREDICTED: LOW QUALITY PROTEIN: glyoxysomal fatty acid
beta-oxidation multifunctional protein MFP-a-like,
partial [Cucumis sativus]
Length = 350
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 210/345 (60%), Positives = 270/345 (78%)
Query: 262 KEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIA 321
+E + F+ L+ DTS+ L+HVFFAQR T+KVP V+D+GL PR + KVAVIGGGLMGSGIA
Sbjct: 1 QEIEDFQVLLHADTSKSLIHVFFAQRGTTKVPGVSDLGLTPRRINKVAVIGGGLMGSGIA 60
Query: 322 TAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE 381
TA IL+N +V+LKEVN ++L G+ ++AN++ V +G +T +K + +LKGVLDY
Sbjct: 61 TALILSNYHVILKEVNEKFLEAGLGRVKANLQSRVRKGTMTPEKFERTISLLKGVLDYES 120
Query: 382 FKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGA 441
FKDVDMVIEAVIE++ LKQ+I +LEK CPPHCILATNTSTIDL+++GEKT+S DRI+GA
Sbjct: 121 FKDVDMVIEAVIENISLKQQIIVDLEKYCPPHCILATNTSTIDLDLIGEKTNSHDRIVGA 180
Query: 442 HFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQS 501
HFFSPAHVMPLLE+VRT RT+ QVI+DL+ VGK IKK PVVVGNCTGFAVNR FFPY+Q+
Sbjct: 181 HFFSPAHVMPLLEVVRTNRTAPQVIVDLVDVGKRIKKTPVVVGNCTGFAVNRIFFPYTQA 240
Query: 502 ARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLV 561
A LLV GVD ++ID AI FG+P+GPF+L+DL G+GVA AT +F + FPDR+F+S ++
Sbjct: 241 ALLLVEHGVDPYQIDRAIYKFGMPMGPFRLIDLVGFGVAIATGGQFVQNFPDRTFKSMII 300
Query: 562 DLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNI 606
L+ + R G+ KG Y Y+K K KPDP + IE+ R +S I
Sbjct: 301 PLMQEDKRAGETTQKGFYLYDKNRKSKPDPELKKYIEKARSMSGI 345
>gi|355388891|gb|AER62388.1| hypothetical protein [Australopyrum retrofractum]
Length = 339
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 216/338 (63%), Positives = 270/338 (79%)
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
+R WALDI RKPWI+SL++TDKL L EARE+LK AR QA+K A N+ C+DVIE
Sbjct: 2 ARRWALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLVCIDVIE 61
Query: 250 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 309
EGIV G +G+ KEA F+ L+ DT + L+HVFF+QRATSKVP TD+GL PR + KVA
Sbjct: 62 EGIVSGPRAGLWKEANAFQSLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKITKVA 121
Query: 310 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 369
++GGGLMGSGIATA IL+N V+LKEVN ++L GI I+AN++ V +GK+T+++ A
Sbjct: 122 ILGGGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEKA 181
Query: 370 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 429
L ++ G L Y +FK+VD+VIEAVIE+V LKQ+IF++LEK CP HCILATNTSTIDLN++G
Sbjct: 182 LSLVTGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIG 241
Query: 430 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 489
EKT SQDRI+GAHFFSPAHVMPLLEIVRT+ TSAQV++DL+ VGK IKK P+VVGNCTGF
Sbjct: 242 EKTKSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGF 301
Query: 490 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIG 527
AVNR FFPY+QSA L V G+DV++ID A FG+P+G
Sbjct: 302 AVNRMFFPYTQSALLFVDYGMDVYKIDRACTKFGMPMG 339
>gi|355388889|gb|AER62387.1| hypothetical protein [Psathyrostachys juncea]
Length = 339
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 217/339 (64%), Positives = 270/339 (79%)
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 248
++R WALDI RKPWI+SL++TDKL L EARE+LK AR QA+K A N+ C+DVI
Sbjct: 1 IARRWALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLVCIDVI 60
Query: 249 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 308
EEGIV G +G+ KEA F+ L+ DT + L+HVFF+QRATSKVP TD+GL PR + KV
Sbjct: 61 EEGIVSGPRAGLWKEANAFQGLLFSDTCKNLLHVFFSQRATSKVPGATDLGLMPRKITKV 120
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
A++GGGLMGSGIATA IL+N V+LKEVN ++L GI I+AN++ V +GK+T+++
Sbjct: 121 AILGGGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEK 180
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
AL +L G L Y +FK+VD+VIEAVIE V LKQ+IF++LEK CP HCILATNTSTIDLN++
Sbjct: 181 ALSLLSGALGYEKFKEVDLVIEAVIEDVKLKQQIFADLEKYCPSHCILATNTSTIDLNLI 240
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
GEKT SQDRI+GAHFFSPAHVMPLLEIVRT+ TSAQV++DL+ VGK IKK P+VVGNCTG
Sbjct: 241 GEKTKSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTG 300
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIG 527
FAVNR FFPY+QSA L V G+DV++ID A FG+P+G
Sbjct: 301 FAVNRMFFPYTQSALLFVDHGMDVYKIDRACTKFGMPMG 339
>gi|389876490|ref|YP_006370055.1| peroxisomal bifunctional enzyme [Tistrella mobilis KA081020-065]
gi|388527274|gb|AFK52471.1| peroxisomal bifunctional enzyme [Tistrella mobilis KA081020-065]
Length = 710
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 257/695 (36%), Positives = 395/695 (56%), Gaps = 23/695 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
V +IT+ NPPVNAL+ + GL D E + D+ KA+VL G G F G DI F K
Sbjct: 24 VGVITVDNPPVNALSQHVRQGLLDCLAEGLADDEAKALVLVGAGRTFIAGADIREFGKPL 83
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
D++ V++ E+ KP+VAA+ G ALGGGLE+A+GCH R+A + ++GLP
Sbjct: 84 AEPDLNG--------VISTYENATKPVVAAIHGTALGGGLEVALGCHYRVAVAQGKVGLP 135
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 191
E+ LG++PG TQRLPR+ G+ AI+M+ K + + + +LG+IDAVV +EL+ +
Sbjct: 136 EVKLGILPGAGGTQRLPRVAGVEAAIDMITTGKFVPAGKALQLGIIDAVV--DELIPGAV 193
Query: 192 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 251
+A + P R +K+ + A+ L R Q K A C D +
Sbjct: 194 AFARKLVEDGAPLRRVRDMDEKVKAFDAAK--LPEIRKQVVKAARGQMSPVGCFDAVAGA 251
Query: 252 IVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT-DIGLKPRGVRKVAV 310
+ G+ E ++F L+ D S+ L H+FFA+R K+P+V D P +R+ A+
Sbjct: 252 VTLPFDEGLKNEREIFGGLMASDQSKALRHIFFAEREALKIPDVPGDTPTLP--IRQAAI 309
Query: 311 IGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNAL 370
IG G MG GIA I V + E++++ L +G+ I AN V++G+LTQD + +
Sbjct: 310 IGAGTMGGGIAMNFANAGIPVKVLEMSADALERGLGIIRANYAATVSKGRLTQDAMDKRM 369
Query: 371 KMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGE 430
+++GVLDY KD D++IEAV E + +K+K+FS L+ P +LA+NTST+D++ +
Sbjct: 370 GLIEGVLDYDALKDADIIIEAVFEEMDIKKKVFSTLDAVAKPGAVLASNTSTLDIDEIAA 429
Query: 431 KTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFA 490
TS + +IG HFFSPA+VMPLLE+VR +TS QVI M + K I KVPV+VGNC GF
Sbjct: 430 TTSRPEFVIGTHFFSPANVMPLLELVRGAKTSYQVISTSMKLAKTIGKVPVLVGNCDGFV 489
Query: 491 VNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKA 550
NR PY Q L++ G ++D ++ +GL +GPF + D+AG V+ K
Sbjct: 490 GNRMLEPYVQQGELMLVEGALPAQVDGVLQRWGLAMGPFTMGDMAGLDVSWRIRKRRAAT 549
Query: 551 FPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPG 609
+ F + D + + GR G+ G Y YE GS+ P DP + +I E + + +
Sbjct: 550 RRNDLFWPTVSDQICEMGRFGQKTKAGYYLYEGGSRTPVTDPKIEQLIVEASKAAGV--- 606
Query: 610 GKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWAD 669
+ ++E EI++ L+ ++NE + LEEG+ +RASD+D G FP++RGG +F AD
Sbjct: 607 -ERREISEDEILKRSLYALINEGAKCLEEGMAIRASDIDVIYCFGYGFPAWRGGPMFQAD 665
Query: 670 AVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+G + V +K++ + +KP++ +E +G
Sbjct: 666 LIGLDKVLADIKQFHADLDDRWKPAKLIETLVAEG 700
>gi|149378483|ref|ZP_01896167.1| fatty oxidation complex, alpha subunit [Marinobacter algicola
DG893]
gi|149357234|gb|EDM45772.1| fatty oxidation complex, alpha subunit [Marinobacter algicola
DG893]
Length = 697
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 263/699 (37%), Positives = 384/699 (54%), Gaps = 21/699 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+ +IT+ PPVNAL+ + +GL E+ D K ++L G F G DI F K
Sbjct: 13 IGVITVNYPPVNALSHAVRSGLVAALEQGQKDADAKVLLLVCEGRTFIAGADIREFGKP- 71
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
M D + VV+ E+ KPI+AA+ G ALGGGLE A+GCH R+A ++GLP
Sbjct: 72 -------MQDPGLPSVVDQYENSDKPIIAAIHGTALGGGLETALGCHYRVALSSAKVGLP 124
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 191
E+ LG++PG TQRLPRL G KA+EM+ + + +++ L ++DAV ++
Sbjct: 125 EVKLGLLPGAGGTQRLPRLTGAQKALEMITTGEFVGAKDALALSIVDAVEDGSDIKAAGL 184
Query: 192 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 251
+A +A KP R TDKL + + +V + R +K A + C+D +E
Sbjct: 185 AYAQKVADEGKPVRRVRDLTDKLQA-DKGSDVFEQFRAGLQKKARGLFSPFKCVDAVEAA 243
Query: 252 IVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVI 311
GV +E ++F E + GLVH FFA+R SKV ++ R +R V VI
Sbjct: 244 FSLPFEDGVKRERELFMECMESPQRAGLVHSFFAEREVSKVKGLSK-DTPVRDIRTVGVI 302
Query: 312 GGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALK 371
G G MG GIA I V + EV E L KG+ I N +G++TQ + +
Sbjct: 303 GAGTMGGGIAMNFANAGIPVTIAEVKQEALDKGLAVIRRNYENTAKKGRITQAQVEERMS 362
Query: 372 MLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEK 431
++ G L Y +F DVD+VIEAV ES LK+KIF +L+ AC P ILA+NTST+ ++ +
Sbjct: 363 LISGTLTYDDFSDVDLVIEAVFESRDLKRKIFGQLDDACKPGAILASNTSTLSIDDIAAA 422
Query: 432 TSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAV 491
T +IG HFFSPA+VM LLEIVR E+TS +V M + K I+KV V+VGNC GF
Sbjct: 423 TKRPQDVIGLHFFSPANVMKLLEIVRGEKTSDEVKATAMALAKKIRKVGVMVGNCYGFVG 482
Query: 492 NRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAF 551
NR A LV+ G ++D + G P+G F + DLAG + + +E KA
Sbjct: 483 NRMLHKRGAEAMALVNEGASPQQVDKVLTDLGFPMGQFAMSDLAGIDIGYSIRQERRKAG 542
Query: 552 PDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGS-KPKPDPSVLPIIEECRRLSNIMPGG 610
D + +D L + GR G+ G+Y YE+G+ KP PDP V +I E R I
Sbjct: 543 ED--VPASWMDKLAEQGRLGQKTQAGVYKYEEGNRKPIPDPEVDRVIAEFREEQGI---- 596
Query: 611 KPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADA 670
K +T++EI+E ++ +VNE ++LEEGI R+ D+D + G FP+YRGG +FWAD
Sbjct: 597 KSRDITDQEILERCMYVMVNEGAKILEEGIADRSLDIDITWIYGYGFPAYRGGPMFWADQ 656
Query: 671 VGANYVYTSLKK-WSQLYGNFFKPSRFLEERATKGIPLS 708
+G + + ++++ + L G +KP+ L++ ++G S
Sbjct: 657 IGLDIILGTVEQFYDDLGGEQWKPAALLQKLVSEGRKFS 695
>gi|355388879|gb|AER62382.1| hypothetical protein [Taeniatherum caput-medusae]
Length = 339
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 216/338 (63%), Positives = 270/338 (79%)
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
+R WALDI RKPWI+SL++TDKL L EARE+LK AR QA+K A N+ C+DVIE
Sbjct: 2 ARRWALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLICIDVIE 61
Query: 250 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 309
EGIV G +G+ KEA F+ L+ DT + L+HVFF+QRATSKVP TD+GL PR + KVA
Sbjct: 62 EGIVSGPRAGLWKEANAFQGLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKITKVA 121
Query: 310 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 369
++GGGLMGSGIATA IL+N V+LKEVN ++L GI ++AN++ V +GK+T+++ A
Sbjct: 122 ILGGGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRVKANLQSRVRKGKMTEERYEKA 181
Query: 370 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 429
L +L G L Y +FK+VD+VIEAVIE+V LKQ+IF++LEK CP HCILATNTSTIDLN++G
Sbjct: 182 LSLLSGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIG 241
Query: 430 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 489
EKT SQDRI+GAHFFSPAHVMPLLEIVRT+ TSAQV++DL+ VGK IKK P+VVGNCTGF
Sbjct: 242 EKTKSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGF 301
Query: 490 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIG 527
AVNR FFPY+QSA L V G+DV++ID A FG+P+G
Sbjct: 302 AVNRMFFPYTQSALLFVDYGMDVYKIDRACTKFGMPMG 339
>gi|355388869|gb|AER62377.1| hypothetical protein [Aegilops tauschii]
Length = 339
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 215/338 (63%), Positives = 270/338 (79%)
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
+R WALDI RKPWI+SL++TDKL L EARE+LK AR QA+K A N+ C+DVIE
Sbjct: 2 ARRWALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLVCIDVIE 61
Query: 250 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 309
EGI+ G +G+ KEA F+ L+ DT + L+HVFF+QRATSKVP TD+GL PR + KVA
Sbjct: 62 EGIISGPRAGLWKEANAFQSLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKITKVA 121
Query: 310 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 369
++GGGLMGSGIATA IL+N V+LKEVN ++L GI I+AN++ V +GK+T+++ A
Sbjct: 122 ILGGGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEKA 181
Query: 370 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 429
L ++ G L Y +FK+VD+VIEAVIE+V LKQ+IF++LEK CP HCILATNTSTIDLN++G
Sbjct: 182 LSLVTGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIG 241
Query: 430 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 489
EKT SQDRI+GAHFFSPAHVMPLLEIVRT+ TSAQV++DL+ VGK IKK P+VVGNCTGF
Sbjct: 242 EKTKSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGF 301
Query: 490 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIG 527
AVNR FFPY+QSA L V G+DV++ID A FG+P+G
Sbjct: 302 AVNRMFFPYTQSALLFVDYGMDVYKIDRACTKFGMPMG 339
>gi|146280495|ref|YP_001170648.1| enoyl-CoA hydratase [Pseudomonas stutzeri A1501]
gi|145568700|gb|ABP77806.1| enoyl-CoA hydratase [Pseudomonas stutzeri A1501]
Length = 701
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 258/696 (37%), Positives = 394/696 (56%), Gaps = 23/696 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A+I + NPPVNAL + GL D F +A +V A+VL G F G DI F K
Sbjct: 13 IALILVNNPPVNALGHAVRKGLLDAFRQADEAPEVTAVVLVCEGPTFMAGADIKEFGKPP 72
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
A S+ V+ +IE C+KP VA + G ALGGGLE+A+GCH RIA ++GLP
Sbjct: 73 QA--------PSLPEVIEVIEGCRKPSVAVIHGSALGGGLEVALGCHYRIARSDAKVGLP 124
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 191
E+ LG++PG TQRLPRL G+ KA+EM++ + I + E + ++D + + L++
Sbjct: 125 EVKLGLLPGAGGTQRLPRLAGVEKALEMIVSGQPIGAAEALEHHIVDELFEGD-LIEAGL 183
Query: 192 LWALDIAARRKPWIRSLHRTDKL-GSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 250
+A + + RS +T L G +EA +++ + K P + C+ +E
Sbjct: 184 TYARRLVEEGRGPRRSGEQTRGLEGVDNEA--LIRAKHAEVAKRMPGLFSPLRCIAAVEA 241
Query: 251 GIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKVA 309
G+ +E ++F E + L+H FFA+R K+ ++ +D+ L+P +R A
Sbjct: 242 ATRLPLAEGLKRERELFTECLNSPQRGALIHSFFAERQAGKIDDLPSDVKLRP--IRTAA 299
Query: 310 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 369
VIGGG MG GIA + + V L E+N E L +G++ V RG LT+D
Sbjct: 300 VIGGGTMGVGIALSFANTGVPVKLLEINDEALQRGLQRARETYAASVKRGSLTEDAMEQR 359
Query: 370 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 429
L ++ GV DY D D+V+EAV E + +KQ++F +L+ C P ILA+NTS++DLN +
Sbjct: 360 LALIAGVTDYGALADADVVVEAVFEEMGVKQQVFEQLDAVCKPGAILASNTSSLDLNAIA 419
Query: 430 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 489
T + ++G HFFSPA+VM LLE+VR ERTS +V+ M +GK +KKV VVVG C GF
Sbjct: 420 AFTKRPEDVVGLHFFSPANVMRLLEVVRGERTSDEVLATAMAIGKQLKKVSVVVGVCDGF 479
Query: 490 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDK 549
NR F Y + A L+ G ++D+A+R+FG+ +GPF + DL+G + A K
Sbjct: 480 VGNRMVFQYGREAEFLLEEGATPQQVDAALRNFGMAMGPFAMRDLSGLDIGQAIRKRQRA 539
Query: 550 AFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIMP 608
P + D L +G G+ G G Y YE G++ P+ +P + P++E R I
Sbjct: 540 TLPAHLDFPTVSDKLCAAGMLGQKTGAGYYRYEPGNRTPQENPDLAPMLEAASREKGI-- 597
Query: 609 GGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWA 668
+ ++ E+ IVE +F +VNE ++LEEGI R+SD+D + G FP++RGG +++A
Sbjct: 598 --ERKALDEQYIVERCIFALVNEGAKILEEGIAQRSSDIDVIYLNGYGFPAFRGGPMYYA 655
Query: 669 DAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
D+VG + V +K+ G+++KP+ LE+ A +G
Sbjct: 656 DSVGLDKVLARVKELHARCGDWWKPAPLLEKLAAEG 691
>gi|421616221|ref|ZP_16057236.1| enoyl-CoA hydratase [Pseudomonas stutzeri KOS6]
gi|409781796|gb|EKN61371.1| enoyl-CoA hydratase [Pseudomonas stutzeri KOS6]
Length = 701
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 261/704 (37%), Positives = 399/704 (56%), Gaps = 22/704 (3%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
V +EV D +A+IT+ NPPVNAL + AGL F++A + V+A++L G F G
Sbjct: 5 VRLEVQGD-IALITVSNPPVNALGHAVRAGLLQAFQDAETDSRVRAVILICQGSTFIAGA 63
Query: 66 DINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA 125
DI F K A S+ V++ IE C KP VA + G ALGGGLE+A+GCH RIA
Sbjct: 64 DIKEFGKPPQA--------PSLPEVIDTIESCSKPSVAVIHGTALGGGLEVALGCHYRIA 115
Query: 126 APKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 182
++GLPE+ LG++PG TQRLPRL G++KA++M++ + I++ E + +ID +
Sbjct: 116 RKDAKVGLPEVKLGLLPGAGGTQRLPRLAGVAKALDMIVSGQPISAAEALEHTIIDELFE 175
Query: 183 SEELLKVSRLWALDIAARRKPWIRSLHRTDKL-GSLSEAREVLKLARLQAKKTAPNMPQH 241
E L +A + + RS +T L G+ +EA +++ + K P +
Sbjct: 176 GE-LAAAGIGFARRLLDDGRGPRRSGEQTRGLEGADNEA--LIRAKHAEVAKRMPGLFSP 232
Query: 242 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 301
C+ +E + G+ +E ++F E + LVH FFA+R SK+ N +K
Sbjct: 233 LRCVAAVEAAVKLPLAEGLKRERELFVECLNSPQRGALVHSFFAERQASKI-NDLPADVK 291
Query: 302 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 361
PR + AVIGGG MG GIA + + V L E+N + LL+G++ V RG L
Sbjct: 292 PRAINSAAVIGGGTMGVGIALSFANAGLPVKLLEINEDALLRGLQRARDTYAASVKRGSL 351
Query: 362 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 421
T++ L ++ GV DY D D+V+EAV E + +K+++F +L+ C P ILA+NTS
Sbjct: 352 TEEAMEKRLSLVTGVTDYGALADADVVVEAVFEDMDVKRQVFEQLDAVCKPGAILASNTS 411
Query: 422 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 481
++DLN + T ++G HFFSPA+VM LLE+VR E+TS V+ M +GK +KKV V
Sbjct: 412 SLDLNAIATFTKRPQDVVGLHFFSPANVMRLLEVVRGEKTSDDVLATAMAIGKQLKKVSV 471
Query: 482 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAA 541
VVG C GF NR F Y + A L+ G ++D+A+R+FG+ +GPF + DL+G +
Sbjct: 472 VVGVCDGFVGNRMVFQYGREAEFLLEEGATPQQVDAALRNFGMAMGPFAMRDLSGLDIGQ 531
Query: 542 ATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEEC 600
A K P + D L ++G G+ G G Y YE G++ P +P++ P++E
Sbjct: 532 AIRKRQRATLPAHLDFPTVSDKLCEAGMLGQKTGAGYYRYEPGNRMPLENPALAPMLEAA 591
Query: 601 RRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSY 660
R I + + E+ I+E +F +VNE ++LEEGI R+SD+D + G FP++
Sbjct: 592 SREKGI----ERRELEEQYIIERTIFALVNEGAKILEEGIAQRSSDIDVIYLNGYGFPAF 647
Query: 661 RGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
RGG +F+AD+VG + V +++ G+++KP+ LE+ A +G
Sbjct: 648 RGGPMFYADSVGLDKVLARVRELHARCGDWWKPAPLLEKLAAEG 691
>gi|355388913|gb|AER62399.1| hypothetical protein [Aegilops speltoides var. ligustica]
Length = 325
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 208/323 (64%), Positives = 260/323 (80%)
Query: 193 WALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGI 252
WALDI RKPWI+SL++TDKL L EARE+LK AR QA+K A N+ C+DVIEEGI
Sbjct: 2 WALDICELRKPWIKSLYKTDKLEPLGEAREILKFARSQARKQAANLEHPLVCIDVIEEGI 61
Query: 253 VHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIG 312
+ G +G+ KEA F+ L+ DT + L+HVFF+QRATSKVP TD+GL PR + KVA++G
Sbjct: 62 ISGPRAGLWKEANAFQSLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKITKVAILG 121
Query: 313 GGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKM 372
GGLMGSGIATA IL+N V+LKEVN ++L GI I+AN++ V +GK+T+++ AL +
Sbjct: 122 GGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEKALSL 181
Query: 373 LKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKT 432
+ G L Y +FK+VD+VIEAVIE+V LKQ+IF++LEK CP HCILATNTSTIDLN++GEKT
Sbjct: 182 VTGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIGEKT 241
Query: 433 SSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVN 492
SQDRI+GAHFFSPAHVMPLLEIVRT+ TSAQV++DL+ VGK IKK P+VVGNCTGFAVN
Sbjct: 242 KSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGFAVN 301
Query: 493 RAFFPYSQSARLLVSLGVDVFRI 515
R FFPY+QSA L V G+DV++I
Sbjct: 302 RMFFPYTQSALLFVDYGMDVYKI 324
>gi|398806814|ref|ZP_10565713.1| 3-hydroxyacyl-CoA dehydrogenase [Polaromonas sp. CF318]
gi|398087179|gb|EJL77776.1| 3-hydroxyacyl-CoA dehydrogenase [Polaromonas sp. CF318]
Length = 702
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 272/704 (38%), Positives = 385/704 (54%), Gaps = 33/704 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA+ITL NPPVN L L D ++A + VKAIV+TG G FSGG DI F
Sbjct: 11 VALITLSNPPVNGLGHATRLSLTDNLQKANADAAVKAIVITGAGKAFSGGADIKEF---- 66
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G + + ++ V+ +E+ KP+VAA+ + +GGGLELA+GCH RIAAP T + LP
Sbjct: 67 --GTPKALTEPNLLSVIRAVENSAKPVVAAIHSVCMGGGLELALGCHYRIAAPGTNIALP 124
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSE-----EGWKLGLIDAVVTSEEL 186
E+ LG++PG TQRLPR++G+ A+ M++ + + SE G KL D + S E
Sbjct: 125 EVKLGLLPGAGGTQRLPRVLGVEPALNMIVSGEPVKSELLAQIPGQKL--FDKLAASPES 182
Query: 187 LKVSRL-WALDIAARRK-PWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 244
L L +A ++ R P +R L G + AR K A N P C
Sbjct: 183 LAQEALAFAQSVSDTRPLPLVRELRAKHPNGD-----AYFQFARNMVKGMAKNFPAPLKC 237
Query: 245 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRG 304
+D +E G+ E + F L+ SR L H+F A+RA SK+P+V + K R
Sbjct: 238 VDAVEAATKKKFEEGMALEREFFINLMWTPESRALRHIFMAERAASKIPDVPEDTPK-RE 296
Query: 305 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 364
+ VAVIG G MG GIA + + V + E+ E L KGI I+ N V +GKL QD
Sbjct: 297 INSVAVIGAGTMGGGIAMNFLNAGVPVKILEMKQEALDKGIGIIKKNYEAQVKKGKLKQD 356
Query: 365 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 424
K + +L L Y + KD DMVIEAV E + +K+K+F EL++ P ILA+NTST+D
Sbjct: 357 KYEQRMSLLSTTLSYDDLKDADMVIEAVFEDMGVKEKVFKELDRVMKPGAILASNTSTLD 416
Query: 425 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 484
+N + T ++G HFFSPA+VM LLE+VR +T V+ +M VGK IKK VV G
Sbjct: 417 VNQIAAFTKRPQDVVGMHFFSPANVMKLLEVVRGAKTGKDVLATVMAVGKKIKKTAVVSG 476
Query: 485 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATS 544
C GF NR Y + L+ G ++D AI FG +GPF++ DLAG + A
Sbjct: 477 VCDGFIGNRMIEQYGRQGGFLLDEGCTPEQVDKAIEKFGFAMGPFRMGDLAGNDIGWAIR 536
Query: 545 KEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVLPIIEECRRL 603
K PD + S DLL + GR G+ G G Y Y G + P+ V+ +IE+ R
Sbjct: 537 KRRYTEKPDMKY-SKTADLLCEKGRFGQKTGAGWYDYVPGKRDAIPNAEVVKMIEDHRAS 595
Query: 604 SNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGG 663
I P ++++EIV+ ++F +VNE+ +LEEGI +ASD+D ++G FP YRGG
Sbjct: 596 LGITPR----KISDEEIVQRLVFSLVNEAAHILEEGIASKASDIDMVYIMGYGFPVYRGG 651
Query: 664 IVFWADAVGANYVYTSLKKWSQL---YGNFFKPSRFLEERATKG 704
+ +AD +G V S+ +++Q F+KP+ L + A +G
Sbjct: 652 PMLYADQLGLFNVVQSMNRFAQNPLDDAKFWKPAPLLAKLAAEG 695
>gi|355388907|gb|AER62396.1| hypothetical protein [Hordeum marinum subsp. marinum]
Length = 337
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 216/336 (64%), Positives = 269/336 (80%)
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
+R WALDI RKPWI+SL++TDKL L EARE+LK AR QA+K A N+ C+DVIE
Sbjct: 2 ARRWALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLVCIDVIE 61
Query: 250 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 309
EGIV G +G+ KEA F+ L+ DT + L+HVFF+QRATSKVP TD+GL PR + KVA
Sbjct: 62 EGIVSGPRAGLWKEANAFQSLLFSDTCKCLLHVFFSQRATSKVPGATDLGLMPRKITKVA 121
Query: 310 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 369
++GGGLMGSGIATA IL+N V+LKEVN ++L GI I+AN++ V +GK+T+++ A
Sbjct: 122 ILGGGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEKA 181
Query: 370 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 429
L ++ G L Y +FK+VD+VIEAVIE+V LKQ+IF++LEK CP HCILATNTSTIDLN++G
Sbjct: 182 LSLVTGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIG 241
Query: 430 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 489
EKT SQDRI+GAHFFSPAHVMPLLEIVRT+ TSAQV++DL+ VGK IKK P+VVGNCTGF
Sbjct: 242 EKTKSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGF 301
Query: 490 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLP 525
AVNR FFPY+QSA LLV G+DV++ID A FG+P
Sbjct: 302 AVNRMFFPYTQSALLLVDYGMDVYKIDRACTKFGMP 337
>gi|355388919|gb|AER62402.1| hypothetical protein [Dasypyrum villosum]
Length = 337
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 215/336 (63%), Positives = 267/336 (79%)
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
+R WALDI RKPWI+SL++TDKL L EARE+LK AR QA+K A N+ C+DVIE
Sbjct: 2 ARRWALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLVCIDVIE 61
Query: 250 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 309
EGIV G +G+ KEA F+ L+ DT + L+HVFF+QRATSKVP TD+GL PR + KVA
Sbjct: 62 EGIVSGPRAGLWKEANAFQSLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKITKVA 121
Query: 310 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 369
++GGGLMGSGIATA IL+N V+LKEVN ++L GI I+AN++ V +GK+T+ + A
Sbjct: 122 ILGGGLMGSGIATAMILSNYPVILKEVNEKFLBAGIDRIKANLQSRVRKGKMTEQRYEKA 181
Query: 370 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 429
L ++ G L Y +FK+VD+VIEAVIE+V LKQ+IF++LEK CP HCILATNTSTIDLN++G
Sbjct: 182 LSLVTGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIG 241
Query: 430 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 489
EKT SQDRI+GAHFFSPAHVMPLLEIVRT+ TSAQV++DL+ VGK IKK P+VVGNCTGF
Sbjct: 242 EKTKSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGF 301
Query: 490 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLP 525
AVNR FFPY+QSA L V G+DV++ID A FG+P
Sbjct: 302 AVNRMFFPYTQSALLFVDYGMDVYKIDRACTKFGMP 337
>gi|355388885|gb|AER62385.1| hypothetical protein [Dasypyrum villosum]
Length = 337
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 215/336 (63%), Positives = 267/336 (79%)
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
+R WALDI RKPWI+SL++TDKL L EARE+LK AR QA+K A N+ C+DVIE
Sbjct: 2 ARRWALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLVCIDVIE 61
Query: 250 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 309
EGIV G +G+ KEA F+ L+ DT + L+HVFF+QRATSKVP TD+GL PR + KVA
Sbjct: 62 EGIVSGPRAGLWKEANAFQSLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKITKVA 121
Query: 310 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 369
++GGGLMGSGIATA IL+N V+LKEVN ++L GI I+AN++ V +GK+T+ + A
Sbjct: 122 ILGGGLMGSGIATAMILSNYPVILKEVNEKFLNAGIDRIKANLQSRVRKGKMTEQRYEKA 181
Query: 370 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 429
L ++ G L Y +FK+VD+VIEAVIE+V LKQ+IF++LEK CP HCILATNTSTIDLN++G
Sbjct: 182 LSLVTGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIG 241
Query: 430 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 489
EKT SQDRI+GAHFFSPAHVMPLLEIVRT+ TSAQV++DL+ VGK IKK P+VVGNCTGF
Sbjct: 242 EKTKSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGF 301
Query: 490 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLP 525
AVNR FFPY+QSA L V G+DV++ID A FG+P
Sbjct: 302 AVNRMFFPYTQSALLFVDYGMDVYKIDRACTKFGMP 337
>gi|355388871|gb|AER62378.1| hypothetical protein [Dasypyrum villosum]
Length = 338
Score = 441 bits (1133), Expect = e-120, Method: Compositional matrix adjust.
Identities = 214/337 (63%), Positives = 268/337 (79%)
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
+R WALDI RKPWI+SL++TDKL L EARE+LK AR QA+K A N+ C+DVIE
Sbjct: 2 ARRWALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLVCIDVIE 61
Query: 250 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 309
EG+V G +G+ KEA F+ L+ DT + L+HVFF+QRATSKVP TD+GL PR + KVA
Sbjct: 62 EGVVSGPRAGLWKEANAFQSLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKITKVA 121
Query: 310 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 369
++GGGLMGSGIATA IL+N V+LKEVN ++L GI I+AN++ V +GK+T+ + A
Sbjct: 122 ILGGGLMGSGIATAMILSNYPVILKEVNEKFLNAGIDRIKANLQSRVRKGKMTEQRYEKA 181
Query: 370 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 429
L ++ G L Y +FK+VD+VIEAVIE+V LKQ+IF++LEK CP HCILATNTSTIDLN++G
Sbjct: 182 LSLVTGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIG 241
Query: 430 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 489
EKT SQDRI+GAHFFSPAHVMPLLEIVRT+ TSAQV++DL+ VGK IKK P+VVGNCTGF
Sbjct: 242 EKTKSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGF 301
Query: 490 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPI 526
AVNR FFPY+QSA L V G+DV++ID A FG+P+
Sbjct: 302 AVNRMFFPYTQSALLFVDYGMDVYKIDRACTKFGMPM 338
>gi|355388883|gb|AER62384.1| hypothetical protein [Dasypyrum villosum]
Length = 337
Score = 441 bits (1133), Expect = e-120, Method: Compositional matrix adjust.
Identities = 215/336 (63%), Positives = 267/336 (79%)
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
+R WALDI RKPWI+SL++TDKL L EARE+LK AR QA+K A N+ C+DVIE
Sbjct: 2 ARRWALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLVCIDVIE 61
Query: 250 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 309
EGIV G +G+ KEA F+ L+ DT + L+HVFF+QRATSKVP TD+GL PR + KVA
Sbjct: 62 EGIVSGPRAGLWKEANAFQSLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKITKVA 121
Query: 310 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 369
++GGGLMGSGIATA IL+N V+LKEVN ++L GI I+AN++ V +GK+T+ + A
Sbjct: 122 ILGGGLMGSGIATAMILSNYPVILKEVNEKFLDAGIDRIKANLQSRVRKGKMTEQRYEKA 181
Query: 370 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 429
L ++ G L Y +FK+VD+VIEAVIE+V LKQ+IF++LEK CP HCILATNTSTIDLN++G
Sbjct: 182 LSLVTGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIG 241
Query: 430 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 489
EKT SQDRI+GAHFFSPAHVMPLLEIVRT+ TSAQV++DL+ VGK IKK P+VVGNCTGF
Sbjct: 242 EKTKSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGF 301
Query: 490 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLP 525
AVNR FFPY+QSA L V G+DV++ID A FG+P
Sbjct: 302 AVNRMFFPYTQSALLFVDYGMDVYKIDRACTKFGMP 337
>gi|355388887|gb|AER62386.1| hypothetical protein [Agropyron mongolicum]
Length = 335
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 216/335 (64%), Positives = 267/335 (79%)
Query: 191 RLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 250
R WALDI RKPWI+SL++TDKL L EARE+LK AR QA+K A N+ C+DVIEE
Sbjct: 1 RRWALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLVCIDVIEE 60
Query: 251 GIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAV 310
GIV G +G+ KEA F+ L+ DT + L+HVFF+QRATSKVP TD+GL PR + KVA+
Sbjct: 61 GIVSGPRAGLWKEANAFQGLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKIMKVAI 120
Query: 311 IGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNAL 370
+GGGLMGSGIATA IL+N V+LKEVN ++L GI I+AN++ V +GK+T+++ AL
Sbjct: 121 LGGGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEKAL 180
Query: 371 KMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGE 430
+L G L Y +FK+VD+VIEAVIE+V LKQ+IF++LEK CP HCILATNTSTIDLN++GE
Sbjct: 181 SLLSGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIGE 240
Query: 431 KTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFA 490
KT SQDRI+GAHFFSPAHVMPLLEIVRT+ TSAQV++DL+ VGK IKK P+VVGNCTGFA
Sbjct: 241 KTKSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGFA 300
Query: 491 VNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLP 525
VNR FFPY+QSA L V G+DV++ID A FG+P
Sbjct: 301 VNRMFFPYTQSALLFVDYGMDVYKIDRACTKFGMP 335
>gi|209963882|ref|YP_002296797.1| peroxisomal bifunctional enzyme [Rhodospirillum centenum SW]
gi|209957348|gb|ACI97984.1| peroxisomal bifunctional enzyme [Rhodospirillum centenum SW]
Length = 698
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 263/701 (37%), Positives = 389/701 (55%), Gaps = 26/701 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
V +I + NPPVNAL+ + GL D + D +A+VL G G F G DI F
Sbjct: 13 VGVILVENPPVNALSQAVRQGLLDALRQGLEDDGARALVLAGGGRTFIAGADIAEF---- 68
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G PD++ V+ E KP+VAA+ G ALGGGLE+A+GCH R+A K +GLP
Sbjct: 69 --GRPLAPPDLND--VIAAFEGAAKPVVAAIHGTALGGGLEVALGCHYRVAVAKAMVGLP 124
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 191
E+ LG++PG TQRLPRLVG A+ M+ + + + + +LG++DA+V + + R
Sbjct: 125 EVKLGILPGAGGTQRLPRLVGAHVALTMITSGEFVPAPKAHELGILDAIVEGDPVDGAVR 184
Query: 192 LW-ALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 250
ALD+A P+ R R +++ + V R +KTA + Q C+D ++
Sbjct: 185 FAEALDLAG---PYPRVRDRAERIAA-DRGSAVFDEKRRALEKTARGLFAPQRCVDAVQA 240
Query: 251 GIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKVA 309
G+ +E ++F + + S L+HVFFA+RA K+P+V D +P V A
Sbjct: 241 AAELPFEEGLKRERELFGQCMAHPQSAALIHVFFAERAIGKIPDVPADTPARP--VATAA 298
Query: 310 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 369
V+G G MG GIA I V L E + E L +G+ TI N G V +G+LTQ + +
Sbjct: 299 VLGAGTMGGGIAMNFANAGIPVTLLETSQEALDRGLATIARNYAGTVAKGRLTQAEMDRR 358
Query: 370 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 429
L ++ LD + DMV+EAV E + +KQ +F L+ P +LATNTST+D++ +
Sbjct: 359 LSLITPTLDMAALAGADMVVEAVFEDMAVKQDVFRRLDTVAKPGAVLATNTSTLDIDAIA 418
Query: 430 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 489
TS +IG HFFSPA+VM LLE+VR T+ VI M G+ I KV V+VGNC GF
Sbjct: 419 AVTSRPADVIGMHFFSPANVMKLLEVVRGSATARDVIATAMQTGRKIGKVSVLVGNCDGF 478
Query: 490 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDK 549
NR PYS+ A LLV G ++D A++ +G+ +GPF + DLAG V + +
Sbjct: 479 VGNRMLMPYSRQAELLVEEGAWPEQVDKALQDWGMAMGPFAMGDLAGVDVTWRIRQR--R 536
Query: 550 AFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIMP 608
++ SPL D L R G+ G G + YE GS+ P PD V +IE R I
Sbjct: 537 LAEGKAAGSPLTDRLYLMDRYGQKTGAGWFRYEAGSRTPLPDDVVKRMIENHRETHQI-- 594
Query: 609 GGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWA 668
+P +++++EIV+ +++ +VNE + LEEG+ +RASD+D + G FP++RGG + +A
Sbjct: 595 --QPRAISDEEIVKRMIYALVNEGAKALEEGMALRASDIDVIYLYGYGFPAWRGGPMHYA 652
Query: 669 DAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSA 709
D+VG V ++ + Q +G + P+ LE A +G +A
Sbjct: 653 DSVGLPTVLADIRDFQQRFGGDWTPAPLLERLAAEGSSFAA 693
>gi|355388905|gb|AER62395.1| hypothetical protein [Hordeum bogdanii]
Length = 338
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 215/337 (63%), Positives = 269/337 (79%)
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
+R WALDI +KPWI+SL++TDKL L EARE+LK AR QA+K A N+ C+DVIE
Sbjct: 2 ARRWALDICELKKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLICIDVIE 61
Query: 250 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 309
EGIV G +G+ KEA F+ L+ DT + L+HVFF+QRATSKVP TD+GL PR + KVA
Sbjct: 62 EGIVSGPRAGLWKEANAFQGLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKIMKVA 121
Query: 310 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 369
++GGGLMGSGIATA IL+N V+LKEVN ++L GI I+AN++ V +GK+T+++ A
Sbjct: 122 ILGGGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEKA 181
Query: 370 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 429
L +L G L Y +FK+VD+VIEAVIE+V LKQ+IF++LEK CP HCILATNTSTIDLN++G
Sbjct: 182 LSLLSGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIG 241
Query: 430 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 489
EKT SQDRI+GAHFFSPAHVMPLLEIVRT+ TSAQV++DL+ VGK IKK P+VVGNCTGF
Sbjct: 242 EKTKSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGF 301
Query: 490 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPI 526
AVNR FFPY+QSA L V G+DV++ID A FG+P+
Sbjct: 302 AVNRMFFPYTQSALLFVDYGMDVYKIDRACTKFGMPM 338
>gi|355388923|gb|AER62404.1| hypothetical protein [Secale cereale]
Length = 335
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 215/335 (64%), Positives = 266/335 (79%)
Query: 191 RLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 250
R WALDI RKPWI+SL++TDKL L EARE+LK AR QA+K A N+ C+DVIEE
Sbjct: 1 RRWALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLXCIDVIEE 60
Query: 251 GIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAV 310
GIV G +G+ KEA F+ L+ DT + L+HVFF+QRATSKVP TD+GL PR + KVA+
Sbjct: 61 GIVSGPRAGLWKEANXFQGLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKITKVAI 120
Query: 311 IGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNAL 370
+GGGLMGSGIATA IL+N V+LKEVN ++L GI I+AN++ V +GK+T+++ AL
Sbjct: 121 LGGGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEKAL 180
Query: 371 KMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGE 430
+ G L Y +FK+VD+VIEAVIE+V LKQ+IF++LEK CP HCILATNTSTIDLN++GE
Sbjct: 181 SLXXGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIGE 240
Query: 431 KTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFA 490
KT SQDRI+GAHFFSPAHVMPLLEIVRT+ TSAQV++DL+ VGK IKK P+VVGNCTGFA
Sbjct: 241 KTKSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGFA 300
Query: 491 VNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLP 525
VNR FFPY+QSA L V G+DV++ID A FG+P
Sbjct: 301 VNRMFFPYTQSALLFVDYGMDVYKIDRACTKFGMP 335
>gi|78066676|ref|YP_369445.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia sp. 383]
gi|77967421|gb|ABB08801.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
[Burkholderia sp. 383]
Length = 694
Score = 437 bits (1124), Expect = e-119, Method: Compositional matrix adjust.
Identities = 256/676 (37%), Positives = 380/676 (56%), Gaps = 20/676 (2%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA++TL NPPVN L + G+ D + A V AIVLTG G FSGG DI F
Sbjct: 9 DGVAVLTLNNPPVNGLGLSTRQGVMDALDRAVQDPSVTAIVLTGAGRAFSGGADITEFNT 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + ++ V++ +E KP+VAA+ + +GGGLELA+G H R+AAP Q+
Sbjct: 69 PKA------LQEPTLHTVIHAVEASAKPVVAALHSVVMGGGLELALGAHYRVAAPGAQVA 122
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 189
LPE+ LG++PG TQRLPR VGL A+ M++ + SE+ K GL D + + LL
Sbjct: 123 LPEVKLGLLPGAGGTQRLPRAVGLETALNMIVSGAPVPSEQLAKSGLFDEMADGD-LLDA 181
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
+ +A + A++ P R D+ + A ++ AR A+ APN P C+D IE
Sbjct: 182 AVAFARKVGAQKGPHPRV---RDRKIVHANAAGFIQFARNSARAAAPNFPAPHKCIDAIE 238
Query: 250 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKV 308
G++HG G + E + F L+M SR L H FF +RA SK+P+V D L R +R+V
Sbjct: 239 AGVLHGFDKGSVAEREGFVALMMTPESRALRHAFFGERAASKIPDVPADTPL--REIRRV 296
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
VIG G MG GIA + + V L E + L +G+ TI N V +GKLTQ+K +
Sbjct: 297 GVIGAGTMGGGIAMNFVNAGLPVTLLETKQDALERGVATIRKNYDAQVKKGKLTQEKLDA 356
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
+ ++ L Y + KD D+++EAV E + +K+++F +L++ ILA+NTST+D++ +
Sbjct: 357 RMALITPTLSYDDLKDADLIVEAVFEELGVKEQVFKKLDEVAKAGAILASNTSTLDVDKI 416
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
T ++G HFFSPA+VM LLE+VR +T+ V+ +M V K I+K VV G C G
Sbjct: 417 AAFTKRPQDVVGMHFFSPANVMKLLEVVRGAQTAKDVLATVMAVAKKIRKTAVVSGVCDG 476
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR Y + A ++ G ++D AI FG +GPF++ DLAG + A K
Sbjct: 477 FIGNRMIEQYIRQALFMLEEGALPAQVDRAIEKFGFAMGPFRMSDLAGNDIGWAIRKRRY 536
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMP 608
PD + S + D L + GR G+ G G Y Y G + K PS L ++E +
Sbjct: 537 IEQPDLQY-SKIADHLCEQGRFGQKTGAGWYDYVPGDR-KAKPSSL--VDEMVVAYSKER 592
Query: 609 GGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWA 668
G + + + EIVE ++F + NE ++LEE I +ASD+D + G FP +RGG + +A
Sbjct: 593 GVERRKIGDDEIVERLVFALANEGAKILEEKIASKASDIDMVYLTGYGFPLWRGGPMLYA 652
Query: 669 DAVGANYVYTSLKKWS 684
DAVG V ++++++
Sbjct: 653 DAVGLYNVERAIRRYA 668
>gi|170733265|ref|YP_001765212.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia cenocepacia MC0-3]
gi|169816507|gb|ACA91090.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia
cenocepacia MC0-3]
Length = 694
Score = 437 bits (1124), Expect = e-119, Method: Compositional matrix adjust.
Identities = 259/676 (38%), Positives = 379/676 (56%), Gaps = 20/676 (2%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVN L + G+ D + A V AIVLTG G FSGG DI F
Sbjct: 9 DGVAVITLNNPPVNGLGLSTRQGVMDALDRAARDPSVTAIVLTGAGRAFSGGADITEFNT 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + ++ V+ +E KP+VAA+ + +GGGLELA+G H R+AAP Q+
Sbjct: 69 PKA------LQEPTLHTVIRAVEVSAKPVVAALHSVVMGGGLELALGAHYRVAAPGAQVA 122
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 189
LPE+ LG++PG TQRLPR VGL A+ M++ + SE+ K GL D + + LL
Sbjct: 123 LPEVKLGLLPGAGGTQRLPRAVGLETALNMIVSGAPVPSEQLAKSGLFDEMADGD-LLDA 181
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
+ +A + A++ P R D+ A ++ AR A+ APN P C+D IE
Sbjct: 182 AVAFARKVGAQKGPHPRV---RDRKIVHENAAGFIQFARNSARAAAPNYPAPHKCIDAIE 238
Query: 250 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKV 308
G+++G G + E + F L+M SR L H FF +RA SK+P+V D L R +R+V
Sbjct: 239 AGVLNGFDKGSVAEREGFVALMMTPESRALRHAFFGERAASKIPDVPADTPL--REIRRV 296
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
VIG G MG GIA I + V L E + L +G+ TI N V +GKLTQ+K +
Sbjct: 297 GVIGAGTMGGGIAMNFINAGLPVTLLETKQDALERGLATIRKNYDAQVKKGKLTQEKLDA 356
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
L ++ L Y + KD D+++EAV E + +K+++F +L++ P ILA+NTST+D++ +
Sbjct: 357 RLALITPTLSYDDLKDADLIVEAVFEELGVKEQVFRKLDEVAKPGAILASNTSTLDVDKI 416
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
T ++G HFFSPA+VM LLE+VR +T+ V+ +M V K I+K VV G C G
Sbjct: 417 AAFTKRPQDVVGMHFFSPANVMKLLEVVRGAQTAKDVLATVMAVAKKIRKTAVVSGVCDG 476
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR Y + A ++ G ++D AI FG +GPF++ DLAG + A K
Sbjct: 477 FIGNRMIEQYIRQALFMLEEGALPAQVDRAIEKFGFAMGPFRMSDLAGNDIGWAIRKRRY 536
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMP 608
PD + S + D L + GR G+ G G Y Y G + K PS L ++E +
Sbjct: 537 VEQPDLQY-SKIADRLCEKGRFGQKTGAGWYDYVPGDR-KAKPSSL--VDEMVVAYSKER 592
Query: 609 GGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWA 668
G + + + EIVE ++F +VNE ++LEE I +ASD+D + G FP +RGG + +A
Sbjct: 593 GVERRKIGDDEIVERLVFALVNEGAKILEEKIASKASDIDMVYLTGYGFPLWRGGPMLYA 652
Query: 669 DAVGANYVYTSLKKWS 684
D VG V ++++++
Sbjct: 653 DTVGLYNVERAIRRYA 668
>gi|17546478|ref|NP_519880.1| trifunctonal enoyl-CoA hydratase/delta3-cis-delta2-trans-enoyl-CoA
isomerase/3-hydroxyacyl-CoA dehydrogenase [Ralstonia
solanacearum GMI1000]
gi|17428776|emb|CAD15461.1| probable trifunctonal: enoyl-coa hydratase and
delta3-cis-delta2-trans-enoyl-coa isomerase and
3-hydroxyacyl-coa dehydrogenase oxidoreductase protein
[Ralstonia solanacearum GMI1000]
Length = 706
Score = 437 bits (1124), Expect = e-119, Method: Compositional matrix adjust.
Identities = 270/700 (38%), Positives = 383/700 (54%), Gaps = 26/700 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DGVA+ITL NPPVN L G+ + A DVKAIV+TG G FSGG DI F
Sbjct: 21 QDGVAVITLSNPPVNGLGHATRLGIVEGMVRAGDDPDVKAIVITGAGKAFSGGADIREFN 80
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
M + ++ V+ +E KP+VAA+ +A+GGGLELAMGCH R+AAP Q+
Sbjct: 81 TPKA------MQEPTLHAVIQAVESSGKPVVAAIHSVAMGGGLELAMGCHYRVAAPGAQI 134
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
LPE+ LG++PG TQRLPR +GL A+ M++ ++ SE+ K GL D ++ + L+
Sbjct: 135 ALPEVKLGILPGAGGTQRLPRAIGLEPALNMIVSGTAVPSEQLAKSGLFDQMIEGD-LMA 193
Query: 189 VSRLWALDIAARRK-PWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDV 247
+ +AL AA K P +R D+ L+ AR A N P C+D
Sbjct: 194 GAIGFALKAAAEGKLPKLR-----DRKVEHDNPEGFLQFARNTVAAVAKNFPAPGKCVDA 248
Query: 248 IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRK 307
++ + G+ E +F LV SR L H FF +RA SK+P+V + R V
Sbjct: 249 VQAAVEKRFDDGIRFERDLFIALVNTTESRALRHAFFGERAASKIPDVPE-DTPVRKVET 307
Query: 308 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 367
VAVIG G MG GIA + I V + E E L +GI TI N +GKLT K
Sbjct: 308 VAVIGAGTMGGGIAMNFLNAGIPVTILETKQEALDRGIATIRKNYESSAKKGKLTPGKVE 367
Query: 368 NALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 427
+ +LK L Y + +D D+VIEAV E + +K+ +F L+ P ILA+NTST+D++
Sbjct: 368 ARMALLKPTLSYDDIRDADLVIEAVFEDMGVKETVFKTLDAVAKPGAILASNTSTLDVDR 427
Query: 428 VGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 487
+ T ++G HFFSPA+VM LLE+VR + T+ V+ +M + K IKK VV G C
Sbjct: 428 IAGFTQRPQDVVGMHFFSPANVMKLLEVVRGKATAKDVLATVMKLAKAIKKTAVVSGVCD 487
Query: 488 GFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEF 547
GF NR YS+ A L+ G ++D A+ +FG +GPF++ DLAG + A K
Sbjct: 488 GFIGNRMIEQYSRQAGYLLDEGALPEQVDRAVETFGFAMGPFRMGDLAGNDIGWAIRKRR 547
Query: 548 DKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGS-KPKPDPSVLP-IIEECRRLSN 605
PD + S DLL + GR G+ G G Y Y+ G KP P V II+ + L
Sbjct: 548 AVDKPDIVY-SKTADLLCEKGRYGQKTGAGWYDYKAGDRKPYPSQEVNDMIIQHSKDL-- 604
Query: 606 IMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIV 665
G ++++EIVE ++F +VNE ++LEEGI +ASD+D + G FP +RGG +
Sbjct: 605 ---GITRRKISDEEIVERLVFALVNEGAKILEEGIASKASDIDMVYLTGYGFPLFRGGPM 661
Query: 666 FWADAVGANYVYTSLKKWSQLY-GNFFKPSRFLEERATKG 704
+AD VG V +++++ + Y G +KP+ L++ A G
Sbjct: 662 LYADTVGLYNVAQAMRRYGKGYHGEAWKPAPLLQKLADAG 701
>gi|355388909|gb|AER62397.1| hypothetical protein [Aegilops longissima]
Length = 335
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 214/335 (63%), Positives = 266/335 (79%)
Query: 191 RLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 250
R WALDI RKPWI+SL++TDKL L EARE+LK AR QA+K A N+ C+DVIEE
Sbjct: 1 RRWALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLVCIDVIEE 60
Query: 251 GIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAV 310
GIV G +G+ KEA F+ L+ DT + L+HVFF+QRATSKVP TD+GL PR + KVA+
Sbjct: 61 GIVSGPRAGLWKEANAFQSLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKITKVAI 120
Query: 311 IGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNAL 370
+GGGLMGSGIATA IL+N V+LKEVN ++L GI I+AN++ V +GK+T+++ AL
Sbjct: 121 LGGGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEKAL 180
Query: 371 KMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGE 430
++ G L Y +FK+VD+VIEAVIE+V LKQ+IF++LEK CP HCILATNTSTIDLN++GE
Sbjct: 181 SLVTGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIGE 240
Query: 431 KTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFA 490
KT SQDRI+GAHFFSPAHVMPLLEIV T+ TSAQV++DL+ VGK IKK P+VVGNCTGFA
Sbjct: 241 KTKSQDRIVGAHFFSPAHVMPLLEIVCTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGFA 300
Query: 491 VNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLP 525
VNR FFPY+QSA L V G+DV++ID A FG+P
Sbjct: 301 VNRMFFPYTQSALLFVDYGMDVYKIDRACTKFGMP 335
>gi|91788435|ref|YP_549387.1| 3-hydroxyacyl-CoA dehydrogenase [Polaromonas sp. JS666]
gi|91697660|gb|ABE44489.1| 3-hydroxyacyl-CoA dehydrogenase [Polaromonas sp. JS666]
Length = 699
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 273/704 (38%), Positives = 391/704 (55%), Gaps = 33/704 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA+ITL NPPVN L + + D ++A + VK+IVLTG G FSGG DI F
Sbjct: 11 VALITLDNPPVNGLGYATRSSITDNLQKANADAAVKSIVLTGAGKAFSGGADIKEF---- 66
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G L P++ V+ +E+ KP+VAA+ + +GGGLELA+GCH RIAAP + LP
Sbjct: 67 GTPKALLEPNLLS--VIRAVENSSKPVVAAIHTVCMGGGLELALGCHYRIAAPGCSVALP 124
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSE-----EGWKLGLIDAVVTSEEL 186
E+ LG++PG TQRLPR VG+ A+ M++ + + SE G KL D + S E
Sbjct: 125 EVKLGLLPGAGGTQRLPRTVGVEPALNMIVSGEPVKSELLAQIPGQKL--FDRMAASPES 182
Query: 187 LKVSRL-WALDIAARRK-PWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 244
L L +A IA R P +R+L G + AR K A N P C
Sbjct: 183 LAEDALAFAQSIADTRPLPLVRNLPCKHPDGD-----AYFQFARNMVKGMAKNFPAPLKC 237
Query: 245 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRG 304
+D +E G+ E ++F L+ SR L H+F A+RA SK+P+V + + R
Sbjct: 238 VDAVEAATKKKFEDGLAFERELFINLMWTPESRALRHIFMAERAASKIPDVPEDTPR-RE 296
Query: 305 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 364
++ +AVIG G MG GI+ + I V + E+ E L +GI TI N V +GKL QD
Sbjct: 297 IKSIAVIGAGTMGGGISMNFLNAGIPVKILEMKQEALDRGIATIRKNYESQVKKGKLKQD 356
Query: 365 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 424
K + +L L Y + KD DMVIEAV E + +K+K+ EL++ P ILA+NTST+D
Sbjct: 357 KYEQRMSLLSTTLSYDDLKDADMVIEAVFEEMGVKEKVLKELDRVMKPGAILASNTSTLD 416
Query: 425 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 484
+N + T +IG HFFSPA+VM LLE+VR E+T+ V+ +M +GK IKK VV G
Sbjct: 417 MNQIASFTKRPQDVIGTHFFSPANVMKLLEVVRGEKTAKDVLATVMALGKKIKKTAVVSG 476
Query: 485 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATS 544
C GF NR YS+ A L+ G ++D A+ FG +GPF++ DLAG + A
Sbjct: 477 VCDGFIGNRMIEQYSRQAGFLLEEGATPAQVDKAVEKFGFAMGPFRMGDLAGNDIGWAIR 536
Query: 545 KEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVLPIIEECRRL 603
K + P + S DLL + GR G+ G G Y Y G + P V+ +IE+ R+
Sbjct: 537 KRRYQEKPGMKY-SKTADLLCEMGRYGQKTGAGWYDYVPGKRDAIPSQVVVDMIEKHRK- 594
Query: 604 SNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGG 663
+I G P ++++EIVE +++ +VNE+ +LEEGI +ASD+D + G FP +RGG
Sbjct: 595 -DI--GVTPRRISDEEIVERLVYSLVNEAAHILEEGIASKASDIDMVYLTGYGFPLHRGG 651
Query: 664 IVFWADAVGANYVYTSLKKWSQL---YGNFFKPSRFLEERATKG 704
+ +AD +G V S+ +++Q +F+KP+ L A +G
Sbjct: 652 PMLYADQMGLFNVVQSMNRFAQNPLDDASFWKPAPLLARLAAEG 695
>gi|388568321|ref|ZP_10154741.1| 3-hydroxyacyl-CoA dehydrogenase [Hydrogenophaga sp. PBC]
gi|388264521|gb|EIK90091.1| 3-hydroxyacyl-CoA dehydrogenase [Hydrogenophaga sp. PBC]
Length = 704
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 263/706 (37%), Positives = 394/706 (55%), Gaps = 33/706 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A+ITL NPPVN L + G+ E+A + VKA+VLTG G FSGG DI F
Sbjct: 11 IALITLNNPPVNGLGLATRQGITAGLEQAQADPAVKAVVLTGAGKAFSGGADIKEFGTPK 70
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
+ +L+ V+ +E+C KP+VAA+ +A+GGGLEL++GCH RIAAP + LP
Sbjct: 71 ALAEPNLLS------VILAVENCSKPVVAAIHSVAMGGGLELSLGCHYRIAAPGANIALP 124
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKL---GLIDAVVTS-EELL 187
E+ LG+IPG TQRLPR++G+ A+ M++ + + SE +L L D + +S E+L
Sbjct: 125 EVKLGLIPGAGGTQRLPRVLGVEAALNMIVSGEPVKSEMLAQLPGQKLFDKMASSPEKLA 184
Query: 188 KVSRLWALDIAARRK-----PWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQ 242
+ + +A ++AA+ P +R+L K G + AR K A N P
Sbjct: 185 EEAIAFAKEVAAKHADGSPLPLVRNLPCKHKDGD-----AYFQFARNMVKGMAKNFPAPA 239
Query: 243 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 302
C+D +E G+L E ++F L+ R L H+F A+RA SK+P+V +
Sbjct: 240 KCVDAVEAATKQKFDQGMLTEREMFINLMWTPECRALRHLFMAERAASKIPDVPE-DTPQ 298
Query: 303 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 362
R + KVAVIG G MG GI+ + I V + E+ E L +G+ + N V +GKL
Sbjct: 299 RKIEKVAVIGAGTMGGGISMNFLNAGIPVTILEMKQEALDRGVGVMRGNYEAQVKKGKLK 358
Query: 363 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 422
QDK + + +LK ++Y + KD D+VIEAV E + +K+ +F +L++ P ILA+NTST
Sbjct: 359 QDKLDARMGLLKTTVNYEDIKDADLVIEAVFEEIGVKEAVFKKLDEVMKPGAILASNTST 418
Query: 423 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 482
+D+N + T ++G HFFSPA+VM LLE+VR E+T+ V+ +M V K IKK VV
Sbjct: 419 LDVNKIASFTKRPQDVVGLHFFSPANVMKLLEVVRGEKTAKDVMATVMAVAKKIKKTAVV 478
Query: 483 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAA 542
G C GF NR Y + L+ G ++D AI FG +GPF++ DLAG + A
Sbjct: 479 SGVCDGFIGNRMIEQYGRQGGFLLDEGCTPAQVDRAIEKFGFAMGPFRMGDLAGNDIGWA 538
Query: 543 TSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVLPIIEECR 601
K PD + S DLL + GR G+ GKG Y Y G + P+ V +I E R
Sbjct: 539 IRKRRYTEKPDMKY-SKTADLLCEKGRFGQKVGKGWYDYVPGKRDAIPNAEVEQMIVEHR 597
Query: 602 RLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYR 661
+ I P ++++EIV+ ++F +VNE+ +LEEGI +ASD+D + G FP +R
Sbjct: 598 KALGIT----PRKISDEEIVQRLVFSLVNEAAHILEEGIANKASDIDVVYIFGYGFPVHR 653
Query: 662 GGIVFWADAVGANYVYTSLKKWSQL---YGNFFKPSRFLEERATKG 704
GG + +AD VG V ++K++ + F++P+ ++ +G
Sbjct: 654 GGPLKYADEVGLFNVAQAMKRFQKNPLDDAKFWEPAPLIQRLVAEG 699
>gi|241663087|ref|YP_002981447.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Ralstonia pickettii
12D]
gi|240865114|gb|ACS62775.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Ralstonia pickettii
12D]
Length = 693
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 269/699 (38%), Positives = 387/699 (55%), Gaps = 24/699 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DGVA+ITL NPPVN L G+ + +A +VKAIV+TG G FSGG DI F
Sbjct: 8 QDGVAVITLSNPPVNGLGHSTRLGIVEGMVKAGDDANVKAIVITGAGKAFSGGADIREFN 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ +L V+ +E KP+VAA+ +A+GGGLELAMGCH R+AAP Q+
Sbjct: 68 TPKATQEPTL------HAVIKAVESSSKPVVAAIHSVAMGGGLELAMGCHYRVAAPGAQI 121
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
LPE+ LG++PG TQRLPR +GL A+ M++ +I SE+ K GL D ++ + L+
Sbjct: 122 ALPEVKLGILPGAGGTQRLPRAIGLEPALNMIVSGNAIPSEKLAKSGLFDQMIEGD-LMA 180
Query: 189 VSRLWALDIAARRK-PWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDV 247
+ +AL AA K P +R D+ + L+ AR A N P C+D
Sbjct: 181 GAIDFALKAAAEGKLPKLR-----DRKVEHDNPQGFLQFARNTVAAVAKNFPAPGKCVDA 235
Query: 248 IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRK 307
++ + G+ E +F ELV SR L H FF +RA SK+P+V + R V K
Sbjct: 236 VQAAVEKRFDDGIKFERDLFIELVNTPESRALRHAFFGERAASKIPDVPE-DTPVRKVEK 294
Query: 308 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 367
VAVIG G MG GI+ + I V + E E L +G+ TI N +GKLTQ+K
Sbjct: 295 VAVIGAGTMGGGISMNFLNAGIPVTILETKQEALDRGVATIRKNYENSAKKGKLTQEKVE 354
Query: 368 NALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 427
+ +L L Y + KD D+VIEAV E + +K+ +F +L++ ILA+NTST+D++
Sbjct: 355 QRMALLTPTLSYDDIKDADLVIEAVFEEMGVKEVVFKKLDEVVKQGAILASNTSTLDVDK 414
Query: 428 VGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 487
+ T ++G HFFSPA+VM LLE+VR + T+ V+ +M + K IKK VV G C
Sbjct: 415 IASFTKRPQDVVGMHFFSPANVMKLLEVVRGKETAKDVLATVMKLAKAIKKTAVVSGVCD 474
Query: 488 GFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEF 547
GF NR YS+ A L+ G ++D AI FG +GPF++ DLAG + A K
Sbjct: 475 GFIGNRMIEQYSRQAGYLLDEGALPEQVDKAIEKFGFAMGPFRMGDLAGNDIGWAIRKRR 534
Query: 548 DKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGS-KPKPDPSVLPIIEECRRLSNI 606
PD + S DLL + GR G+ G G Y Y+ G KP P+ V +I + + I
Sbjct: 535 AVDKPDIVY-SKTADLLCEMGRFGQKTGGGWYDYKAGDRKPYPNQQVNDMIVQHSKDLGI 593
Query: 607 MPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVF 666
++++EIVE ++F +VNE ++LEEGI +ASD+D + G FP +RGG +
Sbjct: 594 T----RRKISDEEIVERLVFALVNEGAKILEEGIASKASDIDMVYLTGYGFPLFRGGPML 649
Query: 667 WADAVGANYVYTSLKKWSQLY-GNFFKPSRFLEERATKG 704
+AD VG V ++ ++S+ Y G +K + L++ A +G
Sbjct: 650 YADTVGLYNVAQAMHRYSKGYHGEAWKVAPLLQKLADEG 688
>gi|187928533|ref|YP_001899020.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Ralstonia pickettii
12J]
gi|187725423|gb|ACD26588.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Ralstonia pickettii
12J]
Length = 693
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 269/699 (38%), Positives = 387/699 (55%), Gaps = 24/699 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DGVA+ITL NPPVN L G+ + +A +VKAIV+TG G FSGG DI F
Sbjct: 8 QDGVAVITLSNPPVNGLGHSTRLGIVEGMVKAGDDANVKAIVITGAGKAFSGGADIREFN 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ +L V+ +E KP+VAA+ +A+GGGLELAMGCH R+AAP Q+
Sbjct: 68 TPKATQEPTL------HAVIKAVESSSKPVVAAIHSVAMGGGLELAMGCHFRVAAPGAQI 121
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
LPE+ LG++PG TQRLPR +GL A+ M++ +I SE+ K GL D ++ + L+
Sbjct: 122 ALPEVKLGILPGAGGTQRLPRAIGLEPALNMIVSGNAIPSEKLAKSGLFDQMIEGD-LMA 180
Query: 189 VSRLWALDIAARRK-PWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDV 247
+ +AL AA K P +R D+ + L+ AR A N P C+D
Sbjct: 181 GAIDFALKAAAEGKLPKLR-----DRKVEHDNPQGFLQFARNTVAAVAKNFPAPGKCVDA 235
Query: 248 IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRK 307
++ + G+ E +F ELV SR L H FF +RA SK+P+V + R V K
Sbjct: 236 VQAAVEKRFDDGIKFERDLFIELVNTSKSRALRHAFFGERAASKIPDVPE-DTPVRKVEK 294
Query: 308 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 367
VAVIG G MG GI+ + I V + E E L +G+ TI N +GKLTQ+K
Sbjct: 295 VAVIGAGTMGGGISMNFLNAGIPVTMLETKQEALDRGVATIRKNYENSAKKGKLTQEKVE 354
Query: 368 NALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 427
+ +L L Y + KD D+VIEAV E + +K+ +F +L++ ILA+NTST+D++
Sbjct: 355 QRMALLTPTLSYDDIKDADLVIEAVFEEMGVKEVVFKKLDEVVKQGAILASNTSTLDVDK 414
Query: 428 VGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 487
+ T ++G HFFSPA+VM LLE+VR + T+ V+ +M + K IKK VV G C
Sbjct: 415 IASFTKRPQDVVGMHFFSPANVMKLLEVVRGKDTAKDVLATVMKLAKAIKKTAVVSGVCD 474
Query: 488 GFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEF 547
GF NR YS+ A L+ G ++D AI FG +GPF++ DLAG + A K
Sbjct: 475 GFIGNRMIEQYSRQAGYLLDEGALPEQVDKAIEKFGFAMGPFRMGDLAGNDIGWAIRKRR 534
Query: 548 DKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGS-KPKPDPSVLPIIEECRRLSNI 606
PD + S DLL + GR G+ G G Y Y+ G KP P+ V +I + + I
Sbjct: 535 AVDKPDIVY-SKTADLLCEMGRFGQKTGGGWYDYKAGDRKPYPNQQVNDMIVQHSKDLGI 593
Query: 607 MPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVF 666
++++EIVE ++F +VNE ++LEEGI +ASD+D + G FP +RGG +
Sbjct: 594 T----RRKISDEEIVERLVFALVNEGAKILEEGIASKASDIDMVYLTGYGFPLFRGGPML 649
Query: 667 WADAVGANYVYTSLKKWSQLY-GNFFKPSRFLEERATKG 704
+AD VG V ++ ++S+ Y G +K + L++ A +G
Sbjct: 650 YADTVGLYNVAQAMHRYSKGYHGEAWKVAPLLQKLADEG 688
>gi|161524541|ref|YP_001579553.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia multivorans ATCC
17616]
gi|189350703|ref|YP_001946331.1| 3-hydroxybutyryl-CoA epimerase [Burkholderia multivorans ATCC
17616]
gi|160341970|gb|ABX15056.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia
multivorans ATCC 17616]
gi|189334725|dbj|BAG43795.1| 3-hydroxybutyryl-CoA epimerase [Burkholderia multivorans ATCC
17616]
Length = 694
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 258/676 (38%), Positives = 376/676 (55%), Gaps = 20/676 (2%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVN L + G+ D E A + AIVLTG G FSGG DI F
Sbjct: 9 DGVAVITLNNPPVNGLGLSTRLGIMDALERAAHDPSIAAIVLTGAGRAFSGGADITEFNT 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + ++ V+ +E KP+VAA+ + +GGGLELA+G H R+AA Q+
Sbjct: 69 PKA------LQEPTLHTVIRAVEASAKPVVAALHSVVMGGGLELALGAHYRVAARGAQIA 122
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 189
LPE+ LG++PG TQRLPR VGL A+ M++ + SE+ + GL D + + LL
Sbjct: 123 LPEVKLGLLPGAGGTQRLPRAVGLETALNMIVSGAPVPSEQLAESGLFDQLADGD-LLDA 181
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
+ +A A+ P R D+ A ++ AR K APN P + C+D IE
Sbjct: 182 AVAFARKAGAQPGPHPRV---RDRKIDHDNAAGFIQFARNSVKAAAPNFPAPRKCIDAIE 238
Query: 250 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKV 308
G++HG G + E + F L+M SR L H FF +RA SK+P+V D + R +R+V
Sbjct: 239 AGVLHGFDKGSIAEREGFVALMMTPESRALRHAFFGERAASKIPDVPADTPV--RDIRRV 296
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
AVIG G MG GIA + + V L E E L +G+ TI N V +GKLTQ+K
Sbjct: 297 AVIGAGTMGGGIAMNFVNAGLPVTLLETKQEALERGLATIRKNYDAQVKKGKLTQEKLEA 356
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
+ ++ L Y + KD D+++EAV E + +K+++F +L++ P ILA+NTST+D+N +
Sbjct: 357 RMALIAPTLSYDDLKDADLIVEAVFEELGVKEQVFRKLDEVAKPGAILASNTSTLDVNRI 416
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
T ++G HFFSPA+VM LLE+VR +T+ V+ +M V K I+K VV G C G
Sbjct: 417 AAFTKRPQDVVGMHFFSPANVMKLLEVVRGAQTAKDVLATVMAVAKKIRKTAVVSGVCDG 476
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR Y + A ++ G +ID AI FG +GPF++ DLAG + A K
Sbjct: 477 FIGNRMIEQYIRQALFMLEEGALPAQIDRAIEQFGFAMGPFRMSDLAGNDIGWAIRKRRY 536
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMP 608
PD + S + D L + GR G+ G G Y Y G + + PS L ++E +
Sbjct: 537 VEQPDLHY-SKIADRLCEQGRFGQKTGAGWYDYAPGDR-RARPSAL--VDEMVVAYSKER 592
Query: 609 GGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWA 668
G + + + EIVE ++F +VNE ++LEE I +ASD+D + G FP +RGG + +A
Sbjct: 593 GIERRKIADDEIVERLVFALVNEGAKILEEKIASKASDIDMVYLTGYGFPLWRGGPMLYA 652
Query: 669 DAVGANYVYTSLKKWS 684
D VG V ++++++
Sbjct: 653 DMVGLYNVERAIRRYA 668
>gi|416997008|ref|ZP_11939200.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding [Burkholderia sp.
TJI49]
gi|325518003|gb|EGC97818.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding [Burkholderia sp.
TJI49]
Length = 694
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 261/676 (38%), Positives = 380/676 (56%), Gaps = 20/676 (2%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVN L + G+ D + A V AIVLTG G FSGG DI F
Sbjct: 9 DGVAVITLNNPPVNGLGLSTRLGVMDALDRAAQDPSVTAIVLTGAGRAFSGGADITEFNT 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + ++ V+ +E KP+VAA+ + +GGGLELA+G H R+AAP Q+
Sbjct: 69 PKA------LQEPTLHTVIRAVEASAKPVVAALHSVVMGGGLELALGAHYRVAAPGAQVA 122
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 189
LPE+ LG++PG TQRLPR VGL A+ M++ + SE+ K GL D +V E LL
Sbjct: 123 LPEVKLGLLPGAGGTQRLPRAVGLETALNMIVSGAPVPSEQLAKSGLFDEMVDGE-LLDA 181
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
+ +A + A +P + R K+ A ++ AR AK APN P C+D IE
Sbjct: 182 AVAFARKVGA--QPGLHPRVRDRKI-VHENAAGFIQFARNSAKAAAPNFPAPHKCIDAIE 238
Query: 250 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKV 308
G+++G G + E + F L+M SR L H FF +RA SK+P+V D L R +R+V
Sbjct: 239 AGVLNGFDKGSIAEREGFVALMMTPESRALRHAFFGERAASKIPDVPADTPL--REIRRV 296
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
AVIG G MG GIA + + V L E + L +G+ TI N V +GKLTQ+K +
Sbjct: 297 AVIGAGTMGGGIAMNFVNAGLPVTLLETKQDALDRGLATIRKNYDAQVKKGKLTQEKLDA 356
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
+ ++ L Y + KD D++IEAV E + +K+++F +L++ P ILA+NTST+D++ +
Sbjct: 357 RMALIAPTLSYDDLKDADLIIEAVFEELGVKEQVFRKLDEVAKPGAILASNTSTLDVDKI 416
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
T ++G HFFSPA+VM LLE+VR +T+ V+ +M V K I+K VV G C G
Sbjct: 417 AAFTKRPQDVVGMHFFSPANVMKLLEVVRGAQTAKDVLATVMAVAKKIRKTAVVSGVCDG 476
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR Y + A ++ G ++D AI FG +GPF++ DLAG + A K
Sbjct: 477 FIGNRMIEQYIRQALFMLEEGALPAQVDRAIEKFGFAMGPFRMSDLAGNDIGWAIRKRRY 536
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMP 608
PD + S + D L + GR G+ G G Y Y G + K PS L ++E +
Sbjct: 537 VEKPDLHY-SKIADRLCEQGRFGQKTGAGWYDYVPGDR-KARPSAL--VDEMVVAYSQER 592
Query: 609 GGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWA 668
G + + + EIVE ++F +VNE ++L E I +ASD+D + G FP +RGG + +A
Sbjct: 593 GIERRRIGDDEIVERLVFALVNEGAKILAEKIASKASDIDMVYLTGYGFPLWRGGPMLYA 652
Query: 669 DAVGANYVYTSLKKWS 684
D VG V ++++++
Sbjct: 653 DMVGLYNVERAIRRYA 668
>gi|309781993|ref|ZP_07676723.1| enoyl-CoA hydratase [Ralstonia sp. 5_7_47FAA]
gi|404377685|ref|ZP_10982785.1| hypothetical protein HMPREF0989_04269 [Ralstonia sp. 5_2_56FAA]
gi|308919059|gb|EFP64726.1| enoyl-CoA hydratase [Ralstonia sp. 5_7_47FAA]
gi|348611680|gb|EGY61320.1| hypothetical protein HMPREF0989_04269 [Ralstonia sp. 5_2_56FAA]
Length = 693
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 269/699 (38%), Positives = 387/699 (55%), Gaps = 24/699 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DGVA+ITL NPPVN L G+ + +A +VKAIV+TG G FSGG DI F
Sbjct: 8 QDGVAVITLSNPPVNGLGHSTRLGIVEGMVKAGDDANVKAIVITGAGKAFSGGADIREFN 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ +L V+ +E KP+VAA+ +A+GGGLELAMGCH R+AAP Q+
Sbjct: 68 TPKATQEPTL------HAVIKAVESSSKPVVAAIHSVAMGGGLELAMGCHFRVAAPGAQI 121
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
LPE+ LG++PG TQRLPR +GL A+ M++ +I SE+ K GL D ++ + L+
Sbjct: 122 ALPEVKLGILPGAGGTQRLPRAIGLEPALNMIVSGNAIPSEKLAKSGLFDQMIEGD-LMA 180
Query: 189 VSRLWALDIAARRK-PWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDV 247
+ +AL AA K P +R D+ + L+ AR A N P C+D
Sbjct: 181 GAIDFALKAAAEGKLPKLR-----DRKVEHDNPQGFLQFARNTVAAVAKNFPAPGKCVDA 235
Query: 248 IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRK 307
++ + G+ E +F ELV SR L H FF +RA SK+P+V + R V K
Sbjct: 236 VQAAVEKRFDDGIKFERDLFIELVNTSESRALRHAFFGERAASKIPDVPE-DTPVRKVEK 294
Query: 308 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 367
VAVIG G MG GI+ + I V + E E L +G+ TI N +GKLTQ+K
Sbjct: 295 VAVIGAGTMGGGISMNFLNAGIPVTILETKQEALDRGVSTIRKNYENSAKKGKLTQEKVE 354
Query: 368 NALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 427
+ +L L Y + KD D+VIEAV E + +K+ +F +L++ ILA+NTST+D++
Sbjct: 355 QRMALLTPTLSYDDIKDADLVIEAVFEEMGVKEVVFKKLDEVVKQGAILASNTSTLDVDK 414
Query: 428 VGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 487
+ T ++G HFFSPA+VM LLE+VR + T+ V+ +M + K IKK VV G C
Sbjct: 415 IASFTKRPQDVVGMHFFSPANVMKLLEVVRGKDTAKDVLATVMKLAKAIKKTAVVSGVCD 474
Query: 488 GFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEF 547
GF NR YS+ A L+ G ++D AI FG +GPF++ DLAG + A K
Sbjct: 475 GFIGNRMIEQYSRQAGYLLDEGALPEQVDKAIEKFGFAMGPFRMGDLAGNDIGWAIRKRR 534
Query: 548 DKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGS-KPKPDPSVLPIIEECRRLSNI 606
PD + S DLL + GR G+ G G Y Y+ G KP P+ V +I + + I
Sbjct: 535 AVDKPDIVY-SKTADLLCEMGRFGQKTGGGWYDYKAGDRKPYPNQQVNDMIVQHSKDLGI 593
Query: 607 MPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVF 666
++++EIVE ++F +VNE ++LEEGI +ASD+D + G FP +RGG +
Sbjct: 594 T----RRKISDEEIVERLVFALVNEGAKILEEGIASKASDIDMVYLTGYGFPLFRGGPML 649
Query: 667 WADAVGANYVYTSLKKWSQLY-GNFFKPSRFLEERATKG 704
+AD VG V ++ ++S+ Y G +K + L++ A +G
Sbjct: 650 YADTVGLYNVAQAMHRYSKGYHGEAWKVAPLLQKLADEG 688
>gi|355388895|gb|AER62390.1| hypothetical protein [Eremopyrum bonaepartis]
Length = 332
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 215/331 (64%), Positives = 265/331 (80%)
Query: 193 WALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGI 252
WALDI RKPWI+SL++TDKL L EARE+LK AR QA+K A N+ C+DVIEEGI
Sbjct: 2 WALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLVCIDVIEEGI 61
Query: 253 VHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIG 312
V G +G+ KEA F+ L+ DT + L+HVFF+QRATSKVP TD+GL PR + KVA++G
Sbjct: 62 VSGPRAGLWKEANAFQGLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKITKVAILG 121
Query: 313 GGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKM 372
GGLMGSGIATA IL+N V+LKEVN ++L GI I+AN++ V +GK+T+++ AL +
Sbjct: 122 GGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEKALSL 181
Query: 373 LKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKT 432
L G L Y +FK+VD+VIEAVIE+V LKQ+IF++LEK CP HCILATNTSTIDLN++GEKT
Sbjct: 182 LSGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIGEKT 241
Query: 433 SSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVN 492
+SQDRIIGAHFFSPAHVMPLLEIVRT+ TSAQV++DL+ VGK IKK P+VVGNCTGFAVN
Sbjct: 242 NSQDRIIGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGFAVN 301
Query: 493 RAFFPYSQSARLLVSLGVDVFRIDSAIRSFG 523
R FFPY+QSA L V G+DV++ID A FG
Sbjct: 302 RMFFPYTQSALLFVDYGMDVYKIDRACTKFG 332
>gi|355388893|gb|AER62389.1| hypothetical protein [Australopyrum retrofractum]
Length = 333
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 214/333 (64%), Positives = 265/333 (79%)
Query: 191 RLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 250
R WALDI RKPWI+SL++TDKL L EARE+LK AR QA+K A N+ C+DVIEE
Sbjct: 1 RRWALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLVCIDVIEE 60
Query: 251 GIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAV 310
GIV G +G+ KEA F+ L+ DT + L+HVFF+QRATSKVP TD+GL PR + KVA+
Sbjct: 61 GIVSGPRAGLWKEANAFQSLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKITKVAI 120
Query: 311 IGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNAL 370
+GGGLMGSGIATA IL+N V+LKEVN ++L GI I+AN++ V +GK+T+++ AL
Sbjct: 121 LGGGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEKAL 180
Query: 371 KMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGE 430
++ G L Y +FK+VD+VIEAVIE+V LKQ+IF++LEK CP HCILATNTSTIDLN++GE
Sbjct: 181 SLVTGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIGE 240
Query: 431 KTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFA 490
KT SQDRI+GAHFFSPAHVMPLLEIVRT+ TSAQV++DL+ VGK IKK P+VVGNCTGFA
Sbjct: 241 KTKSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGFA 300
Query: 491 VNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFG 523
VNR FFPY+QSA L V G+DV++ID A FG
Sbjct: 301 VNRMFFPYTQSALLFVDYGMDVYKIDRACTKFG 333
>gi|355388921|gb|AER62403.1| hypothetical protein [Pseudoroegneria tauri subsp. libanotica]
Length = 338
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 214/338 (63%), Positives = 267/338 (78%)
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
+R WALDI RKPWI+SL++TD L L EARE+LK AR QA+K A N+ C+DVIE
Sbjct: 1 ARRWALDICELRKPWIKSLYKTDXLEPLGEAREILKFARAQARKQAANLEHPLXCIDVIE 60
Query: 250 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 309
EGIV G +G+ KEA F+ L+ DT + L+HVFF+QRATSKVP TD+GL PR + KVA
Sbjct: 61 EGIVSGPRAGLWKEANAFQXLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKIXKVA 120
Query: 310 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 369
++GGGLMGSGIATA IL+N V+LKEVN ++L GI I+AN++ V +GK+T+++ A
Sbjct: 121 ILGGGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYXKA 180
Query: 370 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 429
L + G L Y +FK+VD+VIEAVIE+V LKQ+IF++LEK CP HCILATNTSTIDLN++G
Sbjct: 181 LSLXTGXLGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIG 240
Query: 430 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 489
EKT SQDRI+GAHFFSPAHVMPLLEIV T+ TSAQV++DL+ VGK IKK P+VVGNCTGF
Sbjct: 241 EKTKSQDRIVGAHFFSPAHVMPLLEIVXTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGF 300
Query: 490 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIG 527
AVNR FFPY+QSA L V G+DV++ID A FG+P+G
Sbjct: 301 AVNRMFFPYTQSALLFVDYGMDVYKIDRACTKFGMPMG 338
>gi|259415983|ref|ZP_05739903.1| peroxisomal bifunctional enzyme [Silicibacter sp. TrichCH4B]
gi|259347422|gb|EEW59199.1| peroxisomal bifunctional enzyme [Silicibacter sp. TrichCH4B]
Length = 696
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 256/704 (36%), Positives = 391/704 (55%), Gaps = 26/704 (3%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
V MEV +D +A+I + NPPVNAL+ + +GL F E RDDVKA+V+ G F G
Sbjct: 5 VLMEVVDD-IAVIAIANPPVNALSHAVRSGLDAAFAEIARRDDVKAVVIYGTDRTFIAGA 63
Query: 66 DINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA 125
DI F K +PD+ +N IE C P+VAA+ G ALGGGLE+A+G H R+A
Sbjct: 64 DIREFGK---PPQEPFLPDL-----INRIEACAVPVVAALHGTALGGGLEVALGAHYRVA 115
Query: 126 APKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 182
P + GLPE+TLG++PG TQRLPRL G+ A+E + + I+++E K G+ID +
Sbjct: 116 VPNARFGLPEVTLGILPGAGGTQRLPRLAGVEFALEAITSGRQISADEALKTGVIDRISD 175
Query: 183 SEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQ 242
+ ++ ++ +A ++ A + RT +L A EV AR + K A Q
Sbjct: 176 TSDIREMGLTYARELVASGA----TPRRTSELSPAPVAAEVFDAARTRLAKKARGQLAPQ 231
Query: 243 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 302
C+ +E G+ E +F+EL+ D L+H FFA+R +KVP + D+ P
Sbjct: 232 NCIKAVESATHLSFAEGLANERALFQELMESDQRAALIHAFFAERQVAKVPEIKDVA--P 289
Query: 303 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 362
R + ++ VIGGG MG+GIA + +L + V L E +++ + + + +RG V RGKL+
Sbjct: 290 RAIDQIGVIGGGTMGAGIAVSALLAGLQVTLIERDADAVARAEANVSKTLRGSVKRGKLS 349
Query: 363 QDKANNALK-MLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 421
Q+K + + + DY+ + D+VIEAV ES+ +K+ +F++L+ C P +LA+NTS
Sbjct: 350 QEKYDAIMGGTFRASDDYATLAEADVVIEAVFESMEVKKDVFTKLDAICKPGAVLASNTS 409
Query: 422 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 481
+D+N + TS + +IG HFFSPAHVM LLEIV ++T+ +V + K +KKV V
Sbjct: 410 YLDVNEIAAMTSRPEDVIGLHFFSPAHVMRLLEIVVADKTAPEVTATGFALAKRLKKVAV 469
Query: 482 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAA 541
G C GF NR Y ++ V G F +D A+ +FGL +GP+ + DLAG +
Sbjct: 470 RAGVCDGFIGNRILSHYRKAGDGAVLAGASPFEVDRALVNFGLAMGPYAVSDLAGLDIGW 529
Query: 542 ATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTY-EKGSKPKPDPSVLPIIEEC 600
AT K R + D L ++G G+ GKG Y Y E+G P + VL I
Sbjct: 530 ATRKRLAPTRDPREVYAEFADRLCEAGHFGRKAGKGFYVYGEEGQVPNDE--VLEHIATE 587
Query: 601 RRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSY 660
R I ++E+EIV+ + +VNE+ RV+EEGI +R D+D + G FP +
Sbjct: 588 RAAKGIAAR----EISEQEIVDRYMAAMVNEAARVVEEGIALRPLDVDVTLLNGYGFPRW 643
Query: 661 RGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
RGG + +AD VG + + +++++Q ++P+ L+ +G
Sbjct: 644 RGGPMQYADTVGLDKILADIERFAQEDDFLWQPASLLKRLVAEG 687
>gi|172060871|ref|YP_001808523.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia ambifaria MC40-6]
gi|171993388|gb|ACB64307.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia ambifaria
MC40-6]
Length = 694
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 264/702 (37%), Positives = 387/702 (55%), Gaps = 31/702 (4%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVN L + G+ D + A V AIVLTG G FSGG DI F
Sbjct: 9 DGVAVITLNNPPVNGLGLSTRQGVMDALDRALQDASVTAIVLTGTGRAFSGGADITEFNT 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + ++ V+ +E KP+VAA+ + +GGGLELA+G H R+AAP Q+
Sbjct: 69 PKA------LQEPTLHTVIRAVEASAKPVVAALHSVVMGGGLELALGAHYRVAAPGAQVA 122
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 189
LPE+ LG++PG TQRLPR VGL A+ M++ + SE+ GL DA+ + LL
Sbjct: 123 LPEVKLGLLPGAGGTQRLPRAVGLETALNMIVSGAPVPSEQLANSGLFDAMADGD-LLDA 181
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
+ +A + A++ P R D+ A ++ AR A+ APN P C+D IE
Sbjct: 182 AVAFARKVGAQKGPHPRV---RDRKIVHENAAGFIQFARNSARAAAPNFPAPHKCIDAIE 238
Query: 250 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKV 308
G+++G G + E + F L+M SR L H FF +RA SK+P+V D + R +R+V
Sbjct: 239 AGVLNGFDKGSIAEREGFVALMMTPESRALRHAFFGERAASKIPDVPADTPV--REIRRV 296
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
VIG G MG GIA I + V L E + L +G+ TI N V +GKLTQ K +
Sbjct: 297 GVIGAGTMGGGIAMNFINAGLPVTLLETKQDALDRGLATIRKNYDAQVKKGKLTQQKLDA 356
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
+ ++ L Y + KD D+++EAV E + +K+++F +L+ P ILA+NTST+D++ +
Sbjct: 357 RMALITPTLSYDDLKDADLIVEAVFEELGVKEQVFGQLDAVAKPGAILASNTSTLDVDKI 416
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
T ++G HFFSPA+VM LLE+VR +T+ V+ +M V K I+K VV G C G
Sbjct: 417 AAFTKRPQDVVGMHFFSPANVMKLLEVVRGAQTAKDVLATVMAVAKKIRKTAVVSGVCDG 476
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR Y + A ++ G ++D AI FG +GPF++ DLAG + A K
Sbjct: 477 FIGNRMIEQYIRQALFMLEEGALPAQVDRAIEKFGFAMGPFRMSDLAGNDIGWAIRKRRY 536
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGS-KPKP----DPSVLPIIEECRRL 603
PD + S + D L + GR G+ G G Y Y G K KP D V+ +EC
Sbjct: 537 VEKPDLHY-SKMADRLCELGRFGQKTGGGWYDYVPGDRKAKPSALVDEMVVAYSKEC--- 592
Query: 604 SNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGG 663
G + + + EIVE ++F +VNE ++LEE I +ASD+D + G FP +RGG
Sbjct: 593 -----GIERRKIGDDEIVERLVFALVNEGAKILEEKIASKASDIDMVYLTGYGFPLWRGG 647
Query: 664 IVFWADAVGANYVYTSLKKWSQL-YGNFFKPSRFLEERATKG 704
+ +AD VG V ++++++ G+ ++ + + ERA G
Sbjct: 648 PMLYADMVGLYNVERAIRRYAAAPNGDAWQLAPSIVERAAAG 689
>gi|107028915|ref|YP_626010.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding [Burkholderia
cenocepacia AU 1054]
gi|116689927|ref|YP_835550.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia cenocepacia HI2424]
gi|105898079|gb|ABF81037.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
[Burkholderia cenocepacia AU 1054]
gi|116648016|gb|ABK08657.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
[Burkholderia cenocepacia HI2424]
Length = 694
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 258/676 (38%), Positives = 379/676 (56%), Gaps = 20/676 (2%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVN L + G+ D + A V AIVLTG G FSGG DI F
Sbjct: 9 DGVAVITLNNPPVNGLGLSTRQGVMDALDRAARDPSVTAIVLTGAGRAFSGGADITEFNT 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + ++ V+ +E KP+VAA+ + +GGGLELA+G H R+AAP Q+
Sbjct: 69 PKA------LQEPTLHTVIRAVEASAKPVVAALHSVVMGGGLELALGAHYRVAAPGAQVA 122
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 189
LPE+ LG++PG TQRLPR VGL A+ M++ + SE+ K GL D + + LL
Sbjct: 123 LPEVKLGLLPGAGGTQRLPRAVGLETALNMIVSGAPVPSEQLAKSGLFDEMADGD-LLDA 181
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
+ +A + A++ P R D+ A ++ AR A+ APN P C+D IE
Sbjct: 182 AVAFARKVGAQKGPHPRV---RDRKIVHENAAGFIQFARNSARAAAPNYPALHKCIDAIE 238
Query: 250 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKV 308
G+++G G + E + F L+M SR L H FF +RA SK+P+V D L R +R+V
Sbjct: 239 AGVLNGFDKGSVAEREGFVALMMTPESRALRHAFFGERAASKIPDVPADTPL--REIRRV 296
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
VIG G MG GIA I + V L E + L +G+ TI N V +GKLTQ+K +
Sbjct: 297 GVIGAGTMGGGIAMNFINAGLPVTLLETKQDALERGLATIRKNYDAQVKKGKLTQEKLDA 356
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
L ++ L Y + K+ D+++EAV E + +K+++F +L++ P ILA+NTST+D++ +
Sbjct: 357 RLALITPTLSYDDLKEADLIVEAVFEELGVKEQVFRKLDEVAKPGAILASNTSTLDVDKI 416
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
T ++G HFFSPA+VM LLE+VR +T+ V+ +M V K I+K VV G C G
Sbjct: 417 AAFTKRPQDVVGMHFFSPANVMKLLEVVRGAQTAKDVLATVMAVAKKIRKTAVVSGVCDG 476
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR Y + A ++ G ++D AI FG +GPF++ DLAG + A K
Sbjct: 477 FIGNRMIEQYIRQALFMLEEGALPAQVDRAIEKFGFAMGPFRMSDLAGNDIGWAIRKRRY 536
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMP 608
PD + S + D L + GR G+ G G Y Y G + K PS L ++E +
Sbjct: 537 VEQPDLQY-SKIADRLCEQGRFGQKTGAGWYDYVPGDR-KAKPSSL--VDEMVVAYSKER 592
Query: 609 GGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWA 668
G + + + EIVE ++F +VNE ++LEE I +ASD+D + G FP +RGG + +A
Sbjct: 593 GVERRKIGDDEIVERLVFALVNEGAKILEEKIASKASDIDMVYLTGYGFPLWRGGPMLYA 652
Query: 669 DAVGANYVYTSLKKWS 684
D VG V ++++++
Sbjct: 653 DTVGLYNVERAIRRYA 668
>gi|421476901|ref|ZP_15924758.1| enoyl-CoA hydratase/isomerase family protein [Burkholderia
multivorans CF2]
gi|400227466|gb|EJO57466.1| enoyl-CoA hydratase/isomerase family protein [Burkholderia
multivorans CF2]
Length = 694
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 258/676 (38%), Positives = 375/676 (55%), Gaps = 20/676 (2%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVN L + G+ D E A + AIVLTG G FSGG DI F
Sbjct: 9 DGVAVITLNNPPVNGLGLSTRLGIMDALERAAHDPSIAAIVLTGAGRAFSGGADITEFNT 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + ++ V+ +E KP+VAA+ + +GGGLELA+G H R+AA Q+
Sbjct: 69 PKA------LQEPTLHTVIRAVEASAKPVVAALHSVVMGGGLELALGAHYRVAARGAQIA 122
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 189
LPE+ LG++PG TQRLPR VGL A+ M++ + SE+ + GL D + + LL
Sbjct: 123 LPEVKLGLLPGAGGTQRLPRAVGLETALNMIVSGAPVPSEQLAESGLFDQLADGD-LLDA 181
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
+ +A A+ P R D+ A ++ AR K APN P C+D IE
Sbjct: 182 AVAFARKAGAQPGPHPRV---RDRKIVHDNAAGFIQFARNSVKAAAPNFPAPHKCIDAIE 238
Query: 250 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKV 308
G++HG G + E + F L+M SR L H FF +RA SK+P+V D + R +R+V
Sbjct: 239 AGVLHGFDKGSIAEREGFVALMMTPESRALRHAFFGERAASKIPDVPADTPV--RDIRRV 296
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
AVIG G MG GIA + + V L E E L +G+ TI N V +GKLTQ+K
Sbjct: 297 AVIGAGTMGGGIAMNFVNAGLPVTLLETKQEALERGLATIRKNYDAQVKKGKLTQEKLEA 356
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
+ ++ L Y + KD D+++EAV E + +K+++F +L++ P ILA+NTST+D+N +
Sbjct: 357 RMALIAPTLSYDDLKDADLIVEAVFEELGVKEQVFRKLDEVAKPGAILASNTSTLDVNRI 416
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
T ++G HFFSPA+VM LLE+VR +T+ V+ +M V K I+K VV G C G
Sbjct: 417 AAFTKRPQDVVGMHFFSPANVMKLLEVVRGAQTAKDVLATVMAVAKKIRKTAVVSGVCDG 476
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR Y + A ++ G +ID AI FG +GPF++ DLAG + A K
Sbjct: 477 FIGNRMIEQYIRQALFMLEEGALPAQIDRAIEQFGFAMGPFRMSDLAGNDIGWAIRKRRY 536
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMP 608
PD + S + D L + GR G+ G G Y Y G + + PS L ++E +
Sbjct: 537 VEQPDLHY-SKIADRLCEQGRFGQKTGAGWYDYAPGDR-RARPSAL--VDEMVVAYSKER 592
Query: 609 GGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWA 668
G + + + EIVE ++F +VNE ++LEE I +ASD+D + G FP +RGG + +A
Sbjct: 593 GIERRKIADDEIVERLVFALVNEGAKILEEKIASKASDIDMVYLTGYGFPLWRGGPMLYA 652
Query: 669 DAVGANYVYTSLKKWS 684
D VG V ++++++
Sbjct: 653 DMVGLYNVERAIRRYA 668
>gi|344170553|emb|CCA82972.1| fused 3-hydroxybutyryl-CoA
epimerase,delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase,enoyl-CoA hydratase, 3-hydroxyacyl-CoA
dehydrogenase [blood disease bacterium R229]
Length = 693
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 265/698 (37%), Positives = 379/698 (54%), Gaps = 22/698 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DGVA+ITL NPPVN L G+ + +A VKAIV+TG G FSGG DI F
Sbjct: 8 QDGVAVITLSNPPVNGLGHATRLGIVEGMVKAGDDPGVKAIVITGAGKAFSGGADIREFN 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ +L V+ +E KP+VAA+ +A+GGGLELAMGCH R+AAP Q+
Sbjct: 68 TPKATQEPTL------HAVIQAVESSGKPVVAAIHSVAMGGGLELAMGCHYRVAAPGAQI 121
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
LPE+ LG++PG TQRLPR +GL A+ M++ +I SE+ K GL D ++ + +
Sbjct: 122 ALPEVKLGILPGAGGTQRLPRAIGLEPALNMIVSGTAIPSEKLAKSGLFDQMIEGDLMAG 181
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 248
A + P +R D+ L+ AR A N P C+D +
Sbjct: 182 AIAFAQKAAADGKLPKLR-----DRKVEHDNPEGFLQFARNTVAAVAKNFPAPGKCIDAV 236
Query: 249 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 308
+ + G+ E +F ELV SR L H FF +RA SK+P+V + R V V
Sbjct: 237 QAAVEKRFDDGIQFERALFIELVNTTESRALRHAFFGERAASKIPDVPE-DTPVRKVETV 295
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
AVIG G MG GI+ + I V L E E L +GI TI N +GKLTQ+K
Sbjct: 296 AVIGAGTMGGGISMNFLNAGIPVTLLETRQEALDRGIATIRKNYENSAKKGKLTQEKVEE 355
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
+ +LK L Y + KD D+VIEAV E + +K+ +F L++ P ILA+NTST+D++ +
Sbjct: 356 FMALLKPTLSYDDIKDADLVIEAVFEDMGVKETVFKTLDEVVKPGAILASNTSTLDVDRI 415
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
T ++G HFFSPA+VM LLE+VR + T+ V+ +M + K IKK VV G C G
Sbjct: 416 AGFTRRPQDVVGMHFFSPANVMKLLEVVRGKATAKDVLATVMKIAKAIKKTAVVSGVCDG 475
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR YS+ A L+ G ++D A+ FG +GPF++ DLAG + A K
Sbjct: 476 FIGNRMIEQYSRQAGYLLDEGALPEQVDRAVEKFGFAMGPFRMGDLAGNDIGWAIRKRRA 535
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGS-KPKPDPSVLPIIEECRRLSNIM 607
PD + S DLL + GR G+ G G Y Y+ G KP P V +I + + I
Sbjct: 536 VDKPDIIY-SKTADLLCEKGRFGQKTGAGWYDYKAGDRKPYPSQEVNDMIVQHSKALGIT 594
Query: 608 PGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFW 667
++++EIVE +++ +VNE ++L+EGI +ASD+D + G FP +RGG + +
Sbjct: 595 ----RRKISDEEIVERLVYALVNEGAKILDEGIASKASDIDMVYLTGYGFPLFRGGPMLY 650
Query: 668 ADAVGANYVYTSLKKWSQLY-GNFFKPSRFLEERATKG 704
AD VG V ++ ++S+ Y G +KP+ L++ A +G
Sbjct: 651 ADTVGLYNVVQAMHRYSKGYQGEAWKPAPLLQKLAGEG 688
>gi|418293237|ref|ZP_12905154.1| enoyl-CoA hydratase [Pseudomonas stutzeri ATCC 14405 = CCUG 16156]
gi|379064637|gb|EHY77380.1| enoyl-CoA hydratase [Pseudomonas stutzeri ATCC 14405 = CCUG 16156]
Length = 701
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 254/704 (36%), Positives = 397/704 (56%), Gaps = 22/704 (3%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
V +EV + +A+IT+ NPPVNAL + GL + F+ A + V+A+ L G F G
Sbjct: 5 VRLEVQGE-IALITVNNPPVNALGQVVREGLLNAFQRAEADQQVRAVALVCEGNTFIAGA 63
Query: 66 DINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA 125
DI F K A S+ V+ +IE C KP VA + G ALGGGLE+A+GCH RIA
Sbjct: 64 DIKEFGKPPQA--------PSLPEVIEVIEGCNKPSVAVIHGTALGGGLEVALGCHYRIA 115
Query: 126 APKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 182
++GLPE+ LG++PG TQRLPRL G+ KA++M++ I + E + ++D +
Sbjct: 116 RKDAKVGLPEVKLGLLPGAGGTQRLPRLAGVEKALDMIVSGTPIGAAEAVEHHIVDELFE 175
Query: 183 SEELLKVSRLWALDIAARRKPWIRSLHRTDKL-GSLSEAREVLKLARLQAKKTAPNMPQH 241
+ L + +A + + R+ +T + G+ +EA +++ + K P +
Sbjct: 176 GD-LREAGLAYARRMVGEGRAPRRTGEQTRGIEGADNEA--LIRAKHAEVAKRMPGLFSP 232
Query: 242 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 301
C+ +E G+ +E ++F E + LVH FFA+R K+ +++ +K
Sbjct: 233 LRCIAAVEAATKLPLAEGLKRERELFAECLNSPQRGALVHSFFAERQAGKINDLS-AAVK 291
Query: 302 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 361
PR + AVIGGG MG GIA + + V L E+N + L +G++ V RG L
Sbjct: 292 PRSINTAAVIGGGTMGVGIALSFANAGVPVKLLEINEQALQRGLQRTRETYAASVKRGSL 351
Query: 362 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 421
T+D L ++ GV DY+ D D+V+EAV E + +KQ++F +L+ C P ILA+NTS
Sbjct: 352 TEDAMEQRLALITGVTDYAVLADADVVVEAVFEEMGVKQQVFEQLDAVCKPGAILASNTS 411
Query: 422 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 481
++DLN + T + ++G HFFSPA+VM LLE+VR E+TS +V+ M +GK +KKV V
Sbjct: 412 SLDLNAIAAFTKRPEDVVGLHFFSPANVMRLLEVVRGEKTSDEVLATAMAIGKQLKKVSV 471
Query: 482 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAA 541
VVG C GF NR F Y + A L+ G ++D+A+R+FG+ +GPF + DL+G +
Sbjct: 472 VVGVCDGFVGNRMVFQYGREAEFLLEEGATPQQVDAALRNFGMAMGPFAMRDLSGLDIGQ 531
Query: 542 ATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEEC 600
A K P + D L +G G+ G G Y YE G++ + +P + P++E
Sbjct: 532 AIRKRQRATLPAHLDFPTVSDNLCAAGMLGQKTGAGYYRYEPGNRTAQENPDLAPMLEAA 591
Query: 601 RRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSY 660
+ I + ++ E+ IVE +F +VNE ++LEEGI R+SD+D + G FP++
Sbjct: 592 SQEKGI----ERQTLDEQYIVERCIFALVNEGAKILEEGIAQRSSDIDVIYLNGYGFPAF 647
Query: 661 RGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
RGG +F+AD+VG ++V +K+ G+++KP+ LE+ A +G
Sbjct: 648 RGGPMFYADSVGLDWVLARVKELHARCGDWWKPAPLLEKLAAEG 691
>gi|221215077|ref|ZP_03588044.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia multivorans
CGD1]
gi|221165013|gb|EED97492.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia multivorans
CGD1]
Length = 694
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 258/676 (38%), Positives = 375/676 (55%), Gaps = 20/676 (2%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVN L + G+ D E A + AIVLTG G FSGG DI F
Sbjct: 9 DGVAVITLNNPPVNGLGLSTRLGIMDALERAAHDPSIAAIVLTGAGRAFSGGADITEFNT 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + ++ V+ +E KP+VAA+ + +GGGLELA+G H R+AA Q+
Sbjct: 69 PKA------LQEPTLHTVIRSVEASAKPVVAALHSVVMGGGLELALGAHYRVAARGAQIA 122
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 189
LPE+ LG++PG TQRLPR VGL A+ M++ + SE+ + GL D + + LL
Sbjct: 123 LPEVKLGLLPGAGGTQRLPRAVGLETALNMIVSGAPVPSEQLAESGLFDQLADGD-LLDA 181
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
+ +A A+ P R D+ A ++ AR K APN P C+D IE
Sbjct: 182 AVAFARKAGAQPGPHPRV---RDRKIVHDNAAGFIQFARNSVKAAAPNFPAPHKCIDAIE 238
Query: 250 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKV 308
G++HG G + E + F L+M SR L H FF +RA SK+P+V D + R +R+V
Sbjct: 239 AGVLHGFDKGSIAEREGFVALMMTPESRALRHAFFGERAASKIPDVPADTPV--RDIRRV 296
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
AVIG G MG GIA + + V L E E L +G+ TI N V +GKLTQ+K
Sbjct: 297 AVIGAGTMGGGIAMNFVNAGLPVTLLETKQEALERGLATIRKNYDAQVKKGKLTQEKLEA 356
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
+ ++ L Y + KD D+++EAV E + +K+++F +L++ P ILA+NTST+D+N +
Sbjct: 357 RMALIAPTLSYDDLKDADLIVEAVFEELGVKEQVFRKLDEVAKPGAILASNTSTLDVNRI 416
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
T ++G HFFSPA+VM LLE+VR +T+ V+ +M V K I+K VV G C G
Sbjct: 417 AAFTKRPQDVVGMHFFSPANVMKLLEVVRGAQTAKDVLATVMAVAKKIRKTAVVSGVCDG 476
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR Y + A ++ G +ID AI FG +GPF++ DLAG + A K
Sbjct: 477 FIGNRMIEQYIRQALFMLEEGALPAQIDRAIEQFGFAMGPFRMSDLAGNDIGWAIRKRRY 536
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMP 608
PD + S + D L + GR G+ G G Y Y G + + PS L ++E +
Sbjct: 537 VEQPDLHY-SKIADRLCEQGRFGQKTGAGWYDYAPGDR-RARPSAL--VDEMVVAYSKER 592
Query: 609 GGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWA 668
G + + + EIVE ++F +VNE ++LEE I +ASD+D + G FP +RGG + +A
Sbjct: 593 GIERRKIADDEIVERLVFALVNEGAKILEEKIASKASDIDMVYLTGYGFPLWRGGPMLYA 652
Query: 669 DAVGANYVYTSLKKWS 684
D VG V ++++++
Sbjct: 653 DMVGLYNVERAIRRYA 668
>gi|115351945|ref|YP_773784.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia ambifaria AMMD]
gi|115281933|gb|ABI87450.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
[Burkholderia ambifaria AMMD]
Length = 694
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 262/697 (37%), Positives = 387/697 (55%), Gaps = 21/697 (3%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVN L + G+ D + A V AIVLTG G FSGG DI F
Sbjct: 9 DGVAVITLNNPPVNGLGLSTRQGVMDALDRALQDPSVTAIVLTGAGRAFSGGADITEFNT 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + ++ V+ +E KP+VAA+ + +GGGLELA+G H R+AAP Q+
Sbjct: 69 PKA------LQEPTLHTVIRAVEASAKPVVAALHSVVMGGGLELALGAHYRVAAPGAQVA 122
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 189
LPE+ LG++PG TQRLPR VGL A+ M++ + SE+ GL DA+ + LL
Sbjct: 123 LPEVKLGLLPGAGGTQRLPRAVGLETALNMIVSGAPVPSEQLANSGLFDAMADGD-LLDA 181
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
+ +A + A++ P R D+ A ++ AR A+ APN P C+D IE
Sbjct: 182 AVAFARKVGAQKGPHPRV---RDRKIVHENAAGFIQFARNSARAAAPNFPAPHKCIDAIE 238
Query: 250 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKV 308
G+++G G + E + F L+M SR L H FF +RA SK+P+V D + R +R+V
Sbjct: 239 AGVLNGFDKGSVAEREGFVALMMTPESRALRHAFFGERAASKIPDVPADTPV--REIRRV 296
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
VIG G MG GIA I + V L E + L +G+ TI N V +GKLTQ K +
Sbjct: 297 GVIGAGTMGGGIAMNFINAGLPVTLLETKQDALERGLATIRKNYDAQVKKGKLTQQKLDA 356
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
+ ++ L Y + KD D+++EAV E + +K+++F +L+ P ILA+NTST+D++ +
Sbjct: 357 RMALITPTLSYDDLKDADLIVEAVFEELGVKEQVFGQLDAVAKPGAILASNTSTLDVDKI 416
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
T ++G HFFSPA+VM LLE+VR +T+ V+ +M V K I+K VV G C G
Sbjct: 417 AAFTKRPQDVVGMHFFSPANVMKLLEVVRGAQTAKDVLATVMAVAKKIRKTAVVSGVCDG 476
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR Y + A ++ G ++D AI FG +GPF++ DLAG + A K
Sbjct: 477 FIGNRMIEQYIRQALFMLEEGALPAQVDRAIEKFGFAMGPFRMSDLAGNDIGWAIRKRRY 536
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMP 608
PD + S + D L + GR G+ G G Y Y G + K PS L ++E +
Sbjct: 537 VEKPDLQY-SKIADRLCELGRFGQKTGGGWYDYVPGDR-KAKPSAL--VDEMVVAYSKER 592
Query: 609 GGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWA 668
G + + + EIVE ++F +VNE ++LEE I +ASD+D + G FP +RGG + +A
Sbjct: 593 GVERRKIGDDEIVERLVFALVNEGAKILEEKIASKASDIDMVYLTGYGFPLWRGGPMLYA 652
Query: 669 DAVGANYVYTSLKKWSQL-YGNFFKPSRFLEERATKG 704
D VG V ++++++ G+ ++ + + ERA G
Sbjct: 653 DMVGLYNVERAIRRYAAAPNGDAWQLAPSIVERAAAG 689
>gi|221198195|ref|ZP_03571241.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia multivorans
CGD2M]
gi|221208312|ref|ZP_03581315.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia multivorans
CGD2]
gi|221171725|gb|EEE04169.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia multivorans
CGD2]
gi|221182127|gb|EEE14528.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia multivorans
CGD2M]
Length = 694
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 257/677 (37%), Positives = 375/677 (55%), Gaps = 20/677 (2%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVN L + G+ D E A + AIVLTG G FSGG DI F
Sbjct: 9 DGVAVITLNNPPVNGLGLSTRLGIMDALERAVHDPSIAAIVLTGAGRAFSGGADITEFNT 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + ++ V+ +E KP+VAA+ + +GGGLELA+G H R+AA Q+
Sbjct: 69 PKA------LQEPTLHTVIRAVEASAKPVVAALHSVVMGGGLELALGAHYRVAARGAQIA 122
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 189
LPE+ LG++PG TQRLPR VGL A+ M++ + SE+ + GL D + + LL
Sbjct: 123 LPEVKLGLLPGAGGTQRLPRAVGLETALNMIVSGAPVPSEQLAESGLFDQLADGD-LLDA 181
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
+ +A A+ P R D+ A ++ AR K APN P C+D IE
Sbjct: 182 AVAFARKAGAQPGPHPRV---RDRKIVHDNAAGFIQFARNSVKAAAPNFPAPHKCIDAIE 238
Query: 250 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKV 308
G++HG G + E + F L+M SR L H FF +RA SK+P+V D + R +R+V
Sbjct: 239 AGVLHGFDKGSIAEREGFVALMMTPESRALRHAFFGERAASKIPDVPADTPV--RDIRRV 296
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
AVIG G MG GIA + + V L E + L +G+ TI N V +GKLTQ+K
Sbjct: 297 AVIGAGTMGGGIAMNFVNAGLPVTLLETKQDALERGLATIRKNYDAQVKKGKLTQEKLEA 356
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
+ ++ L Y + KD D+++EAV E + +K+++F +L++ P ILA+NTST+D+N +
Sbjct: 357 RMALIAPTLSYDDVKDADLIVEAVFEELGVKEQVFRKLDEVAKPGAILASNTSTLDVNRI 416
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
T ++G HFFSPA+VM LLE+VR +T+ V+ +M V K I+K VV G C G
Sbjct: 417 AAFTKRPQDVVGMHFFSPANVMKLLEVVRGAQTAKDVLATVMAVAKKIRKTAVVSGVCDG 476
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR Y + A ++ G +ID AI FG +GPF++ DLAG + A K
Sbjct: 477 FIGNRMIEQYIRQALFMLEEGALPAQIDRAIEQFGFAMGPFRMSDLAGNDIGWAIRKRRY 536
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMP 608
PD + S + D L + GR G+ G G Y Y G + K PS L +++ +
Sbjct: 537 VEQPDLHY-SKIADRLCEQGRFGQKTGAGWYDYAPGER-KAKPSKL--VDDMIVAFSAEQ 592
Query: 609 GGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWA 668
G + + EIVE +++ +VNE ++LEE I +ASD+D + G FP +RGG + +A
Sbjct: 593 GAARRQIGDDEIVERLVYALVNEGAKILEEKIASKASDIDMVYLTGYGFPLWRGGPMLYA 652
Query: 669 DAVGANYVYTSLKKWSQ 685
D VG V ++++++Q
Sbjct: 653 DTVGLYNVERAIRRYAQ 669
>gi|206560342|ref|YP_002231106.1| putative fatty acid degradation protein [Burkholderia cenocepacia
J2315]
gi|198036383|emb|CAR52279.1| putative fatty acid degradation protein [Burkholderia cenocepacia
J2315]
Length = 700
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 257/676 (38%), Positives = 378/676 (55%), Gaps = 20/676 (2%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVN L + G+ D + A V AIVLTG G FSGG DI F
Sbjct: 15 DGVAVITLNNPPVNGLGLSTRQGVMDALDRAAQDPSVTAIVLTGAGRAFSGGADITEFNT 74
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + ++ V+ +E KP+VAA+ + +GGGLELA+G H R+AAP Q+
Sbjct: 75 PKA------LQEPTLHTVIRAVEASAKPVVAALHSVVMGGGLELALGAHYRVAAPGAQVA 128
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 189
LPE+ LG++PG TQRLPR VGL A+ M++ + SE+ K GL D + + LL
Sbjct: 129 LPEVKLGLLPGAGGTQRLPRAVGLETALNMIVSGAPVPSEQLAKSGLFDEMADGD-LLDA 187
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
+ +A + A++ P R D+ A ++ AR A+ APN P C+D IE
Sbjct: 188 AVAFARKVGAQKGPHPRV---RDRKIVHDNAAGFIQFARNSARAAAPNYPAPHKCIDAIE 244
Query: 250 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKV 308
G+++G G + E + F L+M SR L H FF +RA SK+P+V D L R +R+V
Sbjct: 245 AGVLNGFDKGSVAEREGFVALMMTPESRALRHAFFGERAASKIPDVPADTPL--REIRRV 302
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
VIG G MG GIA I + V L E + L +G+ TI N V +GKLTQ+K +
Sbjct: 303 GVIGAGTMGGGIAMNFINAGLPVTLLETKQDALERGLATIRKNYDAQVKKGKLTQEKLDA 362
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
+ ++ L Y + KD D+++EAV E + +K+++F +L++ P ILA+NTST+D++ +
Sbjct: 363 RMALITPTLSYDDLKDADLIVEAVFEELGVKEQVFKKLDEVAKPGAILASNTSTLDVDKI 422
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
T ++G HFFSPA+VM LLE+VR +T+ V+ +M V K I+K VV G C G
Sbjct: 423 AAFTKRPQDVVGMHFFSPANVMKLLEVVRGAQTAKDVLATVMAVAKKIRKTAVVSGVCDG 482
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR Y + A ++ G ++D AI FG +GPF++ DLAG + A K
Sbjct: 483 FIGNRMIEQYIRQALFMLEEGALPAQVDRAIEKFGFAMGPFRMSDLAGNDIGWAIRKRRY 542
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMP 608
P + S + D L + GR G+ G G Y Y G + K PS L ++E +
Sbjct: 543 VEQPGLQY-SKIADRLCEQGRFGQKTGAGWYDYVPGDR-KAKPSSL--VDEMVVAYSKER 598
Query: 609 GGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWA 668
G + + + EIVE ++F +VNE ++LEE I +ASD+D + G FP +RGG + +A
Sbjct: 599 GVERRKIGDDEIVERLVFALVNEGAKILEEKIASKASDIDMVYLTGYGFPLWRGGPMLYA 658
Query: 669 DAVGANYVYTSLKKWS 684
D VG V ++++++
Sbjct: 659 DTVGLYNVERAIRRYA 674
>gi|421866883|ref|ZP_16298545.1| Enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase / 3-hydroxybutyryl-CoA epimerase [Burkholderia
cenocepacia H111]
gi|444358524|ref|ZP_21159920.1| enoyl-CoA hydratase/isomerase family protein [Burkholderia
cenocepacia BC7]
gi|358073047|emb|CCE49423.1| Enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase / 3-hydroxybutyryl-CoA epimerase [Burkholderia
cenocepacia H111]
gi|443603879|gb|ELT71857.1| enoyl-CoA hydratase/isomerase family protein [Burkholderia
cenocepacia BC7]
Length = 694
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 257/676 (38%), Positives = 378/676 (55%), Gaps = 20/676 (2%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVN L + G+ D + A V AIVLTG G FSGG DI F
Sbjct: 9 DGVAVITLNNPPVNGLGLSTRQGVMDALDRAAQDPSVTAIVLTGAGRAFSGGADITEFNT 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + ++ V+ +E KP+VAA+ + +GGGLELA+G H R+AAP Q+
Sbjct: 69 PKA------LQEPTLHTVIRAVEASAKPVVAALHSVVMGGGLELALGAHYRVAAPGAQVA 122
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 189
LPE+ LG++PG TQRLPR VGL A+ M++ + SE+ K GL D + + LL
Sbjct: 123 LPEVKLGLLPGAGGTQRLPRAVGLETALNMIVSGAPVPSEQLAKSGLFDEMADGD-LLDA 181
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
+ +A + A++ P R D+ A ++ AR A+ APN P C+D IE
Sbjct: 182 AVAFARKVGAQKGPHPRV---RDRKIVHDNAAGFIQFARNSARAAAPNYPAPHKCIDAIE 238
Query: 250 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKV 308
G+++G G + E + F L+M SR L H FF +RA SK+P+V D L R +R+V
Sbjct: 239 AGVLNGFDKGSVAEREGFVALMMTPESRALRHAFFGERAASKIPDVPADTPL--REIRRV 296
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
VIG G MG GIA I + V L E + L +G+ TI N V +GKLTQ+K +
Sbjct: 297 GVIGAGTMGGGIAMNFINAGLPVTLLETKQDALERGLATIRKNYDAQVKKGKLTQEKLDA 356
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
+ ++ L Y + KD D+++EAV E + +K+++F +L++ P ILA+NTST+D++ +
Sbjct: 357 RMALITPTLSYDDLKDADLIVEAVFEELGVKEQVFKKLDEVAKPGAILASNTSTLDVDKI 416
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
T ++G HFFSPA+VM LLE+VR +T+ V+ +M V K I+K VV G C G
Sbjct: 417 AAFTKRPQDVVGMHFFSPANVMKLLEVVRGAQTAKDVLATVMAVAKKIRKTAVVSGVCDG 476
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR Y + A ++ G ++D AI FG +GPF++ DLAG + A K
Sbjct: 477 FIGNRMIEQYIRQALFMLEEGALPAQVDRAIEKFGFAMGPFRMSDLAGNDIGWAIRKRRY 536
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMP 608
P + S + D L + GR G+ G G Y Y G + K PS L ++E +
Sbjct: 537 VEQPGLQY-SKIADRLCEQGRFGQKTGAGWYDYVPGDR-KAKPSSL--VDEMVVAYSKER 592
Query: 609 GGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWA 668
G + + + EIVE ++F +VNE ++LEE I +ASD+D + G FP +RGG + +A
Sbjct: 593 GVERRKIGDDEIVERLVFALVNEGAKILEEKIASKASDIDMVYLTGYGFPLWRGGPMLYA 652
Query: 669 DAVGANYVYTSLKKWS 684
D VG V ++++++
Sbjct: 653 DTVGLYNVERAIRRYA 668
>gi|344174706|emb|CCA86516.1| fused 3-hydroxybutyryl-CoA
epimerase,delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase, enoyl-CoA hydratase, 3-hydroxyacyl-CoA
dehydrogenase [Ralstonia syzygii R24]
Length = 693
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 264/698 (37%), Positives = 378/698 (54%), Gaps = 22/698 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DGVA+ITL NPPVN L G+ + +A VKAIV+TG G FSGG DI F
Sbjct: 8 QDGVAVITLSNPPVNGLGHATRLGIVEGMVKAGDDPGVKAIVITGAGKAFSGGADIREFN 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ +L V+ +E KP+VAA+ +A+GGGLELAMGCH R+AAP Q+
Sbjct: 68 TPKATQEPTL------HAVIQAVESSGKPVVAAIHSVAMGGGLELAMGCHYRVAAPDAQI 121
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
LPE+ LG++PG TQRLPR +GL A+ M++ +I SE+ K GL D ++ + +
Sbjct: 122 ALPEVKLGILPGAGGTQRLPRAIGLEPALNMIVSGTAIPSEKLAKSGLFDQMIDGDLMAG 181
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 248
A + P +R D+ L+ AR A N P C+D +
Sbjct: 182 AIAFAQKAAADGKLPKLR-----DRKVEHDNPEGFLQFARNTVAAVAKNFPAPGKCVDAV 236
Query: 249 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 308
+ + G+ E +F ELV SR L H FF +RA SK+P+V + R V V
Sbjct: 237 QAAVEKRFDDGIRFERALFIELVNTTESRALRHAFFGERAASKIPDVPE-DTPVRKVETV 295
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
VIG G MG GI+ + I V L E E L +GI TI N +GKLTQ+
Sbjct: 296 VVIGAGTMGGGISMNFLNAGIPVTLLETRQEALDRGIATIRKNYENSAKKGKLTQETVEE 355
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
+ +LK L Y + KD D+VIEAV E + +K+ +F +L++ P ILA+NTST+D++ +
Sbjct: 356 RMALLKPTLSYDDIKDADLVIEAVFEDMGVKETVFKQLDEVVKPGAILASNTSTLDVDRI 415
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
T ++G HFFSPA+VM LLE+VR + T+ V+ +M + K IKK VV G C G
Sbjct: 416 AGFTRRPQDVVGMHFFSPANVMKLLEVVRGKATAKDVLATVMKIAKAIKKTAVVSGVCDG 475
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR YS+ A L+ G ++D AI FG +GPF++ DLAG + A K
Sbjct: 476 FIGNRMIEQYSRQAGYLLDEGALPEQVDRAIEKFGFAMGPFRMGDLAGNDIGWAIRKRRA 535
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGS-KPKPDPSVLPIIEECRRLSNIM 607
PD + S DLL + GR G+ G G Y Y+ G KP P V +I + + I
Sbjct: 536 VDKPDIVY-SKTADLLCEKGRFGQKTGAGWYDYKAGDRKPYPSQEVNDMIVQHSKALGIT 594
Query: 608 PGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFW 667
++++EIVE +++ +VNE ++L+EGI +ASD+D + G FP +RGG + +
Sbjct: 595 ----RRKISDEEIVERLVYALVNEGAKILDEGIASKASDIDMVYLTGYGFPLFRGGPMLY 650
Query: 668 ADAVGANYVYTSLKKWSQLY-GNFFKPSRFLEERATKG 704
AD VG V ++ ++S+ Y G +KP+ L++ A +G
Sbjct: 651 ADTVGLYNVVQAMHRYSKGYQGEAWKPAPLLQKLAGEG 688
>gi|300691451|ref|YP_003752446.1| fused 3-hydroxybutyryl-CoA epimerase,
delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase,
enoyl-CoA hydratase, 3-hydroxyacyl-CoA dehydrogenase
[Ralstonia solanacearum PSI07]
gi|299078511|emb|CBJ51166.1| fused 3-hydroxybutyryl-CoA epimerase,
delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase,
enoyl-CoA hydratase, 3-hydroxyacyl-CoA dehydrogenase
[Ralstonia solanacearum PSI07]
Length = 693
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 265/698 (37%), Positives = 379/698 (54%), Gaps = 22/698 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DGVA+ITL NPPVN L G+ + +A VKAIV+TG G FSGG DI F
Sbjct: 8 QDGVAVITLSNPPVNGLGHATRLGIVEGMVKAGDDPGVKAIVITGAGKAFSGGADIREFN 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ +L V+ +E KP+VAA+ +A+GGGLELAMGCH R+AAP Q+
Sbjct: 68 TPKATQEPTL------HAVIQAVESSGKPVVAAIHSVAMGGGLELAMGCHYRVAAPGAQI 121
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
LPE+ LG++PG TQRLPR +GL A+ M++ +I SE+ K GL D ++ + +
Sbjct: 122 ALPEVKLGILPGAGGTQRLPRAIGLEPALNMIVSGTAIPSEKLAKSGLFDQMIEGDLMAG 181
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 248
A + P +R D+ L+ AR A N P C+D +
Sbjct: 182 AIAFAQKAAADGKLPKLR-----DRKVEHDNPEGFLQFARNTVAAVAKNFPAPGKCIDAV 236
Query: 249 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 308
+ + G+ E +F ELV SR L H FF +RA SK+P+V + R V V
Sbjct: 237 QAAVEKRFDDGIQFERVLFIELVNTTESRALRHAFFGERAASKIPDVPE-DTPVRKVETV 295
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
AVIG G MG GI+ + I V L E E L +GI TI N +GKLTQ+K
Sbjct: 296 AVIGAGTMGGGISMNFLNAGIPVTLLETRQEALDRGIATIRKNYENSAKKGKLTQEKVEE 355
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
+ +LK L Y + KD D+VIEAV E + +K+ +F L++ P ILA+NTST+D++ +
Sbjct: 356 FMALLKPTLSYDDIKDADLVIEAVFEDMGVKETVFKTLDEVVKPGAILASNTSTLDVDRI 415
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
T ++G HFFSPA+VM LLE+VR + T+ V+ +M + K IKK VV G C G
Sbjct: 416 AGFTRRPQDVVGMHFFSPANVMKLLEVVRGKATAKDVLATVMKIAKAIKKTAVVSGVCDG 475
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR YS+ A L+ G ++D A+ FG +GPF++ DLAG + A K
Sbjct: 476 FIGNRMIEQYSRQAGYLLDEGALPEQVDRAVEKFGFAMGPFRMGDLAGNDIGWAIRKRRA 535
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGS-KPKPDPSVLPIIEECRRLSNIM 607
PD + S DLL + GR G+ G G Y Y+ G KP P V +I + + I
Sbjct: 536 VDKPDIIY-SKTADLLCEKGRFGQKTGAGWYDYKAGDRKPYPSQEVNDMIVQHSKALGIT 594
Query: 608 PGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFW 667
++++EIVE +++ +VNE ++L+EGI +ASD+D + G FP +RGG + +
Sbjct: 595 ----RRKISDEEIVERLVYALVNEGAKILDEGIASKASDIDMVYLTGYGFPLFRGGPMLY 650
Query: 668 ADAVGANYVYTSLKKWSQLY-GNFFKPSRFLEERATKG 704
AD VG V ++ ++S+ Y G +KP+ L++ A +G
Sbjct: 651 ADTVGLYNVVQAMHRYSKGYQGEAWKPAPLLQKLAGEG 688
>gi|339328360|ref|YP_004688052.1| fatty acid oxidation complex subunit alpha [Cupriavidus necator
N-1]
gi|338170961|gb|AEI82014.1| fatty acid oxidation complex subunit alpha [Cupriavidus necator
N-1]
Length = 702
Score = 434 bits (1115), Expect = e-118, Method: Compositional matrix adjust.
Identities = 255/693 (36%), Positives = 384/693 (55%), Gaps = 23/693 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DGVA+I + NPPVNALA + G+ + A + ++AIVL G G F G DI F
Sbjct: 12 EDGVALIAVNNPPVNALAAGVREGIMEGIARANADAGIEAIVLLGEGKNFIAGADIRRFG 71
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
S P VS IE +KP+VAA+ G ALGGGLE A+ CH RIA+P +L
Sbjct: 72 --------SARP-VSTRTSAAAIEASEKPVVAAMHGYALGGGLEHALACHYRIASPDARL 122
Query: 132 GLPELTLGVIP---GTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
GLPE+ LG+IP GTQRL R+ G + A++++L + +++ E +LG++DA+V +L
Sbjct: 123 GLPEVNLGIIPAGGGTQRLTRIAGPTAALDVILSGRHVSAGEAQRLGIVDAIVEGIDLKA 182
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 248
+ +A D+A++R P R+ ++ + A L AR K + ++ L+ +
Sbjct: 183 AAIRFAKDVASQR-PLPRARDMVQRVAT-DAAMASLDAARKSIAKKSRHVKAPAYALECV 240
Query: 249 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 308
+ + GV EA+ F EL D ++ L + FFA+R +KVP K + +
Sbjct: 241 QAALTMPFDEGVALEAERFVELESSDEAKALRYAFFAEREAAKVPGAAPAA-KTQRIGSA 299
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
AVIG G MGSGIA ++ I V + EV+ E L +G++ I+ V RG L+Q +
Sbjct: 300 AVIGAGTMGSGIAMSYADAGIPVKVLEVSREALDRGMQRIQDTYAVRVKRGSLSQGDMDA 359
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
+ +++GV Y D D V+EAV E + +KQ+IF L+ P +L TN+S ID++I+
Sbjct: 360 RMALIEGVQSYEAIADCDAVVEAVFERIDIKQEIFGRLDTVMKPGALLLTNSSAIDIDIM 419
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
+ T+ + GAHFF+PA+VM L E+VR +TS + + + M + + + KV V G+C G
Sbjct: 420 ADATARPQDVAGAHFFAPANVMKLCEVVRGSKTSPETVANAMKMARDMGKVCAVAGSCDG 479
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
FA NR+ P L++ G +ID + FG P+GPF + D++G V+ K
Sbjct: 480 FATNRSRAPMMTETMLMLEEGATPEQIDKVMVDFGYPMGPFAVNDISGLDVSYEGRKRRA 539
Query: 549 KAFPD-RSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNI 606
+A P+ R P D L++ GR G+ G G Y Y +G + P PD V +I E I
Sbjct: 540 EANPEYRKLHVP--DRLVEMGRKGQKTGAGWYAYREGDRTPYPDDVVKQVIAEVAEEFGI 597
Query: 607 MPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVF 666
+ T++EI+ +LF VNE+C++LEEG RASD+D + G FP +RGG++F
Sbjct: 598 ----PQRTFTDQEILHRLLFASVNEACKILEEGKAYRASDIDVMWLYGFGFPRHRGGLMF 653
Query: 667 WADAVGANYVYTSLKKWSQLYGNFFKPSRFLEE 699
WAD VGA V + +W + YG + PS+ L E
Sbjct: 654 WADTVGAQAVLQQVSEWHERYGKRWAPSKLLAE 686
>gi|358451689|ref|ZP_09162122.1| peroxisomal bifunctional enzyme [Marinobacter manganoxydans MnI7-9]
gi|357224158|gb|EHJ02690.1| peroxisomal bifunctional enzyme [Marinobacter manganoxydans MnI7-9]
Length = 697
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 256/698 (36%), Positives = 386/698 (55%), Gaps = 27/698 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+ +IT+ PPVNAL + +GL E+ + KA++L G F G DI F K
Sbjct: 13 IGVITVNYPPVNALGQAVRSGLLAALEQGQKDTEAKALLLVCEGRTFIAGADIREFGKP- 71
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
M + ++ +VN E+ KP+VAA+ G ALGGGLE A+ CH R+A ++GLP
Sbjct: 72 -------MQEPTLPTLVNTFENSDKPLVAAIHGTALGGGLETALSCHYRVAVSSAKVGLP 124
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 191
E+ LG++PG TQRLPRL G KA+EM+ + + + + LG++DAV +++ V
Sbjct: 125 EVKLGLLPGAGGTQRLPRLTGAQKALEMITTGEFVGANDALALGILDAVEEGDDIRAVGM 184
Query: 192 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 251
+A + KP R TDK+ + + +V R + KK A + C+D +E
Sbjct: 185 AYAQKVVDEGKPVRRVRDITDKIDA-DKGSDVFDQFRDELKKRARGLFSPFKCVDAVEAA 243
Query: 252 IVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV---PNVTDIGLKPRGVRKV 308
G+ +E ++F E + GL+H FF +R SKV P T + R V+ V
Sbjct: 244 FNLPFDEGMKRERELFMECMESPQRAGLIHSFFGEREVSKVKGLPKDTPV----RDVKSV 299
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
+IG G MG GIA + I V + EV + L KG+ I N +GKLTQ++
Sbjct: 300 GIIGAGTMGGGIAMNFVNVGIPVTIVEVKQDALDKGLAIIRRNYENSAKKGKLTQEQVEQ 359
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
+ ++ L Y +F+DVD+VIEAV E + +K++IF++L++ C P ILA+NTST+D++ +
Sbjct: 360 RMALITTSLTYDDFRDVDLVIEAVFEDMAIKKEIFAKLDEVCKPGAILASNTSTLDIDEI 419
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
T + ++G HFFSPA+VM LLE VR +TS +V +M V K IKKV V+VGNC G
Sbjct: 420 ASATKRPEDVVGMHFFSPANVMKLLENVRGSKTSDEVKATVMAVAKKIKKVGVMVGNCYG 479
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR A LV G ++D + G P+G F + DLAG V +E
Sbjct: 480 FVGNRMLHKRGTEAMSLVDEGATPQQVDKVLTDLGFPMGQFAMSDLAGIDVGYRIREERR 539
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGS-KPKPDPSVLPIIEECRRLSNIM 607
KA D + +D L + GR G+ G+Y YE+GS KP PDP V +IE+ R+ I
Sbjct: 540 KAGED--IPASWMDKLAEQGRLGQKTQAGVYKYEEGSRKPIPDPEVEQLIEQFRKEQGIT 597
Query: 608 PGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFW 667
P ++++EI+E ++ ++NE ++LEEGI R D+D + G FP+YRGG +FW
Sbjct: 598 PR----EISDQEILERCVYVMINEGAKILEEGIADRPLDIDIVWIYGYGFPAYRGGPMFW 653
Query: 668 ADAVGANYVYTSLKKWSQ-LYGNFFKPSRFLEERATKG 704
AD G + + +++KK+ + G ++P+ LE+ +G
Sbjct: 654 ADQEGLDTILSAVKKYQDTVGGEQWEPAALLEKLVAEG 691
>gi|170701227|ref|ZP_02892196.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia ambifaria
IOP40-10]
gi|170133856|gb|EDT02215.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia ambifaria
IOP40-10]
Length = 694
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 257/676 (38%), Positives = 377/676 (55%), Gaps = 20/676 (2%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVN L + G+ D + A V AIVLTG G FSGG DI F
Sbjct: 9 DGVAVITLNNPPVNGLGLSTRQGVMDALDRALRDPSVTAIVLTGAGRAFSGGADITEFNT 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + ++ V+ +E KP+VAA+ + +GGGLELA+G H R+AAP Q+
Sbjct: 69 PKA------LQEPTLHTVIRAVEASAKPVVAALHSVVMGGGLELALGAHYRVAAPGAQVA 122
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 189
LPE+ LG++PG TQRLPR VGL A+ M++ + SE+ GL DA+ + LL
Sbjct: 123 LPEVKLGLLPGAGGTQRLPRAVGLETALNMIVSGAPVPSEQLANSGLFDAMADGD-LLDA 181
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
+ +A + A++ P R D+ A ++ AR A+ APN P C+D IE
Sbjct: 182 AVAFACKVGAQKGPHPRV---RDRKIVHENAAGFIQFARNSARAAAPNFPAPHKCIDAIE 238
Query: 250 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKV 308
G+++G G + E + F L+M SR L H FF +RA SK+P+V D + R +R+V
Sbjct: 239 AGVLNGFDKGSVAEREGFVALMMTPESRALRHAFFGERAASKIPDVPADTPV--REIRRV 296
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
VIG G MG GIA I + V L E + L +G+ TI N V +GKLTQ K +
Sbjct: 297 GVIGAGTMGGGIAMNFINAGLPVTLLETKQDALERGLATIRKNYDAQVKKGKLTQQKLDA 356
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
+ ++ L Y + KD D+++EAV E + +K+++F +L+ P ILA+NTST+D++ +
Sbjct: 357 RMALITPTLSYDDLKDADLIVEAVFEELGVKEQVFGQLDAVAKPGAILASNTSTLDVDKI 416
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
T ++G HFFSPA+VM LLE+VR +T+ V+ +M V K I+K VV G C G
Sbjct: 417 AAFTKRPQDVVGMHFFSPANVMKLLEVVRGAQTAKDVLATVMAVAKKIRKTAVVSGVCDG 476
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR Y + A ++ G ++D AI FG +GPF++ DLAG + A K
Sbjct: 477 FIGNRMIEQYIRQALFMLEEGALPAQVDRAIEKFGFAMGPFRMSDLAGNDIGWAIRKRRY 536
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMP 608
PD + S + D L + GR G+ G G Y Y G + K PS L ++E +
Sbjct: 537 VEKPDLQY-SKIADRLCELGRFGQKTGGGWYDYVPGDR-KAKPSAL--VDEMVVAYSKER 592
Query: 609 GGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWA 668
G + + + EIVE ++F +VNE ++LEE I +ASD+D + G FP +RGG + +A
Sbjct: 593 GVERRKIGDDEIVERLVFALVNEGAKILEEKIASKASDIDMVYLTGYGFPLWRGGPMLYA 652
Query: 669 DAVGANYVYTSLKKWS 684
D VG V ++++++
Sbjct: 653 DMVGLYNVERAIRRYA 668
>gi|431929301|ref|YP_007242335.1| 3-hydroxyacyl-CoA dehydrogenase [Pseudomonas stutzeri RCH2]
gi|431827588|gb|AGA88705.1| 3-hydroxyacyl-CoA dehydrogenase [Pseudomonas stutzeri RCH2]
Length = 701
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 253/704 (35%), Positives = 398/704 (56%), Gaps = 22/704 (3%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
V +EV + +A+IT+ NPPVNAL + GL+ F+ A + V+A+ L G F G
Sbjct: 5 VRLEVQGE-IALITVNNPPVNALGQAVREGLQKAFQSAEADPQVRAVALVCEGNTFIAGA 63
Query: 66 DINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA 125
DI F K A S+ V+ +IE C K VA + G ALGGGLE+A+GCH RIA
Sbjct: 64 DIKEFGKPPQA--------PSLPEVIEIIEACNKSSVAVIHGTALGGGLEVALGCHYRIA 115
Query: 126 APKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 182
++GLPE+ LG++PG TQRLPRL G+ KA+EM++ + I++ E + ++D +
Sbjct: 116 RKDAKVGLPEVKLGLLPGAGGTQRLPRLAGVEKALEMIVSGQPISAAEAVEHNIVDELFE 175
Query: 183 SEELLKVSRLWALDIAARRKPWIRSLHRTDKL-GSLSEAREVLKLARLQAKKTAPNMPQH 241
+ L++ + + + R+ +T L G+ +EA +++ + K P +
Sbjct: 176 GD-LVEAGLAYVRRMVEEGRTPRRTGEQTQGLEGADNEA--LIRAKHAEVAKRMPGLFSP 232
Query: 242 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 301
C+ +E G+ +E ++F E + LVH FFA+R K+ ++ K
Sbjct: 233 LRCIAAVEAATKLPLAEGLKRERELFAECLNSPQRGALVHSFFAERQAGKINDLPS-DTK 291
Query: 302 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 361
PR + AVIGGG MG GIA + + V L E+N E L +G++ V RG L
Sbjct: 292 PRSINSAAVIGGGTMGVGIALSFANAGVPVKLLEINEEALQRGLQRARDTYAASVKRGSL 351
Query: 362 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 421
T+D L +++GV +Y+ D D+V+EAV E + +KQ++F +L+ C P ILA+NTS
Sbjct: 352 TEDAMEQRLALIEGVTEYAALADADVVVEAVFEEMGVKQQVFEQLDAICKPGAILASNTS 411
Query: 422 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 481
++DL+ + T + ++G HFFSPA+VM LLE+VR +TS +V+ M +GK +KKV V
Sbjct: 412 SLDLDAIAAFTKRPEDVVGLHFFSPANVMRLLEVVRGAKTSDEVLATAMAIGKQLKKVSV 471
Query: 482 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAA 541
VVG C GF NR F Y + A L+ G ++D+A+R+FG+ +GPF + DL+G +
Sbjct: 472 VVGVCDGFVGNRMVFQYGREAEFLLEEGATPQQVDAALRNFGMAMGPFAMRDLSGLDIGQ 531
Query: 542 ATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEEC 600
A K P + D L +G G+ G G Y YE G++ P+ +P + P++E
Sbjct: 532 AIRKRQRATLPAHLDFPTVSDKLCAAGMLGQKTGAGYYRYEPGNRTPQENPDLAPMLE-- 589
Query: 601 RRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSY 660
+++ G + ++ E+ IVE +F +VNE ++LEEGI R+SD+D + G FP++
Sbjct: 590 --AASLEKGIERKALDEQYIVERCIFALVNEGAKILEEGIAQRSSDIDVIYLNGYGFPAF 647
Query: 661 RGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
RGG +F+AD+VG + V +K+ G+++KP+ LE+ A +G
Sbjct: 648 RGGPMFYADSVGLDRVLARVKELHARCGDWWKPAPLLEKLAAEG 691
>gi|421473060|ref|ZP_15921207.1| enoyl-CoA hydratase/isomerase family protein [Burkholderia
multivorans ATCC BAA-247]
gi|400221799|gb|EJO52227.1| enoyl-CoA hydratase/isomerase family protein [Burkholderia
multivorans ATCC BAA-247]
Length = 694
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 257/676 (38%), Positives = 375/676 (55%), Gaps = 20/676 (2%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVN L + G+ D E A + AIVLTG G FSGG DI F
Sbjct: 9 DGVAVITLNNPPVNGLGLSTRLGIMDALERAVHDPSIAAIVLTGAGRAFSGGADITEFNT 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + ++ V+ +E KP+VAA+ + +GGGLELA+G H R+AA Q+
Sbjct: 69 PKA------LQEPTLHTVIRAVEASAKPVVAALHSVVMGGGLELALGAHYRVAARGAQIA 122
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 189
LPE+ LG++PG TQRLPR VGL A+ M++ + SE+ + GL D + + LL
Sbjct: 123 LPEVKLGLLPGAGGTQRLPRAVGLETALNMIVSGAPVPSEQLAESGLFDQLADGD-LLDA 181
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
+ +A A+ P R D+ A ++ AR K APN P C+D IE
Sbjct: 182 AVAFARKAGAQPGPHPRV---RDRKIVHDNAAGFIQFARNSVKAAAPNFPAPHKCIDAIE 238
Query: 250 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKV 308
G++HG G + E + F L+M SR L H FF +RA SK+P+V D + R +R+V
Sbjct: 239 AGVLHGFDKGSIAEREGFVALMMTPESRALRHAFFGERAASKIPDVPADTPV--RDIRRV 296
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
AVIG G MG GIA + + V L E + L +G+ TI N V +GKLTQ+K
Sbjct: 297 AVIGAGTMGGGIAMNFVNAGLPVTLLETKQDALERGLATIRKNYDAQVKKGKLTQEKLEA 356
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
+ ++ L Y + KD D+++EAV E + +K+++F +L++ P ILA+NTST+D+N +
Sbjct: 357 RMALIAPTLSYDDVKDADLIVEAVFEELGVKEQVFRKLDEVAKPGAILASNTSTLDVNRI 416
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
T ++G HFFSPA+VM LLE+VR +T+ V+ +M V K I+K VV G C G
Sbjct: 417 AAFTKRPQDVVGMHFFSPANVMKLLEVVRGAQTAKDVLATVMAVAKKIRKTAVVSGVCDG 476
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR Y + A ++ G +ID AI FG +GPF++ DLAG + A K
Sbjct: 477 FIGNRMIEQYIRQALFMLEEGALPAQIDRAIEQFGFAMGPFRMSDLAGNDIGWAIRKRRY 536
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMP 608
PD + S + D L + GR G+ G G Y Y G + + PS L ++E +
Sbjct: 537 VEQPDLHY-SKIADRLCEQGRFGQKTGAGWYDYAPGDR-RARPSAL--VDEMVVAYSKER 592
Query: 609 GGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWA 668
G + + + EIVE ++F +VNE ++LEE I +ASD+D + G FP +RGG + +A
Sbjct: 593 GIERRKIADDEIVERLVFALVNEGAKILEEKIASKASDIDMVYLTGYGFPLWRGGPMLYA 652
Query: 669 DAVGANYVYTSLKKWS 684
D VG V ++++++
Sbjct: 653 DMVGLYNVERAIRRYA 668
>gi|392423205|ref|YP_006459809.1| enoyl-CoA hydratase [Pseudomonas stutzeri CCUG 29243]
gi|390985393|gb|AFM35386.1| enoyl-CoA hydratase [Pseudomonas stutzeri CCUG 29243]
Length = 701
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 249/704 (35%), Positives = 398/704 (56%), Gaps = 22/704 (3%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
V +E+ D +A+IT+ NPPVNAL + GL F++A + V+A+ L G F G
Sbjct: 5 VRLEIQGD-IALITVNNPPVNALGQAVREGLLKAFQQAEADQQVRAVALVCEGNTFIAGA 63
Query: 66 DINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA 125
DI F K A S+ V+ +IE C KP VA + G ALGGGLE+A+GCH RIA
Sbjct: 64 DIKEFGKPPQA--------PSLPEVIEVIEGCSKPSVAVIHGTALGGGLEVALGCHYRIA 115
Query: 126 APKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 182
++GLPE+ LG++PG TQRLPRL G+ KA++M++ I++ + + ++D +
Sbjct: 116 RKDAKVGLPEVKLGLLPGAGGTQRLPRLAGVEKALDMIVSGTPISAAKAVEHSIVDELFE 175
Query: 183 SEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQ 242
+ L+ +A + + R+ +T L S ++ +++ + K P +
Sbjct: 176 GD-LVNAGLAYARRMVDEGRAPRRTGEQTRGLDS-ADNEALIRAKHAEVAKRMPGLFSPL 233
Query: 243 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLK 301
C+ +E G+ +E ++F E + LVH FF++R K+ ++ +D+ K
Sbjct: 234 RCIAAVEAATKLPLAEGLKRERELFAECLNSPQRGALVHSFFSERQAGKINDLPSDV--K 291
Query: 302 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 361
PR ++ AVIGGG MG GI + + V L E+N E L +G++ V RG L
Sbjct: 292 PRSIKTAAVIGGGTMGVGITLSFANAGVPVKLLEINDESLQRGLQRARDTYAASVKRGSL 351
Query: 362 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 421
T++ L +++GV +Y+ D D+V+EAV E + +KQ++F +L+ C P ILA+NTS
Sbjct: 352 TEEAMEQRLALVEGVTEYAALADADVVVEAVFEEMGVKQQVFEQLDAVCKPGAILASNTS 411
Query: 422 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 481
++DL+ + T + ++G HFFSPA+VM LLE+VR E+TS +V+ M +GK +KKV V
Sbjct: 412 SLDLDAIAAFTKRPEDVVGLHFFSPANVMRLLEVVRGEKTSDEVLATAMAIGKQLKKVSV 471
Query: 482 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAA 541
VVG C GF NR F Y + A L+ G ++D+A+R+FG+ +GPF + DL+G +
Sbjct: 472 VVGVCDGFVGNRMVFQYGREAEFLLEEGATPQQVDAALRNFGMAMGPFAMRDLSGLDIGQ 531
Query: 542 ATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEEC 600
A K P + D L +G G+ G G Y YE G++ P+ +P + P++E
Sbjct: 532 AIRKRQRATLPAHLDFPTVSDKLCAAGMLGQKTGAGYYRYEPGNRTPQENPDLAPMLEAA 591
Query: 601 RRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSY 660
+ I + ++ E+ IVE +F +VNE ++LEEGI R+SD+D + G FP++
Sbjct: 592 SQEKGI----ERQTLDEQYIVERCIFALVNEGAQILEEGIAQRSSDIDVIYLNGYGFPAF 647
Query: 661 RGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
RGG +F+AD+VG + V +++ G+++KP+ LE+ A +G
Sbjct: 648 RGGPMFYADSVGLDRVLARVRELHARCGDWWKPAPLLEKLAAEG 691
>gi|385333682|ref|YP_005887633.1| fatty oxidation complex alpha subunit [Marinobacter adhaerens HP15]
gi|311696832|gb|ADP99705.1| fatty oxidation complex alpha subunit [Marinobacter adhaerens HP15]
Length = 702
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 255/695 (36%), Positives = 385/695 (55%), Gaps = 21/695 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+ +IT+ PPVNAL + +GL E+ + +A++L G F G DI F K
Sbjct: 18 IGVITVNYPPVNALGQAVRSGLLAALEQGQKDTEARALLLVCEGRTFIAGADIREFGKP- 76
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
M + ++ +VN E+ KP+VAA+ G ALGGGLE A+ CH R+A ++GLP
Sbjct: 77 -------MQEPTLPTLVNTFENSDKPLVAAIHGTALGGGLETALSCHYRVAISSAKVGLP 129
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 191
E+ LG++PG TQRLPRL G KA+EM+ + + +++ LG++DAV +++ V
Sbjct: 130 EVKLGLLPGAGGTQRLPRLTGARKALEMITTGEFVGAKDALALGILDAVEEGDDIRAVGM 189
Query: 192 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 251
+A + KP R TDK+ + +V R + KK A + C+D +E
Sbjct: 190 AYAQKVVDEGKPVRRVRDITDKI-EADKGSDVFDQFRDELKKRARGLFSPFKCVDAVEAA 248
Query: 252 IVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVI 311
G+ +E ++F E + GL+H FF +R SKV ++ R V+ V +I
Sbjct: 249 FNLPFDEGMKRERELFMECMESPQRAGLIHSFFGEREVSKVKGLSK-DTPVRDVKSVGII 307
Query: 312 GGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALK 371
G G MG GIA + I V + EV E L KG+ I N +GKLTQ++ +
Sbjct: 308 GAGTMGGGIAMNFVNVGIPVTIVEVKQEALDKGLAIIRRNYENSAKKGKLTQEQVEQRMA 367
Query: 372 MLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEK 431
++ L Y +F+DVD+VIEAV E++ +K++IF++L++ C P ILA+NTST+D++ +
Sbjct: 368 LITPSLTYDDFRDVDLVIEAVFENMAIKKEIFAKLDEVCKPGAILASNTSTLDIDEIASA 427
Query: 432 TSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAV 491
T + ++G HFFSPA+VM LLE VR +TS +V +M V K IKKV V+VGNC GF
Sbjct: 428 TKRPEDVVGMHFFSPANVMKLLENVRGSKTSDEVKATVMAVAKKIKKVGVMVGNCYGFVG 487
Query: 492 NRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAF 551
NR A LV G ++D + G P+G F + DLAG V +E KA
Sbjct: 488 NRMLHKRGTEAMSLVDEGATPQQVDKVLTDLGFPMGQFAMSDLAGIDVGYRIREERRKAG 547
Query: 552 PDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGS-KPKPDPSVLPIIEECRRLSNIMPGG 610
D + +D L + GR G+ G+Y YE+GS KP PDP V +IE+ R+ I P
Sbjct: 548 ED--IPASWMDKLAEQGRLGQKTQAGVYKYEEGSRKPIPDPEVEQLIEQFRKEQGITPR- 604
Query: 611 KPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADA 670
+T +EI+E ++ ++NE ++LEEGI R D+D + G FP+YRGG +FWAD
Sbjct: 605 ---EITNQEILERCVYVMINEGAKILEEGIADRPLDIDIVWIYGYGFPAYRGGPMFWADQ 661
Query: 671 VGANYVYTSLKKWSQ-LYGNFFKPSRFLEERATKG 704
G + + +++KK+ + G ++P+ LE+ +G
Sbjct: 662 EGLDTILSAVKKYQDTVGGEQWEPAALLEKLVAEG 696
>gi|170692430|ref|ZP_02883593.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia graminis
C4D1M]
gi|170142860|gb|EDT11025.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia graminis
C4D1M]
Length = 694
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 258/700 (36%), Positives = 390/700 (55%), Gaps = 25/700 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+DGVA+ITL NPPVN L + AG+ + E A + ++A+VLTG G FSGG DI F
Sbjct: 8 HDGVAVITLNNPPVNGLGLSTRAGIVEGIERAQNDPAIQAVVLTGAGKAFSGGADITEFN 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ +L V+ +E KP+VAA+ +A+GGGLELA+G H RIAAP Q+
Sbjct: 68 TPKATQEPTLA------TVIKTVEGSAKPVVAAIHSVAMGGGLELALGAHYRIAAPGAQI 121
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
LPE+ LG++PG TQRLPR +GL A+ M++ + S++ GL D + + L +
Sbjct: 122 ALPEVKLGILPGAGGTQRLPRAIGLESALNMIVSGAPVDSQKLAGSGLFDELAEGD-LTQ 180
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 248
+ +A + A++ P + D+ A ++ AR A N P C+D +
Sbjct: 181 AALAFARKVGAKQGPHPKV---RDRKIEHPNAEGFIQFARNSVAAIAKNFPAPLKCIDAV 237
Query: 249 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRK 307
E G+ +G G+ E + F LV SR L H FFA+RA SK+P+V D + R +R+
Sbjct: 238 EAGVKNGFDKGLAFERECFVALVQTPESRALRHAFFAERAASKIPDVPADTPV--REIRQ 295
Query: 308 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 367
VAVIG G MG GIA I I V L E+ + L +G+ TI N V +GKL +
Sbjct: 296 VAVIGAGTMGGGIAMNFINAGIPVTLLEMKQDALERGLATIRNNYEASVKKGKLKPEALQ 355
Query: 368 NALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 427
+ ++ L Y + K+ D+++EAV E + +K+++F L++ P ILA+NTST+D++
Sbjct: 356 ERMALITTTLSYDDLKNADLIVEAVFEELGVKEQVFRRLDEIAKPGAILASNTSTLDVDK 415
Query: 428 VGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 487
+ T ++G HFFSPA+VM LLE+VR E+T+ V+ +M + K IKK VV G C
Sbjct: 416 IAAFTKRPQDVVGTHFFSPANVMKLLEVVRGEKTAKDVLATVMKLAKKIKKTAVVSGVCD 475
Query: 488 GFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEF 547
GF NR Y + A ++ G ++D AI FG +GPF++ DLAG + A K
Sbjct: 476 GFIGNRMIEQYIRQALFMLEEGALPAQVDRAIEKFGFAMGPFRMSDLAGNDIGWAIRKRR 535
Query: 548 DKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLP--IIEECRRLSN 605
+ PD + S + D L +SGR G+ G G Y Y+ G D + P +++E +
Sbjct: 536 YQEQPDMHY-SKIADRLCESGRFGQKTGGGWYDYKAG-----DRTAYPSKMVDEMIVAYS 589
Query: 606 IMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIV 665
G + + + EIVE ++F +VNE ++LEEGI +ASD+D + G FP YRGG +
Sbjct: 590 KETGSERRKIGDDEIVERLVFALVNEGAKILEEGIASKASDIDMVYLTGYGFPLYRGGPM 649
Query: 666 FWADAVGANYVYTSLKKW-SQLYGNFFKPSRFLEERATKG 704
+AD VG V +++++ SQ G+ ++ + + E A +G
Sbjct: 650 LYADTVGLYNVERAIRRYASQPNGDAWQLAPSIAELAAQG 689
>gi|355388875|gb|AER62380.1| hypothetical protein [Pseudoroegneria tauri subsp. libanotica]
Length = 333
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 212/333 (63%), Positives = 264/333 (79%)
Query: 191 RLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 250
R WALDI RKPWI+SL++TD+L L EARE+LK AR QA+K A N+ C+DVIEE
Sbjct: 1 RRWALDICELRKPWIKSLYKTDRLEPLGEAREILKFARAQARKQAANLEHPLVCIDVIEE 60
Query: 251 GIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAV 310
GIV G +G+ KEA F+ L+ DT + L+HVFF+QRATSKVP TD+GL PR + KVA+
Sbjct: 61 GIVSGPRAGLWKEANAFQSLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKITKVAI 120
Query: 311 IGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNAL 370
+GGGLMGSGIATA IL+N V+LKEVN ++L GI I+AN++ V +GK+T+++ AL
Sbjct: 121 LGGGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEKAL 180
Query: 371 KMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGE 430
++ G L Y +FK+VD+VIEAVIE+V LKQ+IF++LEK CP HCILATNTSTIDLN++GE
Sbjct: 181 SLVTGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIGE 240
Query: 431 KTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFA 490
KT SQDRI+GAHFFSPAHVMPLLEIV T+ TSAQV++DL+ VGK IKK P+VVGNCTGFA
Sbjct: 241 KTKSQDRIVGAHFFSPAHVMPLLEIVCTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGFA 300
Query: 491 VNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFG 523
VNR FFPY+QSA L V G+DV++ID A FG
Sbjct: 301 VNRMFFPYTQSALLFVDYGMDVYKIDRACTKFG 333
>gi|299066775|emb|CBJ37969.1| fused 3-hydroxybutyryl-CoA epimerase,
delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase,
enoyl-CoA hydratase, 3-hydroxyacyl-CoA dehydrogenase
[Ralstonia solanacearum CMR15]
Length = 693
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 266/699 (38%), Positives = 380/699 (54%), Gaps = 24/699 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DGVA+ITL NPPVN L G+ + A VKAIV+TG G FSGG DI F
Sbjct: 8 QDGVAVITLSNPPVNGLGHATRLGIVEGMVRAGDDPGVKAIVITGAGKAFSGGADIREFN 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ +L V+ +E KP+VAA+ +A+GGGLELAMGCH R+AAP Q+
Sbjct: 68 TPKATQEPTL------HAVIQAVESSGKPVVAAIHSVAMGGGLELAMGCHYRVAAPGAQI 121
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
LPE+ LG++PG TQRLPR +GL A+ M++ ++ SE+ K GL D ++ + L+
Sbjct: 122 ALPEVKLGILPGAGGTQRLPRAIGLEPALNMIVSGTAVPSEQLAKSGLFDQMIEGD-LMA 180
Query: 189 VSRLWALDIAARRK-PWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDV 247
+ +AL AA K P +R D+ L+ AR A N P C+D
Sbjct: 181 GAIGFALKAAAEGKLPKLR-----DRKVEHDNPEGFLQFARNTVAAVAKNFPAPGKCVDA 235
Query: 248 IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRK 307
++ + G+ E +F LV SR L H FF +RA SK+P+V + R V
Sbjct: 236 VQAAVEKRFDDGIKFERDLFIALVNTTESRALRHAFFGERAASKIPDVPE-DTPVRKVET 294
Query: 308 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 367
VAVIG G MG GIA + I V + E E L +GI TI N +GKLT +K
Sbjct: 295 VAVIGAGTMGGGIAMNFLNAGIPVTILETKQEALDRGIATIRKNYENSAKKGKLTPEKVE 354
Query: 368 NALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 427
+ +LK L Y + +D D+V+EAV E + +K+ +F L+ P ILA+NTST+D++
Sbjct: 355 ARMALLKPTLSYDDIRDADLVVEAVFEDMGVKETVFKTLDAVAKPGAILASNTSTLDVDR 414
Query: 428 VGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 487
+ T ++G HFFSPA+VM LLE+VR + T+ V+ +M + K IKK VV G C
Sbjct: 415 IAGFTRRPQDVVGMHFFSPANVMKLLEVVRGKATAKDVLATVMKLAKAIKKTAVVSGVCD 474
Query: 488 GFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEF 547
GF NR YS+ A L+ G ++D A+ FG +GPF++ DLAG + A K
Sbjct: 475 GFIGNRMIEQYSRQAGYLLDEGALPEQVDRAVEKFGFAMGPFRMGDLAGNDIGWAIRKRR 534
Query: 548 DKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGS-KPKPDPSVLPIIEECRRLSNI 606
PD + S DLL + GR G+ G G Y Y+ G KP P V +I + + I
Sbjct: 535 AVDKPDIVY-SKTADLLCEKGRYGQKTGAGWYDYKTGDRKPYPSQEVNDMILQHSKDLGI 593
Query: 607 MPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVF 666
++++EIVE ++F +VNE ++LEEGI +ASD+D + G FP +RGG +
Sbjct: 594 T----RRKISDEEIVERLVFALVNEGAKILEEGIASKASDIDMVYLTGYGFPLFRGGPML 649
Query: 667 WADAVGANYVYTSLKKWSQLY-GNFFKPSRFLEERATKG 704
+AD VG V +++++ + Y G +KP+ L++ A G
Sbjct: 650 YADTVGLYNVAQAMRRYGKGYHGEAWKPAPLLQKLADAG 688
>gi|224147713|ref|XP_002336529.1| predicted protein [Populus trichocarpa]
gi|222835872|gb|EEE74293.1| predicted protein [Populus trichocarpa]
Length = 268
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 225/265 (84%), Positives = 245/265 (92%), Gaps = 3/265 (1%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR 60
MA P VTMEVGNDGVA++TLINPPVNALAIPI+AGLK+KF+EAT R+DVKA+VLTG GGR
Sbjct: 1 MAKPHVTMEVGNDGVAVVTLINPPVNALAIPIIAGLKEKFDEATRRNDVKALVLTGKGGR 60
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
FSGGFDINVFQKVH GD+SLMPDVSVELVVN IEDCKKP+VAAVEGLALGGGLELAMGC
Sbjct: 61 FSGGFDINVFQKVHATGDISLMPDVSVELVVNTIEDCKKPVVAAVEGLALGGGLELAMGC 120
Query: 121 HARIAAPKTQLGLPELTLGVIP---GTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 177
HARIAAPKTQLGLPELTLGVIP GTQRLPRL+GLSKAIE+MLLSK I SEEG KLGLI
Sbjct: 121 HARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLLGLSKAIEIMLLSKPIMSEEGKKLGLI 180
Query: 178 DAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 237
DA+V S+ELLKVSR WALDI+ RRKPW+RSLHRTDK+GSLSEAREVLK AR QAKK APN
Sbjct: 181 DAIVPSQELLKVSRQWALDISERRKPWLRSLHRTDKIGSLSEAREVLKAARQQAKKIAPN 240
Query: 238 MPQHQACLDVIEEGIVHGGYSGVLK 262
+PQHQA LDV+EEGI+HGGY+GVLK
Sbjct: 241 VPQHQALLDVMEEGIIHGGYNGVLK 265
>gi|167569618|ref|ZP_02362492.1| fatty oxidation complex, alpha subunit, putative [Burkholderia
oklahomensis C6786]
Length = 694
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 257/676 (38%), Positives = 373/676 (55%), Gaps = 18/676 (2%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVN L + G+ + E A V AIVLTG G FSGG DI F
Sbjct: 9 DGVAVITLDNPPVNGLGLSTRLGIMEGLERAQRDPSVAAIVLTGAGRAFSGGADITEFNT 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + ++ V++ +E KP+V A+ G+A+GGGLELA+G H R+A+P Q+
Sbjct: 69 PKA------LQEPTLHTVIDAVEASGKPVVVAIHGVAMGGGLELALGAHYRVASPGAQIA 122
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 189
LPE+ LG++PG TQRLPR VGL A+ M++ + SE+ K GL D +V + LL
Sbjct: 123 LPEVKLGILPGAGGTQRLPRAVGLETALNMIVSGAPVPSEQLAKSGLFDELVEGD-LLDA 181
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
+ +A + A P R D+ A ++ AR K A + P C+D IE
Sbjct: 182 AVAFARKVGAASGPHPRV---RDREIVHQNAAGFIQFARNSVKALAQHYPAPHKCIDAIE 238
Query: 250 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 309
G++ G G+ E F LV SR L H FF +RA SK+P+V G R + VA
Sbjct: 239 AGVLQGFDKGLAFERDCFIALVQTPESRALRHAFFGERAASKIPDVP-AGTPARAIESVA 297
Query: 310 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 369
VIG G MG GIA + + V L E + L +G+ TI N V +GKLTQ+K +
Sbjct: 298 VIGAGTMGGGIAMNFLNAGLPVTLLETKQDALDRGLATIRKNYDAQVKKGKLTQEKLDAR 357
Query: 370 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 429
+ ++K L Y + KD D+VIEAV E + +K+++F L++ P ILA+NTST+D+N +
Sbjct: 358 MALVKPTLAYDDLKDADLVIEAVFEELGVKEQVFRRLDEVAKPGAILASNTSTLDVNKIA 417
Query: 430 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 489
T ++G HFFSPA+VM LLE+VR + T+ V+ +M + K I+K VV G C GF
Sbjct: 418 AFTKRPQDVVGMHFFSPANVMKLLEVVRGDATAKDVLATVMQIAKKIRKTAVVSGVCDGF 477
Query: 490 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDK 549
NR Y + A ++ G ++D AI FG +GPF++ DLAG + A K
Sbjct: 478 IGNRMVEQYIRQALFMLEEGALPAQVDRAIEKFGFAMGPFRMSDLAGNDIGWAIRKRRYV 537
Query: 550 AFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPG 609
PD + S + D L + GR G+ G G Y Y G + K PS L ++E + G
Sbjct: 538 EQPDLHY-SKIADRLCEQGRFGQKTGAGWYDYVPGDR-KAQPSKL--VDEMVAAYSKERG 593
Query: 610 GKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWAD 669
+ + + EIVE +++ +VNE ++LEE I +ASD+D + G FP +RGG + +AD
Sbjct: 594 VERRRIGDAEIVERLVYALVNEGAKILEEKIASKASDIDMVYLTGYGFPLWRGGPMLYAD 653
Query: 670 AVGANYVYTSLKKWSQ 685
VG V +++ +++
Sbjct: 654 TVGLYNVERAMRGYAE 669
>gi|330817251|ref|YP_004360956.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia gladioli BSR3]
gi|327369644|gb|AEA61000.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein [Burkholderia
gladioli BSR3]
Length = 694
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 258/697 (37%), Positives = 389/697 (55%), Gaps = 21/697 (3%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVN L G+ D + A V AIVLTG G FSGG DI F
Sbjct: 9 DGVAVITLNNPPVNGLGYSTRVGVMDGLDRALQDPAVTAIVLTGAGRAFSGGADITEFNT 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + S+ ++ +E KP+VAAV + +GGGLELA+G H RIAAP TQ+
Sbjct: 69 PKA------LQEPSLHTLIAAVEASAKPVVAAVHSVVMGGGLELALGAHYRIAAPGTQVA 122
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 189
LPE+ +G++PG TQRLPR +GL A+ M++ ++ SE+ K GL D + + LL+
Sbjct: 123 LPEVKIGLLPGAGGTQRLPRALGLETALNMIVSGAAVPSEQLAKSGLFDEMAEGD-LLEA 181
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
+ A + A+ P R D+ A ++ AR A+ AP P C+D IE
Sbjct: 182 AVALARRVGAKPGPHPRV---RDRKIEHPNAAGFIQFARNSARAAAPQYPAPHKCIDAIE 238
Query: 250 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKV 308
G++ G G++ E + F LV SR L H FF +RA SK+P+V D + R +RK+
Sbjct: 239 AGVLKGFDQGLIDEREGFVALVQTPESRALRHAFFGERAASKIPDVPADTPV--REIRKL 296
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
VIG G MG GI + + V L E E L +G+ TI N V +GKL+++K
Sbjct: 297 GVIGAGTMGGGITINFLNAGLPVTLLETKQEALERGLATIRKNYEVQVKKGKLSEEKLEA 356
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
+ ++ L Y + KD D++IEAV E + +K+++F +L++ P ILA+NTST+D+N +
Sbjct: 357 RMALISPTLSYEDLKDADLIIEAVFEELGVKEQVFRKLDEVAKPGAILASNTSTLDVNKI 416
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
T ++G HFFSPA+VM LLE+VR E T+ V+ +M + K I+K VV G C G
Sbjct: 417 AAFTRRPQDVVGMHFFSPANVMKLLEVVRGEHTAKDVLATVMQLAKKIRKTAVVSGVCDG 476
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR Y + A ++ G ++D AI +FG +GPF++ DLAG + A K
Sbjct: 477 FIGNRMVEQYIRQALFMLEEGALPAQVDRAIEAFGFAMGPFRMSDLAGNDIGWAIRKRRY 536
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMP 608
P+ + S + D L + GR G+ G G Y Y+ G + + PS L ++E +
Sbjct: 537 LEQPELHY-SKIADRLCELGRFGQKTGGGWYDYQAGER-RAKPSKL--VDEMVLAYSKEA 592
Query: 609 GGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWA 668
G + + ++EIVE +++ +VNE ++LEEGI +ASD+D + G FP +RGG + +A
Sbjct: 593 GVERRKIADEEIVERLVYALVNEGAKILEEGIASKASDIDMVYLTGYGFPLWRGGPMLYA 652
Query: 669 DAVGANYVYTSLKKWSQ-LYGNFFKPSRFLEERATKG 704
D VG V ++++++ G+ ++P+ + + A G
Sbjct: 653 DTVGLYNVERAMRRYAAGANGDAWQPAPSIAKLAAAG 689
>gi|387902459|ref|YP_006332798.1| enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase / 3-hydroxyacyl-CoA dehydrogenase /
3-hydroxybutyryl-CoA epimerase [Burkholderia sp. KJ006]
gi|387577351|gb|AFJ86067.1| Enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase / 3-hydroxyacyl-CoA dehydrogenase /
3-hydroxybutyryl-CoA epimerase [Burkholderia sp. KJ006]
Length = 694
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 258/676 (38%), Positives = 371/676 (54%), Gaps = 20/676 (2%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVN L + G+ E AT V AIVLTG G FSGG DI F
Sbjct: 9 DGVAVITLNNPPVNGLGLSTRQGVMAGLERATQDPAVTAIVLTGAGRAFSGGADITEFNT 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + ++ V+ +E KP+VAA+ +A+GGGLELA+G H RIAAP Q+
Sbjct: 69 PKA------LQEPTLHTVIRAVEASAKPVVAALHSVAMGGGLELALGAHYRIAAPGAQIA 122
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 189
LPE+ LG++PG TQRLPR VGL A+ M++ + SE+ GL DA+ + LL
Sbjct: 123 LPEVKLGLLPGAGGTQRLPRAVGLETALNMIVSGAPVPSEQLATSGLFDAMADGD-LLDA 181
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
+ +A A+ P R D+ A ++ AR A+ APN P C+D IE
Sbjct: 182 AVAFARQAGAQSGPHPRV---RDRKIVHENAAGFIQFARNSARAAAPNFPAPHKCIDAIE 238
Query: 250 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKV 308
G++HG G + E F L+M SR L H FF +RA SK+P+V D + R +R+V
Sbjct: 239 AGVLHGFDKGSVAERDGFVALMMTPESRALRHAFFGERAASKIPDVPADTPV--REIRRV 296
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
V+G G MG GIA + + V L E + L +G+ TI N V +GKLTQ K +
Sbjct: 297 GVVGAGTMGGGIAMNFVNAGLPVTLLETTQDALDRGLATIRKNYDAQVRKGKLTQQKLDA 356
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
+ ++ L Y + D D+V+EAV E + +K+++F L+ P ILA+NTST+D++ +
Sbjct: 357 RMALITPTLSYDDLHDADLVVEAVFEELGVKEQVFGRLDAVAKPGAILASNTSTLDIDRI 416
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
T ++G HFFSPA+VM LLE+VR T+ V+ +M V K I+K VV G C G
Sbjct: 417 AAFTKRPQDVVGMHFFSPANVMKLLEVVRGANTAKDVLATVMAVAKKIRKTAVVSGVCDG 476
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR Y + A ++ G ++D AI FG +GPF++ DLAG + A K
Sbjct: 477 FIGNRMIEQYIRQALFMLEEGALPAQVDRAIEKFGFAMGPFRMSDLAGNDIGWAIRKRRY 536
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMP 608
PD + S + D L + GR G+ G G Y Y G + PS L ++E +
Sbjct: 537 VEQPDLHY-SKIADRLCELGRFGQKTGGGWYDYVAGER-TAKPSAL--VDEMVVAYSNER 592
Query: 609 GGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWA 668
G + + + EIVE ++F +VNE ++LEE I +ASD+D + G FP +RGG + +A
Sbjct: 593 GVERRKIGDDEIVERLVFALVNEGAKILEEKIASKASDIDMVYLTGYGFPLWRGGPMLYA 652
Query: 669 DAVGANYVYTSLKKWS 684
D VG V ++++++
Sbjct: 653 DTVGLYNVERAIRRYA 668
>gi|375105594|ref|ZP_09751855.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderiales bacterium
JOSHI_001]
gi|374666325|gb|EHR71110.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderiales bacterium
JOSHI_001]
Length = 698
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 263/703 (37%), Positives = 392/703 (55%), Gaps = 34/703 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA+ITL NPPVN L AG+ E+A + VKA+V+TG G FSGG DI F K
Sbjct: 11 VAVITLNNPPVNGLGYATRAGIAAGLEKANADAAVKAVVITGAGKAFSGGADIKEFGKPE 70
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
+ +L+ ++ L E KPIVAA+ + +GGGLELA+GCH R++AP + LP
Sbjct: 71 ATAEPNLLS------LIKLCEASGKPIVAALHSVVMGGGLELALGCHYRVSAPGAAIALP 124
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSE-----EGWKLGLIDAVVTSEEL 186
E+ +G++PG TQRLPR++G+ A+ M++ + + SE G KL ID V+ + L
Sbjct: 125 EVKIGLVPGAGGTQRLPRVLGVETALNMIVSGEPVKSELLAAQPGQKL--IDKVIDGD-L 181
Query: 187 LKVSRLWALDIAARRK-PWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACL 245
L + +A+D+A RR P +RSL KL S ++ AR K A N P C+
Sbjct: 182 LAGAIAFAVDVADRRPLPLVRSL----KL-SHPNPDAYIQFARNTVKAMAKNFPAPAKCV 236
Query: 246 DVIEEGIVHGGYS-GVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRG 304
D +E+ + + G+ E F L++ S+ L H FF +RA SK+P+V + R
Sbjct: 237 DCVEQALKAPNFEEGMRFELATFMGLMLTPESKALRHAFFGERAASKIPDVPE-STPQRA 295
Query: 305 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 364
+ KVAVIG G MG GI+ + I V + E+ + L +G+ TI N V +GKL D
Sbjct: 296 IAKVAVIGAGTMGGGISMNFLNAGIPVTMLEMKQDALDRGVATIRKNYEAQVKKGKLKDD 355
Query: 365 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 424
K + +L L Y E KD D+VIEAV E + +K+K+F L++ P ILA+NTST+D
Sbjct: 356 KYQQRMALLTTTLSYDEIKDADLVIEAVFEEIGVKEKVFKALDEVMKPGAILASNTSTLD 415
Query: 425 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 484
++ + T ++G HFFSPA+VM LLE+VR +T+ V+ +M V K I+K VV G
Sbjct: 416 VDKIASFTQRPQDVVGLHFFSPANVMKLLEVVRGAKTAKDVLATVMAVAKKIRKTAVVSG 475
Query: 485 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATS 544
C GF NR YS+ A L+ G ++D AI FG +GPF++ DLAG + A
Sbjct: 476 VCDGFIGNRMIEQYSRQAGFLLEEGASPAQVDKAIERFGFAMGPFRMGDLAGNDIGWAIR 535
Query: 545 KEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVLPIIEECRRL 603
K P+ + S DLL + GR G+ G G Y Y+ G + P +V ++E+ R+
Sbjct: 536 KRRYVEQPNLRY-SKTADLLCEMGRYGQKTGAGWYDYQPGKRDAIPSEAVNKMVEDHRKA 594
Query: 604 SNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGG 663
I P +++ EIV +++ +VNE ++LEEGI +ASD+D + G FP +RGG
Sbjct: 595 LGITPR----KISDDEIVHRLVYSLVNEGAKILEEGIASKASDIDMVYLTGYGFPLHRGG 650
Query: 664 IVFWADAVGANYVYTSLKKWSQL---YGNFFKPSRFLEERATK 703
+ +AD G V ++K+++ +F++P+ L + A +
Sbjct: 651 PMCYADTQGLFNVVQAMKRFAANPLDDADFWQPAPLLAKLAAE 693
>gi|390571716|ref|ZP_10251953.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia terrae BS001]
gi|389936330|gb|EIM98221.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia terrae BS001]
Length = 694
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 262/700 (37%), Positives = 391/700 (55%), Gaps = 25/700 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+DGVA+ITL NPPVN L + G+ + E A +KAIVLTG G FSGG DI F
Sbjct: 8 HDGVAVITLNNPPVNGLGLSTRTGIIEGVERALGDPAIKAIVLTGAGKAFSGGADITEFN 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ +LM V+ +E KP+VAA+ +A+GGGLELA+G H R+AAP Q+
Sbjct: 68 TPKALQEPTLM------TVIKAVEGSAKPVVAAIHSVAMGGGLELALGAHYRVAAPGAQI 121
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
LPE+ LG++PG TQRLPR +GL A+ M++ + SE+ + DA++ + L++
Sbjct: 122 ALPEVKLGILPGAGGTQRLPRALGLEAALNMIVSGTPVMSEKLAGTPIFDALIEGD-LME 180
Query: 189 VSRLWALDIAARR--KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLD 246
+ +A + A+ P IR D+ A ++ AR A N P C+D
Sbjct: 181 GALAFARKVGAQSGPHPKIR-----DRKIEHPNAAGFIQFARNSVAAIAKNFPAPHKCID 235
Query: 247 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGV 305
+E G++ G G+ E + F LV S+ L H FF +RA SK+P+V +D + R +
Sbjct: 236 AVEAGVLKGFEQGMKVERECFLALVQTPESKALRHAFFGERAASKIPDVPSDTPV--RDI 293
Query: 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDK 365
+KVAVIG G MG GIA I + V++ E + L +GI TI N V +GKLT +
Sbjct: 294 KKVAVIGAGTMGGGIAMNFINAGLPVMMLETKQDALDRGIATIRKNYEATVKKGKLTMEA 353
Query: 366 ANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL 425
+ + L Y + KD D++IEAV E + +K+++F L++ P ILA+NTST+DL
Sbjct: 354 LEQRMASITPTLSYDDLKDADLIIEAVFEELGVKEQVFKRLDEVAKPGAILASNTSTLDL 413
Query: 426 NIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 485
N + T ++G HFFSPA+VM LLE+VR + T+ V+ +M V K IKK VV G
Sbjct: 414 NKIAAFTKRPQDVVGMHFFSPANVMKLLEVVRGKDTAKDVLATVMKVAKKIKKTAVVSGV 473
Query: 486 CTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSK 545
C GF NR Y + A ++ G ++D AI FG +GPF++ DLAG + A K
Sbjct: 474 CDGFIGNRMIEQYIRQALFMLEEGALPAQVDKAIEKFGFAMGPFRMSDLAGNDIGWAIRK 533
Query: 546 EFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSN 605
+ PD + S + D L ++GR G+ G G Y Y+ G + PS I+E +
Sbjct: 534 RRYQEHPDMHY-SKVADRLCETGRFGQKTGGGWYDYKAGDR-NAYPS--KQIDEMIVAYS 589
Query: 606 IMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIV 665
G + +++ EIVE ++F +VNE ++LEEGI +ASD+D + G FP +RGG +
Sbjct: 590 KELGVERRKLSDDEIVERLVFALVNEGAKILEEGIASKASDIDMVYLTGYGFPLWRGGPM 649
Query: 666 FWADAVGANYVYTSLKKW-SQLYGNFFKPSRFLEERATKG 704
+AD VG V +++++ +Q G+ ++ + + ERA +G
Sbjct: 650 LYADTVGLYNVEHAIRRYAAQPNGDAWQIAAGIVERAAQG 689
>gi|444371965|ref|ZP_21171470.1| enoyl-CoA hydratase/isomerase family protein [Burkholderia
cenocepacia K56-2Valvano]
gi|443594373|gb|ELT63030.1| enoyl-CoA hydratase/isomerase family protein [Burkholderia
cenocepacia K56-2Valvano]
Length = 694
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 256/676 (37%), Positives = 377/676 (55%), Gaps = 20/676 (2%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVN L + G+ D + A V AIVLTG G FSGG DI F
Sbjct: 9 DGVAVITLNNPPVNGLGLSTRQGVMDALDRAAQDPSVTAIVLTGAGRAFSGGADITEFNT 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + ++ V+ +E KP+VAA+ + +GGGLELA+G H R+AAP Q+
Sbjct: 69 PKA------LQEPTLHTVIRAVEASAKPVVAALHSVVMGGGLELALGAHYRVAAPGAQVA 122
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 189
LPE+ LG++PG TQRLPR VGL A+ M++ + SE+ K GL D + + LL
Sbjct: 123 LPEVKLGLLPGAGGTQRLPRAVGLETALNMIVSGAPVPSEQLAKSGLFDEMADGD-LLDA 181
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
+ +A + A++ P R D+ A ++ AR A+ APN P C+D IE
Sbjct: 182 AVAFARKVGAQKGPHPRV---RDRKIVHDNAAGFIQFARNSARAAAPNYPAPHKCIDAIE 238
Query: 250 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKV 308
G+++G G + E + F L+M SR L H FF +RA SK+P+V D L R +R+V
Sbjct: 239 AGVLNGFDKGSVAEREGFVALMMTPESRALRHAFFGERAASKIPDVPADTPL--REIRRV 296
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
VIG G MG GIA I + V L E + L +G+ TI N V +GKLTQ+K +
Sbjct: 297 GVIGAGTMGGGIAMNFINAGLPVTLLETKQDALERGLATIRKNYDAQVKKGKLTQEKLDA 356
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
+ ++ L + KD D+++EAV E + +K+++F +L++ P ILA+NTST+D++ +
Sbjct: 357 RMALITPTLSCDDLKDADLIVEAVFEELGVKEQVFKKLDEVAKPGAILASNTSTLDVDKI 416
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
T ++G HFFSPA+VM LLE+VR +T+ V+ +M V K I+K VV G C G
Sbjct: 417 AAFTKRPQDVVGMHFFSPANVMKLLEVVRGAQTAKDVLATVMAVAKKIRKTAVVSGVCDG 476
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR Y + A ++ G ++D AI FG +GPF++ DLAG + A K
Sbjct: 477 FIGNRMIEQYIRQALFMLEEGALPAQVDRAIEKFGFAMGPFRMSDLAGNDIGWAIRKRRY 536
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMP 608
P + S + D L + GR G+ G G Y Y G + K PS L ++E +
Sbjct: 537 VEQPGLQY-SKIADRLCEQGRFGQKTGAGWYDYVPGDR-KAKPSSL--VDEMVVAYSKER 592
Query: 609 GGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWA 668
G + + + EIVE ++F +VNE ++LEE I +ASD+D + G FP +RGG + +A
Sbjct: 593 GVERRKIGDDEIVERLVFALVNEGAKILEEKIASKASDIDMVYLTGYGFPLWRGGPMLYA 652
Query: 669 DAVGANYVYTSLKKWS 684
D VG V ++++++
Sbjct: 653 DTVGLYNVERAIRRYA 668
>gi|402566295|ref|YP_006615640.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia cepacia GG4]
gi|402247492|gb|AFQ47946.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia cepacia GG4]
Length = 694
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 255/676 (37%), Positives = 373/676 (55%), Gaps = 20/676 (2%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVN L + G+ D + A V AIVLTG G FSGG DI F
Sbjct: 9 DGVAVITLNNPPVNGLGLSTRQGVMDALDRAAQDPSVTAIVLTGAGRAFSGGADITEFNT 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + ++ V+ +E KP+VAA+ + +GGGLELA+G H RIAAP Q+
Sbjct: 69 PKA------LQEPTLHTVIRAVEASAKPVVAALHSVVMGGGLELALGAHYRIAAPGAQVA 122
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 189
LPE+ LG++PG TQRLPR VGL A+ M++ + SE+ GL D + + LL
Sbjct: 123 LPEVKLGLLPGAGGTQRLPRAVGLETALNMIVSGAPVPSEQLASSGLFDEMADGD-LLDA 181
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
+ +A + ++ P R D+ A ++ AR A+ APN P C+D IE
Sbjct: 182 AVAFARKVGTQKGPHPRV---RDRKIVHENAAGFIQFARNSAQAAAPNFPAPHKCIDAIE 238
Query: 250 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKV 308
G+++G G + E F L+M SR L H FF +RA SK+P+V D + R +R+V
Sbjct: 239 AGVLNGFDKGSVAERDGFVALMMTPESRALRHAFFGERAASKIPDVPADTPV--REIRRV 296
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
VIG G MG GIA + + V L E + L +G+ TI N V +GKLTQ K +
Sbjct: 297 GVIGAGTMGGGIAMNFVNAGLPVTLLETKQDALDRGLATIRKNYDAQVKKGKLTQQKLDA 356
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
+ ++ L Y + KD D+++EAV E + +K+++F L+ P ILA+NTST+D++ +
Sbjct: 357 RMALITPTLSYDDLKDADLIVEAVFEELGVKEQVFGRLDAVAKPGAILASNTSTLDVDKI 416
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
T ++G HFFSPA+VM LLE+VR +T+ V+ +M V K I+K VV G C G
Sbjct: 417 AAFTKRPQDVVGMHFFSPANVMKLLEVVRGAQTAKDVLATVMAVAKKIRKTAVVSGVCDG 476
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR Y + A ++ G ++D AI FG +GPF++ DLAG + A K
Sbjct: 477 FIGNRMIEQYIRQALFMLEEGALPAQVDRAIEKFGFAMGPFRMSDLAGNDIGWAIRKRRY 536
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMP 608
PD + S + D L + GR G+ G G Y Y G + K PS L ++E +
Sbjct: 537 VEQPDLQY-SKIADRLCEQGRFGQKTGGGWYDYVPGER-KAKPSAL--VDEMVVAYSKER 592
Query: 609 GGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWA 668
G + + + EIVE ++F +VNE ++LEE I +ASD+D + G FP +RGG + +A
Sbjct: 593 GVERRKIGDDEIVERLVFALVNEGAKILEEKIASKASDIDMVYLTGYGFPLWRGGPMLYA 652
Query: 669 DAVGANYVYTSLKKWS 684
D VG V ++++++
Sbjct: 653 DMVGLYNVERAIRRYA 668
>gi|420247746|ref|ZP_14751139.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia sp. BT03]
gi|398070461|gb|EJL61761.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia sp. BT03]
Length = 694
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 262/706 (37%), Positives = 393/706 (55%), Gaps = 37/706 (5%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+DGVA+ITL NPPVN L + G+ + E A +KAIVLTG G FSGG DI F
Sbjct: 8 HDGVAVITLNNPPVNGLGLSTRTGIIEGVERALGDPAIKAIVLTGAGKAFSGGADITEFN 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ +LM V+ +E KP+VAA+ +A+GGGLELA+G H R+AAP Q+
Sbjct: 68 TPKALQEPTLM------TVIKAVEGSAKPVVAAIHSVAMGGGLELALGAHYRVAAPGAQI 121
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
LPE+ LG++PG TQRLPR +GL A+ M++ + SE+ + DA++ + L++
Sbjct: 122 ALPEVKLGILPGAGGTQRLPRALGLEAALNMIVSGTPVMSEKLAGTPIFDALIEGD-LME 180
Query: 189 VSRLWALDIAARR--KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLD 246
+ +A + A+ P IR D+ A ++ AR A N P C+D
Sbjct: 181 GALAFARKVGAQSGSHPKIR-----DRKIEHPNAAGFIQFARNSVAAIAKNFPAPHKCID 235
Query: 247 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGV 305
+E G++ G G+ E + F LV S+ L H FF +RA SK+P+V +D + R +
Sbjct: 236 AVEAGVLEGFEQGMKVERECFLALVQTPESKALRHAFFGERAASKIPDVPSDTPV--RDI 293
Query: 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDK 365
+KVAVIG G MG GIA I + V++ E + L +GI TI N V +GKLT +
Sbjct: 294 KKVAVIGAGTMGGGIAMNFINAGLPVMMLETKQDALDRGIATIRKNYEATVKKGKLTMEA 353
Query: 366 ANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL 425
+ + L Y + KD D++IEAV E + +K+++F L++ P ILA+NTST+DL
Sbjct: 354 LEQRMASITPTLSYDDLKDADLIIEAVFEELGVKEQVFKRLDEVAKPGAILASNTSTLDL 413
Query: 426 NIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 485
N + T ++G HFFSPA+VM LLE+VR + T+ V+ +M V K IKK VV G
Sbjct: 414 NKIAAFTKRPQDVVGMHFFSPANVMKLLEVVRGKDTAKDVLATVMKVAKKIKKTAVVSGV 473
Query: 486 CTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSK 545
C GF NR Y + A ++ G ++D AI FG +GPF++ DLAG + A K
Sbjct: 474 CDGFIGNRMIEQYIRQALFMLEEGALPAQVDKAIEKFGFAMGPFRMSDLAGNDIGWAIRK 533
Query: 546 EFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSN 605
+ PD + S + D L ++GR G+ G G Y Y+ G D + P +++
Sbjct: 534 RRYQEHPDMHY-SKIADRLCETGRFGQKTGGGWYDYKAG-----DRNAYP----SKQIDE 583
Query: 606 IMPG-GKPISV-----TEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPS 659
++ G K + V ++ EIVE ++F +VNE ++LEEGI +ASD+D + G FP
Sbjct: 584 MIVGYSKEVGVERRKLSDDEIVERLVFALVNEGAKILEEGIASKASDIDMVYLTGYGFPL 643
Query: 660 YRGGIVFWADAVGANYVYTSLKKW-SQLYGNFFKPSRFLEERATKG 704
+RGG + +AD VG V +++++ +Q G+ ++ + + ERA +G
Sbjct: 644 WRGGPMQYADTVGLYNVEHAIRRYAAQPNGDAWQIAAGIVERAAQG 689
>gi|89901163|ref|YP_523634.1| 3-hydroxyacyl-CoA dehydrogenase [Rhodoferax ferrireducens T118]
gi|89345900|gb|ABD70103.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
[Rhodoferax ferrireducens T118]
Length = 699
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 258/702 (36%), Positives = 386/702 (54%), Gaps = 29/702 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A++TL NPPVN L L D +A + VKAIV+TG G FSGG DI F
Sbjct: 11 IAVLTLNNPPVNGLGYATRLALTDGLAKADADASVKAIVITGAGKAFSGGADIKEF---- 66
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G + + + ++ V+ +IE+ KP++AA+ + +GGGLELA+GCH RIAAP + LP
Sbjct: 67 --GSPTALQEPNLLSVILMIENSSKPVIAAIHSVCMGGGLELALGCHYRIAAPGCSVALP 124
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKL---GLIDAVVTSEE-LL 187
E+ LG++PG TQRLPR +G+ A+ M++ + + SE L L + + TS E L
Sbjct: 125 EVKLGLVPGAGGTQRLPRALGVEPALNMIVSGEPVKSELLAMLPGQQLFNKMATSNESLA 184
Query: 188 KVSRLWALDIAARRK-PWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLD 246
+ + L+A +A R P +R+L G + AR + N P C+D
Sbjct: 185 EEALLYARSVAETRPLPLVRNLPCKHPQGD-----AYFQFARNMVGGMSKNFPAPLKCVD 239
Query: 247 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 306
V++ G+L E + F L+ R L H+F AQRA SK+P+V+ R +
Sbjct: 240 VVQAATTKKFDDGMLFERESFINLMWTPECRALRHIFMAQRAASKIPDVS-ADTPQRAIN 298
Query: 307 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 366
VA+IG G MG GI+ + I V + E+ E L +GI TI N V +GKL QDK
Sbjct: 299 SVAIIGAGTMGGGISMNFLNAGIAVKILEMKQEALDRGIATIRKNYEAQVKKGKLKQDKY 358
Query: 367 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 426
+ +L L Y + KD DMVIEAV E + +K+ +F EL++ P ILA+NTST+D+N
Sbjct: 359 EQRMSLLSTTLSYDDLKDADMVIEAVFEEIGVKEAVFKELDRVMKPGAILASNTSTLDVN 418
Query: 427 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 486
+ T ++G HFFSPA+VM LLE++R E+T+ V+ +M + K IKK VV G C
Sbjct: 419 KIASFTKRPQDVVGMHFFSPANVMKLLEVIRGEKTAKDVLATVMALAKKIKKTAVVSGVC 478
Query: 487 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKE 546
GF NR Y + L+ G ++D A+ FG +GPF++ DLAG + A K
Sbjct: 479 DGFIGNRMIEQYGRQGGFLLDEGCTPAQVDKAVEKFGFAMGPFRMGDLAGNDIGWAIRKR 538
Query: 547 FDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVLPIIEECRRLSN 605
PD + S DLL + GR G+ G G Y Y G + P+ V+ +IE+ R
Sbjct: 539 RYLEKPDMKY-SKTADLLCEKGRFGQKTGAGWYDYVAGKRDAIPNAEVVKMIEDHRAALG 597
Query: 606 IMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIV 665
I P ++++EIV+ +++ +VNE+ +LEEGI +ASD+D ++G FP +RGG +
Sbjct: 598 ITPR----KISDEEIVQRLVYSLVNEAAHILEEGIASKASDIDMVYLMGYGFPIWRGGPM 653
Query: 666 FWADAVGANYVYTSLKKWSQL---YGNFFKPSRFLEERATKG 704
+AD VG V ++ ++++ F++P+ L + A +G
Sbjct: 654 NYADEVGLFNVVQAMHRFAKNPLDDAKFWQPAPLLAKLAAEG 695
>gi|410619733|ref|ZP_11330627.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola polaris LMG 21857]
gi|410160865|dbj|GAC34765.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola polaris LMG 21857]
Length = 702
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 265/709 (37%), Positives = 401/709 (56%), Gaps = 46/709 (6%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA++ + NPPVNAL+ + GL + ++A D+V AIV++ FSGG DI+ F
Sbjct: 13 VAVLYMQNPPVNALSQSVRVGLIENIKQALDNDNVHAIVISSQLALFSGGADISEFS--- 69
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G +P+V +++IE+ KPI+A + G A GGGLE+A+ CH R+ ++GLP
Sbjct: 70 GGNLEPHLPNV-----LDVIENASKPIIAVLNGPAFGGGLEVALSCHYRVTFASNKVGLP 124
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKL-GLIDAVVT------SE 184
E+ LG++PG TQRLPRL G++KA++M++ + E+ KL G+ D +V SE
Sbjct: 125 EVNLGILPGAGGTQRLPRLAGVAKALDMIVSGRP---EKASKLSGVFDLIVEDPSNLLSE 181
Query: 185 ELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 244
+ V ++ A D A RK ++ + S E+ R KK A + C
Sbjct: 182 AMAFVQKVIA-DGAKIRKTADVAIDKA------SAPDELFAQYRQGLKKQARGFFAPERC 234
Query: 245 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRG 304
+ +E + G+++E ++F E + +R H FFA+RA S V + D R
Sbjct: 235 IQAVEASVSLPFEQGLVREGELFMECMGSKEARAQQHFFFAERAASHVSDY-DKSTPVRD 293
Query: 305 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 364
+++V +IG G MG GIA I V++ E+ E L KG+ I N +GKLTQ
Sbjct: 294 IKQVGIIGAGTMGGGIAMNFANAGIPVIMLELKQEALDKGLALIRKNYENSAKKGKLTQQ 353
Query: 365 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 424
+ +L G +Y+ DVD+VIEAV E + +K+++F+ L+K C P ILA+NTST+D
Sbjct: 354 AVEERMALLTGSTEYAALSDVDLVIEAVFEKMSVKKEVFAALDKVCKPGAILASNTSTLD 413
Query: 425 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 484
+N + E TS + +IG HFFSPA+VM LLE+V+ ++TSA+VI M + K I KV V+VG
Sbjct: 414 VNEIAESTSRPEDVIGLHFFSPANVMKLLEVVKADKTSAEVIKTSMQMAKKINKVAVLVG 473
Query: 485 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVA---A 541
C GF NR PY + A L+ G ++D I FGLP+GPF + D+AG +
Sbjct: 474 VCFGFVGNRMIEPYGREAARLMLEGATPQQVDKIIYDFGLPMGPFTMGDMAGLDIGFYVR 533
Query: 542 ATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPII-EE 599
+ +EF + P S D L+K GR G +G+G Y YE G++ P PDP V+ + EE
Sbjct: 534 ESRREFIEHDPSYCVVS---DRLVKQGRVGLKSGRGAYMYEPGNRTPIPDPEVVEMAKEE 590
Query: 600 CRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPS 659
RL G ++E+EI+E I+FP++NE +LEEGI ++SD+D V G FP
Sbjct: 591 AARL-----GVAQRDISEQEILERIIFPLINEGALILEEGIAAKSSDIDVIYVYGYGFPV 645
Query: 660 YRGGIVFWADAVGANYVYTSLKKW----SQLYGNFFKPSRFLEERATKG 704
YRGG + +AD +G VY ++ K+ + G++F+P+ L++ A +G
Sbjct: 646 YRGGPMQYADEIGLKKVYDAMCKYRDELGEYGGHWFEPAPLLKKLAEQG 694
>gi|218196124|gb|EEC78551.1| hypothetical protein OsI_18514 [Oryza sativa Indica Group]
Length = 391
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 204/403 (50%), Positives = 285/403 (70%), Gaps = 13/403 (3%)
Query: 316 MGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG 375
MGSGIATA +L+N V+LKEVN ++L GI I+AN++ V +GK+T++ L +L G
Sbjct: 1 MGSGIATALMLSNYPVLLKEVNDKFLDAGIDRIKANLQSRVRKGKMTKEIYEKTLSLLTG 60
Query: 376 VLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQ 435
V+DY FKD AV+E+V +KQ++F++LE+ CP HC+LATNTSTIDL+++GEKT+SQ
Sbjct: 61 VVDYERFKD------AVVENVKVKQQVFADLERYCPSHCVLATNTSTIDLDLIGEKTNSQ 114
Query: 436 DRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAF 495
DRI AHVMPLLEIVR+ TS QV++DL+ VGK IKK PVVVGNCTGFAVNR F
Sbjct: 115 DRI-------AAHVMPLLEIVRSNHTSPQVVVDLLDVGKKIKKTPVVVGNCTGFAVNRMF 167
Query: 496 FPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRS 555
PY+ A LLV G+DV++ID FG+P+GPF+LLDL G+GVA A+ ++ + P
Sbjct: 168 SPYTSIALLLVDRGMDVYKIDQVCTEFGMPMGPFRLLDLVGFGVALASGMQYLENSPGSV 227
Query: 556 FQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISV 615
+S L+ L+ + R G+A+ KG Y YE K PDP + +E+ RR++ +P + + +
Sbjct: 228 DKSMLIPLMFEDKRTGEASQKGFYKYEGNRKAIPDPDIFKYVEKSRRMAGTVPDLELLKL 287
Query: 616 TEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANY 675
+KEIVEM+ FPV+NE+C+VL EGI +ASDLD AS+ GM FP YRGGIV+WAD++GA
Sbjct: 288 DDKEIVEMVFFPVINEACQVLSEGIANKASDLDIASIFGMGFPPYRGGIVYWADSIGAKR 347
Query: 676 VYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSAPVSSSSTSR 718
++ L +W +G F+P +L ERA +G+PLS+ +++ +R
Sbjct: 348 IHARLSEWEMKHGQLFRPCSYLSERAAEGVPLSSTAKNNAKAR 390
>gi|307729675|ref|YP_003906899.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Burkholderia
sp. CCGE1003]
gi|307584210|gb|ADN57608.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Burkholderia
sp. CCGE1003]
Length = 694
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 259/700 (37%), Positives = 386/700 (55%), Gaps = 25/700 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+DGVA+ITL NPPVN L + G+ + E A +KAIVLTG G FSGG DI F
Sbjct: 8 HDGVAVITLNNPPVNGLGLSTRLGIMEGIERAQRDPGIKAIVLTGAGKAFSGGADITEFN 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ +L V+ +E KP+VAA+ +A+GGGLELA+G H RIAAP Q+
Sbjct: 68 TPKATQEPTLA------TVIKAVEASAKPVVAAIHSVAMGGGLELALGAHYRIAAPGAQI 121
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
LPE+ LG++PG TQRLPR +GL A+ M++ + S++ GL D +V + L
Sbjct: 122 ALPEVKLGILPGAGGTQRLPRAIGLEAALNMIVSGTPVDSQQLAGSGLFDELVQGD-LAT 180
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSE--AREVLKLARLQAKKTAPNMPQHQACLD 246
+ +A + A+ P H T + + A L+ AR A + P C+D
Sbjct: 181 TALAFARKVGAKEGP-----HPTVRERKIEHPNAEGFLQFARNSVAAVAKHFPAPLKCID 235
Query: 247 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGV 305
+E G+ HG G+ E + F LV SR L H FF +RA SK+P+V D + R +
Sbjct: 236 AVEAGVKHGFDKGLAVERECFTALVQTPESRALRHAFFGERAASKIPDVPADTPV--REI 293
Query: 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDK 365
R+VAVIG G MG GIA I I V L E+ E L +G+ TI +N V +GKL +
Sbjct: 294 RRVAVIGAGTMGGGIAMNFINAGIPVTLLEMKQEALERGLATIRSNYEASVKKGKLKPEA 353
Query: 366 ANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL 425
+ ++ L Y + K D+++EAV E + +K+++F L++ P ILA+NTST+D+
Sbjct: 354 VAERMALIAPTLSYDDLKSADLIVEAVFEELGVKEQVFRRLDEIARPGAILASNTSTLDV 413
Query: 426 NIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 485
N + T ++G HFFSPA+VM LLE+VR + T+ V+ +M + K I+K VV G
Sbjct: 414 NRIASFTKRPQDVVGMHFFSPANVMKLLEVVRGKETAKDVLATVMQLAKKIRKTAVVSGV 473
Query: 486 CTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSK 545
C GF NR Y + A ++ G ++D AI FG +GPF++ DLAG + A K
Sbjct: 474 CDGFIGNRMIEQYIRQALFMLEEGALPAQVDRAIEKFGFAMGPFRMSDLAGNDIGWAIRK 533
Query: 546 EFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSN 605
+ PD + S + D L ++GR G+ G G Y Y+ G + PS L ++E +
Sbjct: 534 RRYQEQPDMHY-SKIADRLCETGRFGQKTGGGWYDYKPGER-TAQPSKL--VDEMIVAYS 589
Query: 606 IMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIV 665
G + + ++EIVE ++F +VNE ++LEEGI +ASD+D + G FP +RGG +
Sbjct: 590 KETGTERRKIGDEEIVERLVFALVNEGAKILEEGIASKASDIDMVYLTGYGFPLHRGGPM 649
Query: 666 FWADAVGANYVYTSLKKW-SQLYGNFFKPSRFLEERATKG 704
+AD VG V +++++ +Q G+ ++ + + E A G
Sbjct: 650 LYADTVGLYNVERAIRRYAAQRNGDAWQLAPRIAELAATG 689
>gi|300704070|ref|YP_003745672.1| fused 3-hydroxybutyryl-CoA epimerase,
delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase,
enoyl-CoA hydratase, 3-hydroxyacyl-CoA dehydrogenase
[Ralstonia solanacearum CFBP2957]
gi|299071733|emb|CBJ43057.1| fused 3-hydroxybutyryl-CoA epimerase,
delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase,
enoyl-CoA hydratase, 3-hydroxyacyl-CoA dehydrogenase
[Ralstonia solanacearum CFBP2957]
Length = 693
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 261/698 (37%), Positives = 377/698 (54%), Gaps = 22/698 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DGVA+ITL NPPVN L G+ + +A V+AIV+TG G FSGG DI F
Sbjct: 8 QDGVAVITLSNPPVNGLGHATRLGIVEGMLKAGDDPSVRAIVITGAGKAFSGGADIREFN 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ +L V+ +E KP+VAA+ +A+GGGLELAMGCH R+AAP Q+
Sbjct: 68 TPKATQEPTL------HTVIKAVESSGKPVVAAIHSVAMGGGLELAMGCHYRVAAPGAQI 121
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
LPE+ LG++PG TQRLPR +GL A+ M++ +I SE+ GL D ++ + +
Sbjct: 122 ALPEVKLGILPGAGGTQRLPRAIGLEPALNMIVSGTAIPSEKLAGSGLFDRMIEGDLMAG 181
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 248
A + P +R D+ L+ AR A N P C+D +
Sbjct: 182 AIAFAKQAAADGKLPKLR-----DRKVEHDNPEGFLQFARNTVAAVAKNFPAPGKCVDAV 236
Query: 249 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 308
+ + G+ E +F ELV SR L H FF +RA K+P+V + R V KV
Sbjct: 237 QAAVEKRFDDGIQFERDLFIELVNTTESRALRHAFFGERAAGKIPDVPE-DTPVRKVEKV 295
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
AVIG G MG GI+ + I V + E E L +GI TI N +GKLTQ+K
Sbjct: 296 AVIGAGTMGGGISMNFLNAGIPVTILETRQEALDRGIATIRKNYENSAKKGKLTQEKVEA 355
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
+ +LK L Y + +D D+VIEAV E + +K+ +F +L++ P ILA+NTST+D++ +
Sbjct: 356 RMALLKPTLSYDDIRDADLVIEAVFEDMGVKETVFKKLDEVAKPGAILASNTSTLDVDRI 415
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
T ++G HFFSPA+VM LLE+VR + T+ V+ +M K IKK VV G C G
Sbjct: 416 AGFTKRAQDVVGMHFFSPANVMKLLEVVRGKATAKDVLATVMKTAKAIKKTAVVSGVCDG 475
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR YS+ A L+ G ++D A+ +FG +GPF++ DLAG + A K
Sbjct: 476 FIGNRMIEQYSRQAGYLLDEGALPEQVDRAMETFGFAMGPFRMGDLAGNDIGWAIRKRRA 535
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGS-KPKPDPSVLPIIEECRRLSNIM 607
PD + S DLL + GR G+ G G Y Y+ G KP P V +I + + I
Sbjct: 536 VDKPDIVY-SKTADLLCEKGRFGQKTGAGWYDYKVGDRKPYPSQEVNEMIVQHSKDLGIA 594
Query: 608 PGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFW 667
+++ EIVE +++ +VNE ++LEEGI +ASD+D + G FP +RGG + +
Sbjct: 595 ----RRKISDDEIVERLVYALVNEGAKILEEGIASKASDIDMVYLTGYGFPLFRGGPMLY 650
Query: 668 ADAVGANYVYTSLKKWSQLY-GNFFKPSRFLEERATKG 704
AD VG V ++ ++ + Y G +KP+ L++ A +G
Sbjct: 651 ADTVGLYNVAQAMHRYGKGYHGEAWKPAPLLQKLADEG 688
>gi|99080201|ref|YP_612355.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Ruegeria sp. TM1040]
gi|99036481|gb|ABF63093.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Ruegeria sp. TM1040]
Length = 696
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 255/704 (36%), Positives = 390/704 (55%), Gaps = 26/704 (3%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
V +E+ +D +A+I + NPPVNAL+ + GL F+E RDDVKA V+ G F G
Sbjct: 5 VLLEITDD-IAVIAIANPPVNALSHSVRQGLDAAFDEIARRDDVKAAVIYGTDRTFIAGA 63
Query: 66 DINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA 125
DI F K +PD+ +N IE C P+VAA+ G ALGGGLE+A+G H RIA
Sbjct: 64 DIREFGK---PPQEPFLPDL-----INRIEACAVPVVAALHGTALGGGLEVALGAHYRIA 115
Query: 126 APKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 182
P + GLPE+TLG++PG TQRLPRL G+ A+E + + I +EE G+ID +
Sbjct: 116 VPSARFGLPEVTLGILPGAGGTQRLPRLAGVEFALEAITSGRQIGAEEALAAGVIDRISD 175
Query: 183 SEELLKVSRLWALD-IAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 241
+ ++ ++ +A + IA+ +P RT + + +V + AR + K A
Sbjct: 176 TADIREMGLSYARELIASGAQP-----RRTSDIAPEPVSPDVFEQARAKLAKKARGQLAP 230
Query: 242 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 301
Q C+ +E + G+ E +F+EL+ D L+H FFA+R +KVP + G++
Sbjct: 231 QNCVKAVEGALSLPFAEGLANERALFQELMESDQRAALIHAFFAERQVAKVPEIN--GVE 288
Query: 302 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 361
PR + ++ VIGGG MG+GIA + +L + V L E ++E + + + ++G V RGKL
Sbjct: 289 PRAISRIGVIGGGTMGAGIAVSALLAGLQVTLIERDAEAVSRAETNVAKILQGSVKRGKL 348
Query: 362 TQDKANNALK-MLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 420
TQ+K + ++ + +Y+ D+VIEAV ES+ +K+++F++L+ C P +LA+NT
Sbjct: 349 TQEKFDAIMREAFEASAEYATLATADVVIEAVFESMEVKKEVFTKLDAICKPGAVLASNT 408
Query: 421 STIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVP 480
S +D+N + T+ +IG HFFSPAHVM LLEIV + T+ V + K +KKV
Sbjct: 409 SYLDVNEIAAMTTRPQDVIGLHFFSPAHVMRLLEIVVADETAPDVTATGFALAKRLKKVA 468
Query: 481 VVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVA 540
V G C GF NR Y ++ V G F +D A+ +FGL +GP+ + DLAG +
Sbjct: 469 VRAGVCDGFIGNRILSHYRKAGDGAVLAGASPFEVDRALVNFGLAMGPYAVSDLAGLDIG 528
Query: 541 AATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEEC 600
AT K R + VD L ++G G+ GKG Y Y+ G + P+ VL I E
Sbjct: 529 WATRKRLAPTRDPREVYAEFVDRLCEAGHLGRKTGKGFYVYDDGGQ-TPNAEVLDHIAEE 587
Query: 601 RRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSY 660
R I P E+EIV+ + ++NE+ RV+EEGI +R D+D + G FP +
Sbjct: 588 RAAKGIAAREIP----EQEIVDRYMAAMINEAARVVEEGIALRPLDVDVTLLNGYGFPRW 643
Query: 661 RGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
RGG + +AD VG V +++++Q ++P+ L+ +G
Sbjct: 644 RGGPMQYADTVGLEKVLADIERFAQEDDFLWQPAPLLKRLVAEG 687
>gi|260219460|emb|CBA26305.1| Peroxisomal bifunctional enzyme [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 707
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 263/704 (37%), Positives = 385/704 (54%), Gaps = 33/704 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A+ITL +PPVN L + G+ D +A + VKAIV+TG G FSGG DI F
Sbjct: 19 IAVITLNHPPVNGLGLTTRQGIADGMAQANADAAVKAIVITGAGKAFSGGADITEF---- 74
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G + + ++ V+ ++E KP+VAA+ +A+GGGLELA+GCH RIAAP T + LP
Sbjct: 75 --GSPKALQEPNLISVIKVLESSAKPVVAAIHTVAMGGGLELALGCHYRIAAPGTSIALP 132
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSE-----EGWKLGLIDAVVTSEEL 186
E+ LG++PG TQRLPR++G+ A+ M++ + + SE G KL D + S E
Sbjct: 133 EVKLGLVPGAGGTQRLPRVLGVEPALNMIVSGEPVKSEMLAMLPGQKL--FDKLSASPES 190
Query: 187 LKVSRL-WALDIA-ARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 244
L L +A +A R P +R L G + AR K + N P C
Sbjct: 191 LAEEALAFARSVADVRPLPLVRDLKCKHPQGD-----AYFQFARNMVKGMSKNFPAPAKC 245
Query: 245 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRG 304
+DV+E G+ E + F L+ S+ L H+F A+RA SK+ +V R
Sbjct: 246 VDVVEAATKKKFDEGMQVEREAFINLMFTAESKSLRHLFLAERAASKIADVPS-DTPQRA 304
Query: 305 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 364
+ VAVIG G MG GIA + I V + E+ E L +GI TI N V + KL QD
Sbjct: 305 INSVAVIGAGTMGGGIAMNFLNAGIPVKMLEMKQEALDRGIATIRKNYEAQVVKKKLKQD 364
Query: 365 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 424
K + +L L Y + DMVIEAV E + +K+ +F EL++ P ILA+NTST+D
Sbjct: 365 KYEQRMSLLSTTLSYDDLTGTDMVIEAVFEELGVKEAVFKELDRVMKPGAILASNTSTLD 424
Query: 425 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 484
+N + T + ++G HFFSPA+VM LLE+VR E+T+ V+ +M+V K IKK VV G
Sbjct: 425 VNKIANFTQRPEDVVGLHFFSPANVMKLLEVVRGEKTAKDVMATVMSVAKKIKKTAVVSG 484
Query: 485 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATS 544
C GF NR Y + L+ G ++D A+ FG+ +GPF++ DLAG + A
Sbjct: 485 VCDGFIGNRMIEQYGRQGGFLLDEGCTPEQVDKAMERFGMAMGPFRMGDLAGNDIGWAIR 544
Query: 545 KEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVLPIIEECRRL 603
K P + S DLL + GR G+ G G Y Y G + P+ V+ +IEE R+
Sbjct: 545 KRRYLEKPHMKY-SKTADLLCEKGRFGQKTGAGWYDYVPGKRDAIPNAEVVAMIEEHRKA 603
Query: 604 SNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGG 663
I P ++++EIV+ ++F +VNE+ +LEEGI +ASD+D + G FP++RGG
Sbjct: 604 LGITPR----KISDEEIVQRLVFSLVNEAAHILEEGIAAKASDIDIVYIFGYGFPAHRGG 659
Query: 664 IVFWADAVGANYVYTSLKKWSQL---YGNFFKPSRFLEERATKG 704
+ +AD VG V ++ +++Q F++P+ L + A +G
Sbjct: 660 PMNYADEVGLFNVVQAMNRFAQNPLDDAKFWQPAPLLAKLAAEG 703
>gi|399073892|ref|ZP_10750710.1| 3-hydroxyacyl-CoA dehydrogenase [Caulobacter sp. AP07]
gi|398041049|gb|EJL34131.1| 3-hydroxyacyl-CoA dehydrogenase [Caulobacter sp. AP07]
Length = 692
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 256/709 (36%), Positives = 385/709 (54%), Gaps = 28/709 (3%)
Query: 1 MAAPRVTMEVGNDG-VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGG 59
MAA ++ +G + ++TL +PPVNAL+ + GLK FE A + VKAIVL G
Sbjct: 1 MAAINAVTDLSVEGDIGVVTLNSPPVNALSAAVREGLKGAFEAAIADPAVKAIVLICEGK 60
Query: 60 RFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMG 119
F G DI F K M S++ V N IE+ KP+VAA+ G LGGGLE+A+
Sbjct: 61 TFIAGADITEFGKA--------MTGPSLQDVQNTIENSPKPVVAAIHGTVLGGGLEVALV 112
Query: 120 CHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGL 176
H R+A P + GLPE+ +G++PG TQRLPR+VG+ KA+EM+ + + ++ +GL
Sbjct: 113 AHFRVAVPSAKAGLPEVNIGLLPGAGGTQRLPRVVGVEKALEMVTTGQHVPAKAALAMGL 172
Query: 177 IDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAP 236
D++V + L + +A + A KP R + K+ + E+ R +
Sbjct: 173 FDSIVEEDALRDGAIAFARVVLAEDKPLTRIRDQNAKVEAARGKPEIFSEFRAANARKFR 232
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV- 295
+ + IE + G+ +E K+F EL+ S HVFFA+R +K+P+V
Sbjct: 233 GFLAPENNIKCIEAAVNLPFDEGLKEERKLFMELMTGSQSAAQRHVFFAERQAAKIPDVP 292
Query: 296 TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGL 355
D + P VRKV VIG G MG GI+ + I V + E E L +G+ I N
Sbjct: 293 DDTAIIP--VRKVGVIGAGTMGGGISMNFLNAGIPVTIIEAKQENLDRGVGVIRKNYENT 350
Query: 356 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCI 415
+G+LTQD + +L + + D D++IEAV E + +KQ++F +L+K P I
Sbjct: 351 AKKGRLTQDDVEKRMALLTPSMHLEDLADCDLIIEAVFELMEIKQEVFGKLDKIAKPGAI 410
Query: 416 LATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKI 475
LA+NTS +D++++ TS + +IG HFFSPA+VM LLEIVR +T VI M +GK
Sbjct: 411 LASNTSYLDIDVIAASTSRPESVIGLHFFSPANVMRLLEIVRGAKTDKSVIATSMQIGKK 470
Query: 476 IKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLA 535
I KV V+VGNC GF NR + A+ L+ G + +D + FGLP+GPF + DLA
Sbjct: 471 IGKVAVLVGNCHGFVGNRMLAQRQREAQKLILEGAMPWDVDRVLYDFGLPMGPFAMSDLA 530
Query: 536 GYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLP 595
G + +D P ++ S + ++L + R G+ NGKG Y Y++ KP V
Sbjct: 531 GLDIG------WD---PAKTSSSTVREVLCEMDRRGQKNGKGFYDYDENRVAKPSAEVEK 581
Query: 596 IIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGM 655
+I + I + ++++EI+E L+P+VNE ++LEEG +RASD+D + G
Sbjct: 582 VILDFAEKRQI----QRREISDQEILERCLYPMVNEGAKILEEGKAIRASDIDTVWINGY 637
Query: 656 SFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+P Y GG +FW + VG + V +K + + G+ FKPS LE +G
Sbjct: 638 GWPVYSGGPMFWGELVGLDKVLAGMKAFQEKLGDDFKPSALLERLVAEG 686
>gi|421888133|ref|ZP_16319245.1| fused 3-hydroxybutyryl-CoA
epimerase,delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase, enoyl-CoA hydratase, 3-hydroxyacyl-CoA
dehydrogenase [Ralstonia solanacearum K60-1]
gi|378966523|emb|CCF95993.1| fused 3-hydroxybutyryl-CoA
epimerase,delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase, enoyl-CoA hydratase, 3-hydroxyacyl-CoA
dehydrogenase [Ralstonia solanacearum K60-1]
Length = 693
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 260/698 (37%), Positives = 376/698 (53%), Gaps = 22/698 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DGVA+ITL NPPVN L G+ + +A V+AIV+TG G FSGG DI F
Sbjct: 8 QDGVAVITLSNPPVNGLGHATRLGIVEGMVKAGDDPSVRAIVITGAGKAFSGGADIREFN 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ +L V+ +E KP+VAA+ +A+GGGLELAMGCH R+AAP Q+
Sbjct: 68 TPKATQEPTL------HTVIKAVESSGKPVVAAIHSVAMGGGLELAMGCHYRVAAPGAQI 121
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
LPE+ LG++PG TQRLPR +GL A+ M++ +I SE+ GL D ++ + +
Sbjct: 122 ALPEVKLGILPGAGGTQRLPRAIGLEPALNMIVSGTAIPSEKLAGSGLFDRMIEGDLMAG 181
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 248
A + P +R D+ L+ AR A N P C+D +
Sbjct: 182 AIAFAKQAAADGKLPRLR-----DRKVEHDNPEGFLQFARNTVAAVARNFPAPGKCVDAV 236
Query: 249 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 308
+ + G+ E +F ELV SR L H FF +RA K+P+V + R V +V
Sbjct: 237 QAAVEKRFDDGIKFERDLFIELVNTTESRALRHAFFGERAAGKIPDVPE-DTPVRKVERV 295
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
AVIG G MG GI+ + I V + E E L +G+ TI N +GKLTQ+K
Sbjct: 296 AVIGAGTMGGGISMNFLNAGIPVTILETRQEALDRGVATIRKNYENSAKKGKLTQEKVEA 355
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
+ +LK L Y + +D D+VIEAV E + +K+ +F L++ P ILA+NTST+D++ +
Sbjct: 356 RMALLKPTLSYDDIRDADLVIEAVFEDMGVKEAVFKTLDEVAKPGAILASNTSTLDVDRI 415
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
T ++G HFFSPA+VM LLE+VR + T V+ +M K IKK VV G C G
Sbjct: 416 AGFTRRAQDVVGMHFFSPANVMKLLEVVRGKATGKDVLATVMKTAKAIKKTAVVSGVCDG 475
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR YS+ A L+ G ++D A+ +FG +GPF++ DLAG + A K
Sbjct: 476 FIGNRMIEQYSRQAGYLLDEGALPEQVDRAMETFGFAMGPFRMGDLAGNDIGWAIRKRRA 535
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGS-KPKPDPSVLPIIEECRRLSNIM 607
PD + S DLL + GR G+ G G Y Y+ G KP P V +I + + I
Sbjct: 536 VDKPDIVY-SKTADLLCEKGRFGQKTGAGWYDYKVGDRKPYPSQEVNDMIVQHSKDLGIA 594
Query: 608 PGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFW 667
++++EIVE +++ +VNE ++LEEGI +ASD+D + G FP +RGG + +
Sbjct: 595 ----RRKISDEEIVERLVYALVNEGAKILEEGIASKASDIDMVYLTGYGFPLFRGGPMLY 650
Query: 668 ADAVGANYVYTSLKKWSQLY-GNFFKPSRFLEERATKG 704
AD VG V ++ ++S+ Y G +KP+ L+ A +G
Sbjct: 651 ADTVGLYNVAQAMHRYSKGYHGEAWKPAPLLQRLADEG 688
>gi|134295941|ref|YP_001119676.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Burkholderia vietnamiensis G4]
gi|134139098|gb|ABO54841.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia vietnamiensis G4]
Length = 694
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 255/676 (37%), Positives = 370/676 (54%), Gaps = 20/676 (2%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVN L + G+ E A V AIVLTG G FSGG DI F
Sbjct: 9 DGVAVITLNNPPVNGLGLSTRQGVMAGLERAAQDPAVTAIVLTGAGRAFSGGADITEFNT 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + ++ V+ +E KP+VAA+ +A+GGGLELA+G H RIAAP Q+
Sbjct: 69 PKA------LQEPTLHTVIRAVEASAKPVVAALHSVAMGGGLELALGAHYRIAAPGAQIA 122
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 189
LPE+ LG++PG TQRLPR VGL A+ M++ + SE+ GL DA+ + LL
Sbjct: 123 LPEVKLGLLPGAGGTQRLPRAVGLETALNMIVSGAPVPSEQLATSGLFDAMADGD-LLDA 181
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
+ +A A+ P R D+ A ++ AR A+ APN P C+D IE
Sbjct: 182 AVAFARQAGAQSGPHPRV---RDRKIVHENAAGFIQFARNSARAAAPNFPAPHKCIDAIE 238
Query: 250 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKV 308
G++HG G + E F L+M SR L H FF +RA SK+P+V D + R +R++
Sbjct: 239 AGVLHGFDKGSVAERDGFVALMMTPESRALRHAFFGERAASKIPDVPADTPV--REIRRI 296
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
V+G G MG GIA + + V L E + L +G+ TI N V +GKLTQ K +
Sbjct: 297 GVVGAGTMGGGIAMNFVNAGLPVTLLETTQDALDRGLATIRKNYDAQVRKGKLTQQKLDA 356
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
+ ++ L Y + D D+V+EAV E + +K+++F L+ P ILA+NTST+D++ +
Sbjct: 357 RMALITPTLSYDDLHDADLVVEAVFEELGVKEQVFGRLDAVAKPGAILASNTSTLDIDRI 416
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
T ++G HFFSPA+VM LLE+VR T+ V+ +M V K I+K VV G C G
Sbjct: 417 AAFTKRPQDVVGMHFFSPANVMKLLEVVRGANTAKDVLATVMAVAKKIRKTAVVSGVCDG 476
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR Y + A ++ G ++D AI FG +GPF++ DLAG + A +
Sbjct: 477 FIGNRMIEQYIRQALFMLEEGALPAQVDRAIEKFGFAMGPFRMSDLAGNDIGWAIRRRRY 536
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMP 608
PD + S + D L + GR G+ G G Y Y G + PS L ++E +
Sbjct: 537 VEQPDLHY-SKIADRLCELGRFGQKTGGGWYDYVAGER-TAKPSAL--VDEMVVAYSNER 592
Query: 609 GGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWA 668
G + + + EIVE ++F +VNE ++LEE I +ASD+D + G FP +RGG + +A
Sbjct: 593 GVERRKIGDDEIVERLVFALVNEGAKILEEKIASKASDIDMVYLTGYGFPLWRGGPMLYA 652
Query: 669 DAVGANYVYTSLKKWS 684
D VG V ++++++
Sbjct: 653 DTVGLYNVERAIRRYA 668
>gi|386333461|ref|YP_006029631.1| fused 3-hydroxybutyryl-CoA epimerase [Ralstonia solanacearum Po82]
gi|334195910|gb|AEG69095.1| fused 3-hydroxybutyryl-CoA epimerase [Ralstonia solanacearum Po82]
Length = 1292
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 262/698 (37%), Positives = 377/698 (54%), Gaps = 22/698 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DGVA+ITL NPPVN L G+ + +A V+AIV+TG G FSGG DI F
Sbjct: 607 QDGVAVITLSNPPVNGLGHATRLGIVEGMVKAGDDPSVRAIVITGAGKAFSGGADIREFN 666
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ +L V+ +E KP+VAA+ +A+GGGLELAMGCH R+AAP Q+
Sbjct: 667 TPKATQEPTL------HAVIKAVESSGKPVVAAIHSVAMGGGLELAMGCHYRVAAPGAQI 720
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
LPE+ LG++PG TQRLPR +GL A+ M++ +I SE+ GL D ++ + +
Sbjct: 721 ALPEVKLGILPGAGGTQRLPRAIGLEPALNMIVSGTAIPSEKLAGSGLFDRMIDGDLMAG 780
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 248
A + P +R D+ L+ AR A N P C+D +
Sbjct: 781 AIAFAKQAAADGKLPKLR-----DRQVEHDNPEGFLQFARNTVAAVAKNFPAPGKCIDAV 835
Query: 249 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 308
+ + G+ E +F ELV SR L H FF +RA K+P+V + R V KV
Sbjct: 836 QAAVEKRFDDGLKFERDLFIELVNTTESRALRHAFFGERAAGKIPDVPE-DTPVRKVEKV 894
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
AVIG G MG GI+ + I V + E E L +GI TI N +GKLTQ+K
Sbjct: 895 AVIGAGTMGGGISMNFLNAGIPVTILETRQEALDRGIATIRKNYENSAKKGKLTQEKVEA 954
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
+ +LK L Y + +D D+VIEAV E + +K+ +F +L++ P ILA+NTST+D++ +
Sbjct: 955 RMALLKPTLSYDDIRDADLVIEAVFEDMGVKETVFKKLDEVAKPGAILASNTSTLDVDRI 1014
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
T ++G HFFSPA+VM LLE+VR + T+ V+ +M K IKK VV G C G
Sbjct: 1015 AGFTKRAQDVVGMHFFSPANVMKLLEVVRGKATAKDVLATVMKTAKAIKKTAVVSGVCDG 1074
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR YS+ A L+ G ++D A+ FG +GPF++ DLAG + A K
Sbjct: 1075 FIGNRMIEQYSRQAGYLLDEGALPEQVDRAMEKFGFAMGPFRMGDLAGNDIGWAIRKRRA 1134
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGS-KPKPDPSVLPIIEECRRLSNIM 607
PD + S DLL + GR G+ G G Y Y+ G KP P V +I + + I
Sbjct: 1135 VDKPDIVY-SKTADLLCEKGRFGQKTGAGWYDYKVGDRKPYPSQEVNDMIVQHSKDLGIA 1193
Query: 608 PGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFW 667
++++EIVE +++ +VNE ++LEEGI +ASD+D + G FP +RGG + +
Sbjct: 1194 ----RRKISDEEIVERLVYALVNEGAKILEEGIASKASDIDMVYLTGYGFPLFRGGPMLY 1249
Query: 668 ADAVGANYVYTSLKKWSQLY-GNFFKPSRFLEERATKG 704
AD VG V ++ ++S+ Y G +KP+ L + A +G
Sbjct: 1250 ADTVGLYNVAQAMHRYSKGYHGEAWKPAPLLRKLADEG 1287
>gi|385209669|ref|ZP_10036537.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia sp. Ch1-1]
gi|385182007|gb|EIF31283.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia sp. Ch1-1]
Length = 694
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 250/678 (36%), Positives = 378/678 (55%), Gaps = 22/678 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+DGVA+ITL NPPVN L + AG+ + E A + +KAIVLTG G FSGG DI F
Sbjct: 8 HDGVAVITLNNPPVNGLGLSTRAGIVEGIERAQNDPAIKAIVLTGAGKAFSGGADITEFN 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ +L V+ +E KP+VAA+ +A+GGGLELA+G H R+AAP Q+
Sbjct: 68 TPKATQEPTLA------TVIRTVEGSAKPVVAAIHSVAMGGGLELALGAHYRVAAPGAQI 121
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
LPE+ LG++PG TQRLPR +GL A+ M++ + SE+ GL D + + L +
Sbjct: 122 ALPEVKLGILPGAGGTQRLPRAIGLEAALNMIVSGTPVMSEKLADSGLFDELAQGD-LAE 180
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 248
+ +A + A+ P + D+ A ++ AR A ++P C+D +
Sbjct: 181 AALAFARKVGAKEGPHPKV---RDRKIEHPNAAGFIQFARNSVAAVAKHLPAPHKCIDAV 237
Query: 249 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRK 307
E G+ +G G+ E + F LV SR L H FF +RA SK+P+V +D + R + +
Sbjct: 238 EAGVQNGFDKGLAFERECFVALVQTPESRALRHAFFGERAASKIPDVPSDTPV--RDIDQ 295
Query: 308 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 367
VAVIG G MG GIA I I V L E E L +G+ TI N V +GKL +
Sbjct: 296 VAVIGAGTMGGGIAMNFINAGIPVTLLETKQEALDRGLATIRKNYEASVRKGKLKPEALE 355
Query: 368 NALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 427
+ ++ L Y + K+ D+++EAV E + +K+++F L++ P ILA+NTST+D++
Sbjct: 356 QRMALITPTLSYDDLKNADLIVEAVFEELGVKEQVFRRLDEVAKPGAILASNTSTLDVDK 415
Query: 428 VGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 487
+ T ++G HFFSPA+VM LLE+VR + T+ V+ +M + K I+K VV G C
Sbjct: 416 IAAFTKRPQDVVGMHFFSPANVMKLLEVVRGKETAKDVLATVMKLAKKIRKTAVVSGVCD 475
Query: 488 GFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEF 547
GF NR Y + A ++ GV ++D AI FG +GPF++ DLAG + A K
Sbjct: 476 GFIGNRMIEQYIRQALFMLEEGVLPAQVDRAIEKFGFAMGPFRMSDLAGNDIGWAIRKRR 535
Query: 548 DKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVLPIIEECRRLSNI 606
+ PD + S + D L ++GR G+ G G Y Y+ G + P V +I + +N
Sbjct: 536 YQEHPDMHY-SKIADRLCETGRFGQKTGGGWYDYKAGDRTAYPSKVVDDMIVAFSKEAN- 593
Query: 607 MPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVF 666
+ ++++EIVE ++F +VNE ++LEEGI +ASD+D + G FP YRGG +
Sbjct: 594 ---AERRKISDEEIVERLVFALVNEGAKILEEGIASKASDIDMVYLTGYGFPLYRGGPML 650
Query: 667 WADAVGANYVYTSLKKWS 684
+AD VG V ++++++
Sbjct: 651 YADTVGLYNVERAIRRYA 668
>gi|83748601|ref|ZP_00945620.1| Enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase / 3-hydroxyacyl-CoA dehydrogenase /
3-hydroxybutyryl-CoA epimerase [Ralstonia solanacearum
UW551]
gi|207743140|ref|YP_002259532.1| trifunctonal protein: enoyl-coa hydratase and
delta3-cis-delta2-trans-enoyl-coa isomerase and
3-hydroxyacyl-coa dehydrogenase [Ralstonia solanacearum
IPO1609]
gi|83724725|gb|EAP71884.1| Enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase / 3-hydroxyacyl-CoA dehydrogenase /
3-hydroxybutyryl-CoA epimerase [Ralstonia solanacearum
UW551]
gi|206594537|emb|CAQ61464.1| trifunctonal protein: enoyl-coa hydratase and
delta3-cis-delta2-trans-enoyl-coa isomerase and
3-hydroxyacyl-coa dehydrogenase [Ralstonia solanacearum
IPO1609]
Length = 693
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 261/698 (37%), Positives = 377/698 (54%), Gaps = 22/698 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DGVA+ITL NPPVN L G+ + +A V+AIV+TG G FSGG DI F
Sbjct: 8 QDGVAVITLSNPPVNGLGHATRLGIVEGMVKAGDDPSVRAIVITGAGKAFSGGADIREFN 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ +L V+ +E KP+VAA+ +A+GGGLELAMGCH R+AAP Q+
Sbjct: 68 TPKATQEPTL------HAVIKAVESSGKPVVAAIHSVAMGGGLELAMGCHYRVAAPGAQI 121
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
LPE+ LG++PG TQRLPR +GL A+ M++ +I SE+ GL D ++ + +
Sbjct: 122 ALPEVKLGILPGAGGTQRLPRAIGLEPALNMIVSGTAIPSEKLAGSGLFDRMIEGDLMAG 181
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 248
A + P +R D+ L+ AR A N P C+D +
Sbjct: 182 AIAFAKQAAADGKLPKLR-----DRKVEHDNPEGFLQFARNTVAAVAKNFPAPGKCVDAV 236
Query: 249 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 308
+ + G+ E +F ELV SR L H FF +RA K+P+V + R V KV
Sbjct: 237 QAAVEKRFDDGIQFERDLFIELVNTTESRALRHAFFGERAAGKIPDVPE-DTPVRKVEKV 295
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
AVIG G MG GI+ + I V + E E L +GI TI + +GKLTQ+K
Sbjct: 296 AVIGAGTMGGGISMNFLNAGIPVTILETRQEALDRGIATIRKSYENSAKKGKLTQEKVEA 355
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
+ +LK L Y + +D D+VIEAV E + +K+ +F L++ P ILA+NTST+D++ +
Sbjct: 356 RMALLKPTLSYDDIRDADLVIEAVFEDMGVKETVFKTLDEVVKPGAILASNTSTLDVDRI 415
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
T ++G HFFSPA+VM LLE+VR + T+ V+ +M K IKK VV G C G
Sbjct: 416 AGFTKRAQDVVGMHFFSPANVMKLLEVVRGKATAKDVLATVMKTAKAIKKTAVVSGVCDG 475
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR YS+ A L+ G ++D A+ FG +GPF++ DLAG + A K
Sbjct: 476 FIGNRMIEQYSRQAGYLLDEGALPEQVDRAMEKFGFAMGPFRMGDLAGNDIGWAIRKRRA 535
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGS-KPKPDPSVLPIIEECRRLSNIM 607
PD + S DLL + GR G+ G G Y Y+ G KP P V +I + + I
Sbjct: 536 VDKPDIVY-SKTADLLCEKGRFGQKTGAGWYDYKVGDRKPYPSQEVNDMIVQHSKDLGIA 594
Query: 608 PGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFW 667
++++EIVE +++ +VNE ++LEEGI +ASD+D + G FP +RGG + +
Sbjct: 595 ----RRKISDEEIVERLVYALVNEGAKILEEGIASKASDIDMVYLTGYGFPLFRGGPMLY 650
Query: 668 ADAVGANYVYTSLKKWSQLY-GNFFKPSRFLEERATKG 704
AD VG V ++ ++S+ Y G +KP+ L++ A +G
Sbjct: 651 ADTVGLYNVAQAMHRYSKGYHGEAWKPAPLLQKLADEG 688
>gi|421897544|ref|ZP_16327912.1| trifunctonal protein: enoyl-coa hydratase and
delta3-cis-delta2-trans-enoyl-coa isomerase and
3-hydroxyacyl-coa dehydrogenase [Ralstonia solanacearum
MolK2]
gi|206588750|emb|CAQ35713.1| trifunctonal protein: enoyl-coa hydratase and
delta3-cis-delta2-trans-enoyl-coa isomerase and
3-hydroxyacyl-coa dehydrogenase [Ralstonia solanacearum
MolK2]
Length = 693
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 262/698 (37%), Positives = 377/698 (54%), Gaps = 22/698 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DGVA+ITL NPPVN L G+ + +A V+AIV+TG G FSGG DI F
Sbjct: 8 QDGVAVITLSNPPVNGLGHATRLGIVEGMVKAGDDPSVRAIVITGAGKAFSGGADIREFN 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ +L V+ +E KP+VAA+ +A+GGGLELAMGCH R+AAP Q+
Sbjct: 68 TPKATQEPTL------HAVIKAVESSGKPVVAAIHSVAMGGGLELAMGCHYRVAAPGAQI 121
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
LPE+ LG++PG TQRLPR +GL A+ M++ +I SE+ GL D ++ + +
Sbjct: 122 ALPEVKLGILPGAGGTQRLPRAIGLEPALNMIVSGTAIPSEKLAGSGLFDRMIEGDLMAG 181
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 248
A + P +R D+ L+ AR A N P C+D +
Sbjct: 182 AIAFAKQAAADGKLPKLR-----DRKVEHDNPEGFLQFARNTVAAVAKNFPAPGKCVDAV 236
Query: 249 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 308
+ + G+ E +F ELV SR L H FF +RA K+P+V + R V KV
Sbjct: 237 QAAVEKRFDDGIQFERDLFIELVNTTESRALRHAFFGERAAGKIPDVPE-DTPVRKVEKV 295
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
AVIG G MG GI+ + I V + E E L +GI TI N +GKLTQ+K
Sbjct: 296 AVIGAGTMGGGISMNFLNAGIPVTILETRQEALDRGIATIRKNYENSAKKGKLTQEKVEA 355
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
+ +LK L Y + +D D+VIEAV E + +K+ +F L++ P ILA+NTST+D++ +
Sbjct: 356 RMALLKPTLSYDDIRDADLVIEAVFEDMGVKETVFKTLDEVVKPGAILASNTSTLDVDRI 415
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
T ++G HFFSPA+VM LLE+VR + T+ V+ +M K IKK VV G C G
Sbjct: 416 AGFTRRAQDVVGMHFFSPANVMKLLEVVRGKATAKDVLATVMKTAKAIKKTAVVSGVCDG 475
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR YS+ A L+ G ++D A+ FG +GPF++ DLAG + A K
Sbjct: 476 FIGNRMIEQYSRQAGYLLDEGALPEQVDRAMEKFGFAMGPFRMGDLAGNDIGWAIRKRRA 535
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGS-KPKPDPSVLPIIEECRRLSNIM 607
PD + S DLL + GR G+ G G Y Y+ G KP P V +I + ++
Sbjct: 536 VDKPDIVY-SKTADLLCEKGRFGQKTGAGWYDYKVGDRKPYPSQEVNDMI--VQHSKDLC 592
Query: 608 PGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFW 667
+ IS ++EIVE +++ +VNE ++LEEGI +ASD+D + G FP +RGG + +
Sbjct: 593 IARRKIS--DEEIVERLVYALVNEGAKILEEGIASKASDIDMVYLTGYGFPLFRGGPMLY 650
Query: 668 ADAVGANYVYTSLKKWSQLY-GNFFKPSRFLEERATKG 704
AD VG V ++ ++ + Y G +KP+ L++ A +G
Sbjct: 651 ADTVGLYNVAQAMHRYGKGYHGEAWKPAPLLQKLADEG 688
>gi|323526029|ref|YP_004228182.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Burkholderia
sp. CCGE1001]
gi|323383031|gb|ADX55122.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein protein
[Burkholderia sp. CCGE1001]
Length = 694
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 251/678 (37%), Positives = 374/678 (55%), Gaps = 22/678 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+DGVA+ITL NPPVN L + AG+ + E A ++AIVLTG G FSGG DI F
Sbjct: 8 HDGVAVITLNNPPVNGLGLSTRAGIVEGIERAERDPAIRAIVLTGAGKAFSGGADITEFN 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ +L V+ ++E KP+VAA+ +A+GGGLELA+G H RIAAP Q+
Sbjct: 68 TPKATQEPTLA------TVIKIVEGSAKPVVAAIHSVAMGGGLELALGAHYRIAAPGAQI 121
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
LPE+ LG++PG TQRLPR +GL A+ M++ + S++ GL D +V + L +
Sbjct: 122 ALPEVKLGILPGAGGTQRLPRAIGLEAALNMIVSGAPVDSQKLASSGLFDELVEGD-LAE 180
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 248
+ +A + A+ P + R A ++ AR A + P C+D +
Sbjct: 181 AALAFARKVGAQAGPHPKVRERKI---DHPNAEGFIQFARNSVAAVAKHFPAPLKCIDAV 237
Query: 249 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRK 307
E G+ HG G+ E + F LV SR L H FF +RA SK+P+V D + R +R+
Sbjct: 238 EAGVKHGFDKGLAFERECFVALVQTPESRALRHAFFGERAASKIPDVPADTPV--REIRR 295
Query: 308 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 367
VAVIG G MG GIA + I V L E+ E L +G+ TI N V +GKL +
Sbjct: 296 VAVIGAGTMGGGIAMNFVNAGIPVTLLEMKQEVLQRGLATIRGNYEASVKKGKLKAEALE 355
Query: 368 NALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 427
+ ++ L Y + KD D+++EAV E + +K+++F L++ P ILA+NTST+D+N
Sbjct: 356 ARMALITPTLSYDDLKDADLIVEAVFEELGVKEQVFRRLDEIAKPGAILASNTSTLDVNR 415
Query: 428 VGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 487
+ T ++G HFFSPA+VM LLE+VR + T+ V+ +M + K I+K VV G C
Sbjct: 416 IAAFTKRAQDVVGMHFFSPANVMKLLEVVRGKETAKDVLATVMKLAKQIRKTAVVSGVCD 475
Query: 488 GFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEF 547
GF NR Y + A ++ G ++D AI FG +GPF++ DLAG + A K
Sbjct: 476 GFIGNRMIEQYIRQALFMLEEGALPAQVDRAIEKFGFAMGPFRMSDLAGNDIGWAIRKRR 535
Query: 548 DKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNI 606
+ PD + S + D L ++GR G+ G G Y Y G + +P V +I + N
Sbjct: 536 YQEQPDLHY-SKIADRLCETGRFGQKTGGGWYDYAAGERTARPSTLVDDMIVAYSKEVN- 593
Query: 607 MPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVF 666
+ + + EIVE ++F +VNE ++LEEGI +ASD+D + G FP +RGG +
Sbjct: 594 ---AERRKIGDDEIVERLVFALVNEGAKILEEGIASKASDIDMVYLTGYGFPLHRGGPML 650
Query: 667 WADAVGANYVYTSLKKWS 684
+AD VG V ++++++
Sbjct: 651 YADTVGLYNVERAIRRYA 668
>gi|295688202|ref|YP_003591895.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Caulobacter
segnis ATCC 21756]
gi|295430105|gb|ADG09277.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Caulobacter
segnis ATCC 21756]
Length = 692
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 254/708 (35%), Positives = 385/708 (54%), Gaps = 26/708 (3%)
Query: 1 MAAPRVTMEVGNDG-VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGG 59
MAA + +G V ++TL +PPVNAL+ + GLK F+ A + VKAIVL +G
Sbjct: 1 MAAINAVTDFSVEGDVGVVTLNSPPVNALSAVVREGLKGAFDAAIADPAVKAIVLICDGK 60
Query: 60 RFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMG 119
F G DI F K M S++ V +IE+ KP+VAA+ G ALGGGLE+A+
Sbjct: 61 TFIAGADITEFGKA--------MTGPSLQDVQGVIENSPKPVVAAIHGTALGGGLEVALV 112
Query: 120 CHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGL 176
H R+A P + GLPE+ +G++PG TQRLPR+VG+ KA+EM+ + + ++ +GL
Sbjct: 113 AHYRVAVPSAKAGLPEVNIGLLPGAGGTQRLPRIVGVEKALEMVTSGQHVPAKAAHAMGL 172
Query: 177 IDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAP 236
D +V L + +A + A +P + DK+ + E+ + R K
Sbjct: 173 FDELVEEGSLRAGAIAFARKVVAENRPLKKVRELNDKVEAARGKPEIFESFRAANAKKFR 232
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
+ + +E + G+ +E ++F EL+ S +VFFA+R +K+P+V
Sbjct: 233 GFMAPENNIKCVEAAVNLPFDEGLKEERRLFMELMTGSQSAAQRYVFFAERQAAKIPDVP 292
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D V+KV VIG G MG GIA + I V + E E L +G+ I N
Sbjct: 293 D-DTPTIPVKKVGVIGAGTMGGGIAMNFLNAGIPVTIIEAKQENLERGVGVIRKNYENTA 351
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
+G+LTQD + +L ++ D DM+IEAV E + +K+++F++L+K P IL
Sbjct: 352 KKGRLTQDDVEKRMGLLTPSMEMEALADCDMIIEAVFELMEIKKEVFAKLDKIAKPGAIL 411
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
ATNTS +D+N + TS + +IG HFFSPA+VM LLE+VR ++TS +VI M + K I
Sbjct: 412 ATNTSYLDVNEIAAVTSRPESVIGTHFFSPANVMRLLELVRGDKTSKEVIATCMKLSKTI 471
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
KV V+VG C GF NR + A+ L+ G + +D + FGLP+GPF + DLAG
Sbjct: 472 GKVAVLVGVCYGFVGNRMLAQRQREAQKLILEGAMPWDVDRVLYDFGLPMGPFAMSDLAG 531
Query: 537 YGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPI 596
+ SK + S + ++L + R G+ NGKG Y Y++ P P V +
Sbjct: 532 LDIGWDASK---------TSSSTVREVLCEMDRRGQKNGKGFYDYDENRNASPSPVVEQV 582
Query: 597 IEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMS 656
I + I + ++T++EI+E L+P+VNE ++LEEG +RASD+D + G
Sbjct: 583 IRDFAEKRQI----QRRTITDQEILERCLYPMVNEGAKILEEGKAIRASDIDIVWINGYG 638
Query: 657 FPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+P YRGG +FW + VG + + +K++ YG+ FKPS LE +G
Sbjct: 639 WPVYRGGPMFWGELVGLDKILAKMKEFQAQYGDDFKPSALLERLVAEG 686
>gi|217421439|ref|ZP_03452943.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia pseudomallei
576]
gi|217395181|gb|EEC35199.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia pseudomallei
576]
Length = 694
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 258/677 (38%), Positives = 372/677 (54%), Gaps = 20/677 (2%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVN L + G+ + E A V AIVLTG G FSGG DI F
Sbjct: 9 DGVAVITLNNPPVNGLGLSTRLGIMEGLERAQRDPAVAAIVLTGAGRAFSGGADITEFNT 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + ++ V++ +E KP+V A+ +A+GGGLELA+G H R+A+ Q+
Sbjct: 69 PKA------LQEPTLHTVIDAVEASGKPVVVAIHSVAMGGGLELALGAHYRVASAGAQIA 122
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 189
LPE+ LG++PG TQRLPR VGL A+ M++ + SE+ K GL DA V + LL+V
Sbjct: 123 LPEVKLGLLPGAGGTQRLPRAVGLETALNMIVSGAPVPSEQLAKSGLFDAFVEGD-LLEV 181
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
+ +A A P R D+ A ++ AR K A + P C+D IE
Sbjct: 182 AVAFARKAGAASGPHPRV---RDREIVHENAAGFIQFARNSVKAVAQHYPAPHKCIDAIE 238
Query: 250 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKV 308
G++ G G+ E F LV SR L H FF +RA K+ +V D + RG+ V
Sbjct: 239 AGVLQGFDKGLAFERDCFVALVQTPESRALRHAFFGERAAGKIADVPADTAV--RGIESV 296
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
AVIG G MG GI + + V L E E L +G+ TI N V++GKLTQ+K +
Sbjct: 297 AVIGAGTMGGGITMNFLNAGLPVTLLETKQEALERGLATIRKNYDAQVSKGKLTQEKLDA 356
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
+ +L+ L Y + KD D+VIEAV E + +K+++F L++ P ILA+NTST+D+N +
Sbjct: 357 RMALLRPTLSYDDLKDADLVIEAVFEELGVKEQVFKRLDEVAKPGAILASNTSTLDVNKI 416
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
T ++G HFFSPA+VM LLE+VR E T+ V+ +M + K I+K VV G C G
Sbjct: 417 AAFTRRPQDVVGLHFFSPANVMKLLEVVRGEHTAKDVLATVMQLAKKIRKTAVVSGVCDG 476
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR Y + A ++ G +ID AI +FG +GPF++ DLAG + A K
Sbjct: 477 FIGNRMVEQYIRQALFMLEEGALPAQIDRAIEAFGFAMGPFRMSDLAGNDIGWAIRKRRY 536
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMP 608
PD + S + D L + GR G+ G G Y Y G + + PS L ++E +
Sbjct: 537 VEQPDLHY-SKIADRLCEQGRFGQKTGAGWYDYVPGER-RAKPSKL--VDEMIVAYSSER 592
Query: 609 GGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWA 668
G + + EIVE +++ +VNE ++LEE I +ASD+D + G FP +RGG + +A
Sbjct: 593 GVARRQIGDAEIVERLVYALVNEGAKILEEKIASKASDIDMVYLTGYGFPLWRGGPMLYA 652
Query: 669 DAVGANYVYTSLKKWSQ 685
D VG V +++ ++Q
Sbjct: 653 DTVGLYNVERAMRGYAQ 669
>gi|17065148|gb|AAL32728.1| fatty acid multifunctional protein (AtMFP2) [Arabidopsis thaliana]
Length = 404
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 230/392 (58%), Positives = 294/392 (75%), Gaps = 8/392 (2%)
Query: 5 RVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGG 64
+ MEVG DGVA+ITLINPPVN+L+ ++ LK +EEA SR+DVKAIV+TG GRFSGG
Sbjct: 8 KTVMEVGGDGVAVITLINPPVNSLSFDVLYNLKSNYEEALSRNDVKAIVITGAKGRFSGG 67
Query: 65 FDINVFQKVHGAGDVSLMPD---VSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCH 121
FDI+ F ++ G+V P +S++++ +L+E +KP VAA++GLALGGGLELAM CH
Sbjct: 68 FDISGFGEMQ-KGNVK-EPKAGYISIDIITDLLEAARKPSVAAIDGLALGGGLELAMACH 125
Query: 122 ARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
ARI+AP QLGLPEL LGVIPG TQRLPRLVGL+KA+EM+L SK + +EEG LGLID
Sbjct: 126 ARISAPAAQLGLPELQLGVIPGFGGTQRLPRLVGLTKALEMILTSKPVKAEEGHSLGLID 185
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 238
AVV EL+ +R WALDI RRKPW+ S+ +TDKL L EARE+L A+ Q K APNM
Sbjct: 186 AVVPPAELVTTARRWALDIVGRRKPWVSSVSKTDKLPPLGEAREILTFAKAQTLKRAPNM 245
Query: 239 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDI 298
CLD IE GIV G +G+ KEA+V ++V LDT++GL+HVFF+QR T+KVP VTD
Sbjct: 246 KHPLMCLDAIEVGIVSGPRAGLEKEAEVASQVVKLDTTKGLIHVFFSQRGTAKVPGVTDR 305
Query: 299 GLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTR 358
GL PR ++KVA+IGGGLMGSGIATA IL+N V+LKEVN ++L GI ++AN++ V +
Sbjct: 306 GLVPRKIKKVAIIGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVKANLQSRVRK 365
Query: 359 GKLTQDKANNALKMLKGVLDYSEFKDVDMVIE 390
G ++Q+K + +LKG LDY F+DVDMVIE
Sbjct: 366 GSMSQEKFEKTMSLLKGSLDYESFRDVDMVIE 397
>gi|167562436|ref|ZP_02355352.1| fatty oxidation complex, alpha subunit, putative [Burkholderia
oklahomensis EO147]
Length = 694
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 255/676 (37%), Positives = 371/676 (54%), Gaps = 18/676 (2%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVN L + G+ + E A V AIVLTG G FSGG DI F
Sbjct: 9 DGVAVITLDNPPVNGLGLSTRLGIMEGLERAQRDPSVAAIVLTGAGRAFSGGADITEFNT 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + ++ V++ +E KP+V A+ +A+GGGLELA+G H R+A+P Q+
Sbjct: 69 PKA------LQEPTLHTVIDAVEASGKPVVVAIHSVAMGGGLELALGAHYRVASPGAQIA 122
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 189
LPE+ LG++PG TQRLPR VGL A+ M++ + SE+ K GL D +V + LL
Sbjct: 123 LPEVKLGILPGAGGTQRLPRAVGLETALNMIVSGAPVPSEQLAKSGLFDELVEGD-LLDA 181
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
+ +A + A P R +R A ++ AR K A + P C+D IE
Sbjct: 182 AVAFARKVGAASGPHPRVRNREI---VHENAAGFIQFARNSVKALAQHYPAPHKCIDAIE 238
Query: 250 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 309
G++ G G+ E F LV S L H FF +RA SK+P+V G R + VA
Sbjct: 239 AGVLQGFDKGLAFERDCFIALVQTPESHALRHAFFGERAASKIPDVP-AGTPARVIESVA 297
Query: 310 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 369
VIG G MG GIA + + V L E + L +G+ TI N V +GKLTQ+K +
Sbjct: 298 VIGAGTMGGGIAMNFLNAGLPVTLLETKQDALDRGLATIRKNYDAQVKKGKLTQEKLDAR 357
Query: 370 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 429
+ ++K L Y + KD D+VIEAV E + +K+++F L++ P ILA+NTST+D+N +
Sbjct: 358 MALVKPTLAYDDLKDADLVIEAVFEELGVKEQVFRRLDEVAKPGAILASNTSTLDVNKIA 417
Query: 430 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 489
T ++G HFFSPA+VM LLE+VR + T+ V+ +M + K I+K VV G C GF
Sbjct: 418 AFTKRPQDVVGMHFFSPANVMKLLEVVRGDATAKDVLATVMQIAKKIRKTAVVSGVCDGF 477
Query: 490 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDK 549
NR Y + A ++ G ++D AI FG +GPF++ DLAG + A K
Sbjct: 478 IGNRMVEQYIRQALFMLEEGALPAQVDRAIEKFGFAMGPFRMSDLAGNDIGWAIRKRRYV 537
Query: 550 AFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPG 609
PD + S + D L + GR G+ G G Y Y G + K PS L ++E + G
Sbjct: 538 EQPDLHY-SKIADRLCEQGRFGQKTGAGWYDYVPGDR-KAQPSKL--VDEMVAAYSKERG 593
Query: 610 GKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWAD 669
+ + + EIVE +++ +VNE ++LEE I +ASD+D + G FP +RGG + +AD
Sbjct: 594 VERRRIGDAEIVERLVYALVNEGAKILEEKIASKASDIDMVYLTGYGFPLWRGGPMLYAD 653
Query: 670 AVGANYVYTSLKKWSQ 685
VG V +++ +++
Sbjct: 654 TVGLYNVERAMRGYAE 669
>gi|409396617|ref|ZP_11247597.1| enoyl-CoA hydratase [Pseudomonas sp. Chol1]
gi|409118799|gb|EKM95190.1| enoyl-CoA hydratase [Pseudomonas sp. Chol1]
Length = 705
Score = 424 bits (1089), Expect = e-115, Method: Compositional matrix adjust.
Identities = 253/699 (36%), Positives = 385/699 (55%), Gaps = 23/699 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A++T+ NPPVNAL + + GL A + +V+A+ L G F G DI F +
Sbjct: 13 IALVTVNNPPVNALGVAVRQGLLHALRAAEADAEVRAVALVCAGNTFFAGADIKEFGQPP 72
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
A +P+V + IE C KP VAA+ G ALGGGLE+A+GCH RIA ++GLP
Sbjct: 73 QA---PALPEV-----IAAIEACTKPWVAAIHGTALGGGLEVALGCHYRIARADARVGLP 124
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 191
E+ LG++PG TQRLPRL G++KA+EM++ + IT+ E + ++D + + R
Sbjct: 125 EVKLGLLPGAGGTQRLPRLAGVAKALEMIVSGQPITAAEALEHLIVDELFDGD-----PR 179
Query: 192 LWALDIAARRKPWIRSLHRTDKLG-SLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 250
AL A R R RT +L +++ E++ + + P + C+ +E
Sbjct: 180 AAALAYAQRLLDEGRRPRRTGELSVPGTDSAELIAARHAEVARRTPGLFAPLRCIAAVEA 239
Query: 251 GIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAV 310
G+ +E ++F E + LVH FFA+R K+ ++ +PR + AV
Sbjct: 240 ATRLPLAEGLERERQLFLECLHSPQRAALVHAFFAERQAGKIADLP-AATRPREIATAAV 298
Query: 311 IGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNAL 370
IGGG MG GIA + V L EV+ E L + ++ V RG L++ + L
Sbjct: 299 IGGGTMGVGIALCFANAGVPVKLLEVSDEALQRALQRARDTCAVSVRRGSLSEAEMERRL 358
Query: 371 KMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGE 430
++ GV DY+ +VD+V+EAV E + +KQ++F L+ C P ILA+NTS++DLN +
Sbjct: 359 ALIAGVTDYAALAEVDLVVEAVFEDMAVKQQVFERLDAVCKPGAILASNTSSLDLNQIAA 418
Query: 431 KTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFA 490
T + ++G HFFSPA+VM LLE+VR RTS V+ M +GK +KKV VVVG C GF
Sbjct: 419 FTRRPEDVVGLHFFSPANVMRLLEVVRGARTSHAVLATAMAIGKRLKKVAVVVGVCDGFV 478
Query: 491 VNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKA 550
NR F Y + A L+ G ++D A+R+FG+ +GPF + DL+G + A K
Sbjct: 479 GNRMLFQYGREAEFLLEEGATPQQVDGALRNFGMAMGPFAVRDLSGLDIGQAIRKRQRAL 538
Query: 551 FPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPG 609
P + D L +G G+ G G Y YE G++ P +P++ P++E R +
Sbjct: 539 LPAHLEFPTVADRLCAAGMLGQKTGVGYYRYEPGNRTPLENPALAPMLEAASREKGL--- 595
Query: 610 GKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWAD 669
+ ++ E+ IVE L+ +VNE ++LEEGI RASD+D + G FP++RGG +F AD
Sbjct: 596 -ERQTLDEQYIVERCLYALVNEGAKILEEGIAQRASDIDLIYLNGYGFPAWRGGPMFHAD 654
Query: 670 AVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLS 708
+VG V ++K+ G+++KP+ LE+ A +G S
Sbjct: 655 SVGLAKVLATVKELHARCGDWWKPAPLLEKLAAEGRTFS 693
>gi|167719148|ref|ZP_02402384.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia pseudomallei
DM98]
Length = 694
Score = 424 bits (1089), Expect = e-115, Method: Compositional matrix adjust.
Identities = 257/677 (37%), Positives = 371/677 (54%), Gaps = 20/677 (2%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVN L + G+ + E A V AIVLTG G FSGG DI F
Sbjct: 9 DGVAVITLNNPPVNGLGLSTRLGIMEGLERAQRDPAVAAIVLTGAGRAFSGGADITEFNT 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + ++ V++ +E KP+V A+ +A+GGGLELA+G H R+A+ Q+
Sbjct: 69 PKA------LQEPTLHTVIDAVEASGKPVVVAIHSVAMGGGLELALGAHYRVASAGAQIA 122
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 189
LPE+ LG++PG TQRLPR VGL A+ M++ + SE+ K GL DA V + LL+
Sbjct: 123 LPEVKLGLLPGAGGTQRLPRAVGLETALNMIVSGAPVPSEQLAKSGLFDAFVEGD-LLEA 181
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
+ +A A P R D+ A ++ AR K A + P C+D IE
Sbjct: 182 AVAFARKAGAASGPHPRV---RDREIVHENAAGFIQFARNSVKAVAQHYPAPHKCIDAIE 238
Query: 250 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKV 308
G++ G G+ E F LV SR L H FF +RA K+ +V D + RG+ V
Sbjct: 239 AGVLQGFDKGLAFERDCFVALVQTPESRALRHAFFGERAAGKIADVPADTAV--RGIESV 296
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
AVIG G MG GI + + V L E E L +G+ TI N V++GKLTQ+K +
Sbjct: 297 AVIGAGTMGGGITMNFLNAGLPVTLLETKQEALERGLATIRKNYDAQVSKGKLTQEKLDA 356
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
+ +L+ L Y + KD D+VIEAV E + +K+++F L++ P ILA+NTST+D+N +
Sbjct: 357 RMALLRPTLSYDDLKDADLVIEAVFEELGVKEQVFKRLDEVAKPGAILASNTSTLDVNKI 416
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
T ++G HFFSPA+VM LLE+VR E T+ V+ +M + K I+K VV G C G
Sbjct: 417 AAFTRRPQDVVGLHFFSPANVMKLLEVVRGEHTAKDVLATVMQLAKKIRKTAVVSGVCDG 476
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR Y + A ++ G +ID AI +FG +GPF++ DLAG + A K
Sbjct: 477 FIGNRMVEQYIRQALFMLEEGALPAQIDRAIEAFGFAMGPFRMSDLAGNDIGWAIRKRRY 536
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMP 608
PD + S + D L + GR G+ G G Y Y G + + PS L ++E +
Sbjct: 537 VEQPDLHY-SKIADRLCEQGRFGQKTGAGWYDYVPGER-RAKPSKL--VDEMIVAYSSER 592
Query: 609 GGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWA 668
G + + EIVE +++ +VNE ++LEE I +ASD+D + G FP +RGG + +A
Sbjct: 593 GVARRQIGDAEIVERLVYALVNEGAKILEEKIASKASDIDMVYLTGYGFPLWRGGPMLYA 652
Query: 669 DAVGANYVYTSLKKWSQ 685
D VG V +++ ++Q
Sbjct: 653 DTVGLYNVERAMRGYAQ 669
>gi|134277281|ref|ZP_01763996.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia pseudomallei
305]
gi|134250931|gb|EBA51010.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia pseudomallei
305]
Length = 694
Score = 424 bits (1089), Expect = e-115, Method: Compositional matrix adjust.
Identities = 257/677 (37%), Positives = 371/677 (54%), Gaps = 20/677 (2%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVN L + G+ + E A V AIVLTG G FSGG DI F
Sbjct: 9 DGVAVITLNNPPVNGLGLSTRLGIMEGLERAQRDPAVAAIVLTGAGRAFSGGADITEFNT 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + ++ V++ +E KP+V A+ +A+GGGLELA+G H R+A+ Q+
Sbjct: 69 PKA------LQEPTLHTVIDAVEASGKPVVVAIHSVAMGGGLELALGAHYRVASAGAQIA 122
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 189
LPE+ LG++PG TQRLPR VGL A+ M++ + SE+ K GL DA V + LL+
Sbjct: 123 LPEVKLGLLPGAGGTQRLPRAVGLETALNMIVSGAPVPSEQLAKSGLFDAFVEGD-LLEA 181
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
+ +A A P R D+ A ++ AR K A + P C+D IE
Sbjct: 182 AVAFARKAGAASGPHPRV---RDREIVHENAAGFIQFARNSVKAVAQHYPAPHKCIDAIE 238
Query: 250 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKV 308
G++ G G+ E F LV SR L H FF +RA K+ +V D + RG+ V
Sbjct: 239 AGVLQGFDKGLAFERDCFVALVQTPESRALRHAFFGERAAGKIADVPADTAV--RGIESV 296
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
AVIG G MG GI + + V L E E L +G+ TI N V++GKLTQ+K +
Sbjct: 297 AVIGAGTMGGGITMNFLNAGLPVTLLETKQEALERGLATIRKNYDAQVSKGKLTQEKLDA 356
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
+ +L+ L Y + KD D+VIEAV E + +K+++F L++ P ILA+NTST+D+N +
Sbjct: 357 RMALLRPTLSYDDLKDADLVIEAVFEELGVKEQVFKRLDEVAKPGAILASNTSTLDVNKI 416
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
T ++G HFFSPA+VM LLE+VR E T+ V+ +M + K I+K VV G C G
Sbjct: 417 AAFTGRPQDVVGLHFFSPANVMKLLEVVRGEHTAKDVLATVMQLAKKIRKTAVVSGVCDG 476
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR Y + A ++ G +ID AI +FG +GPF++ DLAG + A K
Sbjct: 477 FIGNRMVEQYIRQALFMLEEGALPAQIDRAIEAFGFAMGPFRMSDLAGNDIGWAIRKRRY 536
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMP 608
PD + S + D L + GR G+ G G Y Y G + + PS L ++E +
Sbjct: 537 VEQPDLHY-SKIADRLCEQGRFGQKTGAGWYDYVPGER-RAKPSKL--VDEMIVAYSSER 592
Query: 609 GGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWA 668
G + + EIVE +++ +VNE ++LEE I +ASD+D + G FP +RGG + +A
Sbjct: 593 GVARRQIGDAEIVERLVYALVNEGAKILEEKIASKASDIDMVYLTGYGFPLWRGGPMLYA 652
Query: 669 DAVGANYVYTSLKKWSQ 685
D VG V +++ ++Q
Sbjct: 653 DTVGLYNVERAMRGYAQ 669
>gi|53723637|ref|YP_103090.1| fatty oxidation complex subunit alpha [Burkholderia mallei ATCC
23344]
gi|76810376|ref|YP_333850.1| fatty oxidation complex subunit alpha [Burkholderia pseudomallei
1710b]
gi|121599487|ref|YP_993247.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
domain-containing protein [Burkholderia mallei SAVP1]
gi|124384112|ref|YP_001029308.1| fatty oxidation complex subunit alpha [Burkholderia mallei NCTC
10229]
gi|126440121|ref|YP_001059329.1| enoyl-CoA hydratase [Burkholderia pseudomallei 668]
gi|126449433|ref|YP_001080755.1| enoyl-CoA hydratase [Burkholderia mallei NCTC 10247]
gi|166998730|ref|ZP_02264584.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia mallei
PRL-20]
gi|167910526|ref|ZP_02497617.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia pseudomallei
112]
gi|167918554|ref|ZP_02505645.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia pseudomallei
BCC215]
gi|226197152|ref|ZP_03792729.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia pseudomallei
Pakistan 9]
gi|238562188|ref|ZP_00440761.2| peroxisomal bifunctional enzyme [Burkholderia mallei GB8 horse 4]
gi|254177997|ref|ZP_04884652.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia mallei ATCC
10399]
gi|254189161|ref|ZP_04895672.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia pseudomallei
Pasteur 52237]
gi|254200037|ref|ZP_04906403.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia mallei FMH]
gi|254206372|ref|ZP_04912724.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia mallei JHU]
gi|254259421|ref|ZP_04950475.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia pseudomallei
1710a]
gi|254358214|ref|ZP_04974487.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia mallei
2002721280]
gi|418540588|ref|ZP_13106116.1| fatty oxidation complex, alpha subunit [Burkholderia pseudomallei
1258a]
gi|418546832|ref|ZP_13112021.1| fatty oxidation complex, alpha subunit [Burkholderia pseudomallei
1258b]
gi|52427060|gb|AAU47653.1| fatty oxidation complex, alpha subunit, putative [Burkholderia
mallei ATCC 23344]
gi|76579829|gb|ABA49304.1| fatty oxidation complex, alpha subunit, putative [Burkholderia
pseudomallei 1710b]
gi|121228297|gb|ABM50815.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia mallei SAVP1]
gi|124292132|gb|ABN01401.1| putative fatty oxidation complex, alpha subunit [Burkholderia
mallei NCTC 10229]
gi|126219614|gb|ABN83120.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia pseudomallei
668]
gi|126242303|gb|ABO05396.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia mallei NCTC
10247]
gi|147749633|gb|EDK56707.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia mallei FMH]
gi|147753815|gb|EDK60880.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia mallei JHU]
gi|148027341|gb|EDK85362.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia mallei
2002721280]
gi|157936840|gb|EDO92510.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia pseudomallei
Pasteur 52237]
gi|160699036|gb|EDP89006.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia mallei ATCC
10399]
gi|225930531|gb|EEH26541.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia pseudomallei
Pakistan 9]
gi|238523039|gb|EEP86480.1| peroxisomal bifunctional enzyme [Burkholderia mallei GB8 horse 4]
gi|243065085|gb|EES47271.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia mallei
PRL-20]
gi|254218110|gb|EET07494.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia pseudomallei
1710a]
gi|385361078|gb|EIF66976.1| fatty oxidation complex, alpha subunit [Burkholderia pseudomallei
1258a]
gi|385362861|gb|EIF68655.1| fatty oxidation complex, alpha subunit [Burkholderia pseudomallei
1258b]
Length = 694
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 257/677 (37%), Positives = 371/677 (54%), Gaps = 20/677 (2%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVN L + G+ + E A V AIVLTG G FSGG DI F
Sbjct: 9 DGVAVITLNNPPVNGLGLSTRLGIMEGLERAQRDPAVAAIVLTGAGRAFSGGADITEFNT 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + ++ V++ +E KP+V A+ +A+GGGLELA+G H R+A+ Q+
Sbjct: 69 PKA------LQEPTLHTVIDAVEASGKPVVVAIHSVAMGGGLELALGAHYRVASAGAQIA 122
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 189
LPE+ LG++PG TQRLPR VGL A+ M++ + SE+ K GL DA V + LL+
Sbjct: 123 LPEVKLGLLPGAGGTQRLPRAVGLETALNMIVSGAPVPSEQLAKSGLFDAFVEGD-LLEA 181
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
+ +A A P R D+ A ++ AR K A + P C+D IE
Sbjct: 182 AVAFARKAGAASGPHPRV---RDREIVHENAAGFIQFARNSVKAVAQHYPAPHKCIDAIE 238
Query: 250 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKV 308
G++ G G+ E F LV SR L H FF +RA K+ +V D + RG+ V
Sbjct: 239 AGVLQGFDKGLAFERDCFVALVQTPESRALRHAFFGERAAGKIADVPADTAV--RGIESV 296
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
AVIG G MG GI + + V L E E L +G+ TI N V++GKLTQ+K +
Sbjct: 297 AVIGAGTMGGGITMNFLNAGLPVTLLETKQEALERGLATIRKNYDAQVSKGKLTQEKLDA 356
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
+ +L+ L Y + KD D+VIEAV E + +K+++F L++ P ILA+NTST+D+N +
Sbjct: 357 RMALLRPTLSYDDLKDADLVIEAVFEELGVKEQVFKRLDEVAKPGAILASNTSTLDVNKI 416
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
T ++G HFFSPA+VM LLE+VR E T+ V+ +M + K I+K VV G C G
Sbjct: 417 AAFTRRPQDVVGLHFFSPANVMKLLEVVRGEHTAKDVLATVMQLAKKIRKTAVVSGVCDG 476
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR Y + A ++ G +ID AI +FG +GPF++ DLAG + A K
Sbjct: 477 FIGNRMVEQYIRQALFMLEEGALPAQIDRAIEAFGFAMGPFRMSDLAGNDIGWAIRKRRY 536
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMP 608
PD + S + D L + GR G+ G G Y Y G + + PS L ++E +
Sbjct: 537 VEQPDLHY-SKIADRLCEQGRFGQKTGAGWYDYVPGER-RAKPSKL--VDEMIVAYSSER 592
Query: 609 GGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWA 668
G + + EIVE +++ +VNE ++LEE I +ASD+D + G FP +RGG + +A
Sbjct: 593 GVARRQIGDAEIVERLVYALVNEGAKILEEKIASKASDIDMVYLTGYGFPLWRGGPMLYA 652
Query: 669 DAVGANYVYTSLKKWSQ 685
D VG V +++ ++Q
Sbjct: 653 DTVGLYNVERAMRGYAQ 669
>gi|53719060|ref|YP_108046.1| fatty acid degradation protein [Burkholderia pseudomallei K96243]
gi|167815336|ref|ZP_02447016.1| putative fatty acid degradation protein (possibly trifunctional)
[Burkholderia pseudomallei 91]
gi|167902285|ref|ZP_02489490.1| putative fatty acid degradation protein (possibly trifunctional)
[Burkholderia pseudomallei NCTC 13177]
gi|237812653|ref|YP_002897104.1| peroxisomal bifunctional enzyme [Burkholderia pseudomallei MSHR346]
gi|254179451|ref|ZP_04886050.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia pseudomallei
1655]
gi|418382845|ref|ZP_12966770.1| fatty oxidation complex, alpha subunit [Burkholderia pseudomallei
354a]
gi|418553051|ref|ZP_13117892.1| fatty oxidation complex, alpha subunit [Burkholderia pseudomallei
354e]
gi|52209474|emb|CAH35426.1| putative fatty acid degradation protein (possibly trifunctional)
[Burkholderia pseudomallei K96243]
gi|184209991|gb|EDU07034.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia pseudomallei
1655]
gi|237506159|gb|ACQ98477.1| peroxisomal bifunctional enzyme [Burkholderia pseudomallei MSHR346]
gi|385372167|gb|EIF77292.1| fatty oxidation complex, alpha subunit [Burkholderia pseudomallei
354e]
gi|385376964|gb|EIF81593.1| fatty oxidation complex, alpha subunit [Burkholderia pseudomallei
354a]
Length = 694
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 257/677 (37%), Positives = 371/677 (54%), Gaps = 20/677 (2%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVN L + G+ + E A V AIVLTG G FSGG DI F
Sbjct: 9 DGVAVITLNNPPVNGLGLSTRLGIMEGLERAQRDPAVAAIVLTGAGRAFSGGADITEFNT 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + ++ V++ +E KP+V A+ +A+GGGLELA+G H R+A+ Q+
Sbjct: 69 PKA------LQEPTLHTVIDAVEASGKPVVVAIHSVAMGGGLELALGAHYRVASAGAQIA 122
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 189
LPE+ LG++PG TQRLPR VGL A+ M++ + SE+ K GL DA V + LL+
Sbjct: 123 LPEVKLGLLPGAGGTQRLPRAVGLETALNMIVSGAPVPSEQLAKSGLFDAFVEGD-LLEA 181
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
+ +A A P R D+ A ++ AR K A + P C+D IE
Sbjct: 182 AVAFARKAGAASGPHPRV---RDREIVHENAAGFIQFARNSVKAVAQHYPAPHKCIDAIE 238
Query: 250 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKV 308
G++ G G+ E F LV SR L H FF +RA K+ +V D + RG+ V
Sbjct: 239 AGVLQGFDKGLAFERDCFVALVQTPESRALRHAFFGERAAGKIADVPADTAV--RGIESV 296
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
AVIG G MG GI + + V L E E L +G+ TI N V++GKLTQ+K +
Sbjct: 297 AVIGAGTMGGGITMNFLNAGLPVTLLETKQEALERGLATIRKNYDAQVSKGKLTQEKLDA 356
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
+ +L+ L Y + KD D+VIEAV E + +K+++F L++ P ILA+NTST+D+N +
Sbjct: 357 RMALLRPTLSYDDLKDADLVIEAVFEELGVKEQVFKRLDEVAKPGAILASNTSTLDVNKI 416
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
T ++G HFFSPA+VM LLE+VR E T+ V+ +M + K I+K VV G C G
Sbjct: 417 AAFTGRPQDVVGLHFFSPANVMKLLEVVRGEHTAKDVLATVMQLAKKIRKTAVVSGVCDG 476
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR Y + A ++ G +ID AI +FG +GPF++ DLAG + A K
Sbjct: 477 FIGNRMVEQYIRQALFMLEEGALPAQIDRAIEAFGFAMGPFRMSDLAGNDIGWAIRKRRY 536
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMP 608
PD + S + D L + GR G+ G G Y Y G + + PS L ++E +
Sbjct: 537 VEQPDLHY-SKIADRLCEQGRFGQKTGAGWYDYVPGER-RAKPSKL--VDEMIVAYSSER 592
Query: 609 GGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWA 668
G + + EIVE +++ +VNE ++LEE I +ASD+D + G FP +RGG + +A
Sbjct: 593 GVARRQIGDAEIVERLVYALVNEGAKILEEKIASKASDIDMVYLTGYGFPLWRGGPMLYA 652
Query: 669 DAVGANYVYTSLKKWSQ 685
D VG V +++ ++Q
Sbjct: 653 DTVGLYNVERAMRGYAQ 669
>gi|449509561|ref|XP_004186281.1| PREDICTED: LOW QUALITY PROTEIN: peroxisomal bifunctional enzyme
[Taeniopygia guttata]
Length = 725
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 269/723 (37%), Positives = 389/723 (53%), Gaps = 48/723 (6%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+ VA+I L NPPVNAL++ ++ L D ++A + VKA+++ G +FS G DI F
Sbjct: 7 SSAVAVIRLCNPPVNALSLAVLQALXDGLKKADADPSVKAVMICGENRKFSAGADIRGFS 66
Query: 72 --KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKT 129
K H + +L P +V+LIE +KP+VAA+EG+ALGGGLE+A+GCH RIA K
Sbjct: 67 SPKRH---EGALGP------IVSLIESSEKPVVAAIEGVALGGGLEVALGCHYRIAHVKA 117
Query: 130 QLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL 186
Q+GLPE+T+G++PG TQRLPRL+GL A++M+ K I + E KLGL+D +V +
Sbjct: 118 QMGLPEVTIGLLPGAEGTQRLPRLIGLPAALDMITTGKHIPATEALKLGLVDEIVEENTI 177
Query: 187 LKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLD 246
RL I P SL +L ++ L+ A ++ KK A + C
Sbjct: 178 EAAIRLANKVIGQPLGPRRLSLKPIPRLPNMEA---FLREALVKVKKQARGCLAPELCFQ 234
Query: 247 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK---PR 303
+ GV +E ++F+ L+ +R L + FFA+RA + + P+
Sbjct: 235 AVRAAAERPFAEGVRRERELFQVLLTSGQARALQYAFFAERAVRRWATPSGASWSSAAPQ 294
Query: 304 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQ 363
VRK AVIG G MG GI T+ + NI +V E + EYL KG K + L+ R +
Sbjct: 295 PVRKAAVIGLGTMGRGIVTSLVKANIPLVALEQDLEYLNKGRKAVML----LLEREAMKM 350
Query: 364 DKANNALKM-----LKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 418
++ AL L+ +D+ VD+VIEAV E++ LK++IF +L K C P +L T
Sbjct: 351 ERGAQALDFHNPARLQFTVDFDLLHHVDLVIEAVFENMALKKEIFHKLSKICKPGALLCT 410
Query: 419 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKK 478
NTS ++++ + TS ++IG HFFSPAHVM LLEI+ TS I M + K +KK
Sbjct: 411 NTSALNIDEIASATSCPQQVIGTHFFSPAHVMRLLEIIYGRHTSPTAIATAMQLAKALKK 470
Query: 479 VPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYG 538
V VVVGNC GF NR FPY Q A L+ G +D + FG +GPF++ DLAG
Sbjct: 471 VGVVVGNCFGFVGNRMMFPYVQQAVFLLEEGSRPEAVDQVLEDFGFKLGPFRMSDLAGLD 530
Query: 539 VAAATSKE-------FDKAFPDRSFQ----SPLVDLLLKSGRNGKANGKGLYTYEK--GS 585
V + K+ P R SPL DLL + GR G+ GKG Y YE+ G
Sbjct: 531 VGWRSRKDQGLTGPSLPAGTPARQRHGQRYSPLPDLLCEQGRFGQKTGKGWYQYERAGGR 590
Query: 586 KPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRAS 645
+PDP + + R +I K + ++EI+E LF ++NE +L EGI
Sbjct: 591 TARPDPWLHSFLSHYRDTHHI----KSRFIDQEEILERCLFSLINEGFAILAEGIASGPE 646
Query: 646 DLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF--FKPSRFLEERATK 703
LD + G +P +RGG +F+A VG V L+K+S+++ + +PS FL++
Sbjct: 647 HLDVIYINGYGWPKHRGGPMFYASTVGLPRVLAKLQKYSEVHPDVPELRPSAFLKKLVAA 706
Query: 704 GIP 706
G P
Sbjct: 707 GNP 709
>gi|386861445|ref|YP_006274394.1| fatty oxidation complex subunit alpha [Burkholderia pseudomallei
1026b]
gi|418533716|ref|ZP_13099575.1| fatty oxidation complex, alpha subunit [Burkholderia pseudomallei
1026a]
gi|385360676|gb|EIF66590.1| fatty oxidation complex, alpha subunit [Burkholderia pseudomallei
1026a]
gi|385658573|gb|AFI65996.1| fatty oxidation complex, alpha subunit [Burkholderia pseudomallei
1026b]
Length = 694
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 256/677 (37%), Positives = 371/677 (54%), Gaps = 20/677 (2%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVN L + G+ + E A V AIVLTG G FSGG DI F
Sbjct: 9 DGVAVITLNNPPVNGLGLSTRLGIMEGLERAQRDPAVAAIVLTGAGRAFSGGADITEFNT 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + ++ V++ +E KP+V A+ +A+GGGLELA+G H R+A+ Q+
Sbjct: 69 PKA------LQEPTLHTVIDAVEASGKPVVVAIHSVAMGGGLELALGAHYRVASAGAQIA 122
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 189
LPE+ LG++PG TQRLPR VGL A+ M++ + SE+ K GL DA V + LL+
Sbjct: 123 LPEVKLGLLPGAGGTQRLPRAVGLETALNMIVSGAPVPSEQLAKSGLFDAFVEGD-LLEA 181
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
+ +A A P R D+ A ++ AR K A + P C+D IE
Sbjct: 182 AVAFARKAGAASGPHPRV---RDREIVHENAAGFIQFARNSVKAVAQHYPAPHKCIDAIE 238
Query: 250 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKV 308
G++ G G+ E F LV SR L H FF +RA K+ +V D + RG+ V
Sbjct: 239 AGVLQGFDKGLAFERDCFVALVQTPESRALRHAFFGERAAGKIADVPADTAV--RGIESV 296
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
AVIG G MG GI + + V L E E L +G+ TI N V++GKLTQ+K +
Sbjct: 297 AVIGAGTMGGGITMNFLNAGLPVTLLETKQEALERGLATIRKNYDAQVSKGKLTQEKLDA 356
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
+ +L+ L Y + KD D+VIEAV E + +K+++F L++ P ILA+NTST+D+N +
Sbjct: 357 RMALLRPTLSYDDLKDADLVIEAVFEELGVKEQVFKRLDEVAKPGAILASNTSTLDVNKI 416
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
T ++G HFFSPA+VM LLE+VR E T+ V+ +M + K ++K VV G C G
Sbjct: 417 AAFTRRPQDVVGLHFFSPANVMKLLEVVRGEHTAKDVLATVMQLAKKVRKTAVVSGVCDG 476
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR Y + A ++ G +ID AI +FG +GPF++ DLAG + A K
Sbjct: 477 FIGNRMVEQYIRQALFMLEEGALPAQIDRAIEAFGFAMGPFRMSDLAGNDIGWAIRKRRY 536
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMP 608
PD + S + D L + GR G+ G G Y Y G + + PS L ++E +
Sbjct: 537 VEQPDLHY-SKIADRLCEQGRFGQKTGAGWYDYVPGER-RAKPSKL--VDEMIVAYSSER 592
Query: 609 GGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWA 668
G + + EIVE +++ +VNE ++LEE I +ASD+D + G FP +RGG + +A
Sbjct: 593 GVARRQIGDAEIVERLVYALVNEGAKILEEKIASKASDIDMVYLTGYGFPLWRGGPMLYA 652
Query: 669 DAVGANYVYTSLKKWSQ 685
D VG V +++ ++Q
Sbjct: 653 DTVGLYNVERAMRGYAQ 669
>gi|167836289|ref|ZP_02463172.1| fatty oxidation complex, alpha subunit, putative [Burkholderia
thailandensis MSMB43]
Length = 694
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 258/675 (38%), Positives = 373/675 (55%), Gaps = 18/675 (2%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVN L + G+ + E A V AIVLTG G FSGG DI F
Sbjct: 9 DGVAVITLNNPPVNGLGLSTRLGVMEGLERAQRDPSVAAIVLTGAGRAFSGGADITEFNT 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + ++ V++ +E KP+V A+ G+A+GGGLELA+G H R+A+P Q+
Sbjct: 69 PKA------LQEPTLHTVIDAVEASGKPVVVAIHGVAMGGGLELALGAHYRVASPGAQIA 122
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 189
LPE+ LG++PG TQRLPR VGL A+ M++ + SE+ + GL DA+V + LL
Sbjct: 123 LPEVKLGLLPGAGGTQRLPRAVGLETALNMIVSGAPVPSEQLAQSGLFDALVEGD-LLDA 181
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
+ +A AA P R D+ A ++ AR AK A + P C+D IE
Sbjct: 182 AVAFARKAAAASGPHPRV---RDREIVHENAAGFIQFARNSAKAVAQHYPAPHKCIDAIE 238
Query: 250 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 309
G++ G G+ E F LV SR L H FF +RA SK+P+V R ++ VA
Sbjct: 239 AGVLQGFDKGLAFERDCFVALVQTPESRALRHAFFGERAASKIPDVP-ADTPAREIKAVA 297
Query: 310 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 369
VIG G MG GI + + V L E E L +G+ TI N V +GKLTQ+K +
Sbjct: 298 VIGAGTMGGGITMNFLNAGLPVTLLETKQEALDRGVATIRRNYDAQVKKGKLTQEKLDAR 357
Query: 370 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 429
+ +++ L Y + KD D+VIEAV E + +K+++F L++ P ILA+NTST+D+N +
Sbjct: 358 MALIRPTLAYDDLKDADLVIEAVFEELGVKEQVFRRLDEVAKPGAILASNTSTLDVNKIA 417
Query: 430 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 489
T ++G HFFSPA+VM LLE+VR ERT+ V+ +M + K I+K VV G C GF
Sbjct: 418 AFTKRPQDVVGMHFFSPANVMKLLEVVRGERTAKDVLATVMQLAKKIRKTAVVSGVCDGF 477
Query: 490 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDK 549
NR Y + A ++ G ++D AI FG +GPF++ DLAG + A K
Sbjct: 478 IGNRMVEQYIRQALFMLEEGALPAQVDRAIEKFGFAMGPFRMSDLAGNDIGWAIRKRRYV 537
Query: 550 AFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPG 609
PD + S + D L + GR G+ G G Y Y G + PS L ++E + G
Sbjct: 538 EQPDLHY-SKIADRLCEQGRFGQKTGAGWYDYVPGER-HAKPSKL--VDEMIVAYSNERG 593
Query: 610 GKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWAD 669
+ + + EIVE +++ +VNE ++LEE I +ASD+D + G FP +RGG + +AD
Sbjct: 594 LERREIGDDEIVERLVYALVNEGAKILEEKIASKASDIDMVYLAGYGFPLWRGGPMLYAD 653
Query: 670 AVGANYVYTSLKKWS 684
VG V +++ ++
Sbjct: 654 TVGLYNVERAMRGYA 668
>gi|337279644|ref|YP_004619116.1| 3-hydroxybutyryl-CoA epimerase [Ramlibacter tataouinensis TTB310]
gi|334730721|gb|AEG93097.1| 3-hydroxybutyryl-CoA epimerase-like protein [Ramlibacter
tataouinensis TTB310]
Length = 700
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 258/682 (37%), Positives = 372/682 (54%), Gaps = 30/682 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA+IT+ NPPVN L + L E+A + VKAIV+TG G FSGG DI F
Sbjct: 11 VAVITMNNPPVNGLGLATRVALTQGLEKANADGSVKAIVITGAGKAFSGGADIKEFGTPK 70
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
+ +L+ V+ +E+ KP+VAA+ +A+GGGLEL++GCH RIAAP + LP
Sbjct: 71 AVAEPNLLS------VILAMENSSKPVVAAIHSVAMGGGLELSLGCHYRIAAPGANIALP 124
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSE-----EGWKLGLIDAVVTSEEL 186
E+ LG+IPG TQRLPR++G+ A+ M++ + + SE G KL D + +S +
Sbjct: 125 EVKLGLIPGAGGTQRLPRVLGVETALNMIVSGEPVKSELLAQQPGQKL--FDKMASSAQA 182
Query: 187 LKVSRL-WALDIAARRK-PWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 244
L+ L +A +A R P +R+L G + AR K A N P C
Sbjct: 183 LQEEALAFARSVADTRPLPLVRNLPCKHPQGD-----AYFQFARNMVKGMAKNFPAPVKC 237
Query: 245 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRG 304
+D +E G+ E ++F L+ SR L H+F A+RA SK+P+V + R
Sbjct: 238 VDAVEFATRKKFDEGMTLEREIFTNLMFTPESRALRHIFMAERAASKIPDVPE-DTPQRE 296
Query: 305 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 364
++ VAVIG G MG GI+ + I V + E+ E L +GI TI N + +GKL QD
Sbjct: 297 IKAVAVIGAGTMGGGISMNFLNAGIPVTILEMKQEALDRGISTIRKNYEAQIKKGKLKQD 356
Query: 365 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 424
K + +LK LDY + D+VIEAV E + +KQK+F L+ ILA+NTST+D
Sbjct: 357 KYEQRMSLLKTTLDYQDLAQADLVIEAVFEEMGVKQKVFETLDGVMKKGAILASNTSTLD 416
Query: 425 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 484
+N + T ++G HFFSPA+VM LLE+VR +T+ V+ +M + K IKK VV G
Sbjct: 417 VNKIAAFTKRPQDVVGMHFFSPANVMKLLEVVRGGKTAKDVLATVMQLAKKIKKTAVVSG 476
Query: 485 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATS 544
C GF NR YS+ A L+ G ++D AI FG +GPF++ DLAG + A
Sbjct: 477 VCDGFIGNRMIEQYSRQAGFLLDEGATPQQVDKAIEKFGFAMGPFRMGDLAGNDIGWAIR 536
Query: 545 KEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVLPIIEECRRL 603
K D + S D L + GR G+ G G Y Y+ G + P V +I R+
Sbjct: 537 KRRATERADMKY-SRTADKLCELGRFGQKTGAGWYDYQAGKRDAIPSKLVEDMIAAHRKE 595
Query: 604 SNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGG 663
I +P ++++EIV+ +++ +VNE +LEEGI RASD+D + G FP +RGG
Sbjct: 596 LGI----EPRKISDEEIVQRLVYALVNEGAHILEEGIASRASDIDMVYLTGYGFPIHRGG 651
Query: 664 IVFWADAVGANYVYTSLKKWSQ 685
+ +AD VG V ++K++ Q
Sbjct: 652 PMLYADQVGLFNVMQAMKRFQQ 673
>gi|424903808|ref|ZP_18327321.1| fatty oxidation complex, alpha subunit, putative [Burkholderia
thailandensis MSMB43]
gi|390931681|gb|EIP89082.1| fatty oxidation complex, alpha subunit, putative [Burkholderia
thailandensis MSMB43]
Length = 692
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 258/675 (38%), Positives = 373/675 (55%), Gaps = 18/675 (2%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVN L + G+ + E A V AIVLTG G FSGG DI F
Sbjct: 7 DGVAVITLNNPPVNGLGLSTRLGVMEGLERAQRDPSVAAIVLTGAGRAFSGGADITEFNT 66
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + ++ V++ +E KP+V A+ G+A+GGGLELA+G H R+A+P Q+
Sbjct: 67 PKA------LQEPTLHTVIDAVEASGKPVVVAIHGVAMGGGLELALGAHYRVASPGAQIA 120
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 189
LPE+ LG++PG TQRLPR VGL A+ M++ + SE+ + GL DA+V + LL
Sbjct: 121 LPEVKLGLLPGAGGTQRLPRAVGLETALNMIVSGAPVPSEQLAQSGLFDALVEGD-LLDA 179
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
+ +A AA P R D+ A ++ AR AK A + P C+D IE
Sbjct: 180 AVAFARKAAAASGPHPRV---RDREIVHENAAGFIQFARNSAKAVAQHYPAPHKCIDAIE 236
Query: 250 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 309
G++ G G+ E F LV SR L H FF +RA SK+P+V R ++ VA
Sbjct: 237 AGVLQGFDKGLAFERDCFVALVQTPESRALRHAFFGERAASKIPDVP-ADTPAREIKAVA 295
Query: 310 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 369
VIG G MG GI + + V L E E L +G+ TI N V +GKLTQ+K +
Sbjct: 296 VIGAGTMGGGITMNFLNAGLPVTLLETKQEALDRGVATIRRNYDAQVKKGKLTQEKLDAR 355
Query: 370 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 429
+ +++ L Y + KD D+VIEAV E + +K+++F L++ P ILA+NTST+D+N +
Sbjct: 356 MALIRPTLAYDDLKDADLVIEAVFEELGVKEQVFRRLDEVAKPGAILASNTSTLDVNKIA 415
Query: 430 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 489
T ++G HFFSPA+VM LLE+VR ERT+ V+ +M + K I+K VV G C GF
Sbjct: 416 AFTKRPQDVVGMHFFSPANVMKLLEVVRGERTAKDVLATVMQLAKKIRKTAVVSGVCDGF 475
Query: 490 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDK 549
NR Y + A ++ G ++D AI FG +GPF++ DLAG + A K
Sbjct: 476 IGNRMVEQYIRQALFMLEEGALPAQVDRAIEKFGFAMGPFRMSDLAGNDIGWAIRKRRYV 535
Query: 550 AFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPG 609
PD + S + D L + GR G+ G G Y Y G + PS L ++E + G
Sbjct: 536 EQPDLHY-SKIADRLCEQGRFGQKTGAGWYDYVPGER-HAKPSKL--VDEMIVAYSNERG 591
Query: 610 GKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWAD 669
+ + + EIVE +++ +VNE ++LEE I +ASD+D + G FP +RGG + +AD
Sbjct: 592 LERREIGDDEIVERLVYALVNEGAKILEEKIASKASDIDMVYLAGYGFPLWRGGPMLYAD 651
Query: 670 AVGANYVYTSLKKWS 684
VG V +++ ++
Sbjct: 652 TVGLYNVERAMRGYA 666
>gi|410641551|ref|ZP_11352071.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola chathamensis S18K6]
gi|410645290|ref|ZP_11355757.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola agarilytica NO2]
gi|410135220|dbj|GAC04156.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola agarilytica NO2]
gi|410139084|dbj|GAC10258.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola chathamensis S18K6]
Length = 702
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 261/704 (37%), Positives = 391/704 (55%), Gaps = 36/704 (5%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA++ + +PPVNAL+ + GL + +A D V AIV++ FSGG DI+ F +
Sbjct: 13 VAVLYMQSPPVNALSKSVRVGLIENINQALDNDQVDAIVISSKLALFSGGADISEFSGGN 72
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
L P + V+++IE+ KP++A + G A GGGLE+A+ CH R+ ++GLP
Sbjct: 73 ------LEPHLPT--VLDVIENASKPVIAVLNGPAFGGGLEVALSCHYRVTFASNKVGLP 124
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKL-GLIDAVVTS-EELLKV 189
E+ LG++PG TQRLPRL G++KA++M++ S E+ KL G+ D VV LL
Sbjct: 125 EVNLGILPGAGGTQRLPRLAGVAKALDMIV---SGRPEKASKLDGVFDLVVEDPTNLLSE 181
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
+ D+ A +R + + S E+ R KK A + C+ +E
Sbjct: 182 GMAFVQDVIAN-GAKVRKTSDVE-IDKASAPDELFAQYRQGLKKQARGFFAPERCIQAVE 239
Query: 250 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 309
+ G+++E ++F E + +R H FFA+RA + V + D R ++KV
Sbjct: 240 ASVALPFEQGLVREGELFMECMASKEARAQQHFFFAERAAAHVSDY-DKSTPTRDIKKVG 298
Query: 310 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 369
+IG G MG GIA I VV+ E+ E L KG+ I N +GKLTQ +
Sbjct: 299 IIGAGTMGGGIAMNFANAGIPVVMLELKQEALDKGLALIRKNYENSAKKGKLTQQAVEDR 358
Query: 370 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 429
+ +L+G +Y DVD+VIEAV E + +K+++F L+K C P ILA+NTST+D+N +
Sbjct: 359 MALLQGSTEYEALSDVDLVIEAVFEKMSVKKEVFGALDKVCKPGAILASNTSTLDVNEIA 418
Query: 430 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 489
TS + +IG HFFSPA+VM LLE+V+ E+TS +VI M + K I KV V+VG C GF
Sbjct: 419 ASTSRPEDVIGLHFFSPANVMKLLEVVKAEKTSPEVIKTSMQMAKKINKVAVLVGVCFGF 478
Query: 490 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAA---ATSKE 546
NR PY + A L+ G ++D I FGLP+GPF + D+AG + + +E
Sbjct: 479 VGNRMIEPYGREAARLMLEGATPQQVDKVIYDFGLPMGPFTMGDMAGLDIGYYVRESRRE 538
Query: 547 FDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPII-EECRRLS 604
F P S D L+K GR G +G+G Y YE G++ P PDP V+ + EE RL
Sbjct: 539 FIAHDPSYCVVS---DRLVKQGRVGLKSGRGAYMYEPGNRMPIPDPEVVEMAKEEAERL- 594
Query: 605 NIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGI 664
G + ++++EI+E I+FP++NE +LEEGI ++SD+D V G FP YRGG
Sbjct: 595 ----GIEQRDISDQEILERIIFPLINEGALILEEGIAAKSSDIDVIYVYGYGFPVYRGGP 650
Query: 665 VFWADAVGANYVYTSLKKWSQLYGNF----FKPSRFLEERATKG 704
+ +AD +G VY ++ K+ G + F+P+ L++ A +G
Sbjct: 651 MQYADEIGLKNVYEAMCKYRDELGEYGSHWFEPAPLLKQLAEQG 694
>gi|319762270|ref|YP_004126207.1| 3-hydroxyacyl-CoA dehydrogenase [Alicycliphilus denitrificans BC]
gi|330825800|ref|YP_004389103.1| 3-hydroxybutyryl-CoA epimerase [Alicycliphilus denitrificans K601]
gi|317116831|gb|ADU99319.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Alicycliphilus
denitrificans BC]
gi|329311172|gb|AEB85587.1| 3-hydroxybutyryl-CoA epimerase [Alicycliphilus denitrificans K601]
Length = 699
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 264/682 (38%), Positives = 382/682 (56%), Gaps = 30/682 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA+ITL NPPVN L + G+ D E A + VKAIV+TG GG FSGG DI F
Sbjct: 11 VAVITLNNPPVNGLGLDTRRGIVDGLERAQADAAVKAIVVTGAGGAFSGGADIKEF---- 66
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G + + ++ V++ +E+C KP+VAA+ G+ +GGGLELA+GCH RIAAP + LP
Sbjct: 67 --GTEKSLQEPNLHSVISAVENCAKPVVAAIHGVCMGGGLELALGCHYRIAAPGCSVALP 124
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSE-----EGWKLGLIDAVVTSEEL 186
E+ LG++PG TQRLPR+VG+ A+ M++ + + SE G KL D + S E
Sbjct: 125 EVKLGLLPGAGGTQRLPRVVGVEAALNMIVSGEPVKSEFIGAVPGQKL--FDRMAASPES 182
Query: 187 LKVSRL-WALDIA-ARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 244
L L +A +A AR P +R+L E + AR K A N P C
Sbjct: 183 LPEEALAFARSVAEARPLPLVRNLPCKH-----PEGDAYFQFARNMVKGMAKNFPAPAKC 237
Query: 245 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRG 304
+D +E G+ E ++F L+ SR L H+FFA+RA SK+P+V K R
Sbjct: 238 VDAVEAATRRKFADGLQYERELFINLMWTPESRALRHLFFAERAASKIPDVPSDTPK-RD 296
Query: 305 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 364
++KV VIG G MG GI+ + I V + E+ E L +GI TI N V +GKL +D
Sbjct: 297 IKKVGVIGAGTMGGGISMNFLNAGIPVTILEMKQEALDRGIATIRKNYEAQVKKGKLKED 356
Query: 365 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 424
K + +L L Y + KD D++IEAV E + +K+ +F +L++ P ILA+NTST+D
Sbjct: 357 KYQQRMALLSTTLSYDDLKDCDLIIEAVFEELGVKEAVFRQLDQVAKPGAILASNTSTLD 416
Query: 425 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 484
++ + T ++G HFFSPA+VM LLE+VR + T+ V+ +M + K I+K VV G
Sbjct: 417 VDRIAAFTRRPQDVVGMHFFSPANVMKLLEVVRGKATAKDVLATVMAIAKKIRKTAVVSG 476
Query: 485 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATS 544
C GF NR YSQ A L+ G ++D AI FG +GPF++ DLAG + A
Sbjct: 477 VCDGFIGNRMIERYSQQAGFLLDEGCTPSQVDKAIERFGFAMGPFRMGDLAGNDIGWAIR 536
Query: 545 KEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVLPIIEECRRL 603
K PD + S DLL + GR G+ G G Y Y G + P P V ++EE R+
Sbjct: 537 KRRYVEKPDMKY-SKTADLLCEMGRFGQKTGAGWYDYAPGKRDAIPSPMVEKMVEEHRKA 595
Query: 604 SNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGG 663
I P ++++EIV+ +++ +VNE ++LEEGI +A D+D + G FP +RGG
Sbjct: 596 LGIAPR----KISDEEIVQRLVYSLVNEGAKILEEGIASKAGDIDMVYLTGYGFPIHRGG 651
Query: 664 IVFWADAVGANYVYTSLKKWSQ 685
+ +A VG V ++K++++
Sbjct: 652 PMHYASEVGLFNVVQAMKRFAR 673
>gi|407713391|ref|YP_006833956.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia phenoliruptrix
BR3459a]
gi|407235575|gb|AFT85774.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia phenoliruptrix
BR3459a]
Length = 692
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 251/678 (37%), Positives = 371/678 (54%), Gaps = 22/678 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+DGVA+ITL NPPVN L + AG+ + E A ++AIVLTG G FSGG DI F
Sbjct: 6 HDGVAVITLNNPPVNGLGLSTRAGIVEGIERAQRDPAIRAIVLTGAGKAFSGGADITEFN 65
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ +L V+ ++E KP+VAA+ +A+GGGLELA+G H RIAAP Q+
Sbjct: 66 TPKATQEPTLA------TVIKIVEGSAKPVVAAIHSVAMGGGLELALGAHYRIAAPGAQI 119
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
LPE+ LG++PG TQRLPR +GL A+ M++ + S++ GL D +V + L +
Sbjct: 120 ALPEVKLGILPGAGGTQRLPRAIGLEAALNMIVSGAPVDSQKLAGSGLFDELVEGD-LAE 178
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 248
+ +A + A+ P + R A ++ AR A + P C+D +
Sbjct: 179 AALAFARKVGAQAGPHPKVRERKI---DHPNAEGFIQFARNSVAAVAKHFPAPLKCIDAV 235
Query: 249 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRK 307
E G+ HG G+ E + F LV SR L H FF +RA SK+P+V D + R +R+
Sbjct: 236 EAGVKHGFDKGLAFERECFVALVQTPESRALRHAFFGERAASKIPDVPADTPV--REIRR 293
Query: 308 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 367
VAVIG G MG GIA + I V L E E L +G+ TI N V +GKL
Sbjct: 294 VAVIGAGTMGGGIAMNFVNAGIPVTLLETKQEALQRGLATIRGNYEASVKKGKLKAGALE 353
Query: 368 NALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 427
+ ++ L Y + KD D+++EAV E + +K+++F L++ P ILA+NTST+D+N
Sbjct: 354 ARMALITPTLSYDDLKDADLIVEAVFEELGVKEQVFRRLDEIAKPGAILASNTSTLDVNR 413
Query: 428 VGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 487
+ T ++G HFFSPA+VM LLE+VR T+ V+ +M + K I+K VV G C
Sbjct: 414 IAAFTKRPQDVVGMHFFSPANVMKLLEVVRGRETAKDVLATVMKLAKQIRKTAVVSGVCD 473
Query: 488 GFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEF 547
GF NR Y + A ++ G ++D AI FG +GPF++ DLAG + A K
Sbjct: 474 GFIGNRMIEQYIRQALFMLEEGALPAQVDRAIEKFGFAMGPFRMSDLAGNDIGWAIRKRR 533
Query: 548 DKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNI 606
+ PD + S + D L ++GR G+ G G Y Y G + +P V +I + N
Sbjct: 534 YQEQPDLHY-SKIADRLCETGRFGQKTGGGWYDYVAGERTARPSKLVDDMIVAYSKEVN- 591
Query: 607 MPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVF 666
+ + + EIVE ++F +VNE ++LEEGI +ASD+D + G FP +RGG +
Sbjct: 592 ---AERRKIGDDEIVERLVFALVNEGAKILEEGIASKASDIDMVYLTGYGFPLHRGGPML 648
Query: 667 WADAVGANYVYTSLKKWS 684
+AD VG V ++++++
Sbjct: 649 YADTVGLYNVERAIRRYA 666
>gi|339325689|ref|YP_004685382.1| enoyl-CoA hydratase FadB [Cupriavidus necator N-1]
gi|338165846|gb|AEI76901.1| enoyl-CoA hydratase FadB [Cupriavidus necator N-1]
Length = 693
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 263/700 (37%), Positives = 384/700 (54%), Gaps = 26/700 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DGVA+ITL NPPVN L G+ + A +KAIV+TG G FSGG DI F
Sbjct: 8 QDGVAVITLDNPPVNGLGHSTRLGIVEGMTRALDDAAIKAIVITGAGKAFSGGADIREFN 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
M + ++ V+ ++E KP+VAAV +A+GGGLELA+GC+ R+A+ Q+
Sbjct: 68 TPKA------MQEPTLHSVIRVLEGSSKPVVAAVHSVAMGGGLELALGCNYRVASKGAQI 121
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
LPE+ LG++PG TQRLPR++GL A M++ + SE+ L D +V + +L
Sbjct: 122 ALPEVKLGLLPGAGGTQRLPRVIGLEAAANMIVSGTPVLSEKFAGTKLFDEIVDGD-VLP 180
Query: 189 VSRLWALDI--AARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLD 246
+ +A ++ AA P +R L + L AR A N P CL+
Sbjct: 181 AAVKFAQNVGAAAGPHPKVRDLKVRHE-----NPEGYLGFARNTVAAMAKNFPAPLKCLE 235
Query: 247 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 306
+ G + G+ +E + F LV SR L H FF +RA SK+P+V + G R +
Sbjct: 236 AVA-GSLKPFEQGLKEEREGFLFLVTTPESRALRHAFFGERAASKIPDVPE-GTPTRKIE 293
Query: 307 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 366
KVAVIG G MG GI+ + I V + E E L +G+ TI N +GKLTQ+K
Sbjct: 294 KVAVIGAGTMGGGISMNFLNAGIPVTILETKQEALDRGVATIRKNYENSAKKGKLTQEKV 353
Query: 367 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 426
+ +L L Y + KD D++IEAV E + +K+ +F +L++ ILA+NTST+D+N
Sbjct: 354 EQRMGLLSTTLSYDDLKDADLIIEAVFEEMGVKETVFKKLDEVAKQGAILASNTSTLDVN 413
Query: 427 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 486
+ T ++G HFFSPA+VM LLE+VR E+T V+ +M +GK IKK VV G C
Sbjct: 414 KIASFTKRPQDVVGMHFFSPANVMKLLEVVRGEKTGKDVLATVMQIGKKIKKTAVVSGVC 473
Query: 487 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKE 546
GF NR YS+ A L+ G ++D AI FG +GPF++ DLAG + A K
Sbjct: 474 DGFIGNRMIEQYSRQAGYLLDEGALPEQVDKAIEKFGFAMGPFRMGDLAGNDIGWAIRKR 533
Query: 547 FDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGS-KPKPDPSVLPIIEECRRLSN 605
PD + S DLL + GR G+ G G Y Y+ G KP P+ V +I + +
Sbjct: 534 RAVDKPDIQY-SKTADLLCEMGRFGQKTGAGWYDYKAGDRKPYPNQQVNDMIVQHSKDLG 592
Query: 606 IMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIV 665
I ++++EIVE ++F +VNE ++LEEGI +ASD+D + G FP +RGG +
Sbjct: 593 IT----RRKISDEEIVERLVFALVNEGAKILEEGIASKASDIDMVYLTGYGFPLFRGGPM 648
Query: 666 FWADAVGANYVYTSLKKWSQLY-GNFFKPSRFLEERATKG 704
+AD VG V S+K++++ Y G ++ + L++ A +G
Sbjct: 649 LYADQVGLYNVALSMKRYAKGYHGEAWQVAPLLQKLADEG 688
>gi|83721623|ref|YP_442663.1| fatty oxidation complex subunit alpha [Burkholderia thailandensis
E264]
gi|167619716|ref|ZP_02388347.1| fatty oxidation complex, alpha subunit, putative [Burkholderia
thailandensis Bt4]
gi|257138876|ref|ZP_05587138.1| fatty oxidation complex, alpha subunit, putative [Burkholderia
thailandensis E264]
gi|83655448|gb|ABC39511.1| fatty oxidation complex, alpha subunit, putative [Burkholderia
thailandensis E264]
Length = 694
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 255/677 (37%), Positives = 373/677 (55%), Gaps = 20/677 (2%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVN L + G+ + E A + AIVL G G FSGG DI F
Sbjct: 9 DGVAVITLNNPPVNGLGLSTRLGIMEGLERAQRDPAIAAIVLAGAGRAFSGGADITEFNT 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + ++ V++ +E KP+V A+ +A+GGGLELA+G H R+A+P Q+
Sbjct: 69 PKA------LQEPTLHTVIDAVEASGKPVVVAIHSVAMGGGLELALGAHYRVASPGAQIA 122
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 189
LPE+ LG++PG TQRLPR VGL A+ M++ + SE+ K GL DA V + LL
Sbjct: 123 LPEVKLGLLPGAGGTQRLPRAVGLETALNMIVSGAPVPSEQLAKSGLFDAFVEGD-LLDA 181
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
+ +A A P R D+ A ++ AR K A + P C+D IE
Sbjct: 182 AVAFARKAGAASGPHPRV---RDREIVHDNAAGFIQFARNSVKAVAQHYPAPHKCIDAIE 238
Query: 250 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKV 308
G++ G G+ E F LV SR L H FF +RA SK+P+V D + R ++ V
Sbjct: 239 AGVLQGFGKGLAFERDCFVALVQTPESRALRHAFFGERAASKIPDVPADTPV--REIKSV 296
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
AVIG G MG GIA + + V L E E L +G+ TI N V +GKLTQ+K +
Sbjct: 297 AVIGAGTMGGGIAMNFLNAGLPVTLLETKQEALDRGLATIRRNYDAQVKKGKLTQEKLDA 356
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
+ +++ L Y + KD D+VIEAV E + +K+++F L++ P ILA+NTST+D+N +
Sbjct: 357 RMALIRPTLAYDDLKDADLVIEAVFEELGVKEQVFRRLDEVAKPGAILASNTSTLDVNKI 416
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
T ++G HFFSPA+VM LLE+VR +T+ V+ +M + K I+K VV G C G
Sbjct: 417 AAFTKRPQDVVGMHFFSPANVMKLLEVVRGGQTAKDVLATVMQLAKKIRKTAVVSGVCDG 476
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR Y + A ++ G ++D AI +FG +GPF++ DLAG + A K
Sbjct: 477 FIGNRMVEQYIRQALFMLEEGALPAQVDRAIETFGFAMGPFRMSDLAGNDIGWAIRKRRY 536
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMP 608
PD + S + D L + GR G+ G G Y Y G + + PS L ++E +
Sbjct: 537 VEQPDLHY-SKIADRLCEQGRFGQKTGAGWYDYVPGER-RAKPSKL--VDEMIVAYSSER 592
Query: 609 GGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWA 668
G + + + EIVE +++ +VNE ++LEE I +ASD+D + G FP +RGG + +A
Sbjct: 593 GLERREIGDDEIVERLVYSLVNEGAKILEEKIASKASDIDMVYLTGYGFPLWRGGPMLYA 652
Query: 669 DAVGANYVYTSLKKWSQ 685
D VG V +++ ++Q
Sbjct: 653 DTVGLYNVERAMRGYAQ 669
>gi|91783541|ref|YP_558747.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Burkholderia xenovorans LB400]
gi|91687495|gb|ABE30695.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Burkholderia xenovorans LB400]
Length = 694
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 250/678 (36%), Positives = 376/678 (55%), Gaps = 22/678 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+DGVA+ITL NPPVN L + AG+ + E A + ++AIVLTG G FSGG DI F
Sbjct: 8 HDGVAVITLNNPPVNGLGLSTRAGIVEGIERAQNDPGIEAIVLTGAGKAFSGGADITEFN 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ +L V+ ++E KP+VAA+ +A+GGGLELA+G H R+AAP Q+
Sbjct: 68 TPKATQEPTLA------TVIKIVEGSAKPVVAAIHSVAMGGGLELALGAHYRVAAPGAQI 121
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
LPE+ LG++PG TQRLPR +GL A+ M++ + SE+ GL D + + L +
Sbjct: 122 ALPEVKLGILPGAGGTQRLPRAIGLEAALNMIVSGTPVMSEKLADSGLFDELAQGD-LAE 180
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 248
+ +A + A+ P + D+ A ++ AR A + P C+D +
Sbjct: 181 AALAFARKVGAKEGPHPK---LRDRRIEHPNAAGFIQFARNSVAAVAKHFPAPHKCIDAV 237
Query: 249 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRK 307
E G+ +G G+ E + F LV SR L H FF +RA SK+P+V +D + R + +
Sbjct: 238 EAGVQNGFDKGLAFERECFIALVQTPESRALRHAFFGERAASKIPDVPSDTPV--RDINQ 295
Query: 308 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 367
VAVIG G MG GIA I I V L E E L +G+ TI N V +GKL +
Sbjct: 296 VAVIGAGTMGGGIAMNFINAGIPVTLLETRQEALDRGLATIRKNYEASVRKGKLKPEALE 355
Query: 368 NALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 427
+ ++ L Y + K+ D+++EAV E + +K+++F L++ ILA+NTST+D++
Sbjct: 356 QRMALITPTLSYDDLKNADLIVEAVFEELDVKEQVFRRLDEVAKQGAILASNTSTLDVDR 415
Query: 428 VGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 487
+ T ++G HFFSPA+VM LLE+VR T+ V+ +M + K I+K VV G C
Sbjct: 416 IAAFTKRPQDVVGMHFFSPANVMKLLEVVRGRETAKDVLATVMKLAKKIRKTAVVSGVCD 475
Query: 488 GFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEF 547
GF NR Y + A ++ G ++D AI FG +GPF++ DLAG + A K
Sbjct: 476 GFIGNRMIEQYIRQALFMLEEGALPAQVDRAIEKFGFAMGPFRMSDLAGNDIGWAIRKRR 535
Query: 548 DKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVLPIIEECRRLSNI 606
+ PD + S + D L ++GR G+ G G Y Y+ G + P V +I + +N
Sbjct: 536 YQEHPDMHY-SKIADRLCETGRFGQKTGGGWYDYKAGDRTAYPSKVVDDMIVAFSKEAN- 593
Query: 607 MPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVF 666
G + IS ++EIVE ++F +VNE ++LEEGI +ASD+D + G FP YRGG +
Sbjct: 594 -AGRRKIS--DEEIVERLVFSLVNEGAKILEEGIASKASDIDMVYLAGYGFPLYRGGPML 650
Query: 667 WADAVGANYVYTSLKKWS 684
+AD VG V ++++++
Sbjct: 651 YADTVGLYNVERAIRRYA 668
>gi|332306389|ref|YP_004434240.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Glaciecola sp.
4H-3-7+YE-5]
gi|332173718|gb|AEE22972.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Glaciecola sp.
4H-3-7+YE-5]
Length = 702
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 260/704 (36%), Positives = 391/704 (55%), Gaps = 36/704 (5%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA++ + +PPVNAL+ + GL + +A D + AIV++ FSGG DI+ F +
Sbjct: 13 VAVLYMQSPPVNALSKSVRVGLIENINQALDNDQIDAIVISSKLALFSGGADISEFSGGN 72
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
L P + V+++IE+ KP++A + G A GGGLE+A+ CH R+ ++GLP
Sbjct: 73 ------LEPHLPT--VLDVIENASKPVIAVLNGPAFGGGLEVALSCHYRVTFASNKVGLP 124
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKL-GLIDAVVTS-EELLKV 189
E+ LG++PG TQRLPRL G++KA++M++ S E+ KL G+ D VV LL
Sbjct: 125 EVNLGILPGAGGTQRLPRLSGVAKALDMIV---SGRPEKASKLDGVFDLVVEDPTNLLSE 181
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
+ D+ A +R + + S E+ R KK A + C+ +E
Sbjct: 182 GMAFVQDVIAN-GAKVRKTSDVE-IDKASAPDELFAQYRQGLKKQARGFFAPERCIQAVE 239
Query: 250 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 309
+ G+++E ++F E + +R H FFA+RA + V + D R ++KV
Sbjct: 240 ASVALPFEQGLVREGELFMECMASKEARAQQHFFFAERAAAHVSDY-DKSTPTRDIKKVG 298
Query: 310 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 369
+IG G MG GIA I VV+ E+ E L KG+ I N +GKLTQ +
Sbjct: 299 IIGAGTMGGGIAMNFANAGIPVVMLELKQEALDKGLALIRKNYENSAKKGKLTQQAVEDR 358
Query: 370 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 429
+ +L+G +Y DVD+VIEAV E + +K+++F L+K C P ILA+NTST+D+N +
Sbjct: 359 MALLQGSTEYEALSDVDLVIEAVFEKMSVKKEVFGALDKVCKPGAILASNTSTLDVNEIA 418
Query: 430 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 489
TS + +IG HFFSPA+VM LLE+V+ E+TS +VI M + K I KV V+VG C GF
Sbjct: 419 ASTSRPEDVIGLHFFSPANVMKLLEVVKAEKTSPEVIKTSMQMAKKINKVAVLVGVCFGF 478
Query: 490 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAA---ATSKE 546
NR PY + A L+ G ++D I FGLP+GPF + D+AG + + +E
Sbjct: 479 VGNRMIEPYGREAARLMLEGATPQQVDKVIYDFGLPMGPFTMGDMAGLDIGYYVRESRRE 538
Query: 547 FDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPII-EECRRLS 604
F P S D L+K GR G +G+G Y YE G++ P PDP V+ + EE RL
Sbjct: 539 FIAHDPSYCVVS---DRLVKQGRVGLKSGRGAYMYEPGNRMPIPDPEVVEMAKEEAERL- 594
Query: 605 NIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGI 664
G + ++++EI+E I+FP++NE +LEEGI ++SD+D V G FP YRGG
Sbjct: 595 ----GIEQRDISDQEILERIIFPLINEGALILEEGIAAKSSDIDVIYVYGYGFPVYRGGP 650
Query: 665 VFWADAVGANYVYTSLKKWSQLYGNF----FKPSRFLEERATKG 704
+ +AD +G VY ++ K+ G + F+P+ L++ A +G
Sbjct: 651 MQYADEIGLKKVYEAMCKYRDELGEYGSHWFEPAPLLKQLAEQG 694
>gi|167581600|ref|ZP_02374474.1| fatty oxidation complex, alpha subunit, putative [Burkholderia
thailandensis TXDOH]
Length = 694
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 255/677 (37%), Positives = 373/677 (55%), Gaps = 20/677 (2%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVN L + G+ + E A + AIVL G G FSGG DI F
Sbjct: 9 DGVAVITLNNPPVNGLGLSTRLGIMEGLERAQRDPAIAAIVLAGAGRAFSGGADITEFNT 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + ++ V++ +E KP+V A+ +A+GGGLELA+G H R+A+P Q+
Sbjct: 69 PKA------LQEPTLHTVIDAVEASGKPVVVAIHSVAMGGGLELALGAHYRVASPGAQIA 122
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 189
LPE+ LG++PG TQRLPR VGL A+ M++ + SE+ K GL DA V + LL
Sbjct: 123 LPEVKLGLLPGAGGTQRLPRAVGLETALNMIVSGAPVPSEQLAKSGLFDAFVEGD-LLDA 181
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
+ +A A P R D+ A ++ AR K A + P C+D IE
Sbjct: 182 AVAFARKAGAASGPHPRV---RDREIVHDNAAGFIQFARNSVKAVAQHYPAPHKCIDAIE 238
Query: 250 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKV 308
G++ G G+ E F LV SR L H FF +RA SK+P+V D + R ++ V
Sbjct: 239 AGVLQGFDKGLAFERDCFVALVQTPESRALRHAFFGERAASKIPDVPADTPV--REIKSV 296
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
AVIG G MG GIA + + V L E E L +G+ TI N V +GKLTQ+K +
Sbjct: 297 AVIGAGTMGGGIAMNFLNAGLPVTLLETKQEALDRGLATIRRNYDAQVKKGKLTQEKLDA 356
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
+ +++ L Y + KD D+VIEAV E + +K+++F L++ P ILA+NTST+D+N +
Sbjct: 357 RMALIRPTLAYDDLKDADLVIEAVFEELGVKEQVFRRLDEVAKPGAILASNTSTLDVNKI 416
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
T ++G HFFSPA+VM LLE+VR +T+ V+ +M + K I+K VV G C G
Sbjct: 417 AAFTKRPQDVVGMHFFSPANVMKLLEVVRGGQTAKDVLATVMQLAKKIRKTAVVSGVCDG 476
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR Y + A ++ G ++D AI +FG +GPF++ DLAG + A K
Sbjct: 477 FIGNRMVEQYIRQALFMLEEGALPAQVDRAIENFGFAMGPFRMSDLAGNDIGWAIRKRRY 536
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMP 608
PD + S + D L + GR G+ G G Y Y G + + PS L ++E +
Sbjct: 537 VEQPDLHY-SKIADRLCEQGRFGQKTGAGWYDYVPGER-RAKPSKL--VDEMIVAYSSER 592
Query: 609 GGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWA 668
G + + + EIVE +++ +VNE ++LEE I +ASD+D + G FP +RGG + +A
Sbjct: 593 GLERREIGDDEIVERLVYALVNEGAKILEEKIASKASDIDMVYLTGYGFPLWRGGPMLYA 652
Query: 669 DAVGANYVYTSLKKWSQ 685
D VG V +++ ++Q
Sbjct: 653 DTVGLYNVERAMRGYAQ 669
>gi|393776994|ref|ZP_10365288.1| 3-hydroxybutyryl-CoA epimerase [Ralstonia sp. PBA]
gi|392716351|gb|EIZ03931.1| 3-hydroxybutyryl-CoA epimerase [Ralstonia sp. PBA]
Length = 698
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 266/711 (37%), Positives = 386/711 (54%), Gaps = 35/711 (4%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DGVAIITL NPPVN L + G+ + + A + V+AIVLTG G FSGG DI F
Sbjct: 8 QDGVAIITLANPPVNGLGLATRQGIMEGLQRAAADASVRAIVLTGAGKAFSGGADIREF- 66
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
G + + + V+ IE KP+VAAV +A+GGGLELA+GCH R+AAP Q+
Sbjct: 67 -----GTSKALEEPILVSVIAAIEHSPKPVVAAVHSVAMGGGLELALGCHYRLAAPGAQI 121
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEE--- 185
LPE+ LG++PG TQRLPR+ GL A++M+ + SE+ D +V S +
Sbjct: 122 ALPEVKLGIMPGAGGTQRLPRVAGLEAALDMITTGAVVRSEQLAGTRTFDRIVESSQPAD 181
Query: 186 LLKVSRLWALDIAARR--KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQA 243
LL + +A ++ R P +R L+ +A L AR + + P
Sbjct: 182 LLAEAVAFAREVGTRPGPHPLVRDLNI-----EAPDAEGRLAAARAAIAARSAHFPAPLK 236
Query: 244 CLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK---VPNVTDIGL 300
C++ +E + +G+ E + F L+ SR L H FF +RA K VP+ T +
Sbjct: 237 CIEALEAAVRLPFEAGLKVEREAFLFLLTTPESRALRHAFFGERAAGKIADVPSATPV-- 294
Query: 301 KPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGK 360
R + KVAVIG G MG+GIA + + V L E E L +G+ TI N V +GK
Sbjct: 295 --RDIHKVAVIGAGTMGAGIAMTFLSAGLPVTLLEARQEALERGVATIRKNYDSTVRKGK 352
Query: 361 LTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 420
L+++KA A+ +L+ LDY+ D D+VIEAV E + +K+ +F +L+ P ILA+NT
Sbjct: 353 LSEEKAERAMALLQTTLDYAAIADADLVIEAVFEDMGVKETVFRQLDAVMKPGAILASNT 412
Query: 421 STIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVP 480
ST+DLN + T+ ++G HFFSPA+VM LLE+VR +T V+ +M + K ++K
Sbjct: 413 STLDLNAIAGFTTRPQDVVGLHFFSPANVMKLLEVVRGAQTGKDVLATVMKLAKTLRKTA 472
Query: 481 VVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVA 540
VV G C GF NR Y + A L+ G +IDSAI FG +GPF++ DLAG +
Sbjct: 473 VVSGVCDGFIGNRMVEQYVRQAGFLLDEGCTPQQIDSAIERFGFAMGPFRMCDLAGNDIW 532
Query: 541 AATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEE 599
A + PD ++ S D L GR G+ G G Y Y G + P P V ++ +
Sbjct: 533 QAIRTRKLQEHPDLAY-STTADQLCALGRFGQKTGAGWYDYVPGDRTAHPSPVVAGLLAK 591
Query: 600 CRRLSNIMPGGKPI-SVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFP 658
++ G P V+++EIVE +++ +VNE +LEEGI +ASD+D + G FP
Sbjct: 592 -----HVAASGVPQRQVSDEEIVERLVYALVNEGAAILEEGIAAKASDIDMVYLTGYGFP 646
Query: 659 SYRGGIVFWADAVGANYVYTSLKKWSQLY-GNFFKPSRFLEERATKGIPLS 708
+RGG + +AD VG + V ++ +S Y G +KP+ L A G L+
Sbjct: 647 LHRGGPMLYADMVGLDKVLARMQSFSTGYHGELWKPAPLLVRLAAAGKGLT 697
>gi|238026993|ref|YP_002911224.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Burkholderia glumae
BGR1]
gi|237876187|gb|ACR28520.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Burkholderia glumae
BGR1]
Length = 694
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 251/676 (37%), Positives = 376/676 (55%), Gaps = 20/676 (2%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA++TL NPPVN L A L + A + V AIVLTG G FSGG DI F
Sbjct: 9 DGVAVLTLDNPPVNGLGHSTRAALMAGLDRALADASVTAIVLTGAGRAFSGGADITEFNT 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + ++ ++ +E KP++AAV + +GGGLELA+G H RIAAP TQ+
Sbjct: 69 PKA------LQEPNLHTLIAAVEASPKPVIAAVHAVVMGGGLELALGAHYRIAAPGTQVA 122
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 189
LPE+ +G++PG TQRLPR VGL A+ M++ + +E+ GL D + + LL
Sbjct: 123 LPEVKIGLLPGAGGTQRLPRAVGLETALNMIVSGAPVPAEQLAASGLFDEIAAGD-LLDA 181
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
+ + + A+ P R D+ ++ AR K AP P C+D IE
Sbjct: 182 AVAFGRRVGAQPGPHPRV---RDRAIVHPNPAGFIQFARNSVKAAAPQYPAPHKCIDAIE 238
Query: 250 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKV 308
G+++G G+ E + F LV SR L H FFA+RA SK+P+V D + R +R+V
Sbjct: 239 SGVLNGFEQGLADEREGFVALVQTPESRALRHAFFAERAASKIPDVPADTPV--REIRRV 296
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
AVIG G MG GIA + + VVL E E L +G+ TI N V +GKLT +K
Sbjct: 297 AVIGAGTMGGGIAMNFVNAGLPVVLLETKQEALDRGLATIRKNYEAQVKKGKLTAEKLEA 356
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
L ++ L Y + + D++IEAV E + +K+++F L++ P ILA+NTST+D++ +
Sbjct: 357 RLALITPTLSYDDLGEADLIIEAVFEELGVKEQVFRRLDEVAKPGAILASNTSTLDVDRI 416
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
T ++G HFFSPA+VM LLE+VR E+T+ V+ +M + K I+K VV G C G
Sbjct: 417 AAFTQRPQDVVGMHFFSPANVMKLLEVVRGEKTAKDVLATVMQIAKKIRKTAVVSGVCDG 476
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR Y + A ++ G ++D AI +FG +GPF++ DLAG + A K
Sbjct: 477 FIGNRMIEQYIRQALFMLEEGALPAQVDRAIEAFGFAMGPFRMSDLAGNDIGWAIRKRRY 536
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMP 608
P+ + S + D L + GR G+ G G Y Y+ G + + PS L ++E +
Sbjct: 537 VEQPELHY-SKIADRLCELGRFGQKTGGGWYDYQPGER-RAKPSKL--VDEMVLAYSKEA 592
Query: 609 GGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWA 668
G + ++ + EIVE +++ +VNE ++LEEGI +ASD+D + G FP +RGG + +A
Sbjct: 593 GIERRAIGDDEIVERLVYALVNEGAKILEEGIASKASDVDMVYLTGYGFPLWRGGPMLYA 652
Query: 669 DAVGANYVYTSLKKWS 684
D VG V ++++++
Sbjct: 653 DEVGVYNVERAMRRYA 668
>gi|194289576|ref|YP_002005483.1| multifunctional: 3-hydroxybutyryl-CoA epimerase,
delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase,
enoyl-CoA hydratase (n-terminal); 3-hydroxyacyl-CoA
dehydrogenase (c-terminal), partial [Cupriavidus
taiwanensis LMG 19424]
gi|193223411|emb|CAQ69416.1| multifunctional: 3-hydroxybutyryl-CoA epimerase,
delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase,
enoyl-CoA hydratase (N-terminal); 3-hydroxyacyl-CoA
dehydrogenase (C-terminal) [Cupriavidus taiwanensis LMG
19424]
Length = 693
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 265/701 (37%), Positives = 385/701 (54%), Gaps = 28/701 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DGVA+ITL NPPVN L G+ + A VKAIV+TG G FSGG DI F
Sbjct: 8 QDGVAVITLDNPPVNGLGHSTRLGIVEGMTRALDDAAVKAIVITGAGKAFSGGADIREFN 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
M + ++ V+ ++E KP+VAAV +A+GGGLELA+GC+ R+A+ Q+
Sbjct: 68 TPKA------MQEPTLHSVIRVLEASTKPVVAAVHSVAMGGGLELALGCNYRVASKGAQI 121
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
LPE+ LG++PG TQRLPR++GL A M++ ++ SE+ L D +V + +L
Sbjct: 122 ALPEVKLGLLPGAGGTQRLPRVIGLEAAANMIVSGTAVPSEKFAGTKLFDEIVDGD-VLP 180
Query: 189 VSRLWALDIAARR--KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLD 246
+ +A ++ A P +R L + A L AR A N P CL+
Sbjct: 181 AAIKFAQNVGAASGPHPKVRDLKVRHE-----NAEGYLGFARNTVAAMAKNFPAPLKCLE 235
Query: 247 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 306
+ G + G+ +E + F LV SR L H FF +RA SK+P+V + G R +
Sbjct: 236 AVA-GSLKPFEQGLKQEREGFLFLVTTPESRALRHAFFGERAASKIPDVPE-GTPVRKIE 293
Query: 307 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 366
KVAVIG G MG GI+ + I V + E E L +G+ I N +GKLTQ+K
Sbjct: 294 KVAVIGAGTMGGGISMNFLNAGIPVTILETKQEALDRGVGVIRKNYENSAKKGKLTQEKV 353
Query: 367 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 426
+ +L L Y + KD DMVIEAV E + +K+ +F +L++ P ILA+NTST+D+N
Sbjct: 354 EQRMGLLSTTLSYDDIKDADMVIEAVFEEMGVKEIVFKKLDEVMKPGAILASNTSTLDVN 413
Query: 427 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 486
+ T ++G HFFSPA+VM LLE+VR ++T V+ +M V K IKK VV G C
Sbjct: 414 KIASFTKRPQDVVGMHFFSPANVMKLLEVVRGDKTGKDVLATVMQVAKKIKKTAVVSGVC 473
Query: 487 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKE 546
GF NR YS+ A L+ G ++D AI FG +GPF++ DLAG + A K
Sbjct: 474 DGFIGNRMIEQYSRQAGYLLDEGALPEQVDKAIEKFGFAMGPFRMGDLAGNDIGWAIRKR 533
Query: 547 FDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGS-KPKPDPSVLP-IIEECRRLS 604
PD + S DLL + GR G+ G G Y Y+ G KP P+ V I++ + L
Sbjct: 534 RAVDKPDIQY-SKTADLLCEMGRFGQKTGAGWYDYKAGDRKPYPNQQVNDMIVQHSKDL- 591
Query: 605 NIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGI 664
G ++++EIVE ++F +VNE ++LEEGI +ASD+D + G FP +RGG
Sbjct: 592 ----GLTRRKISDEEIVERLVFALVNEGAKILEEGIASKASDIDMVYLTGYGFPLFRGGP 647
Query: 665 VFWADAVGANYVYTSLKKWSQLY-GNFFKPSRFLEERATKG 704
+ +AD VG V ++K++++ Y G ++ + L++ A +G
Sbjct: 648 MLYADQVGLYNVALAMKRYAKGYHGEAWQVAPLLQKLADEG 688
>gi|121594055|ref|YP_985951.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Acidovorax sp. JS42]
gi|120606135|gb|ABM41875.1| 3-hydroxyacyl-CoA dehydrogenase [Acidovorax sp. JS42]
Length = 699
Score = 421 bits (1081), Expect = e-114, Method: Compositional matrix adjust.
Identities = 263/682 (38%), Positives = 382/682 (56%), Gaps = 30/682 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA+ITL NPPVN L + G+ D + A + VKAIV+TG GG FSGG DI F
Sbjct: 11 VAVITLNNPPVNGLGLATRQGIVDGLDRAQADAAVKAIVITGAGGAFSGGADIKEF---- 66
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G + + ++ V+N +E+C KP+VAA+ + +GGGLELA+GCH R+AAP + LP
Sbjct: 67 --GTDKSLQEPNLHSVINAVENCTKPVVAAIHTVCMGGGLELALGCHYRVAAPGCNVALP 124
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSE-----EGWKLGLIDAVVTSEEL 186
E+ LG++PG TQRLPR+VG+ A+ M++ + + SE G KL D + S E
Sbjct: 125 EVKLGILPGAGGTQRLPRVVGVEAALNMIVSGEPVKSEMIGAVPGQKL--FDKMAASPES 182
Query: 187 LKVSRL-WALDIA-ARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 244
L L +A +A R P +R+L E + AR K A N P C
Sbjct: 183 LAEEALAFAQSVADVRPLPLVRNLPCKH-----PEGDAYFQFARNMVKGMAKNFPAPAKC 237
Query: 245 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRG 304
+D +E G+ E ++F L+ SR L H+FFA+RA SK+P+V K R
Sbjct: 238 VDAVEAATKRKFADGLAYERELFINLMWTPESRALRHLFFAERAASKIPDVPSETPK-RD 296
Query: 305 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 364
++KV VIG G MG GI+ + I V + E+ E L +GI TI+ N V +GKL +D
Sbjct: 297 IKKVGVIGAGTMGGGISMNFLNAGIPVTILEMKQEALDRGIGTIQKNYEAQVKKGKLKED 356
Query: 365 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 424
K + +L L+Y++ KD D++IEAV E + +K+ +F +L+ P ILA+NTST+D
Sbjct: 357 KYQQRMALLSTTLNYADLKDCDLIIEAVFEELGVKEAVFKQLDAVAKPGAILASNTSTLD 416
Query: 425 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 484
++ + T ++G HFFSPA+VM LLE+VR + T+ V+ +M + K IKK VV G
Sbjct: 417 VDKIAAFTQRPQDVVGMHFFSPANVMKLLEVVRGKATAKDVLATVMALAKKIKKTAVVSG 476
Query: 485 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATS 544
C GF NR YSQ A L+ G ++D AI FG +GPF++ DLAG + A
Sbjct: 477 VCDGFIGNRMIERYSQQAGFLLDEGCTPQQVDKAIEKFGFAMGPFRMGDLAGNDIGWAIR 536
Query: 545 KEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVLPIIEECRRL 603
K PD + S DLL + GR G+ G G Y Y+ G + P V +IEE R+
Sbjct: 537 KRRAVEQPDMKY-SKTADLLCEMGRFGQKTGAGWYDYQAGKRDAIPSDVVNQMIEEHRKA 595
Query: 604 SNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGG 663
I P V+++EIV+ +++ +VNE ++LEEGI ++ D+D + G FP +RGG
Sbjct: 596 LGITPR----KVSDEEIVQRLVYALVNEGAKILEEGIASKSGDIDMVYLTGYGFPIHRGG 651
Query: 664 IVFWADAVGANYVYTSLKKWSQ 685
+ +A VG V S+K++++
Sbjct: 652 PMHYASEVGLFNVVQSMKRFAR 673
>gi|334343757|ref|YP_004552309.1| 3-hydroxybutyryl-CoA epimerase [Sphingobium chlorophenolicum L-1]
gi|334100379|gb|AEG47803.1| 3-hydroxybutyryl-CoA epimerase [Sphingobium chlorophenolicum L-1]
Length = 680
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 252/694 (36%), Positives = 379/694 (54%), Gaps = 36/694 (5%)
Query: 18 ITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAG 77
I + NPPVNAL I + GL A + VKAIV+ G G FSGG DI F K
Sbjct: 13 IVMNNPPVNALGIGVRQGLAQAIAGAQTNPAVKAIVIRGGGKLFSGGADITEFGKPFA-- 70
Query: 78 DVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELT 137
+ + VV+ IE KP+VAA+ G+ALGGGLE+A+GCH RIA P+T+LGLPE++
Sbjct: 71 ------EPGLPQVVDAIEASAKPVVAAIHGMALGGGLEVALGCHYRIATPETKLGLPEVS 124
Query: 138 LGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWA 194
LG++PG TQRLPRL+G+ A+EM++ + + +G +LGL+D + ++L + +A
Sbjct: 125 LGLLPGAGGTQRLPRLIGVEAALEMIVSGSPVPAAKGAELGLVDKLAAQDQLAAEAIAFA 184
Query: 195 LDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVH 254
+ R RT L + + A + A +K + +AC++ ++
Sbjct: 185 RTVDGPR--------RTGDLDASATADVFERFAENNKRKIGA-LDAPKACIEAVKAATEL 235
Query: 255 GGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGG 313
G LKE +F +L+ D S+ L HVFFA+RA +KV + D+ +P + KV VIG
Sbjct: 236 PLDQGQLKERALFTQLMNGDQSKALRHVFFAERAAAKVDGLPKDVARRP--IAKVGVIGA 293
Query: 314 GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKML 373
G MG GI+ + I V + E+ E L KG I N +G+LT + A+ +L
Sbjct: 294 GTMGGGISMNFLSAGIPVTIVEMTQEALDKGTGLIRKNYEATAAKGRLTMAQVEKAMGLL 353
Query: 374 KGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTS 433
LD+ K+ D++IEAV E++ +K++IF+ L+ P +LA+NTS + ++ + T
Sbjct: 354 SPTLDFDALKECDLIIEAVYENMDVKKEIFTRLDGIAKPGALLASNTSYLSIDEIASATG 413
Query: 434 SQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNR 493
++G HFFSPA+VM L+E+VR +T+ V+ M +G+ I KVPVV G C GF NR
Sbjct: 414 RPQDVLGLHFFSPANVMKLVEVVRGAKTAPDVLATGMDIGRRIGKVPVVSGVCYGFIGNR 473
Query: 494 AFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPD 553
P A ++ G ++D FG+P+GP Q++DLAG + P+
Sbjct: 474 MLAPRLNGAIAMLVEGATAEQVDRVSVEFGMPMGPLQMIDLAGVDIGWHRD-------PN 526
Query: 554 RSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPI 613
R + D L +GR G+ G G Y Y++ +P P P+ II++ R + P
Sbjct: 527 RI--ESVRDALNAAGRWGQKTGAGFYDYDERRRPAPSPAAQAIIDDFRAREGV----APR 580
Query: 614 SVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGA 673
+++E EIV L+ +VNE+ +LEEGI RASD+D G +P ++GG +FWAD VG
Sbjct: 581 AISEDEIVTRTLYVMVNEAAHILEEGIAQRASDIDIVWNYGYGWPRHKGGPMFWADLVGL 640
Query: 674 NYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPL 707
N + +L ++ G F S L A +G PL
Sbjct: 641 NKIVDALDRYRDRLGPEFTLSPLLARCAKEGRPL 674
>gi|113867537|ref|YP_726026.1| enoyl-CoA hydratase/Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase
[Ralstonia eutropha H16]
gi|113526313|emb|CAJ92658.1| Enoyl-CoA hydratase/Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase
[Ralstonia eutropha H16]
Length = 693
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 263/700 (37%), Positives = 382/700 (54%), Gaps = 26/700 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DGVA+ITL NPPVN L G+ + A VKAIV+TG G FSGG DI F
Sbjct: 8 QDGVAVITLDNPPVNGLGHSTRLGIVEGMTRALDDAAVKAIVITGAGKAFSGGADIREFN 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
M + ++ V+ ++E KP+VAAV +A+GGGLELA+GC+ R+A+ Q+
Sbjct: 68 TPKA------MQEPTLHSVIRVLEGSSKPVVAAVHSVAMGGGLELALGCNYRVASKGAQI 121
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
LPE+ LG++PG TQRLPR++GL A M++ + SE+ L D +V + +L
Sbjct: 122 ALPEVKLGLLPGAGGTQRLPRVIGLEAAANMIVSGTPVLSEKFAGTKLFDEIVDGD-VLP 180
Query: 189 VSRLWALDIAARR--KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLD 246
+ +A ++ A P +R L + L AR A N P CL+
Sbjct: 181 AAVKFAQNVGAATGPHPKVRDLKVRHE-----NPEGYLGFARNTVAAMAKNFPAPLKCLE 235
Query: 247 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 306
+ G + G+ +E + F LV SR L H FF +RA SK+P+V + G R +
Sbjct: 236 AVA-GSLKPFEQGLKQEREGFLYLVTTPESRALRHAFFGERAASKIPDVPE-GTPTRKIE 293
Query: 307 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 366
KVAVIG G MG GI+ + I V + E E L +G+ I N +GKLTQ+K
Sbjct: 294 KVAVIGAGTMGGGISMNFLNAGIPVTILETKQEALDRGVGIIRKNYENSAKKGKLTQEKV 353
Query: 367 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 426
+ +L L Y + KD D++IEAV E + +K+ +F +L++ ILA+NTST+D+N
Sbjct: 354 EQRMGLLSTTLSYDDLKDADLIIEAVFEEMGVKETVFKKLDEVAKQGAILASNTSTLDVN 413
Query: 427 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 486
+ T ++G HFFSPA+VM LLE+VR E+T V+ +M VGK IKK VV G C
Sbjct: 414 KIASFTKRPQDVVGMHFFSPANVMKLLEVVRGEKTGKDVLATVMQVGKKIKKTAVVSGVC 473
Query: 487 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKE 546
GF NR YS+ A L+ G ++D AI FG +GPF++ DLAG + A K
Sbjct: 474 DGFIGNRMIEQYSRQAGYLLDEGALPEQVDKAIEKFGFAMGPFRMGDLAGNDIGWAIRKR 533
Query: 547 FDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGS-KPKPDPSVLPIIEECRRLSN 605
P+ + S DLL + GR G+ G G Y Y+ G KP P+ V +I + +
Sbjct: 534 RAVDKPEIQY-SKTADLLCEMGRFGQKTGAGWYDYKAGDRKPYPNQQVNDMIVQHSKDLG 592
Query: 606 IMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIV 665
I ++++EIVE ++F +VNE R+LEEGI +ASD+D + G FP +RGG +
Sbjct: 593 IT----RRKISDEEIVERLVFALVNEGARILEEGIASKASDIDMVYLTGYGFPLFRGGPM 648
Query: 666 FWADAVGANYVYTSLKKWSQLY-GNFFKPSRFLEERATKG 704
+AD VG V S+K++++ Y G ++ + L++ A +G
Sbjct: 649 LYADQVGLYNVALSMKRYAKGYHGEAWQVAPLLQKLADEG 688
>gi|94310793|ref|YP_584003.1| multifunctional 3-hydroxybutyryl-CoA epimerase
/delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase/enoyl-CoA hydratase/3-hydroxyacyl-CoA
dehydrogenase [Cupriavidus metallidurans CH34]
gi|430809384|ref|ZP_19436499.1| 3-hydroxyacyl-CoA dehydrogenase [Cupriavidus sp. HMR-1]
gi|93354645|gb|ABF08734.1| fused 3-hydroxybutyryl-CoA epimerase and
delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase and
enoyl-CoA hydratase ; 3-hydroxyacyl-CoA dehydrogenase
[Cupriavidus metallidurans CH34]
gi|429498193|gb|EKZ96707.1| 3-hydroxyacyl-CoA dehydrogenase [Cupriavidus sp. HMR-1]
Length = 693
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 261/683 (38%), Positives = 373/683 (54%), Gaps = 27/683 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DGVA+ITL NPPVN L G+ + A VKA+V+TG G FSGG DI F
Sbjct: 8 QDGVAVITLDNPPVNGLGHSTRLGIVEGLTRALDDAAVKAVVITGAGKAFSGGADIREFN 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ +L V+ +E KPIVAA+ +A+GGGLELA+GC+ R+AA Q+
Sbjct: 68 TPKATQEPTLHS------VIRALEASTKPIVAAIHSVAMGGGLELALGCNYRVAAKGAQI 121
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
LPE+ LG++PG TQRLPRL+GL A+ M++ +I SE+ L D +V + +L
Sbjct: 122 ALPEVKLGLLPGAGGTQRLPRLIGLEHALNMIVSGTAIPSEKFAGSKLFDEIVDGD-VLP 180
Query: 189 VSRLWALDIAARRKPW--IRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLD 246
+ +A +AA P+ +R L + A L AR A N P C+D
Sbjct: 181 AAVKFAQSVAAAPGPYPKVRDLKVRHE-----NAEGFLAFARNTVAAVAKNFPAPLKCVD 235
Query: 247 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 306
+ + +G+ E F LV SR L H FF +RA SK+P+V + G R +
Sbjct: 236 AVAASL-KPFEAGLKDERDGFMYLVGTPESRALRHAFFGERAASKIPDVPE-GTPVRKIE 293
Query: 307 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 366
+VAVIG G MG GI + I V + E+ E L +G+ TI N +GKLTQ+K
Sbjct: 294 RVAVIGAGTMGGGITMNFLNAGIPVTMLEMKQEALERGVATIRRNYENSAKKGKLTQEKV 353
Query: 367 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 426
+ +L + Y + K+ D+VIEAV E + +K+ +F +L++ ILA+NTST+D+N
Sbjct: 354 EQRMGLLTTTMSYDDIKNADLVIEAVFEEMGVKETVFKKLDEVMKDGAILASNTSTLDVN 413
Query: 427 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 486
+ T ++G HFFSPA+VM LLE+VR E+T V+ +M +GK IKK VV G C
Sbjct: 414 KIASFTRRPQDVVGMHFFSPANVMKLLEVVRGEKTGKDVLATVMQIGKKIKKTAVVSGVC 473
Query: 487 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKE 546
GF NR YS+ A L+ G ++D AI FG +GPF++ DLAG + A K
Sbjct: 474 DGFIGNRMIEQYSRQAGYLLDEGALPEQVDKAIEKFGFAMGPFRMGDLAGNDIGWAIRKR 533
Query: 547 FDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGS-KPKPDPSVLP-IIEECRRLS 604
PD + S D L + GR G+ G G Y Y+ G KP P+ V I+E + L
Sbjct: 534 RAVDKPDIQY-SKTADKLCEMGRFGQKTGAGWYDYKAGDRKPYPNKQVNDMIVEHSKEL- 591
Query: 605 NIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGI 664
G ++++EIVE ++F +VNE ++LEEGI +ASD+D + G FP +RGG
Sbjct: 592 ----GITRRKISDEEIVERLVFALVNEGAKILEEGIASKASDIDMVYLTGYGFPLFRGGP 647
Query: 665 VFWADAVGANYVYTSLKKWSQLY 687
+ +AD VG V S+K++++ Y
Sbjct: 648 MLYADQVGLYNVAQSMKRYAKGY 670
>gi|410632204|ref|ZP_11342868.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola arctica BSs20135]
gi|410148204|dbj|GAC19735.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola arctica BSs20135]
Length = 710
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 260/705 (36%), Positives = 395/705 (56%), Gaps = 32/705 (4%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
N+ VA + + NPPVNAL+ + GL + A + + V IV++ FSGG DI+ F
Sbjct: 20 NNKVAALWMQNPPVNALSKSVRVGLIEHLNAAIADESVDVIVISSKQNLFSGGADISEFS 79
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
GD L P++ V V+++IE+ KP+VA + G A GGGLE+A+ CH R+ ++
Sbjct: 80 ----GGD--LEPNLPV--VLDVIENSPKPVVAVLNGPAFGGGLEVALSCHYRVTFASNKV 131
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKL-GLIDAVVTSEELL 187
GLPE+ LG++PG TQRLPRL G+ +A++M++ + + ++ KL G+ D VV S E L
Sbjct: 132 GLPEVNLGILPGAGGTQRLPRLAGVQQALDMIVSGRPVAAK---KLPGVFDVVVDSPETL 188
Query: 188 KVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDV 247
S L + +R ++ + +E+ R A + C+
Sbjct: 189 LSSALAFCEKVVAEGSKVRKTCDV-QIDVSTAPKELFAQYRKGLATQARGFFAPERCIQA 247
Query: 248 IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRK 307
+E + G+++E ++F E + +R H FFA+RA S V + D R ++
Sbjct: 248 VEASVELPFAEGLVREGELFMECMRSKEARAQQHFFFAERAASHVKDF-DKETPVRDIKT 306
Query: 308 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 367
V +IG G MG GIA I V++ E+ E L KG+ I N +GKLT ++
Sbjct: 307 VGIIGAGTMGGGIAMNFANAGIPVIMLELKQEALDKGLALIRKNYENSAKKGKLTAEQVE 366
Query: 368 NALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 427
+ + +L G +Y+ DVD+VIEAV E + +KQ++F L+ C P ILA+NTST+D++
Sbjct: 367 DRMALLTGSTEYAALSDVDLVIEAVFEKMSVKQEVFKALDAVCKPGAILASNTSTLDIDE 426
Query: 428 VGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 487
+GE T + +IG HFFSPA+VM LLE+V+T +TS +VI M + K I KV V+VG C
Sbjct: 427 IGEATKRPEDVIGLHFFSPANVMKLLEVVKTSKTSPEVIKTAMKMAKKINKVAVLVGVCF 486
Query: 488 GFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAA---ATS 544
GF NR Y + A ++ G ID I FGLP+GPF + D+AG + A +
Sbjct: 487 GFVGNRMIEGYGREANRMMLEGGTPEHIDKVIYDFGLPMGPFTMGDMAGQDIGAFVRESR 546
Query: 545 KEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGS-KPKPDPSVLPIIEECRRL 603
+EF K P L D L++ GR G GKG+Y YE G+ KP PDPSVL E +++
Sbjct: 547 REFIKHDPTYCI---LADKLVEQGRVGLKAGKGVYLYEAGNRKPIPDPSVL---ELAKQV 600
Query: 604 SNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGG 663
+ + G ++++EI+E I+FP++NE +LEEGI ++SD+D V G FP YRGG
Sbjct: 601 AADL-GVAQRDISDQEIIERIIFPMINEGALILEEGIAAKSSDIDVIYVYGYGFPVYRGG 659
Query: 664 IVFWADAVGANYVYTSLKKWSQLYG----NFFKPSRFLEERATKG 704
+ +AD +G VY ++ K+ G N+F+P+ L++ A +G
Sbjct: 660 PMQYADEIGLKTVYDAMCKYRDELGEHGKNWFEPAPLLKKLAEQG 704
>gi|403519024|ref|YP_006653157.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
domain-containing protein [Burkholderia pseudomallei
BPC006]
gi|403074666|gb|AFR16246.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
domain-containing protein [Burkholderia pseudomallei
BPC006]
Length = 692
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 256/677 (37%), Positives = 370/677 (54%), Gaps = 20/677 (2%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVN L + G+ + E A V AIVLTG G FSGG DI F
Sbjct: 7 DGVAVITLNNPPVNGLGLSTRLGIMEGLERAQRDPAVAAIVLTGAGRAFSGGADITEFNT 66
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + ++ V++ +E KP+V A+ +A+GGGLELA+G H R+A+ Q+
Sbjct: 67 PKA------LQEPTLHTVIDAVEASGKPVVVAIHSVAMGGGLELALGAHYRVASAGAQIA 120
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 189
LPE+ LG++PG TQRLPR VGL A+ M++ + SE+ K GL DA V + LL+
Sbjct: 121 LPEVKLGLLPGAGGTQRLPRAVGLETALNMIVSGAPVPSEQLAKSGLFDAFVEGD-LLEA 179
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
+ +A A P R D+ A ++ AR K A + P C+D IE
Sbjct: 180 AVAFARKAGAASGPHPRV---RDREIVHENAAGFIQFARNSVKAVAQHYPAPHKCIDAIE 236
Query: 250 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKV 308
G++ G G+ E F LV S L H FF +RA K+ +V D + RG+ V
Sbjct: 237 AGVLQGFDKGLAFERDCFVALVQTPESCALRHAFFGERAAGKIADVPADTAV--RGIESV 294
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
AVIG G MG GI + + V L E E L +G+ TI N V++GKLTQ+K +
Sbjct: 295 AVIGAGTMGGGITMNFLNAGLPVTLLETKQEALERGLATIRKNYDAQVSKGKLTQEKLDA 354
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
+ +L+ L Y + KD D+VIEAV E + +K+++F L++ P ILA+NTST+D+N +
Sbjct: 355 RMALLRPTLSYDDLKDADLVIEAVFEELGVKEQVFKRLDEVAKPGAILASNTSTLDVNKI 414
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
T ++G HFFSPA+VM LLE+VR E T+ V+ +M + K I+K VV G C G
Sbjct: 415 AAFTRRPQDVVGLHFFSPANVMKLLEVVRGEHTAKDVLATVMQLAKKIRKTAVVSGVCDG 474
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR Y + A ++ G +ID AI +FG +GPF++ DLAG + A K
Sbjct: 475 FIGNRMVEQYIRQALFMLEEGALPAQIDRAIEAFGFAMGPFRMSDLAGNDIGWAIRKRRY 534
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMP 608
PD + S + D L + GR G+ G G Y Y G + + PS L ++E +
Sbjct: 535 VEQPDLHY-SKIADRLCEQGRFGQKTGAGWYDYVPGER-RAKPSKL--VDEMIVAYSSER 590
Query: 609 GGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWA 668
G + + EIVE +++ +VNE ++LEE I +ASD+D + G FP +RGG + +A
Sbjct: 591 GVARRQIGDAEIVERLVYALVNEGAKILEEKIASKASDIDMVYLTGYGFPLWRGGPMLYA 650
Query: 669 DAVGANYVYTSLKKWSQ 685
D VG V +++ ++Q
Sbjct: 651 DTVGLYNVERAMRGYAQ 667
>gi|410628150|ref|ZP_11338879.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola mesophila KMM 241]
gi|410152372|dbj|GAC25648.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola mesophila KMM 241]
Length = 702
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 264/709 (37%), Positives = 397/709 (55%), Gaps = 46/709 (6%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA++ + +PPVNAL+ + GL + +A +VKAIV++ FSGG DI+ F +
Sbjct: 13 VAVLYMQSPPVNALSKSVRVGLIENINQALDNAEVKAIVISSKLALFSGGADISEFSGGN 72
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
L P + V+++IE+ KP++A + G A GGGLE+A+ CH R+ ++GLP
Sbjct: 73 ------LEPHLPT--VLDVIENATKPVIAVLNGPAFGGGLEVALSCHYRVTFASNKVGLP 124
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKL-GLIDAVVT------SE 184
E+ LG++PG TQRLPRL G++KA++M++ S E+ KL G+ D VV SE
Sbjct: 125 EVNLGILPGAGGTQRLPRLAGVAKALDMIV---SGRPEKASKLAGVFDLVVEDPTNLLSE 181
Query: 185 ELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 244
+ V ++ A D A RK ++ ++ S E+ R KK A + C
Sbjct: 182 AMAFVQKVIA-DGAQVRKTSDVAIDKS------SAPDELFAQYRQGLKKQARGFFAPERC 234
Query: 245 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRG 304
+ +E + G+++E ++F E + +R H FFA+RA + V + D R
Sbjct: 235 IQAVEASVSLPFEQGLVREGELFMECMGSKEARAQQHFFFAERAAAHVSDY-DKSTPTRD 293
Query: 305 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 364
++KV +IG G MG GIA I V++ E+ E L KG+ I N +GKLTQ
Sbjct: 294 IKKVGIIGAGTMGGGIAMNFANAGIPVIMLELKQEALDKGLALIRKNYENSAKKGKLTQQ 353
Query: 365 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 424
+ +L+G +Y+ DVD+VIEAV E + +K+++F L+K C ILA+NTST+D
Sbjct: 354 AVEERMALLQGSTEYAALSDVDLVIEAVFEKMSVKKEVFGALDKVCKKGAILASNTSTLD 413
Query: 425 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 484
+N + TS + +IG HFFSPA+VM LLE+V+ E+TSA VI M + K I KV V+VG
Sbjct: 414 VNEIAASTSRPEDVIGLHFFSPANVMKLLEVVKAEKTSADVIKTCMQMAKKINKVAVLVG 473
Query: 485 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVA---A 541
C GF NR PY + A L+ G +ID I FGLP+GPF + D+AG +
Sbjct: 474 VCFGFVGNRMIEPYGREAARLMLEGATPQQIDKVIYDFGLPMGPFTMGDMAGLDIGFYVR 533
Query: 542 ATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPII-EE 599
+ +EF P S D L+K GR G +G+G Y YE G++ P PDP V+ + EE
Sbjct: 534 ESRREFIAHDPSYCVVS---DRLVKQGRVGLKSGRGAYMYEPGNRMPIPDPEVVEMAKEE 590
Query: 600 CRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPS 659
RL G ++++EI+E I+FP++NE +LEEGI ++SD+D V G FP
Sbjct: 591 AARL-----GIAQRDISDQEILERIIFPLINEGALILEEGIAAKSSDIDVIYVYGYGFPV 645
Query: 660 YRGGIVFWADAVGANYVYTSLKKW----SQLYGNFFKPSRFLEERATKG 704
YRGG + +AD +G VY ++ K+ + G++F+P+ L++ A +G
Sbjct: 646 YRGGPMQYADEIGLKKVYDAMCKYRDELGEYGGHWFEPAPLLKQLAEQG 694
>gi|109898233|ref|YP_661488.1| 3-hydroxyacyl-CoA dehydrogenase [Pseudoalteromonas atlantica T6c]
gi|109700514|gb|ABG40434.1| 3-hydroxyacyl-CoA dehydrogenase [Pseudoalteromonas atlantica T6c]
Length = 702
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 260/709 (36%), Positives = 394/709 (55%), Gaps = 46/709 (6%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA++ + +PPVNAL+ + GL + +A D V+AIV++ FSGG DI+ F +
Sbjct: 13 VAVLYMQSPPVNALSKSVRVGLIENINQALDNDQVEAIVISSKLALFSGGADISEFSGGN 72
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
L P + V+++IE+ KP++A + G A GGGLE+A+ CH R+ ++GLP
Sbjct: 73 ------LEPHLPT--VLDVIENASKPVIAVLNGPAFGGGLEVALSCHYRVTFASNKVGLP 124
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKL-GLIDAVVT------SE 184
E+ LG++PG TQRLPRL G++KA++M++ S E+ KL G+ D +V SE
Sbjct: 125 EVNLGILPGAGGTQRLPRLAGVAKALDMIV---SGRPEKASKLAGVFDLIVEDPTNLLSE 181
Query: 185 ELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 244
+ V ++ A R+ + + S E+ R KK A + C
Sbjct: 182 AMAFVQKVVAEGAKVRKTSDV-------AIDKASAPDELFAQYRQGLKKQARGFFAPERC 234
Query: 245 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRG 304
+ +E + G+++E+++F E + +R H FFA+RA + V + D R
Sbjct: 235 IQAVEASVSLPFEQGLVRESELFMECMGSKEARAQQHFFFAERAAAHVSDY-DKSTPTRD 293
Query: 305 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 364
++KV +IG G MG GIA I V++ E+ E L KG+ I N +GKLTQ
Sbjct: 294 IKKVGIIGAGTMGGGIAMNFANAGIPVIMLELKQEALDKGLALIRKNYENSAKKGKLTQQ 353
Query: 365 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 424
+ + +L+G +Y DVD+VIEAV E + +K+++F L+K C ILA+NTST+D
Sbjct: 354 AVEDRMALLQGSTEYEALSDVDLVIEAVFEKMSVKKEVFGALDKVCKKGAILASNTSTLD 413
Query: 425 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 484
+N + TS + +IG HFFSPA+VM LLE+V+ E+TSA VI M + K I KV V+VG
Sbjct: 414 VNEIAASTSRPEDVIGLHFFSPANVMKLLEVVKAEKTSADVIKTCMQMAKKINKVAVLVG 473
Query: 485 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVA---A 541
C GF NR PY + A L+ G +ID I FGLP+GPF + D+AG +
Sbjct: 474 VCFGFVGNRMIEPYGREAARLMLEGATPQQIDKVIYDFGLPMGPFTMGDMAGLDIGFYVR 533
Query: 542 ATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPII-EE 599
+ +EF P S D L+K GR G +G+G Y YE G++ P PDP V+ + EE
Sbjct: 534 ESRREFIAHDPSYCVVS---DRLVKQGRVGLKSGRGAYMYEPGNRMPIPDPEVVEMAKEE 590
Query: 600 CRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPS 659
RL G ++++EI+E I+FP++NE +LEEGI ++SD+D V G FP
Sbjct: 591 AARL-----GIAQRDISDQEILERIIFPLINEGALILEEGIAAKSSDIDVIYVYGYGFPV 645
Query: 660 YRGGIVFWADAVGANYVYTSLKKW----SQLYGNFFKPSRFLEERATKG 704
YRGG + +AD +G VY ++ K+ + G++F+P+ L++ A +G
Sbjct: 646 YRGGPMQYADEIGLKKVYDAMCKYRDELGEYGGHWFEPAPLLKQLAEQG 694
>gi|221067466|ref|ZP_03543571.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Comamonas testosteroni
KF-1]
gi|220712489|gb|EED67857.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Comamonas testosteroni
KF-1]
Length = 706
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 254/698 (36%), Positives = 382/698 (54%), Gaps = 22/698 (3%)
Query: 14 GVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKV 73
GVA+I + NPPVN L + G+ A + V+A+VL G G F GG DI F
Sbjct: 21 GVALIVIDNPPVNGLGDTVRRGIAQGIARAQASTAVRAVVLRGQGKVFCGGADIRQFNTP 80
Query: 74 HGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGL 133
A S M + V IE C KP+VA + G+ALGGGLELA+ CH R+A ++GL
Sbjct: 81 --AATASPM----LRQVNRSIERCTKPVVACIHGVALGGGLELALACHYRVADSSARMGL 134
Query: 134 PELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVS 190
PE+ LG++PG TQRLPRL+G + A+ ++ K + ++E +LGL+DA+ ++L + S
Sbjct: 135 PEVNLGLVPGGGGTQRLPRLIGAADAVRLITSGKHVEAKEALELGLVDAIF-EDDLEQAS 193
Query: 191 RLWALDIAARRK--PWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 248
++AL +A P + + G L + R A N +A + +
Sbjct: 194 LMFALSMADSHPALPVLADIQAPPPKGELPD----FDRLRTGINPKARNAIAQRAAIQCV 249
Query: 249 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 308
+ G+ KE ++F+ELV+ S+ L H+FFA++ +K D + R + +V
Sbjct: 250 RSAMDLPFEQGLDKERELFEELVVGAPSKSLRHIFFAEKEAAKFVG-RDCDVAERQICRV 308
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
++G G MG GIA A I VVL E L +G+ IE N + V+RG LT +
Sbjct: 309 GILGAGTMGGGIAMAFANAGIPVVLCEREQAALDRGMAMIERNYQISVSRGGLTAEAVKE 368
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
++ ++ LD S F +VD+VIEAV E + +K+ +F +L++ C ILATNTS +++N +
Sbjct: 369 RMQHIQQTLDLSAFAEVDLVIEAVFEDMAIKRDVFVQLDRICRKGTILATNTSRLNINEI 428
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
T + +IG HFFSPA+VM LLE+VR ERT VI M + I K+PV+VG C G
Sbjct: 429 AAVTQRPEDVIGLHFFSPANVMKLLEVVRGERTCDAVIASCMQMAVAIGKIPVLVGVCEG 488
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR Y + A L+ G V +ID+A+++FG +GP + DLAG + AT K
Sbjct: 489 FVGNRMLTGYWREAGFLLEEGATVQQIDAAMQAFGFAMGPLAMADLAGLDINWATRKRLA 548
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIM 607
S + D + + GR G+ G G Y YE G++ P PDP V +I EC R++ I
Sbjct: 549 STRASHLRYSRVADSICEQGRFGQKTGAGYYRYEAGNRTPVPDPFVEALIAECARVAGI- 607
Query: 608 PGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFW 667
+ V ++EIVE + +VNE R+++EGI RASD+D V G FP++RGG +F
Sbjct: 608 ---ERRRVRDEEIVERCVLALVNEGARIVDEGIAQRASDVDVVYVNGYGFPAWRGGPMFH 664
Query: 668 ADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGI 705
A ++G V ++ +G + + ++E++A I
Sbjct: 665 AQSLGWTQVLAKIRDLHARHGEHWIVAPWIEQQALNDI 702
>gi|126453618|ref|YP_001066597.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
domain-containing protein [Burkholderia pseudomallei
1106a]
gi|167845292|ref|ZP_02470800.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia pseudomallei
B7210]
gi|242316511|ref|ZP_04815527.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia pseudomallei
1106b]
gi|254198130|ref|ZP_04904552.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia pseudomallei
S13]
gi|254297334|ref|ZP_04964787.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia pseudomallei
406e]
gi|126227260|gb|ABN90800.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia pseudomallei
1106a]
gi|157808034|gb|EDO85204.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia pseudomallei
406e]
gi|169654871|gb|EDS87564.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia pseudomallei
S13]
gi|242139750|gb|EES26152.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia pseudomallei
1106b]
Length = 694
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 256/677 (37%), Positives = 370/677 (54%), Gaps = 20/677 (2%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVN L + G+ + E A V AIVLTG G FSGG DI F
Sbjct: 9 DGVAVITLNNPPVNGLGLSTRLGIMEGLERAQRDPAVAAIVLTGAGRAFSGGADITEFNT 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + ++ V++ +E KP+V A+ +A+GGGLELA+G H R+A+ Q+
Sbjct: 69 PKA------LQEPTLHTVIDAVEASGKPVVVAIHSVAMGGGLELALGAHYRVASAGAQIA 122
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 189
LPE+ LG++PG TQRLPR VGL A+ M++ + SE+ K GL DA V + LL+
Sbjct: 123 LPEVKLGLLPGAGGTQRLPRAVGLETALNMIVSGAPVPSEQLAKSGLFDAFVEGD-LLEA 181
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
+ +A A P R D+ A ++ AR K A + P C+D IE
Sbjct: 182 AVAFARKAGAASGPHPRV---RDREIVHENAAGFIQFARNSVKAVAQHYPAPHKCIDAIE 238
Query: 250 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKV 308
G++ G G+ E F LV S L H FF +RA K+ +V D + RG+ V
Sbjct: 239 AGVLQGFDKGLAFERDCFVALVQTPESCALRHAFFGERAAGKIADVPADTAV--RGIESV 296
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
AVIG G MG GI + + V L E E L +G+ TI N V++GKLTQ+K +
Sbjct: 297 AVIGAGTMGGGITMNFLNAGLPVTLLETKQEALERGLATIRKNYDAQVSKGKLTQEKLDA 356
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
+ +L+ L Y + KD D+VIEAV E + +K+++F L++ P ILA+NTST+D+N +
Sbjct: 357 RMALLRPTLSYDDLKDADLVIEAVFEELGVKEQVFKRLDEVAKPGAILASNTSTLDVNKI 416
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
T ++G HFFSPA+VM LLE+VR E T+ V+ +M + K I+K VV G C G
Sbjct: 417 AAFTRRPQDVVGLHFFSPANVMKLLEVVRGEHTAKDVLATVMQLAKKIRKTAVVSGVCDG 476
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR Y + A ++ G +ID AI +FG +GPF++ DLAG + A K
Sbjct: 477 FIGNRMVEQYIRQALFMLEEGALPAQIDRAIEAFGFAMGPFRMSDLAGNDIGWAIRKRRY 536
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMP 608
PD + S + D L + GR G+ G G Y Y G + + PS L ++E +
Sbjct: 537 VEQPDLHY-SKIADRLCEQGRFGQKTGAGWYDYVPGER-RAKPSKL--VDEMIVAYSSER 592
Query: 609 GGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWA 668
G + + EIVE +++ +VNE ++LEE I +ASD+D + G FP +RGG + +A
Sbjct: 593 GVARRQIGDAEIVERLVYALVNEGAKILEEKIASKASDIDMVYLTGYGFPLWRGGPMLYA 652
Query: 669 DAVGANYVYTSLKKWSQ 685
D VG V +++ ++Q
Sbjct: 653 DTVGLYNVERAMRGYAQ 669
>gi|94314029|ref|YP_587238.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Cupriavidus metallidurans CH34]
gi|93357881|gb|ABF11969.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Cupriavidus metallidurans CH34]
Length = 715
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 257/698 (36%), Positives = 370/698 (53%), Gaps = 20/698 (2%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A++ L NPPVN L AGL A V +VL G G F GG DI F
Sbjct: 22 IAVLWLDNPPVNGLGDSTRAGLHAGITRALQDATVAGVVLAGAGKAFCGGADIRQF-NTP 80
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
A L DV + LIE KP+VAA+ G+ALGGGLELAMGCH R+ A LGLP
Sbjct: 81 AATARPLTRDV-----LALIESASKPVVAAIHGVALGGGLELAMGCHYRVVASDASLGLP 135
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEE--LLKV 189
E+ LG++PG TQRLPRLVG+ +A++M+ S++ E ++GL DAV +
Sbjct: 136 EVNLGLVPGGGGTQRLPRLVGVEQALDMVQQGASVSGEAAARIGLADAVADARPSGTRDA 195
Query: 190 SRLWALDIAARRKPWIRSL-HRTDKLGSLSEAREVLKLARLQA-KKTAPNMPQHQACLDV 247
+ AL I R R++ H ++ + +V AR+ A A N AC+
Sbjct: 196 GPVVALAIDFCRSAAARAVAHPVASALAVKASGDVDFGARIAAINGKARNALAQNACIRC 255
Query: 248 IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRK 307
+E G+ E F+ LV + S+ L H+FFA+R K + L+P + +
Sbjct: 256 VEAATQLPIADGLAFERAQFEALVAGNESKALRHIFFAEREAPKFAEGKGLALRP--IER 313
Query: 308 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 367
VAVIG G MG GIA + + I V+L E L +G+ I N +GKL + +
Sbjct: 314 VAVIGSGTMGVGIAMSFVNAGIPVMLIEREQAALDRGMALIRRNYEITAAKGKLAPQQID 373
Query: 368 NALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 427
+ + L + D D+V+EAV E + +KQ IF L+ C P ILATNTS ++++
Sbjct: 374 ACMGRITPTLAFEAVADADLVVEAVFEDMAVKQAIFERLDALCKPSAILATNTSRLNIDT 433
Query: 428 VGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 487
+ T +IG HFFSPA+VM LLE+VR + T A VI M + + I+K+PV+V C
Sbjct: 434 IAASTKRPGDVIGLHFFSPANVMKLLEVVRGQATRADVIASCMAMAQRIRKIPVLVRVCE 493
Query: 488 GFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEF 547
GF NR PY + A L+ G ++D A+ FG+ +GP + DLAG + AT K
Sbjct: 494 GFVGNRMLTPYWREAGFLLEEGASPLQVDRALTQFGMAMGPLTMADLAGMDINWATRKRL 553
Query: 548 DKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNI 606
P S + D + + GR G+ G Y YE GS+ P PDP + +IEEC R + I
Sbjct: 554 APTRPAHLRYSAVADRICELGRFGQKTNGGYYRYEPGSRTPIPDPQIDALIEECAREAGI 613
Query: 607 MPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVF 666
+P V ++EIVE + ++NE R+L+EGI RASD+D V G FP++RGG +F
Sbjct: 614 TR--RP--VADEEIVERCMLALINEGARILDEGIAQRASDIDVVYVHGYGFPAWRGGPMF 669
Query: 667 WADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+A+ +G +V ++ ++G ++P+ LE +G
Sbjct: 670 YAETLGLAHVLARIRALQDVHGAHWEPAPLLERLVAEG 707
>gi|73541099|ref|YP_295619.1| 3-hydroxyacyl-CoA dehydrogenase [Ralstonia eutropha JMP134]
gi|72118512|gb|AAZ60775.1| 3-hydroxyacyl-CoA dehydrogenase [Ralstonia eutropha JMP134]
Length = 693
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 266/701 (37%), Positives = 383/701 (54%), Gaps = 28/701 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DGVA+ITL NPPVN L G+ D A VKAIV+TG G FSGG DI F
Sbjct: 8 QDGVAVITLDNPPVNGLGHSTRLGIVDGMTRALDDAAVKAIVITGAGKAFSGGADIREFN 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ +L V+ +IE KP+VAAV +A+GGGLELA+GC+ R+A+ Q+
Sbjct: 68 TPKATQEPTLHS------VIRVIEGSSKPVVAAVHSVAMGGGLELALGCNYRVASKGAQI 121
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
LPE+ LG++PG TQRLPR++GL A M++ ++ SE+ L D +V + +L
Sbjct: 122 ALPEVKLGLLPGAGGTQRLPRVIGLEAAANMIVSGTAVPSEKFAGTKLFDEIVDGD-VLP 180
Query: 189 VSRLWALDIAARRKPW--IRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLD 246
+ +A ++AA P+ +R L + L A+ A N P CL+
Sbjct: 181 AAVKFAQNVAAAPGPYPKVRDLKVRHE-----NPEGFLGFAKTTVGAMAKNFPAPLKCLE 235
Query: 247 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGV 305
+ G + G+ +E F LV SR L H FF +RA SK+P+V +D L R +
Sbjct: 236 AVA-GSLKPFEQGLKEERDGFLYLVTTPESRALRHAFFGERAASKIPDVPSDTPL--RKI 292
Query: 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDK 365
K+AVIG G MG GI+ + I V + E E L +GI I N +GKLTQ+K
Sbjct: 293 EKIAVIGAGTMGGGISMNFLNAGIPVTILETKQEALDRGIGIIRKNYENSAKKGKLTQEK 352
Query: 366 ANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL 425
+ +L L Y + KD DMVIEAV E + +K+ +F +L++ ILA+NTST+D+
Sbjct: 353 VEQRMGLLSTTLSYDDIKDADMVIEAVFEEMGVKEIVFKKLDEVMKQGAILASNTSTLDV 412
Query: 426 NIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 485
+ + T ++G HFFSPA+VM LLE+VR +T V+ +M +GK IKK VV G
Sbjct: 413 DKIASFTKRPQDVVGMHFFSPANVMKLLEVVRGAKTGKDVLATVMAIGKKIKKTAVVSGV 472
Query: 486 CTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSK 545
C GF NR YS+ A L+ G ++D AI FG +GPF++ DLAG + A K
Sbjct: 473 CDGFIGNRMIEQYSRQAGYLLDEGALPEQVDRAIEKFGFAMGPFRMGDLAGNDIGWAIRK 532
Query: 546 EFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGS-KPKPDPSVLPIIEECRRLS 604
PD + S DLL + GR G+ G G Y Y+ G KP P+ V +I + +
Sbjct: 533 RRAVDKPDIQY-SKTADLLCEMGRYGQKTGAGWYDYKAGDRKPYPNQQVNDMIVQHSKDL 591
Query: 605 NIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGI 664
I ++++EIVE ++F +VNE ++LEEGI +ASD+D + G FP +RGG
Sbjct: 592 GIT----RRKISDEEIVERLVFALVNEGAKILEEGIASKASDIDMVYLTGYGFPLFRGGP 647
Query: 665 VFWADAVGANYVYTSLKKWSQLY-GNFFKPSRFLEERATKG 704
+ +AD VG V S+KK+++ Y G ++ + L++ A +G
Sbjct: 648 MLYADQVGLYNVALSMKKYAKGYHGEAWQVAPLLQKLADEG 688
>gi|239815901|ref|YP_002944811.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Variovorax paradoxus
S110]
gi|239802478|gb|ACS19545.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Variovorax paradoxus
S110]
Length = 701
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 256/710 (36%), Positives = 390/710 (54%), Gaps = 35/710 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA+IT+ NPPVN L G+ D +A + D VKAIV+TG G FSGG DI F
Sbjct: 11 VAVITMTNPPVNGLGFSTRIGITDGLAKANADDAVKAIVITGAGKAFSGGADIKEF---- 66
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G + + ++ V+ +E KPIVAA+ + +GGGLELA+GCH R+AAP T + LP
Sbjct: 67 --GTPKALQEPNLLSVILALEASPKPIVAAIHSVCMGGGLELALGCHYRVAAPGTSIALP 124
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSE-----EGWKLGLIDAVVTS-EE 185
E+ LG+IPG TQRLPR++G+ A+ M++ +S+ SE G KL D + S E
Sbjct: 125 EVKLGLIPGAGGTQRLPRVLGVETALNMIVSGESVKSELLAGLPGQKL--FDKLAASPES 182
Query: 186 LLKVSRLWALDIAARRK---PWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQ 242
+ + + +A +A + P +R+L G + A+ + N P
Sbjct: 183 VFEEALAFAKSVAGKTGDALPLVRNLPCKHPQGD-----AYFQFAKNMVGGMSKNYPAPL 237
Query: 243 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 302
C+D ++ G+ +E ++F L+ S L H+F A+RA SK+P+V + K
Sbjct: 238 KCVDAVQAATKMKFDEGMAEERRIFTALMFTPESLALRHLFMAERAASKIPDVPEDTPK- 296
Query: 303 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 362
R V+ V VIG G MG GI+ + I V + E+ E L +GI TI+ N V +GKL
Sbjct: 297 REVKSVGVIGAGTMGGGISMNFLNAGIPVKILEMKQEALDRGIATIKKNYESQVKKGKLK 356
Query: 363 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 422
QDK + +L LDY++ KD D++IEAV E + +K+K+F EL++ ILA+NTST
Sbjct: 357 QDKYEQRMALLSTTLDYNDLKDADLIIEAVFEELGVKEKVFKELDRVAKKGAILASNTST 416
Query: 423 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 482
+D++ + T ++G HFFSPA+VM LLE+VR + TS V+ +M +GK IKK VV
Sbjct: 417 LDVDKIAAFTQRPQDVVGMHFFSPANVMKLLEVVRGKATSKDVLATVMDIGKKIKKTAVV 476
Query: 483 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAA 542
G C GF NR YS+ A L+ G ++D A+ FG +GPF++ DLAG + A
Sbjct: 477 SGVCDGFIGNRMIEQYSRQAGFLLDEGATPQQVDKAVEKFGFAMGPFRMGDLAGNDIGWA 536
Query: 543 TSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVLPIIEECR 601
K PD + S D L + GR G+ G G Y Y+ G + P V +IE+ R
Sbjct: 537 IRKRRAVEHPDMKY-SRTADKLCELGRFGQKTGAGWYDYQAGKRDAIPSELVNKMIEDHR 595
Query: 602 RLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYR 661
+ I P ++++EIV+ +++ +VNE +LE+GI ++ D+D + G FP +R
Sbjct: 596 KELGIT----PRKISDEEIVQRLVYALVNEGAHILEDGIASKSGDIDMVYLTGYGFPVWR 651
Query: 662 GGIVFWADAVGANYVYTSLKKWSQL---YGNFFKPSRFLEERATKGIPLS 708
GG + +A VG V ++K++++ F++P+ +++ +G S
Sbjct: 652 GGPMHYASQVGLYNVAETMKRFAKNPRDDAEFWQPAPLIQKLVAEGKQFS 701
>gi|374294040|ref|YP_005041063.1| Enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Azospirillum
lipoferum 4B]
gi|357427443|emb|CBS90387.1| Enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Azospirillum
lipoferum 4B]
Length = 707
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 261/702 (37%), Positives = 383/702 (54%), Gaps = 28/702 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
V +IT+ PPVNA+ + +GL E + + +A++L G F G DI F
Sbjct: 23 VGVITVDYPPVNAVGHGVRSGLVAALEAGLADAEAEALLLVCAGRTFMAGADIREF---- 78
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G S P ++ VV ++ KP++AA+ G ALGGGLE+A+ CH R+A +LGLP
Sbjct: 79 --GKPSAPP--TLPEVVARLDASTKPVIAAIHGTALGGGLEVALACHLRVALKSAKLGLP 134
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVS- 190
E+ LG++PG TQRLPRLVG +KA++M+L + EE +GL+DAV L+
Sbjct: 135 EVKLGLLPGAGGTQRLPRLVGAAKALDMILSGDPVGGEEALTIGLVDAVEDDVSPLEAGL 194
Query: 191 RLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 250
R +A R P S RTD++ A K A L ++ P + +D +E
Sbjct: 195 RTADRLLADGRMPEPVS-ARTDRIAGTDPALFTAKRAELAKRQ--PQLFSPHRIVDAVEA 251
Query: 251 GIVHGGYSGVLKEAKVFKELVMLDTSR--GLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 308
+ G +E ++F L +D+ + GL+H FFA+R +KVP + G R +RKV
Sbjct: 252 AVTLPFAEGTARERELF--LACMDSPQRAGLIHAFFAEREVAKVPGLP-AGTPTREIRKV 308
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
VIG G MG GIA I VVL + E L +G I N +G+LT +
Sbjct: 309 GVIGAGTMGGGIAMCFANAGIPVVLVDSAQEALDRGTAAIRRNYEATARKGRLTAAQVEE 368
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
+ +++ L Y + D D+V+EA ES+ +K+ IF L+ C P ILATNTST+D++ +
Sbjct: 369 RMALIRPTLSYGDLADADLVVEAAFESMEVKRTIFRTLDDTCKPGAILATNTSTLDVDAI 428
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
T ++G HFFSPA+VM LLE+VR RTS V+ +M + + I KV V VG C G
Sbjct: 429 AAATGRPQDVLGMHFFSPANVMRLLEVVRGARTSDTVLATVMGLARRIGKVGVAVGVCYG 488
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR + + LV G ++D + FG P+G F + DLAG V +E
Sbjct: 489 FVGNRILHQRGRESMALVEEGASPEQVDRVLTEFGFPLGHFSMTDLAGIDVGWRIREERR 548
Query: 549 KAFPDRSFQSP-LVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNI 606
KA D Q+P +D+L + GR G+ G+Y YE GS+ P PDP V +IEE RR I
Sbjct: 549 KAG-DPEAQAPNWLDVLAERGRYGQKTSAGVYRYEPGSRTPIPDPEVAAVIEEDRRNRGI 607
Query: 607 MPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVF 666
P +V+++E+ E L+ +VNE+ ++LEEGI R D+D + G FPS+RGG++F
Sbjct: 608 ----APRAVSDEEVRERCLYVMVNEAAKILEEGIAARPVDIDAIWLHGYGFPSWRGGLLF 663
Query: 667 WADAVGANYVYTSLKKWSQ-LYGNFFKPSRFLEERATKGIPL 707
WAD G + S++++ + + G ++PS L +RA G P+
Sbjct: 664 WADREGLGKIAASVQRYHRDIGGPQWRPSALLLQRAADGQPI 705
>gi|407695494|ref|YP_006820282.1| 3-hydroxyacyl-CoA dehydrogenase [Alcanivorax dieselolei B5]
gi|407252832|gb|AFT69939.1| 3-hydroxyacyl-CoA dehydrogenase [Alcanivorax dieselolei B5]
Length = 694
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 256/697 (36%), Positives = 385/697 (55%), Gaps = 27/697 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+ +I++ PPVNAL + GL+ E + D KA+V+ G G F G DI F K
Sbjct: 13 IGVISVNYPPVNALGQGVREGLQSCLREGLADDQAKALVVIGEGRTFPAGADIREFGKPP 72
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
+PDV +N E +K ++AA+ G ALGGGLE+A+GC R+A ++GLP
Sbjct: 73 AG---PALPDV-----INEYESSEKLVIAAIHGTALGGGLEVALGCDYRVALDSAKVGLP 124
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 191
E+ LG++PG TQRLPRLVG A++M++ + ++ ++G++D VV+ + LL+ +
Sbjct: 125 EVKLGLLPGAGGTQRLPRLVGAKAALDMIVGGNPVKAKNALQMGIVDDVVSGD-LLEGAL 183
Query: 192 LWALDIAARRKPW--IRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
+A + A + P IR L + L + E +AR Q AP C+ ++
Sbjct: 184 AYARKLVADKAPLRRIRDLDVQTEEADLFASYE-KSIARKQRGFKAPFH-----CIKAVQ 237
Query: 250 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 309
+ G+ +E ++F EL++ S HVFFA+R +KVP + K R V VA
Sbjct: 238 AAVELPFEEGMKRERELFGELLVSSESAAQRHVFFAEREVAKVPGLPKDTPK-REVNSVA 296
Query: 310 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 369
VIG G MG GIA I V + EV E L KGI I N +G+LTQ++
Sbjct: 297 VIGAGTMGGGIAMNFANAGIPVKILEVKEEALEKGIAIIRKNYENTAKKGRLTQEQVEQR 356
Query: 370 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 429
+ +++ L Y + DVD+VIEAV E++ +K+ +F+EL++ C P ILATNTST+D+N +
Sbjct: 357 MALIQPTLSYDDLGDVDVVIEAVFENMSVKEAVFNELDRVCKPGAILATNTSTLDVNRIA 416
Query: 430 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 489
T +IG HFFSPA+VM LLE VR E+T+ VI +M + + I KV V+VG C GF
Sbjct: 417 SFTKRPQDVIGMHFFSPANVMKLLENVRGEKTADDVIATVMDLSRRIGKVGVLVGVCHGF 476
Query: 490 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDK 549
NR A LV+ G + ++D + G P+GPF + DLAG V +E K
Sbjct: 477 VGNRMLHKRQAEAVQLVNEGANPAQVDKVLFDLGFPMGPFAMSDLAGMDVGYRIREELRK 536
Query: 550 AFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIMP 608
P+ + D L+++GR G+ G++ Y++G + P P V II + R + I
Sbjct: 537 ENPENAPARNWTDELVENGRMGQKTQAGVFDYKEGDRTPVPSAEVDKIIAKFREENGIAT 596
Query: 609 GGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWA 668
VT++EI+E ++ +VNE ++LEEGI R D+D + G FP YRGG++FWA
Sbjct: 597 R----EVTDQEILERCMYVMVNEGAKILEEGIAARPLDVDVIWIYGYGFPVYRGGVLFWA 652
Query: 669 DAVGANYVYTSLKKWSQLYG-NFFKPSRFLEERATKG 704
D VG +Y + ++ Q G + +KP+ LE+ A +G
Sbjct: 653 DQVGLKAIYDKVSQFHQETGDDVWKPAPLLEKLAKEG 689
>gi|408373582|ref|ZP_11171277.1| fatty oxidation complex alpha subunit [Alcanivorax hongdengensis
A-11-3]
gi|407766509|gb|EKF74951.1| fatty oxidation complex alpha subunit [Alcanivorax hongdengensis
A-11-3]
Length = 696
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 253/697 (36%), Positives = 388/697 (55%), Gaps = 28/697 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+ II + PPVNAL + GL+ EA + D ++A+++ G G F G DI F K
Sbjct: 13 IGIIRIDYPPVNALGHGVRTGLQSCLREAMADDSLQAVIVIGEGKTFPAGADIREFGK-- 70
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
P S+ V+N E K +VAA+ G ALGGGLE+A+GC R+A +LGLP
Sbjct: 71 -----PPQPP-SLPEVINEYEASDKLVVAAIHGTALGGGLEVALGCDYRVALDSARLGLP 124
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL---LK 188
E+ LG++PG TQRLPRLVG +A++M++ K + + + +LGL+D VV+ + L L
Sbjct: 125 EVNLGLLPGAGGTQRLPRLVGARQALDMIVGGKPVKAAQARELGLVDDVVSGDLLDGALA 184
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 248
+R D A RR+ IR + G+ + +AR Q AP +C+ +
Sbjct: 185 FTRRLLADRAPRRR--IREMDVPGDTGAELFSEFEQSIARKQRGFKAPF-----SCIKAV 237
Query: 249 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 308
+ + G+ +E ++F +L++ S HVFFA+R +KVP + D R ++ V
Sbjct: 238 QAAVELPFDQGIERERELFFKLLISPESAAQRHVFFAEREVAKVPGL-DKTTPKRDIQTV 296
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
AVIG G MG GIA I V L EV + L KG+ I N + +G+++ ++
Sbjct: 297 AVIGAGTMGGGIAMNFANAGIPVKLLEVKQDALDKGLAIIRRNYQNTAKKGRISAEQVEQ 356
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
+ +++ L Y E DVD+VIEAV E++ +K+ +F+EL++ C P ILATNTST+D+N +
Sbjct: 357 RMALIQPTLSYDELGDVDLVIEAVFENMDVKKAVFTELDRVCKPGAILATNTSTLDVNRI 416
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
T ++G HFFSPA+VM LLE VR ++T+ VI +M + + I KV V+VG C G
Sbjct: 417 AAFTGRPQDVMGMHFFSPANVMRLLENVRGDKTADDVIATVMDLSRRIGKVGVLVGVCHG 476
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR A LV+ G ++D + G P+GPF + DLAG V +E
Sbjct: 477 FVGNRMLHKRQAEAVQLVNEGASPQQVDKVLFDLGFPMGPFAMSDLAGMDVGYRIREELR 536
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIM 607
K PD + D L+++GR G+ G++ Y++G + P P P V IIE+ RR + I
Sbjct: 537 KDDPDNAPPRNWTDELVEAGRLGQKTRAGVFDYQEGDRTPIPSPDVDAIIEKYRRDNGIT 596
Query: 608 PGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFW 667
P ++++EI+E ++ +VNE ++LEEGI R D+D + G FP YRGG++FW
Sbjct: 597 PR----HISDQEILERCMYVMVNEGAKILEEGIAARPLDVDVIWIYGYGFPVYRGGVLFW 652
Query: 668 ADAVGANYVYTSLKK-WSQLYGNFFKPSRFLEERATK 703
AD VG ++ + + + Q + +KP++ L + A +
Sbjct: 653 ADQVGVKTIFDKVNEIYQQTGSDVWKPAQLLTDLAEQ 689
>gi|186475793|ref|YP_001857263.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia phymatum STM815]
gi|184192252|gb|ACC70217.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia phymatum
STM815]
Length = 694
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 256/697 (36%), Positives = 383/697 (54%), Gaps = 19/697 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+DG+A+ITL NPPVN L + G+ + + A VKAIVLTG G FSGG DI F
Sbjct: 8 HDGIAVITLNNPPVNGLGLSTRMGIVEGIDRAQHDPAVKAIVLTGAGKAFSGGADITEFN 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ ++ V+ +E KP+VAA+ +A+GGGLELA+G H R+AAP Q+
Sbjct: 68 TPKA------FQEPTLATVIKAVEGSAKPVVAAIHSVAMGGGLELALGAHYRVAAPGAQI 121
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
LPE+ LG++PG TQRLPR +GL A+ M++ + SE+ + D +V LL+
Sbjct: 122 ALPEVKLGILPGAGGTQRLPRALGLEAALNMIVSGTPVMSEKLAGTPMFDQMVEGN-LLE 180
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 248
+ +A + A+ P + R +G A ++ AR A P C+D I
Sbjct: 181 DALAFARKVGAQSGPHPKIRDRN--IGH-PNAAGFIQFARNSVAGVAKQYPAPHKCIDAI 237
Query: 249 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 308
E G++ G GV E + F LV S+ L H FF +RA SK+P+V R + KV
Sbjct: 238 EAGVLKGFDHGVKVERECFLALVQTPESKALRHAFFGERAASKIPDVPS-DTPARNIDKV 296
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
VIG G MG GIA + + V L E+ + L +G+ TI N V +GKLT +
Sbjct: 297 GVIGAGTMGGGIAMNFVNAGLPVTLLEMKQDALERGLATIRKNYEATVKKGKLTMEALEQ 356
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
+ ++ L Y D D++IEAV E + +K+++F+ L++ P ILA+NTST+DLN +
Sbjct: 357 RMSLITPTLTYEALGDADLIIEAVYEELGVKEQVFTRLDEVAKPGAILASNTSTLDLNKI 416
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
T ++G HFFSPA+VM LLE+VR + T+ V+ +M V K I+K VV G C G
Sbjct: 417 AAFTKRPQDVVGMHFFSPANVMKLLEVVRGKDTAKDVLATVMQVAKKIRKTAVVSGVCDG 476
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR Y + A ++ G ++D AI FG +GPF++ DLAG + A K
Sbjct: 477 FIGNRMVEQYVRQALFMLEEGALPAQVDKAIEKFGFAMGPFRMSDLAGNDIGWAIRKRRY 536
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMP 608
+ P + S + D L ++GR G+ G G Y Y+ G + PS PI E S +
Sbjct: 537 QEEPHMRY-SKIADRLCEAGRFGQKTGGGWYDYKAGDR-NAYPS-KPIDEMIVAHSKEL- 592
Query: 609 GGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWA 668
G + +++ EIVE ++F +VNE ++LEEGI +ASD+D + G FP +RGG + +A
Sbjct: 593 GIERRKISDDEIVERLVFALVNEGAKILEEGIASKASDIDMVYLTGYGFPLWRGGPMLYA 652
Query: 669 DAVGANYVYTSLKKW-SQLYGNFFKPSRFLEERATKG 704
D+VG V +++++ +Q G+ ++ + + ERA +G
Sbjct: 653 DSVGLYNVERAIRRYAAQPNGDAWQIAAGIVERAAQG 689
>gi|399546209|ref|YP_006559517.1| peroxisomal bifunctional enzyme [Marinobacter sp. BSs20148]
gi|399161541|gb|AFP32104.1| Peroxisomal bifunctional enzyme [Marinobacter sp. BSs20148]
Length = 697
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 251/695 (36%), Positives = 380/695 (54%), Gaps = 21/695 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+ +IT+ PPVNAL+ + +GL E+ + K ++L G F G DI F K
Sbjct: 13 IGVITVNYPPVNALSHAVRSGLIAALEQGQEDSEAKVLLLVCEGRTFIAGADIREFGKP- 71
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
M + +V E+ +KP+VAA+ G ALGGGLE+A+GCH R+A ++GLP
Sbjct: 72 -------MQKPGLAELVETYENSEKPLVAAIHGTALGGGLEMALGCHYRVALNSAKIGLP 124
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 191
E+ LG++PG TQRLPRL G KA+E++ + + +++ LG++D V E++
Sbjct: 125 EVKLGLLPGAGGTQRLPRLTGAQKALEIITSGEFVGAKDALALGILDVVDDGEDVKAAGL 184
Query: 192 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 251
+A IA KP R DK+ + + +V R +K A C+D IE
Sbjct: 185 AYAQQIADEGKPVRRVCDLKDKIAA-DKGSDVFDQFRAVLQKKARGQFSPFKCVDAIEAA 243
Query: 252 IVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVI 311
G+ +E ++F E + G +H FFA+R SKV ++ R V V +I
Sbjct: 244 FDLPFAEGMKRERELFTECMDSPQRAGQIHSFFAEREVSKVKGLSK-DTPVRDVNSVGII 302
Query: 312 GGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALK 371
G G MG GIA I V++ E+ E L KG+ I N +G+LTQ + + +
Sbjct: 303 GAGTMGGGIAMNFANVGIPVIIVEMKQEALDKGLGIIRKNYENSAKKGRLTQQQVEDRIA 362
Query: 372 MLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEK 431
++ G L Y +FK VD+VIEAV E++ +K++IF++L+ C P ILA+NTST+D++ +
Sbjct: 363 LITGSLSYDDFKSVDLVIEAVFENMAVKKEIFAKLDAICKPGTILASNTSTLDVDEIASA 422
Query: 432 TSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAV 491
T + ++G HFFSPA+VM LLE VR +TS +V +M V K IKKV V+VGNC GF
Sbjct: 423 TRRPEDVVGMHFFSPANVMKLLENVRGSKTSDEVKATVMAVAKKIKKVGVLVGNCHGFVG 482
Query: 492 NRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAF 551
NR A LV+ G ++D + G P+G F + DLAG V +E A
Sbjct: 483 NRMLHRRGAEAMTLVNEGATPQQVDKVLTDLGYPMGQFAMSDLAGIDVGYRIREERRNA- 541
Query: 552 PDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGG 610
+D L + R G+ G+Y YE+GS+ P PDP V IIE+ R+ +I
Sbjct: 542 -GEQVAPSWMDKLAEQNRLGQKTMAGVYKYEEGSRNPVPDPEVERIIEDFRKEQDI---- 596
Query: 611 KPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADA 670
+T++EI+E ++ +VNE+ ++LEEGI RA D+D + G FP+YRGG +FWAD
Sbjct: 597 SSREITDQEILERCMYVMVNEAAKILEEGIADRALDIDVVWIYGYGFPAYRGGPMFWADQ 656
Query: 671 VGANYVYTSLKKW-SQLYGNFFKPSRFLEERATKG 704
VG + + +++K+ + + G +KP+ L++ G
Sbjct: 657 VGLDVILAAVEKYHADVGGEQWKPADLLKQLVADG 691
>gi|421745980|ref|ZP_16183806.1| 3-hydroxyacyl-CoA dehydrogenase [Cupriavidus necator HPC(L)]
gi|409775497|gb|EKN56977.1| 3-hydroxyacyl-CoA dehydrogenase [Cupriavidus necator HPC(L)]
Length = 693
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 258/700 (36%), Positives = 382/700 (54%), Gaps = 26/700 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DG+A+ITL NPPVN L G+ + A VKA+V+TG G FSGG DI F
Sbjct: 8 QDGIAVITLDNPPVNGLGHSTRLGIVEGMTRALDDAAVKAVVITGAGKAFSGGADIREFN 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ +L V+ +IE+ KP+VAAV +A+GGGLELA+GC+ R+A+ Q+
Sbjct: 68 TPKATQEPTLHS------VIKVIENSTKPVVAAVHSVAMGGGLELALGCNYRVASKGAQI 121
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
LPE+ LG++PG TQRLPR++GL A+ M++ + SE+ L D +V + +L
Sbjct: 122 ALPEVKLGILPGAGGTQRLPRVIGLEAALNMIVTGNPVLSEKFAGTKLFDEIVDGD-VLP 180
Query: 189 VSRLWALDIAARR--KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLD 246
+ +A ++ A P +R L + A L A+ A N P C++
Sbjct: 181 AAIAFARNVGAASGPHPKVRDLKVRHE-----NAEGFLAFAKNTVAAVAKNFPAPGKCVE 235
Query: 247 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 306
+ + G+ E + F LV SR L H FF +RA SK+P+V R +
Sbjct: 236 AVAASLKPFD-EGLRLEREGFMFLVNTPESRALRHAFFGERAASKIPDVPS-DTPTRKIE 293
Query: 307 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 366
KVAVIG G MG GI+ + I V + E E L +G+ TI N +GKLTQ+K
Sbjct: 294 KVAVIGAGTMGGGISMNFLNAGIPVTVLETKQEALDRGVATIRRNYENSAKKGKLTQEKV 353
Query: 367 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 426
+ +L L Y + KD D++IEAV E + +K+ +F +L++ P ILA+NTST+D+N
Sbjct: 354 EQRMGLLSTTLSYDDIKDADLIIEAVFEEMGVKETVFKKLDEVAKPGAILASNTSTLDVN 413
Query: 427 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 486
+ T ++G HFFSPA+VM LLE+VR ++T V+ +M V K IKK VV G C
Sbjct: 414 KIASFTRRPQDVVGMHFFSPANVMKLLEVVRGDKTGKDVLATVMQVAKKIKKTAVVSGVC 473
Query: 487 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKE 546
GF NR YS+ A L+ G ++D AI FG +GPF++ DLAG + A K
Sbjct: 474 DGFIGNRMIEQYSRQAGYLLDEGALPEQVDKAIEKFGFAMGPFRMGDLAGNDIGWAIRKR 533
Query: 547 FDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGS-KPKPDPSVLPIIEECRRLSN 605
PD + S DLL + GR G+ G G Y Y+ G KP P+ V +I + +
Sbjct: 534 RAVEKPDIQY-SKTADLLCEMGRFGQKTGAGWYDYKPGDRKPYPNQQVNEMIVQHSKDLG 592
Query: 606 IMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIV 665
I ++++EIVE +++ +VNE ++LEEGI +ASD+D + G FP +RGG +
Sbjct: 593 IT----RRKISDEEIVERLVYALVNEGAKILEEGIASKASDIDMVYLTGYGFPLHRGGPM 648
Query: 666 FWADAVGANYVYTSLKKWSQLY-GNFFKPSRFLEERATKG 704
+AD VG V S++++++ Y G ++P+ L++ A +G
Sbjct: 649 LYADQVGLYNVLLSMQRYAKGYHGEAWEPAPLLKKLAAEG 688
>gi|410612368|ref|ZP_11323447.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola psychrophila 170]
gi|410168108|dbj|GAC37336.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola psychrophila 170]
Length = 714
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 259/702 (36%), Positives = 393/702 (55%), Gaps = 32/702 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA++ + NPPVNAL+ + GL A + + V+ IV++ FSGG DI+ F
Sbjct: 27 VAVLWMQNPPVNALSKSVRVGLIKHLNAAIADESVQVIVISSKQSLFSGGADISEFS--- 83
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
GD L P++ V+++IE+ KP+VA + G A GGGLE+A+ CH R+ ++GLP
Sbjct: 84 -GGD--LEPNLPA--VLDVIENSPKPVVAVLNGPAFGGGLEVALSCHYRLTFASNKVGLP 138
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKL-GLIDAVVTSEELLKVS 190
E+ LG++PG TQRLPRL G+ +A++M++ + + ++ KL G+ D VV S E L S
Sbjct: 139 EVNLGILPGAGGTQRLPRLAGVQQALDMIVSGRPVAAD---KLPGVFDVVVDSPETLLTS 195
Query: 191 RLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 250
L + +R K+ S +E+ R A + C+ +E
Sbjct: 196 ALAFCEKVIADGSKVRKTCDV-KIDVSSAPKELFAQYRQGLATKARGFFAPERCIQAVEA 254
Query: 251 GIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAV 310
+ G+++E ++F E + +R H FFA+RA S V + D R +++V +
Sbjct: 255 SVELPFAQGLIREGELFMECMRSKEARAQQHFFFAERAASHVKDF-DKETPVRDIKQVGI 313
Query: 311 IGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNAL 370
IG G MG GIA I V++ E+ + L KG+ I N +GKLT + + +
Sbjct: 314 IGAGTMGGGIAMNFANAGIPVIMLELKQDALDKGLALIRKNYENSAKKGKLTAQQVEDRM 373
Query: 371 KMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGE 430
+L G +Y+ +VD+VIEAV E + +KQ++F L+ C P ILA+NTST+D++ +GE
Sbjct: 374 GLLTGSTEYAALCNVDLVIEAVFEKMSVKQEVFKALDAVCKPGAILASNTSTLDIDEIGE 433
Query: 431 KTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFA 490
T + +IG HFFSPA+VM LLE+V+T +TS +VI M + K I KV V+VG C GF
Sbjct: 434 ATKRPEDVIGLHFFSPANVMKLLEVVKTSKTSPEVIKTTMKMAKKINKVAVLVGVCFGFV 493
Query: 491 VNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAA---ATSKEF 547
NR Y + A ++ G ID I FGLP+GPF + D+AG + A + +EF
Sbjct: 494 GNRMIEGYGREANRMMLEGGTPEHIDKVIYDFGLPMGPFTMGDMAGQDIGAFVRESRREF 553
Query: 548 DKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGS-KPKPDPSVLPIIEECRRLSNI 606
K P L D L++ GR G GKG+Y YE GS KP PDPSVL E ++++
Sbjct: 554 IKHDPSYCI---LADKLVEQGRVGLKVGKGVYLYEAGSRKPIPDPSVL---ELAKQVAAD 607
Query: 607 MPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVF 666
+ G ++++EI+E I+FP++NE +LEEGI ++SD+D V G FP YRGG +
Sbjct: 608 L-GVAQRDISDQEIIERIIFPMINEGALILEEGIAAKSSDIDVIYVYGYGFPVYRGGPMQ 666
Query: 667 WADAVGANYVYTSLKKWSQLYG----NFFKPSRFLEERATKG 704
+AD +G VY ++ K+ G N+F+P+ L++ A +G
Sbjct: 667 YADEIGLKTVYDAMCKYRDELGEHGKNWFEPAPLLKKLAEQG 708
>gi|330808852|ref|YP_004353314.1| multifunctional fatty acid oxidation complex [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|327376960|gb|AEA68310.1| putative multifunctional fatty acid oxidation complex [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
Length = 703
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 254/703 (36%), Positives = 382/703 (54%), Gaps = 31/703 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA+IT+ NPPVNAL + + D A + V IVL G G F G DI F K
Sbjct: 15 VAVITVNNPPVNALTPGMRGSIIDAVAHANADPAVAVIVLMGAGQNFIAGADIRQFGKAR 74
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
++ + ++ KP VAA+ G ALGGGLE A+ CH RIA +LGLP
Sbjct: 75 ---------TITTRMSAAALDASAKPTVAAIHGYALGGGLEHALACHYRIALSAAKLGLP 125
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVV---TSEELLK 188
E+ LG+IPG TQRLPRLVG + A ++++ S+ + + E K+GLI +V S+EL
Sbjct: 126 EVALGLIPGGGGTQRLPRLVGAAVATDLLVSSRHVQAPEALKIGLISQIVPGTQSQELRD 185
Query: 189 VSRLWALDIAARRKPWIRSL--HRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLD 246
+ +A +A + +R L D + +VL+ AR A K + + Q +D
Sbjct: 186 AAVSYAKAVAHAQPQRVRDLVLEPMD-----ATTMDVLQAARRAAAKKSAHNKAPQYAID 240
Query: 247 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 306
IE + E+++F EL D ++ L + FFA+R +KVP+ G KP GV
Sbjct: 241 CIEAAFSLPFDEALEVESRLFSELEGSDVAKALRYAFFAEREAAKVPDAPP-GFKPAGVT 299
Query: 307 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 366
AVIG G MG+GIA I V L E ++E L +G++ I V RG++T +
Sbjct: 300 CAAVIGAGTMGAGIAICFADAGIVVKLLEASAEALDRGLQRIRDIYAAKVKRGRMTVQEM 359
Query: 367 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 426
+ L+ ++ V Y E D D+V+EAV E + LK+ +F++L+ P +L TN+S ID+N
Sbjct: 360 DACLQFVQPVCHYEEIGDCDVVVEAVFERIDLKKDVFTKLDAVMKPGALLLTNSSAIDIN 419
Query: 427 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 486
++ T + GAHFF+PA+ M L EIV+ ++TS + ++ M +G+ +KKV V G C
Sbjct: 420 VMANMTGRPQNVAGAHFFAPANAMKLCEIVKGDQTSIETVVRAMKMGRDLKKVCAVSGTC 479
Query: 487 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKE 546
GFA NR+ P LL+ G +ID + FG P+GPF + DL+G V+ T K
Sbjct: 480 DGFAANRSRAPLVTEMMLLLEEGARPEQIDRVMVEFGYPMGPFAVSDLSGLDVSYDTRKR 539
Query: 547 FDKAFPD-RSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLS 604
A P R P D +++ GR G+ NG G Y YE+G + P+ D V+ II
Sbjct: 540 RAAADPQYRKLHVP--DRMVELGRKGQKNGAGWYRYEEGDRTPRHDEEVMRIIATVAH-- 595
Query: 605 NIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGI 664
G + T+ EI++ +LF +NE+C++L+EG RASD+D + G FP +RGG+
Sbjct: 596 --ELGTPQRTFTDSEILKRLLFASINEACKILDEGKAYRASDIDVMWLYGFGFPRHRGGL 653
Query: 665 VFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPL 707
++WAD +GA ++ +++W + YG + PS L + +G+ L
Sbjct: 654 LYWADTIGAKEIHLQVQQWHEQYGRRWTPSPLLSKAGNEGLSL 696
>gi|410635272|ref|ZP_11345887.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola lipolytica E3]
gi|410145245|dbj|GAC13092.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola lipolytica E3]
Length = 706
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 263/721 (36%), Positives = 398/721 (55%), Gaps = 40/721 (5%)
Query: 1 MAAPRVTMEVG-NDG-VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNG 58
M+A + T+ V N G A+I + N PVNAL+ + GL + E A + +VK IV++
Sbjct: 1 MSAEQSTVVVSQNQGETALIMMQNAPVNALSKAVRVGLIAEIEAALNNANVKVIVISSQL 60
Query: 59 GRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAM 118
G FSGG DI+ F + L P++ V++LIE+ KP+VA + G A GGGLELA+
Sbjct: 61 GLFSGGADISEFSSGN------LQPNLPE--VLDLIENANKPVVAVLNGPAFGGGLELAL 112
Query: 119 GCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLG 175
CH RI+ ++GLPE+ LG++PG TQRLPRL G+++A++M++ K + + G
Sbjct: 113 ACHYRISFADNKVGLPEVNLGILPGAGGTQRLPRLTGVAQALDMIVSGKPVKA--AALNG 170
Query: 176 LIDAVVT------SEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARL 229
+ D +V SE V++L +R I ++ + + E+ R
Sbjct: 171 VFDLIVDDPAKLMSESQAFVAQLINDGCEIKRVKDI-------EIDTETAPSELFSQYRQ 223
Query: 230 QAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRAT 289
K A + C+ +E + G+ KEA++F E + +R H FFA++A
Sbjct: 224 GIAKQARGFFSPERCIQAVEAAVTLPLKDGLQKEAELFMECMRSPQARAQQHFFFAEKAA 283
Query: 290 SKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIE 349
V + D R ++ V +IG G MG GIA I VV+ E+ +E L KG+ I
Sbjct: 284 GHVSDY-DKSTPVRDIKSVGIIGAGTMGGGIAMNFANAGIPVVMLELKAEALEKGLGVIR 342
Query: 350 ANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKA 409
N +GKL+Q + + +L G +YS DVD+VIEAV E + +K+++F++L+
Sbjct: 343 RNYENSAKKGKLSQQDLEDRMALLHGTTEYSGLADVDLVIEAVFEKMDVKKQVFTQLDAI 402
Query: 410 CPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDL 469
C ILA+NTST+D+N + + TS + +IG HFFSPA+VM LLE+V+ E+TSA VI
Sbjct: 403 CKKGAILASNTSTLDINEIADCTSRPEDVIGLHFFSPANVMKLLEVVKGEKTSADVIKTS 462
Query: 470 MTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 529
M + K I+KV V+VG C GF NR PY + A ++ G D +D I FGLP+GPF
Sbjct: 463 MQLAKKIRKVAVLVGVCFGFVGNRMIEPYGREANRMMLEGADPEHVDRVIYDFGLPMGPF 522
Query: 530 QLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGS-KPK 588
+ D+AG + + + + + D L+K GR G GKG+Y YE G+ KP
Sbjct: 523 TMGDMAGLDIGYFVRQSRKEHIAHDPSYAVVADRLVKDGRAGLKVGKGVYLYEAGNRKPI 582
Query: 589 PDPSVLPII-EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDL 647
PDP+V I EE +L G KP +++EI+E +F ++NE +LEEGI ++SD+
Sbjct: 583 PDPTVAQIAKEEAEKL-----GVKPRKHSDEEILERCIFTLINEGAHILEEGIAAKSSDI 637
Query: 648 DDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF----FKPSRFLEERATK 703
D V G FP +RGG + +AD VG + VY ++ K+ G + F+P+ L+ A +
Sbjct: 638 DVIYVYGYGFPVFRGGPMQYADEVGLDKVYAAMCKYRDELGEYGKAWFEPAPLLKRLAEQ 697
Query: 704 G 704
G
Sbjct: 698 G 698
>gi|301631451|ref|XP_002944811.1| PREDICTED: peroxisomal bifunctional enzyme-like [Xenopus (Silurana)
tropicalis]
Length = 735
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 267/715 (37%), Positives = 389/715 (54%), Gaps = 42/715 (5%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA+ITL NPPVN L + G+ E+A + VKAIV+TG GG FSGG DI F
Sbjct: 11 VAVITLANPPVNGLGLATRQGIVAGLEKAHADASVKAIVITGAGGAFSGGADIKEF---- 66
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G M + + V+N +E KP+VAA+ + +GGGLELA+GCH R+AAP + LP
Sbjct: 67 --GTDKAMAEPHLHTVINAVEHSAKPVVAAIHSVCMGGGLELALGCHYRVAAPGCSIALP 124
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSE-----EGWKLGLIDAVVTS--- 183
E+ LG++PG TQRLPR++G+ A+ M++ +++ SE G KL D + S
Sbjct: 125 EVKLGILPGAGGTQRLPRVLGVEAALNMIVSGETVQSEFIGAVPGQKL--FDKMAASPAS 182
Query: 184 --EELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 241
EE L +R A AR P +R+L E + AR K A N+P
Sbjct: 183 LPEEALAFARSVA---DARPLPLVRNLPCQH-----PEGDAYFQFARNMVKGMAKNVPAP 234
Query: 242 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 301
C+D +E G+ E ++F L+ SR L H+F A+RA SK+ +V +
Sbjct: 235 AKCVDAVEAATRRKFTDGLAYERELFIHLMWTPESRALRHLFLAERAASKISDVPADTPR 294
Query: 302 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 361
R V+KV VIG G MG GI+ + I V + E+ E L +GI TI N V +GKL
Sbjct: 295 -RDVKKVGVIGAGTMGGGISMNFLNAGIPVTILEMQQEALERGIATIRKNYEAQVKKGKL 353
Query: 362 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 421
+DK + +L L Y + KD D++IEAV E++ +K+++F +L+ P ILA+NTS
Sbjct: 354 KEDKYQQRMALLSSTLSYDDLKDCDLIIEAVFENLSVKEQVFKQLDAVMKPGAILASNTS 413
Query: 422 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 481
T+D++ + T ++G HFFSPA+VM LLE+VR RT V+ +M + K I+KV V
Sbjct: 414 TLDVDKIAAFTQRPQDVVGLHFFSPANVMKLLEVVRGARTGKDVMATVMAMAKKIRKVAV 473
Query: 482 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAA 541
V G C GF NR Y + L+ G ++D AI FG +GPF++ DLAG +
Sbjct: 474 VSGVCDGFIGNRMIEQYGRQGGFLLDEGCTPAQVDKAIEKFGFAMGPFRMGDLAGNDIGW 533
Query: 542 ATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVLPIIEEC 600
A K + PD + S DLL + GR G+ G G Y Y + P V+ +IEE
Sbjct: 534 AIRKRRYQEKPDMKY-SKTADLLCEKGRFGQKTGAGWYDYAAARRDAIPSAEVVQMIEEH 592
Query: 601 RRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSY 660
R+ I P ++++EIV+ ++F +VNE+ +LEEGI +ASD+D + G FP +
Sbjct: 593 RKALGITPR----KISDEEIVQRLVFALVNEAAHILEEGIANKASDIDVVYIFGYGFPVH 648
Query: 661 RGGIVFWADAVGANYVYTSLKKWSQL---YGNFFKPSRFLEERATKGIPLSAPVS 712
RGG + +A+ VG V ++K+++Q F++P+ L +G S PV
Sbjct: 649 RGGPLNYANEVGLFNVAAAMKRFAQNPLDDARFWQPAPLLARLVAEG---SQPVQ 700
>gi|187923916|ref|YP_001895558.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia phytofirmans PsJN]
gi|187715110|gb|ACD16334.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia
phytofirmans PsJN]
Length = 694
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 248/678 (36%), Positives = 373/678 (55%), Gaps = 22/678 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+DGVA+ITL NPPVN L + AG+ + E A + +KAIVLTG G FSGG DI F
Sbjct: 8 HDGVAVITLNNPPVNGLGLSTRAGIVEGVERAQNDPAIKAIVLTGAGKAFSGGADITEFN 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ +L V+ ++E KP++AA+ +A+GGGLELA+G H RIAAP Q+
Sbjct: 68 TPKAGQEPTLA------TVIKIVEGSAKPVIAAIHSVAMGGGLELALGAHYRIAAPGAQI 121
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
LPE+ LG++PG TQRLPR +GL A+ M++ + SE+ GL D + + L +
Sbjct: 122 ALPEVKLGILPGAGGTQRLPRAIGLEAALNMIVSGAPVMSEKLADSGLFDELAQGD-LAE 180
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 248
+ +A ++A+ P + D+ A ++ AR A N P C+D +
Sbjct: 181 AALAFARKVSAKEGPHPKV---RDRKIEHPNAAGFIQFARNTVATMAKNFPAPLKCIDAV 237
Query: 249 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRK 307
E G+ G G+ E + F LV S L H FF +RA SK+P+V +D + R + +
Sbjct: 238 EAGVQKGFDKGLAFERECFMALVQTPESHALRHAFFGERAASKIPDVPSDTPV--RDIGQ 295
Query: 308 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 367
VAVIG G MG GIA I I V L E E L +G+ TI N V +GKL +
Sbjct: 296 VAVIGAGTMGGGIAMNFINAGIPVTLLETKQEALDRGLATIRKNYEATVKKGKLKPEVLG 355
Query: 368 NALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 427
+ ++ L Y + K+ D+++EAV E + +K++ F L++ ILA+NTST+D++
Sbjct: 356 QRMALITPTLSYDDLKNADLIVEAVFEELGVKEQAFKRLDEVAKQGAILASNTSTLDVDK 415
Query: 428 VGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 487
+ T ++G HFFSPA+VM LLE+VR + T+ V+ +M + K IKK VV G C
Sbjct: 416 IAAFTKRPQDVVGMHFFSPANVMKLLEVVRGKETAKDVLATVMNLAKKIKKTAVVSGVCD 475
Query: 488 GFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEF 547
GF NR Y + A ++ G ++D AI FG +GPF++ DLAG + A K
Sbjct: 476 GFIGNRMVEQYIRQALFMLEEGALPAQVDKAIEKFGFAMGPFRMSDLAGNDIGWAIRKRR 535
Query: 548 DKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVLPIIEECRRLSNI 606
PD + S + D L ++GR G+ G G Y Y+ G + P V +I + ++
Sbjct: 536 YLEHPDMHY-SKIADRLCETGRFGQKTGGGWYDYKAGDRTAYPSKVVDDMIVAFSKETDT 594
Query: 607 MPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVF 666
+ ++++EIVE ++F +VNE ++LEEGI +ASD+D + G FP YRGG +
Sbjct: 595 ----ERRKISDEEIVERLVFALVNEGAKILEEGIASKASDIDMVYLTGYGFPLYRGGPML 650
Query: 667 WADAVGANYVYTSLKKWS 684
+AD VG V ++++++
Sbjct: 651 YADTVGLYNVERAIRRYA 668
>gi|395762316|ref|ZP_10442985.1| 3-hydroxyacyl-CoA dehydrogenase [Janthinobacterium lividum PAMC
25724]
Length = 695
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 256/702 (36%), Positives = 383/702 (54%), Gaps = 28/702 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
N VA+ITL NPPVN L + +A + + VKAIV+TG G FSGG DI F
Sbjct: 8 NGAVAVITLANPPVNGLGLATRTAAVAGIRQALADEAVKAIVITGAGKAFSGGADIKEFN 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ + ++ ++N++E KP+VAA+ + +GGGLELA+GC+ R+AAP Q+
Sbjct: 68 SPKA------LTEPTLHTLINVVESASKPVVAAIHSVCMGGGLELALGCNYRVAAPGAQM 121
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT-SEELL 187
LPE+ LG++PG TQRLPR++GL A+ M++ + SE+ L D V +LL
Sbjct: 122 ALPEVKLGILPGAGGTQRLPRVLGLEMALNMIVSGTPVASEKLAGTALFDEVTAPGADLL 181
Query: 188 KVSRLWALDIA-ARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLD 246
+ + +A +A R P +R + D + L+ +R K + P C+D
Sbjct: 182 QAAVAFATKVADVRPLPTVRE-RKVDYPNHAA----FLQFSRNTVKAMSGPFPAPLKCVD 236
Query: 247 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGV 305
+ + G+ E ++F +LV S+ L H FFA+R SKVP+V +D + R +
Sbjct: 237 AVAAAVTMTFDEGLQYERELFMQLVQSPVSKALRHAFFAERLASKVPDVPSDTPV--RAI 294
Query: 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDK 365
A++G G MG+GIA I V L E E L KG+ TI N V +GKLTQ+K
Sbjct: 295 ASAAIVGAGTMGAGIAMNFANAGIAVTLLETRQEALDKGLATIRKNYENTVKKGKLTQEK 354
Query: 366 ANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL 425
A + ++ G L Y++ D+VIEAV E + +K+ +F +L+ P ILA+NTST+DL
Sbjct: 355 AEQRIALVSGTLAYADIAQADIVIEAVFEELAVKEAVFKQLDAVMKPGAILASNTSTLDL 414
Query: 426 NIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 485
+ + T +IG HFFSPA+VM LLEIVR +T V+ + + K +KK VV G
Sbjct: 415 DKIAAFTQRPQDVIGTHFFSPANVMKLLEIVRGAQTGKDVLATALALSKKLKKTGVVSGV 474
Query: 486 CTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSK 545
C GF NR YS+ A L+ G ++D A+ FG +GPF++ DLAG + A K
Sbjct: 475 CDGFIGNRMIEQYSRQAGFLLEEGCLPEQVDKAVEKFGFAMGPFRMGDLAGNDIGWAIRK 534
Query: 546 EFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGS-KPKPDPSV-LPIIEECRRL 603
P ++ S DLL + GR G+ G G Y Y+ G K P V I++ C +
Sbjct: 535 RRAVEKPAVTY-SKTADLLCELGRYGQKTGAGWYDYKAGDRKAYPSEQVNAMIVQHCADI 593
Query: 604 SNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGG 663
G V+++EIVE +++ +VNE R+LEEGI RASD+D + G FP +RGG
Sbjct: 594 -----GVARRKVSDQEIVERLVYALVNEGARILEEGIAQRASDIDMVYLTGYGFPLFRGG 648
Query: 664 IVFWADAVGANYVYTSLKKWSQ-LYGNFFKPSRFLEERATKG 704
+F+AD +G V ++ +++ +G+ + P+ L + A +G
Sbjct: 649 PMFYADTLGLPNVLDTIAAYAKGRHGDAWTPAPLLLKLAGEG 690
>gi|124266965|ref|YP_001020969.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
[Methylibium petroleiphilum PM1]
gi|124259740|gb|ABM94734.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
[Methylibium petroleiphilum PM1]
Length = 700
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 263/700 (37%), Positives = 373/700 (53%), Gaps = 29/700 (4%)
Query: 16 AIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHG 75
A+ITL NPPVN L + D A V+AIV+TG G FSGG DI F
Sbjct: 12 AVITLDNPPVNGLGHATRRDVADGLVRAQDDPAVQAIVITGAGRAFSGGADIREFDTPQA 71
Query: 76 AGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPE 135
+ +L+ ++ IE KP++AA+ + +GGGLELA+GCH R+AAP Q+ LPE
Sbjct: 72 MREPNLLS------LILAIEASGKPVIAALHTVCMGGGLELALGCHYRVAAPGCQVALPE 125
Query: 136 LTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKL---GLIDAVVTSEELLKV 189
+ +G+IPG TQRLPR++G+ A+ M+L + + SE L L D +V + +
Sbjct: 126 VKIGLIPGAGGTQRLPRVLGVEDALNMILSGEPVASERLAALPGQRLFDRLVEGDLMTGA 185
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
A A R P +R L A + AR A AP P + C+D++
Sbjct: 186 LAFAAEVAARRPLPLVRRL-----TAHHPNADAYFQFARNTATAMAPQFPAPRKCIDMVA 240
Query: 250 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKV 308
+ G+ E F L++ SR L HVF A+RA K+ +V D + R V+++
Sbjct: 241 ASVALPFDEGLRLEWSTFTALMLTPESRALRHVFMAERAAGKIADVPADTPV--RSVKRL 298
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
AVIG G MG GIA + + VV+ E E L +G+ TI N V +GKLT ++A
Sbjct: 299 AVIGAGTMGGGIAMNFLNAGLPVVMLETKQEALDRGVATIRRNYEAQVKKGKLTAERAEQ 358
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
L +L LDY++ D DMVIEAV E + +K+++F L++ P ILA+NTST+DLN +
Sbjct: 359 RLGLLSTTLDYADLADADMVIEAVFEDLGVKEQVFRRLDEVMKPGAILASNTSTLDLNRI 418
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
T +IG HFFSPA+VM LLE+VR E+T V+ +M +GK I+K VV G C G
Sbjct: 419 AAFTRRPQDVIGTHFFSPANVMKLLEVVRGEQTGKDVLATVMQLGKKIRKTCVVSGVCDG 478
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR Y + A LLV G ++D AI FG +GPF++ DLAG + A K
Sbjct: 479 FIGNRMVEQYLRQAFLLVDEGSTPQQVDKAIERFGFAMGPFRMSDLAGNDIGWAIRKRRY 538
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVLPIIEECRRLSNIM 607
P + S DLL ++GR G+ G G Y Y+ G + P P VL +IE RR I
Sbjct: 539 AERPHMQY-SKTPDLLCETGRFGQKTGAGWYDYQAGKRDAIPSPVVLELIEGHRRTLGI- 596
Query: 608 PGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFW 667
P + + EIVE +++ +VNE +LEEGI +A D+D + G FP +RGG +
Sbjct: 597 ---TPRKIGDDEIVERLVYALVNEGAHLLEEGIAAKAGDIDMVYLTGYGFPLHRGGPMRH 653
Query: 668 ADAVGANYVYTSLKKWSQL---YGNFFKPSRFLEERATKG 704
AD VG V +++++ F++P+ L A G
Sbjct: 654 ADEVGLFNVVRAMRRFQHNPLDDAAFWEPAPLLARLAADG 693
>gi|220925287|ref|YP_002500589.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Methylobacterium
nodulans ORS 2060]
gi|219949894|gb|ACL60286.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Methylobacterium
nodulans ORS 2060]
Length = 692
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 248/694 (35%), Positives = 374/694 (53%), Gaps = 27/694 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA++TL + PVNAL+ + G++ E A + VKAIVL G G FS G DI F K
Sbjct: 16 VAVLTLQSGPVNALSAALREGIRAAVERAEADQAVKAIVLIGGGRMFSAGADITEFGKPP 75
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
++PD+ +N IE +KP++AA+ G ALGGGLE A+ CH R+A P +LGLP
Sbjct: 76 RG---IVLPDL-----LNRIEGARKPVIAAIHGNALGGGLETALACHYRVAVPSAKLGLP 127
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 191
E+ LG++PG TQRLPR+VG KA+E+++ I +++ +GL+D + + L +
Sbjct: 128 EVKLGLLPGAGGTQRLPRIVGPRKALEVIVGGAPIGAKQAAAMGLVDEIAPEDSLRAHAV 187
Query: 192 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 251
+A + A +P R R D+L + + R + + +AC+ ++
Sbjct: 188 AFAERVVAEGRPLTRIRDREDRLAEGRDDPGLFDAFRRENARRLRGFEAPEACIACVQAA 247
Query: 252 IVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAV 310
G+ E + F +LV S +VFFA+R T+++P+V D +P + KV V
Sbjct: 248 CTLPFDQGLAFEREQFLKLVSGSQSAAQRYVFFAERQTARIPDVPEDTPTRP--IAKVGV 305
Query: 311 IGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNAL 370
IG G MG GI+ + I V + E E L +G+ I +N +G+L + +
Sbjct: 306 IGAGTMGGGISMNFLNAGIPVTIVETKREALDRGLGIIRSNYETTARKGRLRPEDVETRM 365
Query: 371 KMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGE 430
+L L+ K D++IEAV E + +K+ IFS L++ P ILA+NTS +D++ +
Sbjct: 366 GLLTDTLELEALKGCDLIIEAVFEDMGIKKDIFSRLDRIAKPGAILASNTSYLDIDEIAS 425
Query: 431 KTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFA 490
TS +IG HFFSPA+VM LLE+VR RT VI M +G+ I K+PV+VG C GF
Sbjct: 426 VTSRPGDVIGMHFFSPANVMRLLEVVRGARTERDVIATAMQIGRTIGKIPVLVGVCHGFV 485
Query: 491 VNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKA 550
NR + A L+ GV + +D I FGLP+GPF + DLAG + S+E +K+
Sbjct: 486 GNRMLAERQREANRLILEGVKPWDVDRVIYEFGLPMGPFAMSDLAGLDI--GWSRETNKS 543
Query: 551 FPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGG 610
R DLL + R G+ G G Y Y+ P II +
Sbjct: 544 ESVR-------DLLCERDRRGQKTGAGFYDYDAKRNAMPSAVTEEIIATVAERQGV---- 592
Query: 611 KPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADA 670
+ + +++EI+E L+P+VNE ++L+EG +RASD+D + G +P YRGG ++WAD+
Sbjct: 593 RRKAASDQEILERCLYPMVNEGAKILDEGKAIRASDIDIVWINGYGWPVYRGGPMYWADS 652
Query: 671 VGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+G V L+ + YG+ FKPS LE A +G
Sbjct: 653 IGLPKVLERLRAYEAEYGDAFKPSPLLERLAAEG 686
>gi|192292604|ref|YP_001993209.1| 3-hydroxyacyl-CoA dehydrogenase [Rhodopseudomonas palustris TIE-1]
gi|192286353|gb|ACF02734.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Rhodopseudomonas
palustris TIE-1]
Length = 699
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 252/704 (35%), Positives = 387/704 (54%), Gaps = 27/704 (3%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
V D VAI+T+ +PPVNAL+ + G+ + A + V+AIVL G F G
Sbjct: 4 VVTRATQDQVAIVTVDSPPVNALSAAVRRGILENVNAAVADPAVQAIVLVCAGRTFIAGA 63
Query: 66 DINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA 125
DI F G + P ++ V+ +E+ KP +AA+ G ALGGGLE+A+GCH R+A
Sbjct: 64 DITEF------GKPAQPP--ALNDVIAALENSPKPTIAAIHGTALGGGLEVALGCHFRVA 115
Query: 126 APKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 182
+ +LGLPE+ LG++PG TQRLPR VG A++M++ I + E K GL++ +V
Sbjct: 116 VKEAKLGLPEVKLGLLPGAGGTQRLPRAVGPELAVQMIVGGSPIGAAEALKHGLVEEIV- 174
Query: 183 SEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQ 242
E L+ + +A + A ++P R KL + R + A K A +
Sbjct: 175 -ENLVAGAVAFAKKVLAEKRPLRRLRDDDSKLAAAKADRSIFTNAVAAMTKKARGLEAPF 233
Query: 243 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 302
AC D I I G+ KE + F +LV+ D S+ + FFA+R +KV V D G KP
Sbjct: 234 ACADAIGAAIDLPFEEGLKKEREGFMKLVVSDQSKAQRYAFFAEREAAKVDGVPD-GTKP 292
Query: 303 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 362
R V +VA+IG G MG GIA + I V L E E L +G+ ++ N RG L
Sbjct: 293 RAVSRVAIIGAGTMGGGIAMSFANAGIPVTLIETGEEQLKRGLGIMQKNWEATAARGGLP 352
Query: 363 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 422
D + ++ GV+ KD D++IEAV E++ +K+++F+ ++ P +LA+NTS
Sbjct: 353 PDAPAKRMALITGVVGLENVKDADLIIEAVFETMAVKKEVFTAIDAHAKPGAVLASNTSY 412
Query: 423 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 482
+ ++ + T ++G HFFSPA+VM L EIVR +T+ +L +++ K I KVPVV
Sbjct: 413 LSIDEIAATTKRPQDVLGMHFFSPANVMKLCEIVRGAKTAPDALLTAVSIAKKIAKVPVV 472
Query: 483 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAA 542
VG C GF NR S+ + L+ G ++D+ + FG+P+GPF + DLAG +
Sbjct: 473 VGVCDGFVGNRMLAARSKQSEKLLFEGALPQQVDAVVTKFGMPMGPFAMGDLAGLDIGWR 532
Query: 543 TSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECR 601
+ K DR +S + D L ++GR G+ GKG Y YE+GS+ P PDP V +I +
Sbjct: 533 SRK-------DRGIKSEIADALCEAGRFGQKTGKGYYKYEQGSRAPMPDPEVETLINDT- 584
Query: 602 RLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYR 661
L+ + G K +T++EI+E +++P++NE R+LEE I R SD+D + G +P YR
Sbjct: 585 -LAKL--GLKRRDITDEEILERMVYPMINEGARILEEKIAARPSDIDVVWLYGYGWPIYR 641
Query: 662 GGIVFWADAVGANYVYTSLKKWSQLYGN-FFKPSRFLEERATKG 704
GG + +AD+VG ++ L +++ + +P+ L A +G
Sbjct: 642 GGPMHYADSVGLKHIAERLSAYAKATNDPSLEPAPLLARLAAEG 685
>gi|445497027|ref|ZP_21463882.1| peroxisomal bifunctional enzyme [Janthinobacterium sp. HH01]
gi|444787022|gb|ELX08570.1| peroxisomal bifunctional enzyme [Janthinobacterium sp. HH01]
Length = 695
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 257/697 (36%), Positives = 382/697 (54%), Gaps = 24/697 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA+ITL NPPVN L + ++A + D VKAIV+TG G FSGG DI F
Sbjct: 11 VAVITLNNPPVNGLGLATRTAAVKGIQQALADDAVKAIVITGAGKAFSGGADIKEFNSPK 70
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
+ + S+ ++ E KP+VAA+ + +GGGLEL++GCH R+A P Q+ LP
Sbjct: 71 A------LTEPSLHTLIATAESSTKPVVAAIHTVCMGGGLELSLGCHYRVAMPGAQIALP 124
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE-ELLKVS 190
E+ LG++PG TQRLPR++GL A+ M++ + S++ L D V ++ +L+ +
Sbjct: 125 EVKLGLLPGAGGTQRLPRVLGLEMALNMIVSGTPVLSDKLAGTALFDQVFAADADLVSSA 184
Query: 191 RLWALDIA-ARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
+A IA AR P +R D+ L+ +R K A P C++ +
Sbjct: 185 VAFAEKIADARPLPKVR-----DRKVDYPNHEAFLQFSRNTVKAMAGPFPAPLECVETVA 239
Query: 250 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 309
+ G+ E + F L+ S+ L H FFA+R SKVP+V R +++ A
Sbjct: 240 ASVTMKFEDGMKFERERFLHLIQTTESKALRHAFFAERVASKVPDVP-ADTPTRAIKQAA 298
Query: 310 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 369
VIG G MG GIA + I VV+ E E L KG+ TI N + +GKLTQ+K +
Sbjct: 299 VIGAGTMGGGIAMNFLNAGIPVVMLETKQEALDKGLATIRKNYENTMKKGKLTQEKFDQR 358
Query: 370 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 429
+ ++ G L Y + D+V+EAV E + +K+ +F +L++ P ILA+NTST+DLN +
Sbjct: 359 MALVSGTLAYEDIGQADIVVEAVFEDMGVKETVFRKLDEVMKPGAILASNTSTLDLNQIA 418
Query: 430 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 489
T +IG HFFSPA+VM LLEIVR +T V+ + + K +KK VV G C GF
Sbjct: 419 NFTKRPQDVIGTHFFSPANVMKLLEIVRGAQTGKDVLATALALSKKLKKTGVVSGVCDGF 478
Query: 490 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDK 549
NR YS+ A L+ G ++D A+ FG +GPF++ DLAG + A K
Sbjct: 479 IGNRMIEQYSRQAGFLLEEGALPEQVDKAVEKFGFAMGPFRMGDLAGNDIGWAIRKRRYV 538
Query: 550 AFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGS-KPKPDPSVLPIIEECRRLSNIMP 608
P+ S+ S DLL + GR G+ G G Y Y+ G K P+ V +I + ++I
Sbjct: 539 EKPEISY-SRTADLLCEMGRFGQKTGAGWYDYKAGDRKAYPNEQVNAMI--VQHSADIGV 595
Query: 609 GGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWA 668
+ IS ++EIVE +++ +VNE+ +LEEGI +RASD+D + G FP +RGG +F+A
Sbjct: 596 ARRKIS--DQEIVERLVYSMVNEAAHILEEGIALRASDIDMVYLTGYGFPLFRGGPMFYA 653
Query: 669 DAVGANYVYTSLKKWSQLY-GNFFKPSRFLEERATKG 704
D VG V ++ K++Q + G +KP+ L A +G
Sbjct: 654 DTVGLPNVLAAINKYAQGHQGGAWKPAPLLVRLAEEG 690
>gi|222111212|ref|YP_002553476.1| 3-hydroxyacyl-CoA dehydrogenase [Acidovorax ebreus TPSY]
gi|221730656|gb|ACM33476.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Acidovorax ebreus
TPSY]
Length = 699
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 261/682 (38%), Positives = 379/682 (55%), Gaps = 30/682 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA+ITL NPPVN L + G+ D + A + VKAIV+TG GG FSGG DI F
Sbjct: 11 VAVITLNNPPVNGLGLATRQGVVDGLDRAQADAAVKAIVITGAGGAFSGGADIKEF---- 66
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G + + ++ V+N +E C KP+VA + + +GGGLELA+GCH R+AAP + LP
Sbjct: 67 --GTDKSLQEPNLHSVINAVEYCTKPVVAVIHTVCMGGGLELALGCHYRVAAPGCNVALP 124
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSE-----EGWKLGLIDAVVTSEEL 186
E+ LG++PG TQRLPR+VG+ A+ M++ + + SE G KL D + S E
Sbjct: 125 EVKLGILPGAGGTQRLPRVVGVEAALNMIVSGEPVKSEMIGAVPGQKL--FDKMTASPES 182
Query: 187 LKVSRL-WALDIAARRK-PWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 244
L L +A +A R P +R+L E + AR K A N P C
Sbjct: 183 LAEEALAFARSVADVRPLPLVRNLPCKH-----PEGDAYFQFARNMVKGMAKNFPAPAKC 237
Query: 245 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRG 304
+D +E G+ E ++F L+ SR L H+FFA+RA SK+P+V K R
Sbjct: 238 VDAVEAATKRKFADGLAYERELFINLMWTPESRALRHLFFAERAASKIPDVPSETPK-RD 296
Query: 305 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 364
++KV VIG G MG GI+ + I V + E+ E L +GI TI+ N V +GKL +D
Sbjct: 297 IKKVGVIGAGTMGGGISMNFLNAGIPVTILEMKQEALDRGIGTIQKNYEAQVKKGKLKED 356
Query: 365 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 424
K + +L L+Y++ KD D++IEAV E + +K+ +F +L+ P ILA+NTST+D
Sbjct: 357 KYQQRMALLSTTLNYADLKDCDLIIEAVFEELGVKEAVFKQLDAVAKPGAILASNTSTLD 416
Query: 425 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 484
++ + T ++G HFFSPA+VM LLE+VR + T+ V+ +M + K IKK VV G
Sbjct: 417 VDKIAAFTQRPQDVVGMHFFSPANVMKLLEVVRGKATAKDVLATVMALAKKIKKTAVVSG 476
Query: 485 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATS 544
C GF NR YSQ A L+ G ++D AI FG +GPF++ DLAG + A
Sbjct: 477 VCDGFIGNRMIERYSQQAGFLLDEGCTPQQVDKAIEKFGFAMGPFRMGDLAGNDIGWAIR 536
Query: 545 KEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVLPIIEECRRL 603
K PD + S DLL + GR G+ G G Y Y+ G + P V +IE R+
Sbjct: 537 KRRAVEQPDMKY-SKTADLLCEMGRFGQKTGAGWYDYQAGKRDAIPSDVVNQMIEAHRKA 595
Query: 604 SNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGG 663
I P V+++EIV+ +++ +VNE ++LEEGI ++ D+D + G FP +RGG
Sbjct: 596 LGITPR----KVSDEEIVQRLVYALVNEGAKILEEGIASKSGDIDMVYLTGYGFPIHRGG 651
Query: 664 IVFWADAVGANYVYTSLKKWSQ 685
+ +A VG V S+K++++
Sbjct: 652 PMHYASEVGLFNVVQSMKRFAR 673
>gi|295676535|ref|YP_003605059.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Burkholderia
sp. CCGE1002]
gi|295436378|gb|ADG15548.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Burkholderia
sp. CCGE1002]
Length = 696
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 251/681 (36%), Positives = 371/681 (54%), Gaps = 26/681 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+DGVA++TL NPPVN L + AG+ + + A + ++AIVLTG G FSGG DI F
Sbjct: 8 HDGVAVLTLNNPPVNGLGLSTRAGIVEGLDRAQNDPAIEAIVLTGAGKAFSGGADITEFN 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ +L V+ +E KP+VAA+ +A+GGGLELA+G H R+AA Q+
Sbjct: 68 TPKATQEPTLA------TVIKAVEGSAKPVVAAIHSVAMGGGLELALGAHYRVAAAGAQI 121
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
LPE+ LG++PG TQRLPR +GL ++ M++ + SE+ GL D VV + L
Sbjct: 122 ALPEVKLGILPGAGGTQRLPRAIGLEASLNMIVSGTPVLSEKLADSGLFDEVVANPAELA 181
Query: 189 VSRLWA---LDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACL 245
+ L + A P +R D+ A ++ AR A N P C+
Sbjct: 182 EAALAFARKVGAQAGPHPKVR-----DRKIEHPNAAGFIQFARNSVAAIAKNFPAPHKCI 236
Query: 246 DVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRG 304
D +E G+ G G+ E + F LV S L H FF +RA SK+P+V +D + R
Sbjct: 237 DAVEAGVKDGFDKGLAFERECFIALVQTPESHALRHAFFGERAASKIPDVPSDTSV--RD 294
Query: 305 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 364
+ +VAVIG G MG GIA + I V L E E L +G+ TI N VT+GKL +
Sbjct: 295 INQVAVIGAGTMGGGIAMNFLNAGIPVTLLETKQEALDRGVATIRKNYEATVTKGKLKPE 354
Query: 365 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 424
L +L L Y + K DM+IEAV E + +K+++F L++ P ILA+NTST+D
Sbjct: 355 VMEQRLALLSPTLSYDDLKHADMIIEAVFEELGVKEQVFGRLDEVAKPGAILASNTSTLD 414
Query: 425 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 484
++ + T ++G HFFSPA+VM LLE+VR + T+ V+ +M + K I+K VV G
Sbjct: 415 VDRIAAFTKRPQDVVGMHFFSPANVMKLLEVVRGKETAKDVLATVMKLAKKIRKTAVVSG 474
Query: 485 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATS 544
C GF NR Y + A ++ G ++D AI FG +GPF++ DLAG + A
Sbjct: 475 VCDGFIGNRMIEQYLRQALFMLEEGALPAQVDKAIEKFGFAMGPFRMSDLAGNDIGWAIR 534
Query: 545 KEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVLPIIEECRRL 603
K PD + S + D L + GR G+ G G Y Y+ G + P +V +I E +
Sbjct: 535 KRRYVEHPDMHY-SKIADRLCEMGRFGQKTGGGWYDYKAGDRTAYPSGAVNEMIVEYSKE 593
Query: 604 SNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGG 663
++ + +++ EIVE ++F +VNE ++LEEGI +ASD+D + G FP YRGG
Sbjct: 594 TH----SERRKISDDEIVERLVFALVNEGAKILEEGIASKASDIDMVYLTGYGFPLYRGG 649
Query: 664 IVFWADAVGANYVYTSLKKWS 684
+ +AD VG V ++++++
Sbjct: 650 PMLYADTVGLYNVERAIRRYA 670
>gi|126665779|ref|ZP_01736760.1| fatty oxidation complex, alpha subunit [Marinobacter sp. ELB17]
gi|126629713|gb|EBA00330.1| fatty oxidation complex, alpha subunit [Marinobacter sp. ELB17]
Length = 697
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 250/695 (35%), Positives = 376/695 (54%), Gaps = 21/695 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+ +IT+ PPVNAL+ + +GL E+ + K ++L G F G DI F K
Sbjct: 13 IGVITVNYPPVNALSHAVRSGLIAALEQGQEDSEAKVLLLVCEGRTFIAGADIREFGKP- 71
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
M + +V E+ KP+VAA+ G ALGGGLE+A+GCH RIA ++GLP
Sbjct: 72 -------MQKPGLPELVETYENSDKPLVAAIHGTALGGGLEMALGCHYRIALNSAKIGLP 124
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 191
E+ LG++PG TQRLPRL G KA+E++ + + +++ LG++D V +++
Sbjct: 125 EVKLGLLPGAGGTQRLPRLTGAQKALEIITSGEFVGAKDALALGILDVVDDGKDVKAAGL 184
Query: 192 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 251
+A IA KP R DK+ + + +V R +K A C+D IE
Sbjct: 185 AYAQQIADEGKPVRRVRDLKDKIAA-DKGSDVFDQFRAVLQKKARGQFSPFKCVDAIEAA 243
Query: 252 IVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVI 311
G+ +E ++F E + G +H FFA+R SKV ++ R V V +I
Sbjct: 244 FDLPFAEGMKRERELFTECMDSPQRAGQIHSFFAEREVSKVKGLSK-DTPVRDVNSVGII 302
Query: 312 GGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALK 371
G G MG GIA I V++ E+ E L KG+ I N +G+LTQ + +
Sbjct: 303 GAGTMGGGIAMNFANVGIPVIIVEMKQEALDKGLGIIRKNYENSAKKGRLTQQQVEDRTA 362
Query: 372 MLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEK 431
++ G L Y +FK VD+VIEAV E++ +K++IF++L+ C P ILA+NTST+D++ +
Sbjct: 363 LITGSLSYDDFKSVDLVIEAVFENMAVKKEIFAKLDGICKPGTILASNTSTLDIDEIASA 422
Query: 432 TSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAV 491
T + ++G HFFSPA+VM LLE VR +TS +V +M V K IKKV V+VGNC GF
Sbjct: 423 TRRPEDVVGMHFFSPANVMKLLENVRGSKTSDEVKATVMAVAKKIKKVGVLVGNCHGFVG 482
Query: 492 NRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAF 551
NR A LV+ G ++D + G P+G F + DLAG V +E A
Sbjct: 483 NRMLHRRGAEAMTLVNEGATPQQVDKVLTDLGYPMGQFAMSDLAGIDVGYRIREELRNA- 541
Query: 552 PDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGG 610
+D L + R G+ KG+Y YE+GS+ P PDP V +IE+ R I
Sbjct: 542 -GEQVAPSWMDKLAEQNRLGQKTMKGVYAYEEGSRTPVPDPEVERVIEDFRNEQGI---- 596
Query: 611 KPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADA 670
+T++EI+E ++ +VNE+ ++LEEG+ RA D+D + G FP+YRGG +FWAD
Sbjct: 597 SSREITDQEILERCMYVMVNEAAKILEEGVADRALDIDVVWIYGYGFPAYRGGPMFWADQ 656
Query: 671 VGANYVYTSLKKW-SQLYGNFFKPSRFLEERATKG 704
VG + + +++K+ + G +KP+ L++ G
Sbjct: 657 VGLDLILAAVEKYHGDVGGEQWKPADLLKQLVADG 691
>gi|86748869|ref|YP_485365.1| enoyl-CoA hydratase [Rhodopseudomonas palustris HaA2]
gi|86571897|gb|ABD06454.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Rhodopseudomonas palustris HaA2]
Length = 699
Score = 414 bits (1064), Expect = e-112, Method: Compositional matrix adjust.
Identities = 252/698 (36%), Positives = 385/698 (55%), Gaps = 27/698 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+DG+AI+T+ +PPVNAL+ + G+ + A + +V+AIVLT G F G DI F
Sbjct: 10 HDGIAIVTVDSPPVNALSAAVRRGILENVNAAVADPEVQAIVLTCAGRTFIAGADITEFG 69
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K P ++ V+ +E+ KP +AA+ G ALGGGLE+A+GCH R+A + +L
Sbjct: 70 K-------PPQPP-ALNDVIAALENSPKPTIAAIHGTALGGGLEVALGCHFRVAVKEAKL 121
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
GLPE+ LG++PG TQRLPR VG A++M++ I + E K GLI +V E
Sbjct: 122 GLPEVKLGLLPGAGGTQRLPRAVGPELAVQMIVGGNPIGAAEALKHGLISEIV--EGPAS 179
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 248
+A + A + P R KL + R + A K A + AC D I
Sbjct: 180 GGEAFARKVLAEKLPARRLRDDDSKLAAARADRSIFTNAVAAMTKKARGLEAPFACADAI 239
Query: 249 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 308
I G+ KE + F +LV+ D S+ + FFA+R +KV V D G KPR V +V
Sbjct: 240 GAAIDLPFEEGLKKEREGFMKLVVSDQSKAQRYAFFAEREAAKVDGVPD-GTKPRPVSRV 298
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
A+IG G MG GIA + I V L E E L +G+ ++ N RG + D
Sbjct: 299 AIIGAGTMGGGIAMSFANAGIPVTLIETGKEQLDRGMGIMQKNYEATAARGGIPADAPAK 358
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
+ ++ G++ KD D++IEAV E++ +K+++F+ L+ P +LA+NTS ++++ +
Sbjct: 359 RMGLITGMVGLDNVKDADLIIEAVFETMAVKKEVFTALDAYAKPGAVLASNTSYLNVDDI 418
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
T ++G HFFSPA+VM L EIVR +T+ +L +++ K I KVPVVVG C G
Sbjct: 419 AATTKRPQDVLGMHFFSPANVMKLCEIVRGAKTAPDALLTAVSIAKKIAKVPVVVGVCDG 478
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR S+ + L+ G ++D+ + FG+P+GPF + DLAG + + K
Sbjct: 479 FVGNRMLAARSKQSEKLLFEGAPPQQVDAVVTKFGMPMGPFAMGDLAGLDIGWRSRK--- 535
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIM 607
DR +S + D L ++GR G+ GKG Y YE GS+ P PDP V +I + L+ +
Sbjct: 536 ----DRGIKSEIADALCEAGRFGQKTGKGYYKYEAGSRSPLPDPEVETLINDT--LTKL- 588
Query: 608 PGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFW 667
G K V+++EI+E +++P++NE R+LEE I R SD+D + G +P YRGG + +
Sbjct: 589 -GLKRREVSDEEILERMMYPMINEGARILEENIAARPSDIDVVWLYGYGWPIYRGGPMHY 647
Query: 668 ADAVGANYVYTSLKKWSQLYGN-FFKPSRFLEERATKG 704
AD VG ++ L +++ + +PS L++ A +G
Sbjct: 648 ADGVGLKHIAERLSYYAKATNDPSLEPSPLLKKLAAEG 685
>gi|398809677|ref|ZP_10568520.1| 3-hydroxyacyl-CoA dehydrogenase [Variovorax sp. CF313]
gi|398085084|gb|EJL75749.1| 3-hydroxyacyl-CoA dehydrogenase [Variovorax sp. CF313]
Length = 702
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 253/711 (35%), Positives = 386/711 (54%), Gaps = 36/711 (5%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A+ITL NPPVN L G+ D +A + D VKAIV+TG G FSGG DI F
Sbjct: 11 IAVITLTNPPVNGLGFSTRIGITDGLSKANADDAVKAIVITGAGKAFSGGADIKEF---- 66
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G + + ++ V+ +E KPIVAA+ + +GGGLELA+GCH R+AAP T + LP
Sbjct: 67 --GTPKALQEPNLLSVILALEASAKPIVAAIHSVCMGGGLELALGCHYRVAAPGTSIALP 124
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSE-----EGWKLGLIDAVVTS--- 183
E+ LG+IPG TQRLPR++G+ A+ M++ + + SE G KL D + S
Sbjct: 125 EVKLGLIPGAGGTQRLPRVLGVETALNMIVSGEPVKSELLASLPGQKL--FDKLADSPES 182
Query: 184 --EELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 241
+E + +R A A P +R+L G + A+ + N P
Sbjct: 183 VFDEAVAFARSVAGKTGADALPLVRNLPCKHPQGD-----AYFQFAKNMVGGMSKNYPAP 237
Query: 242 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 301
C+D ++ +G+ +E ++F L+ S L H+F A+RA SK+P+V + K
Sbjct: 238 LQCVDAVQAATKMKFDAGMAEERRIFTSLMFTPESLALRHLFMAERAASKIPDVPEDTPK 297
Query: 302 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 361
R ++ V VIG G MG GI+ + I V + E+ E L +G+ TI+ N V +GKL
Sbjct: 298 -REIKAVGVIGAGTMGGGISMNFLNAGIPVKILEMKQEALDRGVATIKKNYEAQVKKGKL 356
Query: 362 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 421
QDK + +L L Y + KD D++IEAV E + +K+K+F EL++ ILA+NTS
Sbjct: 357 KQDKYEQRMALLSTTLSYDDLKDADLIIEAVFEEIGVKEKVFKELDRVAKKGAILASNTS 416
Query: 422 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 481
T+D++ + T ++G HFFSPA+VM LLE+VR + T+ V+ +M +GK IKK V
Sbjct: 417 TLDVDKIASFTERPQDVVGMHFFSPANVMKLLEVVRGKATAKDVLATVMAIGKKIKKTSV 476
Query: 482 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAA 541
V G C GF NR YS+ A L+ G ++D A+ FG +GPF++ DLAG +
Sbjct: 477 VSGVCDGFIGNRMIEQYSRQAGFLLDEGATPQQVDKAVEKFGFAMGPFRMGDLAGNDIGW 536
Query: 542 ATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVLPIIEEC 600
A K D + S D L + GR G+ G G Y Y+ G + P V +IE+
Sbjct: 537 AIRKRRAVERADMKY-SRTADKLCELGRFGQKTGAGWYDYQAGKRDAIPSELVNKMIEDH 595
Query: 601 RRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSY 660
R+ I P ++++EIV+ ++F +VNE +LE+GI ++ D+D + G FP +
Sbjct: 596 RKELGIT----PRKISDEEIVQRLVFALVNEGAHILEDGIASKSGDIDMVYLTGYGFPIW 651
Query: 661 RGGIVFWADAVGANYVYTSLKKWSQL---YGNFFKPSRFLEERATKGIPLS 708
RGG + +A VG V ++K++++ G F++P+ +++ +G S
Sbjct: 652 RGGPMHYASQVGLYNVAETMKRFAKNPRDDGEFWQPAPLIQKLVAEGKQFS 702
>gi|316933001|ref|YP_004107983.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase protein
[Rhodopseudomonas palustris DX-1]
gi|315600715|gb|ADU43250.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein
[Rhodopseudomonas palustris DX-1]
Length = 699
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 252/704 (35%), Positives = 387/704 (54%), Gaps = 27/704 (3%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
V D VAI+T+ +PPVNAL+ + G+ + A + V+AIVL G F G
Sbjct: 4 VVTRATQDQVAIVTVDSPPVNALSAAVRRGILENVNAAVADPAVQAIVLVCAGRTFIAGA 63
Query: 66 DINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA 125
DI F K P ++ V+ +E+ KP +AA+ G ALGGGLE+A+GCH R+A
Sbjct: 64 DITEFGK-------PPQPP-ALNDVIAALENSPKPTIAAIHGTALGGGLEVALGCHFRVA 115
Query: 126 APKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 182
+ +LGLPE+ LG++PG TQRLPR VG A++M++ I + E K GL++ +V
Sbjct: 116 VKEAKLGLPEVKLGLLPGAGGTQRLPRAVGPELAVQMIVGGSPIGAAEALKHGLVEEIV- 174
Query: 183 SEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQ 242
E L+ + +A + A ++P R KL + R + A K A +
Sbjct: 175 -ENLVAGAVAFAKKVVAEKRPTRRLRDDDSKLAAAKADRSIFTNAVAAMTKKARGLEAPF 233
Query: 243 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 302
AC D I I G+ KE + F +LV+ D S+ + FFA+R +KV V D G KP
Sbjct: 234 ACADAIGAAIDLPFEEGLKKEREGFMKLVVSDQSKAQRYAFFAEREAAKVDGVPD-GTKP 292
Query: 303 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 362
R V +VA+IG G MG GIA + I V L E E L +G+ ++ N RG L
Sbjct: 293 RPVSRVAIIGAGTMGGGIAMSFANAGIPVTLIETGEEQLKRGLGIMQKNWEATAARGGLP 352
Query: 363 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 422
D + ++ GV+ KD D++IEAV E++ +K+++F+ ++ P +LA+NTS
Sbjct: 353 PDAPAKRMALITGVVGLENVKDADLIIEAVFETMAVKKEVFTAIDAHAKPGAVLASNTSY 412
Query: 423 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 482
+ ++ + T ++G HFFSPA+VM L EIVR +T+ +L +++ K I KVPVV
Sbjct: 413 LSIDDIAAVTKRPQDVLGMHFFSPANVMKLCEIVRGAKTAPDALLTAVSIAKKIAKVPVV 472
Query: 483 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAA 542
VG C GF NR S+ + L+ G ++D+ + FG+P+GPF + DLAG +
Sbjct: 473 VGVCDGFVGNRMLAARSKQSEKLLFEGALPQQVDAVVTKFGMPMGPFAMGDLAGLDIGWR 532
Query: 543 TSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECR 601
+ K DR +S + D L ++GR G+ GKG Y YE GS+ P PDP V +I +
Sbjct: 533 SRK-------DRGIKSEIADALCEAGRFGQKTGKGYYKYEAGSRAPMPDPEVETLINDT- 584
Query: 602 RLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYR 661
L+ + G K +T++EI+E +++P++NE R+LEE I R SD+D + G +P YR
Sbjct: 585 -LAKL--GLKRRDITDEEILERMVYPMINEGARILEEKIAARPSDIDVVWLYGYGWPIYR 641
Query: 662 GGIVFWADAVGANYVYTSLKKWSQLYGNF-FKPSRFLEERATKG 704
GG + +AD+VG ++ L +++ + +P+ L++ A +G
Sbjct: 642 GGPMHYADSVGLKHIAERLAYYAKATNDLSLEPAPLLKKLADEG 685
>gi|355388867|gb|AER62376.1| hypothetical protein [Hordeum vulgare subsp. spontaneum]
Length = 315
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 205/315 (65%), Positives = 253/315 (80%)
Query: 196 DIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHG 255
DI RKPWI+SL++TDKL SL EARE+LK AR QA+K A N+ C+DVIEEGIV G
Sbjct: 1 DICELRKPWIKSLYKTDKLESLGEAREILKFARAQARKQAANLEHPLICIDVIEEGIVSG 60
Query: 256 GYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGL 315
+G+ KEA F+ L+ DT + L+HVFF+QRATSKVP TD+GL PR + KVA++GGGL
Sbjct: 61 PRAGLWKEANAFQGLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKIMKVAILGGGL 120
Query: 316 MGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG 375
MGSGIATA IL+N V+LKEVN ++L GI I+AN++ V +GK+T+++ AL +L G
Sbjct: 121 MGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEKALSLLSG 180
Query: 376 VLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQ 435
L Y +FK+VD+VIEAVIE+V LKQ+IF++LEK CP HCILATNTSTIDLN++GEKT SQ
Sbjct: 181 ALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIGEKTKSQ 240
Query: 436 DRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAF 495
DRI+GAHFFSPAHVMPLLEIVRT+ TSAQV++DL+ VGK IKK P+VVGNCTGFAVNR F
Sbjct: 241 DRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGFAVNRMF 300
Query: 496 FPYSQSARLLVSLGV 510
FPY+QSA L V G+
Sbjct: 301 FPYTQSALLFVDYGL 315
>gi|254429789|ref|ZP_05043496.1| 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain family
[Alcanivorax sp. DG881]
gi|196195958|gb|EDX90917.1| 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain family
[Alcanivorax sp. DG881]
Length = 695
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 252/698 (36%), Positives = 385/698 (55%), Gaps = 29/698 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+ +I + PPVNAL + GL+ +A + + ++A+V+ G G F G DI F
Sbjct: 13 IGVIRINYPPVNALGHGVREGLQQCLRDALADEQIRAVVVIGEGKTFPAGADIREF---- 68
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G P ++ V++ E K +VAA+ G ALGGGLE+A+GC R+A +LGLP
Sbjct: 69 --GKPPQQP--ALPAVIDEYEASDKLVVAAIHGTALGGGLEVALGCDYRVALDSARLGLP 124
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL---LK 188
E+ LG++PG TQRLPRLVG KA+EM++ + ++E LGL+D +V+ + L L
Sbjct: 125 EVKLGLLPGAGGTQRLPRLVGAQKALEMVVGGNPVKAKEALSLGLVDEMVSGDLLDGALA 184
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 248
+R D A RK +R L D L + E +AR Q AP +C+ +
Sbjct: 185 YTRQLLADNAPLRK--LRDLAVPDAQDGLFDQFE-QSIARKQRGFKAPF-----SCIKAV 236
Query: 249 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 308
+ + GV +E ++F EL++ S HVFFA+R +KVP + D R + +V
Sbjct: 237 KAAVELPFDKGVERERELFFELLVSPESAAQRHVFFAEREVAKVPGL-DKNTPKREINQV 295
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
AVIG G MG GIA I V L EV + L +G+ I N +G++T ++
Sbjct: 296 AVIGAGTMGGGIAMNFANAGIPVRLLEVKEDALERGVAVIRKNYENTAKKGRITDEQVEQ 355
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
+ +++ L Y + DVD+VIEAV E++ +K+ +FSEL++ C P ILATNTST+D++ +
Sbjct: 356 RMALIQPTLSYDDLSDVDLVIEAVFENMDVKEAVFSELDRVCKPGAILATNTSTLDVDRI 415
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
T + ++G HFFSPA+VM LLE VR E+TS +V+ +M + + I KV V+VG C G
Sbjct: 416 ASFTQRPEDVMGMHFFSPANVMKLLENVRGEKTSDEVVATVMDLSRRIGKVGVLVGVCHG 475
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR A LV+ G ++D + G P+GPF + DLAG V +E
Sbjct: 476 FVGNRMLHRRQAEAVQLVNEGASPQQVDKVLFDLGFPMGPFAMSDLAGMDVGYRIREELR 535
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIM 607
K P D L+++GR G+ G++ Y+ G + P P +V IIE+ R + I
Sbjct: 536 KEDPANGPARNWTDELVEAGRLGQKTQAGVFDYKDGDRTPVPSTAVDGIIEQYRSNNGIT 595
Query: 608 PGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFW 667
P ++++EI+E ++ +VNE ++LEEGI R D+D + G FP YRGG++FW
Sbjct: 596 PR----EISDQEILERCMYVMVNEGAKILEEGIAARPLDVDVIWIYGYGFPVYRGGVLFW 651
Query: 668 ADAVGANYVYTSLKK-WSQLYGNFFKPSRFLEERATKG 704
AD VG ++ + + + Q + +KP++ L + A +G
Sbjct: 652 ADQVGVKAIFEKVNEIYQQTGSDVWKPAKLLSDLAEQG 689
>gi|429211033|ref|ZP_19202199.1| enoyl-CoA hydratase [Pseudomonas sp. M1]
gi|428158447|gb|EKX04994.1| enoyl-CoA hydratase [Pseudomonas sp. M1]
Length = 693
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 254/703 (36%), Positives = 383/703 (54%), Gaps = 41/703 (5%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA+I + NPPVNAL + + AGL F EA + V+A+VL G F G DI F K
Sbjct: 13 VALIKVDNPPVNALGLAVRAGLLRAFREAEADAAVRAVVLVCAGRTFMAGADIKEFGKPP 72
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
A S+ VV IE KP VA + G ALGGGLE+A+ CH RIA Q+GLP
Sbjct: 73 QA--------PSLPEVVEAIEASAKPSVAVIHGTALGGGLEVALACHYRIARADAQVGLP 124
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 191
E+ +G++PG TQRLPRL G+ +A+EM++ + + + + G++D +V
Sbjct: 125 EVKIGLLPGAGGTQRLPRLAGVGRALEMIVSGNPVKAPQAVEYGILDELVDG-------- 176
Query: 192 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTA------PNMPQHQACL 245
D+A + R L + + R+V A L A K A P + C+
Sbjct: 177 ----DLAEAGLAYARRLLDEGRGPRRTGERQVQGDAALIAAKHAEVQKRMPGLFSPLRCV 232
Query: 246 DVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV---PNVTDIGLKP 302
+E G+ +E ++F+E + L+H FFA+R +K+ P T +
Sbjct: 233 AAVEAASRLPLAEGLKRERELFQECLESPQRAALIHAFFAEREAAKIAGLPADTQV---- 288
Query: 303 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 362
R VR AVIGGG MG GIA I V L EV+ L + ++ A + V RG LT
Sbjct: 289 REVRTAAVIGGGTMGVGIALCFANVGIPVKLLEVDGAALDRALQRARATYQASVERGSLT 348
Query: 363 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 422
D L +++GVL+Y+ DVD+ IEAV ES+ +K+++F L+ C P ILA+NTS+
Sbjct: 349 SDAMEKRLGLIQGVLNYAALADVDLAIEAVFESLEVKRQVFERLDAVCKPGAILASNTSS 408
Query: 423 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 482
+DL+ + T ++G HFFSPA+VM LLE+VR TSA+V+ M +GK +KKV V
Sbjct: 409 LDLDAIAAFTRRPQDVVGLHFFSPANVMRLLEVVRGRETSAEVLASAMQLGKRLKKVAVA 468
Query: 483 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAA 542
VG C GF NR F Y + A L+ G ++D+A+R FG+ +GP + DL+G ++ A
Sbjct: 469 VGVCDGFVGNRMIFQYGRQAEFLLEEGASPAQVDAALRDFGMAMGPLAVRDLSGLDISHA 528
Query: 543 TSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECR 601
+ ++D L +G G+ G G Y Y +GS+ P+ +P++ ++E+
Sbjct: 529 IRERQRPGLEPGQTLPTVLDHLYAAGMLGQKTGAGFYLYPQGSRTPQDNPALPAMLEQAA 588
Query: 602 RLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYR 661
I+ +P+S + IVE LF +VNE+ R+L+EGI RASD+D + G FP++R
Sbjct: 589 ATRGIVR--QPVSA--EHIVERCLFALVNEAARILDEGIAQRASDVDLIFLNGYGFPAWR 644
Query: 662 GGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
GG +F AD +G ++V ++++ Q +G +++P+ LE +G
Sbjct: 645 GGPLFHADRLGLDHVLQRIREFHQRFGAWWEPAPLLERLVAEG 687
>gi|167644779|ref|YP_001682442.1| 3-hydroxyacyl-CoA dehydrogenase [Caulobacter sp. K31]
gi|167347209|gb|ABZ69944.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Caulobacter sp. K31]
Length = 692
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 246/694 (35%), Positives = 373/694 (53%), Gaps = 27/694 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+ ++TL +PPVNAL+ + GLK F+ A + V+AIVL G F G DI F K
Sbjct: 16 IGVVTLNSPPVNALSAAVREGLKGAFDAAIADPAVRAIVLICEGKTFIAGADITEFGKA- 74
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
M S++ V N IE+ KP++AA+ G LGGGLE+A+ H R+A P + GLP
Sbjct: 75 -------MTGPSLQDVQNTIENSPKPVIAAIHGTVLGGGLEVALVAHFRVAVPSAKAGLP 127
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 191
E+ +G++PG TQRLPR+VG+ KA+EM+ + + ++ +GL D++V L +
Sbjct: 128 EVNIGLLPGAGGTQRLPRVVGVEKALEMVTTGQHVPAKAALAMGLFDSLVEEGALRDGAI 187
Query: 192 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 251
+A + A KP R + K+ + E+ R + + + IE
Sbjct: 188 AFARVVLAEDKPLTRIRDQNAKVEAARGKPEIFSEFRAANARKFRGFLAPENNIKCIEAA 247
Query: 252 IVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAV 310
+ G+ +E ++F EL+ S HVFFA+R +K+P+V D + P V+KV V
Sbjct: 248 VNLPFDEGLKEERRLFMELMTGTQSAAQRHVFFAERQAAKIPDVPDDTPIIP--VKKVGV 305
Query: 311 IGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNAL 370
IG G MG GI+ + I V + E E L +G+ I N +G+LTQD +
Sbjct: 306 IGAGTMGGGISMNFLNAGIPVTIIEAKQENLDRGVGVIRKNYENTAKKGRLTQDDVEKRM 365
Query: 371 KMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGE 430
+L + + D D++IEAV E + +K+++F +L+ P ILA+NTS +DL+++
Sbjct: 366 ALLTPSMHLEDLTDCDLMIEAVFELMEIKKEVFGKLDTIAKPGAILASNTSYLDLDVIAA 425
Query: 431 KTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFA 490
TS +IG HFFSPA+VM LLEIVR +T VI M +GK I KV V+VGNC GF
Sbjct: 426 STSRPQSVIGLHFFSPANVMKLLEIVRGAKTDKSVIATAMRIGKTIGKVAVLVGNCHGFV 485
Query: 491 VNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKA 550
NR + A+ L+ G + +D + FGLP+GPF + DLAG + ++K
Sbjct: 486 GNRMLAQRQREAQKLILEGAMPWDVDRVLYDFGLPMGPFAMSDLAGLDIGWDSTK----- 540
Query: 551 FPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGG 610
S S + ++L + R G+ NGKG Y Y++ KP V +I + I
Sbjct: 541 ----SSSSTVREVLCEMDRRGQKNGKGFYDYDENRVAKPSKEVEQVILDFAEKRQI---- 592
Query: 611 KPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADA 670
+ ++++EI+E L+P+VNE ++LEEG +RASD+D + G +P Y GG +FW +
Sbjct: 593 QRREISDQEILERCLYPMVNEGAKILEEGKAIRASDIDTVWINGYGWPVYTGGPMFWGEL 652
Query: 671 VGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
VG + V +K + G+ FKPS LE +G
Sbjct: 653 VGLDKVLAKMKAFQAELGDDFKPSALLERLVAEG 686
>gi|254473846|ref|ZP_05087240.1| peroxisomal bifunctional enzyme [Pseudovibrio sp. JE062]
gi|211956956|gb|EEA92162.1| peroxisomal bifunctional enzyme [Pseudovibrio sp. JE062]
Length = 717
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 248/705 (35%), Positives = 383/705 (54%), Gaps = 24/705 (3%)
Query: 5 RVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGG 64
+V+ E+ D VA++T+ N PVNAL++ I L + ++ + KA V+ G G F G
Sbjct: 10 QVSYELRGD-VAVMTVSNAPVNALSLAIRQDLVARIKQFEEDEVAKAAVIVGEGKVFIAG 68
Query: 65 FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
DI F++ +PDV ++ IE C KP++AA+ G+ALGGGLE+A+GCH R+
Sbjct: 69 ADIREFKR---PATEPHLPDV-----IDGIEACSKPVIAAIHGVALGGGLEVALGCHFRV 120
Query: 125 AAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVV 181
++GLPE+ LG+IPG TQRLPRL G KA+EM+ I ++ G++D V
Sbjct: 121 GVKGAKVGLPEVHLGIIPGAGGTQRLPRLAGYEKALEMIPSGAPIGADAAKAAGILDGVS 180
Query: 182 TSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 241
+ + +A + P L R +L + + +V A+ K A
Sbjct: 181 EEADAVAAGLAFARSVIDNGTP----LRRCSELVAPAVDAQVFADAKAAVAKRARGQKSP 236
Query: 242 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 301
C++ IE G+ KE ++F EL R L H FFA RA K+P + G+
Sbjct: 237 VVCVEAIEMASQTSFADGMAKEREMFMELKNSAQHRALAHAFFADRALGKLPEIE--GIA 294
Query: 302 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 361
PR ++ + VIGGG MG+GIAT ++N + V L E + E L + TI NV G V +GKL
Sbjct: 295 PRTLKSIGVIGGGTMGAGIATGALMNGLSVTLIERDDEGLGRAKATIAKNVGGAVKKGKL 354
Query: 362 TQDKANNAL-KMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 420
+ ++ + L DY DVD+V+EAV E + +K+++F +L++ C +LATNT
Sbjct: 355 SAEQEQRIFDEALSLSTDYVSLSDVDLVVEAVFEDIDVKKQVFQKLDEVCKEGAVLATNT 414
Query: 421 STIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVP 480
S +D+N + T +IG HFFSPAH+M LLE+V ++T+ VI +GKI++KV
Sbjct: 415 SYLDVNAIAAVTKRPQDVIGLHFFSPAHIMKLLEVVVADKTAPDVIATGFQLGKIMRKVA 474
Query: 481 VVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVA 540
V G C GF NR Y +A +V G F +D + FG P+GP+ + DLAG +
Sbjct: 475 VRAGVCDGFIGNRILATYRAAADAIVVDGSTPFEVDDVMLEFGFPMGPYAVSDLAGLDIG 534
Query: 541 AATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGS-KPKPDPSVLPIIEE 599
AT K R D + + G G+ KG Y YE G+ K P+P+VL I+ E
Sbjct: 535 WATRKRKAPTRDPRERYFTFADRMCEQGWFGQKTSKGYYVYEDGARKGTPNPAVLDILTE 594
Query: 600 CRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPS 659
R+ I ++++++I++ + +VNE+ +V+EEGI +R D+D + G FP
Sbjct: 595 ERKEKQI----NAQNLSKEQILDRYMAAMVNEAAKVVEEGIALRPLDVDMTLIYGYGFPR 650
Query: 660 YRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+RGG + +AD +G + +++K ++Q F++P++ LEE G
Sbjct: 651 WRGGPMQYADEIGLEKILSNIKAYAQEDAYFWQPAKLLEELVASG 695
>gi|332530996|ref|ZP_08406918.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Hylemonella gracilis
ATCC 19624]
gi|332039557|gb|EGI75961.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Hylemonella gracilis
ATCC 19624]
Length = 701
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 270/711 (37%), Positives = 384/711 (54%), Gaps = 36/711 (5%)
Query: 9 EVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDIN 68
EV D VA+ITL NPPVN L G+ D E A + VK+IV+TG G FSGG DI
Sbjct: 6 EVRGD-VAVITLNNPPVNGLGYATRKGVTDGLERANADPKVKSIVITGAGRAFSGGADIR 64
Query: 69 VFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPK 128
F G + + ++ V+ E+ KP+VAA+ +A+GGGLEL +GCH RI AP
Sbjct: 65 EF------GTPKALQEPNLLSVIAAAENSAKPVVAALHTIAMGGGLELPLGCHYRIVAPG 118
Query: 129 TQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSE-----EGWKLGLIDAV 180
T++ LPE+ LG+IPG TQRLPR +G+ A+ MM+ + + +E G KL D V
Sbjct: 119 TKVALPEVKLGLIPGAGGTQRLPRALGVEPALNMMVSGEPVPAELLAQVPGQKL--FDKV 176
Query: 181 VTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGS---LSEAREVLKLARLQAKKTAPN 237
S E L + AL AR K +R L + L + L +A + AR A N
Sbjct: 177 AQSAETL-LDEALAL---AREKADVRPLPKVRDLPAKHPLGDA--YFQFARNTVGAMAKN 230
Query: 238 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 297
P C+D +E G+ E + F L+ R L HVF A+RA SK+ +V +
Sbjct: 231 FPAPLKCVDAVEAATKKKFDDGIAYEREHFINLMWTPECRALRHVFAAERAASKIADVPE 290
Query: 298 IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 357
K R ++ VAVIG G MG GI + I V + E E L +G+ TI N V
Sbjct: 291 DTPK-REIKSVAVIGAGTMGGGITMNFLNAGIPVKVLETKQEALDRGLATIRKNYEAQVG 349
Query: 358 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 417
+GKL QDK + +L L+Y + K D+VIEAV E + +K+ +F +L++ P ILA
Sbjct: 350 KGKLKQDKYEQRMALLSTTLNYDDIKYADLVIEAVFEEMGVKEAVFKKLDEVMKPGAILA 409
Query: 418 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 477
+NTST+DLN + T ++G HFFSPA+VM LLE+VR +T V+ +M + K IK
Sbjct: 410 SNTSTLDLNKIASFTKRPQDVVGLHFFSPANVMKLLEVVRGAKTGKDVLATVMALAKTIK 469
Query: 478 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGY 537
K VV G GF NR YS+ A L+ G ++D AI FG +GPF++ DLAG
Sbjct: 470 KTAVVSGVTDGFIGNRMIEQYSRQAGFLLEEGATPEQVDKAIEKFGFAMGPFRMGDLAGN 529
Query: 538 GVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVLPI 596
+ A K P + S D L + GR G+ G G Y Y+ G + P V +
Sbjct: 530 DIGWAIRKRRYVEKPGMKY-SKTADKLCELGRFGQKTGAGWYDYKPGKRDAIPSELVNQM 588
Query: 597 IEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMS 656
IE+ R+ I P ++E+EIVE +++ +VNE+ R+LEEGI +ASD+D + G
Sbjct: 589 IEDHRKALGITPR----KISEQEIVERLVYSLVNEAARILEEGIASKASDIDMVYLTGYG 644
Query: 657 FPSYRGGIVFWADAVGANYVYTSLKKWSQL---YGNFFKPSRFLEERATKG 704
FP +RGG + +AD VG V S+K++++ F++P+ L++ +G
Sbjct: 645 FPLWRGGPMQYADTVGLFNVAESMKRYAKNPLDDTQFWQPAPLLQKLVAEG 695
>gi|39936778|ref|NP_949054.1| enoyl-CoA hydratase [Rhodopseudomonas palustris CGA009]
gi|39650635|emb|CAE29158.1| enoyl-CoA hydratase [Rhodopseudomonas palustris CGA009]
Length = 699
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 252/704 (35%), Positives = 386/704 (54%), Gaps = 27/704 (3%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
V D VAI+T+ +PPVNAL+ + G+ + A + V+AIVL G F G
Sbjct: 4 VVTRATQDQVAIVTVDSPPVNALSAAVRRGILENVNAAVADPAVQAIVLVCAGRTFIAGA 63
Query: 66 DINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA 125
DI F K P ++ V+ +E+ KP +AA+ G ALGGGLE+A+GCH R+A
Sbjct: 64 DITEFGK-------PPQPP-ALNDVIAALENSPKPTIAAIHGTALGGGLEVALGCHFRVA 115
Query: 126 APKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 182
+ +LGLPE+ LG++PG TQRLPR VG A++M++ I + E K GL++ VV
Sbjct: 116 VKEAKLGLPEVKLGLLPGAGGTQRLPRAVGPELAVQMIVGGSPIGAAEALKHGLVEEVV- 174
Query: 183 SEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQ 242
E L+ + +A + A ++P R KL + R + A K A +
Sbjct: 175 -ENLVAGAVAFAKKVLAEKRPLRRLRDDDSKLAAAKADRSIFTNAVAAMTKKARGLEAPF 233
Query: 243 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 302
AC D I I G+ KE + F +LV+ D S+ + FFA+R +KV V D G KP
Sbjct: 234 ACADAIGAAIDLPFEEGLKKEREGFMKLVVSDQSKAQRYAFFAEREAAKVDGVPD-GTKP 292
Query: 303 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 362
R V +VA+IG G MG GIA + I V L E E L +G+ ++ N RG L
Sbjct: 293 RPVSRVAIIGAGTMGGGIAMSFANAGIPVTLIETGEEQLKRGLGIMQKNWEATAARGGLP 352
Query: 363 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 422
D + ++ G++ KD D++IEAV E++ +K+++F+ ++ P +LA+NTS
Sbjct: 353 PDAPAKRMALITGLVGLENVKDADLIIEAVFETMAVKKEVFTAVDAHAKPGAVLASNTSY 412
Query: 423 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 482
+ ++ + T ++G HFFSPA+VM L EIVR +T+ +L +++ K I KVPVV
Sbjct: 413 LSIDEIAATTKRPQDVLGMHFFSPANVMKLCEIVRGAKTAPDALLTAVSIAKKIAKVPVV 472
Query: 483 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAA 542
VG C GF NR S+ + L+ G ++D+ + FG+P+GPF + DLAG +
Sbjct: 473 VGVCDGFVGNRMLAARSKQSEKLLFEGALPQQVDAVVTKFGMPMGPFAMGDLAGLDIGWR 532
Query: 543 TSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECR 601
+ K DR +S + D L ++GR G+ GKG Y YE+GS+ P PDP V +I +
Sbjct: 533 SRK-------DRGIKSEIADALCEAGRFGQKTGKGYYKYEQGSRAPMPDPEVETLINDT- 584
Query: 602 RLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYR 661
L+ + G K +T++EI+E +++P++NE R+LEE I R SD+D + G +P YR
Sbjct: 585 -LAKL--GLKRRDITDEEILERMVYPMINEGARILEEKIAARPSDIDVVWLYGYGWPIYR 641
Query: 662 GGIVFWADAVGANYVYTSLKKWSQLYGN-FFKPSRFLEERATKG 704
GG + +AD+VG ++ L +++ + +P+ L A +G
Sbjct: 642 GGPMHYADSVGLKHIAERLSAYAKATNDPSLEPAPLLARLAAEG 685
>gi|335423412|ref|ZP_08552434.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Salinisphaera
shabanensis E1L3A]
gi|334891993|gb|EGM30238.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Salinisphaera
shabanensis E1L3A]
Length = 695
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 249/699 (35%), Positives = 392/699 (56%), Gaps = 31/699 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+ +IT+ NPPVNAL + G+ D ++ + D KA+++ G G F G DI F K
Sbjct: 13 IGVITVDNPPVNALGHAVRQGIVDALDKGLADDGAKALMIIGGGRTFPAGADIREFGK-- 70
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
+PDV V ++E+ K ++AAV G ALGGG+E+ +GC R+A ++GLP
Sbjct: 71 -PPQEPSLPDV-----VQVLENSDKLLIAAVHGTALGGGMEITLGCDYRVALDSAKMGLP 124
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE---ELLK 188
E+ LG++PG TQRLPRL+G A++ ++ K + + + +G+ID VV+ + E +
Sbjct: 125 EVNLGLLPGAGGTQRLPRLIGAKAAMQAIVEGKPMKAAKLKDMGVIDEVVSGDLKAEAIA 184
Query: 189 VSRLWALDIAARRKPWIRSLHR-TDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDV 247
+ D A RRK S+ + +D + S E +AR KK P H C+
Sbjct: 185 YAEKLVADGAPRRKVSELSVEKESDNVFSEFEQ----SIAR---KKRGFLAPFH--CIKA 235
Query: 248 IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRK 307
++ +G+ +E ++F EL+ S HVFFA+R KVP ++ K R +++
Sbjct: 236 VQAATELDFAAGMKRERELFTELLNSPESAAQRHVFFAEREVGKVPGISKETPK-RDIKQ 294
Query: 308 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 367
V +IG G MG GIA + I V + E+ E L KG+ I N +G++T D+
Sbjct: 295 VGIIGAGTMGGGIAMNFLSAGIPVKMLEMKQEALDKGVALIRKNYEATAKKGRMTSDQVE 354
Query: 368 NALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 427
+ ++ L Y + DVD+VIEAV E++ +K+++F EL++ C ILATNTST+D+N
Sbjct: 355 KCMSLISTSLSYDDLSDVDLVIEAVFENMKVKKQVFGELDRVCKDGAILATNTSTLDVNE 414
Query: 428 VGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 487
+ + T+ + +IG HFFSPA+VM LLE VR E TS +VI +M + K I KV V+VG C
Sbjct: 415 IAQSTNRPEDVIGMHFFSPANVMKLLENVRGEATSDEVIATVMDLSKRIGKVGVLVGVCN 474
Query: 488 GFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEF 547
GF NR A LV+ G ++D + FGLP+GPF + DLAG V +
Sbjct: 475 GFVGNRILHKRQAQAVKLVNEGATPSQVDKVLFDFGLPMGPFAMADLAGLDVGWRIREGL 534
Query: 548 DKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNI 606
+ P+ + + +D L + R G+ G G++ Y +G + P+P + + IE+ R+ I
Sbjct: 535 REDDPENAPERDWMDALAEQERWGQKTGGGVFDYAEGDRTPRPSDTAMAEIEKYRKEKGI 594
Query: 607 MPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVF 666
+ V+++EI+E L+ +VNE ++LEEGI +R D+D + G FP YRGG++F
Sbjct: 595 ----ETREVSDQEILERCLYVMVNEGAKILEEGIAMRPLDVDIVWIYGYGFPVYRGGLMF 650
Query: 667 WADAVGANYVYTSLKKWSQLYGN-FFKPSRFLEERATKG 704
WAD VG + ++ +K++ G+ ++PS LE+ A++G
Sbjct: 651 WADQVGLDKIHAKVKQFYDESGDPVWQPSALLEKLASEG 689
>gi|407699845|ref|YP_006824632.1| 3-hydroxyacyl-CoA dehydrogenase [Alteromonas macleodii str. 'Black
Sea 11']
gi|407248992|gb|AFT78177.1| 3-hydroxyacyl-CoA dehydrogenase [Alteromonas macleodii str. 'Black
Sea 11']
Length = 707
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 260/705 (36%), Positives = 378/705 (53%), Gaps = 32/705 (4%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
GVA +T+ + PVNAL+ I GL + A D V AIV+T + FSGG DI+ F
Sbjct: 14 QQGVATLTMQSAPVNALSRAIRVGLIEGINNALEDDSVSAIVITSSLPIFSGGADISEFS 73
Query: 72 KVHGAGDVS-LMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQ 130
GD+S ++P+V ++ IE+ KP+VA + G A GGGLE+A+ CH RI +
Sbjct: 74 ----GGDLSPMLPEV-----LDKIENASKPVVAVLPGPAFGGGLEVALACHHRITFADNK 124
Query: 131 LGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKL-GLIDAVVTS-EE 185
+GLPE+ LG++PG TQRLPRL ++EM++ K + KL G+ D + E
Sbjct: 125 VGLPEVNLGILPGAGGTQRLPRLADAQTSLEMIVTGKPTSV---VKLPGVFDKISDKPEH 181
Query: 186 LLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACL 245
LL+ ++ + L K R+ T L E + V Q KK A C+
Sbjct: 182 LLEDTKAY-LQALTPDKAIKRTCDIT--LSMSDETQAVFDAVTAQTKKAARGFFAPLKCI 238
Query: 246 DVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGV 305
+ + G+ E K+F E + +R H FFA+RA V + D R +
Sbjct: 239 EAVRGAYTLAFEDGLKNEGKLFMECMNTPQARAQQHFFFAERAAGHVSDF-DKNTPERNI 297
Query: 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDK 365
KVA+IG G MG GIA I V + E+ E L KG+ I N +GKLTQ++
Sbjct: 298 EKVAIIGAGTMGGGIAMNFANAGIPVTMLELKEEALEKGLALIRKNYENSAKKGKLTQEQ 357
Query: 366 ANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL 425
+ + +L G Y + DVD+VIEAV E + +K+ +FS L+K C P ILA+NTST+D+
Sbjct: 358 VESRMALLSGTTSYDDLADVDLVIEAVFEKMEVKKTVFSTLDKVCKPGAILASNTSTLDI 417
Query: 426 NIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 485
+ + TS + +IG HFFSPA+VM LLE+V+ E+TSA+VI M + K IKKV V+VG
Sbjct: 418 DEIATATSRPEDVIGLHFFSPANVMRLLEVVKAEKTSAEVIKTCMKMAKRIKKVAVLVGV 477
Query: 486 CTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSK 545
C GF NR PY + A LV G ++D + FG+P+GPF + D+AG + +
Sbjct: 478 CFGFVGNRMIEPYGREANRLVLEGATPEQVDRVLTEFGMPMGPFTMGDMAGLDIGYYVRQ 537
Query: 546 EFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPII-EECRRL 603
+ + D L++ GRNG G+G+Y YE GS+ P PDP VL I +E RL
Sbjct: 538 SRQEHIAHDPAYGAVADRLVEKGRNGLKAGRGVYNYEPGSRVPIPDPEVLEIAKQEAERL 597
Query: 604 SNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGG 663
+ + ++++EI+ +++ ++NE +LEEGI ++SD+D V G FP YRGG
Sbjct: 598 GVV----QRSDISDEEILVRVMYSLINEGAAILEEGIAAKSSDIDVIYVYGYGFPVYRGG 653
Query: 664 IVFWADAVGANYVYTSLKKWSQLYGNFFK----PSRFLEERATKG 704
+ +AD VG + L + G + K PS L + A G
Sbjct: 654 PMQYADEVGLGTILDKLTTYRDQLGEYGKMWLEPSDLLVKLAQSG 698
>gi|397688839|ref|YP_006526158.1| enoyl-CoA hydratase [Pseudomonas stutzeri DSM 10701]
gi|395810395|gb|AFN79800.1| enoyl-CoA hydratase [Pseudomonas stutzeri DSM 10701]
Length = 701
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 256/708 (36%), Positives = 383/708 (54%), Gaps = 33/708 (4%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D +A+I NPPVNAL + GL F+ A + V+A+VL G F G DI F
Sbjct: 10 RDEIALIIADNPPVNALGQALRQGLLQAFQAAEADPQVRAVVLVCEGSTFFAGADIKEFG 69
Query: 72 KVHGAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKT 129
K P V+ L V+++IE C KP VA + G ALGGGLE+A+GCH RIA
Sbjct: 70 K----------PPVAPSLPEVIDVIEGCSKPSVAVIHGTALGGGLEVALGCHYRIARADA 119
Query: 130 QLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE-- 184
++GLPE+ LG++PG TQRLPRL G++KA++M+L + ++E + L+D + +
Sbjct: 120 KVGLPEVKLGLLPGAGGTQRLPRLAGVAKALDMILSGAPVEAKEACEHQLVDELFEGDLV 179
Query: 185 --ELLKVSRLWALDIAARRK-PWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 241
L RL D RR R L D +L AR + K +P +
Sbjct: 180 DAGLAYARRLLQEDRGVRRSGEQTRGLEGADN-AALIAARHA------EVVKRSPGLFSP 232
Query: 242 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 301
C+ +E G+ +E ++F E + LVH FFA+R SK+ ++ +
Sbjct: 233 LRCIAAVEAATRLPLVEGLARERELFLECLNSPQRAALVHTFFAERQASKIADLP-ADTR 291
Query: 302 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 361
PR +R AVIGGG MG GIA + V L EV+ E L + ++ V RG L
Sbjct: 292 PREIRTAAVIGGGTMGVGIALCFANAGVPVKLLEVSDEALQRALQRARDTYAISVKRGSL 351
Query: 362 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 421
++ L +++G+ DY+ DVD+V+EAV E + +KQ++F L+ C P ILA+NTS
Sbjct: 352 SEAAMAQRLALIEGITDYAALADVDLVVEAVFEDMAVKQQVFERLDAVCKPGAILASNTS 411
Query: 422 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 481
++DLN + T ++G HFFSPA+VM LLE+VR +TS +V+ M +G+ +KKV V
Sbjct: 412 SLDLNAIAAFTRRPQDVVGLHFFSPANVMRLLEVVRGAQTSHEVLATAMAIGRKLKKVAV 471
Query: 482 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAA 541
VVG C GF NR F Y + A L+ G ++D+ +R+FG+ +GPF + DLAG +
Sbjct: 472 VVGVCDGFVGNRMLFQYGREAEFLLEEGATPQQVDAVLRNFGMAMGPFAVRDLAGLDIGQ 531
Query: 542 ATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEEC 600
A K P + D L +G G+ G G Y YE G++ P +P++ P++
Sbjct: 532 AIRKRQRAILPAHLEFPTVADRLCAAGMLGQKTGVGYYRYEPGNRTPLENPALAPMLAAA 591
Query: 601 RRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSY 660
R I + + ++ IVE L+ +VNE ++LEEGI R+SD+D + G FP++
Sbjct: 592 SREKGI----ERRELDKQYIVERTLYSLVNEGAKILEEGIAQRSSDIDIIYLNGYGFPAW 647
Query: 661 RGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLS 708
RGG +F+AD+VG V +K+ G++++P+ LE+ A +G S
Sbjct: 648 RGGPMFYADSVGLANVLAKVKELHARCGDWWRPAPLLEKLAAEGRTFS 695
>gi|406596554|ref|YP_006747684.1| 3-hydroxyacyl-CoA dehydrogenase [Alteromonas macleodii ATCC 27126]
gi|406373875|gb|AFS37130.1| 3-hydroxyacyl-CoA dehydrogenase [Alteromonas macleodii ATCC 27126]
Length = 707
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 262/707 (37%), Positives = 383/707 (54%), Gaps = 40/707 (5%)
Query: 14 GVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKV 73
GVA +T+ + PVNAL+ I GL + A D V+AIV+T + FSGG DI+ F
Sbjct: 16 GVATLTMQSAPVNALSRAIRVGLIEGINNALDDDSVRAIVITSSLPIFSGGADISEFS-- 73
Query: 74 HGAGDVS-LMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
GD+S ++P+V ++ IE+ KP+VA + G A GGGLE+A+ CH RI ++G
Sbjct: 74 --GGDLSPMLPEV-----LDKIENASKPVVAVLPGPAFGGGLEVALACHHRITFADNKVG 126
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKL-GLIDAVVTS-EELL 187
LPE+ LG++PG TQRLPRL ++EM++ K + KL G+ D + E LL
Sbjct: 127 LPEVNLGILPGAGGTQRLPRLADAQTSLEMIVTGKPTSV---VKLPGVFDKISDKPEHLL 183
Query: 188 KVSR--LWAL--DIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQA 243
+ ++ L AL D A +R I +L +D E + V Q KK
Sbjct: 184 EDTKAYLQALTPDKAIKRTSDI-TLSMSD------ETQAVFDAVTAQTKKATRGFFAPLK 236
Query: 244 CLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPR 303
C++ + G+ E K+F E + +R H FFA+RA V + D R
Sbjct: 237 CIEAVRGAYTLAFEDGLKNEGKLFMECMNTPQARAQQHFFFAERAAGHVSDF-DKNTPER 295
Query: 304 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQ 363
+ KVA+IG G MG GIA I V + E+ E L KG+ I N +GKLTQ
Sbjct: 296 NIDKVAIIGAGTMGGGIAMNFANAGIPVTMLELKEEALEKGLALIRKNYENSAKKGKLTQ 355
Query: 364 DKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI 423
++ + + +L G Y + DVD+VIEAV E + +K+ +FS L+K C P ILA+NTST+
Sbjct: 356 EQVESRMALLSGTTSYDDLADVDLVIEAVFEKMEVKKTVFSTLDKVCKPGAILASNTSTL 415
Query: 424 DLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVV 483
D++ + TS + +IG HFFSPA+VM LLE+V+ E+TSA+VI M + K IKKV V+V
Sbjct: 416 DIDEIATATSRPEDVIGLHFFSPANVMRLLEVVKAEKTSAEVIKTCMKMAKRIKKVAVLV 475
Query: 484 GNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAAT 543
G C GF NR PY + A L+ G ++D + FG+P+GPF + D+AG +
Sbjct: 476 GVCFGFVGNRMIEPYGREANRLLLEGATPEQVDRVLTEFGMPMGPFTMGDMAGLDIGYYV 535
Query: 544 SKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPII-EECR 601
+ + + D L++ GRNG G+G Y YE GS+ P PDP VL I +E
Sbjct: 536 RQSRQEHIAHDPAYGAVADRLVEKGRNGLKTGRGAYNYEPGSRVPVPDPEVLEIAKQEAE 595
Query: 602 RLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYR 661
RL + + ++++EI+ +++ ++NE +LEEGI ++SD+D V G FP YR
Sbjct: 596 RLGVV----QRSDISDEEILVRVMYSLINEGAAILEEGIAAKSSDIDVIYVYGYGFPVYR 651
Query: 662 GGIVFWADAVGANYVYTSLKKWSQLYGNFFK----PSRFLEERATKG 704
GG + +AD VG + L + G++ K PS L + A G
Sbjct: 652 GGPMQYADEVGLGTILDKLTTYRDQLGDYGKMWLEPSDLLVKLAQSG 698
>gi|209517039|ref|ZP_03265887.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia sp. H160]
gi|209502570|gb|EEA02578.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia sp. H160]
Length = 696
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 251/681 (36%), Positives = 370/681 (54%), Gaps = 26/681 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+DGVA++TL NPPVN L + AG+ + + A + VKAIVLTG G FSGG DI F
Sbjct: 8 HDGVAVLTLNNPPVNGLGLSTRAGIVEGLDRAQNDPAVKAIVLTGAGKAFSGGADITEFN 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ +L V+ +E KP+VAA+ +A+GGGLELA+G H R+AA Q+
Sbjct: 68 TPKATQEPTLA------TVIEAVEGSAKPVVAAIHSVAMGGGLELALGAHYRVAAAGAQI 121
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
LPE+ LG++PG TQRLPR +GL ++ M++ + S++ GL D VV + L
Sbjct: 122 ALPEVKLGILPGAGGTQRLPRAIGLEASLNMIVSGAPVLSDKLADSGLFDEVVANPAELA 181
Query: 189 VSRLWA---LDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACL 245
+ L + A P +R D+ A ++ AR A + P C+
Sbjct: 182 EAALAFARKVGAQAGSHPKVR-----DRKIEHPNAAGFIQFARNSVAAIAKDFPAPHKCI 236
Query: 246 DVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRG 304
D +E G+ G G+ E + F LV SR L H FF +RA SK+P+V +D + R
Sbjct: 237 DAVEAGVKDGFDKGLAFERECFVALVQTPESRALRHAFFGERAASKIPDVPSDTPV--RD 294
Query: 305 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 364
+ VAVIG G MG GIA + I V L E E L +G+ TI N V +GKL +
Sbjct: 295 INHVAVIGAGTMGGGIAMNFLNAGIPVTLLETKQEALDRGLATIRKNYEATVKKGKLKPE 354
Query: 365 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 424
L +L L Y + K D+++EAV E + +K+++F L++ P ILA+NTST+D
Sbjct: 355 VMEQRLALLTPTLSYDDLKQADLIVEAVFEELGVKEQVFRRLDEVAKPGAILASNTSTLD 414
Query: 425 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 484
++ + T ++G HFFSPA+VM LLE+VR + T+ V+ +M + K IKK VV G
Sbjct: 415 VDKIAAFTKRPQDVVGMHFFSPANVMKLLEVVRGKETAKDVLATVMKLAKKIKKTAVVSG 474
Query: 485 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATS 544
C GF NR Y + A ++ G ++D AI FG +GPF++ DLAG + A
Sbjct: 475 VCDGFIGNRMIEQYVRQALFMLEEGALPAQVDKAIEKFGFAMGPFRMSDLAGNDIGWAIR 534
Query: 545 KEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVLPIIEECRRL 603
K PD + S + D L + GR G+ G G Y Y+ G + P V +I E +
Sbjct: 535 KRRYLERPDMLY-SKIADRLCEMGRFGQKTGGGWYDYKAGDRTAYPSSVVNEMISEYSKE 593
Query: 604 SNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGG 663
+N + ++++EIVE ++F +VNE ++LEEGI +ASD+D + G FP YRGG
Sbjct: 594 TN----SERRKISDEEIVERLVFALVNEGAKILEEGIASKASDIDMVYLTGYGFPLYRGG 649
Query: 664 IVFWADAVGANYVYTSLKKWS 684
+ +AD VG V ++++++
Sbjct: 650 PMLYADTVGLYNVERAIRRYA 670
>gi|381393975|ref|ZP_09919693.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola punicea DSM 14233 =
ACAM 611]
gi|379330247|dbj|GAB54826.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola punicea DSM 14233 =
ACAM 611]
Length = 682
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 259/697 (37%), Positives = 388/697 (55%), Gaps = 37/697 (5%)
Query: 20 LINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDV 79
+ N PVNAL+ I GL D A + D+V+AIV+T FS G DI+ F +GD+
Sbjct: 1 MANKPVNALSKAIRTGLIDAMNMALANDNVEAIVITSELALFSAGADISEFS----SGDL 56
Query: 80 S-LMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTL 138
+ ++PDV + L+E+ KP+VAAV G A GGGLELA+ CH R++ ++GLPE+ L
Sbjct: 57 APILPDV-----LTLVENSSKPVVAAVNGGAFGGGLELALACHYRLSTNHNKVGLPEVHL 111
Query: 139 GVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWAL 195
G++PG TQRLPRL+ KA++M++ + + +L + ++V ELL + A+
Sbjct: 112 GILPGAGGTQRLPRLIAPEKALQMIVTGAPTSVKAISELFV--SIVEPSELL----VQAI 165
Query: 196 DIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHG 255
+A + + KL S E + + ++Q A C++ ++
Sbjct: 166 KVAKQAVGKVIPATSLIKLSSSPEIEALCEQTKVQTSAKARGFFAPAKCIEAVKAAFELP 225
Query: 256 GYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT-DIGLKPRGVRKVAVIGGG 314
G+ +E ++F+E + +R H FFA+R +P + D L R +++VA+IG G
Sbjct: 226 FAQGLKREGELFEECMHTPQARAQQHFFFAERVAGALPQIAKDTAL--RDIKQVAIIGAG 283
Query: 315 LMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLK 374
MG GIA I VVL E+ L KG++ I N +GKLTQ++ +++L
Sbjct: 284 TMGGGIAMNFANVGIPVVLLELEQAALDKGLELIRRNYENSAKKGKLTQEQVEQRMELLT 343
Query: 375 GVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSS 434
G Y + +VD+VIEAV E + +K+++F L+K C P ILA+NTST+DL+ + + TS
Sbjct: 344 GTTSYDDLSEVDLVIEAVFEKMSVKKQVFEALDKVCKPGAILASNTSTLDLDEIAQCTSR 403
Query: 435 QDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRA 494
+ +IG HFFSPA+VM LLEIV+ +T+ VI M + K IKKV V+VG C GF NR
Sbjct: 404 EQDVIGLHFFSPANVMKLLEIVQGAKTADDVIKTAMHLAKTIKKVGVLVGVCFGFVGNRM 463
Query: 495 FFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAA---ATSKEFDKAF 551
Y + A L+ G +ID I FGLP+GPF + D+AG + + KEF
Sbjct: 464 IEVYGREAGRLMLEGATPQQIDKVIYDFGLPMGPFTMGDMAGLDIGYFVRQSRKEFISHD 523
Query: 552 PDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGG 610
P + D L+++GR G GKG+Y Y+ GS+ P PDPSVL I + R+ + G
Sbjct: 524 PSY---CTVADELVEAGRVGLKAGKGVYLYDAGSRSPIPDPSVLDIAK--RKAKEL--GI 576
Query: 611 KPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADA 670
+ ++++EI+E ++P++NE +L EGI RASD+D V G FP YRGG + +AD
Sbjct: 577 QRRDISDQEILERCIYPLINEGANILLEGIAQRASDIDVIYVYGYGFPVYRGGPMKFADE 636
Query: 671 VGANYVYTSLKKWSQLYGNF----FKPSRFLEERATK 703
+G V +K + G + F PS LEE A K
Sbjct: 637 IGVKEVLARMKHYETALGEYGKHWFTPSPLLEELAQK 673
>gi|294146813|ref|YP_003559479.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingobium japonicum UT26S]
gi|292677230|dbj|BAI98747.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingobium japonicum UT26S]
Length = 687
Score = 410 bits (1055), Expect = e-111, Method: Compositional matrix adjust.
Identities = 256/694 (36%), Positives = 375/694 (54%), Gaps = 29/694 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A++T+ +PPVNAL + + L A + +++A++L G FS G DI+ F K
Sbjct: 13 IAVLTIDSPPVNALGLDVRRALLKYISMAEADPEIEAVILACAGQTFSAGADISEFGKPF 72
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
A PD+ V V IE+ K IVAA+ G ALGGGLE+A+ CH RIA P +LGLP
Sbjct: 73 QA------PDLGV--VCRHIENSSKIIVAAIHGTALGGGLEVALCCHYRIAVPSARLGLP 124
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 191
E+ LG++PG TQR+PRL+G KA+E + +++ ++G++D V L+ +
Sbjct: 125 EVALGLLPGAGGTQRIPRLIGARKALEFITGGAPVSASAAREMGIVDEVADEGALVGSAL 184
Query: 192 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 251
+ + A P R D++ + + E+ R + ++ + IE
Sbjct: 185 EYVRKLIAGGAPLRRVRDLEDRIAADRQQPELFDEFRRSNARAFRGKDAPESIVKAIEAA 244
Query: 252 IVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT-DIGLKPRGVRKVAV 310
+ G+ +E ++F EL ++ +H FFA+R SKV +V D + P VR V V
Sbjct: 245 VALPFEEGLAREFELFVELEKGLQAKAQIHAFFAERTASKVKDVPGDTPVLP--VRTVGV 302
Query: 311 IGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNAL 370
+G G MG GIA + I V + E L +GI TI N + RGKLT + +
Sbjct: 303 VGAGTMGGGIAMNFLNVGIPVHIVETAQANLDRGIATIRKNYEISLKRGKLTAEALERRM 362
Query: 371 KMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGE 430
+L LD + +D D++IEAV ES+PLKQ+IF++L+ ILA+NTS +DLN +
Sbjct: 363 SLLHATLDLGDLRDCDLIIEAVFESMPLKQEIFAKLDAVARDGAILASNTSFLDLNQIAR 422
Query: 431 KTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFA 490
TS D +IG HFFSPA+VMPLLE+VR + T+ V+ M + + I KVPV+ G C GF
Sbjct: 423 ATSRPDHVIGLHFFSPANVMPLLEVVRGDATAKPVVATAMKLARKIGKVPVLSGVCDGFI 482
Query: 491 VNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKA 550
NRA ++ A LL+ + ID+AI +G +GPF++LDL G V S E
Sbjct: 483 ANRAMRARTEQADLLLLQNLSPDAIDAAIYDYGFAMGPFRMLDLVGLDVIGRDSTE---- 538
Query: 551 FPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGG 610
RS LV +GR G+ +G G Y Y++ +P + L II R G
Sbjct: 539 ---RSVAKDLV----AAGRMGQKSGGGYYDYDEARAARPSEAALDII----RAHAAWKGI 587
Query: 611 KPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADA 670
S +++EIV +L PVVNE ++LEEGI +RASD+D A + G ++P GG +FWADA
Sbjct: 588 AQRSFSQEEIVARLLHPVVNEGAKILEEGIAMRASDIDVAMIKGYNWPVQTGGPMFWADA 647
Query: 671 VGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
VG + ++K G +PSR L E A G
Sbjct: 648 VGLPRIVETMKALEAEQGEAMRPSRLLVELAESG 681
>gi|333915071|ref|YP_004488803.1| 3-hydroxybutyryl-CoA epimerase [Delftia sp. Cs1-4]
gi|333745271|gb|AEF90448.1| 3-hydroxybutyryl-CoA epimerase [Delftia sp. Cs1-4]
Length = 699
Score = 410 bits (1055), Expect = e-111, Method: Compositional matrix adjust.
Identities = 259/719 (36%), Positives = 393/719 (54%), Gaps = 36/719 (5%)
Query: 6 VTMEVGNDG-VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGG 64
+T E DG +A+ITL NPPVN L + G+ + ++A S VKAIV+TG G FSGG
Sbjct: 1 MTAEYKVDGAIAVITLNNPPVNGLGLSTRRGIVEGLDKAYSDPAVKAIVITGAGKAFSGG 60
Query: 65 FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
DIN F K + L+ ++N ++ KP+VAA+ + +GGGLELA+GC+ R+
Sbjct: 61 ADINEFGKEEAYREPHLVS------LINSLDQGSKPVVAAIHTVCMGGGLELALGCNYRV 114
Query: 125 AAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSE-----EGWKLGL 176
AAP T + LPE+ LG++PG TQRLPR++G+ A+ M++ + + SE G KL
Sbjct: 115 AAPGTLVALPEVKLGLLPGAGGTQRLPRVLGVETALNMIVSGEPVKSELLASIPGQKL-- 172
Query: 177 IDAVVTS-EELLKVSRLWALDIAARRK-PWIRSLHRTDKLGSLSEAREVLKLARLQAKKT 234
D + S E LL ++ +AL++A +R P +R L G + AR K
Sbjct: 173 FDKMAASPESLLDEAKAFALEVADKRPLPRVRDLPCKHPQGD-----AYFQFARNMVKGM 227
Query: 235 APNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPN 294
A N P C+D +E G+ E F +L+ SR L H+F A+RA SK+ +
Sbjct: 228 AKNYPAPARCVDTVENAARKKFDEGMALERDAFMQLMWSPESRALRHLFMAERAASKIAD 287
Query: 295 V-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVR 353
V +D + R ++ V VIG G MG GI+ + I V + E E L +G+ TI N
Sbjct: 288 VPSDTAV--RDIKTVGVIGAGTMGGGISMNFLNAGIPVTILETKQEALDRGVATIRKNYE 345
Query: 354 GLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPH 413
V +GKLTQ+K + + +L L Y K+ D++IEAV E + +K+ +F +L++ P
Sbjct: 346 AQVKKGKLTQEKYDQRMALLSTTLSYDALKNADLIIEAVFEELGVKETVFKQLDEVAKPG 405
Query: 414 CILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVG 473
ILA+NTST+D++ + T ++G HFFSPA+VM LLE+VR + T+ V+ +M +
Sbjct: 406 AILASNTSTLDVDKIAAFTKRPQDVVGMHFFSPANVMKLLEVVRGKHTAKDVLATVMKLA 465
Query: 474 KIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLD 533
K IKK VV G C GF NR YS+ A L+ G ++D AI FG +GPF++ D
Sbjct: 466 KKIKKTAVVSGVCDGFIGNRMIEQYSRQAGFLLDEGATPAQVDKAIEKFGFAMGPFRMGD 525
Query: 534 LAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPS 592
LAG + A K D + S D L + GR G+ G G Y Y+ G + P
Sbjct: 526 LAGNDIGWAIRKRRAVERADMKY-SRTADKLCELGRFGQKTGAGWYDYQAGKRDAIPSEL 584
Query: 593 VLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASV 652
V +IE R+ I P ++++EIV+ ++F +VNE +LE+GI ++ D+D +
Sbjct: 585 VNQMIESHRKELGIT----PRKISDEEIVQRLVFALVNEGAHILEDGIAGKSGDIDMVYL 640
Query: 653 LGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL---YGNFFKPSRFLEERATKGIPLS 708
G FP +RGG + +A VG V ++ ++++ +F++P+ L + A +G S
Sbjct: 641 TGYGFPIWRGGPMHYAGEVGLFNVVQAMNRFAKNPNDDADFWQPAPLLAKLAAEGKQFS 699
>gi|407687498|ref|YP_006802671.1| 3-hydroxyacyl-CoA dehydrogenase [Alteromonas macleodii str.
'Balearic Sea AD45']
gi|407290878|gb|AFT95190.1| 3-hydroxyacyl-CoA dehydrogenase [Alteromonas macleodii str.
'Balearic Sea AD45']
Length = 707
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 262/707 (37%), Positives = 382/707 (54%), Gaps = 40/707 (5%)
Query: 14 GVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKV 73
GVA +T+ + PVNAL+ I GL + A D V AIV+T + FSGG DI+ F
Sbjct: 16 GVATLTMQSAPVNALSRAIRVGLIEGINNALDDDSVSAIVITSSLPIFSGGADISEFS-- 73
Query: 74 HGAGDVS-LMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
GD+S ++P+V ++ IE+ KP+VA + G A GGGLE+A+ CH RI ++G
Sbjct: 74 --GGDLSPMLPEV-----LDKIENASKPVVAVLPGPAFGGGLEVALACHHRITFADNKVG 126
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKL-GLIDAVVTS-EELL 187
LPE+ LG++PG TQRLPRL ++EM++ K + KL G+ D + E LL
Sbjct: 127 LPEVNLGILPGAGGTQRLPRLADAQTSLEMIVTGKPTSV---VKLPGVFDKISDKPEHLL 183
Query: 188 KVSR--LWAL--DIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQA 243
+ ++ L AL D A +R I +L +D E + V Q KK
Sbjct: 184 EDTKAYLQALMPDKAIKRTSDI-TLSMSD------ETQAVFDAVTAQTKKATRGFFAPLK 236
Query: 244 CLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPR 303
C++ + G+ E K+F E + +R H FFA+RA V + D R
Sbjct: 237 CIEAVRGAYTLAFEDGLKNEGKLFMECMNTPQARAQQHFFFAERAAGHVSDF-DKNTPER 295
Query: 304 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQ 363
+ KVA+IG G MG GIA I V + E+ E L KG+ I N +GKLTQ
Sbjct: 296 NIDKVAIIGAGTMGGGIAMNFANAGIPVTMLELKEEALEKGLALIRKNYENSAKKGKLTQ 355
Query: 364 DKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI 423
++ + + +L G Y + DVD+VIEAV E + +K+ +FS L+K C P ILA+NTST+
Sbjct: 356 EQVESRMALLSGTTSYDDLADVDLVIEAVFEKMEVKKTVFSTLDKVCKPGAILASNTSTL 415
Query: 424 DLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVV 483
D++ + TS + +IG HFFSPA+VM LLE+V+ E+TSA+VI M + K IKKV V+V
Sbjct: 416 DIDEIATATSRPEDVIGLHFFSPANVMRLLEVVKAEKTSAEVIKTCMKMAKRIKKVAVLV 475
Query: 484 GNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAAT 543
G C GF NR PY + A L+ G ++D + FG+P+GPF + D+AG +
Sbjct: 476 GVCFGFVGNRMIEPYGREANRLLLEGATPEQVDRVLTEFGMPMGPFTMGDMAGLDIGYYV 535
Query: 544 SKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPII-EECR 601
+ + + D L++ GRNG G+G Y YE GS+ P PDP VL I +E
Sbjct: 536 RQSRQEHIAHDPAYGAVADRLVEKGRNGLKTGRGAYNYEPGSRVPVPDPEVLEIAKQEAE 595
Query: 602 RLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYR 661
RL + + ++++EI+ +++ ++NE +LEEGI ++SD+D V G FP YR
Sbjct: 596 RLGVV----QRSDISDEEILVRVMYSLINEGAAILEEGIAAKSSDIDVIYVYGYGFPVYR 651
Query: 662 GGIVFWADAVGANYVYTSLKKWSQLYGNFFK----PSRFLEERATKG 704
GG + +AD VG + L + G++ K PS L + A G
Sbjct: 652 GGPMQYADEVGLGTILDKLTTYRDQLGDYGKMWLEPSDLLVKLAQSG 698
>gi|429218881|ref|YP_007180525.1| 3-hydroxyacyl-CoA dehydrogenase [Deinococcus peraridilitoris DSM
19664]
gi|429129744|gb|AFZ66759.1| 3-hydroxyacyl-CoA dehydrogenase [Deinococcus peraridilitoris DSM
19664]
Length = 703
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 246/707 (34%), Positives = 395/707 (55%), Gaps = 22/707 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA++T+ NPPVN + + G+K E + +VKA VL G G F G D+ F
Sbjct: 13 VAVLTINNPPVNVFSPGVPEGIKAGLERGNADPEVKAFVLIGGGRSFIAGADVKTFNLPR 72
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
PD+ + +E KP+VAA+ G ALGGGLE+AMGCH R+A+ ++G P
Sbjct: 73 -----EQQPDMRG--TIAKLEANPKPVVAAMHGNALGGGLEVAMGCHYRVASRALKVGQP 125
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 191
E+ LGVIPG TQRLPR++ L +A+ M++ I++E+ + GLID ++ + L +
Sbjct: 126 EVKLGVIPGAGGTQRLPRVIPLQEALTMIVTGNPISAEKAHEFGLIDELIEGDLLEGAVQ 185
Query: 192 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 251
+ P IR R KL A +A + +K A + CL+ ++
Sbjct: 186 FAQRAGESGELPKIRD--RDVKLDI--PAHMFFNVATERVRKEARGLIAPLLCLEAVKGA 241
Query: 252 IVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVI 311
+ G+ +E ++F + D SRGL H+FFA+R +K+ N D +KPR +R V+
Sbjct: 242 VELPFDEGLQREGELFLQAQRSDQSRGLRHIFFAEREAAKI-NGVDRSVKPREIRSAGVL 300
Query: 312 GGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALK 371
G G MG GIA I V + E N+E L +G+ TI N +G+LT ++ +
Sbjct: 301 GAGTMGGGIAMNFANAGIPVTIYEANAENLERGLATIRRNYENTAKKGRLTLEQVEERMA 360
Query: 372 MLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEK 431
+++G L + + D D VIEAV E + +K+++F L+ C P ILA+NTST+D+N +
Sbjct: 361 LIRGTLSFEDLADADYVIEAVFEDMNVKREVFGRLDAVCKPGAILASNTSTLDVNEIARA 420
Query: 432 TSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAV 491
TS ++++G HFFSPA+VM LLEIVR ++ Q ++ + + K + KV VVVG C GF
Sbjct: 421 TSRPEQVLGMHFFSPANVMKLLEIVRPDKVDDQTLVTSVQLAKTLGKVGVVVGVCDGFVG 480
Query: 492 NRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAA-TSKEFDKA 550
NR Y + A+ +V G ++D A+ + GLP+GPF++ D+AG + A ++ +A
Sbjct: 481 NRMINQYGREAQQMVEEGASPRQVDDAMHALGLPMGPFEMSDMAGLDIGYAIRQRQAQEA 540
Query: 551 FPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGG 610
++S +D ++++GR G+ G G+Y+Y G P+ DP II++ R +
Sbjct: 541 GREKS--DTFMDRIVEAGRKGQKTGAGVYSYANGRTPEVDPVAEQIIQDSRAEKGV---- 594
Query: 611 KPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADA 670
+P +T++EI + +++ +VNE ++LEEGI RASD+D V G FP+ RGG + +A+
Sbjct: 595 EPRELTQEEITKRLVYQLVNEGAKILEEGIAQRASDIDVIYVYGYGFPASRGGPMHYAET 654
Query: 671 VGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSAPVSSSSTS 717
VG V +K++ + +G+ +KP+ LE +G +S+ ++
Sbjct: 655 VGLENVLADIKEFHEQHGDTWKPAPLLERLVREGKTFRDALSAQPSA 701
>gi|91978018|ref|YP_570677.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Rhodopseudomonas
palustris BisB5]
gi|91684474|gb|ABE40776.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Rhodopseudomonas palustris BisB5]
Length = 699
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 250/698 (35%), Positives = 388/698 (55%), Gaps = 27/698 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+D +A++T+ +PPVNAL+ + G+ D A + +V+AIVLT G F G DI F
Sbjct: 10 HDVIAVVTVDSPPVNALSAAVRRGILDNVNAAVADPEVQAIVLTCAGRTFIAGADITEF- 68
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
G + P S+ V+ +E+ KP +AA+ G ALGGGLE+A+GCH R+A +L
Sbjct: 69 -----GKPAQPP--SLNDVIAALENSPKPTIAAIHGTALGGGLEVALGCHFRVAVKDARL 121
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
GLPE+ LG++PG TQRLPR VG A++M++ I + + K GLI+ VV E+ +
Sbjct: 122 GLPEVKLGLLPGAGGTQRLPRAVGPELAVQMIVGGNPIGAADALKHGLIEEVV--EDRVA 179
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 248
+A + A ++P R KL + R + A K A + AC D I
Sbjct: 180 GGVAFARKVLAEKRPTRRLRDDDSKLAAARADRSIFTNAVASMTKKARGLEAPFACADAI 239
Query: 249 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 308
I G+ KE + F +LV+ D S+ + FFA+R +KV V D G KPR V +V
Sbjct: 240 GAAIDLPFEQGLAKEREGFLKLVVSDQSKAQRYAFFAEREAAKVDGVPD-GAKPRPVARV 298
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
A+IG G MG GIA + I V L E E L +G+ ++ N RG + D
Sbjct: 299 AIIGAGTMGGGIAMSFANAGIPVTLIETGKEQLDRGMGIMQKNYEATAARGGIPADAPAK 358
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
+ ++ GV+ KD D++IEAV E++ +K+++F+ L+ P +LA+NTS ++++ +
Sbjct: 359 RMGLITGVVGLENVKDADLIIEAVFETMAVKKEVFTALDAYAKPGAVLASNTSYLNVDEI 418
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
T ++G HFFSPA+VM L EIVR +T+ +L +++ K I KVPVV G C G
Sbjct: 419 AATTKRPQDVLGMHFFSPANVMKLCEIVRGAKTAPDALLTAVSIAKKIAKVPVVAGVCDG 478
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR S+ + L+ G ++D+ + FG+P+GPF + DLAG + + +
Sbjct: 479 FIGNRMLAARSKQSEKLLFEGALPQQVDAVVTKFGMPMGPFAMGDLAGLDIGWRSRQ--- 535
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIM 607
DR +S + D L ++GR G+ GKG Y YE+GS+ P PDP V +I + L+ +
Sbjct: 536 ----DRGIKSEIADALCEAGRFGQKTGKGYYKYEQGSRSPLPDPEVETLINDT--LTKL- 588
Query: 608 PGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFW 667
G K V+++EI+E +++P++NE R+LEE I R SD+D + G +P YRGG + +
Sbjct: 589 -GLKRREVSDEEILERMVYPMINEGARILEEKIAARPSDIDVVWLYGYGWPIYRGGPMHY 647
Query: 668 ADAVGANYVYTSLKKWSQLYGN-FFKPSRFLEERATKG 704
AD+VG ++ L +++ + +P+ L+ A +G
Sbjct: 648 ADSVGLKHIAERLAFYAKATNDPSLEPAPLLKRLAEEG 685
>gi|121608757|ref|YP_996564.1| 3-hydroxyacyl-CoA dehydrogenase [Verminephrobacter eiseniae EF01-2]
gi|121553397|gb|ABM57546.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
[Verminephrobacter eiseniae EF01-2]
Length = 699
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 257/704 (36%), Positives = 386/704 (54%), Gaps = 33/704 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA+IT+ NPPVN L + GL D A + V AIV+TG G FSGG DIN F
Sbjct: 11 VAVITMANPPVNGLGLATRQGLVDGLLRADADAAVSAIVITGAGSAFSGGADINEFGTDK 70
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
A + L+ V+ +IE+ KP+VAA+ +A+GGGLELA+GCH RIAAP ++ LP
Sbjct: 71 SAQEPHLLS------VIAVIENSSKPVVAALHSVAMGGGLELALGCHYRIAAPSCRIALP 124
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSE-----EGWKLGLIDAVVTSEEL 186
E+ LG+IPG TQRLPR +G+ A+ +++ +S+ SE G KL +D + TS +
Sbjct: 125 EVKLGLIPGAGGTQRLPRALGVEAALNLIVSGESVNSEMIGALPGQKL--LDKLSTSAQA 182
Query: 187 LKVSRLWALD--IAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 244
L L AAR P +R+L E + + AR K + N P C
Sbjct: 183 LAAEALAFAQGVAAARPLPLVRNLPCRH-----PEGQAYFQFARNMVKGMSRNFPAPALC 237
Query: 245 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRG 304
+D +E G+ E +F +L+ SR L H+F A+RA SK+P+V + R
Sbjct: 238 VDAVEAATRGPFADGMQIERAIFMKLMQTPESRALRHLFMAERAASKIPDVPSDTPR-RD 296
Query: 305 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 364
+R VAVIG G MG GIA + + V + E+ + L +G+ TI N V +GKLTQD
Sbjct: 297 IRAVAVIGAGTMGGGIAMNFLNAGLPVKILEMKPQALERGLATIGKNYEAQVKKGKLTQD 356
Query: 365 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 424
K + +L LDY++ +D D+VIEAV E + +K+ +F +L+ P ILA+NTST+D
Sbjct: 357 KYQQRMALLSTTLDYADIRDADLVIEAVFEDLGVKESVFRQLDAQMKPGAILASNTSTLD 416
Query: 425 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 484
++ + T ++G HFFSPA+VM LLE+VR + T+ V+ +M + K I+K VV G
Sbjct: 417 IDKIATFTGRPQDVVGMHFFSPANVMKLLEVVRGKATAKDVLATVMAIAKKIRKTAVVAG 476
Query: 485 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATS 544
C GF NR YS+ A L+ G ++D AI FG +GPF++ DLAG + A
Sbjct: 477 VCDGFIGNRMIEQYSRQAGFLLDEGCTPEQVDKAIEKFGFAMGPFRMGDLAGNDIGWAIR 536
Query: 545 KEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLP-IIEECRRL 603
K + + S D L + GR G+ G Y Y+ G + +++ +IEE R+
Sbjct: 537 KRRAVERAEMKY-SRTSDKLCELGRFGQKTAAGWYDYQAGKRDAIASALVHRMIEEHRQQ 595
Query: 604 SNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGG 663
I P + ++EIV+ ++F +VNE R+LE+GI ++ D+D + G FP +RGG
Sbjct: 596 LGI----TPRKIADEEIVQRLVFALVNEGARILEDGIASKSGDIDMVYITGYGFPMHRGG 651
Query: 664 IVFWADAVGANYVYTSLKKWSQLYGN---FFKPSRFLEERATKG 704
+ +A +G V ++ ++++ + F++P+ L A +G
Sbjct: 652 PMRYASELGLFNVVQAMGRFARNPHDDAAFWQPAPLLARLAAQG 695
>gi|319763962|ref|YP_004127899.1| 3-hydroxyacyl-CoA dehydrogenase [Alicycliphilus denitrificans BC]
gi|330823774|ref|YP_004387077.1| 3-hydroxybutyryl-CoA epimerase [Alicycliphilus denitrificans K601]
gi|317118523|gb|ADV01012.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Alicycliphilus
denitrificans BC]
gi|329309146|gb|AEB83561.1| 3-hydroxybutyryl-CoA epimerase [Alicycliphilus denitrificans K601]
Length = 702
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 262/701 (37%), Positives = 389/701 (55%), Gaps = 28/701 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+ G A+ITL NPPVNA+ + L E A + V +IV+ G G F GG D+ F
Sbjct: 9 HGGSAVITLSNPPVNAMGHAMRQELAAHLEAAWADPQVHSIVIIGAGKLFCGGADVKAFN 68
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ + S +V IE KP++AA+ G ALG GLE AMGCH R+A +L
Sbjct: 69 TP------ASRAEPSSRTIVKQIEASAKPVIAAIHGSALGLGLEFAMGCHYRVAQRGAKL 122
Query: 132 GLPEL---TLGVIPGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
GLPE+ L GTQRLPRL G+ A+ M++ S+T++E KLGL+D V ++ELL
Sbjct: 123 GLPEVKLGLLPGGGGTQRLPRLAGVEAALRMIVEGNSVTADEALKLGLVDEV-AAQELLP 181
Query: 189 VSRLWALDIAARRKPWIRSLHRTD---KLGSLSEAREVLKLARLQAKKTAPNMPQHQACL 245
+ +A ++AR + + S + + G R+ L K+ +P CL
Sbjct: 182 AALAFAARMSARSEHPVASRRQAQAPAEAGWFDAQRDKLH-------KSKRGLPAPLECL 234
Query: 246 DVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT-DIGLKPRG 304
+E + G+ E + F LV S+ L H+F A+RA +K+ + D + P
Sbjct: 235 ACVEAAVNLPFDEGMKFERERFDVLVNGTESKALRHLFLAERAAAKIAGLAADTPVIP-- 292
Query: 305 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 364
VR VAVIG G MG GIA + I V+L E E L +G+ TI N G V +GKL ++
Sbjct: 293 VRSVAVIGAGTMGGGIAMSFANAGIPVMLIEAAQEALDRGMATIAKNYDGTVAKGKLARE 352
Query: 365 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 424
+A+ L + L++ D D+VIEAV ES+ +K+++F +L+ C ILATNTS +D
Sbjct: 353 EADARLARITPTLEFERVADADLVIEAVFESMEVKKELFRKLDALCKADAILATNTSRLD 412
Query: 425 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 484
+N + T+ +IG HFFSPA+VM L+E+VR + T+ VI M V + I K+PV+VG
Sbjct: 413 VNEIAATTARPASVIGLHFFSPANVMRLVEVVRGQATAPSVIASSMAVSRQIGKLPVLVG 472
Query: 485 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATS 544
C GF NR Y++ A L+ G ++D+A++ FGL +G F + DLAG ++ A+
Sbjct: 473 VCDGFVGNRMVGQYAREAEFLLEEGASPQQVDAALQKFGLAMGRFAMSDLAGLDISWASR 532
Query: 545 KEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRL 603
K P S + D L + GR G+ G G Y YE GS+ P PDP V +IE+C R
Sbjct: 533 KRAAPTRPAHLRYSKVADRLCEMGRFGQKTGAGFYRYEAGSRTPIPDPIVQQVIEDCARE 592
Query: 604 SNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGG 663
+ I + + + +IVE ++ +VNE +VL+EGI R+SD+D V G FP++RGG
Sbjct: 593 AGI----ERRVIDDAQIVERCIYALVNEGAKVLQEGIAQRSSDIDLIYVNGYGFPAWRGG 648
Query: 664 IVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+F+AD VG + VY + + + +G F+ P+ L++ A +G
Sbjct: 649 PMFYADTVGVDKVYQRICDFHEKHGAFWTPAPLLKKLANEG 689
>gi|332141154|ref|YP_004426892.1| 3-hydroxyacyl-CoA dehydrogenase [Alteromonas macleodii str. 'Deep
ecotype']
gi|410861466|ref|YP_006976700.1| 3-hydroxyacyl-CoA dehydrogenase [Alteromonas macleodii AltDE1]
gi|327551176|gb|AEA97894.1| 3-hydroxyacyl-CoA dehydrogenase [Alteromonas macleodii str. 'Deep
ecotype']
gi|410818728|gb|AFV85345.1| 3-hydroxyacyl-CoA dehydrogenase [Alteromonas macleodii AltDE1]
Length = 708
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 261/709 (36%), Positives = 382/709 (53%), Gaps = 40/709 (5%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
GVA +T+ + PVNAL+ I GL + E A + VKAIV+T + FSGG DI+ F
Sbjct: 14 QQGVATLTMQSAPVNALSRAIRIGLIEGIESALNDASVKAIVVTSSLPIFSGGADISEFS 73
Query: 72 KVHGAGDVS-LMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQ 130
GD+S ++P+V ++ IE+ KP+VA + G A GGGLE+A+ CH RI +
Sbjct: 74 ----GGDLSPMLPEV-----LDKIENATKPVVAVLPGPAFGGGLEVALACHHRITFAGNK 124
Query: 131 LGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKL-GLIDAVVTS-EE 185
+GLPE+ LG++PG TQRLPRL + ++EM++ K + KL G+ D + E
Sbjct: 125 VGLPEVNLGILPGAGGTQRLPRLADVQTSLEMIVTGKPTSV---VKLPGVFDKISDKPEH 181
Query: 186 LLKVSRLW----ALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 241
LL+ ++ + D A +R I SL TD E + V Q KK
Sbjct: 182 LLEDTKAYLQGLTPDKAIKRTCDI-SLTMTD------ETKGVFDAVTAQTKKATRGFFAP 234
Query: 242 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 301
C++ + G+ E K+F E + +R H FFA+RA V + D
Sbjct: 235 LKCIEAVRGAYTLAFDDGLKNEGKLFMECMNTPQARAQQHFFFAERAAGHVSDF-DKNTP 293
Query: 302 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 361
R + KVA+IG G MG GIA I V + E+ E L KG+ I N +GKL
Sbjct: 294 ERSIEKVAIIGAGTMGGGIAMNFANAGIPVTMLELKEEALEKGLALIRKNYENSAKKGKL 353
Query: 362 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 421
TQ++ + + +L G Y + DVD+VIEAV E + +K+ +FS L+K C P ILA+NTS
Sbjct: 354 TQEQVESRMALLSGTTSYDDLSDVDLVIEAVFEKMEVKKTVFSTLDKVCKPGAILASNTS 413
Query: 422 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 481
T+D++ + TS + +IG HFFSPA+VM LLE+V+ E+TSA+VI M + K I+KV V
Sbjct: 414 TLDIDEIATATSRPENVIGLHFFSPANVMKLLEVVKAEKTSAEVIKTCMKMAKRIRKVAV 473
Query: 482 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAA 541
+VG C GF NR PY + A L+ G ++D + FG+P+GPF + D+AG +
Sbjct: 474 LVGVCFGFVGNRMIEPYGREANRLLLEGATPEQVDRVLTEFGMPMGPFTMGDMAGLDIGY 533
Query: 542 ATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPII-EE 599
+ + + D L++ GRNG G+G Y YE GS+ P PDP VL I +E
Sbjct: 534 YVRQSRQEHISHDPAYGAVADRLVEKGRNGLKTGRGAYNYEPGSRVPIPDPEVLEIAKQE 593
Query: 600 CRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPS 659
RL + ++++EI+ +++ ++NE +LEEGI ++SD+D V G FP
Sbjct: 594 AERLGV----QQRSDISDEEILVRVMYSLINEGAAILEEGIAAKSSDIDVIYVYGYGFPV 649
Query: 660 YRGGIVFWADAVGANYVYTSLKKWSQLYGNFFK----PSRFLEERATKG 704
YRGG + +AD VG + L + G + K PS L + A +G
Sbjct: 650 YRGGPMQYADEVGLGTILDKLTTYRDQLGEYGKMWLEPSDLLVKLAQEG 698
>gi|120611544|ref|YP_971222.1| 3-hydroxyacyl-CoA dehydrogenase [Acidovorax citrulli AAC00-1]
gi|120590008|gb|ABM33448.1| 3-hydroxyacyl-CoA dehydrogenase [Acidovorax citrulli AAC00-1]
Length = 699
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 262/682 (38%), Positives = 374/682 (54%), Gaps = 30/682 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA+ITL NPPVN L G+ D A + VKAIV+TG GG FSGG DI F
Sbjct: 11 VAVITLANPPVNGLGHATRKGITDGLARANADAAVKAIVVTGAGGAFSGGADIKEF---- 66
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G M + ++ V+ +E KP+VAA+ + +GGGLELA+GCH RIAAP + LP
Sbjct: 67 --GTDKAMQEPNLHSVIRAVEGSAKPVVAAIHTVCMGGGLELALGCHYRIAAPGCSMALP 124
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSE-----EGWKLGLIDAVVTSEEL 186
E+ LG++PG TQRLPR+VG+ A+ M++ + + SE G KL D + S E
Sbjct: 125 EVKLGLLPGAGGTQRLPRVVGVEAALNMIVSGEPVKSELIGGMPGQKL--FDRMAASAES 182
Query: 187 LKVSRL-WALDIAARRK-PWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 244
L L +A +A R P +R+L G + AR K A N P C
Sbjct: 183 LAEEALAFARSVADTRPLPLVRNLPAKHPQGD-----AYFQFARNMVKGMAKNFPAPLKC 237
Query: 245 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRG 304
+D +E G+ E ++F L+ SR L H+F A+RA SK+P+V K R
Sbjct: 238 VDAVEAATKRKFEDGLAYERELFVNLMWTPESRALRHLFLAERAASKIPDVPSDTPK-RE 296
Query: 305 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 364
+RKV VIG G MG GI+ + I V + E E L +G+ TI N V + KL QD
Sbjct: 297 IRKVGVIGAGTMGGGISMNFLNAGIPVTILETKQEALDRGLATIRKNYEAQVAKSKLKQD 356
Query: 365 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 424
K + +L L+Y + KDVD+VIEAV E + +K+ +F +L++ P ILA+NTST+D
Sbjct: 357 KYEQRMALLTPTLNYDDLKDVDLVIEAVFEEMGVKETVFRKLDEVAKPGAILASNTSTLD 416
Query: 425 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 484
+N + T ++G HFFSPA+VM LLE+VR ++T+ V+ +M + K IKK VV G
Sbjct: 417 VNRIAAFTKRPQDVVGMHFFSPANVMKLLEVVRGKQTAKDVLATVMALAKKIKKTAVVSG 476
Query: 485 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATS 544
C GF NR YSQ A L+ G ++D AI FG +GPF++ DLAG + A
Sbjct: 477 VCDGFIGNRMIERYSQQAGFLLDEGATPQQVDKAIEKFGFAMGPFRMGDLAGNDIGWAIR 536
Query: 545 KEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVLPIIEECRRL 603
K PD + S D L + GR G+ G G Y Y+ G + P V +IE+ R+
Sbjct: 537 KRRAVERPDMKY-SRTADKLCELGRYGQKTGAGWYDYKPGKRDAIPSELVNKMIEDHRKE 595
Query: 604 SNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGG 663
I P ++++EIV+ +++ +VNE ++LEEGI ++ D+D + G FP +RGG
Sbjct: 596 LGITPR----KISDEEIVQRLVYALVNEGAKILEEGIASKSGDIDMVYLTGYGFPIHRGG 651
Query: 664 IVFWADAVGANYVYTSLKKWSQ 685
+ +A VG V S+++++Q
Sbjct: 652 PMHYASEVGLFNVAQSMQRFAQ 673
>gi|326318994|ref|YP_004236666.1| 3-hydroxybutyryl-CoA epimerase [Acidovorax avenae subsp. avenae
ATCC 19860]
gi|323375830|gb|ADX48099.1| 3-hydroxybutyryl-CoA epimerase [Acidovorax avenae subsp. avenae
ATCC 19860]
Length = 710
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 243/696 (34%), Positives = 367/696 (52%), Gaps = 24/696 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
V ++ + NPPVNAL + GL EA SR DV+A+++ G G F G DI F K
Sbjct: 19 VLVVRIDNPPVNALGAAVRQGLMAAIGEAESRADVQAVLIVGEGKAFIAGADIREFGK-- 76
Query: 75 GAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
P V L V IE C K +VAA+ G ALGGGLE+A+ H R+A P QLG
Sbjct: 77 --------PPVEPSLPEVCQRIESCGKRVVAAIHGAALGGGLEVALAAHYRVALPGAQLG 128
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 189
LPE+ LG++PG TQR PRL+G+ A EMML K ++++ GL+D +V + +
Sbjct: 129 LPEVNLGLLPGAGGTQRAPRLMGVKPAAEMMLSGKPLSAKAALAAGLVDRLVDGSDPVAA 188
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
++ + + P +R + E+ LA AKK+ + Q ++ +
Sbjct: 189 GLACVQELQSAQAP-LRRTRDVAIADKAAAMAELDALAADTAKKSR-GLFSPQKIVECVR 246
Query: 250 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 309
+ G+ +E F E + GL+H FFA+R +KVP PR + +A
Sbjct: 247 NAVELDFDEGMQRERAAFMECLASPQRAGLIHAFFAEREVAKVPEAK--AAAPRPITSIA 304
Query: 310 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 369
+IGGG MG+GI + + + V + E + L +G +E GLV +G++T D
Sbjct: 305 IIGGGTMGAGITVSALDAGLPVTMIERDDASLARGRAHVEKVYDGLVAKGRMTADAKAAV 364
Query: 370 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 429
+ G Y + D+VIEAV E + +K+ +F EL++ C P +LATNTS +D++ +
Sbjct: 365 MARYTGSTRYEDIAAADLVIEAVFEDLEVKKAVFRELDRVCKPGAVLATNTSYLDIDAIA 424
Query: 430 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 489
T +IG HFFSPA++M LLEIV + SA V+ + + +KKVPV G C GF
Sbjct: 425 AATQRPQDVIGLHFFSPANIMKLLEIVVPAKVSADVVATAFALARTMKKVPVRAGVCDGF 484
Query: 490 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDK 549
NR Y Q+A L+ G + ID+A+R FG P+GPFQ+ DLAG + AT K
Sbjct: 485 IGNRILAVYKQAADYLMEDGASPYEIDAAVRGFGYPMGPFQVTDLAGGDIGWATRKRRAA 544
Query: 550 AFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKP-KPDPSVLPIIEECRRLSNIMP 608
+ + D + + G G+ G+G Y Y +G++ +PDP VL I++ R ++
Sbjct: 545 TRDPNARYVEIADRICERGWFGQKTGRGFYLYPEGARTGQPDPEVLAIVDAERAKKGVV- 603
Query: 609 GGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWA 668
P S T EI+ + +VNE +V+EEGI +R D+D + G FP +RGG + +A
Sbjct: 604 ---PRSFTPHEIMRRYMAAMVNEGAKVVEEGIALRPLDVDVTFLSGYGFPRFRGGPMHYA 660
Query: 669 DAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
D VG + +++++Q F+KP+ LE+ +G
Sbjct: 661 DTVGLPKILADIREFAQEDPLFWKPAPLLEKLVAEG 696
>gi|374369155|ref|ZP_09627192.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Cupriavidus basilensis
OR16]
gi|373099305|gb|EHP40389.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Cupriavidus basilensis
OR16]
Length = 693
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 259/700 (37%), Positives = 381/700 (54%), Gaps = 26/700 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DGVA+ITL NPPVN L + G+ + A VKAIV+TG G FSGG DI F
Sbjct: 8 QDGVAVITLDNPPVNGLGLSTRLGIVEGMTRALDDAAVKAIVITGAGKAFSGGADIREFN 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ +L V+ ++E KP+VAA+ +A+GGGLELA+GC+ R+A+ Q+
Sbjct: 68 TPKATQEPTLHS------VIKVVEGSGKPVVAAIHSVAMGGGLELALGCNYRVASKGAQI 121
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
LPE+ LG++PG TQRLPR++GL A+ M++ +I SE+ L D +V + +L
Sbjct: 122 ALPEVKLGLLPGAGGTQRLPRVIGLEAALNMIVSGNAIPSEKFAGTKLFDEIVDGD-VLP 180
Query: 189 VSRLWALDIAARRKPW--IRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLD 246
+ +A AA P+ +R L + A + +R A N P C+D
Sbjct: 181 AAVAFAKTAAANPGPYPKVRDLKVKHE-----NAEGFIAFSRNTVAAVAKNFPAPLKCVD 235
Query: 247 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 306
+ + +G+ E + F L+ SR L H FF +RA SK+P+V + G R +
Sbjct: 236 AVAASL-KPFEAGLKAEREGFMYLITTPESRALRHAFFGERAASKIPDVPE-GTPTRKLE 293
Query: 307 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 366
K+AVIG G MG GI + I V++ E E L +G+ TI N +GKLTQ+K
Sbjct: 294 KIAVIGAGTMGGGITMNFLNAGIPVIMLETKQEALDRGVATIRKNYENSAKKGKLTQEKV 353
Query: 367 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 426
+ +L L Y E KD DMVIEAV E + +K+ +F +L++ ILA+NTST+D+N
Sbjct: 354 EQRMGLLTTTLSYDEIKDADMVIEAVFEEMGVKEIVFKKLDEVMKQGAILASNTSTLDVN 413
Query: 427 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 486
+ T ++G HFFSPA+VM LLE+VR E+T V+ +M V K IKK VV G C
Sbjct: 414 KIASFTKRPQDVVGMHFFSPANVMKLLEVVRGEKTGKDVLATVMQVAKKIKKTAVVSGVC 473
Query: 487 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKE 546
GF NR YS+ A L+ G ++D A+ FG +GPF++ DLAG + A K
Sbjct: 474 DGFIGNRMIEQYSRQAGYLLDEGALPEQVDKAVEKFGFAMGPFRMGDLAGNDIGWAIRKR 533
Query: 547 FDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGS-KPKPDPSVLPIIEECRRLSN 605
P+ + S DLL + GR G+ G G Y Y+ G K P+ V +I + +
Sbjct: 534 RAIDKPEIQY-SKTADLLCELGRYGQKTGAGWYDYKAGDRKAYPNQQVNDMIVQHSKDLG 592
Query: 606 IMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIV 665
I ++++EIVE ++F +VNE ++LEEGI +ASD+D + G FP +RGG +
Sbjct: 593 IT----RRKISDEEIVERLVFALVNEGAKILEEGIASKASDIDMVYLTGYGFPLFRGGPM 648
Query: 666 FWADAVGANYVYTSLKKWSQLY-GNFFKPSRFLEERATKG 704
+AD VG V S+ ++++ Y G ++ + L + A +G
Sbjct: 649 LYADQVGLFNVAQSMARYAKGYHGEAWQAAPLLVKLAAEG 688
>gi|443468142|ref|ZP_21058378.1| Enoyl-CoA hydratase [Pseudomonas pseudoalcaligenes KF707]
gi|442897219|gb|ELS24207.1| Enoyl-CoA hydratase [Pseudomonas pseudoalcaligenes KF707]
Length = 703
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 261/709 (36%), Positives = 388/709 (54%), Gaps = 38/709 (5%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DG+A+I L PPVNAL P+ A + D E A + V+AI+L G G F G DI F
Sbjct: 10 EDGLALIGLARPPVNALGQPLRAAILDACERAAADASVQAIILHGAHGLFCAGADIGEF- 68
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
G+ PD+ L++ L KP++AA+ LALGGGLELA+ C RI+ P +L
Sbjct: 69 ---GSEASFAAPDLP-NLLLRLTA-LDKPLIAAIGTLALGGGLELALACGYRISEPDARL 123
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEE-LL 187
GLPE+ LG++PG TQRLPRL+G+ A++MM+ + I + ++LGL+D + + +E LL
Sbjct: 124 GLPEINLGLLPGAGGTQRLPRLIGVEPALDMMISGQPIGAGRAFELGLLDRLASGKESLL 183
Query: 188 KVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQA-------KKTAPNMPQ 240
+R +A ++ +R P RT + + +E+ L++ +A + AP +
Sbjct: 184 DDARAFARELLDQRAPA----QRTSRFANPAESVAADFLSQFRAANEPRWKSRLAPRL-- 237
Query: 241 HQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIG 299
L +E G+++E ++FKE S L HVFFA+R ++P + DI
Sbjct: 238 ---VLAAVEAACNLPLAEGLVREHELFKEAEASKQSAALRHVFFAEREAGRIPGIEADIP 294
Query: 300 LKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRG 359
L R + KVAVIG G MG GIA + I V L E E L G+ I N V RG
Sbjct: 295 L--RRIEKVAVIGAGTMGGGIAMNFVNAGIPVALLEQKGEALDCGLANIRKNYEISVKRG 352
Query: 360 KLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATN 419
KLT + +++L G LDY++ D D+VIEAV E + +KQ++F EL++ C P ILA+N
Sbjct: 353 KLTAAQLEQRMELLFGTLDYADLADADLVIEAVFEKLEIKQQVFRELDRLCKPGAILASN 412
Query: 420 TSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKV 479
TS++D++++ TS +IG HFFSPA+VM LLE+VR + T+ V+ M + K I K+
Sbjct: 413 TSSLDVDVIAASTSRPQDVIGLHFFSPANVMRLLEVVRGKATAPDVLATTMKIAKRIGKL 472
Query: 480 PVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGV 539
PV+ G C GF NR PYS+ A LV G ++D + L +G F +LDLAG V
Sbjct: 473 PVISGVCFGFIGNRMLEPYSREAHRLVLEGATPTQVDKVLTDLDLNMGVFSMLDLAGIDV 532
Query: 540 AAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEE 599
AF L D L GR+G+ G+G Y YE G + D V+ + E
Sbjct: 533 NFLVRNSNRAAFAHDESYCRLGDELYAQGRHGQKTGRGFYLYE-GRNRQEDYEVVALAE- 590
Query: 600 CRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPS 659
R + +P V ++EI + LF ++NE ++L+EGI +RASD+D + G FP+
Sbjct: 591 -RLAGELHVPRRP--VGDQEIHDRCLFMLINEGIQLLDEGIALRASDIDLVWINGYGFPA 647
Query: 660 YRGGIVFWADAVGANYVYTSLKKWSQLYGNF----FKPSRFLEERATKG 704
+ GG + +A+ +G + V ++ + + G + FKP+ LE G
Sbjct: 648 HLGGPLHYAEQLGLDKVLAGIQHYRRTLGGYGEMWFKPAALLERLVAAG 696
>gi|326317169|ref|YP_004234841.1| 3-hydroxybutyryl-CoA epimerase [Acidovorax avenae subsp. avenae
ATCC 19860]
gi|323374005|gb|ADX46274.1| 3-hydroxybutyryl-CoA epimerase [Acidovorax avenae subsp. avenae
ATCC 19860]
Length = 699
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 262/682 (38%), Positives = 374/682 (54%), Gaps = 30/682 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA+ITL NPPVN L G+ D A + VKAIV+TG GG FSGG DI F
Sbjct: 11 VAVITLANPPVNGLGHATRKGITDGLARANADAAVKAIVVTGAGGAFSGGADIKEF---- 66
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G M + ++ V+ +E KP+VAA+ + +GGGLELA+GCH RIAAP + LP
Sbjct: 67 --GTDKAMQEPNLHSVIRAVEGSAKPVVAAIHTVCMGGGLELALGCHYRIAAPGCSMALP 124
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSE-----EGWKLGLIDAVVTSEEL 186
E+ LG++PG TQRLPR+VG+ A+ M++ + + SE G KL D + S E
Sbjct: 125 EVKLGLLPGAGGTQRLPRVVGVEAALNMIVSGEPVKSELIGGMPGQKL--FDKMAASAES 182
Query: 187 LKVSRL-WALDIAARRK-PWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 244
L L +A +A R P +R+L G + AR K A N P C
Sbjct: 183 LAEEALAFARSVADTRPLPLVRNLPARHPQGD-----AYFQFARNMVKGMAKNFPAPLKC 237
Query: 245 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRG 304
+D +E G+ E ++F L+ SR L H+F A+RA SK+P+V K R
Sbjct: 238 VDAVEAATKRKFEDGLAYERELFVNLMWTPESRALRHLFLAERAASKIPDVPSDTPK-RE 296
Query: 305 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 364
+RKV VIG G MG GI+ + I V + E E L +G+ TI N V +GKL QD
Sbjct: 297 IRKVGVIGAGTMGGGISMNFLNAGIPVTILETKQEALDRGLATIRKNYEAQVAKGKLKQD 356
Query: 365 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 424
K + +L L Y + KDVD+VIEAV E + +K+ +F +L++ P ILA+NTST+D
Sbjct: 357 KYEQRMALLTPTLSYDDLKDVDLVIEAVFEEMGVKETVFKKLDEVARPGAILASNTSTLD 416
Query: 425 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 484
++ + T ++G HFFSPA+VM LLE+VR ++T+ V+ +M + K IKK VV G
Sbjct: 417 VDQIAAFTKRPQDVVGMHFFSPANVMKLLEVVRGKQTAKDVLATVMALAKKIKKTAVVSG 476
Query: 485 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATS 544
C GF NR YSQ A L+ G ++D AI FG +GPF++ DLAG + A
Sbjct: 477 VCDGFIGNRMIERYSQQAGFLLDEGATPQQVDKAIEKFGFAMGPFRMGDLAGNDIGWAIR 536
Query: 545 KEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVLPIIEECRRL 603
K PD + S D L + GR G+ G G Y Y+ G + P V +IE+ R+
Sbjct: 537 KRRAVERPDMKY-SRTADKLCELGRYGQKTGAGWYDYKPGKRDAIPSDLVNKMIEDHRKE 595
Query: 604 SNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGG 663
I P ++++EIV+ +++ +VNE ++LEEGI ++ D+D + G FP +RGG
Sbjct: 596 LGITPR----KISDEEIVQRLVYALVNEGAKILEEGIASKSGDIDMVYLTGYGFPIHRGG 651
Query: 664 IVFWADAVGANYVYTSLKKWSQ 685
+ +A VG V S+++++Q
Sbjct: 652 PMHYASEVGLFNVEQSMQRFAQ 673
>gi|120612950|ref|YP_972628.1| 3-hydroxyacyl-CoA dehydrogenase [Acidovorax citrulli AAC00-1]
gi|120591414|gb|ABM34854.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein [Acidovorax
citrulli AAC00-1]
Length = 710
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 244/699 (34%), Positives = 366/699 (52%), Gaps = 24/699 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DGV ++ + NPPVNAL + GL+D EA SR DV+A+++ G G F G DI F
Sbjct: 16 QDGVLVVRIDNPPVNALGAAVRRGLRDAIGEAESRADVQAVLIVGEGKAFIAGADIREFG 75
Query: 72 KVHGAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKT 129
K P V L V IE C K +VAA+ G ALGGGLE+A+ H R+A P
Sbjct: 76 K----------PPVEPSLPEVCQRIESCAKRVVAAIHGAALGGGLEVALAAHYRVALPAA 125
Query: 130 QLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL 186
QLGLPE+ LG++PG TQR PRL+G+ A EMML K + + GL+D +V +
Sbjct: 126 QLGLPEVNLGLLPGAGGTQRAPRLMGVKPAAEMMLSGKPLNARAALAAGLVDRLVDGSDP 185
Query: 187 LKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLD 246
+ ++ A + P R+ R + + A L + + + ++
Sbjct: 186 VAAGLACVRELQAAQAPLRRT--RDVAIADRAAALADLDALAADTARKSRGLFSPLKIVE 243
Query: 247 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 306
+ + G+ +E F E + GL+H FFA+R +KVP PR V
Sbjct: 244 CVRNAVELPFDEGMQRERAAFMECLASPQRAGLIHAFFAEREVAKVPEAK--AAAPRPVA 301
Query: 307 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 366
+AVIGGG MG+GI + + + V + E + L +G +E GL+ +G++T D
Sbjct: 302 SIAVIGGGTMGAGITVSALDAGLPVTMIERDDASLARGRAHVEKVYDGLIAKGRMTADAK 361
Query: 367 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 426
+ G Y + D+VIEAV E + +K+ +F EL++ C P +LATNTS +D++
Sbjct: 362 AAVMARYTGSTRYEDIAAADLVIEAVFEDLEVKKAVFRELDRVCKPGAVLATNTSYLDID 421
Query: 427 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 486
+ T +IG HFFSPA++M LLEIV + A V+ + K +KKVPV G C
Sbjct: 422 AIAAATGRPRDVIGLHFFSPANIMKLLEIVVPAKVGADVVATAFALAKQLKKVPVRAGVC 481
Query: 487 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKE 546
GF NR Y Q+A L+ G + ID+A+R FG P+GPFQ+ DLAG + AT K
Sbjct: 482 DGFIGNRILAVYKQAADYLMEDGASPYEIDAAVRGFGYPMGPFQVTDLAGGDIGWATRKR 541
Query: 547 FDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKP-KPDPSVLPIIEECRRLSN 605
++ + D + + G G+ G+G Y Y +G++ +PDP VL I++ R
Sbjct: 542 RAATRDPKARYVEIADRICERGWFGQKTGRGFYLYPEGARTGQPDPEVLAIVDAERAKKG 601
Query: 606 IMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIV 665
++ P S T EI+ + +VNE +V+EEGI +R D+D + G FP +RGG +
Sbjct: 602 VV----PRSFTPHEIMRRYMAAMVNEGAKVVEEGIALRPLDVDVTFLSGYGFPRFRGGPM 657
Query: 666 FWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+AD VG + +++++Q F+KP+ LE+ +G
Sbjct: 658 HYADTVGLPKLLADIREFAQEDPLFWKPAPLLEKLVAEG 696
>gi|407683514|ref|YP_006798688.1| 3-hydroxyacyl-CoA dehydrogenase [Alteromonas macleodii str.
'English Channel 673']
gi|407245125|gb|AFT74311.1| 3-hydroxyacyl-CoA dehydrogenase [Alteromonas macleodii str.
'English Channel 673']
Length = 707
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 261/707 (36%), Positives = 381/707 (53%), Gaps = 40/707 (5%)
Query: 14 GVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKV 73
GVA +T+ + PVNAL+ I L + A D V AIV+T + FSGG DI+ F
Sbjct: 16 GVATLTMQSAPVNALSRAIRVWLIEGINNALDDDSVSAIVITSSLPIFSGGADISEFS-- 73
Query: 74 HGAGDVS-LMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
GD+S ++P+V ++ IE+ KP+VA + G A GGGLE+A+ CH RI ++G
Sbjct: 74 --GGDLSPMLPEV-----LDKIENASKPVVAVLPGPAFGGGLEVALACHHRITFADNKVG 126
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKL-GLIDAVVTS-EELL 187
LPE+ LG++PG TQRLPRL + ++EM++ K + KL G+ D + E LL
Sbjct: 127 LPEVNLGILPGAGGTQRLPRLADVQTSLEMIVTGKPTSV---VKLPGVFDKISDKPEHLL 183
Query: 188 KVSR--LWAL--DIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQA 243
+ ++ L AL D A +R I +L +D E + V Q KK
Sbjct: 184 EDTKAYLQALTPDKAIKRTSDI-TLSMSD------ETQAVFDAVTAQTKKATRGFFAPLK 236
Query: 244 CLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPR 303
C++ + G+ E K+F E + +R H FFA+RA V + D R
Sbjct: 237 CIEAVRGAYTLAFEDGLKNEGKLFMECMNTPQARAQQHFFFAERAAGHVSDF-DKNTPER 295
Query: 304 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQ 363
+ KVA+IG G MG GIA I V + E+ E L KG+ I N +GKLTQ
Sbjct: 296 NIDKVAIIGAGTMGGGIAMNFANAGIPVTMLELKEEALEKGLALIRKNYENSAKKGKLTQ 355
Query: 364 DKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI 423
++ + + +L G Y + DVD+VIEAV E + +K+ +FS L+K C P ILA+NTST+
Sbjct: 356 EQVESRMALLSGTTSYDDLADVDLVIEAVFEKMEVKKTVFSTLDKVCKPGAILASNTSTL 415
Query: 424 DLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVV 483
D++ + TS + +IG HFFSPA+VM LLE+V+ E+TSA+VI M + K IKKV V+V
Sbjct: 416 DIDEIATATSRPEDVIGLHFFSPANVMRLLEVVKAEKTSAEVIKTCMKMAKRIKKVAVLV 475
Query: 484 GNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAAT 543
G C GF NR PY + A L+ G ++D + FG+P+GPF + D+AG +
Sbjct: 476 GVCFGFVGNRMIEPYGREANRLLLEGATPEQVDRVLTEFGMPMGPFTMGDMAGLDIGYYV 535
Query: 544 SKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPII-EECR 601
+ + + D L++ GRNG G+G Y YE GS+ P PDP VL I +E
Sbjct: 536 RQSRQEHIAHDPAYGAVADRLVEKGRNGLKTGRGAYNYEPGSRVPVPDPEVLEIAKQEAE 595
Query: 602 RLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYR 661
RL + ++++EI+ +++ ++NE +LEEGI ++SD+D V G FP YR
Sbjct: 596 RLGVVQRS----DISDEEILVRVMYSLINEGAAILEEGIAAKSSDIDVIYVYGYGFPVYR 651
Query: 662 GGIVFWADAVGANYVYTSLKKWSQLYGNFFK----PSRFLEERATKG 704
GG + +AD VG + L + G++ K PS L + A G
Sbjct: 652 GGPMQYADEVGLGTILDKLTTYRDQLGDYGKMWLEPSDLLVKLAQSG 698
>gi|241763901|ref|ZP_04761944.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Acidovorax delafieldii
2AN]
gi|241366796|gb|EER61228.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Acidovorax delafieldii
2AN]
Length = 699
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 265/704 (37%), Positives = 384/704 (54%), Gaps = 33/704 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA+ITL NPPVN L + G+ D A V +IV+TG GG FSGG DI F
Sbjct: 11 VAVITLANPPVNGLGLSTRQGIVDGLTRANDDAAVTSIVITGAGGAFSGGADIKEF---- 66
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G + + ++ V+ +E+ KP+VAA+ + +GGGLELA+GCH RIAAP + LP
Sbjct: 67 --GTDKSLQEPNLHSVIAAVENSAKPVVAAIHSVCMGGGLELALGCHYRIAAPGCSVALP 124
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSE-----EGWKLGLIDAVVTSEEL 186
E+ LG++PG TQRLPR+VG+ A+ M++ + + SE G KL D + S E
Sbjct: 125 EVKLGILPGAGGTQRLPRVVGVEAALNMIVSGEPVKSELIGSIPGQKL--FDKMAASPEA 182
Query: 187 LKVSRLWALDIAA--RRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 244
L L A R P +R+L G + AR K + N P C
Sbjct: 183 LAAEALAFAQSVADVRPMPLVRNLPCKHPQGD-----AYFQFARNMVKGMSKNFPAPAKC 237
Query: 245 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRG 304
+D +E G+L E ++F L+ SR L H+F A+RA SK+P+V K R
Sbjct: 238 VDAVEAATKKKFADGLLFERELFINLMWTPESRSLRHLFLAERAASKIPDVPADTPK-RD 296
Query: 305 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 364
++ VAVIG G MG GIA + I V + E+ E L +GI TI+ N V +GKL QD
Sbjct: 297 IKAVAVIGAGTMGGGIAMNFLNAGIPVKMLEMKQEALDRGIATIKKNYEAQVKKGKLKQD 356
Query: 365 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 424
K + +L LDY++ KD D+VIEAV E + +K+ +F +L+ P ILA+NTST+D
Sbjct: 357 KYEQRMALLSTTLDYADLKDADLVIEAVFEELGVKEAVFKQLDAVMKPGAILASNTSTLD 416
Query: 425 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 484
+N + T ++G HFFSPA+VM LLE+VR + T+ V+ +M V K I+K VV G
Sbjct: 417 VNKIAHFTQRPQDVVGLHFFSPANVMKLLEVVRGDATAKDVLATVMAVAKKIRKTAVVSG 476
Query: 485 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATS 544
C GF NR Y + L+ G ++D A+ FG+ +GPF++ DLAG + A
Sbjct: 477 VCDGFIGNRMIEQYGRQGGFLLDEGCTPEQVDKAMEKFGMAMGPFRMGDLAGNDIGWAIR 536
Query: 545 KEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVLPIIEECRRL 603
K PD + S DLL + GR G+ G G Y Y G + P+ V+ +IE+ R
Sbjct: 537 KRRYTEKPDMKY-SKTADLLCEKGRFGQKTGAGWYDYVPGKRDAIPNAEVVKMIEDHRAS 595
Query: 604 SNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGG 663
I P ++++EIV+ ++F +VNE+ +LEEGI +ASD+D + G FP YRGG
Sbjct: 596 LGITPR----KISDEEIVQRLVFSLVNEAAHILEEGIANKASDIDVVYIFGYGFPVYRGG 651
Query: 664 IVFWADAVGANYVYTSLKKWSQL---YGNFFKPSRFLEERATKG 704
+ +A+ VG V ++ ++++ F+KP+ L + A +G
Sbjct: 652 PLNYANEVGLFNVVQAMNRFAKNPLDDAAFWKPAPLLAKLAAEG 695
>gi|312115608|ref|YP_004013204.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase protein [Rhodomicrobium
vannielii ATCC 17100]
gi|311220737|gb|ADP72105.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Rhodomicrobium
vannielii ATCC 17100]
Length = 695
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 249/714 (34%), Positives = 384/714 (53%), Gaps = 31/714 (4%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR 60
MA VT E DGV +IT+ NPP+N ++ + GL +A + KA+VL G G
Sbjct: 1 MARSPVTYET-KDGVGVITVDNPPLNVVSNEVRDGLMLAIRKAEADPVAKAVVLIGAGRN 59
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
F+ G DI + D++ D+ L ED KP+VAA+ G + GLE+A+ C
Sbjct: 60 FAAGADIYELTHPYSGADIN---DICAAL-----EDLPKPVVAALHGTPVARGLEVALAC 111
Query: 121 HARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 177
H RIAA +LGLPE+ +G++PG TQRLPRLVG A+++++ + + + +GL+
Sbjct: 112 HYRIAAKDARLGLPEVKVGLLPGGGGTQRLPRLVGAKAALDIIISGDLVPAVKAKTIGLV 171
Query: 178 DAVVTSEELLKVSRLWALDIAARRKPWIRSLHRT---DKLGSLSEAREVLKLARLQAKKT 234
D VV + L L + P R L D+ L E R R + ++
Sbjct: 172 DEVVDGDILPAAIALAKSKSFLSKHPKTRELSAKIAPDRGSHLFEGR------RDELRRR 225
Query: 235 APNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPN 294
P C+D IE + G+ +E ++F E + D S+ L+H FFA+R +K+P
Sbjct: 226 QPFQHAQFRCVDAIESAVHLPFSQGLKRERELFNEALDDDQSKALIHAFFAEREAAKIPG 285
Query: 295 V-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVR 353
TD+ +PR ++ VAV+G G MG GIA A V++ + + L +G+ + N
Sbjct: 286 FRTDV--RPREIKSVAVVGSGHMGGGIAMAFANAGFPVIVLDRDQAALSRGLAVVAKNYE 343
Query: 354 GLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPH 413
+V RG+L Q N L ++ ++Y + DVD+V+EA E + +K+++F +L++AC
Sbjct: 344 SMVRRGRLDQPGMNKRLSAIRSTVNYKDLADVDLVVEAAFEDIGVKEQVFRDLDRACKKG 403
Query: 414 CILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVG 473
I A+NTST+D++ + T +IG HFFSPA+V L+E+VR + TSA V+ M V
Sbjct: 404 AIFASNTSTLDIDEIASFTRRPGDVIGTHFFSPANVQRLVEVVRGKETSADVLATAMAVA 463
Query: 474 KIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLD 533
K I K+ V VGNC GFA NR Y A +++ G +D+A+ +GL +GPF + D
Sbjct: 464 KKIGKIGVAVGNCDGFAGNRMLEKYVTEAMIILEEGATPAEVDTALTRWGLAMGPFAVFD 523
Query: 534 LAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPS 592
L G V + K + + S L+D +GR G+ GKG Y YE GS+ P PDP
Sbjct: 524 LTGIDVNWHIRQRRLKQ--GKPYGSALLDRFYDAGRFGQKTGKGFYRYETGSRAPLPDPE 581
Query: 593 VLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASV 652
IIE RR G + SV+E+EIV+ ++ +VNE +L+EG+V R+ D+D +
Sbjct: 582 ADAIIEAYRREV----GPRVKSVSEQEIVKRTIYALVNEGANILDEGVVYRSGDIDTIYI 637
Query: 653 LGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIP 706
G FP++RGG + +A+ G V + L + +G+ ++P+ L+ T P
Sbjct: 638 NGYGFPAWRGGPMKYAELRGLAEVLSDLDIFHMRFGDRWRPAALLKSLVTARKP 691
>gi|254503279|ref|ZP_05115430.1| 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain family
[Labrenzia alexandrii DFL-11]
gi|222439350|gb|EEE46029.1| 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain family
[Labrenzia alexandrii DFL-11]
Length = 696
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 255/700 (36%), Positives = 390/700 (55%), Gaps = 29/700 (4%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D +A+I + NPPVNAL+ + +GL+D F D +KAIV+ G G F G DI F
Sbjct: 11 EDNIAVIEIANPPVNALSHAVRSGLQDAFRGIAENDAIKAIVVYGAGRTFVAGADIREFG 70
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ +P++ +N IE C +P++A+V G LGGGLELA+G H RIAAPKT+L
Sbjct: 71 QPPKE---PFLPEL-----INEIESCTRPVIASVHGTVLGGGLELALGAHYRIAAPKTKL 122
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
GLPE++LG++PG TQRLPRLV ++KAI+M+ K +++ E +LGLID + +++
Sbjct: 123 GLPEVSLGLLPGAGGTQRLPRLVPVTKAIDMITSGKPVSANEALELGLIDQISGEDDMRA 182
Query: 189 VSRLWA---LDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACL 245
+A + A +P T + G +AR L K A Q C+
Sbjct: 183 AGLAYAKALVKQGAGPRPVSGLPCNTPEDGLFDKARATLA-------KKARGQLASQKCI 235
Query: 246 DVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGV 305
D IE + G+ +E +F+ L+ D L+H FF++R K+P + D+ +PR +
Sbjct: 236 DAIEGAVNLPFAEGLAQERALFRALMDSDQRAALIHAFFSERQVGKLPEIKDV--EPRIL 293
Query: 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDK 365
V +IGGG MGSGIAT+ +L + V L E ++E + K T+ N+ G V RGKL+Q+K
Sbjct: 294 ENVGIIGGGTMGSGIATSALLAGLTVTLIERDAEAVAKAEGTVSKNLAGAVKRGKLSQEK 353
Query: 366 ANNALK-MLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 424
+ + K DY + D+VIEAV ES+ +K+++F +L+K C P +LA+NTS +D
Sbjct: 354 FDAIMAGHFKAGSDYDALAEADLVIEAVFESMDVKKEVFGKLDKICKPGAVLASNTSYLD 413
Query: 425 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 484
++ + E TS +IG HFFSPAHVM LLEIV +T+ V+ + K + K+ V G
Sbjct: 414 VDEIAEITSRPADVIGLHFFSPAHVMRLLEIVVGAKTAPDVVATGFALAKRLGKIGVRAG 473
Query: 485 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATS 544
C GF NR Y ++ V G F +D A+ FGL +GPF + DLAG + T
Sbjct: 474 VCDGFIGNRILATYRKAIDGAVLAGASPFDVDRALVDFGLAMGPFAVSDLAGLDIGYMTR 533
Query: 545 KEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLS 604
+ R + D L + G +G+ G+G Y Y G +P P+ +L I E R
Sbjct: 534 QRLAATRDPREVYAEFSDKLCEDGHHGRKTGRGFYDY-SGEQPVPNDDILGYISEERAAK 592
Query: 605 NIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGI 664
I + S++++EI++ + +VNE+ V+EEGI R D+D + G FP +RGG
Sbjct: 593 GI----ESRSLSDQEIIDRYMAAMVNEAALVVEEGIAQRPLDVDVTLLNGYGFPRWRGGP 648
Query: 665 VFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+ +AD VG + + +K++++ ++P+ LE+ A +G
Sbjct: 649 MQYADTVGVDKILNDIKRFAEEDDFLWQPAPLLEKLAAEG 688
>gi|348028986|ref|YP_004871672.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola nitratireducens FR1064]
gi|347946329|gb|AEP29679.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein [Glaciecola
nitratireducens FR1064]
Length = 704
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 261/704 (37%), Positives = 386/704 (54%), Gaps = 36/704 (5%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A++ L PVNAL+ + G+ D ++A S D VKAIVL + FS G DI+ F
Sbjct: 16 LALVGLNGAPVNALSKALRIGIIDSVKKALSDDKVKAIVLYSHLPLFSAGADISEFS--- 72
Query: 75 GAGDVS-LMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGL 133
GD+S ++P+V +++IE KP++A V G A GGGLELA+ CH RI K ++GL
Sbjct: 73 -GGDLSPMLPEV-----LDVIEQSTKPVIAIVGGNAFGGGLELALACHYRITHAKNKVGL 126
Query: 134 PELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS-EELLKV 189
PE+ LG++PG TQRLPRL A++M ++S + T G+ D +V S +EL
Sbjct: 127 PEVHLGILPGAGGTQRLPRLTDPKTALDM-IVSGAPTPVTTLS-GVFDLIVDSADELQAA 184
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
+ +A D+ ++ P + + S EA + AK P H C+ ++
Sbjct: 185 AMAFATDVVEQQMPVKKVCDIELSMTSDIEALFEQYAQGVAAKTKGYFAPGH--CVLAVK 242
Query: 250 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 309
H G+ +E+++F E + +R H FFA+RA S V + + R +++VA
Sbjct: 243 AAFTHDFKDGLARESELFMECMKTSQARAQQHFFFAERAASHVQGIAK-DVVARDIKQVA 301
Query: 310 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 369
VIG G MG GIA I VV+ E+ + L KG+ I N +GKLT ++
Sbjct: 302 VIGAGTMGGGIAMNFANAGIPVVMLELKQDALDKGLALIRRNYENSAKKGKLTTEQVEQR 361
Query: 370 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 429
+ +L G Y + +VD+VIEAV E + +K+++F L+K C P ILA+NTST+DLN +
Sbjct: 362 MSLLTGTTSYEDLSNVDLVIEAVFEKMSVKKEVFGMLDKVCKPGAILASNTSTLDLNEIA 421
Query: 430 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 489
S +IG HFFSPA+VM LLEIVR E+T+ VI M + K I+KV V+VG C GF
Sbjct: 422 ASVSRPQDVIGLHFFSPANVMKLLEIVRGEKTADDVIKTAMKLAKTIRKVGVLVGVCFGF 481
Query: 490 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAA---ATSKE 546
NR PY + A L+ G ++D I FGLP+GPF + D+AG + + +E
Sbjct: 482 VGNRMIEPYGREANRLMLEGATPEQVDKVIGKFGLPMGPFTMGDMAGLDIGYFVRESRRE 541
Query: 547 FDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPII-EECRRLS 604
F K P + D L+ GR G GKG Y YE+GS+ P PDP V+ I +E +RL
Sbjct: 542 FIKHDPSYCI---VADKLVAQGRVGLKVGKGAYLYEQGSRQPIPDPEVIEIAKQEAKRL- 597
Query: 605 NIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGI 664
G + ++++EI+E ++P++NE +L+EGI ++SD+D V G FP +RGG
Sbjct: 598 ----GIQQREISDQEILERCIYPLINEGADILKEGIASKSSDIDVIYVYGYGFPVFRGGP 653
Query: 665 VFWADAVGANYVYTSLKKWSQLYGNF----FKPSRFLEERATKG 704
+ +AD +G V L + + G + F PS L + A G
Sbjct: 654 MQYADEIGLAEVRDRLNHYKETLGEYGQHWFTPSSLLNDLADAG 697
>gi|154252397|ref|YP_001413221.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Parvibaculum
lavamentivorans DS-1]
gi|154156347|gb|ABS63564.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Parvibaculum
lavamentivorans DS-1]
Length = 692
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 246/698 (35%), Positives = 377/698 (54%), Gaps = 27/698 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA++TL +PPVNAL+ P+ G+ + ++A D VKAIVL G F G DI F K
Sbjct: 16 VAVLTLNSPPVNALSAPVREGINNGIKQAMENDAVKAIVLICEGKTFIAGADITEFGKAP 75
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
S+ +N+IE KP++AA+ G ALGGGLE+A+ CH R+A P + GLP
Sbjct: 76 AG--------PSLFDALNMIEFASKPVIAAIHGTALGGGLEVALTCHYRVAVPSAKCGLP 127
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 191
E+ LG++PG TQRLPR+VG KA+EM+ + +++ ++GL+D + +L +
Sbjct: 128 EVNLGLLPGAGGTQRLPRIVGPEKALEMVTSGSHVGAKKCLEMGLVDELTEEGKLRDGAI 187
Query: 192 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 251
+A I A ++P R +DK+ + E+ R + + + IE
Sbjct: 188 AFAKKIVAEKRPLKRVRDLSDKVEAARGKPEIFSEFRKANARKFRGFLAPEYNIQCIEAA 247
Query: 252 IVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAV 310
+ G+ E K+F+ELV S HVFFA+R K+P+V D P V KV +
Sbjct: 248 VNLPFDEGIKVEQKLFRELVTGTQSAAQRHVFFAERQVWKLPDVPADTPTIP--VNKVGI 305
Query: 311 IGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNAL 370
IG G MG GIA + + V + E E L +GI TI N +G+ + ++ +
Sbjct: 306 IGAGTMGGGIAMNFLNVGLPVTIVETKQEALDRGIATIRKNYENSAKKGRFSMEEVEKRM 365
Query: 371 KMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGE 430
+L G L+ D D+VIEAV E++ +K+++FS+L+ ILATNTS ++++ +
Sbjct: 366 GLLTGSLEMEALADSDLVIEAVFENMDVKKQVFSKLDAIVKQGAILATNTSALNIDEIAT 425
Query: 431 KTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFA 490
+ +IG HFFSPA+VM LLE+VR ++TS VI M + K I K+ +VG C GF
Sbjct: 426 AVKRPEAVIGLHFFSPANVMRLLEVVRADKTSKPVIATSMQLAKKIGKIAALVGVCPGFV 485
Query: 491 VNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKA 550
NR + A+ L+ G + +D + FGLP+GPF + DLAG + SKE
Sbjct: 486 GNRILAQRQREAQKLILEGAMPWDVDRVLYDFGLPMGPFAMSDLAGLDI--GWSKE---- 539
Query: 551 FPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGG 610
+S + + D+L + R G+ G G Y Y++ KP P V II + + I
Sbjct: 540 ---KSQGATIRDVLCEMDRRGQKTGAGFYDYDENRNAKPSPVVEKIILDFAQKKGI---- 592
Query: 611 KPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADA 670
+++ EI+E ++P++NE ++LEEG +R+SD+D + G FP YRGG +F+ D
Sbjct: 593 NRRKISDDEILERCIYPMINEGAKILEEGKAIRSSDIDIVWINGYGFPVYRGGPMFYGDT 652
Query: 671 VGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLS 708
VGA+ V +K++ G+ FKP+ LE+ +G S
Sbjct: 653 VGADKVLAKMKEFQAQMGDDFKPAALLEKIVAEGKKFS 690
>gi|430805524|ref|ZP_19432639.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Cupriavidus sp. HMR-1]
gi|429502228|gb|ELA00543.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Cupriavidus sp. HMR-1]
Length = 715
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 255/700 (36%), Positives = 367/700 (52%), Gaps = 24/700 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA++ L NPPVN L AGL A V +VL G G F GG DI F
Sbjct: 22 VAVLWLDNPPVNGLGDTTRAGLHAGITRALQDATVAGVVLAGAGKAFCGGADIRQF-NTP 80
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
A L DV + LIE KP+VAA+ G+ALGGGLELAMGCH R+ A LGLP
Sbjct: 81 AATARPLSRDV-----LALIESASKPVVAAIHGVALGGGLELAMGCHYRVVASDASLGLP 135
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT-----SEEL 186
E+ LG++PG TQRLPRLVG+ +A++M+ ++ E ++GL DAV + +
Sbjct: 136 EVNLGLVPGGGGTQRLPRLVGVEQALDMIQQGVPVSGETAARIGLADAVADASPSGTRDA 195
Query: 187 LKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQA-KKTAPNMPQHQACL 245
V L A+D R H ++ +V R+ A A N AC+
Sbjct: 196 GPVVAL-AVDFCRRAAA-RAVAHPVASALAVKAGGDVDFGTRIAAINGKARNAIAQNACI 253
Query: 246 DVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGV 305
+E G+ E F+ LV + S+ L H+FFA+R K L+P +
Sbjct: 254 RCVEAATQLPIADGLAFERAQFEALVAGNESKALRHIFFAEREAPKFAEGKGQALRP--I 311
Query: 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDK 365
+VAVIG G MG GIA + + I V+L E L +G+ I N +GKL +
Sbjct: 312 ERVAVIGSGTMGVGIAMSFVNAGIPVMLIEREQAALDRGVALIRRNYEITAAKGKLAPQQ 371
Query: 366 ANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL 425
+ + + L + D D+V+EAV E + +KQ IF L+ C P ILATNTS +++
Sbjct: 372 IDARMGRITPTLAFEAVADADLVVEAVFEDMAVKQAIFERLDALCKPSAILATNTSRLNI 431
Query: 426 NIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 485
+ + T +IG HFFSPA+VM LLE+VR + T A VI M + + I+K+PV+V
Sbjct: 432 DTIAASTKRPGDVIGLHFFSPANVMKLLEVVRGQATHADVIASCMAMAQRIRKIPVLVRV 491
Query: 486 CTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSK 545
C GF NR PY + A L+ G ++D A+ FG+ +GP + DLAG + AT K
Sbjct: 492 CEGFVGNRMLTPYWREAGFLLEEGASPLQVDRALTQFGMAMGPLTMADLAGMDINWATRK 551
Query: 546 EFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLS 604
P S + D + + GR G+ G Y YE GS+ P PDP + +IE+C R +
Sbjct: 552 RLAPTRPAHLRYSAVADRICELGRFGQKTNGGYYRYEPGSRTPIPDPQIDALIEDCAREA 611
Query: 605 NIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGI 664
I +P++ ++EIVE + ++NE R+L+EGI RASD+D V G FP++RGG
Sbjct: 612 GI--ARRPVA--DEEIVERCMLALINEGARILDEGIAQRASDIDVVYVHGYGFPAWRGGP 667
Query: 665 VFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+F+A+ +G +V T ++ ++G ++P+ LE +G
Sbjct: 668 MFYAETLGLAHVLTRIRALQDVHGAHWEPAPLLERLVAEG 707
>gi|319793843|ref|YP_004155483.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase protein [Variovorax
paradoxus EPS]
gi|315596306|gb|ADU37372.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Variovorax
paradoxus EPS]
Length = 701
Score = 407 bits (1046), Expect = e-110, Method: Compositional matrix adjust.
Identities = 249/709 (35%), Positives = 382/709 (53%), Gaps = 33/709 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA+ITL NPPVN L G+ D +A + D VKAIV+TG G FSGG DI F
Sbjct: 11 VAVITLTNPPVNGLGFSTRIGITDGLAKANADDAVKAIVITGAGKAFSGGADIKEF---- 66
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G + + ++ V+ +E KPIVAA+ + +GGGLELA+GCH R+AAP T + LP
Sbjct: 67 --GTPKALQEPNLLSVILTLEASPKPIVAAIHSVCMGGGLELALGCHYRVAAPGTSIALP 124
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSE-----EGWKLGLIDAVVTSEEL 186
E+ LG+IPG TQRLPR++G+ A+ M++ + + SE G KL ++E +
Sbjct: 125 EVKLGLIPGAGGTQRLPRVIGVETALNMIVSGEPVKSELLASLPGQKL-FDKLAASAESV 183
Query: 187 LKVSRLWALDIAARRK---PWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQA 243
+ +A +A + P +R+L G + + + N P
Sbjct: 184 FDEAVAFAKSVAGKTGEALPLVRNLPCKHPQGD-----AYFQFTKNMVGGMSKNYPAPLM 238
Query: 244 CLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPR 303
C+D ++ G+ +E ++F L+ S L H+F A+RA SK+P+V + K R
Sbjct: 239 CIDAVQAATKMKFDQGMAEERRIFTALMFTPESLALRHLFMAERAASKIPDVPEDTPK-R 297
Query: 304 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQ 363
+ V VIG G MG GI+ + I V + E+ E L +G+ TI+ N V +GKL +
Sbjct: 298 EINSVGVIGAGTMGGGISMNFLNAGIPVKILEMKQEALDRGVATIKKNYEAQVKKGKLKE 357
Query: 364 DKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI 423
DK + +L L Y + KD D++IEAV E + +K+K+F EL++ ILA+NTST+
Sbjct: 358 DKYAQRMALLSTTLSYDDLKDADLIIEAVFEEIGVKEKVFKELDRVAKKGAILASNTSTL 417
Query: 424 DLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVV 483
D++ + T ++G HFFSPA+VM LLE+VR + T+ V+ +M +GK IKK VV
Sbjct: 418 DVDKIASFTERPQDVVGMHFFSPANVMKLLEVVRGKATAKDVLATVMAIGKKIKKTSVVS 477
Query: 484 GNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAAT 543
G C GF NR YS+ A L+ G ++D AI FG +GPF++ DLAG + A
Sbjct: 478 GVCDGFIGNRMIEQYSRQAGFLLDEGATPQQVDKAIEKFGFAMGPFRMGDLAGNDIGWAI 537
Query: 544 SKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVLPIIEECRR 602
K D + S D L + GR G+ G G Y Y+ G + P V +IE+ R+
Sbjct: 538 RKRRATERADMKY-SRTADKLCELGRFGQKTGAGWYDYQAGKRDAIPSDLVNKMIEDHRK 596
Query: 603 LSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRG 662
I P ++++EIV+ +++ +VNE +LE+GI ++ D+D + G FP +RG
Sbjct: 597 ELGITPR----KISDEEIVQRLVYALVNEGAHILEDGIASKSGDIDMVYLTGYGFPIWRG 652
Query: 663 GIVFWADAVGANYVYTSLKKWSQL---YGNFFKPSRFLEERATKGIPLS 708
G + +A VG V S+K++++ F++P+ +++ +G S
Sbjct: 653 GPMHYASQVGLYNVAESMKRFAKNPRDDAEFWQPAPLIQKLVAEGKSFS 701
>gi|160898754|ref|YP_001564336.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Delftia acidovorans
SPH-1]
gi|160364338|gb|ABX35951.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Delftia acidovorans
SPH-1]
Length = 703
Score = 407 bits (1046), Expect = e-110, Method: Compositional matrix adjust.
Identities = 258/723 (35%), Positives = 392/723 (54%), Gaps = 40/723 (5%)
Query: 6 VTMEVGNDG-VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGG 64
+T E DG +A+ITL NPPVN L + G+ + ++A S VKAIV+TG G FSGG
Sbjct: 1 MTAEYKVDGAIAVITLNNPPVNGLGLSTRRGIVEGLDKAYSDPAVKAIVITGAGKAFSGG 60
Query: 65 FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
DIN F K + L+ ++N ++ KP+VAA+ + +GGGLELA+GC+ R+
Sbjct: 61 ADINEFGKEEAYREPHLVS------LINSLDQGSKPVVAAIHTVCMGGGLELALGCNYRV 114
Query: 125 AAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSE-----EGWKLGL 176
AAP T + LPE+ LG++PG TQRLPR++G+ A+ M++ + + SE G KL
Sbjct: 115 AAPGTLVALPEVKLGLLPGAGGTQRLPRVLGVETALNMIVSGEPVKSELLASIPGQKL-- 172
Query: 177 IDAVVTS-EELLKVSRLWALDIAARRK-----PWIRSLHRTDKLGSLSEAREVLKLARLQ 230
D + S E LL ++ +AL++A + P +R L G + AR
Sbjct: 173 FDKMAASPESLLDEAKAFALEVADKHAAGGPLPRVRDLPCKHPQGD-----AYFQFARNM 227
Query: 231 AKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATS 290
K A N P C+D +E G+ E F +L+ SR L H+F A+RA S
Sbjct: 228 VKGMAKNYPAPARCVDTVENAARKKFDEGMALERDAFMQLMWSPESRALRHLFMAERAAS 287
Query: 291 KVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIE 349
K+ +V +D + R ++ V VIG G MG GI+ + I V + E E L +G+ TI
Sbjct: 288 KIADVPSDTAV--RDIKTVGVIGAGTMGGGISMNFLNAGIPVTILETKQEALDRGVATIR 345
Query: 350 ANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKA 409
N V +GKLTQ+K + + +L L Y K+ D++IEAV E + +K+ +F +L++
Sbjct: 346 KNYEAQVKKGKLTQEKYDQRMALLSTTLSYDALKNADLIIEAVFEELGVKETVFKQLDEV 405
Query: 410 CPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDL 469
P ILA+NTST+D++ + T ++G HFFSPA+VM LLE+VR + T+ V+ +
Sbjct: 406 AKPGAILASNTSTLDVDKIAAFTKRPQDVVGMHFFSPANVMKLLEVVRGKHTAKDVLATV 465
Query: 470 MTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 529
M + K IKK VV G C GF NR YS+ A L+ G ++D AI FG +GPF
Sbjct: 466 MKLAKKIKKTAVVSGVCDGFIGNRMIEQYSRQAGFLLDEGATPAQVDKAIEKFGFAMGPF 525
Query: 530 QLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK- 588
++ DLAG + A K D + S D L + GR G+ G G Y Y+ G +
Sbjct: 526 RMGDLAGNDIGWAIRKRRAVERADMKY-SRTADKLCELGRFGQKTGAGWYDYQAGKRDAI 584
Query: 589 PDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLD 648
P V +IE R+ I P ++++EIV+ ++F +VNE +LE+GI ++ D+D
Sbjct: 585 PSELVNQMIESHRKELGIT----PRKISDEEIVQRLVFALVNEGAHILEDGIAGKSGDID 640
Query: 649 DASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL---YGNFFKPSRFLEERATKGI 705
+ G FP +RGG + +A VG V ++ ++++ +F++P+ L + A +G
Sbjct: 641 MVYLTGYGFPIWRGGPMHYAGEVGLFNVVQAMNRFAKNPNDDADFWQPAPLLAKLAAEGK 700
Query: 706 PLS 708
S
Sbjct: 701 QFS 703
>gi|418531196|ref|ZP_13097113.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Comamonas testosteroni
ATCC 11996]
gi|371451698|gb|EHN64733.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Comamonas testosteroni
ATCC 11996]
Length = 699
Score = 407 bits (1046), Expect = e-110, Method: Compositional matrix adjust.
Identities = 254/717 (35%), Positives = 388/717 (54%), Gaps = 32/717 (4%)
Query: 6 VTMEVGNDG-VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGG 64
+T E DG +A+ITL NPPVN L + G+ + +A + D VKAIV+TG G FSGG
Sbjct: 1 MTAEYKVDGAIAVITLNNPPVNGLGLATRRGVVEGLRQALADDAVKAIVITGAGKAFSGG 60
Query: 65 FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
DI F K + L+ V+ ++ KP++AA+ + +GGGLELA+GCH RI
Sbjct: 61 ADITEFGKEDAYREPHLIS------VIQQLDLSTKPVIAAIHSVCMGGGLELALGCHYRI 114
Query: 125 AAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSE-----EGWKLGL 176
AAP T + LPE+ LG++PG TQRLPR++G+ A+ M++ +++ SE G KL
Sbjct: 115 AAPGTAVALPEVKLGLLPGAGGTQRLPRVLGVEAALNMIVSGETVMSEMLAMLPGQKL-- 172
Query: 177 IDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAP 236
+ + S E L A +P R + K + + A + +
Sbjct: 173 FNKMSASAETLLAEAKALALEVADVRPLPRVRDLSCKH---PQGEAYFEFAATMVQGMSK 229
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P CL+ ++ G++ E + F +L+M SR L H+F A+RA SK+P+V
Sbjct: 230 NFPAPLRCLEAVKNATTKKFDDGMVAEREAFMQLMMTPESRSLRHLFMAERAASKIPDVP 289
Query: 297 DIGLKP-RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGL 355
G P R +R V VIG G MG GI+ + I V + E E L +G+ TI N
Sbjct: 290 --GDTPVREIRTVGVIGAGTMGGGISMNFLNAGIPVTILETKQEALDRGVATIRKNYEAQ 347
Query: 356 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCI 415
V +GKL++ K + +L L+Y + K+ D++IEAV E + +K+++F +L++ P I
Sbjct: 348 VKKGKLSEQKYEQRMGLLSTTLNYGDLKNADLIIEAVFEELGVKEQVFKQLDEVAKPGAI 407
Query: 416 LATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKI 475
LA+NTST+D++ + T ++G HFFSPA+VM LLE+VR + T+ V+ +M VGK
Sbjct: 408 LASNTSTLDVDKIAAFTKRPQDVVGMHFFSPANVMKLLEVVRGKATAKDVLATVMKVGKK 467
Query: 476 IKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLA 535
IKK VV G C GF NR YS+ A L+ G ++D AI FG +GPF++ DLA
Sbjct: 468 IKKTAVVSGVCDGFIGNRMIEQYSRQAGFLLDEGASPQQVDKAIEKFGFAMGPFRMGDLA 527
Query: 536 GYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVL 594
G + A K PD + S D L + GR G+ G G Y Y G + P V
Sbjct: 528 GNDIGWAIRKRRYVEKPDMKY-SASADRLCELGRFGQKTGAGWYDYVPGKRDAIPSEVVA 586
Query: 595 PIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLG 654
+I+E R+ I P ++++EIV+ +++ +VNE +LE+GI ++ D+D + G
Sbjct: 587 KMIDEHRKSLGIT----PRKISDEEIVQRLVYALVNEGAHILEDGIASKSGDIDMVYLTG 642
Query: 655 MSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN---FFKPSRFLEERATKGIPLS 708
FP +RGG + +A VG V ++ +++Q + F++P+ L + A +G S
Sbjct: 643 YGFPLWRGGPMHYAGEVGLFNVVQAMGRFAQNPNDDAKFWQPAPLLAKLAAEGKQFS 699
>gi|16127419|ref|NP_421983.1| fatty oxidation complex subunit alpha [Caulobacter crescentus CB15]
gi|13424863|gb|AAK25151.1| fatty oxidation complex, alpha subunit [Caulobacter crescentus
CB15]
Length = 692
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 252/708 (35%), Positives = 387/708 (54%), Gaps = 26/708 (3%)
Query: 1 MAAPRVTMEVGNDG-VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGG 59
MAA + +G + ++TL +PPVNAL+ + GL+ F+ A + VKAIVL +G
Sbjct: 1 MAAINAVTDFSVEGDIGVVTLNSPPVNALSAAVREGLQGAFDAAIADAAVKAIVLICDGK 60
Query: 60 RFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMG 119
F G DI F K M S++ V N+IE+ KP++AA+ G ALGGGLE+A+
Sbjct: 61 TFIAGADITEFGKA--------MTGPSLQDVQNVIENSPKPVIAAIHGTALGGGLEVALV 112
Query: 120 CHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGL 176
+ R+A P + GLPE+ +G++PG TQRLPR+VG+ KA+EM+ + + ++ +GL
Sbjct: 113 ANYRVAVPSAKAGLPEVNIGLLPGAGGTQRLPRIVGVEKALEMVTTGQHVPAKAAHAMGL 172
Query: 177 IDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAP 236
D +V +L + + +A + A +P + +K+ + E+ + R K
Sbjct: 173 FDELVEEGKLREGAIAFAKAVVAENRPLKKVRDLNEKVEAARGKPEIFEAFRKANAKKFR 232
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
+ + IE + G+ E K+F EL+ S +VFFA+R +K+P+V
Sbjct: 233 GFMAPENNIKCIEAAVNLPFDEGLKAERKLFMELMTGSQSAAQRYVFFAERQAAKIPDVP 292
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D V+KV VIG G MG GIA + I V + E E L +G+ I N
Sbjct: 293 D-DTPTIPVKKVGVIGAGTMGGGIAMNFLNAGIPVTIIEAKQENLERGVGIIRKNYENTA 351
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
+G+LTQD + +L ++ D DM+IEAV E + +K+++F++L+K P IL
Sbjct: 352 KKGRLTQDDVEKRMALLTPSMEMEALADCDMIIEAVFELMEIKKEVFTKLDKIAKPGAIL 411
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
ATNTS +D++ + TS + +IG HFFSPA+VM LLE+VR ++TS VI M + K I
Sbjct: 412 ATNTSYLDVDAIAAVTSRPESVIGTHFFSPANVMRLLELVRGDKTSKDVIATCMKLSKTI 471
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
KVPV+VG C GF NR + A+ L+ G + +D + FGLP+GPF + DLAG
Sbjct: 472 GKVPVLVGVCYGFVGNRMLAQRQREAQKLILEGAMPWDVDRVLYDFGLPMGPFAMSDLAG 531
Query: 537 YGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPI 596
+ +D P ++ S + ++L + R G+ NGKG Y Y++ KP P V +
Sbjct: 532 LDIG------WD---PAKTSSSTVREVLCEMDRRGQKNGKGFYDYDENRNAKPSPVVEEV 582
Query: 597 IEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMS 656
I + I + +T++EI+E L+P+VNE ++LEEG +RASD+D + G
Sbjct: 583 IRDFAEKRQI----QRREITDQEILERCLYPMVNEGAKILEEGKAIRASDIDIVWINGYG 638
Query: 657 FPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+P Y GG +FW + VG + V +K++ G+ FKPS LE +G
Sbjct: 639 WPVYSGGPMFWGELVGLDKVLAKMKQFHAELGDDFKPSALLERLVAEG 686
>gi|452752262|ref|ZP_21952005.1| Enoyl-CoA hydratase [alpha proteobacterium JLT2015]
gi|451960338|gb|EMD82751.1| Enoyl-CoA hydratase [alpha proteobacterium JLT2015]
Length = 685
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 245/697 (35%), Positives = 373/697 (53%), Gaps = 29/697 (4%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+D V ++ NPPVNAL + GLK+ E + D VKAIV+ +G F G DI F
Sbjct: 10 HDDVLVVISDNPPVNALGAAVRQGLKEGVEAGLADDSVKAIVIRCDGRTFHAGADITEFG 69
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K S+ ++ +E KPIVAA+ G ALGGGLE+A+ CH R+A P +L
Sbjct: 70 KPPQG--------PSLPETLDAMEASAKPIVAAIHGTALGGGLEVALACHYRVAVPSAKL 121
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
GLPE+ LG++PG TQRLPR+VG+ KA++M++ + I + E K+GL+D + E+ L+
Sbjct: 122 GLPEVNLGLLPGAGGTQRLPRVVGVEKALDMIVFGRPIGAGEAEKIGLVD-TLAGEDSLE 180
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 248
+ A+ + RTD+L + ++ + + + AC+ +
Sbjct: 181 ADAIAFAREKAKADSHPATSRRTDRLPDAAHIGQIFDDFKAKNGRKMRGFDAPAACMRCV 240
Query: 249 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRK 307
GV E + F +L+ D S+ H+FFA+R +K+ +V D L P +RK
Sbjct: 241 RAAAELPYVEGVKVEREEFMKLMQGDQSKAQRHLFFAERQAAKIDDVPKDTPLIP--IRK 298
Query: 308 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 367
V +IG G MG GIA + I V + E+ E L +G + N G V RG+++++KA
Sbjct: 299 VGIIGAGTMGGGIAMNFLSAGIPVTMLEMKQEALDRGTGVMGKNYEGNVKRGRMSEEKAK 358
Query: 368 NALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 427
A+ +L LDY++ D D+VIEAV ES+ +K+ +F +L+ ILA+NTS ++++
Sbjct: 359 AAMDLLSTTLDYADLADCDLVIEAVFESMDVKKDVFGKLDAHVKDGAILASNTSYLNVDE 418
Query: 428 VGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 487
+ + T ++G HFFSPA+VM LLE+VR T V+ +M + K I KV VV G C
Sbjct: 419 IAQATKRPGYVVGMHFFSPANVMKLLEVVRGAETRPDVLATVMALSKKIGKVAVVAGVCH 478
Query: 488 GFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEF 547
GF NR P + A L+ G ++ID + FG+P+GPFQ+ DLAG +
Sbjct: 479 GFIGNRMLSPRQREANKLIMEGATPWQIDKVHQEFGMPMGPFQMSDLAGLDIGWHR---- 534
Query: 548 DKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIM 607
D + L D L R G+ G G Y Y++ + P +V +I +
Sbjct: 535 -----DTNRIESLRDELCAMDRRGQKTGAGFYDYDENRRGTPSDTVEALIRKWAEKE--- 586
Query: 608 PGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFW 667
G ++++EI E L+P+VNE +LEEG+ RASD+D + G +P YRGG +FW
Sbjct: 587 -GTPQREISDEEIRERTLYPMVNEGALILEEGMAQRASDIDVVWIYGYGWPRYRGGPMFW 645
Query: 668 ADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
AD GA+ + L+K + K S+ L+++A KG
Sbjct: 646 ADLEGADTILAGLEKHQDKMPD-LKISQLLKDKAAKG 681
>gi|221236228|ref|YP_002518665.1| multifunctional enoyl-CoA
hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase/3-hydroxyacyl-CoA
dehydrogenase/3-hydroxybutyryl-CoA epimerase
[Caulobacter crescentus NA1000]
gi|220965401|gb|ACL96757.1| enoyl-CoA hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase/3-hydroxyacyl-CoA
dehydrogenase/3-hydroxybutyryl-CoA epimerase
[Caulobacter crescentus NA1000]
Length = 696
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 252/708 (35%), Positives = 387/708 (54%), Gaps = 26/708 (3%)
Query: 1 MAAPRVTMEVGNDG-VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGG 59
MAA + +G + ++TL +PPVNAL+ + GL+ F+ A + VKAIVL +G
Sbjct: 5 MAAINAVTDFSVEGDIGVVTLNSPPVNALSAAVREGLQGAFDAAIADAAVKAIVLICDGK 64
Query: 60 RFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMG 119
F G DI F K M S++ V N+IE+ KP++AA+ G ALGGGLE+A+
Sbjct: 65 TFIAGADITEFGKA--------MTGPSLQDVQNVIENSPKPVIAAIHGTALGGGLEVALV 116
Query: 120 CHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGL 176
+ R+A P + GLPE+ +G++PG TQRLPR+VG+ KA+EM+ + + ++ +GL
Sbjct: 117 ANYRVAVPSAKAGLPEVNIGLLPGAGGTQRLPRIVGVEKALEMVTTGQHVPAKAAHAMGL 176
Query: 177 IDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAP 236
D +V +L + + +A + A +P + +K+ + E+ + R K
Sbjct: 177 FDELVEEGKLREGAIAFAKAVVAENRPLKKVRDLNEKVEAARGKPEIFEAFRKANAKKFR 236
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
+ + IE + G+ E K+F EL+ S +VFFA+R +K+P+V
Sbjct: 237 GFMAPENNIKCIEAAVNLPFDEGLKAERKLFMELMTGSQSAAQRYVFFAERQAAKIPDVP 296
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D V+KV VIG G MG GIA + I V + E E L +G+ I N
Sbjct: 297 D-DTPTIPVKKVGVIGAGTMGGGIAMNFLNAGIPVTIIEAKQENLERGVGIIRKNYENTA 355
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
+G+LTQD + +L ++ D DM+IEAV E + +K+++F++L+K P IL
Sbjct: 356 KKGRLTQDDVEKRMALLTPSMEMEALADCDMIIEAVFELMEIKKEVFTKLDKIAKPGAIL 415
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
ATNTS +D++ + TS + +IG HFFSPA+VM LLE+VR ++TS VI M + K I
Sbjct: 416 ATNTSYLDVDAIAAVTSRPESVIGTHFFSPANVMRLLELVRGDKTSKDVIATCMKLSKTI 475
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
KVPV+VG C GF NR + A+ L+ G + +D + FGLP+GPF + DLAG
Sbjct: 476 GKVPVLVGVCYGFVGNRMLAQRQREAQKLILEGAMPWDVDRVLYDFGLPMGPFAMSDLAG 535
Query: 537 YGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPI 596
+ +D P ++ S + ++L + R G+ NGKG Y Y++ KP P V +
Sbjct: 536 LDIG------WD---PAKTSSSTVREVLCEMDRRGQKNGKGFYDYDENRNAKPSPVVEEV 586
Query: 597 IEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMS 656
I + I + +T++EI+E L+P+VNE ++LEEG +RASD+D + G
Sbjct: 587 IRDFAEKRQI----QRREITDQEILERCLYPMVNEGAKILEEGKAIRASDIDIVWINGYG 642
Query: 657 FPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+P Y GG +FW + VG + V +K++ G+ FKPS LE +G
Sbjct: 643 WPVYSGGPMFWGELVGLDKVLAKMKQFHAELGDDFKPSALLERLVAEG 690
>gi|333892777|ref|YP_004466652.1| 3-hydroxyacyl-CoA dehydrogenase [Alteromonas sp. SN2]
gi|332992795|gb|AEF02850.1| 3-hydroxyacyl-CoA dehydrogenase [Alteromonas sp. SN2]
Length = 706
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 262/709 (36%), Positives = 376/709 (53%), Gaps = 40/709 (5%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
GVA IT+ + PVNAL+ + GL D E A S D V AIV+T + FSGG DI+ F
Sbjct: 14 QQGVATITMQSAPVNALSRAVRVGLIDGIESALSDDSVSAIVITSSLALFSGGADISEFS 73
Query: 72 KVHGAGDVS-LMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQ 130
GD+S +P+V ++ IE+ KP+VA + G A GGGLE+A+ CH RI Q
Sbjct: 74 ----GGDLSPNLPEV-----LDKIENATKPVVAVLPGPAFGGGLEVALACHHRITFAGNQ 124
Query: 131 LGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKL-GLIDAVVTS-EE 185
+GLPE+ LG++PG TQRLPRL + A+ M++ K + KL G+ D + E
Sbjct: 125 VGLPEVNLGILPGAGGTQRLPRLADPATALTMIVTGKPTSV---VKLPGVFDKISDKPEH 181
Query: 186 LLKVSRLWALDIAARRKPWIRSLHRTDK--LGSLSEAREVLKLARLQAKKTAPNMPQHQA 243
LL+ ++ + + A + RT L E + V Q KK A
Sbjct: 182 LLEDTKQYLASLNAEN-----CIKRTSDITLTMSEEVQGVFDAVTAQTKKAARGFFAPLK 236
Query: 244 CLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPR 303
C++ ++ G+ E K+F E + +R H FFA+RA V + D R
Sbjct: 237 CIEAVKGAYTLAFEDGLKHEGKLFMECMNTPQARAQQHFFFAERAAGHVSDF-DKSTPER 295
Query: 304 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQ 363
+ KVAVIG G MG GIA I V + E+ E L KG+ I N +GKLTQ
Sbjct: 296 SIEKVAVIGAGTMGGGIAMNFANAGIPVTMLELKQEALDKGLALIRKNYENSAKKGKLTQ 355
Query: 364 DKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI 423
++ + +L G Y + DVD+VIEAV E + +K+ +F+ L+K C P ILA+NTST+
Sbjct: 356 EQVETRMALLSGTTTYDDLADVDLVIEAVFEKMEVKKTVFTTLDKVCKPGAILASNTSTL 415
Query: 424 DLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVV 483
D+N + TS +IG HFFSPA+VM LLE+V+ E TSA VI M + K IKKV V+V
Sbjct: 416 DVNEIAACTSRPQDVIGLHFFSPANVMKLLEVVKAEDTSADVIKTCMKLAKRIKKVAVLV 475
Query: 484 GNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAAT 543
G C GF NR PY + A L+ G ++D + FG+P+GPF + D+AG +
Sbjct: 476 GVCFGFVGNRMIEPYGREANRLLLEGASPEQVDRVLTQFGMPMGPFTMGDMAGLDIGYYV 535
Query: 544 SKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPII-EECR 601
+ + D L++ RNG G+G Y YE GS+ P PDP VL I +E
Sbjct: 536 RQSRQAFISHDPTYGAVADRLVEKDRNGLKTGRGAYLYEAGSRVPIPDPEVLEIAKQEAA 595
Query: 602 RLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYR 661
RL + ++++EI+ L+ ++NE +LEEGI ++SD+D V G FP YR
Sbjct: 596 RLGVT----QRDDISDEEILVRCLYTLINEGACILEEGIAAKSSDIDVIYVYGYGFPVYR 651
Query: 662 GGIVFWADAVGANYVYTSLKKWSQLYGNF----FKPSRFL----EERAT 702
GG + +AD VG + L +++ G++ +PS L +ER++
Sbjct: 652 GGPMQYADEVGLGEIVDKLSTYAERLGDYGKMWLQPSDLLIKLAQERSS 700
>gi|346991676|ref|ZP_08859748.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Ruegeria sp. TW15]
Length = 697
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 253/700 (36%), Positives = 381/700 (54%), Gaps = 35/700 (5%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A+++ NPPVNAL + GL E A + D V+A+++ G G + G DI F K
Sbjct: 13 IAVLSANNPPVNALGAEVRQGLLAGIERAEA-DGVQAVLIYGEGRTYFAGADIREFGKPP 71
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
D + + + IE +V+++ G ALGGGLE+A+ CH RIA P T++GLP
Sbjct: 72 --------QDPWLPALCDRIEASPLMVVSSLHGTALGGGLEVALSCHYRIATPLTKVGLP 123
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEE----LL 187
E+ LG+IPG TQRLPR+ G+ A+EM+ + + + E ++G++D V + L
Sbjct: 124 EVNLGIIPGAGGTQRLPRVAGVEAALEMITTGRHVQASEALQMGVLDKVQDGDPREIGLA 183
Query: 188 KVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDV 247
V L L+ A R+P + + + + + VLK R Q +C
Sbjct: 184 FVRDL--LETGAPRRP-VCEMAKPTPIDFDATYDAVLKKGRGQLSPAIAVRAVQASCE-- 238
Query: 248 IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRK 307
H +G +E ++F EL+ D +GL+H FFA+RA SK+P + G+ PR + +
Sbjct: 239 -----AHDFAAGQARERELFTELMASDQRKGLIHAFFAERAVSKLPELQ--GINPRELHQ 291
Query: 308 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 367
+ V+GGG MG+GIAT+ +L + VVL E++ + I AN+ G V RGKL+ D
Sbjct: 292 IGVVGGGTMGAGIATSALLAGLTVVLLEMSVDAAKAAKDRIAANLAGAVKRGKLSPDAQE 351
Query: 368 NALK-MLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 426
L+ + DY VD+VIEAV E + +K+++F++L+ C +LATNTS +DLN
Sbjct: 352 EILENRITLSTDYDGLSGVDLVIEAVFEDMEIKKQVFAKLDATCKSGAVLATNTSYLDLN 411
Query: 427 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 486
+ T +IG HFFSPAHVM LLEIV + T+ +VI +GK + KV V G C
Sbjct: 412 EIAASTGRPSDVIGLHFFSPAHVMKLLEIVVADHTAPEVIATGFALGKRLGKVSVRAGVC 471
Query: 487 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVA-AATSK 545
GF NR Y A +V G F+ID+A+ FG +GPF + DLAG + AA +
Sbjct: 472 DGFIGNRILNAYRTCADHMVLDGASPFQIDAALTRFGFAMGPFAVSDLAGLDIGWAARKR 531
Query: 546 EFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKP-KPDPSVLPIIEECRRLS 604
+ R+ +S D L ++G G+ GKG Y YE G++ KP+P ++P+IE R
Sbjct: 532 KRATGLDPRARESFYADKLCEAGHFGQKTGKGYYVYEPGNRSRKPNPEIMPLIEAERAAK 591
Query: 605 NIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGI 664
I P T++EIV + +VNE+ +V+ EGI R D+D + G FP Y GG
Sbjct: 592 GI----SPREFTDEEIVRRYMIAMVNEAAKVVGEGIARRPLDVDITLLYGYGFPRYWGGP 647
Query: 665 VFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+ WAD G + V +++WS +++P+ LE+ AT+G
Sbjct: 648 LKWADLQGLSDVVDDIRRWSGEDPYYWQPAPLLEKLATEG 687
>gi|73537708|ref|YP_298075.1| 3-hydroxyacyl-CoA dehydrogenase [Ralstonia eutropha JMP134]
gi|72121045|gb|AAZ63231.1| 3-hydroxyacyl-CoA dehydrogenase [Ralstonia eutropha JMP134]
Length = 704
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 245/696 (35%), Positives = 378/696 (54%), Gaps = 24/696 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
V +IT+ NPPVNAL + + GLK E+A + V+A+++ G G F G DI F K
Sbjct: 16 VQVITICNPPVNALGVAVRQGLKQAIEQAEADAGVRAVLVVGEGTAFIAGADIREFGK-- 73
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
MP S+ V N IE K +VAA+ G ALGGGLE+AM H R+A P +LGLP
Sbjct: 74 -----PPMPP-SLPEVCNQIEASNKLVVAAIHGPALGGGLEVAMSAHYRLALPAAKLGLP 127
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 191
E+ LG++PG TQR PRL+G+ A ++ML K ++++ GL+D + ++ +
Sbjct: 128 EVNLGLLPGAGGTQRAPRLMGVKAAADLMLSGKHLSAKAAQAAGLVDRLAEGDDPVAAGL 187
Query: 192 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAK--KTAPNMPQHQACLDVIE 249
+ ++ + P L RT L +A + +L LQA+ K + Q ++ +
Sbjct: 188 AYVNELLEQGAP----LRRTRDLAIADKAAALAELDTLQAETAKKTRGLFSPQKIVECVR 243
Query: 250 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 309
+ G+ KE +F E + GLVH FFA+R T+KVP G PR + ++A
Sbjct: 244 AAVELPFDEGLAKERALFVECLNSPQRAGLVHAFFAERETAKVPEAQ--GAAPRALNRIA 301
Query: 310 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 369
VIGGG MG+GI A + + VV+ E ++E + +G +E GL+ +G++T +
Sbjct: 302 VIGGGTMGAGITVAALDTGLPVVMIERDAESIARGQANVEKVYDGLIAKGRMTPEGKAAI 361
Query: 370 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 429
+ Y DVD+VIEAV E + +K+ +F +L++ C P +LATNTS +D++ +
Sbjct: 362 MARYTPSTSYESIADVDLVIEAVFEDIEVKKAVFQQLDRVCKPGAVLATNTSYLDIDAIA 421
Query: 430 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 489
S +IG HFFSPA++M LLEIV + S V++ + K +KK+PV G C GF
Sbjct: 422 GSISRPQDVIGLHFFSPANIMKLLEIVVPAKVSPDVVVTAFELAKRMKKIPVRAGVCDGF 481
Query: 490 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDK 549
NR Y Q+A ++ G + ID A+R FG P+GPFQ+ DLAG + AT K
Sbjct: 482 IGNRILAVYKQAADYIMEDGASPYEIDEAVRGFGYPMGPFQVTDLAGGDIGWATRKRRAA 541
Query: 550 AFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIMP 608
++ + D + + G G+ G+G Y Y +G++ +PD VL I+E R+ I P
Sbjct: 542 TRDPKARYVEVADRICERGWFGQKTGRGFYLYPQGARIGQPDREVLAIVEAERQKKGIAP 601
Query: 609 GGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWA 668
T +EI+ + +VNE +V+EEGI +R D+D + G FP +RGG + +A
Sbjct: 602 R----KFTAEEIMRRYMAAMVNEGAKVVEEGIALRPLDVDVTFLSGYGFPRFRGGPMKYA 657
Query: 669 DAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
D VG + ++ +++ F+KP+ LE+ +G
Sbjct: 658 DMVGLPKILEDIRTFAKEDPLFWKPAPLLEKLVAEG 693
>gi|377820680|ref|YP_004977051.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Burkholderia sp. YI23]
gi|357935515|gb|AET89074.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Burkholderia sp. YI23]
Length = 694
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 248/696 (35%), Positives = 371/696 (53%), Gaps = 25/696 (3%)
Query: 14 GVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKV 73
GVA+ITL NPPVN L G+ + A ++V+AIV+ G G FSGG DI F
Sbjct: 10 GVAVITLDNPPVNGLGHSTRLGIVEGIGRANGDENVRAIVIIGAGKAFSGGADITEFNTP 69
Query: 74 HGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGL 133
+ +L V+ +E KP+VAA+ +A+GGGLELA+G H R+A+P Q+ L
Sbjct: 70 KATREPTLT------TVIKALEASAKPVVAAIHAVAMGGGLELALGAHYRVASPGAQIAL 123
Query: 134 PELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE--ELLK 188
PE+ LG++PG TQRLPR+VGL A+ M++ + SE+ + GL D + + E
Sbjct: 124 PEVKLGLLPGAGGTQRLPRVVGLETALNMIVSGTPVLSEKLAQTGLFDELAEGDLLEAAL 183
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 248
A D + P +R D+ A ++ AR A + P C+D I
Sbjct: 184 SLASQAADKGSEH-PKVR-----DRKIDHPNAEGFIQFARNGVAAAAKHFPAPHKCIDAI 237
Query: 249 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 308
E+G+ G G+ E + F LV SR L H FF +RA K+ +V G R + +V
Sbjct: 238 EKGVKEGFERGLAFERECFLSLVQTPESRALRHAFFGERAAGKIADVPP-GTPVRTIARV 296
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
V+G G MG GIA + V L E E L +G+ TI + +GKLT+++A
Sbjct: 297 GVVGAGTMGGGIAMTFLNAGFPVTLLETKQEALDRGLATIRGHYEAQAAKGKLTREQAEA 356
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
+ ++ L Y + D D++IEAV E + +K+ +F +L++ P +LA+NTST+DLN +
Sbjct: 357 RMALITPTLVYGDLADADLIIEAVFEDLSVKESVFRQLDQCAKPGAVLASNTSTLDLNRI 416
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
T +IG HFFSPA+VM LLE+VR E+T V+ +M + K I+K VV G C G
Sbjct: 417 ASFTQRPGDVIGMHFFSPANVMKLLEVVRGEKTGKDVLATVMQLAKKIRKTAVVSGVCDG 476
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR Y + A ++ G +ID AI FG +GPF++ DLAG + A K
Sbjct: 477 FIGNRMIEQYIRQALFMLEEGALPAQIDRAIEKFGFAMGPFRMSDLAGNDIGWAIRKRRY 536
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVLPIIEECRRLSNIM 607
+ P + S + D L ++GR G+ G G Y Y+ G + P +V +I I
Sbjct: 537 REQPALHY-SGIADTLCEAGRFGQKTGAGWYDYQAGKREALPSQAVDAMIVAYSNERGI- 594
Query: 608 PGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFW 667
+ ++EIVE ++ +VNE ++LEEGI +ASD+D + G FP +RGG + +
Sbjct: 595 ---ARRRIGDEEIVERLVLALVNEGAKILEEGIAAKASDIDMVYLTGYGFPLWRGGPMLY 651
Query: 668 ADAVGANYVYTSLKKWS-QLYGNFFKPSRFLEERAT 702
AD +G V ++++++ Q G ++PS + E AT
Sbjct: 652 ADTIGLYNVERAIRQYAKQANGEAWQPSARVTELAT 687
>gi|413962686|ref|ZP_11401913.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia sp. SJ98]
gi|413928518|gb|EKS67806.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia sp. SJ98]
Length = 694
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 247/695 (35%), Positives = 377/695 (54%), Gaps = 23/695 (3%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVN L G+ + E A DV+AIV+ G G FSGG DI F
Sbjct: 9 DGVAVITLDNPPVNGLGHSTRLGIVEGVERANDDADVRAIVIIGAGKAFSGGADITEFNT 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ +LM V+ +E KP+VAA+ +A+GGGLELA+G H R+A P Q+
Sbjct: 69 PKATQEPTLM------TVIATLEASAKPVVAAIHAVAMGGGLELALGAHYRVAVPGAQIA 122
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 189
LPE+ LG++PG TQRLPR+VGL A+ M++ + SE+ + L D + + LL+
Sbjct: 123 LPEVKLGLLPGAGGTQRLPRVVGLETALNMIVSGAPVPSEKLAQTALFDELADGD-LLES 181
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
+ +A A R P + D+ A ++ AR A + P C+D IE
Sbjct: 182 ALSFARRAADRGGPHPKV---RDRQIEHPNAEGFIQFARNSVAGVAKHFPAPHKCIDAIE 238
Query: 250 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 309
+G+ G G+ E + F LV SR L H FF +RA +K+ +V R + ++
Sbjct: 239 KGVKEGFERGLAFERECFLALVQTPESRALRHAFFGERAAAKIADVPS-NTPVRKIERIG 297
Query: 310 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 369
VIG G MG GIA + + VVL E + L +GI TI N V +GKLTQ+K
Sbjct: 298 VIGAGTMGGGIAMNFLNAGLPVVLLETKQDALDRGIATIRRNYEAQVKKGKLTQEKVEER 357
Query: 370 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 429
+ ++ L + + D+++EAV E + +K+++F +L++ ILA+NTST++L+ +
Sbjct: 358 MALIAPTLAFGDLAQADLIVEAVFEDLSVKEQVFRQLDEIAKSGAILASNTSTLNLDTIA 417
Query: 430 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 489
T +IG HFFSPA+VM LLE+VR +T V+ +M + K I+K VV G C GF
Sbjct: 418 SFTKRPGDVIGMHFFSPANVMKLLEVVRGAKTEKDVLATVMQLAKKIRKTAVVSGVCDGF 477
Query: 490 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDK 549
NR Y + A ++ G +ID AI +FG +GPF++ DLAG + A K +
Sbjct: 478 IGNRMIEQYIRQALFMLEEGALPAQIDRAIENFGFAMGPFRMSDLAGNDIGWAIRKRRYR 537
Query: 550 AFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLP--IIEECRRLSNIM 607
P+ + S + D L + GR G+ G G Y Y+ G + LP ++++ +
Sbjct: 538 EQPELHY-SRVADRLCEMGRFGQKTGAGWYDYQPGKR-----DALPSNVVDDMIVAYSKE 591
Query: 608 PGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFW 667
G + + ++EIVE ++ +VNE ++LEEGI +ASD+D + G FP +RGG + +
Sbjct: 592 RGVERRKIRDEEIVERLVLSLVNEGAKILEEGIAGKASDIDMVYLTGYGFPLWRGGPMLY 651
Query: 668 ADAVGANYVYTSLKKWS-QLYGNFFKPSRFLEERA 701
AD +G V +++K++ Q G ++P+ + E A
Sbjct: 652 ADTIGLYNVERAMRKYAKQANGYAWQPAARVTELA 686
>gi|333916713|ref|YP_004490445.1| 3-hydroxybutyryl-CoA epimerase [Delftia sp. Cs1-4]
gi|333746913|gb|AEF92090.1| 3-hydroxybutyryl-CoA epimerase [Delftia sp. Cs1-4]
Length = 705
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 249/702 (35%), Positives = 383/702 (54%), Gaps = 30/702 (4%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+ V ++++ NPPVNAL + AGL E+A S VKA+++ G G F G DI F
Sbjct: 15 DGAVLVVSINNPPVNALGQAVRAGLLAAVEQAESDAAVKAVLIVGEGKAFIAGADIREFG 74
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K MP S+ V+N +E K +VAA+ G ALGGGLE+AM H R+A P +L
Sbjct: 75 K-------PAMPP-SLPEVLNRLEASDKIVVAAIHGPALGGGLEVAMSAHYRLALPAAKL 126
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVV-----TS 183
GLPE+ LG++PG TQR PRL+G+ A ++ML K ++++ GL+D +V T+
Sbjct: 127 GLPEVNLGLLPGAGGTQRAPRLMGVKAAADLMLSGKHLSAKAALAAGLVDKLVDGTDATA 186
Query: 184 EELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQA 243
L+ + L A + A RR R + DK +L+E LA AKK+ +
Sbjct: 187 AGLVYANELLASNTAPRR---TRDIEIADKAAALAEL---DALAAETAKKSR-GLFSPLK 239
Query: 244 CLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPR 303
++ + + G+ KE +F E + GL+H FFA+R T+K+P PR
Sbjct: 240 IVECVRAAVELPFDEGIAKERALFVECLNSPQRAGLIHAFFAERETAKIPEAK--AAAPR 297
Query: 304 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQ 363
K+AVIGGG MG+GI + + + V + E ++E + +G +E GL+ +G++T+
Sbjct: 298 HFAKIAVIGGGTMGAGITVSALDAGLTVTMIERDAESIARGQANVEKVYNGLIAKGRMTE 357
Query: 364 DKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI 423
+ + Y + KDVD+VIEAV E + +K+ +F EL++ C P +LATNTS +
Sbjct: 358 EAKAAVMARYTPSTSYDDIKDVDLVIEAVFEDLEVKKAVFKELDRVCKPGAVLATNTSYL 417
Query: 424 DLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVV 483
D++ + TS +IG HFFSPA++M LLEIV + + V+ + K +KKVPV
Sbjct: 418 DIDAIAAATSRPQDVIGLHFFSPANIMKLLEIVVPAKVAPDVVTTAFELAKRMKKVPVRA 477
Query: 484 GNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAAT 543
G C GF NR Y Q+A ++ G + ID A+R FG P+GPFQ+ DLAG + AT
Sbjct: 478 GVCDGFIGNRILAVYKQAADYIMEDGASPYEIDEAVRGFGYPMGPFQVTDLAGGDIGWAT 537
Query: 544 SKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRR 602
K ++ + D + + G G+ G+G Y Y +G++ +PDP VL I++ R
Sbjct: 538 RKRRAATRDPKARYVEVADRVCERGWFGQKTGRGFYLYPQGARVGQPDPEVLAIVDAERA 597
Query: 603 LSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRG 662
+ P T +EI+ + +VNE +V+EEGI +R D+D + G FP +RG
Sbjct: 598 KKGVTPR----KFTPEEIMRRYMAAMVNEGAKVVEEGIALRPLDVDVTFLSGYGFPRFRG 653
Query: 663 GIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
G + WAD G + V ++++++ F+KP+ LE+ +G
Sbjct: 654 GPMKWADMQGLDKVLADIREFAKEDALFWKPAPLLEKLVAEG 695
>gi|241763979|ref|ZP_04762020.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Acidovorax delafieldii
2AN]
gi|241366730|gb|EER61182.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Acidovorax delafieldii
2AN]
Length = 705
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 241/708 (34%), Positives = 376/708 (53%), Gaps = 21/708 (2%)
Query: 2 AAPRVTMEVGNDG-VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR 60
A P + +G + ++T+ NPPVNAL + + GL A + D + ++L G G
Sbjct: 4 ATPATVVTTAREGAILVVTVDNPPVNALGVAVRQGLAAAMAAAQADDGIAGVLLVGAGKA 63
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
F G DI F G ++ P S+ V IEDC KP++A + G ALGGGLE+AM
Sbjct: 64 FIAGADIREF------GKPAMSP--SLPEVCRSIEDCTKPVIAVLHGAALGGGLEVAMSA 115
Query: 121 HARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 177
H R+A P LGLPE+ LG++PG TQR PRL+G+ A E+ML K + ++ + GL+
Sbjct: 116 HYRLALPAASLGLPEVNLGLLPGSGGTQRAPRLMGVKAATELMLSGKHLGAKAALQAGLV 175
Query: 178 DAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 237
D +V S + +A ++ A++ P R+ R + + S A L+ R K
Sbjct: 176 DRLVESGTPVAAGLAYANELLAQKAPVRRT--RDIAIANPSGALADLEALRADTAKKTRG 233
Query: 238 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 297
+ ++ ++ + G+ +E +F E + GL+H FFA+R T+K+P
Sbjct: 234 LFSPLKIIECVQAAVQLTFDEGLARERALFLECLDSPQRAGLIHAFFAERETAKIPEAQ- 292
Query: 298 IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 357
+PR + +A+IGGG MG+GI + + V + E ++E + +G K +E GL+
Sbjct: 293 -AAQPRAFKTLAIIGGGTMGAGITVSALDAGFTVTMIERDAESIARGQKNVEKVYDGLIA 351
Query: 358 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 417
+G++T++ + Y E DVD+VIEAV E + +K+ +F EL++ C +LA
Sbjct: 352 KGRMTEEGKAATMARYTPSTSYDEIADVDLVIEAVFEDLEVKKAVFKELDRVCKKGAVLA 411
Query: 418 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 477
TNTS +D++ + TS +IG HFFSPA++M LLEIV + SA V+ + K +K
Sbjct: 412 TNTSYLDIDAIAAATSRPQDVIGLHFFSPANIMKLLEIVVPAKVSADVVATAFELAKKLK 471
Query: 478 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGY 537
KVPV G C GF NR Y Q+A L+ G + ID A+R FG +GPFQ+ DLAG
Sbjct: 472 KVPVRAGVCDGFIGNRILAVYKQAADYLMEDGASPYEIDEAVRGFGFAMGPFQVTDLAGG 531
Query: 538 GVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPI 596
+ AT K ++ + D + + G G+ G+G Y Y +G++ +PDP VL I
Sbjct: 532 DIGWATRKRRAATRDPKARYVEVADRICERGWFGQKTGRGFYLYPQGARVGQPDPEVLAI 591
Query: 597 IEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMS 656
++ R + P T +EI+ + +VNE +V+EEGI +R D+D + G
Sbjct: 592 VDAERAKKGVT----PRQFTPEEIMRRYMAAMVNEGAKVVEEGIALRPLDVDVTFLSGYG 647
Query: 657 FPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
FP +RGG + WAD G V ++ + + F+KP+ L + +G
Sbjct: 648 FPRFRGGPMKWADMQGLPQVLADIQAFEKEDLLFWKPAPLLVKLVAEG 695
>gi|221066315|ref|ZP_03542420.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Comamonas testosteroni
KF-1]
gi|220711338|gb|EED66706.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Comamonas testosteroni
KF-1]
Length = 699
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 256/718 (35%), Positives = 395/718 (55%), Gaps = 34/718 (4%)
Query: 6 VTMEVGNDG-VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGG 64
+T E DG +A+ITL NPPVN L + G+ + +A + VKAIV+TG G FSGG
Sbjct: 1 MTAEYKVDGAIAVITLNNPPVNGLGLATRRGVVEGLRQALADKAVKAIVITGAGKAFSGG 60
Query: 65 FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
DI F K + L+ V+ ++ KP++AA+ + +GGGLELA+GCH RI
Sbjct: 61 ADITEFGKEDAYREPHLIS------VIQQLDLSTKPVIAAIHSVCMGGGLELALGCHYRI 114
Query: 125 AAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSE-----EGWKLGL 176
AAP T + LPE+ LG++PG TQRLPR++G+ A+ M++ +++ SE G KL
Sbjct: 115 AAPGTSVALPEVKLGLLPGAGGTQRLPRVLGVEAALNMIVSGEAVMSEMLAMLPGQKL-F 173
Query: 177 IDAVVTSEELLKVSRLWALDIA-ARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTA 235
++E LL ++ AL++A AR P +R L G + A + +
Sbjct: 174 NKMSASAETLLAEAKALALEVADARPLPRVRDLSCKHPQGE-----AYFEFAATMVQGMS 228
Query: 236 PNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV 295
N P CL+ ++ G++ E + F +L+M SR L H+F A+RA SK+P+V
Sbjct: 229 KNFPAPLRCLEAVKNATTKKFDDGMMAEREAFMQLMMTPESRSLRHLFMAERAASKIPDV 288
Query: 296 TDIGLKP-RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRG 354
G P R +R V VIG G MG GI+ + I V + E E L +G+ TI N
Sbjct: 289 P--GDTPVREIRTVGVIGAGTMGGGISMNFLNAGIPVTILETKQEALDRGVATIRKNYEA 346
Query: 355 LVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHC 414
V +GKL++ K + +L L+Y + K+ D++IEAV E + +K+++F +L++ P
Sbjct: 347 QVRKGKLSEQKYEQRMSLLSTTLNYGDLKNADLIIEAVFEELGVKEQVFKQLDEVARPGA 406
Query: 415 ILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGK 474
ILA+NTST+D++ + T ++G HFFSPA+VM LLE+VR + T+ V+ +M V K
Sbjct: 407 ILASNTSTLDVDKIAAFTKRPQDVVGMHFFSPANVMKLLEVVRGKATAKDVLATVMKVAK 466
Query: 475 IIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDL 534
IKK VV G C GF NR YS+ A L+ G ++D AI FG +GPF++ DL
Sbjct: 467 KIKKTAVVSGVCDGFIGNRMIEQYSRQAGFLLDEGASPQQVDKAIEKFGFAMGPFRMGDL 526
Query: 535 AGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSV 593
AG + A K PD + S D L + GR G+ G G Y Y G++ P V
Sbjct: 527 AGNDIGWAIRKRRHVEQPDMKY-SASADRLCELGRFGQKTGAGWYDYVPGNRDAIPSEVV 585
Query: 594 LPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVL 653
+I+E R+ + P ++++EIV+ +++ +VNE ++LE+GI ++ D+D +
Sbjct: 586 AKMIDEHRKSLGLT----PRKISDEEIVQRLVYALVNEGAQILEDGIASKSGDIDMVYLT 641
Query: 654 GMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN---FFKPSRFLEERATKGIPLS 708
G FP +RGG + +A VG V ++ +++Q + F++P+ L + A +G S
Sbjct: 642 GYGFPLWRGGPMHYAGEVGLFNVVQAMGRFAQNPNDDAKFWQPAPLLAKLAAEGKQFS 699
>gi|374333398|ref|YP_005083582.1| fatty oxidation complex subunit alpha [Pseudovibrio sp. FO-BEG1]
gi|359346186|gb|AEV39560.1| fatty oxidation complex, alpha subunit [Pseudovibrio sp. FO-BEG1]
Length = 717
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 244/705 (34%), Positives = 381/705 (54%), Gaps = 24/705 (3%)
Query: 5 RVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGG 64
+V+ E+ D VA++T+ N PVNAL++ I L + ++ + KA V+ G F G
Sbjct: 10 QVSYELRGD-VAVMTVSNAPVNALSLAIRQDLVARIKQFEEDEAAKAAVIVGEDKVFIAG 68
Query: 65 FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
DI F++ +PDV ++ IE C KP++AA+ G+ALGGGLE+A+GCH R+
Sbjct: 69 ADIREFKR---PATEPHLPDV-----IDSIEACSKPVIAAIHGVALGGGLEVALGCHFRV 120
Query: 125 AAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVV 181
++GLPE+ LG+IPG TQRLPRL G KA+EM+ I ++ G++D V
Sbjct: 121 GVKGAKVGLPEVHLGIIPGAGGTQRLPRLAGYEKALEMIPSGAPIGADAAKSAGILDGVS 180
Query: 182 TSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 241
+ + +A + P L R +L + + +V A+ K A
Sbjct: 181 DEADAVAAGLAFARSVIDNGTP----LRRCSELVAPAVDAQVFVDAKAAVAKRARGQKSP 236
Query: 242 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 301
C++ IE G+ KE ++F EL R L H FFA RA K+P + G+
Sbjct: 237 VVCVEAIEVASQTSFVDGMAKEREMFMELKNSAQHRALSHAFFADRALGKLPEIE--GIA 294
Query: 302 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 361
PR ++ + VIGGG MG+GIAT ++N + V L E + + L + TI NV G V +GKL
Sbjct: 295 PRMLKSIGVIGGGTMGAGIATGALMNGLSVTLIERDDDALGRAKATIAKNVGGAVKKGKL 354
Query: 362 TQDKANNAL-KMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 420
+ D+ + L DY+ ++D+V+EAV E + +K+++F +L++ C +LATNT
Sbjct: 355 SADQEQRIFAEALSLSTDYASLSELDLVVEAVFEDIDVKKQVFEKLDEVCKEGAVLATNT 414
Query: 421 STIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVP 480
S +D+N + T +IG HFFSPAH+M LLE+V ++T+ VI +GKI++KV
Sbjct: 415 SYLDVNAIAAVTKRPQDVIGLHFFSPAHIMKLLEVVVADKTAPDVIATGFLLGKIMRKVA 474
Query: 481 VVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVA 540
V G C GF NR Y +A +V G F +D + FG P+GP+ + DLAG +
Sbjct: 475 VRAGVCDGFIGNRILATYRAAADAIVVDGSTPFEVDEVMLEFGFPMGPYAVADLAGLDIG 534
Query: 541 AATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGS-KPKPDPSVLPIIEE 599
AT K R D + + G G+ KG Y YE G+ K P+P+VL I+ E
Sbjct: 535 WATRKHKAPTRDPRERYFTFADRMCEQGWFGQKTSKGYYVYEDGARKGTPNPAVLDILTE 594
Query: 600 CRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPS 659
R+ I +T+ +I++ + +VNE+ +V+E+GI +R D+D + G FP
Sbjct: 595 ERKEKRI----NAKKLTKTQILDRYMAAMVNEAAKVVEDGIALRPLDVDMTLIYGYGFPR 650
Query: 660 YRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+RGG + +AD +G + +++K +++ F++P++ LEE G
Sbjct: 651 WRGGPMQYADEIGLEKILSNIKAYAEEDAYFWQPAKLLEELVASG 695
>gi|299533351|ref|ZP_07046734.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein [Comamonas
testosteroni S44]
gi|298718667|gb|EFI59641.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein [Comamonas
testosteroni S44]
Length = 699
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 252/717 (35%), Positives = 387/717 (53%), Gaps = 32/717 (4%)
Query: 6 VTMEVGNDG-VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGG 64
+T E DG +A+ITL NPPVN L + G+ + +A + D VKAIV+TG G FSGG
Sbjct: 1 MTAEYKVDGAIAVITLNNPPVNGLGLATRRGVVEGLRQALADDAVKAIVITGAGKAFSGG 60
Query: 65 FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
DI F K + L+ V+ ++ KP++AA+ + +GGGLELA+GCH RI
Sbjct: 61 ADITEFGKEDAYREPHLIS------VIQQLDLSTKPVIAAIHSVCMGGGLELALGCHYRI 114
Query: 125 AAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSE-----EGWKLGL 176
AAP T + LPE+ LG++PG TQRLPR++G+ A+ M++ +++ SE G KL
Sbjct: 115 AAPGTAVALPEVKLGLLPGAGGTQRLPRVLGVEAALNMIVSGETVMSEMLAMLPGQKL-- 172
Query: 177 IDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAP 236
+ + S E L A +P R + K + + A + +
Sbjct: 173 FNKMSASAETLLAEAKALALEVADVRPLPRVRDLSCKH---PQGEAYFEFAATMVQGMSK 229
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P CL+ ++ G++ E + F +L+M SR L H+F A+RA SK+P+V
Sbjct: 230 NFPAPLRCLEAVKNATTKKFDDGMVAERETFMQLMMTPESRSLRHLFMAERAASKIPDVP 289
Query: 297 DIGLKP-RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGL 355
G P R +R V VIG G MG GI+ + I V + E E L +G+ TI N
Sbjct: 290 --GDTPVREIRTVGVIGAGTMGGGISMNFLNAGIPVTILETKQEALDRGVATIRKNYEAQ 347
Query: 356 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCI 415
V +GKL++ K + +L L+Y + K+ D++IEAV E + +K+++F +L++ P I
Sbjct: 348 VKKGKLSEQKYEQRMSLLSTTLNYGDLKNADLIIEAVFEELGVKEQVFKQLDEVAKPGAI 407
Query: 416 LATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKI 475
LA+NTST+D++ + T ++G HFFSPA+VM LLE+VR + T+ V+ +M VGK
Sbjct: 408 LASNTSTLDVDKIAAFTKRPQDVVGMHFFSPANVMKLLEVVRGKATAKDVLATVMKVGKK 467
Query: 476 IKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLA 535
IKK VV G C GF NR YS+ A L+ G ++D AI FG +GPF++ DLA
Sbjct: 468 IKKTAVVSGVCDGFIGNRMIEQYSRQAGFLLDEGASPQQVDKAIEKFGFAMGPFRMGDLA 527
Query: 536 GYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVL 594
G + A K PD + S D L + GR G+ G G Y Y G + P V
Sbjct: 528 GNDIGWAIRKRRYVEKPDMKY-SASADRLCELGRFGQKTGAGWYDYVPGKRDAIPSEVVA 586
Query: 595 PIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLG 654
+I+E R+ I P ++++EIV+ +++ + NE +LE+GI ++ D+D + G
Sbjct: 587 KMIDEHRKSLGIT----PRKISDEEIVQRLVYALANEGAHILEDGIASKSGDIDMVYLTG 642
Query: 655 MSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN---FFKPSRFLEERATKGIPLS 708
FP +RGG + +A VG V ++ ++++ + F++P+ L + A +G S
Sbjct: 643 YGFPLWRGGPMHYAGEVGLFNVVQAMGRFAKNPNDDAKFWQPAPLLAKLAAEGKQFS 699
>gi|410623226|ref|ZP_11334043.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola pallidula DSM 14239 =
ACAM 615]
gi|410157148|dbj|GAC29417.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola pallidula DSM 14239 =
ACAM 615]
Length = 707
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 258/709 (36%), Positives = 387/709 (54%), Gaps = 36/709 (5%)
Query: 10 VGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINV 69
V + +A++ L + PVNAL+ + G+ + E+A S D VKAIVL + FS G DI+
Sbjct: 14 VQDQHLALVGLNSAPVNALSKAVRVGIIESVEKALSDDKVKAIVLHSHLPLFSAGADISE 73
Query: 70 FQKVHGAGDVS-LMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPK 128
F GD+S ++P+V + +IE KP++A V G A GGGLELA+ CH RI K
Sbjct: 74 FS----GGDLSPMLPEV-----LEVIEQSTKPVIAIVGGNAFGGGLELALSCHYRITHAK 124
Query: 129 TQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLL-SKSITSEEGWKLGLIDAVVTSE 184
++GLPE+ LG++PG TQRLPRL A++M++ + + + G LI V T++
Sbjct: 125 NKVGLPEVHLGILPGAGGTQRLPRLTDPKTALDMIVSGAPTPVTALGNVFDLI--VDTAD 182
Query: 185 ELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 244
EL + +A ++ + P R ++ S E + AK P C
Sbjct: 183 ELQSAAMSFANEVVEKLMPVKRVCDIDLEMSSDIETLFAQYSQGVAAKSKGFFAPGQ--C 240
Query: 245 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRG 304
+ ++ H +G+ +EA++F E + +R H FFA+RA S V ++ +K R
Sbjct: 241 VLAVKAAFTHDFKAGLAREAELFMECMTTSQARAQQHFFFAERAASHVQGISR-DVKARD 299
Query: 305 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 364
+++ AVIG G MG GIA I V++ E+ L KG+ I N +GKLT +
Sbjct: 300 IKQAAVIGAGTMGGGIAMNFANAGIPVIMLELQQAALDKGLALIRRNYENSAKKGKLTSE 359
Query: 365 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 424
+ + +L G Y++ D D+VIEAV E + +K+++FS L+K C P ILA+NTST+D
Sbjct: 360 QVEQRMLLLTGTTSYADLSDADLVIEAVFEKMSVKKEVFSMLDKVCKPGAILASNTSTLD 419
Query: 425 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 484
LN + S +IG HFFSPA+VM LLEIVR E+TS +VI M + K I+KV V+VG
Sbjct: 420 LNEIAASISRPQDVIGLHFFSPANVMKLLEIVRGEKTSDEVIKTAMKLAKTIRKVGVLVG 479
Query: 485 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAA--- 541
C GF NR PY + A L+ G ++D I FGLP+GPF + D+AG +
Sbjct: 480 VCFGFVGNRMIEPYGREANRLMLEGATPEQVDRVIGKFGLPMGPFTMGDMAGLDIGYFVR 539
Query: 542 ATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPII-EE 599
+ +EF P + D L+ GR G GKG Y YE GS+ P PDP V+ + +E
Sbjct: 540 ESRREFIAHDPSYCI---VADKLVAQGRVGLKVGKGAYLYEHGSRHPIPDPDVIEMAKQE 596
Query: 600 CRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPS 659
+RL G + ++++EI+E ++P++NE +L+EGI ++SD+D V G FP
Sbjct: 597 AKRL-----GIEQREISDQEILERCIYPLINEGADILKEGIAAKSSDIDVIYVYGYGFPV 651
Query: 660 YRGGIVFWADAVGANYVYTSLKKWSQLYGNF----FKPSRFLEERATKG 704
+RGG + +AD +G + + + + G + F PS L E A G
Sbjct: 652 FRGGPMQFADEIGLKQIRERMNHYKETLGEYGQHWFTPSPLLNELADAG 700
>gi|254510901|ref|ZP_05122968.1| peroxisomal bifunctional enzyme [Rhodobacteraceae bacterium KLH11]
gi|221534612|gb|EEE37600.1| peroxisomal bifunctional enzyme [Rhodobacteraceae bacterium KLH11]
Length = 697
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 250/699 (35%), Positives = 381/699 (54%), Gaps = 29/699 (4%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
D +A+++ NPPVNAL + + GL E A + D +A+++ G G + G DI F K
Sbjct: 11 DDIAVLSARNPPVNALGVDVRRGLLSGIERAEA-DGARAVLIYGEGRTYFAGADIREFGK 69
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + + N IE +V+A+ G ALGGGLE+A+ CH RIA P ++G
Sbjct: 70 PP--------QEPGLPALCNRIEASPLLVVSALHGTALGGGLEVALSCHYRIAVPSAKVG 121
Query: 133 LPELTLGVIP---GTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE-ELLK 188
LPE+ LG+IP GTQRLPR++G+ A++M+ + + + E ++G++D + + +
Sbjct: 122 LPEVNLGIIPGAGGTQRLPRIIGVEAALDMITTGRHVRAAEALEMGVLDKIGEGDPREVG 181
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 248
++ AL A + I + + + + VLK R Q AC
Sbjct: 182 LAYTRALLAANTPRRPICEMPTPEPIDFDARYEAVLKKGRGQLSPAVAVRAVQAACE--- 238
Query: 249 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 308
SG+++E ++F EL+ D +GL+H FFA+RA SK+P + G+ PR + ++
Sbjct: 239 ----ADDFASGLVRERELFTELMASDQRKGLIHAFFAERAVSKLPELQ--GVVPRDLHQI 292
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
VIGGG MG+GIAT+ +L + VVL E+ E I +N+ G V RGKL+Q ++
Sbjct: 293 GVIGGGTMGAGIATSALLAGLPVVLLEMTPEAAKAAQARIASNLAGAVKRGKLSQSDHDD 352
Query: 369 ALK-MLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 427
L+ L+ LDY ++VD+VIEAV E + +K+++F++L+ C +LATNTS +D+N
Sbjct: 353 ILQNRLELALDYDALQNVDLVIEAVFEDMEVKKQVFAQLDAVCKGGAVLATNTSYLDINE 412
Query: 428 VGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 487
+ T D +IG HFFSPAHVM LLE+V +RT+ +V+ +GK + K V G C
Sbjct: 413 IAALTRRPDDVIGLHFFSPAHVMKLLEVVVADRTAPEVVATGFALGKRLGKTAVRAGVCD 472
Query: 488 GFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEF 547
GF NR Y A +V G ++ID+A+ +FG +GPF + DLAG + A K
Sbjct: 473 GFIGNRILSAYRTCADHMVLDGASPYQIDAALTAFGFAMGPFAVSDLAGLDIGWAARKRK 532
Query: 548 DKAFPD-RSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVLPIIEECRRLSN 605
A D R+ S D L + G G+ GKG Y YE G + P+P V+P+IE R
Sbjct: 533 RAAGLDPRARDSFYADKLCEGGYFGQKTGKGYYVYETGRRGGVPNPEVMPLIEAERAAQG 592
Query: 606 IMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIV 665
I G T+ EIV + +VNE+ RV+ EGI R D+D + G FP Y GG +
Sbjct: 593 ISARG----FTDDEIVRRYMVAMVNEAARVIGEGIARRPLDVDVTLIYGYGFPRYWGGPL 648
Query: 666 FWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
WAD G + +++WS+ F++P+ LE+ +G
Sbjct: 649 KWADLQGLPNLLDDIRRWSEEDPYFWQPAPLLEQLVAEG 687
>gi|118094872|ref|XP_422690.2| PREDICTED: peroxisomal bifunctional enzyme [Gallus gallus]
Length = 726
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 275/725 (37%), Positives = 394/725 (54%), Gaps = 50/725 (6%)
Query: 11 GNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVF 70
G VA+I L NPPVNAL++ ++ L+D + A + VKA+ + G G+FS G DI F
Sbjct: 7 GAAAVAVIRLRNPPVNALSLTVLQALEDGLKRADADPSVKAVTICGENGKFSAGADIRGF 66
Query: 71 QKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQ 130
G + L P +V+LIE +KP+VAA+EG+ALGGGLE+A+GCH RIA + +
Sbjct: 67 SSPKKQG-LGLGP------IVSLIERSEKPVVAAIEGIALGGGLEVALGCHYRIAHVQAR 119
Query: 131 LGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVV---TSE 184
+GLPE+T+G++PG TQRLPRLVG+ A++++ + I + E KLGL+D VV T E
Sbjct: 120 MGLPEVTIGLLPGAEGTQRLPRLVGVPAALDIITTGRHIPATEALKLGLVDEVVEENTVE 179
Query: 185 ELLKVS-RLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQA 243
++++ +L + RR SL +L ++ L A ++ KK A +
Sbjct: 180 AAIRLANKLIGQPLGHRR----LSLKPVPRLPNMEA---FLSEALVKVKKRAQGCLAPEL 232
Query: 244 CLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK-- 301
C I+ GV KE ++F L+ ++ L + FFA+RA K + K
Sbjct: 233 CFQAIKAATEQPFADGVRKERELFNILLTSGQAKALQYAFFAERAVEKWTTPSGASWKSA 292
Query: 302 -PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTI----EANVRGLV 356
P+ +RK AVIG G MG GI T+ + I VV E N EYL G K + E +
Sbjct: 293 SPQPIRKAAVIGLGTMGRGIVTSLVKAKIPVVALEQNLEYLNTGRKAVMLLLEREAMKM- 351
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
+G T D N A L+ +D+ +DVD+VIEAV E++ LK++IFS+L + C P L
Sbjct: 352 EQGAQTLDFHNPA--QLQFTVDFDVLRDVDLVIEAVFENMALKKEIFSKLSRICKPEAFL 409
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
TNTS ++++ + T ++IG HFFSPAHVM LLEI+ TS I + + K++
Sbjct: 410 CTNTSALNIDDIASVTGRPQQVIGTHFFSPAHVMRLLEIIYGRHTSPNTIATAIQLAKVM 469
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
KKV VVVGNC GF NR FPY Q A L+ G +D + FG IGPF++ DLAG
Sbjct: 470 KKVGVVVGNCFGFVGNRMMFPYVQQAVFLLEEGSRPEDVDQVLEDFGFKIGPFRMSDLAG 529
Query: 537 YGVAAATSKE-------FDKAFPDRSFQ----SPLVDLLLKSGRNGKANGKGLYTYEK-- 583
V + K+ P R SPL DLL + GR G+ GKG Y YEK
Sbjct: 530 LDVGWRSRKDQGLTGPSLAPGTPVRQRHGYRYSPLPDLLCEKGRFGQKTGKGWYQYEKAG 589
Query: 584 GSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVR 643
G KPDP + + E R I K + ++EI+E LF ++NE +L EGI
Sbjct: 590 GRTAKPDPWIHSFLREYRDTHQI----KTRFIDQEEILERCLFTLINEGFDILAEGIASG 645
Query: 644 ASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF--FKPSRFLEERA 701
LD + G +P +RGG +F+A VG + T L+K+S+++ + +PS FL++
Sbjct: 646 PEHLDVVYINGYGWPKHRGGPMFYASIVGLPNILTKLQKYSEIHPDVPQLRPSAFLKKLV 705
Query: 702 TKGIP 706
G P
Sbjct: 706 AVGNP 710
>gi|264679089|ref|YP_003278996.1| 3-hydroxyacyl-CoA dehydrogenase [Comamonas testosteroni CNB-2]
gi|262209602|gb|ACY33700.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein [Comamonas
testosteroni CNB-2]
Length = 699
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 257/718 (35%), Positives = 394/718 (54%), Gaps = 34/718 (4%)
Query: 6 VTMEVGNDG-VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGG 64
+T E DG +A+ITL NPPVN L + G+ + +A + D VKAIV+TG G FSGG
Sbjct: 1 MTAEYKVDGAIAVITLNNPPVNGLGLATRRGVVEGLRQALADDAVKAIVITGAGKAFSGG 60
Query: 65 FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
DI F K + L+ V+ ++ KP++AA+ + +GGGLELA+GCH RI
Sbjct: 61 ADITEFGKEDAYREPHLIS------VIQQLDLSTKPVIAAIHSVCMGGGLELALGCHYRI 114
Query: 125 AAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSE-----EGWKLGL 176
AAP T + LPE+ LG++PG TQRLPR++G+ A+ M++ +++ SE G KL
Sbjct: 115 AAPGTAVALPEVKLGLLPGAGGTQRLPRVLGVEAALNMIVSGETVMSEMLAMLPGQKL-F 173
Query: 177 IDAVVTSEELLKVSRLWALDIA-ARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTA 235
++E LL ++ AL++A R P +R L G + A + +
Sbjct: 174 SKMSASAETLLAEAKALALEVADVRPLPRVRDLSCKHPQGE-----AYFEFAATMVQGMS 228
Query: 236 PNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV 295
N P CL+ ++ G++ E + F +L+M SR L H+F A+RA SK+P+V
Sbjct: 229 KNFPAPLRCLEAVKNATTKKFDDGMVAEREAFMQLMMTPESRSLRHLFMAERAASKIPDV 288
Query: 296 TDIGLKP-RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRG 354
G P R + V VIG G MG GI+ + I V + E E L +G+ TI N
Sbjct: 289 P--GDTPVREIWTVGVIGAGTMGGGISMNFLNAGIPVTILETKQEALDRGVATIRKNYEA 346
Query: 355 LVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHC 414
V +GKL++ K + +L L+Y + K+ D++IEAV E + +K+++F +L++ P
Sbjct: 347 QVKKGKLSEQKYEQRMALLSTTLNYGDLKNADLIIEAVFEELGVKEQVFKQLDEVAKPGA 406
Query: 415 ILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGK 474
ILA+NTST+D++ + T ++G HFFSPA+VM LLE+VR + T+ V+ +M VGK
Sbjct: 407 ILASNTSTLDVDKIAAFTKRPQDVVGMHFFSPANVMKLLEVVRGKATAKDVLATVMKVGK 466
Query: 475 IIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDL 534
IKK VV G C GF NR YS+ A L+ G ++D AI FG +GPF++ DL
Sbjct: 467 KIKKTAVVSGVCDGFIGNRMIEQYSRQAGFLLDEGASPQQVDKAIEKFGFAMGPFRMGDL 526
Query: 535 AGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSV 593
AG + A K PD + S D L + GR G+ G G Y Y G + P V
Sbjct: 527 AGNDIGWAIRKRRYIEKPDMKY-SASADRLCELGRFGQKTGAGWYDYVPGKRDAIPSEVV 585
Query: 594 LPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVL 653
+I+E R+ I P ++++EIV+ +++ +VNE ++LE+GI ++ D+D +
Sbjct: 586 AKMIDEHRKSLGIT----PRKISDEEIVQRLVYALVNEGAQILEDGIASKSGDIDMVYLT 641
Query: 654 GMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN---FFKPSRFLEERATKGIPLS 708
G FP +RGG + +A VG V ++ +++Q + F++P+ L + A +G S
Sbjct: 642 GYGFPLWRGGPMHYAGEVGLFNVVQAMGRFAQNPNDDAKFWQPAPLLAKLAAEGKQFS 699
>gi|222112189|ref|YP_002554453.1| 3-hydroxyacyl-CoA dehydrogenase [Acidovorax ebreus TPSY]
gi|221731633|gb|ACM34453.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Acidovorax ebreus
TPSY]
Length = 705
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 242/696 (34%), Positives = 372/696 (53%), Gaps = 24/696 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
V ++++ NPPVNAL + AGL E+A V+A+++ G G F G DI F K
Sbjct: 18 VLVVSINNPPVNALGQAVRAGLLAAVEQAEGDAAVRALLIVGEGKAFIAGADIREFGK-- 75
Query: 75 GAGDVSLMPDV--SVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
P V S+ V N +E C K +VAA+ G ALGGGLE+A+ H R+A P LG
Sbjct: 76 --------PPVPPSLPEVCNRLESCGKLVVAAIHGAALGGGLEVALSAHYRLALPAASLG 127
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 189
LPE+ LG++PG TQR PRL+G+ A E+ML K ++++ GL+D +V + +
Sbjct: 128 LPEVNLGLLPGAGGTQRAPRLMGVKAAAELMLSGKHLSAKAAAAAGLVDRLVEGTDPVAA 187
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
+A ++ A+ R+ R K+ + AR L L+ K + ++ +
Sbjct: 188 GLAYANELLAQGAQPRRT--RDLKIADQAAARAELDALALETAKKTRGLFSPGKIVECVR 245
Query: 250 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 309
+ G+ KE +F E + +GLVH FFA+R T+K+P PR K+A
Sbjct: 246 AAVELPFDEGIAKERALFVECLNSPQRQGLVHAFFAERETAKIPEAQ--AAAPRHFAKIA 303
Query: 310 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 369
+IGGG MG+GI + + + V + E ++E + +G K +E GL+ +G++T +
Sbjct: 304 IIGGGTMGAGITVSALDAGLTVTMIERDAESIARGQKNVEKVYDGLIAKGRMTAEGKAAI 363
Query: 370 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 429
L Y + DVD+VIEAV E + +K+ +F EL++ C P +LATNTS +D++ +
Sbjct: 364 LARYTPSTRYDDIADVDLVIEAVFEDLEVKKAVFKELDRVCKPGAVLATNTSYLDIDAIA 423
Query: 430 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 489
TS +IG HFFSPA++M LLEIV + + V+ + K +KKVPV G C GF
Sbjct: 424 AATSRPQDVIGLHFFSPANIMKLLEIVVPAKVAPDVVTTAFALAKKMKKVPVRAGVCDGF 483
Query: 490 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDK 549
NR Y Q+A L+ G + ID A+R FG +GPFQ+ DLAG + AT K
Sbjct: 484 IGNRILAVYKQAADYLMEDGASPYEIDEAVRGFGFAMGPFQVTDLAGGDIGWATRKRRAA 543
Query: 550 AFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIMP 608
++ + D + + G G+ G+G Y Y +G++ +PDP VL I++ R I
Sbjct: 544 TRDPQARYVEVADRVCERGWFGQKTGRGFYLYPQGARVGQPDPEVLAIVDAERAKKGIT- 602
Query: 609 GGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWA 668
P T EI+ + +VNE +V++EGI +R D+D + G FP +RGG + WA
Sbjct: 603 ---PRQFTADEIMRRYMAAMVNEGAKVVQEGIALRPLDVDVTFLSGYGFPRWRGGPMKWA 659
Query: 669 DAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
D G + V ++ +++ F+KP+ LE+ +G
Sbjct: 660 DMTGLDKVLADIRAFAKEDPLFWKPAPLLEQLVAEG 695
>gi|170700585|ref|ZP_02891585.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia ambifaria
IOP40-10]
gi|170134491|gb|EDT02819.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia ambifaria
IOP40-10]
Length = 693
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 255/707 (36%), Positives = 382/707 (54%), Gaps = 40/707 (5%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+D VA+ITL NPPVN L + + A + DV+AIV+TG FS G DI F
Sbjct: 8 HDDVAVITLDNPPVNGLGHATRLAIVEVMAAAAADADVRAIVITGADSGFSAGADIREF- 66
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
G + S+ V+ IE KP+VAA+ +A+GGGLELAMGCH R+ P Q+
Sbjct: 67 -----GTPKATQEPSIHTVIRAIESSAKPVVAAIHSVAMGGGLELAMGCHFRVVTPGAQI 121
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
LPE+ LGV+PG TQRLPR VGL A++M++ + + SE+ GL D ++ + L
Sbjct: 122 ALPEVKLGVLPGAGGTQRLPRAVGLEAALDMIVSGRIVRSEKLADTGLFDLIIEGDLLTG 181
Query: 189 VSRLWALDIAARRK-PWIRS--LHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACL 245
R +A A R + P +R + + G L AR + A + N P C+
Sbjct: 182 AVR-FAQQAADRNELPRLRDRRIEHVNPDGFLQFARNTIATA-------SRNFPAPFKCV 233
Query: 246 DVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP--- 302
D ++ + G+ E K+F EL+ SR L H FF +RA +K+P+ L P
Sbjct: 234 DAVQASVQQAFDDGIKFERKLFMELMDTSESRALRHAFFGKRAGAKIPD-----LPPDTP 288
Query: 303 -RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 361
R V +VAV+G G MG+GIA + + V + E + L +G+ I N +GKL
Sbjct: 289 VRTVTQVAVVGAGTMGAGIAMNFLSAGLQVTILETRQDALERGVAAIRKNYDDNARKGKL 348
Query: 362 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 421
TQ++ + +L L Y + + D++IEAV E + +K+ +F EL+ ILA+NTS
Sbjct: 349 TQEQVEQRMSLLTPTLSYDDLRHADLIIEAVFEEMSVKESVFRELDAVAKHGAILASNTS 408
Query: 422 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 481
T+D++ + T ++G HFFSPA+VM LLE+VR E+T+ V+ +M++ + I K V
Sbjct: 409 TLDVDKIAAFTKRPCDVVGMHFFSPANVMELLEVVRGEKTAHDVLATVMSLARKIGKTAV 468
Query: 482 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAA 541
V G C GF NR Y + A L+ G +ID AI FG +GPF++LDL+G +
Sbjct: 469 VSGVCDGFIGNRMINQYLRQAGYLLDEGALPEQIDRAIEKFGFAMGPFRMLDLSGNDIVW 528
Query: 542 ATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVL---PIIE 598
A K PD + S LL + GR G+ +G G Y Y+ G + K PS+ I++
Sbjct: 529 AIHKRHAVERPDIVY-SKTTHLLCEMGRFGQKSGAGWYDYKAGDR-KAYPSLAVNDMIVQ 586
Query: 599 ECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFP 658
+ R + G + +++ EIVE +++ +VNE R+LEEGI +ASD+D + G FP
Sbjct: 587 QSRDI-----GLERRVISDDEIVERLVYALVNEGARILEEGIASKASDIDVVYLTGYGFP 641
Query: 659 SYRGGIVFWADAVGANYVYTSLKKWSQLY-GNFFKPSRFLEERATKG 704
+RGG +F+AD VG V + +++ + Y G ++ + LE A G
Sbjct: 642 VFRGGPMFYADTVGLYNVAQATRRYGKGYRGEAWQTAPLLERLAEVG 688
>gi|418528630|ref|ZP_13094578.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Comamonas testosteroni
ATCC 11996]
gi|371454384|gb|EHN67388.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Comamonas testosteroni
ATCC 11996]
Length = 705
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 242/705 (34%), Positives = 378/705 (53%), Gaps = 25/705 (3%)
Query: 8 MEVGNDG-VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFD 66
+E+ DG V ++++ NPPVNAL + GL E+A + VKA+V+ G G F G D
Sbjct: 10 VELRQDGDVLLVSVNNPPVNALGAAVRQGLMAAMEQADASAAVKAVVIVGEGKAFIAGAD 69
Query: 67 INVFQK--VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
I F K V +PDV N IE C KP+VA + G ALGGGLE+AM H R+
Sbjct: 70 IREFGKPPVQ-----PFLPDV-----CNRIEACSKPVVAVIHGAALGGGLEIAMSAHYRL 119
Query: 125 AAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVV 181
A P +LGLPE++LG++PG TQR PRL+G+ A E+ML + I ++ G GL+D
Sbjct: 120 ALPGAKLGLPEVSLGLLPGAGGTQRAPRLMGVKAATELMLSGQQIGAKAGLAAGLVDKPD 179
Query: 182 TSEELLKVSRLWALDIAARRKPWIRSLHRT-DKLGSLSEAREVLKLARLQAKKTAPNMPQ 240
+ + +A ++ A+ P +R + T +L + A+ L R K + +
Sbjct: 180 DGTDPVAAGLAYARELLAQGAP-LRPVSATPGRLADKAAAQAELDALRADTAKKSRGLFS 238
Query: 241 HQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGL 300
+D ++ + G+ E F + GL+H FFA+R T+K+P
Sbjct: 239 PLKIIDCVQAALDLPFAEGLKFERTQFLACIDSPQRAGLIHAFFAERETAKIPEAR--AA 296
Query: 301 KPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGK 360
+PR K+A+IGGG MG+GI + + + V + E ++E + +G +E GL+ +G+
Sbjct: 297 QPRAFSKIAIIGGGTMGAGITVSALDAGLVVTMIERDAESIARGQANVEKVYNGLIAKGR 356
Query: 361 LTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 420
++++ L Y E DVD+VIEAV E + +K+ +F EL++ C +LATNT
Sbjct: 357 MSEEAKAAILARYTPSTRYDEIADVDLVIEAVFEDLEVKKAVFKELDRVCKSGAVLATNT 416
Query: 421 STIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVP 480
S +D++ + TS +IG HFFSPA++M LLEIV + + V+ + + +KKVP
Sbjct: 417 SYLDIDAIAAVTSRPQDVIGLHFFSPANIMKLLEIVVPAKVAPDVVTTAFELARKMKKVP 476
Query: 481 VVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVA 540
V G C GF NR Y Q+A L+ G + ID A+R FG +GPFQ+ DLAG +
Sbjct: 477 VRAGVCDGFIGNRILATYKQAADYLMEDGASPYEIDEAVRGFGFAMGPFQVTDLAGGDIG 536
Query: 541 AATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEE 599
AT K ++ + D + + G G+ G+G Y Y +G++ +PDP VL I++
Sbjct: 537 WATRKRRAATRDPKARYVEIADRICEQGWFGQKTGRGFYLYPQGARIGQPDPEVLAIVDA 596
Query: 600 CRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPS 659
R + P +P T +EI+ + +VNE +V+ EGI +R D+D + G FP
Sbjct: 597 ERAKKGVTP--RPF--TAEEIMRRYMAAMVNEGAKVVGEGIALRPLDVDVTFISGYGFPR 652
Query: 660 YRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+RGG + WAD G + V ++ +++ F+KP+ L++ +G
Sbjct: 653 HRGGPMKWADMQGLDKVLADIEAFAKEDALFWKPAPLLQKLVAEG 697
>gi|254503061|ref|ZP_05115212.1| 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain family
[Labrenzia alexandrii DFL-11]
gi|222439132|gb|EEE45811.1| 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain family
[Labrenzia alexandrii DFL-11]
Length = 699
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 247/695 (35%), Positives = 383/695 (55%), Gaps = 29/695 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A++ L NPPVNA + + G+ + +KAI L G G F G DI F K
Sbjct: 20 MALVALNNPPVNAASQALRQGIHQAVSDLQKDPGIKAIGLYGEGRTFIAGADIREFGK-- 77
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
+PD+ N +E+ + PIV + G ALGGGLE+A+ CHARIA P ++GLP
Sbjct: 78 -PPQDPWLPDL-----CNFLENSETPIVCIIHGTALGGGLEVALSCHARIAVPSAKVGLP 131
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 191
E+TLG++PG TQR PRL G++ +++M+ K +++++ + GL+DAV EE R
Sbjct: 132 EVTLGILPGAGGTQRAPRLAGVAASLDMITSGKPVSAQKALESGLVDAV---EE--GAPR 186
Query: 192 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 251
AL A S +T +L + ++ ++ ++ R + +KT P + C+D +E
Sbjct: 187 DLALKAAQALADGTLSHRKTGELDTDAD-QQAIEAYRKKLQKTQPLLFSPHRCVDAVEAS 245
Query: 252 IVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVI 311
+ G+ KE +F++ + GL+H FFA+RA SK+P + PR + K+ VI
Sbjct: 246 TLPLA-DGLKKERSLFQDCMESPQRAGLIHAFFAERAVSKIPEAKET---PRQIAKIGVI 301
Query: 312 GGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNAL- 370
GGG MGSGIATA +L V L E + L +G+ TI N+ G V RGKL DK + L
Sbjct: 302 GGGTMGSGIATACLLAGFDVTLTERDQGGLDRGLATIAKNLDGAVKRGKLAADKRDQILS 361
Query: 371 KMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGE 430
L ++ + D++IEAV E + +K+ IF+EL+K +LA+NTS +D+N +
Sbjct: 362 NNLSSAVELGALSEADLIIEAVFEEMDVKRSIFTELDKVAKQGAVLASNTSYLDINEIAA 421
Query: 431 KTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFA 490
TS +IG HFFSPAHVM LLE+V ++T+ + + K +KKV V G C GF
Sbjct: 422 VTSRPQDVIGLHFFSPAHVMRLLEVVVADKTAPDAVATGFALAKKLKKVAVRAGVCDGFI 481
Query: 491 VNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKA 550
NR Y ++A ++ G +D+A+ +FG +GP+Q+ DLAG ++ AT+K
Sbjct: 482 GNRILSFYKKAADYMMMDGASPEEVDTAMTNFGFAMGPYQVYDLAGLDISWATNKRRAAT 541
Query: 551 FPDRSFQSPLVDLLLKSGRNGKANGKGLYTY-EKGSKPKPDPSVLPIIEECRRLSNIMPG 609
P SP++D + + G G+ G+G Y Y E G++P PD L II+E R + I
Sbjct: 542 RPAEERYSPILDRICEEGWFGRKTGRGFYIYDETGARPNPD--ALKIIDEERAKAGIT-- 597
Query: 610 GKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWAD 669
P T +EIV + +++E+ RVLE+GI +R D+D + G FP +RGG + AD
Sbjct: 598 --PRKFTAEEIVSRFMTAMISEAIRVLEDGIALRPIDIDAVYLFGYGFPRFRGGPMHTAD 655
Query: 670 AVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+GA + ++ +++ +++ L + A G
Sbjct: 656 QIGAAELVKRIEAFAEEDSYYWQVPALLRQMAETG 690
>gi|365891756|ref|ZP_09430138.1| Enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Bradyrhizobium
sp. STM 3809]
gi|365332258|emb|CCE02669.1| Enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Bradyrhizobium
sp. STM 3809]
Length = 697
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 243/699 (34%), Positives = 390/699 (55%), Gaps = 29/699 (4%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D + I+T+ +PPVNAL+ + G+ D + A +KAIVLT G F G DI F
Sbjct: 10 QDIIGIVTIDSPPVNALSAAVRGGILDNVKAAIDDPAIKAIVLTCGGRTFIAGADITEF- 68
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
G +P ++ V++ IE+ KP++AA+ G ALGGGLE+A+ CH R+A ++L
Sbjct: 69 -----GKPPKLP--ALNDVLSTIENSPKPVIAAIHGTALGGGLEVALACHYRVATKDSKL 121
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
GLPE+ LG++PG TQRLPR VG A++M++ I++ E K GLI+ +V
Sbjct: 122 GLPEVKLGLLPGAGGTQRLPRAVGPELAVKMIVGGDPISAAEAHKAGLIEEIVEGPASGG 181
Query: 189 VSRLWALDIAARRKPWIRSLHRTD-KLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDV 247
V +A + A +P +R L D K+ + R + A K + + A D
Sbjct: 182 VE--FARKVVAENRP-LRKLRDDDSKIAAAKADRSIFTNAVAAITKKSRGLEAPFAAADA 238
Query: 248 IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRK 307
+ I G+ +E + F +L+ D S+ + FFA+R +K+ V + G K R V +
Sbjct: 239 VGYAIDLPFDEGLKREREGFLKLLTSDQSKAQRYAFFAEREAAKIAGVPE-GTKGRKVER 297
Query: 308 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 367
VA+IG G MG GIA + I V L E E L +G+ ++ N RG + D
Sbjct: 298 VAIIGAGTMGGGIAMSFANAGIPVTLIETAEEQLKRGMGIMQKNWEATAARGGIPADAPA 357
Query: 368 NALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 427
+ ++ G + KD D+VIEAV E++ +K+++F +L++ P +LA+NTS ++++
Sbjct: 358 KRMALIDGKVGLENVKDADLVIEAVFETMAVKKEVFGKLDQYAKPGAVLASNTSYLNIDA 417
Query: 428 VGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 487
+ +TS ++G HFFSPA+VM L EIVR ++T+ ++ +++ + I KVP VVG C
Sbjct: 418 IAAETSRPQDVLGMHFFSPANVMKLCEIVRADKTAPDALVTAVSIARKIAKVPAVVGVCD 477
Query: 488 GFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEF 547
GF NR + A L+ G ++D+ + FG+P+GPF + DLAG + + K
Sbjct: 478 GFVGNRMLAQRGKQAEKLLFEGALPQQVDAVVTKFGMPMGPFAMGDLAGLDIGWRSRK-- 535
Query: 548 DKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNI 606
DR +S + D L ++GR G+ GKG Y YE GS+ P PDP V +I+E L+ +
Sbjct: 536 -----DRGIKSEIADALCEAGRFGQKTGKGYYKYESGSRAPLPDPDVEKLIDET--LAKL 588
Query: 607 MPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVF 666
G K +V+++EI+E +++P++NE ++L EGI R SD+D + G +P YRGG ++
Sbjct: 589 --GLKRRNVSDEEILERMMYPMINEGAKILAEGIAARPSDIDVVWLYGYGWPIYRGGPMY 646
Query: 667 WADAVGANYVYTSLKKWSQLYGN-FFKPSRFLEERATKG 704
WAD+VG ++ L +++ + +P+ L++ A +G
Sbjct: 647 WADSVGLKHIAERLSYYAKETNDPSLEPAPLLKKLAEEG 685
>gi|148258278|ref|YP_001242863.1| 3-hydroxyacyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1]
gi|146410451|gb|ABQ38957.1| 3-hydroxyacyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1]
Length = 697
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 244/699 (34%), Positives = 389/699 (55%), Gaps = 29/699 (4%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+D V I+T+ +PPVNAL+ + G+ D + A + ++K IVLT G F G DI F
Sbjct: 10 HDIVGIVTIDSPPVNALSAAVRGGILDNVKAAIADPEIKVIVLTCGGRTFIAGADITEFG 69
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K ++ V++ IE+ KP++AA+ G ALGGGLE+A+ CH R+A +L
Sbjct: 70 KPP--------KPPALNDVLSTIENSPKPVIAAIHGTALGGGLEVALACHYRVATKDAKL 121
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
GLPE+ LG++PG TQRLPR VG A++M++ I + E K GLI+ +V E
Sbjct: 122 GLPEVKLGLLPGAGGTQRLPRAVGPELAVKMIVGGDPIGAAEAHKAGLIEEIV--EGPAS 179
Query: 189 VSRLWALDIAARRKPWIRSLHRTD-KLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDV 247
+ +A + A +P +R L D KL + R + A K + + A D
Sbjct: 180 GAEAFARKVVAENRP-LRKLRDDDSKLAAAKADRSIFTNAVAAITKKSRGLEAPFAAADA 238
Query: 248 IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRK 307
+ I G+ +E + F +L+ D S+ + FFA+R +K+ V + G K R V +
Sbjct: 239 VGYAIDLPFDEGLKREREGFLKLLTSDQSKAQRYAFFAEREAAKIAGVPE-GTKGRKVDR 297
Query: 308 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 367
VA+IG G MG GIA + I V L E E L +G+ ++ N RG + D
Sbjct: 298 VAIIGAGTMGGGIAMSFANAGIPVTLIETAEEQLKRGMGVMQKNWEATAARGGIPADAPA 357
Query: 368 NALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 427
+ ++ G + KD D+VIEAV E++ +K+++F +L++ P +LA+NTS ++++
Sbjct: 358 KRMALIDGKVGLEHVKDADLVIEAVFETMAVKKEVFGKLDQYAKPGAVLASNTSYLNIDA 417
Query: 428 VGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 487
+ +TS ++G HFFSPA+VM L EIVR E+T+ ++ +++ + I KVP VVG C
Sbjct: 418 IAAETSRPQDVLGMHFFSPANVMKLCEIVRAEKTAPDALVTAVSIARKIAKVPAVVGVCD 477
Query: 488 GFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEF 547
GF NR + A L+ G ++D+ + FG+P+GPF + DLAG + + K
Sbjct: 478 GFVGNRMLAQRGKQAEKLLFEGALPQQVDAVVTKFGMPMGPFAMGDLAGLDIGWRSRK-- 535
Query: 548 DKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNI 606
DR +S + D L ++GR G+ GKG Y YE GS+ P PDP V +I+E L+ +
Sbjct: 536 -----DRGIKSEIADALCEAGRFGQKTGKGYYKYEAGSRAPLPDPDVEKLIDET--LAKL 588
Query: 607 MPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVF 666
G K +V+++EI+E +++P++NE ++L EGI R SD+D + G +P YRGG ++
Sbjct: 589 --GLKRRAVSDEEILERMMYPMINEGAKILAEGIAARPSDIDVVWLYGYGWPIYRGGPMY 646
Query: 667 WADAVGANYVYTSLKKWSQLYGN-FFKPSRFLEERATKG 704
WAD+VG ++ L +++ + +P+ L++ A +G
Sbjct: 647 WADSVGLKHIAERLAFYAKETNDPSLEPAPLLKKLADEG 685
>gi|295699700|ref|YP_003607593.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Burkholderia
sp. CCGE1002]
gi|295438913|gb|ADG18082.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Burkholderia
sp. CCGE1002]
Length = 705
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 246/704 (34%), Positives = 375/704 (53%), Gaps = 23/704 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DG+ ++++ NPPVNAL + + L+ E A DVKAI+L G G F GG DI F
Sbjct: 14 RDGILVVSVDNPPVNALGAKVRSELRTAIEAAQQNPDVKAILLIGAGRNFIGGADIREFG 73
Query: 72 KVHGAGDVSLMPDV--SVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKT 129
K P V S+ V N IE K +VAA+ G ALGGGLE+A+ H RIA
Sbjct: 74 K----------PPVPPSLPEVCNRIEASAKLVVAAIHGAALGGGLEVALAAHYRIALSDA 123
Query: 130 QLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL 186
+LGLPE+TLG++PG TQR+PRL+G A+E+ML + + + E LGLID + S ++
Sbjct: 124 KLGLPEVTLGLLPGAGGTQRIPRLLGARAALELMLSGRHVGANEAHALGLIDRIGASGDV 183
Query: 187 LKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLD 246
L +A + R P +R L + +R ++ AR++ + ++ +D
Sbjct: 184 LAEGLAYARSLLTTRAP-VRRACDARGLADRAASRAAIEAARVEVSTKSRHLFSPIKIVD 242
Query: 247 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 306
++ + G+ E ++F + + GLVH FFA+RA K P KPR +
Sbjct: 243 AVQAALEMSFDDGLRHERQLFLQCLDSPQRAGLVHAFFAERAAQKAPETRKA--KPRAIA 300
Query: 307 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 366
V VIGGG MG+GIA A + + V + E + L G +E + L+ +G++T
Sbjct: 301 SVGVIGGGTMGAGIAVALLDAGLSVTMIERDDASLAYGRANVEKVYKALIAKGRMTSQAK 360
Query: 367 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 426
L G Y VD+VIEAV E + +K +F+EL++ C P +LATNTS +D++
Sbjct: 361 AALLARFDGSTSYDALHAVDLVIEAVFEDMAVKHAVFAELDRVCKPGAVLATNTSYLDID 420
Query: 427 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 486
+ S +IG HFFSPA++M LLE+V + SA V+ + K ++KVPV G C
Sbjct: 421 AIAASVSRPADVIGLHFFSPANLMKLLEVVVPAQVSADVVATAFDLAKKLRKVPVRAGVC 480
Query: 487 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKE 546
GF NR Y +A ++ G ++ID A+R FG P+GPFQ+ DLAG + AT K
Sbjct: 481 DGFIGNRVLAIYRAAADHMMEDGASPYQIDRAVREFGFPMGPFQVSDLAGGDIGWATRKR 540
Query: 547 FDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSN 605
+ + D + + G G+ G+G Y Y G++ +PDP V II+ R +N
Sbjct: 541 RAATRDAKLRYVQIADRICERGWFGQKTGRGYYLYADGARIGQPDPDVEAIIDAERERAN 600
Query: 606 IMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIV 665
I P + T+ EI+ + ++NE V+ EGI +R D+D + G FP +RGG +
Sbjct: 601 ITPR----TFTDHEIMRRYMAAMINEGANVVHEGIALRPLDVDVTFLHGYGFPRHRGGPM 656
Query: 666 FWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSA 709
+AD+VG V ++++++ F++PS + E +G L++
Sbjct: 657 KYADSVGLANVLADIREFAKEDPVFWQPSPLIVELVERGATLAS 700
>gi|170738585|ref|YP_001767240.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Methylobacterium sp.
4-46]
gi|168192859|gb|ACA14806.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Methylobacterium sp.
4-46]
Length = 691
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 248/694 (35%), Positives = 369/694 (53%), Gaps = 27/694 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA++TL + PVNAL + G+ A + V AIVL G G FS G DI F
Sbjct: 15 VAVLTLQSGPVNALGTALREGIAAALARAEADTAVTAIVLIGGGRMFSAGADITEFGTPP 74
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
+S+ +++ IE KP+VAA+ G ALGGGLE A+ CH R+A P ++GLP
Sbjct: 75 RG--------ISLPDLLDRIEAATKPVVAAIHGNALGGGLETALACHYRVAVPSAKVGLP 126
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 191
E+ LG++PG TQRLPR+VG KA+E+++ + + + +GLID + E L +
Sbjct: 127 EVKLGILPGAGGTQRLPRIVGPRKALEVIVGGAPLGAGQAAAMGLIDELAPEEGLRAHAV 186
Query: 192 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 251
+A + A +P + R ++L +A + R + + +AC+ +E
Sbjct: 187 AFAQRVVAEGRPLTKIRDRDERLAEGRDAPGLFDAFRKENARRMRGFEAPEACIACVEAA 246
Query: 252 IVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAV 310
G+ E + F +LV S +VFFA+R T+K+P+V D +P + +V V
Sbjct: 247 CRLPFPQGLAFEREQFLKLVSGSQSAAQRYVFFAERQTAKIPDVPEDTPTRP--IARVGV 304
Query: 311 IGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNAL 370
IG G MG GIA + I V + E E L +G+ I +N +G+L + +
Sbjct: 305 IGAGTMGGGIAMNFLNAGIPVTIVEARREALDRGLAVIRSNYENTARKGRLRPEDVQTRM 364
Query: 371 KMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGE 430
+L L + KD D++IEAV E + +K++IFS+L++ P ILA+NTS +D++ +
Sbjct: 365 GLLADTLAIEDLKDCDLIIEAVFEDMGIKKEIFSKLDRVAKPGAILASNTSYLDIDEIAS 424
Query: 431 KTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFA 490
T +IG HFFSPA+VM LLE+VR RT+ VI M VG+ + K+ V+VG C GF
Sbjct: 425 VTGRPADVIGMHFFSPANVMRLLEVVRGARTAKDVIATAMQVGRKVGKIAVLVGVCHGFV 484
Query: 491 VNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKA 550
NR + A L+ GV + +D I FGLP+GPF + DLAG + S+E +++
Sbjct: 485 GNRMLAERQREANRLILEGVTPWDVDRVIYEFGLPMGPFAMSDLAGLDI--GWSRETNRS 542
Query: 551 FPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGG 610
R DLL + R G+ G G Y Y+ K P P II +
Sbjct: 543 ESVR-------DLLCEIDRRGQKTGAGFYDYDAKRKASPSPVTEEIIARVAARQGV--AR 593
Query: 611 KPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADA 670
KP S ++EI+E L+P+VNE ++L+EG +RASD+D + G +P YRGG +FWAD
Sbjct: 594 KPAS--DQEILERCLYPMVNEGAKILDEGKAIRASDIDIVWINGYGWPVYRGGPMFWADG 651
Query: 671 VGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+G V L+ + YG+ F PS LE A +G
Sbjct: 652 IGLPTVLERLRAYQAEYGDAFAPSPLLERLAAEG 685
>gi|160896840|ref|YP_001562422.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Delftia acidovorans
SPH-1]
gi|160362424|gb|ABX34037.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Delftia acidovorans
SPH-1]
Length = 705
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 248/702 (35%), Positives = 381/702 (54%), Gaps = 30/702 (4%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+ V ++++ NPPVNAL + AGL E+A S VKA+++ G G F G DI F
Sbjct: 15 DGAVLVVSINNPPVNALGQAVRAGLLAAVEQAESDAAVKAVLIVGEGKAFIAGADIREFG 74
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K MP S+ V+N +E K +VAA+ G ALGGGLE+AM H R+A P +L
Sbjct: 75 K-------PAMPP-SLPEVLNRLEASDKIVVAAIHGPALGGGLEVAMSAHYRLALPAAKL 126
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVV-----TS 183
GLPE+ LG++PG TQR PRL+G+ A ++ML K ++++ GL+D +V T+
Sbjct: 127 GLPEVNLGLLPGAGGTQRAPRLMGVKAAADLMLSGKHLSAKAALAAGLVDKLVDGTDATA 186
Query: 184 EELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQA 243
L + L A + A RR R + DK +L+E LA AKK+ +
Sbjct: 187 AGLAYTNELLATNTAPRR---TRDIEIADKAAALAEL---DALAADTAKKSR-GLFSPLK 239
Query: 244 CLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPR 303
++ + + G+ KE +F E + GL+H FFA+R T+K+P PR
Sbjct: 240 IVECVRAAVELPFDEGIAKERALFVECLNSPQRAGLIHAFFAERETAKIPEAK--AAAPR 297
Query: 304 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQ 363
K+AVIGGG MG+GI + + + V + E +++ + +G +E GL+ +G++T+
Sbjct: 298 HFAKIAVIGGGTMGAGITVSALDAGLTVTMIERDADSIARGQANVEKVYNGLIAKGRMTE 357
Query: 364 DKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI 423
+ + Y + KDVD+VIEAV E + +K+ +F EL++ C P +LATNTS +
Sbjct: 358 EAKAAVMARYTPSTSYDDIKDVDLVIEAVFEDLEVKKAVFKELDRVCKPGAVLATNTSYL 417
Query: 424 DLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVV 483
D++ + TS +IG HFFSPA++M LLEIV + + V+ + K +KKVPV
Sbjct: 418 DIDAIAAATSRPQDVIGLHFFSPANIMKLLEIVVPAKVAPDVVTTAFELAKRMKKVPVRA 477
Query: 484 GNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAAT 543
G C GF NR Y Q+A ++ G + ID A+R FG P+GPFQ+ DLAG + AT
Sbjct: 478 GVCDGFIGNRILAVYKQAADYIMEDGASPYEIDEAVRGFGYPMGPFQVTDLAGGDIGWAT 537
Query: 544 SKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRR 602
K ++ + D + + G G+ G+G Y Y G++ +PDP VL I++ R
Sbjct: 538 RKRRAATRDPKARYVEVADRVCERGWFGQKTGRGFYLYPHGARVGQPDPEVLAIVDAERA 597
Query: 603 LSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRG 662
+ P T +EI+ + +VNE +V+EEGI +R D+D + G FP +RG
Sbjct: 598 KKGVTPR----KFTPEEIMRRYMAAMVNEGAKVVEEGIALRPLDVDVTFLSGYGFPRFRG 653
Query: 663 GIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
G + WAD G + V ++++++ F+KP+ LE+ +G
Sbjct: 654 GPMKWADMQGLDKVLADIREFAKEDALFWKPAPLLEKLVAEG 695
>gi|294899893|ref|XP_002776796.1| 3-hydroxyacyl-CoA dehyrogenase, putative [Perkinsus marinus ATCC
50983]
gi|239883997|gb|EER08612.1| 3-hydroxyacyl-CoA dehyrogenase, putative [Perkinsus marinus ATCC
50983]
Length = 733
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 255/718 (35%), Positives = 386/718 (53%), Gaps = 39/718 (5%)
Query: 7 TMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFD 66
++ + DGVA++TL NPPVNAL+ L + + VK IV+TG G FSGG +
Sbjct: 4 SIYIRQDGVAVLTLRNPPVNALSQAHCKSLVQNMKLLQANRTVKGIVITGEGKFFSGGAE 63
Query: 67 INVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA 126
I F+ H V + + LV+N I+ KP+VAA+ G+ALGGG E+A+ H R+A
Sbjct: 64 IMEFE-YHIRKGVKMNMAEGIHLVMNTIDQTDKPVVAAINGMALGGGFEVALASHYRVAV 122
Query: 127 PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS 183
P ++GLPE+ LG++PG TQRLPRL G+ A++ ML + I + + +ID +V +
Sbjct: 123 PTVKVGLPEVNLGLLPGGQGTQRLPRLAGVQVALQTMLGGQPIPAALAKRQKMIDEIVPA 182
Query: 184 EELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEARE--VLKLARLQAKKTAPNMPQH 241
++L+ + AL RR + + D++ + A E + ++ R + + AP
Sbjct: 183 DKLIDAAAAIALTKPVRRTSEM-TCSTADRVMVVGGAVEMGINQIDRFRKHQIAP----- 236
Query: 242 QACLDVIEEGIVHGG--YSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIG 299
+A ++ + G G E + F +L+ S L H+FFA+R +KV + +
Sbjct: 237 EAIGRCVKAAVESGADFQKGCRVEQEEFDKLLYSKESGALRHLFFAERIANKV---SGLR 293
Query: 300 LKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRG 359
KP ++KV V+G GLMG GIA + + VVL + E+L +G+ I+ N V R
Sbjct: 294 AKPLPIKKVGVVGAGLMGGGIAMCFVAKGMPVVLLDAKEEFLSRGMGLIKKNYETSVARK 353
Query: 360 KLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATN 419
L ++A LK++K LDY++F D D+VIEAV E++ LKQ IF +L+K P +L +N
Sbjct: 354 SLKLEEAAKRLKLIKPSLDYADFGDCDIVIEAVFENLKLKQDIFKQLDKVTKPDALLCSN 413
Query: 420 TSTIDLNIVGEKTSSQ-DRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKK 478
TS++D++ + + ++G HFFSPA+VM LLE VRT+ S I +M +GK+I K
Sbjct: 414 TSSLDIDAIASMVPKRAANVVGTHFFSPANVMKLLENVRTKGASDTTIATVMAMGKLINK 473
Query: 479 VPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYG 538
V V+VGNC GF NR PY R +V G D+ D+ FG+ +GP + DL G
Sbjct: 474 VAVLVGNCDGFVGNRMLGPYGAEVRQMVEEGGDLAEFDAVAVDFGMAMGPLSMSDLVGQD 533
Query: 539 VAAATSK-EFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTYEKGSKPKP-DPSVL 594
+ K D P L D L + GR G+ GKG+Y Y KG K D +L
Sbjct: 534 LFWRARKMAGDMKMETAVAIGPHDLTDWLCEKGRFGQKAGKGVYVYGKGRGDKKIDQEIL 593
Query: 595 PIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLG 654
++E ++ + P + EKE++E +LFP+VNE ++LEEG+ R SD+D + G
Sbjct: 594 EGVKEIQKRKGVTPR----VIDEKEMLERMLFPLVNEGFKILEEGMAQRPSDIDIVWIYG 649
Query: 655 MSFPSYRGGIVFWAD-AVGANYVYTSLKKWSQLYG------------NFFKPSRFLEE 699
FP +GG + WAD +G Y+ L+ + +F PSR LEE
Sbjct: 650 YGFPPVKGGPMHWADNYIGLGYLLERLRYYDNQAAERSTKNKNYRKPKYFVPSRLLEE 707
>gi|421747817|ref|ZP_16185486.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Cupriavidus necator
HPC(L)]
gi|409773513|gb|EKN55297.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Cupriavidus necator
HPC(L)]
Length = 693
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 244/696 (35%), Positives = 377/696 (54%), Gaps = 29/696 (4%)
Query: 14 GVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKV 73
G+A++T+ +PPVNAL+ + AG+ ++A + D VKAIVLT G F G DI F K
Sbjct: 15 GIAVLTIDSPPVNALSANVRAGILAGVKQAVADDAVKAIVLTCAGKTFIAGADITEFGKP 74
Query: 74 HGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGL 133
+P+V IED KP++AA+ G ALGGGLE+A+ CH R+AA + GL
Sbjct: 75 PTG---PALPEVQAA-----IEDAPKPVIAAIHGTALGGGLEVALVCHYRVAARSAKCGL 126
Query: 134 PELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVS 190
PE+ LG++PG TQRLPR+VG+ KA+EM+ + + ++GL+D + L +
Sbjct: 127 PEVNLGLLPGAGGTQRLPRIVGVEKALEMVTSGTHVPAPAAAEMGLVDLLTDDASLRADA 186
Query: 191 RLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 250
+A + +P + DK+ + E+ R + + + IE
Sbjct: 187 IAFARQVVGEGRPLRKVRDLDDKIAAARGKPEIFAEFRRANARRFRGFDAPEYNIRCIEA 246
Query: 251 GIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKVA 309
+ G+ +E +F EL+ S + FFA R ++P++ D L P VR+V
Sbjct: 247 AVELPFDEGLKRERAMFVELLNGTQSAAQRYYFFASRQVWQLPDIDADTPLLP--VRQVG 304
Query: 310 VIGGGLMGSGIATAHILNNIY-VVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
+IG G MG GIA + LN Y V + E + + L +G++TI N +G++T +
Sbjct: 305 IIGAGTMGGGIAM-NFLNAGYPVTIVETSQQALDRGVRTIRTNYENTAKKGRITATDIEH 363
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
+ +L L+ + D D+VIEAV E++ +K+ +F L++ P ILATNTS +D++ +
Sbjct: 364 RMALLTPTLEMEKLADADLVIEAVFENMDVKKDVFGRLDRIAKPGAILATNTSALDVDEI 423
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
TS + +IG HFFSPA+VM LLE+VR RT+ VI M + + I K+ +VG C G
Sbjct: 424 AAATSRPESVIGLHFFSPANVMKLLEVVRGARTAKPVIRTSMELARKIGKIAALVGVCPG 483
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR + A+ LV G + +D A+ FG P+GPF + DLAG + K
Sbjct: 484 FVGNRMLAQRQREAQKLVLEGALPWDVDRALYEFGFPMGPFAMSDLAGLDLGWVREK--- 540
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMP 608
S S L ++L + R G+ G G Y Y++ KP P++E+ R
Sbjct: 541 ------SSSSTLREILCEMERRGQKTGAGYYDYDEKRNAKPS----PVVEQVIRDFAAKQ 590
Query: 609 GGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWA 668
G V+E+EI+E ++P++NE ++LEEG +RASD+D V G +P YRGG +F+A
Sbjct: 591 GRTSRVVSEQEILERCIYPMINEGAKILEEGKAIRASDIDVIWVNGYGWPVYRGGPMFYA 650
Query: 669 DAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
D +G + V +L+++ + +G FKP+R LEE +G
Sbjct: 651 DTIGLDKVLETLRRYEESFGPDFKPARLLEELVAQG 686
>gi|221065494|ref|ZP_03541599.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Comamonas testosteroni
KF-1]
gi|220710517|gb|EED65885.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Comamonas testosteroni
KF-1]
Length = 705
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 241/705 (34%), Positives = 378/705 (53%), Gaps = 25/705 (3%)
Query: 8 MEVGNDG-VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFD 66
+E+ DG V ++++ NPPVNAL + GL E+A + VKA+V+ G G F G D
Sbjct: 10 VELKQDGDVLLVSVNNPPVNALGAAVRQGLMAAMEQADASAAVKAVVIVGQGKAFIAGAD 69
Query: 67 INVFQK--VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
I F K V +PDV N IE C KP+VA + G ALGGGLE+AM H R+
Sbjct: 70 IREFGKPPVQ-----PFLPDV-----CNRIEACSKPVVAVIHGAALGGGLEIAMSAHYRL 119
Query: 125 AAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVV 181
A P +LGLPE++LG++PG TQR PRL+G+ A E+ML + I ++ G GL+D +
Sbjct: 120 ALPGAKLGLPEVSLGLVPGAGGTQRAPRLMGVKAATELMLSGQQIGAKAGLAAGLLDKLD 179
Query: 182 TSEELLKVSRLWALDIAARRKPWIRSLHRT-DKLGSLSEAREVLKLARLQAKKTAPNMPQ 240
+ + +A ++ A+ P +R + T +L + A+ L R K + +
Sbjct: 180 DGADPVVAGLAYARELLAQGAP-LRPVSATPGRLADKAAAQAELDALRADTAKKSRGLFS 238
Query: 241 HQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGL 300
+D ++ + G+ E F + GL+H FFA+R T+K+P
Sbjct: 239 PLKIIDCVQAALDLPFAEGLKFERAQFLACIDSPQRAGLIHAFFAERETAKIPEAR--AA 296
Query: 301 KPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGK 360
+PR K+A+IGGG MG+GI + + + V + E ++E + +G +E GL+ +G+
Sbjct: 297 QPRAFSKIAIIGGGTMGAGITVSALDAGLVVTMIERDAESIARGQANVEKVYNGLIAKGR 356
Query: 361 LTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 420
++++ + Y + DVD+VIEAV E + +K+ +F EL++ C +LATNT
Sbjct: 357 MSEEAKAAIMARYTPSTRYDDIADVDLVIEAVFEDLEVKKAVFKELDRVCKRGAVLATNT 416
Query: 421 STIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVP 480
S +D++ + TS +IG HFFSPA++M LLEIV + + V+ + K +KKVP
Sbjct: 417 SYLDIDAIAAVTSRPQDVIGLHFFSPANIMKLLEIVVPAKVAPDVVTTAFELAKKMKKVP 476
Query: 481 VVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVA 540
V G C GF NR Y Q+A L+ G + ID A+R FG +GPFQ+ DLAG +
Sbjct: 477 VRAGVCDGFIGNRILATYKQAADYLMEDGASPYEIDEAVRGFGFAMGPFQVTDLAGGDIG 536
Query: 541 AATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEE 599
AT K ++ + D + + G G+ G+G Y Y +G++ +PDP VL I++
Sbjct: 537 WATRKRRAATRDPKARYVEIADRICEQGWFGQKTGRGFYLYPQGARIGQPDPEVLAIVDA 596
Query: 600 CRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPS 659
R + P +P T +EI+ + +VNE +V+ EGI +R D+D + G FP
Sbjct: 597 ERAKKGVAP--RPF--TAEEIMRRYMAAMVNEGAKVVGEGIALRPLDVDVTFISGYGFPR 652
Query: 660 YRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+RGG + WAD G V ++ +++ F+KP+ L++ +G
Sbjct: 653 HRGGPMKWADMQGLPKVLADIEAFAKEDALFWKPAPLLQKLVAEG 697
>gi|367472156|ref|ZP_09471747.1| Enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Bradyrhizobium
sp. ORS 285]
gi|365275555|emb|CCD84215.1| Enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Bradyrhizobium
sp. ORS 285]
Length = 698
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 241/698 (34%), Positives = 385/698 (55%), Gaps = 27/698 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D + I+T+ +PPVNAL+ + G+ D + A +KAIVLT G F G DI F
Sbjct: 10 QDIIGIVTIDSPPVNALSAAVRGGILDNVKAAIDDPTIKAIVLTCGGRTFIAGADITEFG 69
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K ++ V++ IE+ KP++AA+ G ALGGGLE+A+ CH R+A ++L
Sbjct: 70 KPP--------KPPALNDVLSTIENSPKPVIAAIHGTALGGGLEVALACHYRVATKDSKL 121
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
GLPE+ LG++PG TQRLPR VG A++M++ I + E K GLI+ +V
Sbjct: 122 GLPEVKLGLLPGAGGTQRLPRAVGPELAVKMIVGGDPIGAAEALKSGLIEEIVEGPASGG 181
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 248
V +A + A +P + K+ + R + A K + + A D +
Sbjct: 182 VE--FARKVVAENRPLRKLRDDESKIAAAKADRSIFTNAVAAITKKSRGLEAPFAAADAV 239
Query: 249 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 308
I G+ +E + F +LV D S+ + FFA+R +K+ +V + G K R V +V
Sbjct: 240 GYAIDLPFDEGLKREREGFLKLVASDQSKAQRYAFFAEREAAKIASVPE-GTKGRKVERV 298
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
A+IG G MG GIA + I V L E E L +G+ ++ N RG + D
Sbjct: 299 AIIGAGTMGGGIAMSFANAGIPVTLIETAEEQLKRGMGIMQKNWEATAARGGIPADAPAK 358
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
+ ++ G + KD D+VIEAV E++ +K+++F +L++ P +LA+NTS ++++ +
Sbjct: 359 RMALIDGKVGLENVKDADLVIEAVFETMAVKKEVFGKLDQYAKPGAVLASNTSYLNIDAI 418
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
+TS ++G HFFSPA+VM L EIVR E+T+ ++ +++ + I KVP VVG C G
Sbjct: 419 AAETSRPQDVLGMHFFSPANVMKLCEIVRAEKTAPDALVTAVSIARKIAKVPAVVGVCDG 478
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR + A L+ G ++D+ + FG+P+GPF + DLAG + + K
Sbjct: 479 FVGNRMLAQRGKQAEKLLFEGALPQQVDAVVTKFGMPMGPFAMGDLAGLDIGWRSRK--- 535
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIM 607
DR +S + D L ++GR G+ GKG Y YE GS+ P PDP V +I+E L+ +
Sbjct: 536 ----DRGIKSEIADALCEAGRFGQKTGKGYYKYEAGSRAPLPDPDVEKLIDET--LAKL- 588
Query: 608 PGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFW 667
G K +V+++EI+E +++P++NE ++L EGI R SD+D + G +P YRGG ++W
Sbjct: 589 -GLKRRAVSDEEILERMMYPMINEGAKILAEGIAARPSDIDVVWLYGYGWPIYRGGPMYW 647
Query: 668 ADAVGANYVYTSLKKWSQLYGN-FFKPSRFLEERATKG 704
AD+VG ++ L +++ + +P+ L++ A +G
Sbjct: 648 ADSVGLKHIAERLAFYAKETNDPSLEPAPLLKKLADEG 685
>gi|452749441|ref|ZP_21949203.1| enoyl-CoA hydratase [Pseudomonas stutzeri NF13]
gi|452006667|gb|EMD98937.1| enoyl-CoA hydratase [Pseudomonas stutzeri NF13]
Length = 701
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 260/704 (36%), Positives = 398/704 (56%), Gaps = 22/704 (3%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
V +EV + +A+IT+ NPPVNAL + GL F+ A + V+A+ L G F G
Sbjct: 5 VRLEVQGE-IALITVNNPPVNALGQAVRDGLLKAFQRAEADPQVRAVALMCEGNTFIAGA 63
Query: 66 DINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA 125
DI F K A +PDV + +IE C KP VA + G ALGGGLE+A+GCH RIA
Sbjct: 64 DIKEFGKSPQAPS---LPDV-----IEVIEVCSKPSVAVIHGTALGGGLEVALGCHYRIA 115
Query: 126 APKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 182
++GLPE+ LG++PG TQRLPRL G++KA++M++ + I + E + ++D +
Sbjct: 116 RKDAKVGLPEVKLGLLPGAGGTQRLPRLAGVAKALDMIVSGQPIGAAEAVEHNIVDELFD 175
Query: 183 SEELLKVSRLWALDIAARRKPWIRSLHRTDKL-GSLSEAREVLKLARLQAKKTAPNMPQH 241
E L + +A + + R+ +T L G+ +EA +++ + K P +
Sbjct: 176 GE-LREAGLAYARRMVDESRAPRRTGEQTQGLEGADNEA--LIRTKHAEVAKRMPGLFSP 232
Query: 242 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 301
C+ +E G+ +E ++F E + LVH FFA+R K+ N +K
Sbjct: 233 LRCIAAVEAATKLPLAEGLKRERELFAECLNSPQRGALVHSFFAERQAGKI-NDLPADVK 291
Query: 302 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 361
PR ++ AVIGGG MG GIA + + V L E+N + L +G++ V RG L
Sbjct: 292 PRPIKTAAVIGGGTMGVGIALSFANAGVPVKLLEINDDALQRGLQRARDTYAASVKRGSL 351
Query: 362 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 421
T++ L ++ GV DY+ DVD+V+EAV E + +KQ++F +L+ C P ILA+NTS
Sbjct: 352 TEEAMAQRLALIAGVTDYAALADVDVVVEAVFEEMGVKQQVFEQLDAVCKPGAILASNTS 411
Query: 422 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 481
++DLN + T + ++G HFFSPA+VM LLE+V E+TS +V+ M +GK +KKV V
Sbjct: 412 SLDLNAIAAFTKRPEDVVGLHFFSPANVMRLLEVVHGEKTSHEVLATAMAIGKKLKKVSV 471
Query: 482 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAA 541
VVG C GF NR F Y + A L+ G ++D A+R+FG+ +GPF + DL+G +
Sbjct: 472 VVGVCDGFVGNRMVFQYGREAEFLLEEGATPQQVDGALRNFGMAMGPFAMRDLSGLDIGQ 531
Query: 542 ATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEEC 600
A K P + D L ++G G+ G G Y YE G++ P+ +P + P++E
Sbjct: 532 AIRKRQRATLPAHLDFPTVSDKLCEAGMLGQKTGTGYYRYEPGNRTPQENPELAPMLEAA 591
Query: 601 RRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSY 660
R I + + E+ IVE +F +VNE ++LEEGI RASD+D + G FP++
Sbjct: 592 SREKGI----ERQKLDEQYIVERCIFALVNEGAKILEEGIAQRASDIDVIYLNGYGFPAF 647
Query: 661 RGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
RGG +F+AD+VG + V +K+ + G+++KP+ LE+ A +G
Sbjct: 648 RGGPMFYADSVGLDRVLARVKELHERCGDWWKPAPLLEKLAAEG 691
>gi|365898261|ref|ZP_09436229.1| Enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Bradyrhizobium
sp. STM 3843]
gi|365421006|emb|CCE08771.1| Enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Bradyrhizobium
sp. STM 3843]
Length = 698
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 245/699 (35%), Positives = 388/699 (55%), Gaps = 29/699 (4%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+D V I+T+ +PPVNAL+ + G+ + + A + +KAIVLT G F G DI F
Sbjct: 10 HDIVGIVTVDSPPVNALSAAVRGGILECVKAAVADPAIKAIVLTCAGRTFIAGADITEFG 69
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K ++ V++ IE+ KP++AA+ G ALGGGLE+A+ CH R+A +L
Sbjct: 70 KPP--------KPPALNDVLSEIENSPKPVIAAIHGTALGGGLEVALACHYRVATKDAKL 121
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
GLPE+ LG++PG TQRLPR VG A++M++ I + E K GLI+ +V E
Sbjct: 122 GLPEVKLGLLPGAGGTQRLPRAVGPELAVKMIVGGDPIGAAEAHKAGLIEEIV--EGPAS 179
Query: 189 VSRLWALDIAARRKPWIRSLHRTD-KLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDV 247
+A + A +P +R L D KL + R + A K + + A D
Sbjct: 180 GGEAFARKVVAEGRP-LRKLRDDDSKLAAAKADRSIFTSAVAALTKKSRGLEAPLAAADA 238
Query: 248 IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRK 307
+ I G+ KE + F L+ D S+ + FFA+R SK+ V + G K R V++
Sbjct: 239 VGYAIDLPFDEGLKKEREDFLRLLTSDQSKAQRYAFFAEREASKIAGVPE-GTKSRPVQR 297
Query: 308 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 367
VA+IG G MG GIA + + V L E E L +G+ ++ N RG + D
Sbjct: 298 VAIIGAGTMGGGIAMSFANAGVPVTLIETGEEQLKRGLGIMQKNWEATAARGGIPADAPA 357
Query: 368 NALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 427
+ ++ GV+ +D D+VIEAV E++ +K+++F +L++ P +LA+NTS ++++
Sbjct: 358 KRMALINGVVGLENVRDADLVIEAVFETMAVKKEVFGKLDQFAKPGAVLASNTSYLNIDE 417
Query: 428 VGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 487
+ ++TS ++G HFFSPA+VM L EIVR E+T+ ++ +++ + I KVP VVG C
Sbjct: 418 IAKQTSRPQDVLGMHFFSPANVMKLCEIVRAEKTAPDALVTAVSIARKIAKVPAVVGVCD 477
Query: 488 GFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEF 547
GF NR + A L+ G ++D+ + FG+P+GPF + DLAG + + K
Sbjct: 478 GFVGNRMLAQRGKQAEKLLFEGALPQQVDAVVTKFGMPMGPFAMGDLAGLDIGWRSRK-- 535
Query: 548 DKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNI 606
DR +S + D L ++GR G+ GKG Y YE GS+ P PDP V +I+E L+ +
Sbjct: 536 -----DRGIKSEIADALCEAGRFGQKTGKGYYKYEAGSRAPLPDPDVEKLIDET--LARL 588
Query: 607 MPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVF 666
G K V+++EI+E +++P++NE ++L EGI R SD+D + G +P YRGG ++
Sbjct: 589 --GLKKRVVSDEEILERMMYPMINEGAKILAEGIAARPSDIDVVWLYGYGWPIYRGGPMY 646
Query: 667 WADAVGANYVYTSLKKWSQLYGN-FFKPSRFLEERATKG 704
WAD VG ++ L +++ + +P+ L++ A +G
Sbjct: 647 WADTVGLKHIADRLAVYAKETSDPSLEPAPLLKKLADEG 685
>gi|264679896|ref|YP_003279805.1| 3-hydroxyacyl-CoA dehydrogenase [Comamonas testosteroni CNB-2]
gi|262210411|gb|ACY34509.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein [Comamonas
testosteroni CNB-2]
Length = 705
Score = 400 bits (1029), Expect = e-108, Method: Compositional matrix adjust.
Identities = 240/705 (34%), Positives = 380/705 (53%), Gaps = 25/705 (3%)
Query: 8 MEVGNDG-VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFD 66
+E+ DG V ++++ NPPVNAL + GL E+A + VKA+V+ G G F G D
Sbjct: 10 VELRQDGDVLLVSVNNPPVNALGAAVRQGLMAAMEQADANAAVKAVVIVGQGKAFIAGAD 69
Query: 67 INVFQK--VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
I F K V +PDV N IE C KP+VA + G ALGGGLE+AM H R+
Sbjct: 70 IREFGKPPVQ-----PFLPDV-----CNRIEACSKPVVAVIHGAALGGGLEIAMSAHYRL 119
Query: 125 AAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVV 181
A P +LGLPE++LG++PG TQR PRL+G+ A E+ML + I ++ G GL+D +
Sbjct: 120 ALPGAKLGLPEVSLGLVPGAGGTQRAPRLMGVKAATELMLSGQQIGAKAGLAAGLVDKLE 179
Query: 182 TSEELLKVSRLWALDIAARRKPWIRSLHRT-DKLGSLSEAREVLKLARLQAKKTAPNMPQ 240
+ + +A ++ A+ +R + T +L + A+ L R K + +
Sbjct: 180 EGTDPVAAGLAYARELLAQGAS-LRPVSATPGRLADKAAAQAELDALRADTTKKSRGLFS 238
Query: 241 HQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGL 300
+D ++ + G+ E F + GL+H FFA+R T+K+P
Sbjct: 239 PLKIIDCVQAALDLPFAEGLKFERAQFLACIDSPQRAGLIHAFFAERETAKIPEAR--AA 296
Query: 301 KPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGK 360
+PR K+A+IGGG MG+GI + + + V + E ++E + +G +E GL+ +G+
Sbjct: 297 QPRAFSKIAIIGGGTMGAGITVSALDAGLVVTMIERDAESIARGQANVEKVYNGLIAKGR 356
Query: 361 LTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 420
++++ + + Y + DVD+VIEAV E + +K+ +F EL++ C +LATNT
Sbjct: 357 MSEEAKASIMARYTPSTRYDDIADVDLVIEAVFEDLEVKKAVFKELDRVCKSGAVLATNT 416
Query: 421 STIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVP 480
S +D++ + TS +IG HFFSPA++M LLEIV + + V+ + K +KKVP
Sbjct: 417 SYLDIDAIAAVTSRPQDVIGLHFFSPANIMKLLEIVVPAKVAPDVVTTAFELAKKMKKVP 476
Query: 481 VVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVA 540
V G C GF NR Y Q+A L+ G + ID A+R FG +GPFQ+ DLAG +
Sbjct: 477 VRAGVCDGFIGNRILATYKQAADYLMEDGASPYEIDEAVRGFGFAMGPFQVTDLAGGDIG 536
Query: 541 AATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEE 599
AT K ++ + D + ++G G+ G+G Y Y +G++ +PDP VL I++
Sbjct: 537 WATRKRRAATRDPKARYVEIADRICENGWFGQKTGRGFYLYPQGARIGQPDPEVLAIVDA 596
Query: 600 CRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPS 659
R + + P +P T +EI+ + +VNE +V+ EGI +R D+D + G FP
Sbjct: 597 ERAKNGVTP--RPF--TAEEIMRRYMAAMVNEGAKVVGEGIALRPLDVDVTFISGYGFPR 652
Query: 660 YRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+RGG + WAD G V ++ +++ F+KP+ L++ +G
Sbjct: 653 HRGGPMKWADMQGLPKVLADIEAFAKEDALFWKPAPLLQKLVAEG 697
>gi|163793451|ref|ZP_02187426.1| Enoyl-CoA hydratase [alpha proteobacterium BAL199]
gi|159181253|gb|EDP65768.1| Enoyl-CoA hydratase [alpha proteobacterium BAL199]
Length = 702
Score = 400 bits (1029), Expect = e-108, Method: Compositional matrix adjust.
Identities = 246/697 (35%), Positives = 374/697 (53%), Gaps = 24/697 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+ +I ++NPPVNAL+ + AGL F++ + + K +V+ G+G F G DI F K
Sbjct: 13 IGLIQVVNPPVNALSQAVRAGLSAAFQQGANDPEAKVLVIYGDGRTFIAGADIREFGK-- 70
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
P ++ V+ IE C KP VAA+ G ALGGGLE+A+GC R+A P ++GLP
Sbjct: 71 -----PPQPP-ALGTVIGEIETCSKPTVAAIHGTALGGGLEVALGCLFRVAIPGAKVGLP 124
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 191
E+ LG+IPG TQRLPR+ G++ A+EM+ + + EE LG++DA++ ++++
Sbjct: 125 EVKLGIIPGAGGTQRLPRVAGVTAALEMITSGRHVPVEEAADLGIVDAIIDTKDVKAAGI 184
Query: 192 LWALDIAARRKPWIRSLHRTDKLGSLSEAR---EVLKLARLQAKKTAPNMPQHQACLDVI 248
+A + A + +L D+ G L+EAR V AR + +K+A + C+D +
Sbjct: 185 AFAQRVIAE---GLTALPVRDRDGKLAEARADRSVFADARKKLEKSARGLFSPFRCVDAV 241
Query: 249 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT-DIGLKPRGVRK 307
E + G+ +E ++F++ + +HVFF +R +KVP ++ DI +P V K
Sbjct: 242 EAAVDLPIDDGLKRERELFQQCMESPQRAAQIHVFFGEREVAKVPGMSKDITARP--VNK 299
Query: 308 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 367
AVIG G MG GIA I V + E + L +G+ + +N RG++T D
Sbjct: 300 AAVIGAGTMGGGIAMCFANAGIPVTVVETAQDALDRGLNRVRSNYDISAKRGRMTPDDVE 359
Query: 368 NALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 427
+ ++ LD ++ D D++IEAV ES+ +K+++F++L+K P +LATNTS +D++
Sbjct: 360 ARMALITPSLDLADLHDADLIIEAVFESLDVKKEVFAKLDKIAKPGAVLATNTSYLDVDA 419
Query: 428 VGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 487
+ TS ++G HFFSPA+VM LLE+VR +T + + VG+ KV VV G C
Sbjct: 420 IAAMTSRPADVLGMHFFSPANVMRLLEVVRGAKTDDDALRTALEVGRKFGKVAVVSGVCD 479
Query: 488 GFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEF 547
GF NR Y L+ G ID+AI FG P+G + + DLAG + T +
Sbjct: 480 GFIGNRMLRTYKTQMDYLLEDGALPQEIDAAITGFGFPMGLYAMGDLAGLDIGYMTRRRE 539
Query: 548 DKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIM 607
D P + + D L + GR G+ G G Y YE G P PDP V II E + I
Sbjct: 540 DATRPADARYVAIADRLYEKGRLGQKTGAGWYRYEDGRTPIPDPEVDAIILEESQKKGI- 598
Query: 608 PGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFW 667
+P +V EI L +VNE +VL EGI +R D+D + G FPS+ GG +FW
Sbjct: 599 -NRRPFTV--DEIQTRALCALVNEGAKVLGEGIALRPVDIDMVWLFGYGFPSWEGGPMFW 655
Query: 668 ADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
AD G V ++ ++ + P+ L E A G
Sbjct: 656 ADRRGLAKVLADIRGFADHDPKSWVPAPLLVELAEAG 692
>gi|70728857|ref|YP_258606.1| enoyl-CoA hydratase [Pseudomonas protegens Pf-5]
gi|68343156|gb|AAY90762.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
family protein [Pseudomonas protegens Pf-5]
Length = 706
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 251/697 (36%), Positives = 371/697 (53%), Gaps = 25/697 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+ ++TL NPPVNAL + + GL + A V AI+L G G F GG DI F
Sbjct: 18 ILVLTLDNPPVNALGVEVRRGLLAAMDSAADDPTVAAILLVGAGRHFCGGADIREF---- 73
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G P ++ VV IED KP+VAA++G+ALGGGLE+A+ H R+A +LGLP
Sbjct: 74 --GQTPQAP--ALPAVVKRIEDSAKPVVAAIQGVALGGGLEVALAAHYRLALGSARLGLP 129
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 191
E+ LG++PG TQRLPRL+G A+E+ML + + + E LG++D + E+ L
Sbjct: 130 EVLLGLLPGAGGTQRLPRLIGARAALELMLSGRHLNAREALDLGVVDRLAEGEDALAAGL 189
Query: 192 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 251
+A ++ +R LG RE + AR Q A + Q + +E
Sbjct: 190 AYARELVDSHA-GVRRTRDARALGDQHLQREQINAAREQLTHKAKGLLSPQNIIRAVEAA 248
Query: 252 IVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVI 311
+ G+ +E ++F+E + GLVH FFA+R K P T I +PR + +VAV+
Sbjct: 249 LDRPFDQGLEEERRLFQECLDSPQRAGLVHAFFAEREVLKAPE-TRIA-QPRPIEQVAVV 306
Query: 312 GGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALK 371
GGG MG+GIA + + + V + E + + L +G +E GL+ +G+L L
Sbjct: 307 GGGTMGAGIAVSALDAGLQVTMIERDQQALDRGRGNVEKVYDGLIEKGRLDAAGKAATLA 366
Query: 372 MLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEK 431
+ LDY + D+VIEAV E + KQ +F EL++ C P +LA+NTS +DLN + +
Sbjct: 367 RFRASLDYQDLARADLVIEAVFEDMAAKQAVFKELDRVCKPGAVLASNTSYLDLNAIADS 426
Query: 432 TSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAV 491
S +IG HFFSPA++M LLEIV + + V+ + K ++KVPV G C GF
Sbjct: 427 VSRPADVIGLHFFSPANIMKLLEIVVPAKVAPDVVATAFELAKKLRKVPVRAGVCDGFIG 486
Query: 492 NRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAF 551
NR Y Q+A ++ G ++ID A+R FG P+GPFQ+ DLAG + AT K KA
Sbjct: 487 NRILAVYRQAADYMMEDGASPYQIDQALRDFGFPMGPFQVADLAGGDIGWATRKR--KAA 544
Query: 552 ---PDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIM 607
PD + + D L + G G G+G Y Y +G + DP VL II+ R + I
Sbjct: 545 TRNPDARYVQ-IADRLCERGWFGHKTGRGYYLYAQGPRNATQDPEVLAIIDAERARAGIT 603
Query: 608 PGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFW 667
P +P EI+ + ++NE V+ EGI +R D+D + G FP YRGG + +
Sbjct: 604 P--RPFG--NPEILRRYMAAMINEGANVVHEGIALRPLDVDITFIHGYGFPRYRGGPLKY 659
Query: 668 ADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
AD G V ++++++ F+K S LE+ +G
Sbjct: 660 ADQYGLPQVLADIREFAEQDPLFWKASLLLEQLVERG 696
>gi|456358170|dbj|BAM92615.1| 3-hydroxyacyl-CoA dehydrogenase [Agromonas oligotrophica S58]
Length = 697
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 240/698 (34%), Positives = 386/698 (55%), Gaps = 27/698 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+D V I+T+ +PPVNAL+ + G+ D A + +KAIVLT G F G DI F
Sbjct: 10 HDIVGIVTIDSPPVNALSAAVRGGILDNVNAAIADPAIKAIVLTCGGRTFIAGADITEFG 69
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K ++ V++ IE+ KP++AA+ G ALGGGLE+A+ CH R+A + +L
Sbjct: 70 KPP--------KPPALNDVLSAIENSPKPVIAAIHGTALGGGLEVALACHYRVATKEAKL 121
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
GLPE+ LG++PG TQRLPR VG A++M++ I + E K GLI+ ++ E
Sbjct: 122 GLPEVKLGLLPGAGGTQRLPRAVGPELAVKMIVGGDPIGAAEALKSGLIEEII--EGPAS 179
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 248
+A + A +P + K+ + R + A K + + A D +
Sbjct: 180 GGEAFARKVLAENRPLRKLRDDESKIAAAKADRSIFTNAVAAITKKSRGLEAPFAAADAV 239
Query: 249 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 308
I G+ KE + F +LV D S+ + FFA+R +K+ V + G K R V +V
Sbjct: 240 GYAIDLPFDEGLKKEREGFLKLVASDQSKAQRYAFFAEREAAKIAGVPE-GTKGRKVERV 298
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
A+IG G MG GIA + + V L E E L +G+ ++ N RG + D
Sbjct: 299 AIIGAGTMGGGIAMSFANAGVPVTLIETAEEQLRRGMGIMQKNWEATAARGGIPADAPAK 358
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
+ ++ GV+ D D++IEAV E++ +K+++F +L++ P +LA+NTS ++++ +
Sbjct: 359 RMALINGVVGLENVGDADLIIEAVFETMAVKKEVFGKLDQYAKPGAVLASNTSYLNIDDI 418
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
++TS ++G HFFSPA+VM L EIVR E+T+ ++ +++ + I KVP VVG C G
Sbjct: 419 AKQTSRPQDVLGMHFFSPANVMKLCEIVRAEKTAPDALVTAVSIARKIAKVPAVVGVCDG 478
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR + A L+ G ++D+ + FG+P+GPF + DLAG + + K
Sbjct: 479 FVGNRMLAQRGKQAEKLLFEGALPQQVDAVVTKFGMPMGPFAMGDLAGLDIGWRSRK--- 535
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIM 607
DR +S + D L ++GR G+ GKG Y YE GS+ P PDP V +I+E L+ +
Sbjct: 536 ----DRGIKSEIADALCEAGRFGQKTGKGYYKYEAGSRAPLPDPDVERLIDET--LAKL- 588
Query: 608 PGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFW 667
G K +V+++EI+E +++P++NE ++L EGI R SD+D + G +P YRGG ++W
Sbjct: 589 -GLKRRAVSDEEILERMMYPMINEGAKILAEGIAARPSDIDVVWLYGYGWPIYRGGPMYW 647
Query: 668 ADAVGANYVYTSLKKWSQLYGN-FFKPSRFLEERATKG 704
AD+VG ++ L +++ + +P+ L++ A +G
Sbjct: 648 ADSVGLKHIAERLAFYAKETNDPSLEPAPLLKKLADEG 685
>gi|359790820|ref|ZP_09293699.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Mesorhizobium
alhagi CCNWXJ12-2]
gi|359253181|gb|EHK56342.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Mesorhizobium
alhagi CCNWXJ12-2]
Length = 694
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 274/710 (38%), Positives = 376/710 (52%), Gaps = 33/710 (4%)
Query: 7 TMEVGNDG-VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
T+ + DG +AI+T+ NPPVNAL + L+ E T V IVL G F G
Sbjct: 4 TVTITRDGEIAIVTIDNPPVNALGFGVREPLQKALETLTGDASVAGIVLACAGRTFVAGA 63
Query: 66 DINVFQKVHGAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
DI F K P EL ++ +E +KP VAA+ G ALGGGLELA+GCH R
Sbjct: 64 DITEFGK----------PKQRPELRDIIETLEAIRKPTVAAIHGAALGGGLELALGCHFR 113
Query: 124 IAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAV 180
IA +LGLPE+ LG++PG T RLPRLVG SKA++M++ + ++ L+DA+
Sbjct: 114 IADKGAKLGLPEVKLGLVPGAGGTVRLPRLVGPSKALKMIVSGAPVPADVALASALVDAI 173
Query: 181 VTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQ 240
S LL + +A D AA +R ++ + + + A +
Sbjct: 174 SESS-LLANAVAFARDKAASGVAAAPVRNRGGQI--IGADLAAFDADAAELARKARGLEA 230
Query: 241 HQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGL 300
AC + I + E ++F +LV D SR H+FFA+R +KVP V +
Sbjct: 231 PLACAQSVRNAITLPFDEALAAERELFTKLVSGDQSRAQRHLFFAEREATKVPGVGK-EV 289
Query: 301 KPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGK 360
PR +R+V VIG G MG GIA A + I V L E+N E L +G+ TIE N V+RG
Sbjct: 290 APREIRRVGVIGAGTMGGGIAMAFVNGGIPVTLLEMNREALDRGLATIEKNYAISVSRGS 349
Query: 361 LTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 420
L++D + + DY++ + D+VIEAV E + +K+++FS+L+ P ILATNT
Sbjct: 350 LSEDAKAGRMALFAPTTDYADLAECDLVIEAVFEDMAVKREVFSKLDAVAKPTAILATNT 409
Query: 421 STIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVP 480
S +D+N + TS ++G HFFSPA+VM LLEIVR E+T+ V+ + V K I KVP
Sbjct: 410 SYLDVNEIAASTSRPQDVLGLHFFSPANVMKLLEIVRGEKTAPDVLATALGVAKRIGKVP 469
Query: 481 VVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVA 540
VVVG C GF NR S A L+ G ID FG P+GPFQ+ DLAG +
Sbjct: 470 VVVGVCHGFVGNRMLSARSADAENLLLEGASPDEIDKVFTGFGWPMGPFQMYDLAGLDIG 529
Query: 541 AATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEE 599
K R + + D L + GR G+ GKG Y YE GS+ P PDP V +IE+
Sbjct: 530 WRNRKA-------RGQLAVIADRLCEQGRFGQKTGKGFYLYENGSRTPVPDPEVTQLIED 582
Query: 600 CRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPS 659
R + P EI+E L+P+VNE ++LEEGI RASD+D G FP
Sbjct: 583 SARERGVSRRAVPAG----EIIERTLYPMVNEGTKILEEGIAARASDIDIVWTNGYGFPV 638
Query: 660 YRGGIVFWADAVGANYVYTSLKKWSQLYG-NFFKPSRFLEERATKGIPLS 708
+GG +FWAD G + L+ W G + F+PS L+ A +G PLS
Sbjct: 639 GKGGPMFWADFEGLPKIIERLEYWHGGNGKDVFRPSALLKRIAAEGSPLS 688
>gi|410446988|ref|ZP_11301090.1| enoyl-CoA hydratase/isomerase family protein [SAR86 cluster
bacterium SAR86E]
gi|409979975|gb|EKO36727.1| enoyl-CoA hydratase/isomerase family protein [SAR86 cluster
bacterium SAR86E]
Length = 719
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 243/700 (34%), Positives = 390/700 (55%), Gaps = 31/700 (4%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVF- 70
N +AI+ + NPPVN L+ + AGL D +A + D +K I+LTG G F G DI+ F
Sbjct: 14 NGNIAILEVDNPPVNPLSSGVRAGLTDCIAKANNDDSIKGIILTGAGRSFIAGADISEFG 73
Query: 71 QKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQ 130
QK G PD+ L IE KKP++AA+ G ALGGGLE A+ C+ R+ K
Sbjct: 74 QKPDG-------PDLHTAL--KEIEFSKKPVLAAINGTALGGGLETALVCNYRMGTNKAI 124
Query: 131 LGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELL 187
+GLPE+ LG++PG TQRLPRL+G S+A++MM+ I++++ + G+IDA+ + +
Sbjct: 125 VGLPEVNLGLLPGAGGTQRLPRLIGPSQALKMMIAGTPISAKKALQQGVIDAISENSLIE 184
Query: 188 KVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDV 247
I P +R + +KL A +L A+ A KT +
Sbjct: 185 DGIAFLQDKITLSEHPKVRD--KNEKLLEARGADNILAEAKALAAKTRRGQFAPGQIISC 242
Query: 248 IEEGIVHGGYS-GVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV---PNVTDIGLKPR 303
+E I + G+ KE++ F E ++ ++H+FF +RA SK+ P T +
Sbjct: 243 VEAAINEDDFDIGMKKESEYFLECLVHPQREAMIHIFFGERAASKISDIPKETPL----H 298
Query: 304 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQ 363
+ V+G G MG GIA I V++ + + + L +G+ IE N + +V RG+++Q
Sbjct: 299 QINSAGVVGSGTMGGGIAMNFANAGIPVLILDQDEKNLSRGMGVIEKNYQMMVDRGRMSQ 358
Query: 364 DKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI 423
D+ + ++++ L Y + DVD+V+EAV E++ LKQ+IF L+ A ILA+NTS +
Sbjct: 359 DQKDTVMQIITPTLSYEDLADVDIVVEAVYENLELKQEIFKSLDTAVNDQAILASNTSGL 418
Query: 424 DLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVV 483
D++ + T+ ++++G HFFSPA+VM LLE+VR ++S + + +M +GK + K VV
Sbjct: 419 DIDAIASSTNRPNKVVGTHFFSPANVMRLLEVVRGSKSSDETMATVMALGKKMGKASVVS 478
Query: 484 GNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAAT 543
N GF NR + Y+ A +L+ G +IDSA+ SFG+ +GPF+++DL G +
Sbjct: 479 LNAPGFIGNRMLYGYTYQANMLLLEGALPNQIDSALESFGMSMGPFRMMDLVGLDLGWRA 538
Query: 544 SKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRR 602
K P + + D L + R G+ N KG Y Y +GS+ P P P I +E
Sbjct: 539 RKLGGIETP---LTNKISDALCEQDRFGQKNSKGFYNYSEGSRAPNPAPENESIYKEVSE 595
Query: 603 LSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRG 662
+NI + ++++EI++ +F +VNE ++LEEG+ RA D+D + G FP +RG
Sbjct: 596 KNNI----QRREISDQEIIDRCIFALVNEGAKILEEGVSQRAGDMDIVYINGYGFPIWRG 651
Query: 663 GIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERAT 702
G +F+A+ G V + ++++L NF+KP+ LE+ A+
Sbjct: 652 GPMFYANQFGLGKVVEKINEFAELDKNFWKPAPMLEKLAS 691
>gi|299529900|ref|ZP_07043328.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein [Comamonas
testosteroni S44]
gi|298722072|gb|EFI63001.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein [Comamonas
testosteroni S44]
Length = 705
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 241/705 (34%), Positives = 377/705 (53%), Gaps = 25/705 (3%)
Query: 8 MEVGNDG-VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFD 66
+E+ DG V ++++ NPPVNAL + GL E A + VKA+V+ G G F G D
Sbjct: 10 VELKQDGDVLLVSVNNPPVNALGAAVRQGLMAAMELADASATVKAVVIVGQGKAFIAGAD 69
Query: 67 INVFQK--VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
I F K V +PDV N IE C KP+VA + G ALGGGLE+AM H R+
Sbjct: 70 IREFGKPPVQ-----PFLPDV-----CNRIEACSKPVVAVIHGAALGGGLEIAMSAHYRL 119
Query: 125 AAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVV 181
A P +LGLPE++LG++PG TQR PRL+G+ A E+ML + I ++ G GL+D +
Sbjct: 120 ALPGAKLGLPEVSLGLVPGAGGTQRAPRLMGVKAATELMLSGQQIGAKAGLAAGLVDKLD 179
Query: 182 TSEELLKVSRLWALDIAARRKPWIRSLHRT-DKLGSLSEAREVLKLARLQAKKTAPNMPQ 240
+ + +A ++ A+ P +R + T +L + A+ L R K + +
Sbjct: 180 DGADPVAAGLAYARELLAQGAP-LRPVSATPGRLADKAAAQAELDALRADTAKKSRGLFS 238
Query: 241 HQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGL 300
+D ++ + G+ E F + GL+H FFA+R T+K+P
Sbjct: 239 PLKIIDCVQAALDLPFAEGLKFERAQFLACIDSPQRAGLIHAFFAERETAKIPEAR--AA 296
Query: 301 KPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGK 360
+PR K+A+IGGG MG+GI + + + V + E ++E + +G +E GL+ +G+
Sbjct: 297 QPRAFSKIAIIGGGTMGAGITVSALDAGLVVTMIERDAESIARGQANVEKVYNGLIAKGR 356
Query: 361 LTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 420
++++ L Y + DVD+VIEAV E + +K+ +F EL++ C +LATNT
Sbjct: 357 MSEEAKAAILARYTPSTRYDDIADVDLVIEAVFEDLEVKKAVFKELDRVCKSGAVLATNT 416
Query: 421 STIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVP 480
S +D++ + TS +IG HFFSPA++M LLEIV + + V+ + K +KKVP
Sbjct: 417 SYLDIDAIAAVTSRPQDVIGLHFFSPANIMKLLEIVVPAKVAPDVVTTAFELAKKMKKVP 476
Query: 481 VVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVA 540
V G C GF NR Y Q+A L+ G + ID A+R FG +GPFQ+ DLAG +
Sbjct: 477 VRAGVCDGFIGNRILATYKQAADYLMEDGASPYEIDEAVRGFGFAMGPFQVTDLAGGDIG 536
Query: 541 AATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEE 599
AT K ++ + D + ++G G+ G+G Y Y +G++ +PDP VL I++
Sbjct: 537 WATRKRRAATRDPKARYVEIADRICENGWFGQKTGRGFYLYPQGARIGQPDPEVLAIVDA 596
Query: 600 CRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPS 659
R + +P T +EI+ + +VNE +V+ EGI +R D+D + G FP
Sbjct: 597 ERAKKGVT--ARPF--TAEEIMRRYMAAMVNEGAKVVGEGIALRPLDVDVTFISGYGFPR 652
Query: 660 YRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+RGG + WAD G V ++ +++ F+KP+ L++ +G
Sbjct: 653 HRGGPMKWADMQGLAKVLADIEAFAKEDALFWKPAPLLQKLVAEG 697
>gi|407976062|ref|ZP_11156964.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein
[Nitratireductor indicus C115]
gi|407428563|gb|EKF41245.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein
[Nitratireductor indicus C115]
Length = 690
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 266/702 (37%), Positives = 382/702 (54%), Gaps = 37/702 (5%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DG+A+I L NPPVNAL + L E A + D+VKAIV+ G F G DI+ F
Sbjct: 10 EDGIAVILLDNPPVNALGHNLREPLFRALEAAKANDEVKAIVIACAGRTFIAGADISEFG 69
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K A +PD+ + L+E KP VAA+ G ALGGGLELA+GCH RIA ++
Sbjct: 70 KPPKAPS---LPDL-----IGLLESIDKPTVAAIHGTALGGGLELALGCHYRIAERSAKI 121
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
GLPE+TLG+IPG T RLPRLVG A+ +++ K I +E + LG +D + + LK
Sbjct: 122 GLPEVTLGLIPGAGGTVRLPRLVGPEAALGIIVSGKPIGMDEAFSLGAVDRIAEGD--LK 179
Query: 189 VSRL-WALDIAARRKPWIRSLHRTDKLGSLSEARE--VLKLARLQAKKTAPNMPQHQACL 245
+ +A + A P R+DKL A E + ++AR TAP
Sbjct: 180 SEAISFAREKLAEEAPHHHIRERSDKLQIDDAAFETAIEQVARKARGLTAP-----VKAA 234
Query: 246 DVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRG 304
+ + + + + +E ++F E V + S H+FFA R +KV V DI +P
Sbjct: 235 ESVRNAVTMEFGAALAREREIFLERVASEESAAQRHLFFATREAAKVRGVGRDIEARP-- 292
Query: 305 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 364
V ++ VIG G MG GIA A + V L E+N E L +G+ I+ N G V RG +++D
Sbjct: 293 VARIGVIGAGTMGGGIAMAFANGGLPVTLLEMNDEALARGLHQIDRNYAGSVKRGSISED 352
Query: 365 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 424
+ L ++G Y D+VIEAV E + +K+++F L+K P ILATNTS +D
Sbjct: 353 EKTARLARIQGTTSYDALAGCDLVIEAVFEKMDVKRQVFGALDKVLKPGAILATNTSYLD 412
Query: 425 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 484
+N + TS ++G HFFSPAH+M LLEIVR +RT+ V+ + + + I KVPVVVG
Sbjct: 413 VNEIAAVTSRPQDVVGLHFFSPAHIMKLLEIVRGDRTAPDVLATALALARRIGKVPVVVG 472
Query: 485 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATS 544
C GF NR + L+ G ++D FG P+GPFQ+ DL+G +A
Sbjct: 473 VCNGFVGNRMLAARREQNEALLLEGATPAQVDKVFTQFGWPMGPFQMADLSGLDIAWNNR 532
Query: 545 KEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRL 603
K + +P+ D L ++G G+ +G+G Y YE G++ P PDP V +IE R+
Sbjct: 533 KSLGQT-------APIADALCEAGHFGQKSGRGFYLYEDGARIPIPDPDVQALIE--RKA 583
Query: 604 SNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGG 663
+ + G + S+ +EI+E L+P++NE R+LEEGI RASD+D V G FP +GG
Sbjct: 584 AEL--GVERRSIDAEEIIERTLYPMINEGARILEEGIATRASDIDVVWVNGYGFPLAKGG 641
Query: 664 IVFWADAVGANYVYTSLKKWSQLYGN-FFKPSRFLEERATKG 704
+FWA+ G + L+ W GN F+P+ L + A G
Sbjct: 642 PMFWAERFGPARIVERLEHWHGRTGNALFEPAPLLRQLALTG 683
>gi|393778010|ref|ZP_10366298.1| multifunctional 3-hydroxybutyryl-CoA epimerase
/delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase/enoyl-CoA hydratase/3-hydroxyacyl-CoA
dehydrogenase [Ralstonia sp. PBA]
gi|392715061|gb|EIZ02647.1| multifunctional 3-hydroxybutyryl-CoA epimerase
/delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase/enoyl-CoA hydratase/3-hydroxyacyl-CoA
dehydrogenase [Ralstonia sp. PBA]
Length = 699
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 251/703 (35%), Positives = 386/703 (54%), Gaps = 32/703 (4%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+GVA+ITL PPVN L+ + + + + + A + V+AIV+ G G FS G D+ F
Sbjct: 12 ENGVAVITLSQPPVNPLSHAVRSAIVEGVDRAHTDVAVRAIVIVGAGRYFSAGADMREF- 70
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
G + + ++ V+ +++D KP++AA+EG+A+GGGLELA+ CH R+A TQ+
Sbjct: 71 -----GTPAATQEPTLSTVLRILDDTSKPVIAAIEGVAMGGGLELALACHYRVAQAGTQV 125
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLG--LIDAVVTSEEL 186
LPE+ G++PG TQRLPRL+G+ A++M++ K++T+ LG L D VV E +
Sbjct: 126 ALPEVKRGILPGAGGTQRLPRLLGVEAALDMIVTGKTVTAA---ALGAPLFDRVVDGE-V 181
Query: 187 LKVSRLWALDIAARRK-PWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACL 245
L + A ++A R P +R D+ L A + AR + +PN+P C+
Sbjct: 182 LSAALALAQEVADSRPLPRVR-----DRQVKLPGADAFFQHARRIVQARSPNLPAPLKCV 236
Query: 246 DVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGV 305
D + + G+ KE +F EL +R L H FFA+R K+P + G + R V
Sbjct: 237 DAVAAALEPFDI-GLPKERAMFVELSRSREARALQHGFFAEREAPKIPALP-AGTQARDV 294
Query: 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDK 365
+ AVIG G MG GIA I V L+E + E L +G+ I N +G+LT +
Sbjct: 295 QAGAVIGAGTMGGGIAMNFANAGIPVWLRETSQEALDRGLGIIRRNYEASAKKGRLTDAQ 354
Query: 366 ANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL 425
+ +++ L Y++ D+VIEAV E +K+ +F L++ P ILATNTST+D+
Sbjct: 355 VEQRMALIRPTLQYADIAQADVVIEAVFEDWGVKETVFRTLDEVMKPGAILATNTSTLDV 414
Query: 426 NIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 485
N + T ++G HFFSPA+VM LLE+V+ T+ VI M + K KV V+ G
Sbjct: 415 NRIAAFTRRPQDVVGLHFFSPANVMRLLEVVQGAATAPDVIATAMALAKRFSKVGVLSGV 474
Query: 486 CTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSK 545
C GF NR Y + A L+ G ++D A+ FG+ +GP ++ D+ G + A K
Sbjct: 475 CDGFIGNRMLDRYIRQAHFLLEEGALPEQVDRALEKFGMAMGPCRMNDMVGNDIGWAIRK 534
Query: 546 EFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLS 604
+PD++F + + D L ++GR G+ GKG Y YE G + P PDP V +IE
Sbjct: 535 RRYVEYPDQAF-ARVADPLCEAGRLGQKAGKGWYRYEPGKRDPIPDPEVRALIEAYSAQH 593
Query: 605 NIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGI 664
I ++++EIVE +F +VNE R+LEEGI RASDLD + G FP++RGG
Sbjct: 594 GI----TRRRISDQEIVERTVFALVNEGARLLEEGIAQRASDLDAVFLTGYGFPAFRGGP 649
Query: 665 VFWADAVGANYVYTSLKKWSQL---YGNFFKPSRFLEERATKG 704
+ +A++VG V +++ ++ G F+ P+ LE ++G
Sbjct: 650 MHYAESVGLFNVLRTIRGYAARGVGGGAFWTPAPLLERCVSEG 692
>gi|392951320|ref|ZP_10316875.1| hypothetical protein WQQ_09470 [Hydrocarboniphaga effusa AP103]
gi|391860282|gb|EIT70810.1| hypothetical protein WQQ_09470 [Hydrocarboniphaga effusa AP103]
Length = 712
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 250/696 (35%), Positives = 380/696 (54%), Gaps = 22/696 (3%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVNA+ I AGL + + D VK+ VL G F G DI F K
Sbjct: 27 DGVAVITLNNPPVNAIDQGIRAGLLESVGRLAADDSVKSAVLIGANDTFVAGADIKEFGK 86
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
L P ++E ++ +E KPIVAA+ G LGGGLE+A+ H R+A K +LG
Sbjct: 87 -------PLPPPTTIE-SLSAMEASPKPIVAALAGNTLGGGLEIALAAHWRVAVAKAKLG 138
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 189
LPE++LG++PG TQRLPRLVG +KA++M+L + + +LG++D +V + LL
Sbjct: 139 LPEVSLGIMPGAGGTQRLPRLVGGAKALDMILSGTPVNGTKALELGIVDELVDGD-LLAG 197
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
+ +A I A +P + DK+ + A + A + +K + ++ ++
Sbjct: 198 AIAFARKIVAEGRPLRVTSQLQDKVANTDPA--IFADAIKKNEKKWKGLLSPYKIVEAVQ 255
Query: 250 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 309
G E KV++E + L ++FFA+R +K+P+V LKP V+ A
Sbjct: 256 AACTLPFAEGAALELKVYRETQASPQRKALTYMFFAEREAAKIPDVPR-DLKPAPVKSAA 314
Query: 310 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 369
VIG G MG GIA + I V + E+ E L G+ I+ N V+RG TQ + +
Sbjct: 315 VIGAGTMGGGIAMSFANAGIPVKILELKQEALDAGLARIKGNYATSVSRGSTTQAQMDER 374
Query: 370 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 429
L + DY++ D D+V+EAV E++ +KQ +F L+ IL TNTST+D++ +
Sbjct: 375 LGRISTTTDYAQIGDADIVVEAVFENMEIKQGVFKTLDGVMKQGAILGTNTSTLDIDQIA 434
Query: 430 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 489
T +IG HFFSPA+VM L+E VR +TS ++I M V K I KVPV+ GNC GF
Sbjct: 435 NVTKRPQDVIGMHFFSPANVMKLVENVRGAKTSPEIIGRTMAVSKQIGKVPVLAGNCDGF 494
Query: 490 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDK 549
NR Y + L+ G ++ID+A++ FG P+G F + D+AG V +++ +
Sbjct: 495 IGNRILAAYGRECDFLLEEGATPWQIDTALQGFGFPMGLFLMRDMAGLDVGWRI-RQYRE 553
Query: 550 AFPDRSFQ-SPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMP 608
F D++ + SP+ D + + GR G+ G G Y YE G PDP + +I + I
Sbjct: 554 QFRDKNQRYSPVGDRICELGRYGQKTGAGYYKYE-GRNATPDPEIEALIVKVSADLGI-- 610
Query: 609 GGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWA 668
+ V+++EIV +L +VNE +++ EGI +RASD+D V G FP ++GG +FWA
Sbjct: 611 --ERRKVSDEEIVWRVLSVMVNEGAKIVGEGIAIRASDIDVTYVFGYGFPRHQGGPMFWA 668
Query: 669 DAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+ G + V ++ + G+ +KP+ LE+ G
Sbjct: 669 EQQGLDKVLAKIRAYHAEQGDNWKPAELLEKIVAAG 704
>gi|92115984|ref|YP_575713.1| 3-hydroxyacyl-CoA dehydrogenase [Nitrobacter hamburgensis X14]
gi|91798878|gb|ABE61253.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
[Nitrobacter hamburgensis X14]
Length = 707
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 251/713 (35%), Positives = 387/713 (54%), Gaps = 29/713 (4%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+DG+AI+T+ +PPVNAL + G+ + + A + VKAIVL G F G DI F
Sbjct: 10 HDGIAIVTVDSPPVNALGAAVRRGILECAQTAVADPAVKAIVLACAGRTFIAGADITEFG 69
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K P E+V L E+ KP VAA+ G ALGGGLE+A+GCH R+A +L
Sbjct: 70 K-------PTQPPALAEVVAAL-ENSPKPTVAAIHGTALGGGLEVALGCHFRVAVKDARL 121
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
GLPE+ LG++PG TQRLPR VG A++M++ + + + E K GLIDA+V E
Sbjct: 122 GLPEVKLGLLPGAGGTQRLPRAVGPELAVKMIVGGEPVGATEALKQGLIDAIV--EGPAS 179
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 248
+A + A R+P R +L + R + A K A + A + +
Sbjct: 180 GGEAFACRVLAERRPLRRLRDDDSRLMAAKANRSIFTDAVAAVTKRARGLEAPFAAAEAV 239
Query: 249 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 308
+ + +E ++F +L+ D S+ + FFA+R ++V V + G KPR V +V
Sbjct: 240 GLSLDTPFDEALKQERELFLKLMNGDQSKAQRYAFFAEREAARVAGVPE-GTKPRKVERV 298
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
A+IG G MG GIA + I V L E+ E L +G+ + N RG + D+
Sbjct: 299 AIIGAGTMGGGIAMSFANAGIPVTLIEMGDESLKRGLGVMRKNFEATAARGGIAADEPAR 358
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
+ ++ GV+ KD D+VIEAV E++ +K+++F+ L+K +LA+NTS +++N +
Sbjct: 359 RMGLVTGVVGLEHVKDADLVIEAVFETMAVKKEVFATLDKFARSGAVLASNTSYLNINEI 418
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
T ++G HFFSPA+VM L EIVR +T+ V++ + V + I KVPVVVG C G
Sbjct: 419 ASVTKRPQDVLGMHFFSPANVMKLCEIVRGAKTAPDVLVTAVAVARRIAKVPVVVGVCDG 478
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR S+ A L+ G ++D+ FG+P+GPF + DLAG + + +
Sbjct: 479 FVGNRMLAARSRQADKLLFEGALPRQVDAVATRFGMPMGPFAMDDLAGLDIGWRSRR--- 535
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLP-IIEECRRLSNI 606
DR +S + D L ++GR G+ GKG Y YE GS+ P PDP V I++ C RL
Sbjct: 536 ----DRGVKSEIADALCEAGRFGQKTGKGYYKYEGGSRAPLPDPDVETLIVDACARL--- 588
Query: 607 MPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVF 666
G + + + EI+E +++P VNE R+LEEGI R D+D + G +P YRGG ++
Sbjct: 589 --GLRRREIGDNEILERLVYPTVNEGARILEEGIAARPGDIDVVWLYGYGWPIYRGGPMY 646
Query: 667 WADAVGANYVYTSLKKWSQLYGN-FFKPSRFLEERATKGIPLSAPVSSSSTSR 718
+AD VG ++ L +++ + +P+ L+ A +G ++P + +++
Sbjct: 647 YADQVGLRHIADRLSYYAEATNDPSLEPAPLLKRLAAEGRTFASPAAGRKSTQ 699
>gi|421483297|ref|ZP_15930874.1| 3-hydroxyacyl-CoA dehydrogenase [Achromobacter piechaudii HLE]
gi|400198541|gb|EJO31500.1| 3-hydroxyacyl-CoA dehydrogenase [Achromobacter piechaudii HLE]
Length = 707
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 249/701 (35%), Positives = 376/701 (53%), Gaps = 26/701 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+D + +ITL +PPVNAL+ + L + A S V+AI+L G G F G DI F
Sbjct: 15 DDDILVITLDHPPVNALSADVRHDLAAAIQAAQSDPHVRAILLVGAGKNFIAGADIREFG 74
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K +PDV N IE KP+VA + G ALGGGLE+A+ H R+A P +L
Sbjct: 75 K---PPKPPALPDV-----CNQIEASDKPVVAVLHGAALGGGLEVALAAHYRVALPGAKL 126
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
GLPE+ LG++PG TQR PRL+G A+++ML K +++E K GL+DA+ ++ L
Sbjct: 127 GLPEVNLGLLPGAGGTQRTPRLIGARAALDLMLSGKHLSAEAALKAGLVDALGDGDDALA 186
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 248
+ + A RS TD L + A A Q KT + +D +
Sbjct: 187 AGLAYTRRLLAEGAGPRRSRDATDALADKAAALAEASAAGEQVAKTLRGLYSPAKIVDAV 246
Query: 249 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 308
I G+ E +F + + GLVH FFA+R T+K+P + +PR + K+
Sbjct: 247 RAAIEQPFDEGLRTERALFLQCLDSPQRAGLVHAFFAERETAKIPELK--AARPRRLEKI 304
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
V+GGG MG+GIA + + + VV+ E + L +G + L +G++T D+ +
Sbjct: 305 GVVGGGTMGAGIAVSVLDAGLPVVMVEQDDAALERGRARVAQVYDLLQKKGRITADERDA 364
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
+ G Y D D++IEAV E + +K +F++L++ P +LATNTS +D+N +
Sbjct: 365 RMARFSGATTYDALGDADLIIEAVFEDMDVKLAVFAQLDRVAKPGAVLATNTSYLDVNRI 424
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
T ++G HFFSPA++M LLEIV E TSA+ + + + ++K PV G C G
Sbjct: 425 ASATRGPADVLGLHFFSPANIMKLLEIVVGEHTSAETVATGFELARRLRKTPVRAGVCDG 484
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKE-- 546
F NR + Q+A +++ G + ID+A+R FG P+GP+Q+ DLAG + AT K
Sbjct: 485 FIGNRILAVHRQAADMMMEDGASPYDIDAAVREFGYPMGPYQMADLAGGDIGWATRKRRA 544
Query: 547 --FDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRL 603
D A R Q P D L + G G+ G+G Y Y G++ PDP VL II+E RR
Sbjct: 545 ATRDPAL--RYVQIP--DRLCERGWFGQKTGRGFYLYPDGARVGTPDPEVLAIIDEERRR 600
Query: 604 SNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGG 663
+++ P +P T ++I L ++NE+ VL +GI +R SD+D + G FP YRGG
Sbjct: 601 ASVTP--RPF--THEDIQRRYLAAMINEAANVLHQGIALRPSDVDVVFLSGYGFPRYRGG 656
Query: 664 IVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+ +AD+VG + V ++ +++ F+KPS L + A G
Sbjct: 657 PLHYADSVGLDRVLADIRSYAEEDPAFWKPSPLLVQLAESG 697
>gi|395005317|ref|ZP_10389201.1| 3-hydroxyacyl-CoA dehydrogenase [Acidovorax sp. CF316]
gi|394316700|gb|EJE53410.1| 3-hydroxyacyl-CoA dehydrogenase [Acidovorax sp. CF316]
Length = 699
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 263/704 (37%), Positives = 385/704 (54%), Gaps = 33/704 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA+ITL NPPVN L + G+ D A + V +IV+TG GG FSGG DI F
Sbjct: 11 VAVITLANPPVNGLGLATRQGIVDGLGRANADPAVTSIVITGAGGAFSGGADIKEF---- 66
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G + + ++ V+ IE+ KP+VAA+ +A+GGGLELA+GCH R+AAP + LP
Sbjct: 67 --GTDKSLQEPNLLSVIAAIENSAKPVVAAMHTVAMGGGLELALGCHYRVAAPGCSIALP 124
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSE-----EGWKLGLIDAVVTSEEL 186
E+ LG+IPG TQRLPR++G+ A+ +++ + + SE G KL D +V S E
Sbjct: 125 EVKLGLIPGAGGTQRLPRVIGVEAALNLIVSGEPVKSELIGSVPGQKL--FDKLVASPEA 182
Query: 187 LKVSRLWALDIAA--RRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 244
L L A R P +R+L E + AR K A N P C
Sbjct: 183 LAAEALAFAQSVAEVRPLPLVRNLPCKH-----PEGDAYFQFARNMVKGMAKNYPAPAKC 237
Query: 245 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRG 304
+D +E G+L E ++F L+ SR L H+F A+RA SK+P+V K R
Sbjct: 238 VDAVEAATKRKFADGMLFEREIFINLMWTPESRALRHLFMAERAASKIPDVPSDTPK-RE 296
Query: 305 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 364
++ VAVIG G MG GI+ + I V + E E L +G+ TI+ N V +GKL +D
Sbjct: 297 IKSVAVIGAGTMGGGISMNFLNAGIPVKILEAKQEALDRGVATIKKNYEAQVKKGKLKED 356
Query: 365 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 424
K + +L LDY++ KD D+VIEAV E + +K+ +F +L+ P ILA+NTST+D
Sbjct: 357 KYAQRMALLTTTLDYADLKDADLVIEAVFEELGVKEAVFKQLDAVMKPGAILASNTSTLD 416
Query: 425 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 484
++ + T + ++G HFFSPA+VM LLE+VR +TS V+ +M +GK IKK VV G
Sbjct: 417 VDKIAAFTKRPEDVVGMHFFSPANVMKLLEVVRGAKTSKDVLATVMAIGKKIKKTSVVSG 476
Query: 485 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATS 544
C GF NR YS+ A L+ G ++D A+ FG +GPF++ DLAG + A
Sbjct: 477 VCDGFIGNRMIEQYSRQAGFLLDEGATPQQVDRAVEKFGFAMGPFRMGDLAGNDIGWAIR 536
Query: 545 KEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVLPIIEECRRL 603
K D + S D L + GR G+ G G Y Y+ G + P V +IE+ R+
Sbjct: 537 KRRAVERADMKY-SRTADKLCELGRFGQKTGAGWYDYQAGKRDAIPSDLVNKMIEDHRKE 595
Query: 604 SNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGG 663
I P ++++EIVE ++F +VNE +LE+GI ++ D+D + G FP YRGG
Sbjct: 596 LGITPR----KISDEEIVERLVFALVNEGAHILEDGIASKSGDIDMVYLTGYGFPIYRGG 651
Query: 664 IVFWADAVGANYVYTSLKKWSQLYGN---FFKPSRFLEERATKG 704
+ +A VG V ++ ++++ + F+KP+ L + A +G
Sbjct: 652 PMHYASEVGLFNVVQAMDRFAKNPNDDAQFWKPAPLLAKLAAEG 695
>gi|83312089|ref|YP_422353.1| glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a
[Magnetospirillum magneticum AMB-1]
gi|82946930|dbj|BAE51794.1| Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a
[Magnetospirillum magneticum AMB-1]
Length = 703
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 249/707 (35%), Positives = 380/707 (53%), Gaps = 28/707 (3%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
VT+ V +D +A +T+ +PPVNA P+ AGL+ F + +R D A+++ G F G
Sbjct: 5 VTLSV-SDRIATVTIDSPPVNAADHPVRAGLQKVFTDLAARSDYDAVLVLCAGRTFMAGA 63
Query: 66 DINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA 125
DI F D + +L NL+E+C KP+VAA+ G ALG G ELAM CH RIA
Sbjct: 64 DIGEF-------DTGIKAPHHQDLF-NLVENCAKPVVAALHGTALGAGTELAMACHYRIA 115
Query: 126 APKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 182
++GLPEL+LG+IPG TQR PRL+GL A++++L K + + + +LGL+D + +
Sbjct: 116 DKGARIGLPELSLGIIPGAGGTQRAPRLIGLDAAMDLVLSGKPLPAPKAAELGLVDEIAS 175
Query: 183 SEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAR--EVLKLARLQAKKTAPNMPQ 240
+ +A + + RT + A+ E++ + Q KT N
Sbjct: 176 GDLNAAALAFAKKLVAEGK-----GVRRTCDMAPKDAAKDAEIIAARQAQVAKTMKNRTS 230
Query: 241 HQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGL 300
L+ + G+ EA + K+L +R + H+FFA R K+P +T +
Sbjct: 231 PLKALEAMAATTTLSFAEGLRLEADISKQLEHAVEARAMRHLFFADREVRKIPGITK-DI 289
Query: 301 KPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGK 360
K R +RKV +IG G MG GIA I V + +V+ E L +G+ I N V+RG
Sbjct: 290 KARPIRKVGIIGAGTMGGGIAMCFANIGIPVTIIDVSDENLQRGLGVIRKNYERSVSRGS 349
Query: 361 LTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 420
LTQ++ + + +L DY+ KD D+ IEAV E + LK+ IF++L+ P IL TNT
Sbjct: 350 LTQEQLESRMGLLSASTDYAALKDADLAIEAVFEKMELKKDIFAKLDAVLPAGAILGTNT 409
Query: 421 STIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVP 480
ST+D++ + T +IG HFFSPA+VMPLLEIV+ ++T+ V+L + + K+IKK
Sbjct: 410 STLDIDEIANTTKRPADVIGLHFFSPANVMPLLEIVQGKQTAMDVLLTALDMAKLIKKTG 469
Query: 481 VVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVA 540
VV C GF NR PY + A +V G ID A+ +G+ +G + D+AG V
Sbjct: 470 VVSKVCYGFIGNRMMDPYGREAERMVLEGATPAEIDGALEGWGMAMGILAVYDMAGVEVG 529
Query: 541 AATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKP-DPSVLPIIE- 598
T PD LL+ + G+ G+G Y Y+ + + DP V+ ++
Sbjct: 530 DNTRIANPHMVPDDPSFYRCSTLLVANKWLGQKVGRGYYRYDSPDRKRASDPEVIEMMHA 589
Query: 599 ECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFP 658
E +RL+ +P KP + EI+E L+ ++NE ++LEEGI +RASD+D G FP
Sbjct: 590 EGKRLN--VPARKP---GKDEILERCLYSMINEGAKLLEEGIALRASDIDVVYTAGYGFP 644
Query: 659 SYRGGIVFWADAVGANYVYTSLKKWSQ-LYGNFFKPSRFLEERATKG 704
YRGG +F+AD +G +Y + ++ + L ++ P+ LE+ A G
Sbjct: 645 RYRGGPMFYADTIGLKVIYDKIVEFQKTLDPRYWTPAPLLEKLAKAG 691
>gi|146338085|ref|YP_001203133.1| enoyl-CoA hydratase [Bradyrhizobium sp. ORS 278]
gi|146190891|emb|CAL74896.1| Enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Bradyrhizobium
sp. ORS 278]
Length = 697
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 242/699 (34%), Positives = 385/699 (55%), Gaps = 29/699 (4%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D + I+T+ +PPVNAL+ + G+ D + A +KAIVLT G F G DI F
Sbjct: 10 QDIIGIVTIDSPPVNALSAAVRGGILDNVKAAIDDPAIKAIVLTCGGRTFIAGADITEFG 69
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K ++ V++ IE+ KP++AA+ G ALGGGLE+A+ CH R+A ++L
Sbjct: 70 KPPNP--------PALNDVLSTIENSPKPVIAAIHGTALGGGLEVALACHYRVATKDSKL 121
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
GLPE+ LG++PG TQRLPR VG A++M++ I + E K GLI+ +V
Sbjct: 122 GLPEVKLGLLPGAGGTQRLPRAVGPELAVKMIVGGDPIGAAEAHKSGLIEEIVEGPASGG 181
Query: 189 VSRLWALDIAARRKPWIRSLHRTD-KLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDV 247
V +A + A +P +R L D K+ + R + A K + + A D
Sbjct: 182 VE--FARKVVAENRP-LRKLRDDDSKIAAAKADRSIFTNAVAAITKKSRGLEAPFAAADA 238
Query: 248 IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRK 307
+ I G+ +E + F +L+ D S+ + FFA+R +K+ V + G K R + +
Sbjct: 239 VGYAIDLPFDEGLKREREGFLKLLTSDQSKAQRYAFFAEREAAKIAGVPE-GTKGRKIER 297
Query: 308 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 367
VA+IG G MG GIA + I V L E E L +G+ ++ N RG + D
Sbjct: 298 VAIIGAGTMGGGIAMSFANAGIPVTLIETAEEQLKRGMGIMQKNWEATAARGGIPADAPA 357
Query: 368 NALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 427
+ ++ G + KD D+VIEAV E++ +K+++F +L++ P +LA+NTS ++++
Sbjct: 358 KRMALIDGKVGLENVKDADLVIEAVFETMAVKKEVFGKLDQYAKPGAVLASNTSYLNIDA 417
Query: 428 VGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 487
+ +TS ++G HFFSPA+VM L EIVR E+T+ ++ +++ + I KVP VVG C
Sbjct: 418 IAAETSRPQDVLGMHFFSPANVMKLCEIVRAEKTAPDALVTAVSIARKIAKVPAVVGVCD 477
Query: 488 GFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEF 547
GF NR + A L+ G ++D+ + FG+P+GPF + DLAG + + K
Sbjct: 478 GFVGNRMLAQRGKQAEKLLFEGALPQQVDAVVTKFGMPMGPFAMGDLAGLDIGWRSRK-- 535
Query: 548 DKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNI 606
DR +S + D L ++GR G+ GKG Y YE GS+ P PDP V +I+E L+ +
Sbjct: 536 -----DRGIKSEIADALCEAGRFGQKTGKGYYKYEAGSRAPLPDPDVEKLIDET--LAKL 588
Query: 607 MPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVF 666
G K +V+++EI+E +++P++NE ++L EGI R SD+D + G +P YRGG ++
Sbjct: 589 --GLKRRNVSDEEILERMMYPMINEGAKILAEGIAARPSDIDVVWLYGYGWPIYRGGPMY 646
Query: 667 WADAVGANYVYTSLKKWSQLYGN-FFKPSRFLEERATKG 704
WAD+VG + L +++ + +P+ L+ A +G
Sbjct: 647 WADSVGLKQIAERLSYYAKETNDPSLEPAPLLKRLADEG 685
>gi|27382932|ref|NP_774461.1| fatty oxidation complex subunit alpha [Bradyrhizobium japonicum
USDA 110]
gi|27356105|dbj|BAC53086.1| bll7821 [Bradyrhizobium japonicum USDA 110]
Length = 698
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 241/698 (34%), Positives = 384/698 (55%), Gaps = 27/698 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+D V I+T+ +PPVNAL+ + G+ + + A + +K IVLT G F G DI F
Sbjct: 10 HDEVGIVTVNSPPVNALSAAVRGGILECIKAAVADPAIKGIVLTCAGRTFIAGADITEFG 69
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K A ++ V++ IE+ KP+VAA+ G ALGGGLE+A+ CH R+A + +L
Sbjct: 70 KPPKA--------PALNDVLSEIENSPKPVVAAIHGTALGGGLEVALACHFRVAVKEAKL 121
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
GLPE+ LG++PG TQRLPR VG A++M++ I + E K GLI+ +V E
Sbjct: 122 GLPEVKLGLLPGAGGTQRLPRAVGPELAVKMIVGGDPIGAAEALKNGLIEEIV--EGPAS 179
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 248
+ + A ++P R KL + R + A K + + A D +
Sbjct: 180 GGEAFVRKLLAEKRPLRRLRDDDSKLAAAKADRSIFTNAVAAMTKKSRGLEAPFAAADAV 239
Query: 249 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 308
I G+ KE + F +LV D S+ + FFA+R +K+ V + G K R V +V
Sbjct: 240 GYAIDFPFDEGLKKEREGFLKLVASDQSKAQRYAFFAEREAAKIAGVPE-GTKSRPVNRV 298
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
A++G G MG GIA + + V L E E L +G+ ++ N RG + D
Sbjct: 299 AILGAGTMGGGIAMSFANAGVPVTLIETGEEQLKRGLGIMQKNWEATAARGGIPADAPAK 358
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
+ ++ GV+ D D+VIEAV E++ +K+++F +L++ P +LA+NTS ++++ +
Sbjct: 359 RMALITGVVGIENVGDADLVIEAVFETMAVKKEVFGKLDQFAKPGAVLASNTSYLNIDEI 418
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
+ T ++G HFFSPA+VM L EIVR ++T+ ++ +T+ + I KVP VVG C G
Sbjct: 419 AKSTKRPQDVLGMHFFSPANVMKLCEIVRADKTAPDALVTAVTIARKIAKVPAVVGVCDG 478
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR + + L+ G ++D+ + FG+P+GPF + DLAG + + K
Sbjct: 479 FVGNRMLAQRGKQSEKLLFEGALPQQVDAVVTKFGMPMGPFAMGDLAGLDIGWRSRK--- 535
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVLPIIEECRRLSNIM 607
DR +S + D L ++GR G+ GKG Y YE GS+ PDP V +I+E L+ +
Sbjct: 536 ----DRGIKSEIADALCEAGRFGQKTGKGYYKYEAGSRSALPDPEVEKLIDET--LARL- 588
Query: 608 PGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFW 667
G K +V+++EI+E +++P++NE ++LEEGI R SD+D + G +P YRGG +FW
Sbjct: 589 -GRKKRAVSDEEILERMMYPMINEGAKILEEGIAARPSDIDVVWLYGYGWPIYRGGPMFW 647
Query: 668 ADAVGANYVYTSLKKWSQLYGN-FFKPSRFLEERATKG 704
AD VG ++ L +++ + +P+ L++ A +G
Sbjct: 648 ADTVGLKHIADRLSFYAKETNDPSLEPAPLLKKLAAEG 685
>gi|307944786|ref|ZP_07660124.1| noyl-CoA hydratase/3,2-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA
dehydrogenase [Roseibium sp. TrichSKD4]
gi|307772000|gb|EFO31223.1| noyl-CoA hydratase/3,2-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA
dehydrogenase [Roseibium sp. TrichSKD4]
Length = 771
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 247/709 (34%), Positives = 379/709 (53%), Gaps = 34/709 (4%)
Query: 3 APRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFS 62
AP VT+E N + ++ + NPPVNA + + AGL ++ + VK I + G G F
Sbjct: 82 APIVTVETSN-AIGLVAINNPPVNAASQAVRAGLVAAMDQLSVDTSVKVIAMYGVGRTFI 140
Query: 63 GGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHA 122
G DI F K +PDV N IE +KP+++ + G ALGGGLE+A+ HA
Sbjct: 141 AGADIREFGK---PPQEPWLPDV-----CNRIEAMEKPVISVLHGNALGGGLEVALATHA 192
Query: 123 RIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDA 179
RIA P +G PE+TLG++PG TQR PRL G++ +++++ I +E ++GLID
Sbjct: 193 RIALPGLTIGFPEVTLGILPGAGGTQRAPRLAGIAASLDLITTGNRIEAEASHEIGLIDV 252
Query: 180 VVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMP 239
+ + R A+ A + RT +L +++E + + K+ PN+
Sbjct: 253 IADGD-----PRDLAIKFAEQVLSGELETRRTGEL-TVTEDPDAIATVAETLKRKQPNLF 306
Query: 240 QHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIG 299
C++ + I+ G+ KE +F E + GL+H FFA+RA SK+P +
Sbjct: 307 SPHKCVEAVAASILPLS-EGLQKERSLFFECMESPQRAGLIHAFFAERAVSKIPEAKE-- 363
Query: 300 LKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRG 359
PR + + VIGGG MGSGIATA +L V+L E + + +G+ I N+ G V RG
Sbjct: 364 -TPRTIENIGVIGGGTMGSGIATACLLAGFQVILAERDEAGVERGVSIISGNLDGAVKRG 422
Query: 360 KLTQDKANNAL-KMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 418
K+T D+ + L L DY+ F D D+VIEAV E + +K+ +F +L+ C +LAT
Sbjct: 423 KVTADQRDTILSNALSTTTDYAAFSDADLVIEAVFEDMDVKKSVFKQLDAICKDGAVLAT 482
Query: 419 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKK 478
NTS +D+N + TS + +IG HFFSPAHVM LLE+V ++T+ V+ +GK ++K
Sbjct: 483 NTSYLDVNEIAASTSRPEDVIGLHFFSPAHVMKLLEVVVADKTAPDVVATGFALGKRLRK 542
Query: 479 VPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYG 538
+ V G C GF NR Y ++A L+ G +D A+ ++G +GPF + DL+G
Sbjct: 543 IAVRAGVCDGFIGNRILNTYKKAADYLMMDGASPEEVDRAMVNYGFAMGPFTVGDLSGQD 602
Query: 539 VAAATSKEFDKAFPDRSFQSPLV---DLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLP 595
+ A K + P R+ Q V D L + G+ GKG Y Y +GS P +P +
Sbjct: 603 IGWAARK---RQAPMRAQQERYVAIPDRLCEQEMFGRKTGKGYYVYGEGS-PTLNPEAVA 658
Query: 596 IIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGM 655
IIE+ R + I P + +E EI I+ ++ E+ +LE+GI +R D+D + G
Sbjct: 659 IIEDERAKAGITPR----NFSEDEITARIMTAIIKEAISILEDGIALRPIDIDAVYLFGY 714
Query: 656 SFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
FP +RGG + ADA+GA + ++ + Q F++ L E A +G
Sbjct: 715 GFPRFRGGPMHTADAIGAAELVKRIETYVQEDAFFWRVPNLLAETAQRG 763
>gi|84684289|ref|ZP_01012191.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Maritimibacter alkaliphilus HTCC2654]
gi|84668042|gb|EAQ14510.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Rhodobacterales bacterium HTCC2654]
Length = 698
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 248/699 (35%), Positives = 374/699 (53%), Gaps = 30/699 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
V +I + NPPVNA + GL D A + ++ I + G F G DI F
Sbjct: 19 VGLICIDNPPVNASGQAVRQGLVDAVAAANADAGIEVIAIYAAGRTFVAGADIKEF---- 74
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G L P S+ +N IE +KP+++A G ALGGGLE+ MG HAR+ ++GLP
Sbjct: 75 --GKTPLEP--SLPDTINAIEASEKPVISAPHGTALGGGLEICMGTHARVGVKGLRVGLP 130
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 191
E+ LG++PG TQR PRL+G+ ++M L + ++ EE +GLID + E R
Sbjct: 131 EVNLGLLPGASGTQRGPRLMGMKNTLDMALSGRQVSGEEALSMGLIDGLEAGE-----PR 185
Query: 192 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 251
AL A RT LG + + A++ AKK M H ++IE
Sbjct: 186 DVALAAAEDVLSGKLKTRRTSDLGVELDEAALDDAAKMVAKK----MKHHPTAPNMIEAV 241
Query: 252 IVHGG--YSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 309
+ G G+ E K F E + S+G+ H FFA+RA SK+P PR + K+
Sbjct: 242 RMSTGPMADGMAYERKSFMEGLKDPASQGMRHAFFAERAVSKIPEGK---ATPREIAKIG 298
Query: 310 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 369
VIGGG MGSGIATA + + V L E++ E L KG+ I N+ G V RGK+++ K +NA
Sbjct: 299 VIGGGTMGSGIATAALTSGFAVRLIEISQEGLDKGVGFITGNLGGAVKRGKMSEAKRDNA 358
Query: 370 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 429
+ L+ D DVD+VIEAV E++ +K+ IF +L+K C P ILA+NTS +D+N +
Sbjct: 359 MARLEPSTDMESLSDVDLVIEAVFENMDVKKDIFGQLDKICKPGAILASNTSYLDINEIA 418
Query: 430 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 489
TS + +IG HFFSPA++M LLE+V ++T+ +V+ + K +KKV V G C GF
Sbjct: 419 SATSRPEDVIGLHFFSPANLMRLLEVVVADKTAPEVVATGFALAKKMKKVGVRAGVCDGF 478
Query: 490 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDK 549
NR Y ++A L+ G +ID+A+ FG +GP+++ DLAG + A K
Sbjct: 479 IGNRILAYYGKTAGYLMEDGASPQQIDNALEDFGFAMGPYKVGDLAGLDIGWANRKRMSA 538
Query: 550 AFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPG 609
P+ + D + + G G+ G G Y Y+ +P+P L II+ R I+P
Sbjct: 539 TRPNDERYVRIHDKICEEGMFGRKTGSGFYIYDD-EGIRPNPRALEIIDAERAAKGILPK 597
Query: 610 GKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWAD 669
+ T++EIVE + +++E+ RV+EEGI +R D+D + G FP +RGG + +AD
Sbjct: 598 ----TFTDEEIVERYMTAMISEAARVVEEGIALRPIDVDAVFLFGYGFPRFRGGPLHYAD 653
Query: 670 AVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLS 708
+GA + ++++++ ++K L A G +
Sbjct: 654 TIGAKELVARIERYAEDDAYYWKVPAILRRMAEDGTTFA 692
>gi|385208794|ref|ZP_10035662.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia sp. Ch1-1]
gi|385181132|gb|EIF30408.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia sp. Ch1-1]
Length = 706
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 242/696 (34%), Positives = 370/696 (53%), Gaps = 23/696 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
V ++T+ + PVNAL+ + GL E A + + V+A+++ G G F G DI F K
Sbjct: 18 VLLVTIDHAPVNALSADVRRGLLAAVEAADADNAVEAVLIVGAGRNFIAGADIREFGK-- 75
Query: 75 GAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
P V L V N IE C KP+VAA+ G ALGGGLE+A+ H RIA +LG
Sbjct: 76 --------PPVPPALPDVCNRIEACTKPVVAAIHGAALGGGLEVALAAHYRIAVEGAKLG 127
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 189
LPE+ LG++PG TQR PRL+G A++++L + +S+E LGLID + +S+++L
Sbjct: 128 LPEVQLGLLPGAGGTQRTPRLIGAQAALDLILSGRHASSKEALALGLIDRLGSSDDILAE 187
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
+ ++ A P +R LG + + + AR + K + + +D +E
Sbjct: 188 GLAYVHELLAAHAP-VRRTREAAALGDRAASLAAVTAARAETAKKSRGLFSPLKIIDAVE 246
Query: 250 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 309
I G+ E K+F E + GL+H FFA+R K P D KPR + +
Sbjct: 247 AAIEQPFDEGLRLERKLFLECLDSPQRAGLIHAFFAEREVLKAPETRDA--KPRALNAIG 304
Query: 310 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 369
V+GGG MG+GIA A + + V + E + L +G+ IE GL+ +G+++ DK
Sbjct: 305 VVGGGTMGAGIAVAALDAGLPVTMIERDDASLARGLAHIEKVYDGLIAKGRMSADKKAAV 364
Query: 370 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 429
+ G Y D D+VIEAV E + +KQ +F+EL++ C +LATNTS +D++ +
Sbjct: 365 MARWNGSTSYDALADADLVIEAVFEDLAVKQAVFAELDRVCKAGAVLATNTSYLDIDAIA 424
Query: 430 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 489
S +IG HFFSPA++M LLE+V ++ SA V+ K ++K PV G C GF
Sbjct: 425 ASISRPADVIGLHFFSPANIMKLLEVVVPKQVSADVVATAFEFAKNLRKTPVRAGVCDGF 484
Query: 490 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDK 549
NR Y +A ++ G ++ID+A+R+FG P+GPFQ++DLAG + A K
Sbjct: 485 IGNRVLAVYRAAADAMMEDGASPYQIDAAVRAFGFPMGPFQVVDLAGGDIGWAARKRRAA 544
Query: 550 AFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKP-KPDPSVLPIIEECRRLSNIMP 608
+ + D L + G G+ G+G Y Y +GS+ PDP V II+ R + I P
Sbjct: 545 TRNPAARYVQIADRLCERGWFGQKTGRGFYLYPEGSRSGTPDPEVEAIIDAERARAGITP 604
Query: 609 GGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWA 668
S T+ EI+ + ++NE V+ E I +R D+D + G FP YRGG + +A
Sbjct: 605 R----SFTDDEIIRRYMAAMINEGANVVHERIALRPLDVDVTFLYGYGFPRYRGGPMKYA 660
Query: 669 DAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
D VG + ++++++ F+K S L E +G
Sbjct: 661 DMVGLPKILADIREFAKEDPLFWKASPLLVELVERG 696
>gi|127513792|ref|YP_001094989.1| 3-hydroxyacyl-CoA dehydrogenase [Shewanella loihica PV-4]
gi|126639087|gb|ABO24730.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Shewanella loihica PV-4]
Length = 708
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 249/700 (35%), Positives = 378/700 (54%), Gaps = 22/700 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
A+I L PPVN+L + + L + A + + V AIVL +G F GG DI+ F
Sbjct: 13 TAVIILNQPPVNSLGLALRTHLLADLKRAEADESVDAIVLASSGKLFCGGADISEFS--- 69
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
+ D P++ V + +E K +VAAV GLALGGG EL + C RIA P +LGLP
Sbjct: 70 -SDDALAEPNLPQ--VCDALEASPKLVVAAVNGLALGGGCELTLACDYRIALPAAKLGLP 126
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE-ELLKVS 190
E+ LG++PG TQRLPR+ G+ A+EM+ + + + G+ID + ++ +
Sbjct: 127 EVNLGILPGAGGTQRLPRIGGVQLALEMITSGRPLGAAAMLDAGVIDNLYQDGGNFIQAA 186
Query: 191 RLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 250
+A ++ A+ KP + ++S E+ R + + + C+ +E
Sbjct: 187 VDFAQELVAQHKPKRSCFEMSVDTSNISS--EIFNEFRAAIARRSRGYYAPERCIQAVEA 244
Query: 251 GIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAV 310
G+ +E ++F E + +R H+FFA+R +K+P + R +RKVAV
Sbjct: 245 ACELPLAEGLKREHQLFMECLDTPQARAQQHLFFAERGVAKIPGINPKTTATREIRKVAV 304
Query: 311 IGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNAL 370
IG G MG GIA I I + ++N E L +G+ I N + +GKL+Q + + +
Sbjct: 305 IGSGTMGGGIAMNFINVGIPTQILDLNGEALERGLGVIRKNYEYTLKKGKLSQAQLDERM 364
Query: 371 KMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGE 430
+L G DY++ DVD+VIEAV E + +K+++F L+ C P ILATNTST+D++ +
Sbjct: 365 ALLSGTTDYADIADVDLVIEAVFEKMEIKKQVFKTLDATCKPGAILATNTSTLDVDEIAA 424
Query: 431 KTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFA 490
+TS ++G HFFSPA+VM LLEIVR +T+ +L + + + IKKVPVV G C GF
Sbjct: 425 ETSRPQDVLGLHFFSPANVMRLLEIVRANKTAPDALLTTVQLAQRIKKVPVVSGVCWGFI 484
Query: 491 VNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKA 550
NRA Y + + L+ G +ID FG+P+G ++DLAG V T +E KA
Sbjct: 485 GNRATDSYLRESMSLILEGASPAQIDKVHTEFGMPMGLPSMVDLAGIDVGILT-REDRKA 543
Query: 551 FP---DRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIM 607
F D S + L L K R G+ G+GLY YE G + DP VL + E + +
Sbjct: 544 FTTDLDPSHFAILHKLYAKQ-RYGQKTGRGLYIYE-GRDKQEDPEVLELAAEAAKEFGVT 601
Query: 608 PGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFW 667
P ++++EI+E ++P++NE R+LEEGI +RASD+D G FP +RGG + +
Sbjct: 602 R-RSPEQISDQEILERTIYPIINEGARILEEGIALRASDIDIVLAYGFGFPIFRGGPMQY 660
Query: 668 ADAVGANYVYTSLKKWSQLYGN---FFKPSRFLEERATKG 704
AD +G V T+L K+ +FKP+ LE +G
Sbjct: 661 ADEIGLERVLTALNKYRDTLDKGELWFKPAPLLERLVKEG 700
>gi|427404633|ref|ZP_18895373.1| hypothetical protein HMPREF9710_04969 [Massilia timonae CCUG 45783]
gi|425716804|gb|EKU79773.1| hypothetical protein HMPREF9710_04969 [Massilia timonae CCUG 45783]
Length = 696
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 258/699 (36%), Positives = 379/699 (54%), Gaps = 27/699 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA+ITL NPPVN L + + + A S VKAIVLTG G FSGG DI F
Sbjct: 11 VAVITLNNPPVNGLGLATRSAAVQGVQAAESDPAVKAIVLTGAGKAFSGGADIREFNSPK 70
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
+ + ++ ++ ++E KP+VAA+ +A+GGGLELA+GCH R+A P Q+ LP
Sbjct: 71 A------LTEPTLHSLIRVVEGSSKPVVAAIHSVAMGGGLELALGCHYRVALPGAQIALP 124
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS-EELLKVS 190
E+ LG+IPG TQRLPR++GL KA+ M+L + SE+ L D V + ELL +
Sbjct: 125 EVKLGLIPGAGGTQRLPRVLGLEKALGMILGGIPMLSEKLAGTPLFDEVFQAGAELLPAA 184
Query: 191 RLWALDIAARRK-PWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
+A IA R P +R D++ +A L AR Q A P +AC++ +
Sbjct: 185 IAYAERIADLRPLPKVR-----DRVVEHPDAAGFLASARAQVDAAAGPFPAPRACVEAVA 239
Query: 250 EGIVHGGYSGVLK-EAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRK 307
+ + L+ E + F +L S+ L H FFA+RA KVP+V D L R +
Sbjct: 240 ASVTADSFEDGLRFERERFIQLTTTSESKALRHAFFAERAAGKVPDVPADTPL--RSIAS 297
Query: 308 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 367
AV+G G MG GIA I V L E + L +G+ + V++GKL ++
Sbjct: 298 AAVVGAGTMGRGIAMNFANAGIPVTLLETKQDALDQGLAAMRKLYESGVSKGKLKPEQLE 357
Query: 368 NALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 427
+ ++ G L Y D+V+EAV E + +K+ +F EL+K P ILATNTST+D+N
Sbjct: 358 QRMALVTGTLSYDAIAQADIVVEAVFEDIGVKELVFRELDKVMKPGAILATNTSTLDVNR 417
Query: 428 VGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 487
+ T +IG HFFSPAHVM LLEIVR RT V+ + + K ++K+ VV G C
Sbjct: 418 IAAFTRRPQDVIGLHFFSPAHVMKLLEIVRGARTGKDVLATALALSKKLRKIGVVSGVCD 477
Query: 488 GFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEF 547
GF NR Y + A L+ G ++D AI +FG +GPF++ DLAG + K
Sbjct: 478 GFIGNRMLEQYLRQAVFLLEEGALPEQVDRAIEAFGFAMGPFRMSDLAGNDIGWHIRKRR 537
Query: 548 DKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGS-KPKPDPSVLPIIEECRRLSNI 606
P ++ S L DLL + GR G+ G G Y Y G K P +V ++ R ++I
Sbjct: 538 ALESPGFTY-SKLPDLLCEQGRFGQKTGAGWYDYRAGERKALPSEAVNDMV--VRHSADI 594
Query: 607 MPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVF 666
G ++ ++EIVE +++ +VNE R++EEGI +RASD+D + G FP +RGG +
Sbjct: 595 --GVSRRAIADEEIVERLVYALVNEGARIIEEGIALRASDVDMVYLSGYGFPLHRGGPML 652
Query: 667 WADAVGANYVYTSLKKWSQ-LYGNFFKPSRFLEERATKG 704
+AD+VG V +++ +++ G ++P+ L A+ G
Sbjct: 653 YADSVGLPKVLEAVEGFARGRQGEAWQPAPLLARLASLG 691
>gi|383758293|ref|YP_005437278.1| 3-hydroxyacyl-CoA dehydrogenase [Rubrivivax gelatinosus IL144]
gi|381378962|dbj|BAL95779.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
[Rubrivivax gelatinosus IL144]
Length = 702
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 249/710 (35%), Positives = 377/710 (53%), Gaps = 33/710 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA++TL NPPVN L + L E A + V AIV+TG G FSGG DI F
Sbjct: 11 VAVLTLDNPPVNGLGLATRRELSAGLERALAHPAVVAIVVTGAGKVFSGGADIKEF---- 66
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G + + ++ ++ +E KP+VAA+ G +GGGLEL++ CH R+AAP T++ LP
Sbjct: 67 --GTDRAIAEPNLHSLIRQVELAGKPVVAAMHGTCMGGGLELSLACHYRVAAPATKVALP 124
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSE-----EGWKLGLIDAVVTSEEL 186
E+ LG++PG TQRLPR++ + A+ M++ + + SE G KL D +V E L
Sbjct: 125 EVKLGLLPGAGGTQRLPRVLDVETALNMIVSGEPVASELLASVPGQKL--FDQIVEGELL 182
Query: 187 LKVSRLWAL----DIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQ 242
A P +R L + + AR K A + P
Sbjct: 183 AGAVAFAAAKGHEHAGGAPLPRVRDLK-----ARHANPDAFFQFARNTVKAMARHFPAPA 237
Query: 243 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 302
C+D +E + +G+ E ++F L+ S+ L H FFA+RA SK+P+V + +
Sbjct: 238 KCVDAVEAAVKRDIDAGLAYERELFMALMFTPESQALRHAFFAERAASKIPDVPE-DTQL 296
Query: 303 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 362
R + KV V+G G MG GI+ + + V + E +E L +G+ TI N V +GKL
Sbjct: 297 RRIAKVGVVGAGTMGGGISMNFLNAGLPVTILETTAEALERGVATIRRNYEAQVRKGKLK 356
Query: 363 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 422
+DK + +L L Y++ D D+VIEAV E + +KQ++F L++ P ILA+NTST
Sbjct: 357 EDKYQQRMALLTTTLSYADLADCDLVIEAVYEDLGVKQQVFGALDEVVKPGAILASNTST 416
Query: 423 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 482
+DLN + T ++G HFFSPA+VM LLE+VR E+T+ V+ +M + K I+K VV
Sbjct: 417 LDLNRIAGFTKRPADVVGMHFFSPANVMKLLEVVRGEKTAKDVLATVMQLAKTIRKTAVV 476
Query: 483 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAA 542
G C GF NR YS+ A L+ G ++D A+ +FG +GPF++ DLAG + A
Sbjct: 477 SGVCDGFIGNRMIEQYSRQAGFLLEEGCTPQQVDKAVEAFGFAMGPFRMGDLAGNDIGWA 536
Query: 543 TSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRR 602
K P + S DLL + GR G+ G G Y Y G K D P++EE
Sbjct: 537 IRKRRYVEQPQMRY-SQTADLLCEMGRYGQKTGAGWYDYAPG---KRDAIPSPVVEEMVA 592
Query: 603 LSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRG 662
G ++++ EIV +++ +VNE ++LE+GI +ASD+D + G FP +RG
Sbjct: 593 QHRAGLGITARTISDDEIVHRLVYALVNEGAKILEDGIASKASDIDMVYLTGYGFPLWRG 652
Query: 663 GIVFWADAVGANYVYTSLKKWSQL---YGNFFKPSRFLEERATKGIPLSA 709
G + +AD+ G V ++K +++ F++P+ LE A +G +A
Sbjct: 653 GPMCYADSQGLFNVVQTMKAFARNPLDDAGFWEPAPLLERLAAEGRRFTA 702
>gi|365883354|ref|ZP_09422509.1| Enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Bradyrhizobium
sp. ORS 375]
gi|365288201|emb|CCD95040.1| Enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Bradyrhizobium
sp. ORS 375]
Length = 697
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 241/699 (34%), Positives = 387/699 (55%), Gaps = 29/699 (4%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+D + I+T+ +PPVNAL+ + G+ + A +KAIVLT G F G DI F
Sbjct: 10 HDIIGIVTIDSPPVNALSAAVRGGILGNVKAAIEDPTIKAIVLTCGGRTFIAGADITEFG 69
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K ++ V++ IE+ KP++AA+ G ALGGGLE+A+ CH R+A ++L
Sbjct: 70 KPP--------KPPALNDVLSTIENSPKPVIAAIHGTALGGGLEVALACHYRVATRDSKL 121
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
GLPE+ LG++PG TQRLPR VG A++M++ I++ E K GLI+ +V
Sbjct: 122 GLPEVKLGLLPGAGGTQRLPRAVGPELAVKMIVGGDPISAAEAHKSGLIEEIVEGPASGG 181
Query: 189 VSRLWALDIAARRKPWIRSLHRTD-KLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDV 247
V +A + A +P +R L D K+ + R + A K + + A D
Sbjct: 182 VE--FARKVVAENRP-LRKLRDDDSKIAAAKADRSIFTNAVAAITKKSRGLEAPFAAADA 238
Query: 248 IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRK 307
+ I G+ +E + F +L+ D S+ + FFA+R +K+ V + G K R V +
Sbjct: 239 VGYAIDLPFDEGLKREREGFLKLLTSDQSKAQRYAFFAEREAAKIAGVPE-GTKGRKVER 297
Query: 308 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 367
VA+IG G MG GIA + I V L E E L +G+ ++ N RG + D
Sbjct: 298 VAIIGAGTMGGGIAMSFANAGIPVTLIETAEEQLKRGMGIMQKNWEATAARGGIPADAPA 357
Query: 368 NALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 427
+ ++ G + KD D+VIEAV E++ +K+++F +L++ P +LA+NTS ++++
Sbjct: 358 KRMALIDGKVGLENVKDADLVIEAVFETMAVKKEVFGKLDQYAKPGAVLASNTSYLNIDA 417
Query: 428 VGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 487
+ +TS ++G HFFSPA+VM L EIVR ++TS ++ +++ + I KVP VVG C
Sbjct: 418 IAAETSRPQDVLGMHFFSPANVMKLCEIVRADKTSPDALVTAVSIARKIAKVPAVVGVCD 477
Query: 488 GFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEF 547
GF NR + A L+ G ++D+ + FG+P+GPF + DLAG + + K
Sbjct: 478 GFVGNRMLAQRGKQAEKLLFEGALPQQVDAVVTKFGMPMGPFAMGDLAGLDIGWRSRK-- 535
Query: 548 DKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNI 606
DR +S + D L ++GR G+ GKG Y YE GS+ P PDP V +I+E L+ +
Sbjct: 536 -----DRGIKSEIADALCEAGRFGQKTGKGYYKYESGSRAPLPDPDVEKLIDET--LAKL 588
Query: 607 MPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVF 666
G K +V+++EI+E +++P++NE ++L EG+ R SD+D + G +P YRGG ++
Sbjct: 589 --GLKRRNVSDEEILERMMYPMINEGAKILAEGVAARPSDIDVVWLYGYGWPIYRGGPMY 646
Query: 667 WADAVGANYVYTSLKKWSQLYGN-FFKPSRFLEERATKG 704
WAD+VG ++ L ++ + +P+ L++ A +G
Sbjct: 647 WADSVGLKHIAERLSYYANETNDPSLEPAPLLKKLAEEG 685
>gi|334345738|ref|YP_004554290.1| 3-hydroxybutyryl-CoA epimerase [Sphingobium chlorophenolicum L-1]
gi|334102360|gb|AEG49784.1| 3-hydroxybutyryl-CoA epimerase [Sphingobium chlorophenolicum L-1]
Length = 687
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 259/708 (36%), Positives = 378/708 (53%), Gaps = 48/708 (6%)
Query: 18 ITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAG 77
I L +PPVNAL + L A++ D V+AIV+ G G F GG DI F +V
Sbjct: 13 IVLNSPPVNALGGALRRDLAVALRVASADDAVRAIVIRGAGKLFCGGADITEFGQVRAK- 71
Query: 78 DVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELT 137
L+PD+ +N IE KP+VAAV G ALGGGLE+A+GCH RIAA +LGLPE++
Sbjct: 72 --PLLPDL-----INEIESSVKPVVAAVHGSALGGGLEVALGCHYRIAAATAKLGLPEVS 124
Query: 138 LGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRL-W 193
LG++PG TQRLPRLVG+ A++M++L I++ ++GL+D VV E L S + +
Sbjct: 125 LGLLPGAGGTQRLPRLVGVEAALDMIVLGAPISAMRAAEIGLVDEVVDDEVDLAGSAIAF 184
Query: 194 ALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIV 253
A ++ A R+ + ++L AR K+ L A K AC+ I
Sbjct: 185 ARNVGAVRRTRDLPMDAEEQLFEKFAARHARKIDTLDAPK---------ACIAAIRAATE 235
Query: 254 HGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIG 312
GV E +F ELV S+ L H FFA+RA +K+ N+ DI L+P VR+V VIG
Sbjct: 236 LPFGEGVAHERSLFAELVEGAQSKALCHAFFAERAAAKIDNLPADIALRP--VRRVGVIG 293
Query: 313 GGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKM 372
G MG GIA + I V + E L +G+ I AN V RG+L ++A A+ +
Sbjct: 294 AGTMGGGIAMNFLSTGIAVTIVETEQAALDRGVGVIRANYGASVARGRLKAEQAEAAMSL 353
Query: 373 LKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKT 432
L L + + D D+VIEAV E++ +K++IF L++ P +LA+NTS +D++ + T
Sbjct: 354 LTPTLVFEDLADCDLVIEAVYENMEVKKQIFCRLDQVARPGAMLASNTSYLDIDEIASVT 413
Query: 433 SSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVN 492
+ G HFFSPA+VM L+E+VR +TS ++ M + + + KVPVV C GF N
Sbjct: 414 GRPQDVFGLHFFSPANVMKLVEVVRGAQTSLDIVATAMALARKVGKVPVVARVCHGFIGN 473
Query: 493 RAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFP 552
R P A L+ G +ID +FG+P+GPFQ++DLAG + P
Sbjct: 474 RMMHPRKVEAFKLLEEGATPAQIDRVHLNFGMPMGPFQMMDLAGCDIGWHRD-------P 526
Query: 553 DRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKP 612
+R + +++ L GR G+ G G Y Y+ K P P II + R + I+
Sbjct: 527 ERV--TTILEALCAEGRWGQKTGGGFYDYDTERKASPSPVAQAIIADFRERAGIV----S 580
Query: 613 ISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVG 672
++++EI ++ +VNE VLE G R+SD+D + G +P + GG +FWA+ VG
Sbjct: 581 REISDEEITVRTIYTIVNEGAAVLEGGYAQRSSDIDAVGLYGYGWPRHTGGPMFWAEHVG 640
Query: 673 ANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSAPVSSSSTSRAR 720
+ + L+K+S+ G F+ S PL SS TS R
Sbjct: 641 FDTIVAGLEKYSEELGPDFQIS-----------PLIRHAGSSKTSLDR 677
>gi|296136057|ref|YP_003643299.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Thiomonas
intermedia K12]
gi|295796179|gb|ADG30969.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Thiomonas
intermedia K12]
Length = 697
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 246/702 (35%), Positives = 375/702 (53%), Gaps = 26/702 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A++TL NPPVN L + + A + V IV+TG G FSGG DI F K
Sbjct: 12 IAVLTLDNPPVNGFGRQQRRLLVEAIDAAIADSGVIGIVVTGAGALFSGGADIREFGKPE 71
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
L+ V+ + E C KP+VAA+ G +GGGLE A+GCH R+A + LP
Sbjct: 72 SMASPHLLD------VIAVAEACTKPVVAAINGTCMGGGLEFALGCHGRVALASALIALP 125
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 191
E+ LG++PG TQRLPR VGL A+ M++ +++ ++ L DAVV ++++ +
Sbjct: 126 EVKLGLLPGAGGTQRLPRAVGLEHAMNMIVSGEAVPAKMLAATALFDAVV-EDDVVGAAA 184
Query: 192 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 251
+A +A KP R D + A ++ R P+ P C++ + G
Sbjct: 185 AFARHLAESTKPTPRV---RDLAVNHDNAEAFIQFTRTTVAAQFPHEPARLQCVEAVA-G 240
Query: 252 IVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAV 310
+ G+L+E +F L+ S+ L H FFA+RA SK+ +V D +P + +V V
Sbjct: 241 SLKPFNEGMLRERSLFAMLMATPESQALRHAFFAERAASKIGDVPADTPTRP--IARVGV 298
Query: 311 IGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNAL 370
IG G MG GI+ + V L E E L +G+ TI N +GKL ++ + +
Sbjct: 299 IGAGTMGGGISMNFLNAGFPVTLVETTQEALDRGVATIHKNYDNSAKKGKLKPEQVDKRM 358
Query: 371 KMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGE 430
+L+ LD+++ D D+VIEAV E++ +K+ +F L+ P ILA+NTST+DL+ +
Sbjct: 359 ALLRPTLDFAQLADCDLVIEAVFETMEVKRDVFERLDAIAKPGAILASNTSTLDLDAIAA 418
Query: 431 KTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFA 490
T +IG HFFSPA+VM LLE+VR + T+ + +M + K I+K VV G C GF
Sbjct: 419 YTKRPQDVIGMHFFSPANVMKLLEVVRGKATAKDALATVMKLAKTIRKTAVVSGVCDGFI 478
Query: 491 VNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKA 550
NR Y + A LV G ++D A+ ++G+ +GPF++ DLAG + A K
Sbjct: 479 GNRMIEHYGRMANFLVEEGASPQQVDRALEAWGMAMGPFRMGDLAGNDIGWAIRKRRYVE 538
Query: 551 FPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVLPIIEECRRLSNIMPG 609
P+ + S L D L + GR G+ GKG Y YE G++ PDP V +I R+ +
Sbjct: 539 KPNVMY-SRLADRLCEQGRYGQKTGKGWYRYEAGNRAALPDPEVDALITAYRQEIGV--- 594
Query: 610 GKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWAD 669
P + + EIV+ L+ +VNE R+L EGI RASD+D + G FP++RGG + +AD
Sbjct: 595 -TPRKIDDAEIVDRCLYALVNEGARLLAEGIAQRASDIDMVYLAGYGFPAWRGGPMGYAD 653
Query: 670 AVGANYVYTSLKKWSQLYGN---FFKPSRFLEERATKGIPLS 708
+G V +++++ G F++P+ L E A +G S
Sbjct: 654 QIGLAMVVRRMRQFAAQPGGDAAFWQPAPLLAELAEQGKTFS 695
>gi|118590370|ref|ZP_01547772.1| Enoyl-CoA hydratase/isomerase:3-hydroxyacyl-CoA dehydrogenase,
3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein
[Stappia aggregata IAM 12614]
gi|118436833|gb|EAV43472.1| Enoyl-CoA hydratase/isomerase:3-hydroxyacyl-CoA dehydrogenase,
3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein
[Stappia aggregata IAM 12614]
Length = 704
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 251/701 (35%), Positives = 375/701 (53%), Gaps = 48/701 (6%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
V++E+ N V +I L NPPVNA + I +GL + D V+ I L G F G
Sbjct: 16 VSIEI-NGSVGLIALDNPPVNAASHAIRSGLWQAVDTLQQTDGVEVIALYAKGRTFIAGA 74
Query: 66 DINVFQKVHGAGDVSLMP--DVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
DI F K P D + + N IE +PIV + G LGGGLE+AM CHAR
Sbjct: 75 DIREFGK----------PPLDPWLPELCNFIESASRPIVCVLHGTTLGGGLEVAMSCHAR 124
Query: 124 IAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAV 180
+A +++GLPE+TLG++PG TQR PRL G++ A++M+ K + ++E GLID +
Sbjct: 125 VALKGSKVGLPEVTLGILPGAGGTQRAPRLAGIATALDMITSGKPMAADEALSHGLIDRI 184
Query: 181 VTSE----ELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEARE--VLKLARLQAKKT 234
V + L L A D+ R K G L+ + +K R + K+
Sbjct: 185 VEGDPRDIALSSAKDLLAGDLPNR------------KTGELTAEPDPAAIKAMRTKLAKS 232
Query: 235 APNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSR-GLVHVFFAQRATSKVP 293
P + C+D +E H +KE + E M R GL+H FF++RA +K+P
Sbjct: 233 QPLLFSPHKCVDAVEA--CHLPIREGMKEERRLYEECMASPQRAGLIHAFFSERAVTKIP 290
Query: 294 NVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVR 353
T R + V VIGGG MGSGIATA +L + V L E + + L +G+ TI N+
Sbjct: 291 EATATA---REINSVGVIGGGTMGSGIATAILLVGLPVTLTERDQDGLDRGVATITRNLE 347
Query: 354 GLVTRGKLTQDKANNALKM-LKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPP 412
G V RGKL+ + ++ L L D + + D+VIEAV E + +K++IF L+K C P
Sbjct: 348 GAVKRGKLSAEARDDILAAKLTTSTDLAALAEADLVIEAVFEDMGVKREIFQTLDKVCKP 407
Query: 413 HCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTV 472
+LA+NTS +D+N + TS +IG HFFSPAHVM LLE+V ++T A V+ +
Sbjct: 408 GTVLASNTSYLDINEIAATTSRPQDVIGLHFFSPAHVMRLLEVVVADKTGADVVATGFAL 467
Query: 473 GKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLL 532
+ +KK+ V G C GF NR Y ++A ++ G ID+A+R FG +GP+Q+
Sbjct: 468 ARKLKKIAVRSGVCDGFIGNRIMTFYKKTADYMMMDGASPEEIDTAMRGFGFAMGPYQVA 527
Query: 533 DLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTY-EKGSKPKPDP 591
DLAG ++ A +K P P+ D L ++G G+ G+G Y Y ++GS+P P+
Sbjct: 528 DLAGLDISWAANKRRAATRPAEERYIPIADRLCENGWFGRKTGQGFYIYDDQGSRPNPE- 586
Query: 592 SVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDAS 651
L II+ R + + P S TE+EIV + +++E RVLEEGI +R D+D
Sbjct: 587 -ALAIIDAEREKAGVTPR----SFTEEEIVSRFMTAMISEVVRVLEEGIALRPIDIDAVF 641
Query: 652 VLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFK 692
+ G FP +RGG + AD +G + ++++++ ++K
Sbjct: 642 LNGYGFPRFRGGPLHTADVIGPGELVRRIEEYAKEDAYYWK 682
>gi|383643635|ref|ZP_09956041.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingomonas elodea ATCC 31461]
Length = 674
Score = 397 bits (1021), Expect = e-107, Method: Compositional matrix adjust.
Identities = 251/705 (35%), Positives = 372/705 (52%), Gaps = 48/705 (6%)
Query: 7 TMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFD 66
T GN V I+T NPPVNAL + GL+ EEA S D ++A+V+T G F G D
Sbjct: 6 TSRQGN--VLILTSDNPPVNALGAAVRQGLQAGIEEARSDDSIQAVVITCAGKTFFAGAD 63
Query: 67 INVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA 126
I F K M + S+ ++V+ IE KP++AAV G ALGGG E+A+ H RIA
Sbjct: 64 ITEFGKA--------MAEPSLPVLVDQIEALDKPVIAAVHGTALGGGCEVALASHYRIAV 115
Query: 127 PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS 183
P + GLPE+ LG++PG TQR+PR+ G+ A+EM I + + + GL+D +
Sbjct: 116 PSAKFGLPEVKLGILPGAGGTQRMPRVAGVEVALEMATKGDPIPAVQAKEAGLVDRLAGE 175
Query: 184 EELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKK----TAPNMP 239
+ LL + +A ++ KP RS R + +A K AK+ APN
Sbjct: 176 DSLLADAVAFANEVIG--KPVSRSSERPVTV----DAETFAKFRAANAKRFRGLDAPN-- 227
Query: 240 QHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIG 299
+D+IE+ GV E F +L+M S L H+FFA+R +K+ + D
Sbjct: 228 ---TIIDIIEQTAGKPYAEGVQAERMGFMKLIMGQQSAALRHIFFAERKAAKIDGIAD-D 283
Query: 300 LKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRG 359
++ R +R+V VIG G MG GI+ + + V + E+ E L +G + N +G
Sbjct: 284 IQLRDIRRVGVIGAGTMGGGISMNFLSAGVPVTIVEMAQEALDRGTGVMRKNYEASAAKG 343
Query: 360 KLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATN 419
++T ++ A+ +LK L++ + + D++IEAV ES+ +K+ +F L+ P ILA+N
Sbjct: 344 RMTAEQVEKAMGLLKPTLNFDDLAECDLIIEAVYESMDVKKDVFGRLDTIAKPGAILASN 403
Query: 420 TSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKV 479
TS ++++ + TS ++G HFFSPA+VM LLEIVR +T+ V+ M + K IKKV
Sbjct: 404 TSYLNIDEIAAATSRPQDVVGLHFFSPANVMKLLEIVRGAKTADDVLATAMALSKKIKKV 463
Query: 480 PVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGV 539
V+ G C GF NR P A ++ G +ID +FG+P+GPFQ+ DLAG +
Sbjct: 464 AVIAGVCYGFIGNRMLMPRQVEATKMLLEGATPEQIDKVHVAFGMPMGPFQMADLAGVDI 523
Query: 540 AAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEE 599
P+R + D L GR G+ G G Y Y++ +P P V +IEE
Sbjct: 524 GWHRD-------PNRI--ENIRDALAAEGRWGQKKGAGFYDYDEKRQPSNSPRVAELIEE 574
Query: 600 CRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPS 659
R N+ +TE+EIV L+ +VNE +L EG+ RASD+D V G +P
Sbjct: 575 WRGKLNV----PSHEITEEEIVVRTLYTMVNEGALILAEGMAQRASDIDVVWVYGYGWPP 630
Query: 660 YRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
YRGG +FWAD G + L+K+ F+ + L E+A KG
Sbjct: 631 YRGGPMFWADTEGLKKIVEGLEKYG------FEVAPLLREKAEKG 669
>gi|114571197|ref|YP_757877.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Maricaulis maris MCS10]
gi|114341659|gb|ABI66939.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Maricaulis maris MCS10]
Length = 679
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 253/696 (36%), Positives = 382/696 (54%), Gaps = 39/696 (5%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
V ++T NPPVNAL + AGL EA S D +KA+V+T G F G DI F K
Sbjct: 12 VLVVTSNNPPVNALGQAVRAGLAAAMAEAASDDAIKAVVITCEGRTFFAGADITEFGK-- 69
Query: 75 GAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
P V L V++ IE KP+VAA+ G ALGGGLE+A+GCH R+AA +LG
Sbjct: 70 --------PPVGPSLPEVIDAIEASPKPVVAAIHGTALGGGLEVALGCHYRVAAASAKLG 121
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 189
LPE+ LG++PG TQRLPR+VG+ A+ M+ I + ++GL+D +V ++L +
Sbjct: 122 LPEVKLGLLPGAGGTQRLPRVVGVEAALPMIAKGDPIPAAAAERIGLVDKLVADDQLAES 181
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
+A +++ I S RTDKL ++ A + R + +AC++ +
Sbjct: 182 GIAFARSVSSATTHPISS-ARTDKLDTVL-ADDFFDNFRKTELRRLKGFEAPEACIEAVR 239
Query: 250 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKV 308
I GV KE ++F +LV SR L HVFFA+RA K+ ++ D + P + KV
Sbjct: 240 AAIELPFAEGVKKERELFGKLVSGTQSRALRHVFFAERAAGKIDDIPADTPVLP--IAKV 297
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
++G G MG GIA + I V + E + L +G+ I N +RGK T ++
Sbjct: 298 GILGAGTMGGGIAMNFLTAGIAVTILEREQDPLDRGVSIIRKNYERSASRGKFTAEQVEQ 357
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
+ L LD ++ D D+VIEAV E++ +K+ +F++L+ P ILA+NTS ++++ +
Sbjct: 358 CMGRLTPTLDMNDLADCDLVIEAVFENMDVKKDVFTKLDSIVKPGAILASNTSYLNVDEM 417
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
T + ++G HFFSPA+VM LLE+VR E+ S V+ M + K + KV VV G C G
Sbjct: 418 AAMTKRPEFVLGLHFFSPANVMRLLEVVRAEKASPAVLKTAMALAKKVGKVAVVSGVCHG 477
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR P Q+A ++ G+ + +D A+ FG+P+GPFQ+ DLAG + ++
Sbjct: 478 FIGNRMLSPRQQAANAMLMQGITPWAVDDALTDFGMPMGPFQMADLAGLDLG------WN 531
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMP 608
+ D S + D+L + R G+ NGKG Y Y++ + P V +I S
Sbjct: 532 R---DASKGETIRDVLCERDRRGQKNGKGFYDYDENRRRTPSAEVEEVIAAFVAKS---- 584
Query: 609 GGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWA 668
G P S + +EI +LFP++NE ++L+EG+ RASD+D + G +P+Y GG +FWA
Sbjct: 585 GQAPQSFSPEEIRNRLLFPMINEGAKILDEGMAQRASDIDTVWINGYGWPAYTGGPMFWA 644
Query: 669 DAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
D +G + V LK +G+ P +L +RA KG
Sbjct: 645 DTIGLDVVVEGLKA----FGHEVSP--YLADRAAKG 674
>gi|90423729|ref|YP_532099.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Rhodopseudomonas
palustris BisB18]
gi|90105743|gb|ABD87780.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Rhodopseudomonas palustris BisB18]
Length = 697
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 250/700 (35%), Positives = 384/700 (54%), Gaps = 32/700 (4%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+D +AI+T+ +PPVNAL+ + G+ + ++A + V+AIVLT G F G DI F
Sbjct: 10 HDAIAIVTVDSPPVNALSAAVRRGISETVKQAIADPAVQAIVLTCAGRTFIAGADITEFG 69
Query: 72 KVHGAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKT 129
K P S L V+ +E+ KPIVAA+ G ALGGGLE+A+GCH R+A
Sbjct: 70 K----------PPQSPGLGEVITELENSPKPIVAAIHGTALGGGLEVALGCHFRVAVKDA 119
Query: 130 QLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL 186
+LGLPE+ LG++PG TQRLPR VG A++M++ I + E + GLID +V E
Sbjct: 120 RLGLPEVKLGLLPGAGGTQRLPRAVGPELAVKMIVGGDPIGAAEALQHGLIDEIV--EAT 177
Query: 187 LKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLD 246
+A + A ++ R KL + R + A K A + A D
Sbjct: 178 AAGGEAFARKVLAEQRGLRRLRDDDSKLQAAKTDRSIFTQAVASMTKKARGLEAPFAAAD 237
Query: 247 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 306
+ I G+ +E F +LV + S+ + FFA+R +KV +V D G KPR V
Sbjct: 238 AVGAAIDLPFDEGLKQERDGFMKLVTGEQSKAQRYAFFAEREAAKV-SVPD-GTKPRPVA 295
Query: 307 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 366
+VA+IG G MG GIA + I V L E + L +G+ ++ N RG + D
Sbjct: 296 RVAIIGAGTMGGGIAMSFANAGIPVTLIETGEQQLKRGLGVMQKNYDATAARGGIPADAP 355
Query: 367 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 426
+ ++ GV+ KD D+VIEAV E++ +K+++F+ ++ P +LA+NTS ++++
Sbjct: 356 AKRMALINGVVGLEHVKDADLVIEAVFETMAVKKEVFTAIDAYAKPGAVLASNTSYLNID 415
Query: 427 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 486
+ + T + ++G HFFSPA+VM L EIVR ++T+ +L + + + I KVP VVG C
Sbjct: 416 EIAQVTKRPEDVLGMHFFSPANVMKLCEIVRADKTAPDALLTAVAIARKIAKVPAVVGVC 475
Query: 487 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKE 546
GF NR + A L+ G ++D+ + FG+P+GPF + DLAG + + K
Sbjct: 476 DGFVGNRMLAARGKQAERLLFEGALPQQVDAVVTKFGMPMGPFAMGDLAGLDIGWRSRK- 534
Query: 547 FDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSN 605
DR +S + D L ++GR G+ GKG Y YE GS+ P PDP V +I + LS
Sbjct: 535 ------DRGIKSEIADALCEAGRFGQKTGKGYYKYEAGSRAPLPDPEVEALINDT--LSK 586
Query: 606 IMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIV 665
+ G K V+++EI+E +++P++NE R+LEEGI R SD+D + G +P YRGG +
Sbjct: 587 L--GLKRREVSDEEILERMMYPMINEGARILEEGIAARPSDIDVIWLYGYGWPIYRGGPM 644
Query: 666 FWADAVGANYVYTSLKKWSQLYGN-FFKPSRFLEERATKG 704
++AD VG +V L +++ + +P+ L A +G
Sbjct: 645 YYADQVGLKHVAERLSYYAKATNDPTLEPAPLLARLAAEG 684
>gi|355388915|gb|AER62400.1| hypothetical protein [Brachypodium sp. D49c]
Length = 306
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 197/305 (64%), Positives = 243/305 (79%)
Query: 219 EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 278
EARE+LK AR QA+K A N+ C+DVIEEGIV G +G+ KEA F+ L+ DT +
Sbjct: 2 EAREILKFARAQARKQAANLEHPLLCIDVIEEGIVSGPRAGLWKEATTFQVLLFSDTCKS 61
Query: 279 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 338
LVHVFF+QRATSKVP TD+GL PR + KVA++GGGLMGSGIATA IL+N V+LKEVN
Sbjct: 62 LVHVFFSQRATSKVPGATDLGLMPRKITKVAILGGGLMGSGIATAMILSNYPVILKEVNE 121
Query: 339 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 398
++L GI I+AN++ V +GK+T+++ AL ++ G L Y FK+VD+VIEAVIE+V L
Sbjct: 122 KFLNAGIDRIKANLQSRVRKGKMTEERYEKALSLVTGALGYENFKEVDLVIEAVIENVKL 181
Query: 399 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 458
KQ+IF++LEK CP HCILATNTSTIDLN++GEKT SQDRI+GAHFFSPAHVMPLLEIVRT
Sbjct: 182 KQQIFADLEKYCPSHCILATNTSTIDLNLIGEKTKSQDRIVGAHFFSPAHVMPLLEIVRT 241
Query: 459 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 518
+ TSAQV++DL+ VGK IKK P+VVGNCTGFAVNR FFPY+QSA L V G+DV++ID A
Sbjct: 242 QHTSAQVVVDLLDVGKRIKKTPIVVGNCTGFAVNRMFFPYTQSALLFVDYGMDVYKIDRA 301
Query: 519 IRSFG 523
FG
Sbjct: 302 CTKFG 306
>gi|320332993|ref|YP_004169704.1| 3-hydroxybutyryl-CoA epimerase [Deinococcus maricopensis DSM 21211]
gi|319754282|gb|ADV66039.1| 3-hydroxybutyryl-CoA epimerase [Deinococcus maricopensis DSM 21211]
Length = 690
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 246/692 (35%), Positives = 375/692 (54%), Gaps = 25/692 (3%)
Query: 17 IITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGA 76
++T+ NPPVN L+ + GL + A + + V+A+V+ G G F G D+ F G
Sbjct: 13 VLTVNNPPVNVLSPGVPEGLMAGLDAAHANEQVQAVVIVGGGRTFIAGADVRTFSGAEGD 72
Query: 77 GDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPEL 136
PDV ++ ++ +KP++AA+ G ALGGGLE+A+ C R+A P QLGLPE+
Sbjct: 73 A-----PDV--RGLMAALDASEKPVIAAIHGTALGGGLEVALACTYRVAVPDAQLGLPEV 125
Query: 137 TLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLW 193
LG++PG TQRLPRL+G+ A+ +M S++ + +GL+D V+T + LL ++ +
Sbjct: 126 KLGLLPGAGGTQRLPRLIGVEAALSLMTTGDSVSGAQAHAMGLVDEVITGD-LLTGAQAF 184
Query: 194 ALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIV 253
A +AA P R R ++ R ++ A + +D++E
Sbjct: 185 AERVAAA-WPLPRVSERPVNAATVD-----FAAVRAALQQRARGLASPFLIVDLVEASTR 238
Query: 254 HGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGG 313
G+ EA F + SRGL H FFA+R +K+ N G R VR VAVIG
Sbjct: 239 VPFEEGLRLEADAFMRALQTPQSRGLRHAFFAEREAAKI-NGLPKGTPTRDVRSVAVIGA 297
Query: 314 GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKML 373
G MG GIA + V L E E L +G+ I N +G+LT + + +L
Sbjct: 298 GTMGGGIAMNFANAGVPVTLVETQREALDRGLAVIRRNYEQSARKGRLTPQQVEERMGLL 357
Query: 374 KGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTS 433
+ LD ++ D D+VIEAV E++ +K+ +F++L+ P +LATNTST+D++ + T
Sbjct: 358 RPTLDMADIADADLVIEAVFENMDVKKAVFAQLDAHAKPTAMLATNTSTLDVDALAAGTR 417
Query: 434 SQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNR 493
R++G HFFSPA+VM LLE+VR ERT+ V+ +M V + I+KV VVVG C GF NR
Sbjct: 418 DPSRVLGMHFFSPANVMKLLEVVRGERTAPDVLATVMRVARTIRKVGVVVGVCDGFVGNR 477
Query: 494 AFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAA-TSKEFDKAFP 552
Y + A L+ G +D A+ +FGLP+GPF++ D+AG + A + +A
Sbjct: 478 MINAYGREAHQLLVEGASPRDVDDAMHAFGLPMGPFEMSDMAGLDIGYAIRQRHAHEAGL 537
Query: 553 DRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKP 612
DRS ++D L+ GR G+ G G+Y Y G P+PD ++ + R + P P
Sbjct: 538 DRS--DTVLDRLVDLGRKGQKTGAGVYRYADGRTPEPDAVTDDVLTQYRAEQGVTPRDVP 595
Query: 613 ISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVG 672
+EI + +++ +VNE R+LEEG+ RASD+D + G FP+YRGG + +AD VG
Sbjct: 596 ----REEITKRLVYQLVNEGARILEEGVAQRASDIDVIYLYGYGFPAYRGGPMRYADEVG 651
Query: 673 ANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
V ++ +G+ + P+ LE A G
Sbjct: 652 LARVLADIRALHAQHGSTWAPAPLLERLARDG 683
>gi|397733304|ref|ZP_10500023.1| enoyl-CoA hydratase/isomerase family protein [Rhodococcus sp. JVH1]
gi|396930876|gb|EJI98066.1| enoyl-CoA hydratase/isomerase family protein [Rhodococcus sp. JVH1]
Length = 701
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 248/702 (35%), Positives = 375/702 (53%), Gaps = 24/702 (3%)
Query: 3 APRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFS 62
+P V EV DGVA+I L NPPVN L + AGL A + D V A+V+ G G F
Sbjct: 10 SPTVRYEV-CDGVAVIRLANPPVNGLGDTVRAGLASAVARAAADDHVGAVVVVGEGKGFC 68
Query: 63 GGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHA 122
GG D+ F D +L PDV + I KP++AA+ G ALGGGLELA+ CH
Sbjct: 69 GGADLRQFGTPAATADPTL-PDV-----LTTITHSPKPVIAAIHGFALGGGLELALACHY 122
Query: 123 RIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDA 179
RI +LGLPE+ +G+IPG TQRLPRL+G + A+ M+ ++ +LG+ DA
Sbjct: 123 RITHRDAKLGLPEVNVGLIPGSGGTQRLPRLIGAAAALRMIQQGTPVSGARAAELGIADA 182
Query: 180 VVTSEELLKVSRLWALDI-AARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 238
+ L + + P + SL D G +A AR + + N
Sbjct: 183 CFDGDPLGAALDFLRTQVDTSTSGPVVDSLPPADATGIDFDA------ARRPVRPSTRNG 236
Query: 239 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDI 298
+D +E +G+ E F L+ S L HVFFA++ K+ V +
Sbjct: 237 LAQLTAIDAVETATRLPTAAGLAFERAAFLGLLRGPESAALRHVFFAEKTAPKLSGVPPV 296
Query: 299 GLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTR 358
+P + +VAV+G G MGSGIA A + V L E N + L +G + T+
Sbjct: 297 SARP--ISRVAVVGAGTMGSGIAMAFANGGLPVTLIEQNQDALTRGTALVRKTYESSTTK 354
Query: 359 GKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 418
GKLT+ +A + + +++ LD + D+V+EAV E + +K+++F +L+ C P ILA+
Sbjct: 355 GKLTETQARDRIALIEPNLDLDAAAEADLVVEAVFEDMAVKKEVFGKLDAVCKPGAILAS 414
Query: 419 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKK 478
NTS +DL+ + TS +IG HFFSPA++M L+E+VR E T+ V+ +T+ + I K
Sbjct: 415 NTSRLDLDEIARATSRPSDVIGLHFFSPANIMKLVEVVRGEATADDVVATGLTLAQQIGK 474
Query: 479 VPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYG 538
+PV+ C GF NR PY + A L+ G +ID+A+++FG+ +GP + DLAG
Sbjct: 475 IPVLSQVCEGFIGNRMLTPYRREAEFLLEEGATPQQIDAALQAFGMAMGPCAMSDLAGLD 534
Query: 539 VAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPII 597
+A A K P + D L ++GR G+ +G G Y YEKGS+ P PDP+V II
Sbjct: 535 IAWAARKRLAPTRPKDVRYPRVADTLCENGRFGQKSGAGYYRYEKGSRTPVPDPAVDEII 594
Query: 598 EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSF 657
C I + ++T++EI++ + +VNE +L EGI RASD+D V G F
Sbjct: 595 RTCAAEDGI----ERRTITDEEIIDRCVLALVNEGATLLGEGIAQRASDIDVVYVDGYGF 650
Query: 658 PSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEE 699
P++RGG +++A+A+G + ++ + L+G + P+ L +
Sbjct: 651 PAFRGGPMYYAEALGLDVTLQKIRDFENLHGRTWTPAPLLAQ 692
>gi|83859319|ref|ZP_00952840.1| fatty oxidation complex, alpha subunit [Oceanicaulis sp. HTCC2633]
gi|83852766|gb|EAP90619.1| fatty oxidation complex, alpha subunit [Oceanicaulis alexandrii
HTCC2633]
Length = 680
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 254/698 (36%), Positives = 380/698 (54%), Gaps = 36/698 (5%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DGV +I NPPVNAL+ + +GL D A S VKA+V+ +G F G DI F
Sbjct: 8 TDGVLVIVSDNPPVNALSHAVRSGLMDAVTAAGSDAAVKAVVIAADGRTFHAGADITEFG 67
Query: 72 KVHGAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKT 129
K P S L V+ IE KP+VAA+ G LGGGLE+A+G H R+AA +
Sbjct: 68 K----------PPQSPSLPEVIEAIEALDKPVVAALHGTTLGGGLEVALGAHYRVAARGS 117
Query: 130 QLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL 186
+LGLPE+ LG++PG TQRLPR+VG+ A+EM+ I++E+ LGL+D +V +++L
Sbjct: 118 KLGLPEVKLGLLPGAGGTQRLPRVVGVEAALEMIAKGDPISAEKAQSLGLVDELVEADKL 177
Query: 187 LKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLD 246
+ + + P R+ RTDKL + +E A+ A++ M QAC++
Sbjct: 178 -RDAAIAFARARIADGPR-RTGARTDKLSADAEVFHAF--AQKNARRFR-GMDAPQACIE 232
Query: 247 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRG-V 305
++ G+ E ++F +L+ D S L H+FFA+RA +K+ ++ PR V
Sbjct: 233 AVKAATEKPLSEGLKLERELFTKLMTGDQSAALRHLFFAERAAAKIDDIAKD--TPRKTV 290
Query: 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDK 365
V VIG G MG GI + I V L E L +G+ TI N +G+L+QD+
Sbjct: 291 SSVGVIGAGTMGGGITMNFLSAGIPVTLVEREQAALDRGVATIRKNYEASAAKGRLSQDQ 350
Query: 366 ANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL 425
A+ +L L+ D D++IEAV E + +K++IF+ L+ ILATNTS +D+
Sbjct: 351 VEKAMALLTPTLEMDALSDCDLIIEAVFELMRIKKEIFTALDSIAKKDAILATNTSYLDV 410
Query: 426 NIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 485
N + T + ++G HFFSPA++M LLEIVR +T+ V+ M + + I KV VV G
Sbjct: 411 NEIAAVTQRPESVLGLHFFSPANIMKLLEIVRGAKTADTVLATAMDLSRRIGKVAVVAGV 470
Query: 486 CTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSK 545
C GF NR A L+ G + +D + FGLP+GPFQ+ DLAG +
Sbjct: 471 CHGFIGNRMLAQRQAEANSLILEGAKPWDVDRVLVEFGLPMGPFQMADLAGLDIG----- 525
Query: 546 EFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSN 605
+D PD + S + ++L + R G+ G G Y Y++ + P V +I E +
Sbjct: 526 -WD---PDATSSSTVREILCEQDRRGQKTGAGFYDYDQNRRGAPSEHVERLIAEFAEKA- 580
Query: 606 IMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIV 665
G + ++ ++EI E +L+P+VNE ++L+EGI RASD+D V G +P+YRGG +
Sbjct: 581 ---GYEQRAIDDQEIRERLLYPMVNEGAKILDEGIAQRASDIDVVWVYGYGWPTYRGGPM 637
Query: 666 FWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATK 703
FWAD +GA V L+K + + F+ S FL +A +
Sbjct: 638 FWADQIGAKTVLEGLEKHADRLADSFEISPFLRRKAEE 675
>gi|116694675|ref|YP_728886.1| enoyl-CoA hydratase/isomerase family protein [Ralstonia eutropha
H16]
gi|113529174|emb|CAJ95521.1| Enoyl-CoA hydratase/isomerase family [Ralstonia eutropha H16]
Length = 692
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 240/696 (34%), Positives = 375/696 (53%), Gaps = 31/696 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A+++L +PPVNAL+ + +G++D A + D VKA+VL G F G DI F K
Sbjct: 16 IAVLSLDSPPVNALSAAVRSGIRDGMARALADDAVKAVVLICAGKTFVAGADITEFGKPP 75
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
S+ V +IED KP+VAA+ G ALGGGLELA+ CH RIA + GLP
Sbjct: 76 AG--------PSLAEVQAMIEDAPKPVVAAIHGTALGGGLELALVCHYRIATRSAKCGLP 127
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 191
E+ LG++PG TQRLPR+VG +A+EM+ + + ++GL+D + L +
Sbjct: 128 EVNLGLLPGAGGTQRLPRIVGPEQALEMVTSGTHVAASAAAEMGLVDLLTDDASLRADAV 187
Query: 192 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 251
+A + A ++P + DK+ + E+ R + + + IE
Sbjct: 188 AFARKVVAEKRPLRKVRESDDKVAAARGKPELFAAFRKANARRFRGFDAPEFNIRCIEAA 247
Query: 252 IVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK--PRGVRKVA 309
+ +G+ +E ++F EL+ S + FFA R +V NV D+G VR++
Sbjct: 248 VELPFEAGLKRERELFTELLNGTQSAAQRYYFFASR---QVWNVPDVGADTPALAVRRIG 304
Query: 310 VIGGGLMGSGIATAHILNNIY-VVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
++G G MG GIA + LN Y V + E + + L +G+KTI AN +G+L+
Sbjct: 305 IVGAGTMGGGIAM-NFLNAGYPVTIVESSQQALDRGLKTIRANYDNTARKGRLSAADVEA 363
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
+ +L LD D D++IEAV E++ +KQ++F +L++ ILATNTS +D+N++
Sbjct: 364 RMALLTPTLDLQLLADADLIIEAVFENMEVKQELFGKLDRIAKAGAILATNTSALDVNVI 423
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
+S + +IG HFFSPA+VM LLE+VR ++T+ VI M + + I KV +VG C G
Sbjct: 424 AAASSRPEAVIGLHFFSPANVMKLLEVVRGDKTAKPVIRTAMELARKIGKVAALVGVCPG 483
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR + A+ LV G + +D + FG P+GPF + DLAG + K
Sbjct: 484 FVGNRMLAQRQREAQKLVLDGALPWDVDRVLYDFGFPMGPFAMSDLAGLDLGWVREK--- 540
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMP 608
S S L ++L + R G+ G G Y Y++ KP P++E+ R
Sbjct: 541 ------SSGSTLREVLCEMDRRGQKAGAGYYDYDEQRNAKPS----PVVEQVIRDFAAKQ 590
Query: 609 GGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWA 668
G V+E+EI++ ++P++NE ++L+EG +RASD+D V G +P YRGG + +A
Sbjct: 591 GRNSRVVSEQEILDRCIYPMINEGAKILQEGKAIRASDIDVIWVNGYGWPVYRGGPMIYA 650
Query: 669 DAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
D +G + V +++++ LYG F P+ LEE A +G
Sbjct: 651 DTIGLDKVLAAMRRYEALYGADFAPAPLLEELAAQG 686
>gi|148553751|ref|YP_001261333.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingomonas wittichii RW1]
gi|148498941|gb|ABQ67195.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
[Sphingomonas wittichii RW1]
Length = 678
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 252/694 (36%), Positives = 369/694 (53%), Gaps = 45/694 (6%)
Query: 18 ITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAG 77
I + NPPVNAL + GL + E + +V+AIV+ G F G DI+ F K
Sbjct: 14 IMVDNPPVNALGHAVRKGLLEALEAGARQPEVEAIVIACAGRTFFAGADISEFGKPP--- 70
Query: 78 DVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELT 137
++PD+ N IE KP+VAA+ G ALGGGLE+A+ CH R+A P +LGLPE+
Sbjct: 71 LDPILPDL-----CNAIEALAKPVVAAIHGTALGGGLEVALACHYRVAVPSARLGLPEVK 125
Query: 138 LGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWA 194
LG+IPG TQRLPRLVG++ A +M++ I + + +LGL+D V L++ + WA
Sbjct: 126 LGLIPGAGGTQRLPRLVGVAAATDMIVSGDPIPAGKAAELGLVDHVAAEGSLIEEAHRWA 185
Query: 195 LDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKK----TAPNMPQHQACLDVIEE 250
IA RR L RT + +A + + A A+K TAP QAC + +
Sbjct: 186 QVIAGRR-----PLPRTGERPVAGDAAAIDRYAETHARKLRGQTAP-----QACFEALRA 235
Query: 251 GIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAV 310
I G+ E +F++LV D S L H FFA+R +++ + D ++P + V V
Sbjct: 236 AIDLPLAEGLAVERGLFRQLVAGDQSAALRHYFFAERRAARIDGL-DASIEPLPIETVGV 294
Query: 311 IGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNAL 370
IG G MG+GIA A + + VVL E ++ L +G+ I V +G++TQ+ + AL
Sbjct: 295 IGAGTMGAGIAMAFLSKGLRVVLLETGADALDRGLANIRRTYEASVAKGRMTQEAGDQAL 354
Query: 371 KMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGE 430
L LDY+ D++IEAV E + +K+++F+ ++ P ILATNTS +D++ +
Sbjct: 355 ARLSTTLDYAALGGCDLIIEAVFELMAVKREVFARIDAVARPGAILATNTSYLDIDEIAA 414
Query: 431 KTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFA 490
T D ++G HFFSPA++M LLE+VR RTS +V+ M + K I K+ VV GN GF
Sbjct: 415 ATGRPDHVVGLHFFSPANIMKLLEVVRGARTSPRVLATAMALAKRIGKIAVVAGNGYGFI 474
Query: 491 VNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKA 550
NR A L+ GV + ID A FG+P+GPF++ DLAG +
Sbjct: 475 GNRLLARRRSEAFELLLEGVAPWDIDEAHVGFGMPMGPFRMSDLAGVDIG---------W 525
Query: 551 FPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGG 610
D + + D L +GR G+ GKG Y Y++ + P L II+ R G
Sbjct: 526 HRDPARVENVRDALCAAGRLGQKAGKGYYDYDEARQATPSAEALAIIDAFARGQ----GR 581
Query: 611 KPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADA 670
V +I+E L+ +V+E R+L EGI RASD+D V G +PSY GG + WA+
Sbjct: 582 ARRDVPRDDILERTLYAMVDEGARLLAEGIAQRASDIDVVWVNGYGWPSYLGGPMHWAER 641
Query: 671 VGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
G ++ L+ +G P L E+A +G
Sbjct: 642 TGLAHIVERLRA----HGMPVAP--LLAEKAARG 669
>gi|386400122|ref|ZP_10084900.1| 3-hydroxyacyl-CoA dehydrogenase [Bradyrhizobium sp. WSM1253]
gi|385740748|gb|EIG60944.1| 3-hydroxyacyl-CoA dehydrogenase [Bradyrhizobium sp. WSM1253]
Length = 698
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 245/714 (34%), Positives = 389/714 (54%), Gaps = 32/714 (4%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+D V I+T+ +PPVNAL+ + G+ + + A + +K IVLT G F G DI F
Sbjct: 10 HDEVGIVTVDSPPVNALSAAVRGGILECIKAAVADPAIKGIVLTCAGRTFIAGADITEFG 69
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K ++ V++ IE+ KP+VAA+ G ALGGGLE+A+ CH R+A + +L
Sbjct: 70 KPP--------KPPALNDVLSEIENSPKPVVAAIHGTALGGGLEVALACHFRVAVKEAKL 121
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
GLPE+ LG++PG TQRLPR VG A++M++ I + E K GLI+ +V E
Sbjct: 122 GLPEVKLGLLPGAGGTQRLPRAVGPELAVKMIVGGDPIGAAEALKNGLIEEIV--EGPAA 179
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 248
+ + A ++P R K+ + R + A K + + A D +
Sbjct: 180 GGEAFVRKLLAEKRPLRRLRDDDSKIAAAKADRSIFTNAVAAMTKKSRGLEAPFAAADAV 239
Query: 249 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 308
I G+ KE + F +LV D S+ + FFA+R SK+ V + G KPR V +V
Sbjct: 240 GYAIDLPFDEGLKKEREGFLKLVASDQSKAQRYAFFAEREASKIAGVPE-GTKPRPVNRV 298
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
A++G G MG GIA + + V L E E L +G+ ++ N RG + D
Sbjct: 299 AILGAGTMGGGIAMSFANAGVPVTLIETGEEQLKRGMGIMQKNWEATAARGGIPADAPAK 358
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
+ ++ GV+ D D+VIEAV E++ +K+++F +L++ P +LA+NTS ++++ +
Sbjct: 359 RMALINGVVGIENVGDADLVIEAVFETMAVKKEVFGKLDQYVKPGAVLASNTSYLNIDEI 418
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
+ T ++G HFFSPA+VM L EIVR ++T+ ++ +++ + I KVP VVG C G
Sbjct: 419 AKSTKRPQDVLGMHFFSPANVMKLCEIVRADKTAPDALVTAVSIARKIAKVPAVVGVCDG 478
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR + + L+ G ++D+ + FG+P+GPF + DLAG + + K
Sbjct: 479 FVGNRMLAQRGKQSEKLLFEGALPQQVDAVVTKFGMPMGPFAMGDLAGLDIGWRSRK--- 535
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVLPIIEEC-RRLSNI 606
DR +S + D L ++GR G+ GKG Y YE GS+ PDP V +I+E RL
Sbjct: 536 ----DRGIKSEIADALCEAGRFGQKTGKGYYKYEAGSRSALPDPEVEKLIDETLLRL--- 588
Query: 607 MPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVF 666
G K V++ EI+E +++P++NE ++LEEGI R SD+D + G +P YRGG +F
Sbjct: 589 --GRKKRVVSDDEILERMMYPMINEGAKILEEGIAARPSDIDVVWLYGYGWPIYRGGPMF 646
Query: 667 WADAVGANYVYTSLKKWSQLYGN-FFKPSRFLEERATKGIPLSAPVSSSSTSRA 719
WAD VG ++ L +++ + +P+ L++ A +G + S ++TS+A
Sbjct: 647 WADTVGLKHIADRLSFYAKETNDPSLEPAPLLKKLAAEGKTFA---SLAATSKA 697
>gi|163744419|ref|ZP_02151779.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Oceanibulbus indolifex HEL-45]
gi|161381237|gb|EDQ05646.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Oceanibulbus indolifex HEL-45]
Length = 698
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 240/697 (34%), Positives = 376/697 (53%), Gaps = 38/697 (5%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+D + ++ + NPPVNAL+ + GL + + A + + V+A+++ G G F G DI F
Sbjct: 10 HDDIVVLRIENPPVNALSQAVRQGLAEGMDRAEAEEGVRAVMIVGEGRAFIAGADITEFG 69
Query: 72 KVHGAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKT 129
K P + L + N IE +VA++ G++LGGGLE+A+ H RIA P
Sbjct: 70 K----------PPMEPHLPNLCNRIEASPLLVVASMHGVSLGGGLEVALSAHYRIAQPTA 119
Query: 130 QLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEE- 185
++GLPE+ LG+IPG TQRLPRL+G+ A++ + + I + + ++G++D V +
Sbjct: 120 RVGLPEVHLGLIPGAGGTQRLPRLIGVEPALDAITTGRHIKAPQALEMGIVDRVEEGDPQ 179
Query: 186 ---LLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQ 242
L V L LD A R+P I + + + LK R Q
Sbjct: 180 EVGLAYVREL--LDSGAERRP-ICDMPAPAPIDWDAAYEATLKKGRGQISPAE------- 229
Query: 243 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 302
+ ++ G+ G+ E ++F EL+ D +G++H FF++RA S +P + G++P
Sbjct: 230 -AVRAVQAGVEKPFEEGMKAERRIFSELMNTDQRQGMIHAFFSERAVSNLPELK--GVEP 286
Query: 303 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 362
R ++ + VIGGG MG+GIATA +L+ VVL E+ E I N++G + RGK+
Sbjct: 287 RTLKAIGVIGGGTMGAGIATAALLSGFNVVLIEMKDEAAKAAHDRISGNLQGALKRGKID 346
Query: 363 QDKANNAL-KMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 421
Q K + + L DY+ DVD+V+EAV E + +K+++F +L+ C P C+LA+NTS
Sbjct: 347 QAKFDTLTGEALTVSTDYASLSDVDLVVEAVFEDMDVKKQVFGKLDAVCKPGCVLASNTS 406
Query: 422 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 481
+D++ + + TS +IG HFFSPAHVM LLE+V ++T+ V+ +GK + K+ V
Sbjct: 407 YLDVDEIADSTSRPADVIGLHFFSPAHVMKLLEVVVADKTAPDVVATGFALGKALGKISV 466
Query: 482 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAA 541
G C GF NR Y +A +V G ++ID+A+ FG +GPF + DLAG +
Sbjct: 467 RAGVCDGFIGNRILATYRTAADHMVLDGASPYKIDAALEKFGFAMGPFAVADLAGLDIGW 526
Query: 542 ATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEEC 600
AT K +D L + G G+ G+G Y YEKG + P+P + +IEE
Sbjct: 527 ATRKRKAATRHPEERVPTYIDRLCEQGHFGQKTGQGYYIYEKGKRGGTPNPEITRLIEEE 586
Query: 601 RRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSY 660
++ I P T+ EIV + +VNE+ +VLEEGI R D+D + G FP Y
Sbjct: 587 QKERGIT----PREFTDAEIVRRYMSAMVNEAAKVLEEGIAKRPLDIDMTLLFGYGFPRY 642
Query: 661 RGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 697
GG + WAD G V +++ +++ F+KP+ L
Sbjct: 643 WGGPMKWADIQGLPNVLAAIEGFAEKDPWFWKPAPLL 679
>gi|226362027|ref|YP_002779805.1| fatty oxidation complex alpha subunit [Rhodococcus opacus B4]
gi|226240512|dbj|BAH50860.1| fatty oxidation complex alpha subunit [Rhodococcus opacus B4]
Length = 687
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 252/682 (36%), Positives = 366/682 (53%), Gaps = 37/682 (5%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VAII L NPPVN L + G+ A + +V++IVLTG+G FS G DI F
Sbjct: 11 VAIIRLDNPPVNGLGLSTRQGILRDLSRALNSPEVESIVLTGDGKFFSAGADITEFGTPR 70
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
+ + SL V+ +ED KP+VAA+EG GGGLELA+G H R+AA +GLP
Sbjct: 71 SSEEPSL------RTVIAALEDSAKPVVAALEGTCFGGGLELALGAHYRVAAKTATVGLP 124
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMML-----LSKSITSEEGWKLGLIDAVVTSEEL 186
E+TLG++PG TQRLPR++ + A EM+ + + ++ G +L D VV S+ +
Sbjct: 125 EVTLGLVPGAGGTQRLPRVLTVRSAAEMITGGSPRRAGVLAADPGQRL--FDRVVDSDTI 182
Query: 187 LKVSRLWALDIAARRKPWIRSLH--RTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 244
+ + + P IR L + LG L R Q K +
Sbjct: 183 TAAIQFAGEMAVSGKCPRIRDLEVIGDEDLGPL----------RAQLTKRSRGFEAPLVA 232
Query: 245 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT-DIGLKPR 303
LD++E G+ E F ELV D S L H FFA+R K+P + D ++P
Sbjct: 233 LDLVERARSVPFAEGLDAERAAFLELVGGDQSAALRHAFFAERTARKIPGLDPDTTVRP- 291
Query: 304 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQ 363
VR+VAV+G G MG GIA + I V++ E + E L +G+ TI N + V +GKLT
Sbjct: 292 -VREVAVVGAGTMGGGIAMNFLNAGIPVIVLETSQEPLARGLATIRRNYQAQVDKGKLTP 350
Query: 364 DKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI 423
+ + +L+ +DY++ D D+ IEAV E + +K+ +F+EL++ P ILA+NTST+
Sbjct: 351 EAMEQRMGLLRPTVDYADLADCDLAIEAVFEDMDVKRAVFTELDEVMKPGAILASNTSTL 410
Query: 424 DLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVV 483
D++ + T ++G HFFSPA+VM LLEIVR ++T+ V+ + VG+ I KV VV
Sbjct: 411 DVDTIAAFTRRPADVVGMHFFSPANVMTLLEIVRADKTADDVLATVSAVGQRIGKVTVVS 470
Query: 484 GNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAAT 543
G C GF NR Y +A L+ G RIDSAI FG +GP+++ DLAG + A
Sbjct: 471 GVCDGFIGNRMLARYRGAANALLEAGASPERIDSAIEDFGYAMGPYRVGDLAGGDIGWAI 530
Query: 544 SKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVLPIIEECRR 602
K PD + + D L + GR G+ G G Y YE G + P P V ++E R
Sbjct: 531 RKRRYAENPDLP-RDEISDRLCEMGRFGQKTGAGWYDYEPGRRDAIPSPVVAELLESYHR 589
Query: 603 LSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRG 662
+ T +EIV+ ++F +V+E R+L+EGI +RASD+D + G FP +RG
Sbjct: 590 EKRT----RRQDFTPEEIVQRLVFALVDEGARILDEGIALRASDIDVVYLAGYGFPRHRG 645
Query: 663 GIVFWADAVGANYVYTSLKKWS 684
G +F+A VG V +L+ +
Sbjct: 646 GPMFYAGTVGLATVEQALRTFD 667
>gi|374572763|ref|ZP_09645859.1| 3-hydroxyacyl-CoA dehydrogenase [Bradyrhizobium sp. WSM471]
gi|374421084|gb|EHR00617.1| 3-hydroxyacyl-CoA dehydrogenase [Bradyrhizobium sp. WSM471]
Length = 698
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 242/712 (33%), Positives = 385/712 (54%), Gaps = 29/712 (4%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+D V I+T+ +PPVNAL+ + G+ + + A + +K IVLT G F G DI F
Sbjct: 10 HDEVGIVTVDSPPVNALSAAVRGGILECIKAAVADPAIKGIVLTCAGRTFIAGADITEFG 69
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K ++ V++ IE+ KP+VAA+ G ALGGGLE+A+ CH R+A + +L
Sbjct: 70 KPP--------KPPALNDVLSEIENSPKPVVAAIHGTALGGGLEVALACHFRVAVKEAKL 121
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
GLPE+ LG++PG TQRLPR VG A++M++ I + E K GLI+ +V E
Sbjct: 122 GLPEVKLGLLPGAGGTQRLPRAVGPELAVKMIVGGDPIGAAEALKNGLIEEIV--EGPAA 179
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 248
+ + A ++P R K+ + R + A K + + A D +
Sbjct: 180 GGEAFVRKLLAEKRPLRRLRDDDSKIAAARADRSIFTNAVAAMTKKSRGLEAPFAAADAV 239
Query: 249 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 308
I G+ KE + F +LV D S+ + FFA+R SK+ V + G KPR V +V
Sbjct: 240 GYAIDLPFDEGLKKEREGFLKLVASDQSKAQRYAFFAEREASKIAGVPE-GTKPRPVNRV 298
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
A++G G MG GIA + + V L E E L +G+ ++ N RG + D
Sbjct: 299 AILGAGTMGGGIAMSFANAGVPVTLIETGEEQLKRGMGIMQKNWEATAARGGIPADAPAK 358
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
+ ++ GV+ D D+VIEAV E++ +K+++F +L++ P +LA+NTS ++++ +
Sbjct: 359 RMALINGVVGIENVGDADLVIEAVFETMAVKKEVFGKLDQYVKPGAVLASNTSYLNIDEI 418
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
+ T ++G HFFSPA+VM L EIVR ++T+ ++ + + + I KVP VVG C G
Sbjct: 419 AKSTKRPQDVLGMHFFSPANVMKLCEIVRADKTAPDALVTAVNIARKIAKVPAVVGVCDG 478
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR + + L+ G ++D+ + FG+P+GPF + DLAG + + K
Sbjct: 479 FVGNRMLAQRGKQSEKLLFEGALPQQVDAVVTKFGMPMGPFAMGDLAGLDIGWRSRK--- 535
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVLPIIEEC-RRLSNI 606
DR +S + D L ++GR G+ GKG Y YE GS+ PDP V +I+E RL
Sbjct: 536 ----DRGIKSEIADALCEAGRFGQKTGKGYYKYEAGSRSALPDPEVEKLIDETLLRL--- 588
Query: 607 MPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVF 666
G K V++ EI+E +++P++NE ++LEEGI R SD+D + G +P YRGG +F
Sbjct: 589 --GRKKRVVSDDEILERMMYPMINEGAKILEEGIAARPSDIDVVWLYGYGWPIYRGGPMF 646
Query: 667 WADAVGANYVYTSLKKWSQLYGN-FFKPSRFLEERATKGIPLSAPVSSSSTS 717
WAD VG ++ L +++ + +P+ L++ A +G ++ + S +
Sbjct: 647 WADTVGLKHIADRLSFYAKETNDPSLEPAPLLKKLAAEGKTFASLAAGSKAA 698
>gi|351732218|ref|ZP_08949909.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Acidovorax radicis
N35]
Length = 699
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 256/703 (36%), Positives = 385/703 (54%), Gaps = 31/703 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA+IT+ NPPVN L + G+ D A + V +I++TG GG FSGG DI F
Sbjct: 11 VAVITMANPPVNGLGLATRQGIVDGLSRANADPAVTSIIITGAGGAFSGGADIKEF---- 66
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G + + ++ V+ IE+ KP+VAA+ +A+GGGLELA+GCH RIAAP + LP
Sbjct: 67 --GTDKSLQEPNLLSVIAAIENSAKPVVAAMHSVAMGGGLELALGCHYRIAAPGCSIALP 124
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSE-----EGWKLGLIDAVVTSEEL 186
E+ LG+IPG TQRLPR++G+ A+ +++ + + SE G KL ++E L
Sbjct: 125 EVKLGLIPGAGGTQRLPRVIGVEAALNLIVSGEPVKSEMIAGVPGQKL-FDKLAASAESL 183
Query: 187 LKVSRLWALDIA-ARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACL 245
+ +A +A AR P +R+ E + AR K A N P C+
Sbjct: 184 AAEALAFAQSVADARPLPLVRNFPCKH-----PEGDAYFQFARNMVKGMAKNFPAPAKCV 238
Query: 246 DVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGV 305
D +E G+L E ++F L+ SR L H+F A+RA SK+P+V K R +
Sbjct: 239 DAVEAATKKKFAEGMLVEREIFINLMWTPESRALRHLFMAERAASKIPDVASDTPK-RDI 297
Query: 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDK 365
+ V VIG G MG GI+ + I V + E+ E L +GI TI+ N V +GKL QDK
Sbjct: 298 KLVGVIGAGTMGGGISMNFLNAGIPVKILEMKQEALDRGIATIKKNYEAQVKKGKLKQDK 357
Query: 366 ANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL 425
+ + +L L Y +FKD D++IEAV E + +K+ +F +L+ P ILA+NTST+D+
Sbjct: 358 YDQRMALLSTTLSYDDFKDCDLIIEAVFEEMGVKEAVFKQLDAVAKPGAILASNTSTLDV 417
Query: 426 NIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 485
+ + T ++G HFFSPA+VM LLE+VR + T+ V+ +M +GK IKK VV G
Sbjct: 418 DKIAAFTKRPQDVVGMHFFSPANVMKLLEVVRGKETAKDVLATVMAIGKKIKKTSVVSGV 477
Query: 486 CTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSK 545
C GF NR YS+ A L+ G ++D A+ FG +GPF++ DLAG + A K
Sbjct: 478 CDGFIGNRMIEQYSRQAGFLLDEGCTPQQVDKAVEKFGFAMGPFRMGDLAGNDIGWAIRK 537
Query: 546 EFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVLPIIEECRRLS 604
D + S D L + GR G+ G G Y Y+ G + P V +IE+ R+
Sbjct: 538 RRSVERADMKY-SRTADKLCELGRFGQKTGAGWYDYQAGKRDAIPSDLVNKMIEDHRKEL 596
Query: 605 NIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGI 664
I P ++++EIV+ ++F +VNE +LE+GI ++ D+D + G FP +RGG
Sbjct: 597 GITPR----KISDEEIVQRLVFALVNEGAHILEDGIASKSGDIDMVYLTGYGFPIHRGGP 652
Query: 665 VFWADAVGANYVYTSLKKWSQLYGN---FFKPSRFLEERATKG 704
+ +A VG V ++ ++++ + F+KP+ L + A +G
Sbjct: 653 MHYASEVGLFNVVQAMDRFAKNPNDDATFWKPAPLLAKLAAEG 695
>gi|119474779|ref|ZP_01615132.1| fatty oxidation complex, alpha subunit [marine gamma
proteobacterium HTCC2143]
gi|119450982|gb|EAW32215.1| fatty oxidation complex, alpha subunit [marine gamma
proteobacterium HTCC2143]
Length = 694
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 243/698 (34%), Positives = 379/698 (54%), Gaps = 30/698 (4%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVAI+T+ NPPVNAL+ + AGL D +A + D+V AIVL G F G DI F
Sbjct: 14 DGVAILTVDNPPVNALSSGVRAGLSDGVAQAAADDNVTAIVLICAGRTFIAGADITEF-- 71
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
G + P S+ + +E+C KPIVAA+ G LGGGLE A+ CH R++ K + G
Sbjct: 72 ----GGKATGP--SLHEALEAMENCSKPIVAAIHGTVLGGGLETALVCHYRVSDAKARFG 125
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 189
LPE+ LG++PG TQRLPR+VG+ KA++M+ I ++E GLI +VT +L
Sbjct: 126 LPEVKLGLLPGAGGTQRLPRVVGVEKALQMVTSGDQIGADEALASGLISEIVT--DLRGD 183
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
+ +A + A KP +R + ++ + E+ R + + + + IE
Sbjct: 184 AIAFAKKVVAEGKPLVRIRDQNAEIDAAKAKPELFSNIRKAIARKSRGFKAPEYNIRCIE 243
Query: 250 EGIVHGGYSGVLK-EAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 308
+ + LK EA +F+EL+ S H FFA+R +K+P+V + + V
Sbjct: 244 AAVNSDNFDDGLKVEADLFRELMTGGQSAAQRHFFFAERQAAKIPDVPKETPEIE-INSV 302
Query: 309 AVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 367
VIG G MG GI + +ILN V + E E L +GI + N +G+++Q
Sbjct: 303 GVIGAGTMGGGI-SMNILNIGTPVTIVETTQEALDRGIAIVRKNYENTAKKGRISQQDVE 361
Query: 368 NALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 427
+ + +L G L+ + D D+VIEAV E++ +K++IF++L+K ILA+NTS +D+N
Sbjct: 362 DRMALLTGSLNIEDLADCDLVIEAVFENMKVKKEIFAKLDKIVKQGAILASNTSALDVNE 421
Query: 428 VGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 487
+ T + +IG HFFSPA+VM LLE+VR +++S VI M K I KV +VG C
Sbjct: 422 IASATVRPESVIGLHFFSPANVMKLLEVVRGDKSSHPVIKTSMAFAKRIGKVAALVGVCP 481
Query: 488 GFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEF 547
GF NR P Q A+ L+ G ++D + FG P+GPFQ+ DLAG + +
Sbjct: 482 GFVGNRILAPRQQQAQQLILEGALPHQVDKVLFDFGKPMGPFQMSDLAGLDIGWSEETSN 541
Query: 548 DKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIM 607
K L D L+++GR G+ G Y Y++ P P P + II E +
Sbjct: 542 GKEV--------LRDRLVEAGRRGQKTSAGYYDYDENRVPSPSPEIEKIILEFSEKN--- 590
Query: 608 PGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFW 667
G ++++EI+ ++P++NE ++LEEGI +R+SD+D V G +P YRGG +F+
Sbjct: 591 -GKTRREISDEEILIRCIYPMINEGAKILEEGIAIRSSDIDVVWVYGYGWPIYRGGPMFY 649
Query: 668 ADAVGANYVYTSLKKWSQLYGN-FFKPSRFLEERATKG 704
D++G + +++ + G+ ++P+ + + A +G
Sbjct: 650 GDSIGLPKIVAKMRELKEQTGDPMWEPAALMVKLAEEG 687
>gi|357973934|ref|ZP_09137905.1| fatty oxidation complex, alpha subunit [Sphingomonas sp. KC8]
Length = 679
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 253/703 (35%), Positives = 372/703 (52%), Gaps = 34/703 (4%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
+T E D V ++ NPPVNAL + GL EEA + VKA+V+ +G F G
Sbjct: 3 ITTERTGD-VLVVVSNNPPVNALGHAVRLGLAKAIEEAAADPAVKAVVIRCDGRTFFAGA 61
Query: 66 DINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA 125
DI F K M D + ++ +E KP+VAA+ G ALGGGLE A+ CH RIA
Sbjct: 62 DITEFGKP--------MQDPQLPEMLEALEASGKPVVAAIHGTALGGGLETALACHYRIA 113
Query: 126 APKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 182
P ++GLPE+ LG++PG TQRLPR+VG + A+EM++ I +++ +GLID + T
Sbjct: 114 VPSAKMGLPEVKLGILPGAGGTQRLPRVVGAAAALEMIVGGAPIGAKKALDVGLIDRLAT 173
Query: 183 SEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQ 242
L + +A +IA +R L RT + +++E V + R + +
Sbjct: 174 EGNLAAEAIAFAQEIAD-----VRPLPRTSEKTAVAEPG-VFEAFRAANARKMKGFEAPE 227
Query: 243 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLK 301
AC+ I+ + G+ E + K LV D S+ H+FFA+RA +KV + D L
Sbjct: 228 ACITAIKAAVELPFAEGLEVERGLIKTLVASDQSKAQRHIFFAERAAAKVDGLPADTPLI 287
Query: 302 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 361
P V+ V VIG G MG GIA + I V + E+ E L +G+ T+ N V G++
Sbjct: 288 P--VQSVGVIGAGTMGGGIAMNFLSIGIPVTILEMKQEALDRGVATVAKNYANNVKSGRM 345
Query: 362 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 421
TQ++A+ A+ +LK L Y + D++IEAV E++ +K+++F++L+K ILA+NTS
Sbjct: 346 TQEQADKAVALLKPTLSYDDLGAADLIIEAVFENMDVKKEVFAKLDKVAKAGAILASNTS 405
Query: 422 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 481
+D++ + TS + ++G HFFSPA+VM LLE+VR +TS V+ M++ K IKK+ V
Sbjct: 406 YLDVDEIAAVTSRPEYVLGMHFFSPANVMKLLEVVRGAKTSDSVLATAMSLAKSIKKIAV 465
Query: 482 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAA 541
V G C GF NR P A L+ G +D FG P+GPFQL DLAG +
Sbjct: 466 VAGVCYGFIGNRMLKPRQDQAGQLILEGAKPSDVDRVFLDFGFPMGPFQLADLAGLDIGW 525
Query: 542 ATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECR 601
D + + + + L GR G+ +G G Y Y++ + P P II E
Sbjct: 526 HR---------DPTRRETVREALCAEGRLGQKSGSGFYDYDEKRQRTPSPVAEKIIAEYA 576
Query: 602 RLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYR 661
I +++ E+ E L+ +VNE +VLEEG RASD+D V G +P Y
Sbjct: 577 ASKGIAQR----VISDDEVRERCLYTLVNEGAKVLEEGKAQRASDIDVVWVFGYGWPVYL 632
Query: 662 GGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
GG + WAD +G V LK+ + G F S L +A KG
Sbjct: 633 GGPMKWADQIGLKTVVDGLKRQADRLGPDFTISPLLAAKAEKG 675
>gi|121596028|ref|YP_987924.1| 3-hydroxyacyl-CoA dehydrogenase [Acidovorax sp. JS42]
gi|120608108|gb|ABM43848.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein [Acidovorax
sp. JS42]
Length = 705
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 242/696 (34%), Positives = 370/696 (53%), Gaps = 24/696 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
V ++++ NPPVNAL + AGL E+A V+A+++ G G F G DI F K
Sbjct: 18 VLVVSINNPPVNALGQAVRAGLLAAVEQAEGDAAVRALLIVGEGKAFIAGADIREFGK-- 75
Query: 75 GAGDVSLMPDV--SVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
P V S+ V N +E C K +VAA+ G ALGGGLE+A+ H R+A P LG
Sbjct: 76 --------PQVPPSLPEVCNRLESCGKLVVAAIHGAALGGGLEVALSAHYRLALPAASLG 127
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 189
LPE+ LG++PG TQR PRL+G+ A E+ML K ++++ GL+D +V + +
Sbjct: 128 LPEVNLGLLPGAGGTQRAPRLMGVKAAAELMLSGKHLSAKAAAAAGLVDRLVEGTDPVAA 187
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
+A ++ A+ R+ R K+ + A L L+ K + ++ +
Sbjct: 188 GLAYANELLAQGAQPRRT--RDLKIADQAAALAELDALALETAKKTRGLFSPGKIVECVR 245
Query: 250 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 309
+ G+ KE +F E + +GLVH FFA+R T+K+P PR K+A
Sbjct: 246 AAVELPFDEGIAKERALFVECLNSPQRQGLVHAFFAERETAKIPEAQ--AAAPRHFAKIA 303
Query: 310 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 369
+IGGG MG+GI A + + V + E ++E + +G K +E GL+ +G++T +
Sbjct: 304 IIGGGTMGAGITVAALDAGLTVTMIERDAESIARGQKNVEKVYDGLIAKGRMTAEGKAAI 363
Query: 370 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 429
L Y + DVD+VIEAV E + +K+ +F EL++ C P +LATNTS +D++ +
Sbjct: 364 LARYTPSTRYDDIADVDLVIEAVFEDLEVKKAVFKELDRVCKPGAVLATNTSYLDIDAIA 423
Query: 430 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 489
TS +IG HFFSPA++M LLEIV + + V+ + K +KKVPV G C GF
Sbjct: 424 AVTSRPQDVIGLHFFSPANIMKLLEIVVPAKVAPDVVTTAFALAKKMKKVPVRAGVCDGF 483
Query: 490 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDK 549
NR Y Q+A L+ G + ID A+R FG +GPFQ+ DLAG + AT K
Sbjct: 484 IGNRILAVYKQAADYLMEDGASPYEIDEAVRGFGFAMGPFQVTDLAGGDIGWATRKRRAA 543
Query: 550 AFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIMP 608
++ + D + + G G+ G+G Y Y +G++ +PDP VL I++ R I
Sbjct: 544 TRDPQARYVEVADRVCERGWFGQKTGRGFYLYPQGARVGQPDPEVLAIVDAERAKKGIT- 602
Query: 609 GGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWA 668
P T EI+ + +VNE +V++EGI +R D+D + G FP +RGG + WA
Sbjct: 603 ---PRQFTADEIMRRYMAAMVNEGAKVVQEGIALRPLDVDVTFLSGYGFPRWRGGPMKWA 659
Query: 669 DAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
D G + V ++ + + F+KP+ LE+ +G
Sbjct: 660 DMTGLDKVLADIRAFEKEDPLFWKPAPLLEQLVAEG 695
>gi|226355857|ref|YP_002785597.1| peroxisomal bifunction [Deinococcus deserti VCD115]
gi|226317847|gb|ACO45843.1| putative Fatty acid oxidation complex subunit alpha [Deinococcus
deserti VCD115]
Length = 692
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 252/699 (36%), Positives = 373/699 (53%), Gaps = 28/699 (4%)
Query: 9 EVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDIN 68
++ D + ++++ NPPVNA + + GLK + A + D V+A+V+ G+G F G DI
Sbjct: 6 QIRQDDILVLSINNPPVNAFSPGVPEGLKAGLDAAQADDTVRAVVIIGSGRTFVAGADIK 65
Query: 69 VFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPK 128
F PD+ V ++ KP VAA+ G ALGGGLELA+ C R+A P
Sbjct: 66 TFNMPR-----EQAPDLRG--TVEKLDRFPKPTVAAIHGTALGGGLELALACTYRVAVPD 118
Query: 129 TQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEE 185
QLGLPE+ LGV+PG TQRLPR+VG +K +EMML I E +LGL+D +V +
Sbjct: 119 AQLGLPEVKLGVLPGAGGTQRLPRVVGAAKGLEMMLSGNPIRGAEARELGLVDELVQGDL 178
Query: 186 LLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACL 245
L R AR P R R+ + GS EV AR KKT +
Sbjct: 179 LEGAVRFARAHADAR--PLPRISERSVEGGSP----EVFAAARESIKKTHRGQLSPSLII 232
Query: 246 DVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGV 305
D+ E +G EA+ F + SRGL H+FFA+R ++K+P ++ +
Sbjct: 233 DLAEMAATQPFQTGWEAEAEKFMQAKDSPQSRGLRHIFFAERESAKIPGLSK-DTPTLDI 291
Query: 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDK 365
R V +IG G MG GIA + I V + E E L +G+ I N +G++T +
Sbjct: 292 RSVGIIGAGTMGGGIAMNFLNVGIPVTIVETAQEALDRGLGVIRRNYENSAKKGRMTMED 351
Query: 366 ANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL 425
+ +L L+ + D D++IEAV E++ +K++IF++L+ P ILATNTST+D+
Sbjct: 352 VEKRMALLTPTLNMEDLADADIIIEAVFENMDVKKEIFTKLDAIAKPGAILATNTSTLDV 411
Query: 426 NIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 485
N + T + +IG HFFSPA+VM LLEIVR ++TS V+ M + K I+KV VVVG
Sbjct: 412 NEIASVTGRPESVIGLHFFSPANVMKLLEIVRADKTSDSVLATSMALAKKIRKVGVVVGV 471
Query: 486 CTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSK 545
C GF NR Y AR +V G +D+++ + GLP+GPFQ+ D+AG + A +
Sbjct: 472 CDGFVGNRMIHRYGDEARKIVEEGAAPQDVDASMNALGLPMGPFQMSDMAGLDIGYAIRQ 531
Query: 546 EFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRL 603
K R P +D +++ GR G+ G G+Y Y++ KP+P+ + +I R
Sbjct: 532 HQAKV---RGEPKPDGWLDRIVERGRKGQKTGAGIYDYDEQRKPRPNDEMEELISSYRAE 588
Query: 604 SNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGG 663
I P ++++E + + + +VNE ++LEEGI RA D+D + G FP+YRGG
Sbjct: 589 KGIT----PREISQEESTKRLAYSLVNEGAKILEEGIAQRAGDIDVIYIYGYGFPAYRGG 644
Query: 664 IVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERAT 702
+ +AD +G V L+K+ Q + R EE T
Sbjct: 645 PMQYADEMGLQNVVADLEKYGQTPAPLLR--RLAEEGKT 681
>gi|355388911|gb|AER62398.1| hypothetical protein [Aegilops speltoides subsp. speltoides]
Length = 304
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/304 (64%), Positives = 244/304 (80%)
Query: 206 RSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAK 265
+SL++TDKL L EARE+LK AR QA+K A N+ C+DVIEEGIV G +G+ KEA
Sbjct: 1 KSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLVCIDVIEEGIVSGPRAGLWKEAN 60
Query: 266 VFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHI 325
F+ L+ DT + L+HVFF+QRATSKVP TD+GL PR + KVA++GGGLMGSGIATA I
Sbjct: 61 AFQSLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKITKVAILGGGLMGSGIATAMI 120
Query: 326 LNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 385
L+N V+LKEVN ++L GI I+AN++ V +GK+T+++ AL ++ G L Y +FK+V
Sbjct: 121 LSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEKALSLVTGALGYEKFKEV 180
Query: 386 DMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFS 445
D+VIEAVIE+V LKQ+IF++LEK CP HCILATNTSTIDLN++GEKT SQDRI+GAHFFS
Sbjct: 181 DLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIGEKTKSQDRIVGAHFFS 240
Query: 446 PAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLL 505
PAHVMPLLEIVRT+ TSAQV++DL+ VGK IKK P+VVGNCTGFAVNR FFPY+QSA L
Sbjct: 241 PAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGFAVNRMFFPYTQSALLF 300
Query: 506 VSLG 509
V G
Sbjct: 301 VDYG 304
>gi|389695783|ref|ZP_10183425.1| 3-hydroxyacyl-CoA dehydrogenase [Microvirga sp. WSM3557]
gi|388584589|gb|EIM24884.1| 3-hydroxyacyl-CoA dehydrogenase [Microvirga sp. WSM3557]
Length = 695
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 246/693 (35%), Positives = 376/693 (54%), Gaps = 25/693 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA+I + NPPVNA + + AGL EA S ++A+V+ G F G DI F +V
Sbjct: 20 VALIEIDNPPVNATSQAVRAGLLAAIREADSDPRIEAVVIACAGKTFVAGADIREFGQVP 79
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
+PDV +N IE C KP+VAA++G ALGGG E+A+ CHAR+A P LGLP
Sbjct: 80 RE---PHLPDV-----INAIEACSKPVVAAIQGTALGGGCEIALACHARVAEPGASLGLP 131
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 191
E+ LG++PG TQRLPRLVGL A++++ + + + E +LGLID + +S +L + +
Sbjct: 132 EVKLGLVPGAGGTQRLPRLVGLEAALDLVTGGRPVRAPEALRLGLIDRL-SSGDLRQDAM 190
Query: 192 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 251
A ++ +P R+ R+ + L K+A ++ K P A L ++
Sbjct: 191 ALARELIG--QPLRRTGERS--VAPLDAETASAKVAEIRKKARGAEAPGKAAELVLLAAN 246
Query: 252 IVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVI 311
+ G+ +E + F EL S L H FF +R ++P + + +PR ++KV ++
Sbjct: 247 LPL--QDGMARERETFLELRSSAQSAALRHAFFGEREVMRLPGLDSV--EPRPIQKVGIV 302
Query: 312 GGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALK 371
G G MGSGIA A V + E + + L G + V G++T + LK
Sbjct: 303 GAGTMGSGIAIAFADAGFDVRIVETSEQALSAGQARVTDVYDKQVASGRITPAAQDERLK 362
Query: 372 MLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEK 431
+ + S D D+VIEAV E + +K+ +F +L+ PP ILATNTS +D++++
Sbjct: 363 AIGYAIGTSSLLDRDLVIEAVFEDLEVKRALFRDLDAILPPGTILATNTSYLDVSLIAAA 422
Query: 432 TSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAV 491
TS ++G HFFSPAHVM LLEIVRT+ T+A V+ + + K ++K+PVV C GF
Sbjct: 423 TSRPADVVGLHFFSPAHVMKLLEIVRTDATAADVVATGLALAKRLRKIPVVCRVCDGFVG 482
Query: 492 NRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAF 551
NR Y Q A L+ G +D+A+ +FG P+GPF + DLAG + A K
Sbjct: 483 NRILSRYRQQAEYLLEEGALPHEVDAALEAFGFPMGPFAVSDLAGLDINWARRKRLAPTR 542
Query: 552 PDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGK 611
R + D L ++GR G+ G G Y YE G + + DP+V ++EE S+ G
Sbjct: 543 DPRERYVDIADRLCEAGRFGRKTGAGWYRYEDGKR-EIDPAVTALVEE----SSQRRGLT 597
Query: 612 PISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAV 671
+++ EI I +VNE+C++L+E IV R D+D + G +P++RGG +F AD V
Sbjct: 598 RRAISADEIQSRIRAAIVNEACKILDERIVERPLDVDVVMMHGYGYPAWRGGPLFEADRV 657
Query: 672 GANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
G + +K+ + G ++P++ L +RA G
Sbjct: 658 GLQPILAQVKERAAQDGPGWEPAKGLVDRAASG 690
>gi|393776806|ref|ZP_10365100.1| 3-hydroxyacyl-CoA dehydrogenase [Ralstonia sp. PBA]
gi|392716163|gb|EIZ03743.1| 3-hydroxyacyl-CoA dehydrogenase [Ralstonia sp. PBA]
Length = 698
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 244/686 (35%), Positives = 378/686 (55%), Gaps = 22/686 (3%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
+ +E +A+I + +PPVN+L L + + A + +V AIVL G G FS G
Sbjct: 6 LKLEGSRASIAVIRIDSPPVNSLGHATRTALAESIQAAHAAKEVDAIVLIGAGKLFSAGA 65
Query: 66 DINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA 125
DI F + +V PD+S EL+ LIE KP+VAA+ G+A+GGGLELA+GCHAR+A
Sbjct: 66 DIREFDR----PEVWKSPDLS-ELIA-LIERGPKPVVAAIHGMAMGGGLELALGCHARVA 119
Query: 126 APKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 182
L LPE+ LG++PG TQRLPRL GL++A++M++ + T+ E L+D V+
Sbjct: 120 THNALLALPEVKLGLLPGAGGTQRLPRLAGLTRALDMIVSGEPQTAAELQGTPLLDQVIE 179
Query: 183 SEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQ 242
E +L + A+ +A + + + + A L AR Q + P P +
Sbjct: 180 HEHVLLPA---AVALAEQMGEHGERPMASARTVTAENADLQLAAAREQVARRTPREPAKR 236
Query: 243 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLK 301
C+D +E ++ + + +E F EL SR L H+FFA+R + + ++ D ++
Sbjct: 237 RCIDAVEASLLLPFEAALERELAYFHELSASPESRALRHLFFAERTAASISDIPKDTPVR 296
Query: 302 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 361
P + AV+G G MG+GIA + I V L E + L +G+ +I + +G++
Sbjct: 297 P--IHSAAVVGAGTMGAGIAQCLLDAGIPVKLLEASRAALDRGVASITRQYQRARDKGRI 354
Query: 362 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 421
+ LK+L VLDY+ DVD+VIEAV E +K K+F L+ P ILATNTS
Sbjct: 355 DDARMAARLKLLTPVLDYAALGDVDIVIEAVFEQFDVKSKVFQSLDAVMKPGAILATNTS 414
Query: 422 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 481
+D+N + T +IG HFFSPAHVM LLE+VR E+T A V++ +M + K + K V
Sbjct: 415 MLDINRLAATTGRAGDVIGTHFFSPAHVMRLLEVVRGEQTRADVLVTVMRLAKKLGKTAV 474
Query: 482 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAA 541
V C GF NR Y + A L+ G ++D A+ FGL +GPF++ D+AG +
Sbjct: 475 VARVCDGFIGNRMIEQYLRQAGFLLEEGATPAQVDRAVEQFGLAMGPFRMSDMAGNDIGY 534
Query: 542 ATSKEFDKAFPDRSFQSPLVDLLLKS-GRNGKANGKGLYTYEKGS-KPKPDPSVLPIIEE 599
K + P F S + DLL+++ R G+ G+G Y Y++GS + P V +I +
Sbjct: 535 DIRKRRSRETPS-LFYSRIPDLLVETLDRKGQKVGRGWYDYQEGSYQAIPSAEVDDMIVQ 593
Query: 600 CRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPS 659
R+ N+ + ++++EIV+ +++ +VNE R+L++G RASD+D A G FP
Sbjct: 594 FRKAHNL----QARQISDEEIVKRLVYALVNEGYRILDDGTAQRASDIDVAYATGYGFPD 649
Query: 660 YRGGIVFWADAVGANYVYTSLKKWSQ 685
RGG +F+AD VG + V + +++
Sbjct: 650 TRGGPMFYADEVGLDKVLADMAVFAR 675
>gi|384222108|ref|YP_005613274.1| hypothetical protein BJ6T_84430 [Bradyrhizobium japonicum USDA 6]
gi|354961007|dbj|BAL13686.1| hypothetical protein BJ6T_84430 [Bradyrhizobium japonicum USDA 6]
Length = 698
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 241/698 (34%), Positives = 380/698 (54%), Gaps = 27/698 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+D V I+T+ +PPVNAL+ + G+ + + A + +K +VLT G F G DI F
Sbjct: 10 HDEVGIVTVNSPPVNALSAAVRGGILECIKAAIADPAIKGVVLTCAGRTFIAGADITEFG 69
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K + DV E IE+ KP+VAA+ G ALGGGLE+A+ CH R+A + +L
Sbjct: 70 KPP---KPPALNDVLAE-----IENSPKPVVAAIHGTALGGGLEVALACHFRVAVKEAKL 121
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
GLPE+ LG++PG TQRLPR VG A++M++ I + E K GLI+ +V E
Sbjct: 122 GLPEVKLGLLPGAGGTQRLPRAVGPELAVKMIVGGDPIGAAEALKNGLIEEIV--EGPAS 179
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 248
+ + A ++P R KL + R + A K + + A D +
Sbjct: 180 GGEAFVRKLLAEKRPLRRLRDDDSKLAAAKADRSIFTNAVAAMTKKSRGLEAPFAAADAV 239
Query: 249 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 308
I G+ KE + F +LV D S+ + FFA+R SK+ V + G K R V +V
Sbjct: 240 GYAIDLPFDEGLKKEREGFLKLVASDQSKAQRYAFFAEREASKIAGVPE-GTKSRPVNRV 298
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
A++G G MG GIA + + V L E E L +G+ ++ N RG + D
Sbjct: 299 AILGAGTMGGGIAMSFANAGVPVTLIETGEEQLKRGMGIMQKNWEATAARGGIPADAPAK 358
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
+ ++ GV+ D D+VIEAV E++ +K+++F +L++ P +LA+NTS ++++ +
Sbjct: 359 RMALINGVVGIENVGDADLVIEAVFETMAVKKEVFGKLDQYVKPGAVLASNTSYLNIDEI 418
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
+ T ++G HFFSPA+VM L EIVR ++T+ ++ +T+ + I KVP VVG C G
Sbjct: 419 AKSTKRPQDVLGMHFFSPANVMKLCEIVRADKTAPDALVTAVTIARKIAKVPAVVGVCDG 478
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR + + L+ G ++D+ + FG+P+GPF + DLAG + + K
Sbjct: 479 FVGNRMLAQRGKQSEKLLFEGALPQQVDAVVTKFGMPMGPFAMGDLAGLDIGWRSRK--- 535
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVLPIIEECRRLSNIM 607
DR +S + D L ++GR G+ GKG Y YE GS+ PDP V +I+E + +
Sbjct: 536 ----DRGIKSEIADALCEAGRFGQKTGKGYYKYEAGSRSALPDPEVEKLIDE----TLLR 587
Query: 608 PGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFW 667
G K V+++EI+E +++P++NE ++LEEGI R SD+D + G +P YRGG +FW
Sbjct: 588 LGRKKRVVSDEEILERMMYPMINEGAKILEEGIAARPSDIDVVWLYGYGWPIYRGGPMFW 647
Query: 668 ADAVGANYVYTSLKKWSQLYGN-FFKPSRFLEERATKG 704
AD VG ++ L +++ + +P+ L++ A +G
Sbjct: 648 ADTVGLKHIADRLSFYAKETNDPSLEPAPLLKKLAAEG 685
>gi|398822432|ref|ZP_10580812.1| 3-hydroxyacyl-CoA dehydrogenase [Bradyrhizobium sp. YR681]
gi|398226887|gb|EJN13129.1| 3-hydroxyacyl-CoA dehydrogenase [Bradyrhizobium sp. YR681]
Length = 698
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 243/699 (34%), Positives = 379/699 (54%), Gaps = 29/699 (4%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+D V I+T+ +PPVNAL+ + G+ D + A + +K IVLT G F G DI F
Sbjct: 10 HDEVGIVTVNSPPVNALSAAVRGGILDCIKAAIADPAIKGIVLTCAGRTFIAGADITEFG 69
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K P E++ + E+ KPIVAA+ G ALGGGLE+A+ CH R+A + +L
Sbjct: 70 K-------PPKPPGLNEVLAEM-ENSPKPIVAAIHGTALGGGLEVALACHYRVAVKEAKL 121
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
GLPE+ LG++PG TQRLPR VG A++M++ I + E K GLI+ +V E
Sbjct: 122 GLPEVKLGLLPGAGGTQRLPRAVGPELAVKMIVGGDPIGAAEALKNGLIEEIV--EGPAS 179
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 248
+ + A ++P R K+ + R + A K + + A D +
Sbjct: 180 GGEAFVRKLIAEKRPLRRLRDDDSKIAAAKADRSIFTNAVAAMTKKSRGLEAPFAAADAV 239
Query: 249 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 308
I G+ KE + F +LV D S+ + FFA+R +K+ V + G K R V +V
Sbjct: 240 GYAIDLPFDEGLKKEREGFLKLVASDQSKAQRYAFFAEREAAKIAGVPE-GTKSRPVNRV 298
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
A++G G MG GIA + + V L E E L +G+ ++ N RG + D
Sbjct: 299 AILGAGTMGGGIAMSFANAGVPVTLIETGEEQLKRGMGIMQKNWEATAARGGIPADAPAK 358
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
+ ++ GV+ D D+VIEAV E++ +K+++F +L++ P +LA+NTS ++++ +
Sbjct: 359 RMALINGVVGIENVGDADLVIEAVFETMAVKKEVFGKLDQYVKPGAVLASNTSYLNIDEI 418
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
+ T ++G HFFSPA+VM L EIVR ++T+ ++ +T+ + I KVP VVG C G
Sbjct: 419 AKSTKRPQDVLGMHFFSPANVMKLCEIVRADKTAPDALVTAVTIARKIAKVPAVVGVCDG 478
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR + + L+ G ++D+ + FG+P+GPF + DLAG + + K
Sbjct: 479 FVGNRMLAQRGKQSEKLLFEGALPQQVDAVVTKFGMPMGPFAMGDLAGLDIGWRSRK--- 535
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVLPIIEEC-RRLSNI 606
DR +S + D L ++GR G+ GKG Y YE GS+ PDP V +I+E RL
Sbjct: 536 ----DRGIKSEIADALCEAGRFGQKTGKGYYKYEAGSRSALPDPEVEKLIDETLLRL--- 588
Query: 607 MPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVF 666
G K VT+ EI+E +++P++NE ++LEEGI R SD+D + G +P YRGG +F
Sbjct: 589 --GRKKRVVTDDEILERMMYPMINEGAKILEEGIAARPSDIDVVWLYGYGWPIYRGGPMF 646
Query: 667 WADAVGANYVYTSLKKWSQLYGN-FFKPSRFLEERATKG 704
WAD VG ++ L +++ + +P+ L++ A +G
Sbjct: 647 WADTVGLKHIADRLAFYAKETNDPSLEPAPLLKKLAAEG 685
>gi|78067690|ref|YP_370459.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia sp. 383]
gi|77968435|gb|ABB09815.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
[Burkholderia sp. 383]
Length = 710
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 239/697 (34%), Positives = 366/697 (52%), Gaps = 19/697 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D V ++T+ +PPVNAL+ + GL D + A + D ++A+++ G G F G DI F
Sbjct: 19 RDKVLVVTIDHPPVNALSADVRRGLADALDVAQADDAIRAVLIVGAGRNFIAGADIREFG 78
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K ++P S+ V IE KP+V A+ G LGGGLE+A+ H R+A P +L
Sbjct: 79 K-------PIVPP-SLPDVCERIESGTKPVVVALHGATLGGGLEVALAAHYRLAVPGAKL 130
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
GLPE+TLG++PG TQR PRL+G A+++ML + ++++E LGL+D V S++ L
Sbjct: 131 GLPEVTLGLLPGAGGTQRAPRLIGAKAALDLMLTGRHVSADEALALGLVDRVAHSDDTLA 190
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 248
+A ++ + P +R L + A+ + AR + K + + +D +
Sbjct: 191 EGLAYAQELVSLGAP-VRRTRDAQGLVDRAAAQAAIDAARAELPKKSRGLFSPAKIVDAV 249
Query: 249 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 308
E + +G+ E +F + + GLVH FFA+R +K P +P V ++
Sbjct: 250 EAALTQSFDAGMAFERSLFLQCIDSPQRAGLVHAFFAEREAAKAPESRRASARP--VERI 307
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
V+GGG MG+GIA + + + V + E + L +G +E GLV +G++T
Sbjct: 308 GVVGGGTMGAGIAVSALDAGLPVTMIERDEASLARGRAHVEKVYDGLVAKGRMTPAAHAA 367
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
L KG Y D+VIEAV E + +K+ +F+EL + C P +LATNTS +D++ +
Sbjct: 368 RLARFKGGTSYDALAQADVVIEAVFEDMAVKKAVFAELARVCKPGAVLATNTSYLDIDEL 427
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
+IG HFFSPA+VM LLEIV R SA V+ + K +KK PV G C G
Sbjct: 428 AASIDRPADVIGLHFFSPANVMKLLEIVVPARVSADVVATAFALAKQLKKTPVRAGVCDG 487
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR Y +A L+ G ++ID A+R FG P+GPFQ++DLAG + AT K
Sbjct: 488 FIGNRILAVYRTAADYLMEDGASPYQIDRAVREFGFPMGPFQVVDLAGGDIGWATRKRRA 547
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIM 607
R+ + D L + G G+ +G Y Y G++ PDP V I+ E R +
Sbjct: 548 ATRDPRARYVEISDRLCERGWFGQKTARGYYLYPDGARVGTPDPEVETIVAEERAKKGVT 607
Query: 608 PGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFW 667
P + T+ EI+ L ++NE V+ E I +R D+D + G FP YRGG + +
Sbjct: 608 PR----TFTDDEIMRRYLAAMINEGANVVHEKIALRPLDVDAVFLYGYGFPRYRGGPMHY 663
Query: 668 ADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
AD VG V ++ +++ F+KPS L + +G
Sbjct: 664 ADTVGLANVLADIRTFAKEDPLFWKPSPLLVDLVARG 700
>gi|94497668|ref|ZP_01304236.1| fatty oxidation complex, alpha subunit [Sphingomonas sp. SKA58]
gi|94422885|gb|EAT07918.1| fatty oxidation complex, alpha subunit [Sphingomonas sp. SKA58]
Length = 689
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 246/699 (35%), Positives = 365/699 (52%), Gaps = 34/699 (4%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVNAL+ + GL+ + E+A S V+AI+L G F G DI F +
Sbjct: 11 DGVALITLDNPPVNALSASLRQGLQAELEQAFSDKAVRAIILLCAGRTFIAGADITEFGQ 70
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+PD+ +++D KP+VAA+ G ALGGG ELA+ CH R+AA ++G
Sbjct: 71 ---PWQPPSLPDLCA-----MLDDAPKPVVAAIHGTALGGGFELALACHYRVAAQSARVG 122
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 189
LPE+ LG++PG TQR+PR+VG A+E++ + I + E LGL+D VV L
Sbjct: 123 LPEVHLGLLPGAGGTQRVPRIVGAETALEIITSGRQIKAAEALSLGLVDTVVEDAALRHN 182
Query: 190 SRLWALDIAAR--RKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDV 247
+ +A I A KP +R R D L + + E+ + A ++
Sbjct: 183 ALAFAHRIVAHGSDKPRVRD--RADALSADRDRPELFTAFAAANARRFKGFVAPAAIIEA 240
Query: 248 IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGV-- 305
++ + G+ KE +F+ L+ S HVFFA+R ++VP DIG +
Sbjct: 241 VKAAVTLPFEQGLAKETDLFERLIASPESAAQRHVFFAEREAARVP---DIGPDTVAIDI 297
Query: 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDK 365
R V VIG G MG GI + I V L E + E L +GI TI N +G++T +
Sbjct: 298 RSVGVIGAGTMGGGITMNFLNAGIPVTLLETSQEALDRGIATIRRNYEATAVKGRMTAAQ 357
Query: 366 ANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL 425
+ ++ LD S D D++IEAV ES+ +K IF+ L++ ILA+NTS +DL
Sbjct: 358 VEQRMDLIAPSLDLSSLTDADLIIEAVYESMDVKTGIFASLDRIARQGTILASNTSFLDL 417
Query: 426 NIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 485
N + TS + ++G HFFSPA+VM LLE+VR TS V+ M + K I KV V+ G
Sbjct: 418 NCIAAATSRPEWVVGLHFFSPANVMRLLEVVRGAETSKAVVATAMRLAKRIGKVAVLSGV 477
Query: 486 CTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSK 545
C GF NR P A ++ + ID + +G +G FQ++DL G V +
Sbjct: 478 CDGFIANRLMAPRGAQAEAMMLEDTPIAEIDRVLVDYGFAMGHFQMMDLVGLDVIGRNAT 537
Query: 546 EFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSN 605
E R+ LV + GR G+ G G Y Y+ + + +I+E
Sbjct: 538 E-------RTVMGDLVAV----GRLGQKRGAGYYDYDDKRRSRFSDVTGKLIKEVAAARG 586
Query: 606 IMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIV 665
I + ++ ++ +L+PVVNE ++LEEGI +RASD+D A+VLG ++P YRGG +
Sbjct: 587 I---ASNRTSGDEALLGRLLYPVVNEGAKILEEGIALRASDIDIAAVLGYNWPVYRGGPL 643
Query: 666 FWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
FWAD VG + + ++ ++G F+P+ L A G
Sbjct: 644 FWADQVGLDRIVADMRALEVVHGETFRPAPLLVRLAEAG 682
>gi|149377817|ref|ZP_01895548.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein [Marinobacter
algicola DG893]
gi|149357875|gb|EDM46366.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein [Marinobacter
algicola DG893]
Length = 698
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 249/702 (35%), Positives = 388/702 (55%), Gaps = 27/702 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
N +A+I L NPPVN L + + G+ + ++A + + VKA+VL G+ FSGG DI+ F
Sbjct: 9 NGNIAVIRLDNPPVNGLGLELRRGIVNGIQQAEADNAVKAVVLIGSDRAFSGGADISEF- 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
G + ++ VVN +E +KP++AA+ G +GGGLELA+GCH RIA P Q+
Sbjct: 68 -----GSPKAFAEPNLNTVVNYVESSRKPVIAAISGACMGGGLELALGCHYRIAKPDAQI 122
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
LPE+ LG++PG TQRLPRL+G A+ M++ + +++ L D ++ E L
Sbjct: 123 ALPEVKLGLLPGAGGTQRLPRLIGAEHAVNMIVSGSVVPAKQFKGSPLFDEIIDGE-LFD 181
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEARE-VLKLARLQAKKTAPNMPQHQACLDV 247
+ +A + + P L + L + E R A N P C++
Sbjct: 182 AAVAYATKVVSEGLP----LKKVRDLKAKHPNPEGFFMFTRNTVGAMAKNYPAPLKCVEA 237
Query: 248 IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVR 306
++ + G+ E + F L+ SR L H FF++R TSK+ +V +D + R ++
Sbjct: 238 VKAAVTMPFDKGMEVEREAFVNLMQTPESRALRHAFFSERLTSKIADVPSDTPV--RDIQ 295
Query: 307 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 366
V VIGGG MG+GI+ + I V L E+ E L +G+ I+ G V +G++++D A
Sbjct: 296 SVGVIGGGTMGTGISINFLNAGIPVTLVEMKQEGLDRGVAAIQKVYEGRVKKGRMSEDDA 355
Query: 367 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 426
+ +L L Y + +VD+VIEAV E + +KQ +F +L++ C ILA+NTST+DL+
Sbjct: 356 KAKMALLTPSLTYDDLSNVDLVIEAVFEEMGVKQSVFEKLDEVCKQGAILASNTSTLDLD 415
Query: 427 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 486
+ T + +IG HFFSPA++M LLE+VR E+T+ V+ M + K IKK VV G C
Sbjct: 416 KIASFTKRPEDVIGLHFFSPANIMKLLEVVRGEKTAKDVLATAMKLAKTIKKTAVVSGVC 475
Query: 487 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKE 546
GF NR Y + A L++ G V +ID AI FG +GP ++ DLAG + A K
Sbjct: 476 DGFIGNRMINQYQREALLMLEEGASVQQIDKAIEKFGFAMGPLRMADLAGGDIGWAIRKR 535
Query: 547 FDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVLPIIEECRRLSN 605
+ PD + L D + + GR G+ G G Y YE G++ DP V +++E R
Sbjct: 536 QYQENPD-MVKMVLADRICEMGRYGQKTGAGFYRYEPGNRNALHDPEVDKVVDEVRAELG 594
Query: 606 IMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIV 665
I KP ++ +EIVE ++ +VNE ++L+EGI RASD+D + G FP +RGG +
Sbjct: 595 I----KPRKISNQEIVERCVYALVNEGAQILDEGIAQRASDIDMVYLTGYGFPVFRGGPM 650
Query: 666 FWADAVGANYVYTSLKKWSQ---LYGNFFKPSRFLEERATKG 704
+A+ VG V +++ +++ F++P+ L +RA +G
Sbjct: 651 HYAEEVGLPNVVRAMQAFTEDRHTQPGFWEPAALLAKRAEEG 692
>gi|386286798|ref|ZP_10063982.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [gamma
proteobacterium BDW918]
gi|385280180|gb|EIF44108.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [gamma
proteobacterium BDW918]
Length = 701
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 248/704 (35%), Positives = 392/704 (55%), Gaps = 35/704 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+ +I++ NPP+NA++ + GL A + D V ++++ G F G DI F K
Sbjct: 21 IGLISINNPPINAISAAVREGLISALTRAKA-DKVSSVLIYCMGKTFIAGADITEFGKPQ 79
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
+P+V ++ IE+ P++AA+ G ALGGGLE+AM H R AA T+LGLP
Sbjct: 80 TG---PTLPEV-----ISAIEEFPVPVIAALHGNALGGGLEIAMAAHYRCAAQNTKLGLP 131
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 191
E+TLG++PG TQRLPRL+G+ KA+ M+ K+I+++E + GLID ++ + L +
Sbjct: 132 EVTLGLVPGSGGTQRLPRLIGVEKALAMISSGKAISADEALQCGLIDQIIAAS-LPESGI 190
Query: 192 LWA---LDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 248
+A +D A+ +P T L + + + K T P + L++I
Sbjct: 191 AYAKELIDNGAKVRP-------TSALIASPVDEHFFENKKNSLKPTGILAPAY--ILELI 241
Query: 249 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 308
E + G E + F E S L H+F A+RA +K+P++ + PR + KV
Sbjct: 242 ELATKTDIHEGQRVERERFLECRSSAGSAALRHIFLAERACTKLPDIAP-SVTPRPINKV 300
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
AVIG G MG GIA V L E E L +G+ IEAN V RG+L+QD+
Sbjct: 301 AVIGAGTMGGGIAMCFASAGFPVTLIETAQENLNRGLDQIEANYNQSVKRGRLSQDQLAK 360
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
A+ +K L Y++ D D+VIEA E++ +K+ +FS+L + C P+CILATNTS +D+N +
Sbjct: 361 AISNIKPSLQYADIADADLVIEATFENMDVKKAVFSKLVEVCKPNCILATNTSYLDVNTI 420
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
+ T +IGAHFFSPA++M LLE+VRT++T+ +V++ +M + K I KV V VG C G
Sbjct: 421 ADVTGRPQDVIGAHFFSPANIMKLLEVVRTQKTAPEVVMSVMVIAKRIGKVAVAVGVCHG 480
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR F Y++ A+LL+ G ++D+ I+++G+ +GP + DLAG ++ + + D
Sbjct: 481 FVGNRMFKAYARQAQLLLLEGCTPAQVDTVIQTWGMAMGPLAVGDLAGIDISYRSRR--D 538
Query: 549 KAFPDRSF-QSPLVDLLLKSGRNGKANGKGLYTYEKGSKP-KPDPSVLPIIEECRRLSNI 606
+ S + L DLL++ GR G+ +G G Y YE ++ K D SV +I+ I
Sbjct: 539 QGICSGSIAEFALPDLLVEMGRLGQKSGSGYYNYEPETRARKNDQSVHDLIQSIANQWCI 598
Query: 607 MPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVF 666
++ EI++ + ++NE +L+EGI R SD+D V G FP +RGG ++
Sbjct: 599 TRR----EISNDEIIDRLSLALINEGAHILDEGIAARPSDIDVVYVNGYGFPRWRGGPMY 654
Query: 667 WADAVGANYVYTSLKKWSQLYGN-FFKPSRFLEERATKGIPLSA 709
AD +G + V L+ + G+ ++P++ L + A LS+
Sbjct: 655 LADKIGLDKVVRKLEILREQTGDTCWEPAKLLHKLAATSQTLSS 698
>gi|424863887|ref|ZP_18287799.1| enoyl-CoA hydratase/3,2-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA
dehydrogenase [SAR86 cluster bacterium SAR86A]
gi|400757208|gb|EJP71420.1| enoyl-CoA hydratase/3,2-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA
dehydrogenase [SAR86 cluster bacterium SAR86A]
Length = 717
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 253/718 (35%), Positives = 396/718 (55%), Gaps = 35/718 (4%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
D VA++T+ NPPVN L+ + GL + +A D +K IV+TGNG F G DI+ F
Sbjct: 11 DNVAVLTVDNPPVNPLSDGVRTGLYECVTKAEEDDSIKGIVVTGNGRAFIAGADISEF-- 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
G+V +S+ V N +E C KP+VAA+ G+ALGGGLE A+ C+ RIAA +G
Sbjct: 69 ---GGNVE---GISLNEVFNKLEHCSKPVVAAINGIALGGGLETALCCNYRIAANTAFVG 122
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 189
LPE+ LG++PG TQRLPRL G S+A++MML I +++ +G++D++ SE +++
Sbjct: 123 LPEVNLGLLPGGGGTQRLPRLAGPSEALKMMLTGGHIPAKKALDMGIVDSI--SENVVED 180
Query: 190 SRLWALDIA--ARRKPWIRSLHRTDKLGSLSEAR---EVLKLARLQAKKTAPNMPQHQAC 244
S +A++ A + + P +R L+ + EAR ++L A+ A K
Sbjct: 181 SIKFAIEKAESSEQHPKVRDLNE-----KMIEARGNDKILLEAQAMAAKGRKGQFAPGQI 235
Query: 245 LDVIEEGIVHGGYS-GVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKP 302
+ +E I + G+ KE ++F E ++ ++H+FF +RA SK+ +V D +K
Sbjct: 236 IKCVEAAINLDDFDEGLKKEGELFLECLLHPQREAMIHIFFGERAASKISDVPKDTPVKE 295
Query: 303 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 362
++K +IG G MG GIA I V + + + E L +G+ IE N +V +G+LT
Sbjct: 296 --IKKAGIIGSGTMGGGIAMCFANAGIPVHIIDQDEENLKRGVSVIEKNYDFMVGKGRLT 353
Query: 363 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 422
++ + ++ L+Y + D D+VIEAV E++ LK +IF L+ P ILA+NTS
Sbjct: 354 SEQKDAVFGLVTSSLEYEDISDCDIVIEAVYENLELKHEIFKTLDSVVKPEAILASNTSG 413
Query: 423 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 482
+D++ + T + ++G HFFSPA++M LLE+VR E TS + + +M VGK +KK VV
Sbjct: 414 LDIDSIAAVTKRPELVVGTHFFSPANIMRLLEVVRGEVTSDETLATVMAVGKKLKKAAVV 473
Query: 483 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAA 542
N GF NR F Y+ A +L+ G +ID A+ SFGL +GPF+++DL G +
Sbjct: 474 SLNAPGFIGNRMLFGYTAQANMLLLEGALPHQIDQALESFGLNMGPFRMMDLVGLDLGWR 533
Query: 543 TSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRR 602
K K P + + D L + R G+ NG G Y Y +GS+ P+ P EE
Sbjct: 534 ARKLSGKESP---LHAKIGDELCEQNRYGQKNGAGYYNYTEGSRA---PNAAPENEELYE 587
Query: 603 LSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRG 662
+ G ++++EIV+ + ++NE +L EG+ RA D+D + G FP +RG
Sbjct: 588 RISQENGFTRREISDEEIVDRCILALINEGANILSEGVAQRAVDIDVVYINGYGFPIWRG 647
Query: 663 GIVFWADAVGANYVYTSLKKWSQLYGN-FFKPSRFLEERATKGIPL-SAPVSSSSTSR 718
G + A+A+G + V L K+ +L GN +KPS L A + + AP + +
Sbjct: 648 GPMHHANAMGLDVVVEKLNKYKELTGNDVYKPSELLVSLAENNLKMGDAPAKADRKEK 705
>gi|402565355|ref|YP_006614700.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia cepacia GG4]
gi|402246552|gb|AFQ47006.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia cepacia GG4]
Length = 711
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 245/699 (35%), Positives = 367/699 (52%), Gaps = 23/699 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D V ++T+ +PPVNAL+ + GL D + A + D ++A+++ G G F G DI F
Sbjct: 20 RDKVLVVTIDHPPVNALSADVRRGLADALDAAQADDAIRAVLIVGAGRNFIAGADIREFG 79
Query: 72 KVHGAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKT 129
K P V L V IE KP+V A+ G LGGGLE+A+ H R+A P T
Sbjct: 80 K----------PPVPPSLPDVCERIESSAKPVVVALHGATLGGGLEVALAAHYRLAVPGT 129
Query: 130 QLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL 186
+LGLPE+TLG++PG TQR PRL+G A+++ML + ++++E GL+D V S++
Sbjct: 130 KLGLPEVTLGLLPGAGGTQRTPRLIGAQAALDLMLTGRHVSADEALAFGLVDRVAHSDDT 189
Query: 187 LKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLD 246
L + ++ + P R+ L + A+ + AR + K + + +D
Sbjct: 190 LAEGLAYTQELVSLGAPARRT-RDAQGLADRAAAQAAIDAARAELPKKSRGLFSPAKIVD 248
Query: 247 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 306
+E + H +G+ E +F + + GLVH FFA+R +KVP +P V
Sbjct: 249 AVEATLTHAFDAGMKLERSLFLQCIDSPQRAGLVHAFFAEREAAKVPEARRASARP--VE 306
Query: 307 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 366
++ V+GGG MG+GIA A + + V + E + L +G +E GLV +G++T
Sbjct: 307 RLGVVGGGTMGAGIAVAALDAGLPVTMIERDEASLARGRAHVEKVYDGLVAKGRMTPAAH 366
Query: 367 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 426
L KG Y D+VIEAV E + +K+ +F+EL +AC P +LATNTS +D++
Sbjct: 367 AARLARFKGSTSYDALAQADVVIEAVFEDMAVKKAVFAELARACKPGAVLATNTSYLDID 426
Query: 427 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 486
+ +IG HFFSPA+VM LLEIV R SA V+ + K +KK PV G C
Sbjct: 427 ELAASIDRPADVIGLHFFSPANVMKLLEIVVPARVSADVVATAFALAKQLKKTPVRAGVC 486
Query: 487 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKE 546
GF NR Y +A L+ G ++ID A+R FG P+GPFQ++DLAG + AT K
Sbjct: 487 DGFIGNRILAVYRTAADYLMEDGASPYQIDRAVREFGFPMGPFQVVDLAGGDIGWATRKR 546
Query: 547 FDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSN 605
R+ + D L + G G+ G+G Y Y G++ PDP V I+ + R
Sbjct: 547 RAATRDPRARYVEISDRLCERGWFGQKTGRGYYLYPDGTRVGTPDPEVEAIVADARAKQG 606
Query: 606 IMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIV 665
I P + T+ EI+ L ++NE V+ E I +R D+D + G FP YRGG +
Sbjct: 607 ITPR----TFTDDEILRRYLAAMINEGANVVHEKIALRPLDVDAVFLYGYGFPRYRGGPM 662
Query: 666 FWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+AD VG V ++ ++Q F+KPS + E +G
Sbjct: 663 HYADTVGLANVLADIRAFAQEDPLFWKPSPLIVELVERG 701
>gi|115352985|ref|YP_774824.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia ambifaria AMMD]
gi|115282973|gb|ABI88490.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
[Burkholderia ambifaria AMMD]
Length = 711
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 239/699 (34%), Positives = 359/699 (51%), Gaps = 23/699 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D V ++T+ +PPVNAL+ + GL D + A + D ++A+++ G G F G DI F
Sbjct: 20 RDKVLVVTIDHPPVNALSADVRRGLSDALDAAQTDDAIRAVLIVGAGRNFIAGADIREFG 79
Query: 72 KVHGAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKT 129
K P V L V IE KP+V A+ G LGGGLE+A+ H R+A P
Sbjct: 80 K----------PPVPPSLPDVCEQIESSAKPVVVALHGATLGGGLEVALAAHYRLAVPGA 129
Query: 130 QLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL 186
+LGLPE+TLG++PG TQR PRL+G A+++ML + +++E LGLID + S++
Sbjct: 130 KLGLPEVTLGLLPGAGGTQRAPRLIGAKAALDLMLTGRHASADEALALGLIDRLAHSDDT 189
Query: 187 LKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLD 246
L +A ++ + P R+ +S + KK+ + +D
Sbjct: 190 LAEGLAYAQELVSLGAPARRTRDARGLADRVSAQAAIDAARADLPKKSR-GLFSPAKIVD 248
Query: 247 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 306
+E + +G+ E +F + + GLVH FFA+R +K P +P V
Sbjct: 249 AVEAALTQSFDAGMKLERSLFLQCIDSPQRAGLVHAFFAEREAAKAPEARRASARP--VE 306
Query: 307 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 366
++ V+GGG MG+GIA A + + V + E + L +G +E GLV +G++T
Sbjct: 307 RIGVVGGGTMGAGIAVAALDAGLPVTMIERDEAALARGRAHVEKVYDGLVAKGRMTPAAH 366
Query: 367 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 426
L KG Y D+VIEAV E + +KQ +F+EL + C P +LATNTS +D++
Sbjct: 367 AARLARFKGSTSYDALAQADVVIEAVFEDMAVKQAVFAELARVCKPGAVLATNTSYLDID 426
Query: 427 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 486
+ +IG HFFSPA+VM LLEIV R SA+V+ + K +KK PV G C
Sbjct: 427 ELAASIDRPADVIGLHFFSPANVMKLLEIVVPARVSAEVVATAFALAKQLKKTPVRAGVC 486
Query: 487 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKE 546
GF NR Y +A L+ G ++ID A+R FG P+GPFQ++DLAG + AT K
Sbjct: 487 DGFIGNRILAVYRTAADYLMEDGASPYQIDRAVREFGFPMGPFQVVDLAGGDIGWATRKR 546
Query: 547 FDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSN 605
R+ + D L + G G+ +G Y Y G++ PDP V I+ + R
Sbjct: 547 RAATRDPRARYVEISDRLCERGWFGQKTARGYYLYPDGARVGTPDPEVEAIVADERAKKG 606
Query: 606 IMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIV 665
I P + ++ EI+ L ++NE V+ E I +R D+D + G FP YRGG +
Sbjct: 607 ITPR----AFSDDEILRRYLAAMINEGANVVHEKIALRPLDVDAVFLHGYGFPRYRGGPM 662
Query: 666 FWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+AD VG V ++ ++ F+KPS + E +G
Sbjct: 663 HYADTVGLANVLADIRAFANEDPLFWKPSPLIVELVERG 701
>gi|163761199|ref|ZP_02168275.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Hoeflea phototrophica DFL-43]
gi|162281538|gb|EDQ31833.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Hoeflea phototrophica DFL-43]
Length = 694
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 257/697 (36%), Positives = 373/697 (53%), Gaps = 34/697 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLK---DKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
VA+IT+ NPPVNAL + + GL D+F E DD + ++ G G F GG DI+ F
Sbjct: 13 VAVITVANPPVNALGLAVRQGLWQAIDRFAE----DDAEIALIVGEGRLFIGGADISEFG 68
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K +PDV IE KP+VAAV G ALGGG E+A+G H R+A Q
Sbjct: 69 KPPVE---PYLPDVCTH-----IERSTKPVVAAVHGPALGGGCEVALGAHYRLAIKGAQF 120
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
G PE+ LG+IPG +QR+PRL G+ A+EMM S+T++E ++GL+D V + +
Sbjct: 121 GFPEVKLGLIPGAGGSQRMPRLTGVGPALEMMPAGGSVTADEALEIGLVDRVAEGDAR-E 179
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 248
+A ++ P +R++ + +A L KK+ + +A +D I
Sbjct: 180 AGLAYARELLESGAP-VRAVGTLPR--PADDAAAFDAARALWQKKSRGEVAPLRA-IDAI 235
Query: 249 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 308
E GV +E ++F EL+ GL+H FF R +K+P + G+ PR + V
Sbjct: 236 EAATKMDLDEGVREERRIFLELMETPQRAGLIHAFFNDRKVAKLPEIE--GIAPRNMAHV 293
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
VIGGG MG+GIATA +L+ + V L E ++ K TI AN+ V RGKL D+ +
Sbjct: 294 GVIGGGTMGAGIATACLLSGLSVTLIERDAAAADKARGTITANLDAAVKRGKLPADRRDA 353
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
L L V DY+E D D+ IEAV E + +K ++F+ L+ P ILATNTS +D+N +
Sbjct: 354 TLSQLSTVTDYAELSDCDLAIEAVFEDMAVKHEVFARLDAVMKPGAILATNTSYLDVNEI 413
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
T +IG HFFSPAHVM LLE+V + T+A V + K + K+ V G C G
Sbjct: 414 AAATRRPSDVIGLHFFSPAHVMKLLEVVVADATAADVTATAFALAKRLGKIAVRAGVCDG 473
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR Y +A ++ G + ID+AI++FGLP+GPF++ DLAG + T K
Sbjct: 474 FIGNRMLATYRGAADRMILDGASPWEIDAAIKAFGLPMGPFEMSDLAGLDIGFMTRKRKA 533
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMP 608
R D + G G+ G+G Y +E G K P+ +V P+IE R
Sbjct: 534 ATRDPRDVVPTWADAMYHEGWLGQKTGQGYYVHE-GRKATPNEAVKPLIEAAR------- 585
Query: 609 GGKPI-SVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFW 667
G +P + T +EI + + +VNE+ +VL E I R D+D + G FP +RGG + W
Sbjct: 586 GDRPQRTFTPEEIQRVYMAAMVNEAAKVLGEEIARRPLDVDVTLLYGYGFPRWRGGPMQW 645
Query: 668 ADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
AD VG + T + +WS+ F++P+ LE+ T+G
Sbjct: 646 ADTVGLPALLTDINEWSKADPYFWQPAPLLEQLVTEG 682
>gi|296533743|ref|ZP_06896290.1| Dodecenoyl-CoA isomerase [Roseomonas cervicalis ATCC 49957]
gi|296265919|gb|EFH11997.1| Dodecenoyl-CoA isomerase [Roseomonas cervicalis ATCC 49957]
Length = 698
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 249/700 (35%), Positives = 369/700 (52%), Gaps = 32/700 (4%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DGVA+ T+ NPPVNAL+ P+ AG+ + A V +V+ G G F G DI F
Sbjct: 10 EDGVAVATIDNPPVNALSAPVRAGVMEAVRRAAEDPAVAGLVVLGAGRAFIAGADITEFG 69
Query: 72 KVHGAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKT 129
K P + L VV +E KP VAA++G+A GGGLELA+GC AR+ PK
Sbjct: 70 K----------PPIPPALGEVVAALEASPKPAVAAIQGVAFGGGLELALGCDARLVGPKA 119
Query: 130 QLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL 186
QLGLPE+ LG++PG TQR PRL+G + A+ M+ + +E+ LGL DA+V + L
Sbjct: 120 QLGLPEVKLGLLPGAGGTQRTPRLIGAAAALPMIASGDPVPAEKAVALGLADALVEGDLL 179
Query: 187 LKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLD 246
AA P + + RTD+L + ARE + A K A PQ A +
Sbjct: 180 AAAKAKVKALAAAPLPPRLNT--RTDRLDAPG-AREEFEQAATALAKRAREEPQVAAIIQ 236
Query: 247 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 306
+ G+ KE F L S+ L HVFFA+R +++P + +KPR V
Sbjct: 237 SVRNAFELPLEQGLAKERDFFVALRDDPRSKALRHVFFAEREAARIPGLPRE-VKPRAVN 295
Query: 307 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 366
+ AV+GGG MG+GIA + I V L E ++ L + +K + V RG L ++
Sbjct: 296 RAAVLGGGTMGTGIAMSFANAGIPVRLIETDAAALERALKRVADTYAVSVKRGSLAEEAR 355
Query: 367 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 426
L +++G + D+V+EAV E + LK++IF++L + P +LA+NTS +D+N
Sbjct: 356 AKRLALIEGAVGLENAAGTDLVVEAVFEELELKKEIFAKLGQITAPGTVLASNTSYLDIN 415
Query: 427 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 486
+G + ++G HFFSPA+VM LLE+VR E T+ + M VG+ + KVPVVVG C
Sbjct: 416 AMGAASGRPGDVLGMHFFSPANVMKLLEVVRAEATAPDALATAMEVGRKLAKVPVVVGVC 475
Query: 487 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKE 546
GF NR ++ L+ G ++D A+ FG +GP + DLAG + K
Sbjct: 476 HGFVGNRMLAQRTRQVEALLQEGATPAQLDKALTDFGFRMGPCAMSDLAGLDIGWRIRKA 535
Query: 547 FDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVLPIIEECRRLSN 605
++P+ D L ++GR G+ GKG Y Y +G++ DP IIE
Sbjct: 536 T-------GAKAPVADALCEAGRLGQKTGKGYYAYPEGARAGVEDPEAQAIIEGISAQLG 588
Query: 606 IMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIV 665
I ++ + EI+E ++FP++NE R+LEEGI R D+D + G ++P++RGG +
Sbjct: 589 IT----RRAIGQDEILERLVFPMINEGARILEEGIAARPGDIDIVWLYGYNWPAWRGGPM 644
Query: 666 FWADAVGANYVYTSLKKWSQLYG-NFFKPSRFLEERATKG 704
ADAVG +V L +++ G + +P+ L A G
Sbjct: 645 HHADAVGLAHVAQRLAHYAEATGDDSLRPAPLLARLAESG 684
>gi|375107014|ref|ZP_09753275.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderiales bacterium
JOSHI_001]
gi|374667745|gb|EHR72530.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderiales bacterium
JOSHI_001]
Length = 696
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 255/700 (36%), Positives = 378/700 (54%), Gaps = 28/700 (4%)
Query: 14 GVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKV 73
GVA+IT+ PP+N L + G+ + A + V A+VL G+ FSGG D+ F
Sbjct: 12 GVAVITMDKPPINGLGFALRHGVAGAMDRALADPGVSAVVLAGSARAFSGGADVTEFGTP 71
Query: 74 HGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGL 133
+ A + L ++++L+E KP+VAAV G LGGG ELAMGCH R+ QLGL
Sbjct: 72 NAAREPRL------PVLIDLLETSPKPVVAAVAGQCLGGGFELAMGCHFRVVQADAQLGL 125
Query: 134 PELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVS 190
PE+ LG++PG TQRLPRL+GL +A+ M ++S S + +K + V ++ +
Sbjct: 126 PEVKLGLLPGAGGTQRLPRLLGLERALNM-IVSGSPAAGATFKGTPVADAVVDAGVVDAA 184
Query: 191 RLWALDIAARRKPWIRSLHRTDKLG-SLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
+A + + P L RT L + A L+ AR A +P C+D +
Sbjct: 185 VAFAEGVVKDKTP----LRRTRDLKVAAPNAEAFLQFARNTVGAMAKGLPAPGKCVDAVA 240
Query: 250 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKV 308
+ + E ++F L+ SR L HVF A+RA SK+ ++ D L R + KV
Sbjct: 241 LSLSKPFDEALRLEREMFLALMGTPESRALRHVFGAERAASKIADLPADAPL--RSIAKV 298
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
VIG G MG GI + I VVL E+ E L KG+ TI N + +GKL ++
Sbjct: 299 GVIGAGTMGGGITMNFLNAGIPVVLLEMKQEALDKGLGTIRRNYENSMKKGKLKPEQVEQ 358
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
+ ++ L Y F DVD+VIEAV E++ +KQ++F L++ C P ILA+NTS ++++ +
Sbjct: 359 RMGLVTPTLSYDAFADVDLVIEAVFENMDVKQQVFETLDRVCKPGAILASNTSYLNIDAI 418
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
T ++G HFFSPA+VM LLE+VR +T+ V+ M + K IKKV VV G C G
Sbjct: 419 AGFTKRPADVLGLHFFSPANVMRLLEVVRGAKTAPDVLATAMALAKKIKKVAVVSGVCDG 478
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR Y +A+ L++ G ++D A++ FGL +GPF++ DLAG + AT K
Sbjct: 479 FIGNRMLARYGAAAQGLINAGALPQQVDGALQKFGLAMGPFRMGDLAGLDIGWATRKR-- 536
Query: 549 KAFPDRSFQSPLV-DLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNI 606
KA P+V D L ++GR G+ G G Y YE G + P PDP +I R +
Sbjct: 537 KAAEAGVEMKPIVADRLCEAGRFGQKTGAGWYRYEAGQRDPIPDPVTEALIVAHRTALGL 596
Query: 607 MPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVF 666
V++ E+VE ++ +VNE R+LEE I RASD+D + G FP RGG +
Sbjct: 597 ----TARKVSDAEVVERCIYALVNEGARILEERIAARASDIDLVYLNGYGFPLTRGGPML 652
Query: 667 WADAVGANYVYTSLKKWSQLYG--NFFKPSRFLEERATKG 704
+AD VG V +L++++ G ++P+ L + A +G
Sbjct: 653 YADTVGLPNVVRTLRRFAAEPGADASWQPAPLLVKLAEEG 692
>gi|407939373|ref|YP_006855014.1| 3-hydroxyacyl-CoA dehydrogenase [Acidovorax sp. KKS102]
gi|407897167|gb|AFU46376.1| 3-hydroxyacyl-CoA dehydrogenase [Acidovorax sp. KKS102]
Length = 699
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 257/703 (36%), Positives = 383/703 (54%), Gaps = 31/703 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA+IT+ NPPVN L + G+ D A + V +IV+TG GG FSGG DI F
Sbjct: 11 VAVITMANPPVNGLGLATRQGIVDGLGRANADAAVTSIVITGAGGAFSGGADIKEF---- 66
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G + + ++ V+ IE+ KP+VAA+ +A+GGGLELA+GCH RIAAP + LP
Sbjct: 67 --GTDKSLQEPNLLSVIAAIENSAKPVVAAMHSVAMGGGLELALGCHYRIAAPGCSIALP 124
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSE-----EGWKLGLIDAVVTSEEL 186
E+ LG+IPG TQRLPR++G+ A+ +++ + + SE G KL ++E L
Sbjct: 125 EVKLGLIPGAGGTQRLPRVIGVEAALNLIVSGEPVKSEMIAGVPGQKL-FDKMAASAESL 183
Query: 187 LKVSRLWALDIA-ARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACL 245
+ +A +A AR P +R+L E + AR K A N P C+
Sbjct: 184 AAEALEFAQSVADARPLPLVRNLPCKH-----PEGDAYFQFARNMVKGMAKNFPAPAKCV 238
Query: 246 DVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGV 305
D +E G+L E ++F L+ SR L H+F A+RA SK+P+V K R +
Sbjct: 239 DAVEAATKKKFAEGMLVEREIFINLMWTPESRALRHLFMAERAASKIPDVASDTPK-RDI 297
Query: 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDK 365
+ V VIG G MG GI+ + I V + E+ E L +G+ TI+ N V +GKL QDK
Sbjct: 298 KLVGVIGAGTMGGGISMNFLNAGIPVKILEMKQEALDRGVATIKKNYEAQVKKGKLKQDK 357
Query: 366 ANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL 425
+ +L L Y + KD D++IEAV E + +K+ +F +L+ P ILA+NTST+D+
Sbjct: 358 YEQRMALLSTTLSYDDLKDCDLIIEAVFEEMGVKEAVFKQLDAVAKPGAILASNTSTLDV 417
Query: 426 NIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 485
+ + T ++G HFFSPA+VM LLE+VR + T+ V+ +M +GK IKK VV G
Sbjct: 418 DKIAAFTKRPQDVVGMHFFSPANVMKLLEVVRGKETAKDVLATVMAIGKKIKKTSVVSGV 477
Query: 486 CTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSK 545
C GF NR YS+ A L+ G ++D AI FG +GPF++ DLAG + A K
Sbjct: 478 CDGFIGNRMIEQYSRQAGFLLDEGCTPQQVDKAIEKFGFAMGPFRMGDLAGNDIGWAIRK 537
Query: 546 EFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVLPIIEECRRLS 604
D + S D L + GR G+ G G Y Y+ G + P V +IE+ R+
Sbjct: 538 RRAVERADMKY-SRTADKLCELGRFGQKTGAGWYDYQAGKRDAIPSDLVNKMIEDHRKEL 596
Query: 605 NIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGI 664
I P ++++EIV+ ++F +VNE +LE+GI ++ D+D + G FP +RGG
Sbjct: 597 GITPR----KISDEEIVQRLVFALVNEGAHILEDGIASKSGDIDMVYLTGYGFPIHRGGP 652
Query: 665 VFWADAVGANYVYTSLKKWSQL---YGNFFKPSRFLEERATKG 704
+ +A VG V ++ ++++ F+KP+ L + A +G
Sbjct: 653 MHYASEVGLFNVVQAMDRFAKNPLDDAAFWKPAPLLAKLAAEG 695
>gi|334342888|ref|YP_004555492.1| 3-hydroxybutyryl-CoA epimerase [Sphingobium chlorophenolicum L-1]
gi|334103563|gb|AEG50986.1| 3-hydroxybutyryl-CoA epimerase [Sphingobium chlorophenolicum L-1]
Length = 685
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 254/708 (35%), Positives = 380/708 (53%), Gaps = 50/708 (7%)
Query: 14 GVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKV 73
G+ +IT+ NPPVNAL I + + FE D VKAIVL G F G DI+ F +
Sbjct: 13 GIGVITVDNPPVNALGIKTRLAIAEGFERFGGDDAVKAIVLICGGRTFFAGADISEFGR- 71
Query: 74 HGAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
P S L V+ +IED KP+VAA+ G ALGGG EL++ CH RIA P +
Sbjct: 72 ---------PPQSPVLHEVMRIIEDSSKPVVAAIHGTALGGGYELSLVCHYRIAVPSAMV 122
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
GLPE+ LG++PG TQRLPR+VG+ A++++ K I +++ LG+IDA+ +L +
Sbjct: 123 GLPEVNLGLLPGAGGTQRLPRIVGVEAALDIITGGKPIKAKQALHLGMIDALAEEGKLRE 182
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKL----GSLSEAREVLKL-AR-LQAKKTAPNMPQH- 241
+ +A I A KP +R R +KL G+ + LK AR + K N+ +
Sbjct: 183 DAIAFARRILAEGKPLLRVRDRNEKLEGAKGNPGLFDDYLKKNARAFRGFKAPTNIVRAI 242
Query: 242 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGL 300
QA +D + +G +E ++F+EL S+ + FFA+R T+K+P++ D+
Sbjct: 243 QAAVDTAPDF-----EAGSRRETELFRELEPSTESQAQRYYFFAERETAKIPDIGKDVPT 297
Query: 301 KPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGK 360
P ++ V VIG G MG GIA + + V L E++ E L +GI I N +G+
Sbjct: 298 LP--IQTVGVIGAGTMGGGIAMNFLNIGVPVTLMEMSQEALDRGIAVIRRNYESAAKKGR 355
Query: 361 LTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 420
LTQD+ + ++ + VD+VIEAV E + +K+ +F++L+ C ILA+NT
Sbjct: 356 LTQDQVEQRMALITPAIGLEALSQVDLVIEAVFEEMGVKKDVFAKLDGICKQGAILASNT 415
Query: 421 STIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVP 480
S +D++ + TS + ++G HFFSPA+VM LLE+VR ++TS +V+ M +GK I KVP
Sbjct: 416 SFLDVDEIAAATSRPEWVVGLHFFSPANVMRLLEVVRGDKTSKEVVATAMALGKKIGKVP 475
Query: 481 VVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVA 540
V+ C GF NR S A ++ G ++D A+ +G +GPFQ+ DL G V
Sbjct: 476 VLSRVCFGFIANRIMAKRSAEASAIILEGPSPQQVDKALYDYGFAMGPFQMNDLVGLDVI 535
Query: 541 AATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEEC 600
S E RS LV L R G+ G Y Y++ K P P +I +
Sbjct: 536 GRGSTE-------RSVAGDLVKL----DRLGQKKNGGYYDYDENRKATPSPVAAQVIADF 584
Query: 601 RRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSY 660
+ + G ++ +IV +L+PVVNE ++LEEGI +RASD+D A++LG ++P Y
Sbjct: 585 AQFKGVENKGPQ---SDADIVARLLYPVVNEGAKLLEEGIALRASDIDVAAILGYNWPVY 641
Query: 661 RGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLS 708
GG +FW D +G + LK +PS L E+A G +
Sbjct: 642 TGGPMFWGDTIGLPKIVEGLKALG------IEPSNLLLEKAAAGTSFT 683
>gi|383769235|ref|YP_005448298.1| fatty oxidation complex alpha subunit [Bradyrhizobium sp. S23321]
gi|381357356|dbj|BAL74186.1| probable fatty oxidation complex alpha subunit [Bradyrhizobium sp.
S23321]
Length = 698
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 244/712 (34%), Positives = 384/712 (53%), Gaps = 29/712 (4%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+D V I+T+ +PPVNAL+ + G+ + + A + +K IVLT G F G DI F
Sbjct: 10 HDEVGIVTVNSPPVNALSAAVRGGILECIKAAIADPAIKGIVLTCAGRTFIAGADITEFG 69
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K P E++ + E+ KPIVAA+ G ALGGGLE+A+ CH R+A + +L
Sbjct: 70 K-------PPKPPGLNEVLAEM-ENSPKPIVAAIHGTALGGGLEVALACHFRVAVKEAKL 121
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
GLPE+ LG++PG TQRLPR VG A++M++ I + E K GLI+ +V E
Sbjct: 122 GLPEVKLGLLPGAGGTQRLPRAVGPELAVKMIVGGDPIGAAEALKNGLIEEIV--EGPAS 179
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 248
+ + A ++P R KL + R + A K + + A D +
Sbjct: 180 GGEAFVRKLLAEKRPLRRLRDDDSKLAAAKADRSIFTNAVASMTKKSRGLEAPFAAADAV 239
Query: 249 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 308
I G+ KE + F +LV D S+ + FFA+R +K+ V + G K R V +V
Sbjct: 240 GYAIDLPFDEGLKKEREGFLKLVASDQSKAQRYAFFAEREAAKIAGVPE-GTKSRPVNRV 298
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
A++G G MG GIA + I V L E E L +G+ ++ N RG + D
Sbjct: 299 AILGAGTMGGGIAMSFANAGIPVTLIETGEEQLKRGLGIMQKNWEATAARGGIPADAPAK 358
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
+ ++ GV+ D D+VIEAV E++ +K+++F +L++ P +LA+NTS ++++ +
Sbjct: 359 RMALITGVVGIENVGDADLVIEAVFETMAVKKEVFGKLDQYVKPGAVLASNTSYLNIDEI 418
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
+ T ++G HFFSPA+VM L EIVR ++T+ ++ +T+ + I KVP VVG C G
Sbjct: 419 AKSTKRPQDVLGMHFFSPANVMKLCEIVRADKTAPDALVTAVTIARKIAKVPAVVGVCDG 478
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR + + L+ G ++D+ + FG+P+GPF + DLAG + + K
Sbjct: 479 FVGNRMLAQRGKQSEKLLFEGALPQQVDAVVTKFGMPMGPFAMGDLAGLDIGWRSRK--- 535
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVLPIIEEC-RRLSNI 606
DR +S + D L ++GR G+ GKG Y YE GS+ PDP V +I+E RL
Sbjct: 536 ----DRGIKSEIADALCEAGRFGQKTGKGYYKYEPGSRSALPDPEVEKLIDETLLRL--- 588
Query: 607 MPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVF 666
G K V++ EI+E +++P++NE ++LEEGI R SD+D + G +P YRGG +F
Sbjct: 589 --GRKKRVVSDDEILERMMYPMINEGAKILEEGIAARPSDIDVVWLYGYGWPIYRGGPMF 646
Query: 667 WADAVGANYVYTSLKKWSQLYGN-FFKPSRFLEERATKGIPLSAPVSSSSTS 717
WAD VG ++ L +++ + +P+ L++ A +G ++ + S +
Sbjct: 647 WADTVGLKHIADRLAFYAKETNDPSLEPAPLLKKLAAEGKTFASLAAGSKAA 698
>gi|407798586|ref|ZP_11145493.1| peroxisomal bifunctional enzyme [Oceaniovalibus guishaninsula
JLT2003]
gi|407059547|gb|EKE45476.1| peroxisomal bifunctional enzyme [Oceaniovalibus guishaninsula
JLT2003]
Length = 704
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 238/701 (33%), Positives = 368/701 (52%), Gaps = 35/701 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A+I + NPPVNAL+ + GL + +A V+ G F G DI+ F K
Sbjct: 15 IAVIEVDNPPVNALSAAVRKGLAEAMTRLAGDAGARAAVICCKGRTFIAGADISEFGK-- 72
Query: 75 GAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
P V L ++ IE KP++AA+ G LGGGLE+A+G H RIA P T++G
Sbjct: 73 --------PPVEPYLPDLIGQIEGAAKPVIAALHGTVLGGGLEVALGAHGRIALPGTRMG 124
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL--- 186
LPE+TLG++PG TQRLPR VG+ A++++ + I+++E KLGLID + ++
Sbjct: 125 LPEVTLGLLPGAGGTQRLPRAVGVEAALDLVTSGRQISADEALKLGLIDTLAEGDDPRAA 184
Query: 187 -LKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACL 245
L +R W LD R+ R + + + L R + K+A L
Sbjct: 185 GLAEARRW-LDEG-------RAPRRLSETAAPDADPQTLDRWRARVAKSARGQVAPLRAL 236
Query: 246 DVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGV 305
DV+ +G+ G+ E + F +L+ ++H FFA+R ++ ++ G+KPR V
Sbjct: 237 DVVADGLAMPFADGMAMERQAFMDLMRTPERAAMIHAFFAERRAAQQDDLA--GVKPRKV 294
Query: 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDK 365
++ VIGGG MG GIA + ++ + V L E + K I + G RGK+ QD
Sbjct: 295 DRIGVIGGGTMGQGIAASALMAGLDVTLVERDDAAAEKARGGIGKMLDGAARRGKIAQDA 354
Query: 366 ANNALK-MLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 424
+ + V Y D+VIEAV E++ +KQ +F L+ C P +LATNTS +D
Sbjct: 355 PAALMDGSFRAVTRYDALAQADLVIEAVFENMEVKQDVFRTLDGICRPGAVLATNTSYLD 414
Query: 425 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 484
+N + + T+ +IG HFFSPAHVM LLEIV +RT+ +V + K + K+ V G
Sbjct: 415 VNRIADATARPQDVIGLHFFSPAHVMRLLEIVVADRTAPEVAATAFALAKRMGKIGVRSG 474
Query: 485 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATS 544
C GF NR Y +A +V G + ID A+ +FG P+GP+Q+ DLAG + AT
Sbjct: 475 VCDGFIGNRMLSTYRAAADHMVLDGASPYDIDRAMVAFGFPMGPYQVGDLAGLDIGHATR 534
Query: 545 KEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKP-KPDPSVLPIIEECRRL 603
+ R D L+++GR G+ G+G Y Y+ + +PDP V P+++ R
Sbjct: 535 QRKAATRDPRERVPVFADRLVEAGRLGRKTGRGYYIYDDETPAGRPDPEVEPMLDGIRAD 594
Query: 604 SNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGG 663
I P +++EI + +VNE R+L+EGI RASD+D + G FP ++GG
Sbjct: 595 LGI----APRQFSDEEIQSRYMAAMVNEGARILDEGIAARASDIDVVLLHGYGFPRWKGG 650
Query: 664 IVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+ WADA G + + + ++++ F++ + L + A +G
Sbjct: 651 PMHWADAQGLDRIADDIARYAEHDAYFWQIAPLLADLAARG 691
>gi|91784409|ref|YP_559615.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Burkholderia xenovorans LB400]
gi|91688363|gb|ABE31563.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia xenovorans LB400]
Length = 706
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 240/694 (34%), Positives = 369/694 (53%), Gaps = 19/694 (2%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
V ++T+ + PVNAL+ + GL E A + V+A+++ G G F G DI F
Sbjct: 18 VLLVTIDHAPVNALSADVRRGLLAAVEAADADSAVQAVLIVGAGRNFIAGADIREF---- 73
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G L P ++ V N IE C KP+VAA+ G ALGGGLE+A+ H RIA +LGLP
Sbjct: 74 --GKPPLPP--ALPDVCNRIEACTKPVVAAIHGAALGGGLEVALAAHYRIAVEGAKLGLP 129
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 191
E+ LG++PG TQR PRL+G A++++L + +++E LGLID + +S ++L
Sbjct: 130 EVQLGLLPGAGGTQRTPRLIGAQAALDLILSGRHASAKEALALGLIDRLGSSGDILAEGL 189
Query: 192 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 251
+ ++ A P +R G + + + AR + K + + +D +E
Sbjct: 190 AYVHELLAAHAP-VRRTRDAVAPGDRAASLAAVTAARAETAKKSRGLFSPLKIVDAVEAA 248
Query: 252 IVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVI 311
I G+ E K+F E + GL+H FFA+R K P D KPR + + V+
Sbjct: 249 IEQPFDEGLRLERKLFLECLDSPQRAGLIHAFFAEREVLKAPETRDA--KPRALNAIGVV 306
Query: 312 GGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALK 371
GGG MG+GIA A + + V + E + L +G+ IE GL+ RG+++ +K +
Sbjct: 307 GGGTMGAGIAVAVLDAGLPVTMIERDDASLARGLAHIEKVYDGLIARGRMSAEKKAAVMT 366
Query: 372 MLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEK 431
G Y D D+VIEAV E + +KQ +F+EL++ C +LATNTS +D++ +
Sbjct: 367 RWNGSTSYDALTDADLVIEAVFEDLAVKQAVFAELDRVCKAGAVLATNTSYLDIDAIAAS 426
Query: 432 TSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAV 491
S +IG HFFSPA++M LLE+V +R SA V+ + K ++K PV G C GF
Sbjct: 427 ISRPADVIGLHFFSPANIMKLLEVVVPKRVSADVVATAFELAKKLRKTPVRAGVCDGFIG 486
Query: 492 NRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAF 551
NR Y +A ++ G ++ID+A+R+FG P+GPFQ++DLAG + A K
Sbjct: 487 NRVLAVYRAAADAMMEDGASPYQIDAAVRAFGFPMGPFQVVDLAGGDIGWAARKRRAATR 546
Query: 552 PDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKP-KPDPSVLPIIEECRRLSNIMPGG 610
+ + D L + G G+ G+G Y Y +GS+ PDP V II+ R + I P
Sbjct: 547 NPAARYVQIADRLCERGWFGQKTGRGFYLYPEGSRSGTPDPEVEAIIDAERARAGITPR- 605
Query: 611 KPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADA 670
S T+ EI+ + ++NE V+ E I +R D+D + G FP YRGG + +AD
Sbjct: 606 ---SFTDDEIIRRYMAAMINEGANVVHERIALRPLDVDVTLLYGYGFPRYRGGPMKYADM 662
Query: 671 VGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
VG + ++++++ F+K S L E +G
Sbjct: 663 VGLPKILADIREFAKEDPLFWKASPLLVELVERG 696
>gi|387814500|ref|YP_005429986.1| bifunctional enoyl-CoA hydratase/3,2-trans-enoyl-CoA
isomerase/3-hydroxyacyl-CoA dehydrogenase [Marinobacter
hydrocarbonoclasticus ATCC 49840]
gi|381339516|emb|CCG95563.1| bifunctional enzyme (PBE) (PBFE) [Includes: Enoyl-CoA hydratase ;
3,2-trans-enoyl-CoA isomerase ; 3-hydroxyacyl-CoA
dehydrogenase ] [Marinobacter hydrocarbonoclasticus ATCC
49840]
Length = 699
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 253/712 (35%), Positives = 382/712 (53%), Gaps = 30/712 (4%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
D + +IT+ NPPVNAL+ + +G+ + +A + DD +AI++ G F G DI+ F K
Sbjct: 9 DELGVITISNPPVNALSHGVRSGILEAVNQAQA-DDSRAILILCEGRTFVAGADISEFGK 67
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + S+ V IE KP++AA+ G ALGGG EL + CH R A P +G
Sbjct: 68 P--------IQEPSLPKVNAAIEASNKPVIAAIHGTALGGGFELTLSCHYRCALPSAFVG 119
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS---EEL 186
LPE+TLG++PG TQR+PRL+G+ A+++M + + +E+ +LGLID V+ E
Sbjct: 120 LPEVTLGLLPGAGGTQRVPRLIGIKAALDLMTSGEKVPAEQARELGLIDRVLEGDLREGA 179
Query: 187 LKVSR-LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACL 245
L +R A + RR IR + G ++ L R Q K Q +
Sbjct: 180 LNYARDCLAGGLGVRR---IRDMQIPVDSGD----QQTLDAYRNQLAKRKRGQEAPQRIV 232
Query: 246 DVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGV 305
D +E + G+ E F E D S L H+FFA+R KVP++ D R +
Sbjct: 233 DCVEIALNRPFDEGLAFERSQFVECTQSDQSAALRHLFFAERKALKVPDL-DPEAHARDI 291
Query: 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDK 365
+V +IG G MG GIA A I V+L E+N E L +G+ I N V+RGKL+ +
Sbjct: 292 SRVGIIGAGTMGGGIAMAFANAGIPVMLLELNQEGLDRGLTLISENYGRSVSRGKLSTSE 351
Query: 366 ANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL 425
A + ++ G ++Y + VD+VIEAV ES+ +K+++F L++ C P ILATNTS +D+
Sbjct: 352 AASRKALITGSINYEDLAKVDLVIEAVFESMDVKKQVFQRLDEVCRPGTILATNTSYLDV 411
Query: 426 NIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 485
N + TS ++G HFFSPA++M LLE+VR E+T+ VI M +GK ++KVPV+
Sbjct: 412 NEIASATSRPGDVVGLHFFSPANIMKLLEVVRAEQTADDVIATAMALGKRLRKVPVLSRV 471
Query: 486 CTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSK 545
C GF NR Y++ A+L + G +ID A+ FG+ +GP + DLAG + +
Sbjct: 472 CYGFIGNRMLRQYAKEAQLCMIEGATPEQIDGALTDFGMAMGPLAVGDLAGLDIGYKARQ 531
Query: 546 EFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVLPIIEECRRLS 604
+ D L++SGR G+ G G Y Y+ ++ + DP V +I+ R S
Sbjct: 532 ALTSEQKGDPRTYCIADALVESGRLGQKTGAGYYRYDPDTRARYSDPQVSEVIK--REAS 589
Query: 605 NIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGI 664
G T++EI + + +VNE R+LEEGI R D+D V G FPSYRGG
Sbjct: 590 RY--GVSQRLFTKEEIQDRHILSLVNEGFRILEEGIAQRPGDIDLVYVHGYGFPSYRGGP 647
Query: 665 VFWADAVGANYVYTSLKKWSQLYGN-FFKPSRFLEERATKGIPLSAPVSSSS 715
+F+A G V+ L+ + G ++KP+ FL+ +G L ++S +
Sbjct: 648 MFYASQRGLGSVFDRLEALAASSGELYWKPAPFLKRLVEQGQTLEEWMASRT 699
>gi|359797543|ref|ZP_09300127.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Achromobacter arsenitoxydans SY8]
gi|359364654|gb|EHK66367.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Achromobacter arsenitoxydans SY8]
Length = 695
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 254/705 (36%), Positives = 387/705 (54%), Gaps = 31/705 (4%)
Query: 8 MEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDI 67
ME G VA+++L NPPVN+L+ + A L ++A + D V+A+V+ G+G F G +I
Sbjct: 8 MESGQ--VALLSLRNPPVNSLSAALRAELHAAIQDALADDAVRALVIAGDGQFFCCGAEI 65
Query: 68 NVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP 127
F + +L V+ LIED KP+VAA+ G ALGGGLELA+GCH R+A
Sbjct: 66 REFNTPMSGREPTL------RTVIALIEDASKPVVAAIHGAALGGGLELALGCHYRVAQS 119
Query: 128 KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 184
LGLPE+ LGV+PG TQRLPR+V + +A+ M+ +I +E GL+D V S+
Sbjct: 120 GASLGLPEVKLGVLPGAGGTQRLPRIVDVERALTMICGGDAIDAETAADCGLLDEVYGSD 179
Query: 185 ELLKVSRLWALDIAA----RRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQ 240
L + + +AL ++A R+ + L G AR+ + AR AP
Sbjct: 180 -LRQRAAAYALKVSAVPLDGRRVGRQPLAAPADAGVYERARQ--EAARRYRGCVAP---- 232
Query: 241 HQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGL 300
AC+ +E G+ E + F ELV S+ H+FFA+RA K+P
Sbjct: 233 -LACVACVEHAAGATLQDGLAFERERFLELVNGGQSKAQRHLFFAERAAVKLPPEWRAA- 290
Query: 301 KPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGK 360
+RKV V+G G MG GIA + + VVL E +++ L +G I N +GK
Sbjct: 291 --GAIRKVGVVGAGTMGGGIAMSLANAGLDVVLIERDAQALERGWSAIRKNYAATAAKGK 348
Query: 361 LTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 420
L+ + ++ LD E +D D+VIEA E + +K+++F L++ C P ILA+NT
Sbjct: 349 LSAVQVEERQGRIRASLDMDELRDADLVIEAAFEDMGVKRQVFEALDRICKPGAILASNT 408
Query: 421 STIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVP 480
S +D++ + T +++G HFFSPA+VM LLE+V+ T V+ + + + + K+P
Sbjct: 409 SRLDVDQIAGFTGRPAQVLGTHFFSPANVMRLLEVVKGRETDGNVVAAVFKLARAMGKLP 468
Query: 481 VVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVA 540
V+VG C GF NR PY++ A L+ G ++D A++ FGL +GP ++ D+AG ++
Sbjct: 469 VLVGVCDGFVGNRMVSPYTREAHFLLEEGATPSQVDGALQRFGLAMGPLRMADMAGLDIS 528
Query: 541 AATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEE 599
A K + P S + D L + GR G+ G G Y YE GS+ P D VL +IE
Sbjct: 529 WAFRKRTASSRPADLRYSRVADSLCEQGRFGQKTGSGFYRYEAGSRTPLEDADVLALIER 588
Query: 600 CRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPS 659
C R + + +VT++EIV+ ++ +VNE R+LEEGI RASD+D V G FP+
Sbjct: 589 CAREDGV----ERRAVTDEEIVQRTMYALVNEGARILEEGIARRASDIDVIYVNGYGFPA 644
Query: 660 YRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+RGG +F+AD G V T+++++ +G ++P+ LE +G
Sbjct: 645 HRGGPLFYADQQGLPEVLTTIRRFHAEHGELWRPAPLLERLVAEG 689
>gi|197106678|ref|YP_002132055.1| fatty oxidation complex subunit alpha [Phenylobacterium zucineum
HLK1]
gi|196480098|gb|ACG79626.1| fatty oxidation complex, alpha subunit [Phenylobacterium zucineum
HLK1]
Length = 691
Score = 390 bits (1003), Expect = e-105, Method: Compositional matrix adjust.
Identities = 247/707 (34%), Positives = 374/707 (52%), Gaps = 30/707 (4%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
VT + VAI+TL +PPVNAL+ + GL + F++A D KAIVL G F G
Sbjct: 7 VTTLTRDGDVAIVTLNSPPVNALSANVRDGLYEGFKQAID-SDAKAIVLICEGRTFIAGA 65
Query: 66 DINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA 125
DI F GA + +PDV ++E+ KP+VAA+ G ALGGGLE+A+ H R+A
Sbjct: 66 DITEF---GGAMKGASLPDVQA-----MMENSPKPVVAAIHGTALGGGLEVALCAHYRVA 117
Query: 126 APKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 182
P +LGLPE+ LG++PG TQRLPR+ G+ KA+EM+ + ++E +GL+D +V
Sbjct: 118 VPSARLGLPEVNLGLLPGAGGTQRLPRIAGVEKALEMVTSGRHAPAKEALAMGLVDELVE 177
Query: 183 SEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQ 242
+L + +A + A KP ++ KL E+ R + + +
Sbjct: 178 EGKLKDGAVAFARKLVAENKPLVKVRENNAKLEEAKGKPEIFAEFRKKNARKFRGFLAPE 237
Query: 243 ACLDVIEEGIVHGGYS-GVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 301
+ IE + + G+ E K+F EL+ S + FFA+R K+P+V D
Sbjct: 238 YNIRCIEAAVNSNSFEEGLAVERKLFMELMTGPQSAAQRYYFFAERTAQKIPDVPD-DTP 296
Query: 302 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 361
R V+KV V+G G MG GIA + I V + E+ + L +G+ TI N +RG +
Sbjct: 297 TRPVKKVGVLGAGTMGGGIAMNFLNVGIPVTIVELKQDALDRGLATIRKNYE--RSRGAV 354
Query: 362 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 421
+ + + +L G L +F D D++IEAV E + +K+ +F++L+ P ILATNTS
Sbjct: 355 PE-QTEQRMSLLTGSLSMDDFADCDLIIEAVFERMDIKKDVFAKLDGIAKPGAILATNTS 413
Query: 422 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 481
++++ + T +IG HFFSPA+VM LLE++R + T+ VI M + K I KV V
Sbjct: 414 YLNIDEIASATKRPQDVIGLHFFSPANVMKLLEVIRADHTAKDVIATSMKLAKQIGKVAV 473
Query: 482 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAA 541
+ G C GF NR + A LV G + ID + FG P+GPF + DLAG +
Sbjct: 474 LAGVCPGFIGNRMLSQRQREANKLVLEGAMPWDIDRVLYDFGFPMGPFAMSDLAGLDIGW 533
Query: 542 ATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECR 601
KE K L D+L + R G+ G G Y Y++ KP P II++ R
Sbjct: 534 V--KENSKG-------ETLRDVLCEMDRRGQKTGAGFYDYDENRTAKPSPVTEKIIQDFR 584
Query: 602 RLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYR 661
I +++++EI+E ++P++NE ++LEEG +R SD+D V G +P YR
Sbjct: 585 AKKGI----NARTISDEEILERCIYPMINEGAKILEEGKAIRPSDIDVVWVNGYGWPVYR 640
Query: 662 GGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLS 708
GG + + D VG + V +K++ G+ FKP+ LE+ +G S
Sbjct: 641 GGPMHYGDFVGPDKVLAKMKEFQGAMGDDFKPAALLEKLVAEGKKFS 687
>gi|295677036|ref|YP_003605560.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Burkholderia
sp. CCGE1002]
gi|295436879|gb|ADG16049.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Burkholderia
sp. CCGE1002]
Length = 706
Score = 390 bits (1003), Expect = e-105, Method: Compositional matrix adjust.
Identities = 243/696 (34%), Positives = 370/696 (53%), Gaps = 23/696 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
V ++T+ + PVNAL + GL E A + V+A+++ G G F G DI F K
Sbjct: 18 VLLVTIDHAPVNALCADVRRGLLGAIEAADADRAVEAVLIIGAGRNFIAGADIREFGK-- 75
Query: 75 GAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
P V L V N IE C KP++AA+ G ALGGGLE+A+ H RIA +LG
Sbjct: 76 --------PPVPPSLPDVCNRIEACAKPVIAALHGAALGGGLEVALAAHYRIAVDGAKLG 127
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 189
LPE+ LG++PG TQR PRL+G A++++L + +++E LGLID + S ++L
Sbjct: 128 LPEVQLGLLPGAGGTQRTPRLIGAPAALDLILSGRHASAKEALALGLIDRLGASGDILAE 187
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
+A ++ A P +R L + + + AR + K A + +D +E
Sbjct: 188 GLAYAHELLAAHAP-VRRTRDAAALNDRAASLAAVAKARDETAKKARGLFSPLKIVDAVE 246
Query: 250 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 309
I G+ E K+F + + GLVH FFA+R K P D KPR + +
Sbjct: 247 AAIEQPFDEGLKFERKLFLQCLDSPQRAGLVHAFFAEREVLKAPETRDA--KPRQLEAIG 304
Query: 310 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 369
VIGGG MG+GIA A + + V + E + L +G I+ GL+ +G+LT DK
Sbjct: 305 VIGGGTMGAGIAIAVLDAGLPVTMIERDEASLARGRAHIDKVYDGLIAKGRLTADKKAAT 364
Query: 370 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 429
+ G Y D+VIEAV E + +K+ +F+EL++ C P +LATNTS +D+ +
Sbjct: 365 MARWSGSTSYDALAHADLVIEAVFEDLDVKKAVFAELDRVCKPGAVLATNTSYLDIEAIA 424
Query: 430 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 489
S +IG HFFSPA++M LLE+V ++ SA V+ + K ++K PV G C GF
Sbjct: 425 ASISRPADVIGLHFFSPANIMKLLEVVVPKQVSADVVATAFELAKKLRKTPVRAGVCDGF 484
Query: 490 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDK 549
NR Y +A L+ G ++ID+A+R+FGLP+GPFQ++DLAG + A K
Sbjct: 485 IGNRLLAVYRAAADALMEDGASPYQIDAAVRAFGLPMGPFQVVDLAGGDIGWAARKRRAA 544
Query: 550 AFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIMP 608
+ + D L + G G+ G+G Y Y +GS+ DP V II+ R+ + I P
Sbjct: 545 TRDPNARYVQIADRLCERGWFGQKTGRGFYLYPEGSRGGMTDPEVEAIIDAERKRAGITP 604
Query: 609 GGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWA 668
S T+++I+ + ++NE V+ EGI +R D+D + G FP YRGG + +A
Sbjct: 605 R----SFTDEQIMRRYMAAMINEGANVVHEGIALRPLDVDVTLLYGYGFPRYRGGPMKYA 660
Query: 669 DAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
D+VG + ++++++ F++PS L E +G
Sbjct: 661 DSVGLATILADIREFAKEDPLFWRPSPLLVELVERG 696
>gi|319764427|ref|YP_004128364.1| 3-hydroxyacyl-CoA dehydrogenase [Alicycliphilus denitrificans BC]
gi|317118988|gb|ADV01477.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Alicycliphilus
denitrificans BC]
Length = 705
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 241/698 (34%), Positives = 382/698 (54%), Gaps = 23/698 (3%)
Query: 13 DG-VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DG V ++T+ NPPVNAL + AGL++ E+ +A+++ G G F G DI F
Sbjct: 15 DGEVLVVTIDNPPVNALRQAVRAGLQEAVEQLEQDAASRAMLIVGQGKAFIAGADIREFG 74
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K A +P+V +N +E K +VAA+ G ALGGGLE+AM H R+A P +L
Sbjct: 75 KPPMA---PFLPEV-----LNRMEAGGKLVVAAIHGPALGGGLEVAMATHYRLALPGAKL 126
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
GLPE+ LG++PG TQR PRL+G A E+ML K ++++ GL+D +V ++ +
Sbjct: 127 GLPEVNLGLLPGAGGTQRSPRLMGALPAAELMLSGKHLSAKAALAAGLVDKLVEGDDPVA 186
Query: 189 VSRLWALDI-AARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDV 247
+ ++ A+ +P R + + + +LA+ AKKT + ++
Sbjct: 187 AGLAYVRELLASGTQP--RRTCDLEVADKAAALAALDQLAQDTAKKTR-GLFSPAKIIEC 243
Query: 248 IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRK 307
++ + GV +E ++F E + GLVH FFA+R T+K+P PR K
Sbjct: 244 VKAAVQMPFAEGVKRERELFLECLNSPQRAGLVHAFFAERETAKIPEAK--AAAPRHFAK 301
Query: 308 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 367
+A+IGGG MG+GI A + + VV+ E ++E + +G K +E GL+ +G++T +
Sbjct: 302 LAIIGGGTMGAGITVAALDAGLSVVMIERDAESIARGRKNVEKVYDGLIAKGRMTAEAKA 361
Query: 368 NALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 427
+ + Y + KDVD+VIEAV E + +K+ +F EL++ C +LATNTS +D++
Sbjct: 362 ATMARYQPSTSYDDIKDVDLVIEAVFEDIEVKKAVFKELDRVCKSGAVLATNTSYLDIDA 421
Query: 428 VGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 487
+ TS +IG HFFSPA++M LLEIV + + V++ + K +KKVPV G C
Sbjct: 422 IAAVTSRPQDVIGLHFFSPANIMKLLEIVVPAKVAPDVVVTAFELAKRMKKVPVRAGVCD 481
Query: 488 GFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEF 547
GF NR Y ++A ++ G + ID+A+R FG P+GPFQ+ DLAG + AT K
Sbjct: 482 GFIGNRILSVYREAANYMLEDGASPYEIDAAVREFGYPMGPFQVSDLAGGDIGWATRKRK 541
Query: 548 DKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKP-KPDPSVLPIIEECRRLSNI 606
R+ + D + + G G+ G+G Y Y +G++ + DP VL I++ R I
Sbjct: 542 AATRDPRARYVEIADRIAERGWYGQKTGRGWYLYPEGARTGQQDPEVLAIVDAERTKKGI 601
Query: 607 MPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVF 666
P + T +EI+ + +VNE +VLEEGI +R D+D + G FP +RGG +
Sbjct: 602 TPR----AFTHEEIMRRYMAAMVNEGAKVLEEGIALRPLDIDVTFLFGYGFPRWRGGPMQ 657
Query: 667 WADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
WAD G V ++ +++ F++P+ L++ +G
Sbjct: 658 WADMQGLPKVLADIEAFAKEDALFWQPAPLLKKLVAEG 695
>gi|158424497|ref|YP_001525789.1| enoyl-CoA hydratase [Azorhizobium caulinodans ORS 571]
gi|158331386|dbj|BAF88871.1| enoyl-CoA hydratase [Azorhizobium caulinodans ORS 571]
Length = 691
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 264/706 (37%), Positives = 377/706 (53%), Gaps = 33/706 (4%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
V E+ GVA +T+ NPPVNAL + AGL A + DV+AIV+ G F G
Sbjct: 4 VRTEISAAGVATLTIANPPVNALGAAVRAGLLSGLTAALANADVRAIVIAAEGKVFVAGA 63
Query: 66 DINVFQKVHGAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
DI+ F K P V L V++ +E KP+VAA+ GLALGGGLELA+ CHAR
Sbjct: 64 DISEFGK----------PPVPPSLPDVLSAVEGSAKPVVAAINGLALGGGLELALACHAR 113
Query: 124 IAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAV 180
+AAP +LGLPE+ LG+IPG TQRLPRLVG + A MM + +++E+ +GL+D +
Sbjct: 114 VAAPAARLGLPEIKLGIIPGAGGTQRLPRLVGAAPAFAMMAGGEPVSAEKARAMGLVDDI 173
Query: 181 VTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQ 240
+ L+ + AL +A W RS K + E R + A A + +P MP
Sbjct: 174 ADGD-LVATAATQALRLA-EAGTWPRSGAAESKFSA--EDRAAFETAASDAIRKSPRMPN 229
Query: 241 HQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGL 300
A + G+ G G+ E F ELV TS+ L H+FFA+R ++VP + +
Sbjct: 230 VAALAHAVRVGLEKGLAEGLAAERAAFLELVKDPTSKALRHLFFAEREAARVPGIGK-EV 288
Query: 301 KPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGK 360
K R V AVIG G MG GIA I V L EV E L G+ I +N V RG
Sbjct: 289 KARPVASAAVIGAGTMGGGIAMCFAQAGIPVTLIEVKEEALSAGLARIRSNYETSVKRGS 348
Query: 361 LTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 420
LT +K L + G + + D+V+EA E + +K +IF L++ P ILATNT
Sbjct: 349 LTSEKMERHLGFITGRVGLEAAAEADIVVEAAFEDMGVKAEIFGALDRLAKPGAILATNT 408
Query: 421 STIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVP 480
S +D+N + E T ++G HFFSPA+VM LLEIVR +T+ V++ + + + I K+P
Sbjct: 409 SYLDVNAIAETTKRPQDVVGLHFFSPANVMRLLEIVRGAKTAPDVLVTSLDLARKIGKLP 468
Query: 481 VVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVA 540
VVVG C GF NR +Q+A L+ G +D A+ FG +GPF + DLAG +
Sbjct: 469 VVVGVCYGFVGNRMLAKRTQAAERLLLAGAMPHEVDDAVTDFGFRMGPFAMSDLAGLDIG 528
Query: 541 AATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGS-KPKPDPSVLPIIEE 599
K ++P+ D L + G G+ G+G Y Y +G+ K + DP +I
Sbjct: 529 WRARKA-------TGAKAPVADALAEQGFFGQKTGRGFYRYPEGARKGERDPDTEALIT- 580
Query: 600 CRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPS 659
RLS+ G S + +EI+ +++P+VNE ++LEEGI R+SD+D V G ++P+
Sbjct: 581 --RLSDER-GITRRSFSREEIIARLMYPMVNEGAKILEEGIASRSSDVDVVWVNGYNWPN 637
Query: 660 YRGGIVFWADAVGANYVYTSLKKWSQLYG-NFFKPSRFLEERATKG 704
+ GG + WA+ VG + +L + G + KP+ L A G
Sbjct: 638 FTGGPMHWAEGVGLARIVEALDALAAETGDDSLKPAALLRRLAQGG 683
>gi|239813853|ref|YP_002942763.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Variovorax paradoxus
S110]
gi|239800430|gb|ACS17497.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Variovorax paradoxus
S110]
Length = 711
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 235/697 (33%), Positives = 375/697 (53%), Gaps = 25/697 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
V ++T+ NPPVNAL + + GL E A + A+++ G G F G DI F K
Sbjct: 23 VFVVTIDNPPVNALGVDVRRGLVAAIEAAEADSAAAAVLIVGAGRNFIAGADIREFGKTP 82
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
+P+V + IE+C KP+VAA+ G ALGGGLE+A+ H R+AAP +LGLP
Sbjct: 83 ---QPPSLPEVCLA-----IENCGKPVVAAIHGAALGGGLEVALSAHYRLAAPSAKLGLP 134
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 191
E+ LG++PG TQR PRL+G+ A+E++L + ++E LGL+D + +
Sbjct: 135 EVQLGLLPGSGGTQRAPRLIGVKPALELVLSGRHAGAKEALSLGLVDRLGNEADARAEGL 194
Query: 192 LWALDIAARRKPWIRSLHRTDKLGSLSE---AREVLKLARLQAKKTAPNMPQHQACLDVI 248
+A ++ A + P + RT + G L++ +R L+ AR + + + ++ +
Sbjct: 195 AYAQELVAAKAP----VRRTREAGGLADKEASRAALEAARADTARKSRGLFSPMKIIEAV 250
Query: 249 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 308
E + G+ E K+F + + GL+H FFA+R K P PR +
Sbjct: 251 EAALTLPFDEGMALERKLFLQCIDSPQRAGLIHAFFAEREVLKAPETRSAA--PRALASA 308
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
++GGG MG+GIA A + + V + E + L +G + +E GL+ +G++T +
Sbjct: 309 GIVGGGTMGAGIAVAMLDAGLPVTMIERDEPSLARGRQHVEKVYDGLIKKGRMTPEAKTA 368
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
+ G Y VD+V+EAV E + +K+ +F+EL++ C +LATNTS +D++ +
Sbjct: 369 VMARFSGSTSYDALAQVDIVVEAVFEDMGVKKAVFAELDRVCKRGAVLATNTSYLDIDEI 428
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
E S ++G HFFSPA++M LLEIV + SA V+ + K +KKVPV G C G
Sbjct: 429 AESISRPQDVVGLHFFSPANIMKLLEIVVPAKVSADVVATGFELAKKLKKVPVRAGVCDG 488
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR Y Q+A ++ G ++ID A+R+FG P+GPFQ+ DLAG + AT K
Sbjct: 489 FIGNRILAVYRQAADHMMEDGASPYQIDEAVRNFGYPMGPFQVSDLAGGDIGWATRKRKA 548
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKP-KPDPSVLPIIEECRRLSNIM 607
++ + D + + G G+ +G Y Y +G++ +PDP VL II+ R + I
Sbjct: 549 ATRDPQARYVQIADRICERGWFGQKTQRGYYLYPEGARTGQPDPEVLAIIDAERERAGIT 608
Query: 608 PGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFW 667
P + TE+EI+ + ++NE V+ + I +R D+D + G FP +RGG + +
Sbjct: 609 ----PRTFTEEEIMRRYMAAMINEGANVVLQRIALRPLDVDVTFLYGYGFPRHRGGPMKY 664
Query: 668 ADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
AD VG V ++++++ F+KPS L E A +G
Sbjct: 665 ADTVGLPKVLADIREFAKEDPIFWKPSPLLVELAERG 701
>gi|56695674|ref|YP_166025.1| enoyl-CoA hydratase [Ruegeria pomeroyi DSS-3]
gi|56677411|gb|AAV94077.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Ruegeria pomeroyi DSS-3]
Length = 698
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 246/700 (35%), Positives = 370/700 (52%), Gaps = 35/700 (5%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+ I+ NPPVNAL + GL + A + + + +++ G G F G DI F K
Sbjct: 13 IVILAADNPPVNALGHAVRQGLAVGLDRAEA-EGARGVLIYGTGRTFFAGADIREFGK-- 69
Query: 75 GAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
P L + N IE +V+A+ G ALGGGLE+A+ H RIA P+ ++G
Sbjct: 70 --------PPKEPHLPELCNRIEASPLLVVSALHGTALGGGLEVALATHYRIAVPQAKVG 121
Query: 133 LPELTLGVIP---GTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE-ELLK 188
LPE+ LG++P GTQRLPR+ G+ A++M+ + + ++E +LG+ID V E +
Sbjct: 122 LPEVHLGILPGAGGTQRLPRVAGVEAALDMITTGRHVRADEALRLGVIDRVAEGEPREIG 181
Query: 189 VSRLWA-LDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDV 247
+S L LD A R+P + + + + VL+ R Q AC
Sbjct: 182 LSYLRELLDEGAPRRP-VGEMPAPAPVDFDAIYAAVLRKGRGQLSPATAVRAVQAACE-- 238
Query: 248 IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRK 307
+G+ +E ++F EL+ D GL+H FFA RA K+P + G+ PR +
Sbjct: 239 -----AESFAAGLKRERELFMELMNSDQREGLIHAFFADRAVGKLPELE--GVAPRPLAA 291
Query: 308 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 367
+ VIGGG MG+GIATA +L+ + V + E+ E IE N+ G + RGKLT + +
Sbjct: 292 IGVIGGGTMGAGIATAALLSGLSVTMLEMTPEAAEAAKGRIEGNLSGALKRGKLTAQQFD 351
Query: 368 N-ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 426
N K L +DY D D+VIEAV E + +K+++F++L+ C P +LA+NTS +D+N
Sbjct: 352 NLTTKALTLAIDYDALADADLVIEAVFEDMEVKKQVFTKLDAVCKPGAVLASNTSYLDIN 411
Query: 427 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 486
+ TS ++G HFFSPAHVM LLE+V ++T+ V +GK + KV V G C
Sbjct: 412 QIAAVTSRPQDVLGLHFFSPAHVMKLLEVVIADQTAPDVAATGFALGKRLGKVSVRAGVC 471
Query: 487 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSK- 545
GF NR Y A ++ G ++ID A+ FG +GPF + DLAG + A K
Sbjct: 472 DGFIGNRILSVYRTCADHMILDGASPYQIDEALEEFGFAMGPFAVADLAGLDIGWAVRKR 531
Query: 546 EFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVLPIIEECRRLS 604
+ + R+ S D L ++G G+ GKG Y Y G+K + P+P VLP+IE R
Sbjct: 532 KRAEGLDPRARDSAYADKLCEAGHFGQKTGKGYYDYAAGAKARVPNPEVLPLIEAERAQQ 591
Query: 605 NIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGI 664
I P + ++ EIV + +VNE+ +V+ EGI R D+D + G FP YRGG
Sbjct: 592 GIT----PRAFSKDEIVRRYMAAMVNEAAKVVGEGIARRPLDVDVTLLYGYGFPRYRGGP 647
Query: 665 VFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+ WAD G + +K+W+ F++P+ LE+ +G
Sbjct: 648 LKWADMQGLPELLADIKRWAAEDAYFWQPAPLLEQLVAEG 687
>gi|332525955|ref|ZP_08402096.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Rubrivivax
benzoatilyticus JA2]
gi|332109506|gb|EGJ10429.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Rubrivivax
benzoatilyticus JA2]
Length = 702
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 249/712 (34%), Positives = 377/712 (52%), Gaps = 37/712 (5%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA++TL NPPVN L + L E A + V AIV+TG G FSGG DI F
Sbjct: 11 VAVLTLDNPPVNGLGLATRRELSAGLERALADPAVVAIVVTGAGKVFSGGADIKEF---- 66
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G + + ++ ++ +E KP+VAA+ G +GGGLEL++ CH R+AAP TQ+ LP
Sbjct: 67 --GTDRAIAEPNLHSLIRQVELAGKPVVAAMHGTCMGGGLELSLACHYRVAAPATQVALP 124
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSE-----EGWKLGLIDAVVTSEEL 186
E+ LG++PG TQRLPR++ + A+ M++ + + SE G KL A + EL
Sbjct: 125 EVKLGLLPGAGGTQRLPRVLDVETALNMIVSGEPVASELLASLPGQKL---FAQIVEGEL 181
Query: 187 LKVSRLWALDIAARRK-----PWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 241
L + +A P +R L + + AR K A + P
Sbjct: 182 LAGAVAFAAAKGHEHAGGAPLPRVRDLK-----ARHANPDAFFQFARNTVKAMARHFPAP 236
Query: 242 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGL 300
C+D +E + +G+ E ++F L+ S+ L H FFA+RA SK+P+V D L
Sbjct: 237 AKCVDAVEAAVKRDIDAGLAYERELFMALMFTPESQALRHAFFAERAASKIPDVPEDTPL 296
Query: 301 KPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGK 360
R + KV V+G G MG GI+ + + V + E +E L +G+ TI N V +GK
Sbjct: 297 --RRITKVGVVGAGTMGGGISMNFLNAGLPVTILETTAEALERGVATIRRNYEAQVKKGK 354
Query: 361 LTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 420
L +DK + +L L Y++ D+VIEAV E + +KQ++F L++ P ILA+NT
Sbjct: 355 LKEDKYQQRMALLTTTLSYADLAGCDLVIEAVYEDLGVKQQVFGALDEVVKPGAILASNT 414
Query: 421 STIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVP 480
ST+D+N + T ++G HFFSPA+VM LLE+VR E+T+ V+ +M + K I+K
Sbjct: 415 STLDVNRIAGFTKRPADVVGMHFFSPANVMKLLEVVRGEKTAKDVLATVMQLAKTIRKTA 474
Query: 481 VVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVA 540
VV G C GF NR YS+ A L+ G ++D A+ +FG +GPF++ DLAG +
Sbjct: 475 VVSGVCDGFIGNRMIEQYSRQAGFLLEEGCTPQQVDKAVEAFGFAMGPFRMGDLAGNDIG 534
Query: 541 AATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEEC 600
A K P + S DLL + GR G+ G G Y Y G K D P++EE
Sbjct: 535 WAIRKRRYVEQPQMRY-SQTADLLCEMGRYGQKTGAGWYDYAPG---KRDAIPSPVVEEM 590
Query: 601 RRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSY 660
G ++++ EIV +++ +VNE ++LE+GI +ASD+D + G FP +
Sbjct: 591 VAKHRAGLGITARTISDDEIVHRLVYALVNEGAKILEDGIASKASDIDMVYLTGYGFPLW 650
Query: 661 RGGIVFWADAVGANYVYTSLKKWSQL---YGNFFKPSRFLEERATKGIPLSA 709
RGG + +AD+ G V ++K +++ F++P+ L A +G +A
Sbjct: 651 RGGPMCYADSQGLFNVVQTMKAFARNPLDDAGFWEPAPLLARLAAEGRRFTA 702
>gi|452964617|gb|EME69653.1| glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a
[Magnetospirillum sp. SO-1]
Length = 703
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 253/708 (35%), Positives = 375/708 (52%), Gaps = 30/708 (4%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
VT+ V D +A +T+ +PPVNA P+ AGL+ F + R D A V+ G F G
Sbjct: 5 VTLSV-TDRIATVTIDSPPVNAADHPVRAGLQKVFTDLAGRADYDAAVVVCAGRTFMAGA 63
Query: 66 DINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA 125
DI F D + P +L NL+E C KP+VAA+ G ALG G ELAM CH R+A
Sbjct: 64 DIGEF-------DTGIKPPHHQDLF-NLVESCAKPVVAALHGTALGAGTELAMACHYRVA 115
Query: 126 APKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 182
++GLPEL+LG+IPG TQR PRL+GL A++++L K + + + +LGL+D V
Sbjct: 116 DKGARIGLPELSLGIIPGAGGTQRAPRLIGLDAAMDLVLSGKPVPAAKALELGLVDEVAA 175
Query: 183 SEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQ 242
++ +A + P RT L A+ +A QA+ A M
Sbjct: 176 ADVNAAALAYAKKLVAEGKGP-----RRTCDLAVKDAAKAAEIIAARQAQ-VAKTMKNRT 229
Query: 243 ACLDVIEEGIVHGGY---SGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIG 299
+ L ++E G+ EA + ++L +R + H+FFA R K+P +T
Sbjct: 230 SPLKLVEAMAAAASLPFAEGLKLEADISRQLEHAVEARAMRHLFFADREVRKIPGITK-D 288
Query: 300 LKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRG 359
+K R +RKV +IG G MG GIA + V + +V+ E L +G+ I N V+RG
Sbjct: 289 IKARPIRKVGIIGAGTMGGGIAMCFANIGVPVTIIDVSDENLQRGLGIIRKNYERSVSRG 348
Query: 360 KLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATN 419
LT ++ + + +L DY+ KD D+ IEAV E + LK+ IF+ L+ P IL TN
Sbjct: 349 SLTAEQLESRMGLLSVSTDYAALKDADLAIEAVFEKMELKKDIFARLDAVLPAGAILGTN 408
Query: 420 TSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKV 479
TST+D++ + T +IG HFFSPA+VMPLLEIV+ +TS V+L + + K+IKK
Sbjct: 409 TSTLDIDEIAATTKRPADVIGLHFFSPANVMPLLEIVQGAKTSMDVLLTALDMAKLIKKT 468
Query: 480 PVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGV 539
VV C GF NR PY + A +V G ID A+ +G+ +G + D+AG V
Sbjct: 469 GVVSKVCYGFIGNRMMDPYGREAERMVLEGATPADIDGALEGWGMAMGILAVYDMAGIEV 528
Query: 540 AAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVLPIIE 598
T PD LL+ + G+ G+G Y Y+ + + P P V+ ++
Sbjct: 529 GDNTRIANPHMVPDDPSFYRCSALLVANKWLGQKTGRGYYRYDSPDRKRAPCPEVIEMMH 588
Query: 599 -ECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSF 657
E +RL+ +P KP + EI+E L+ ++NE ++LEEGI +RASD+D G F
Sbjct: 589 AEGKRLN--VPARKP---GKDEILERCLYSMINEGAKLLEEGIALRASDIDVVYTAGYGF 643
Query: 658 PSYRGGIVFWADAVGANYVYTSLKKWSQ-LYGNFFKPSRFLEERATKG 704
P YRGG +F+AD VG +Y + ++ + L ++ P+ LE+ A G
Sbjct: 644 PRYRGGPMFYADTVGLKVIYDKIVEFGKTLDPRYWTPAPLLEKLAKSG 691
>gi|398812024|ref|ZP_10570805.1| 3-hydroxyacyl-CoA dehydrogenase [Variovorax sp. CF313]
gi|398079241|gb|EJL70108.1| 3-hydroxyacyl-CoA dehydrogenase [Variovorax sp. CF313]
Length = 711
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 237/703 (33%), Positives = 374/703 (53%), Gaps = 20/703 (2%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
VT E D V ++T+ NPPVNAL + + GL + A + +A+++ G G F G
Sbjct: 15 VTFERRGD-VFVVTIDNPPVNALGVDVRRGLVAAIDAAEADSAARAVLIVGAGRNFIAGA 73
Query: 66 DINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA 125
DI F K +P+ ++ IE+C KP+VAA+ G ALGGGLE+A+ H RIA
Sbjct: 74 DIREFGKTP---QPPSLPEACLK-----IENCTKPVVAAIHGAALGGGLEVALSAHYRIA 125
Query: 126 APKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 182
+P +LGLPE+ LG++PG TQR PRL+G A+E+ML + ++E LGL+D +
Sbjct: 126 SPTAKLGLPEVALGLLPGSGGTQRAPRLIGAKPALELMLSGRHADAKEALSLGLVDRLGN 185
Query: 183 SEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQ 242
+ L +A ++ A + P +R L +R L+ AR K + +
Sbjct: 186 DADALAEGLAYAQELVAAKAP-VRRTREAAGLVDTEASRAALEAARADTAKKSRGLFSPM 244
Query: 243 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 302
++ +E + G+ E K+F + + GL+H FFA+R K P KP
Sbjct: 245 KIIEAVEGALTLPFDEGMALERKLFLQCIDSPQRAGLIHAFFAEREVLKAPETK--AAKP 302
Query: 303 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 362
R + ++GGG MG+GIA A + + V + E + L +G + +E GL+ +G++T
Sbjct: 303 RALESAGIVGGGTMGAGIAVAMLDAGLPVTMIERDEPSLARGRQHVEKVYDGLIAKGRMT 362
Query: 363 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 422
+ + G Y +VD+V+EAV E + +K+ +F+EL++ C +LATNTS
Sbjct: 363 PESKAAVMARFNGSTSYDALANVDIVVEAVFEEMGVKKAVFAELDRVCKRGAVLATNTSY 422
Query: 423 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 482
+D++ + + S ++G HFFSPA++M LLEIV + SA V+ + K +KKVPV
Sbjct: 423 LDIDEIADSISRPQDVVGLHFFSPANIMKLLEIVVPAKVSADVVATGFELAKKLKKVPVR 482
Query: 483 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAA 542
G C GF NR Y Q+A ++ G + ID+A+R+FG P+GPFQ+ DLAG + A
Sbjct: 483 AGVCDGFIGNRILAVYRQAADHMMEDGASPYEIDAAVRNFGYPMGPFQVSDLAGGDIGWA 542
Query: 543 TSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVLPIIEECR 601
T K ++ + D + + G G+ +G Y Y +G++ PDP VL II+ R
Sbjct: 543 TRKRKAATRDPQARYVQVADRICERGWFGQKTQRGYYLYPEGARTGVPDPEVLAIIDAER 602
Query: 602 RLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYR 661
+ G P TE+EI+ + ++NE V+ + I +R D+D + G FP +R
Sbjct: 603 ----VRAGITPRQFTEEEIMRRYMAAMINEGANVVLQRIALRPLDVDVTFLYGYGFPRHR 658
Query: 662 GGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
GG + +AD VG V ++++++ F+KPS L E +G
Sbjct: 659 GGPMKYADTVGLPKVLADIREFAKDDPLFWKPSPLLVELVERG 701
>gi|390450411|ref|ZP_10236003.1| enoyl-CoA hydratase [Nitratireductor aquibiodomus RA22]
gi|389662484|gb|EIM74046.1| enoyl-CoA hydratase [Nitratireductor aquibiodomus RA22]
Length = 690
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 259/700 (37%), Positives = 387/700 (55%), Gaps = 33/700 (4%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
++G+A++TL NPPVNAL + A L + E + D V+AIV+ G F G DI+ F
Sbjct: 10 DNGIAVLTLDNPPVNALGHALRAPLFEALGEMNADDAVQAIVIACAGRTFIAGADISEFG 69
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K +PD+ + +E KP VAA+ G ALGGGLELA+GCH RIA +
Sbjct: 70 K---PPKEPSLPDL-----IEKLESIDKPTVAAIHGTALGGGLELALGCHYRIADRSAMI 121
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
GLPE+ LG+IPG T RLPRLVG A++M++ K I +E +LG +D V S+ LL
Sbjct: 122 GLPEVNLGLIPGAGGTVRLPRLVGPEAALKMIVSGKPIGMDEAVRLGAVDRVAESD-LLA 180
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLG-SLSEAREVLKLARLQAKK-TAPNMPQHQACLD 246
+ +A D+AA +KP I R++KL L+ E +K+A +A+ TAP H A +
Sbjct: 181 EAVAFARDMAASKKPHIHIRARSEKLAIDLAAFDEAVKVATKKARGLTAP----HTAA-E 235
Query: 247 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 306
+ I + + +E ++F E + S H+FFA R ++VP + + R +
Sbjct: 236 AVRNAITMEFDAALDRERELFLERRDSEESAAQRHLFFATREATRVPGIPR-ETEARKIA 294
Query: 307 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 366
+ VIG G MG+GIA A I V + E+N + + +G+ I+ G + RG +T ++
Sbjct: 295 RAGVIGAGTMGAGIAMALANGGIPVTILEMNEDAIARGLAHIDKTYAGSLKRGSITAEEK 354
Query: 367 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 426
+ G Y++ D D+VIEAV E + +K+++F+ L+ P ILA+NTS +D+N
Sbjct: 355 EARTGRISGTTHYADLADCDIVIEAVFEEMGVKRQVFTALDGMLKPGAILASNTSYLDVN 414
Query: 427 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 486
+ T ++G HFFSPAHVM LLEIVR E T+ VI + + + I KVPVVVG C
Sbjct: 415 EIAATTKRPQDVVGLHFFSPAHVMKLLEIVRGEETAPDVIKTALALARKIGKVPVVVGVC 474
Query: 487 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKE 546
GF NR + L+ G ++D FG P+GPFQ++DLAG ++
Sbjct: 475 NGFVGNRMLAARREQNEDLLLSGATPEQVDRVFTDFGWPMGPFQMVDLAGLDISW----- 529
Query: 547 FDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSN 605
K + +P+ D L ++G G+ G+G Y YE+GS+ PKPDP V +IE ++ +
Sbjct: 530 --KHRQSQGLTAPIGDTLCEAGHFGQKTGRGFYLYEEGSRTPKPDPFVQELIE--KKAAE 585
Query: 606 IMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIV 665
+ G + ++ EI E L+P++NE ++LEE I RASD+D V G FP +GG +
Sbjct: 586 L--GVERREISADEITERTLYPMINEGAKILEERIAARASDIDVVWVNGYGFPVAKGGPM 643
Query: 666 FWADAVGANYVYTSLKKWSQLYGN-FFKPSRFLEERATKG 704
FWA+ G + L+ W + GN F+P+ L + A G
Sbjct: 644 FWAERFGIKTIVERLEHWHRKTGNRVFEPAPILRQLALTG 683
>gi|399993437|ref|YP_006573677.1| fatty acid oxidation complex subunit alpha [Phaeobacter
gallaeciensis DSM 17395 = CIP 105210]
gi|398657992|gb|AFO91958.1| fatty acid oxidation complex subunit alpha [Phaeobacter
gallaeciensis DSM 17395 = CIP 105210]
Length = 706
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 251/710 (35%), Positives = 367/710 (51%), Gaps = 31/710 (4%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+GVA I L P VNAL + + L E + + VKAIVL F GG DI F
Sbjct: 7 TEGVAFIELNAPSVNALGLKMRQVLSSAIHELDADEQVKAIVLCSALPLFCGGADIVEF- 65
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ D +PD+ V +IE KKPI+AA+ G A+GG LE+A+ C R+A P +
Sbjct: 66 RTGAVWDKPDLPDLCV-----MIETSKKPIIAAIAGPAMGGALEIALACDYRVATPDAVM 120
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
GLPE+ LG++PG TQRLPR+ GL A +M+L + E GL+DA+ +++ +
Sbjct: 121 GLPEIKLGLLPGAGGTQRLPRIAGLEAATQMILSGDPVKGEYALSCGLVDALFENDQDFR 180
Query: 189 VSRL-WALDIAA----RRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQA 243
L +A ++ +R ++ D G L+ R+ Q T+ N+ +
Sbjct: 181 AHVLGFATRVSHEGDPKRSCADMTVRHPDPKGYLTGFRD-------QIAHTSKNLVAPER 233
Query: 244 CLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPR 303
CL IE G+ +E F EL+ SR H+FFA+R +KVP VT +PR
Sbjct: 234 CLVSIEAACEMPLAEGLEQEKAGFAELLDTPQSRAGRHLFFAERECTKVPGVTRAD-RPR 292
Query: 304 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQ 363
+ VAVIG G MG GIA A + V L E L +G++ + + + +G+L+
Sbjct: 293 DIASVAVIGAGTMGRGIAIAFLQAGYPVTLLETTQGALEQGLEKVREHFQRAAQKGRLSA 352
Query: 364 DKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI 423
D+A G L Y+ D++IEA ES+ +K++IF L+ P ILA+NTST+
Sbjct: 353 DRAEAISANATGTLSYAGLAKADLIIEAAFESMNVKRQIFEALDLHAKPGAILASNTSTL 412
Query: 424 DLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVV 483
DL+ + TS + +IG HFFSPA+VM LLE+VR +T+ VI +TV K I+K+PV V
Sbjct: 413 DLDEIATVTSRPEDVIGLHFFSPANVMRLLEVVRGAKTAPDVIATAITVAKKIRKLPVTV 472
Query: 484 GNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAAT 543
G C GF NR PY + L+ G ++D + FG+ +G + DLAG V A
Sbjct: 473 GVCYGFVGNRMLEPYFREGSRLLLEGATPKQVDDVLEGFGMAMGIHAMADLAGVDVGARV 532
Query: 544 SKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRL 603
+E + D L + GR G+ G+G Y YE G DP ++ I E L
Sbjct: 533 RQERRSEIAHDPTYQAVQDRLFELGRLGQKTGRGSYVYE-GRTRVEDPEMVQISSELADL 591
Query: 604 SNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGG 663
+ K + ++EI+E LFP++NE +LEEGI R D D V G FP++RGG
Sbjct: 592 HGV----KRRDIDDQEILERCLFPLINEGFLILEEGIATRPGDCDLIWVNGYGFPNWRGG 647
Query: 664 IVFWADAVGANYVYTSLKKWSQLYGNF----FKPSRFLEERATKGIPLSA 709
+ +AD +G + + + + Q G + F P+ LE+ AT G+ L A
Sbjct: 648 PMHYADEIGLSQIMERMTHYRQSLGAYGEMWFTPAPLLEQLATSGVTLDA 697
>gi|449266986|gb|EMC77964.1| Peroxisomal bifunctional enzyme, partial [Columba livia]
Length = 703
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 261/705 (37%), Positives = 381/705 (54%), Gaps = 44/705 (6%)
Query: 28 LAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSV 87
++P++ L++ + A + VKAI++ G G+FS G DI F G +SL P VS
Sbjct: 1 FSLPVLQALENGLKRADADPSVKAIMICGENGKFSAGADIRGFSSPKTQG-ISLGPFVS- 58
Query: 88 ELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---T 144
LIE C+KP+VAA+EG+ALGGGLE+A+GCH R+A K ++GLPE+T+G++PG T
Sbjct: 59 -----LIERCEKPVVAAIEGVALGGGLEVALGCHYRVAHVKARMGLPEVTIGLLPGGEGT 113
Query: 145 QRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPW 204
QRLPRL+G+ A++++ + I + E KLGL+D VV + + RL I +P
Sbjct: 114 QRLPRLIGVPAALDIITTGRHIPATEALKLGLVDEVVKEDTIEAAIRLANKVIGQPLEPR 173
Query: 205 IRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEA 264
SL KL ++ L A ++ KK A + C + GV KE
Sbjct: 174 RLSLRPVPKLPNMEA---FLSEALVKLKKQARGYLAPELCFQAVRAATELPFADGVRKER 230
Query: 265 KVFKELVMLDTSRGLVHVFFAQRATSK--VPN-VTDIGLKPRGVRKVAVIGGGLMGSGIA 321
++F L+ ++ L + FFA+RA K P+ + P+ + K AVIG G MG GI
Sbjct: 231 ELFNVLLTSGQAQALQYAFFAERAVQKWTTPHGASWQNASPQPIHKAAVIGLGTMGRGIV 290
Query: 322 TAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTR---GKLTQDKANNALKMLKGVLD 378
T+ + NI VV E N EYL G K + + + G T D N A L+ +D
Sbjct: 291 TSLVKANIPVVALEQNLEYLNTGRKAVMLLLEREAMKMEHGAQTLDFHNPA--RLQFTVD 348
Query: 379 YSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRI 438
+ +DVD+VIEAV E++PLK++IF +L C P L TNTS ++++ + TS ++
Sbjct: 349 FDALRDVDLVIEAVFENMPLKKEIFQKLSGICKPAAFLCTNTSALNIDEIASATSRPQQV 408
Query: 439 IGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPY 498
IG HFFSPAH+M LLEI+ TS I + + K++KKV VVVGNC GFA NR FPY
Sbjct: 409 IGTHFFSPAHIMRLLEIIYGHHTSPTTIATAVQLAKVLKKVGVVVGNCFGFAGNRMMFPY 468
Query: 499 SQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSF-- 556
+ A L+ G +D + FG IGPF++ DLAG V + K D+ S
Sbjct: 469 VEQAVFLLEEGSRPEAVDQVLEDFGFKIGPFRMSDLAGLDVGWRSRK--DRGLTGDSVPP 526
Query: 557 -----------QSPLVDLLLKSGRNGKANGKGLYTYEK--GSKPKPDPSVLPIIEECRRL 603
SPL DLL ++GR G+ GKG Y YEK G KPDP + ++ + R
Sbjct: 527 GTPACQRHGHRYSPLPDLLCENGRFGQKTGKGWYQYEKAGGRTAKPDPWLHDVLTQYRDT 586
Query: 604 SNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGG 663
+I K + ++EI+E LF ++NE +L E I LD + G +P +RGG
Sbjct: 587 HHI----KTRFIDQEEILERCLFSLINEGFDILAERIASDPEHLDVIYIHGYGWPKHRGG 642
Query: 664 IVFWADAVGANYVYTSLKKWSQLYGNF--FKPSRFLEERATKGIP 706
+F+A VG ++ L+K+S+ + + +PS FL++ G P
Sbjct: 643 PMFYASTVGLPHILAKLQKYSEAHPDVPALRPSTFLKKLVAAGNP 687
>gi|330826648|ref|YP_004389951.1| 3-hydroxybutyryl-CoA epimerase [Alicycliphilus denitrificans K601]
gi|329312020|gb|AEB86435.1| 3-hydroxybutyryl-CoA epimerase [Alicycliphilus denitrificans K601]
Length = 705
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 241/698 (34%), Positives = 382/698 (54%), Gaps = 23/698 (3%)
Query: 13 DG-VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DG V ++T+ NPPVNAL + AGL++ E+ +A+++ G G F G DI F
Sbjct: 15 DGEVLVVTIDNPPVNALRQAVRAGLQEAVEQLEQDAASRAMLIVGQGKAFIAGADIREFG 74
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K A +P+V +N +E K +VAA+ G ALGGGLE+AM H R+A P +L
Sbjct: 75 KPPMA---PFLPEV-----LNRMEAGGKLVVAAIHGPALGGGLEVAMATHYRLALPGAKL 126
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
GLPE+ LG++PG TQR PRL+G A E+ML K ++++ GL+D +V ++ +
Sbjct: 127 GLPEVNLGLLPGAGGTQRSPRLMGALPAAELMLSGKHLSAKAALAAGLVDKLVEGDDPVA 186
Query: 189 VSRLWALDI-AARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDV 247
+ ++ A+ +P R + + + +LA+ AKKT + ++
Sbjct: 187 AGLAYVRELLASGTQP--RRTCDLEVADKAAALAALDQLAQDTAKKTR-GLFSPAKIIEC 243
Query: 248 IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRK 307
++ + GV +E ++F E + GLVH FFA+R T+K+P PR K
Sbjct: 244 VKAAVQMPFAEGVKRERELFLECLNSPQRAGLVHAFFAERETAKIPEAR--AAAPRHFAK 301
Query: 308 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 367
+A+IGGG MG+GI A + + VV+ E ++E + +G K +E GL+ +G++T +
Sbjct: 302 LAIIGGGTMGAGITVAALDAGLSVVMIERDAESIARGRKNVEKVYDGLIAKGRMTAEAKA 361
Query: 368 NALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 427
+ + Y + KDVD+VIEAV E + +K+ +F EL++ C +LATNTS +D++
Sbjct: 362 ATMARYQPSTSYDDIKDVDLVIEAVFEDIEVKKAVFKELDRVCKSGAVLATNTSYLDIDA 421
Query: 428 VGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 487
+ TS +IG HFFSPA++M LLEIV + + V++ + K +KKVPV G C
Sbjct: 422 IAAVTSRPQDVIGLHFFSPANIMKLLEIVVPAKVAPDVVVTAFELAKRMKKVPVRAGVCD 481
Query: 488 GFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEF 547
GF NR Y ++A ++ G + ID+A+R FG P+GPFQ+ DLAG + AT K
Sbjct: 482 GFIGNRILSVYREAANYMLEDGASPYEIDAAVREFGYPMGPFQVSDLAGGDIGWATRKRK 541
Query: 548 DKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKP-KPDPSVLPIIEECRRLSNI 606
R+ + D + + G G+ G+G Y Y +G++ + DP VL I++ R I
Sbjct: 542 AATRDPRARYVEIADRIAERGWYGQKTGRGWYLYPEGARTGQQDPEVLAIVDAERTKKGI 601
Query: 607 MPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVF 666
P + T +EI+ + +VNE +VLEEGI +R D+D + G FP +RGG +
Sbjct: 602 TPR----AFTHEEIMRRYMAAMVNECAKVLEEGIALRPLDIDVTFLFGYGFPRWRGGPMQ 657
Query: 667 WADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
WAD G V ++ +++ F++P+ L++ +G
Sbjct: 658 WADMQGLPKVLADIEAFAKEDALFWQPAPLLKKLVAEG 695
>gi|334140782|ref|YP_004533988.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Novosphingobium sp.
PP1Y]
gi|333938812|emb|CCA92170.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Novosphingobium sp.
PP1Y]
Length = 709
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 238/696 (34%), Positives = 372/696 (53%), Gaps = 42/696 (6%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
D VA+ITL NPPVNAL+ + AGL + E + + A V+ G F G DIN F +
Sbjct: 25 DRVAVITLDNPPVNALSHALRAGLLAELEAVLADPAIDAAVIHCAGRTFVAGADINEFGR 84
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ + + IED KP++AA+ G +LGGG EL++ CH R+A P ++G
Sbjct: 85 P--------IAQPGFPELFSAIEDSAKPVIAAIHGTSLGGGFELSLACHYRVAVPSARVG 136
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 189
LPE+ LG++PG TQRLPRLVG A+E+M + + +EE +GL+DAV+ ++L+
Sbjct: 137 LPEVKLGILPGAGGTQRLPRLVGACAALEIMTSGRQVKAEEALAIGLLDAVLPGQDLVME 196
Query: 190 SRLWALDIAAR--RKPWIRS---LHRTDKLGSLSEAREVLKLARLQAKKTAPNM--PQHQ 242
+ +A ++ A R P +R + D+ R +K A AP +
Sbjct: 197 AVAFARNVVAEGARTPRVRDREDMLEVDRKDPELVDRFFIKNAHRFRGLDAPTAIGAAVR 256
Query: 243 ACLDV-IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 301
A L + EEG+ H E ++ L S L ++FFA+R T++VP++ ++
Sbjct: 257 AALSLPFEEGLAH--------EQQLCLALAEGHQSEALRYLFFAERQTTRVPDLPPNTMQ 308
Query: 302 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 361
R V + VIG G MG GI + + V L E + L +G I + +G++
Sbjct: 309 -RPVASIGVIGAGTMGGGITMTFLDAGLPVTLVETSKAALERGCSNIRRHYEASAQKGRM 367
Query: 362 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 421
+ D+ + +L LD + +D D VIEAV E + LK+ +F++L+ P ILA+NTS
Sbjct: 368 SADEVETRMSLLSPRLDLTALRDADFVIEAVFEDLALKRDLFAQLDALAAPDAILASNTS 427
Query: 422 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 481
+DL+ + + TS +R++G HFFSP +VM L+E+VRT RT + + M++ + I KVPV
Sbjct: 428 FLDLDAIADATSQPERVLGLHFFSPVNVMRLVEVVRTTRTKPENVATAMSLARHIGKVPV 487
Query: 482 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAA 541
+ C GF NR P A +++ G+ + RID + +G IG FQ++D+ G V
Sbjct: 488 LSAVCDGFIANRLMAPRGAEAEIMMLEGIPIERIDKVLTDYGFGIGHFQMMDMVGLDVVG 547
Query: 542 ATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECR 601
+ E R+ LV +GR G +G G Y Y+ +P P I
Sbjct: 548 RGASE-------RTVMGDLV----AAGRLGLKSGSGYYDYDGKHRPLPSKLTETTIAAVA 596
Query: 602 RLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYR 661
R ++ + V+++E++ +L PVVNE +LEEGI +RASD+D A+VLG ++P++
Sbjct: 597 REKGVIGSDQ---VSDEELLTRLLCPVVNEGAHILEEGIALRASDIDVAAVLGYNWPAHT 653
Query: 662 GGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 697
GG + WA+ G + SL+K ++G FKP+R L
Sbjct: 654 GGPMAWAEHYGLARIVESLRKLEAMHGARFKPARLL 689
>gi|433772523|ref|YP_007302990.1| 3-hydroxyacyl-CoA dehydrogenase [Mesorhizobium australicum WSM2073]
gi|433664538|gb|AGB43614.1| 3-hydroxyacyl-CoA dehydrogenase [Mesorhizobium australicum WSM2073]
Length = 686
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 262/703 (37%), Positives = 374/703 (53%), Gaps = 35/703 (4%)
Query: 7 TMEVGNDG-VAIITLINPPVNALAIPIVAGLKDKFEEATSRDD--VKAIVLTGNGGRFSG 63
++ V N+G VAI+T+ NPPVNAL+ + L RDD V AIV+ G F
Sbjct: 4 SVSVANEGGVAIVTIDNPPVNALSFHVREPLMQAL--VALRDDASVAAIVIACAGRTFVA 61
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DI F K M + +V ++E +P VAA+ G ALGGGLELA+GCH R
Sbjct: 62 GADITEFGKP--------MQQPELRAIVAVLEAIARPTVAAIHGTALGGGLELALGCHFR 113
Query: 124 IAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAV 180
+A +LGLPE+ LG++PG T RLPRLVG +KA++M++ I ++E + GL+DAV
Sbjct: 114 VADQGARLGLPEVKLGILPGGGGTVRLPRLVGAAKALKMIVSGTPIGADEAYGAGLVDAV 173
Query: 181 VTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQ 240
+ L + +A ++A + P+ R D L A + A L K P
Sbjct: 174 FEGD-LTTHAVNFAREMARKGGPFPPVRDRDDVLKETDLAAFDAEAADLARKARGLEAPI 232
Query: 241 HQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGL 300
AC + + + +E +F +LV D SR H+FFA+R +K+P +
Sbjct: 233 --ACARAVRNAVTLPFDEALAEERALFVKLVASDQSRAQRHLFFAEREAAKLPGKDVV-- 288
Query: 301 KPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGK 360
R + +V VIG G MG GIA A V L E + E L +G+ TIE N V RG
Sbjct: 289 -KRRIARVGVIGAGTMGGGIAMAFANGGFPVTLLETSQEALRRGLATIEKNYTVSVARGS 347
Query: 361 LTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 420
L++D L KG +D+++ D D+++EA E + +K++IF +L+ P ILATNT
Sbjct: 348 LSEDAKRQRLAQFKGTIDHADLADCDLIVEAAFEDMAVKKEIFGKLDAVARPGAILATNT 407
Query: 421 STIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVP 480
S +D++ + TS ++G HFFSPA+VM LLEIVR E+T+ + ++ + + I KV
Sbjct: 408 SYLDIDEIAASTSRPQDVLGLHFFSPANVMKLLEIVRAEKTAPDALATVIDLARRIGKVA 467
Query: 481 VVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVA 540
VVVG C GF NR + L+ G +ID A FG P+GPFQ+ DLAG +
Sbjct: 468 VVVGVCHGFVGNRMLAVRGSESEALLLEGATPSQIDKAFTDFGWPMGPFQMGDLAGLDIG 527
Query: 541 AATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEE 599
K R + + D L + GR G+ G+G Y YE GS+ P PDP V +I +
Sbjct: 528 WRNRKA-------RGLTAVIADTLCEQGRFGQKTGRGFYLYENGSRTPVPDPEVEALIRD 580
Query: 600 CRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPS 659
I+ P ++ EI+E L+P+VNE ++LEEGI RASD+D V G FP
Sbjct: 581 KAAEKGIV----PRTIDADEIIERTLYPLVNEGAKILEEGIAARASDIDVVWVNGYGFPI 636
Query: 660 YRGGIVFWADAVGANYVYTSLKKWSQLYG-NFFKPSRFLEERA 701
+GG +FWA GA + L+ W + G + FKP+ LE A
Sbjct: 637 GKGGPMFWAGLEGAARIVGRLRYWHERTGKDVFKPAPLLERMA 679
>gi|398812807|ref|ZP_10571521.1| 3-hydroxyacyl-CoA dehydrogenase [Variovorax sp. CF313]
gi|398076521|gb|EJL67581.1| 3-hydroxyacyl-CoA dehydrogenase [Variovorax sp. CF313]
Length = 700
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 257/698 (36%), Positives = 376/698 (53%), Gaps = 27/698 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA++TL NPPVN + + GL E A + D+ A++L G G +F GG DI F
Sbjct: 14 VAVLTLDNPPVNGIGNTVRQGLYAGIERAMADTDIDAVLLIGAGRQFCGGADIRQF-NTP 72
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
A L DV + LI KP++AA+ G+ALGGGLELA+GCH R+A+ +LGLP
Sbjct: 73 AATQKPLTRDV-----LTLIARSTKPVIAAIHGVALGGGLELALGCHYRVASADAKLGLP 127
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 191
E+ LG+IPG TQRLPRLVG++ A++++L I + +LGL++AV+ E LL +R
Sbjct: 128 EVNLGLIPGGGGTQRLPRLVGVNAALDIILSGAPIKAPRAHELGLVNAVIMGE-LLAGAR 186
Query: 192 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 251
+A + A R + + A + TA +A +D ++
Sbjct: 187 AFARRVVAEGAALPLVAQRALEPAGVDFAERRRAVPARARNATA-----QRAAVDAVQAS 241
Query: 252 IVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP---RGVRKV 308
G+ +E +F ELV S+ L H+FFA+R K+ L P R VRKV
Sbjct: 242 TQLALEDGLTRERALFDELVAGPESKALRHLFFAEREAPKLSET----LAPTELRVVRKV 297
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
AV+G G MG GIA A I VVL E + +G+ + N V +GKL++
Sbjct: 298 AVLGAGTMGGGIAMAFANAGIPVVLLEREQAAIDRGLDLVRRNYGVTVAKGKLSEAAMAG 357
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
+ +++ LD++ DVD+VIEAV E + +K+++F +L+ C P ILATNTS + ++ +
Sbjct: 358 RMALIEPALDFAALHDVDLVIEAVFEDMAVKKEVFEQLDAHCKPGAILATNTSRLSIDEI 417
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
TS +IG HFFSPA+VM LLE+VR E T VI M + + I K+PV+V C G
Sbjct: 418 ARSTSRPQDVIGLHFFSPANVMRLLEVVRGEGTLPAVIAACMKMAQDIGKIPVLVRVCEG 477
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR Y + A L+ G ++D A+ FG+ +GP + DLAG + AT K
Sbjct: 478 FVGNRMLTGYWREAGFLLEEGASPQQVDRAMTGFGMAMGPLAMADLAGMDINWATRKRLA 537
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIM 607
P S + D + ++GR G+ G Y YE GS+ P PDP V IIE C + I+
Sbjct: 538 PTRPAHLRYSKVADRICEAGRYGQKTSAGYYRYEAGSRTPIPDPLVDMIIESCAAEAGIV 597
Query: 608 PGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFW 667
+V +++IVE + +VNE R+L+EG+ RASD+D V G FP+ RGG +FW
Sbjct: 598 RH----TVRDEDIVERCVLALVNEGVRILDEGVAQRASDIDVVYVHGYGFPASRGGPMFW 653
Query: 668 ADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGI 705
A+ +G ++ +G + P+ L ER +G+
Sbjct: 654 AETLGLAQTLERIRALQATHGAHWTPAPGLVERVERGL 691
>gi|365091125|ref|ZP_09328632.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Acidovorax sp. NO-1]
gi|363416243|gb|EHL23363.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Acidovorax sp. NO-1]
Length = 699
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 256/703 (36%), Positives = 382/703 (54%), Gaps = 31/703 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA+ITL NPPVN L + G+ + A + V +IV+TG GG FSGG DI F
Sbjct: 11 VAVITLANPPVNGLGLSTRQGIVEGLGRANADAAVTSIVITGAGGAFSGGADIKEF---- 66
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G + + ++ V+ IE+ KP+VAA+ +A+GGGLELA+GCH RIAAP + LP
Sbjct: 67 --GTDKSLQEPNLLSVIAAIENSAKPVVAAMHSVAMGGGLELALGCHYRIAAPGCSIALP 124
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSE-----EGWKLGLIDAVVTSEEL 186
E+ LG+IPG TQRLPR++G+ A+ +++ + + SE G KL ++E L
Sbjct: 125 EVKLGLIPGAGGTQRLPRVIGVEAALNLIVSGEPVKSEMIGAVPGQKL-FDKMAASAESL 183
Query: 187 LKVSRLWALDIA-ARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACL 245
+ +A +A AR P +R+ E + AR K A N P C+
Sbjct: 184 AAEALAFAQSVADARPLPLVRNFPCKH-----PEGDAYFQFARNMVKGMAKNFPAPAKCV 238
Query: 246 DVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGV 305
D +E G+L E ++F L+ SR L H+F A+RA SK+P+V K R +
Sbjct: 239 DAVEAATKKKFAEGMLVEREIFINLMWTPESRALRHLFMAERAASKIPDVASDTPK-RDI 297
Query: 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDK 365
+ V VIG G MG GI+ + I V + E+ E L +G+ TI+ N V +GKL QDK
Sbjct: 298 KLVGVIGAGTMGGGISMNFLNAGIPVKILEMKQEALDRGVATIKKNYEAQVKKGKLKQDK 357
Query: 366 ANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL 425
+ +L L Y + KD D++IEAV E + +K+ +F +L+ P ILA+NTST+D+
Sbjct: 358 YEQRMALLSTTLSYDDLKDCDLIIEAVFEEMGVKEAVFKQLDAVAKPGAILASNTSTLDV 417
Query: 426 NIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 485
+ + T ++G HFFSPA+VM LLE+VR + T+ V+ +M +GK IKK VV G
Sbjct: 418 DKIAAFTKRPQDVVGMHFFSPANVMKLLEVVRGKETAKDVLATVMAIGKKIKKTSVVSGV 477
Query: 486 CTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSK 545
C GF NR YS+ A L+ G ++D AI FG +GPF++ DLAG + A K
Sbjct: 478 CDGFIGNRMIEQYSRQAGFLLDEGCTPQQVDKAIEKFGFAMGPFRMGDLAGNDIGWAIRK 537
Query: 546 EFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVLPIIEECRRLS 604
D + S D L + GR G+ G G Y Y+ G + P V +IE+ R+
Sbjct: 538 RRAVERADMKY-SRTADKLCELGRFGQKTGAGWYDYQAGKRDAIPSDLVNKMIEDHRKEL 596
Query: 605 NIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGI 664
I P ++++EIV+ ++F +VNE +LE+GI ++ D+D + G FP +RGG
Sbjct: 597 GITPR----KISDEEIVQRLVFALVNEGAHILEDGIASKSGDIDMVYLTGYGFPIHRGGP 652
Query: 665 VFWADAVGANYVYTSLKKWSQL---YGNFFKPSRFLEERATKG 704
+ +A VG V ++ ++++ F+KP+ L + A +G
Sbjct: 653 MHYASEVGLFNVVQAMDRFAKNPLDDAAFWKPAPLLAKLAAEG 695
>gi|301630327|ref|XP_002944273.1| PREDICTED: peroxisomal bifunctional enzyme-like [Xenopus (Silurana)
tropicalis]
Length = 1251
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 240/685 (35%), Positives = 369/685 (53%), Gaps = 28/685 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+ +I + NPPVNAL+ P V GL + +RDD+ A+VL G G + G DI F
Sbjct: 570 IGLIAIDNPPVNALSTPAVEGLTAALAQFEARDDLDALVLYGLGRTWIAGGDITAFDSPA 629
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G P + + +E +P+V A+ G ALGGGLELAM CH R+A P T++GLP
Sbjct: 630 G------FPVAAFNAFLERLEAQNRPVVVALHGTALGGGLELAMACHWRVAQPGTRVGLP 683
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE-ELLKVS 190
E+ +G+IPG TQRLPRL G + A++++ + + + + + GLIDA+ E ++ ++
Sbjct: 684 EVKIGIIPGSLGTQRLPRLAGGTLALDLITSGRMVGAAQAHQAGLIDALAEGEPRVIGIA 743
Query: 191 RLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 250
AL + + L R +L + E L A A + P PQ A + +
Sbjct: 744 AAQALLQSGQ------PLRRASQLTAAPAPAEALAKAEATAAQK-PGWPQLAAAVRCVRA 796
Query: 251 GIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKVA 309
G EA F +LV +++ L H+FFA+R +K+ + D L+P +RKV
Sbjct: 797 AQALPFVQGQAVEAAEFAQLVTSPSAKALRHLFFAEREVAKISALPCDTALRP--IRKVG 854
Query: 310 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 369
++G G MG GIA I V+ EVN E L +G+ + N +G+LT ++
Sbjct: 855 IVGAGTMGGGIAMNFANVGIPTVVVEVNDETLQRGLGLVRRNYEASAAKGRLTAEQVAGR 914
Query: 370 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 429
+ +L+G LDY+ + D+VIEAV E++ LKQ I ++L P I+ATNTST+D++++
Sbjct: 915 MALLQGALDYAALAECDLVIEAVFENMALKQDICAKLGAVAKPGAIIATNTSTLDVDVLA 974
Query: 430 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 489
T ++G HFFSPAHVM LLE+VR T+ V+ +M + I KVPVV G C GF
Sbjct: 975 RATGRSADVVGMHFFSPAHVMRLLEVVRGAATAPDVLATIMKLAARIGKVPVVSGVCYGF 1034
Query: 490 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDK 549
NR Y + A L+ G + ++D+A+ + G +GP ++LD+AG V A T E+ K
Sbjct: 1035 IGNRMAEVYMREAEFLIMEGAEPAQVDAAVEALGFAMGPCRMLDMAGVDVGAKTVIEYGK 1094
Query: 550 AF---PDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNI 606
A PD S+++ LV L GR+G+ G G Y Y G P PD V I + I
Sbjct: 1095 AGGLPPDASYRA-LVQKLFALGRHGQKTGAGYYRY-AGRTPVPDAEVTRIATQLAEQHGI 1152
Query: 607 MPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVF 666
+ + + EI E +L+P++NE ++L+EGI R D+D G FP +RGG ++
Sbjct: 1153 T---RRSDIGQDEITERLLYPLINEGWKILDEGIAYRPGDIDVVWTAGYGFPDFRGGPMW 1209
Query: 667 WADAVGANYVYTSLKKWSQLYGNFF 691
A+++G + + ++ G+ +
Sbjct: 1210 MAESMGREVIAKRIAHYAATRGDAY 1234
>gi|46309503|ref|NP_996951.1| peroxisomal bifunctional enzyme [Danio rerio]
gi|82185947|sp|Q6NYL3.1|ECHP_DANRE RecName: Full=Peroxisomal bifunctional enzyme; Short=PBE;
Short=PBFE; Includes: RecName: Full=Enoyl-CoA
hydratase/3,2-trans-enoyl-CoA isomerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|42542964|gb|AAH66545.1| Enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
[Danio rerio]
Length = 718
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 260/722 (36%), Positives = 388/722 (53%), Gaps = 48/722 (6%)
Query: 9 EVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDIN 68
E+ VA+ITL NPPVNAL+ + + E A S V A+V+ G GRF GG DI
Sbjct: 5 ELVKRSVALITLTNPPVNALSSAVRHAISKTMERALSDPKVTAVVICGENGRFCGGADIR 64
Query: 69 VFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPK 128
F AG + P V + ++ IE +KP+VAA+EG+ALGGG ELA+ CH RIA K
Sbjct: 65 EF-----AGPLRGPPLVPL---LDAIEAGEKPVVAAIEGVALGGGFELALVCHYRIAHYK 116
Query: 129 TQLGLPELTLGVIP---GTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEE 185
+LGLPE+TLG++P GTQRLPRL+G+ A+E++ + ++++E KLG++D V T +
Sbjct: 117 ARLGLPEVTLGILPAAGGTQRLPRLIGIPAALELITTGRHVSAQEALKLGMVDQV-TEQN 175
Query: 186 LLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEA--REVLKLARLQAKKTAPNMPQHQA 243
+V+ +AL KP S R L + + + A +Q +K A + A
Sbjct: 176 TCEVALEFALKAVG--KPL--SSRRLSMLTTPCPPGLDGIFEAATMQVQKKARGVMAPLA 231
Query: 244 CLDVIEEGIVHGGYS-GVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK--VPNVTDIG- 299
C+ + + YS G+ +E ++ L ++ L + FFAQR K +P+
Sbjct: 232 CVQAVRAATLP--YSEGIKREGELMATLFSSGQAQALQYSFFAQRTAEKWTLPSGAQWNN 289
Query: 300 LKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRG 359
KPR ++ AVIG G MG GI + L + + + V SE L ++T V G++ R
Sbjct: 290 SKPREIQSAAVIGLGTMGRGIVVS--LARVGISVIAVESEKKL--LETGRQMVIGMLER- 344
Query: 360 KLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATN 419
+ + +L +LK L + KDVD+VIEAV E + LK++IF EL + C P +L +N
Sbjct: 345 DAKRRGVSASLNLLKFSLSLQDLKDVDLVIEAVFEDMALKKQIFRELSRVCRPATLLCSN 404
Query: 420 TSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKV 479
TS +D++ + + T + G HFFSPAHVM LLE+V R+S + I M++GK + KV
Sbjct: 405 TSGLDVDALADVTDRPQLVAGMHFFSPAHVMKLLEVVCGPRSSKEAIATAMSLGKRMGKV 464
Query: 480 PVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGV 539
V VGNC GF NR PY + A L+ G +ID A+ FG +G F++ DLAG V
Sbjct: 465 SVAVGNCPGFVGNRMLMPYLEQATFLLEEGATPQQIDKALEDFGFAMGVFRMSDLAGLDV 524
Query: 540 AAATSKE-------FDKAFPDRSFQ----SPLVDLLLKSGRNGKANGKGLYTYEK--GSK 586
KE D P R Q P+ D++ + GR G+ G+G Y Y+K +
Sbjct: 525 GWRVRKESGLTGPDVDPKDPPRRRQGRKYCPIPDMVCQQGRFGQKTGRGWYMYDKPGDTN 584
Query: 587 PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASD 646
KPDP + ++E R I +P +T++EI+E LF + NE R+L++ I + D
Sbjct: 585 AKPDPLIQNLLETYRSRYGI----QPRKITDQEIIERCLFALANEGFRILKDKIAGQPED 640
Query: 647 LDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN--FFKPSRFLEERATKG 704
+D + G FP +RGG +F+A VG V L+ + + +PS L++ +G
Sbjct: 641 IDVIYLFGYGFPRHRGGPMFYASMVGLERVLERLEYYHHALPDVPHLEPSPLLKKLVARG 700
Query: 705 IP 706
P
Sbjct: 701 SP 702
>gi|172061837|ref|YP_001809489.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia ambifaria MC40-6]
gi|171994354|gb|ACB65273.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia ambifaria
MC40-6]
Length = 711
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 238/699 (34%), Positives = 361/699 (51%), Gaps = 23/699 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D V ++T+ +PPVNAL+ + GL D + A + D ++A+++ G G F G DI F
Sbjct: 20 RDKVLVVTIDHPPVNALSADVRRGLADALDAAQTDDAIRAVLIVGAGRNFIAGADIREFG 79
Query: 72 KVHGAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKT 129
K P V L V IE KP+V A+ G LGGGLE+A+ H R+A P
Sbjct: 80 K----------PPVPPSLPDVCEQIESSAKPVVVALHGATLGGGLEVALAAHYRLAVPGA 129
Query: 130 QLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL 186
+LGLPE+TLG++PG TQR PRL+G A+++ML + +++E LGL+D + S++
Sbjct: 130 KLGLPEVTLGLLPGAGGTQRAPRLIGAKAALDLMLTGRHASADEALALGLVDRLAHSDDT 189
Query: 187 LKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLD 246
L +A ++ + P R+ L + A+ + AR K + + +D
Sbjct: 190 LAEGLAYAQELVSLGAPARRT-REARGLADRASAQAAIDAARADLPKKSRGLFSPAKIVD 248
Query: 247 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 306
+E + +G+ E +F + + GLVH FFA+R +K P +P V
Sbjct: 249 AVEAALTQSFDAGMKLERSLFLQCIDSPQRAGLVHAFFAEREAAKAPEARRASARP--VE 306
Query: 307 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 366
++ V+GGG MG+GIA A + + V + E + L +G +E GLV +G++T
Sbjct: 307 RIGVVGGGTMGAGIAVAALDAGLPVTMIERDEASLARGRAHVEKVYDGLVAKGRMTPAAH 366
Query: 367 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 426
L KG Y D+VIEAV E + +K+ +F+EL + C P +LATNTS +D++
Sbjct: 367 AARLARFKGSTSYDALAQADVVIEAVFEDMAVKKAVFAELARVCKPGAVLATNTSYLDID 426
Query: 427 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 486
+ ++G HFFSPA+VM LLEIV R SA+V+ + K +KK PV G C
Sbjct: 427 ELAATIDRPADVVGLHFFSPANVMKLLEIVVPARVSAEVVATAFALAKQLKKTPVRAGVC 486
Query: 487 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKE 546
GF NR Y +A L+ G ++ID A+R FG P+GPFQ++DLAG + AT K
Sbjct: 487 DGFIGNRILAVYRTAADYLMEDGASPYQIDRAVREFGFPMGPFQVVDLAGGDIGWATRKR 546
Query: 547 FDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSN 605
R+ + D L + G G+ +G Y Y G++ PDP V I + R
Sbjct: 547 RAATRDPRARYVEISDRLCERGWFGQKTARGYYLYPDGARVGTPDPEVEAIAADERAKKG 606
Query: 606 IMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIV 665
I P + ++ EI+ L ++NE V+ E I +R D+D + G FP YRGG +
Sbjct: 607 ITPR----AFSDDEILRRYLAAMINEGANVVHEKIALRPLDVDAVFLHGYGFPRYRGGPM 662
Query: 666 FWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+AD VG V ++ ++ F+KPS + E +G
Sbjct: 663 HYADTVGLANVLADIRAFANEDPLFWKPSPLIVELVERG 701
>gi|319791569|ref|YP_004153209.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase protein [Variovorax
paradoxus EPS]
gi|315594032|gb|ADU35098.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Variovorax
paradoxus EPS]
Length = 711
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 238/708 (33%), Positives = 374/708 (52%), Gaps = 20/708 (2%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
VT E D V ++T+ NPPVNAL + + GL A + +A+++ G G F G
Sbjct: 15 VTFERLGD-VFVVTIDNPPVNALGVDVRRGLVAAIAAAEADSAARAVLIVGAGRNFIAGA 73
Query: 66 DINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA 125
DI F K A +P+ + IE+C KP+VAA+ G ALGGGLE+A+ H RIA
Sbjct: 74 DIREFGKPPQAPS---LPEACLA-----IENCTKPVVAAIHGAALGGGLEVALSAHYRIA 125
Query: 126 APKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 182
+P +LGLPE+ LG++PG TQR PRL+G+ A+E+ML + ++E LGL+D + T
Sbjct: 126 SPTAKLGLPEVALGLLPGSGGTQRAPRLIGVKPALELMLSGRHAGAKEALSLGLVDRLGT 185
Query: 183 SEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQ 242
+ +A ++ A + P +R L +R L+ AR K + +
Sbjct: 186 EADARAEGLAYAEELVAAKAP-VRRTREAAGLADKEASRAALEAARTDTAKKSRGLFSPM 244
Query: 243 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 302
++ +E + G+ E K+F + + GL+H FFA+R K P P
Sbjct: 245 KIVEAVEGALTLPFDEGMALERKLFMQCIDSPQRAGLIHAFFAEREVLKAPETKSA--NP 302
Query: 303 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 362
R + ++GGG MG+GIA A + + V + E + L +G + +E GL+ +G++T
Sbjct: 303 RKLESAGIVGGGTMGAGIAVAMLDAGLPVTMIERDEPSLARGRQHVEKVYDGLIAKGRMT 362
Query: 363 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 422
+ + G Y +VD+V+EAV E + +K+ +F+EL++ C P +LATNTS
Sbjct: 363 PEAKAAVMARFSGSTSYDALANVDIVVEAVFEEMGVKKAVFAELDRVCKPGAVLATNTSY 422
Query: 423 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 482
+D++ + ++G HFFSPA++M LLEIV + SA V+ + K +KKVPV
Sbjct: 423 LDIDEIAASIKRPQDVVGLHFFSPANIMKLLEIVVPAKVSADVVATGFELAKKLKKVPVR 482
Query: 483 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAA 542
G C GF NR Y Q+A ++ G ++ID A+R FG P+GPFQ+ DLAG + A
Sbjct: 483 AGVCDGFIGNRILAVYRQAADHMMEDGASPYQIDEAVREFGYPMGPFQVSDLAGGDIGWA 542
Query: 543 TSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKP-KPDPSVLPIIEECR 601
T K ++ + D + + G G+ +G Y Y +G++ PDP+VL II+ R
Sbjct: 543 TRKRKAATRDPQARYVQIADRICERGWFGQKTQRGYYLYPEGARTGSPDPAVLAIIDAER 602
Query: 602 RLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYR 661
+ I+ S T +EI+ + +VNE V+ + I +R D+D + G FP +R
Sbjct: 603 ERAGIV----RRSFTNEEIIRRYMAAMVNEGANVVLQRIALRPLDVDVTFLYGYGFPRHR 658
Query: 662 GGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSA 709
GG + +AD VG V ++++++ F+KPS L E +G S+
Sbjct: 659 GGPMKYADTVGLPKVLADIREFAKEDPIFWKPSPLLVELVERGADFSS 706
>gi|348027575|ref|YP_004870261.1| fatty oxidation complex subunit alpha [Glaciecola nitratireducens
FR1064]
gi|347944918|gb|AEP28268.1| fatty oxidation complex, alpha subunit [Glaciecola nitratireducens
FR1064]
Length = 702
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 260/711 (36%), Positives = 393/711 (55%), Gaps = 25/711 (3%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
V+ E+ D + +I L NPPVNAL+ + G++D +A D A+VL G F G
Sbjct: 4 VSYELVGD-IGVIRLNNPPVNALSHALRIGVQDAVSKAQD-DSSLALVLICEGRTFIAGA 61
Query: 66 DINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA 125
DI+ F G +MP + EL+++ IE KKPI+AA+ G ALGGGLE A+ CH R A
Sbjct: 62 DISEF------GKAPMMPSLP-ELLID-IESSKKPIIAAIHGTALGGGLETALACHYRCA 113
Query: 126 APKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 182
P Q+GLPE+ LG++PG TQR+PRLVG+ A++++ I + + +GLID VV
Sbjct: 114 LPSAQVGLPEVKLGLLPGAGGTQRVPRLVGVKAALDLITSGTPIAASKALSIGLIDKVVD 173
Query: 183 SEELLKVSRLWALDIAARRKPWIR-SLHRTDKLGSLSEA-REVLKLARLQAKKTAPNMPQ 240
+ LL + +A ++ + + S +K G E E+ R+ K
Sbjct: 174 GD-LLSGALEFAKEVIEQGATLKKISDLEVEKQGDSPEFFSELFAEWRITLSKRYRGQEA 232
Query: 241 HQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIG 299
Q +D IE + G+ E ++F E + S L H+FFA+R +SKV + D
Sbjct: 233 PQRIVDCIEAAVNKPFNEGLKIERELFMECMQSSQSAALRHLFFAERMSSKVNGLPKDTQ 292
Query: 300 LKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRG 359
LK +++V +IGGG MG GIA + I V L E+N E L +G I N V++G
Sbjct: 293 LK--DIKRVGIIGGGTMGGGIAMNFVNVGIPVTLLEINDEALQRGKDIIAKNYAITVSKG 350
Query: 360 KLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATN 419
KL+ + A+ M+ G DY+E ++D+VIEAV E++ +K+++F +L+ C ILATN
Sbjct: 351 KLSAELADERQGMITGTTDYNELANMDLVIEAVFENLDIKKQVFKKLDAVCKQGAILATN 410
Query: 420 TSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKV 479
TS D++++ + TS +IG HFFSPA+VM LLEIVR E TS QV+ M V K IKKV
Sbjct: 411 TSYQDVDLIAQATSRPQDVIGLHFFSPANVMKLLEIVRGEHTSDQVLATSMAVAKSIKKV 470
Query: 480 PVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGV 539
P + C GF NR PY + ++L + G IDS ++ FG+ +GP + DLAG +
Sbjct: 471 PALSRVCYGFIGNRMLRPYVRESQLCLLEGSTPQAIDSVMQRFGMAMGPLAVSDLAGIDI 530
Query: 540 AAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVLPIIE 598
+ + D L + GR G+ G G Y Y+ ++ + PDP VL +IE
Sbjct: 531 GYKAREGLSDEQKGDIRTYCIADALYEMGRLGQKTGAGFYQYDPNTRQRIPDPKVLEVIE 590
Query: 599 ECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFP 658
E + + + + I++ + F ++NE ++LEEGI R SD+D V G FP
Sbjct: 591 EQAEKRGV----ERKDILDHTILQRLTFALINEGFKILEEGIAQRPSDIDVVYVFGYGFP 646
Query: 659 SYRGGIVFWADAVGANYVYTSLKKWSQLYG-NFFKPSRFLEERATKGIPLS 708
+YRGG +F+AD +G VY ++ ++S+ YG F++P+ L++ +G L+
Sbjct: 647 AYRGGPMFYADTIGLETVYKTICEFSKTYGEEFWQPAALLKQLVEEGKTLT 697
>gi|307729102|ref|YP_003906326.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Burkholderia
sp. CCGE1003]
gi|307583637|gb|ADN57035.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Burkholderia
sp. CCGE1003]
Length = 706
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 246/704 (34%), Positives = 371/704 (52%), Gaps = 39/704 (5%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
V ++T+ +PPVNAL+ + GL E A S ++A++L G G F G DI F K
Sbjct: 18 VLLVTIDHPPVNALSADVRRGLLSAVEAADSDASIEAVLLVGAGRNFIAGADIREFGK-- 75
Query: 75 GAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
P V L V N IE KP+VAA+ G ALGGGLE+A+ H RIAA +LG
Sbjct: 76 --------PPVPPSLPDVCNRIEASTKPVVAALHGAALGGGLEVALAAHYRIAAEGARLG 127
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK- 188
LPE+ LG++PG TQR PRL+G A+++ML + +++E GL+D + SE++L
Sbjct: 128 LPEVQLGLLPGAGGTQRTPRLIGAQAALDLMLSGRHASAKEALAWGLVDRLGASEDILAE 187
Query: 189 ----VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 244
V L A AARR L + + + AR Q +K A +
Sbjct: 188 GLAYVHELLASHAAARRT------RDASALSDRTASLAAVAAARAQTEKQARGLFSPLKI 241
Query: 245 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRG 304
+D +E I G+ E ++F + + GL+H FFA+R K P KPR
Sbjct: 242 VDAVEAAITQPFEDGLRLERQLFLQCIDSPQRVGLIHAFFAEREVLKAPETR--AAKPRP 299
Query: 305 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 364
+ + V+GGG MG+GIA A + + V + E + L +G IE GL+ +G+++
Sbjct: 300 LETIGVVGGGTMGAGIAVAVLGAGLPVTMIERDEASLARGRAHIEKVYDGLIAKGRMSAA 359
Query: 365 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 424
K L G + + D+VIEAV E + +KQ +F+EL++ C +LATNTS +D
Sbjct: 360 KKAELLARFTGSTSHEALANADLVIEAVFEDLAVKQAVFAELDRVCKAGAVLATNTSYLD 419
Query: 425 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 484
++ + TS +IG HFFSPA++M LLE+V SA V+ + K ++K PV G
Sbjct: 420 IDAIAAGTSRPADVIGLHFFSPANIMKLLEVVVPRAVSADVVATAFELAKKLRKTPVRAG 479
Query: 485 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATS 544
C GF NR Y +A ++ G ++ID+A+R+FG P+GPFQ++DLAG + A
Sbjct: 480 VCDGFIGNRILAVYRSAADAMMEDGASPYQIDAAVRAFGFPMGPFQVVDLAGGDIGWAAR 539
Query: 545 KEFDKAFPDRSFQSPLV---DLLLKSGRNGKANGKGLYTYEKGSKP-KPDPSVLPIIEEC 600
K + P R+ + V D L + G G+ G+G Y Y +GS+ +PDP V II+
Sbjct: 540 K---RRAPTRNPAARYVQIADRLCERGWFGQKTGRGFYLYPEGSRSGQPDPEVEAIIDIE 596
Query: 601 RRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSY 660
R + I P + T+ EI+ + ++NE V+ EGI +R D+D + G FP Y
Sbjct: 597 RARAGITPR----TFTDDEIIRRYMAAMINEGANVVHEGIALRPLDVDVTFLYGYGFPRY 652
Query: 661 RGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
RGG + +AD VG + ++++++ F++ S L E +G
Sbjct: 653 RGGPMKYADMVGLPRILADIREFAKEDPLFWQASPLLVELVERG 696
>gi|222622588|gb|EEE56720.1| hypothetical protein OsJ_06222 [Oryza sativa Japonica Group]
Length = 273
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 174/273 (63%), Positives = 226/273 (82%), Gaps = 1/273 (0%)
Query: 450 MPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLG 509
MPLLEIVRTE+TS Q ILDL+TVGK+IKKVPVVVGNCTGFAVNR FFPY+Q + LLVS+G
Sbjct: 1 MPLLEIVRTEKTSPQAILDLITVGKMIKKVPVVVGNCTGFAVNRTFFPYTQGSHLLVSIG 60
Query: 510 VDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGR 569
+DVFRID I SFG+P+GPFQL DLAGYGVA A + AF R+ S LVDL++++GR
Sbjct: 61 IDVFRIDRVISSFGMPMGPFQLQDLAGYGVALAVKDIYAAAFGTRNLDSNLVDLMVQNGR 120
Query: 570 NGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVV 629
GK+NGKG Y YEKG KPKPDPSV +I+E RR + MPGGKP+++++++I+EMI FPVV
Sbjct: 121 QGKSNGKGYYLYEKGGKPKPDPSVQVVIDEYRRCAKTMPGGKPVTLSDQDILEMIFFPVV 180
Query: 630 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 689
NE+CRV++E +V+RASDLD AS+LGM FP +RGG+VFWAD +GA Y+++ L KW+++YG+
Sbjct: 181 NEACRVMDENVVIRASDLDIASILGMGFPKFRGGLVFWADTIGAPYIHSKLSKWTEIYGD 240
Query: 690 FFKPSRFLEERATKGIPLSAP-VSSSSTSRARL 721
FFKPS +LE+RA + +PLSAP + ++SR+R+
Sbjct: 241 FFKPSSYLEDRAKRSLPLSAPNATQQASSRSRM 273
>gi|187924712|ref|YP_001896354.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia phytofirmans PsJN]
gi|187715906|gb|ACD17130.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia
phytofirmans PsJN]
Length = 706
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 240/699 (34%), Positives = 371/699 (53%), Gaps = 29/699 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
V ++T+ + PVNAL+ + GL E A + V+A+++ G G F G DI F K
Sbjct: 18 VLLVTIDHAPVNALSADVRRGLLAAIEAADADKAVEAVLIVGAGRNFIAGADIREFGK-- 75
Query: 75 GAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
P V L V N IE C KP+VAA+ G ALGGGLE+A+ H RIA +LG
Sbjct: 76 --------PPVPPSLPDVCNRIEACTKPVVAAIHGAALGGGLEVALAAHYRIAVDGAKLG 127
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 189
LPE+ LG++PG TQR PRL+G A++++L + +++E GLID + +S+++L
Sbjct: 128 LPEVQLGLLPGAGGTQRTPRLIGAQAALDLILSGRHASAKEALAFGLIDRLGSSDDILAE 187
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSE---AREVLKLARLQAKKTAPNMPQHQACLD 246
+ ++ A P + RT +LS+ + + AR + K + + +D
Sbjct: 188 GLAYVHELLAAHAP----VRRTRDAAALSDRAASLAAVATARAETAKKSRGLFSPLKIVD 243
Query: 247 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 306
+E I G+ E K+F E + GL+H FFA+R K P KPR +
Sbjct: 244 AVEAAIEQPFDEGLRVERKLFLECIDSPQRAGLIHAFFAEREVLKAPETR--AAKPRTLN 301
Query: 307 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 366
+ V+GGG MG+GIA A + + V + E + L +G IE GL+ +G+L+ +K
Sbjct: 302 TIGVVGGGTMGAGIAVAVLDAGLPVTMIERDDASLARGRAHIEKVYDGLIAKGRLSAEKK 361
Query: 367 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 426
+ G Y D+VIEAV E + +KQ +F+EL++ C +LATNTS +D++
Sbjct: 362 AALMSRWSGSTSYDALAGADLVIEAVFEDLAVKQAVFAELDRVCKAGAVLATNTSYLDID 421
Query: 427 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 486
+ S +IG HFFSPA++M LLE+V ++ SA V+ + K ++K PV G C
Sbjct: 422 ALASSVSRPADVIGLHFFSPANIMKLLEVVVPKQVSADVVATAFELAKKLRKTPVRAGVC 481
Query: 487 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKE 546
GF NR Y +A ++ G ++ID+A+R+FG P+GPFQ++DLAG + A K
Sbjct: 482 DGFIGNRVLAVYRSAADAMMEDGASPYQIDAAVRAFGFPMGPFQVVDLAGGDIGWAARKR 541
Query: 547 FDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKP-KPDPSVLPIIEECRRLSN 605
+ + D L + G G+ +G+G Y Y +GS+ PDP V II+ R +
Sbjct: 542 RAATRNPAARYVQIADRLCERGWFGQKSGRGFYLYPEGSRSGTPDPEVEAIIDAERARAG 601
Query: 606 IMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIV 665
I P S T++EI+ + ++NE V+ E I +R D+D + G FP YRGG +
Sbjct: 602 ITPR----SFTDEEIIRRYMAAMINEGANVVHERIALRPLDVDVTFLYGYGFPRYRGGPM 657
Query: 666 FWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+AD VG + ++++++ F+KPS L E +G
Sbjct: 658 KYADMVGLPKILADIREFAKEDPLFWKPSPLLIELVERG 696
>gi|332308240|ref|YP_004436091.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Glaciecola sp.
4H-3-7+YE-5]
gi|332175569|gb|AEE24823.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Glaciecola sp.
4H-3-7+YE-5]
Length = 705
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 245/716 (34%), Positives = 382/716 (53%), Gaps = 34/716 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+ ++TL N PVNAL+ + +G+ D A S D KAI++ GNG F G DI F +
Sbjct: 12 IGLLTLNNAPVNALSHSLRSGIVDALRMA-SLDQSKAIIIVGNGAMFCAGADIREFSQTP 70
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
A S+ V IE+ +KP++AA+ G ALGGGLELA+ CH R A +LGLP
Sbjct: 71 QAP--------SLVDVTECIENMQKPVIAAIHGNALGGGLELALACHYRCALASAKLGLP 122
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT-SEELLKVS 190
E+ LG++PG TQR PR++GL A ++ +E+ +GLID +V ++L+ +
Sbjct: 123 EVKLGILPGAGGTQRAPRIIGLEHAFTLITSGNPCKAEKALSIGLIDHLVEHDQDLVAAA 182
Query: 191 RLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 250
+ +A + P RS ++ K A L + PQH +D +E+
Sbjct: 183 QKYAQQVLNEGLPIRRSSQSPIDKQNIDSDWFDKKRAELSKRARGQIAPQH--IVDCLEK 240
Query: 251 GIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT-DIGLKPRGVRKVA 309
+ G+ E + F V + ++ + H+FFAQR +KV V+ D +P ++ VA
Sbjct: 241 ALNAEFVEGMQFEREAFLNCVTSEQAKAMRHLFFAQRLAAKVKEVSPDTSKRP--IKSVA 298
Query: 310 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 369
+IG G MG GIA I V L E+++E L KG++ IE N V++G+L++ +
Sbjct: 299 IIGAGTMGGGIAMNFANVGIPVTLLELSAESLTKGLQLIEKNYAISVSKGRLSESQKAQR 358
Query: 370 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 429
L ++ G Y E VD+VIEAV E V +K+++F +L++ C ILATNTS D++ +
Sbjct: 359 LALISGSTSYQELNQVDLVIEAVFEDVEIKKQVFRKLDEVCKVGAILATNTSYQDVDAIA 418
Query: 430 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 489
+ T +IG HFFSPA+VM LLE+VR +T+ VI M + I K+PV+ G C GF
Sbjct: 419 QVTKRPQDVIGLHFFSPANVMKLLEVVRGAQTADDVITTSMALATTIAKIPVLSGVCYGF 478
Query: 490 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDK 549
NR Y + ++L + G ++DSA+ ++G +GP + DLAG + +
Sbjct: 479 IGNRLLSVYLRQSQLCLLHGATPEQVDSAMTNWGAAMGPLAMNDLAGIDIGFKAR----Q 534
Query: 550 AFPDRSFQSP----LVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVLPIIEECRRLS 604
D SP + D + +GR G+ G Y Y+ ++ + DP L IIE +
Sbjct: 535 GLSDDKKGSPEVYAIADAMYHAGRLGQKTAVGYYRYDPETRARINDPDALAIIE-----A 589
Query: 605 NIMPGGKPISV-TEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGG 663
G P + TE+EI+ ++ +VNE VL +GI R+SD+D + G FP+YRGG
Sbjct: 590 QSAKFGIPRNAQTEQEILNRMIIALVNEGANVLHDGIAQRSSDIDLVYIFGYGFPAYRGG 649
Query: 664 IVFWADAVGANYVYTSLKKWSQLYGN-FFKPSRFLEERATKGIPLSAPVSSSSTSR 718
+ +AD++G V+ + ++ +GN ++ PS L+E A K + S + S S+
Sbjct: 650 PMHYADSIGTKKVFEMVCDFASKFGNTYWTPSPLLKELAEKNLSFSDWDAQQSNSK 705
>gi|424864444|ref|ZP_18288347.1| enoyl-CoA hydratase/3,2-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA
dehydrogenase [SAR86 cluster bacterium SAR86B]
gi|400759190|gb|EJP73372.1| enoyl-CoA hydratase/3,2-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA
dehydrogenase [SAR86 cluster bacterium SAR86B]
Length = 715
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 246/709 (34%), Positives = 388/709 (54%), Gaps = 34/709 (4%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ- 71
D VA++T+ NPPVN L+ + GL + E+A + D V +V+TGNG F G DI+ F
Sbjct: 11 DNVAVLTVDNPPVNPLSEGVRNGLYEGMEKALTDDSVIGVVITGNGRAFIAGADISEFGG 70
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K G S+ V N IE KP+VAA+ GLALGGGLE A+ C+ RIA+P +
Sbjct: 71 KPEGH---------SLNDVFNKIETSVKPVVAAMNGLALGGGLETALVCNYRIASPSAFV 121
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
GLPE+ LG++PG TQRLPRLVG ++A++MM+ I + + KLG++D +
Sbjct: 122 GLPEVNLGLLPGAGGTQRLPRLVGPAEAMKMMITGSHIPANKALKLGVVDDLSDDVVKSS 181
Query: 189 VSRLWALDIAARRKPWIRSLHRT--DKLGSLSEAREVLKLA-RLQAKKTAPNMPQHQACL 245
+ + ++ + P IR++ + + G+ E+ + A +++ + AP +
Sbjct: 182 IEFIQSVK-NVQNHPQIRNIDKNIIEFRGNDDVFNEMKQFAAKIRKGQFAPGQ-----II 235
Query: 246 DVIEEGIVHGGY-SGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRG 304
+E + + +G+ KE ++F E +M ++H+FF +RA +K+ +V K
Sbjct: 236 KCVESAVNETDFDNGLKKEGELFLECLMHPQREAMIHIFFGERAAAKIDDVPRETQKQE- 294
Query: 305 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 364
++K AVIG G MG GIA I V + + + + L +GI I N +V RG+L +
Sbjct: 295 IKKAAVIGSGTMGGGIAMCFANAGIPVHILDQDEDNLKRGIGVINKNYEMMVERGRLKPE 354
Query: 365 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 424
++ L+Y + DVD+V+EAV E++ LK+KIF +L++ P ILATNTS +D
Sbjct: 355 AKEFVTGLITSSLNYDDIHDVDIVVEAVYENIDLKKKIFEQLDEVTKPETILATNTSGLD 414
Query: 425 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 484
++ + T ++++G HFFSPA++M LLE+VR +S + + +M +GK +KK VV
Sbjct: 415 VDGIASVTKRPEKVVGTHFFSPANIMRLLEVVRGNESSNETLATIMDLGKKLKKASVVSL 474
Query: 485 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATS 544
N GF NR F YS A +L+ G ID A+ +FG+ +GPF++ DL G +
Sbjct: 475 NAPGFIGNRMLFGYSNQANMLLLEGALPHEIDGALEAFGMNMGPFRMFDLVGLDLGWRAR 534
Query: 545 KEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRL 603
K P Q+ + D L R G+ NGKG Y Y +GS+ P P P + +
Sbjct: 535 KLGKLETP---LQAKISDALCDQDRFGQKNGKGFYNYVEGSRAPHPAPENEELYIKVSEE 591
Query: 604 SNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGG 663
+NI + ++E EIVE + +VNE R+L EG+ RA+D+D + G FP +RGG
Sbjct: 592 NNI----ERRQISEDEIVERCMLGLVNEGTRILSEGVAQRAADIDIVYINGYGFPIWRGG 647
Query: 664 IVFWADAVGANYVYTSLKKW-SQLYGNFFKPSRFLEERATKGIPL-SAP 710
+ +A+++G + + L + + + F+ S FL A G L +AP
Sbjct: 648 PMHYANSMGLDKIVDRLDYYFEKTQSDVFRASEFLRNLANNGQKLGNAP 696
>gi|359795628|ref|ZP_09298244.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Achromobacter
arsenitoxydans SY8]
gi|359366313|gb|EHK67994.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Achromobacter
arsenitoxydans SY8]
Length = 733
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 234/696 (33%), Positives = 368/696 (52%), Gaps = 26/696 (3%)
Query: 17 IITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGA 76
++ + +PPVNAL+ + L + EA + V+AI+L G G F G DI F K
Sbjct: 47 VVVIDHPPVNALSAAVRRDLSNAIAEAQTDTRVRAILLMGAGKNFIAGADIREFGKPP-- 104
Query: 77 GDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPEL 136
L+PD+ N IE KP++AA+ G ALGGGLE+AM H R+A +LGLPE+
Sbjct: 105 -QQPLLPDL-----CNQIEASAKPVIAALHGAALGGGLEIAMAAHYRVALAGAKLGLPEV 158
Query: 137 TLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLW 193
LG++PG TQR PRL+G A+++ML K ++++ GL+DA+ + E+ L +
Sbjct: 159 NLGLLPGAGGTQRAPRLMGAQAALDLMLTGKHLSADAALAAGLVDALASEEDPLDAGLAY 218
Query: 194 ALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIV 253
+ A R+ D L + A + TA + + + I
Sbjct: 219 TRQLLALNAGPRRTRDAADALSDRQAQLAAVDAAAERIATTARGLFSPARIVQAVRAAIE 278
Query: 254 HGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGG 313
G+ E +F + + LVH FFA+R T+K+P + + + R + +V ++GG
Sbjct: 279 QPFDEGLRTERALFLQCLDSPQRAALVHAFFAERETAKIPELKEA--RARRLERVGIVGG 336
Query: 314 GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKML 373
G MG+GIA A + + VV+ E + L +G +E LV +G+++ D+ L
Sbjct: 337 GTMGAGIAVAVLDAGLPVVMVEQDDAALARGRARVEQVYDLLVKKGRISSDERAARLARF 396
Query: 374 KGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTS 433
G +Y + D++IEAV E + +KQ +F++L++ P +LATNTS +D+N + E T
Sbjct: 397 TGATNYDALGEADLIIEAVFEDMAVKQAVFAQLDRVAKPGAVLATNTSYLDVNQIAEATR 456
Query: 434 SQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNR 493
++G HFFSPA++M LLE+V T+ + + + ++K PV G C GF NR
Sbjct: 457 GPADVLGLHFFSPANIMKLLEVVVGRHTAPDTVATGFELARRLRKTPVRAGVCDGFIGNR 516
Query: 494 AFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKE----FDK 549
+ Q+A +++ G + ID+A+R+FG P+GP+Q+ DLAG + AT K D
Sbjct: 517 ILAVHRQAADMMMEDGASPYDIDAAVRAFGYPMGPYQMADLAGGDIGWATRKRRAATRDP 576
Query: 550 AFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKP-KPDPSVLPIIEECRRLSNIMP 608
A R Q P D L + G G+ G+G Y Y G++ PDP VL II++ RR + + P
Sbjct: 577 AL--RYVQIP--DRLCERGWFGQKTGRGFYLYPDGARQGTPDPDVLAIIDDERRRAGVAP 632
Query: 609 GGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWA 668
+P T+ +I+ L +VNE+ VL +GI +R SD+D + G FP YRGG + +A
Sbjct: 633 --RPF--TQDDILSRYLAAMVNEAANVLHQGIALRPSDIDVVFLSGYGFPRYRGGPMHYA 688
Query: 669 DAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
D+V + ++ ++ F+KPS L A G
Sbjct: 689 DSVDLPRILADIRGFAAEDPAFWKPSPLLVALAESG 724
>gi|115525778|ref|YP_782689.1| 3-hydroxyacyl-CoA dehydrogenase [Rhodopseudomonas palustris BisA53]
gi|115519725|gb|ABJ07709.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Rhodopseudomonas palustris BisA53]
Length = 694
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 244/698 (34%), Positives = 382/698 (54%), Gaps = 32/698 (4%)
Query: 14 GVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKV 73
GVAI+T+ +PPVNAL+ + G+ + A + V AIVLT G F G DI F K
Sbjct: 12 GVAIVTIDSPPVNALSAAVRRGIHQQVSAAVADPAVHAIVLTCGGRTFIAGADITEFGK- 70
Query: 74 HGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGL 133
P S+ V++ +E+ KP++AA+ G ALGGGLE+A+GCH R+A + +LGL
Sbjct: 71 ------PPQPP-SLHEVISTLENSPKPVIAAIHGTALGGGLEVALGCHFRVAVKEAKLGL 123
Query: 134 PELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVS 190
PE+ LG++PG TQRLPR VG A++M++ + I + E + GLI+ +V E
Sbjct: 124 PEVKLGLLPGAGGTQRLPRAVGPELAVKMIVSGEPIGASEALQHGLIEEIV--EGPAAGG 181
Query: 191 RLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 250
+A + A ++P + KL + R + A K A + AC D I
Sbjct: 182 EAFARKVLAEKRPLRKLRDDDAKLAAAKADRSIFTNAVAAMTKKARGLEAPFACADAIAA 241
Query: 251 GIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV--PNVTDIGLKPRGVRKV 308
I G+ KE + F +LV+ D S+ + FFA+R +KV P T +PR V KV
Sbjct: 242 AIDLPFDEGLKKEREGFMKLVVSDQSKAQRYAFFAEREAAKVEVPEAT----RPRPVNKV 297
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
A+IG G MG GIA + I V L E E L +G+ ++ N RG + D
Sbjct: 298 AIIGAGTMGGGIAMSFANAGIPVTLIETGEEQLKRGLGIMQKNYEATAARGGIPADAPAK 357
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
+ ++ GV+ KD D++IEAV E++ +K+++F+ L+ P +LA+NTS ++++ +
Sbjct: 358 RMGLITGVVGLEHVKDADLIIEAVFETMAVKKEVFTALDAYAKPGAVLASNTSYLNIDEI 417
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
T ++G HFFSPA+VM L EIVR +T+ +L +++ + I KVP VVG C G
Sbjct: 418 AATTKRPQDVLGMHFFSPANVMKLCEIVRAAKTAPDALLTAVSIARKIAKVPAVVGVCDG 477
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR ++ A L+ G ++D+ + FG+P+GPF + DLAG + + +
Sbjct: 478 FVGNRMLAQRAKQAEKLLFEGALPQQVDAVVTKFGMPMGPFAMGDLAGLDIGWRSRQ--- 534
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIM 607
DR +S + D L ++GR G+ GKG Y YE GS+ P PDP V +I++ + ++
Sbjct: 535 ----DRGIKSEIADALCEAGRFGQKTGKGYYKYEAGSRAPLPDPEVETLIDQTLQKLDL- 589
Query: 608 PGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFW 667
K ++ ++EI+E +++P++NE R+LEE I R SD+D + G +P YRGG + +
Sbjct: 590 ---KRRAIDDQEILERMMYPMINEGARILEEKIAARPSDIDVIWLYGYGWPIYRGGPMHY 646
Query: 668 ADAVGANYVYTSLKKWSQLYGN-FFKPSRFLEERATKG 704
AD+VG + L +++ + +P+ L A +G
Sbjct: 647 ADSVGLKQIAERLSHYAKATNDPSLEPAPLLARLAAEG 684
>gi|221199900|ref|ZP_03572943.1| peroxisomal bifunctional enzyme (pbe) (pbfe) [Burkholderia
multivorans CGD2M]
gi|221207431|ref|ZP_03580440.1| 3-hydroxyacyl-CoA dehydrogenase, C- domain family [Burkholderia
multivorans CGD2]
gi|221172634|gb|EEE05072.1| 3-hydroxyacyl-CoA dehydrogenase, C- domain family [Burkholderia
multivorans CGD2]
gi|221180139|gb|EEE12543.1| peroxisomal bifunctional enzyme (pbe) (pbfe) [Burkholderia
multivorans CGD2M]
Length = 710
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 243/699 (34%), Positives = 371/699 (53%), Gaps = 23/699 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D V ++T+ +PPVNAL+ + GL D + A + D ++A+++ G G F G DI F
Sbjct: 19 RDKVLVVTIDHPPVNALSADVRRGLADALDAAQADDAIRAVLIVGAGRNFIAGADIREFG 78
Query: 72 KVHGAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKT 129
K P V L V IE KP+V A+ G LGGGLE+A+ H R+A P
Sbjct: 79 K----------PPVPPSLPDVCARIESSAKPVVVALHGATLGGGLEVALAAHYRLAVPGA 128
Query: 130 QLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL 186
+LGLPE+TLG++PG TQR PRL+G A+++ML + ++E+ LGL+D + S++
Sbjct: 129 KLGLPEVTLGLLPGAGGTQRTPRLIGAKAALDLMLTGRHASAEDALALGLVDRLAHSDDT 188
Query: 187 LKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLD 246
L +A ++ + P R+ L + A+ + AR + K + + +D
Sbjct: 189 LAEGLAYAQELVSLGAPARRT-RDAQALADRAAAQAAIDAARAELPKKSRGLFSPAKIVD 247
Query: 247 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 306
+E + +G+ E +F + + GLVH FFA+R +KVP +P +
Sbjct: 248 AVEAALAQPFDAGMKLERSLFLQCIDSPQRAGLVHAFFAEREAAKVPEARRGTARP--IE 305
Query: 307 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 366
++ V+GGG MG+GIA A + + V + E + L +G +E LV +G++T
Sbjct: 306 RIGVVGGGTMGAGIAIAALDAGLPVTMIERDEAALARGRAHVEKVYDALVAKGRMTPAAQ 365
Query: 367 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 426
+ + LKG Y VD+VIEAV E + +KQ +F+EL + C P +LATNTS +D++
Sbjct: 366 SARIARLKGSTSYDALAQVDVVIEAVFEDMAVKQAVFAELARVCKPGAVLATNTSYLDID 425
Query: 427 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 486
+ +IG HFFSPA+VM LLEIV R SA V+ + +++KK+PV G C
Sbjct: 426 ALAASIDRPADVIGLHFFSPANVMKLLEIVVPARASADVVATAFALARLLKKMPVRAGVC 485
Query: 487 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKE 546
GF NR Y +A L+ G ++ID A+R FG P+GPFQ++DLAG + AT K
Sbjct: 486 DGFIGNRILAVYRTAADYLMEDGASPYQIDRAVREFGFPMGPFQVVDLAGGDIGWATRKR 545
Query: 547 FDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSN 605
R+ + D L + G G+ G+G Y Y G++ PDP V I+E+ R
Sbjct: 546 RAATRDPRARYVEISDRLCERGWFGQKTGRGYYLYPDGARVGTPDPEVEAIVEQERAKKG 605
Query: 606 IMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIV 665
I+P + T+ EI+ L ++NE V+ E I +R D+D + G FP YRGG +
Sbjct: 606 IVPR----AFTDDEILRRYLAAMINEGANVVHEKIALRPLDVDAVFLHGYGFPRYRGGPM 661
Query: 666 FWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+AD VG V ++ +++ F+KPS L E +G
Sbjct: 662 HYADTVGLANVLADIRAFAEEDPLFWKPSPLLVELVERG 700
>gi|170694988|ref|ZP_02886137.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia graminis
C4D1M]
gi|170140086|gb|EDT08265.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia graminis
C4D1M]
Length = 697
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 239/704 (33%), Positives = 376/704 (53%), Gaps = 33/704 (4%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
+G+A++T NPPVN+L+ L+D+ A +RDDV AI+LTG F GG +I F
Sbjct: 11 EGIAVVTFQNPPVNSLSALQRRSLQDQLRHAAARDDVSAIILTGGARPFCGGAEIREFNT 70
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDC---KKPIVAAVEGLALGGGLELAMGCHARIAAPKT 129
+S + LIE C KP++AA+ G A G GLELAM H RIA
Sbjct: 71 A---------AQLSSPTMPELIEGCDTLSKPLIAAIGGFAFGAGLELAMAMHYRIAGADA 121
Query: 130 QLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL 186
+LGLPE+T G +PG TQRLPRLV + A MML + + + GL+D + + +L
Sbjct: 122 KLGLPEVTFGFLPGAGGTQRLPRLVPMEHAARMMLSGSPVDAATAHRQGLVDRL-SDGDL 180
Query: 187 LKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLD 246
+ +A + A P L RT +L + +L+ + H+ L
Sbjct: 181 FDDALSFARQLVAEGAP----LRRTSQLRVRMDTAPADLFDQLRDDINKRYL-SHKGKLH 235
Query: 247 VIEEGIVHGGYS---GVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPR 303
+++ + S G E F EL+ S+ L + FFA+R +K+ +V+ ++PR
Sbjct: 236 IVDCCVAATKLSFEEGRQFERARFLELLETPESKALRYNFFAERNAAKIADVS-ADVRPR 294
Query: 304 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQ 363
+R A++G G MG+GIA I V L + ++E L +G+ I V +G+++
Sbjct: 295 NIRTAAIVGAGTMGAGIAVCFANAGIRVALIDASTEGLERGMSIIRGVFDADVVKGRISA 354
Query: 364 DKANNALKMLKGVLDY-SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 422
D+ + L + + S DVD+V+EA E + +KQ+IF EL++ PPH ILATNTS
Sbjct: 355 DERDRRLAFVAPTVSLPSAVSDVDLVVEAAFEQLDIKQQIFRELDRLAPPHAILATNTSM 414
Query: 423 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 482
+D++ + TS ++G HFFSPAHVM LLE+VR TS +V++ +M + + ++K V+
Sbjct: 415 LDIDAIAAVTSRPQDVVGMHFFSPAHVMRLLEVVRCRMTSDEVLITVMQIARKLRKTAVM 474
Query: 483 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAA 542
C GF NR Y Q A L+ G V +IDSA+ FG+ +GPF + DL+G + +
Sbjct: 475 SRVCDGFIGNRMLQRYLQQALFLLDEGCTVEQIDSAMERFGMAMGPFAVGDLSGLDIGWS 534
Query: 543 TSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVLPIIEECR 601
K PD + S + D + ++ R G+ +GKG Y YE+ S+ + DP I+ R
Sbjct: 535 IRKRRYVERPDMMY-SRVADRICEARRLGQKSGKGWYRYEQNSRKRISDPEAAAIVSAYR 593
Query: 602 RLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYR 661
+ + +V E EIV+ ++ ++NE +L+EG+ RASD+D G FP R
Sbjct: 594 QEIGV----PSRAVGEHEIVDRLMLALINEGALILQEGVAQRASDIDVVYATGYGFPVTR 649
Query: 662 GGIVFWADAVGANYVYTSLKKWSQLY-GNFFKPSRFLEERATKG 704
GG +++A+ +G + V T ++++ Y G ++P+ L + A +G
Sbjct: 650 GGPMYYANTLGLDTVLTRIRQFQSGYQGGQWQPAELLVKLAQRG 693
>gi|327309822|ref|YP_004336720.1| 3-hydroxybutyryl-CoA epimerase [Pseudonocardia dioxanivorans
CB1190]
gi|326955157|gb|AEA28853.1| 3-hydroxybutyryl-CoA epimerase [Pseudonocardia dioxanivorans
CB1190]
Length = 703
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 241/695 (34%), Positives = 368/695 (52%), Gaps = 23/695 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA+I L NPPVN L + GL A + D V+A+ L G G F GG D+ F
Sbjct: 22 VAVIRLTNPPVNGLGDTLRTGLAAGIAAAATDDAVRAVTLVGEGKGFCGGADLRQF---- 77
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G + P VS V+ I D KP+VAA+ G ALGGG ELA+ C RIA +GLP
Sbjct: 78 GTPAATAQPTVSE--VLQQIRDLAKPVVAAIHGFALGGGYELALVCSHRIAHRDATIGLP 135
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 191
E+ +G++PG TQRLPRL+G A+E++ ++ + +LG+IDA V +++L +
Sbjct: 136 EVDVGLLPGAGGTQRLPRLIGTDAALELIQNGTTVPAPRAAELGMIDACV-DDDVLDAAL 194
Query: 192 LWALDIA-ARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 250
+ D A +P R D L + AR + + + N A +D +E
Sbjct: 195 AYLDDTGVAGAQP------RLDDLPPPAAGDADFAAARRRVRPSTRNGVAQLAAIDCVEA 248
Query: 251 GIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAV 310
G+ E F L+ ++ L H FFA++ +KV ++ D ++PR V ++AV
Sbjct: 249 ATQLPIEEGLPLERASFLRLLESTEAKALRHTFFAEKQAAKVLDI-DRSVQPRPVERIAV 307
Query: 311 IGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNAL 370
IG G MG+GIA A + + V L E + L +GI+ ++ N + +L + L
Sbjct: 308 IGAGTMGTGIAMAFANSGLAVDLIEQDRAALERGIELVQRNYEATAAKRRLDAVQVEQRL 367
Query: 371 KMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGE 430
++ LD D+V+EAV E + +K+ +F++L+ P +LA+NTS +D++ +
Sbjct: 368 ALITPSLDLDVVAQADLVVEAVFEDMAVKKDVFAKLDAIAKPGAVLASNTSRLDIDELAR 427
Query: 431 KTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFA 490
S +IG HFFSPAHVM LLE+VR E T+ VI M V ++I KVPV+ C GF
Sbjct: 428 SVSRPRDVIGLHFFSPAHVMKLLEVVRGESTADDVIATSMAVARLINKVPVLSKVCEGFI 487
Query: 491 VNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKA 550
NR PY + A L+ G+ R+D A+ +FGL +GPF++ DLAG + A K
Sbjct: 488 GNRMLTPYRREADFLLEEGMTPERVDRALETFGLAMGPFRMSDLAGLDIGWAARKRLAPT 547
Query: 551 FPDRSFQSPLVDLLLKSGRNGKANGKGLYTY-EKGSKPKPDPSVLPIIEECRRLSNIMPG 609
S + D+L ++GR G+ G G Y Y E KP DP V II +C +
Sbjct: 548 RDTSLRYSRVADVLCEAGRFGQKTGAGYYRYAEDSRKPVADPVVEQIIRQCAEEDGV--- 604
Query: 610 GKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWAD 669
+ +T+ EIV+ + +VNE R+L +G+ RASD+D + G FP+YRGG +++A+
Sbjct: 605 -ERREITDAEIVDRCMLALVNEGARILGDGVAQRASDIDVVYIDGYGFPAYRGGPMYYAE 663
Query: 670 AVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+G V ++ + +G ++ P+ LE+R +G
Sbjct: 664 TLGLAEVLRRIQTFEAAHGAYWAPAPLLEQRVAEG 698
>gi|421471274|ref|ZP_15919575.1| enoyl-CoA hydratase/isomerase family protein [Burkholderia
multivorans ATCC BAA-247]
gi|400225835|gb|EJO55970.1| enoyl-CoA hydratase/isomerase family protein [Burkholderia
multivorans ATCC BAA-247]
Length = 710
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 244/699 (34%), Positives = 369/699 (52%), Gaps = 23/699 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D V ++T+ +PPVNAL+ + GL D + A + D ++A+++ G G F G DI F
Sbjct: 19 RDKVLVVTIDHPPVNALSADVRRGLADALDAAQADDAIRAVLIVGAGRNFIAGADIREFG 78
Query: 72 KVHGAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKT 129
K P V L V IE KP+V A+ G LGGGLE+A+ H R+A P
Sbjct: 79 K----------PPVPPSLPDVCARIESSAKPVVVALHGATLGGGLEVALAAHYRLAVPGA 128
Query: 130 QLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL 186
+LGLPE+TLG++PG TQR PRL+G A+++ML + ++EE LGL+D + S++
Sbjct: 129 KLGLPEVTLGLLPGAGGTQRTPRLIGAKAALDLMLTGRHASAEEALALGLVDRLAHSDDT 188
Query: 187 LKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLD 246
L +A ++ + P R+ L + A+ + AR + K + + +D
Sbjct: 189 LAEGLAYAQELVSLGAPARRT-RDAQALADRAAAQAAIDAARAELPKKSRGLFSPAKIVD 247
Query: 247 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 306
+E + +G+ E +F + + GLVH FFA+R +KVP +P +
Sbjct: 248 AVEAALAQPFDAGMKLERSLFLQCIDSPQRAGLVHAFFAEREAAKVPEARRGTARP--IE 305
Query: 307 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 366
++ V+GGG MG+GIA A + + V + E + L +G +E LV +G++T
Sbjct: 306 RIGVVGGGTMGAGIAIAALDAGLPVTMIERDEAALARGRAHVEKVYDALVAKGRMTPAAQ 365
Query: 367 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 426
+ LKG Y VD+VIEAV E + +KQ +F+EL + C P +LATNTS +D++
Sbjct: 366 AARIARLKGSTSYDALAQVDVVIEAVFEDMAVKQAVFAELARVCKPGAVLATNTSYLDID 425
Query: 427 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 486
+ +IG HFFSPA+VM LLEIV R SA V+ + + +KK+PV G C
Sbjct: 426 ALAASIDRPADVIGLHFFSPANVMKLLEIVVPARASADVVATAFALARQLKKMPVRAGVC 485
Query: 487 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKE 546
GF NR Y +A L+ G ++ID A+R FG P+GPFQ++DLAG + AT K
Sbjct: 486 DGFIGNRILAVYRTAADYLMEDGASPYQIDRAVREFGFPMGPFQVVDLAGGDIGWATRKR 545
Query: 547 FDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSN 605
R+ + D L + G G+ G+G Y Y G++ PDP V I+E+ R
Sbjct: 546 RAATRDPRARYVEISDRLCERGWFGQKTGRGYYLYPDGARVGTPDPEVEAIVEQERAKKG 605
Query: 606 IMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIV 665
I+P + T+ EI+ L ++NE V+ E I +R D+D + G FP YRGG +
Sbjct: 606 IVPR----AFTDDEILRRYLAAMINEGANVVHEKIALRPLDVDAVFLHGYGFPRYRGGPM 661
Query: 666 FWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+AD VG V ++ +++ F+KPS L E +G
Sbjct: 662 HYADTVGLANVLADIRAFAEEDPLFWKPSPLLVELVERG 700
>gi|161523604|ref|YP_001578616.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia multivorans ATCC
17616]
gi|189351627|ref|YP_001947255.1| 3-hydroxybutyryl-CoA epimerase [Burkholderia multivorans ATCC
17616]
gi|160341033|gb|ABX14119.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia
multivorans ATCC 17616]
gi|189335649|dbj|BAG44719.1| 3-hydroxybutyryl-CoA epimerase [Burkholderia multivorans ATCC
17616]
Length = 710
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 244/699 (34%), Positives = 369/699 (52%), Gaps = 23/699 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D V ++T+ +PPVNAL+ + GL D + A + D ++A+++ G G F G DI F
Sbjct: 19 RDKVLVVTIDHPPVNALSADVRRGLADALDAAQADDAIRAVLIVGAGRNFIAGADIREFG 78
Query: 72 KVHGAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKT 129
K P V L V IE KP+V A+ G LGGGLE+A+ H R+A P
Sbjct: 79 K----------PPVPPSLPDVCARIESSAKPVVVALHGATLGGGLEVALAAHYRLAVPGA 128
Query: 130 QLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL 186
+LGLPE+TLG++PG TQR PRL+G A+++ML + ++EE LGL+D + S++
Sbjct: 129 KLGLPEVTLGLLPGAGGTQRAPRLIGAKAALDLMLTGRHASAEEALALGLVDRLAHSDDT 188
Query: 187 LKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLD 246
L +A ++ + P R+ L + A+ + AR + K + + +D
Sbjct: 189 LAEGLAYAQELVSLGAPARRT-RDAQALADRAAAQAAIDAARAELPKKSRGLFSPAKIVD 247
Query: 247 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 306
+E + +G+ E +F + + GLVH FFA+R +KVP +P +
Sbjct: 248 AVEAALTQPFDAGMKLERSLFLQCIDSPQRAGLVHAFFAEREAAKVPEARRGTARP--IE 305
Query: 307 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 366
++ V+GGG MG+GIA A + + V + E + L +G +E LV +G++T
Sbjct: 306 RIGVVGGGTMGAGIAIAALDAGLPVTMIERDEAALARGRAHVEKVYDALVAKGRMTPAAQ 365
Query: 367 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 426
+ LKG Y VD+VIEAV E + +KQ +F+EL + C P +LATNTS +D++
Sbjct: 366 AARIARLKGSTSYDALAQVDVVIEAVFEDMAVKQAVFAELARVCKPGAVLATNTSYLDID 425
Query: 427 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 486
+ +IG HFFSPA+VM LLEIV R SA V+ + + +KK+PV G C
Sbjct: 426 ALAASIDRPADVIGLHFFSPANVMKLLEIVVPARASADVVATAFALARQLKKMPVRAGVC 485
Query: 487 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKE 546
GF NR Y +A L+ G ++ID A+R FG P+GPFQ++DLAG + AT K
Sbjct: 486 DGFIGNRILAVYRTAADYLMEDGASPYQIDRAVREFGFPMGPFQVVDLAGGDIGWATRKR 545
Query: 547 FDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSN 605
R+ + D L + G G+ G+G Y Y G++ PDP V I+E+ R
Sbjct: 546 RAATRDPRARYVEISDRLCERGWFGQKTGRGYYLYPDGARVGTPDPEVEAIVEQERAKKG 605
Query: 606 IMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIV 665
I+P + T+ EI+ L ++NE V+ E I +R D+D + G FP YRGG +
Sbjct: 606 IVPR----AFTDDEILRRYLAAMINEGANVVHEKIALRPLDVDAVFLHGYGFPRYRGGPM 661
Query: 666 FWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+AD VG V ++ +++ F+KPS L E +G
Sbjct: 662 HYADTVGLANVLADIRAFAEEDPLFWKPSPLLVELVERG 700
>gi|171322824|ref|ZP_02911545.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia ambifaria
MEX-5]
gi|171091819|gb|EDT37322.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia ambifaria
MEX-5]
Length = 615
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 228/620 (36%), Positives = 346/620 (55%), Gaps = 15/620 (2%)
Query: 90 VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQR 146
++ +E KP+VAA+ + +GGGLELA+G H R+AAP Q+ LPE+ LG++PG TQR
Sbjct: 1 MIRAVEASAKPVVAALHSVVMGGGLELALGAHYRVAAPGAQVALPEVKLGLLPGAGGTQR 60
Query: 147 LPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIR 206
LPR VGL A+ M++ + SE+ GL DA+ + LL + +A + A++ P R
Sbjct: 61 LPRAVGLETALNMIVSGAPVPSEQLANSGLFDAMADGD-LLDAAVAFARKVGAQKGPHPR 119
Query: 207 SLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKV 266
D+ A ++ AR A+ APN P C+D IE G+++G G + E +
Sbjct: 120 V---RDRKIVHENAAGFIQFARNSARAAAPNFPAPHKCIDAIEAGVLNGFDKGSVAEREG 176
Query: 267 FKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHI 325
F L+M SR L H FF +RA SK+ +V D + R +R+V VIG G MG GIA +
Sbjct: 177 FVALMMTPESRALRHAFFGERAASKIADVPADTPV--REIRRVGVIGAGTMGGGIAMNFV 234
Query: 326 LNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 385
+ V L E + L +G+ TI N V +GKLTQ K + + ++ L Y + KD
Sbjct: 235 NAGLPVTLLETKQDALERGLATIRKNYDAQVKKGKLTQQKLDARMALITPTLSYDDLKDA 294
Query: 386 DMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFS 445
D+++EAV E + +K+++F L+ P ILA+NTST+D++ + T ++G HFFS
Sbjct: 295 DLIVEAVFEELGVKEQVFGRLDAVAKPGAILASNTSTLDVDKIAAFTKRPQDVVGMHFFS 354
Query: 446 PAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLL 505
PA+VM LLE+VR T+ V+ +M V K I+K VV G C GF NR Y + A +
Sbjct: 355 PANVMKLLEVVRGAHTAKDVLATVMAVAKKIRKTAVVSGVCDGFIGNRMIEQYIRQALFM 414
Query: 506 VSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLL 565
+ G ++D AI FG +GPF++ DLAG + A K PD + S + D L
Sbjct: 415 LEEGALPAQVDRAIEKFGFAMGPFRMSDLAGNDIGWAIRKRRYVEKPDLQY-SKIADRLC 473
Query: 566 KSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMIL 625
+ GR G+ G G Y Y G + K PS L ++E + G + + + EIVE ++
Sbjct: 474 EQGRFGQKTGGGWYDYVPGDR-KAKPSAL--VDEMVVAYSKERGIERRKIGDDEIVERLV 530
Query: 626 FPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQ 685
F +VNE ++LEE I +ASD+D + G FP +RGG + +AD VG V ++++++
Sbjct: 531 FALVNEGAKILEEKIASKASDIDMVYLTGYGFPLWRGGPMLYADMVGLYNVERAIRRYAA 590
Query: 686 L-YGNFFKPSRFLEERATKG 704
G+ ++ + + ERA+ G
Sbjct: 591 APNGDAWQLAPSIAERASAG 610
>gi|302341530|ref|YP_003806059.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Desulfarculus
baarsii DSM 2075]
gi|301638143|gb|ADK83465.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Desulfarculus
baarsii DSM 2075]
Length = 709
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 246/698 (35%), Positives = 372/698 (53%), Gaps = 14/698 (2%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ T+ NPPVN L+ + L FEEA D V AIVLTG G F G DI QK
Sbjct: 14 DGVAVFTMNNPPVNQLSDYFIKDLVAAFEEAWKDDQVYAIVLTGEGKNFVAGADITQLQK 73
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ D + + N IE KP++AA+ G LGGGLELAM CH R+A LG
Sbjct: 74 MKNR-DEAFGLVMEGHKFYNAIELSPKPVIAAINGNCLGGGLELAMCCHYRVAVKGVSLG 132
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 189
LPE++LG++PG TQRLPR++GL A +MM K I +E + GL+D V ++LLK
Sbjct: 133 LPEVSLGLLPGGGGTQRLPRIIGLPNAAQMMTTGKPIKAEVAFVRGLVDEVCAPDKLLKK 192
Query: 190 SRLWALDIAAR-RKPWIRSLHRT-DKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDV 247
+ A AR +R+ T +L S +E + R + LD
Sbjct: 193 AFGAAKMFKARMYNQKVRTARNTFYRLPSFNEKLHFMNYIRAMVGAQSKGYIAPGKILDC 252
Query: 248 IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRK 307
+++G+ + + EA F +LV ++ L+ +F R+ ++P + D LKP K
Sbjct: 253 LDKGLSADFEADLKVEANGFADLVTSAVAKNLIGMFLNTRSAGRLPRIKD--LKPAKPMK 310
Query: 308 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 367
VA +GGG+MG GI + N VL ++N L KG+++++ ++ + K+ +
Sbjct: 311 VAQLGGGVMGCGIVHLLLANGFECVLWDINDAALAKGVESVKKTFAFMIKKKKMKPADLD 370
Query: 368 NAL-KMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 426
L + L + DVD+VIEAV+E++ +KQ+I+ LEK C P I TNTS + +
Sbjct: 371 KLLAEKLTTTTKLEDLGDVDLVIEAVLENMKVKQEIWLTLEKTCRPDVIFGTNTSALPIT 430
Query: 427 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 486
+ R+IG HFF+PA M LLEI+ ++TS Q + + G+ IKKVP+VV +
Sbjct: 431 EMASVLKDPGRMIGLHFFNPAERMQLLEIICAQQTSDQTLATSVDFGRRIKKVPIVVNDG 490
Query: 487 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKE 546
GF V+R + LV+ GV I+ A+ +FG+P+GP L DL G + ++
Sbjct: 491 PGFYVSRQLGGLMGGSVFLVADGVSGEAIEKAMMNFGMPMGPATLADLTGIDINYHVNQT 550
Query: 547 FDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNI 606
F + DR PL + + G G+ G+G Y G KP P+P + ++ + + +N+
Sbjct: 551 FARELGDRYTVHPLTEAIYNLGDYGRKTGRGYMDYTSG-KPVPNPRLQQVVADYLKANNV 609
Query: 607 MPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVF 666
P P E+EI++ +L +NE+ ++E+GI R +D+D A + G FP YRGGI+
Sbjct: 610 APKDMP----EQEIIDAMLGLAINEAALMIEQGICDRPADMDLAMIYGTGFPPYRGGILR 665
Query: 667 WADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+AD G VY +L K YG F P++ +++ A KG
Sbjct: 666 YADTWGLKNVYETLVKLEGRYGKRFAPAKLIKDMAEKG 703
>gi|260431228|ref|ZP_05785199.1| peroxisomal bifunctional enzyme [Silicibacter lacuscaerulensis
ITI-1157]
gi|260415056|gb|EEX08315.1| peroxisomal bifunctional enzyme [Silicibacter lacuscaerulensis
ITI-1157]
Length = 698
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 246/698 (35%), Positives = 368/698 (52%), Gaps = 31/698 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A++ NPPVNAL + + GL E A S + KA+++ G G + G DI F K
Sbjct: 13 IAVLAANNPPVNALGVDVRRGLLAGIERAES-EGAKAVLIYGKGRTYFAGADIREFGK-- 69
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
+P + + IE +V+A+ G ALGGGLE+A+ H RIA P ++GLP
Sbjct: 70 -PPQEPWLPGL-----CDRIEASPLLVVSALHGTALGGGLEVALSSHYRIAVPSAKVGLP 123
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE--ELLKV 189
E+ LG++PG TQRLPR+ G+ A++M+ + + ++E KLG+ID V + E+
Sbjct: 124 EVNLGILPGAGGTQRLPRVAGVEAALDMITTGRHVRADEALKLGVIDKVQDGDPREIGLA 183
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
LD A R+ + + D + + VLK R Q AC
Sbjct: 184 YAQELLDTGAPRRA-VGEMPAPDPVDFDAVYEAVLKKGRGQLSPAVAVRAVQAACE---- 238
Query: 250 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 309
G+ +E ++F +L+ D +GL+H FFA+RA K+P + G++PR V ++
Sbjct: 239 ---APSFAEGMARERELFMQLMESDQRKGLIHAFFAERAVGKLPELK--GVEPRPVHQIG 293
Query: 310 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 369
VIGGG MG+GIATA +L + V L E+ E I N+ G + RGK++Q + +
Sbjct: 294 VIGGGTMGAGIATAALLAGLPVTLLEMTQEAAHAAKDRIAGNLAGALKRGKISQQQHDAI 353
Query: 370 LK-MLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
L L+ Y VD+VIEAV E + +K+++F++L+ C P +LATNTS +D+N +
Sbjct: 354 LSDQLQLATGYDALSAVDLVIEAVFEDMDVKKQVFAQLDAVCKPGAVLATNTSYLDVNEI 413
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
T+ +IG HFFSPAHVM LLEIV ++T+ +V+ +G +KKV V G C G
Sbjct: 414 AAATTRPQDVIGLHFFSPAHVMKLLEIVVADKTAPEVVATGFALGHRLKKVSVRAGVCDG 473
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSK-EF 547
F NR Y A +V G F+ID A+ FG +GPF + DLAG + A K +
Sbjct: 474 FIGNRILSTYRTCADHMVLDGASPFQIDKALTDFGFAMGPFAVSDLAGLDIGWAVRKRKR 533
Query: 548 DKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNI 606
+ R+ S D L ++G G+ G+G Y YEKG + P+ VL +I R I
Sbjct: 534 AEGLDPRARDSSYADKLCEAGHFGQKTGQGSYVYEKGKRGGTPNSEVLDLIAADRAAQGI 593
Query: 607 MPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVF 666
P + T+ EIV + +VNE+ +V+ EGI R D+D + G FP YRGG +
Sbjct: 594 T----PRTFTDDEIVRRYMVSMVNEAAKVVGEGIARRPLDVDVVLLYGYGFPRYRGGPLK 649
Query: 667 WADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
WAD G + ++ WS F++P+ LE+ +G
Sbjct: 650 WADLQGLPGILDDIRAWSAEDDYFWQPAPLLEKLVAEG 687
>gi|119713641|gb|ABL97692.1| fatty oxidation complex alpha subunit [uncultured marine bacterium
EB0_39H12]
Length = 690
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 240/690 (34%), Positives = 367/690 (53%), Gaps = 27/690 (3%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
D VA+I L +PPVNAL+ + GL + A VK+IV+ G F G DI F
Sbjct: 14 DEVAVIMLNSPPVNALSANVREGLNNGVSAAIEDSSVKSIVIICEGRTFIAGADITEF-- 71
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
G P S+ V ++IE+ KP+VAA+ G ALGGGLE+A+ CH RIA P + G
Sbjct: 72 ----GQAPKGP--SLYEVQDMIENSPKPVVAAIHGTALGGGLEVALTCHYRIAVPSAKCG 125
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 189
LPE+ LG++PG TQRLPR+VG SKA+ MM + + + + +GL+D + L
Sbjct: 126 LPEVNLGLLPGAGGTQRLPRIVGASKALVMMTSGEHVPANQCHDMGLVDEMADEANLEGD 185
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
+ +A I + KP ++ +K+ S + R + + + IE
Sbjct: 186 AIQFANRIVSEGKPLVKVRDADEKIKSDKGNDALFADFRKSILRKTRGFLAPEYNIQCIE 245
Query: 250 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT-DIGLKPRGVRKV 308
+ G+ E +F +L+ S ++FFAQR +K+P++ + LK G V
Sbjct: 246 AAVNLPFEEGMKVEQDLFMKLMTGSQSAAQRYMFFAQRQVTKIPDIEKETPLKEIG--SV 303
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
+IG G MG GI+ I V + E + E L KGI I N +G++T ++
Sbjct: 304 GIIGAGTMGGGISMNFANVGIPVTIIEQSQERLDKGISIIRKNYENTAAKGRITSEQVEE 363
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
+ ++ G D++IEAV E++ LK+ IF +L+ C ILA+NTS +D+N +
Sbjct: 364 RMSLINGQTSIEALNTQDLIIEAVFENMDLKKDIFKQLDNICKEGAILASNTSALDVNEI 423
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
+ T+ + +IG HFFSPA+VM LLEIVR ++TS V+ + V K I+K+ VVG C G
Sbjct: 424 ADVTNRPEDVIGLHFFSPANVMKLLEIVRGDKTSKSVVASSLAVAKRIQKIAAVVGVCPG 483
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR + A L+ G + ID A+ FG P+GPF + DLAG + ++
Sbjct: 484 FVGNRILAQRQREANKLILEGALPWDIDDALFDFGFPMGPFAMSDLAGLDIG------WN 537
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMP 608
K + S L D+L ++GR G+ +GKG Y Y++ PDP V +I++ I
Sbjct: 538 K---ETSNGETLRDVLCEAGRLGQKSGKGFYVYDENRNKSPDPEVEALIKKFGEERQI-- 592
Query: 609 GGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWA 668
+ ++++EI+E L+P++NE ++LEEG+ +RASD+D G +P Y GG +F+
Sbjct: 593 --QMRDISKEEILERCLYPMINEGFKILEEGMAIRASDIDIVWTNGYGWPVYEGGPMFYG 650
Query: 669 DAVGANYVYTSLKKWSQLYGNFFKPSRFLE 698
+ VG + V L+ + G FKPS +LE
Sbjct: 651 NLVGYDKVLAWLQNAEKELGPEFKPSAYLE 680
>gi|326925661|ref|XP_003209029.1| PREDICTED: peroxisomal bifunctional enzyme-like [Meleagris
gallopavo]
Length = 726
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 262/713 (36%), Positives = 383/713 (53%), Gaps = 54/713 (7%)
Query: 24 PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMP 83
PV LA+ + L+D + A + VKA+ + G G+FS G DI F + G + L P
Sbjct: 22 PVVCLAV--LQALEDGLKRADADPSVKAVTICGENGKFSAGADIRGFSSPNKQG-LGLGP 78
Query: 84 DVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG 143
+V+LIE +KP+VAA+EG+ALGGGLE+ +GCH RIA + ++GLPE+T+G++PG
Sbjct: 79 ------IVSLIERSEKPVVAAIEGIALGGGLEVTLGCHYRIAHVQARMGLPEVTIGLLPG 132
Query: 144 ---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVV---TSEELLKVS-RLWALD 196
TQRLPRL+G+ A++++ + I++ E KLGL+D VV T E ++++ RL
Sbjct: 133 AEGTQRLPRLIGVPAALDIITTGRHISASEALKLGLVDEVVEENTVEAAIRLANRLIGQP 192
Query: 197 IAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGG 256
+ RR SL KL ++ L A ++ KK A + C I+
Sbjct: 193 LGHRR----LSLKPVPKLPNMEA---FLTEALVKVKKRAQGCLAPELCFQAIKAATEQPF 245
Query: 257 YSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK---PRGVRKVAVIGG 313
GV KE ++F L+ ++ L + FFA+RA K + K P+ +RK AVIG
Sbjct: 246 ADGVRKERELFNILLTSGQAKALQYAFFAERAVEKWTTPSGASWKTASPQPIRKAAVIGL 305
Query: 314 GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKM- 372
G MG GI T+ + I VV E + EYL G K + L+ R + ++ L
Sbjct: 306 GTMGRGIVTSLVKAKIPVVALEQDLEYLNTGRKAVML----LLEREAMKMEQGGQTLDFN 361
Query: 373 ----LKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
L+ +D+ +DVD+VIEAV E++ LK++IF++L + C P L TNTS ++++ +
Sbjct: 362 NPARLQFAVDFDVLRDVDLVIEAVFENMALKKEIFNKLSRICKPEAFLCTNTSALNIDEI 421
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
TS ++IG HFFSPAHVM LLEI+ TS I M + K++KKV VVVGNC G
Sbjct: 422 ASVTSRPQQVIGTHFFSPAHVMRLLEIIYGRHTSPTTIATAMQLAKVMKKVGVVVGNCFG 481
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR FPY Q A L+ G +D + FG IGPF++ DLAG V + K+
Sbjct: 482 FVGNRMMFPYVQQAVFLLEEGSRPEDVDQVLEDFGFKIGPFRMSDLAGLDVGWRSRKDQG 541
Query: 549 KAFPDRS-----------FQSPLVDLLLKSGRNGKANGKGLYTYEK--GSKPKPDPSVLP 595
P + SPL DLL + GR G+ GKG Y YEK G KPDP +
Sbjct: 542 LTGPTLAPGTSARQRHGYRYSPLPDLLCEKGRFGQKTGKGWYQYEKAGGRTAKPDPWIHS 601
Query: 596 IIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGM 655
+ E R I K + ++EI+E LF ++NE +L EGI LD + G
Sbjct: 602 FLSEYRDTHQI----KTRFIDQEEILERCLFTLINEGFDILAEGIASGPEHLDVVYINGY 657
Query: 656 SFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF--FKPSRFLEERATKGIP 706
+P +RGG +F+A VG + L+K+S+++ + +PS FL++ G P
Sbjct: 658 GWPKHRGGPMFYASTVGLPNILAKLQKYSEIHPDVPQLRPSAFLKKLVAMGNP 710
>gi|170734224|ref|YP_001766171.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia cenocepacia MC0-3]
gi|169817466|gb|ACA92049.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia
cenocepacia MC0-3]
Length = 708
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 243/699 (34%), Positives = 362/699 (51%), Gaps = 23/699 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D V ++T+ +PPVNAL+ + GL D + A + D ++A+++ G G F G DI F
Sbjct: 17 RDKVLVVTIDHPPVNALSADVRRGLADALDAAQADDAIRAVLIVGAGRNFIAGADIREFG 76
Query: 72 KVHGAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKT 129
K P V L V IE KP+V A+ G LGGGLE+A+ H R+A P
Sbjct: 77 K----------PPVPPSLPDVCERIESGTKPVVVALHGATLGGGLEVALAAHYRLAVPGA 126
Query: 130 QLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL 186
+LGLPE+TLG++PG TQR PRL+G A+++ML + ++EE LGL+D + S++
Sbjct: 127 KLGLPEVTLGLLPGAGGTQRAPRLIGAKAALDLMLTGRHASAEEALALGLVDRIAHSDDT 186
Query: 187 LKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLD 246
L +A ++ + P +R L + A+ + AR + K + + +D
Sbjct: 187 LAEGLAYAQELVSLGAP-VRRTRDAQGLADRAAAQAAIDAARAELPKKSRGLFSPAKIVD 245
Query: 247 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 306
+E + +G+ E +F + + GLVH FFA+R +K P PR V
Sbjct: 246 AVEAALTQSFDAGMKLERNLFLQCLDSPQRAGLVHAFFAEREAAKAPEARRA--SPRPVE 303
Query: 307 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 366
++ V+GGG MG+GIA A + + V + E + L +G +E GLV +G++T
Sbjct: 304 RIGVVGGGTMGAGIAVAALDAGLPVTMIERDEASLARGRAHVEKVYDGLVAKGRMTPAAH 363
Query: 367 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 426
L KG Y D+VIEAV E + +KQ +F+EL + C P +LATNTS +D++
Sbjct: 364 AARLARFKGSTSYDALAQADVVIEAVFEDMAVKQAVFAELARVCKPGAVLATNTSYLDID 423
Query: 427 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 486
+ +IG HFFSPA+VM LLEIV R S V+ + K +KK PV G C
Sbjct: 424 ALAASIDRPADVIGLHFFSPANVMKLLEIVVPARVSPDVVATAFALAKQLKKTPVRAGVC 483
Query: 487 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKE 546
GF NR Y +A L+ G ++ID A+R FG P+GPFQ++DLAG + AT K
Sbjct: 484 DGFIGNRILAVYRTAADYLMEDGASPYQIDRAVRGFGFPMGPFQVVDLAGGDIGWATRKR 543
Query: 547 FDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSN 605
+ + D L + G G+ G+G Y Y G++ PDP V I+ E R
Sbjct: 544 RAATRDPNARYVEISDRLCERGWFGQKTGRGYYLYPDGARVGTPDPEVGAIVAEERAKKG 603
Query: 606 IMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIV 665
I P + T+ EI+ L ++NE V+ E I +R D+D + G FP YRGG +
Sbjct: 604 IT----PRTFTDDEILRRYLAAMINEGANVVHEKIALRPLDVDAVFLYGYGFPRYRGGPM 659
Query: 666 FWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+AD VG V ++ +++ F+KPS L + +G
Sbjct: 660 HYADTVGLANVLADIRAFAKEDPLFWKPSPLLVDLVARG 698
>gi|221211110|ref|ZP_03584089.1| peroxisomal bifunctional enzyme (pbe) (pbfe) [Burkholderia
multivorans CGD1]
gi|221168471|gb|EEE00939.1| peroxisomal bifunctional enzyme (pbe) (pbfe) [Burkholderia
multivorans CGD1]
Length = 710
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 244/699 (34%), Positives = 368/699 (52%), Gaps = 23/699 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D V ++T+ +PPVNAL+ + GL D + A + D ++A+++ G G F G DI F
Sbjct: 19 RDKVLVVTIDHPPVNALSADVRRGLADALDAAQADDAIRAVLIVGAGRNFIAGADIREFG 78
Query: 72 KVHGAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKT 129
K P V L V IE KP+V A+ G LGGGLE+A+ H R+A P
Sbjct: 79 K----------PPVPPSLPDVCARIESSAKPVVVALHGATLGGGLEVALAAHYRLAVPGA 128
Query: 130 QLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL 186
+LGLPE+TLG++PG TQR PRL+G A+++ML + ++EE LGL+D + S++
Sbjct: 129 KLGLPEVTLGLLPGAGGTQRAPRLIGAKAALDLMLTGRHASAEEALALGLVDRLAHSDDT 188
Query: 187 LKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLD 246
L +A ++ + P R+ L + A+ + AR + K + + +D
Sbjct: 189 LAEGLAYAQELVSLGAPARRT-RDAQALADRAAAQAAIDAARAELPKKSRGLFSPAKIVD 247
Query: 247 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 306
+E + +G+ E +F + + GLVH FFA+R +KVP +P +
Sbjct: 248 AVEAALAQPFDAGMKLERSLFLQCIDSPQRAGLVHAFFAEREAAKVPEARRGTARP--IE 305
Query: 307 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 366
++ V+GGG MG+GIA A + + V + E + L +G +E LV +G++T
Sbjct: 306 RIGVVGGGTMGAGIAIAALDAGLPVTMIERDEAALARGRAHVEKVYDALVAKGRMTSAAQ 365
Query: 367 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 426
+ LKG Y VD+VIEAV E + +KQ +F+EL + C P +LATNTS +D++
Sbjct: 366 AARIARLKGSTSYDALAQVDVVIEAVFEDMAVKQAVFAELARVCKPGAVLATNTSYLDID 425
Query: 427 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 486
+ +IG HFFSPA+VM LLEIV R SA V+ + + +KK+PV G C
Sbjct: 426 ALAASIDRPADVIGLHFFSPANVMKLLEIVVPARASADVVATAFALARQLKKMPVRAGVC 485
Query: 487 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKE 546
GF NR Y +A L+ G ++ID A+R FG P+GPFQ++DLAG + AT K
Sbjct: 486 DGFIGNRILAVYRTAADYLMEDGASPYQIDRAVREFGFPMGPFQVVDLAGGDIGWATRKR 545
Query: 547 FDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSN 605
R+ + D L + G G+ G+G Y Y G++ PDP V I+E+ R
Sbjct: 546 RAATRDPRARYVEISDRLCERGWFGQKTGRGYYLYPDGARVGTPDPEVEAIVEQERAKKG 605
Query: 606 IMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIV 665
I+P + T+ EI+ L ++NE V+ E I +R D+D + G FP YRGG +
Sbjct: 606 IVPR----AFTDDEILRRYLAAMINEGANVVHEKIALRPLDVDAVFLHGYGFPRYRGGPM 661
Query: 666 FWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
AD VG V ++ +++ F+KPS L E +G
Sbjct: 662 HHADTVGLANVLADIRAFAEEDPLFWKPSPLLVELVERG 700
>gi|311107837|ref|YP_003980690.1| fatty acid oxidation complex subunit alpha [Achromobacter
xylosoxidans A8]
gi|310762526|gb|ADP17975.1| fatty acid oxidation complex subunit alpha 1 [Achromobacter
xylosoxidans A8]
Length = 700
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 255/694 (36%), Positives = 368/694 (53%), Gaps = 25/694 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA+I L NPPVN L + +G+ A + + V +IV+ G G F GG DI F
Sbjct: 24 VAVIFLDNPPVNGLGDTVRSGIHAGLALALADEGVDSIVIAGAGKAFCGGADIRQF-NTP 82
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
A ++ DV + IE KP+VAA+ G ALGGGLELA+GCH R+A +++GLP
Sbjct: 83 AATAKPMLRDV-----IAAIEASAKPVVAAIHGFALGGGLELALGCHYRVAQADSKMGLP 137
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 191
E+ LG++PG TQRLPRL+G+S+A++M+ K + + +GL+DAV + LL +
Sbjct: 138 EVNLGLVPGGGGTQRLPRLIGVSRALDMIQSGKPMDATAAMAVGLVDAVAEGD-LLDFAL 196
Query: 192 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 251
+A + AA+ + + D G A AR A N +A +D +E
Sbjct: 197 SYARERAAQDSHPLAARRALDAGGVDFAA------ARAGVNPKARNAIAQRAVIDCLEAA 250
Query: 252 IVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVI 311
G+ +E ++F LV D S+ L H+FFA+R + P VT G R + +V ++
Sbjct: 251 TRQPIEPGLDEERRLFDALVEGDASKALRHLFFAER---EAPRVTGGGSAGR-IGRVGIL 306
Query: 312 GGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALK 371
G G MG GIA A+ V L E L +G+ I N +GKL +
Sbjct: 307 GAGTMGGGIAMAYANAGYDVTLYEREQAALDRGMSLIRKNYEITAAKGKLDAAGVEARMA 366
Query: 372 MLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEK 431
+ LD + D+VIEAV E + +KQ +F +L+ C P ILATNTS ++++ +
Sbjct: 367 RIAPSLDMQDLAQADLVIEAVFEDMAVKQAVFRQLDAVCKPGAILATNTSRLNIDEIATC 426
Query: 432 TSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAV 491
T+ + +IG HFFSPA+VM LLE+VR RT A VI M V + I K+PV+VG C GF
Sbjct: 427 TARPEAVIGLHFFSPANVMKLLEVVRGARTGADVIATCMAVAQQIGKIPVLVGVCEGFVG 486
Query: 492 NRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAF 551
NR Y + A L+ G +ID A+ FG+ +GP + DLAG + AT K
Sbjct: 487 NRMLTGYWREAGFLLEEGASPQQIDGALTRFGMAMGPLAMADLAGMDINWATRKRLAPTR 546
Query: 552 PDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGG 610
P S + D + + GR G+ G Y YE GS+ P PDP V IIE C R + I
Sbjct: 547 PAHLRYSKVADRICELGRFGQKTQAGYYRYEPGSRQPLPDPVVDGIIETCAREAGIAR-- 604
Query: 611 KPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADA 670
+P+S ++EIVE + + NE R++EEGI RASD+D V G FP RGG +F+A
Sbjct: 605 RPVS--DEEIVERCMLALANEGARIIEEGIAQRASDVDVVYVHGYGFPGARGGPMFYAQT 662
Query: 671 VGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+G +++ + +G + P+ LE +G
Sbjct: 663 LGLAETLEKIRELQRAHGEHWTPAPLLERLVKEG 696
>gi|430808528|ref|ZP_19435643.1| 3-hydroxyacyl-CoA dehydrogenase [Cupriavidus sp. HMR-1]
gi|429499103|gb|EKZ97555.1| 3-hydroxyacyl-CoA dehydrogenase [Cupriavidus sp. HMR-1]
Length = 696
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 253/675 (37%), Positives = 368/675 (54%), Gaps = 22/675 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA++++ PVN L + + D + A + V+AIVLTG FS G DI F
Sbjct: 13 VAVLSMNKGPVNGLGAALRTAIADAMDRANADPAVQAIVLTGTPRAFSAGADITEF---- 68
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G + S P++ V V++ IE KP+VAA+ G LGGGLELA+GCH R+A P QLGLP
Sbjct: 69 GTPNASREPNLRV--VIDQIEGGAKPVVAAIAGQCLGGGLELALGCHFRVALPDAQLGLP 126
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 191
E+ +G++PG TQR+PRL+GL +A+ M+ L ++ LID V + +
Sbjct: 127 EVKIGLLPGGGGTQRMPRLIGLEQAVNMVTLGNPAPAKSFAGTPLIDRVADGDVVAAAVA 186
Query: 192 LWALDIAARRKPWIRSLHRTDKLG-SLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 250
IAA+ P RT L S + L+ AR + A L+ +
Sbjct: 187 FAQELIAAKTPP-----RRTRALSVSHPQGESFLQFARNSVAQQAKGQIAPMKALEAVAA 241
Query: 251 GIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAV 310
+ G+ E + F L+ SR L H+F A+ A SK+ ++ G R +RKV V
Sbjct: 242 SLTKSFDEGMRVEREGFMSLMASPESRALRHIFKAEHAASKIADLP-AGTPLREIRKVGV 300
Query: 311 IGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNAL 370
IG G MG GI + I VVL E+ E L KG+ TI N + +GKL ++ +
Sbjct: 301 IGAGTMGGGITMNFLNAGIPVVLLEMKQEALDKGLATIRRNYENSMKKGKLKPEQLEQRM 360
Query: 371 KMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGE 430
++ G L Y++ DVD+VIEAV E++ +K+ +F L+K C ILA+NTS ++L+ +
Sbjct: 361 ALITGTLSYADLSDVDLVIEAVFENMDVKKTVFETLDKTCKAGAILASNTSYLNLDRIAS 420
Query: 431 KTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFA 490
T +IG HFFSPA+VM LLEIVR +T+ V+ M + K IKK+ VV G C GF
Sbjct: 421 FTKRPTDVIGLHFFSPANVMRLLEIVRGAQTAPDVLATCMALAKKIKKIAVVSGVCDGFI 480
Query: 491 VNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKA 550
NR Y +A L++ G +ID A++ FG+ +GP+++ DLAG + AT K A
Sbjct: 481 GNRMLARYGAAAGALINAGALPQQIDGALQKFGMAMGPYRMGDLAGLDIGYATRKR-KAA 539
Query: 551 FPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPG 609
+ + D L ++GR G+ G G Y YE G++ P PDP+ +I E R I
Sbjct: 540 EAGVPLRPSVADKLAEAGRLGQKTGAGWYRYEAGNRDPIPDPATETLIAEFRSAQGI--- 596
Query: 610 GKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWAD 669
P +++++E+VE +F +VNE R+LEEGI RASDLD + G FP RGG + +AD
Sbjct: 597 -TPRAISDEEVVERCIFALVNEGARILEEGIAARASDLDVVYLNGYGFPRLRGGPMLYAD 655
Query: 670 AVGANYVYTSLKKWS 684
VG V SL++++
Sbjct: 656 MVGLPNVVRSLRRFA 670
>gi|423018204|ref|ZP_17008925.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding [Achromobacter
xylosoxidans AXX-A]
gi|338778707|gb|EGP43176.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding [Achromobacter
xylosoxidans AXX-A]
Length = 706
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 241/698 (34%), Positives = 373/698 (53%), Gaps = 27/698 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
V ++T+ +PPVNAL+ + AGL ++A + V+A++LTG G F G DI F K
Sbjct: 18 VLVVTIDHPPVNALSAEVRAGLLQAIDQAQADPQVRAVLLTGAGNNFIAGADIREFGKPP 77
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
+PDV N IE KP+VAA+ G ALGGGLE+A+ H R+A P +LGLP
Sbjct: 78 ---RPPALPDV-----CNRIEASAKPVVAALHGAALGGGLEVALAAHYRVALPGAKLGLP 129
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 191
E+TLG++PG TQR PRL+G + A+++ML K +T++ GL D + T + L
Sbjct: 130 EVTLGLLPGAGGTQRAPRLIGAAAALDLMLSGKPMTAQAAVAAGLADELATGADPLAAGL 189
Query: 192 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 251
+ + AR RS + + + A T + L+ +
Sbjct: 190 DYTRRLLARNAAPRRSRDGQALADKAAALAAIDAAGQRIAASTR-GLFSPAKILEAVRAA 248
Query: 252 IVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVI 311
+ G+ E +F + + GL+H FFA+R T+K+P + +PR + +V VI
Sbjct: 249 VELPFDEGLRTERALFLQCLDSPQRAGLIHAFFAERETAKIPELKQA--RPRRLERVGVI 306
Query: 312 GGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALK 371
GGG MG+GIA A + + VV+ E + L +G + +E L +G+++ D+ L
Sbjct: 307 GGGTMGAGIAVALLDAGLPVVMVEQDDAALARGRQRVEHVYDLLAGKGRMSADERAARLA 366
Query: 372 MLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEK 431
L G DY+ D D+VIEAV E + +KQ +F++L++ P +LATNTS +D++ + +
Sbjct: 367 RLTGATDYAALADADLVIEAVFEDMDVKQAVFAQLDRVVRPDAVLATNTSYLDVDRIAQA 426
Query: 432 TSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAV 491
T R++G HFFSPA++M LLE+V T+A + + + ++K+ V G C GF
Sbjct: 427 TRDPGRVLGLHFFSPANIMKLLEVVVGRDTAADTVATGFELARRLRKIAVRAGVCDGFIG 486
Query: 492 NRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKE----F 547
NR + Q+A +++ G + ID+A+R FG P+GP+Q++DLAG + AT K
Sbjct: 487 NRILAVHRQAADMMMEDGASPYDIDTAVRDFGYPMGPYQMVDLAGGDIGWATRKRRAATR 546
Query: 548 DKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKP-KPDPSVLPIIEECRRLSNI 606
D A R Q P D L + G G+ G+G Y Y G++ PDP VL II R+ + +
Sbjct: 547 DPAL--RYVQIP--DRLCERGWFGQKTGRGFYLYPDGARHGTPDPQVLAIIAAERQRAGV 602
Query: 607 MPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVF 666
P + ++I L ++NE+ VL E I +R SD+D + G FP +RGG +
Sbjct: 603 ----TPRAFGAEDIQRRYLAAMINEAANVLREDIALRPSDIDMVFLSGYGFPRHRGGPMH 658
Query: 667 WADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+AD VG V ++ +++ F+KPS L E A G
Sbjct: 659 YADRVGLANVLADIRAYAKEDPAFWKPSPLLVELAESG 696
>gi|409404906|ref|ZP_11253379.1| 3-hydroxyacyl-CoA dehydrogenase [Herbaspirillum sp. GW103]
gi|386435673|gb|EIJ48497.1| 3-hydroxyacyl-CoA dehydrogenase [Herbaspirillum sp. GW103]
Length = 713
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 241/707 (34%), Positives = 367/707 (51%), Gaps = 42/707 (5%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+ ++T+ N PVNAL + + GL EE + V AI++TG G F GG DI F K
Sbjct: 22 ILVVTIDNAPVNALGVAVRRGLLAAIEEGEADAGVAAILVTGAGRNFIGGADIREFGKPP 81
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
A L+ ++ N IE C KP++AA+ G ALGGGLE+A+ H R+A +LGLP
Sbjct: 82 QA---PLLTEL-----CNRIEACSKPVLAAIHGAALGGGLEVALAAHYRLALANARLGLP 133
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 191
E+ LG++PG TQR PRL+G A+E ML + + ++E LGL+D + E
Sbjct: 134 EVQLGLLPGAGGTQRTPRLIGAQAALETMLSGRHLGAKEALGLGLVDHLAEGE------- 186
Query: 192 LWALDIAARRKPWIRSLHRTDKLGS-LSEARE------------VLKLARLQAKKTAPNM 238
D A R +R L +G+ + +R+ + AR + K + +
Sbjct: 187 ----DAAQARAAGLRELQTLLDMGAPVRRSRDGSALADSAAAQAAISAARAETGKKSRGL 242
Query: 239 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDI 298
+D +E G+ E + F + + GL+H FFA+R K P +
Sbjct: 243 FSPHKIIDAVEAATTLPFDQGLALERQFFLQCLDSPQRAGLIHAFFAEREVQKAPETRNA 302
Query: 299 GLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTR 358
+PR + ++ V+GGG MG+GIA A + + V + E + E L +G +E V +
Sbjct: 303 --QPRPIARIGVVGGGTMGAGIAVAVLDAGLPVTMIERDDEALARGRGHVEKVYDAQVAK 360
Query: 359 GKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 418
G+LTQ+ + L L G Y + D+VIEAV E + +KQ +F+EL++ C P +LAT
Sbjct: 361 GRLTQEARDAVLARLHGSTRYEDLSAADVVIEAVFEDLNVKQAVFAELDRVCKPGAVLAT 420
Query: 419 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKK 478
NTS +D++ + S +IG HFFSPA+VM LLEIV + +A V+ + K ++K
Sbjct: 421 NTSYLDIDAIAASISRPADVIGLHFFSPANVMKLLEIVVPRQVAADVVATAFELAKRLRK 480
Query: 479 VPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYG 538
VPV G C GF NR Y Q+A L+ G + ID+A+R FG +GP+Q++DLAG
Sbjct: 481 VPVRAGVCDGFIGNRILAVYRQAADALMEDGASPYEIDAAVRDFGFAMGPYQVVDLAGGD 540
Query: 539 VAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKP-KPDPSVLPII 597
+ AT K R+ + D L + G G+ +G+G Y Y G + PDP VL +I
Sbjct: 541 IGWATRKRRAATRDPRARYVHIADRLCERGWFGQKSGRGFYRYPDGPRSGAPDPEVLALI 600
Query: 598 EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSF 657
+E R + I P S ++++I L ++NE V+ + I +R D+D + G F
Sbjct: 601 DEERARAGIT----PRSFSKEDIQRRYLAAMINEGANVVHQRIALRPLDVDVTFLYGYGF 656
Query: 658 PSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
P +RGG + +AD VG V ++ ++ F+ PS L E +G
Sbjct: 657 PRHRGGPMKYADMVGLPNVLADIRTFAAEDPLFWTPSPLLVELVERG 703
>gi|254247097|ref|ZP_04940418.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia cenocepacia PC184]
gi|124871873|gb|EAY63589.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia cenocepacia PC184]
Length = 720
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 242/699 (34%), Positives = 363/699 (51%), Gaps = 23/699 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D V ++T+ +PPVNAL+ + GL D + A + D ++A+++ G G F G DI F
Sbjct: 29 RDKVLVVTIDHPPVNALSADVRRGLADAIDAAQADDAIRAVLIVGAGRNFIAGADIREFG 88
Query: 72 KVHGAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKT 129
K P V L V IE KP+V A+ G LGGGLE+A+ H R+A P
Sbjct: 89 K----------PPVPPSLPDVCEQIESGTKPVVVALHGATLGGGLEVALAAHYRLAVPGA 138
Query: 130 QLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL 186
+LGLPE+TLG++PG TQR PRL+G A+++ML + +++E LGL+D + S++
Sbjct: 139 KLGLPEVTLGLLPGAGGTQRAPRLIGAKAALDLMLTGRHASADEALALGLVDRIAHSDDT 198
Query: 187 LKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLD 246
L +A ++ + P +R L + A+ + AR + K + + +D
Sbjct: 199 LAEGLAYAQELVSLGAP-VRRTRDAQGLADRAAAQAAIDAARAELPKKSRGLFSPAKIVD 257
Query: 247 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 306
+E + +G+ E +F + + GLVH FFA+R +K P PR V
Sbjct: 258 AVEAALTQSFDAGMKFERSLFLQCLDSPQRAGLVHAFFAEREAAKAPEARRA--SPRPVE 315
Query: 307 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 366
++ V+GGG MG+GIA A + + V + E + L +G +E GLV +G++T
Sbjct: 316 RIGVVGGGTMGAGIAVAALDAGLPVTMIERDEASLARGRAHVEKVYDGLVAKGRMTPAAH 375
Query: 367 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 426
L KG Y D+VIEAV E + +KQ +F+EL + C P +LATNTS +D++
Sbjct: 376 AARLARFKGSTSYDALAQADVVIEAVFEDMAVKQAVFAELARVCKPGAVLATNTSYLDID 435
Query: 427 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 486
+ +IG HFFSPA+VM LLEIV R SA V+ + K +KK PV G C
Sbjct: 436 ALAASIDRPADVIGLHFFSPANVMKLLEIVVPARVSADVVATAFALAKQLKKTPVRAGVC 495
Query: 487 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKE 546
GF NR Y +A L+ G ++ID A+R FG P+GPFQ++DLAG + AT K
Sbjct: 496 DGFIGNRVLAVYRTAADYLMEDGASPYQIDRAVRGFGFPMGPFQVVDLAGGDIGWATRKR 555
Query: 547 FDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSN 605
+ + D L + G G+ G+G Y Y G++ PDP V I+ E R
Sbjct: 556 RAATRDPNARYVEISDRLCERGWFGQKTGRGYYLYPDGARVGTPDPEVEAIVAEERAKKG 615
Query: 606 IMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIV 665
+ P + T+ EI+ L ++NE V+ E I +R D+D + G FP YRGG +
Sbjct: 616 VT----PRTFTDDEILRRYLAAMINEGANVVHEKIALRPLDVDAVFLYGYGFPRYRGGPM 671
Query: 666 FWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+AD VG V ++ +++ F+KPS L + +G
Sbjct: 672 HYADTVGLANVLADIRAFAKEDPLFWKPSPLLVDLVARG 710
>gi|121611857|ref|YP_999664.1| 3-hydroxyacyl-CoA dehydrogenase [Verminephrobacter eiseniae EF01-2]
gi|121556497|gb|ABM60646.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Verminephrobacter eiseniae EF01-2]
Length = 703
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 239/702 (34%), Positives = 367/702 (52%), Gaps = 31/702 (4%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGV +I L +PPVNAL+ + G+ +A + AIVL +G F G DI F K
Sbjct: 14 DGVGVIVLNSPPVNALSAAVRDGIHAGVRQAIADAHASAIVLRCDGNTFIAGADIREFGK 73
Query: 73 VHGAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQ 130
P V L V +E+ KP+VAA+ G ALGGGLE+A+ CH RIA P +
Sbjct: 74 ----------PPAGVGLGEVQRALEESPKPVVAAMHGTALGGGLEVALVCHWRIAVPSAK 123
Query: 131 LGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELL 187
LGLPE+ +G++PG TQRLPR+VG A+E+M + + + +GLID + ++L
Sbjct: 124 LGLPEVGIGLLPGAGGTQRLPRIVGPEVALELMTSGAQVEAADALGIGLIDELAPEDDLQ 183
Query: 188 KVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDV 247
+ A + A ++P + + DK+ + E++ R K + +
Sbjct: 184 GAAVALAKRVVAEKRPLRKLRDQNDKVEAARGNPELVAAFRKANAKKFRGFAAPEKIVQC 243
Query: 248 IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT-DIGLKPRGVR 306
+E + G+ E K+F EL+ + S H FFA R KVP + D + P V+
Sbjct: 244 VEAAVNLPFDEGLKLERKLFVELMQGEQSAAQRHYFFASRQAWKVPGLKKDAAIVP--VQ 301
Query: 307 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 366
V VIG G MG+GIA + I V + E E L +G+ TI N +G+L
Sbjct: 302 TVGVIGAGTMGAGIAMNFLNVGIPVHIVETRQEALDRGLATIRTNYGNTAKKGRLEVGAI 361
Query: 367 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 426
+ ++ G L+ + ++VIEAV E + +K+ +F L++ ILA+NTS +DLN
Sbjct: 362 EERMALVTGSLELQDLSGCELVIEAVFEDMEVKKHLFGRLDRVAKAGAILASNTSALDLN 421
Query: 427 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 486
+ T+ + +IG HFFSPA+VM LLEIVR ++TS VI M + + I KV V+VG C
Sbjct: 422 QIASATARPESVIGLHFFSPANVMKLLEIVRGDQTSDSVIATSMQLARKIGKVAVLVGVC 481
Query: 487 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKE 546
GF NR + A L+ G + +D + FG P+GPF + DLAG +
Sbjct: 482 PGFVGNRILGQRQREANQLIFEGATPWAVDRVLYDFGFPMGPFAMSDLAGLDLG------ 535
Query: 547 FDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNI 606
++K D+S + L ++L + GR G+ G G Y Y+ +P V +I + R I
Sbjct: 536 WNK---DKSTGATLREVLCEMGRRGQKTGAGFYDYDGQRTAQPSQLVEGVIRDFARKKGI 592
Query: 607 MPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVF 666
P V++ EI+E ++P++NE ++L+EG+ VRASD+D + G +P YRGG +
Sbjct: 593 ----APRQVSDDEILERCIYPMINEGAKILQEGVAVRASDIDVVWINGYGWPVYRGGPMH 648
Query: 667 WADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLS 708
+ + +G V + ++++ +G FKP++ LEE G S
Sbjct: 649 YGERIGLPKVLSRMREFEARHGPQFKPAKLLEELVASGRKFS 690
>gi|107023812|ref|YP_622139.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia cenocepacia AU 1054]
gi|105894001|gb|ABF77166.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia cenocepacia AU 1054]
Length = 708
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 244/699 (34%), Positives = 364/699 (52%), Gaps = 23/699 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D V ++T+ +PPVNAL+ + GL D + A + D ++A+++ G G F G DI F
Sbjct: 17 RDKVLVVTIDHPPVNALSADVRRGLADAIDAAQADDAIRAVLIVGAGRNFIAGADIREFG 76
Query: 72 KVHGAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKT 129
K P V L V IE KP+V A+ G LGGGLE+A+ H R+A P
Sbjct: 77 K----------PPVPPSLPDVCERIESGTKPVVVALHGATLGGGLEVALAAHYRLAVPGA 126
Query: 130 QLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL 186
+LGLPE+TLG++PG TQR PRL+G A+++ML + ++EE LGL+D + S++
Sbjct: 127 KLGLPEVTLGLLPGAGGTQRAPRLIGAKAALDLMLTGRHASAEEALALGLVDRIAHSDDT 186
Query: 187 LKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLD 246
L +A ++ + P +R L + A+ + AR + K + + +D
Sbjct: 187 LAEGLAYAQELVSLGAP-VRRTRDAQGLADRAAAQAAIDAARAELPKKSRGLFSPAKIVD 245
Query: 247 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 306
+E + +G+ E +F + + GLVH FFA+R +K P PR V
Sbjct: 246 AVEAALTQSFDAGMKLERSLFLQCLDSPQRAGLVHAFFAEREAAKAPEARRA--NPRPVE 303
Query: 307 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 366
++ V+GGG MG+GIA A + + V + E + L +G +E GLV +G++T
Sbjct: 304 RIGVVGGGTMGAGIAVAALDAGLPVTMIERDEASLARGRAHVEKVYDGLVAKGRMTPAAH 363
Query: 367 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 426
L LKG Y D+VIEAV E + +KQ +F+EL + C P +LATNTS +D++
Sbjct: 364 AARLARLKGSTSYDALAQADVVIEAVFEDMAVKQAVFAELARVCKPGAVLATNTSYLDID 423
Query: 427 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 486
++ +IG HFFSPA+VM LLEIV R S V+ + K +KK PV G C
Sbjct: 424 VLAASIDRPADVIGLHFFSPANVMKLLEIVVPARVSPDVVATAFALAKQLKKTPVRAGVC 483
Query: 487 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKE 546
GF NR Y +A L+ G ++ID A+R FG P+GPFQ++DLAG + AT K
Sbjct: 484 DGFIGNRVLAVYRTAADYLMEDGASPYQIDRAVRGFGFPMGPFQVVDLAGGDIGWATRKR 543
Query: 547 FDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSN 605
+ + D L + G G+ G+G Y Y G++ PDP V I+ E R
Sbjct: 544 RAATRDPNARYVEISDRLCERGWFGQKTGRGYYLYPDGARVGTPDPEVEAIVAEERAKKG 603
Query: 606 IMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIV 665
I P + T+ EI+ L ++NE V+ E I +R D+D + G FP YRGG +
Sbjct: 604 IT----PRTFTDDEILRRYLAAMINEGANVVHEKIALRPLDVDAVFLYGYGFPRYRGGPM 659
Query: 666 FWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+AD VG V ++ +++ F+KPS L + +G
Sbjct: 660 HYADTVGLANVLADIRAFAKEDPLFWKPSPLLVDLVARG 698
>gi|254251314|ref|ZP_04944632.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia dolosa AUO158]
gi|124893923|gb|EAY67803.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia dolosa AUO158]
Length = 710
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 248/705 (35%), Positives = 368/705 (52%), Gaps = 24/705 (3%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
VT E D V ++T+ +PPVNAL+ + GL D + A + D ++A+++ G G F G
Sbjct: 14 VTRERRGD-VLVVTIDHPPVNALSADVRRGLADALDAAQADDAIRAVLVVGAGRNFIAGA 72
Query: 66 DINVFQKVHGAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
DI F K P V L V IE KP+V A+ G LGGGLE+A+ H R
Sbjct: 73 DIREFGK----------PPVPPSLPDVCERIESSAKPVVVALHGATLGGGLEVALAAHYR 122
Query: 124 IAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAV 180
+A P +LGLPE+TLG++PG TQR PRL+G A+++ML + +++E LGL+D +
Sbjct: 123 LALPGAKLGLPEVTLGLLPGAGGTQRTPRLIGAKAALDLMLTGRHASADEALALGLVDRI 182
Query: 181 VTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQ 240
S++ L +A ++ + P R+ D L + A+ + AR + K + +
Sbjct: 183 AQSDDTLAEGLAYAHELVSLDAPPRRT-RDADGLSDRAAAQAAIDAARAELPKKSRGLFS 241
Query: 241 HQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGL 300
+D IE + +G+ E +F + V GLVH FFA+R +KVP
Sbjct: 242 PAKIVDAIEAALTQPFDAGMKLERSLFLQCVDSPQRAGLVHAFFAEREAAKVPEARRASA 301
Query: 301 KPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGK 360
+P V ++ V+GGG MG+GIA A + + V + E + L +G +E GLV +G+
Sbjct: 302 RP--VERIGVVGGGTMGAGIAVAALDAGLPVTMIERDEASLARGRAHVEKVYDGLVAKGR 359
Query: 361 LTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 420
+T L+ L G Y D+VIEAV E + +K+ +F+EL + C P +LATNT
Sbjct: 360 MTPAARAARLERLTGSTSYDALAQADVVIEAVFEDMTVKKAVFAELARVCKPRAMLATNT 419
Query: 421 STIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVP 480
S +D++ + +IG HFFSPAHVM LLEIV R A+V+ + K +KK P
Sbjct: 420 SYLDIDELAASIDRPADVIGLHFFSPAHVMKLLEIVVPARVDAEVVATAFALAKQLKKTP 479
Query: 481 VVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVA 540
V G C GF NR Y +A L+ G ++ID A+R FG P+GPFQ++DLAG +
Sbjct: 480 VRAGVCDGFIGNRILAVYRTAADYLMEDGASPYQIDRAVREFGFPMGPFQVVDLAGGDIG 539
Query: 541 AATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEE 599
A K R+ + D L + G G+ G+G Y Y G++ PDP V I+
Sbjct: 540 WAARKRRAATRDPRARYVEISDRLCERGWFGQKTGRGYYLYPDGARVGTPDPDVDAIVAH 599
Query: 600 CRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPS 659
R I+P + T+ EI+ L ++NE V+ E I +R D+D + G FP
Sbjct: 600 ERAKKGIVPR----TFTDDEILRRYLAAMINEGANVVHEKIALRPLDVDAVFLHGYGFPR 655
Query: 660 YRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
YRGG + +AD VG V ++ ++ F+KPS L E +G
Sbjct: 656 YRGGPMHYADTVGLANVLADIRAFADEDPLFWKPSPLLVELVERG 700
>gi|392410492|ref|YP_006447099.1| 3-hydroxyacyl-CoA dehydrogenase [Desulfomonile tiedjei DSM 6799]
gi|390623628|gb|AFM24835.1| 3-hydroxyacyl-CoA dehydrogenase [Desulfomonile tiedjei DSM 6799]
Length = 709
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 236/703 (33%), Positives = 375/703 (53%), Gaps = 22/703 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFD---IN 68
D VA++ + NPPVN L+ V L + VK IVLTG G F G D I
Sbjct: 13 QDNVAVLFMNNPPVNQLSQSFVDDLAEAVSSGFDDPTVKGIVLTGTGKNFIAGADLTEIY 72
Query: 69 VFQKVHGAGDVSLMPDV-SVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP 127
V ++ SL+P V ++ + IE KP++AA+ G ALGGGLELAM CH R+A
Sbjct: 73 VLKEKE-----SLLPRVEAMSAFFHQIELGPKPVIAAINGNALGGGLELAMACHYRVALH 127
Query: 128 KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 184
QLG PE+ +G+IPG TQRLPR VGL A+EMM + I S GLID V E
Sbjct: 128 GVQLGQPEVKVGLIPGAGGTQRLPRFVGLHDALEMMTVGDPIDSRTALSRGLIDEVTEPE 187
Query: 185 ELLKVSRLWALDIAARRKPW--IRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQ 242
L+V+ A ++A R+ +R ++L S +E + V AR+QA+K A
Sbjct: 188 HFLRVALSAATNLAEGTISLESSRTRNRNNRLPSSAELKAVTSAARVQAEKKAKGYLAPF 247
Query: 243 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 302
++ +E G+ + + +E ++F E + D ++ L+ +F RA ++ ++ + KP
Sbjct: 248 KVIEALENGLSPDIEADIRREGELFAECALSDVAKNLIGIFLNTRAAGRLTRISRV--KP 305
Query: 303 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 362
++VAV+GGG+MGSGI + VL ++ E + +G+ ++ + R K+
Sbjct: 306 ADTKQVAVLGGGVMGSGIVNLLLRRGFDAVLWDITEEAVDRGVASVRKTFEHAIKRKKML 365
Query: 363 QDKANNAL-KMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 421
+ L K L+ + ++ D++IEAVIE++ +KQ I+ +LE+ C + ATNTS
Sbjct: 366 PTELETLLDKRLRVTTSLEDMQEADLIIEAVIENMDIKQSIWKQLEEICKTEAVFATNTS 425
Query: 422 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 481
+ + + Q R IG HFF+PAH M LLEI+ T++TS + + + I K+PV
Sbjct: 426 ALPIAEIASILKDQGRAIGLHFFNPAHQMQLLEIICTQKTSDLTLATSVAFARAIGKIPV 485
Query: 482 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAA 541
+V + GF V+R A L++ GVD RI++A++ FG+P+GP +L DL G +
Sbjct: 486 IVNDSPGFYVSRQLGGLLGGAVYLMADGVDWSRIENAMKDFGMPMGPAELADLTGIDINY 545
Query: 542 ATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECR 601
K F++ R PL++ + ++G G+ G G Y G + P+ VL +I+
Sbjct: 546 HVYKTFEQRLGPRYKMHPLMESIYQTGCYGRKTGMGYMDY-GGDELVPNKKVLDVIQNYL 604
Query: 602 RLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYR 661
+++ P +V+++EI++ +L +NE ++EEG+ +D A + G FP +R
Sbjct: 605 SDNHV----SPKNVSDQEIIDTMLALAINEGALIIEEGVCDEPQHMDLAMIYGTGFPPFR 660
Query: 662 GGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
GGI +AD G VY +L K + +G F+PS L++ G
Sbjct: 661 GGIFRYADKWGIANVYETLIKLERQFGPRFEPSNLLKKMVEAG 703
>gi|126739002|ref|ZP_01754698.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Roseobacter sp. SK209-2-6]
gi|126720183|gb|EBA16890.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Roseobacter sp. SK209-2-6]
Length = 698
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 246/704 (34%), Positives = 381/704 (54%), Gaps = 43/704 (6%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A++ NPPVNAL + I GL E A S + KA+++ G+G + G DI F K
Sbjct: 13 IAVLKAQNPPVNALGVDIRKGLLSGIERAES-EGAKAVLIYGDGRTYFAGADIKEFGKPP 71
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
+P++ N IE +V+A+ G ALGGGLE+A+ H RIA P ++GLP
Sbjct: 72 ---QEPWLPEL-----CNRIEASPLVVVSAMHGTALGGGLEVALSSHYRIAVPTAKMGLP 123
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 191
E+ LG++PG TQRLPR+ G KA+EM+ + I ++E + G+ID + E ++
Sbjct: 124 EVHLGILPGAGGTQRLPRVAGTEKALEMITTGRHIGAKEALEAGIIDRIAEGEPR-EIGL 182
Query: 192 LWALDI----AARRKPWIRSLHRTDKLGSLSEAREVLKLARLQ-AKKTAPNMPQHQACLD 246
++A ++ A RR ++ EA LK R Q + T Q A
Sbjct: 183 VYARELLSAGAGRRAVGEMPAPAAVDFDAIYEA--TLKKGRGQLSPATCVRAVQAAAEAP 240
Query: 247 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 306
+EEG+ +E ++F EL+ D GL+H FF++RA SK+P + G++PR +
Sbjct: 241 SLEEGLK--------RERELFMELMNSDQRLGLIHAFFSERAVSKLPELK--GVEPRQLA 290
Query: 307 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDK- 365
+ VIGGG MG+GIATA +L+ + VV+ E++ E I N++G + RGK+++++
Sbjct: 291 SIGVIGGGTMGAGIATAALLSGLSVVMLEMSEEAAAAAKGRIAGNLQGALKRGKISEEQF 350
Query: 366 ---ANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 422
AL + G Y DVD+VIEAV E + +K+++F +L+ C ILA+NTS
Sbjct: 351 AQLTEEALSLATG---YEALSDVDLVIEAVFEEMSVKKEVFGKLDAVCKKGAILASNTSY 407
Query: 423 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 482
+D+N + TS + +IG HFFSPAHVM LLE+V ++T+ V+ +GK +KK+ V
Sbjct: 408 LDVNEIAAATSRPEDVIGLHFFSPAHVMKLLEVVVADKTALDVVATGFELGKRLKKISVR 467
Query: 483 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAA 542
G C GF NR Y ++A +V G ++ID A+ FG +GPF + DLAG + A
Sbjct: 468 AGVCDGFIGNRILATYRKAADHMVLDGASPYQIDKALTEFGFAMGPFAVADLAGLDIGWA 527
Query: 543 TSK-EFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEEC 600
K + + R S D + ++G G+ GKG Y YE G + P+P V +I
Sbjct: 528 VRKRKRAEGMDPRDRDSSYADKMCEAGNFGQKTGKGYYVYEAGKRGGTPNPEVSDLIAAE 587
Query: 601 RRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSY 660
R I P + T++EI+ + +VNE+ +V+ EGI R D+D + G FP Y
Sbjct: 588 RAEQGIT----PRAFTDEEILNRYMAAMVNEAAKVVGEGIARRPLDVDMTLLFGYGFPRY 643
Query: 661 RGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
RGG + WAD G + + ++K +++ F++ + LE +G
Sbjct: 644 RGGPLKWADIQGLDKILNNIKSYAEEDAYFWEAAPLLETLVAEG 687
>gi|407937505|ref|YP_006853146.1| 3-hydroxyacyl-CoA dehydrogenase [Acidovorax sp. KKS102]
gi|407895299|gb|AFU44508.1| 3-hydroxyacyl-CoA dehydrogenase [Acidovorax sp. KKS102]
Length = 706
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 244/701 (34%), Positives = 366/701 (52%), Gaps = 34/701 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
V ++T+ NPPVNAL + GL ++A + V A++L G G F G DI F K
Sbjct: 19 VLVVTIDNPPVNALGAAVRQGLLAAMQQAQADAAVTAVLLVGAGKAFIAGADIREFGK-- 76
Query: 75 GAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
P V+ L V IE+ KP+VA + G ALGGGLE+A+ H R+A P LG
Sbjct: 77 --------PPVTPILPEVCRAIENLNKPVVAVLHGAALGGGLEVALSAHYRLALPAATLG 128
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 189
LPE+ LG++PG TQR PRL+G+ A +ML + + ++ + GL+D +V + L
Sbjct: 129 LPEVNLGLLPGSGGTQRAPRLMGVQAATTLMLSGQPLKAQAALQAGLVDKLVEGTDPLAA 188
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
+ ++ A + P + RT L +++E + L Q +TA + L +IE
Sbjct: 189 GLAYVRELLAAQAP----VRRTRDL-AIAEPQAALAWLEEQKTETAKKSRGLFSPLKIIE 243
Query: 250 EGIVHGGYS-----GVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRG 304
V G+ +E +F E + GL+H FFA+R KVP +PR
Sbjct: 244 --CVQAALQLPFDEGMARERALFMECLDSPQRAGLIHAFFAEREVVKVPEAQ--AAQPRP 299
Query: 305 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 364
V +AVIGGG MG+GIA A + + V + E ++E + +G +E LV +G++T
Sbjct: 300 VASIAVIGGGTMGAGIAVAALDAGLPVTMIERDAESIARGRANVEKVYNALVAKGRMTDA 359
Query: 365 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 424
+ G Y++ VD+VIEAV E + +K+ +F EL++ C P +LATNTS +D
Sbjct: 360 AKVAVMARYTGSTSYADIAQVDLVIEAVFEDIEVKKTVFRELDRVCKPGAVLATNTSYLD 419
Query: 425 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 484
++ + T +IG HFFSPA++M LLEIV + + V+ + + +KKVPV G
Sbjct: 420 IDAIAAATGRPQDVIGLHFFSPANIMKLLEIVVPAKVAPDVVATAFELARKLKKVPVRAG 479
Query: 485 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATS 544
C GF NR Y Q+A L+ G + ID+A+R FG +GPFQ+ DLAG + AT
Sbjct: 480 VCDGFIGNRILAVYKQAADYLLEDGASPYEIDAAVRGFGFAMGPFQVTDLAGGDIGWATR 539
Query: 545 KEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKP-KPDPSVLPIIEECRRL 603
K ++ + D + + G G+ G+G Y Y +GS+ +PDP VL I++ R
Sbjct: 540 KRRAATRDPQARYVEIADRICERGWFGQKTGRGFYLYPEGSRTGQPDPEVLAIVDAERAK 599
Query: 604 SNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGG 663
I P S T EI+ + +VNE V+ EGI +R D+D V G FP +RGG
Sbjct: 600 KGI----SPRSFTADEIMRRYMAAMVNEGANVVHEGIALRPLDVDVTFVAGYGFPRHRGG 655
Query: 664 IVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+ WAD G V ++ +++ F+KPS L + +G
Sbjct: 656 PMKWADMTGLPKVLADIEAFAKEDPLFWKPSPLLVQLVREG 696
>gi|398383587|ref|ZP_10541655.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingobium sp. AP49]
gi|397724603|gb|EJK85068.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingobium sp. AP49]
Length = 691
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 237/695 (34%), Positives = 363/695 (52%), Gaps = 29/695 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A+IT+ +PPVNAL+ + G+ E A V A+VL G F G DI F
Sbjct: 15 IAVITVNSPPVNALSNAVRQGVASAVETAIGDPAVGAMVLICEGRTFFAGADITEF---- 70
Query: 75 GAGDVSLMPDV-SVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGL 133
G + P + +++LVV E+ KP++AA+ G ALGGGLELA+ H RIA P + GL
Sbjct: 71 --GKPPVEPTLRNLQLVV---ENATKPVIAAIHGTALGGGLELALVAHYRIAVPSAKCGL 125
Query: 134 PELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVS 190
PE+ LG++PG TQRLPR+VG++KA+++M +++ ++GLID + +L +
Sbjct: 126 PEVNLGLLPGAGGTQRLPRIVGVAKALDLMTAGGPVSARAAKEMGLIDELAAEGQLRADA 185
Query: 191 RLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 250
A + +P ++ RT+KL E+ R + +A + +E
Sbjct: 186 IALAQRVLDEGRPLLKVRDRTEKLDEARGKPEIFADFRKANARKFRGFNAPEAIIRCVEA 245
Query: 251 GIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKVA 309
+ G++ E ++F EL S HVFFA+R +KV ++ D + P + KV
Sbjct: 246 ALELPFDDGMIFERQLFNELQADSQSAAQRHVFFAERQAAKVDSLPADTPILP--IAKVG 303
Query: 310 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 369
VIG G MG GIA I V L E N + L +G++ I N +GK+ + +
Sbjct: 304 VIGAGTMGGGIAMNFANAGIPVTLVETNEDALFRGLRIIRGNYETTAKKGKMKPEDVDTR 363
Query: 370 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 429
+ +L G + + D D++IEAV E + +K+++F+ L++ P ILATNTS +D++ +
Sbjct: 364 MGLLTGSIAMEDLADCDLIIEAVFEQIDVKREVFTRLDRIAKPGAILATNTSYLDIDDIA 423
Query: 430 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 489
TS + + G HFFSPA+VM LLE+VRT T ++I M + K I K+ V+VGN GF
Sbjct: 424 AATSRPNSVAGLHFFSPANVMKLLEVVRTRDTKPEIIATAMKLAKTIGKIGVLVGNGYGF 483
Query: 490 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDK 549
NR + A L+ G + +D + FG +G FQ+ DL G V
Sbjct: 484 VGNRILAARNTQADQLILEGATPWAVDKVLYDFGFAMGHFQMRDLVGLDVGWN------- 536
Query: 550 AFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPG 609
P + + + ++L + GR+G+ G Y Y++ K P P + +IE+ I+
Sbjct: 537 --PKTTSSANVREILNEMGRHGQKTKGGFYDYDENRKQTPSPVAMQVIEDFAAKQGIVRR 594
Query: 610 GKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWAD 669
V++ EI + ILF +VNE R+L+EGI RASD+D + G +P YRGG +FWAD
Sbjct: 595 ----DVSDAEIQDRILFAMVNEGARILDEGIASRASDIDIVWITGYGWPKYRGGPMFWAD 650
Query: 670 AVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
G V LK +G F PS +E +G
Sbjct: 651 LQGLPTVLDRLKALEAAHGAAFTPSPLIERLVAQG 685
>gi|84500553|ref|ZP_00998802.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Oceanicola batsensis HTCC2597]
gi|84391506|gb|EAQ03838.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Oceanicola batsensis HTCC2597]
Length = 699
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 240/701 (34%), Positives = 377/701 (53%), Gaps = 31/701 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA++ + NPPVNA + + AGL+D F + KAI L G F G DI F
Sbjct: 19 VALVCVDNPPVNATGVAVRAGLQDAFRKINEEGKAKAIALYCAGRTFIAGADIREF---- 74
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G P ++ V++ +E P V+ + G ALGGG E A+ HAR+ + GLP
Sbjct: 75 --GQPPKAPGLTE--VLSEMEQSAIPTVSIIHGTALGGGYETALATHARVGMKGAKFGLP 130
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 191
E+ LG++PG TQRLPRL G++ A+++ + + + EEG + G ID VV + + +++
Sbjct: 131 EVLLGILPGAGGTQRLPRLSGIAYALDIAVSGRHVPVEEGVEKGAIDRVVEAGDPREIAI 190
Query: 192 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 251
++ A P RTD+L + ++ V + + KK P++ C+ I
Sbjct: 191 AMGQEVVAGTLPT----RRTDQLQAQADDAAVQQTLEMVQKKN-PHLINLAECVKAIAAS 245
Query: 252 IVHGGYSGVLKEAKVFKELVMLDTSR--GLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 309
G+ E + F LV +++ + GL+H FF +RA S +P + R + K+
Sbjct: 246 -TKPIDEGLAAEREHF--LVCMNSPQRSGLIHAFFGERAVSNIPEAKG---ETRSLDKIG 299
Query: 310 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 369
VIGGG MGSGI T+ ++ I V L EV E L +G+ TI N+ G ++RGK+T DK + A
Sbjct: 300 VIGGGTMGSGITTSCLMAGIPVRLIEVQQEGLDRGVATITKNLDGALSRGKMTSDKRDAA 359
Query: 370 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 429
L ML+ L+ + DVD+VIEAV E + +K+ IF +L C P ILA+NTS +D++ +
Sbjct: 360 LAMLEPSLNMEDLSDVDLVIEAVFEKMEIKKDIFGKLNTICKPGAILASNTSYLDIDKIA 419
Query: 430 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 489
T ++G HFFSPAHVM LLEIV+ E+T+ + + K +KKV V+ C GF
Sbjct: 420 ATTDRPQDVLGLHFFSPAHVMRLLEIVQGEKTAPDALATGFALAKKLKKVGVLAQVCDGF 479
Query: 490 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAAT-SKEFD 548
NR Y + LV G +D+A+ +FG+ +GP ++ DLAG + T + +
Sbjct: 480 IGNRILGHYGKVISYLVLDGASPAEVDTALENFGMAMGPHKVGDLAGLDIGYMTRQRRKE 539
Query: 549 KAFP-DRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIM 607
+ P D + + D + + G+ GKG Y YE G+ P P+P+V II+E R I
Sbjct: 540 EGLPADERYGGDIADRICEREGYGRKTGKGYYLYETGA-PVPNPAVDEIIDEVRAEKGIT 598
Query: 608 PGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFW 667
P TE+EIV+ + ++E+ RV+E+G R D+D + G FP +RGG + +
Sbjct: 599 PK----EFTEQEIVDRYMTAFISEATRVVEDGTAKRPIDVDMVFLFGYGFPRFRGGPLHY 654
Query: 668 ADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLS 708
AD +GA + ++++++ N+++ L + A G +
Sbjct: 655 ADTIGAAELVRRIEEYAKEDPNYWQVPPLLRKMADDGTTFA 695
>gi|94984861|ref|YP_604225.1| 3-hydroxyacyl-CoA dehydrogenase [Deinococcus geothermalis DSM
11300]
gi|94555142|gb|ABF45056.1| 3-hydroxyacyl-CoA dehydrogenase [Deinococcus geothermalis DSM
11300]
Length = 695
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 249/693 (35%), Positives = 366/693 (52%), Gaps = 28/693 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
V ++T+ NPPVNA + + GL + A + + ++A+V+ G G F G DI F
Sbjct: 12 VLVLTINNPPVNAFSPGVPEGLHAGLDTAEADEGIRAVVIMGGGRTFIAGADIKTF---- 67
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
D+ + + ++ KP VAA+ G ALGGGLE+A+ C+ R+A +LGLP
Sbjct: 68 ---DLPREQAPDLRGFIARLDAFPKPTVAAIHGTALGGGLEVALACNYRVATRDARLGLP 124
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 191
E+ LGV+PG TQRLPR+VG KA+EMML I + E LGL+DA+V + L+
Sbjct: 125 EVKLGVLPGAGGTQRLPRVVGPQKALEMMLSGNPIGATEAKALGLVDALVEGD--LREGA 182
Query: 192 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 251
+ + A +P R R K S E+ AR KKT +D+ E
Sbjct: 183 VAFARVHADDRPLPRISERPVKDAS----PELFAAAREGIKKTHRGQLAPSLIIDLAEMA 238
Query: 252 IVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVI 311
G EA++F + SRGL H+FFA+R K+P +T + +V ++
Sbjct: 239 ATRPFAEGWDAEARLFMQAKDSPQSRGLRHIFFAEREAGKIPGLTK-DTPTTEITRVGIV 297
Query: 312 GGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALK 371
G G MG GIA + I V + E + E L +G+ TI N +G+LT ++ L
Sbjct: 298 GAGTMGGGIAMNFLNVGIPVTIVETSQEALDRGLATIRRNYENTAHKGRLTMEQVEQRLS 357
Query: 372 MLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEK 431
+L LD + D D++IEAV E + +K+ IF L+ P ILATNTST+D+N +
Sbjct: 358 LLTPTLDLTALSDADLIIEAVFEDMDVKKDIFRRLDSIAKPGAILATNTSTLDVNEIASV 417
Query: 432 TSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAV 491
TS +++IG HFFSPA+VM LLEIVR ++TS V+ + + K I KV VVVG C GF
Sbjct: 418 TSRPEQVIGLHFFSPANVMRLLEIVRADKTSDSVLATCLNLAKRIGKVGVVVGVCDGFVG 477
Query: 492 NRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAF 551
NR Y AR LV G D+A+ + GLP+GPF++ D+AG V + K
Sbjct: 478 NRMIHRYGDEARKLVEEGARPQDADAAMHALGLPMGPFEMSDMAGLDVGYLIRQHQAKV- 536
Query: 552 PDRSFQSP--LVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPG 609
R P +D +++ GR G+ G+Y Y G +P P + +I + R I
Sbjct: 537 --RGLPKPDGWLDRIVERGRKGQKTQAGIYDYPDGRRPVPSAEIDQLIRDYRAEKGI--- 591
Query: 610 GKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWAD 669
+P ++++E+ E +++ +VNE ++LEEGI RA D+D + G FP+YRGG + +AD
Sbjct: 592 -QPREISQEELTERLVYSLVNEGAKILEEGIAQRAGDIDVIYIYGYGFPAYRGGPMGYAD 650
Query: 670 AVGANYVYTSLKKWSQLYGNFFKPSRFLEERAT 702
+G V +L+K+ Q K R EE T
Sbjct: 651 EMGLKNVVAALEKYGQTPAPLLK--RLAEEGKT 681
>gi|372278580|ref|ZP_09514616.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Oceanicola sp. S124]
Length = 697
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 251/713 (35%), Positives = 380/713 (53%), Gaps = 40/713 (5%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
V+ EV D VA++ + NPPVNA + GL E + VKAI + G F G
Sbjct: 10 VSTEVVGD-VALVCIDNPPVNASGHAVRVGLVGAIEALNAEAAVKAIAIWCAGRTFMAGA 68
Query: 66 DINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA 125
DI F K ++P+V N++E + P+VA + G ALGGG EL + HAR+A
Sbjct: 69 DIREFGK---PSKEPVLPEV-----YNILEASQIPVVAVMHGTALGGGFELGLAAHARVA 120
Query: 126 APKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 182
+++GLPE+ +G++PG TQRLPRL G+ A++M L + ++ EE G ID VV
Sbjct: 121 IAGSKVGLPEVLIGLLPGAGGTQRLPRLAGVDFALDMSLSGRQVSVEEAQAAGAIDRVVE 180
Query: 183 SEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQ 242
V+ A ++ A P R+ T ++ + L R +K +P++
Sbjct: 181 GAPR-DVALAMAQEVVAGTLPTRRTSEITIEIDHTA-----LDGIRAATQKKSPHLVNPL 234
Query: 243 ACLDVI---EEGIVHGGYSGVLK-EAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDI 298
C+D I ++ I G LK E + F + + GL+H FF +RA S +P
Sbjct: 235 KCIDAIAAADQPIAEG-----LKVERQCFLDCMETPQRAGLIHAFFGERAVSSIPEAKG- 288
Query: 299 GLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTR 358
+ R ++ V VIGGG MGSGIATA +L + V L EV E L +G+ TI N+ G V+R
Sbjct: 289 --ETRDIQSVGVIGGGTMGSGIATACLLAGLPVTLVEVAQEGLDRGVATITKNLEGAVSR 346
Query: 359 GKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 418
GK++ K + AL L L DVD+VIEAV E + +K++IF +L+ C P +LA+
Sbjct: 347 GKMSAAKKDAALTSLTPALQLDALADVDLVIEAVFEDMGVKREIFGKLDAICKPGAVLAS 406
Query: 419 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKK 478
NTS +D+N + TS ++G HFFSPAHVM LLEIV+ E+T+ V+ + K +KK
Sbjct: 407 NTSYLDVNEIASCTSRPGDVLGLHFFSPAHVMRLLEIVQGEQTAPDVLATGFALAKRLKK 466
Query: 479 VPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYG 538
V V+ C GF NR Y+ + LV G ++D+A+ FG +GP ++ DLAG
Sbjct: 467 VGVLAQVCDGFIGNRILAHYALCSGYLVLDGASPAQVDAALEGFGFAMGPHKVGDLAGLD 526
Query: 539 VAAATSKEFDKAF---PDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLP 595
+ T K KA P + + D + ++G G+ GKG Y YE G+ P P+P V
Sbjct: 527 IGWMTRKR--KAATRDPAERYAGQIPDRICENGWFGRKAGKGYYLYEGGA-PVPNPEVAT 583
Query: 596 IIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGM 655
II+E R I P + T+ EIVE + +++E+ RV+E+G R D+D + G
Sbjct: 584 IIDEVRAEQGITPK----TFTDDEIVERYMTAMISEAARVVEDGTAKRPLDVDMVFLFGY 639
Query: 656 SFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLS 708
FP +RGG + +AD +GA + ++++++ ++++ L A G +
Sbjct: 640 GFPRFRGGPLHYADTLGAAELVARIERYAEEDPHYWQVPDILRRMAADGTSFA 692
>gi|86140265|ref|ZP_01058826.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Roseobacter sp. MED193]
gi|85823068|gb|EAQ43282.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Roseobacter sp. MED193]
Length = 697
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 244/699 (34%), Positives = 384/699 (54%), Gaps = 34/699 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A++ NPPVNAL I GL E A +D KA+++ G+G + G DI F K
Sbjct: 13 IAVLKAQNPPVNALGYDIREGLLAGIERA-EKDGAKAVLIYGDGRTYFAGADITEFGKPP 71
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
+PD+ IE +V+A+ G ALGGGLE+A+G H RIA P ++GLP
Sbjct: 72 RG---IFLPDLCTR-----IESSPLLVVSALHGTALGGGLEVALGSHYRIAVPSARVGLP 123
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE--ELLKV 189
E+ +GV+PG TQRLPRL+G+ +++++ + + ++E +LG++D + E E+
Sbjct: 124 EVLIGVMPGAGGTQRLPRLIGVEASVDVITSGRQVGAKEALELGILDRIEEGEPREIGLA 183
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLAR-LQAKKTAPNMPQHQACLDVI 248
L+ A R+P + + + + + +VLK R L A A + QAC ++
Sbjct: 184 YTQELLESGATRRP-VSEMPAPEAVDFDALYEKVLKKGRGLLAPAVA--VRGIQACCELP 240
Query: 249 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 308
+ G+ +E ++F EL+ D +G++H FF++RA SK+P + G+ PR + +
Sbjct: 241 FD-------EGMKRERELFMELMNTDQRQGMIHAFFSERAVSKLPELK--GVAPRELGSI 291
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
VIGGG MG+GIATA +L+ + VV+ E+ I N++G + RGK+++ +
Sbjct: 292 GVIGGGTMGAGIATAALLSGLPVVMLEMTEAAAEAAKGRITGNLQGALKRGKISEAQFTQ 351
Query: 369 -ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 427
++L DY+ DVD+VIEAV E + +K+ +F +L++ C ILA+NTS +D+N
Sbjct: 352 LTEEILTLSTDYAALSDVDLVIEAVFEEMSVKKVVFGKLDEVCKKGAILASNTSYLDVNE 411
Query: 428 VGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 487
+ TS + +IG HFFSPAHVM LLEIV ++T+ V+ +G+ +KK+ V G C
Sbjct: 412 IAACTSRPEDVIGLHFFSPAHVMKLLEIVVADKTALDVVATGFALGQRLKKISVRAGVCD 471
Query: 488 GFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSK-E 546
GF NR Y ++A ++ G ++ID A+ FG +GPF + DLAG + A K +
Sbjct: 472 GFIGNRILSTYRKAADHMILDGASPYQIDKALTDFGFAMGPFAVADLAGLDIGWAMRKRK 531
Query: 547 FDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSN 605
+ R S VD + ++G G+ GKG Y YE G + P+P V +I R
Sbjct: 532 RAEGMDPRERDSSYVDKMCEAGNFGQKTGKGYYVYEAGKRGGTPNPEVSDLIAAERADKG 591
Query: 606 IMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIV 665
I P S T++EIV + +VNE+ +V+ EGI R D+D + G FP YRGG +
Sbjct: 592 IT----PRSFTDEEIVTRYMAAMVNEAAKVVGEGIARRPLDVDMTLLFGYGFPRYRGGPL 647
Query: 666 FWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
WAD G + V ++K ++ F+ P+ LE+ +G
Sbjct: 648 KWADIEGLDKVLATIKAGAEEDSYFWDPAPLLEKLVAEG 686
>gi|381202863|ref|ZP_09909972.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Sphingobium yanoikuyae
XLDN2-5]
Length = 691
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 235/695 (33%), Positives = 363/695 (52%), Gaps = 29/695 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A+IT+ +PPVNAL+ + G+ E A V A+VL G F G DI F
Sbjct: 15 IAVITVNSPPVNALSNAVRQGVASAVETAIGDPAVGAMVLICEGRTFFAGADITEF---- 70
Query: 75 GAGDVSLMPDV-SVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGL 133
G + P + +++LVV E+ KP++AA+ G ALGGGLELA+ H RIA P + GL
Sbjct: 71 --GKPPVEPTLRNLQLVV---ENATKPVIAAIHGTALGGGLELALVAHYRIAVPSAKCGL 125
Query: 134 PELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVS 190
PE+ LG++PG TQRLPR+VG+ KA+++M ++++ +GL+D + +L +
Sbjct: 126 PEVNLGLLPGAGGTQRLPRIVGVEKALDLMTAGSPVSAKAAKGMGLVDELAVEGQLRADA 185
Query: 191 RLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 250
A + +P ++ RT+KL E+ R + +A + +E
Sbjct: 186 IALAQRVLDEGRPLLKVRDRTEKLDEARGKPEIFADFRKANARKFRGFNAPEAIIRCVEA 245
Query: 251 GIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKVA 309
+ G+ E ++F EL S HVFFA+R +KV ++ D + P + KV
Sbjct: 246 SLDLPFDEGMTFERQLFNELQADSQSAAQRHVFFAERQAAKVDSLPADTPILP--IAKVG 303
Query: 310 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 369
VIG G MG GIA I V L E N + L +G++ I N +GK+ + +
Sbjct: 304 VIGAGTMGGGIAMNFANAGIPVTLVETNEDALFRGLRIIRGNYETTAKKGKMKPEDVDTR 363
Query: 370 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 429
+ +L G + + D D++IEAV E + +K+++F++L++ P ILATNTS +D++ +
Sbjct: 364 MGLLTGSIAMEDLADCDLIIEAVFEQIDVKREVFAKLDRIAKPGAILATNTSYLDIDDIA 423
Query: 430 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 489
TS D ++G HFFSPA+VM LLE+VRT+ T ++I M + K I K+ V+VGN GF
Sbjct: 424 AATSRPDSVVGLHFFSPANVMKLLEVVRTKDTKPEIIATAMKLAKTIGKIGVLVGNGYGF 483
Query: 490 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDK 549
NR + A L+ G + +D + FG +G FQ+ DL G V
Sbjct: 484 VGNRILAARNTQADQLILEGATPWAVDKVLYDFGFAMGHFQMRDLVGLDVGWN------- 536
Query: 550 AFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPG 609
P + + + ++L + GR+G+ G Y Y++ K P P + +IE+ I
Sbjct: 537 --PKTTSSANVREILNEMGRHGQKTKGGFYDYDENRKQTPSPVAMQVIEDFAAKQGITRR 594
Query: 610 GKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWAD 669
+++ EI + ILF +VNE R+L+EGI RASD+D + G +P YRGG +FWAD
Sbjct: 595 ----DISDAEIQDRILFAMVNEGARILDEGIASRASDIDIVWITGYGWPKYRGGPMFWAD 650
Query: 670 AVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
G V L+ +G F PS +E +G
Sbjct: 651 LHGLPTVLDRLRALEAAHGAAFTPSPLIERLVAQG 685
>gi|311108557|ref|YP_003981410.1| fatty acid oxidation complex subunit alpha [Achromobacter
xylosoxidans A8]
gi|310763246|gb|ADP18695.1| fatty acid oxidation complex subunit alpha 2 [Achromobacter
xylosoxidans A8]
Length = 702
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 247/704 (35%), Positives = 372/704 (52%), Gaps = 36/704 (5%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVF- 70
D V ++ L +PP+N L P+ + + + A V+AIVL G G FS G DI F
Sbjct: 14 QDDVLLLGLNHPPLNTLDHPLRQQVHEALQAAAQDASVQAIVLHGAQGNFSAGADIREFD 73
Query: 71 --QKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPK 128
++ AGDV+ NLI KPIVAA++G+ALGGGLELA+ HAR+ A
Sbjct: 74 QPRQAPWAGDVA-----------NLIAASSKPIVAALQGVALGGGLELALAAHARVGAAN 122
Query: 129 TQLGLPEL---TLGVIPGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEE 185
+LGLPE+ L GTQRLPRL+G + A+ ++L +S+ + LGL+D V
Sbjct: 123 ARLGLPEVKLGLLPGGGGTQRLPRLIGAAAALPLILEGRSVDGKAALTLGLLDQVCDEAS 182
Query: 186 LL----KVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 241
LL + +R D AA R+ + + L +++ RE RL AK ++P
Sbjct: 183 LLDCAVRKARALCADHAAARRGAAAADDKQAGLAAVAAQRE-----RLAAKPH--SLPAQ 235
Query: 242 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 301
LD ++ + G+ E + F + V +GL H FFA+R K P +
Sbjct: 236 HLLLDCLQAALELPLQEGLKVEREAFLQCVASPEHKGLAHAFFAERLAGKSPAGA---AR 292
Query: 302 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 361
PR V++ VIGGG MG+GIA A + + VVL E ++ L G + I+ + V G+L
Sbjct: 293 PRPVQRAGVIGGGTMGAGIAVAMLDAGLDVVLIERDAASLQAGQERIDGVYQRQVNSGRL 352
Query: 362 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 421
L L DY+ VD+V+EAV E + +K ++F++L++ C P ILATNTS
Sbjct: 353 DAATREQRLSRLSTATDYAALAAVDLVVEAVFEDMDVKTQVFAQLDRVCKPGAILATNTS 412
Query: 422 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 481
+D+N + S +IG HFFSPA++M LLEIV E+ + V+ + + + KVPV
Sbjct: 413 YLDINQIARSISRPQDVIGLHFFSPANIMKLLEIVVPEQVADDVVATGFALARRLGKVPV 472
Query: 482 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAA 541
G C GF NR + Y ++A ++ G ++ID A+ FG +GPF+ DL G +
Sbjct: 473 RAGVCDGFIGNRILYVYREAANHMMEDGASPYQIDQALERFGYAMGPFRTADLTGGDIGW 532
Query: 542 ATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTY-EKGSKPKPDPSVLPIIEEC 600
AT K P + + D L + G G+ G+G Y Y E+G + KPD VL +I++
Sbjct: 533 ATRKRKAATRPPEARYVQVADRLCERGWFGQKTGRGYYLYPERGQRGKPDAEVLALIDQE 592
Query: 601 RRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSY 660
R I +P S +++IV + +VNE+ +VL++GI +R +D+D A V G FP +
Sbjct: 593 RAARGIE--ARPFS--DEDIVRRYMAALVNEAAKVLDDGIALRPADIDAALVNGYGFPRW 648
Query: 661 RGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
RGG + +AD VG V ++ +++ F+ PS L A +G
Sbjct: 649 RGGPMKYADDVGLAAVLADIESYAKEDAAFWAPSELLRRLAREG 692
>gi|427411688|ref|ZP_18901890.1| hypothetical protein HMPREF9718_04364 [Sphingobium yanoikuyae ATCC
51230]
gi|425709978|gb|EKU73001.1| hypothetical protein HMPREF9718_04364 [Sphingobium yanoikuyae ATCC
51230]
Length = 691
Score = 380 bits (977), Expect = e-102, Method: Compositional matrix adjust.
Identities = 236/689 (34%), Positives = 361/689 (52%), Gaps = 29/689 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A+IT+ +PPVNAL+ + G+ E A V A+VL G F G DI F
Sbjct: 15 IAVITVNSPPVNALSNAVRQGVASAVETAIGDPAVGAMVLICEGRTFFAGADITEF---- 70
Query: 75 GAGDVSLMPDV-SVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGL 133
G + P + +++LVV E+ KP++AA+ G ALGGGLELA+ H RIA P + GL
Sbjct: 71 --GKPPVEPTLRNLQLVV---ENATKPVIAAIHGTALGGGLELALVAHYRIAVPSAKCGL 125
Query: 134 PELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVS 190
PE+ LG++PG TQRLPR+VG+ KA+++M ++++ ++GLID + +L +
Sbjct: 126 PEVNLGLLPGAGGTQRLPRIVGVEKALDLMTAGSPVSAKAAKEMGLIDELAIEGQLRADA 185
Query: 191 RLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 250
A + +P ++ RT+KL E+ R + +A + +E
Sbjct: 186 IALAQRVLDEGRPLLKVRDRTEKLDEARGKPEIFADFRKANARKFRGFNAPEAIIRCVEA 245
Query: 251 GIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKVA 309
+ G+ E ++F EL S HVFFA+R +KV ++ D + P + KV
Sbjct: 246 SLDLPFDEGMTFERQLFNELQADSQSAAQRHVFFAERQAAKVDSLPADTPILP--IAKVG 303
Query: 310 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 369
VIG G MG GIA I V L E N + L +G++ I N +GK+ + +
Sbjct: 304 VIGAGTMGGGIAMNFANAGIPVTLVETNEDALFRGLRIIRGNYETTAKKGKMKPEDVDTR 363
Query: 370 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 429
+ +L G + + D D++IEAV E + +K+++F +L++ P ILATNTS +D++ +
Sbjct: 364 MGLLTGSIAMEDLADCDLIIEAVFEQIDVKREVFGKLDRIAKPGAILATNTSYLDIDDIA 423
Query: 430 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 489
TS D ++G HFFSPA+VM LLE+VRT+ T ++I M + K I K+ V+VGN GF
Sbjct: 424 AATSRPDSVVGLHFFSPANVMKLLEVVRTKDTKPEIIATAMKLAKTIGKIGVLVGNGYGF 483
Query: 490 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDK 549
NR + A L+ G + +D + FG +G FQ+ DL G V
Sbjct: 484 VGNRILAARNTQADQLILEGATPWAVDKVLYDFGFAMGHFQMRDLVGLDVGWN------- 536
Query: 550 AFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPG 609
P + + + ++L + GR+G+ G Y Y++ K P P + +IE+ G
Sbjct: 537 --PKTTSSANVREILNEMGRHGQKTKGGFYDYDENRKQTPSPVAMQVIEDFAAKQ----G 590
Query: 610 GKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWAD 669
+++ EI + ILF +VNE R+L+EGI RASD+D + G +P YRGG +FWAD
Sbjct: 591 MTRRDISDAEIQDRILFAMVNEGARILDEGIASRASDIDIVWITGYGWPKYRGGPMFWAD 650
Query: 670 AVGANYVYTSLKKWSQLYGNFFKPSRFLE 698
G V LK +G F PS +E
Sbjct: 651 LQGLPTVLDRLKALEAAHGAAFTPSPLIE 679
>gi|414170055|ref|ZP_11425669.1| hypothetical protein HMPREF9696_03524 [Afipia clevelandensis ATCC
49720]
gi|410884727|gb|EKS32547.1| hypothetical protein HMPREF9696_03524 [Afipia clevelandensis ATCC
49720]
Length = 695
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 246/698 (35%), Positives = 387/698 (55%), Gaps = 26/698 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+D +AI+T+ +PPVNAL+ + GL + + A + D VKAIV+ G F G DI F
Sbjct: 10 HDAIAIVTIDSPPVNALSAAVRKGLAEGVKSAQADDSVKAIVIACAGRTFVAGADITEF- 68
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
G P S+ V+ +IE+ KP+VAA+ G ALGGGLELA+GCH R+A +L
Sbjct: 69 -----GKPPQSP--SLHEVIEVIENSTKPVVAAIHGTALGGGLELALGCHYRVAVKDAKL 121
Query: 132 GLPEL---TLGVIPGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
GLPE+ L GTQRLPR VG A++M++ + I++++ K GLI+ +V + +
Sbjct: 122 GLPEVKLGLLPGGGGTQRLPRAVGPELAVKMIVGGEPISAQDALKNGLIEEIVDAPPAVG 181
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 248
+A I A ++P R KL + R + A A K + + + +
Sbjct: 182 -GESFARKIVAEKRPLRRLRDDDSKLAAAKADRSIFTNAAAAANKRSRGLEAPVTAAEAV 240
Query: 249 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 308
+ + E ++F +L+ D S+ + FFA+RA +K+ V D G K R V++V
Sbjct: 241 SHSLDQPFDQALKTERELFLKLMNGDQSKAQRYAFFAERAAAKIDGVPD-GTKGREVKQV 299
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
AVIG G MG GIA + I V + E+ E L +G+ ++ N RG + D
Sbjct: 300 AVIGAGTMGGGIAMSFANAGIPVTIIEMADEPLKRGLGIMQKNYEATAARGGIPADAPAK 359
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
+ ++KG + KD D++IEAV E++ +K+++F++L++ P +LA+NTS +D+N +
Sbjct: 360 RMGLIKGAVGLENVKDADLIIEAVFETMEIKKEVFTKLDQFAKPGAVLASNTSYLDINKI 419
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
+ T ++G HFFSPA+VM L EIVR +T+ ++ + + K I KVPVVVG C G
Sbjct: 420 ADVTKRPQDVLGMHFFSPANVMKLCEIVRGAKTAPDALVTAVNIAKKIAKVPVVVGVCDG 479
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR S+ + + G ++D+ + FG+P+GPF + DLAG + + K
Sbjct: 480 FVGNRMLAARSKQSEKFLFEGALPQQVDAVVTKFGMPMGPFAMGDLAGLDIGWRSRK--- 536
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIM 607
DR +S + D L ++GR G+ GKG Y YE+GS+ P PDP V +I+E L+ +
Sbjct: 537 ----DRGIKSEIADALCEAGRFGQKTGKGYYKYEQGSRSPLPDPEVEKLIDET--LAKL- 589
Query: 608 PGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFW 667
G K ++++EI+E +++P++NE R+LEE I R SD+D + G +P YRGG +F+
Sbjct: 590 -GLKRREISDEEILERMVYPMINEGARILEEKIAARPSDIDVVWLYGYGWPIYRGGPMFY 648
Query: 668 ADAVGANYVYTSLKKWS-QLYGNFFKPSRFLEERATKG 704
AD VG + L ++ Q +P+ L+ A +G
Sbjct: 649 ADQVGLKKIADRLSFYAKQTNDPSLEPAPLLKRLADEG 686
>gi|421870892|ref|ZP_16302521.1| Enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase / 3-hydroxybutyryl-CoA epimerase [Burkholderia
cenocepacia H111]
gi|358069221|emb|CCE53399.1| Enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase / 3-hydroxybutyryl-CoA epimerase [Burkholderia
cenocepacia H111]
Length = 720
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 242/699 (34%), Positives = 363/699 (51%), Gaps = 23/699 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D V ++T+ +PPVNAL+ + GL D + A + D ++A+++ G G F G DI F
Sbjct: 29 RDKVLVVTIDHPPVNALSADVRRGLADAIDAAQADDAIRAVLIVGAGRNFIAGADIREFG 88
Query: 72 KVHGAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKT 129
K P V L V IE KP+V A+ G LGGGLE+A+ H R+A P
Sbjct: 89 K----------PPVPPSLPDVCERIESGTKPVVVALHGATLGGGLEVALAAHYRLAVPGA 138
Query: 130 QLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL 186
+LGLPE+TLG++PG TQR PRL+G A+++ML + ++EE LGL+D V S++
Sbjct: 139 KLGLPEVTLGLLPGAGGTQRAPRLIGAKAALDLMLTGRHASAEEALALGLVDRVAHSDDT 198
Query: 187 LKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLD 246
L +A ++ + P +R L + A+ + AR + K + + +D
Sbjct: 199 LAEGLAYAQELVSLGAP-VRRTRDAHGLADRTAAQAAIDAARAELPKRSRGLFSPAKIVD 257
Query: 247 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 306
+E + +G+ E +F + + GLVH FFA+R +K P +P V
Sbjct: 258 AVEAALTQSFDAGMKFERSLFLQCLDSPQRAGLVHAFFAEREAAKAPEARRASARP--VE 315
Query: 307 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 366
++ V+GGG MG+GIA A + + V + E + L +G +E GLV +G++T
Sbjct: 316 RIGVVGGGTMGAGIAVAALDAGLPVTMIERDEASLTRGRAHVEKVYDGLVAKGRMTPAAH 375
Query: 367 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 426
L KG Y VD+VIEAV E + +KQ +F+EL + C P +LATNTS +D++
Sbjct: 376 AARLARFKGSTSYDALAQVDVVIEAVFEDMAVKQAVFAELARVCKPGAVLATNTSYLDID 435
Query: 427 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 486
+ +IG HFFSPA+VM LLEIV R S V+ + + +KK PV G C
Sbjct: 436 ALAASIDRPADVIGLHFFSPANVMKLLEIVVPARVSPDVVATAFALARQLKKTPVRAGVC 495
Query: 487 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKE 546
GF NR Y +A L+ G ++ID A+R FG P+GPFQ++DLAG + AT K
Sbjct: 496 DGFIGNRILAVYRTAADYLMEDGASPYQIDRAVREFGFPMGPFQVVDLAGGDIGWATRKR 555
Query: 547 FDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSN 605
+ + D L + G G+ G+G Y Y G++ PDP V I+ E R
Sbjct: 556 RAATRDPNARYVEISDRLCERGWFGQKTGRGYYLYLDGARVGTPDPEVDAIVAEERAKKG 615
Query: 606 IMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIV 665
I P + T+ EI+ L ++NE V+ E I +R D+D + G FP YRGG +
Sbjct: 616 IT----PRTFTDDEILRRYLAAMINEGANVVHEKIALRPLDVDAVFLHGYGFPRYRGGPM 671
Query: 666 FWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+AD +G V ++ +++ F+KPS L + +G
Sbjct: 672 HYADTLGLANVLADIRTFAKDDPLFWKPSPLLVDLVARG 710
>gi|262195563|ref|YP_003266772.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase protein [Haliangium
ochraceum DSM 14365]
gi|262078910|gb|ACY14879.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Haliangium
ochraceum DSM 14365]
Length = 686
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 253/704 (35%), Positives = 379/704 (53%), Gaps = 33/704 (4%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
+T E D + +IT NPPVNAL+ + GL FE A + D + A+VL G F G
Sbjct: 4 ITTERRGD-ILVITSDNPPVNALSAAVRQGLAAAFEAAEADDAIAALVLCCRGRTFFAGA 62
Query: 66 DINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA 125
DI F G +MP + V+ E KPIVAA+ G ALGGG ELA+GCH R+A
Sbjct: 63 DITEF------GKPPVMPLLPS--VIERAEALGKPIVAAIHGTALGGGCELALGCHYRVA 114
Query: 126 APKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 182
P ++G PE+ LG++PG TQRLPRLVG++ A+EM + I++ + GLID VV
Sbjct: 115 VPTAKIGTPEVKLGLLPGAGGTQRLPRLVGVALALEMCARGEPISAARAHQAGLIDRVVD 174
Query: 183 S--EELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQ 240
+ E+ L + + A +P R R + S + A E + R ++
Sbjct: 175 TDDEDGLLEQAIAFAEEIAAVRPIPRVGERELAIDSEALA-ETVAAFRAANERRFRGFDA 233
Query: 241 HQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGL 300
+A + +E G+ E + F +L + S + H+FFA+R +K+ ++ G+
Sbjct: 234 PEANIRCVERAAQVPLAEGLQYEREEFSKLSEGEQSAAMRHLFFAERKAAKIDDLP-AGI 292
Query: 301 KPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGK 360
+ R + +V +IG G MG GIA + + V L E + E L +G+ I N + +G+
Sbjct: 293 ETRAIARVGIIGAGTMGGGIAMNFVQAGVPVTLVETSQEALDRGLGVIAKNYQRSAAKGR 352
Query: 361 LTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 420
T + + L +L G L E + D++IEAV E + +K +IF++L++ P ILATNT
Sbjct: 353 FTPAQVESWLGLLTGTLAIEELAECDLIIEAVFEDMAVKTQIFAKLDEIAKPGAILATNT 412
Query: 421 STIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVP 480
S +D++ + S ++G HFFSPA+VM LLE+VR RT+ V+ +M + K I+KV
Sbjct: 413 SYLDIDEIAASISRPGDVLGTHFFSPANVMKLLELVRGARTAPDVLATVMALAKKIRKVA 472
Query: 481 VVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVA 540
VV G C GF NR P + A L+ G ++D+ +FG+P+GPFQ+ DLAG +
Sbjct: 473 VVSGVCHGFIGNRMLEPRQREASKLLLEGATPEQVDAVHVAFGMPMGPFQMADLAGVDIG 532
Query: 541 AATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEEC 600
E ++ D+ L GR G+ G G Y Y++ +P P P V II E
Sbjct: 533 WHRDPERVESVRDQ---------LCAEGRWGQKKGAGFYDYDERRQPSPSPRVGEIIAEW 583
Query: 601 R-RLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPS 659
R RL G + ++ + EIV L+P+VNE R+L EGI RASD+D V G +P
Sbjct: 584 RERL-----GVEARAIDDDEIVARTLYPMVNEGARILAEGIAQRASDIDVVWVYGYGWPV 638
Query: 660 YRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATK 703
YRGG +FWAD+VGA + L+++++ G P L E+A++
Sbjct: 639 YRGGPMFWADSVGAATIVAGLERYAERSGIAVAP--LLREKASQ 680
>gi|94313504|ref|YP_586713.1| multifunctional: 3-hydroxybutyryl-CoA epimerase,
delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase,
enoyl-CoA hydratase (N-terminal); 3-hydroxyacyl-CoA
dehydrogenase (C-terminal) [Cupriavidus metallidurans
CH34]
gi|93357356|gb|ABF11444.1| multifunctional: 3-hydroxybutyryl-CoA epimerase,
delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase,
enoyl-CoA hydratase (N-terminal); 3-hydroxyacyl-CoA
dehydrogenase (C-terminal) [Cupriavidus metallidurans
CH34]
Length = 696
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 252/675 (37%), Positives = 366/675 (54%), Gaps = 22/675 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA++++ PVN L + + D + A + V+AIVLTG FS G DI F
Sbjct: 13 VAVLSMNKGPVNGLGAALRTAIADAVDRANADPAVQAIVLTGTPRAFSAGADITEF---- 68
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G + S P++ V V++ IE KP+VAA+ G LGGGLELA+GCH R+A P QLG P
Sbjct: 69 GTPNASREPNLRV--VIDQIEGGAKPVVAAIAGQCLGGGLELALGCHFRVALPDAQLGFP 126
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 191
E+ +G++PG TQR+PRL+GL A+ M+ L ++ LID V + +
Sbjct: 127 EVKIGLLPGGGGTQRMPRLIGLEPAVNMVTLGNPAPAKSFAGTPLIDRVADGDVVAAAVA 186
Query: 192 LWALDIAARRKPWIRSLHRTDKLG-SLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 250
IAA+ P RT L S + L+ AR + A L+ +
Sbjct: 187 FAQELIAAKTPP-----RRTRALSVSHPQGESFLQFARNSVAQQAKGQIAPMKALEAVAA 241
Query: 251 GIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAV 310
+ G+ E + F L+ SR L H+F A+ A SK+ ++ G R +RKV V
Sbjct: 242 SLTKSFDEGMRVEREGFMSLMASPESRALRHIFKAEHAASKIADLP-AGTPLREIRKVGV 300
Query: 311 IGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNAL 370
IG G MG GI + I VVL E+ E L KG+ TI N + +GKL ++ +
Sbjct: 301 IGAGTMGGGITMNFLNAGIPVVLLEMKQEALDKGLATIRRNYENSMKKGKLKPEQVEQRM 360
Query: 371 KMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGE 430
++ G L Y++ DVD+VIEAV E++ +K+ +F L+K C ILA+NTS ++L+ +
Sbjct: 361 GLITGTLSYADLSDVDLVIEAVFENMDVKKTVFETLDKTCKAGAILASNTSYLNLDRIAS 420
Query: 431 KTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFA 490
T +IG HFFSPA+VM LLEIVR +T+ V+ M + K IKK+ VV G C GF
Sbjct: 421 FTKRPTDVIGLHFFSPANVMRLLEIVRGAQTAPDVLATCMALAKKIKKIAVVSGVCDGFI 480
Query: 491 VNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKA 550
NR Y +A L++ G +ID A++ FG+ +GP+++ DLAG + AT K A
Sbjct: 481 GNRMLARYGAAAGALINAGALPQQIDGALQKFGMAMGPYRMGDLAGLDIGYATRKR-KAA 539
Query: 551 FPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPG 609
+ + D L ++GR G+ G G Y YE G++ P PDP+ +I E R I
Sbjct: 540 EAGVPLRPSVADKLAEAGRLGQKTGAGWYRYEAGNRDPIPDPATEALIAEFRSAQGIT-- 597
Query: 610 GKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWAD 669
P +++++E+VE +F +VNE R+LEEGI RASDLD + G FP RGG + +AD
Sbjct: 598 --PRAISDEEVVERCIFALVNEGARILEEGIAARASDLDVVYLNGYGFPRLRGGPMLYAD 655
Query: 670 AVGANYVYTSLKKWS 684
VG V SL++++
Sbjct: 656 MVGLPNVVRSLRRFA 670
>gi|206559114|ref|YP_002229874.1| putative trifunctional enoyl-CoA hydratase/3,2-trans-enoyl-CoA
isomerase/3-hydroxyacyl-CoA dehydrogenase [Burkholderia
cenocepacia J2315]
gi|444370153|ref|ZP_21169838.1| enoyl-CoA hydratase/isomerase family protein [Burkholderia
cenocepacia K56-2Valvano]
gi|198035151|emb|CAR51025.1| putative trifunctional protein [includes: enoyl-CoA hydratase;
3,2-trans-enoyl-CoA isomerase; 3-hydroxyacyl-CoA
dehydrogenase] [Burkholderia cenocepacia J2315]
gi|443597878|gb|ELT66281.1| enoyl-CoA hydratase/isomerase family protein [Burkholderia
cenocepacia K56-2Valvano]
Length = 707
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 243/699 (34%), Positives = 364/699 (52%), Gaps = 24/699 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D V ++T+ +PPVNAL+ + GL D + A + D ++A+++ G G F G DI F
Sbjct: 17 RDKVLVVTIDHPPVNALSADVRRGLADAIDAAQADDAIRAVLIVGAGRNFIAGADIREFG 76
Query: 72 KVHGAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKT 129
K P V L V IE KP+V A+ G LGGGLE+A+ H R+A P
Sbjct: 77 K----------PPVPPSLPDVCERIESGTKPVVVALHGATLGGGLEVALAAHYRLAVPGA 126
Query: 130 QLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL 186
+LGLPE+TLG++PG TQR PRL+G A+++ML + ++EE LGL+D V S++
Sbjct: 127 KLGLPEVTLGLLPGAGGTQRAPRLIGAKAALDLMLTGRHASAEEALALGLVDRVAHSDDT 186
Query: 187 LKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLD 246
L +A ++ + P +R L + A+ + AR + K + + +D
Sbjct: 187 LAEGLAYAQELVSLGAP-VRRTRDAQGLADRTAAQAAIDAARAELPKKSRGLFSPAKIVD 245
Query: 247 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 306
+E + +G+ E +F + + GLVH FFA+R +K P +P V
Sbjct: 246 AVEAALTQSFDAGMKFERSLFLQCLDSPQRAGLVHAFFAEREAAKAPEARRASARP--VE 303
Query: 307 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 366
++ V+GGG MG+GIA A + + V + E + L +G +E GLV +G++T
Sbjct: 304 RIGVVGGGTMGAGIAVAALDAGLPVTMIERDEASLARGRAHVEKVYDGLVAKGRMTPAAH 363
Query: 367 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 426
L KG Y VD+VIEAV E + +KQ +F+EL + C P +LATNTS +D++
Sbjct: 364 AARLARFKGSTSYDALAQVDVVIEAVFEDMAVKQAVFAELARVCKPGAVLATNTSYLDID 423
Query: 427 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 486
+ D +IG HFFSPA+VM LLEIV R S V+ + + +KK PV G C
Sbjct: 424 ALASIDRPAD-VIGLHFFSPANVMKLLEIVVPARVSPDVVATAFALARQLKKTPVRAGVC 482
Query: 487 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKE 546
GF NR Y +A L+ G ++ID A+R FG P+GPFQ++DLAG + AT K
Sbjct: 483 DGFIGNRILAVYRTAADYLMEDGASPYQIDRAVREFGFPMGPFQVVDLAGGDIGWATRKR 542
Query: 547 FDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSN 605
+ + D L + G G+ G+G Y Y G++ PDP V I+ E R
Sbjct: 543 RAATRDPNARYVEISDRLCERGWFGQKTGRGYYLYPDGARVGTPDPEVEAIVAEERAKKG 602
Query: 606 IMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIV 665
I P + T+ EI+ L ++NE V+ E I +R D+D + G FP YRGG +
Sbjct: 603 IT----PRTFTDDEILRRYLAAMINEGANVVHEKIALRPLDVDAVFLHGYGFPRYRGGPM 658
Query: 666 FWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+AD +G V ++ +++ F+KPS L + +G
Sbjct: 659 HYADTLGLANVLADIRTFAKDDPLFWKPSPLLVDLVARG 697
>gi|393775492|ref|ZP_10363805.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Ralstonia sp. PBA]
gi|392717542|gb|EIZ05103.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Ralstonia sp. PBA]
Length = 702
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 248/692 (35%), Positives = 366/692 (52%), Gaps = 19/692 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DGV ++TL PPVNAL + L E A + V+AIVL G G FS G DI F
Sbjct: 11 QDGVLVLTLNQPPVNALGNTLRKALVQAIETAQADPQVRAIVLHGAGRGFSAGADITEF- 69
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
G P V V +IE+C KP++AA+ G+ALGGGLELA+G H RIAA T+L
Sbjct: 70 -----GQPREFPWVGD--VCTIIENCDKPVIAALHGMALGGGLELALGAHYRIAARGTKL 122
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
GLPE+ +G+IPG TQRLPRL+G + A+++ML + + +E ++GLID + T ++ L+
Sbjct: 123 GLPEVQIGLIPGGGGTQRLPRLIGAAAALDLMLSGRHASVDEAKRMGLIDRIATQDDPLE 182
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 248
+ WA +I A+ +R LG + + ++ AR + A + LD +
Sbjct: 183 EACTWASEILAQ-GGIVRRTRDAQALGDSATSLAAVEAARAGNARKARGLFAPFQILDAV 241
Query: 249 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 308
++ I +G+ E F + V GLVH FFA+R K P +PR V V
Sbjct: 242 KDAIEQPFEAGIQAERARFLQCVDSPQRAGLVHAFFAERRVRKAPETESS--QPRPVATV 299
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
VIGGG MGSGIA A + + V++ E + L G + +E L+ G++ +
Sbjct: 300 GVIGGGTMGSGIAVALLDAGLQVIMVERDDASLQAGRQRVEKVYDRLIANGRMEVARKEA 359
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
L+ G Y F D+VIEAV E + +K+ +F EL++ C P ILATNTS +D++ +
Sbjct: 360 VLQRFTGATSYDAFAQADLVIEAVFEDMDVKKAVFGELDRICKPGAILATNTSYLDIDAI 419
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
S +IG HFFSPA++M LLEIV + SA V+ + ++KVPV G C G
Sbjct: 420 AASISRPQDVIGLHFFSPANIMKLLEIVVPAKVSADVVATGFALADKLRKVPVRAGICDG 479
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR + Y + A ++ G + ID A+ FG +GPF+ DL G + AT K
Sbjct: 480 FIGNRILYVYREVASHMMEDGASPYEIDQALEEFGYAMGPFRTNDLTGGDIGYATRKRKA 539
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKP-KPDPSVLPIIEECRRLSNIM 607
+ + D L + G+ G+G Y Y +GS+ + DP VL +I+ R I
Sbjct: 540 ATRDPNARYVRIADQLCERNWLGQKTGRGWYRYPEGSRSGQHDPEVLALIDAERAERGI- 598
Query: 608 PGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFW 667
+P + + ++I+ + V+NES VL + I +R D+D V G FP +RGG + +
Sbjct: 599 ---QPRTFSSEDILRRYMAAVINESANVLHDKIALRPLDIDVTLVHGYGFPRWRGGPMHY 655
Query: 668 ADAVGANYVYTSLKKWSQLYGNFFKPSRFLEE 699
AD VG + V ++ + + F+KPS L E
Sbjct: 656 ADTVGLDKVLADIRSFEKEDPLFWKPSPLLVE 687
>gi|209516658|ref|ZP_03265511.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia sp. H160]
gi|209502933|gb|EEA02936.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia sp. H160]
Length = 706
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 237/701 (33%), Positives = 373/701 (53%), Gaps = 23/701 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
V ++T+ + PVNAL+ + GL E A + V+A+++ G G F G DI F K
Sbjct: 18 VLLVTIDHAPVNALSADVRRGLLAAIEAADADQAVQAVLIVGAGRNFIAGADIREFGK-- 75
Query: 75 GAGDVSLMPDV--SVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
P V S+ V N IE C KP+VAA+ G ALGGGLE+A+ H RIA +LG
Sbjct: 76 --------PPVPPSLPEVCNRIEACTKPVVAAIHGAALGGGLEVALAAHYRIAVDGAKLG 127
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 189
LPE+ LG++PG TQR PRL+G A++++L + +++E G+ID + S ++L
Sbjct: 128 LPEVQLGLLPGAGGTQRTPRLIGAQAALDLILSGRHASAKEALAFGMIDRLGDSGDILAE 187
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
+ ++ A P +R L + + + AR + K A + +D +E
Sbjct: 188 GLAYVHELLAAHAP-VRRTREATALTDRAASLAAVATAREETAKKARGLFSPLKIVDAVE 246
Query: 250 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 309
I G+ E K+F + + GL+H FFA+R K P D KPR + +
Sbjct: 247 AAIEQPFDEGLKLERKLFLQCLDSPQRAGLIHAFFAEREVLKAPETRDA--KPRALDAIG 304
Query: 310 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 369
V+GGG MG+GIA A + + V + E + L +G I+ GL+ +G+LT ++
Sbjct: 305 VVGGGTMGAGIAVAVLDAGLPVTMIERDEASLARGRAHIDKVYDGLIAKGRLTAERKAAI 364
Query: 370 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 429
+ G Y VD+VIEAV E + +K+ +F EL++ C P +LATNTS +D++ +
Sbjct: 365 MAGWSGSTSYDALAHVDLVIEAVFEDLDVKKAVFVELDRVCKPGAVLATNTSYLDIDAIA 424
Query: 430 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 489
S +IG HFFSPA++M LLE+V ++ SA V+ + K ++K PV G C GF
Sbjct: 425 ASVSRPADVIGLHFFSPANLMKLLEVVVPKQVSADVVATAFELAKKLRKTPVRAGVCDGF 484
Query: 490 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDK 549
NR Y +A L G ++ID+A+R+FG P+GPFQ++DLAG + A K
Sbjct: 485 IGNRLLAVYRAAADALTEDGASPYQIDAAVRAFGFPMGPFQVVDLAGGDIGWAARKRRAA 544
Query: 550 AFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIMP 608
+ + D L + G G+ G+G Y Y +GS+ PDP V II+ R+ + I P
Sbjct: 545 TRNPNARYVQIADRLCERGWFGQKTGRGFYLYPEGSRGGTPDPEVEAIIDAERKRAGITP 604
Query: 609 GGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWA 668
S +++EI+ + ++NE V+ EGI +R D+D + G FP YRGG + +A
Sbjct: 605 R----SFSDEEIMRRYMAAMINEGANVVHEGIALRPLDVDVTLLYGYGFPRYRGGPMKYA 660
Query: 669 DAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSA 709
D+VG + ++++++ F++PS L + +G+ ++
Sbjct: 661 DSVGLPTILADIREFAKEDPLFWRPSPLLIDLVERGVDFAS 701
>gi|332286481|ref|YP_004418392.1| fatty oxidation complex subunit alpha [Pusillimonas sp. T7-7]
gi|330430434|gb|AEC21768.1| fatty oxidation complex, alpha subunit [Pusillimonas sp. T7-7]
Length = 696
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 250/709 (35%), Positives = 383/709 (54%), Gaps = 32/709 (4%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
V+ + ND +A+IT+ NPPVNAL+ + +GLK + VKA+VL G FS G
Sbjct: 5 VSFALRND-IALITIENPPVNALSQAVRSGLKAAITQGEQDSRVKAMVLICAGRSFSAGA 63
Query: 66 DINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA 125
DI+ F K + VE V+ IE KPIVAA+ G ALGGGLE+A+GCH RIA
Sbjct: 64 DIHEFGK-------PPQEPLLVE-VIEEIEQASKPIVAAIHGTALGGGLEVALGCHFRIA 115
Query: 126 APKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 182
+ ++GLPE+ LG++PG TQRLPRL+G+ A+E+++ +++E +LGLID V
Sbjct: 116 SMDAKMGLPEVKLGLLPGAGGTQRLPRLIGVPAALELIVDGGMVSAERALELGLIDERVV 175
Query: 183 SEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVL--KLARLQAKKTAPNMPQ 240
S +L + +A + P +R L D S S+ E + R + AP
Sbjct: 176 SGKLEAAALDFARGVIDSSMP-VRRLSTLDCSFSDSDVFEAYTESVTRKRRGYIAP---- 230
Query: 241 HQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGL 300
C+ ++ G+ +E +F EL S+ H FFA+RA ++VP+ T L
Sbjct: 231 -LRCIAAVQAAAELPFAKGMERERAMFLELAASFQSKAQRHAFFAERAAARVPDAT---L 286
Query: 301 KPR----GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
K V V V+G G MG+GIA I V+L E N++ L +G+ TI N +
Sbjct: 287 KKETEVLSVDSVGVVGAGTMGTGIAMCFANVGIPVLLLETNADNLERGVATIRKNYARTM 346
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
RG LTQ + + + +++ Y + VD+VIEAV E + +KQ +F L++ C P IL
Sbjct: 347 DRGGLTQAEMDRRIALIRPSAVYEDLAQVDLVIEAVFEELGVKQMVFRMLDQVCKPGAIL 406
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS ++++ + + T+ + ++G HFFSPA+VMPLLE VR +T QV M VGK+I
Sbjct: 407 ASNTSYLNIDAIADVTARPEYVLGMHFFSPANVMPLLENVRGAKTLPQVCAAAMKVGKVI 466
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K PV+V C GF NR ++ + ++ G +ID + FG P+GPF + DLAG
Sbjct: 467 GKTPVMVRVCDGFVGNRMLAKRTRESYFMLEEGATPQQIDRVLYDFGFPMGPFAMSDLAG 526
Query: 537 YGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPI 596
V + R ++D + GR G+ G G Y YE+ DP + +
Sbjct: 527 VDVGWLNRQSRLANLTSRERACDILDQVHALGRFGQKTGAGFYRYEEDRSRHVDPKIEEL 586
Query: 597 IEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMS 656
I + I + + + EI+E L+P++NE+ ++LEEGIV R D+D + G
Sbjct: 587 IVNHSKKRGI----ERRQIPDSEIIERCLYPMINEAAKLLEEGIVDRPGDIDVVWLKGYG 642
Query: 657 FPSYRGGIVFWADAVGANYVYTSLKKWSQLYG-NFFKPSRFLEERATKG 704
FP++ GG +F+AD +G ++ ++ K+ ++G ++KP+ LE+ G
Sbjct: 643 FPAFLGGPLFYADHIGLPVIHQAMLKYQAVHGEQYWKPAALLEDLVRSG 691
>gi|344282369|ref|XP_003412946.1| PREDICTED: peroxisomal bifunctional enzyme-like [Loxodonta
africana]
Length = 723
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 245/723 (33%), Positives = 387/723 (53%), Gaps = 51/723 (7%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D VA I L NPPVNA++ ++ G+K+ ++A VKAIV+ G G FS G DI+ F
Sbjct: 8 RDYVARIRLRNPPVNAISKAVIYGIKEGLQKAVGDHRVKAIVICGADGHFSAGADISSFS 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ D+SL P +V+ I+ +KP+VAA++G+ALGGGLE+A+GCH RIA + +
Sbjct: 68 APRSS-DLSLGP------LVDDIQRSEKPVVAAIQGVALGGGLEVALGCHYRIAHTEAHI 120
Query: 132 GLPELTLGVIP---GTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS---EE 185
GLPE+TLG++P GTQ LPRL+G+ A++++ + + + E KLG++D VV S EE
Sbjct: 121 GLPEVTLGILPAARGTQLLPRLIGVPAALDLITSGRHVPAYEALKLGIVDEVVNSDPVEE 180
Query: 186 LLKVS-RLWALDIAARR---KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 241
+K++ R+ + +RR KP ++SL D + A L+ +K P
Sbjct: 181 AIKLAQRVLDQPLESRRLCNKP-VQSLPNMDA---------IFNEALLKMRKQYPGCLSR 230
Query: 242 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 301
+ C+ ++ + + G+ KE ++F L +R L + FFA++ +K + K
Sbjct: 231 ETCVLGVQAAVCYPYEVGIKKEEELFMYLRESGQARALQYAFFAEKVANKWSIPSGASWK 290
Query: 302 ---PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTR 358
R + V V+G G MG GI + I V+ E + + L K I + + +
Sbjct: 291 TASARPISSVGVLGLGTMGKGIVISLARARIPVIGVESDKQQLETANKVINSFLEKEAS- 349
Query: 359 GKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 418
K+ QD ++ + E VD+VIEAV E + LK+K+F+EL C P L T
Sbjct: 350 -KMQQDGHPWSIPKPRLTTSMKELGGVDLVIEAVFEEMSLKKKVFAELSAICKPETFLCT 408
Query: 419 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKK 478
NTS +D++ + +IGAHFFSPA VM LLE++ + TS + +M++ K +KK
Sbjct: 409 NTSALDIDKIASAADRPHLVIGAHFFSPAQVMTLLEVIPGKYTSPTTVATVMSLAKKMKK 468
Query: 479 VPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYG 538
+ VVVGNC F NR PY + L+ G +D + FG +GPF+ DL+G
Sbjct: 469 IGVVVGNCFAFVGNRMLAPYYNQSYFLLEEGSKPEEVDRVLEEFGFKMGPFRTSDLSGLD 528
Query: 539 VAAATSKEFDKAFPDRSFQS-----------PLVDLLLKSGRNGKANGKGLYTYEK--GS 585
V + KE P+ ++ P+ D+L + GR G+ GKG Y Y+K G
Sbjct: 529 VGWRSRKEQGLTGPELPPRTPARKRGDVRYCPIPDMLCELGRFGQKTGKGWYQYDKPLGR 588
Query: 586 KPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRAS 645
KPDP + + + R +I +P +++++EI+E L+ ++NE R+L EGI R
Sbjct: 589 IYKPDPWLANFLSQYRETQHI----EPRTISQEEILERCLYSLINEGFRILGEGIAARPE 644
Query: 646 DLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF--FKPSRFLEERATK 703
+D + G ++P + GG +F+A VG V L+K+SQ + +PS +L++ A+
Sbjct: 645 HIDVIYLHGYAWPRHTGGPMFYASTVGLPIVLEKLQKYSQQNPDIPQLEPSDYLKKLASL 704
Query: 704 GIP 706
G P
Sbjct: 705 GNP 707
>gi|254463027|ref|ZP_05076443.1| peroxisomal bifunctional enzyme [Rhodobacterales bacterium
HTCC2083]
gi|206679616|gb|EDZ44103.1| peroxisomal bifunctional enzyme [Rhodobacteraceae bacterium
HTCC2083]
Length = 711
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 240/699 (34%), Positives = 367/699 (52%), Gaps = 36/699 (5%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A++ NPPVNAL + +GL E A S + KA+++ G G + G DI F K
Sbjct: 28 IAVLRANNPPVNALGHAVRSGLIAGLERAES--EAKAVLIVGAGRTYFAGADIKEFGKP- 84
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
+ + + V IE P+++A+ G ALGGGLE+A+G H RIA P ++GLP
Sbjct: 85 -------LLEPGLPGVCTRIERSPLPVISAIHGTALGGGLEVALGTHYRIAVPSAKVGLP 137
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE----ELL 187
E+ LG++PG TQRLPRLVG KAIEM+ + +++ E +LG++D V E L
Sbjct: 138 EVHLGILPGAGGTQRLPRLVGADKAIEMITSGRHVSAPEALELGILDEVEEGEVEAIGLA 197
Query: 188 KVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDV 247
R+ LD +P + + R + + + +K R Q AC
Sbjct: 198 YAQRI--LDAGLGPRP-VGQMPRPEVVDFDTAYEAAMKRGRGQIAPATAIRSIEGACHKG 254
Query: 248 IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRK 307
I+ G+ H E +F L+ G+VH FF +RA SK+P + G+ PR V
Sbjct: 255 IDAGLEH--------ERNLFMALLNSPQREGMVHAFFNERAVSKLPELK--GVAPREVSA 304
Query: 308 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 367
+ VIGGG MG+GIA A +L+ + V + E +++ G + + ++G V RGKLT +K +
Sbjct: 305 IGVIGGGTMGAGIAVAALLSGLDVTMIERDADAAKAGAERVSDILQGSVKRGKLTNEKFD 364
Query: 368 NALK-MLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 426
+ + Y D D+VIEA E + +K+ IF+EL++ C +LA+NTS +D+N
Sbjct: 365 AIMAGRFRASDSYEALGDADLVIEAAFEEMGVKKTIFAELDRVCKKGAVLASNTSYLDVN 424
Query: 427 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 486
+ TS ++G HFFSPAHVM LLEIV T+ V+ +GK+++K+ V G C
Sbjct: 425 EIAASTSRPADVLGLHFFSPAHVMKLLEIVVAADTAPDVVATGFALGKMMRKIAVRSGVC 484
Query: 487 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKE 546
GF NR Y A +V G F ID+A+ +FG +GPF++ DLAG + AT K
Sbjct: 485 DGFIGNRILKTYRTCADHMVLDGASPFEIDTAMTAFGFAMGPFEVADLAGLDIGWATRKR 544
Query: 547 FDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSN 605
R + D + ++G G+ G+G Y YEKG + PD +V +IE RR
Sbjct: 545 LAPTRDARERVATYADKMCEAGHFGQKTGQGYYVYEKGKRGGTPDVNVTALIEAERRELG 604
Query: 606 IMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIV 665
I P + ++ EI + +VNE+ +V+ EGI R D+D + G FP + GG +
Sbjct: 605 IT----PRAFSQDEIQRRYMCAMVNEAAKVVGEGIARRPLDVDMVLLFGYGFPRHWGGPL 660
Query: 666 FWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
WAD G + + ++ +++ F++P++ LE G
Sbjct: 661 KWADLQGLDGILADIQSYAKEDDFFWQPAQLLERLVAAG 699
>gi|414176191|ref|ZP_11430420.1| hypothetical protein HMPREF9695_04066 [Afipia broomeae ATCC 49717]
gi|410886344|gb|EKS34156.1| hypothetical protein HMPREF9695_04066 [Afipia broomeae ATCC 49717]
Length = 696
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 250/698 (35%), Positives = 379/698 (54%), Gaps = 28/698 (4%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
D VAI+ + +PPVNAL+ + G+ D + A + VKAIV+ G F G DI F K
Sbjct: 11 DAVAIVIVNSPPVNALSAAVRKGIADGVKSAEADASVKAIVIACAGRTFIAGADITEFGK 70
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ S+ V+ +IE+ KP+VAA+ G ALGGGLELA+G H R+A +LG
Sbjct: 71 PPQS--------PSLHEVIEVIENSSKPVVAAIHGTALGGGLELALGAHFRVATKDAKLG 122
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 189
LPE+ LG++PG TQRLPR VG A++M++ I + + K GLID VV E +
Sbjct: 123 LPEVKLGLLPGAGGTQRLPRAVGPELAVKMIVGGDPIGAADALKNGLIDEVVEGEPAVG- 181
Query: 190 SRLWALDIAARRKPWIRSLHRTD-KLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 248
+A + A ++P +R L D KL + + + A A K + A + +
Sbjct: 182 GEAFARKVLAEKRP-LRKLRDDDSKLAAAKADKSIFTNAAAAANKRNRGLEAPLAAAEAV 240
Query: 249 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 308
+ + E +F +L+ D S+ + FFA+R +KV V + G KPR V++V
Sbjct: 241 SHSLDQPFDQALKSERDLFIKLMNGDQSKAQRYAFFAEREAAKVSGVPE-GTKPRDVKQV 299
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
A+IG G MG GIA + I V L E E L +G+ ++ N RG + D
Sbjct: 300 AIIGAGTMGGGIAMSFANAGIPVTLIETGGEQLKRGLGVMQKNYEATAARGGIPADAPAK 359
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
+ ++KGV+ KD D++IEAV E++ +K+ +F +L++ P +LATNTS +D+N +
Sbjct: 360 RMGLIKGVVGIENVKDADLIIEAVFETMAIKKDVFGKLDQFAKPGAVLATNTSYLDINQI 419
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
T ++G HFFSPA+VM L EIVR E+T+ ++ + V K I KVPVVVG C G
Sbjct: 420 AAMTKRPQDVLGMHFFSPANVMKLCEIVRGEKTAPDALMTAVAVAKRIAKVPVVVGVCDG 479
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR + A + G ++D+ + FG+P+GPF + DLAG + + +
Sbjct: 480 FVGNRMLAARGKQAEKFLFEGALPQQVDAVLTKFGMPMGPFAMGDLAGLDIGWRSRQ--- 536
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIM 607
DR +S + D + ++GR G+ GKG Y YE GS+ P PDP + +IEE +
Sbjct: 537 ----DRGIKSEIADAICEAGRFGQKTGKGYYKYEAGSRSPLPDPEIEKLIEE----TTAK 588
Query: 608 PGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFW 667
G K + ++EI+E +++P++NE R+LEE I R SD+D + G +P YRGG +F+
Sbjct: 589 LGLKRRQIDDQEILERLMYPMINEGARILEEKIAARPSDIDVVWLYGYGWPIYRGGPMFY 648
Query: 668 ADAVGANYVYTSLKKWS-QLYGNFFKPSRFLEERATKG 704
AD VG + L ++ Q +P+ L+ A +G
Sbjct: 649 ADQVGLKTIAERLSFYAKQTNDPSLEPTPLLKRLADEG 686
>gi|338972995|ref|ZP_08628365.1| enoyl-CoA hydratase [Bradyrhizobiaceae bacterium SG-6C]
gi|338233748|gb|EGP08868.1| enoyl-CoA hydratase [Bradyrhizobiaceae bacterium SG-6C]
Length = 695
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 244/698 (34%), Positives = 386/698 (55%), Gaps = 26/698 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+D +AI+T+ +PPVNAL+ + G+ + + A + D VKAIV+ G F G DI F
Sbjct: 10 HDAIAIVTIDSPPVNALSAAVRKGIAEGVKSAQADDSVKAIVIACAGRTFVAGADITEFG 69
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K + S+ V+ IE+ KP+VAA+ G ALGGGLELA+GCH R+A +L
Sbjct: 70 KPPQS--------PSLHEVIETIENSSKPVVAAIHGTALGGGLELALGCHYRVAVKDAKL 121
Query: 132 GLPEL---TLGVIPGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
GLPE+ L GTQRLPR VG A++M++ + I++++ K GLI+ +V + +
Sbjct: 122 GLPEVKLGLLPGGGGTQRLPRAVGPELAVKMIVGGEPISAQDALKNGLIEEIVDAPPAVG 181
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 248
+A I A ++P R KL + R + A A K + + + +
Sbjct: 182 -GESFARKIVAEKRPLRRLRDDDSKLAAAKADRSIFTNAAAAANKRSRGLEAPVTAAEAV 240
Query: 249 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 308
+ + E ++F +L+ D S+ + FFA+RA +K+ V D G K R V++V
Sbjct: 241 SHSLDQPFDQALKTERELFLKLMNGDQSKAQRYAFFAERAAAKIDGVPD-GTKGREVKQV 299
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
AVIG G MG GIA + I V + E+ E L +G+ ++ N RG + D
Sbjct: 300 AVIGAGTMGGGIAMSFANAGIPVTIIEMADEPLKRGLGIMQKNYEATAARGGIPADAPAK 359
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
+ ++KG + KD D++IEAV E++ +K+++F++L++ P +LA+NTS +D+N +
Sbjct: 360 RMGLIKGAVGLENVKDADLIIEAVFETMEIKKEVFTKLDQFAKPGAVLASNTSYLDINKI 419
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
+ T ++G HFFSPA+VM L EIVR +T+ ++ + + K I KVPVVVG C G
Sbjct: 420 ADVTKRPQDVLGMHFFSPANVMKLCEIVRGAKTAPDALVTAVNIAKKIAKVPVVVGVCDG 479
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR S+ + + G ++D+ + FG+P+GPF + DLAG + + K
Sbjct: 480 FVGNRMLAARSKQSEKFLFEGALPQQVDAVVTKFGMPMGPFAMGDLAGLDIGWRSRK--- 536
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIM 607
DR +S + D L ++GR G+ GKG Y YE+GS+ P PDP V +I+E L+ +
Sbjct: 537 ----DRGIKSEIADALCEAGRFGQKTGKGYYRYEQGSRSPLPDPEVEKLIDET--LAKL- 589
Query: 608 PGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFW 667
G K ++++EI+E +++P++NE R+LEE I R SD+D + G +P YRGG +F+
Sbjct: 590 -GLKRREISDEEILERMVYPMINEGARILEEKIAARPSDIDVVWLYGYGWPIYRGGPMFY 648
Query: 668 ADAVGANYVYTSLKKWS-QLYGNFFKPSRFLEERATKG 704
AD VG + L ++ Q +P+ L+ A +G
Sbjct: 649 ADQVGLKKIADRLSFYAKQTNDPSLEPAPLLKRLADEG 686
>gi|449475201|ref|XP_004154403.1| PREDICTED: glyoxysomal fatty acid beta-oxidation multifunctional
protein MFP-a-like, partial [Cucumis sativus]
Length = 444
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/322 (57%), Positives = 245/322 (76%), Gaps = 3/322 (0%)
Query: 85 VSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG- 143
+S++++ ++ E +KP VAA++GLALGGGLE+AM CHAR++ QLGLPEL LG+IPG
Sbjct: 94 ISIDVITDIFEAARKPAVAAIDGLALGGGLEVAMACHARLSTKTAQLGLPELQLGLIPGF 153
Query: 144 --TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARR 201
TQRLPRLVGL KA+EMML SK + EE + LGL+DA+V EEL+ +R WALDI+ RR
Sbjct: 154 GGTQRLPRLVGLPKALEMMLTSKPVKGEEAFSLGLVDAIVPREELISAARKWALDISERR 213
Query: 202 KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVL 261
KPWI SLH+T+KL SL++ARE+ K AR Q +K APN+ C+DV+E G+V G +G+
Sbjct: 214 KPWIISLHKTNKLESLADAREIFKFARAQVRKQAPNLKHPLVCIDVVETGVVSGPRAGLQ 273
Query: 262 KEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIA 321
KE + F+ L+ DTS+ L+HVFFAQR T+KVP V+D+GL PR + KVAVIGGGLMGSGIA
Sbjct: 274 KEIEDFQVLLHADTSKSLIHVFFAQRGTTKVPGVSDLGLTPRRINKVAVIGGGLMGSGIA 333
Query: 322 TAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE 381
TA IL+N V+LKEVN ++L G+ ++AN++ V +G +T +K + +LKGVLDY
Sbjct: 334 TALILSNYPVILKEVNEKFLEAGLGRVKANLQSRVRKGTMTPEKFERTISLLKGVLDYES 393
Query: 382 FKDVDMVIEAVIESVPLKQKIF 403
FKDVDMVIEAVIE++ LKQ+I
Sbjct: 394 FKDVDMVIEAVIENISLKQQII 415
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/44 (70%), Positives = 37/44 (84%)
Query: 100 PIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG 143
P VAA++GLALGGGLE+AM CHAR++ QLGLPEL LG+IPG
Sbjct: 2 PAVAAIDGLALGGGLEVAMACHARLSTKTAQLGLPELQLGLIPG 45
>gi|393725326|ref|ZP_10345253.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingomonas sp. PAMC 26605]
Length = 677
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 245/711 (34%), Positives = 373/711 (52%), Gaps = 46/711 (6%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR 60
M +P +T E+ +D + II+ NPPVNAL + GL+ ++ + VKA+V+ +G
Sbjct: 1 MTSP-ITTELHDDILVIISN-NPPVNALGAAVRQGLEAGIKQGLADPQVKAMVIRCDGRT 58
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
F G DI F K M + + VV++IE KP+VAA+ G ALGGG E+ +GC
Sbjct: 59 FFAGADITEFGKP--------MQEPGLPTVVDMIEASDKPVVAAIHGTALGGGCEVTLGC 110
Query: 121 HARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 177
H RIA P ++G PE+ LG++PG TQR+PR+ G+ A+EM I ++ GLI
Sbjct: 111 HYRIAVPSAKIGTPEVKLGLLPGAGGTQRIPRIAGVKLALEMTAKGDPIPAKLALSAGLI 170
Query: 178 DAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKK---- 233
D + + L + +A +IA R L R + + ++ V + AK+
Sbjct: 171 DRLAGEDSLEADAIAFAREIAD-----ARPLPRAREKVAQADPEAVAAFKKDNAKRFRGF 225
Query: 234 TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 293
AP + AC++ +G G+ E + F +L+M S H+FFA+R +K+
Sbjct: 226 DAP--AANIACVEKAADGSSFD--EGIAFERQEFMKLMMGVQSAAQRHIFFAERQAAKID 281
Query: 294 NVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVR 353
+ D ++ R +++V VIG G MG GI+ + I V + E+ E L +G TI N
Sbjct: 282 GI-DANIQLREIKRVGVIGAGTMGGGISMNFLSAGIPVTIVEMAQEALDRGAGTIRKNYE 340
Query: 354 GLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPH 413
+G+L ++ A+ L LD+ + D++IEAV E++ +K+ IF+ L+ P
Sbjct: 341 ASAAKGRLKSEQVEAAMGALNPTLDFEALAECDLIIEAVYENMEVKKDIFTRLDAIAKPG 400
Query: 414 CILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVG 473
ILA+NTS +D++ + T ++G HFFSPA+VM LLE+VR +T V+ +M +
Sbjct: 401 AILASNTSYLDIDEIASVTKRPGDVVGMHFFSPANVMKLLEVVRGAQTDDDVLATVMALS 460
Query: 474 KIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLD 533
K IKKV VV G C GF NR P A L+ G +ID +FG+P+GPFQ+ D
Sbjct: 461 KTIKKVAVVAGVCDGFIGNRMLKPRQVEAMKLLMEGATPEQIDRVHVAFGMPMGPFQMSD 520
Query: 534 LAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSV 593
LAG + P+R + D L GR G+ KG Y Y++ P P P V
Sbjct: 521 LAGVDIGWHRD-------PNRI--ENIRDALAAEGRWGQKTAKGFYDYDEKRNPTPSPRV 571
Query: 594 LPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVL 653
IIE+ R SN+ + ++++EIVE L+ +VNE +LEE + RASD+D +
Sbjct: 572 AEIIEDFRSKSNM----QKREISDQEIVEKTLYTMVNEGALILEEKMAQRASDIDVVWIY 627
Query: 654 GMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
G +P YRGG +FWAD G + L+K + F + L+ +A G
Sbjct: 628 GYGWPVYRGGPMFWADTEGLKTIVAGLEK------HGFAVAELLKSKAESG 672
>gi|358637346|dbj|BAL24643.1| 3-hydroxyacyl-CoA dehydrogenase [Azoarcus sp. KH32C]
Length = 672
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 230/668 (34%), Positives = 352/668 (52%), Gaps = 32/668 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A+ T+ NPPVNAL++ + GL + + + D V+A+V+ G G F G DIN F K +
Sbjct: 12 IAVATVNNPPVNALSLGVRQGLMQAIDASHADDSVRALVIIGGGSTFVAGADINDFGKPY 71
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
+ S+ +++ + KP++AA+ G A GGGLELA+ C RIA+P Q+G P
Sbjct: 72 --------EEPSLYAIIDALMASPKPVIAAIHGTAFGGGLELALACQWRIASPDAQIGQP 123
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 191
E+ LG++PG TQ PRL G + A+E+ + + + + G+ID + + LL+ +
Sbjct: 124 EVKLGLMPGGGGTQWWPRLAGPAVALEVATSGNPVAARQAHEWGVIDRIADGK-LLEDAL 182
Query: 192 LWALDIAARRKPWIRSLHRTDKLGS-----LSEAREVLKLARLQAKKTAPNMPQHQACLD 246
A D+ + P R TDK+ E R+ K AR + AP +D
Sbjct: 183 AMAQDVVSGALPARRLSESTDKIRDVDPALFDEFRK--KNARKWKGQLAP-----WKIVD 235
Query: 247 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 306
+E G E F+E SR L+H+FFA+RA K+ +VT P V
Sbjct: 236 CVEAACRLSFDEGFRMEKDAFRECEHSHQSRALIHLFFAERAAGKLSDVT---AAPMPVA 292
Query: 307 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 366
+ V+G G MG+GIA + + V L + + E L +G+KTI N V+RG + Q +A
Sbjct: 293 SIGVVGAGTMGAGIAMSFANAGLPVTLLDTSEEGLARGMKTITGNYATSVSRGSMPQARA 352
Query: 367 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 426
+ AL + D + + D+++EAV E + +KQ +F L+ P ILATNTST+D++
Sbjct: 353 DAALARITATTDDAALAEADLIVEAVFEDMAIKQSVFRRLDAVAKPGAILATNTSTLDVD 412
Query: 427 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 486
+ TS + ++G HFFSPA+VM LLE+VR RT A + M V + ++K+ VV GN
Sbjct: 413 AIAAVTSRPESVLGLHFFSPANVMRLLEVVRGPRTGAATLATAMAVARKLRKIAVVSGNA 472
Query: 487 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKE 546
GF NR Y + A L+ G ++ID + FG P+G F + D+AG V ++
Sbjct: 473 YGFIGNRILAAYGREADFLLEEGATPWQIDRVLTEFGFPMGLFAMRDMAGLDVIWRIRQQ 532
Query: 547 FDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNI 606
+ P SP+ D + + GR G+ G+G Y Y+ G P PDP + +I I
Sbjct: 533 ENLTRPADERYSPIADRICEMGRFGQKTGRGYYLYD-GRTPIPDPEIENLIVGVSAELGI 591
Query: 607 MPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVF 666
P + EI++ +L + NE +LEEG+ +RA D+D V G FP+ RGG ++
Sbjct: 592 ARRDIP----DAEILQRLLSAMANEGAHILEEGVALRAGDIDVVYVNGYGFPATRGGPMW 647
Query: 667 WADAVGAN 674
WA VG +
Sbjct: 648 WAREVGPD 655
>gi|449473562|ref|XP_004153917.1| PREDICTED: glyoxysomal fatty acid beta-oxidation multifunctional
protein MFP-a-like, partial [Cucumis sativus]
Length = 415
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/322 (56%), Positives = 244/322 (75%), Gaps = 3/322 (0%)
Query: 85 VSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG- 143
+S++++ ++ E +KP VAA++GLALGGGLE+AM CHAR++ QLGLPEL LG+ PG
Sbjct: 8 ISIDVITDIFEAARKPAVAAIDGLALGGGLEVAMACHARLSTKTAQLGLPELQLGLFPGF 67
Query: 144 --TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARR 201
TQRLPRLVGL KA+EMML SK + EE + LGL+DA+V EEL+ +R WALDI+ RR
Sbjct: 68 GGTQRLPRLVGLPKALEMMLTSKPVKGEEAFSLGLVDAIVPREELISAARKWALDISERR 127
Query: 202 KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVL 261
KPWI SLH+T+KL SL++ARE+ K AR Q +K APN+ C+DV+E G+V G +G+
Sbjct: 128 KPWIISLHKTNKLESLADAREIFKFARAQVRKQAPNLKHPLVCIDVVETGVVSGPRAGLQ 187
Query: 262 KEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIA 321
KE + F+ L+ DTS+ L+HVFFAQR T+KVP V+D+GL PR + KVAVIGGGLMGSGIA
Sbjct: 188 KEIEDFQVLLHADTSKSLIHVFFAQRGTTKVPGVSDLGLTPRRINKVAVIGGGLMGSGIA 247
Query: 322 TAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE 381
TA IL+N V+LKEVN ++L G+ ++AN++ V +G +T +K + +LKGVLDY
Sbjct: 248 TALILSNYPVILKEVNEKFLEAGLGRVKANLQSRVRKGTMTPEKFERTISLLKGVLDYES 307
Query: 382 FKDVDMVIEAVIESVPLKQKIF 403
F+DVDMVIEAVIE++ LKQ+I
Sbjct: 308 FEDVDMVIEAVIENISLKQQII 329
>gi|413961192|ref|ZP_11400421.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia sp. SJ98]
gi|413931906|gb|EKS71192.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia sp. SJ98]
Length = 709
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 241/695 (34%), Positives = 364/695 (52%), Gaps = 21/695 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
V ++T+ + PVNAL + GL D E A + V+A+++ G G F G DI F
Sbjct: 21 VLVVTIDHAPVNALNAAVRRGLIDAIEAADADASVRAVLIVGAGRNFIAGADIREF---- 76
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G ++ P S+ V N IE C+KP+VAA+ G ALGGGLE+A+ H RIA +LGLP
Sbjct: 77 --GKPAVPP--SLPEVCNRIERCEKPVVAAIHGAALGGGLEVALASHYRIAVAGAKLGLP 132
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 191
E+ LG++PG TQR RL+G A+ MML I +EE +LGL+D V S+++
Sbjct: 133 EVQLGLLPGAGGTQRSARLIGAQAALSMMLSGHHIGAEEALRLGLVDRVGQSDDVFAEGL 192
Query: 192 LWALD-IAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 250
+A + IA + P R L + + AR + +K + + +D +E
Sbjct: 193 AFAHELIATKAAP--RRTKNARGLADKEASVAAIAAARAETQKKSRGLLSPLKIVDCVEA 250
Query: 251 GIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAV 310
+ G+ E + F E GLVH FF +R T K P D +PR + ++ V
Sbjct: 251 ALNLPFDEGLRFEREQFLECRESPQRAGLVHAFFVERETQKSPETRDA--QPRALDRIGV 308
Query: 311 IGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNAL 370
IGGG MG+GIA A + + V + E + L +G +E L+ +G+LT + AL
Sbjct: 309 IGGGTMGAGIAVALLDAGLAVTMIERDEASLERGSAHVEKVYDALIAKGRLTHESKTRAL 368
Query: 371 KMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGE 430
+ G Y D D+VIEAV E + K+ +F++L++ C P +LATNTS +D++ +
Sbjct: 369 QRFHGDTKYDALADADLVIEAVFEDMAAKKAVFAQLDRVCKPGAVLATNTSYLDIDEIAA 428
Query: 431 KTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFA 490
S ++G HFFSPA++M LLE+V R SA V+ + K +KKV V G C GF
Sbjct: 429 SISRPQDVLGLHFFSPANIMKLLEVVVPARVSADVVATGFELAKKLKKVAVRAGVCDGFI 488
Query: 491 VNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKA 550
NR Y +A L+ G ++ID A+R FG P+GP+Q++DLAG + A K
Sbjct: 489 GNRMLAVYRAAADHLMEDGASPYQIDRAVRDFGFPMGPYQVIDLAGGDIGWAARKRRAAT 548
Query: 551 FPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKP-KPDPSVLPIIEECRRLSNIMPG 609
+ + D L + G G+ G+G Y YE G++ PD V II+ R + +
Sbjct: 549 RDPNARYVRIGDELCERGWFGQKTGRGFYRYEDGARTGTPDAEVESIIDAERERAGV--- 605
Query: 610 GKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWAD 669
KP T+++IV L ++NE ++ EGI R D+D + G FP YRGG + +AD
Sbjct: 606 -KPRPFTDEQIVRRYLAAMINEGANIVHEGIAQRPLDVDATLMHGFGFPRYRGGPMHYAD 664
Query: 670 AVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
VG + V ++ ++Q F++ S + + +G
Sbjct: 665 TVGLDNVLADIRAFAQEDPLFWRASPLIVDLVARG 699
>gi|77458979|ref|YP_348485.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Pseudomonas fluorescens Pf0-1]
gi|77382982|gb|ABA74495.1| 3-hydroxyacyl-CoA dehydrogenase [Pseudomonas fluorescens Pf0-1]
Length = 703
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 242/706 (34%), Positives = 375/706 (53%), Gaps = 34/706 (4%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DG+A+I L PVNAL + A L D E A + V A++L G G FS G DI F
Sbjct: 11 DGLALIGLDRAPVNALDQTLRAALIDACERAATDIAVGAVILYGVQGLFSAGTDIKEF-- 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
G + + + ++ + KP++AA+ ALGGGLELA+ C RI AP +LG
Sbjct: 69 ----GTEACFAEPDLPGILTRLSALHKPLIAAIGTFALGGGLELALACGYRIGAPDARLG 124
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS-EELLK 188
L E+ LG++PG TQRLPRL+G A+ ++L + I +E LG++D + +S E+LL+
Sbjct: 125 LSEINLGLMPGAGGTQRLPRLIGAESALNLILSGEQIDAERARMLGILDRISSSTEQLLE 184
Query: 189 VSRLWA---LDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM---PQHQ 242
+R +A ++ A +P + + L AR ++ + AP +
Sbjct: 185 EARAYANELIECCAPARPAEAWPNPAEDLPDDFLARYRVEHEPRWKSRLAPRLVLSALEA 244
Query: 243 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 302
ACL +EEG+V +E +FK+ S+ L HVFFA++ + P + D
Sbjct: 245 ACLLPLEEGLV--------RELTLFKQAEASRQSKALRHVFFAEQDARRTPRI-DTADPS 295
Query: 303 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 362
R + KVAVIG G +G GIA + I V L +++ L +G+K + N + V RGKL+
Sbjct: 296 RKINKVAVIGAGTLGGGIAMSFADVGIPVALMDLDGRTLDRGLKRVRENYQLSVKRGKLS 355
Query: 363 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 422
+ +++L G LDY++ D D++IEAV E + K ++F LE C P ILATNTS+
Sbjct: 356 AVQMQQRMELLFGTLDYADLSDADLIIEAVCEKMESKHQVFLALESVCKPGAILATNTSS 415
Query: 423 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 482
+D++ + + S +IG HFFSPA+VM L+EIV + T+ V+ +M + + I K+PV+
Sbjct: 416 LDIDALAKMVSRPQDVIGMHFFSPANVMRLVEIVLCQTTAPDVVTAVMDIARRIGKLPVI 475
Query: 483 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAA 542
GN G NR PY++ A LV G ++D+ + S L +G F +LDLAG V+
Sbjct: 476 SGNSAGSIGNRMLEPYAREAHRLVLEGATPVQVDAVLTSLDLNMGVFSMLDLAGIDVSFL 535
Query: 543 TSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRR 602
+A L + L GR G+ G+G Y YE G P+ D V+ + E+ R
Sbjct: 536 MRDANREAIAHDQSYCCLAEELYALGRYGQKTGRGFYLYE-GRSPREDREVIMLAEQLAR 594
Query: 603 LSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRG 662
N+ ++ + EI + LF ++NE R+L+EGI +RASD+D + G FP++ G
Sbjct: 595 EHNVTRR----NIEDLEIHDRCLFVMINEGIRLLDEGIALRASDIDLVWINGYGFPAHLG 650
Query: 663 GIVFWADAVGANYVYTSLKKWSQLYGNF----FKPSRFLEERATKG 704
G + +A+ +G V + + + G + F+P+ LE G
Sbjct: 651 GPMHYAEQLGLETVLSRIHHYRSALGEYGEMWFRPAALLERLVAAG 696
>gi|323526726|ref|YP_004228879.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Burkholderia
sp. CCGE1001]
gi|323383728|gb|ADX55819.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein protein
[Burkholderia sp. CCGE1001]
Length = 706
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 240/699 (34%), Positives = 369/699 (52%), Gaps = 29/699 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
V ++T+ + PVNAL+ + GL E A S V+A++L G G F G DI F K
Sbjct: 18 VLLVTIDHAPVNALSADVRRGLLAAIEAADSERAVEAVLLVGAGRNFIAGADIREFGK-- 75
Query: 75 GAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
P V L V N IE C KP+VAA+ G ALGGGLE+A+ H RIA +LG
Sbjct: 76 --------PPVPPSLPDVCNRIEACTKPVVAAIHGAALGGGLEVALAAHYRIAVEGAKLG 127
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 189
LPE+ LG++PG TQR PRL+G + A+++ML + +++E LGL+D + S ++L
Sbjct: 128 LPEVQLGLLPGAGGTQRTPRLIGAAAALDLMLSGRHASAKEALALGLVDRLGASGDILAE 187
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSE---AREVLKLARLQAKKTAPNMPQHQACLD 246
+A + A + RT +LS+ + + AR + +K + + +D
Sbjct: 188 GLAYAHALLAAHA----TARRTRDAAALSDRAASLAAVVAARTETEKKSRGLFSPLKIVD 243
Query: 247 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 306
+E + G+ E ++F + + GLVH FFA+R K P D KPR +
Sbjct: 244 AVEAAVTQPFEEGLRVERQLFLQCLDSPQRAGLVHAFFAEREVLKAPETRDA--KPRALA 301
Query: 307 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 366
+ V+GGG MG+GIA A + + V + E + L +G IE GL+ +G+++ +K
Sbjct: 302 AIGVVGGGTMGAGIAVAVLDAGLPVTMIERDEASLARGRAHIEKVYDGLIAKGRMSAEKK 361
Query: 367 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 426
+ G Y + D+VIEAV E + +KQ +F+EL++ C +LATNTS +D++
Sbjct: 362 AELMARWTGSTSYEALANADLVIEAVFEDLAVKQAVFAELDRVCKAGAVLATNTSYLDID 421
Query: 427 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 486
+ S +IG HFFSPA++M LLE+V SA V+ + K ++K PV G C
Sbjct: 422 AIAAGISRPADVIGLHFFSPANIMKLLEVVVPRAVSADVVATAFELAKKLRKTPVRAGVC 481
Query: 487 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKE 546
GF NR Y +A ++ G ++ID+A+R+FG P+GPFQ++DLAG + A K
Sbjct: 482 DGFIGNRILAVYRSAADAMMEDGASPYQIDAAVRAFGFPMGPFQVVDLAGGDIGWAARKR 541
Query: 547 FDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKP-KPDPSVLPIIEECRRLSN 605
+ + D L + G G+ G+G Y Y +GS+ +PDP V II+ R +
Sbjct: 542 RAATRNPAARYVQIADRLCERGWFGQKTGRGFYLYPEGSRSGQPDPEVEAIIDAERARAG 601
Query: 606 IMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIV 665
I P S T+ EI+ + ++NE V+ E I +R D+D + G FP YRGG +
Sbjct: 602 ITPR----SFTDDEIMRRYMAAMINEGANVVHERIALRPLDVDVTLLYGYGFPRYRGGPM 657
Query: 666 FWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+AD VG V ++++++ F++ S L E +G
Sbjct: 658 KYADMVGLPRVLADIREFAKEDPLFWQASPLLVELVERG 696
>gi|357024730|ref|ZP_09086872.1| enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Mesorhizobium
amorphae CCNWGS0123]
gi|355543398|gb|EHH12532.1| enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Mesorhizobium
amorphae CCNWGS0123]
Length = 689
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 268/710 (37%), Positives = 369/710 (51%), Gaps = 45/710 (6%)
Query: 8 MEVGNDG-VAIITLINPPVNALAIPIVAGLKDKFEEATSRDD--VKAIVLTGNGGRFSGG 64
+ V +DG VA++T+ NPPVNA++ + L A RDD V AIV+ G F G
Sbjct: 5 VSVASDGDVAVVTIDNPPVNAMSFHVREPLHQAL--AALRDDPSVAAIVIACAGRTFVAG 62
Query: 65 FDINVFQKVHGAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHA 122
DI F K P EL V+ L+E KP VAA+ G ALGGGLELA+GCH
Sbjct: 63 ADITEFGK----------PVQQPELRAVIALLETIAKPTVAAIHGTALGGGLELALGCHF 112
Query: 123 RIAAPKTQLGLPEL---TLGVIPGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDA 179
R+A K +LGLPE+ L GT RLPRLVG KA+ M++ I + E + GL+DA
Sbjct: 113 RVADSKAKLGLPEVKLGLLPGGGGTVRLPRLVGAEKALGMIVSGAPIGAVEALEAGLVDA 172
Query: 180 VVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEA---REVLKLARLQAKKTAP 236
V E + + R +A ++ A+ ++ R D+LG A R+ +LA K A
Sbjct: 173 VFDGELVAQAVR-FASEMVAKGGRFLPVRDRNDRLGKTDLAAFDRQAAELA-----KKAR 226
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
+ AC + I + E ++F +LV D SR H+FFA+R ++ P
Sbjct: 227 GLEAPIACAQAVRNAISLSFDEALAAERELFLKLVAGDQSRAQRHLFFAEREAARGPG-K 285
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D+ R + ++ +IG G MG GIA A V L E N E L +G+ TI+ N V
Sbjct: 286 DVAR--RKITRIGIIGAGTMGGGIAMAFANGGFPVTLLETNEEALQRGLATIDKNYAVSV 343
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
RG LT+ L + KG DY++ D D+++EAV E + +KQ++F +L+ P IL
Sbjct: 344 GRGSLTEAARQQRLGLFKGSTDYADLADCDLIVEAVFEEMAVKQEVFGKLDAVAKPGAIL 403
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
ATNTS +D+N + TS ++G HFFSPA+VM LLEIVR E+T+ + ++ + + I
Sbjct: 404 ATNTSYLDVNAIAASTSRPQDVVGLHFFSPANVMKLLEIVRAEKTAPDALATVVELARGI 463
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
KVPVVVG C GF NR + L+ G +ID FG PIGPFQ+ DLAG
Sbjct: 464 GKVPVVVGVCHGFVGNRMLAARGAESEALLLEGATPSQIDRVFTDFGWPIGPFQMGDLAG 523
Query: 537 YGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLP 595
+ K R + + D L + GR G+ G G Y YE GS+ P PDP V
Sbjct: 524 LDIGWRNRKA-------RGLTAVIADTLCEQGRFGQKTGSGWYRYEDGSRDPSPDPEVEN 576
Query: 596 IIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGM 655
+I R G ++ EI+E L+P+VNE ++LEE I RASD+D V G
Sbjct: 577 LI----RAKAAEKGIAARAIDADEIIERTLYPLVNEGAKILEEKIADRASDIDVVWVNGY 632
Query: 656 SFPSYRGGIVFWADAVGANYVYTSLKKWSQLYG-NFFKPSRFLEERATKG 704
FP +GG +FWA GA + L+ W G FKP+ L A G
Sbjct: 633 GFPIGKGGPMFWAGLEGAGKIVERLEYWHGQTGKEVFKPAPLLRRFAETG 682
>gi|404253295|ref|ZP_10957263.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingomonas sp. PAMC 26621]
Length = 681
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 239/700 (34%), Positives = 364/700 (52%), Gaps = 44/700 (6%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+D V +I NPPVNAL + GL+ +E + VKA+V+ +G F G DI F
Sbjct: 14 HDDVLVIISNNPPVNALGAAVRQGLEAGIKEGLANPQVKAMVIRCDGRTFFAGADITEFG 73
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K M + + VV++IE KP++AA+ G ALGGG E+ +GCH RIA P ++
Sbjct: 74 KP--------MQEPGLPTVVDMIEASDKPVIAAIHGTALGGGCEVTLGCHYRIAVPSAKI 125
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
G PE+ LG++PG TQRLPR+ G+ A+E+ I ++ GLID + L
Sbjct: 126 GTPEVKLGLLPGAGGTQRLPRIAGVKLALELTAKGDPIPAKLALSAGLIDRLANENNLEA 185
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKK----TAPNMPQHQAC 244
+ +A ++A ++L R + + V + + AK+ AP + AC
Sbjct: 186 DAIAFAREVAD-----TKTLPRARDKVAQAAPESVAQFKKDNAKRFRGFEAP--AANIAC 238
Query: 245 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRG 304
++ +G G+ E + F +L+M S H+FFA+R +K+ + D + R
Sbjct: 239 VEKATDGSSFD--EGIAFERQEFMKLMMGVQSAAQRHIFFAERQAAKIDGI-DPKIPLRE 295
Query: 305 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 364
+++V VIG G MG GI+ + I V + E+ E L +G TI N +G+L +
Sbjct: 296 IKRVGVIGAGTMGGGISMNFLSAGIPVTIVEMAQEALDRGAGTIRKNYEASAAKGRLKPE 355
Query: 365 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 424
+ A+ L LD+ D D++IEAV E++ +K++IF+ L+ P ILA+NTS +D
Sbjct: 356 QVEQAMGALTPTLDFDALADCDLIIEAVYENMDVKKEIFTRLDAIAKPGAILASNTSYLD 415
Query: 425 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 484
++ + T ++G HFFSPA+VM LLE+VR +T V+ +M + K I+KV VV G
Sbjct: 416 IDEIASVTKRPGDVVGMHFFSPANVMKLLEVVRGAQTEDDVLATVMALSKTIRKVAVVAG 475
Query: 485 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATS 544
C GF NR P A L+ G +ID +FG+P+GPFQ+ DLAG +
Sbjct: 476 VCDGFIGNRMLKPRQVEAMKLLMEGATPEQIDKVHVAFGMPMGPFQMSDLAGVDIGWHR- 534
Query: 545 KEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLS 604
D + + D L GR G+ GKG Y Y++ P P P V IIE+ R S
Sbjct: 535 --------DPTRIENIRDALAAEGRWGQKTGKGFYDYDEKRTPTPSPRVAEIIEDFRSKS 586
Query: 605 NIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGI 664
N+ + ++++EIVE L+ +VNE +LEE + RASD+D + G +P YRGG
Sbjct: 587 NL----QKREISDQEIVEKTLYTMVNEGALILEEKMAQRASDIDVVWIYGYGWPVYRGGP 642
Query: 665 VFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+FWAD G + L+K + F + L+ +A G
Sbjct: 643 MFWADTEGLKTIVAGLEK------HGFAVAELLKSKAESG 676
>gi|209519293|ref|ZP_03268093.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia sp. H160]
gi|209500242|gb|EEA00298.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia sp. H160]
Length = 700
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 234/706 (33%), Positives = 367/706 (51%), Gaps = 27/706 (3%)
Query: 4 PRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSG 63
P V+ N G+A+ T+ NPP+NAL+I + GL D E A + DDV+ +V+ G F
Sbjct: 4 PYVSYSKSN-GIAVATIDNPPINALSIGVRRGLMDAIERAQAEDDVQVLVIACAGRTFVA 62
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DI+ F + + + S+ +++ + KP +AA+ G ALGGGLELA+ C R
Sbjct: 63 GADISEFGQPY--------EEPSLYKILDALGTSSKPSIAAIHGTALGGGLELALSCTWR 114
Query: 124 IAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAV 180
+A Q+G PE+ LG++PG TQ RL G A+++ +++E+ + G+ID +
Sbjct: 115 LAQVTAQIGQPEVKLGLMPGGYGTQWWLRLAGPQVALDVSTSGNPVSAEQAHEWGVIDYL 174
Query: 181 VTSEE--LLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAR-EVLKLARLQAKKTAPN 237
VT + L+ +R +A D+ + + RT G L + + + R + ++
Sbjct: 175 VTDRDVDLVSAARAFAQDLNCKG---TLARDRTAIKGPLKDVDLSMFETYRQKNQRKWHG 231
Query: 238 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 297
+ Q +DV+E G E K F+E S L H+FFA+R KV
Sbjct: 232 LVAPQKIVDVLEASCALTFDEGCALEKKAFQECEHSPESASLRHLFFAEREAGKVRGADK 291
Query: 298 IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 357
P ++ V VIG G MG GIA A + VVL + E L + I I+AN V
Sbjct: 292 A--TPLDIKSVTVIGAGTMGQGIAQACASAGLSVVLVDRTYEALERAIVAIQANYETSVA 349
Query: 358 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 417
RG + + KA+ A ++ D D++IEAV E + +KQ +F +L+ P ILA
Sbjct: 350 RGSMARAKADRAFNLISISCDLVAVSTCDLIIEAVFEDLGVKQSVFRDLDAVAKPEAILA 409
Query: 418 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 477
TNTST+D++++ T +++G HFFSPAHVM L+E+++ +TS +V ++ + K ++
Sbjct: 410 TNTSTLDIDLIANVTRRPQQVVGMHFFSPAHVMKLVEVIKGSQTSDEVSATILKITKALR 469
Query: 478 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGY 537
K+ V GN GF NR Y + A L+ G ++ID + FG P+G F + D+AG
Sbjct: 470 KIAVFAGNEEGFIGNRILGAYGREADYLLEEGATPWQIDRVLNQFGFPMGLFAMRDMAGL 529
Query: 538 GV--AAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLP 595
V +E P S L D + + GR G+ G G Y YE G P P +
Sbjct: 530 DVIWRIRQGQERKGTRPAYERYSVLADRICEQGRFGQKTGSGYYKYE-GRTATPCPEIEA 588
Query: 596 IIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGM 655
+I + + I + ++++ IV+ I+ +VNE R+++ G RASD+D G
Sbjct: 589 LIVQVSADAGI----ERREISDEAIVQRIMCAMVNEGARIIDSGTAQRASDIDIVYTNGY 644
Query: 656 SFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERA 701
FPSYRGG +FWA G VY ++++ +LYG+ +KP++ L E A
Sbjct: 645 GFPSYRGGPMFWAQQTGLQKVYEQVQEYHKLYGDTWKPAQSLAEAA 690
>gi|320165951|gb|EFW42850.1| peroxisomal bifunctional enzyme [Capsaspora owczarzaki ATCC 30864]
Length = 720
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 260/723 (35%), Positives = 392/723 (54%), Gaps = 38/723 (5%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A++++ NPPVN L + G+ EA S V+A+VL G G F G DI F+
Sbjct: 12 IAVLSISNPPVNTLNHAVRHGIVRSVREAISDARVQALVLVGAGRSFPAGADIKEFR--- 68
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G +L V E V +++E KPIVAA+ G ALGGGLELA+GCH R+A LGLP
Sbjct: 69 --GGQALNAPVLTE-VCDVLEQSPKPIVAALHGTALGGGLELALGCHYRVALDSAHLGLP 125
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE------- 184
E+ LG++PG TQRLPRL+GL +A+++++ + I++ KLGLID + +
Sbjct: 126 EVHLGILPGAGGTQRLPRLIGLQRALDLIVSGQHISAAAALKLGLIDQIFQAGAPAAAEG 185
Query: 185 ELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLK--LARLQAKKTAPNMPQHQ 242
LL + +A IA+R R + S + +V LA ++A+ + P
Sbjct: 186 TLLDRAVEYAQGIASRPLDGRRVSELVPRDKSTFDQSDVWDKALATVKAQHRGYDAPIR- 244
Query: 243 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 302
++ + G+ KE ++ L+ + L H+FFA+R VP + KP
Sbjct: 245 -IVEAVRAAAQLPFKQGMAKEYELVVNLMKGPQASALQHLFFAEREVGTVPGLNPSLAKP 303
Query: 303 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 362
VR V V+G G MG+GIA + I VVL + E+L +G+ I A V +GKLT
Sbjct: 304 --VRSVGVLGAGTMGAGIAMVFLNAKIPVVLLDTKQEFLDRGLAGIRAVYASDVKKGKLT 361
Query: 363 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 422
++ L +L LDY+ F +VD+ IEAV E++ +K+++F++L+ C P ILA+NTST
Sbjct: 362 EEALAKRLALLTPTLDYAAFANVDLAIEAVFENMDIKKQVFAKLDAVCKPEAILASNTST 421
Query: 423 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 482
++++ + T ++ IG HFFSPA+VM LLE VR +++S I +M + K IKKV V+
Sbjct: 422 LNIDEMAAATKRPEQFIGTHFFSPANVMRLLENVRGKKSSPSTIATVMALSKTIKKVGVL 481
Query: 483 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVA-- 540
VGNC GF NR Y++ A ++ G ++D + SFG+ +GPFQ+ DLAG V
Sbjct: 482 VGNCDGFVGNRMLEGYAREASFMLEEGALPAQVDKVLTSFGMAMGPFQMGDLAGNDVGWR 541
Query: 541 -----AATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGS-KPKPDPSVL 594
T+ A R + L D L + GR G+ G G Y YE+G K PD +V
Sbjct: 542 IRQGKGMTNPATRPAKEGRYCE--LGDKLCELGRFGQKAGAGWYKYEQGQRKAIPDDAVA 599
Query: 595 PIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLG 654
+IE I S++++EI E ++P++NE +VLEEGI +R D+D G
Sbjct: 600 KLIEAHSSSKGIARR----SISDEEIFERCMYPLINEGFKVLEEGIALRPGDIDIIWAYG 655
Query: 655 MSFPSYRGGIVFWADAVGANYVYTSLKKWSQLY--GNFFKPSRFLEERATKGIPLSAPVS 712
FP YRGG + A +G +YT+L K+S+ + + F PS+ L+ A L ++
Sbjct: 656 YGFPRYRGGPMHVAQTIGLKKIYTALAKYSKQFPTSHHFVPSKLLQTLAETNTTLEQHLA 715
Query: 713 SSS 715
+ S
Sbjct: 716 TKS 718
>gi|90417373|ref|ZP_01225298.1| fatty oxidation complex, alpha subunit [gamma proteobacterium
HTCC2207]
gi|90330815|gb|EAS46084.1| fatty oxidation complex, alpha subunit [marine gamma
proteobacterium HTCC2207]
Length = 704
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 250/712 (35%), Positives = 381/712 (53%), Gaps = 31/712 (4%)
Query: 3 APRVT-MEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRF 61
+P VT EV D + II + NPPVNAL+ + G+ A D KA++L G F
Sbjct: 5 SPSVTSYEVRGD-IGIIWINNPPVNALSQALRDGIYAAVN-AAQDDATKALILICKGRTF 62
Query: 62 SGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCH 121
G DI+ F K + S V+ IE KP+VAA+ G ALGGGLE A+ CH
Sbjct: 63 IAGADISEFDKAP--------TEPSFNQVLATIEQSSKPMVAAIHGTALGGGLETALACH 114
Query: 122 ARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
R A +GLPE+ LG++PG TQR PRL G+ AI+++ I ++ L LID
Sbjct: 115 YRCAVSTAMVGLPEVKLGLLPGAGGTQRAPRLTGVEAAIKLITSGNPIKAKAAVGLNLID 174
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 238
++ ++LL+ + + + A + P ++ T S A + +R Q + A
Sbjct: 175 HIIDGDDLLEGALAYTQQLLADKAPLLKVRDITIDPASFDPA--IFDQSRKQLSRRARGQ 232
Query: 239 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDI 298
Q +D IE G+ E ++F +L S + H+FFAQR +K+ +
Sbjct: 233 LAPQRIVDCIEAAATTSFDEGLATEGRLFMDLKDDSQSAAMRHMFFAQREANKIKGIGKE 292
Query: 299 GLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTR 358
+K R ++ VA+IGGG MG GIA I V + E+N E L +G+ I+ N V +
Sbjct: 293 TVK-RPIQSVAIIGGGTMGGGIAMNFANVGIPVTMLEINDEALQRGLGIIDKNYSMTVKK 351
Query: 359 GKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 418
G+L++++ + + ++ G DY + D+VIEAV E++ +KQ++F++L+K C P ILA+
Sbjct: 352 GRLSEEQKHGCMSLISGTTDYQDLATADLVIEAVFENLEIKQQVFAKLDKVCKPGAILAS 411
Query: 419 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKK 478
NTS D+N + T + +IG HFFSPA++M LLEIVR ++TS +VI M V K I K
Sbjct: 412 NTSYQDVNAIAAATQRPEDVIGLHFFSPANIMKLLEIVRADKTSDEVIATSMAVAKAIGK 471
Query: 479 VPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLA--- 535
VPV+ G C GF NR F Y + +L + G +ID + +G+ +GP + DLA
Sbjct: 472 VPVLSGVCFGFIGNRMFSEYGRETQLCLIEGASAEQIDRVMEDYGMAMGPLAVSDLAGID 531
Query: 536 -GYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSV 593
GY V S+E +K P RSF + D L++ GR G+ G G Y Y+ ++ + DP V
Sbjct: 532 IGYKVREGLSEE-EKGDP-RSF--CVADALVEQGRLGQKTGAGFYQYDPQTRARISDPEV 587
Query: 594 LPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVL 653
+IE N+ +++EI + +L P++NE ++L+EGI R+ D+D V
Sbjct: 588 NALIEAKAAEYNV----SRRDFSDEEIRDRLLLPLINEGAKILQEGIAQRSGDIDVVYVF 643
Query: 654 GMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYG-NFFKPSRFLEERATKG 704
G FP Y GG + +AD +G VY L Q G ++++P+ ++ A G
Sbjct: 644 GYGFPVYHGGPMQYADHLGLETVYQKLNALHQQSGEDYWQPADLIKTLAETG 695
>gi|68989263|ref|NP_001957.2| peroxisomal bifunctional enzyme isoform 1 [Homo sapiens]
gi|223590229|sp|Q08426.3|ECHP_HUMAN RecName: Full=Peroxisomal bifunctional enzyme; Short=PBE;
Short=PBFE; Includes: RecName: Full=Enoyl-CoA
hydratase/3,2-trans-enoyl-CoA isomerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|62021246|gb|AAH38948.1| Enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
[Homo sapiens]
gi|62898652|dbj|BAD97180.1| enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
variant [Homo sapiens]
gi|83405887|gb|AAI10461.1| Enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
[Homo sapiens]
gi|119598635|gb|EAW78229.1| enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A dehydrogenase,
isoform CRA_b [Homo sapiens]
gi|119598636|gb|EAW78230.1| enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A dehydrogenase,
isoform CRA_b [Homo sapiens]
gi|159032526|emb|CAD22483.1| L-3-hydroxyacyl-CoA dehydrogenase [Homo sapiens]
Length = 723
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 243/724 (33%), Positives = 388/724 (53%), Gaps = 53/724 (7%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
++ +A+I L NPPVNA++ ++ +K+ ++A +KAIV+ G G+FS G DI F
Sbjct: 8 HNALALIRLRNPPVNAISTTLLRDIKEGLQKAVIDHTIKAIVICGAEGKFSAGADIRGFS 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
G +++ VV+ I+ +KP+VAA++G+A GGGLELA+GCH RIA + Q+
Sbjct: 68 APRTFG-------LTLGHVVDEIQRNEKPVVAAIQGMAFGGGLELALGCHYRIAHAEAQV 120
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS---EE 185
GLPE+TLG++PG TQ LPRL G+ A++++ + I ++E KLG++D VV S EE
Sbjct: 121 GLPEVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVVNSDPVEE 180
Query: 186 LLKVS-RLWALDIAARR---KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 241
++ + R+ + +RR KP I+SL D + SEA L+ ++ P
Sbjct: 181 AIRFAQRVSDQPLESRRLCNKP-IQSLPNMDSI--FSEAL-------LKMRRQHPGCLAQ 230
Query: 242 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 301
+AC+ ++ + + G+ KE ++F L+ +R L + FFA+R +K + K
Sbjct: 231 EACVRAVQAAVQYPYEVGIKKEEELFLYLLQSGQARALQYAFFAERKANKWSTPSGASWK 290
Query: 302 ---PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTR 358
R V V V+G G MG GI + I V+ + + L K I + + ++
Sbjct: 291 TASARPVSSVGVVGLGTMGRGIVISFARARIPVIAVDSDKNQLATANKMITSVLEKEASK 350
Query: 359 GKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 418
+ + + L + E VD+VIEAV E + LK+++F+EL C P L T
Sbjct: 351 MQQSGHPWSGPKPRLTSSV--KELGGVDLVIEAVFEEMSLKKQVFAELSAVCKPEAFLCT 408
Query: 419 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKK 478
NTS +D++ + T +IG HFFSPAHVM LLE++ ++ +S I +M + K IKK
Sbjct: 409 NTSALDVDEIASSTDRPHLVIGTHFFSPAHVMKLLEVIPSQYSSPTTIATVMNLSKKIKK 468
Query: 479 VPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYG 538
+ VVVGNC GF NR PY A L+ G +D + FG +GPF++ DLAG
Sbjct: 469 IGVVVGNCFGFVGNRMLNPYYNQAYFLLEEGSKPEEVDQVLEEFGFKMGPFRVSDLAGLD 528
Query: 539 VAAATSKEFDKAFP------------DRSFQSPLVDLLLKSGRNGKANGKGLYTYEK--G 584
V + K P +R + P+ D+L + GR G+ GKG Y Y+K G
Sbjct: 529 VGWKSRKGQGLTGPTLLPGTPARKRGNRRY-CPIPDVLCELGRFGQKTGKGWYQYDKPLG 587
Query: 585 SKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRA 644
KPDP + + R+ +I +P ++++ EI+E L+ ++NE+ R+L EGI
Sbjct: 588 RIHKPDPWLSKFLSRYRKTHHI----EPRTISQDEILERCLYSLINEAFRILGEGIAASP 643
Query: 645 SDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF--FKPSRFLEERAT 702
+D + G +P ++GG +F+A VG V L+K+ + + +PS +L++ A+
Sbjct: 644 EHIDVVYLHGYGWPRHKGGPMFYASTVGLPTVLEKLQKYYRQNPDIPQLEPSDYLKKLAS 703
Query: 703 KGIP 706
+G P
Sbjct: 704 QGNP 707
>gi|413945014|gb|AFW77663.1| hypothetical protein ZEAMMB73_186479 [Zea mays]
Length = 352
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/355 (54%), Positives = 255/355 (71%), Gaps = 12/355 (3%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR 60
MA TMEV DGVA+IT+INPPVNAL++ ++A L+ + EA SR+D+KAIVLTG+ GR
Sbjct: 1 MARGITTMEVRADGVAVITIINPPVNALSLDVIASLQRNYAEALSRNDIKAIVLTGSKGR 60
Query: 61 FSGGFDINVFQ---KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELA 117
F GGFDI F+ K G +S ++ + +++ED KP VAA++G+ALGGGLE+A
Sbjct: 61 FCGGFDIAAFENKPKNEKPGSMS------IDFLTDIVEDAHKPSVAAIDGIALGGGLEVA 114
Query: 118 MGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKL 174
M CHARI+ P QLGLPEL LG+IPG TQRLPRLVGL KA+EMML SK+I + +L
Sbjct: 115 MVCHARISTPSAQLGLPELQLGIIPGMGGTQRLPRLVGLPKALEMMLTSKTIKGKMAHEL 174
Query: 175 GLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKT 234
GL+DAV ++ +L+ + WAL+I ++KPW +SLHRTD+L L E +++LK AR+QA+
Sbjct: 175 GLVDAVTSANKLVNTACSWALEIFEKKKPWFKSLHRTDRLPDLEEVKDILKFARVQAEMK 234
Query: 235 APNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPN 294
A N+ C+DVI+EGI+ G +G++KE K L TS+ L H FFAQRATSK+PN
Sbjct: 235 AANVQHPIVCIDVIKEGIISGPRAGLMKEVLSGKMLEQSQTSKSLRHFFFAQRATSKIPN 294
Query: 295 VTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIE 349
+T+IGL R ++K A++GGGLMGSGIAT ILNN VVLKEVN ++L GI I+
Sbjct: 295 ITNIGLTARKIKKAAIVGGGLMGSGIATILILNNFNVVLKEVNEQFLSAGINRIK 349
>gi|341613565|ref|ZP_08700434.1| fatty oxidation complex, alpha subunit [Citromicrobium sp. JLT1363]
Length = 678
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 231/675 (34%), Positives = 358/675 (53%), Gaps = 30/675 (4%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+D V +I NPPVNAL + AGL D EA S D V+A+V+ +G F G DI F
Sbjct: 10 HDNVLVIISDNPPVNALGQAVRAGLVDGISEALSDDSVEAVVIRCDGRTFFAGADITEFG 69
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K S+ ++ +E+ KP+VAA+ G ALGGG E+A+ CH R+A P ++
Sbjct: 70 KPPQG--------PSLPEALDKLEESDKPVVAAIHGTALGGGCEVALACHYRVAVPSAKM 121
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
GLPE+ LG+IPG TQRLPRLVG A+ ++ + I++++ ++GL+D +V + L
Sbjct: 122 GLPEVKLGLIPGAAGTQRLPRLVGAEAALPLVAIGNPISAKKAKEIGLLDELVGEDSL-- 179
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 248
+ A + +P RS + ++ R + + A ++ +
Sbjct: 180 AADAIAFAKSKIGQPVPRSSEGDANQDGIKNP-DIFDEFRAKNGRKMRGFDAPNAAIEAV 238
Query: 249 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRK 307
+ GV KE ++F +L+ S+ + H FFA+RA +KV ++ D L ++K
Sbjct: 239 KAAGELSYAEGVKKERELFGKLMTGTQSKAMRHYFFAERAANKVDDIPADTPLID--IKK 296
Query: 308 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 367
V +IG G MG GIA + I V + E+ E L +G T+ N +G++T ++
Sbjct: 297 VGIIGAGTMGGGIAMNFLSAGIPVTILEMKQEALDRGTATMRKNYEATAKKGRMTAEQVE 356
Query: 368 NALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 427
A+ +L L+YS+ D D+VIEAV ES+ +K+ +F +L++ ILA+NTS +D+N
Sbjct: 357 QAMGLLTPTLEYSDLADCDLVIEAVYESMDVKKDVFGKLDEVVKDGAILASNTSYLDINE 416
Query: 428 VGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 487
+ T ++G HFFSPA+VM LLE+VR E+T V+ M + K I KV V G C
Sbjct: 417 IATATKRPGYVLGLHFFSPANVMKLLEVVRGEKTRDDVLATAMKLSKKIGKVAAVSGVCP 476
Query: 488 GFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEF 547
GF NR + A L+ G + + +D + FG P+GPFQ+ DLAG +
Sbjct: 477 GFIGNRMLSKRQEQANQLILEGANYWDVDDVLLDFGFPMGPFQMGDLAGIDIGWHR---- 532
Query: 548 DKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIM 607
D S + + + L GR G+ GKG Y Y++ + P V II +
Sbjct: 533 -----DPSKVTTIREALCAVGRFGQKAGKGFYDYDEARQRTPSDEVKQIIADFAEKE--- 584
Query: 608 PGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFW 667
G + +++ EI E +L+P+VNE ++L+EG+ RASD+D + G +P Y GG +FW
Sbjct: 585 -GNEQRDISKDEIRERLLYPMVNEGAKILDEGMAQRASDIDVVWINGYGWPLYTGGPMFW 643
Query: 668 ADAVGANYVYTSLKK 682
AD +G + V L+K
Sbjct: 644 ADTIGLDTVVAGLEK 658
>gi|114590836|ref|XP_517004.2| PREDICTED: peroxisomal bifunctional enzyme isoform 2 [Pan
troglodytes]
gi|410226936|gb|JAA10687.1| enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase [Pan
troglodytes]
gi|410247014|gb|JAA11474.1| enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase [Pan
troglodytes]
gi|410289468|gb|JAA23334.1| enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase [Pan
troglodytes]
gi|410332285|gb|JAA35089.1| enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase [Pan
troglodytes]
gi|410332287|gb|JAA35090.1| enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase [Pan
troglodytes]
gi|410332289|gb|JAA35091.1| enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase [Pan
troglodytes]
Length = 723
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 244/724 (33%), Positives = 389/724 (53%), Gaps = 53/724 (7%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
++ +A+I L NPPVNA++ ++ +K+ ++A +KAIV+ G G+FS G DI F
Sbjct: 8 HNALALIRLRNPPVNAISTTLLRDIKEGLQKAVIDHTIKAIVICGAEGKFSAGADIRGFS 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
G +++ VV+ I+ +KP+VAA++G+A GGGLELA+GCH RIA + Q+
Sbjct: 68 APRTFG-------LTLGHVVDEIQRNEKPVVAAIQGMAFGGGLELALGCHYRIAHAEAQV 120
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS---EE 185
GLPE+TLG++PG TQ LPRL G+ +++++ + I ++E KLG++D VV S EE
Sbjct: 121 GLPEVTLGLLPGARGTQLLPRLTGVPASLDLITSGRRILADEALKLGILDKVVNSDPVEE 180
Query: 186 LLKVS-RLWALDIAARR---KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 241
++ + R+ + +RR KP I+SL D + SEA +LK+ R P
Sbjct: 181 AIRFAQRVSDQPLESRRLCNKP-IQSLPNMDSI--FSEA--LLKMRRQH-----PGCLAQ 230
Query: 242 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 301
+AC+ ++ + + G+ KE ++F L+ +R L + FFA+R +K + K
Sbjct: 231 EACVRAVQAAVQYPYEVGIKKEEELFLYLLQSGQARALQYAFFAERKANKWSTPSGASWK 290
Query: 302 ---PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTR 358
R V V V+G G MG GI + I V+ + + L K I + + ++
Sbjct: 291 TASARPVSSVGVVGLGTMGRGIVISFARARIPVIAVDSDKNQLATANKMITSVLEKEASK 350
Query: 359 GKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 418
+ + + L + E VD+VIEAV E + LK+++F+EL C P L T
Sbjct: 351 MQQSGHPWSGPKPRLTSSM--KELGGVDLVIEAVFEEMSLKKQVFAELSAVCKPEAFLCT 408
Query: 419 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKK 478
NTS +D++ + T +IG HFFSPAHVM LLE++ ++ +S I +M + K IKK
Sbjct: 409 NTSALDVDEIASSTDRPHLVIGTHFFSPAHVMKLLEVIPSQYSSPTTIATVMNLSKKIKK 468
Query: 479 VPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYG 538
+ VVVGNC GF NR PY A L+ G +D + FG +GPF++ DLAG
Sbjct: 469 IGVVVGNCFGFVGNRMLNPYYNQAYFLLEEGSKPEEVDQVLEEFGFKMGPFRVSDLAGLD 528
Query: 539 VAAATSKEFDKAFP------------DRSFQSPLVDLLLKSGRNGKANGKGLYTYEK--G 584
V + K P +R + P+ D+L + GR G+ GKG Y Y+K G
Sbjct: 529 VGWKSRKGQGLTGPTLPPGTPARKRGNRRY-CPIPDVLCELGRFGQKTGKGWYQYDKPLG 587
Query: 585 SKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRA 644
KPDP + + + R +I +P ++++ EI+E L+ ++NE+ R+L EGI
Sbjct: 588 RIHKPDPWLSKFLSQYRETHHI----EPRTISQDEILERCLYSLINEAFRILGEGIAASP 643
Query: 645 SDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF--FKPSRFLEERAT 702
+D + G +P ++GG +F+A VG V L+K+ + + +PS +L++ A+
Sbjct: 644 EHIDVVYLHGYGWPRHKGGPMFYASTVGLPTVLEKLQKYYRQNPDIPQLEPSDYLKKLAS 703
Query: 703 KGIP 706
+G P
Sbjct: 704 QGNP 707
>gi|420250967|ref|ZP_14754168.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia sp. BT03]
gi|398059407|gb|EJL51260.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia sp. BT03]
Length = 698
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 238/702 (33%), Positives = 372/702 (52%), Gaps = 34/702 (4%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
++G+A+ T+ NPP+NAL+I + GL D E A + DDVKA+V+ F G DI+ F
Sbjct: 9 SNGIAVATIDNPPINALSIGVRRGLMDAIERAQAEDDVKALVIACASRTFVAGADISEFG 68
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K + + S+ +++ + KP +AA+ G+ALGGGLELA+ C RIA Q+
Sbjct: 69 KPY--------EEPSLYKILDALGTSSKPSIAAIHGMALGGGLELALSCTWRIAQLNAQI 120
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEE--L 186
G PE+ LG++PG TQ RL G A+++ + +E+ + G+ID +VT ++ L
Sbjct: 121 GQPEVKLGLMPGGYGTQWWLRLAGPQVALDVSTSGNPVPAEQAHEWGVIDYLVTDQDVDL 180
Query: 187 LKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQA-----KKTAPNMPQH 241
+ + +A D+ ++ +L R LG++ + + LA +A +K +
Sbjct: 181 VSAATAFAQDLISKG-----TLAR--DLGAIKGPVKDVDLAVFEAYRQKNQKKWRGLVAP 233
Query: 242 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 301
Q +DV+E G E K F+E S L H+FFA+R KVP TD
Sbjct: 234 QKIVDVLEASCALTFDEGCALEKKAFQECEHSPESASLRHLFFAEREAGKVPG-TDKA-T 291
Query: 302 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 361
P ++ VAVIG G MG GIA A + VVL + E L + I I+ N V RG +
Sbjct: 292 PLDIKSVAVIGAGTMGQGIAQACANGGMSVVLVDRTYEALERAIVAIQGNYETSVARGSM 351
Query: 362 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 421
+ KA+ A ++ D D+VIEAV E + +KQ +F +L+ P ILATNTS
Sbjct: 352 ARAKADRAFNLISISSDLVAASKCDLVIEAVFEDLGVKQSVFKDLDAVAMPEAILATNTS 411
Query: 422 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 481
T+D++++ T +++G HFFSPAHVM L+E+++ +TS +V ++ V K ++K+ V
Sbjct: 412 TLDIDLIANVTRRPQQVVGMHFFSPAHVMKLVEVIKGSKTSDEVSATILKVTKALRKIAV 471
Query: 482 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAA 541
GN GF NR Y + A L+ G ++ID + FG P+G F + D+AG V
Sbjct: 472 FAGNEEGFIGNRILGAYGREADYLLEEGATPWQIDRVLNQFGFPMGLFAMRDMAGLDVIW 531
Query: 542 ATSKEFDK--AFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEE 599
+E ++ P S L D + + GR G+ G G Y YE G P P + +I +
Sbjct: 532 RIRQEREQKGTRPAYERYSVLADRICELGRFGQKTGSGYYKYE-GRTATPCPDIEALIVQ 590
Query: 600 CRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPS 659
+ I + ++++ IV+ I+ +VNE R+++ RA D+D G FPS
Sbjct: 591 VSADAGI----ERREISDEAIVQRIMCAMVNEGARIIDSRTAQRAGDIDIVYTNGYGFPS 646
Query: 660 YRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERA 701
YRGG +FWA G VY ++++ +LYG+ ++P++ L E A
Sbjct: 647 YRGGPMFWAQQTGLQKVYEKVQEYHELYGDTWRPAQSLAEAA 688
>gi|296284660|ref|ZP_06862658.1| fatty oxidation complex, alpha subunit [Citromicrobium
bathyomarinum JL354]
Length = 678
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 233/676 (34%), Positives = 355/676 (52%), Gaps = 32/676 (4%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+D V +I NPPVNAL + AGL D EA S D V+A+V+ +G F G DI F
Sbjct: 10 HDNVLVIISDNPPVNALGQAVRAGLVDGISEALSDDSVEAVVIRCDGRTFFAGADITEFG 69
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K S+ ++ +E KP+VAA+ G ALGGG E+A+ CH R+A P ++
Sbjct: 70 KPPQG--------PSLPEALDKLEASDKPVVAAIHGTALGGGCEVALACHYRVAVPSAKM 121
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
GLPE+ LG+IPG TQRLPRLVG A+ ++ + I++++ ++GL+D +V + L
Sbjct: 122 GLPEVKLGLIPGAAGTQRLPRLVGAEAALPLVAIGNPISAKKAKEIGLLDELVGEDSL-- 179
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 248
+ A + +P RS + ++ R + + A ++ +
Sbjct: 180 AADAIAFAKSKIGQPVPRSSEGDANQDGIRNP-DIFDEFRAKNGRKMRGFDAPNAAIEAV 238
Query: 249 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPR--GVR 306
+ GV KE ++F +L+ S+ + H FFA+RA +KV DI P ++
Sbjct: 239 KAAGELSYAEGVKKERELFMKLMTGTQSKAMRHYFFAERAANKV---DDIPADPPLIDIK 295
Query: 307 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 366
KV +IG G MG GIA + I V + E+ E L +G T+ N +G++T ++
Sbjct: 296 KVGIIGAGTMGGGIAMNFLSAGIPVTILEMKQEALDRGTATMRKNYEATAKKGRMTAEQV 355
Query: 367 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 426
A+ L L+YS+ D D+VIEAV ES+ +K+ +F +L+K ILA+NTS +D+N
Sbjct: 356 EQAMGHLTPTLEYSDLADCDLVIEAVYESMDVKKDVFGKLDKVVKQGAILASNTSYLDIN 415
Query: 427 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 486
+ T ++G HFFSPA+VM LLE+VR E+T V+ M + K I KV V G C
Sbjct: 416 EIATATERPGYVLGLHFFSPANVMKLLEVVRGEKTRDDVLATAMKLSKKIGKVAAVSGVC 475
Query: 487 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKE 546
GF NR + A L+ G + + +D + FG P+GPFQ+ DLAG +
Sbjct: 476 PGFIGNRMLSKRQEQANQLILEGANYWDVDDVLLDFGFPMGPFQMGDLAGIDIGWHR--- 532
Query: 547 FDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNI 606
D S + + + L GR G+ GKG Y Y++ + P V II +
Sbjct: 533 ------DPSKVTTIREALCAVGRFGQKAGKGFYDYDEARQRTPSDEVKQIIADFAEKE-- 584
Query: 607 MPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVF 666
G + +++ EI E +L+P+VNE ++L+EG+ RASD+D + G +P Y GG +F
Sbjct: 585 --GNEQRDISKDEIRERLLYPMVNEGAKILDEGMAQRASDIDVVWINGYGWPLYTGGPMF 642
Query: 667 WADAVGANYVYTSLKK 682
WAD +G + V L+K
Sbjct: 643 WADTIGLDTVVAGLEK 658
>gi|398846806|ref|ZP_10603760.1| 3-hydroxyacyl-CoA dehydrogenase [Pseudomonas sp. GM84]
gi|398252208|gb|EJN37411.1| 3-hydroxyacyl-CoA dehydrogenase [Pseudomonas sp. GM84]
Length = 701
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 251/714 (35%), Positives = 380/714 (53%), Gaps = 45/714 (6%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A+I L + PVNAL + L +A + +V+AI+L G FS G DI+ F
Sbjct: 13 LALIGLCHAPVNALGHDLRQALMQACSQAAADPEVQAIILHGQQLPFSAGADISEF---- 68
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G + ++ ++ + KP++AA++G+ALGGGLELA+ C R+A +LGLP
Sbjct: 69 --GSPRTWEEPALPELLEALTRIDKPLIAAIDGVALGGGLELALACSHRLATAHARLGLP 126
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT-SEELLKVS 190
E+ LG++PG TQRLPRLVG+ A++MML I + +G LGLID + +++L+++
Sbjct: 127 EVRLGLLPGAGGTQRLPRLVGVEPALDMMLSGDPIDARQGLALGLIDRLPEPGQDMLELA 186
Query: 191 RLWALDIAAR-RKPWIRSLHRTDKLGS-LSEAREVLKLARLQAKKTAPNMPQH------Q 242
+A D+ A+ P + D L S +RE A+L A+K P
Sbjct: 187 CAFARDLLAQPTAPAATPIPLADGLASDFFASRE----AQLVARKPGQRAPLRVLAAVRA 242
Query: 243 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 302
AC + EG+ +E +F+E + + L H FFA+R +VP + D
Sbjct: 243 ACELPLAEGLA--------QEQALFREALQDPQATALRHQFFAEREALRVPGI-DANTTL 293
Query: 303 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 362
R + VAVIG G MG+GIA I I V L E+ E L +G+ I N + RGKLT
Sbjct: 294 RNIANVAVIGAGTMGAGIAMNFINAGIPVRLLELKPEALDRGLAQIRKNYESSIKRGKLT 353
Query: 363 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 422
++ + +L+G LDY++ D D+VIEAV E + +KQ++F L++ C P ILA+NTST
Sbjct: 354 PEQLEQRMSLLQGTLDYADLADADLVIEAVFEDLSIKQQVFRTLDRVCKPGAILASNTST 413
Query: 423 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 482
+D++ + T ++G HFFSPA+VM LLE+VR T+ V+ + + K I K+PVV
Sbjct: 414 LDVDRIAGCTQRPQDVVGLHFFSPANVMRLLEVVRGRATAPDVLATTLKIAKRIGKLPVV 473
Query: 483 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG--YGVA 540
G C GF NR PY + A LV G ++D + GL +G F + DLAG G
Sbjct: 474 SGVCFGFIGNRMLEPYGREAHRLVLEGASPAQVDKVLTGLGLAMGVFAMYDLAGIDVGYL 533
Query: 541 AATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEEC 600
S+ + A F+ L D L GR+G+ +G+G Y YE G + DP V I +
Sbjct: 534 VRQSRRSEIAHDPSYFR--LADELYHLGRHGQKSGRGFYRYE-GRERIEDPEVEQIAAQL 590
Query: 601 RRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSY 660
I+ +PIS + EI + LF ++NE ++L+EGI +R+ D+D G FP++
Sbjct: 591 AAKLGII--RRPIS--DAEIHDRCLFMLINEGLQLLDEGIALRSGDIDLVWTNGYGFPAW 646
Query: 661 RGGIVFWADAVGANYVYTSLKKWSQLYGNF----FKPSRFLEERATKGIPLSAP 710
RGG + +A +G + V T +++ G + +P+ L R L AP
Sbjct: 647 RGGPLHYARELGLDKVLTGIEQLHDQLGAYGRMWLQPAPLL-RRMASSTKLGAP 699
>gi|163857274|ref|YP_001631572.1| fatty oxidation complex alpha subunit [Bordetella petrii DSM 12804]
gi|163261002|emb|CAP43304.1| putative fatty oxidation complex alpha subunit [Bordetella petrii]
Length = 705
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 243/704 (34%), Positives = 375/704 (53%), Gaps = 33/704 (4%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+DG+ ++T+ +PPVNAL+ + GL D + A S ++AIVL G G F G DI F
Sbjct: 15 HDGILVLTIDHPPVNALSADVRRGLADAIQAAQSDAAIQAIVLVGAGRNFIAGADIREFG 74
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K +PDV N IE KP++AA+ G ALGGGLE+A+ H R+A P +L
Sbjct: 75 KPP---QPPALPDV-----CNAIEASAKPVIAALHGAALGGGLEIALAAHYRVALPGARL 126
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
GLPE+ LG++PG TQR PRL G + A+++ML + ++E GLID + +
Sbjct: 127 GLPEVNLGLLPGAGGTQRTPRLAGAAAALDLMLSGRHAGTDEALSWGLIDRIGAGADAQA 186
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSE-----AREVLKLARLQAKKTAPNMPQHQA 243
+A ++ A+ RT L++ A A++Q+++ P
Sbjct: 187 AGLDYARELLAQGA----GPRRTRDAAGLADRPAAQAAIDAARAQVQSRQRGLFSPAK-- 240
Query: 244 CLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPR 303
+D ++ + G+ E +F + + LVH FFA+R T+K P +PR
Sbjct: 241 IVDAVQAALDQPFDEGLRTERALFLQCLDSPQRAALVHAFFAERETAKAPETRQA--RPR 298
Query: 304 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQ 363
+ ++ VIGGG MG+GIA A + + VV+ E N E L +G +E LV +G+L
Sbjct: 299 PLERLGVIGGGTMGAGIAVAMLDAGLPVVMVEQNDEALARGRARVEQVYDLLVKKGRL-- 356
Query: 364 DKANNALKMLK--GVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 421
D A A +M + G Y D D+++EAV E + +K +F+EL++ P +LATNTS
Sbjct: 357 DAAGKAERMARYTGATRYEALADADLIVEAVFEDMDVKLAVFAELDRIAKPGAVLATNTS 416
Query: 422 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 481
+D+N + TS ++G HFFSPA++M LLEIV ++ + + + ++K PV
Sbjct: 417 YLDINRIAAATSRPGDVLGLHFFSPANIMKLLEIVVGANSAPDTVATGFELARRLRKTPV 476
Query: 482 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAA 541
G C GF NR Y Q+A L++ G ++ID A+R+FG P+GP+Q+ DLAG +
Sbjct: 477 RAGVCDGFIGNRILAVYRQAADLMLEDGASPYQIDDAVRAFGYPMGPYQVADLAGGDIGW 536
Query: 542 ATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKP-KPDPSVLPIIEEC 600
AT K R + D L + G G+ G+G Y Y G++ PDP VL II+
Sbjct: 537 ATRKRRAATRDPRLRYVQIPDRLCERGWFGQKTGRGYYLYPDGARTGTPDPEVLAIIDAE 596
Query: 601 RRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSY 660
R+ + + P T+++I+ L +VNE+ VL EGI +R D+D + G FP +
Sbjct: 597 RQRAGVT----PRQFTQEDILRRYLAAMVNEAANVLREGIALRPLDIDVVFLSGYGFPRF 652
Query: 661 RGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
RGG + +AD VG + +++++Q +F++PS L E A G
Sbjct: 653 RGGPLHYADQVGLPRILADIREFAQEDPHFWQPSPLLVELADSG 696
>gi|13473557|ref|NP_105125.1| enoyl-CoA hydratase [Mesorhizobium loti MAFF303099]
gi|14024307|dbj|BAB50911.1| enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Mesorhizobium
loti MAFF303099]
Length = 689
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 258/700 (36%), Positives = 365/700 (52%), Gaps = 30/700 (4%)
Query: 10 VGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINV 69
V ++GVAI+T+ N PVNAL+ + A L + V AIV+ G F G DI
Sbjct: 8 VNDNGVAIVTIDNSPVNALSFHVRAPLMQALVDLRDDASVTAIVIACAGRTFVAGADITE 67
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKT 129
F G PD+ +V ++E KP VAA+ G ALGGGLELA+GCH R+A
Sbjct: 68 F------GKPVQQPDLRA--IVAMLETIAKPTVAAIHGTALGGGLELALGCHFRVADAGA 119
Query: 130 QLGLPEL---TLGVIPGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL 186
+LGLPE+ L GT RLPRLVG KA++M++ I ++E + GL+DAV + L
Sbjct: 120 KLGLPEVKLGLLPGGGGTVRLPRLVGAVKALKMIVSGTPIGADEAHEAGLVDAVFEGD-L 178
Query: 187 LKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLD 246
+ +A +IA + P+ R ++LG A + A L K P AC
Sbjct: 179 TTHAVNFAGEIARKGGPFTPVRDRDERLGETDLAAFDAEAADLARKARGLEAPV--ACAQ 236
Query: 247 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 306
+ + + E +F +LV D SR H+FFA+R +K+P R +
Sbjct: 237 AVRNAVTLPFDEALAAERALFVKLVASDQSRAQRHLFFAEREAAKLPAKDTY---KRRIA 293
Query: 307 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 366
+V VIG G MG GIA A V L E ++E L +G+ TIE N V+RG L +D
Sbjct: 294 RVGVIGAGTMGGGIAMAFANGGFSVTLLETSAEALQRGLGTIEKNYAVSVSRGSLAEDAK 353
Query: 367 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 426
+ L KG DY++ + D++IEAV E + +K+++F +L+ P ILATNTS +D+N
Sbjct: 354 HQRLAQFKGSTDYADLAECDLIIEAVFEDMAVKKEVFGKLDAVAKPGAILATNTSYLDIN 413
Query: 427 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 486
+ S ++G HFFSPA+VM LLEIVR ++T+ + ++ + + I KV VVVG C
Sbjct: 414 EIAGSISRPQDVLGLHFFSPANVMKLLEIVRADKTAPDALATVIDLARRIGKVAVVVGVC 473
Query: 487 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKE 546
GF NR + L+ G +ID A FG P+GPFQ+ DLAG + K
Sbjct: 474 HGFVGNRMLAARGSESEALLLEGATPSQIDKAFTDFGWPMGPFQMGDLAGLDIGWRNRKA 533
Query: 547 FDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVLPIIEECRRLSN 605
R + + D L + GR G+ G+G Y YE G++ PDP V +I R
Sbjct: 534 -------RGLTAVIADTLCEQGRFGQKTGRGFYLYEAGARAGIPDPEVEALI----RDKA 582
Query: 606 IMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIV 665
G P +++ EI+E L+P+VNE ++LEE I RASD+D V G FP +GG +
Sbjct: 583 AERGIAPRAISADEIIERTLYPLVNEGAKILEEKIAARASDIDVVWVNGYGFPIGKGGPM 642
Query: 666 FWADAVGANYVYTSLKKWSQLYG-NFFKPSRFLEERATKG 704
FWA GA + L W Q G + FKP+ L+ A G
Sbjct: 643 FWAGLEGAAKIVQRLDHWHQRTGKDVFKPAPLLKRMAETG 682
>gi|332215007|ref|XP_003256628.1| PREDICTED: peroxisomal bifunctional enzyme isoform 1 [Nomascus
leucogenys]
Length = 723
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 241/724 (33%), Positives = 387/724 (53%), Gaps = 53/724 (7%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
++ +A+I L NPPVNA++ ++ +K+ ++A +KAIV+ G G+FS G DI+ F
Sbjct: 8 HNALALIRLRNPPVNAISTALLRDIKEGLQKAVIDHTIKAIVICGAEGKFSAGADIHGFS 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
G ++ VV+ I+ +KP+VAA++G+A GG LELA+GCH RIA + Q+
Sbjct: 68 APRTFG-------FTLGNVVDEIQRNEKPVVAAIQGMAFGGALELALGCHYRIAHAEAQV 120
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS---EE 185
GLPE+TLG++PG TQ LPRL+G+ A++++ + I ++E KLG++D VV S EE
Sbjct: 121 GLPEVTLGLLPGARGTQLLPRLIGVPAALDLITSGRHILADEALKLGILDKVVNSDPVEE 180
Query: 186 LLKVS-RLWALDIAARR---KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 241
++ + R+ + +RR KP I+SL D + SEA L+ ++ P
Sbjct: 181 AIRFAQRVSDQPLESRRLCNKP-IQSLPNMDTI--FSEAL-------LKMRRQHPGCLAQ 230
Query: 242 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 301
+AC+ ++ + + G+ KE ++F L+ +R L + F A+R +K + K
Sbjct: 231 EACVRAVQAAVQYPYEVGIKKEEELFLYLLQSGQARALQYAFLAERKANKWSTPSGASWK 290
Query: 302 ---PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTR 358
R V V V+G G MG GI + I V+ + + L K I + + ++
Sbjct: 291 TASARPVSSVGVVGLGTMGRGIVISFARARIPVIAVDSDKNQLATANKMITSVLEKEASK 350
Query: 359 GKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 418
+ + + L + E VD+VIEAV E + LK+++F+EL C P L T
Sbjct: 351 MQQSGHPWSGPKPRLTSSM--KELGGVDLVIEAVFEEMSLKKQVFAELSAVCKPEAFLCT 408
Query: 419 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKK 478
NTS +D++ + T ++G HFFSPAHVM LLE++ + +S I +M + K IKK
Sbjct: 409 NTSALDVDEIASSTDRPHLVVGTHFFSPAHVMKLLEVIPSRYSSPTTIATVMNLSKKIKK 468
Query: 479 VPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYG 538
+ VVVGNC GF NR PY A L+ G +D + FG +GPF++ DLAG
Sbjct: 469 IGVVVGNCFGFVGNRMLNPYYNQAYFLLEEGSKPEEVDQVLEEFGFKMGPFRVSDLAGLD 528
Query: 539 VAAATSKEFDKAFP------------DRSFQSPLVDLLLKSGRNGKANGKGLYTYEK--G 584
V + K D P +R + P+ D+L + GR G+ GKG Y Y+K G
Sbjct: 529 VGWKSRKGQDLTGPTLPPGTPARKRGNRRY-CPIPDVLCELGRFGQKTGKGWYQYDKPLG 587
Query: 585 SKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRA 644
KPDP + + + R +I +P ++++ EI+E L+ ++NE+ R+L EGI
Sbjct: 588 RIHKPDPWLSKFLSQYRETHHI----EPRTISQDEILERCLYSLINEAFRILGEGIAASP 643
Query: 645 SDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF--FKPSRFLEERAT 702
+D + G +P ++GG +F+A VG V L+K+ + + +PS +L++ A+
Sbjct: 644 EHIDVVYLHGYGWPRHKGGPMFYASTVGLPTVLEKLQKYYRQNPDIPQLEPSDYLKKLAS 703
Query: 703 KGIP 706
+G P
Sbjct: 704 QGNP 707
>gi|397470061|ref|XP_003806653.1| PREDICTED: peroxisomal bifunctional enzyme [Pan paniscus]
Length = 723
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 243/724 (33%), Positives = 387/724 (53%), Gaps = 53/724 (7%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
++ +A+I L NPPVNA++ ++ +K+ ++A +KAIV+ G G+FS G DI F
Sbjct: 8 HNALALIRLRNPPVNAISTTLLRDIKEGLQKAVIDHTIKAIVICGAEGKFSAGADIRGFS 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
G +++ VV+ I+ +KP+VAA++G+A GGGLELA+GCH RIA + Q+
Sbjct: 68 APRTFG-------LTLGHVVDEIQRNEKPVVAAIQGMAFGGGLELALGCHYRIAHAEAQV 120
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS---EE 185
GLPE+TLG++PG TQ LPRL G+ A++++ + I ++E KLG++D VV S EE
Sbjct: 121 GLPEVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVVNSDPVEE 180
Query: 186 LLKVS-RLWALDIAARR---KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 241
++ + R+ + +RR KP I+SL D + SEA L+ ++ P
Sbjct: 181 AIRFAQRVSDQPLESRRLCNKP-IQSLPYMDSI--FSEAL-------LKMRRQHPGCLAQ 230
Query: 242 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 301
+AC+ ++ + + G+ KE ++F L+ +R L H FFA+R +K + K
Sbjct: 231 EACVRAVQAAVQYPYEVGIKKEEELFLYLLQSGQARALQHAFFAERKANKWSTPSGASWK 290
Query: 302 ---PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTR 358
R V V V+G G MG GI + I V+ + + L K I + + ++
Sbjct: 291 TASARPVSSVGVVGLGTMGRGIVISFARARIPVIAVDSDKNQLAIANKMITSVLEKEASK 350
Query: 359 GKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 418
+ + + L + E VD+VIEAV E + LK+++F+EL C P L T
Sbjct: 351 MQQSGHPWSGPKPRLTSSM--KELGGVDLVIEAVFEEMSLKKQVFAELSAVCKPEAFLCT 408
Query: 419 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKK 478
NTS +D++ + T +IG HFFSPAHVM LLE++ ++ +S I +M + K IKK
Sbjct: 409 NTSALDVDEIASSTDRPHLVIGTHFFSPAHVMKLLEVIPSQYSSPTTIATVMNLSKKIKK 468
Query: 479 VPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYG 538
+ VVVGNC GF NR PY A L+ G +D + FG +GPF++ DLAG
Sbjct: 469 IGVVVGNCFGFVGNRMLNPYYNQAYFLLEEGSKPEEVDQVLEEFGFKMGPFRVSDLAGLD 528
Query: 539 VAAATSKEFDKAFP------------DRSFQSPLVDLLLKSGRNGKANGKGLYTYEK--G 584
V + K P +R + P+ D+L + GR G+ GKG Y Y+K G
Sbjct: 529 VGWKSRKGQGLTGPTLPPGTPARKRGNRRY-CPIPDVLCELGRFGQKTGKGWYQYDKPLG 587
Query: 585 SKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRA 644
KPDP + + + R +I +P ++++ EI+E L+ ++NE+ +L EGI
Sbjct: 588 RIHKPDPWLSKFLSQYRETHHI----EPRTISQDEILERCLYSLINEAFCILGEGIAASP 643
Query: 645 SDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF--FKPSRFLEERAT 702
+D + G +P ++GG +F+A VG V L+K+ + + +PS +L++ A+
Sbjct: 644 EHIDVVYLHGYGWPRHKGGPMFYASTVGLPTVLEKLQKYYRQNPDIPQLEPSDYLKKLAS 703
Query: 703 KGIP 706
+G P
Sbjct: 704 QGNP 707
>gi|395492969|ref|ZP_10424548.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingomonas sp. PAMC 26617]
Length = 681
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 242/700 (34%), Positives = 365/700 (52%), Gaps = 44/700 (6%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+D V +I NPPVNAL + GL+ +E + VKA+V+ +G F G DI F
Sbjct: 14 HDDVLVIISNNPPVNALGAAVRQGLEAGIKEGLANPQVKAMVIRCDGRTFFAGADITEFG 73
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K M + + VV++IE KP+VAA+ G ALGGG E+ +GCH RIA P ++
Sbjct: 74 KP--------MQEPGLPTVVDMIEASDKPVVAAIHGTALGGGCEVTLGCHYRIAVPSAKI 125
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
G PE+ LG++PG TQRLPR+ G+ A+E+ I ++ GLID + L
Sbjct: 126 GTPEVKLGLLPGAGGTQRLPRIAGVKLALELTAKGDPIPAKLALSAGLIDRLANENNLEA 185
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKK----TAPNMPQHQAC 244
+ +A ++A KP R+ DK+ ++ V + AK+ AP + AC
Sbjct: 186 DAIAFACEVA-DTKPLPRA---RDKVAQ-ADPEAVAAFKKDNAKRFRGFEAP--AANIAC 238
Query: 245 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRG 304
++ +G G+ E + F +L+M S H+FFA+R +K+ + D + R
Sbjct: 239 VEKATDGSSFD--EGIAFERQEFMKLMMGVQSAAQRHIFFAERQAAKIDGI-DPKIPLRE 295
Query: 305 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 364
+++V VIG G MG GI+ + I V + E+ E L +G TI N +G+L +
Sbjct: 296 IKRVGVIGAGTMGGGISMNFLSAGIPVTIVEMAQEALDRGAATIRKNYEASAAKGRLKPE 355
Query: 365 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 424
+ A+ L D+ D D++IEAV E++ +K++IF+ L+ P ILA+NTS +D
Sbjct: 356 QVEQAMGALTPTFDFEALADCDLIIEAVYENMDVKKEIFTRLDAIAKPGAILASNTSYLD 415
Query: 425 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 484
++ + T ++G HFFSPA+VM LLE+VR +T V+ +M + K I+KV VV G
Sbjct: 416 IDEIASVTKRPGDVVGMHFFSPANVMKLLEVVRGAQTEDDVLATVMALSKTIRKVAVVAG 475
Query: 485 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATS 544
C GF NR P A L+ G +ID +FG+P+GPFQ+ DLAG +
Sbjct: 476 VCDGFIGNRMLKPRQVEAMKLLMEGATPEQIDKVHVAFGMPMGPFQMSDLAGVDIGWHRD 535
Query: 545 KEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLS 604
P+R + D L GR G+ GKG Y Y++ P P V IIE+ R S
Sbjct: 536 -------PNRI--ENIRDALAAEGRWGQKTGKGFYDYDEKRNPTPSARVAEIIEDFRSKS 586
Query: 605 NIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGI 664
N+ + ++++EIVE L+ +VNE +LEE + RASD+D + G +P YRGG
Sbjct: 587 NL----QKREISDQEIVEKTLYTMVNEGALILEEKMAQRASDIDVVWIYGYGWPVYRGGP 642
Query: 665 VFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+FWAD G + L+K + F + L+ +A G
Sbjct: 643 MFWADTEGLKTIVAGLEK------HGFAVAELLKSKAESG 676
>gi|158257028|dbj|BAF84487.1| unnamed protein product [Homo sapiens]
Length = 723
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 242/724 (33%), Positives = 387/724 (53%), Gaps = 53/724 (7%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
++ +A+I L NPPVNA++ ++ +K+ ++A +KAIV+ G G+FS G DI F
Sbjct: 8 HNALALIRLRNPPVNAISTTLLRDIKEGLQKAVIDHTIKAIVICGAEGKFSAGADIRGFS 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
G +++ VV+ I+ +KP+VAA++G+A GGGLELA+GCH RIA + Q+
Sbjct: 68 APRTFG-------LTLGHVVDEIQRNEKPVVAAIQGMAFGGGLELALGCHYRIAHAEAQV 120
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS---EE 185
GLPE+TLG++PG TQ LPRL G+ A++++ + I ++E KLG++D VV S EE
Sbjct: 121 GLPEVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVVNSDPVEE 180
Query: 186 LLKVS-RLWALDIAARR---KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 241
++ + R+ + +RR KP I+SL D + SEA L+ ++ P
Sbjct: 181 AIRFAQRVSDQPLESRRLCNKP-IQSLPNMDSI--FSEAL-------LKMRRQHPGCLAQ 230
Query: 242 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 301
+AC+ ++ + + G+ KE ++F L+ +R L + FF +R +K + K
Sbjct: 231 EACVRAVQAAVQYPYEVGIKKEEELFLYLLQSGQARALQYAFFTERKANKWSTPSGASWK 290
Query: 302 ---PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTR 358
R V V V+G G MG GI + I V+ + + L K I + + ++
Sbjct: 291 TASARPVSSVGVVGLGTMGRGIVISFARARIPVIAVDSDKNQLATANKMITSVLEKEASK 350
Query: 359 GKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 418
+ + + L + E VD+VIEAV E + LK+++F+EL C P L T
Sbjct: 351 MQQSGHPWSGPKPRLTSSV--KELGGVDLVIEAVFEEMSLKKQVFAELSAVCKPEAFLCT 408
Query: 419 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKK 478
NTS +D++ + T +IG HFFSPAHVM LLE++ ++ +S I +M + K IKK
Sbjct: 409 NTSALDVDEIASSTDRPHLVIGTHFFSPAHVMKLLEVIPSQYSSPTTIATVMNLSKKIKK 468
Query: 479 VPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYG 538
+ VVVGNC GF NR PY A L+ G +D + FG +GPF++ DLAG
Sbjct: 469 IGVVVGNCFGFVGNRMLNPYYNQAYFLLEEGSKPEEVDQVLEEFGFKMGPFRVSDLAGLD 528
Query: 539 VAAATSKEFDKAFP------------DRSFQSPLVDLLLKSGRNGKANGKGLYTYEK--G 584
V + K P +R + P+ D+L + GR G+ GKG Y Y+K G
Sbjct: 529 VGWKSRKGQGLTGPTLLPGTPARKRGNRRY-CPIPDVLCELGRFGQKTGKGWYQYDKPLG 587
Query: 585 SKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRA 644
KPDP + + R+ +I +P ++++ EI+E L+ ++NE+ R+L EGI
Sbjct: 588 RIHKPDPWLSKFLSRYRKTHHI----EPRTISQDEILERCLYSLINEAFRILGEGIAASP 643
Query: 645 SDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF--FKPSRFLEERAT 702
+D + G +P ++GG +F+A VG V L+K+ + + +PS +L++ A+
Sbjct: 644 EHIDVVYLHGYGWPRHKGGPMFYASTVGLPTVLEKLQKYYRQNPDIPQLEPSDYLKKLAS 703
Query: 703 KGIP 706
+G P
Sbjct: 704 QGNP 707
>gi|420251826|ref|ZP_14754984.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia sp. BT03]
gi|398056833|gb|EJL48814.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia sp. BT03]
Length = 706
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 233/699 (33%), Positives = 373/699 (53%), Gaps = 19/699 (2%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+ ++T+ NPPVNAL + L+D + A DV A++L G G F GG DI F
Sbjct: 18 ILVVTVDNPPVNALGANVRRQLRDAIQAAEKDPDVDAVLLVGAGRNFIGGADIREF---- 73
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G L P S+ V N IE C+KP+VAA+ G ALGGGLE+A+ H RIA +LGLP
Sbjct: 74 --GKPPLPP--SLPEVCNSIEACRKPVVAAIHGAALGGGLEVALAAHYRIALGAARLGLP 129
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 191
E+TLG++PG TQR PRLVG A+++ML + + ++E LGL+D V ++++L
Sbjct: 130 EVTLGLLPGAGGTQRAPRLVGAKAALDLMLSGRHVGAKEAHALGLVDLVGETDDVLAEGF 189
Query: 192 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 251
+ + + P +R D L + +R ++ AR + K + + +D ++
Sbjct: 190 AYVQALLDAQAP-VRRTRDADGLADRAASRANIEAARAETSKKSHGLFSPLKIVDAVQAA 248
Query: 252 IVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVI 311
+ G+ E ++F + + GL+H F A+R K P + KPR + V V+
Sbjct: 249 LELPFDDGLRHERQLFLQCLDSPQRAGLIHAFLAEREVLKAPETRNA--KPRKIASVGVV 306
Query: 312 GGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALK 371
GGG MG+GIA A + + V + E + L +G+ IE L+ +G++T + L
Sbjct: 307 GGGTMGAGIAVAVLDAGLPVTMIERDDVSLARGLAHIEKVYDNLIAKGRMTPEAKAAVLA 366
Query: 372 MLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEK 431
G Y D+VIEAV E + +K +F++L++ C P +LATNTS +D++ +
Sbjct: 367 RWNGSTSYDALGTADLVIEAVFEEMTVKHAVFAKLDRVCKPGAVLATNTSYLDIDAIAAS 426
Query: 432 TSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAV 491
S ++G HFFSPA++M LLE+V + SA V+ + K ++KVPV G C GF
Sbjct: 427 VSRPGDVVGLHFFSPANIMKLLEVVVPAQVSADVVATAFDLAKKLRKVPVRAGVCDGFIG 486
Query: 492 NRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAF 551
NR Y +A ++ G ++ID A+R+FG P+GPFQ+ DLAG + AT K
Sbjct: 487 NRVLAIYRAAADHMMEDGASPYQIDRAVRAFGFPMGPFQVADLAGGDIGWATRKRRAATR 546
Query: 552 PDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKP-KPDPSVLPIIEECRRLSNIMPGG 610
+ + D + + G G+ G+G Y Y G++ PDP V II+ R + + P
Sbjct: 547 DPQQRYVQIADRICERGWFGQKTGRGYYVYADGARTGNPDPEVESIIDAERERAGVTPR- 605
Query: 611 KPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADA 670
+++EI+ + ++NE V+ + I +R D+D + G FP +RGG + +AD
Sbjct: 606 ---EFSDEEIMRRYMAAMINEGANVVHQRIALRPLDVDVTFLYGYGFPRHRGGPMQYADT 662
Query: 671 VGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSA 709
VG + V +++++Q F++PS + + +G L++
Sbjct: 663 VGLDKVLADIREFAQQDPVFWQPSPLIVDLVERGATLAS 701
>gi|410612697|ref|ZP_11323773.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola psychrophila 170]
gi|410167810|dbj|GAC37662.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola psychrophila 170]
Length = 698
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 252/711 (35%), Positives = 398/711 (55%), Gaps = 36/711 (5%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVK-AIVLTGNGGRFSGGFDINVFQKV 73
+ +I L NPPVNAL+ + +G++D +A +DD A+VL G F G DI+ F
Sbjct: 12 IGVIRLNNPPVNALSHALRSGIQDAVTQA--QDDASLALVLMCEGRTFIAGADISEF--- 66
Query: 74 HGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGL 133
G ++P + L+V +E KKPI+AA+ G ALGGGLE A+ CH R A P Q+GL
Sbjct: 67 ---GKPPMLPSLPELLIV--LEASKKPIIAAIHGTALGGGLETALACHYRCALPSAQVGL 121
Query: 134 PELTLGVIP---GTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVS 190
PE+ LG++P GTQR+PRL G+ A+++M I + + +GLID VV +LL +
Sbjct: 122 PEVKLGLLPGAGGTQRVPRLTGVKAALDLMTTGAPIAAAQALNIGLIDKVVEG-DLLSAA 180
Query: 191 RLWALDIAARRKPWIR-SLHRTDKLGS----LSEAREVLKLARLQAKKTAPNMPQHQACL 245
+A ++ A+ R S DK + +E R+ L RL+ ++ AP+ +
Sbjct: 181 LDFANEVIAQGAELKRVSDLEVDKTTASAEFFAEYRKTLS-KRLRGQE-APHR-----IV 233
Query: 246 DVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRG 304
+ IE + G+ E ++F E + S L H+FFA+R +SKV ++ D LK
Sbjct: 234 ECIEAALNTPFDEGLKVERRLFVECMQSSQSGALQHMFFAERMSSKVKDLPKDTQLKD-- 291
Query: 305 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 364
+++V +IGGGLMG GIA + I V L E++ E L +G I N V++GKLT +
Sbjct: 292 IKRVGIIGGGLMGGGIAMNFVNVGIPVTLLEISQEALQRGKDLIAKNYAMTVSKGKLTVE 351
Query: 365 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 424
A M+ G DY++ D+D+VIEAV E++ +K+++F++L+ C ILA+NTS D
Sbjct: 352 LATQRQDMITGTTDYNDLADMDLVIEAVFENLDIKKQVFAKLDNVCKQGAILASNTSYQD 411
Query: 425 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 484
+N++ + TS +IG HFFSPA+VM LLEIVR + TS +V+ M + K IKKVP +
Sbjct: 412 VNLIAQSTSRPQDVIGLHFFSPANVMKLLEIVRGDETSDEVVATSMAIAKSIKKVPALSR 471
Query: 485 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATS 544
C GF NR Y++ A+L + G ID+ ++ FG+ +GP + DLAG +
Sbjct: 472 VCYGFIGNRMLRHYAREAQLCLLEGSTPQNIDAVMQKFGMAMGPLAVGDLAGIDIGYKAR 531
Query: 545 KEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKP-DPSVLPIIEECRRL 603
+ + D L + GR G+ G G Y Y+ ++ + DP V+ +IE +
Sbjct: 532 EGLTDEQKGDVRTYCIADALYEMGRLGQKTGAGYYQYDPETRQRSVDPVVMEVIEAQAKK 591
Query: 604 SNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGG 663
+ + +++K I++ + F ++NE ++LEEGI R SD+D G FP+YRGG
Sbjct: 592 RGV----ERKVISDKTILDRLTFALINEGFKILEEGIAQRPSDIDVVYAFGYGFPAYRGG 647
Query: 664 IVFWADAVGANYVYTSLKKWSQLYG-NFFKPSRFLEERATKGIPLSAPVSS 713
+F+AD +G +Y ++ +++ YG F++P+ L++ +G L+ +S
Sbjct: 648 PMFYADTIGLEKIYHTVCEFADTYGEEFWQPAALLKQLVEEGKTLTQWANS 698
>gi|386856885|ref|YP_006261062.1| 3-hydroxyacyl-CoA dehydrogenase [Deinococcus gobiensis I-0]
gi|380000414|gb|AFD25604.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein [Deinococcus
gobiensis I-0]
Length = 692
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 250/705 (35%), Positives = 371/705 (52%), Gaps = 42/705 (5%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+ ++T+ NPPVNA + + GL + A + DV+A+V+ G G F G DI F
Sbjct: 12 ILVLTINNPPVNAFSPGVPEGLHAGLDAAEADGDVRAVVIIGGGRTFIAGADIKTF---- 67
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
D+ + + ++ KP VAA+ G ALGGGLE+A+ C R+A +LGLP
Sbjct: 68 ---DLPREQAPDLRGFITRLDAFSKPTVAAIHGTALGGGLEVALACTYRVATADARLGLP 124
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 191
E+ LGV+PG TQRLPR+VG KA+EMML S+ + E LGL+D VV + L+ S
Sbjct: 125 EVKLGVLPGAGGTQRLPRVVGAQKALEMMLSGSSVKATEARTLGLVDEVVDGD--LRAS- 181
Query: 192 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 251
A++ A R R L R G + E+ AR KT +D+ E
Sbjct: 182 --AVEFA-RAHADARPLPRISGRGVEGASPELFAAARAGLGKTHKGQYSPGLIVDLAEMA 238
Query: 252 IVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV---TDIGLKPRGVRKV 308
G EA++F + SR L HVFFA+R KV + T +G VR+V
Sbjct: 239 ATKPFAEGWDAEAQLFMQAKDSPQSRALRHVFFAEREAGKVRGLGKDTPVG----DVRRV 294
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
+IG G MG GIA + + V + E + L +G+ TI N +G+LT D+
Sbjct: 295 GIIGAGTMGGGIAMNFLNVGLPVTIVETAQDALDRGLATIRRNYENSAKKGRLTGDEVEK 354
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
+ +L LD D D++IEAV E++ +K+ IF+ L+ P ILA+NTST+++N +
Sbjct: 355 RMGLLTPTLDMGALADADLIIEAVFENMDVKKDIFTRLDAVAKPGAILASNTSTLNVNEI 414
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
T+ +++IG HFFSPA+VM LLEIVR ++TS V+ + V + I KV VVVG C G
Sbjct: 415 AAVTARPEQVIGLHFFSPANVMKLLEIVRADKTSDTVLATSLAVARKIGKVGVVVGVCDG 474
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLA----GYGVAAATS 544
F NR Y AR LV G D +D+A+ + GLP+GPF++ D+A GY + +
Sbjct: 475 FVGNRMVHRYGDEARKLVEEGADPQAVDAAMHALGLPMGPFEMSDMAGLDIGYAIRQHQA 534
Query: 545 KEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLS 604
KE + PD +D ++++GR G+ G G+Y Y +P+P+ + +I + R
Sbjct: 535 KERGEPKPD-----GWLDRIVETGRKGQKTGGGIYDYGDDRRPRPNAEMGQLIADYRAEK 589
Query: 605 NIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGI 664
+ P + + EI + + + +VNE ++LEEGI RA D+D + G FP+YRGG
Sbjct: 590 GLT----PREIGQDEITKRLAYSLVNEGAQILEEGIAQRAGDIDVIYLYGYGFPAYRGGP 645
Query: 665 VFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSA 709
+ +A G V L+K+ Q P+ L A +G +A
Sbjct: 646 MGYASEQGLGNVAADLEKYGQ------TPAPLLRRLADEGQTFAA 684
>gi|294010368|ref|YP_003543828.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingobium japonicum UT26S]
gi|292673698|dbj|BAI95216.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingobium japonicum UT26S]
Length = 689
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 246/699 (35%), Positives = 367/699 (52%), Gaps = 34/699 (4%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVNAL+ + GL+ + E+A ++V AI+L G F G DI F +
Sbjct: 11 DGVALITLDNPPVNALSASLRQGLQAELEQAFGDEEVGAILLLCAGRTFIAGADITEFGQ 70
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+PD+ +++ KP++AA+ G ALGGG ELA+ CH R+AA ++G
Sbjct: 71 PW---QPPSLPDLCA-----MLDGAPKPVIAAIHGTALGGGFELALACHYRVAARSAKVG 122
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 189
LPE+ LG++PG TQR+PR+VG A++++ + I + E LGL+DAVV L +
Sbjct: 123 LPEVHLGLLPGAGGTQRVPRIVGAEAALDIITSGRQIKAAEALSLGLVDAVVDDAALAEE 182
Query: 190 SRLWALDIAAR--RKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDV 247
+ +A + A KP IR R D + E+ + A +
Sbjct: 183 ALAFARRVVADGGAKPRIRD--RADAIEGDRNRPELFTAFAAANARRFKGFVAPAAIIGA 240
Query: 248 IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIG--LKPRGV 305
+E + G+ KE +F+ LV S HVFFA+R ++VP DIG + +
Sbjct: 241 VEAAVTLPFDEGLAKETALFERLVASPESAAQRHVFFAEREAARVP---DIGPDISAIDI 297
Query: 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDK 365
R V VIG G MG GI + I + L E E L +GI TI N +G++T +
Sbjct: 298 RSVGVIGAGTMGGGITMNFLNAGIPITLVETTQEALDRGIATIRRNYETTAAKGRMTAAQ 357
Query: 366 ANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL 425
+ ++ LD + D D++IEAV ES+ +K IF+ L++ ILA+NTS +DL
Sbjct: 358 VEQRMGLISPSLDLAALADADLIIEAVYESMDVKTDIFARLDRIAKLGAILASNTSFLDL 417
Query: 426 NIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 485
N + TS + ++G HFFSPA+VM LLE+VR TS V+ M + K I KV V+ G
Sbjct: 418 NRIAAATSRPEWVVGLHFFSPANVMRLLEVVRGAATSKPVVATAMRLAKRIGKVAVLSGV 477
Query: 486 CTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSK 545
C GF NR P A ++ G + ID + +G +G FQ++DL G V +
Sbjct: 478 CDGFIANRLLAPRGAQAEAMMLEGTPIAEIDRVLVDYGFAMGHFQMMDLVGLDVIGRNAT 537
Query: 546 EFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSN 605
E R+ LV +GR G+ G G Y Y++ + +P +I+E
Sbjct: 538 E-------RTVMGDLV----AAGRLGQKRGAGYYDYDEKRRSRPSDVTGSLIKEVAAARG 586
Query: 606 IMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIV 665
+ P S E ++ +L+PVVNE ++LEEGI +RASD+D A+VLG ++P YRGG +
Sbjct: 587 V--AHAPTSGDEA-LLARLLYPVVNEGAKILEEGIALRASDIDIAAVLGYNWPVYRGGPL 643
Query: 666 FWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
FWAD VG + + +++ ++G F+P+ L A G
Sbjct: 644 FWADQVGLDRIVAEMRRLEAVHGETFRPAPLLVRLAEAG 682
>gi|407779694|ref|ZP_11126947.1| enoyl-CoA hydratase [Nitratireductor pacificus pht-3B]
gi|407298464|gb|EKF17603.1| enoyl-CoA hydratase [Nitratireductor pacificus pht-3B]
Length = 690
Score = 374 bits (960), Expect = e-100, Method: Compositional matrix adjust.
Identities = 259/700 (37%), Positives = 366/700 (52%), Gaps = 33/700 (4%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DGVA+I L NPPVNAL + A L E A + + V+ IV+ G F G DI+ F
Sbjct: 10 EDGVAVIVLDNPPVNALGHALRAPLFAALEAAKADEAVQGIVIACAGRTFVAGADISEF- 68
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
G L P S+ ++ L+E +KP VAA+ G ALGGGLELA+GCH R+A +
Sbjct: 69 -----GKPPLEP--SLPDLIALLESIEKPTVAAIHGTALGGGLELALGCHYRVADRAAMI 121
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
GLPE+ LG+IPG T RLPRLVG A+ +++ K + E+ LG +DAV + L+
Sbjct: 122 GLPEVNLGLIPGAGGTVRLPRLVGPEAALGIIVSGKPVGMEKAQALGAVDAVADGD--LR 179
Query: 189 VSRLWALDIA-ARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDV 247
+ + L A P R +KL +A E A A K A + +
Sbjct: 180 AAAMAFLRAKIAEDGPHRHIRARDEKLAVDLDAFEA---AVADATKKARGLTAPLTAAEA 236
Query: 248 IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT-DIGLKPRGVR 306
+ I + +E ++F E S H+FFA R +KVP + D +P +
Sbjct: 237 VRNAITMAFDDALARERELFLERRDSLESAAQRHLFFATREATKVPGIARDTQARP--IE 294
Query: 307 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 366
K AVIG G MG+GIA A I V L E+N+E L +G+ I+ G V RG + +
Sbjct: 295 KAAVIGAGTMGAGIAMALANGGIEVRLLELNAEALERGLGQIDKTYAGSVKRGSIDAAEK 354
Query: 367 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 426
L + G DY+ D D+ IEAV E + +K K+F L+K P ILA+NTS +DL+
Sbjct: 355 EARLARISGTTDYAALSDCDIAIEAVFEDMGVKHKVFGALDKVMKPGAILASNTSYLDLD 414
Query: 427 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 486
+ T ++G HFFSPAHVM LLEIVR + T+ +V+ + + + I KVPVVVG C
Sbjct: 415 EIAASTGRPQDVVGLHFFSPAHVMRLLEIVRGDHTAPEVLASALALARRIGKVPVVVGVC 474
Query: 487 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKE 546
GF NR + L+ G ++D FG P+GPF ++DLAG ++ +
Sbjct: 475 NGFVGNRMLAARREENESLLLSGATPEQVDRVFADFGWPMGPFAMVDLAGLDISWKHRQS 534
Query: 547 FDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSN 605
+P+ D L ++G G+ G+G Y YE GS+ PKPDP V +IE R+
Sbjct: 535 L-------GLTAPVADALCEAGHFGQKAGRGFYLYEDGSRTPKPDPFVAELIE--RKADE 585
Query: 606 IMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIV 665
+ G + +V +EI E L+P++NE R++EEGI RASD+D V G FP +GG +
Sbjct: 586 L--GIERRTVGAEEITERTLYPMINEGARIVEEGIAARASDVDVVWVNGYGFPVAKGGPM 643
Query: 666 FWADAVGANYVYTSLKKWSQLYG-NFFKPSRFLEERATKG 704
FWA+ G + L+ W G FKP+ L + A G
Sbjct: 644 FWAEHFGIGRIVDRLEHWYGETGKEVFKPAPLLRQLALTG 683
>gi|338983485|ref|ZP_08632674.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding [Acidiphilium sp. PM]
gi|338207592|gb|EGO95540.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding [Acidiphilium sp. PM]
Length = 698
Score = 374 bits (960), Expect = e-100, Method: Compositional matrix adjust.
Identities = 259/713 (36%), Positives = 378/713 (53%), Gaps = 38/713 (5%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR 60
M+ +V +E+ N GVA+I++ NPPVNAL + AGL ++ A + V+AIVL G
Sbjct: 1 MSEQKVGLEIAN-GVAVISIDNPPVNALGHAVRAGLVEQLAAAEADASVRAIVLACKGRT 59
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
FS G DI F K A + V+ ++C+KP++AA+ G LGGGLELA+GC
Sbjct: 60 FSAGADITEFGKPPRA--------PGLHEVIERFDNCRKPVIAALFGTTLGGGLELALGC 111
Query: 121 HARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 177
H R+A ++GLPE+ LG++PG TQRLPRL+G KA+ ++ K I ++ GLI
Sbjct: 112 HYRVAVESARMGLPEVKLGLLPGAGGTQRLPRLIGPEKAVAAIVSGKMIGAKAALADGLI 171
Query: 178 DAVVTSEELLKVSRLWALDIAARRKP--WIRSLHRTDKLGSLSEAREVLKLARLQAKKTA 235
DA+V+ A+D A P +R R+DK+ + + A +A K
Sbjct: 172 DAIVSD------PVQGAIDFAHTVDPAKLVRVRDRSDKIAAAKADPSAFEAAAAEATKRL 225
Query: 236 PNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV 295
+ AC++ + G E + F LV+ D SR HVFFA+R K+P
Sbjct: 226 KGVEAPAACVEAVRNSFTLPFDEGARAEQQAFMRLVVGDQSRAQRHVFFAEREAQKIPG- 284
Query: 296 TDIGLKPRGVR--KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVR 353
IG + +G + + VIGGG MG GIA I V + E + L +G+ +
Sbjct: 285 --IGPEVKGAKIGRAVVIGGGTMGGGIAMNFANAGIPVTIVETDEAALARGLDRVRGTYD 342
Query: 354 GLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPH 413
V RG L + M G D+ + D+VIEAV E + LK+++F+ L+ P
Sbjct: 343 VSVQRGALPAGTTEKRMAMFSGSTDWGVIAEADIVIEAVFEELGLKKEVFARLDGIARPG 402
Query: 414 CILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVG 473
+LATNTST+D++ + T ++G HFFSPA+VM LLEIVR + +SAQ I + VG
Sbjct: 403 ALLATNTSTLDVDAIAAATKRPGDVLGMHFFSPANVMKLLEIVRGKESSAQSIATAIAVG 462
Query: 474 KIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLD 533
K + KVPVVVGNC GF NR + L+ G ++D+ +++FG P+GPF + D
Sbjct: 463 KTLGKVPVVVGNCDGFVGNRMLARRTIECERLMLEGALPQQVDAVVKAFGFPMGPFAMGD 522
Query: 534 LAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPS 592
LAG V K R +P+ D L + GR G+ G+G Y YE GS+ P PDP
Sbjct: 523 LAGLDVGWRIRKH-------RGATAPVSDALCEMGRFGQKTGRGYYIYENGSRVPTPDPE 575
Query: 593 VLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASV 652
V +I E G +++++EI+E + +P++NE+ R+LEEGI +R SD+D V
Sbjct: 576 VEALISE----KAAALGVTRRAISDQEILERMTYPMINEAARILEEGIAIRPSDVDVVWV 631
Query: 653 LGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN-FFKPSRFLEERATKG 704
G +P +RGG F AD VG + L+ ++ G+ P L A G
Sbjct: 632 YGYGWPVWRGGPCFHADLVGLKEIAARLEHYATAVGDETLAPCALLRRLADAG 684
>gi|326402430|ref|YP_004282511.1| putative fatty acid oxidation complex alpha subunit [Acidiphilium
multivorum AIU301]
gi|325049291|dbj|BAJ79629.1| putative fatty acid oxidation complex alpha subunit [Acidiphilium
multivorum AIU301]
Length = 698
Score = 374 bits (960), Expect = e-100, Method: Compositional matrix adjust.
Identities = 258/713 (36%), Positives = 379/713 (53%), Gaps = 38/713 (5%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR 60
M+ +V +E+ N GVA+I++ NPPVNAL + AGL ++ A + V+AIVL G
Sbjct: 1 MSEQKVGLEIAN-GVAVISIDNPPVNALGHAVRAGLVEQLAAAEADASVRAIVLACKGRT 59
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
FS G DI F K A + V+ ++C+KP++AA+ G LGGGLELA+GC
Sbjct: 60 FSAGADITEFGKPPRA--------PGLHEVIERFDNCRKPVIAALFGTTLGGGLELALGC 111
Query: 121 HARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 177
H R+A ++GLPE+ LG++PG TQRLPRL+G KA+ ++ K I ++ GLI
Sbjct: 112 HYRVAVESARMGLPEVKLGLLPGAGGTQRLPRLIGPEKAVAAIVSGKMIGAKAALADGLI 171
Query: 178 DAVVTSEELLKVSRLWALDIAARRKP--WIRSLHRTDKLGSLSEAREVLKLARLQAKKTA 235
DA+V+ A+D A P +R R+DK+ + + A +A K
Sbjct: 172 DAIVSD------PVQGAIDFAHTVDPAKLVRVRDRSDKIAAAKADPSAFEAAAAEATKRL 225
Query: 236 PNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV 295
+ AC++ + G E + F LV+ D SR HVFFA+R K+P
Sbjct: 226 KGVEAPAACVEAVRNSFTLPFDEGARAEQQAFMRLVVGDQSRAQRHVFFAEREAQKIPG- 284
Query: 296 TDIGLKPRGVR--KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVR 353
IG + +G + + VIGGG MG GIA I V + E + L +G+ +
Sbjct: 285 --IGPEVKGAKIGRAVVIGGGTMGGGIAMNFANAGIPVTIVETDEAALSRGLDRVRGTYD 342
Query: 354 GLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPH 413
V RG L + + G D+ + D+VIEAV E + LK+++F+ ++ P
Sbjct: 343 VSVQRGALPAGTTEKRMALFSGSTDWGVMAEADIVIEAVFEELGLKKEVFARIDGIARPG 402
Query: 414 CILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVG 473
+LATNTST+D++ + T ++G HFFSPA+VM LLEIVR + +SAQ I + VG
Sbjct: 403 ALLATNTSTLDVDAIAAATKRPGDVLGMHFFSPANVMKLLEIVRGKESSAQSIATAIAVG 462
Query: 474 KIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLD 533
K + KVPVVVGNC GF NR + L+ G ++D+ +++FG P+GPF + D
Sbjct: 463 KTLGKVPVVVGNCDGFVGNRMLARRTIECERLMLEGALPQQVDAVVKAFGFPMGPFAMGD 522
Query: 534 LAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPS 592
LAG V K R +P+ D L + GR G+ G+G Y YE GS+ P PDP
Sbjct: 523 LAGLDVGWRIRKH-------RGATAPVSDALCEMGRFGQKTGRGYYIYENGSRVPTPDPE 575
Query: 593 VLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASV 652
V +I E I +++++EI+E + +P++NE+ R+LEEGI +R SD+D V
Sbjct: 576 VEALISEKATALGIT----RRAISDQEILERMTYPMINEAARILEEGIAIRPSDVDVVWV 631
Query: 653 LGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN-FFKPSRFLEERATKG 704
G +P +RGG F AD VG + L+ ++Q G+ P L A G
Sbjct: 632 YGYGWPVWRGGPCFHADLVGLKEIAARLEHYAQAVGDETLAPCALLRRLAAAG 684
>gi|390576846|ref|ZP_10256891.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia terrae BS001]
gi|389931084|gb|EIM93167.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia terrae BS001]
Length = 707
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 244/701 (34%), Positives = 360/701 (51%), Gaps = 23/701 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+ ++T+ NPPVNAL + + GL E A + V+A+++ G G F G DI F K
Sbjct: 19 ILLVTIDNPPVNALGVDVRRGLVAAIEAAEANQAVRAVLIVGAGRNFIAGADIREFGK-- 76
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
+PDV N IE C KP+V A+ G ALGGGLE+A+ H RIA +LGLP
Sbjct: 77 -PPQTPTLPDV-----CNRIETCDKPVVVAIHGAALGGGLEIALASHYRIAVAGAKLGLP 130
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 191
E+ LG++PG TQR PRL+G A+ +ML K I +E K+GL+D V S+++L
Sbjct: 131 EVLLGLLPGAGGTQRAPRLIGAEAALSLMLSGKHIGEQEALKIGLVDRVGQSDDVLAEGL 190
Query: 192 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 251
+ + P +R L A + AR K + + +D +E
Sbjct: 191 AYVQQLLVEHAP-VRRTRDAQALSDKEAATAAVTTARADTAKKSRGLLSPLKIVDCVEAA 249
Query: 252 IVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVI 311
+ G+ E K F E + LVH F A+R K P +PR + V+
Sbjct: 250 LNLPFDDGLRFERKQFLECLDSPQRAALVHAFQAEREVQKAPETRRA--QPRPIASAGVV 307
Query: 312 GGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALK 371
GGG MG+GIA A + + V + E + E L +G IE GL+ +G+LT D L
Sbjct: 308 GGGTMGAGIAVALLDAGLPVTMIERDDESLARGRAHIEKVYDGLIAKGRLTSDAKAKKLA 367
Query: 372 MLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEK 431
G Y DVD+VIEAV E + +KQ +F+EL++ C +LATNTS +D++ +
Sbjct: 368 RFIGSTSYEALADVDIVIEAVFEDMAVKQAVFAELDRVCKQGAVLATNTSYLDIDAIAAS 427
Query: 432 TSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAV 491
S +IG HFFSPAH+M LLE+V SA V+ + K ++KVPV G C GF
Sbjct: 428 MSRPQDVIGLHFFSPAHIMKLLEVVVPAHVSADVVATSFDLAKKLRKVPVRAGVCDGFIG 487
Query: 492 NRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAF 551
NR Y +A L+ G ++ID A+R FG P+GP+Q++DLAG + AT K
Sbjct: 488 NRMLAVYRAAADHLMEDGASPYQIDKAVREFGFPMGPYQVIDLAGGDIGWATRKRRAATR 547
Query: 552 -PD-RSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKP-KPDPSVLPIIEECRRLSNIMP 608
PD R Q P D L + G G+ +G Y Y++G + PD V II R + + P
Sbjct: 548 NPDARYVQIP--DRLCERGWFGQKTKRGFYRYDEGKRAGTPDAEVEAIIVAERERAGVTP 605
Query: 609 GGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWA 668
+ ++++IV + ++NE V+ E I +R D+D + G FP+YRGG + +A
Sbjct: 606 R----TFSDEQIVRRYMAAMINEGANVIHERIALRPLDVDVTLINGFGFPAYRGGPMHYA 661
Query: 669 DAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSA 709
D + + ++++ + F+KPS L E +G L++
Sbjct: 662 DTISLPALLADIREFEKQDPLFWKPSPLLVELVERGETLAS 702
>gi|374367960|ref|ZP_09626016.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Cupriavidus basilensis
OR16]
gi|373100473|gb|EHP41538.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Cupriavidus basilensis
OR16]
Length = 693
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 244/697 (35%), Positives = 367/697 (52%), Gaps = 33/697 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+AI+TL +PPVNAL+ + G+ D E A + +VK IVL G F G DI F K
Sbjct: 16 IAILTLNSPPVNALSAAVRTGILDGVELAIADSNVKGIVLICAGKTFIAGADITEFGK-- 73
Query: 75 GAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
P V L V IE KP+VAA+ G ALGGGLE+A+ CH R+AA + G
Sbjct: 74 --------PPVGPALADVQAAIEGSPKPVVAAIHGTALGGGLEVALVCHYRVAARSAKCG 125
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 189
LPE+ LG++PG TQRLPR+VG +KA++M+ I + ++GL D V L
Sbjct: 126 LPEVNLGLLPGAGGTQRLPRIVGPAKALDMVTSGAHIGAAAAAEMGLFDLVTDDAALRAD 185
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVL-KLARLQAKK-TAPNMPQHQACLDV 247
+ + + A ++P + +K+ + E+ R A+K + P++ +
Sbjct: 186 AIAFVKQVNAEQRPLRKVRDLNEKVEAARGKPELFADFRRANARKFRGFDAPEYN--IRC 243
Query: 248 IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRK 307
IE + G+ E K+F L+ S + FFA R +P+V V+K
Sbjct: 244 IEAAVNLPFDEGMKVERKLFLALMNGTQSAAQRYYFFASRQVWNLPDVP-ADTPTIDVKK 302
Query: 308 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 367
V +IG G MG GIA + + VV+ E E L +G++TI AN ++G++T +
Sbjct: 303 VGIIGAGTMGGGIAMNLLNAGVPVVIVETAQEALDRGMRTIRANYDNTASKGRITAADVD 362
Query: 368 NALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 427
+ +L L+ + D D+VIEAV E++ +K+ IF +L+K ILATNTS +D+N
Sbjct: 363 KRMALLTPTLELGQLADADLVIEAVYENMDVKKDIFGKLDKIVKRGAILATNTSALDVNE 422
Query: 428 VGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 487
+ TS + +IG HFFSPA+VM LLE+VR ++TS VI M + + I K+ +VG C
Sbjct: 423 IAAATSRPESVIGLHFFSPANVMKLLEVVRGDKTSKPVIRTSMELARKIGKIAALVGVCP 482
Query: 488 GFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEF 547
GF NR + A+ LV G + ID + +FG P+GPF + DLAG + K
Sbjct: 483 GFVGNRMLAQRQREAQKLVLEGALPWDIDRVLYNFGFPMGPFAMSDLAGLDLGWIREK-- 540
Query: 548 DKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIM 607
S + L ++L + R G+ G G Y Y+ P P++E+ R
Sbjct: 541 -------SSSATLREILCEMDRRGQKTGAGYYDYDDKRNAIPS----PVVEQIIRDFAAR 589
Query: 608 PGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFW 667
G V+E+EI+E ++ ++NE ++LEEG +RASD+D V G +P YRGG +F+
Sbjct: 590 KGMTSRVVSEQEILERCVYTMINEGAKILEEGKAIRASDIDVVWVNGYGWPVYRGGPMFY 649
Query: 668 ADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
AD +G + V ++K + G FKP+R LE+ +G
Sbjct: 650 ADTIGLDKVLAAMKNFEATLGADFKPARLLEDLVAQG 686
>gi|449471586|ref|XP_004153352.1| PREDICTED: glyoxysomal fatty acid beta-oxidation multifunctional
protein MFP-a-like, partial [Cucumis sativus]
Length = 332
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/317 (57%), Positives = 241/317 (76%), Gaps = 3/317 (0%)
Query: 85 VSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG- 143
+S++++ ++ E +KP VAA++GLALGGGLE+AM CHAR++ QLGLPEL LG+IPG
Sbjct: 16 ISIDVITDIFEAARKPAVAAIDGLALGGGLEVAMACHARLSTKTAQLGLPELQLGLIPGF 75
Query: 144 --TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARR 201
TQRLPRLVGL KA+EMML SK + EE + LGL+DA+V EEL+ +R WALDI+ RR
Sbjct: 76 GGTQRLPRLVGLPKALEMMLTSKPVKGEEAFSLGLVDAIVPREELISAARKWALDISERR 135
Query: 202 KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVL 261
KPWI SLH+T+KL SL++ARE+ K AR Q +K APN+ C+DV+E G+V G +G+
Sbjct: 136 KPWIISLHKTNKLESLADAREIFKFARAQVRKQAPNLKHPLVCIDVVETGVVSGPRAGLQ 195
Query: 262 KEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIA 321
KE + F+ L+ DTS+ L+HVFFAQR T+KVP V+D+GL PR + KVAVIGGGLMGSGIA
Sbjct: 196 KEIEDFQVLLHADTSKSLIHVFFAQRGTTKVPGVSDLGLTPRRINKVAVIGGGLMGSGIA 255
Query: 322 TAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE 381
TA IL+N V+LKEVN ++L G+ ++AN++ V +G +T +K + +LKGVLDY
Sbjct: 256 TALILSNYPVILKEVNEKFLEAGLGRVKANLQSRVRKGTMTPEKFERTISLLKGVLDYES 315
Query: 382 FKDVDMVIEAVIESVPL 398
FKDVDMVIEAVIE++ L
Sbjct: 316 FKDVDMVIEAVIENISL 332
>gi|390165886|ref|ZP_10218160.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Sphingobium indicum
B90A]
gi|389591183|gb|EIM69157.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Sphingobium indicum
B90A]
Length = 689
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 250/699 (35%), Positives = 371/699 (53%), Gaps = 34/699 (4%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA+ITL NPPVNAL+ P+ GL+ E+A ++V AI+L G F G DI F +
Sbjct: 11 DGVALITLDNPPVNALSAPLRQGLQAGLEQAFGDEEVGAILLLCAGRTFIAGADITEFGQ 70
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+PD+ +++D KP++AA+ G ALGGG ELA+ CH R+AA ++G
Sbjct: 71 PW---QPPSLPDLCA-----MLDDAPKPVIAAIHGTALGGGFELALTCHYRVAARSAKVG 122
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 189
LPE+ LG++PG TQR+PR+VG A+E++ + I + E LGL+DAVV L +
Sbjct: 123 LPEVHLGLLPGAGGTQRVPRIVGTEAALEIITSGRQIKAAEALSLGLVDAVVDDAALAEE 182
Query: 190 SRLWALDIAAR--RKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDV 247
+ +A + A KP IR R D L + + ++ + A ++
Sbjct: 183 ALAFARRVVADGGAKPRIRD--RADALQADRDRPDLFTAFAAAHARRFKGFVAPAAIIEA 240
Query: 248 IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIG--LKPRGV 305
+E + G+ KE +F+ LV S HVFFA+R ++VP DIG + +
Sbjct: 241 VEAAVTLPFEEGLAKETALFERLVASPESAAQRHVFFAEREAARVP---DIGPDISAIDI 297
Query: 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDK 365
R V VIG G MG GI + I V L E + E L +GI TI N +G++T +
Sbjct: 298 RSVGVIGAGTMGGGITMNFLNAGIPVTLVETSQEALDRGIATIRRNYEATAAKGRMTGAQ 357
Query: 366 ANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL 425
+ ++ LD + D D++IEAV ES+ +K IF+ L++ ILA+NTS +DL
Sbjct: 358 VEQRMALISPSLDLAALADADLIIEAVYESMDVKTDIFARLDRIAKAGTILASNTSFLDL 417
Query: 426 NIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 485
N + TS + ++G HFFSPA+VM LLE+VR TS V+ M + K I KV V+ G
Sbjct: 418 NRIAAATSRPEWVVGLHFFSPANVMRLLEVVRGAATSKPVVATAMRLAKRIGKVAVLSGV 477
Query: 486 CTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSK 545
C GF NR P A ++ G + ID + +G +G FQ++DL G V +
Sbjct: 478 CDGFIANRLLAPRGAQAEAMMLEGTPIAEIDRVLVDYGFAMGHFQMMDLVGLDVIGRNAT 537
Query: 546 EFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSN 605
E R+ LV +GR G+ G G Y Y++ + +P +I+E
Sbjct: 538 E-------RTVMGDLV----TAGRLGQKGGAGYYDYDEKRRSRPSDVTDSLIKEVAAARG 586
Query: 606 IMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIV 665
+ P S E ++ +L+PVVNE ++LEEGI +RASD+D A+VLG ++P YRGG +
Sbjct: 587 V--AHAPTSGDEA-LLARLLYPVVNEGAKILEEGIALRASDIDIAAVLGYNWPVYRGGPL 643
Query: 666 FWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
FWAD VG + + +++ ++G F P+ L A G
Sbjct: 644 FWADQVGLDRIVVEMRRLEAVHGETFCPAPLLVRLAEAG 682
>gi|395005834|ref|ZP_10389697.1| 3-hydroxyacyl-CoA dehydrogenase [Acidovorax sp. CF316]
gi|394316158|gb|EJE52894.1| 3-hydroxyacyl-CoA dehydrogenase [Acidovorax sp. CF316]
Length = 707
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 242/701 (34%), Positives = 368/701 (52%), Gaps = 26/701 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+GV ++++ NPPVNAL + GL A + ++A+++ G G F G DI F
Sbjct: 15 QEGVLLVSVDNPPVNALGAAVRQGLLAAIAAAEADAGIRAVLIVGAGRAFIAGADIREFG 74
Query: 72 KVHGAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKT 129
K P V L V IE C KP+VAA+ G ALGGGLE+A+ H R+A P
Sbjct: 75 K----------PPVPPALPEVCQAIEACSKPVVAAIHGAALGGGLEVALSAHYRLALPGA 124
Query: 130 QLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL 186
QLGLPE+ LG++PG TQR PRL+G+ A E+ML K + ++ GL+DAV +
Sbjct: 125 QLGLPEVLLGLLPGSGGTQRAPRLMGVKAATELMLSGKHLNTQAALAAGLVDAVAEGSDP 184
Query: 187 LKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLD 246
+ ++ AR+ P + +L + A+ L + R K A + +D
Sbjct: 185 VAAGLAHVRELLARQAPVRPTSALPGRLADKAAAQAELDVLRADTAKAARGLFSPLKIID 244
Query: 247 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSR--GLVHVFFAQRATSKVPNVTDIGLKPRG 304
++ + G+ E F L LD+ + GL+H FFA+R +KVP PR
Sbjct: 245 CVQAALDLPFDQGMQFERAQF--LACLDSPQRAGLIHAFFAEREVAKVPEAK--AAAPRP 300
Query: 305 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 364
+ +AVIGGG MG+GI + + + V + E + + +G +E LV +G+++ +
Sbjct: 301 ITAIAVIGGGTMGAGITVSALDAGLPVTMIERDEASIARGRAHVEKVYDALVAKGRMSAE 360
Query: 365 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 424
L G Y + D+VIEAV E + +K+ +F EL++ C P +LATNTS +D
Sbjct: 361 AKAATLARYTGSTRYEDIASADLVIEAVFEDIEVKKTVFRELDRVCKPGAVLATNTSYLD 420
Query: 425 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 484
++ + T+ +IG HFFSPA++M LLEIV R SA V+ + K +KKVPV G
Sbjct: 421 IDAIAAATARPQDVIGLHFFSPANIMKLLEIVVPVRVSADVVATAFELAKRLKKVPVRAG 480
Query: 485 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATS 544
C GF NR Y Q+A L+ G + ID+A R FG P+GPFQ+ DLAG + AT
Sbjct: 481 VCDGFIGNRILAVYKQAADYLMEDGASPYEIDAAARGFGYPMGPFQVTDLAGGDIGWATR 540
Query: 545 KEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRL 603
K ++ + D + + G G+ G+G Y Y +G++ + DP VL I++ R
Sbjct: 541 KRRAATRDPKARYVEIADRICERGWFGQKTGRGFYLYPEGARVGQSDPEVLAIVDAERAR 600
Query: 604 SNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGG 663
++P +P S EI+ + +VNE +V+ EGI +R D+D + G FP +RGG
Sbjct: 601 KGVVP--RPFSA--DEIMRRYMAAMVNEGAKVVAEGIALRPLDVDVTFLSGYGFPRHRGG 656
Query: 664 IVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+ WAD G V +++++Q F+KP+ LE+ +G
Sbjct: 657 PMKWADMQGLPQVLADIREFAQDDPLFWKPAALLEQLVAEG 697
>gi|197099993|ref|NP_001127606.1| peroxisomal bifunctional enzyme [Pongo abelii]
gi|75054763|sp|Q5R5M8.1|ECHP_PONAB RecName: Full=Peroxisomal bifunctional enzyme; Short=PBE;
Short=PBFE; Includes: RecName: Full=Enoyl-CoA
hydratase/3,2-trans-enoyl-CoA isomerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|55732475|emb|CAH92938.1| hypothetical protein [Pongo abelii]
Length = 723
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 244/724 (33%), Positives = 387/724 (53%), Gaps = 53/724 (7%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
++ +A+I L NPPVNA++ ++ +K+ ++A +KAIV+ G G+FS G DI+ F
Sbjct: 8 HNALALIRLRNPPVNAISTALLRDIKEGLQKAVIDHTIKAIVICGAEGKFSAGADIHGFS 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
G ++ VV+ I+ +KP+VAA++G+A GGGLELA+GCH RIA + Q+
Sbjct: 68 APRTFG-------FTLGHVVDEIQRNEKPVVAAIQGMAFGGGLELALGCHYRIAHSEAQV 120
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS---EE 185
GLPE+TLG++PG TQ LPRL+G+ A++++ + I ++E KLG++D VV S EE
Sbjct: 121 GLPEVTLGLLPGARGTQLLPRLIGVPAALDLITSGRHILADEALKLGILDKVVNSDPVEE 180
Query: 186 LLKVS-RLWALDIAARR---KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 241
++ + R+ + +RR KP I+SL D + SEA +LK+ R P
Sbjct: 181 AIRFAQRVSDQPLESRRLCNKP-IQSLPNMDTI--FSEA--LLKMRRQH-----PGCLAQ 230
Query: 242 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 301
+AC+ ++ + + GV KE ++F L +R L + F A+R +K + K
Sbjct: 231 EACVRAVQAAVQYPYEVGVKKEEELFLYLFQSGQARALQYAFLAERKANKWSTPSGASWK 290
Query: 302 ---PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTR 358
R V V V+G G MG GI + I V+ + + L K I + + ++
Sbjct: 291 TASARPVSSVGVVGLGTMGRGIVISFARARIPVIAVDSDKNQLATANKMITSVLEKEASK 350
Query: 359 GKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 418
+ + + L + E VD+VIEAV E + LK+++F+EL C P L T
Sbjct: 351 MQQSGHPWSGPKPRLTSSM--KELGGVDLVIEAVFEEMSLKKQVFAELSAICKPEAFLCT 408
Query: 419 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKK 478
NTS +D++ + T +IG HFFSPAHVM LLE++ ++ +S I +M + K IKK
Sbjct: 409 NTSALDVDEIASSTDRPHLVIGTHFFSPAHVMKLLEVIPSQYSSPTTIATVMNLSKKIKK 468
Query: 479 VPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYG 538
+ VVVGNC GF NR PY A L+ G +D + FG +GPF++ DLAG
Sbjct: 469 IGVVVGNCFGFVGNRMLNPYYNQAYFLLEEGSKPEEVDQVLEEFGFKMGPFRVSDLAGLD 528
Query: 539 VAAATSKEFDKAFP------------DRSFQSPLVDLLLKSGRNGKANGKGLYTYEK--G 584
V + K P +R + P+ D+L + GR G+ GKG Y Y+K G
Sbjct: 529 VGWKSRKGQGLTGPTLPPGTPARKRGNRRY-CPIPDVLCELGRFGQKTGKGWYQYDKPLG 587
Query: 585 SKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRA 644
K DP + + + R +I +P ++++ EI+E L+ ++NE+ R+L EGI
Sbjct: 588 RIHKADPWLSKFLSQYRETHHI----EPRTISQDEILERCLYSLINEAFRILGEGIAASP 643
Query: 645 SDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF--FKPSRFLEERAT 702
+D + G +P ++GG +F+A VG V L+K+ + + +PS +L++ A+
Sbjct: 644 EHIDVVYLHGYGWPRHKGGPMFYASTVGLPTVLEKLQKYYRQNPDIPQLEPSDYLKKLAS 703
Query: 703 KGIP 706
+G P
Sbjct: 704 QGNP 707
>gi|319780809|ref|YP_004140285.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Mesorhizobium
ciceri biovar biserrulae WSM1271]
gi|317166697|gb|ADV10235.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Mesorhizobium
ciceri biovar biserrulae WSM1271]
Length = 688
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 260/703 (36%), Positives = 366/703 (52%), Gaps = 31/703 (4%)
Query: 8 MEVGNDG-VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFD 66
++V DG VA++T+ NPPVNAL+ + L E V AIV+ G F G D
Sbjct: 5 VKVSRDGDVAVVTIDNPPVNALSFHVREPLMQALVELRDDASVAAIVIACAGRTFVAGAD 64
Query: 67 INVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA 126
I F K M + +V +E KP VAA+ G ALGGGLELA+GCH R+A
Sbjct: 65 ITEFGKP--------MQQPELRAIVATLETIAKPTVAAIHGTALGGGLELALGCHFRVAD 116
Query: 127 PKTQLGLPEL---TLGVIPGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS 183
+LGLPE+ L GT RLPRLVG KA++M++ I + E GL+DAV
Sbjct: 117 AGAKLGLPEVKLGLLPGGGGTVRLPRLVGAVKALKMIVSGAPIGATEAHAAGLVDAVFEG 176
Query: 184 EELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQA 243
+ L + +A +IA + P+ R + L A ++ A L K P A
Sbjct: 177 D-LTTHAVNFAGEIARKGGPFTPVRDRNEGLKQADLAAFDVEAADLARKARGLEAPI--A 233
Query: 244 CLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPR 303
C + + + + E +F +LV D SR H+FFA+R +K+P DI R
Sbjct: 234 CAQSVRNAVTLPFDAALAAERALFVKLVASDQSRAQRHLFFAEREAAKLPG-KDI--VKR 290
Query: 304 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQ 363
+ +V VIG G MG GIA A V+L E + E L +G+ TI+ N VTRG L++
Sbjct: 291 RIARVGVIGAGTMGGGIAMAFANGGYSVILLETSHEALQRGLATIDRNYSVSVTRGSLSE 350
Query: 364 DKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI 423
D L KG DY + D D+++EAV E + +K+++F +LE P ILATNTS +
Sbjct: 351 DAKRQRLAQFKGSTDYVDLADCDLIVEAVFEDMAVKKEVFGKLEAVAKPGAILATNTSYL 410
Query: 424 DLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVV 483
D+N + TS ++G HFFSPA+VM LLEIVR E+T+ + + + + I KV VVV
Sbjct: 411 DINEIAGSTSRPQDVLGLHFFSPANVMKLLEIVRAEKTAPDALATSVDLARRIGKVAVVV 470
Query: 484 GNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAAT 543
G C GF NR + L+ G +ID FG P+GPFQ+ DLAG +
Sbjct: 471 GVCHGFVGNRMLAARGSESEALLLEGATPSQIDQVFTDFGWPMGPFQMGDLAGLDIGWRN 530
Query: 544 SKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRR 602
K R ++ + D L + GR G+ G+G Y YE G++ P PDP V +I +
Sbjct: 531 RKA-------RGQKAVIADTLCEQGRFGQKTGRGFYLYEAGARTPVPDPEVEALIRDKAA 583
Query: 603 LSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRG 662
+ I P +++ +EIVE L+P++NE ++LEEGI RASD+D V G FP +G
Sbjct: 584 ENGIA----PRAISAEEIVERTLYPLINEGAKILEEGIAARASDIDVVWVNGYGFPIGKG 639
Query: 663 GIVFWADAVGANYVYTSLKKWSQLYG-NFFKPSRFLEERATKG 704
G +FW G + L+ W Q G + FKP+ L+ A G
Sbjct: 640 GPMFWVGLEGPARIIERLEYWHQRTGKDVFKPAPLLKRMAETG 682
>gi|311106832|ref|YP_003979685.1| enoyl-CoA hydratase [Achromobacter xylosoxidans A8]
gi|310761521|gb|ADP16970.1| enoyl-CoA hydratase/3,2-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA
dehydrogenase [Achromobacter xylosoxidans A8]
Length = 706
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 236/708 (33%), Positives = 372/708 (52%), Gaps = 43/708 (6%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
D + ++T+ +PPVNAL+ + A L +A + V+AI+L G G F G DI F K
Sbjct: 16 DDILVVTIDHPPVNALSAAVRADLAAAIRDAQADPQVRAILLLGAGKNFIAGADIREFGK 75
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
P + E V N IE KP+VAA+ G ALGGGLE+A+ H R+A +LG
Sbjct: 76 -------PPQPPILPE-VCNQIEASAKPVVAALHGAALGGGLEVALAAHYRVALAGARLG 127
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEE---- 185
LPE+ LG++PG TQR PRL+G A+++ML K +T+ + GL+DA+ +
Sbjct: 128 LPEVNLGLLPGAGGTQRAPRLMGAQAALDLMLSGKHLTAGSAREAGLVDALSDEADPLDA 187
Query: 186 -LLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSE---AREVLKLARLQAKKTAPNMPQH 241
L +L AL RR T G+L + A + A + +T +
Sbjct: 188 GLAYTRQLLALGAGPRR---------TRDAGALEDRVAALAQVDAAAERVARTTRGLYSP 238
Query: 242 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 301
++ + I G+ E +F + + GLVH FFA+R T+K+P +
Sbjct: 239 AKIVEAVRAAIEQPFEEGLRTERALFLQCLDSPQRAGLVHAFFAERDTAKMPGQEPA--R 296
Query: 302 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 361
PR + ++ ++GGG MG+GIA + + V + E + L +G + LV +G++
Sbjct: 297 PRRLERIGIVGGGTMGAGIAVSALDAGFPVTMVEQDEAALERGRGRVAQVYELLVKKGRI 356
Query: 362 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 421
D+ + + G Y D D++IEAV E + +KQ +F++L++ P +LATNTS
Sbjct: 357 GADERDARMARYTGSTRYEALDDADLIIEAVFEDMAVKQTVFAQLDRVAKPGAVLATNTS 416
Query: 422 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 481
+D+N++ T ++G HFFSPA++M LLE+V + T+ + + + ++K+PV
Sbjct: 417 YLDVNLIAAATRGPADVLGLHFFSPANIMKLLEVVVGDHTAPDTVATGFELARRLRKIPV 476
Query: 482 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAA 541
G C GF NR + Q+A +++ G + ID+A+R+FG P+GP+Q+ DLAG +
Sbjct: 477 RAGVCDGFIGNRILAVHRQAADMMMEDGASPYEIDAAVRAFGYPMGPYQMADLAGGDIGW 536
Query: 542 ATSKE----FDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKP-KPDPSVLPI 596
AT K D A R Q P D L + G G+ G+G Y Y G++ + DP VL +
Sbjct: 537 ATRKRRAPTRDPAL--RYVQIP--DRLCERGWFGQKTGRGFYLYPDGARQGEQDPEVLAL 592
Query: 597 IEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMS 656
I+ R + + P + T+++I L ++NE+ VL +GI R SD+D + G
Sbjct: 593 IDAERARAGVTPH----AYTQEDIQRRYLAAMINEAANVLHQGIAQRPSDIDVVFLSGYG 648
Query: 657 FPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
FP YRGG + +AD+VG N V ++ ++Q F+KPS L + A G
Sbjct: 649 FPRYRGGPMHYADSVGLNRVLADIRGYAQEDPAFWKPSPLLVQLAESG 696
>gi|148259275|ref|YP_001233402.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Acidiphilium cryptum
JF-5]
gi|146400956|gb|ABQ29483.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Acidiphilium cryptum JF-5]
Length = 698
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 258/713 (36%), Positives = 378/713 (53%), Gaps = 38/713 (5%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR 60
M+ +V +E+ N GVA+I++ NPPVNAL + AGL ++ A + V+AIVL G
Sbjct: 1 MSEQKVGLEIAN-GVAVISIDNPPVNALGHAVRAGLVEQLAAAEADASVRAIVLACKGRT 59
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
FS G DI F K A + V+ ++C+KP++AA+ G LGGGLELA+GC
Sbjct: 60 FSAGADITEFGKPPRA--------PGLHEVIERFDNCRKPVIAALFGTTLGGGLELALGC 111
Query: 121 HARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 177
H R+A ++GLPE+ LG++PG TQRLPRL+G KA+ ++ K I ++ GLI
Sbjct: 112 HYRVAVESARMGLPEVKLGLLPGAGGTQRLPRLIGPEKAVAAIVSGKMIGAKAALADGLI 171
Query: 178 DAVVTSEELLKVSRLWALDIAARRKP--WIRSLHRTDKLGSLSEAREVLKLARLQAKKTA 235
DA+V+ A+D A P +R R+DK+ + + A +A K
Sbjct: 172 DAIVSD------PVQGAIDFAHTVDPAKLVRVRDRSDKIAAAKADPSAFEAAAAEATKRL 225
Query: 236 PNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV 295
+ AC++ + G E + F LV+ D SR HVFFA+R K+P
Sbjct: 226 KGVEAPAACVEAVRNSFTLPFDEGARAEQQAFMRLVVGDQSRAQRHVFFAEREAQKIPG- 284
Query: 296 TDIGLKPRGVR--KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVR 353
IG + +G + + VIGGG MG GIA I V + E + L +G+ +
Sbjct: 285 --IGPEVKGAKIGRAVVIGGGTMGGGIAMNFANAGIPVTIVETDEAALARGLDRVRGTYD 342
Query: 354 GLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPH 413
V RG L + + G D+ + D+VIEAV E + LK+++F+ L+ P
Sbjct: 343 VSVQRGALPAGTTEKRMALFSGSTDWGVIAEADIVIEAVFEELGLKKEVFARLDGIARPG 402
Query: 414 CILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVG 473
+LATNTST+D++ + T ++G HFFSPA+VM LLEIVR + +SAQ I + VG
Sbjct: 403 ALLATNTSTLDVDAIAAATKRPGDVLGMHFFSPANVMKLLEIVRGKESSAQSIATAIAVG 462
Query: 474 KIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLD 533
K + KVPVVVGNC GF NR + L+ G ++D+ +++FG P+GPF + D
Sbjct: 463 KTLGKVPVVVGNCDGFVGNRMLARRTIECERLMLEGALPQQVDAVVKAFGFPMGPFAMGD 522
Query: 534 LAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPS 592
LAG V K R +P+ D L + GR G+ G+G Y YE GS+ P PDP
Sbjct: 523 LAGLDVGWRIRKH-------RGATAPVSDALCEMGRFGQKTGRGYYVYENGSRVPTPDPE 575
Query: 593 VLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASV 652
V +I E G +++++EI+E + +P++NE+ R+LEEGI +R SD+D V
Sbjct: 576 VEALISE----KAAALGVTRRAISDQEILERMTYPMINEAARILEEGIAIRPSDVDVVWV 631
Query: 653 LGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN-FFKPSRFLEERATKG 704
G +P +RGG F AD VG + L+ ++ G+ P L A G
Sbjct: 632 YGYGWPVWRGGPCFHADLVGLKEIAARLEHYATAVGDETLAPCALLRRLADAG 684
>gi|83950253|ref|ZP_00958986.1| 3-hydroxyacyl-CoA dehydrogenase [Roseovarius nubinhibens ISM]
gi|83838152|gb|EAP77448.1| 3-hydroxyacyl-CoA dehydrogenase [Roseovarius nubinhibens ISM]
Length = 653
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 238/661 (36%), Positives = 341/661 (51%), Gaps = 26/661 (3%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
D +AI T+ NPPVNA+ + GL E + ++A +L G F G DI F +
Sbjct: 9 DDIAIATVDNPPVNAVNHAVREGLLAALAETEANPAIRATILLCAGRSFIAGADIREFGQ 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+PDV ++ +E KP +AA+ G ALGGGLE+A+GCH RIAAP +LG
Sbjct: 69 ---PPKPPHLPDV-----IDRMEGATKPWLAAIHGTALGGGLEIALGCHYRIAAPSARLG 120
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 189
LPE+TLG+IPG T RLPRL+ +A+EM+ K +T+ + +GLIDA+ + L+
Sbjct: 121 LPEVTLGLIPGAGGTVRLPRLIAAEEALEMISGGKPVTAPKALDIGLIDALAEGD--LQE 178
Query: 190 SRLWALDIAARR--KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDV 247
+ ALD R P L A + RL A+ P A L+
Sbjct: 179 A---ALDFLRARLDAPLPTPLRHRQPHAPRDAADWDKRRQRLHARARGQAAPL--AALEA 233
Query: 248 IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRK 307
IE + + +E F L S L HVFFA+RA ++P + D+ P + +
Sbjct: 234 IETALKEPADLALARERDSFLRLKSHPESAALRHVFFAERAAGQMPRLKDV--TPGPLTQ 291
Query: 308 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 367
+ VIGGG MG+GIATA +L ++ V L E ++ G + ++ G R + D+
Sbjct: 292 IGVIGGGTMGAGIATACLLADLPVTLIERDAAACEAGRARVTDSLDGARARRLIDADRHA 351
Query: 368 NALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 427
L L DY+ D+VIEAV E + LK +F+ L+ P CILA+NTS +D+N
Sbjct: 352 TLLSQLATDTDYAALTGADLVIEAVFEDMDLKHAVFAALDAHTRPDCILASNTSYLDIND 411
Query: 428 VGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 487
+ T+ DR+IG HFFSPAHVM LLE++ T+R S + + +GK ++K+ V G C
Sbjct: 412 IARATAQPDRVIGLHFFSPAHVMKLLELIVTDRASDRALATGFALGKRLRKLTVPAGVCD 471
Query: 488 GFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEF 547
GF NR Y + ++ G +ID A+R FG P+G F++ DLAG ++ A K
Sbjct: 472 GFIGNRILSSYRRDTDAILQDGATPSQIDQAMRDFGFPMGIFEMQDLAGLDISWAMRKRR 531
Query: 548 DKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIM 607
+ D L ++GR G+ G+G Y YE G P PDP V EE R S
Sbjct: 532 AATRDPSERYVDIADTLCEAGRFGRKTGRGWYLYEDGKTPIPDPEV----EEIARQSAAA 587
Query: 608 PGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFW 667
G S ++ EI+ IL + E +L E I RASD+D + G FP +RGG ++
Sbjct: 588 AGITRRSFSDDEIISRILATMQREGEEILNENIAERASDIDVVMINGYGFPRWRGGPMYM 647
Query: 668 A 668
A
Sbjct: 648 A 648
>gi|226943850|ref|YP_002798923.1| 3-hydroxyacyl-CoA dehydrogenase [Azotobacter vinelandii DJ]
gi|226718777|gb|ACO77948.1| 3-hydroxyacyl-CoA dehydrogenase [Azotobacter vinelandii DJ]
Length = 697
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 247/694 (35%), Positives = 380/694 (54%), Gaps = 24/694 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+DGVA+++L PP+N L+ + L + A + V+AIVL GN FSGG DIN F
Sbjct: 3 HDGVAVLSLDRPPINNLSFELRTHLLQALDAANADPAVEAIVLHGNDKVFSGGVDINEF- 61
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
G+ + P S+ ++ +E+ +KP+VAA+ L LGGGLELA+GCH R+ + ++
Sbjct: 62 ---GSDLATRSP--SLPELIRAVENSRKPVVAALGDLCLGGGLELALGCHYRVFSASARI 116
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
GLPE+TLG++PG TQ LPR +GL A+ ++L + + + L+D + T E+L
Sbjct: 117 GLPEVTLGLLPGAGGTQLLPRAIGLDAALNLILSGRQQAAADFRDTALVDELAT-EDLRA 175
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKK-TAPNMPQHQACLDV 247
+ +A ++A PW R R ++ E RL+ +K P +
Sbjct: 176 AAVDFARRLSADTVPWPRLRDRPLRVEVEDELYIHFVRDRLKGQKGQGPAPLAALEAVAA 235
Query: 248 IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRK 307
V G+ +E ++F L SR L H F A+RA K+P + D V +
Sbjct: 236 AGRLPVD---EGLEEEGRLFAGLHAGPQSRALCHAFLAERAAGKIPGIDD-STPTIPVER 291
Query: 308 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 367
V V+G G MG+GIA + V L E + L +G+ + + GL+ + +L Q + +
Sbjct: 292 VGVVGAGTMGTGIAIVFLNAGFEVALLESGEQALERGLAVVREHFAGLLAKKRLDQAQCD 351
Query: 368 NALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 427
L L G LDY+ DV + +EAV E + +K+++ L++A P ILA+NTST+DLN+
Sbjct: 352 ALLGKLSGSLDYAALGDVQLAVEAVFEDLEVKRQVLRRLDEALPDGAILASNTSTLDLNL 411
Query: 428 VGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 487
+ E TS + ++G HFFSPA VM LLE+VR RT+ V+ M +GK ++KV V G C
Sbjct: 412 LAEATSRPESVVGLHFFSPAQVMRLLEVVRGRRTADSVMATAMRLGKRLQKVSVASGVCD 471
Query: 488 GFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEF 547
GF NR Y + A LL+ G ++ID A+ ++G+ +GPF++ D+AG + A K
Sbjct: 472 GFIGNRMLNEYLRVAGLLLDAGALPWQIDRALETWGMAMGPFRMCDMAGNDIGWAIRKRQ 531
Query: 548 DKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNI 606
A P F S DLL + GR G+ GKG Y YE G + PDP V +I+ R + +
Sbjct: 532 RAADPGLRF-SATADLLCEQGRFGQKTGKGWYRYEAGRRGGTPDPEVERLIDAYRTRAGL 590
Query: 607 MPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVF 666
+ P ++ ++EIVE ++ +VNE R+LEEGI +RASD+D + G FP RGG +
Sbjct: 591 L----PRTIGDREIVERCIYALVNEGARLLEEGIALRASDVDVVYLAGYGFPRLRGGPMH 646
Query: 667 WADAVGANYVYTSLKKWSQLYG---NFFKPSRFL 697
+A+ G V +++++ G F+ P+ L
Sbjct: 647 YAEEQGLANVVRRMREFACEEGGDARFWTPAPLL 680
>gi|85372891|ref|YP_456953.1| fatty oxidation complex subunit alpha [Erythrobacter litoralis
HTCC2594]
gi|84785974|gb|ABC62156.1| fatty oxidation complex, alpha subunit [Erythrobacter litoralis
HTCC2594]
Length = 678
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 237/679 (34%), Positives = 357/679 (52%), Gaps = 38/679 (5%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+D V +I NPPVNAL + GLKD EEA D +KA+V+ +G F G DI F
Sbjct: 10 HDDVLVIISDNPPVNALGQAVRQGLKDGVEEAMGDDAIKAVVIRCDGRTFFAGADITEFG 69
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K + +P+ ++ +E KP+VAA+ G ALGGG E+A+ CH R+A P +L
Sbjct: 70 KPPQGPN---LPET-----LDAMEAGDKPVVAAIHGTALGGGCEVALACHYRVAVPSAKL 121
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
GLPE+ LG+IPG TQRLPR+VG+ A+ M++ I + + +GL+D +V + L
Sbjct: 122 GLPEVKLGLIPGAAGTQRLPRVVGVEAALPMVVNGNPIPAAKAEAIGLVDKIVGEDSLEA 181
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKK----TAPNMPQHQAC 244
+ +A + KP RS T + + A+K AP+
Sbjct: 182 DAIAFAREQIG--KPVPRSSEGTAHEDGVKNPDLFDEFRARNARKIRGFDAPDAAVKAVK 239
Query: 245 LDVIEEGIVHGGYS-GVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPR 303
Y+ GV KE ++F L+ S + H FFA+RA +K+ NV D
Sbjct: 240 A------ATERPYAEGVKKERELFTGLMSGTQSAAMRHYFFAERAANKIDNV-DPKTPLI 292
Query: 304 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQ 363
++KV VIG G MG GIA + I V + E+ + L +G I N +G++
Sbjct: 293 DIQKVGVIGAGTMGGGIAMNFLSAGIPVTILEMKQDALDRGTGVIAKNYERTAKKGRMKP 352
Query: 364 DKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI 423
++ A+ +L LDY++ D D+VIEAV E++ +K+++F++L++ ILA+NTS +
Sbjct: 353 EQVEQAMGLLNPTLDYADLADCDLVIEAVYENMDVKKEVFAKLDETVKQGAILASNTSYL 412
Query: 424 DLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVV 483
+++ + + T ++G HFFSPA+VM LLEIVR T V+L M + K I KV VV
Sbjct: 413 NIDEIAQATKRPGYVLGLHFFSPANVMKLLEIVRGAETRDDVLLTSMKLAKKIGKVAVVA 472
Query: 484 GNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAAT 543
G C GF NR P + A L+ G + +D + FG P+GPFQ+ DLAG +
Sbjct: 473 GVCDGFIGNRMLSPRQKQANELIMEGAKYWEVDDVLLEFGFPMGPFQMADLAGIDIGWHR 532
Query: 544 SKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRL 603
D S + + + L + R G+ NGKG Y Y++ + P V II + R
Sbjct: 533 ---------DPSKVTTIREALCAAERFGQKNGKGFYDYDEARQRTPSEEVQAIIADFARK 583
Query: 604 SNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGG 663
G + +++ EI E +L+P+VNE +L+EG+ RASD+D + G +P Y GG
Sbjct: 584 E----GTEQRDISKDEIRERLLYPMVNEGAMILDEGMAQRASDIDVVWINGYGWPLYTGG 639
Query: 664 IVFWADAVGANYVYTSLKK 682
+FWAD VG + + L+K
Sbjct: 640 PMFWADTVGLDTIVAGLEK 658
>gi|334343134|ref|YP_004555738.1| 3-hydroxybutyryl-CoA epimerase [Sphingobium chlorophenolicum L-1]
gi|334103809|gb|AEG51232.1| 3-hydroxybutyryl-CoA epimerase [Sphingobium chlorophenolicum L-1]
Length = 703
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 243/698 (34%), Positives = 368/698 (52%), Gaps = 31/698 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+ I NPPVNAL I + GL EE + VKAIVL G F G DI F K
Sbjct: 16 IGFIISDNPPVNALGIAVRQGLVGALEELDADPAVKAIVLYCAGRTFFAGADITEFGKPR 75
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
+ +++ V+ +E+ KP+VAA+ G ALGGGLE A+GC R+A P ++GLP
Sbjct: 76 QS--------PTLQDVIAALENSTKPVVAAIHGTALGGGLETALGCAFRVAIPSAKVGLP 127
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 191
E+ LG+ G TQRLPRL+G KA+E +L K + +++ +LG++DAV + + +
Sbjct: 128 EINLGLFAGGGGTQRLPRLIGPEKALEHVLSGKPVGAKQALELGIVDAVEDGDPAV-IGA 186
Query: 192 LWALDIAARRKPWIRSLHRTDKLG-SLSEAREVLKLAR-LQAKKTAPNMPQHQACLDVIE 249
+A + + P + R +KL + ++ + LA+ L A+ PQ A +D I
Sbjct: 187 AFARRVIDEKIPAVPVRDRDEKLAETRADPSDFDALAKKLTARSKGQLAPQ--ANIDSIR 244
Query: 250 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 309
G + +A +EL+ SR L H+FFA+R +++P + + K R V+K A
Sbjct: 245 RSFTMGLDEAMAVDAVANRELMAGSQSRALRHLFFAEREAARIPGLPETA-KARPVKKAA 303
Query: 310 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 369
+IG G MG GIA I V + + + L +G+ + N V RG + Q + +
Sbjct: 304 IIGAGTMGGGIAMCFAGAGIAVTVIDTTQDALDRGLDRVRGNYATSVKRGSIAQAQMDER 363
Query: 370 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 429
L ++ G D + D D+VIEAV E + +K++IFS+LEK P ILA+NTS +D++ +
Sbjct: 364 LALITGATDRAAAADADIVIEAVFEDMDVKKEIFSDLEKRVKPGTILASNTSALDVDEIA 423
Query: 430 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 489
+ +G HFFSPA+VM LLE+V + +S IL M VGK I KV V GNC GF
Sbjct: 424 SVLERPEDFVGMHFFSPANVMKLLEVVVAKHSSPDAILTAMAVGKAIGKVSVWSGNCDGF 483
Query: 490 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDK 549
NR S A L+ G ++D+A+ + G P+GP D++G + + K
Sbjct: 484 IGNRMVAKRSAQAERLLQQGAFPQQVDAALTNLGFPMGPLTTNDMSGLDIGYSIRKRRGT 543
Query: 550 AFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIMP 608
F P+ D +++SGR G+ G G Y YE G + P P+P +I I
Sbjct: 544 PF-------PIADAIVESGRLGQKTGAGYYRYEPGDRTPHPNPETEALIIATSEKMGI-- 594
Query: 609 GGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWA 668
+ E+E+V+ +LFP++NE R+LEEGI +RASD+D + G +P + GG +F A
Sbjct: 595 --ARRDIAEEEMVQRLLFPLINEGARILEEGIALRASDVDLVWINGYGWPRHLGGPMFHA 652
Query: 669 DAVGANYVYTSLKKWSQLYGN--FFKPSRFLEERATKG 704
D G + L++ + + +P+ L E A KG
Sbjct: 653 DETGLAKIVAKLREMAAETPDDPSLQPAALLTELAEKG 690
>gi|33603778|ref|NP_891338.1| bifunctional enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase
[Bordetella bronchiseptica RB50]
gi|33577903|emb|CAE35168.1| probable enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase,
bifunctional enzyme [Bordetella bronchiseptica RB50]
Length = 705
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 245/700 (35%), Positives = 369/700 (52%), Gaps = 37/700 (5%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA++++ NPPVNAL+ + AGL EA + V+A+VL G F G DI F +
Sbjct: 21 VAVLSVDNPPVNALSDTVRAGLCSALREAEADPAVRAVVLACEGNTFVAGADIREFARAK 80
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
GA + +P V IE C+KP+VAA+ G ALGGGLELA+ CH R+A +LGLP
Sbjct: 81 GAAEAIDVPAV--------IESCRKPVVAALHGQALGGGLELALACHGRVALAGCRLGLP 132
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 191
E+TLG+IPG TQRLPRL+GL A E++L +I +E + GL+DAV R
Sbjct: 133 EITLGLIPGGGGTQRLPRLIGLEAAAELILSGATIDAETARESGLLDAVWPDR-----LR 187
Query: 192 LWALDIAARRKPWIRSLHRTDKLG----SLSEAREVLKLARLQAKKTAPNMPQHQACLDV 247
A++ AA + R L S +++ K+A +++ A PQ A
Sbjct: 188 ERAIEFAASLADSPAGVRRASTLAHPPMSPQTGQDLRKIA--ESRPAALRAPQAGAAAVE 245
Query: 248 IEEGIVHGGYS-GVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 306
++ G E ++F L + SR L +FFA+R+ +V + D P
Sbjct: 246 ALSAAAQPDFARGRALERELFARLRDGEESRALRALFFAERSARRV-GLDDATSAPPMAH 304
Query: 307 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 366
AV+G G MG GIA A + V L +V L + ++ I A+ R L RG++T+ A
Sbjct: 305 DAAVVGAGTMGRGIAIALADAGLRVRLIDVEQASLDRALEAIRAHYRSLAARGRMTEAAA 364
Query: 367 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 426
+A+ + D + D+V+EA E + +KQ IF +L+ P +LATNTST+D++
Sbjct: 365 RDAVARISPASDMQAAAEADVVVEAAFEDLAIKQAIFRQLDSIVRPGAVLATNTSTLDVD 424
Query: 427 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 486
+ T ++G HFFSPA+VM LLE+VR RT+ + + ++ +G+ + KV V VG C
Sbjct: 425 AIAAATRRPQDVVGTHFFSPANVMRLLEVVRGARTAPRTLGAVLALGRRMGKVCVTVGVC 484
Query: 487 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKE 546
GF NR ++ LL+ G ID A R FG +GP DLAG ++ +
Sbjct: 485 DGFVANRMSAHRARQIELLLQHGALPQDIDQAAREFGFSMGPCAATDLAGLDISWRIRR- 543
Query: 547 FDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVLPIIEECRRLSN 605
+ +SP+ D L + GR G+ G+G ++Y GS+ PDP V +I RR++
Sbjct: 544 ------GKGARSPIADALCELGRFGQKVGRGYFSYAPGSRVAVPDPEVEALI---RRMAE 594
Query: 606 IMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIV 665
+ G + S I + ++ PV+NE RVL++G+ +ASD+D V G +P+ RGG +
Sbjct: 595 QL-GIRRQSFDLATITDRLILPVINEGARVLQDGVARQASDIDLIWVHGFGWPARRGGPM 653
Query: 666 FWADAVGANYVYTSLKKWSQ-LYGNFFKPSRFLEERATKG 704
F A+ VG V L + + L +P+ L + AT+G
Sbjct: 654 FHAERVGLASVCDRLARLADALEDASLQPAPLLRDLATRG 693
>gi|293605889|ref|ZP_06688259.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Achromobacter piechaudii ATCC 43553]
gi|292815676|gb|EFF74787.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Achromobacter piechaudii ATCC 43553]
Length = 707
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 248/701 (35%), Positives = 373/701 (53%), Gaps = 26/701 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+ + +ITL +PPVNAL+ + L E A + DV+A++L G G F G DI F
Sbjct: 15 DQDILVITLDHPPVNALSADVRRDLAAAIEAAQADADVRAVLLVGAGKNFIAGADIREFG 74
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K +PDV N IE KP+VAA+ G ALGGGLE+A+ H R+A +L
Sbjct: 75 K---PPKPPALPDV-----CNQIEASTKPVVAALHGAALGGGLEIALAAHYRLALASAKL 126
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
GLPE+ LG++PG TQR PRL+G + A+++ML K +++E K GL+D + ++ L
Sbjct: 127 GLPEVNLGLLPGAGGTQRTPRLIGAAAALDLMLTGKHLSAEAALKAGLVDTLAEGDDPLA 186
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 248
+ + A+ RS + L + A A + +T + ++ +
Sbjct: 187 AGLAYTRQLLAQGAGPRRSRDASAALADKAAALAEAAAAGERVSQTLRGLYSPAKIVEAV 246
Query: 249 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 308
I G+ E +F + + GLVH FFA+R T+KVP + + KPR + KV
Sbjct: 247 RAAIEQPFDEGLRTERALFLQCLNSPQRAGLVHAFFAERETAKVPELKEA--KPRRLDKV 304
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
V+GGG MG+GIA A + + VV+ E + L +G + LV G+L+ +
Sbjct: 305 GVVGGGTMGAGIAVAMLDAGLPVVMIEQDEPALERGRARVAQVYDRLVKNGRLSAQDRDA 364
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
L L G Y D D+++EAV E + +K +F++L++ P +LATNTS +D+N +
Sbjct: 365 RLARLTGATSYDALDDADLIVEAVFEDMDVKLGVFAQLDRVAKPGAVLATNTSYLDVNRI 424
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
T ++G HFFSPA++M LLEIV E T+A + + + ++K PV G C G
Sbjct: 425 ASATRGPADVLGLHFFSPANIMKLLEIVVGEHTAADTVATGFELARRLRKTPVRAGVCDG 484
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKE-- 546
F NR Y Q+A +++ G + ID+A R FG P+GP+Q++DLAG + AT K
Sbjct: 485 FIGNRILAAYRQAADMMMEDGASPYDIDAAAREFGYPMGPYQMVDLAGGDIGWATRKRRA 544
Query: 547 --FDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRL 603
D A R+ Q P D L + G G+ G+G Y Y G++ PDP VL II+E RR
Sbjct: 545 ATRDPAL--RTVQIP--DRLCERGWFGQKTGRGFYLYPDGARVGTPDPEVLAIIDEERRR 600
Query: 604 SNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGG 663
+ I P + T ++I+ L ++NE+ VL EGI +R SD+D + G FP YRGG
Sbjct: 601 AGIT----PRAFTHEDILRRYLAAMINEAANVLHEGIALRPSDVDVVFLSGYGFPRYRGG 656
Query: 664 IVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+ +AD+VG V ++ +++ F+KPS L A G
Sbjct: 657 PMHYADSVGLAQVLADIRAYAKEDPAFWKPSPLLVRLAESG 697
>gi|427816788|ref|ZP_18983852.1| probable enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase,
bifunctional enzyme [Bordetella bronchiseptica 1289]
gi|410567788|emb|CCN25360.1| probable enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase,
bifunctional enzyme [Bordetella bronchiseptica 1289]
Length = 705
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 245/700 (35%), Positives = 369/700 (52%), Gaps = 37/700 (5%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA++++ NPPVNAL+ + AGL EA + V+A+VL G F G DI F +
Sbjct: 21 VAVLSVDNPPVNALSDTVRAGLCSALREAEADPAVRAVVLACEGNTFVAGADIREFARAK 80
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
GA + +P V IE C+KP+VAA+ G ALGGGLELA+ CH R+A +LGLP
Sbjct: 81 GAAEAIDVPAV--------IESCRKPVVAALHGQALGGGLELALACHGRVALAGCRLGLP 132
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 191
E+TLG+IPG TQRLPRL+GL A E++L +I +E + GL+DAV R
Sbjct: 133 EITLGLIPGGGGTQRLPRLIGLEAAAELILSGATIDAETARESGLLDAVWPDR-----LR 187
Query: 192 LWALDIAARRKPWIRSLHRTDKLG----SLSEAREVLKLARLQAKKTAPNMPQHQACLDV 247
A++ AA + R L S +++ K+A +++ A PQ A
Sbjct: 188 ERAIEFAASLADSPAGVRRASTLAHPPMSPQTGQDLRKIA--ESRPAALRAPQAGAAAVE 245
Query: 248 IEEGIVHGGYS-GVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 306
++ G E ++F L + SR L +FFA+R+ +V + D P
Sbjct: 246 ALSAAAQPDFARGRALERELFARLRDGEESRALRALFFAERSARRV-GLDDATSAPPMAH 304
Query: 307 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 366
AV+G G MG GIA A + V L +V L + ++ I A+ R L RG++T+ A
Sbjct: 305 DAAVVGAGTMGRGIAIALADAGLRVRLIDVEQASLDRALEAIRAHYRSLAARGRMTKAAA 364
Query: 367 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 426
+A+ + D + D+V+EA E + +KQ IF +L+ P +LATNTST+D++
Sbjct: 365 RDAVARISPASDMQAAAEADVVVEAAFEDLAIKQAIFRQLDSIVRPGAVLATNTSTLDVD 424
Query: 427 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 486
+ T ++G HFFSPA+VM LLE+VR RT+ + + ++ +G+ + KV V VG C
Sbjct: 425 AIAAATRRPQDVVGTHFFSPANVMRLLEVVRGARTAPRTLGAVLALGRRMGKVCVTVGVC 484
Query: 487 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKE 546
GF NR ++ LL+ G ID A R FG +GP DLAG ++ +
Sbjct: 485 DGFVANRMSAHRARQIELLLQHGALPQDIDQAAREFGFSMGPCAATDLAGLDISWRIRR- 543
Query: 547 FDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSN 605
+ +SP+ D L + GR G+ G+G ++Y GS+ PDP V +I RR++
Sbjct: 544 ------GKGARSPIADALCELGRFGQKVGRGYFSYAPGSRVAVPDPEVEALI---RRMAE 594
Query: 606 IMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIV 665
+ G + S I + ++ PV+NE RVL++G+ +ASD+D V G +P+ RGG +
Sbjct: 595 QL-GIRRQSFDLATITDRLILPVINEGARVLQDGVARQASDIDLIWVHGFGWPARRGGPM 653
Query: 666 FWADAVGANYVYTSLKKWSQ-LYGNFFKPSRFLEERATKG 704
F A+ VG V L + + L +P+ L + AT+G
Sbjct: 654 FHAERVGLASVCDRLARLADALEDASLQPAPLLRDLATRG 693
>gi|390167396|ref|ZP_10219386.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingobium indicum B90A]
gi|389589946|gb|EIM67952.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingobium indicum B90A]
Length = 705
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 252/702 (35%), Positives = 378/702 (53%), Gaps = 38/702 (5%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+DGVA+I L NPPVN L+ + + D E +++ A VL G FSGG DI F
Sbjct: 8 HDGVAVIALDNPPVNGLSHALRCSIVDAVAEVNLNENIVAAVLIGAALPFSGGADITEF- 66
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
G PD+ V+ +E KP+VAA+ G+ALGGGLELA+GCHAR+A ++
Sbjct: 67 ---GTPKSWEQPDLVA--VIEAVEASAKPVVAAIAGVALGGGLELALGCHARVALRNARV 121
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT-SEELL 187
GLPE+ LG++PG TQRLPRLVG+ A++++ + + + G+ A+V E+LL
Sbjct: 122 GLPEVKLGLLPGAGGTQRLPRLVGVETALDLITSGRLLPAGAAELKGMFAALVEPDEDLL 181
Query: 188 KVSRLWALDIAARRKPWIRSLHRTDKLGSLS-----EAR-EVLKLARLQAKKTAPNMPQH 241
+V+ A RS+ R+ L S+S + R E+ AR + ++ P
Sbjct: 182 EVASSIA-----------RSVARSGDLPSISSLPPAQPRPEIFDAARARLSRSGERYPAL 230
Query: 242 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGL 300
+ +E V +G+ E FK L+ D S+ L H F A+R S V + D+G+
Sbjct: 231 PEIIAAVEAATVLDFAAGMEVEKSAFKRLIETDVSKALRHGFLAERRASHVRAIGADVGV 290
Query: 301 KPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGK 360
R + AVIG GLMG+GIA I V L E + + ++ K+++ + V +G+
Sbjct: 291 --RRLDTAAVIGAGLMGTGIAQCLAAAGIEVTLLETSEQATVRSEKSVDDVLGRAVAKGR 348
Query: 361 LTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 420
LT +A +++ DY + ++VD+ IEAV ES+ K+ +F EL++ P ILA+NT
Sbjct: 349 LTAKQAEAQKALIRWTTDYGDLRNVDIAIEAVFESLEAKRAVFEELDRNLRPGAILASNT 408
Query: 421 STIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVP 480
ST+DLN + T ++G HFFSPA+VM LLE+VR +RT+ V+ M G+ I KV
Sbjct: 409 STLDLNAIAAFTQRPADVVGTHFFSPANVMRLLEVVRGDRTAPDVVKTAMQFGRRIGKVS 468
Query: 481 VVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVA 540
V+ G C GF NR Y + A LV G F +D A+ FG +GPF++ DLAG +
Sbjct: 469 VLSGVCDGFIGNRMVEEYFRQAMFLVEEGALPFEVDEALEEFGFSMGPFKVADLAGLDIG 528
Query: 541 AATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEEC 600
+ K + PD + SP++D L + GR G+ G+Y Y G DP V I
Sbjct: 529 WSIRKRRAQERPDMPY-SPVLDGLCEQGRFGQKTKAGVYLYADGRTAVRDPEVERSIAAF 587
Query: 601 RRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSY 660
+ NI +++ EIV+ + +VNE ++LEEGI RASD+D + G FP +
Sbjct: 588 SQSQNIARR----EISKSEIVDRCVLALVNEGAKILEEGIAQRASDIDVVYLAGYGFPDF 643
Query: 661 RGGIVFWADAVGANYVYTSLKKWSQLYGN---FFKPSRFLEE 699
RGG +F AD+VG + V + + +L F++P+ L+
Sbjct: 644 RGGPMFHADSVGLDKVVERMTVFERLQTRDPAFWRPAPLLQH 685
>gi|33598705|ref|NP_886348.1| bifunctional enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase
[Bordetella parapertussis 12822]
gi|33574835|emb|CAE39496.1| probable enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase,
bifunctional enzyme [Bordetella parapertussis]
Length = 705
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 245/700 (35%), Positives = 369/700 (52%), Gaps = 37/700 (5%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA++++ NPPVNAL+ + AGL EA + V+A+VL G F G DI F +
Sbjct: 21 VAVLSVDNPPVNALSDTVRAGLCSALREAEADPAVRAVVLACEGNTFVAGADIREFARAK 80
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
GA + +P V IE C+KP+VAA+ G ALGGGLELA+ CH R+A +LGLP
Sbjct: 81 GAAEAIDVPAV--------IESCRKPVVAALHGQALGGGLELALACHGRVALAGCRLGLP 132
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 191
E+TLG+IPG TQRLPRL+GL A E++L +I +E + GL+DAV R
Sbjct: 133 EITLGLIPGGGGTQRLPRLIGLEAAAELILSGATIDAETARESGLLDAVWPDR-----LR 187
Query: 192 LWALDIAARRKPWIRSLHRTDKLG----SLSEAREVLKLARLQAKKTAPNMPQHQA-CLD 246
A++ AA + R L S +++ K+A +++ A PQ A ++
Sbjct: 188 ERAIEFAASLADSSAGVRRASTLAHPPMSPQTGQDLRKIA--ESRPAALRAPQAGAPAVE 245
Query: 247 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 306
+ G E ++F L + SR L +FFA+R+ +V + D P
Sbjct: 246 ALSAAAQPDFARGRALERELFARLRDGEESRALRALFFAERSARRV-GLDDATSAPPMAH 304
Query: 307 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 366
AV+G G MG GIA A + V L +V L + ++ I A+ R L RG++T+ A
Sbjct: 305 DAAVVGAGTMGRGIAIALADAGLRVRLIDVEQASLDRALEAIRAHYRSLAARGRMTEAAA 364
Query: 367 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 426
+A+ + D + D+V+EA E + +KQ IF +L+ P +LATNTST+D++
Sbjct: 365 RDAVARISPASDMQAAAEADVVVEAAFEDLAIKQAIFRQLDSIVRPGAVLATNTSTLDVD 424
Query: 427 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 486
+ T ++G HFFS A+VM LLE+VR RT+ + + ++ +G+ + KV V VG C
Sbjct: 425 AIAAATRRPQDVVGTHFFSLANVMRLLEVVRGARTAPRTLGAVLALGRRMGKVCVTVGVC 484
Query: 487 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKE 546
GF NR ++ LL+ G ID A R FG +GP DLAG ++ +
Sbjct: 485 DGFVANRMSAHRARQIELLLQHGALPQDIDQAAREFGFSMGPCAATDLAGLDISWRIRR- 543
Query: 547 FDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSN 605
+ +SP+ D L + GR G+ G+G ++Y GS+ PDP V +I RR++
Sbjct: 544 ------GKGARSPIADALCELGRFGQKVGRGYFSYAPGSRVAVPDPEVEALI---RRMAE 594
Query: 606 IMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIV 665
+ G + S I + ++ PV+NE RVL++G+ RASD+D V G +P+ RGG +
Sbjct: 595 QL-GIRRQSFDLATITDRLILPVINEGARVLQDGVARRASDIDLIWVHGFGWPARRGGPM 653
Query: 666 FWADAVGANYVYTSLKKWSQ-LYGNFFKPSRFLEERATKG 704
F A+ VG V L + + L +P+ L + AT+G
Sbjct: 654 FHAERVGLASVCDRLARLADALEDASLQPAPLLRDLATRG 693
>gi|327267366|ref|XP_003218473.1| PREDICTED: peroxisomal bifunctional enzyme-like [Anolis
carolinensis]
Length = 729
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 247/701 (35%), Positives = 364/701 (51%), Gaps = 45/701 (6%)
Query: 32 IVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVV 91
+ L+ +A S VKA+V+ G G+FS G DI F + G S S+E VV
Sbjct: 32 VTQALERDVNQANSDPTVKAVVICGANGKFSAGADIRNFANI-GQSKFS-----SLESVV 85
Query: 92 NLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQRLP 148
+LIE KP+VAA+E LA GGGLE+A+GCH RIA K ++GLPE+T+G++PG TQRLP
Sbjct: 86 SLIEKSDKPMVAAIEDLAFGGGLEIALGCHYRIANMKARVGLPEVTIGLLPGAGGTQRLP 145
Query: 149 RLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSL 208
RL+G+ AI+++ + + + E KLG++D VV + L P L
Sbjct: 146 RLIGVPAAIDIITTGRHVPATEALKLGILDEVVEENPIEAAINLAQRVTGQPLGPRRLCL 205
Query: 209 HRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFK 268
KL ++ L ARL+ KK A Q C + + + G+ KE ++F
Sbjct: 206 KEVPKLPNM---EAFLDEARLKVKKRANGQLSPQMCFEAVRASVYLPFAEGIQKEKQLFM 262
Query: 269 ELVMLDTSRGLVHVFFAQRATSK--VPNVTDIGL-KPRGVRKVAVIGGGLMGSGIATAHI 325
L+ S+ L + FFAQRA K +PN G P+ V+K AVIG G MG GI + +
Sbjct: 263 YLLSSGQSKALQYAFFAQRAMEKWVLPNGASWGTADPQPVKKAAVIGLGTMGRGIVASLL 322
Query: 326 LNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGV-----LDYS 380
I VV E + + L G +A V L+ R L + N K K + LD+
Sbjct: 323 KAKIPVVALEQDKKQLEVG----KAAVMALLEREALKMHQ--NGQKPKKPIVPHFTLDFG 376
Query: 381 EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIG 440
KDVD+VIEAV E + LK++IF +L C P +L TNTS +D++ + T ++IG
Sbjct: 377 ALKDVDLVIEAVFEEIALKKEIFHKLSVICKPEALLGTNTSYLDIDEIASVTDRPHKVIG 436
Query: 441 AHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQ 500
HFFSPAH+M L+EI+ ++TS I M++ K + K+ VVVGNC GF NR Y
Sbjct: 437 IHFFSPAHIMKLVEIIYGQQTSPSAIATAMSLAKSMGKIGVVVGNCFGFVGNRMLTHYYD 496
Query: 501 SARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSK---EFDKAFP----- 552
A L+ G +D ++ FG +GP ++ DLAG V K + A P
Sbjct: 497 QAYFLIEDGSTPEEVDKVLQEFGFKMGPLRVGDLAGLDVGWRIRKGKGQTGDALPPGTPP 556
Query: 553 ---DRSFQSPLVDLLLKSGRNGKANGKGLYTYEK--GSKPKPDPSVLPIIEECRRLSNIM 607
D SP+ D+L + GR G+ GKG Y Y+K G +PDP + + + RR NI
Sbjct: 557 RHRDGMRYSPIPDMLCEMGRYGEKTGKGWYLYDKPGGKIAQPDPWLHGFLSDFRRTHNIT 616
Query: 608 PGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFW 667
++++ EI+E L+ + NE R+L +GI +D + G ++P + GG +F+
Sbjct: 617 AR----TISQDEILERCLYSLANEGFRILSDGIASCPEAIDTIYINGYAWPRHTGGPMFY 672
Query: 668 ADAVGANYVYTSLKKWSQLYGNF--FKPSRFLEERATKGIP 706
VG V L+++++ + +PS FL++ G P
Sbjct: 673 TSQVGLPKVLAKLQEYAEANPDIPSLQPSPFLQKLVALGSP 713
>gi|294010130|ref|YP_003543590.1| 3,2-trans-enoyl-CoA isomerase [Sphingobium japonicum UT26S]
gi|292673460|dbj|BAI94978.1| 3,2-trans-enoyl-CoA isomerase [Sphingobium japonicum UT26S]
Length = 705
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 252/702 (35%), Positives = 378/702 (53%), Gaps = 38/702 (5%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+DGVA+I L NPPVN L+ + + D E +++ A VL G FSGG DI F
Sbjct: 8 HDGVAVIALDNPPVNGLSHALRCSIVDAVAEVNLNENIVAAVLIGAALPFSGGADITEF- 66
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
G PD+ V+ +E KP+VAA+ G+ALGGGLELA+GCHAR+A ++
Sbjct: 67 ---GTPKSWEQPDLVA--VIEAVEASAKPVVAAIAGVALGGGLELALGCHARVALRNARV 121
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT-SEELL 187
GLPE+ LG++PG TQRLPRLVG+ A++++ + + + G+ A+V E+LL
Sbjct: 122 GLPEVKLGLLPGAGGTQRLPRLVGVETALDLITSGRLLPAGAAELKGMFAALVEPDEDLL 181
Query: 188 KVSRLWALDIAARRKPWIRSLHRTDKLGSLS-----EAR-EVLKLARLQAKKTAPNMPQH 241
+V+ A RS+ R+ +L S+S + R E+ AR + + P
Sbjct: 182 EVASSIA-----------RSVARSGELPSISSLPPAQPRPEIFDAARARLSGSGERYPAL 230
Query: 242 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGL 300
+ +E V +G+ E FK L+ D S+ L H F A+R S V + D+G+
Sbjct: 231 PEIIAAVEAATVLDFAAGMEVEKAAFKRLIETDVSKALRHGFLAERRASHVREIGADVGV 290
Query: 301 KPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGK 360
R + AVIG GLMG+GIA I V L E + + ++ K+++ + V +G+
Sbjct: 291 --RRLDTAAVIGAGLMGTGIAQCLAAAGIEVTLLETSEQATVRSEKSVDDVLGRAVAKGR 348
Query: 361 LTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 420
LT +A +++ DY + ++VD+ IEAV ES+ K+ +F EL++ P ILA+NT
Sbjct: 349 LTAKQAEAQKALIRWTTDYGDLRNVDIAIEAVFESLEAKRAVFEELDRNLRPGAILASNT 408
Query: 421 STIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVP 480
ST+DLN + T ++G HFFSPA+VM LLE+VR +RT+ V+ M G+ I KV
Sbjct: 409 STLDLNAIAAFTQRPADVVGTHFFSPANVMRLLEVVRGDRTAPDVVKTAMQFGRRIGKVS 468
Query: 481 VVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVA 540
V+ G C GF NR Y + A LV G F +D A+ FG +GPF++ DLAG +
Sbjct: 469 VLSGVCDGFIGNRMVEEYFRQAMFLVEEGALPFEVDEALEEFGFSMGPFKVADLAGLDIG 528
Query: 541 AATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEEC 600
+ K + PD + SP++D L + GR G+ G+Y Y G DP V I
Sbjct: 529 WSIRKRRAQERPDMPY-SPVLDGLCEQGRFGQKTKAGVYLYADGRTAVRDPEVERSIAAF 587
Query: 601 RRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSY 660
+ NI +++ EIV+ + +VNE ++LEEGI RASD+D + G FP +
Sbjct: 588 SQSQNIARR----EISKSEIVDRCVLALVNEGAKILEEGIAQRASDIDVVYLAGYGFPDF 643
Query: 661 RGGIVFWADAVGANYVYTSLKKWSQLYGN---FFKPSRFLEE 699
RGG +F AD+VG + V + + +L F++P+ L+
Sbjct: 644 RGGPMFHADSVGLDKVVERMTVFERLQTRDPAFWRPAPLLQH 685
>gi|103488544|ref|YP_618105.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingopyxis alaskensis RB2256]
gi|98978621|gb|ABF54772.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
[Sphingopyxis alaskensis RB2256]
Length = 677
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 240/690 (34%), Positives = 357/690 (51%), Gaps = 53/690 (7%)
Query: 6 VTMEVGNDG-VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGG 64
VTME DG +A+I + NPPVNAL+ + GL D F+ A + D VKAIVL G F G
Sbjct: 9 VTME--KDGEIAVIIVNNPPVNALSWHVRQGLADHFKAALADDSVKAIVLRCAGATFIAG 66
Query: 65 FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
DI+ F G PD + V+N IE KP+VAA+ G ALGGGLE A+ CH RI
Sbjct: 67 ADISEF------GKPPRGPDFNA--VLNSIEVASKPVVAAIHGTALGGGLETALVCHYRI 118
Query: 125 AAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVV 181
A P +LG+PE+ LG++PG TQRLPR+VG+ A M + + + ++GL+D +
Sbjct: 119 AVPSAKLGVPEVKLGLLPGAGGTQRLPRIVGVEAAATMTSTGDPVPAPKAKEMGLVDELA 178
Query: 182 TSEELLKVSRLWALDIAA------RRKPWIRSLHRTDKLGSLSEARE---VLKLARLQAK 232
+ L + +A A R +P + ++L + + R A L
Sbjct: 179 GEDSLAADAIAFARAKIADGPRPTRERPVFGDVAVIERLKAANAKRWRGFEAPYANLACV 238
Query: 233 KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 292
+ A +P +EG+ E + F +L+ S H+FFA+R +K+
Sbjct: 239 EAATRLP--------FDEGLAF--------EREQFMKLMFGSQSAAQRHIFFAERQAAKI 282
Query: 293 PNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANV 352
+ K R V+KV +IG G MG GI + I + E+ + L +G+ + N
Sbjct: 283 DGLPK-DTKLRDVKKVGIIGAGTMGGGIMMNFLQKGIPCTIVEMAQDALDRGLGVVRKNY 341
Query: 353 RGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPP 412
+G+ T ++ + + ++ L + D D++IEAV E++ +K+ IF +L+ P
Sbjct: 342 DASAAKGRFTPEQVDQMMGLITPSLSLDDLADCDLIIEAVYENMDVKKDIFGKLDTIAKP 401
Query: 413 HCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTV 472
ILA+NTS +D++ + T+ ++G HFFSPA+VM LLE+VR E+T+ + M
Sbjct: 402 GAILASNTSYLDIDEIATATNRPGDVLGMHFFSPANVMKLLEVVRGEKTAPDALATAMAT 461
Query: 473 GKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLL 532
GK I KV VV G C GF NR P A L+ G ++D FG+P+GPFQ+
Sbjct: 462 GKKIGKVAVVAGVCDGFIGNRMLKPRQMEAMKLLLEGATPAQVDKVHVDFGMPMGPFQMS 521
Query: 533 DLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPS 592
DLAG + P+R + D L GR G+ G Y Y++ P P
Sbjct: 522 DLAGVDIGWHRD-------PNRI--ENIRDALCAEGRWGQKKQAGFYDYDEKRNPSESPR 572
Query: 593 VLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASV 652
V IIEE R+ + I + +T++EI+E L+P+VNE R+LEEG RASD+D +
Sbjct: 573 VAEIIEEFRKKAGI----EKREITDQEIIERTLYPMVNEGARILEEGKAQRASDIDVVWI 628
Query: 653 LGMSFPSYRGGIVFWADAVGANYVYTSLKK 682
G +P YRGG +FWA G + + +L+K
Sbjct: 629 YGYGWPVYRGGPMFWAGLEGTDKIVAALEK 658
>gi|407714172|ref|YP_006834737.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia phenoliruptrix
BR3459a]
gi|407236356|gb|AFT86555.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia phenoliruptrix
BR3459a]
Length = 734
Score = 370 bits (951), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 237/699 (33%), Positives = 366/699 (52%), Gaps = 29/699 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
V ++T+ + PVNAL+ + GL E A S V+A++L G G F G DI F K
Sbjct: 46 VLLVTIDHAPVNALSADVRRGLLAAIEAADSDRSVEAVLLVGAGRNFIAGADIREFGK-- 103
Query: 75 GAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
P V L V N IE C KP+VAA+ G ALGGGLE+A+ H RIA +LG
Sbjct: 104 --------PPVPPSLPDVCNRIEACTKPVVAAIHGAALGGGLEVALAAHYRIAVEGAKLG 155
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 189
LPE+ LG++PG TQR PRL+G A+++ML + +++E LGL+D + S ++L
Sbjct: 156 LPEVQLGLLPGAGGTQRTPRLIGAKAALDLMLSGRHASAKEALALGLVDRLGASGDILAE 215
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSE---AREVLKLARLQAKKTAPNMPQHQACLD 246
+A + A + RT +LS+ + L AR + +K + + +D
Sbjct: 216 GLAYAHALLAAHA----TARRTRDAAALSDRAASLAALAAARTETEKKSRGLFSPLKIVD 271
Query: 247 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 306
+E + G+ E ++F + + GLVH FFA+R K P D KPR +
Sbjct: 272 AVEAAVTQPFEEGLRVERQLFLQCLDSPQRAGLVHAFFAEREVLKAPETRDA--KPRALE 329
Query: 307 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 366
+ V+GGG MG+GIA A + + V + E + L +G IE GL+ +G+++ K
Sbjct: 330 AIGVVGGGTMGAGIAVAVLDAGLPVTMIERDEASLARGRAHIEKVYDGLIAKGRMSAAKK 389
Query: 367 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 426
+ G Y + D+VIEAV E + +K+ +F+EL++ C +LATNTS +D++
Sbjct: 390 AELMARWTGSTSYEALANADLVIEAVFEDLAVKKAVFAELDRVCKAGAVLATNTSYLDID 449
Query: 427 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 486
+ S +IG HFFSPA++M LLE+V SA V+ + K ++K PV G C
Sbjct: 450 AIAASISRPADVIGLHFFSPANIMKLLEVVVPRAVSADVVATAFELAKKLRKTPVRAGVC 509
Query: 487 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKE 546
GF NR Y +A ++ G ++ID+A+R+FG P+GPFQ++DLAG + A K
Sbjct: 510 DGFIGNRILAVYRSAADAMMEDGASPYQIDAAVRAFGFPMGPFQVVDLAGGDIGWAARKR 569
Query: 547 FDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKP-KPDPSVLPIIEECRRLSN 605
+ + D L + G G+ G+G Y Y +GS+ +PDP V II+ R +
Sbjct: 570 RAATRNPAARYVQIADRLCERGWFGQKTGRGFYLYPEGSRSGQPDPEVEAIIDAERARAG 629
Query: 606 IMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIV 665
I P S T+ +I+ + ++NE V+ E I +R D+D + G FP YRGG +
Sbjct: 630 ITPR----SFTDDKIMRRYMAAMINEGANVVHERIALRPLDVDVTFLYGYGFPRYRGGPM 685
Query: 666 FWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+AD VG + ++++++ ++ S L E +G
Sbjct: 686 KYADMVGLPRILADIREFAKEDPLLWQASPLLVELVERG 724
>gi|301614191|ref|XP_002936579.1| PREDICTED: peroxisomal bifunctional enzyme [Xenopus (Silurana)
tropicalis]
Length = 727
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 255/749 (34%), Positives = 387/749 (51%), Gaps = 54/749 (7%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR 60
MAA R VA+I + NPPVNAL+ P+ L + E V+AIVL G G+
Sbjct: 1 MAATRTLSHT----VAVIKINNPPVNALSTPVCQALIKELAEVKKDPSVEAIVLCGANGK 56
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
FS G DI F + VS+E + IE KP+VAA+EG+ALGGGLELA+ C
Sbjct: 57 FSAGADIREFSS-------AARRTVSLEDINAEIESTTKPVVAAIEGVALGGGLELALSC 109
Query: 121 HARIAAPKTQLGLPELTLGVIP---GTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 177
H R+A KT +GLPE+ +G++P GTQRLPRL+G+ A+++++ + + + E ++LG++
Sbjct: 110 HYRVAHIKTVMGLPEVLIGILPAAGGTQRLPRLIGIPAALDIIVRGRHVPATEAFQLGIV 169
Query: 178 DAVVTSEELLKVSRLWALDIAARR---KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKT 234
D VV S + ++ AR+ KP T+ + L A +AK+
Sbjct: 170 DEVVPSSAIAAAVQM------ARKVIGKPMDSRRLSTNAVQYNINVDAFLDTALEKAKRQ 223
Query: 235 APNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK--V 292
AC++ + G+ KE ++F L + + FF++R K +
Sbjct: 224 FRGAQAPLACIEAVRASAQLPYQRGIEKERQLFASLWATGQPQAQQYAFFSERNVGKWTL 283
Query: 293 PNVTDI-GLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTI--- 348
P+ ++P +R AVIG G MG GI T+ +NI V+ E +++ L G K +
Sbjct: 284 PSGERWDNVRPCQIRTAAVIGLGTMGRGIVTSLSKSNIPVIALEQDTKQLDSGKKAVNSL 343
Query: 349 -EANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELE 407
E L +G + N L + L++ + K+VD+VIEAV E++ LK+ IF +L
Sbjct: 344 LEREAEKLKKQGNSFAE--GNGLGSVHFTLNFEDLKNVDLVIEAVYENMNLKKDIFRKLS 401
Query: 408 KACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVIL 467
P L TNTS ++++ + T+ +IG HFFSPA++M LLE+VR TS I
Sbjct: 402 SIMKPDAFLCTNTSGLNIDEIASVTNRPQLVIGTHFFSPANIMRLLEVVRGRHTSPTTIA 461
Query: 468 DLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIG 527
M++GK++ KV V+VGNC F NR PY + A L+ G +D A+ FG +G
Sbjct: 462 TAMSLGKMLGKVAVLVGNCPLFVGNRMLGPYLEQANYLLEEGYYPEEVDQALEEFGFAMG 521
Query: 528 PFQLLDLAGYGVAAATSKEFDKA-------FPDRSFQ----SPLVDLLLKSGRNGKANGK 576
PF+++DLAG V + E A P R + PL D+L + GR G+ +GK
Sbjct: 522 PFRMMDLAGLDVGWRSRMEKGLAGSGVPPGTPARQREGNRYCPLADMLCELGRFGQKSGK 581
Query: 577 GLYTYEK--GSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCR 634
G Y YEK G PDP V + + R+ NI K +V ++I++ L+ ++NE R
Sbjct: 582 GWYQYEKPGGRHAHPDPWVRDFLAKYRKTYNI----KQQAVHPEQILQRCLYALINEGFR 637
Query: 635 VLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF--FK 692
VLE+GI D+D G +P +RGG +++A AVG + V L+ + + + K
Sbjct: 638 VLEDGIASGPEDIDVIYNNGYGWPKHRGGPMYYASAVGLHEVLMVLEGYHKANPDVPSMK 697
Query: 693 PSRFLEERATKGIPLSAPVSSSSTSRARL 721
PS L++ A G P P+ T +L
Sbjct: 698 PSFLLKKLAAVGGP---PIKEWRTQLGKL 723
>gi|383873077|ref|NP_001244421.1| peroxisomal bifunctional enzyme [Macaca mulatta]
gi|380790201|gb|AFE66976.1| peroxisomal bifunctional enzyme isoform 1 [Macaca mulatta]
Length = 723
Score = 370 bits (950), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 242/724 (33%), Positives = 381/724 (52%), Gaps = 53/724 (7%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
++ +A+I L NPPVNA++ ++ +K+ ++A +KAIV+ G G+FS G DI+ F
Sbjct: 8 HNALALIRLRNPPVNAISTAVLRDVKEGLQKAVIDHTIKAIVICGAEGKFSAGADIHGFS 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
G +++ VV+ I+ KP+VAA++G+A GGGLELA+GCH RIA + Q+
Sbjct: 68 APRTFG-------LTLGHVVDEIQRNVKPVVAAIQGMAFGGGLELALGCHYRIAHTEAQV 120
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
GLPE+TLG++PG TQ LPRL+G+ A++++ + I + E KLG++D VV S+ + +
Sbjct: 121 GLPEVTLGLLPGARGTQLLPRLIGVPAALDLITSGRHILAGEALKLGILDKVVNSDPVEE 180
Query: 189 VSRLWAL----DIAARR---KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 241
R + +RR KP I+SL D + S EVL L+ +K P
Sbjct: 181 AIRFAQTVSDQPLESRRLCNKP-IQSLPNMDTIFS-----EVL----LKMQKQHPGCLAQ 230
Query: 242 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 301
+AC+ ++ + + G+ KE ++F L +R L + FFA+R +K + K
Sbjct: 231 EACVRAVQAAVQYPYEVGIKKEEELFLYLFQSGQARALQYAFFAERKANKWSTPSGASWK 290
Query: 302 ---PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTR 358
+ V V V+G G MG GI + I V+ + + L K I + + +
Sbjct: 291 TASAQPVSSVGVVGLGTMGRGIVISFARARIPVIAVDSDKNQLATANKIITSVLEKEAS- 349
Query: 359 GKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 418
K+ Q + K E VD+VIEAV E + LK+++F+EL C P L T
Sbjct: 350 -KMQQSGHPWSGPKPKLTSSMKELGGVDLVIEAVFEEMSLKKQVFAELSAVCKPEAFLCT 408
Query: 419 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKK 478
NTS +D++ + T +IG HFFSPAHVM LLE++ + +S I +M + K IKK
Sbjct: 409 NTSALDVDEIASSTDRPHLVIGTHFFSPAHVMKLLEVIPSRYSSPTTIATVMNLSKKIKK 468
Query: 479 VPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYG 538
+ VVVGNC GF NR PY L+ G +D + FG +GPF++ DLAG
Sbjct: 469 IGVVVGNCFGFVGNRMLNPYYNQTYFLLEEGSKPEEVDQVLEEFGFKMGPFRVSDLAGLD 528
Query: 539 VAAATSKEFDKAFP------------DRSFQSPLVDLLLKSGRNGKANGKGLYTYEK--G 584
V + K P +R + P+ D+L + GR G+ GKG Y Y+K G
Sbjct: 529 VGWKSRKGQGLTGPTLPPGTPARKRGNRRY-CPIPDMLCELGRFGQKTGKGWYQYDKPLG 587
Query: 585 SKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRA 644
KPDP + + + R +I +P ++++ EI+E L+ ++NE+ +L EGI
Sbjct: 588 RIHKPDPWLSKFLSQYRETYHI----EPRTISQDEILERCLYSLINEAFHILGEGIATSP 643
Query: 645 SDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF--FKPSRFLEERAT 702
+D + G +P ++GG +F+A VG V L+K+ + + +PS +L++ A+
Sbjct: 644 EHIDVVYLHGYGWPRHKGGPMFYASTVGLPTVLEKLQKYYRQNPDIPQLEPSDYLKKLAS 703
Query: 703 KGIP 706
+G P
Sbjct: 704 QGNP 707
>gi|226193718|ref|ZP_03789321.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia pseudomallei Pakistan 9]
gi|225934296|gb|EEH30280.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia pseudomallei Pakistan 9]
Length = 708
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 241/697 (34%), Positives = 362/697 (51%), Gaps = 19/697 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D V ++T+ +PPVNAL+ + GL D + A + V A+++ G G F G DI F
Sbjct: 17 RDKVLVVTIDHPPVNALSADVRRGLVDALDAADADAAVGAVLIVGAGRNFIAGADIREFG 76
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K+ L+PDV N IE KP+V A+ G ALGGGLE+A+ H R+A P +L
Sbjct: 77 KLPVP---PLLPDV-----CNRIETSGKPVVVALHGAALGGGLEVALAAHYRLAVPGAKL 128
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
GLPE+ LG++PG TQR PRL+G A+E+ML + ++EE LGL+D + S++ L
Sbjct: 129 GLPEVQLGLLPGAGGTQRTPRLIGAKAALELMLSGRHASAEEALALGLVDRLAHSDDTLA 188
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 248
+ ++ A +R L + A L AR + + + +D +
Sbjct: 189 EGLAYVHELLAA-GAGVRRTRDAQGLADRAAAEAALDAARADVARHSRGLFSPARIVDAV 247
Query: 249 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 308
+ G+ E ++F E + GLVH FFAQR +K P T G PR + ++
Sbjct: 248 AAALAQPFDEGLRTERRLFVECLDSPQRAGLVHAFFAQREAAKSPE-TRRG-APRAIERI 305
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
V+GGG MG+GIA A + + V + E + L +G +E GLV +G++T
Sbjct: 306 GVVGGGTMGAGIAVAALDSGFPVTMIERDDASLERGRAHVEKVYAGLVAKGRMTPAAQAA 365
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
L KG Y D+VIEAV E + +K+ +F+EL +AC P +LATNTS +D++ +
Sbjct: 366 RLARFKGGTSYEALAQADVVIEAVFEDMAVKKAVFAELARACKPGAVLATNTSYLDIDEL 425
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
+IG HFFSPA++M LLE+V + SA V+ + + + K+PV G C G
Sbjct: 426 AASVERAPDVIGLHFFSPANIMKLLEVVVPAKVSADVVATAFELARKLGKIPVRAGVCDG 485
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR Y +A ++ G ++ID AIR FG P+GP+Q++DLAG + AT K
Sbjct: 486 FIGNRVLAVYRTAADYMMEDGASPYQIDRAIREFGFPMGPYQVVDLAGGDIGWATRKRRA 545
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIM 607
R + D L + G G+ G+G Y Y G++ PDP V II + R +
Sbjct: 546 PTRDPRLRYVEIGDRLCERGWFGQKTGRGYYLYPDGARVGTPDPEVEAIIAQARAAKGV- 604
Query: 608 PGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFW 667
P + T++EIV L ++NE V+ E I +R D+D + G FP +RGG + +
Sbjct: 605 ---SPRAFTDEEIVRRYLAAMINEGANVVHEKIALRPLDVDAVFLHGYGFPRHRGGPMHY 661
Query: 668 ADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
AD VG V ++ ++ F+KPS L + +G
Sbjct: 662 ADTVGLANVLADIRAFAGEDPVFWKPSPLLVDLVARG 698
>gi|393718288|ref|ZP_10338215.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingomonas echinoides ATCC
14820]
Length = 677
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 243/711 (34%), Positives = 373/711 (52%), Gaps = 46/711 (6%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR 60
M +P +T E+ +D + II+ NPPVNAL + GL+ E + VKA+V+ +G
Sbjct: 1 MTSP-ITTELHDDVLVIISN-NPPVNALGAAVRQGLEAGIAEGLANPQVKAMVIRCDGRT 58
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
F G DI F + M + + VV++IE KP+VAA+ G ALGGG E+ +GC
Sbjct: 59 FFAGADITEFGRP--------MQEPGLPTVVDMIEASDKPVVAAIHGTALGGGCEVTLGC 110
Query: 121 HARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 177
H RIA P ++G PE+ LG++PG TQRLPR+ G+ A+E+ I ++ GLI
Sbjct: 111 HYRIAVPSAKIGTPEVKLGLLPGAGGTQRLPRIAGVKLALELTAKGDPIPAKLALSAGLI 170
Query: 178 DAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKK---- 233
D + + L + +A ++A KP R+ DK+ ++ V + AK+
Sbjct: 171 DRIAGEDTLAADAIAFAREVA-DAKPLPRA---RDKVAQ-ADPEAVAAFKKENAKRFRGF 225
Query: 234 TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 293
AP + AC++ +G G+ E + F +L+ S H+FFA+R +K+
Sbjct: 226 DAP--AANIACVEKATDGSSFD--EGIAFERQEFMKLMFGVQSAAQRHIFFAERQAAKID 281
Query: 294 NVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVR 353
+ D + R +++V VIG G MG GI+ + I V + E+ E L +G I N
Sbjct: 282 GI-DPKIALREIKRVGVIGAGTMGGGISMNFLSAGIPVTIVEMAQEALDRGTGVIRKNYE 340
Query: 354 GLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPH 413
+G+L ++ A+ L LD+S D D++IEAV E++ +K+ IF++L+ P
Sbjct: 341 ASAAKGRLKPEQVEAAMGALTPTLDFSALADCDLIIEAVYENMDVKKDIFTKLDAIAKPG 400
Query: 414 CILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVG 473
ILA+NTS ++++ + T ++G HFFSPA+VM LLE+VR +T V+ +M +
Sbjct: 401 AILASNTSYLNIDEIASVTKRPGDVLGMHFFSPANVMKLLEVVRGAQTEDDVLATVMALS 460
Query: 474 KIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLD 533
K I+KV VV G C GF NR P A L+ G +ID +FG+P+G FQ+ D
Sbjct: 461 KTIRKVAVVAGVCDGFIGNRMLKPRQVEAMKLLLEGATPEQIDKVHVAFGMPMGAFQMSD 520
Query: 534 LAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSV 593
LAG + D + + D L GR G+ GKG Y Y++ P P P V
Sbjct: 521 LAGVDIGWHR---------DPTRIENIRDALAAEGRWGQKTGKGFYDYDEKRNPTPSPRV 571
Query: 594 LPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVL 653
IIE+ R SN+ + ++++EIVE L+ +VNE +LEE + RASD+D +
Sbjct: 572 AEIIEDFRSKSNL----QKREISDEEIVEKTLYTMVNEGALILEEKMAQRASDIDVVWIY 627
Query: 654 GMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
G +P YRGG +FWAD+ G + L+K + F + L+ +A G
Sbjct: 628 GYGWPVYRGGPMFWADSEGLKKIVAGLEK------HGFAVAELLKSKAESG 672
>gi|298714001|emb|CBJ27233.1| enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
[Ectocarpus siliculosus]
Length = 719
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 253/729 (34%), Positives = 367/729 (50%), Gaps = 65/729 (8%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
V +I L PP+N L+ + AG+ + + A + V IV+TG FS G DI H
Sbjct: 11 VGVIRLRKPPLNPLSHDVRAGILEGLKLAQDDEAVSLIVITGGDKAFSAGADIKEMASAH 70
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
V PD+ VV IE C P+VAA+ G+ALGGG E+A+ CH R+A+PK LGLP
Sbjct: 71 A---VRREPDLLT--VVGAIEACTVPVVAAIGGVALGGGCEVALACHLRVASPKASLGLP 125
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVV--TSEELLKV 189
E+ +G++PG TQRLPRLV A+ M+ K I + + + GL+D VV ++ +L++
Sbjct: 126 EVLIGLLPGAGGTQRLPRLVKAEMALSMITTGKMIPAAKALEAGLVDHVVGASAPDLVEA 185
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEARE-----------VLKLARLQAKKTAP-- 236
A+ A RR P + G L R VL + A K P
Sbjct: 186 ----AVSFARRRLPQV--------AGGLDALRTGGRLLKDPVPVVLAVCDAAAAKIGPPV 233
Query: 237 -NMPQHQACLDVIEEGIVHGGY-SGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPN 294
+C++ + G +G+ +E +F L+ SR H+F A+RA ++P
Sbjct: 234 RGAEPRWSCVEALRAAAAGDGLATGMAREGALFSTLIQSQQSRARRHLFLAERAAFRIPR 293
Query: 295 VTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRG 354
P V+ V VIG G MG+GIA A + V L + E L KG+ ++ V
Sbjct: 294 TP---AAPPKVQSVGVIGAGTMGAGIAIAFLFAGFKVTLVDAKQENLDKGLAYLQRGVLS 350
Query: 355 LVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKAC---- 410
RGK+++ A +L L KD DM AV E++ LK++ C
Sbjct: 351 AARRGKISKKTAEATKALLNPALSIDATKDCDMT--AVFENMGLKKRTLRSSSTRCVSHP 408
Query: 411 PPHCILATNTSTIDL--NIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILD 468
P C +NTST+D+ + G T ++G HFFSPAH+MPL+E VR S I
Sbjct: 409 PSSC---SNTSTLDIAPDCKGNHTEPSS-VMGMHFFSPAHMMPLVECVRGADASPLTIAV 464
Query: 469 LMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGP 528
+M K +KKV V+VGNC GF NR Y+ ++ G +D A+++FG+ +GP
Sbjct: 465 VMGATKRLKKVGVLVGNCDGFVGNRMLKWYTAETEFMLEEGASPVEVDRAVKAFGMGMGP 524
Query: 529 FQLLDLAGYGVAAATSKEFD-----KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEK 583
++ D+AG ++ KE K P + S L D L++ GR G+ GKG Y YEK
Sbjct: 525 LEMSDVAGNDISYLIKKERGLLDPAKRNPHERYCS-LGDKLVEVGRYGQKTGKGWYDYEK 583
Query: 584 GS-KPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVV 642
GS KP P P V +IE R+ + G +P ++ +EIVE + ++NE R LEEGI
Sbjct: 584 GSRKPLPSPEVAALIEAHRKET----GSRPRKISPEEIVERCFYALINEGFRCLEEGIAE 639
Query: 643 RASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN--FFKPSRFLEER 700
D+D V G ++P +RGG +FWAD VGA + + K+ +L N ++PS L
Sbjct: 640 HPDDIDVVWVYGYAWPGWRGGPMFWADEVGARTLVRQMAKYQELLPNVSHWQPSPLLLRL 699
Query: 701 ATKGIPLSA 709
A G +SA
Sbjct: 700 AETGQTVSA 708
>gi|449474069|ref|XP_004154065.1| PREDICTED: glyoxysomal fatty acid beta-oxidation multifunctional
protein MFP-a-like, partial [Cucumis sativus]
Length = 337
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 182/307 (59%), Positives = 234/307 (76%), Gaps = 3/307 (0%)
Query: 100 PIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKA 156
P VAA++GLALGGGLE+AM CHAR++ QLGLPEL LG+IPG TQRLPRLVGL KA
Sbjct: 2 PAVAAIDGLALGGGLEVAMACHARLSTKTAQLGLPELQLGLIPGFGGTQRLPRLVGLPKA 61
Query: 157 IEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGS 216
+EMML SK + EE + LGL+DA+V EEL+ +R WALDI+ RRKPWI SLH+T+KL S
Sbjct: 62 LEMMLTSKPVKGEEAFSLGLVDAIVPREELISAARKWALDISERRKPWIISLHKTNKLES 121
Query: 217 LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 276
L++ARE+ K AR Q +K APN+ C+DV+E G+V G +G+ KE + F+ L+ DTS
Sbjct: 122 LADAREIFKFARAQVRKQAPNLKHPLVCIDVVETGVVSGPRAGLQKEIEDFQVLLHADTS 181
Query: 277 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 336
+ L+HVFFAQR T+KVP V+D+GL PR + KVAVIGGGLMGSGIATA IL+N V+LKEV
Sbjct: 182 KSLIHVFFAQRGTTKVPGVSDLGLTPRRINKVAVIGGGLMGSGIATALILSNYPVILKEV 241
Query: 337 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 396
N ++L G+ ++AN++ V +G +T +K + +LKGVLDY FKDVDMVIEAVIE++
Sbjct: 242 NEKFLEAGLGRVKANLQSRVRKGTMTPEKFERTISLLKGVLDYESFKDVDMVIEAVIENI 301
Query: 397 PLKQKIF 403
LKQ+I
Sbjct: 302 SLKQQII 308
>gi|355559806|gb|EHH16534.1| hypothetical protein EGK_11823 [Macaca mulatta]
Length = 723
Score = 369 bits (948), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 243/724 (33%), Positives = 384/724 (53%), Gaps = 53/724 (7%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
++ +A+I L NPPVNA++ ++ +K+ ++A +KAIV+ G G+FS G DI+ F
Sbjct: 8 HNALALIRLRNPPVNAISTAVLRDVKEGLQKAVIDHTIKAIVICGAEGKFSAGADIHGFS 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
G +++ VV+ I+ KP+VAA++G+A GGGLELA+GCH RIA + Q+
Sbjct: 68 APRTFG-------LTLGHVVDEIQRNVKPVVAAIQGMAFGGGLELALGCHYRIAHTEAQV 120
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS---EE 185
GLPE+TLG++PG TQ LPRL+G+ A++++ + I + E KLG++D VV S EE
Sbjct: 121 GLPEVTLGLLPGARGTQLLPRLIGVPAALDLITSGRHILAGEALKLGILDKVVNSDPVEE 180
Query: 186 LLKVSRLWA-LDIAARR---KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 241
++ ++ + + +RR KP I+SL D + S EVL L+ +K P
Sbjct: 181 AIRFAQTVSDQPLESRRLCNKP-IQSLPNMDTIFS-----EVL----LKMQKQHPGCLAQ 230
Query: 242 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 301
+AC+ ++ + + G+ KE ++F L +R L + FFA+R +K + K
Sbjct: 231 EACVRAVQAAVQYPYEVGIKKEEELFLYLFQSGQARALQYAFFAERKANKWSTPSGASWK 290
Query: 302 ---PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTR 358
+ V V V+G G MG GI + I V+ + + L K I + + +
Sbjct: 291 TASAQPVSSVGVVGLGTMGRGIVISFARARIPVIAVDSDKNQLSTANKIITSVLEKEAS- 349
Query: 359 GKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 418
K+ Q + K E VD+VIEAV E + LK+++F+EL C P L T
Sbjct: 350 -KMQQSGHPWSGPKPKLTSSVKELGGVDLVIEAVFEEMSLKKQVFAELSAVCKPEAFLCT 408
Query: 419 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKK 478
NTS +D++ + T +IG HFFSPAHVM LLE++ + +S I +M + K IKK
Sbjct: 409 NTSALDVDEIASSTDRPHLVIGTHFFSPAHVMKLLEVIPSRYSSPTTIATVMNLSKKIKK 468
Query: 479 VPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYG 538
+ VVVGNC GF NR PY L+ G +D + FG +GPF++ DLAG
Sbjct: 469 IGVVVGNCFGFVGNRMLNPYYNQTYFLLEEGSKPEEVDQVLEEFGFKMGPFRVSDLAGLD 528
Query: 539 VAAATSKEFDKAFP------------DRSFQSPLVDLLLKSGRNGKANGKGLYTYEK--G 584
V + K P +R + P+ D+L + GR G+ GKG Y Y+K G
Sbjct: 529 VGWKSRKGQGLTGPTLPPGTPARKRGNRRY-CPIPDMLCELGRFGQKTGKGWYQYDKPLG 587
Query: 585 SKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRA 644
KPDP + + + R +I +P ++++ EI+E L+ ++NE+ +L EGI
Sbjct: 588 RIHKPDPWLSKFLSQYRETYHI----EPRTISQDEILERCLYSLINEAFHILGEGIATSP 643
Query: 645 SDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF--FKPSRFLEERAT 702
+D + G +P ++GG +F+A VG V L+K+ + + +PS +L++ A+
Sbjct: 644 EHIDVVYLHGYGWPRHKGGPMFYASTVGLPTVLEKLQKYYRQNPDIPQLEPSDYLKKLAS 703
Query: 703 KGIP 706
+G P
Sbjct: 704 QGNP 707
>gi|167568599|ref|ZP_02361473.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia oklahomensis C6786]
Length = 708
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 241/697 (34%), Positives = 360/697 (51%), Gaps = 19/697 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D V ++T+ +PPVNAL+ + GL D + A + V A+++ G G F G DI F
Sbjct: 17 RDKVLVVTIDHPPVNALSAAVRRGLVDALDAADADAAVAAVLIVGAGRNFIAGADIREFG 76
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K + V N IE KP+V A+ G LGGGLE+A+ H RIA P +L
Sbjct: 77 KPPVP--------PLLPDVCNRIETSGKPVVVALHGATLGGGLEIALAAHYRIAVPGAKL 128
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
GLPE+ LG++PG TQR PRL+G A+++ML + ++EE LGLID + S++ L
Sbjct: 129 GLPEVRLGLLPGAGGTQRTPRLIGAKAALDLMLSGRHASAEEALTLGLIDRLAHSDDTLA 188
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 248
+A ++ A P +R L + A L AR K + + +D +
Sbjct: 189 EGLAYAQELLAAGAP-VRRTRDAQGLADRAAAEAALDAARADVAKKSRGLFSPAKIVDAV 247
Query: 249 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 308
+ G+ E ++F E + GLVH FFA+R +K P T G PR V ++
Sbjct: 248 AAALAQPFDEGLRAERRLFLECLDSPQRAGLVHAFFAEREAAKSPE-TRRG-APRPVERI 305
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
V+GGG MG+GIA A + + V + E + L +G +E GLV +G++T
Sbjct: 306 GVVGGGTMGAGIAVAALDAGLPVTMIERDDASLERGRAHVEKVYAGLVAKGRMTPAAQAA 365
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
L KG Y D+VIEAV E + +K+ +F+EL + C P +LATNTS +D++ +
Sbjct: 366 RLARFKGGTSYDALAQADVVIEAVFEDMAVKKAVFAELARVCKPGAVLATNTSYLDIDEI 425
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
+IG HFFSPA++M LLE+V + SA V+ + K +KK+PV G C G
Sbjct: 426 AASVERASDVIGLHFFSPANIMKLLEVVVPAQVSADVVATAFELAKKLKKIPVRAGVCDG 485
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR Y +A ++ G ++ID A+R FG P+GP+Q++DLAG + AT K
Sbjct: 486 FIGNRVLAVYRTAADYMMEDGASPYQIDRAVREFGFPMGPYQVVDLAGGDIGWATRKRRA 545
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIM 607
R + D L + G G+ G+G Y Y G++ PDP V II++ R +
Sbjct: 546 PTRDPRLRYVEIPDRLCERGWFGQKTGRGYYLYPDGARVGTPDPEVEAIIDDERAKRGVT 605
Query: 608 PGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFW 667
P + T++EI+ L ++NE V+ E I +R D+D + G FP YRGG + +
Sbjct: 606 ----PRAFTDEEIIRRYLAAMINEGANVVHEKIALRPLDVDAVFLHGYGFPRYRGGPMHY 661
Query: 668 ADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
AD VG V ++ ++ F+KPS L + +G
Sbjct: 662 ADTVGLANVLADIRAFANEDPVFWKPSPLLVDLVARG 698
>gi|53718058|ref|YP_107044.1| trifunctional enoyl-CoA hydratase/3,2-trans-enoyl-CoA
isomerase/3-hydroxyacyl-CoA dehydrogenase [Burkholderia
pseudomallei K96243]
gi|126452416|ref|YP_001064753.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia pseudomallei 1106a]
gi|217419418|ref|ZP_03450924.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia pseudomallei 576]
gi|242317764|ref|ZP_04816780.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase family protein [Burkholderia pseudomallei
1106b]
gi|254295974|ref|ZP_04963431.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia pseudomallei 406e]
gi|386863120|ref|YP_006276069.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Burkholderia pseudomallei 1026b]
gi|403517122|ref|YP_006651255.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia pseudomallei BPC006]
gi|418537788|ref|ZP_13103423.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Burkholderia pseudomallei 1026a]
gi|418542107|ref|ZP_13107563.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Burkholderia pseudomallei 1258a]
gi|418548433|ref|ZP_13113547.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Burkholderia pseudomallei 1258b]
gi|52208472|emb|CAH34407.1| putative trifunctional protein [includes: enoyl-CoA hydratase;
3,2-trans-enoyl-CoA isomerase; 3-hydroxyacyl-CoA
dehydrogenase [Burkholderia pseudomallei K96243]
gi|126226058|gb|ABN89598.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia pseudomallei 1106a]
gi|157806255|gb|EDO83425.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia pseudomallei 406e]
gi|217396722|gb|EEC36738.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia pseudomallei 576]
gi|242141003|gb|EES27405.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase family protein [Burkholderia pseudomallei
1106b]
gi|385349704|gb|EIF56271.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Burkholderia pseudomallei 1026a]
gi|385356414|gb|EIF62523.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Burkholderia pseudomallei 1258a]
gi|385358086|gb|EIF64114.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Burkholderia pseudomallei 1258b]
gi|385660248|gb|AFI67671.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Burkholderia pseudomallei 1026b]
gi|403072766|gb|AFR14346.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia pseudomallei BPC006]
Length = 708
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 241/697 (34%), Positives = 361/697 (51%), Gaps = 19/697 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D V ++T+ +PPVNAL+ + GL D + A + V A+++ G G F G DI F
Sbjct: 17 RDKVLVVTIDHPPVNALSADVRRGLVDALDAADADAAVGAVLIVGAGRNFIAGADIREFG 76
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K+ L+PDV N IE KP+V A+ G ALGGGLE+A+ H R+A P +L
Sbjct: 77 KLPVP---PLLPDV-----CNRIETSGKPVVVALHGAALGGGLEVALAAHYRLAVPGAKL 128
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
GLPE+ LG++PG TQR PRL+G A+E+ML + ++EE LGL+D + S++ L
Sbjct: 129 GLPEVQLGLLPGAGGTQRTPRLIGAKAALELMLSGRHASAEEALALGLVDRLAHSDDTLA 188
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 248
+ ++ A +R L + A L AR + + + +D +
Sbjct: 189 EGLAYVHELLAA-GAGVRRTRDAQGLADRAAAEAALDAARADVARHSRGLFSPARIVDAV 247
Query: 249 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 308
+ G+ E ++F E + GLVH FFAQR +K P T G PR + ++
Sbjct: 248 AAALAQPFDEGLRTERRLFVECLDSPQRAGLVHAFFAQREAAKSPE-TRRG-APRAIERI 305
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
V+GGG MG+GIA A + V + E + L +G +E GLV +G++T
Sbjct: 306 GVVGGGTMGAGIAVAALDAGFPVTMIERDDASLERGRAHVEKVYAGLVAKGRMTPAAQAA 365
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
L KG Y D+VIEAV E + +K+ +F+EL +AC P +LATNTS +D++ +
Sbjct: 366 RLARFKGGTSYEALAQADVVIEAVFEDMAVKKAVFAELARACKPGAVLATNTSYLDIDEL 425
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
+IG HFFSPA++M LLE+V + SA V+ + + + K+PV G C G
Sbjct: 426 AASVERAPDVIGLHFFSPANIMKLLEVVVPAKVSADVVATAFELARKLGKIPVRAGVCDG 485
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR Y +A ++ G ++ID AIR FG P+GP+Q++DLAG + AT K
Sbjct: 486 FIGNRVLAVYRTAADYMMEDGASPYQIDRAIREFGFPMGPYQVVDLAGGDIGWATRKRRA 545
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIM 607
R + D L + G G+ G+G Y Y G++ PDP V II + R +
Sbjct: 546 PTRDPRLRYVEIGDRLCERGWFGQKTGRGYYLYPDGARVGTPDPEVEAIIAQARAAKGV- 604
Query: 608 PGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFW 667
P + T++EIV L ++NE V+ E I +R D+D + G FP +RGG + +
Sbjct: 605 ---SPRAFTDEEIVRRYLAAMINEGANVVHEKIALRPLDVDAVFLHGYGFPRHRGGPMHY 661
Query: 668 ADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
AD VG V ++ ++ F+KPS L + +G
Sbjct: 662 ADTVGLANVLADIRAFAGEDPVFWKPSPLLVDLVARG 698
>gi|440227692|ref|YP_007334783.1| peroxisomal bifunctional enzyme [Rhizobium tropici CIAT 899]
gi|440039203|gb|AGB72237.1| peroxisomal bifunctional enzyme [Rhizobium tropici CIAT 899]
Length = 655
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 235/663 (35%), Positives = 347/663 (52%), Gaps = 33/663 (4%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DG+ ++T+ N PVNA++ + +GL E A V IVLTG G F GG DI F K
Sbjct: 16 DGILVVTIDNAPVNAISADVRSGLMAALEHAEKEGAVAGIVLTGAGNNFIGGADIKEFGK 75
Query: 73 V----HGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPK 128
H +PDV ++ IE KP+VAA+ G ALGGGLE+A+ CH R+AAP
Sbjct: 76 PLVPPH-------LPDV-----ISRIESSPKPVVAAINGAALGGGLEVALACHRRLAAPT 123
Query: 129 TQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEE 185
+LGLPE+ LG++PG TQRLPRL G++ AI+M+ + +++ E KLG++D V E
Sbjct: 124 AKLGLPEVKLGIVPGAGGTQRLPRLTGIAAAIDMIANGRIVSAAEALKLGIVDGVTKGE- 182
Query: 186 LLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACL 245
L A IA + SL RT L EA + + A A + A +
Sbjct: 183 ------LIAEAIADAKMTNAVSLRRTGSLTVPPEATDAIDKAASDASRKARGQRAPSEAV 236
Query: 246 DVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGV 305
++ G+ +E + F L + + L HVFFA+RA KV + + PR +
Sbjct: 237 RLVRLAATVSLSEGLAEERRTFIALRDSEEAAALRHVFFAERAAGKVEGLETVA--PRKI 294
Query: 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDK 365
+ ++G GLMGSGIA + + V+ E ++E KG + I A + V G+L
Sbjct: 295 ETIGIVGTGLMGSGIAVSALNGGYRVIGVEQSAEVAEKGRERITALLDKAVQSGRLDAAG 354
Query: 366 ANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL 425
+ L L D + D++IEAV + + +K ++F L+ ILATNTS +D
Sbjct: 355 REDRLGRLTVTADMQQLVQADLIIEAVFDDLTVKTELFQCLDSIVRAEAILATNTSYLDP 414
Query: 426 NIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 485
++V T +R++G HFFSPA++M LLE+V ++T+ V+ + + K + K+P+V G
Sbjct: 415 DVVAAATQRPERVVGLHFFSPANIMRLLEVVNCKQTAPDVLATAIALAKRLGKLPIVSGV 474
Query: 486 CTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSK 545
GF NR F Y + A +V G ID+A+ ++G P+GPF + D+AG +A A K
Sbjct: 475 TEGFIGNRIFSAYRREAEYMVEDGASPQEIDAALEAYGFPMGPFAVFDMAGLEIAWARRK 534
Query: 546 EFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSN 605
+ D L ++GR G+ G+G Y Y G K DP V +IE R
Sbjct: 535 RQAATRDPAERYVVIADRLCEAGRFGQKTGRGWYAYPDG-KRTDDPEVTAMIEAARAEKA 593
Query: 606 IMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIV 665
I+P S T +EIV +L +V+E +L EGI RASD+D + G FP+ +GG +
Sbjct: 594 IVPK----SFTPEEIVSRLLKAMVDEGEALLSEGIAARASDIDLVMINGYGFPASKGGPM 649
Query: 666 FWA 668
F A
Sbjct: 650 FAA 652
>gi|198426800|ref|XP_002125215.1| PREDICTED: similar to enoyl-Coenzyme A, hydratase/3-hydroxyacyl
Coenzyme A [Ciona intestinalis]
Length = 731
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 243/709 (34%), Positives = 379/709 (53%), Gaps = 43/709 (6%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA+I + NPP+NAL+ + L +EA S + V +IVL G+G F G DI F K
Sbjct: 10 VAVIAVDNPPMNALSHHVRKSLLKYLKEAESDEKVTSIVLCGDGRTFPVGADIKEFHK-- 67
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
VS + ++ +V+ +E KKP +AA+ G ALGGGLE+A+GCH RIA +++GLP
Sbjct: 68 ---SVSKLGPTILD-IVDALEKSKKPTIAAIHGNALGGGLEIALGCHYRIAMTNSKVGLP 123
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVV------TSEE 185
E+ LG++PG TQRLPR++GL A++ + ++ G LGLID VV
Sbjct: 124 EVKLGILPGAGGTQRLPRVIGLDNAMQWIAYGGHHSAGIGASLGLIDRVVPQGGNIREHA 183
Query: 186 LLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACL 245
+L + RR I S+ K+ SL A+ + ++++ AP + CL
Sbjct: 184 ILFAKAAVGKSLGQRRLSNI-SVPDAAKVESLM-AKHLKEVSKKSRGALAPIV-----CL 236
Query: 246 DVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK--VPNVTDI-GLKP 302
VI+ + G+ E + L+ SR ++ FFA+R SK VP VT+ P
Sbjct: 237 QVIKSSALLSYQEGLESERQGMFTLLASSQSRAQIYSFFAERQVSKWSVPGVTNYQNAVP 296
Query: 303 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 362
V+ V V+G G MG GIA + + E+N++ G+K I + + R ++
Sbjct: 297 MKVKAVGVVGLGTMGRGIAICCLRAGKITYVLEMNTKAQTAGVKYIRGYIETMRKRKQIN 356
Query: 363 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 422
+++ L V +Y+ K+VD+VIEAV ES+ +K++IF +LEK C P ILA+NTST
Sbjct: 357 DQQSSMMNNALIPVDNYNGLKNVDLVIEAVFESMKIKKEIFKKLEKVCKPSAILASNTST 416
Query: 423 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 482
++++ + T ++ G HFF+PAH+M LLE +R E++S + I +M +GK ++K V+
Sbjct: 417 LNIDEMASVTKRPQKVAGMHFFAPAHIMMLLENIRGEKSSPETIATIMDLGKQMRKTTVL 476
Query: 483 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVA-- 540
VGNC GF NR F Y+ + L+ G ++D + +G +G FQ+ DL+G +
Sbjct: 477 VGNCHGFVGNRMFAYYTAESSFLLEEGAYPKQVDDVLLDYGFAMGRFQVGDLSGTDIGYK 536
Query: 541 -----AATSKEFDKAFPDRS----FQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDP 591
T K+ P+R SPL D L + GR G KG Y YE P PDP
Sbjct: 537 IRRERGLTHKQQPAGTPERKRGDRRYSPLDDFLYEKGRYGLKARKGWYKYEGSRTPIPDP 596
Query: 592 SVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDAS 651
V +I++ R+ NI P ++ +E ++ ++FP+VNE VL+EGI D+D
Sbjct: 597 EVRKMIDDFRKRHNI----NPRHISPEETLQRMIFPLVNEGFNVLDEGIAANPWDIDMIF 652
Query: 652 VLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN---FFKPSRFL 697
G ++P + GG +++A +G V +++ +L G +KPS+ L
Sbjct: 653 QHGYAWPRHTGGPMYYAYTIGLPQVLKVIEERWKLAGASEPHWKPSKML 701
>gi|452045|gb|AAA53289.1| enyol-CoA: hydratase/3-hydroxyacyl-CoA dehydrogenase [Homo sapiens]
Length = 723
Score = 369 bits (946), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 244/724 (33%), Positives = 385/724 (53%), Gaps = 53/724 (7%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
++ +A+I L NPPVNA++ ++ +K+ ++A +KAIV+ G G+FS G DI F
Sbjct: 8 HNALALIRLRNPPVNAISTTLLRDIKEGLQKAGRDHTIKAIVICGAEGKFSAGADIRGFS 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
G + + VV+ I+ +KP+VAA++G+A GGGLELA+GCH RIA Q+
Sbjct: 68 APRTFGLI-------LGHVVDEIQRNEKPVVAAIQGMAFGGGLELALGCHYRIAHADAQV 120
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS---EE 185
GLPE+TLG++PG TQ LPRL G+ A++++ + I ++E KLG++D VV S EE
Sbjct: 121 GLPEVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVVNSDPVEE 180
Query: 186 LLKVS-RLWALDIAARR---KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 241
++ + R+ + +RR KP I+SL D + SEA +LK+ R P
Sbjct: 181 AIRFAQRVSDQPLESRRLCNKP-IQSLPNMDSI--FSEA--LLKMRRQH-----PGCLAQ 230
Query: 242 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 301
+AC+ ++ + + G+ KE ++F L+ +R L + FFA+R +K + K
Sbjct: 231 EACVRAVQAAVQYPYEVGIKKEEELFLYLLQSGQARALQYAFFAERKANKWSTPSGASWK 290
Query: 302 ---PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTR 358
R V V V+G G MG GI + I V+ + + L K I + + ++
Sbjct: 291 TASARPVSSVGVVGLGTMGRGIVISFARARIPVIGVDSDKNQLATANKMITSVLEKEASK 350
Query: 359 GKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 418
+ + + L + E VD+VIEAV E + LK+++F+EL C P L T
Sbjct: 351 MQQSGHPWSGPKPRLTSSV--KELGGVDLVIEAVFEEMSLKKQVFAELSAVCKPEAFLCT 408
Query: 419 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKK 478
NTS +D++ + T +IG HFFSPAHVM LLE++ ++ +S I +M + K IKK
Sbjct: 409 NTSALDVDEIASSTDRPHLVIGTHFFSPAHVMKLLEVIPSQYSSPTTIATVMNLSKKIKK 468
Query: 479 VPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYG 538
+ VVVGNC GF NR PY A L+ G +D + FG +GPF++ DLAG
Sbjct: 469 IGVVVGNCFGFVGNRMLNPYYNQAYFLLEEGSKPEEVDQVLEEFGFKMGPFRVSDLAGLD 528
Query: 539 VAAATSKEFDKAFP------------DRSFQSPLVDLLLKSGRNGKANGKGLYTYEK--G 584
V + K P +R + P+ D+L + GR G+ GKG Y Y+K G
Sbjct: 529 VGWKSRKGQGLTGPTLLPGTPARKRGNRRY-CPIPDVLCELGRFGQKTGKGWYQYDKPLG 587
Query: 585 SKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRA 644
KPDP + + R+ +I +P ++++ EI+E L+ ++NE+ R+L EGI
Sbjct: 588 RIHKPDPWLSTFLSRYRKPHHI----EPRTISQDEILERCLYSLINEAFRILGEGIAASP 643
Query: 645 SDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF--FKPSRFLEERAT 702
+D + G ++GG +F+A VG V L+K+ + + +PS +L++ A+
Sbjct: 644 EHIDVVYLHGYGCARHKGGPMFYASTVGLPTVLEKLQKYYRQNPDIPQLEPSDYLKKLAS 703
Query: 703 KGIP 706
+G P
Sbjct: 704 QGNP 707
>gi|297623637|ref|YP_003705071.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Truepera
radiovictrix DSM 17093]
gi|297164817|gb|ADI14528.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Truepera
radiovictrix DSM 17093]
Length = 693
Score = 369 bits (946), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 243/677 (35%), Positives = 366/677 (54%), Gaps = 31/677 (4%)
Query: 14 GVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKV 73
GV ++T+ NPPVN L+ + L EA + V+A+VL G G F G D F
Sbjct: 13 GVRVLTVHNPPVNVLSPGVPEALIAGLREANADPSVRAVVLAGGGRTFIAGADARTFDL- 71
Query: 74 HGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGL 133
+PDV ++ +E KP+VAA+ G ALGGGLE+A+ H R+AAP LGL
Sbjct: 72 ----PAEKIPDVPA--IMAALEASHKPVVAALHGTALGGGLEVALASHYRVAAPDALLGL 125
Query: 134 PELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVS 190
PE+ LG++PG TQRL R VG+ +A+E+ML + I + E LGL+D ++ + LL +
Sbjct: 126 PEVKLGLLPGAGGTQRLTRAVGVKRALELMLSGEPIGAREAAALGLVDELIEGD-LLAGA 184
Query: 191 RLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 250
+A +A RR P R R + E + AR + + A + ++++E
Sbjct: 185 VAFAERVADRR-PLPRLSAR-----RAAPDPEAVAAARAELDRRAQGLLSPHFIVELVEA 238
Query: 251 GIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAV 310
G E + F + SR L H+FFA+RA +KV V R VR+V V
Sbjct: 239 ATERPFEEGTRLERERFLQARSSPQSRALRHLFFAERAAAKVAGVGK-ETPTREVRRVGV 297
Query: 311 IGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNAL 370
+G G MG GIA + + + V L E ++ L +G+ T+ AN +G+L+ ++ L
Sbjct: 298 VGAGTMGGGIAMSFLNAGVPVTLLEADAGALERGLATVRANYEASARKGRLSGEEVAARL 357
Query: 371 KMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGE 430
L L+ S + D++IEAV E + +K+++F L+ P ILATNTST+D+N +
Sbjct: 358 GRLTPTLEPSALAEADLIIEAVFEDMEVKKEVFGRLDALAKPGAILATNTSTLDVNEIAA 417
Query: 431 KTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFA 490
TS + ++G HFFSPA+VM L+EIVR ERTSA+V+ + + K + KV VVVG C GF
Sbjct: 418 ATSRPEDVLGLHFFSPANVMKLVEIVRGERTSAEVLATALKLTKRLGKVGVVVGVCDGFV 477
Query: 491 VNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLA----GYGVAAATSKE 546
NR Y + A+ LV G +D A+ +FGLP+GPF++ DLA GY + +K
Sbjct: 478 GNRMIHAYVREAQRLVEEGAAPHEVDGAMHAFGLPMGPFEMGDLAGLDIGYAIRQHRAKL 537
Query: 547 FDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNI 606
PD L+D +++ GR G+ G+Y Y +G K P V +I+ R +
Sbjct: 538 AGAPKPD-----DLLDRIVERGRKGQKTKAGVYDYPEGRKGVPSAEVAALIDALRAERGV 592
Query: 607 MPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVF 666
P ++ ++EI + +L+ +VNE+ R+LEEG+ RA D+D G FP+YRGG +
Sbjct: 593 T----PRTLGQEEITKRLLYTLVNEAARILEEGVAARAGDIDVIYRYGYGFPAYRGGPLH 648
Query: 667 WADAVGANYVYTSLKKW 683
AD G V ++++
Sbjct: 649 HADVQGLGNVLADIRRF 665
>gi|355746836|gb|EHH51450.1| hypothetical protein EGM_10819 [Macaca fascicularis]
Length = 723
Score = 368 bits (945), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 241/725 (33%), Positives = 382/725 (52%), Gaps = 55/725 (7%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
++ +A+I L NPPVNA++ ++ +K+ ++A +KAIV+ G G+FS G DI+ F
Sbjct: 8 HNALALIRLRNPPVNAISTAVLRDVKEGLQKAVIDHTIKAIVICGAEGKFSAGADIHGFS 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
G +++ VV+ I+ KP+VAA++G+A GGGLELA+GCH RIA + Q+
Sbjct: 68 APRTFG-------LTLGHVVDEIQRNVKPVVAAIQGMAFGGGLELALGCHYRIAHTEAQV 120
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
GLPE+TLG++PG TQ LPRL+G+ A++++ + I + E KLG++D VV S+ + +
Sbjct: 121 GLPEVTLGLLPGARGTQLLPRLIGVPAALDLITSGRHILAGEALKLGILDKVVNSDPVEE 180
Query: 189 VSRLWALDIAAR--------RKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQ 240
R +A ++ + KP I+SL D + S EVL L+ +K P
Sbjct: 181 AIR-FAQTVSDQPLESHRLCNKP-IQSLPNMDTIFS-----EVL----LKMQKQHPGCLA 229
Query: 241 HQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGL 300
+AC+ ++ + + G+ KE ++F L +R L + FFA+R +K +
Sbjct: 230 QEACVRAVQAAVQYPYEVGIKKEEELFLYLFQSGQARALQYAFFAERKANKWSTPSGASW 289
Query: 301 K---PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 357
K + V V V+G G MG GI + I V+ + + L K I + + +
Sbjct: 290 KTASAQPVSSVGVVGLGTMGRGIVISFARARIPVIAVDSDKNQLATANKIITSVLEKEAS 349
Query: 358 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 417
K+ Q + K E VD+VIEAV E + LK+++F+EL C P L
Sbjct: 350 --KMQQSGQPWSGPKPKLTSSMKELGGVDLVIEAVFEEMSLKKQVFAELSAVCKPEAFLC 407
Query: 418 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 477
TNTS +D++ + T +IG HFFSPAHVM LLE++ + +S I +M + K IK
Sbjct: 408 TNTSALDVDEIASSTDRPHLVIGTHFFSPAHVMKLLEVIPSRYSSPTTIATVMNLSKKIK 467
Query: 478 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGY 537
K+ VVVGNC GF NR PY L+ G +D + FG +GPF++ DLAG
Sbjct: 468 KIGVVVGNCFGFVGNRMLNPYYNQTYFLLEEGSKPEEVDQVLEEFGFKMGPFRVSDLAGL 527
Query: 538 GVAAATSKEFDKAFP------------DRSFQSPLVDLLLKSGRNGKANGKGLYTYEK-- 583
V + K P +R + P+ D+L + GR G+ GKG Y Y+K
Sbjct: 528 DVGWKSRKGQGLTGPTLPPGTPARKRGNRRY-CPIPDMLCELGRFGQKTGKGWYQYDKPL 586
Query: 584 GSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVR 643
G KPDP + + + R +I +P ++++ EI+E L+ ++NE+ +L EGI
Sbjct: 587 GRIHKPDPWLSKFLSQYRETYHI----EPRTISQDEILERCLYSLINEAFHILGEGIATS 642
Query: 644 ASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF--FKPSRFLEERA 701
+D + G +P ++GG +F+A VG V L+K+ + + +PS +L++ A
Sbjct: 643 PEHIDVVYLHGYGWPRHKGGPMFYASTVGLPTVLEKLQKYYRQNPDIPQLEPSDYLKKLA 702
Query: 702 TKGIP 706
++G P
Sbjct: 703 SQGNP 707
>gi|345317598|ref|XP_001512869.2| PREDICTED: peroxisomal bifunctional enzyme [Ornithorhynchus
anatinus]
Length = 704
Score = 368 bits (945), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 230/700 (32%), Positives = 374/700 (53%), Gaps = 39/700 (5%)
Query: 28 LAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSV 87
+ + + GL+++ ++A VKAIV+ G G+FS G DI F+ G VS++
Sbjct: 7 MCVAVQHGLREELKKAERDSSVKAIVICGADGKFSSGADICGFR----TGKVSVL----- 57
Query: 88 ELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---T 144
L+V+ ++ +KP+VAA+EG+A GG LE+++GCH RIA K +G PE+T+G++PG T
Sbjct: 58 GLLVDELQKMEKPVVAAIEGMAFGGSLEISLGCHYRIAHAKALVGFPEVTIGLLPGARGT 117
Query: 145 QRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPW 204
Q LPRL+G+ A++M+ + + + E KLGL+D VV S+ + + + +A I+ +
Sbjct: 118 QLLPRLIGVPAALDMITSGRHLLAPEALKLGLLDQVVNSDTV-EAAIKFAEQISGQPTES 176
Query: 205 IRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEA 264
R +++ ++ L + A L+ +K P +AC+ ++ + + G+ KE
Sbjct: 177 RRIMNK--QVPELPNMDSIFSEAYLKMRKQFPGCISREACVRAVQAAVQYPYPLGIEKEK 234
Query: 265 KVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK---PRGVRKVAVIGGGLMGSGIA 321
+F+ L ++ L ++FFAQR +K + K + +R AVIG G MG GI
Sbjct: 235 DLFQYLHTSGQAKALQYLFFAQRICNKWSTSSGASWKNSSAQPIRSAAVIGLGTMGRGIV 294
Query: 322 TAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE 381
+ NI V+ E + + L + + + + K+ + + A + + E
Sbjct: 295 VSLARANIPVIAVEQDEKQLELASRMVSFLLE--LEASKMQKSGQSWAAPKPRFTMSLEE 352
Query: 382 FKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGA 441
+VD+VIEAV E + LK+++FS+L C P L TNTS ++++ + T R+IG
Sbjct: 353 LGEVDLVIEAVFEEIGLKKQVFSKLSAICKPEAFLCTNTSALNIDEIASSTRHPQRVIGT 412
Query: 442 HFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQS 501
HFFSPAHVM LLE++ R+S I +M++ K +KKV VVVGNC GF NR FPY Q
Sbjct: 413 HFFSPAHVMTLLEVIPGRRSSPTTIATVMSLAKTMKKVGVVVGNCFGFVGNRMLFPYVQQ 472
Query: 502 ARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPD-------- 553
L+ G +D + FG +GPF++ DLAG + + + P
Sbjct: 473 TYFLLEEGSQPEEVDRVLEEFGFKMGPFRVSDLAGLDIGWKSRQGQGLTGPTLAPGTPAR 532
Query: 554 ---RSFQSPLVDLLLKSGRNGKANGKGLYTYEK--GSKPKPDPSVLPIIEECRRLSNIMP 608
R P+ D+L + GR G+ GKG Y Y++ G KPDP + + E R+ +I
Sbjct: 533 QRGRKRYCPIPDMLCEQGRFGQKTGKGWYRYDRPMGRIHKPDPWLSKFLSEYRKTHHIET 592
Query: 609 GGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWA 668
+PIS + EI+E L+ ++NE R+L EGI +D + G +P + GG +F+A
Sbjct: 593 --RPIS--QDEILERCLYALINEGFRILGEGIAAGPEHVDCIYINGFGWPKHTGGPMFYA 648
Query: 669 DAVGANYVYTSLKKWSQLYGNF--FKPSRFLEERATKGIP 706
VG V L+K+ + + +PS FL++ A++G P
Sbjct: 649 STVGLPTVLEKLQKYYRSNPDIPQLEPSHFLKKLASQGNP 688
>gi|33591862|ref|NP_879506.1| bifunctional enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase
[Bordetella pertussis Tohama I]
gi|384203165|ref|YP_005588904.1| bifunctional enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase
[Bordetella pertussis CS]
gi|33571505|emb|CAE44995.1| probable enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase,
bifunctional enzyme [Bordetella pertussis Tohama I]
gi|332381279|gb|AEE66126.1| bifunctional enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase
[Bordetella pertussis CS]
Length = 705
Score = 368 bits (944), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 242/700 (34%), Positives = 367/700 (52%), Gaps = 37/700 (5%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA++++ NPP+NAL+ + AGL EA + V+A+VL G F G DI F +
Sbjct: 21 VAVLSVDNPPINALSDTVRAGLCSALREAEADPAVRAVVLACEGNTFVAGADIREFARAK 80
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
GA + +P V IE C+KP+VAA+ G ALGGGLELA+ CH R+A +LGLP
Sbjct: 81 GAAEAIDVPAV--------IESCRKPVVAALHGQALGGGLELALACHGRVALAGCRLGLP 132
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 191
E+TLG+IPG TQRLPRL+GL A E++L +I +E + GL+DAV R
Sbjct: 133 EITLGLIPGGGGTQRLPRLIGLEAAAELILSGATIDAETARESGLLDAVWPDR-----LR 187
Query: 192 LWALDIAARRKPWIRSLHRTDKLG----SLSEAREVLKLARLQAKKTAPNMPQHQACLDV 247
A++ AA + R L S +++ K+A +++ A PQ A
Sbjct: 188 ERAIEFAASLADSPAGVRRASTLAHPPMSPQTGQDLRKIA--ESRPAALRAPQAGAAAVE 245
Query: 248 IEEGIVHGGYS-GVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 306
++ G E ++F L + SR L +FFA+R+ +V + D P
Sbjct: 246 ALSAAAQPDFARGRALERELFARLRDGEESRALRALFFAERSARRV-GLDDATSAPPMAH 304
Query: 307 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 366
AV+G G MG GIA A + V +V L + ++ I A+ R L RG++T+ A
Sbjct: 305 DAAVVGAGTMGRGIAIALADAGLRVRFIDVEQASLDRALEAIRAHYRSLAARGRMTEAAA 364
Query: 367 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 426
+A+ + D + D+V+EA E + +KQ IF +L+ P +LATNTST+D++
Sbjct: 365 RDAVARISPASDMQAAAEADVVVEAAFEDLAIKQAIFRQLDSIVRPGAVLATNTSTLDVD 424
Query: 427 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 486
+ T ++G HFFSPA+VM LLE+VR RT+ + + ++ +G+ + KV V VG C
Sbjct: 425 AIAAATRRPQDVVGTHFFSPANVMRLLEVVRGARTAPRTLGAVLALGRRMGKVCVTVGVC 484
Query: 487 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKE 546
GF NR ++ LL+ G ID A R FG +GP DLAG ++ +
Sbjct: 485 DGFVANRMSAHRARQIELLLQHGALPQDIDQAAREFGFSMGPCAATDLAGLDISWRIRR- 543
Query: 547 FDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSN 605
+ +SP+ D L + GR G+ G+G ++Y GS+ PDP V +I RR++
Sbjct: 544 ------GKGARSPIADALCELGRFGQKVGRGYFSYAPGSRVAVPDPEVEALI---RRMAE 594
Query: 606 IMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIV 665
+ G + S I + ++ PV+NE RVL++G+ +A D+D V G +P+ RGG +
Sbjct: 595 QL-GIRRQSFDLATITDRLILPVINEGARVLQDGVARQARDIDLIWVHGFGWPARRGGPM 653
Query: 666 FWADAVGANYVYTSLKKWSQ-LYGNFFKPSRFLEERATKG 704
F A+ VG V L + + L +P+ L + AT+G
Sbjct: 654 FHAERVGLASVCDRLARLADALEDASLQPAPLLRDLATRG 693
>gi|254283934|ref|ZP_04958902.1| peroxisomal bifunctional enzyme [gamma proteobacterium NOR51-B]
gi|219680137|gb|EED36486.1| peroxisomal bifunctional enzyme [gamma proteobacterium NOR51-B]
Length = 696
Score = 367 bits (943), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 239/707 (33%), Positives = 369/707 (52%), Gaps = 36/707 (5%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
D + +IT+ NPPVNA++ + +GL D + A + DD +A+++ G F G DI+ F K
Sbjct: 10 DAIGVITIDNPPVNAMSHAVRSGLVDALDTA-AEDDSQALLIICKGRTFIAGADISEFGK 68
Query: 73 VHGAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQ 130
P S L ++++++ K VAA+ G ALGGG E A+ C+ R A +
Sbjct: 69 ----------PPKSPTLRDMLDMLDSHPKLTVAAIHGTALGGGFETALCCNYRCALDTAK 118
Query: 131 LGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELL 187
+GLPE+ LG++PG TQR PRL G + AI ++ + +E+ GLID VV + L
Sbjct: 119 VGLPEVKLGLLPGAGGTQRTPRLAGAADAITLITQGNPMPAEQALTSGLIDQVVQGDLLA 178
Query: 188 ----KVSRLWALDIAARRKPWIRSLHRTDKLGSLS-EAREVLKLARLQAKKTAPNMPQHQ 242
V RL A D RR D SLS E RE + AR K Q
Sbjct: 179 GAVDYVHRLIAEDAPRRRA--------RDLPFSLSDEDREAIASARKSLAKKTRGEHAPQ 230
Query: 243 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 302
LD IE SG+ +E ++F + S + H+FFA+R +K+ + D + P
Sbjct: 231 RILDCIEAAATLDFNSGLARERELFDACMTDPQSAAMRHMFFAERQAAKIQGM-DPSVAP 289
Query: 303 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 362
R + V +IG G MG GIA I V L ++NS+ + G+ I N V RG+ +
Sbjct: 290 RDIGSVGIIGAGTMGGGIAMCFAQAGIPVTLLDMNSDAVTAGLDRIRKNYAISVKRGRFS 349
Query: 363 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 422
+++ N + ++G DY++ + D+VIEAV E++ +KQ +F L+ C ILA+NTS
Sbjct: 350 EEQVNAIMANIEGSSDYADLAETDLVIEAVFENLAVKQDVFRSLDSVCKADAILASNTSY 409
Query: 423 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 482
++ + TS ++G HFFSPA+VM LLE+VR +T ++I M VGK I KVPV+
Sbjct: 410 QSIDDIAAVTSRPQSVLGTHFFSPANVMKLLEVVRGAQTDDEIIATAMAVGKKIGKVPVL 469
Query: 483 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAA 542
G C GF NR Y + A+L + G +ID A+ +G+ +GP + DLAG +
Sbjct: 470 AGMCYGFIGNRMLRSYGREAQLCLIEGATPAQIDGAMERWGMAMGPIAVGDLAGLDIGYK 529
Query: 543 TSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVLPIIEECR 601
++ + + D L++ GR G+ +G G Y Y+ ++ + DPSV+ + +C
Sbjct: 530 AREQLTPEQKGKPASYIVADRLVEMGRLGQKSGAGYYQYDPETRARIEDPSVIELAAQCA 589
Query: 602 RLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYR 661
I K S+T++EIV+ + + NE R+LEEGI RASD+D G FP +R
Sbjct: 590 AELGI----KQRSITDEEIVDRLTLALANEGARILEEGIAQRASDIDVVYCFGYGFPRHR 645
Query: 662 GGIVFWADAVGANYVYTSLKKW-SQLYGNFFKPSRFLEERATKGIPL 707
GG ++ +A G + +K + L + ++ + L++ A G L
Sbjct: 646 GGPMWTIEARGLDNAVQRMKALGNSLDADNWQVAPLLQQLAESGESL 692
>gi|443718591|gb|ELU09144.1| hypothetical protein CAPTEDRAFT_144302 [Capitella teleta]
Length = 713
Score = 367 bits (943), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 254/727 (34%), Positives = 386/727 (53%), Gaps = 60/727 (8%)
Query: 10 VGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINV 69
+ DGVA++ + NPPVNAL+ + +++ ++A +K+IV++G G F G DI
Sbjct: 5 IARDGVALLQVNNPPVNALSHHVRVAIEEGLKKAGQDPRIKSIVISGKGS-FIAGADIK- 62
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKT 129
DVS P + +EL +LIE KP+VAA++G ALGGG E+A+ CH RIA K+
Sbjct: 63 --------DVS-KPTI-LELC-DLIESSGKPVVAAIKGFALGGGHEIAISCHYRIAHEKS 111
Query: 130 QLGLPELTLGVIP---GTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS--- 183
+ G PE+ +G++P GTQR PRLVGL A++++ + I + + +KLG++D VV
Sbjct: 112 KFGFPEVDIGILPAAGGTQRFPRLVGLEAALDLIPSGRHIGAAQAFKLGIVDKVVRGDAV 171
Query: 184 EELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQA 243
EE +K ++ A + R RT + + L A A K M
Sbjct: 172 EEAVKFAKSIAGEPLVDR--------RTSQRPVMGAENAFLAAAVKLAMKKKKGMIAPIV 223
Query: 244 CLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSR---GLVHVFFAQRATSK--VP-NVTD 297
CL V G + G+ EA E V++ TS L + FFAQRA K +P +
Sbjct: 224 CLSVSFMGSLLPFEQGIQVEAA---EAVVVFTSGQMGALQYAFFAQRAAPKWLLPCGASF 280
Query: 298 IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 357
+K R +R AVIG G MG+GI A + I V L E + ++L KG+ ++ G V+
Sbjct: 281 KTVKGRPIRNAAVIGAGTMGTGITMAMLNAGIPVTLVEQDRKFLDKGVSLLKLLYAGSVS 340
Query: 358 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 417
K+TQD+ + L L + Y +VD+VIEAV E++ LK++IF+EL++ CPP L
Sbjct: 341 LRKITQDQCDAILSKLNTAVGYKSLTNVDLVIEAVYENMALKKQIFAELDRICPPETFLW 400
Query: 418 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 477
TNTS +D++ + T D+++G HFF PA+ M LLE VR + TSA+ + G I
Sbjct: 401 TNTSALDIDEIASATRRPDKVLGTHFFVPAYHMKLLENVRGKLTSAETVASAQMFGTRIG 460
Query: 478 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGY 537
K+PVVVGNC GF NR Y A L+ G +D +FGLP+GPF++ DL+G
Sbjct: 461 KIPVVVGNCHGFVGNRMLHKYVYEADFLIEEGCWPEDVDMVAENFGLPLGPFKVRDLSGL 520
Query: 538 GV--------AAATSKEFDKAFPDRSFQSPLVDLLLKS----GRNGKANGKGLYTYEK-- 583
+ A A E + A R + LL KS G G+ G+G Y Y K
Sbjct: 521 DIRVRGLLEQAKAAGIEINPA--TRFLNGERISLLSKSLVDKGHCGRKTGRGFYNYGKPG 578
Query: 584 GSKPKPDPSVLP-IIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVV 642
G P D + I+E C G + V +EI E + P++NE ++LEEGI
Sbjct: 579 GKIPLNDRFIKDVIVEYCAER-----GIERRKVAYQEIEERLFLPLINEGFKILEEGIAS 633
Query: 643 RASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN--FFKPSRFLEER 700
+ D+D +LG ++P + GG +++A+ VG + +Y + +++L+ + ++PS L++
Sbjct: 634 KPEDIDTIWLLGYAWPRHTGGPMYYANMVGLDKIYNRICHYNELHKHSAHWQPSLLLKKL 693
Query: 701 ATKGIPL 707
A P+
Sbjct: 694 AASKTPM 700
>gi|390567210|ref|ZP_10247558.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia terrae BS001]
gi|389940910|gb|EIN02691.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia terrae BS001]
Length = 706
Score = 367 bits (943), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 234/699 (33%), Positives = 376/699 (53%), Gaps = 19/699 (2%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+ ++T+ NPPVNAL + L+D + A DV A++L G G F GG DI F
Sbjct: 18 ILVVTVDNPPVNALGANVRRQLRDAIQAAEKDPDVDAVLLVGAGRNFIGGADIREF---- 73
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G L P S+ V N IE C+KP+VAA+ G ALGGGLE+A+ H RIA +LGLP
Sbjct: 74 --GKPPLPP--SLPEVCNTIEACRKPVVAAIHGAALGGGLEVALAAHFRIALGAARLGLP 129
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 191
E+TLG++PG TQR PRLVG A+++ML + + ++E LGL+D V ++++L
Sbjct: 130 EVTLGLLPGAGGTQRAPRLVGAKAALDLMLSGRHVGAKEAHALGLVDLVGETDDVLAEGL 189
Query: 192 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 251
+ + + P +R D L + +R ++ AR ++ K + + +D ++
Sbjct: 190 AYVQALLDAQAP-VRRTRDADGLADRAASRAAIEAARAESSKKSHGLFSPLKIVDAVQAA 248
Query: 252 IVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVI 311
+ G+ E ++F + + GL+H F A+R K P + KPR + V V+
Sbjct: 249 LELPFDDGLRHERQLFLQCLDSPQRAGLIHAFLAEREVLKAPETRNA--KPRKIASVGVV 306
Query: 312 GGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALK 371
GGG MG+GIA A + + V + E + L +G+ IE L+ +G++T + L
Sbjct: 307 GGGTMGAGIAVAVLDAGLPVTMIERDDVSLARGLAHIEKVYDNLIAKGRMTPEAKAAVLA 366
Query: 372 MLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEK 431
G Y D+VIEAV E + +K +F++L++ C P +LATNTS +D++ +
Sbjct: 367 RWNGSTSYDALGTADLVIEAVFEEMTVKHAVFAKLDRVCKPGAVLATNTSYLDIDAIAAS 426
Query: 432 TSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAV 491
S ++G HFFSPA++M LLE+V + SA V+ + K ++KVPV G C GF
Sbjct: 427 VSRPGDVVGLHFFSPANIMKLLEVVVPAQVSADVVATAFDLAKKLRKVPVRAGVCDGFIG 486
Query: 492 NRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAF 551
NR Y +A ++ G ++ID A+R+FG P+GPFQ+ DLAG + AT K
Sbjct: 487 NRVLAIYRAAADHMMEDGASPYQIDRAVRAFGFPMGPFQVADLAGGDIGWATRKRRAATR 546
Query: 552 PDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKP-KPDPSVLPIIEECRRLSNIMPGG 610
+ + D + + G G+ G+G Y Y G++ KPDP V II+ R + + P
Sbjct: 547 DPQQRYVQIADRICERGWFGQKTGRGYYVYADGARTGKPDPEVESIIDAERERAGVTPR- 605
Query: 611 KPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADA 670
+ +++EI+ + ++NE V+ + I +R D+D + G FP +RGG + +AD
Sbjct: 606 ---AFSDEEIMRRYMAAMINEGANVVHQRIALRPLDVDVTFLYGYGFPRHRGGPMQYADT 662
Query: 671 VGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSA 709
VG + V +++++Q F++PS + + +G L++
Sbjct: 663 VGLDKVLADIREFAQQDPVFWQPSPLIVDLVERGATLAS 701
>gi|119478556|ref|ZP_01618499.1| fatty oxidation complex, alpha subunit [marine gamma
proteobacterium HTCC2143]
gi|119448460|gb|EAW29709.1| fatty oxidation complex, alpha subunit [marine gamma
proteobacterium HTCC2143]
Length = 699
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 230/699 (32%), Positives = 383/699 (54%), Gaps = 21/699 (3%)
Query: 14 GVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKV 73
GV II L NPPVNAL+ + G+++ A D+ + +++ G F G DI F K
Sbjct: 11 GVGIIRLNNPPVNALSQVLREGIQNAVVAAQG-DESQVLLIVCEGRTFVAGADITEFGKP 69
Query: 74 HGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGL 133
A S+ +++ IE+ KP++AA+ G ALGGG E+A+ H R A ++GL
Sbjct: 70 AKAP--------SLPSILDSIENSVKPVIAAIHGTALGGGFEIALAAHYRCALASAKVGL 121
Query: 134 PELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVS 190
PE+ LG+IPG TQR PR++G+ A++M+ + + + +GL+D ++ + LL+ +
Sbjct: 122 PEVKLGIIPGAGGTQRTPRIIGVDAALDMITSGNPVAAAKAHSMGLVDHIINGD-LLEGA 180
Query: 191 RLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 250
+A + A P R T + ++A + R + K + Q +D ++
Sbjct: 181 MSYAERLIADNAPCKRVSDMTIDPATATDA--LFDSWRKKMAKKSRGQLAPQKIIDAVQI 238
Query: 251 GIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAV 310
+ G++KE ++F E V S + H+FFA+RA +KV ++ + R + KV +
Sbjct: 239 AVTSSVPEGMVKERELFTECVQSTQSSAMRHIFFAERAAAKVNDLAKDTVD-RTISKVGI 297
Query: 311 IGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNAL 370
+GGG MG GIA I VV+ E+N + L +G+ + N V++GKL++++ + L
Sbjct: 298 LGGGTMGGGIAMNFANVGIPVVMIEINDDALARGLDIVRKNYSITVSKGKLSEEQMKDCL 357
Query: 371 KMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGE 430
++ G +Y + DVD+VIEAV E + +K+++F++L+KAC ILATNTS D++ +
Sbjct: 358 SLISGSTNYDDLGDVDLVIEAVFEDLDVKKEVFAKLDKACKQGAILATNTSYQDVDKIAA 417
Query: 431 KTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFA 490
T+ D +IG HFFSPA+VM LLE+VR E+T+ VI M + K I K+PV+ G C GF
Sbjct: 418 ATTRPDDVIGMHFFSPANVMKLLEVVRGEKTAGDVISTTMKLAKKINKIPVLSGVCYGFI 477
Query: 491 VNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKA 550
NR + +L + G ++D+ ++ +G+ +GP + DLAG V+ + +
Sbjct: 478 GNRMLRCSVRENQLCMMEGASPEQVDAVMQGWGMAMGPLAVGDLAGLDVSYKARQALTEE 537
Query: 551 FPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVLPIIEECRRLSNIMPG 609
+VD +++ GR G+ +G G Y Y+ ++ + DP V+ +IE I
Sbjct: 538 QKGDPKSYCIVDAMVEMGRLGQKSGAGYYRYDPDTRARSSDPEVMAVIERLSAEHAI--- 594
Query: 610 GKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWAD 669
+ +++ EI+ I +NE +L+EGI R+SD+D V G FP YRGG + +AD
Sbjct: 595 -ERREISDDEILNRITCAWINEGAYILQEGIAQRSSDIDVVYVNGYGFPIYRGGPMHYAD 653
Query: 670 AVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLS 708
+G VY + ++ + +G+ +KPS LE+ A + S
Sbjct: 654 TIGVKKVYDMICEFQRQHGDVWKPSALLEQLAAENKTFS 692
>gi|148553249|ref|YP_001260831.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingomonas wittichii RW1]
gi|148498439|gb|ABQ66693.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
[Sphingomonas wittichii RW1]
Length = 748
Score = 367 bits (941), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 234/708 (33%), Positives = 369/708 (52%), Gaps = 32/708 (4%)
Query: 5 RVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGG 64
+++ V D + I NPPVNAL + +G+ + + + VKAIVL G F G
Sbjct: 52 KISTRVEGD-IGFIRSDNPPVNALGQAVRSGVVEALDRLNADPAVKAIVLHCEGRTFFAG 110
Query: 65 FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
DI F K +P E+++ IE+ KP+VAAV G ALGGG E A+GC R+
Sbjct: 111 ADITEFNKPR-------VPPTLQEMIL-AIENSPKPVVAAVHGTALGGGFETALGCPFRV 162
Query: 125 AAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVV 181
A P ++GLPE+ LG+ G TQRLPR++G KA+E +L K + + + LG++DAV
Sbjct: 163 AVPSARMGLPEINLGLFAGGGGTQRLPRIIGPEKALEFVLSGKPVGAAQALALGILDAVE 222
Query: 182 TSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 241
+ +A + + P + R D++ + L AK TA + Q
Sbjct: 223 DGAPD-AIGAAFARRVIDEKLPAVAVSRRDDRIAATRADPSAFDA--LAAKLTARSKGQE 279
Query: 242 QACLDV--IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIG 299
+V + + +A+ + L+ SR L H+FFA+R +++P +
Sbjct: 280 APAANVAAVRRSFTLPFDEAMAIDAEANRALMAGSQSRALRHLFFAEREAARIPGLPK-D 338
Query: 300 LKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRG 359
+ R V A+IG G MG GIA I VV+ + E L +G++ + AN V RG
Sbjct: 339 ARARDVASAAIIGAGTMGGGIAMCFAGAGIPVVIVDTTQEALDRGMERVRANYATSVKRG 398
Query: 360 KLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATN 419
++Q++ + L ++ D + D D+VIEAV E + +K++IFS+LEK P +LA+N
Sbjct: 399 SISQEQVDKRLALITPATDRAAVADADLVIEAVFEDMAVKKEIFSDLEKRVKPGTVLASN 458
Query: 420 TSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKV 479
TS +D++ + + +G HFFSPA+VM LLE+V+ ++S + IL M VG+ I KV
Sbjct: 459 TSALDVDEIAAALDRPEDFVGMHFFSPANVMKLLEVVQAAKSSPEAILTAMAVGRKIGKV 518
Query: 480 PVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGV 539
PV GNC GF NR S A L+ G ++D+A+ G P+GP D++G +
Sbjct: 519 PVWSGNCDGFIGNRMVAKRSAQAERLLQRGAFPPQVDAALTKLGFPMGPLTTNDMSGLDI 578
Query: 540 AAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIE 598
A K F P+ D +++SG+ G+ G G Y YE G + P+P+P +I
Sbjct: 579 GYAIRKRRGTPF-------PIADAIVESGQLGQKTGSGYYRYEPGDRTPRPNPDTDALIV 631
Query: 599 ECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFP 658
++ G + ++E E+VE +LFP++NE R++E GI +R SD+D + G +P
Sbjct: 632 A----TSAKLGIERREMSEGEMVERLLFPLINEGARIVEAGIALRPSDVDLVWINGYGWP 687
Query: 659 SYRGGIVFWADAVGANYVYTSLKKWSQLYGN--FFKPSRFLEERATKG 704
+ GG +F AD G ++ L++++ + +P+ L E A KG
Sbjct: 688 RHLGGPMFHADETGLAHIVARLREFAADTPDDPSLEPAPLLVELAAKG 735
>gi|89901371|ref|YP_523842.1| 3-hydroxyacyl-CoA dehydrogenase [Rhodoferax ferrireducens T118]
gi|89346108|gb|ABD70311.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
[Rhodoferax ferrireducens T118]
Length = 706
Score = 367 bits (941), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 237/696 (34%), Positives = 370/696 (53%), Gaps = 23/696 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+ ++ + NPPVNAL + + G+ + A + V+A+++ G G F G DI F
Sbjct: 18 ILLVMINNPPVNALGVAVRCGIVAAIDAADADPAVQAVLIIGTGRNFIAGADIREF---- 73
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G L P S+ V N IE C KP+VAA+ G ALGGGLE+A+ H R+AA +LGLP
Sbjct: 74 --GKPPLPP--SLPDVCNRIEACSKPVVAAIHGAALGGGLEIALAAHYRLAATDVKLGLP 129
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 191
E+ LG++PG TQR PRL+G A+++ML + + +EE LGL+D + S ++L
Sbjct: 130 EVQLGLMPGAGGTQRTPRLIGAKAALDLMLSGRHMGAEEAHALGLVDRLGHSNDILADGL 189
Query: 192 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 251
+ ++ A P +R L R ++ R + K + + ++ +E
Sbjct: 190 AYTQELLATHAP-VRRTRDAQALSDRQANRASIEAVRAETGKKSRGLFSPLKIVEAVEAA 248
Query: 252 IVHGGYSGVLKEAKVFKELVMLDTSR--GLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 309
+ G+ E ++F L LD+++ GL+H FFA+R K P + KPR + V
Sbjct: 249 LDKSFDEGLRIERELF--LQCLDSAQRAGLIHAFFAEREVLKAPETRNT--KPRAIAHVG 304
Query: 310 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 369
V+GGG MG+GIA A + + V + E + L +G IE GL+ +G++T D
Sbjct: 305 VVGGGTMGAGIAVAVLDAGLSVTMIERDEAALARGHAHIEKVYNGLIAKGRMTTDAKAAN 364
Query: 370 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 429
L G Y D+VIEAV E + +KQ +F+EL++ C P +LATNTS +D++++
Sbjct: 365 LARFVGSTSYDALAPADIVIEAVFEDMAVKQAVFAELDRVCKPGAVLATNTSYLDIDVIA 424
Query: 430 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 489
S ++G HFFSPA++M LLEIV + SA V+ + K + KVPV G C GF
Sbjct: 425 ASISRPADVVGLHFFSPANIMKLLEIVVPAKVSADVVATAFELAKKLHKVPVRAGVCDGF 484
Query: 490 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDK 549
NR Y +A ++ G ++ID A+R FG P+GPFQ+ DLAG + AT K
Sbjct: 485 IGNRILAAYRMAADYMMEDGASPYQIDQAVRDFGYPMGPFQVSDLAGGDIGWATRKRKAA 544
Query: 550 AFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKP-KPDPSVLPIIEECRRLSNIMP 608
R+ + D + + G G+ G+G Y Y +G++ PDP + II+ R + I P
Sbjct: 545 TRDPRARYVQIADRICERGWFGQKTGRGYYLYPEGARTGTPDPEIEAIIDAERARAGITP 604
Query: 609 GGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWA 668
S T +EI+ + ++NE V+ + I +R D+D + G FP +RGG + +A
Sbjct: 605 R----SFTNEEIMRRYMAAMINEGANVVHQRIALRPLDVDVTFLYGYGFPRHRGGPMKYA 660
Query: 669 DAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
D +G V ++++++ F++PS L E +G
Sbjct: 661 DTLGLPKVLADIREFAKEDPLFWQPSPLLVELVERG 696
>gi|410897016|ref|XP_003961995.1| PREDICTED: peroxisomal bifunctional enzyme-like [Takifugu rubripes]
Length = 718
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 251/717 (35%), Positives = 377/717 (52%), Gaps = 50/717 (6%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVF-QKV 73
V +ITL NPPVNAL+ + G+ D + A VK++V+ G G F GG DI F +++
Sbjct: 11 VGLITLQNPPVNALSASVRQGIVDSVKRALGDQKVKSVVICGQNGVFCGGADIREFGRQM 70
Query: 74 HGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGL 133
G V ++ D IE KP+VAA+EG ALGGGLELA+GCH RI+ K +LGL
Sbjct: 71 SGPPLVPMIHD---------IEAANKPVVAAIEGSALGGGLELALGCHYRISHSKAKLGL 121
Query: 134 PELTLGVIP---GTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVS 190
PE+TLG++P GTQRLPRL+G+ A+ ++ + +T+ E +LG++D V T + V+
Sbjct: 122 PEVTLGLLPAAGGTQRLPRLIGVPAALNLITTGRHVTAAEALQLGILDHV-TEHNTVDVA 180
Query: 191 RLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 250
+AL + R + LS+ + + A L+ + A AC+ +
Sbjct: 181 VKFALSVTGESLDGRRI--SSFSCAPLSDLDSLFEEAMLKVRGAARGAIAPVACVQAVRA 238
Query: 251 GIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGL---KPRGVRK 307
G+ +E ++ L +R L + FFAQRA + + +PR VRK
Sbjct: 239 AATLPYAQGMEREKELMATLFHSGQARALQYFFFAQRAVGRWSTPSGARWDTSQPRPVRK 298
Query: 308 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 367
AVIG G MG GI A + VV E +++ L++ K + + ++ RG T + +
Sbjct: 299 AAVIGLGTMGRGITVALAQAGLSVVAVETHAKQLMEAKKAVPSMLKRGAVRGGTTIEPDS 358
Query: 368 NALKMLKGVLDYSE----FKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI 423
+ YSE DVD+VIEAV E + LK+K+F +L C P +L TNTS++
Sbjct: 359 ---------ITYSETVQAVADVDLVIEAVFEDMALKEKVFQQLSIVCKPDTLLCTNTSSL 409
Query: 424 DLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVV 483
D++ + +T + ++G HFF+PAHVM LLE+V R+S + M +GK + KV V V
Sbjct: 410 DVDHLASQTRHPELVVGMHFFAPAHVMKLLEVVYGRRSSPAAVATAMQLGKKMGKVSVAV 469
Query: 484 GNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAAT 543
GNC GFA NR Y + A L+ G +D A+ FG P+G F++ DL+G V
Sbjct: 470 GNCRGFAGNRMLKRYLEQAFFLLEEGATPELVDRALEEFGFPMGVFRMSDLSGLDVGWRV 529
Query: 544 SKE---FDKAFPDRSFQ-------SPLVDLLLKSGRNGKANGKGLYTYEK--GSKPKPDP 591
K D + S + SPL DLL + GR G+ G+G Y Y+K G K DP
Sbjct: 530 RKADGLADTSLTGTSARVRQGCRYSPLGDLLCEHGRFGQKTGRGWYQYDKPGGRVAKSDP 589
Query: 592 SVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDAS 651
+ ++E R ++ P + ++E++E LF ++NE ++LEEGI D+D
Sbjct: 590 WLHNFLDEYRARHGLV----PRCIDQQEVLERCLFVLINEGFQILEEGIAAGPEDIDAIY 645
Query: 652 VLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN--FFKPSRFLEERATKGIP 706
V G +P +RGG +F+AD VG V L+++ Q + N + +PS L G P
Sbjct: 646 VFGYGWPRHRGGPMFYADMVGLERVVERLERYHQAHPNVPYLQPSGLLRRLVANGSP 702
>gi|53724340|ref|YP_104708.1| fatty oxidation complex subunit alpha [Burkholderia mallei ATCC
23344]
gi|67640367|ref|ZP_00439176.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia mallei GB8 horse 4]
gi|121601249|ref|YP_991561.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia mallei SAVP1]
gi|124386354|ref|YP_001027365.1| fatty oxidation complex subunit alpha [Burkholderia mallei NCTC
10229]
gi|126450585|ref|YP_001082330.1| enoyl-CoA hydratase [Burkholderia mallei NCTC 10247]
gi|167003208|ref|ZP_02268998.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia mallei PRL-20]
gi|254175157|ref|ZP_04881818.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia mallei ATCC 10399]
gi|254201805|ref|ZP_04908169.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia mallei FMH]
gi|254207134|ref|ZP_04913485.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia mallei JHU]
gi|52427763|gb|AAU48356.1| fatty oxidation complex, alpha subunit, putative [Burkholderia
mallei ATCC 23344]
gi|121230059|gb|ABM52577.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia mallei SAVP1]
gi|124294374|gb|ABN03643.1| putative fatty oxidation complex, alpha subunit [Burkholderia
mallei NCTC 10229]
gi|126243455|gb|ABO06548.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia mallei NCTC 10247]
gi|147747699|gb|EDK54775.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia mallei FMH]
gi|147752676|gb|EDK59742.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia mallei JHU]
gi|160696202|gb|EDP86172.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia mallei ATCC 10399]
gi|238521067|gb|EEP84521.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia mallei GB8 horse 4]
gi|243061205|gb|EES43391.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia mallei PRL-20]
Length = 708
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 240/697 (34%), Positives = 360/697 (51%), Gaps = 19/697 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D V ++T+ +PPVNAL+ + GL D + A + V A+++ G G F G DI F
Sbjct: 17 RDKVLVVTIDHPPVNALSADVRRGLVDALDAADADAAVGAVLIVGAGRNFIAGADIREFG 76
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K+ L+PDV N IE KP+V A+ G ALGGGLE+A+ H R+A P +L
Sbjct: 77 KLPVP---PLLPDV-----CNRIETSGKPVVVALHGAALGGGLEVALAAHYRLAVPGAKL 128
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
GLPE+ LG++PG TQR PRL+G A+E+ML + ++EE LGL+D + S++ L
Sbjct: 129 GLPEVQLGLLPGAGGTQRTPRLIGAKAALELMLSGRHASAEEALALGLVDRLAHSDDTLA 188
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 248
+ ++ A +R L + A L AR + + + +D +
Sbjct: 189 EGLAYVHELLAA-GAGVRRTRDAQGLADRAAAEAALDAARADVARHSRGLFSPARIVDAV 247
Query: 249 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 308
+ G+ E ++F E + GLVH FFAQR +K P T G PR + ++
Sbjct: 248 AAALAQPFDEGLRTERRLFVECLDSPQRAGLVHAFFAQREAAKSPE-TRRG-APRAIERI 305
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
V+GGG MG+GIA A + V + E + L +G +E GLV +G++T
Sbjct: 306 GVVGGGTMGAGIAVAALDAGFPVTMIERDDASLERGRAHVEKVYAGLVAKGRMTPAAQAA 365
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
L KG Y D+VIEAV E + +K+ +F+EL +AC P +LATNTS +D++ +
Sbjct: 366 RLARFKGGTSYEALAQADVVIEAVFEDMAVKKAVFAELARACKPGAVLATNTSYLDIDEL 425
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
+IG HFFSPA++M LLE+V + SA V+ + + + K+PV G C G
Sbjct: 426 AASVERAPDVIGLHFFSPANIMKLLEVVVPAKVSADVVATAFELARKLGKIPVRAGVCDG 485
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR Y +A ++ G ++ID AIR FG P+GP+Q++DLAG + AT K
Sbjct: 486 FIGNRVLAVYRTAADYMMEDGASPYQIDRAIREFGFPMGPYQVVDLAGGDIGWATRKRRA 545
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIM 607
R + D L + G G+ G+G Y Y G++ PDP V II + R +
Sbjct: 546 PTRDPRLRYVEIGDRLCERGWFGQKTGRGYYLYPDGARVGTPDPEVEAIIAQARAAKGV- 604
Query: 608 PGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFW 667
P + T++EIV L ++NE V+ E I +R D+D + G FP +R G + +
Sbjct: 605 ---SPRAFTDEEIVRRYLAAMINEGANVVHEKIALRPLDVDAVFLHGYGFPRHRDGPMHY 661
Query: 668 ADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
AD VG V ++ ++ F+KPS L + +G
Sbjct: 662 ADTVGLANVLADIRAFAGEDPVFWKPSPLLVDLVARG 698
>gi|83721254|ref|YP_440951.1| fatty oxidation complex subunit alpha [Burkholderia thailandensis
E264]
gi|167617743|ref|ZP_02386374.1| fatty oxidation complex, alpha subunit, putative [Burkholderia
thailandensis Bt4]
gi|257140395|ref|ZP_05588657.1| fatty oxidation complex, alpha subunit, putative [Burkholderia
thailandensis E264]
gi|83655079|gb|ABC39142.1| fatty oxidation complex, alpha subunit, putative [Burkholderia
thailandensis E264]
Length = 708
Score = 366 bits (939), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 239/697 (34%), Positives = 357/697 (51%), Gaps = 19/697 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D V ++T+ +PPVNAL+ + GL D + A + V A+++ G G F G DI F
Sbjct: 17 RDKVLVVTIDHPPVNALSADVRRGLVDALDAADADAAVGAVLIVGAGRNFIAGADIREFG 76
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K + V N IE KP+V A+ G ALGGGLE+A+ H RIA P +L
Sbjct: 77 KPPVP--------PLLPDVCNRIETSGKPVVVALHGAALGGGLEIALAAHYRIAVPGAKL 128
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
GLPE+ LG++PG TQR PRL+G A+++ML + ++EE LGL+D + S++ L
Sbjct: 129 GLPEVQLGLLPGAGGTQRTPRLIGAKAALDLMLSGRHASAEEALTLGLVDRLAHSDDTLA 188
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 248
+ ++ A P R+ + + AKK+ + +D +
Sbjct: 189 EGLAYVHELLAAGAPARRTRDAQGLADRAAAEAALEAARADVAKKSR-GLFSPAKIVDAV 247
Query: 249 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 308
+ G+ E ++F E + GLVH FFA+R +K P T G+ PR + ++
Sbjct: 248 AAALALPFDEGLRTERRLFVECLDSPQRAGLVHAFFAEREAAKSPE-TRRGV-PRAIERI 305
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
V+GGG MG+GIA A + V + E + L +G +E GLV +G++T
Sbjct: 306 GVVGGGTMGAGIAVAALDAGFPVTMIERDDASLERGRAHVEKVYAGLVAKGRMTPAAQAA 365
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
L KG Y D+VIEAV E + +K+ +F+EL +AC P +LATNTS +D++ +
Sbjct: 366 RLARFKGGTSYDALAQADVVIEAVFEDMAVKKSVFAELARACKPGAVLATNTSYLDIDEI 425
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
+IG HFFSPA++M LLE+V + SA V+ + K ++K+PV G C G
Sbjct: 426 AASVERTPDVIGLHFFSPANIMKLLEVVVPAKVSADVVATAFELAKKLRKIPVRAGVCDG 485
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR Y +A ++ G ++ID AIR FG P+GP+Q++DLAG + AT K
Sbjct: 486 FIGNRVLAVYRTAADYMMEDGASPYQIDRAIREFGFPMGPYQVVDLAGGDIGWATRKRRA 545
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKP-KPDPSVLPIIEECRRLSNIM 607
R + D L + G G+ G+G Y Y G++ PDP V II E R +
Sbjct: 546 PTRDPRLRYVEIGDRLCERGWFGQKTGRGYYLYPDGARAGAPDPEVEAIIAEARAKKGV- 604
Query: 608 PGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFW 667
P + T+ EIV L ++NE V+ E I +R D+D + G FP YRGG + +
Sbjct: 605 ---SPRAFTDDEIVRRYLAAMINEGANVVHEKIALRPLDVDAVFLHGYGFPRYRGGPMHY 661
Query: 668 ADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
AD VG V ++ ++ F+KPS L + +G
Sbjct: 662 ADTVGLANVLADIRAFASEDPVFWKPSPLLVDLVARG 698
>gi|167579665|ref|ZP_02372539.1| fatty oxidation complex, alpha subunit, putative [Burkholderia
thailandensis TXDOH]
Length = 708
Score = 366 bits (939), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 239/697 (34%), Positives = 357/697 (51%), Gaps = 19/697 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D V ++T+ +PPVNAL+ + GL D + A + V A+++ G G F G DI F
Sbjct: 17 RDKVLVVTIDHPPVNALSADVRRGLVDALDAADADAAVGAVLIVGAGRNFIAGADIREFG 76
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K + V N IE KP+V A+ G ALGGGLE+A+ H RIA P +L
Sbjct: 77 KPPVP--------PLLPDVCNRIETSGKPVVVALHGAALGGGLEIALAAHYRIAVPGAKL 128
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
GLPE+ LG++PG TQR PRL+G A+++ML + ++EE LGL+D + S++ L
Sbjct: 129 GLPEVQLGLLPGAGGTQRTPRLIGAKAALDLMLSGRHASAEEALTLGLVDRLAHSDDTLA 188
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 248
+ ++ A P R+ + + AKK+ + +D +
Sbjct: 189 EGLAYVHELLAAGAPARRTRDAQGLADRAAAEAALEAARADVAKKSR-GLFSPAKIVDAV 247
Query: 249 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 308
+ G+ E ++F E + GLVH FFA+R +K P T G+ PR + ++
Sbjct: 248 AAALALPFDEGLRTERRLFVECLDSPQRAGLVHAFFAEREAAKSPE-TRRGV-PRAIERI 305
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
V+GGG MG+GIA A + V + E + L +G +E GLV +G++T
Sbjct: 306 GVVGGGTMGAGIAVAALDAGFPVTMIERDDASLERGRAHVEKVYAGLVAKGRMTPAAQAA 365
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
L KG Y D+VIEAV E + +K+ +F+EL +AC P +LATNTS +D++ +
Sbjct: 366 RLARFKGGTSYDALAQADVVIEAVFEDMAVKKAVFAELARACKPGAVLATNTSYLDIDEI 425
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
+IG HFFSPA++M LLE+V + SA V+ + K ++K+PV G C G
Sbjct: 426 AASVERTPDVIGLHFFSPANIMKLLEVVVPAKVSADVVATAFELAKKLRKIPVRAGVCDG 485
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR Y +A ++ G ++ID AIR FG P+GP+Q++DLAG + AT K
Sbjct: 486 FIGNRVLAVYRTAADYMMEDGASPYQIDRAIREFGFPMGPYQVVDLAGGDIGWATRKRRA 545
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKP-KPDPSVLPIIEECRRLSNIM 607
R + D L + G G+ G+G Y Y G++ PDP V II E R +
Sbjct: 546 PTRDPRLRYVEIGDRLCERGWFGQKTGRGYYLYPDGARAGAPDPEVEAIIAEARAKKGV- 604
Query: 608 PGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFW 667
P + T+ EIV L ++NE V+ E I +R D+D + G FP YRGG + +
Sbjct: 605 ---SPRAFTDDEIVRRYLAAMINEGANVVHEKIALRPLDVDAVFLHGYGFPRYRGGPMHY 661
Query: 668 ADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
AD VG V ++ ++ F+KPS L + +G
Sbjct: 662 ADTVGLANVLADIRAFASEDPVFWKPSPLLVDLVARG 698
>gi|424902006|ref|ZP_18325522.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia thailandensis MSMB43]
gi|390932381|gb|EIP89781.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia thailandensis MSMB43]
Length = 708
Score = 366 bits (939), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 248/713 (34%), Positives = 357/713 (50%), Gaps = 33/713 (4%)
Query: 3 APRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFS 62
AP D V ++T+ +PPVNAL+ + GL D + A + V A+++ G G F
Sbjct: 8 APGAVTRERRDKVLVVTIDHPPVNALSAGVRRGLVDALDAADADAAVCAVLIVGAGRNFI 67
Query: 63 GGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHA 122
G DI F K + V N IE KP+V A+ G LGGGLE+A+ H
Sbjct: 68 AGADIREFGKPPVP--------PLLPDVCNRIEASGKPVVVALHGATLGGGLEIALAAHY 119
Query: 123 RIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDA 179
RIA P +LGLPE+ LG++PG TQR PRLVG A+E+ML + +EE LGL+D
Sbjct: 120 RIAVPGAKLGLPEVQLGLLPGAGGTQRTPRLVGAKAALELMLSGRHAPAEEALTLGLVDR 179
Query: 180 VVTSEELLK-----VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAK-- 232
+ S++ L V L A +ARR D G A L +A
Sbjct: 180 LAHSDDTLAEGLAYVHELLAAGASARRT--------RDAQGLADRAAAEAALDAARADVA 231
Query: 233 KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 292
K + + +D + + G+ E ++F E + GLVH FFA+R +K
Sbjct: 232 KKSRGLFSPAKIVDAVAAALAQPFDEGLRTERRLFVECLDSPQRAGLVHAFFAEREAAKS 291
Query: 293 PNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANV 352
P PR + ++ V+GGG MG+GIA A + V + E + L +G +E
Sbjct: 292 PETRRAA--PRAIERIGVVGGGTMGAGIAVAALDAGFPVTMIERDDASLERGRAHVEKVY 349
Query: 353 RGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPP 412
GLV +G++T L L G Y D+VIEAV E + +K+ +F+EL +AC P
Sbjct: 350 AGLVAKGRMTPAAQAARLARLTGGTSYEALAQADVVIEAVFEDMAVKKAVFAELARACKP 409
Query: 413 HCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTV 472
+LATNTS +D++ + +IG HFFSPA++M LLE+V + SA V+ +
Sbjct: 410 GAVLATNTSYLDIDELAASVERAPDVIGLHFFSPANIMKLLEVVVPAKVSADVVATAFEL 469
Query: 473 GKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLL 532
K +KK+PV G C GF NR Y +A ++ G +RID AIR FG P+GP+Q++
Sbjct: 470 AKKLKKIPVRAGVCDGFIGNRVLAVYRTAADYMMEDGASPYRIDRAIREFGFPMGPYQVV 529
Query: 533 DLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDP 591
DLAG + AT K R + D L + G G+ G+G Y Y G++ PDP
Sbjct: 530 DLAGGDIGWATRKRRAPTRDPRLRYVEIGDRLCERGWFGQKTGRGYYLYPDGARVGTPDP 589
Query: 592 SVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDAS 651
V II E R + P + T+ EIV L ++NE V+ E I +R D+D
Sbjct: 590 EVEAIIAEERAKKGV----SPRAFTDDEIVRRYLAAMINEGANVVHERIALRPLDVDAVF 645
Query: 652 VLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+ G FP +RGG + +ADAVG V ++ ++ F+KPS L + +G
Sbjct: 646 LHGYGFPRHRGGPMHYADAVGLANVLADIRAFASEDPVFWKPSPLLVDLVARG 698
>gi|170747490|ref|YP_001753750.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Methylobacterium
radiotolerans JCM 2831]
gi|170654012|gb|ACB23067.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Methylobacterium
radiotolerans JCM 2831]
Length = 680
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 247/697 (35%), Positives = 380/697 (54%), Gaps = 33/697 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A++TL NPPVNAL + A L + + + V+A+VL G F GG DI F +
Sbjct: 1 MAVLTLANPPVNALGAALRAALDEALTQVIADVSVRAVVLAAEGKVFVGGADIGEFGRPQ 60
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
+PD+ ++ ++ KP+VAA+ G ALGGGLELAM CH R+AAP ++GLP
Sbjct: 61 ---RPPSLPDI-----LDRLDASPKPVVAAIGGAALGGGLELAMACHGRVAAPSARIGLP 112
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 191
E+ LG+IPG TQRLPRL+G A MML + +++E+ LG++DAVV + L+ +R
Sbjct: 113 EIKLGIIPGAGGTQRLPRLIGPDTAFPMMLTGEPVSAEKAAALGIVDAVVLGD-LVAEAR 171
Query: 192 LWALDIA-ARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 250
AL++A A P +R R+DKL EARE + +A K P+ A +
Sbjct: 172 TRALELADAGTLPRVRD--RSDKL--TPEARERFEAQATEAVKRDPDATNVHALARAVRA 227
Query: 251 GIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKVA 309
G+ + V E F+ LV S+ L + FFA+R ++VP + D +P +R A
Sbjct: 228 GLEQDFDAAVAVERAEFRALVEDPRSKALRYAFFAEREAARVPGLPKDTPRRP--IRTAA 285
Query: 310 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 369
VIG G MG GIA I V + E L +G+ ++A G RG +T+ +
Sbjct: 286 VIGAGTMGGGIAMCFANAGIPVTVIETEEGALTRGLDRVKALYAGSAKRGSITEAQREER 345
Query: 370 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 429
+ + G + ++ D+V+EA E + +K+ IFSEL++ P ILATNTS +D+N +
Sbjct: 346 VGRITGAIGLEHAREADIVVEAAFEDMGVKRGIFSELDQIAKPGAILATNTSYLDVNAIA 405
Query: 430 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 489
T+ ++G HFFSPA+VM L+E+VR E+T+ +V+ + +GK + K+PV VG C GF
Sbjct: 406 AVTNRPQDVLGLHFFSPANVMRLVEVVRAEKTAPEVLATALDLGKRLNKLPVAVGVCFGF 465
Query: 490 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDK 549
NR S++ L+ G +D+A+ FG +GPF + DLAG + + K+F
Sbjct: 466 VGNRMLERRSRAGERLLLEGALPHEVDAAVTGFGFRMGPFAMGDLAGLDIGWRSRKDF-- 523
Query: 550 AFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKP-DPSVLPIIEECRRLSNIMP 608
++P+ D L + GR G+ G+G Y Y G++ DP V +I +
Sbjct: 524 -----GGRAPVADSLAEQGRFGQKTGRGFYLYPDGARTGTRDPEVEALIARVAAEHGV-- 576
Query: 609 GGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWA 668
S T IV +++P+VNE R+LEEGI R D+D + G ++P++RGG + WA
Sbjct: 577 --ARRSFTADAIVARLMYPMVNEGARILEEGIAARPGDIDTIWINGYNWPAWRGGPMHWA 634
Query: 669 DAVGANYVYTSLKKWSQLYGNFFK-PSRFLEERATKG 704
D VG + +L +++ G+ + P+ L+ A +G
Sbjct: 635 DTVGLKTIAEALTRFAAETGDDSQEPAPLLKRLAAEG 671
>gi|408417043|ref|YP_006627750.1| bifunctional enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase
[Bordetella pertussis 18323]
gi|401779213|emb|CCJ64709.1| probable enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase,
bifunctional enzyme [Bordetella pertussis 18323]
Length = 705
Score = 365 bits (938), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 241/700 (34%), Positives = 366/700 (52%), Gaps = 37/700 (5%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA++++ NPP+NAL+ + AGL EA + V+A+VL G F G DI F +
Sbjct: 21 VAVLSVDNPPINALSDTVRAGLCSALREAEADPAVRAVVLACEGNTFVAGADIREFTRAK 80
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
GA + +P V IE C+KP+VAA+ G ALGGGLELA+ CH R+A +LGLP
Sbjct: 81 GAAEAIDVPAV--------IESCRKPVVAALHGQALGGGLELALACHGRVALAGCRLGLP 132
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 191
E+TLG+IPG TQRLPRL+GL A E++L +I +E + GL+DAV R
Sbjct: 133 EITLGLIPGGGGTQRLPRLIGLEAAAELILSGATIDAETARESGLLDAVWPDR-----LR 187
Query: 192 LWALDIAARRKPWIRSLHRTDKLG----SLSEAREVLKLARLQAKKTAPNMPQHQACLDV 247
A++ AA + R L S +++ K+A +++ A PQ A
Sbjct: 188 ERAIEFAASLADSPAGVRRASTLAHPPMSPQTGQDLRKIA--ESRPAALRAPQAGAAAVE 245
Query: 248 IEEGIVHGGYS-GVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 306
++ G E ++F L + SR L +FFA+R+ +V + D P
Sbjct: 246 ALSAAAQPDFARGRALERELFARLRDGEESRALRALFFAERSARRV-GLDDATSAPPMAH 304
Query: 307 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 366
AV+G G MG GIA A + V +V L + ++ I A+ R L RG++T+ A
Sbjct: 305 DAAVVGAGTMGRGIAIALADAGLRVRFIDVEQASLDRALEAIRAHYRSLAARGRMTEAAA 364
Query: 367 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 426
+A+ + D + D+V+EA E + +KQ IF +L+ P +LATNTST+D++
Sbjct: 365 RDAVARISPASDMQAAAEADVVVEAAFEDLAIKQAIFRQLDSIVRPGAVLATNTSTLDVD 424
Query: 427 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 486
+ T ++G HFFSPA+VM LLE+VR RT+ + + ++ +G+ + KV V VG C
Sbjct: 425 AIAAATRRPQDVVGTHFFSPANVMRLLEVVRGARTAPRTLGAVLALGRRMGKVCVTVGVC 484
Query: 487 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKE 546
GF NR ++ LL+ G ID A R FG +GP DLAG ++ +
Sbjct: 485 DGFVANRMSAHRARQIELLLQHGALPQDIDQAAREFGFSMGPCAATDLAGLDISWRIRR- 543
Query: 547 FDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSN 605
+ +SP+ D L + GR G+ G+G ++Y GS+ PDP V +I RR++
Sbjct: 544 ------GKGARSPIADALCELGRFGQKVGRGYFSYAPGSRVAVPDPEVEALI---RRMAE 594
Query: 606 IMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIV 665
+ G + S I + ++ PV+NE RVL++G+ +A D+D V G +P+ RGG +
Sbjct: 595 QL-GIRRQSFDLATITDRLILPVINEGARVLQDGVARQARDIDLIWVHGFGWPARRGGPM 653
Query: 666 FWADAVGANYVYTSLKKWSQ-LYGNFFKPSRFLEERATKG 704
A+ VG V L + + L +P+ L + AT+G
Sbjct: 654 LHAERVGLASVCDRLARLADALEDASLQPAPLLRDLATRG 693
>gi|227823146|ref|YP_002827118.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Sinorhizobium fredii NGR234]
gi|227342147|gb|ACP26365.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Sinorhizobium fredii NGR234]
Length = 710
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 252/718 (35%), Positives = 368/718 (51%), Gaps = 56/718 (7%)
Query: 4 PRVTMEVGNDG-VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFS 62
P +T+ + G VA++T+ NPPVNAL+ + GL D E + VKA+VLT G F
Sbjct: 23 PNMTVSIEQIGEVAVVTVDNPPVNALSQAVRQGLLDAVEALDADPFVKAVVLTCAGRTFI 82
Query: 63 GGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHA 122
G D+ F K +PD+ V IE KKP VAA+ G ALGGG E+A+GC
Sbjct: 83 AGADVGEFGKPPTP---PHLPDL-----VARIERAKKPWVAAIHGSALGGGFEVALGCRF 134
Query: 123 RIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDA 179
R+A +GLPE+ LG++PG T RLPRL G+ A++M+ I + + GL+D
Sbjct: 135 RVATASASVGLPEVRLGLVPGAGGTVRLPRLAGVETAVDMVTAGAPIGARTACEAGLVDT 194
Query: 180 VVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMP 239
V+ ++L+ + +A + R P +L S + + + K
Sbjct: 195 VI-EDDLVAGAVTFARTVLDR--PLPDALRDRSVAASSAGFWDAAAGSVAARAKREEAPL 251
Query: 240 QHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIG 299
+ AC+ E + + E + F L + L HVFFA+RA ++ P + G
Sbjct: 252 RALACVRRAAEADFE---TAIAFERETFLALRGSAQAAALRHVFFAERAATRPPELA--G 306
Query: 300 LKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRG 359
+ PR + AVIGGG MG+GIA A + VVL E + + +G+ + A G RG
Sbjct: 307 VIPRTIGSAAVIGGGTMGAGIAAALRDAGLPVVLVERDDGAVERGLANLRAIFDGAAKRG 366
Query: 360 KLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATN 419
+++ D A + + G DY+ D+D+V+EAV E + +K+++F L AC +LATN
Sbjct: 367 RMSADAAAERMAGVIGTTDYAALADIDLVVEAVFEDLDVKREVFRRLAAACRAEAVLATN 426
Query: 420 TSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKV 479
TS +D + E S DR +G HFFSPA VM LLEIV T+ TS VI + +I+ K+
Sbjct: 427 TSYLDPERIAEGISRPDRFLGLHFFSPAQVMKLLEIVPTKATSPDVIAAGFALARILNKI 486
Query: 480 PVVVGNCTGFAVNRAF-FPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYG 538
PV G C GF NR Q+ RLL+S G +D+A+R+FGLP+GPF+ DL G
Sbjct: 487 PVRAGICDGFIGNRILKVTRVQAERLLLS-GATPAAVDAAMRAFGLPMGPFEAQDLGGLD 545
Query: 539 VAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPII 597
+AA K +A ++SF +P+ D L + R G+ +G G Y YE G + P+P V II
Sbjct: 546 IAAFQRKAA-RARGEKSF-APIADRLCAARRFGQKSGGGWYDYEPGDRTPRPSDVVAAII 603
Query: 598 EE-----CRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASV 652
E RR + IV+ IL+P+VNE R+L +G +R SD+D +
Sbjct: 604 AEEAKSWLRR-----------DWHDDSIVDCILWPMVNEGARILADGTALRVSDIDLVKI 652
Query: 653 LGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQ---------------LYGNFFKPSR 695
G FP +RGG + +A A G + V +L + +G F PSR
Sbjct: 653 HGYGFPRWRGGPMHYAQAYGLDKVVDALDALASEGLADPPCDLLIAAARHGGFADPSR 710
>gi|126441399|ref|YP_001057503.1| enoyl-CoA hydratase [Burkholderia pseudomallei 668]
gi|167917354|ref|ZP_02504445.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia pseudomallei BCC215]
gi|237810655|ref|YP_002895106.1| peroxisomal bifunctional enzyme [Burkholderia pseudomallei MSHR346]
gi|254196939|ref|ZP_04903363.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia pseudomallei S13]
gi|418392585|ref|ZP_12968350.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Burkholderia pseudomallei 354a]
gi|418558385|ref|ZP_13122951.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Burkholderia pseudomallei 354e]
gi|126220892|gb|ABN84398.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase family protein [Burkholderia pseudomallei
668]
gi|169653682|gb|EDS86375.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia pseudomallei S13]
gi|237504800|gb|ACQ97118.1| peroxisomal bifunctional enzyme [Burkholderia pseudomallei MSHR346]
gi|385363373|gb|EIF69153.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Burkholderia pseudomallei 354e]
gi|385375227|gb|EIF80015.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Burkholderia pseudomallei 354a]
Length = 708
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 238/697 (34%), Positives = 357/697 (51%), Gaps = 19/697 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D V ++T+ +PPVNAL+ + GL D + A + V A+++ G G F G DI F
Sbjct: 17 RDKVLVVTIDHPPVNALSADVRRGLVDALDAADADAAVGAVLIVGAGRNFIAGADIREFG 76
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K + V N IE KP+V A+ G ALGGGLE+A+ H R+A P +L
Sbjct: 77 KP--------PVPPLLPDVCNRIETSGKPVVVALHGAALGGGLEVALAAHYRLAVPGAKL 128
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
GLPE+ LG++PG TQR PRL+G A+E+ML + ++EE LGL+D + S++ L
Sbjct: 129 GLPEVQLGLLPGAGGTQRTPRLIGAKAALELMLSGRHASAEEALALGLVDRLAHSDDTLA 188
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 248
+ ++ A +R L + A L AR + + + +D +
Sbjct: 189 EGLAYVHELLAA-GAGVRRTRDAQGLADRAAAEAALDAARADVARHSRGLFSPARIVDAV 247
Query: 249 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 308
+ G+ E ++F E + GLVH FFAQR +K P T G PR + ++
Sbjct: 248 AAALAQPFDEGLRTERRLFVECLDSPQRAGLVHAFFAQREAAKSPE-TRRG-APRAIERI 305
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
V+GGG MG+GIA A + V + E + L +G +E GLV +G++T
Sbjct: 306 GVVGGGTMGAGIAVAALDAGFPVTMIERDDASLERGRAHVEKVYAGLVAKGRMTPAAQAA 365
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
L KG Y D+VIEAV E + +K+ +F+EL +AC P +LATNTS +D++ +
Sbjct: 366 RLARFKGGTSYEALAQADVVIEAVFEDMAVKKAVFAELARACKPGAVLATNTSYLDIDEL 425
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
+IG HFFSPA++M LLE+V + SA V+ + + + K+PV G C G
Sbjct: 426 AASVERAPDVIGLHFFSPANIMKLLEVVVPAKVSADVVATAFELARKLGKIPVRAGVCDG 485
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR Y +A ++ G ++ID AIR FG P+GP+Q++DLAG + AT K
Sbjct: 486 FIGNRVLAVYRTAADYMMEDGASPYQIDRAIREFGFPMGPYQVVDLAGGDIGWATRKRRA 545
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIM 607
R + D L + G G+ G+G Y Y G++ PDP V II + R +
Sbjct: 546 PTRDPRLRYVEIGDRLCERGWFGQKTGRGYYLYPDGARVGTPDPEVEAIIAQARAAKGV- 604
Query: 608 PGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFW 667
P + T++EIV L ++NE V+ E I +R D+D + G FP +RGG + +
Sbjct: 605 ---SPRAFTDEEIVRRYLAAMINEGANVVHEKIALRPLDVDAVFLHGYGFPRHRGGPMHY 661
Query: 668 ADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
AD VG V ++ ++ F+KPS L + +G
Sbjct: 662 ADTVGLANVLADIRAFAGEDPVFWKPSPLLVDLVARG 698
>gi|254181976|ref|ZP_04888573.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia pseudomallei 1655]
gi|184212514|gb|EDU09557.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia pseudomallei 1655]
Length = 708
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 238/697 (34%), Positives = 357/697 (51%), Gaps = 19/697 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D V ++T+ +PPVNAL+ + GL D + A + V A+++ G G F G DI F
Sbjct: 17 RDKVLVVTIDHPPVNALSADVRRGLVDALDAADADVAVGAVLIVGAGRNFIAGADIREFG 76
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K + V N IE KP+V A+ G ALGGGLE+A+ H R+A P +L
Sbjct: 77 KP--------PVPPLLPDVCNRIETSGKPVVVALHGAALGGGLEVALAAHYRLAVPGAKL 128
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
GLPE+ LG++PG TQR PRL+G A+E+ML + ++EE LGL+D + S++ L
Sbjct: 129 GLPEVQLGLLPGAGGTQRTPRLIGAKAALELMLSGRHASAEEALALGLVDRLAHSDDTLA 188
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 248
+ ++ A +R L + A L AR + + + +D +
Sbjct: 189 EGLAYVHELLAA-GAGVRRTRDAQGLADRAAAEAALDAARADVARHSRGLFSPARIVDAV 247
Query: 249 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 308
+ G+ E ++F E + GLVH FFAQR +K P T G PR + ++
Sbjct: 248 AAALAQPFDEGLRTERRLFVECLDSPQRAGLVHAFFAQREAAKSPE-TRRG-APRAIERI 305
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
V+GGG MG+GIA A + V + E + L +G +E GLV +G++T
Sbjct: 306 GVVGGGTMGAGIAVAALDAGFPVTMIERDDASLERGRAHVEKVYAGLVAKGRMTPAAQAA 365
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
L KG Y D+VIEAV E + +K+ +F+EL +AC P +LATNTS +D++ +
Sbjct: 366 RLARFKGGTSYEALAQADVVIEAVFEDMAVKKAVFAELARACKPGAVLATNTSYLDIDEL 425
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
+IG HFFSPA++M LLE+V + SA V+ + + + K+PV G C G
Sbjct: 426 AASVERAPDVIGLHFFSPANIMKLLEVVVPAKVSADVVATAFELARKLGKIPVRAGVCDG 485
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR Y +A ++ G ++ID AIR FG P+GP+Q++DLAG + AT K
Sbjct: 486 FIGNRVLAVYRTAADYMMEDGASPYQIDRAIREFGFPMGPYQVVDLAGGDIGWATRKRRA 545
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIM 607
R + D L + G G+ G+G Y Y G++ PDP V II + R +
Sbjct: 546 PTRDPRLRYVEIGDRLCERGWFGQKTGRGYYLYPDGARVGTPDPEVEAIIAQARAAKGV- 604
Query: 608 PGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFW 667
P + T++EIV L ++NE V+ E I +R D+D + G FP +RGG + +
Sbjct: 605 ---SPRAFTDEEIVRRYLAAMINEGANVVHEKIALRPLDVDAVFLHGYGFPRHRGGPMHY 661
Query: 668 ADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
AD VG V ++ ++ F+KPS L + +G
Sbjct: 662 ADTVGLANVLADIRAFAGEDPVFWKPSPLLVDLVARG 698
>gi|323454080|gb|EGB09950.1| hypothetical protein AURANDRAFT_22720 [Aureococcus anophagefferens]
Length = 695
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 246/712 (34%), Positives = 367/712 (51%), Gaps = 50/712 (7%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
+GVA++ + +PPVNAL + AGL E A + D +V+ G+G F G DI F
Sbjct: 10 NGVAVLHVTSPPVNALGAAVRAGLVSSMERALA-DSATGLVVVGDGLTFPAGADITEF-- 66
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
G + P S V+ ED P AA+ G ALGGG ELAM CH R+ A ++G
Sbjct: 67 ----GKPPMEP--SFGEVMRAFEDADIPTAAAIHGTALGGGFELAMSCHYRVMASCARVG 120
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 189
LPE+ LG++PG TQRLPRLVG A E+M+ + ++++E LG +DAVV +L
Sbjct: 121 LPEVHLGILPGAGGTQRLPRLVGADAAAEIMVTGRQVSAKEALALGAVDAVVAKADL--- 177
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
+ A + + RT K + ++ +A+L+A+ T N P+ + + +E
Sbjct: 178 ------EAEAVKVVEASPVRRT-KAVLVDGFKDADSIAKLKARATL-NAPK--SIIQCVE 227
Query: 250 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRG---VR 306
+ + G+ E F+EL + L H+FFA+RA SKVP G+ P V+
Sbjct: 228 AAVCNDMQDGLAFEEARFRELQGSTQANALQHLFFAERACSKVP-----GVSPEDAVDVQ 282
Query: 307 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVR--GLVTRGKLTQD 364
V+GGG MG GIA + N + V + E +++ I +E R RG+LT++
Sbjct: 283 AAGVVGGGTMGRGIAMCFVDNGLPVTILETSADAAAAAISGVEETYRRSSAFKRGRLTEE 342
Query: 365 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 424
L +L D KD D+V+EAV E + +K+ IF++L++ P C+LA+NTST+
Sbjct: 343 ALTAKLNLLSSASDVDALKDCDLVVEAVFEDMAVKRSIFADLDRVTKPSCVLASNTSTLS 402
Query: 425 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 484
++ + + R++G HFFSPA+VM LLE VR RT + M +GK ++K V+ G
Sbjct: 403 IDGIAGAVADPARVVGMHFFSPANVMRLLENVRGARTGPAAVATAMAMGKRLRKTTVLAG 462
Query: 485 NCTGFAVNRAFFPYSQSA-RLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG--YGVAA 541
+ GF NR PY + LL +D+A+ +G+ +G FQ+ DLAG G A
Sbjct: 463 DDFGFIGNRMLEPYGRECLALLRHANCGPELVDAALLEYGMAMGFFQMSDLAGNDIGYAV 522
Query: 542 ATSKEFDKAF---PDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIE 598
TS A P + + + D L ++GR G+ G+G Y YE P DP+V +I
Sbjct: 523 RTSLGLTDAASRDPAVEYSADVADALARAGRFGQKVGRGWYAYETPRVPSSDPAVAELIA 582
Query: 599 ECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFP 658
+ S + P VT ++V+ L + NE RVLEEG+ +R SD+D G FP
Sbjct: 583 GFKDAS-LAP-----DVTHGDVVDRALLALANEGFRVLEEGLALRPSDIDVVWTSGYGFP 636
Query: 659 SYRGGIVFW-ADAVGANYVYTSLKKWSQLYGN--FFKPSRFLEERATKGIPL 707
+RGG + W AD VG V +L + + KP+R L + A G L
Sbjct: 637 RHRGGPMQWAADDVGLAEVKATLDALHAARPDVPYLKPARLLADMADAGAKL 688
>gi|254187905|ref|ZP_04894417.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia pseudomallei Pasteur 52237]
gi|157935585|gb|EDO91255.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia pseudomallei Pasteur 52237]
Length = 708
Score = 363 bits (933), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 238/697 (34%), Positives = 357/697 (51%), Gaps = 19/697 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D V ++T+ +PPVNAL+ + GL D + A + V A+++ G G F G DI F
Sbjct: 17 RDKVLVVTIDHPPVNALSADVRRGLVDALDAADADAAVGAVLIVGAGRNFIAGADIREFG 76
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K + V N IE KP+V A+ G ALGGGLE+A+ H R+A P +L
Sbjct: 77 KP--------PVPPLLPDVCNRIETSGKPVVVALHGAALGGGLEVALAAHYRLAVPGAKL 128
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
GLPE+ LG++PG TQR PRL+G A+E+ML + ++EE LGL+D + S++ L
Sbjct: 129 GLPEVQLGLLPGAGGTQRTPRLIGAKAALELMLSGRHASAEEALALGLVDRLAHSDDTLA 188
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 248
+ ++ A +R L + A L AR + + + +D +
Sbjct: 189 EGLAYVHELLAA-GAGVRRTRDAQGLADRAAAEAALDAARADVARHSRGLFSPARIVDAV 247
Query: 249 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 308
+ G+ E ++F E + GLVH FFAQR +K P T G PR + ++
Sbjct: 248 AAALAQPFDEGLRTERRLFVECLDSPQRAGLVHAFFAQREAAKSPE-TRRG-APRAIERI 305
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
V+GGG MG+GIA A + V + E + L +G +E GLV +G++T
Sbjct: 306 GVVGGGTMGAGIAVAALDAGFPVTMIERDDASLERGRAHVEKVYAGLVAKGRMTPAAQAA 365
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
L KG Y D+VIEAV E + +K+ +F+EL +AC P +LATNTS +D++ +
Sbjct: 366 RLARFKGGTSYEALAQADVVIEAVFEDMAVKKAVFAELARACKPGAVLATNTSYLDIDEL 425
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
+IG HFFSPA++M LLE+V + SA V+ + + + K+PV G C G
Sbjct: 426 AASVERAPDVIGLHFFSPANIMKLLEVVVPAKVSADVVATAFELARKLGKIPVRAGVCDG 485
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR Y +A ++ G ++ID AIR FG P+GP+Q++DLAG + AT K
Sbjct: 486 FIGNRVLAVYRTAADYMMEDGASPYQIDRAIREFGFPMGPYQVVDLAGGDIGWATRKRRA 545
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIM 607
R + D L + G G+ G+G Y Y G++ PDP V II + R +
Sbjct: 546 PTRDPRLRYVEIGDRLCERGWFGQKTGRGYYLYPDGARVGTPDPEVEAIIAQARAAKGV- 604
Query: 608 PGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFW 667
P + T++EIV L ++NE V+ E I +R D+D + G FP +RGG + +
Sbjct: 605 ---SPRAFTDEEIVRRYLAAMINEGANVVHEKIALRPLDVDAVFLHGYGFPRHRGGPMHY 661
Query: 668 ADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
AD VG V ++ ++ F+KPS L + +G
Sbjct: 662 ADTVGLANVLADIRAFAGEDPVFWKPSPLLVDLVARG 698
>gi|393767275|ref|ZP_10355824.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Methylobacterium sp.
GXF4]
gi|392727176|gb|EIZ84492.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Methylobacterium sp.
GXF4]
Length = 690
Score = 363 bits (933), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 252/701 (35%), Positives = 382/701 (54%), Gaps = 34/701 (4%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+ GVA++TL NPPVNAL + A L A + + V+AIVL G F GG DI+ F
Sbjct: 7 DGGVAVLTLANPPVNALGAALRAALDGALARAEADEAVRAIVLAAEGKVFVGGADISEFG 66
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K A +PDV + ++ +KP+VAA+ G ALGGGLELAM CH R+AAP +L
Sbjct: 67 KPPQA---PSLPDV-----LERLDAGRKPVVAAIGGAALGGGLELAMACHGRVAAPAAKL 118
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
GLPE+ LG+IPG TQRLPRL+G A MML + +++E KLG++DAVV + L+
Sbjct: 119 GLPEIKLGIIPGAGGTQRLPRLIGPDAAFTMMLTGEPVSAEIAAKLGIVDAVVLGD-LVP 177
Query: 189 VSRLWALDIAARRK-PWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDV 247
+R+ AL++A P +R R D L EAR+ + A K P A
Sbjct: 178 AARIRALELADSGALPRVRD--RVDTL--TPEARQAFEAKAEAAVKRDPEATNVHALARA 233
Query: 248 IEEGIVHGGY-SGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT-DIGLKPRGV 305
+ G+ + + V E F+ LV S+ L + FFA+R ++VP ++ D +P V
Sbjct: 234 VRAGLDPDAFDAAVAVERAEFRTLVEDPRSKALRYAFFAEREAARVPGLSKDTPRRP--V 291
Query: 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDK 365
AVIG G MG GIA I V + E + L +G+ ++ G RG +T+ +
Sbjct: 292 ETAAVIGAGTMGGGIAMCFANAGIPVTVIETEAGALERGLDRVKGLYAGSAKRGSITEAQ 351
Query: 366 ANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL 425
+ + + G + + D+VIEA E + +K++IFS+L+ P ILATNTS +D+
Sbjct: 352 RDERIGRITGAIGLENAGEADIVIEAAFEDMAVKREIFSKLDGIAKPGAILATNTSYLDV 411
Query: 426 NIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 485
+ + T ++G HFFSPA+VM L+E+VR +T+ V+ + + K + K+PV VG
Sbjct: 412 DAIAAVTGRPQDVLGLHFFSPANVMRLVEVVRASKTAPDVLATALHLAKRLNKLPVTVGV 471
Query: 486 CTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSK 545
C GF NR S++A L+ G +D+A+ FG +GPF + DLAG + + K
Sbjct: 472 CFGFVGNRILERRSRAAERLLLEGALPHAVDAAVTGFGFRMGPFAMSDLAGLDIGWRSRK 531
Query: 546 EFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKP-DPSVLPIIEECRRLS 604
+F ++P+ D L + GR G+ G+G + Y G++ DP V +IE+
Sbjct: 532 DF-------GGRAPVADALAEMGRFGQKTGRGFFVYSDGARTGTRDPKVEALIEKTAAEH 584
Query: 605 NIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGI 664
I S T EI+ +++P+VNE R+LEEGI R D+D + G ++P++RGG
Sbjct: 585 GIA----RRSFTPDEIIARLMYPMVNEGARILEEGIAARPGDIDTIWINGYNWPAWRGGP 640
Query: 665 VFWADAVGANYVYTSLKKWSQLYGNFFK-PSRFLEERATKG 704
+ WAD VG +V +L ++++ G+ + P+ L + A G
Sbjct: 641 MHWADTVGLKHVAEALTRFARETGDDSQEPAPLLRKLAESG 681
>gi|76810920|ref|YP_332048.1| enoyl-CoA hydratase [Burkholderia pseudomallei 1710b]
gi|254258381|ref|ZP_04949435.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase family protein [Burkholderia pseudomallei
1710a]
gi|76580373|gb|ABA49848.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Burkholderia pseudomallei 1710b]
gi|254217070|gb|EET06454.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase family protein [Burkholderia pseudomallei
1710a]
Length = 708
Score = 363 bits (933), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 238/697 (34%), Positives = 357/697 (51%), Gaps = 19/697 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D V ++T+ +PPVNAL+ + GL D + A + V A+++ G G F G DI F
Sbjct: 17 RDKVLVVTIDHPPVNALSADVRRGLVDALDAADADAAVGAVLIVGAGRNFIAGADIREFG 76
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K + V N IE KP+V A+ G ALGGGLE+A+ H R+A P +L
Sbjct: 77 KP--------PVPPLLPDVCNRIETSGKPVVVALHGAALGGGLEVALAAHYRLAVPGAKL 128
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
GLPE+ LG++PG TQR PRL+G A+E+ML + ++EE LGL+D + S++ L
Sbjct: 129 GLPEVQLGLLPGAGGTQRTPRLIGAKAALELMLSGRHASAEEALALGLVDRLAHSDDTLA 188
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 248
+ ++ A +R L + A L AR + + + +D +
Sbjct: 189 EGLAYVHELLAA-GAGVRRTRDAQGLADRAAAEAALDAARADVARHSRGLFSPARIVDAV 247
Query: 249 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 308
+ G+ E ++F E + GLVH FFAQR +K P T G PR + ++
Sbjct: 248 AAALAQPFDEGLRTERRLFVECLDSPQRAGLVHAFFAQREAAKSPE-TRRG-APRAIERI 305
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
V+GGG MG+GIA A + V + E + L +G +E GLV +G++T
Sbjct: 306 GVVGGGTMGAGIAVAALDAGFPVTMIERDDASLERGRAHVEKVYAGLVAKGRMTPAAQAA 365
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
L KG Y D+VIEAV E + +K+ +F+EL +AC P +LATNTS +D++ +
Sbjct: 366 RLARFKGGTSYEALAQADVVIEAVFEDMAVKKAVFAELARACKPGAVLATNTSYLDIDEL 425
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
+IG HFFSPA++M LLE+V + SA V+ + + + K+PV G C G
Sbjct: 426 AASVERAPDVIGLHFFSPANIMKLLEVVVPAKVSADVVATAFELARKLGKIPVRAGVCDG 485
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR Y +A ++ G ++ID AIR FG P+GP+Q++DLAG + AT K
Sbjct: 486 FIGNRVLAVYRTAADYMMEDGASPYQIDRAIREFGFPMGPYQVVDLAGGDIGWATRKRRA 545
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIM 607
R + D L + G G+ G+G Y Y G++ PDP V II + R +
Sbjct: 546 PTRDPRLRYVEIGDRLCERGWFGQKTGRGYYLYPDGARVGTPDPEVEAIIAQARAAKGV- 604
Query: 608 PGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFW 667
P + T++EIV L ++NE V+ E I +R D+D + G FP +RGG + +
Sbjct: 605 ---SPRAFTDEEIVRRYLAAMINEGANVVHEKIALRPLDVDAVFLHGYGFPRHRGGPMHY 661
Query: 668 ADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
AD VG V ++ ++ F+KPS L + +G
Sbjct: 662 ADTVGLANVLADIRAFAGEDPVFWKPSPLLVDLVARG 698
>gi|432486149|ref|ZP_19728064.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE212]
gi|433174264|ref|ZP_20358789.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE232]
gi|431015358|gb|ELD28913.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE212]
gi|431692008|gb|ELJ57453.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE232]
Length = 714
Score = 363 bits (932), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 236/716 (32%), Positives = 372/716 (51%), Gaps = 39/716 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAIITIDVPDEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPGSD 302
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEANVRGL 355
P + V ++GGGLMG+GIA + V +K++N + + +K + G
Sbjct: 303 ---APPAPLNSVGILGGGLMGAGIAYVTACKAGLPVRIKDINPQGINHALKYSWDQLEGK 359
Query: 356 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCI 415
V R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 360 VRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTI 419
Query: 416 LATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKI 475
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 420 FASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKK 479
Query: 476 IKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLA 535
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD
Sbjct: 480 QGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEV 539
Query: 536 GYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--D 590
G + A+ +R F +P +V +L R G+ NG+G Y Y +KG K K D
Sbjct: 540 GIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVD 598
Query: 591 PSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLD 648
P++ P+I + RLS ++ E + ++NE+ R ++E ++ D D
Sbjct: 599 PAIYPLIGAQGQARLS------------APQVAERCVMLMLNEAVRCVDEQVIRSVRDGD 646
Query: 649 DASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 647 IGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>gi|337265631|ref|YP_004609686.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Mesorhizobium
opportunistum WSM2075]
gi|336025941|gb|AEH85592.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Mesorhizobium
opportunistum WSM2075]
Length = 690
Score = 363 bits (932), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 254/700 (36%), Positives = 359/700 (51%), Gaps = 34/700 (4%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDD--VKAIVLTGNGGRFSGGFDINV 69
++ VA++T+ NPPVNAL+ + L RDD V AI++ G F G DI
Sbjct: 10 DNDVAVVTIDNPPVNALSFHVREPLMQAL--VALRDDASVAAIIIACAGRTFVAGADITE 67
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKT 129
F K M + +V ++E KP VAA+ G ALGGGLELA+GCH R+A
Sbjct: 68 FGKP--------MQPPELRAIVAMLETIAKPTVAAIHGTALGGGLELALGCHFRVADAHA 119
Query: 130 QLGLPEL---TLGVIPGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL 186
+LGLPE+ L GT RLPRLVG KA++M++ I +EE GL+DAV + L
Sbjct: 120 KLGLPEVKLGLLPGGGGTVRLPRLVGAVKALKMIVSGTPIGAEEAHAAGLVDAVFEGD-L 178
Query: 187 LKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLD 246
+ +A ++A + P+ R D+L A + A L K P AC
Sbjct: 179 STHAVNFARELAPKGGPFTPVRDRDDRLKETDLAAFDAEAADLARKARGLEAPI--ACAQ 236
Query: 247 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 306
+ + + E +F L+ D SR H+FFA+R +KVP R +
Sbjct: 237 AVRNAVTLPFDEALAAERALFAGLIASDQSRAQRHLFFAEREAAKVPGKD---TPKRRIA 293
Query: 307 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 366
+V VIG G MG GIA A V L E + E L +G+ TIE N V+RG LT+D
Sbjct: 294 RVGVIGAGTMGGGIAMAFANGGFSVTLLETSEEALQRGLATIEKNYAVSVSRGSLTEDAK 353
Query: 367 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 426
L KG DY++ D D+++EAV E + +K+++F +++ P ILATNTS +D++
Sbjct: 354 RQRLAQFKGSTDYADLADCDLIVEAVFEDMAVKKEVFGKIDAVARPGAILATNTSYLDID 413
Query: 427 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 486
+ S ++G HFFSPA+VM LLEIVR ++T+ + ++ + + I KV VVVG C
Sbjct: 414 EIAASVSRPQDVVGLHFFSPANVMKLLEIVRADKTAPDALATVVDLARRIGKVAVVVGVC 473
Query: 487 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKE 546
GF NR + L+ G +ID A FG P+GPFQ+ DLAG + K
Sbjct: 474 HGFVGNRMLAARGSESEELLLEGATPSQIDKAFTDFGWPMGPFQMGDLAGLDIGWRNRKA 533
Query: 547 FDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVLPIIEECRRLSN 605
R + + D L + GR G+ G+G Y YE G++ PDP V +I R
Sbjct: 534 -------RGQTAVIADTLCEQGRFGQKTGRGFYLYEAGARSGIPDPEVEALI----RDKA 582
Query: 606 IMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIV 665
G P ++ EI+E L+P+VNE ++LEEGI RASD+D V G FP +GG +
Sbjct: 583 AERGIAPRAIGADEIIERTLYPLVNEGAKILEEGIAARASDIDVVWVNGYGFPIGKGGPM 642
Query: 666 FWADAVGANYVYTSLKKWSQLYG-NFFKPSRFLEERATKG 704
FWA + L+ W Q G + FKP+ L+ A G
Sbjct: 643 FWAGLERPARIVERLEYWRQRTGKDVFKPAPRLKAMAETG 682
>gi|288960821|ref|YP_003451161.1| 3-hydroxyacyl-CoA dehydrogenase [Azospirillum sp. B510]
gi|288913129|dbj|BAI74617.1| 3-hydroxyacyl-CoA dehydrogenase [Azospirillum sp. B510]
Length = 728
Score = 363 bits (932), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 247/712 (34%), Positives = 378/712 (53%), Gaps = 38/712 (5%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
N+GVA+ITL +PPVNALA+ + L A V+AIVL G G F GG DI F
Sbjct: 20 NEGVAVITLDHPPVNALALALRTRLGAALHAALRDVSVRAIVLAGAGRGFCGGGDITEFD 79
Query: 72 KVHGAGDVSLMPDVSVE----LVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP 127
+P V E + +LIE+ KP+VAA+ G+ALGGGLELA+ CHAR+A
Sbjct: 80 ----------LPAVCQEPTPATLFSLIENSPKPVVAALHGMALGGGLELALACHARVAEA 129
Query: 128 KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS- 183
+TQ+GLPE+ LG++PG TQRLPRLVG A+ +++ ++ ++ GL D +
Sbjct: 130 RTQVGLPEVHLGLVPGAGGTQRLPRLVGFELALNLIVQGRTQPAQSLRDSGLFDRLTDGS 189
Query: 184 --EELLKVSRLWALDIAARRKPWIRSLHRTDKLG-SLSEAREVLKLARLQAKKTAPNMPQ 240
E ++V+ A ++A L RT L L+ A+ AR + +P
Sbjct: 190 PVEAAVEVAMALAGELAVPNAA-DGMLRRTGALTPRLANAQAFFAFARATVQSRFRGLPA 248
Query: 241 HQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGL 300
AC+D +E+ + G+ E F L GL H F A+R + + + D G+
Sbjct: 249 PVACVDCVEKAATLPFHEGLAFEHDCFTRLRGTAEFAGLRHAFLAERRAADIRGLPD-GI 307
Query: 301 KPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGK 360
KPR V+ VAVIG G MG GIA + + V L E E L +G+ I + +G+
Sbjct: 308 KPRPVKTVAVIGAGTMGGGIAMSLANAGLAVTLIEREQEALDRGLAIIRQTCESALRKGR 367
Query: 361 LTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 420
LT ++A L ++KG + Y + D+VIEAV E + +K+++F +++ +LATNT
Sbjct: 368 LTAEEAAGRLDLIKGCVGYDPVRQADLVIEAVFEDLEVKRQVFEQIDAVARAGTVLATNT 427
Query: 421 STIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVP 480
S +DL+ + T ++G HFFSPAHVM LLE+VR T+ V+ + + + I K
Sbjct: 428 SMLDLDRIAGFTRRPQDVLGLHFFSPAHVMKLLEVVRGAATAPDVLATAIALARRIGKTS 487
Query: 481 VVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVA 540
VV G C GF NR PY A L+ G ++D AI +G+ +GPF++ DLAG +
Sbjct: 488 VVSGVCEGFIGNRILQPYLYQAGRLLDEGALPHQVDQAIERWGMAMGPFRVSDLAGNDLG 547
Query: 541 AATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSV---LPII 597
A + P+ +F D ++ GR G+ +G+G Y Y S+ P PS+ ++
Sbjct: 548 AGIRAQVMANRPELAFSGSF-DAVVAMGRFGQKSGRGWYDY-SASQRGPQPSMEVNAAVV 605
Query: 598 EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSF 657
E RL G + ++ ++EI++ +L +VNE +VL +GI RASD+D G F
Sbjct: 606 AESGRL-----GLRRRTIADEEIIDRLLLALVNEGAKVLGDGIAQRASDIDVVYTAGYGF 660
Query: 658 PSYRGGIVFWADAVGANYVYTSLKKWSQLY-----GNFFKPSRFLEERATKG 704
P +RGG +F AD G + +++++++ +F++P+ L A +G
Sbjct: 661 PRWRGGPMFAADRRGLADILGTMRRFAEAAPDPQDASFWQPAPLLRRLADRG 712
>gi|186471950|ref|YP_001863268.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia phymatum STM815]
gi|184198259|gb|ACC76222.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia phymatum
STM815]
Length = 706
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 232/692 (33%), Positives = 355/692 (51%), Gaps = 19/692 (2%)
Query: 17 IITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGA 76
++T+ NPPVNAL + + GL E A + KA+++ G G F G DI F K
Sbjct: 20 LVTVDNPPVNALGVEVRRGLVAAIEAAEAYAVAKAVLIVGAGRNFIAGADIREFGK---P 76
Query: 77 GDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPEL 136
+ +PDV N IE C KP++ A+ G ALGGGLE+A+ H R+A +LGLPE+
Sbjct: 77 PQMPTLPDV-----CNRIEACSKPVIVAIHGAALGGGLEIALAAHYRLAVAGAKLGLPEV 131
Query: 137 TLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLW 193
LG++PG TQR PRL+G A+ +ML K I +++ K+GL+D V S+++L +
Sbjct: 132 LLGLLPGAGGTQRAPRLIGAEAALSLMLSGKHIGAQDALKMGLVDRVGQSDDVLTEGLTY 191
Query: 194 ALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIV 253
A + + P +R L + +AR K + + +D + +
Sbjct: 192 AQQLLSEHAP-VRRTRDAQGLADTDAGAAAIAVARADTAKKSRGLLSPLKIVDCVNAALT 250
Query: 254 HGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGG 313
G+ E F E + LVH F A+R K P +PR + V+GG
Sbjct: 251 LPFEDGLRFERARFIECLDSPQRAALVHAFQAERQVQKAPETRSA--QPRPIASAGVVGG 308
Query: 314 GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKML 373
G MG+GIA A + + V + E + L +G ++ GL+ +G+LT D L
Sbjct: 309 GTMGAGIAVALLDAGLPVTMIERDDASLARGRAHVDKVYDGLIAKGRLTHDAKAKKLARF 368
Query: 374 KGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTS 433
G Y + D+VIEAV E + +KQ +F+EL++ C P +LATNTS +D++ + +
Sbjct: 369 AGSTSYDALAEADVVIEAVFEDMAVKQAVFAELDRVCKPGAVLATNTSYLDIDAIAAGIA 428
Query: 434 SQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNR 493
+IG HFFSPAHVM LLE+V R SA V+ + K ++KVPV G C GF NR
Sbjct: 429 RPQDVIGLHFFSPAHVMKLLEVVVPARVSADVVATAFDLAKKLRKVPVRAGVCDGFIGNR 488
Query: 494 AFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPD 553
Y +A L+ G ++ID A+R G P+GP+Q++DLAG + AT K
Sbjct: 489 MLAVYRAAADHLMEEGASPYQIDKAVRELGFPMGPYQVIDLAGGDIGWATRKRRASTRDP 548
Query: 554 RSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKP-KPDPSVLPIIEECRRLSNIMPGGKP 612
+ + D L + G G+ +G Y YE G + PDP V II+ R + I P
Sbjct: 549 NARYVQIPDRLCERGWFGQKTSRGFYRYEAGQRAGTPDPEVEAIIDAERERAGITPR--- 605
Query: 613 ISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVG 672
+ ++++IV + ++NE V+ E I +R D+D + G FP++RGG + +AD +G
Sbjct: 606 -AFSDEQIVRRYMAAMINEGANVIHERIALRPLDVDVTLMNGFGFPAWRGGPMHYADTIG 664
Query: 673 ANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+ ++++ + F+KPS L E +G
Sbjct: 665 LPALLADIREFEKRDPLFWKPSPLLVELVERG 696
>gi|157161829|ref|YP_001459147.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli HS]
gi|432671414|ref|ZP_19906943.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE119]
gi|166972669|sp|A8A2L0.1|FADJ_ECOHS RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|157067509|gb|ABV06764.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli HS]
gi|431210333|gb|ELF08395.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE119]
Length = 714
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 236/716 (32%), Positives = 372/716 (51%), Gaps = 39/716 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAIITIDVPDEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPGSD 302
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEANVRGL 355
P + V ++GGGLMG+GIA + V +K++N + + +K + G
Sbjct: 303 ---APPAPLNSVGILGGGLMGAGIAYVTACKAGLPVRIKDINPQGINHALKYSWDQLEGK 359
Query: 356 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCI 415
V R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 360 VRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTI 419
Query: 416 LATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKI 475
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 420 FASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKK 479
Query: 476 IKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLA 535
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD
Sbjct: 480 QGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEV 539
Query: 536 GYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--D 590
G + A+ +R F +P +V +L R G+ NG+G Y Y +KG K K D
Sbjct: 540 GIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVD 598
Query: 591 PSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLD 648
P++ P+I + RLS ++ E + ++NE+ R ++E ++ D D
Sbjct: 599 PAIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCVDEQVIRSVRDGD 646
Query: 649 DASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 647 IGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>gi|334344251|ref|YP_004552803.1| 3-hydroxybutyryl-CoA epimerase [Sphingobium chlorophenolicum L-1]
gi|334100873|gb|AEG48297.1| 3-hydroxybutyryl-CoA epimerase [Sphingobium chlorophenolicum L-1]
Length = 690
Score = 363 bits (931), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 237/707 (33%), Positives = 365/707 (51%), Gaps = 37/707 (5%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
VT EV +A+IT +PPVNAL+ + G+ + A V A+VL G F G
Sbjct: 7 VTYEV-EGPIAVITAHSPPVNALSSAVRQGIAGAVQTALGDGSVGAMVLICEGRTFFAGA 65
Query: 66 DINVFQKVHGAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
DI F K P V L + ++E+ KP++AA+ G ALGGGLELA+ H R
Sbjct: 66 DITEFGK----------PPVEPTLRNLQLIVENATKPVIAAIHGTALGGGLELALVAHYR 115
Query: 124 IAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAV 180
IA P + GLPE+ LG++PG TQRLPR+VG+ KA+++ + + ++GL+D +
Sbjct: 116 IAVPSAKCGLPEVKLGLLPGAGGTQRLPRIVGIEKALDLTTSGAPVGARAAKEMGLVDEL 175
Query: 181 VTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVL-KLARLQAKK-TAPNM 238
+ L + +A + ++P ++ RT+KL E+ + A+K
Sbjct: 176 AQGD-LRADAIAFARRVLEEKRPLLKVRDRTEKLDEARGKPEIFANFRKANARKFRGFKA 234
Query: 239 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT-D 297
P+H + +E + G++ E ++F EL S HVFFA+R +KV + D
Sbjct: 235 PEH--IIRCVEATLEKSFDEGMVYERQLFNELQSDSQSAAQRHVFFAERQAAKVLGLAAD 292
Query: 298 IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 357
P + KV VIG G MG GIA I V + E E L +G+ I N
Sbjct: 293 TPTLP--IAKVGVIGAGTMGGGIAMNFANAGIPVTIVEAKQEALDRGLGIIRGNYESTAK 350
Query: 358 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 417
+G++ + + + +L G + + D D++IEAV E++ +K+++F L+ P ILA
Sbjct: 351 KGRMKAEDVDTRMGLLTGSVAMEDLADCDLIIEAVFENLDVKREVFGTLDAIARPGAILA 410
Query: 418 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 477
TNTS +D++ + T + + G HFFSPA+VM LLE+VRT+ TS ++++ M + K I
Sbjct: 411 TNTSYLDIDDIAAATERPESVCGLHFFSPANVMKLLEVVRTKDTSPEIVVTAMKLAKTIG 470
Query: 478 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGY 537
K+ V+VGN GF NR + A LV G + +D + FG +G FQ+ DL G
Sbjct: 471 KIGVLVGNGFGFVGNRILAARNAQADRLVLEGATPWTVDRVLYDFGFAMGHFQMRDLVGL 530
Query: 538 GVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPII 597
V +++ + + + + ++L + GR+G+ G Y Y+ K P P + +I
Sbjct: 531 DVG------WNR---ETTSSANVREILNEMGRHGQKTKGGYYDYDDNRKQTPSPIAMQVI 581
Query: 598 EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSF 657
E+ I + +V++ EI + ILF +VNE R+L+EGI RASD+D V G +
Sbjct: 582 EDFAAKQGI----ERRAVSDDEIHDRILFAMVNEGARILDEGIAARASDIDIVWVTGYGW 637
Query: 658 PSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
P YRGG +FW D G V LK +G F PS +E A +G
Sbjct: 638 PKYRGGPMFWGDLQGLPTVLEKLKTLEAAHGEAFTPSPLIERLAAEG 684
>gi|262196642|ref|YP_003267851.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase protein [Haliangium
ochraceum DSM 14365]
gi|262079989|gb|ACY15958.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Haliangium
ochraceum DSM 14365]
Length = 752
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 252/743 (33%), Positives = 379/743 (51%), Gaps = 59/743 (7%)
Query: 3 APRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKA-IVLTGNGG 59
A V++ VG+DGVA++T+ P PVN L ++A + V+A ++++G
Sbjct: 6 AKSVSIRVGDDGVAVVTIDVPGQPVNTLRSELIAEFDAALSALEGDEQVRAAVIVSGKER 65
Query: 60 RFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMG 119
F G DI +++ A D + + E L + P+VAA+ G LGGGLELA+
Sbjct: 66 GFVAGADIKELERIETAADGEAVSRSAQERFARLA-GFRVPVVAAIHGDCLGGGLELALA 124
Query: 120 CHARIA--APKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKL 174
CH R+A A +T LGLPE+ LG++PG TQRLPRL+GL A++M+L K + +++ L
Sbjct: 125 CHGRVASDADETSLGLPEVQLGLLPGAGGTQRLPRLIGLQAALDMILTGKRLRAKKARAL 184
Query: 175 GLIDAVVTSEELLKVSRLWALDIA----------------ARRKPWIRSLHRTDKL-GSL 217
GL+D VV + L + +R AL +A +R +R R L G L
Sbjct: 185 GLVDLVVPAAVLERAARQHALQLAEARAALRKQRAGKGALSRMAATMREAVRGVNLSGDL 244
Query: 218 SEAREVLKLARLQAK------------KTAPNMPQHQACLDVIEEGIV--HGGYSGVLKE 263
E VL+ RL K KT N P + L+ + G GY+ E
Sbjct: 245 QEL--VLEDNRLGRKVVFDTARKKLLAKTQGNYPAPEKALEAMRLGAAKPEDGYAA---E 299
Query: 264 AKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGL--KPRGVRKVAVIGGGLMGSGIA 321
A+ F EL + + L+ +F A A K V+ G +PR VRKVA++G GLMG+GIA
Sbjct: 300 ARFFGELAVSPEANELIQIFLATTALKKDSGVSGQGAEARPRPVRKVAMLGAGLMGAGIA 359
Query: 322 TAHILN-NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS 380
V LK+ + + +G++ + V G + R +L+ + + + DYS
Sbjct: 360 YVSAAKAGAQVRLKDRDPASVGRGLRAVREIVDGQLKRKRLSARQRLELMNRVTPTTDYS 419
Query: 381 EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIG 440
F D D++IEAV E + LK++I +E+E AC P I A+NTSTI + + E ++ + +IG
Sbjct: 420 GFGDADVIIEAVFEDLALKRRIVAEVEAACGPETIFASNTSTIPIGRIAEASTRPETVIG 479
Query: 441 AHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQ 500
H+FSP MPLLEI+ TE+T+ V + +GK K +VV + GF +R PY
Sbjct: 480 MHYFSPVDKMPLLEIIVTEQTAPWVTATCVALGKAQGKTVIVVRDSVGFYTSRILGPYMN 539
Query: 501 SARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPL 560
A +++ GV V RID A+ FG P+GP +LLD G VA +AF +R P
Sbjct: 540 EAFHILAEGVSVERIDRALVDFGFPVGPVKLLDEVGVDVAHKAGTVMREAFGERMDAPPG 599
Query: 561 VDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEI 620
++ L+ R G+ N +G Y Y G K D SV ++ + PG + EI
Sbjct: 600 MERLIDDERLGRKNQRGFYLY-GGKKKGVDDSVYELL-------GVAPGRE---TAADEI 648
Query: 621 VEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSL 680
E +VNE+ EG++ A D D ++ G+ FP +RGG + + DA+GA V L
Sbjct: 649 AERCALQMVNEAAHCFGEGVLRSARDGDIGAIFGLGFPPFRGGPLRYVDALGAGVVVERL 708
Query: 681 KKWSQLYGNFFKPSRFLEERATK 703
+ + +G F+P+ L A K
Sbjct: 709 RALAGRFGKRFEPAPVLVAMADK 731
>gi|444705482|gb|ELW46908.1| Peroxisomal bifunctional enzyme [Tupaia chinensis]
Length = 724
Score = 361 bits (927), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 238/719 (33%), Positives = 375/719 (52%), Gaps = 42/719 (5%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+D +A+I L NPPVNAL++ ++ LK++ ++A + VKAIV+ G G+FS G +I+ F+
Sbjct: 8 HDCLALIRLRNPPVNALSLAVLQQLKERLQQAVTDRAVKAIVICGADGKFSAGANIHDFK 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ + + L V+ ++ +K +VAA++G+A GGGLELA+GCH RIA K ++
Sbjct: 68 --------TPRTNDTFGLFVDELQRTEKLVVAAIQGMAFGGGLELALGCHYRIAHAKARV 119
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
G PE+++G++PG TQ LPRL G+ A++++ + + + E KLG++D VV S+ + +
Sbjct: 120 GFPEVSIGLLPGARGTQLLPRLTGVPAALDLITSGRHVLAGEALKLGILDQVVNSDPVEE 179
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 248
R +A +A +P + S + A L+ +K P +AC+ I
Sbjct: 180 AVR-FAQRVAG--QPLESRRLYNKPVPSCPNMDAIFSDAILKMRKQHPGCLAQEACVRAI 236
Query: 249 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK---PRGV 305
+ + + G KE ++F L +R L + FFA+R+ +K K + +
Sbjct: 237 QATVQYPYEVGSKKERELFVYLRKSGQARALQYAFFAERSANKWSTPCGASWKTASAQPI 296
Query: 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDK 365
V V+G G MG GIA I VV E N E L K I +++ +R + Q
Sbjct: 297 SSVGVLGLGTMGRGIAICFAKAKIPVVAVESNKEQLETANKIITSSLEKEASR--MRQSG 354
Query: 366 ANNALKMLKGVLDYS--EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI 423
+ K L S E VD+VIEAV E + LK+++F+EL C P L TNTS +
Sbjct: 355 HPDPWSGPKPRLTSSMKELSGVDLVIEAVFEEMNLKKQVFAELSAVCKPEAFLCTNTSAL 414
Query: 424 DLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVV 483
D++ + T +IG HFF+PAHV+ LLE++ TS I +M + K I KV VVV
Sbjct: 415 DIDEIASSTGRPHLVIGTHFFAPAHVLRLLEVIPGRHTSPSTIATVMNLSKKIGKVGVVV 474
Query: 484 GNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAAT 543
GNC GF NR YS L+ G ID + FG +GPF++ DL G V +
Sbjct: 475 GNCFGFVGNRMLNHYSNQLYFLLEEGSKPEEIDQVLEEFGFKMGPFRVSDLTGLDVGWRS 534
Query: 544 SKEFDKAFP------------DRSFQSPLVDLLLKSGRNGKANGKGLYTYEK--GSKPKP 589
K P +R + P+ D+L + GR G+ GKG Y Y+K G KP
Sbjct: 535 RKGQGLTGPALPPGTPARRRGNRRY-CPIPDMLCELGRFGQKVGKGWYQYDKPLGRVHKP 593
Query: 590 DPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
DP + + + R +I +P ++++ EI+E L+ ++NE+ R+L EG+ +D
Sbjct: 594 DPWLSTFLAQYRETHHI----EPRTISQDEILERCLYSLINEAFRILGEGMAAGPEHIDV 649
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF--FKPSRFLEERATKGIP 706
G +P +RGG +F+A VG V L+K+ + +PS +L++ A++G P
Sbjct: 650 IYFSGYGWPRHRGGPMFYASTVGLPTVLEKLQKYYMQNPDIPQLEPSDYLKKLASQGNP 708
>gi|333899497|ref|YP_004473370.1| 3-hydroxybutyryl-CoA epimerase [Pseudomonas fulva 12-X]
gi|333114762|gb|AEF21276.1| 3-hydroxybutyryl-CoA epimerase [Pseudomonas fulva 12-X]
Length = 692
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 234/690 (33%), Positives = 357/690 (51%), Gaps = 47/690 (6%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVF---- 70
+A++ + NPPVNAL+ + L + A + V A+V+ G F G DI F
Sbjct: 13 IALLLIDNPPVNALSRQVREQLLECLHAALGDEAVTALVIACEGKTFVAGADIKEFDLPL 72
Query: 71 QKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQ 130
Q H +PDV + LIE+ KP+VAA++G A GGGLELA+ CH RIA Q
Sbjct: 73 QAPH-------LPDV-----LALIENAAKPVVAALQGSAFGGGLELALACHYRIAEGGAQ 120
Query: 131 LGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELL 187
LPE++LG+IPG TQRLPRL G+ A+++++ + + +E + GLID L
Sbjct: 121 FALPEVSLGLIPGAGGTQRLPRLCGMQVALDLVVGGERVGAERALRFGLIDK-------L 173
Query: 188 KVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLA----RLQAKKTAPNMPQHQA 243
V L A IA R+ + R + R+V + R +A + +P +A
Sbjct: 174 MVDGLRAGAIALAREVSGQPPRRVSE-------RQVPEYEPAAFRERATQLLRKLPGQEA 226
Query: 244 ---CLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGL 300
L +E+ +G+ E +VF + L HVFFA+R + V
Sbjct: 227 PPLALQALEQASRLSFEAGMAHEREVFIARRQSRQAHALRHVFFAERDLASRARVLGKRA 286
Query: 301 KPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGK 360
R + VAVIG G+MGSGIA I +L + + L +G +E +GLV +GK
Sbjct: 287 PTRPIEAVAVIGAGMMGSGIALCLANAGIATLLVDTQEQALQRGRSVVEGYFQGLVEKGK 346
Query: 361 LTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 420
L D+A +++ D++IEAV E + +KQ +F +L++ P ILATNT
Sbjct: 347 LDADEAARRTSLIRYDATLESVAGADLIIEAVFEDLAVKQDVFRQLDQFAKPGAILATNT 406
Query: 421 STIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVP 480
S +D+ + T+ ++G HFFSPA VM LLE+VRT + + +V+ ++ +G + K
Sbjct: 407 SYLDVTAIASATARPSDVVGMHFFSPAQVMKLLEVVRTPQVAPEVLASVLQLGARLGKTS 466
Query: 481 VVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVA 540
+ VGNC GF NR + A L+ G +D IR FG P+GPF+L DL+G +A
Sbjct: 467 IAVGNCYGFVGNRLLAVREREAGFLLEEGASPQDVDRVIRGFGFPMGPFELRDLSGVDIA 526
Query: 541 AATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVLPIIEE 599
+ D + +R + L++ L +GR G+ +G G Y Y++G + D V ++ E
Sbjct: 527 WRNRQARDLSEAER--RCDLIEQLHAAGRLGQKSGAGYYRYQQGQRRGVEDVFVSDLLAE 584
Query: 600 CRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPS 659
RR I P S+ ++EI++ LF ++NE+ +LE+GIV A+D+D + G FP
Sbjct: 585 HRRRRGI----TPRSIGDEEILQRCLFVMINEAAHLLEQGIVDSANDIDLVWLHGYGFPR 640
Query: 660 YRGGIVFWADAVGANYVYTSLKKWSQLYGN 689
YRGG+++ AD VG V +L W +
Sbjct: 641 YRGGLLYHADEVGLATVVGALDGWRAAFAQ 670
>gi|440795856|gb|ELR16970.1| 3hydroxyacyl-CoA dehydrogenase, NAD binding domain containing
protein [Acanthamoeba castellanii str. Neff]
Length = 570
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 224/546 (41%), Positives = 319/546 (58%), Gaps = 56/546 (10%)
Query: 3 APRVTMEVGNDG--VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR 60
A V++ V DG VA++T+ NPPVNAL+ + GL EA D+VK +V+TG +
Sbjct: 48 AESVSLHVHRDGSGVAVLTIDNPPVNALSRGVFDGLIRLTHEALEDDNVKLLVITGANQK 107
Query: 61 FSGGFDINVFQKVHGAGDVSLM---PDV----SVELV------VNLIEDCKKPIVAAVEG 107
F G +I Q + L+ PD S+ L+ +N +E KP+VAA++
Sbjct: 108 FVAGAEIASIQD-----SIELLRNTPDRLDADSMRLMEREHAWLNWLESQSKPVVAAMDT 162
Query: 108 LALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSK 164
ALGGGLE+AM CHAR+A +T+LGLPEL LGVIPG TQRLPRLVG+ KA++MML S+
Sbjct: 163 FALGGGLEVAMACHARVATRRTKLGLPELALGVIPGLGGTQRLPRLVGMKKAVDMMLSSR 222
Query: 165 SITSEEGWKLGLIDAVVTSE---ELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAR 221
S+ ++E LGL+D VV +L+ + +IA +P++R+ TD+L L EA+
Sbjct: 223 SLKADEAKNLGLVDEVVGGSDPAQLIDAAITVGKEIAEGMRPFVRATQLTDRLEPLPEAK 282
Query: 222 EVLKLARLQAKKTAPNMPQHQ-ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLV 280
+++ + PN H ACLD ++ G+ GG SGV E + + D S +
Sbjct: 283 KII-----DERAYPPNTVVHPFACLDAVQAGVQMGGSSGVDAERRAVVACLYNDASEAMT 337
Query: 281 HVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEY 340
H FFA+R T+ V VTD GL+PR +R V +IGGGLMGSGIATA + + I VV+KEV+ +
Sbjct: 338 HAFFAERKTANVSGVTDQGLQPRPIRSVGIIGGGLMGSGIATALLFSGIAVVIKEVSRQL 397
Query: 341 LLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQ 400
L + T+ AN+ V R +LT+++ + L M+ L +++F VDMVIEAV+E++ +KQ
Sbjct: 398 LDAVVNTVTANLDRAVERRRLTREQRDRLLSMVTPTLQFADFVAVDMVIEAVVENLKVKQ 457
Query: 401 KIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI----- 455
+F E+EK P CILATNTSTI ++ + T S R++G HFFS A +
Sbjct: 458 DVFREVEKVVKPDCILATNTSTIPIDQIATATQSAHRMLGVHFFSHASGGDRADARGVGA 517
Query: 456 -----VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGV 510
RT ++ AQ D G++ P + VNR FFP+ Q+A LLV GV
Sbjct: 518 GDRGHARTGQSPAQ---DAHRRGQL----PWIT-------VNRIFFPFFQAASLLVDCGV 563
Query: 511 DVFRID 516
D +RID
Sbjct: 564 DPYRID 569
>gi|134279808|ref|ZP_01766520.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia pseudomallei 305]
gi|134249008|gb|EBA49090.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
dehydrogenase [Burkholderia pseudomallei 305]
Length = 708
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 237/697 (34%), Positives = 356/697 (51%), Gaps = 19/697 (2%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D V ++T+ +PPVNAL+ + GL D + A + V A+++ G G F G DI F
Sbjct: 17 RDKVLVVTIDHPPVNALSADVRRGLVDALDAADADAAVGAVLIVGAGRNFIAGADIREFG 76
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K + V N IE KP+V A+ G ALGGGLE+A+ H R+A P +L
Sbjct: 77 KP--------PVPPLLPDVCNRIETSGKPVVVALHGAALGGGLEVALAAHYRLAVPGAKL 128
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
GLPE+ LG++PG TQR PRL+G A+E+ML + ++EE LGL+D + S++ L
Sbjct: 129 GLPEVQLGLLPGAGGTQRTPRLIGAKAALELMLSGRHASAEEALALGLVDRLAHSDDTLA 188
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 248
+ ++ A +R L + A L AR + + + +D +
Sbjct: 189 EGLAYVHELLAA-GAGVRRTRDAQGLADRAAAEAALDAARADVARHSRGLFSPARIVDAV 247
Query: 249 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 308
+ G+ E ++F E + GLVH FFAQR +K P T G PR + ++
Sbjct: 248 AAALAQPFDEGLRTERRLFVECLDSPQRAGLVHAFFAQREAAKSPE-TRRG-APRAIERI 305
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
V+GGG MG+GIA A + V + E + L +G +E GLV +G++T
Sbjct: 306 GVVGGGTMGAGIAVAALDAGFPVTMIERDDASLERGRAHVEKVYAGLVAKGRMTPAAQAA 365
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
L KG Y D+VIEAV E + +K+ +F+EL +AC P +LATNTS +D++ +
Sbjct: 366 RLARFKGGTSYEALAQADVVIEAVFEDMAVKKAVFAELARACKPGAVLATNTSYLDIDEL 425
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
+IG HFFSPA++M LLE+V + SA V+ + + + K+PV G C G
Sbjct: 426 AASVERAPDVIGLHFFSPANIMKLLEVVVPAKVSADVVATAFELARKLGKIPVRAGVCDG 485
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR Y +A ++ G ++ID AIR FG P+GP+Q++DLAG + AT K
Sbjct: 486 FIGNRVLAVYRTAADYMMEDGASPYQIDRAIREFGFPMGPYQVVDLAGGDIGWATRKRRA 545
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIM 607
R + D L + G G+ G+G Y Y G++ DP V II + R +
Sbjct: 546 PTRDPRLRYVEIGDRLCERGWFGQKTGRGYYLYPDGARVGTSDPEVEAIIAQARAAKGV- 604
Query: 608 PGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFW 667
P + T++EIV L ++NE V+ E I +R D+D + G FP +RGG + +
Sbjct: 605 ---SPRAFTDEEIVRRYLAAMINEGANVVHEKIALRPLDVDAVFLHGYGFPRHRGGPMHY 661
Query: 668 ADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
AD VG V ++ ++ F+KPS L + +G
Sbjct: 662 ADTVGLANVLADIRAFAGEDPVFWKPSPLLVDLVARG 698
>gi|260429999|ref|ZP_05783974.1| peroxisomal bifunctional enzyme [Citreicella sp. SE45]
gi|260418922|gb|EEX12177.1| peroxisomal bifunctional enzyme [Citreicella sp. SE45]
Length = 647
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 244/672 (36%), Positives = 356/672 (52%), Gaps = 46/672 (6%)
Query: 8 MEVGNDG-VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFD 66
+ V DG +A++TL NPPVNA++ + L + E + V+A VL G F G D
Sbjct: 4 LTVRRDGEIAVVTLDNPPVNAISEAVRKELFEMVGELDADPGVRAAVLICAGRTFLAGAD 63
Query: 67 INVFQKVHGAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
+ F K P V L VV+ IE +KP VAA+ G ALGGG E+AMGC R+
Sbjct: 64 VREFGK----------PPVEPHLPDVVDRIEGAEKPWVAAIHGAALGGGFEIAMGCRFRV 113
Query: 125 AAPKTQLGLPELTLGVIP---GTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVV 181
A ++GLPE+TLGVIP GT R PRL G+ A++++ + + + + K GLIDAVV
Sbjct: 114 AVESARVGLPEVTLGVIPGASGTVRTPRLAGIETAVDLVTSGRPMPAGKALKAGLIDAVV 173
Query: 182 TSEELLKVS-RLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQ 240
+ E V+ ALD A P + L + EA + AR +A + P
Sbjct: 174 SDLERDAVAFARAALD--AELPPPVSQ----RPLAPMPEA--FWQDARKRAAR-----PG 220
Query: 241 HQA---CLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 297
HQA LD + HG + E + F +L D + L H+FFA+RA K +
Sbjct: 221 HQAPLRALDSLRFATEHGFAEAMAHERETFLDLRGSDEAAALRHIFFAERAAPKPSALK- 279
Query: 298 IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 357
G++PR VR V VIGGG MG+GIA A + ++L E + E + +G+ + G V
Sbjct: 280 -GIEPRPVRTVGVIGGGTMGAGIAGACREAGMEILLIERDDEAVTRGLANVGKIFDGAVK 338
Query: 358 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 417
RGKL+++ + ++G DY+E D D+VIEAV E + +K+ +F+EL + C +LA
Sbjct: 339 RGKLSEEDRAGRMAGVRGSTDYAELADADLVIEAVFEEIGVKRAVFAELGRVCRADAVLA 398
Query: 418 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 477
TNTS +D + E R IG HFFSPAH+M LLEIV T T+ V+ +G+ +
Sbjct: 399 TNTSYLDPRAIAEGLPDPSRFIGLHFFSPAHIMKLLEIVPTPDTAPDVLATGFALGRALN 458
Query: 478 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGY 537
K+PV G C GF NR Y A LV GV + ID+A+R +G +GPF+ DL G
Sbjct: 459 KMPVQAGICEGFIGNRILKRYRAEAEALVKQGVAIAEIDAAMRGYGFRMGPFEAQDLGGL 518
Query: 538 GVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPI 596
+ A +E +A ++ L D+L+++GR G+ G G Y Y +G + PKP SV +
Sbjct: 519 DI-AFLQREGARA-EGQTMPETLGDILVRAGRKGQKTGGGWYDYAEGDRTPKPSASVAAL 576
Query: 597 IEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMS 656
+ + R+S +++ EI + ++ + E +L EGI D+D V G
Sbjct: 577 LAD--RVSG------SAALSGPEIADRLVGAMAAEGAAILREGIAQSPQDIDLVEVHGYG 628
Query: 657 FPSYRGGIVFWA 668
FP ++GG +F A
Sbjct: 629 FPRWKGGPMFAA 640
>gi|90420390|ref|ZP_01228298.1| fatty oxidation complex, alpha subunit FadB [Aurantimonas
manganoxydans SI85-9A1]
gi|90335724|gb|EAS49474.1| fatty oxidation complex, alpha subunit FadB [Aurantimonas
manganoxydans SI85-9A1]
Length = 691
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 233/704 (33%), Positives = 368/704 (52%), Gaps = 28/704 (3%)
Query: 4 PRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSG 63
P T++V + +A++TL NPPVNAL+ + G+ E A + VKAIVL G F
Sbjct: 6 PATTLDVEGE-IAVLTLDNPPVNALSHILREGVAAGLEAAAADPAVKAIVLICAGRTFIA 64
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DI F K A + + D IE KP++AA+ G ALGGGLELA+ CH R
Sbjct: 65 GADIKEFGKPIAAPTLQDLQD--------RIEALDKPVIAALHGTALGGGLELALACHYR 116
Query: 124 IAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAV 180
IA+P ++GLPE+ LG+IPG TQRLPRLVGL +A++M+L + + LG++D +
Sbjct: 117 IASPSAKVGLPEIKLGIIPGAGGTQRLPRLVGLPRALDMILTGTPVGAASAVTLGIVDEL 176
Query: 181 VTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQ 240
+ + R +A I +P R +L L+ AR + +
Sbjct: 177 AAGDLRAEALR-FANAIVTEGRPLRRIRDEAQRLDG-ENVDAALEGARERHGRKMRGYES 234
Query: 241 HQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGL 300
+ +D + G+ +E ++F EL+ S+ +VF A RA +K+ ++
Sbjct: 235 FERAMDAVANAARLPFDEGLAREREIFVELLGGTQSKAQRYVFGATRAVAKIADIP-ADT 293
Query: 301 KPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGK 360
R + +V +IG G MG GIA + I V + E E L +G TI N V RG+
Sbjct: 294 PTRKIGRVGIIGAGTMGGGIAMKFLSAGIPVTIIEQAQEALDRGTGTIAKNYAASVRRGR 353
Query: 361 LTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 420
+ + A A +L L++ + D D++IEA E + +K++IF+ L+ ILA+NT
Sbjct: 354 IRAEDAEKANALLTPSLEFDDLADCDLIIEAAFEEMAVKKEIFARLDAIARDGAILASNT 413
Query: 421 STIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVP 480
S +D++ + T ++G HFFSPA++M LLE+VR T+ VI M +G+ I K
Sbjct: 414 SYLDIDEIASVTKRPADVLGMHFFSPANIMKLLEVVRGRETAKDVIATAMKIGRDIGKTA 473
Query: 481 VVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVA 540
V+VG C GF NR + A L+ G + +D + FGLP+GPFQ+ DLAG +
Sbjct: 474 VLVGVCHGFVGNRMLSARQREANKLILEGAMPWDVDRVLTDFGLPMGPFQMADLAGLDL- 532
Query: 541 AATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEEC 600
++E K + + L ++ R G+ G Y Y++ K P ++EE
Sbjct: 533 -GWNRETSKG-------ETIRERLCEADRRGQKTSAGFYDYDENRKGSPS----AMVEEI 580
Query: 601 RRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSY 660
+ + G + ++ + EI+E +++P++NE ++L+EGI RASD+D + G +P Y
Sbjct: 581 ILIKSREEGFERRAIGDDEILERLVYPMINEGAKILDEGIAQRASDIDVVWINGYGWPVY 640
Query: 661 RGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
RGG +F AD +G + + ++++ +G F P+ LE A +G
Sbjct: 641 RGGPMFTADTIGPDVILDKMREFEARFGEDFAPAPMLERIAREG 684
>gi|309783449|ref|ZP_07678154.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
family protein [Ralstonia sp. 5_7_47FAA]
gi|404397820|ref|ZP_10989607.1| hypothetical protein HMPREF0989_04831 [Ralstonia sp. 5_2_56FAA]
gi|308917780|gb|EFP63472.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
family protein [Ralstonia sp. 5_7_47FAA]
gi|348609994|gb|EGY59703.1| hypothetical protein HMPREF0989_04831 [Ralstonia sp. 5_2_56FAA]
Length = 680
Score = 358 bits (920), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 239/684 (34%), Positives = 361/684 (52%), Gaps = 23/684 (3%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
+G+A+ITL NPPVN+L + + + +EA S V IVL G+ FS G D+ F
Sbjct: 6 NGIAVITLDNPPVNSLGHALRERIVQQLDEAQSNPAVHGIVLAGSEKAFSAGADVTEF-- 63
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
G + + V+ IE KP+VAA+ G+ALGGGLELA+ CH R+A ++G
Sbjct: 64 ----GTPRQLQAPILRTVLARIEASNKPVVAAITGVALGGGLELALACHGRVAQASARVG 119
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 189
LPE+TLG+IPG TQRLPRL+G++ A +M + T+ + GL DAVV S ++
Sbjct: 120 LPEITLGLIPGSGGTQRLPRLMGIAAAQALMATGQPQTASQLQDSGLFDAVV-SNDVTNA 178
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
+ A +A R P+ R+ DK+ L A +A +AK A Q +
Sbjct: 179 AIHHAAALATRGAPYPRA---RDKV--LEPAEVDAAIAAQRAKLNARQKLQPAYGALLDA 233
Query: 250 EGIVHGGYS-GVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 308
++ G+ +E ++F LV ++ L + F +R +K+P + PR VR V
Sbjct: 234 LAASALPFNEGLQRERELFLALVPTTAAQALRYQFKVEREATKLPAGAEN--SPRPVRTV 291
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
AV+G G MG+GIA A + + V+L E ++ L +G + + +G V GKL D+A
Sbjct: 292 AVVGAGTMGTGIAIAALDAGLAVLLLEQDAAALERGRVRVMEHYQGRVAAGKLGADEAAA 351
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
L G LD++ K+ D+VIEAV E + +KQ +F +++ P +LATNTS +D++ +
Sbjct: 352 NEARLVGTLDWARMKEADLVIEAVFEDLAVKQGVFQQIDTYARPGAVLATNTSYLDVDAI 411
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
TS ++G HFFSPA+VM LLE+VR +T+ VI M VG +KK PV+ GN G
Sbjct: 412 AAATSRPQDVLGLHFFSPANVMKLLEVVRGAQTAPDVIATGMAVGSALKKTPVLTGNGFG 471
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR + Y + ++ G +D+A+ +FG +GPF + DL+G +A K
Sbjct: 472 FIGNRIYNAYRRQCEFMLEDGAWPEDVDNALTAFGFAMGPFAVADLSGLDIAWRMRKAQA 531
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVLPIIEECRRLSNIM 607
R ++D L + GR G+ G G Y Y G + + D +V +I++ I
Sbjct: 532 LQRDPRERYVDILDQLCEMGRLGRKAGAGYYAYADGKQVRTTDSAVREVIQQASARRGI- 590
Query: 608 PGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFW 667
+ +T KEI L +VNE+ +++ EGI R SD+D V G FP + GG VFW
Sbjct: 591 ---ERRHLTPKEIQRRALLAMVNEAAQLIAEGIAARPSDVDVVLVQGYGFPRWEGGPVFW 647
Query: 668 ADAVGANYVYTSLKKWSQLYGNFF 691
A + + LK+ + G F
Sbjct: 648 ARQQDRSRLEADLKQLAAEAGYGF 671
>gi|431802538|ref|YP_007229441.1| 3-hydroxybutyryl-CoA epimerase [Pseudomonas putida HB3267]
gi|430793303|gb|AGA73498.1| 3-hydroxybutyryl-CoA epimerase [Pseudomonas putida HB3267]
Length = 694
Score = 358 bits (919), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 238/710 (33%), Positives = 362/710 (50%), Gaps = 46/710 (6%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVF---- 70
V +I + NPPVNAL+ + L + E+A D++AIV+ G F G DI F
Sbjct: 13 VGLIIINNPPVNALSREVREQLLARLEQAVGDVDIRAIVIVCEGRTFIAGADIKEFDLPL 72
Query: 71 QKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQ 130
Q H +PDV + IE KP++AA+ G LGGGLELA+ CH RIAAP TQ
Sbjct: 73 QAPH-------LPDV-----LTAIEQSPKPVIAAMHGSVLGGGLELALACHYRIAAPGTQ 120
Query: 131 LGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELL 187
GLPE+ LG+IPG TQRLPRL G+ A+++++ + E+ ++GL+D + S +
Sbjct: 121 FGLPEVGLGLIPGAGGTQRLPRLCGMLPAVDVVMGGEQPGVEQALEMGLLDRLSRSS-VF 179
Query: 188 KVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQACL 245
+ + +A +I +P R +RT ++ + R L +L ++ P L
Sbjct: 180 ESALEFAQEIIG--QPIPRCCNRTVSAFDPAVFQRRAQAILHKLVGQEAPP------LAL 231
Query: 246 DVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGV 305
++ Y G+ E +F +R L HVFFA+R + R V
Sbjct: 232 QALQAAWQVPFYEGMALERDIFISRRESAQARALRHVFFAERDLASRRRTLARQAPVRAV 291
Query: 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDK 365
VAVIG G MGSGIA I VL + L +G +E + +G+L+ +K
Sbjct: 292 DSVAVIGAGTMGSGIALCLANAGIATVLIDTQPAALDRGRAAVERYYVSALEKGRLSSEK 351
Query: 366 ANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL 425
A ++ D++IEAV E + +KQ +F L++ P ILATNTS +D+
Sbjct: 352 AAEHAGHIRYEGSLEAIAGADLIIEAVFEDLAVKQDVFRTLDRFAKPGAILATNTSYLDV 411
Query: 426 NIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 485
+ + T +IG HFFSPAHVM LLE+V+T V+ ++ +G + K V VG+
Sbjct: 412 DAIASVTDRPGDVIGMHFFSPAHVMKLLEVVKTAHLHPDVLATVLQLGGRLGKTAVAVGH 471
Query: 486 CTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSK 545
C GF NR + A L+ G +D +R FG PIGPF+L DLAG +A K
Sbjct: 472 CYGFVGNRLLAVREREATFLLEEGASPEDVDRVLRGFGFPIGPFELRDLAGVDIAWFNRK 531
Query: 546 EFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGS-KPKPDPSVLPIIEECRRLS 604
+ + L++ L ++GR G+ +G G Y YE+G K PDP V ++ E R
Sbjct: 532 GRGEHLGQAERRCNLIEQLHEAGRLGQKSGAGYYRYEEGQRKGSPDPFVAKMLVEHRHAR 591
Query: 605 NIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGI 664
+ +P +++ EI++ LF ++NE+ +LE+GIV +D+D + G FP YRGG+
Sbjct: 592 GL----EPRVISDDEILQRCLFVMINEAAHMLEQGIVDSPNDIDLIWIHGYGFPRYRGGL 647
Query: 665 VFWADAVGANYVYTSLKKWSQLYGNFFKPSR------FLEERATKGIPLS 708
+++AD +G + +L++W+ P R L+ RA + + LS
Sbjct: 648 LYYADQIGLTQIGEALEQWA-----LKHPDRQLNVCALLQSRAKERVSLS 692
>gi|312602592|ref|YP_004022437.1| enoyl-CoA hydratase/Delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase/ 3-hydroxyacyl-CoA
dehydrogenase/3-hydroxybutyryl-CoA epimerase
[Burkholderia rhizoxinica HKI 454]
gi|312169906|emb|CBW76918.1| Enoyl-CoA hydratase (EC 4.2.1.17) /
Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC
5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)
/ 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
[Burkholderia rhizoxinica HKI 454]
Length = 728
Score = 357 bits (917), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 250/713 (35%), Positives = 366/713 (51%), Gaps = 32/713 (4%)
Query: 3 APRVTMEVGND---GVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGG 59
AP T V ++ V ++T+ PPVNAL + + GL D + A D+V A++L G G
Sbjct: 23 APSPTQPVSHERHGKVLVVTIDYPPVNALGVAVRRGLIDAIDAAEGCDEVAAVLLLGAGR 82
Query: 60 RFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMG 119
F G DI F G L P S+ V IE C+KP+VAA+ G ALGGGLE+A+
Sbjct: 83 NFIAGADIREF------GKPPLPP--SLPQVCQRIESCRKPVVAAIHGAALGGGLEIALS 134
Query: 120 CHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGL 176
H RIA P +LGLPE+ LG++PG TQR PRL+G A+++ L ++ + +E +LGL
Sbjct: 135 AHYRIATPGAKLGLPEVQLGLMPGAGGTQRTPRLIGARAALDLALSARHVNIDEALQLGL 194
Query: 177 IDAVVTSEE-----LLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQA 231
+D + S++ L V L A AR ++L D + ++ AR
Sbjct: 195 LDRISQSDDTRAEGLAYVQALLASHAGARPTRCAKALADRDA------SHAAVQAARADV 248
Query: 232 KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 291
+ + + ++ IE I G+ E + F + + GLVH FFA+R +K
Sbjct: 249 VRRSRGLFSPLKIVEAIEAAIDLPFDEGMKLERQAFLQCLDSPQRAGLVHAFFAEREAAK 308
Query: 292 VPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEAN 351
P PR + V V+GGG MG+GIA A + V L E + L + ++
Sbjct: 309 TPESQHA--SPRTIDTVGVVGGGTMGAGIALAALDAGFPVTLIERDDASLARARAHVQRV 366
Query: 352 VRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACP 411
GL+ +GKL+ + L L G Y +VD+VIEAV E + +K+ IF+EL++ C
Sbjct: 367 YDGLIVKGKLSASASAATLSRLCGSTSYDALANVDLVIEAVFEDLVVKKAIFAELDRVCQ 426
Query: 412 PHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMT 471
+LATNTS +D++ + T +IG HFFSPA+VM LLEIV + A V+
Sbjct: 427 RGAVLATNTSYLDIDEIAASTGRASDVIGLHFFSPANVMKLLEIVVPAKVDADVVATAFE 486
Query: 472 VGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQL 531
K ++K PV G C GF NR Y +A ++ G ++ID AIR FG P+GP+Q+
Sbjct: 487 FAKRLRKTPVRAGVCDGFIGNRLLAVYRAAADAMMEDGASPYQIDRAIRDFGFPMGPYQV 546
Query: 532 LDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKP-KPD 590
+DLAG + A K R+ + D L + G G+ G+G Y YE G + PD
Sbjct: 547 IDLAGGDIGWAARKRRAATRDPRARYVQIPDRLCERGWFGQKTGRGYYVYESGQRTGTPD 606
Query: 591 PSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDA 650
P V II R+ + I P T++EIV L ++NE V+ E I +R D+D
Sbjct: 607 PEVEAIIASERQRAGITPR----EFTDEEIVRRYLAAMINEGANVVHERIALRPLDVDVV 662
Query: 651 SVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATK 703
V G FP Y GG + +AD G V ++++++ F++PS L E A K
Sbjct: 663 LVHGYGFPRYHGGPMHYADTRGLANVLAEIRQFARQDPLFWQPSPLLVELADK 715
>gi|114321260|ref|YP_742943.1| short chain enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase
[Alkalilimnicola ehrlichii MLHE-1]
gi|114227654|gb|ABI57453.1| 3-hydroxyacyl-CoA dehydrogenase [Alkalilimnicola ehrlichii MLHE-1]
Length = 714
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 233/705 (33%), Positives = 359/705 (50%), Gaps = 26/705 (3%)
Query: 8 MEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVLT-GNGGRFSGG 64
+ +G+DG+A+IT+ P +N L +V + + ++ ++ T G F G
Sbjct: 21 LALGDDGIAVITVDVPGERMNVLKGEMVREANALLDTLDEQPALRGVIFTSGKADNFIAG 80
Query: 65 FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
D+++ A + L + +E KP+VAA+ G LGGGLELA+ CH R+
Sbjct: 81 ADVHMLAACETAEAARELAHAGQRLF-DRLEAFPKPVVAAIHGTCLGGGLELALACHGRV 139
Query: 125 AA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDA 179
A P T+LGLPE+ LG++PG TQRLP VGL A+++ML + + + + K GL+D
Sbjct: 140 ATDHPATRLGLPEVQLGLLPGSGGTQRLPDRVGLPLALDLMLTGRQLRARQARKRGLVDD 199
Query: 180 VVTSEELLKVSRLWALDIAARRK-----PWIRSLHRTDKLGSLSEAREVLKLARLQAKKT 234
+V LL +R ++A R+ P L + LG R+ R KT
Sbjct: 200 LVAPPILLDAARKRIDELAEPRRHRPKRPLTTRLLENNPLGRRLVYRQS---ERTVQAKT 256
Query: 235 APNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPN 294
N P +D + G G +G+ E + F EL M +R L+ ++FA A K +
Sbjct: 257 HGNYPAPPRIIDAVRAGRERGRQAGLETERRHFGELAMTPEARALMALYFATTALKK-DS 315
Query: 295 VTDIGLKPRGVRKVAVIGGGLMGSGIA-TAHILNNIYVVLKEVNSEYLLKGIKTIEANVR 353
TD G++PR VR+V V+G GLMG+GIA V LK++ E L G++ I+ +R
Sbjct: 316 GTDAGVEPRPVRRVGVLGAGLMGAGIAYVTSAKAGTPVRLKDIALEGLNNGMRHIDGEIR 375
Query: 354 GLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPH 413
RG LT +A + LDY F +D+VIEAV E LK ++ +++E P H
Sbjct: 376 ARHKRGALTDFEATRQRTRVTPTLDYRGFGALDVVIEAVFEDPELKHRMLADVEAHGPEH 435
Query: 414 CILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVG 473
I A+NTS++ ++ + +R+IG H+FSP MPLLE++ T+RT +VI + +G
Sbjct: 436 VIFASNTSSLPISEIATGAQRPERVIGMHYFSPVEKMPLLEVIATDRTDPEVIATTVALG 495
Query: 474 KIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLD 533
+ K +VV + GF VNR PY A L+ GV + ID + FG P+GPF LLD
Sbjct: 496 RTQGKTVIVVRDGAGFYVNRILAPYLNEACRLLQEGVAIDHIDRTLVRFGFPVGPFALLD 555
Query: 534 LAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSV 593
G V+ + +AF +R + +L GR G+ +GKG Y Y++ K
Sbjct: 556 EVGLDVSEKVAPILHRAFGERMTPVDVGGRMLADGRKGRKSGKGFYRYDR----KRGKGG 611
Query: 594 LPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVL 653
P+ E RL + PG + + I++ + P++NE+ R +EGI+ D D +V
Sbjct: 612 RPVDEGVYRLLGLAPG---RDMAPEAIIDRTVLPMINEAVRCRDEGIIRCERDGDIGAVF 668
Query: 654 GMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLE 698
G+ FP +RGG + GA V L+ + +G F P+ L+
Sbjct: 669 GIGFPPFRGGPFHYLRQQGAAGVTERLQALAAEHGPRFAPAPSLQ 713
>gi|334145451|ref|YP_004538661.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Novosphingobium sp.
PP1Y]
gi|333937335|emb|CCA90694.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding [Novosphingobium sp.
PP1Y]
Length = 671
Score = 357 bits (915), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 233/687 (33%), Positives = 357/687 (51%), Gaps = 37/687 (5%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
++GV I++ +PPVNAL + AGL + V+AI+ G F G DI F
Sbjct: 10 HNGVLIVSCDSPPVNALGAGVRAGLLEGLTLGLDDPGVEAIIFACAGRTFFAGADIAEFG 69
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K M S+ +V I++ KP++AA+ G ALGGG ELA+ CH R+A ++
Sbjct: 70 KP--------MKTPSLSDLVVCIDNAHKPVIAAIHGTALGGGCELALACHYRVATRSAKI 121
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
GLPE+ LG++PG TQRLPRLVG++ A+EM L + +++ +GL+DAV L++
Sbjct: 122 GLPEVRLGLVPGAGGTQRLPRLVGIAMALEMAALGEPMSAARAKDIGLVDAVTADGALVE 181
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 248
+ A +A R++P L R + + + + + A++ A + + I
Sbjct: 182 HALGLARTVA-RQRP----LPRVSEQRVVPDPEAIAQFRHTHARRIA-GLHASTMAITCI 235
Query: 249 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRK 307
E+ G+ E F L+ S HVFFA+R +++ + +DI R V +
Sbjct: 236 EKAAELPFAEGLAFERATFMRLMADPRSAAQRHVFFAERQAARIDGIGSDIA--ARSVER 293
Query: 308 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 367
V +IG G MGSGIA + + V L E +++ L +G + I V +G++T +A
Sbjct: 294 VGIIGAGTMGSGIAINFLSAGLAVTLLETSADALKRGQEQIANTFSSNVAKGRMTARQAE 353
Query: 368 NALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 427
AL +L LD+ D+VIEAV E++ +K+ IF+ L+ ILA+NTS +DL+
Sbjct: 354 QALALLDVKLDFDALGACDLVIEAVFENMNIKKDIFARLDHVAREGAILASNTSYLDLDE 413
Query: 428 VGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 487
+ TS ++G HFFSPAH+M LLE+VR T+ V++ M + + I KV VV G
Sbjct: 414 IAATTSRPSDVVGLHFFSPAHIMKLLEVVRGNCTAPDVLVTAMALARRIGKVAVVAGVTP 473
Query: 488 GFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEF 547
GF NR A L+ G +ID R+FG+P+GPFQ+ DLAG +
Sbjct: 474 GFIGNRLLRCRQNEAMNLLLEGATPEQIDCVHRNFGMPMGPFQMTDLAGVDIG------- 526
Query: 548 DKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIM 607
D + + + L GR G+ G G Y Y++ KP P P V I++E R+
Sbjct: 527 --WHRDPARVETIREALCAEGRWGQKTGAGFYDYDERRKPHPSPRVAEILQEFRKKRK-- 582
Query: 608 PGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFW 667
++++ EI+ LFP+VNE +L EG RASD+D A V G +P++RGG +FW
Sbjct: 583 --SSERAISDDEILARTLFPMVNEGALLLLEGKAQRASDIDVAWVYGYGWPAWRGGPMFW 640
Query: 668 ADAVGANYVYTSLKKWSQLYGNFFKPS 694
A G + +L ++YG P+
Sbjct: 641 AREQGFEKIAAAL----EMYGFVVAPN 663
>gi|88810261|ref|ZP_01125518.1| fatty oxidation complex, alpha subunit [Nitrococcus mobilis Nb-231]
gi|88791891|gb|EAR23001.1| fatty oxidation complex, alpha subunit [Nitrococcus mobilis Nb-231]
Length = 726
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 242/709 (34%), Positives = 376/709 (53%), Gaps = 32/709 (4%)
Query: 4 PRVTMEVGNDGVAIITLINP--PVNALA---IPIVAGLKDKFEEATSRDDVKAIV-LTGN 57
P + +E DG+A I + P N L + + L D+ E S VK I+ ++G
Sbjct: 16 PALCLERREDGIACIRIDCPGQSQNTLGRAEMNQASQLLDRLERDES---VKGIIFISGK 72
Query: 58 GGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELA 117
G F G DI++F+ A + S + + + + I + P+VAA++G+ GGGLELA
Sbjct: 73 AGSFVAGVDIHLFEAFKSAAEASALSAEG-QAIFDRIAAFRVPVVAAIDGVCFGGGLELA 131
Query: 118 MGCHARIA--APKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGW 172
+ CHAR+ + +T+LGLPE+ LG++PG TQRLPRL+GL A+++ML K + + +
Sbjct: 132 LACHARVCTGSEQTRLGLPEVQLGLLPGGGGTQRLPRLIGLPAALDLMLTGKRLRATQAQ 191
Query: 173 KLGLIDAVVTSEELLKVSRLWA----LDIAARRKPWIRSLHRTDKLGSLSEAREVLKLAR 228
+LGL+D V + LL + W R W+++L G+ V K AR
Sbjct: 192 RLGLVDDRVPTSILLDTALQWVEVCQRGRVRRGGGWLQALTAWALRGNPLGRAMVFKQAR 251
Query: 229 LQ-AKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQR 287
Q A +T N P ++ +E G+ G G+ EA+ F EL M +R L++++FA
Sbjct: 252 KQVAARTQGNYPAPTRLIECVERGLSEGIEPGLKAEAQAFGELAMTPQARQLINLYFATS 311
Query: 288 ATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIA-TAHILNNIYVVLKEVNSEYLLKGIK 346
A K V D ++PR VR+V V+G GLMG+GI+ + V LK+V + L G+K
Sbjct: 312 AMKKDTGVADPDVEPRAVRRVGVLGAGLMGAGISFVTAARAKVPVRLKDVEPKGLASGLK 371
Query: 347 TIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSEL 406
I+ + ++R +++ +A A + LD+S + +D+VIEAV E + LK ++ E+
Sbjct: 372 YIDERIDQRLSRHAISRFEAERARCRVTPTLDFSGCRSLDLVIEAVFEDLELKHRMIREV 431
Query: 407 EKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVI 466
E C I A+NTS++ L + + +IG H+FSP MPLLE++ ERT+ +VI
Sbjct: 432 EANCNADVIFASNTSSLPLARIAQAAERPQNVIGLHYFSPVDRMPLLEVIAHERTAPEVI 491
Query: 467 LDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPI 526
M G+ K P+VV + GF VNR PY A L+ GV + RID A+ FG P+
Sbjct: 492 ATAMAFGRAQGKTPIVVRDGVGFYVNRILAPYLNEAVHLLEEGVAIDRIDQALVRFGFPV 551
Query: 527 GPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTY-EKGS 585
GPF+LLD G + A + +AF +R V+ +L++ R GK NG+G Y Y K S
Sbjct: 552 GPFKLLDEVGIDIIAKVAPVLHEAFGERMRPVSAVERMLEADRLGKKNGRGFYRYGGKRS 611
Query: 586 KPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRAS 645
+ D SV ++ R + + IVE L ++NE+ R L+EGI+ A
Sbjct: 612 GKEVDESVYGLLAVSTRQ----------EMADTAIVERTLILLLNEAARCLDEGIIREAR 661
Query: 646 DLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPS 694
D D +V G+ FP + GG + D+ G + V ++L + G + P+
Sbjct: 662 DGDVGAVFGIGFPPFLGGPFRYMDSRGLDAVASALAGFESSVGRRYAPA 710
>gi|170695997|ref|ZP_02887135.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia graminis
C4D1M]
gi|170139077|gb|EDT07267.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia graminis
C4D1M]
Length = 710
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 245/704 (34%), Positives = 369/704 (52%), Gaps = 39/704 (5%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
V ++T+ + PVNAL+ + GL E A S V+A++L G G F G DI F K
Sbjct: 22 VLLVTIDHAPVNALSADVRRGLLAAIEAADSDRSVEAVLLVGAGRNFIAGADIREFGK-- 79
Query: 75 GAGDVSLMPDV--SVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
P V S+ V N IE C KP+VAA+ G ALGGGLE+A+ H RIA +LG
Sbjct: 80 --------PPVPPSLPDVCNRIEACTKPVVAAIHGAALGGGLEVALAAHYRIAVEGAKLG 131
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAV-----VTSE 184
LPE+ LG++PG TQR PRL+G A++++L + +++E LGL+D + V +E
Sbjct: 132 LPEVQLGLLPGAGGTQRTPRLIGAEAALDLILSGRHASAKEALALGLVDRLGASGDVLAE 191
Query: 185 ELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSE---AREVLKLARLQAKKTAPNMPQH 241
L V L A D A RR T G+LS+ + + AR + K + +
Sbjct: 192 GLAYVHELLAGDAAVRR---------TRDAGALSDRAASLAAVAAARAETAKKSRGLFSP 242
Query: 242 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 301
+D IE I G+ E ++F + + GL+H FFA+R K P D K
Sbjct: 243 LKIVDAIEAAITQRLEEGLRVERQLFLQCLDSPQRAGLIHAFFAEREVLKAPETRDA--K 300
Query: 302 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 361
PR + V V+GGG MG+GIA A + + V + E + L +G IE GL+ +G+L
Sbjct: 301 PRALNAVGVVGGGTMGAGIAVAVLDAGLPVTMIERDEASLARGRAHIEKVYDGLIAKGRL 360
Query: 362 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 421
+ K + + G Y + D+VIEAV E + +KQ +F+EL++ C +LATNTS
Sbjct: 361 SAVKKDEFMARWTGSTSYDALSNADLVIEAVFEDLAVKQAVFAELDRVCKAGAVLATNTS 420
Query: 422 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 481
+D++ + S + G HFFSPA++M LLE+V + SA V+ + K ++K PV
Sbjct: 421 YLDIDAIAASISRPADVTGLHFFSPANIMKLLEVVVPQAVSADVVATAFELAKKLRKTPV 480
Query: 482 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAA 541
G C GF NR Y +A ++ G ++ID+A+R+FG P+GPFQ++DLAG +
Sbjct: 481 RAGVCDGFIGNRILAVYRSAADAMMEDGASPYQIDAAMRAFGFPMGPFQVVDLAGGDIGW 540
Query: 542 ATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKP-KPDPSVLPIIEEC 600
A K + + D L + G G+ G+G Y Y +GS+ +PDP V II+
Sbjct: 541 AARKRRAATRDPAARYVQIADRLCERGWFGQKTGRGFYLYPEGSRSGQPDPEVEAIIDAE 600
Query: 601 RRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSY 660
R + I P + T+ EI+ + ++NE V+ E I +R D+D + G FP Y
Sbjct: 601 RERAGITPR----NFTDDEIIRRYMAAMINEGANVVHERIALRPLDVDVTLLYGYGFPRY 656
Query: 661 RGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
RGG + +AD VG + ++ +++ F++ S L E +G
Sbjct: 657 RGGPMKYADMVGLPSILADIRGFAKEDPLFWQASPLLVELVERG 700
>gi|121281866|gb|ABM53499.1| putative enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA
dehydrogenase PaaC [uncultured bacterium CBNPD1 BAC
clone 67]
Length = 708
Score = 355 bits (912), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 233/700 (33%), Positives = 363/700 (51%), Gaps = 34/700 (4%)
Query: 8 MEVGNDG-VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFD 66
+ V DG VA++ + NPPVNA + + L D + A S + AI++ G G F+ G D
Sbjct: 21 LRVWRDGEVAVLEIDNPPVNATSQAVRRALFDAVQRAQSEPETLAILICGAGRTFTAGGD 80
Query: 67 INVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA 126
I+ F K +PD+ +N IE+ KPIV A G ALGGG E+ +G H RI A
Sbjct: 81 ISEFGK---PPREPHLPDL-----INRIEESAKPIVVAWHGTALGGGCEIGLGAHKRIIA 132
Query: 127 PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS 183
+GLPE+ LG++PG TQRLPRLVG A++++ + + ++E +LGL+DA+
Sbjct: 133 KDGFVGLPEVKLGLLPGAGGTQRLPRLVGPVAALDLIASGRMVGAQEALRLGLVDAIARK 192
Query: 184 E---ELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQ 240
+ E ++++R + + +P + SL T + V K+ R AP
Sbjct: 193 DLRAEAIELAR----GLIGQMQPRL-SLRATPAAEPEAWQAMVAKVNREARGCIAP---- 243
Query: 241 HQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGL 300
Q ++++ + + +G E + F EL+ + SRGL H+F A+R K P + +
Sbjct: 244 -QRAIELVSQSLTLPFSTGQPNERRTFFELMNSEQSRGLRHLFLAEREAGKRPELASV-- 300
Query: 301 KPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGK 360
PR + ++ +IG G MGSGIA A + V+L E + L G++ + + G+
Sbjct: 301 PPRDLHQIGIIGAGTMGSGIAVAFLDAGYKVMLVEADDTALQAGLERVNGLYLRSIRSGR 360
Query: 361 LTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 420
+ ++ N L L + S D+VIEA+ E + +K ++ +L P ++ATNT
Sbjct: 361 IDENTRLNRLSNLVPTTEMSRLAACDLVIEAIFEDLGVKLELMKKLATLLPASTLIATNT 420
Query: 421 STIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVP 480
S +DL + + + +R +G HFFSPAHVM LLEIVR RT + + + +G+ +KK+
Sbjct: 421 SYLDLEPMADALPAPERFLGLHFFSPAHVMKLLEIVRARRTGLEALSTALAIGRKLKKIA 480
Query: 481 VVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVA 540
V+ G C GF NR + ++ G ID+A+ +FGL +GPF + DLAG +A
Sbjct: 481 VISGVCEGFIGNRILAKFRAQCEFMLEEGALPREIDAAMEAFGLAMGPFAVQDLAGLDIA 540
Query: 541 AATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEEC 600
A K PLVD L + GR G+ GKG Y YE G + PDP+V ++
Sbjct: 541 WARRKRLAATRDPTDRDVPLVDRLCEQGRFGQKAGKGWYAYENGRR-VPDPAVEAMVR-- 597
Query: 601 RRLSNIMPGGKPI-SVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPS 659
++ G+P S + +EI ++ +VNE R+L EGI R +D+D V G FP+
Sbjct: 598 ---AHAAATGRPQRSFSAQEIQTRVVTAMVNEGARILGEGIAARPADIDLVLVHGYGFPN 654
Query: 660 YRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEE 699
+RGG + ADA+G V + G F+ + L E
Sbjct: 655 WRGGPMHHADALGLKQVLAVAQNTEARDGRGFEVAPLLAE 694
>gi|134297067|ref|YP_001120802.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
[Burkholderia vietnamiensis G4]
gi|134140224|gb|ABO55967.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
[Burkholderia vietnamiensis G4]
Length = 711
Score = 355 bits (911), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 242/699 (34%), Positives = 364/699 (52%), Gaps = 23/699 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D + ++T+ +PPVNAL+ + GL D + A + V+A+++ G G F G DI F
Sbjct: 20 RDALLVVTIDHPPVNALSADVRRGLADALDAAQADHAVRAVLIVGAGRNFIAGADIREFG 79
Query: 72 KVHGAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKT 129
K P V L V IE KP+V A+ G LGGGLE+A+ H R+A P
Sbjct: 80 K----------PPVPPSLPDVCERIESSAKPVVVALHGATLGGGLEVALAAHYRLALPGA 129
Query: 130 QLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL 186
+LGLPE+TLG++PG TQR PRL+G A+++ML + ++EE LGL+D V S++
Sbjct: 130 KLGLPEVTLGLLPGAGGTQRTPRLIGAKAALDLMLTGRHASAEEARALGLVDRVARSDDT 189
Query: 187 LKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLD 246
L +A ++ + P +R L + A+ L AR + K + + +D
Sbjct: 190 LAEGLAYAQELVSLGAP-VRRTRDAQGLAERTAAQAALAAARAELPKKSRGLFSPAKIVD 248
Query: 247 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 306
+E + +G+ E +F + + GLVH FFA+R +K P R V
Sbjct: 249 AVEAALTLSFDAGMKLERSLFLQCLDSPQRAGLVHAFFAEREAAKAPEARRA--SARAVE 306
Query: 307 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 366
+V V+GGG MG+GIA A + + V + E + L +G +E LV +G++T D
Sbjct: 307 RVGVVGGGTMGAGIAVAALDAGLPVTMIERDDASLARGRAHVEKVYDALVAKGRMTPDAR 366
Query: 367 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 426
+ L G Y D+VIEAV E + +KQ +F+EL + C P +LATNTS +D++
Sbjct: 367 AARVARLDGSTRYDALAQADVVIEAVFEDMAVKQAVFAELARVCKPGAVLATNTSYLDID 426
Query: 427 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 486
+ +IG HFFSPA+VM LLEIV +R SA+V+ + + +KK PV G C
Sbjct: 427 ALAAGIDRPTDVIGLHFFSPANVMKLLEIVVPKRVSAEVVATAFALARQLKKTPVRAGVC 486
Query: 487 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKE 546
GF NR Y +A L+ G ++ID A+R FG P+GPFQ++DLAG + AT K
Sbjct: 487 DGFIGNRILAVYRTAADYLMEDGASPYQIDRAVRGFGFPMGPFQVVDLAGGDIGWATRKR 546
Query: 547 FDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSN 605
R+ + D L + G G+ +G+G Y Y G++ PDP V I+ R
Sbjct: 547 RAATRDPRARYVEISDRLCERGWFGQKSGRGYYLYPDGARVGTPDPEVDAIVAAERAKKG 606
Query: 606 IMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIV 665
I+P S ++ EI+ L ++NE V+ E I +R D+D + G FP +RGG +
Sbjct: 607 IVPR----SFSDDEILRRYLAAMINEGANVVHERIALRPLDVDAVFLYGYGFPRHRGGPM 662
Query: 666 FWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+AD VG V ++ ++ F++PS L E +G
Sbjct: 663 HYADTVGLANVLADIRAFANEDPLFWRPSPLLVELVERG 701
>gi|220923283|ref|YP_002498585.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Methylobacterium
nodulans ORS 2060]
gi|219947890|gb|ACL58282.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Methylobacterium
nodulans ORS 2060]
Length = 691
Score = 355 bits (910), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 239/693 (34%), Positives = 353/693 (50%), Gaps = 27/693 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA+IT+ +PPVNAL+ + GL + + V A+V+TG GRF G DI +
Sbjct: 16 VAVITIDHPPVNALSQAVRQGLLAAVRKLDADSSVTALVITGVEGRFIAGADIREMNQPP 75
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G L+PDV V I+ C KP++AA+ G ALG GLE+A+ C AR+ P QLGL
Sbjct: 76 GE---PLLPDV-----VAAIDACTKPLIAAIGGPALGAGLEIALACDARLGGPAAQLGLT 127
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 191
E+ LG+IPG TQRLPRLVG+++A+ ++ + + + E LGL+D VVT + LL +
Sbjct: 128 EIRLGLIPGAGGTQRLPRLVGVARAVSLIGEGRVLKAPEAHDLGLLDEVVTGD-LLVAAL 186
Query: 192 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 251
A +A RR + + R D A E L +R A+K A ++P +A + VI
Sbjct: 187 ERAPHVAKRRVSEL-PVPRGDA------AAEALAFSR--ARKAAKSVPAIEAAIRVISAA 237
Query: 252 IVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVI 311
SG+ +E F L +R L H+FFA+R KVP + + R V VAVI
Sbjct: 238 HEGDFASGLAQERAAFLALRGSSEARALRHLFFAEREAGKVPGMAEA--VARHVAMVAVI 295
Query: 312 GGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALK 371
G G MG+GIA A + V+L E + G+ + V G++++ L
Sbjct: 296 GAGTMGAGIAVALADAGLPVMLVERDDTAASAGLSRVRDLYERQVKSGRISEADVAERLG 355
Query: 372 MLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEK 431
+ D+S D+++EA E + +K IF L+ +LATNTS +DL+ +
Sbjct: 356 RILPTSDWSCLAAADLIVEAAFEDMAVKADIFRRLDAVAKSGAVLATNTSYLDLDAIAAA 415
Query: 432 TSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAV 491
T ++G HFF+PAHVM LLE+VR T+ +VI +T+ + K PVV GNC GF
Sbjct: 416 TCRPQDVVGLHFFAPAHVMKLLEVVRGRATAPEVIATALTLARRAGKQPVVAGNCDGFIG 475
Query: 492 NRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAF 551
NR + Y + A LV G +D+A+ ++G +G F + D++G +A A K
Sbjct: 476 NRIYAAYRRHAEYLVEDGAAPDAVDAALEAYGFAMGIFTVSDMSGLDIAFAMRKRRAATR 535
Query: 552 PDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGK 611
R + D L + R G+ G Y Y+ + DP V +I R I+
Sbjct: 536 DSRERYVAIPDRLCELQRLGRKTNAGWYAYDAAGRKSVDPLVTQLIAAARAEKGIV---- 591
Query: 612 PISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAV 671
P + T EI +L + NE + L EG+ +RASD+D V G FP +GG ++ AD +
Sbjct: 592 PRTFTALEIQNRLLAVMANEGAKALAEGVALRASDIDVVFVNGYGFPRTKGGPMWAADQM 651
Query: 672 GANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
G V +K + G+ +P+ L E A G
Sbjct: 652 GLPRVLAEMKAAQEAGGSGSEPAPLLVELARTG 684
>gi|407775890|ref|ZP_11123181.1| 3-hydroxyacyl-CoA dehydrogenase [Thalassospira profundimaris
WP0211]
gi|407280962|gb|EKF06527.1| 3-hydroxyacyl-CoA dehydrogenase [Thalassospira profundimaris
WP0211]
Length = 653
Score = 355 bits (910), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 237/674 (35%), Positives = 371/674 (55%), Gaps = 43/674 (6%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
VT+ + N +A+IT+ NPP+NA + + +G+ D ++ DD++A +L +G F G
Sbjct: 4 VTLTLEN-AIAVITINNPPINATSHAVRSGIVDALDQIDGNDDIRAAILICDGKTFIAGA 62
Query: 66 DINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA 125
D++ F + A ++PDV + IE KP +AA+ G ALGGGLE+A+GCH RIA
Sbjct: 63 DVSEFGQPPKA---PILPDV-----IKRIEAATKPFIAAIHGHALGGGLEVALGCHYRIA 114
Query: 126 APKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 182
+LGLPE+ LG+IPG T RLPRL+ +S+A+ M+ K I++ + ++GL+DA+ T
Sbjct: 115 DSTAKLGLPEVNLGLIPGAGGTTRLPRLIPVSEAVSMITSGKPISATKANEIGLLDAI-T 173
Query: 183 SEELLKVSRLWALDIAARRKP-WIRSLHRTDKLGSLSEAREVLKLARLQAK-KTAPNMPQ 240
L +R +A I +R P W+ + D S ++ ++ + +A+ + AP
Sbjct: 174 HGALGDAARDFAKTILSRGTPAWLLARDPIDAPSS-AQWDDITSATKKKARGQVAP---- 228
Query: 241 HQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGL 300
A + I GI HG +G+ E + F EL D S+ L H+FFA+R+ +K+P + G+
Sbjct: 229 -LAAISAIRNGIEHGPDAGLDFEREKFIELRDSDQSKALRHIFFAERSVAKLPELK--GV 285
Query: 301 KPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGK 360
+P + +V VIGGG+MG+GIATA +L V + E + G T+E ++ G + RG
Sbjct: 286 EPNPIHQVGVIGGGIMGAGIATASLLAGFDVTIIERDEAACDNGRATVEKHIAGSLKRGL 345
Query: 361 LTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 420
++QD+ + + L +DY+ D+V+EAV E + +K +F +L C +LA+NT
Sbjct: 346 ISQDRFDALMASLSTSIDYAALSHADLVVEAVFEDMAVKHDVFGKLSLHCKADAVLASNT 405
Query: 421 STIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVP 480
S +D+N + + + R+IG HFFSPAH+M LLE+VRT+ AQ + + + K+
Sbjct: 406 SYLDINEIASRCINPQRVIGLHFFSPAHIMKLLEVVRTKSADAQSLATAFEFARALGKIA 465
Query: 481 VVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVA 540
V G C GF NR Y + ++ G +ID+A+ FG P+G F + D+AG ++
Sbjct: 466 VPCGVCDGFIGNRIMSAYRKHCEYMLEDGALPDQIDAAMVEFGFPMGLFAMQDMAGLEIS 525
Query: 541 AATSKEFDKAFPDRSFQSP------LVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSV- 593
AT K F+ P L D L + GR GK NG G Y Y+ K +PDP V
Sbjct: 526 WATRKRL------APFRDPAERYVALGDYLCEMGRFGKKNGLGWYHYDDNGKAQPDPEVD 579
Query: 594 -LPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASV 652
L I E ++ G T EI+++IL + +E ++L EGI A +D V
Sbjct: 580 ALVIAESAKK------GITRRDFTSTEILDVILGAMRSEGDKILAEGIANNADAIDVVMV 633
Query: 653 LGMSFPSYRGGIVF 666
G FP ++GG +F
Sbjct: 634 NGYGFPRHKGGPMF 647
>gi|291400311|ref|XP_002716515.1| PREDICTED: enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A
dehydrogenase-like [Oryctolagus cuniculus]
Length = 723
Score = 354 bits (909), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 241/722 (33%), Positives = 389/722 (53%), Gaps = 51/722 (7%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
+ +A+I L NPPVNA+++ +++G+ + ++A + VKAIV+ G GG FS G DI+ FQ
Sbjct: 9 NSLALIRLRNPPVNAISLAVLSGISEGLKKAVTDHTVKAIVICGAGGNFSAGADIHSFQA 68
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+G + + +V+ + +KP+VAA++G+ALGGGLELA+GCH RIA + ++G
Sbjct: 69 PRNSG-------LGLGHLVDELSRNEKPVVAAIQGVALGGGLELALGCHYRIAHAQARVG 121
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS---EEL 186
LPE+TLG++PG TQ LPRL+G+ A++++ + I++ + KLG++D VV S EE
Sbjct: 122 LPEVTLGLLPGGRGTQLLPRLIGVPAALDLITSGRHISAGDAHKLGILDEVVNSDPTEEA 181
Query: 187 LKVS-RLWALDIAARR---KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQ 242
+K + R+ + +RR KP ++SL D + A ++ +K P +
Sbjct: 182 IKFAQRVLGQPLESRRLCNKP-VQSLPNMDT---------IFSDAFVKMRKQYPGCLAPE 231
Query: 243 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK- 301
C+ I+ + + G+ +E ++F L +R L + FFA++ +K + K
Sbjct: 232 TCVRAIQAAVKYPYTVGIKEEEELFMYLRESGQARALQYAFFAEKNANKWSTPSGASWKT 291
Query: 302 --PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRG 359
R + V V+G G MG GIA + I V+ E + + L + I + + +
Sbjct: 292 ASARPISSVGVLGLGTMGRGIAISFARAKIPVIAVESDKKQLEAANRVITSILEKEAS-- 349
Query: 360 KLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATN 419
K+ Q ++ + E VD+V+EAV E + LK+++F+EL C P L TN
Sbjct: 350 KMQQSGHPGSVPKPRLTSSLKELSGVDLVVEAVFEDMALKKQVFAELSAVCKPEAFLCTN 409
Query: 420 TSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKV 479
TS +D++ + T +IG HFFSPAHVM LLE++ ++ +S I +M + K IKKV
Sbjct: 410 TSALDVDEIASSTDRPHMVIGTHFFSPAHVMRLLEVIPSKYSSPTTIATVMNLSKRIKKV 469
Query: 480 PVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGV 539
VVVGNC GF NR PY L+ G ID + FG +GPF++ DLAG V
Sbjct: 470 GVVVGNCHGFVGNRMLRPYYDQTYFLLEDGSKPEEIDQVLEEFGFKMGPFRVSDLAGLDV 529
Query: 540 A-------AATSKEFDKAFPDRSFQS----PLVDLLLKSGRNGKANGKGLYTYEK--GSK 586
T P R + P+ D+L +SGR G+ GKG Y Y+K G
Sbjct: 530 GWRIRKGQGLTGPTLPPGTPARKRNNRRYCPIPDMLCESGRFGQKVGKGWYQYDKPLGRI 589
Query: 587 PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASD 646
KPDP + + + R +I +P ++++EI+E L+ ++NE+ R+L EG+
Sbjct: 590 HKPDPWLSNFLSQYRETYHI----EPRVISQEEILERSLYALINEAFRILGEGMAASPEH 645
Query: 647 LDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF--FKPSRFLEERATKG 704
+D + G +P +RGG +F+A VG V L+K+ + + +PS +L++ A++G
Sbjct: 646 IDVIYLYGYGWPRHRGGPMFYASTVGLPKVLEKLEKYYRQNPDIPQLEPSAYLKKLASQG 705
Query: 705 IP 706
P
Sbjct: 706 NP 707
>gi|149731446|ref|XP_001498786.1| PREDICTED: peroxisomal bifunctional enzyme [Equus caballus]
Length = 723
Score = 354 bits (909), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 242/723 (33%), Positives = 383/723 (52%), Gaps = 51/723 (7%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+ +A+I L NPPVNA+++ ++ G+++ +A + VKAIVL G GG FS GFDI F
Sbjct: 8 QNRLALIRLRNPPVNAISVAVLRGIQEGLRKALTDHTVKAIVLCGAGGYFSAGFDIRGF- 66
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ D ++ +V+ ++ KP+VAA++G ALGGGLELA+GCH RIA K Q+
Sbjct: 67 ------SAPRISDFTLGSLVDELQRNNKPVVAAIQGFALGGGLELALGCHYRIAHAKAQV 120
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS---EE 185
GLPE++LG++PG TQ LPRL+G+ A++++ + I ++E KLG++D +V S EE
Sbjct: 121 GLPEVSLGLLPGGRGTQLLPRLIGVPAALDLITSGRCILADEALKLGILDEIVNSDPVEE 180
Query: 186 LLKVS-RLWALDIAARR---KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 241
+K++ R+ + +RR KP ++SL D + SEA L+ +K P
Sbjct: 181 AIKLAQRVSDQPLESRRLYNKP-VQSLPNMDTI--FSEAL-------LKMRKQYPGCLSQ 230
Query: 242 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 301
+ C+ ++ + + G+ KE ++F L+ +R L + F A+R K + K
Sbjct: 231 ETCVRAVQAAVQYPYEVGIKKEEELFMYLLESGQARALQYAFLAERNARKWSTPSGASWK 290
Query: 302 ---PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTR 358
PR + V+G G MG GI + I V+ E + + L K I + + V++
Sbjct: 291 TASPRPISSAGVVGLGTMGRGIVISLAKAKIPVIAVESDKKQLEIANKIITSALEREVSK 350
Query: 359 GKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 418
+ + + L + E DVD+VIEAV E + LK+K+F+EL C P L T
Sbjct: 351 MQQSGHPWSGPKPRLTTAM--KELSDVDLVIEAVFEEMNLKKKVFAELSAVCKPEAFLCT 408
Query: 419 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKK 478
NTS +D++ + T+ +IG HFFSPAHVM LLE++ + +S I +M + K I+K
Sbjct: 409 NTSALDVDEIASSTNRPHLVIGTHFFSPAHVMKLLEVIPSRYSSPTTIATVMNLSKKIQK 468
Query: 479 VPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYG 538
VVVGNC F NR Y L+ G ID + FG +GPF++ DLAG
Sbjct: 469 FGVVVGNCFSFVGNRMLNSYYNQTYFLLEEGSKPEEIDQVLEEFGFKLGPFRVSDLAGLD 528
Query: 539 VAAATSKEFDKAFP-----------DRSFQSPLVDLLLKSGRNGKANGKGLYTYEK--GS 585
V + K P D P+ D+L + GR G+ GKG Y Y+K G
Sbjct: 529 VGWKSRKGRGLTGPTLPPGTPARKRDNRRYCPIPDMLCELGRFGQKTGKGWYQYDKPLGK 588
Query: 586 KPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRAS 645
KPDP + + + R +I+P +++ EI+E L+ ++NE+ R+L +GI
Sbjct: 589 IHKPDPWLSKFLSQYRETYHIVPR----IISQDEILERCLYSLINEAFRILGDGIAASPE 644
Query: 646 DLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF--FKPSRFLEERATK 703
+D + G +P ++GG +F+A VG V L+K+ + + +P +L++ A++
Sbjct: 645 HIDVIYLHGYKWPRHKGGPMFYASTVGLPTVLEKLQKYYRQNPDIPQLEPCNYLKKLASQ 704
Query: 704 GIP 706
G P
Sbjct: 705 GNP 707
>gi|320164233|gb|EFW41132.1| mitochondrial trifunctional protein [Capsaspora owczarzaki ATCC
30864]
Length = 771
Score = 354 bits (908), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 256/741 (34%), Positives = 376/741 (50%), Gaps = 60/741 (8%)
Query: 5 RVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEE---ATSRDD--VKAIVLTGNGG 59
+ V DGVAI+ L +P VN+L+ + A +FE A +D+ A++++
Sbjct: 44 HIKASVNADGVAIVRLDSPKVNSLSQELSA----EFESVLSALEKDNRVSSAVLISTKKD 99
Query: 60 RFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMG 119
F G DI + A D++ + + + ++N I KPIVAA+ G LGGGLE+AM
Sbjct: 100 AFIVGADIGMLSAAKDADDLANISS-NGQNMLNRIAKSNKPIVAAIHGSCLGGGLEVAMA 158
Query: 120 CHARIAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKL 174
CH RIA PKT L LPE+ LG++PG TQRLP+LVGL A++MML K++ +++ KL
Sbjct: 159 CHYRIATVHPKTALALPEVMLGLLPGAGGTQRLPKLVGLPDALDMMLTGKNVRADKAKKL 218
Query: 175 GLIDAVVTS---------EELLKVSRLWALDIAARRKPWIRSLHRTDKLGS-------LS 218
GLIDAVV S + LK A+ A + R+ L S L+
Sbjct: 219 GLIDAVVQSMGPGIADPIDNTLKNLEREAVIAAKALAAGKLKVDRSVPLLSVKGITKYLT 278
Query: 219 EARE-----VLKLARLQA-KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVM 272
E E VL+ AR KKT N P A +DV+ G+ G +G+ EAK F +L M
Sbjct: 279 EEVEYGRNFVLQKARETVLKKTQGNYPAPLAIIDVVRAGLAGGFTNGLQAEAKAFGKLGM 338
Query: 273 LDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVV 332
D S+ L+ ++F Q A K G R + VAV+G GLMG+GIA I N V+
Sbjct: 339 TDESKALIGLYFGQTALKK----NRYGAPERPTQNVAVLGAGLMGAGIAQVSIEKNYNVI 394
Query: 333 LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAV 392
LK++ E L +G I N+ G V R LT + + + + L Y F +VDMVIEAV
Sbjct: 395 LKDMKPEGLARGQAQIYKNLDGKVKRKSLTSFERDQLVARVSPQLTYQNFGEVDMVIEAV 454
Query: 393 IESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPL 452
E + LKQ+I ++E PPH I A+NTS + + + + +S D++IG H+FSP MPL
Sbjct: 455 FEDLALKQRIIKDVEAVLPPHAIFASNTSALPIGEIAKASSRPDKVIGMHYFSPVDKMPL 514
Query: 453 LEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDV 512
LEI+ T++TS + + VG K +VV + GF R P A ++ G+D
Sbjct: 515 LEIITTDKTSKETAAAAVQVGLKQGKTVIVVKDGPGFYTTRILAPMLAEAITTLTEGIDF 574
Query: 513 FRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVD---LLLKS-- 567
F +D ++ +G P+G L D G V S + AF R P + L+LK
Sbjct: 575 FHLDKVMQKYGFPVGSVTLADEVGIDVGYHVSHDLGAAFKHR--MGPGAERAALVLKEMV 632
Query: 568 GRN--GKANGKGLYTY--EKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEM 623
+N G+ +GKG Y + KG + + I + + P +V ++E+
Sbjct: 633 DKNFLGRKSGKGCYIWSERKGKGKVINEDAVAIFRKYQT--------GPFTVPDEEVAFR 684
Query: 624 ILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKW 683
+ + NE+ L+EGI+ D D +V G+ FP +GG W D+ GA L++
Sbjct: 685 LTGRMTNEAVYCLQEGILSSPVDGDIGAVFGLGFPPNKGGPFRWIDSYGAKNFVNRLEQL 744
Query: 684 SQLYGNFFKPSRFLEERATKG 704
+ YG+ F P+ L E A G
Sbjct: 745 ATKYGDHFAPAPLLIEHAKNG 765
>gi|387903389|ref|YP_006333728.1| enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase / 3-hydroxyacyl-CoA dehydrogenase /
3-hydroxybutyryl-CoA epimerase [Burkholderia sp. KJ006]
gi|387578281|gb|AFJ86997.1| Enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase / 3-hydroxyacyl-CoA dehydrogenase /
3-hydroxybutyryl-CoA epimerase [Burkholderia sp. KJ006]
Length = 711
Score = 354 bits (908), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 241/699 (34%), Positives = 363/699 (51%), Gaps = 23/699 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D + ++T+ +PPVNAL+ + GL D + A + V+A+++ G G F G DI F
Sbjct: 20 RDALLVVTIDHPPVNALSADVRRGLADALDAAQADHAVRAVLIVGAGRNFIAGADIREFG 79
Query: 72 KVHGAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKT 129
K P V L V IE KP+V A+ G LGGGLE+A+ H R+A P
Sbjct: 80 K----------PPVPPSLPDVCERIESSAKPVVVALHGATLGGGLEVALAAHYRLALPGA 129
Query: 130 QLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL 186
+LGLPE+TLG++PG TQR PRL+G A+++ML + ++EE LGL+D V S++
Sbjct: 130 KLGLPEVTLGLLPGAGGTQRTPRLIGAKAALDLMLTGRHASAEEARALGLVDRVARSDQT 189
Query: 187 LKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLD 246
L +A ++ + P +R L + A+ L AR + K + + +D
Sbjct: 190 LAEGLAYAQELVSLGAP-VRRTRDAQGLAERTAAQAALAAARAELPKKSRGLFSPAKIVD 248
Query: 247 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 306
+E + +G+ E +F + + GLVH FFA+R +K P R V
Sbjct: 249 AVEAALTLSFDAGMKLERSLFLQCLDSPQRAGLVHAFFAEREAAKAPEARRA--SARAVE 306
Query: 307 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 366
+V V+GGG MG+GIA A + + V + E + L +G +E LV +G++T D
Sbjct: 307 RVGVVGGGTMGAGIAVAALDAGLPVTMIERDDASLARGRAHVEKVYDALVAKGRMTPDAR 366
Query: 367 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 426
+ G Y D+VIEAV E + +KQ +F+EL + C P +LATNTS +D++
Sbjct: 367 AARVARFDGSTRYDALAQADVVIEAVFEDMAVKQAVFAELARVCKPGAVLATNTSYLDID 426
Query: 427 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 486
+ +IG HFFSPA+VM LLEIV +R SA+V+ + + +KK PV G C
Sbjct: 427 ALAAGIDRPADVIGLHFFSPANVMKLLEIVVPKRVSAEVVATAFALARQLKKTPVRAGVC 486
Query: 487 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKE 546
GF NR Y +A L+ G ++ID A+R FG P+GPFQ++DLAG + AT K
Sbjct: 487 DGFIGNRILAVYRTAADYLMEDGASPYQIDRAVRDFGFPMGPFQVVDLAGGDIGWATRKR 546
Query: 547 FDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSN 605
R+ + D L + G G+ +G+G Y Y G++ PDP V I+ R
Sbjct: 547 RAATRDPRARYVEISDRLCERGWFGQKSGRGYYLYPDGARVGTPDPEVDAIVAAERAKKG 606
Query: 606 IMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIV 665
I+P S ++ EI+ L ++NE V+ E I +R D+D + G FP +RGG +
Sbjct: 607 IVPR----SFSDDEILRRYLAAMINEGANVVHERIALRPLDVDAVFLYGYGFPRHRGGPM 662
Query: 666 FWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+AD VG V ++ ++ F++PS L E +G
Sbjct: 663 HYADTVGLANVLADIRAFANEDPLFWRPSPLLVELVERG 701
>gi|57110042|ref|XP_545234.1| PREDICTED: peroxisomal bifunctional enzyme [Canis lupus familiaris]
Length = 723
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 248/724 (34%), Positives = 389/724 (53%), Gaps = 59/724 (8%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A+I L NPPVNA++ ++ G+KD ++AT+ VKAIVL G G+FS G DI+ F +
Sbjct: 11 LALIRLRNPPVNAISTAVLRGIKDGLQKATTDRTVKAIVLCGADGKFSAGADIHSFGEPR 70
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
+ D + +V+ I+ +KP+VAA++GLALGGGLELA+GCH RIA + Q+G P
Sbjct: 71 KS-------DFVLGHIVDEIQRTEKPVVAAIQGLALGGGLELALGCHYRIAHAEAQIGFP 123
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS---EELLK 188
E+TLG++PG TQ LPRL+G+ A++++ + + ++E KLG++D +V S EE +K
Sbjct: 124 EVTLGILPGARGTQLLPRLIGVPAALDLITSGRHVLADEALKLGILDEIVNSDPVEEAIK 183
Query: 189 VS-RLWALDIAARR---KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 244
++ R+ + +RR KP + SL + A L+ +K P + C
Sbjct: 184 LAQRISDQSLESRRLCNKP----------IQSLPNMESIFSEALLKMQKQHPGCLAPETC 233
Query: 245 LDVIEEGIVHGGYS-GVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK-- 301
+ ++ VH Y G+ KE ++F L +R L + FFA+R +K + K
Sbjct: 234 VRAVQAA-VHCPYEVGIQKEKELFMYLQKSGQARALQYAFFAERNATKWSTPSGASWKTA 292
Query: 302 -PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGK 360
+ + V V+G G MG GI + I V+ E + K ++T + + L+ +
Sbjct: 293 IAQPISSVGVVGLGTMGRGIVVSLAKAKIPVIAVESDK----KQLETADMIITTLLEKEA 348
Query: 361 LTQDKANNALKMLKGVLDYS--EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 418
++++ K L S E VD+VIEAV E + LK+++F+EL C P L T
Sbjct: 349 SKMQRSSHPSLGPKPRLTTSMKELGGVDLVIEAVFEEINLKKRVFAELSAICKPEAFLCT 408
Query: 419 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKK 478
NTS +D++ + T +IG HFFSPAHVM LLEI+ ++ +S I +M + K IKK
Sbjct: 409 NTSALDIDEIASSTDRPHLVIGTHFFSPAHVMKLLEIIPSQYSSPTTIATVMNLSKKIKK 468
Query: 479 VPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYG 538
+ VVVGNC GF NR PY L+ G ID + FG +GPF++ DLAG
Sbjct: 469 IGVVVGNCFGFVGNRMLKPYYNQTYFLLEEGSRPEEIDQVLEEFGFKMGPFRVSDLAGLD 528
Query: 539 VAAATSKEFDKAFP------------DRSFQSPLVDLLLKSGRNGKANGKGLYTYEK--G 584
V + + P +R + P+ DLL +SGR G+ GKG Y Y+K G
Sbjct: 529 VGWKSRQGQGLTGPMVPSGTPARKRGNRRY-CPIPDLLCESGRFGQKTGKGWYQYDKPLG 587
Query: 585 SKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRA 644
KPDP + + + R+ +I +P +++ EI+E L+ ++NE+ R+L EG+
Sbjct: 588 RIHKPDPWLSEFLSQYRKTYHI----EPRIISQDEILERCLYSLINEAFRILGEGMATDP 643
Query: 645 SDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF--FKPSRFLEERAT 702
+D + G +P +RGG +F+A VG V L+K+ + + +P +L++ A+
Sbjct: 644 EHIDVVYLHGYGWPRHRGGPMFYASTVGLPTVLEKLQKYYRQNPDIPQLEPCDYLKKLAS 703
Query: 703 KGIP 706
G P
Sbjct: 704 LGNP 707
>gi|384101667|ref|ZP_10002704.1| 3-hydroxyacyl-CoA dehydrogenase [Rhodococcus imtechensis RKJ300]
gi|383840812|gb|EID80109.1| 3-hydroxyacyl-CoA dehydrogenase [Rhodococcus imtechensis RKJ300]
Length = 687
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 232/684 (33%), Positives = 349/684 (51%), Gaps = 30/684 (4%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D V ++T+ NPPVNA + + AGL E A + DDV AIVL G F G D+ F
Sbjct: 20 EDRVGVLTIDNPPVNASSAAVRAGLMSGLEVAEADDDVDAIVLIGASANFVSGSDLREF- 78
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+G V P+ + V+ IE KP+VAA+ G LGGG ELA+GC RIA +
Sbjct: 79 ----SGPV---PEPQLPSVIAAIEASAKPVVAALSGATLGGGFELALGCDGRIALAGGVV 131
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
GLPE+ LG+IPG TQR RLVG ++ +E++ + + E+ + GLID VVT +
Sbjct: 132 GLPEIPLGMIPGAGGTQRPMRLVGPARTLELVTSGERLPVEQAHREGLIDEVVTGSPRAQ 191
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 248
R A R K +R+L ++ EV ++A +++A PQ A + I
Sbjct: 192 AIRFAR---ALRGKRILRNLPVRG-----ADPGEVEQVATTALRRSA--RPQTVAAVGAI 241
Query: 249 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 308
G E F L S L H+FFA+RA K PR ++ V
Sbjct: 242 LMGGSAPADRAFQHERAEFNRLRNGTESSALRHLFFARRAALKANRPA----LPRELKSV 297
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
V+G G MG+GIA A + + VVL + + + ++ +G+VTRG+LT+ A +
Sbjct: 298 GVVGAGTMGAGIARAFVEAGVPVVLVDQQRQAAAAAAERLQRTYQGMVTRGRLTESDAQH 357
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
L +L + ++ D+VIEAV E + +KQ + +LE PH LATNTS +D+N +
Sbjct: 358 HLSLLTAGTTIRDLEETDLVIEAVYEDLEVKQTVLRQLEAVLRPHVPLATNTSYLDVNEI 417
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
+ R++G HFFSPAH +LEIVR E+TS + + +T K+++K+P++ G C G
Sbjct: 418 AAAVARPTRVLGMHFFSPAHRAAVLEIVRGEKTSTEALDVALTAAKVLEKMPILAGVCDG 477
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR + Y + L++ G ++D+A+ FG +GPF + D++G +A K
Sbjct: 478 FIGNRIYNAYRRQCELMLEEGALPQQVDAALTEFGFAMGPFAVSDMSGLDIAWRMRKSKA 537
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIM 607
A R + D L + GR G+ G G Y +E GS+ P PD +V +IE+ + I
Sbjct: 538 GARDPRERYPDVADALCELGRFGQKTGDGWYHFEPGSRTPHPDSTVEALIEQSSQRKAIT 597
Query: 608 PGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFW 667
+ T ++IV L + NE+ +L + I R SD+D LG FP++ GGI W
Sbjct: 598 RA----AFTSQDIVTRALVTMANEAALLLADKIADRPSDIDLMLTLGYGFPTHEGGITHW 653
Query: 668 ADAVGANYVYTSLKKWSQLYGNFF 691
++ L + G+ F
Sbjct: 654 VGRQDRRFLEHELDALAARTGHGF 677
>gi|410647349|ref|ZP_11357783.1| peroxisomal bifunctional enzyme [Glaciecola agarilytica NO2]
gi|410133052|dbj|GAC06182.1| peroxisomal bifunctional enzyme [Glaciecola agarilytica NO2]
Length = 656
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 227/673 (33%), Positives = 365/673 (54%), Gaps = 36/673 (5%)
Query: 43 ATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIV 102
A + ++ IVL G F G DI F K +P V EL ++ KPIV
Sbjct: 4 ALANPEIDGIVLQCLGKTFIAGADILEFGK---PPQPPHLPSVLSEL-----QNSPKPIV 55
Query: 103 AAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEM 159
AA+ G LGGG E A+ CH R+A T++GLPE+ LG+IPG TQ LPR+ + AIE+
Sbjct: 56 AALFGTVLGGGFETALSCHYRVALTGTKVGLPEVNLGLIPGAGGTQLLPRVCEVESAIEL 115
Query: 160 MLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSE 219
+ K I G++D +V+ + +LK +A +A + +P I + K+G +
Sbjct: 116 ITSGKHIDIASPQAKGIVDKIVSDDLVLKTIE-FAQQVALK-QPVIATPLLNVKMGEAED 173
Query: 220 ---AREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 276
A+ KLA+ + AP Q+ +D IE + G+ KE + F S
Sbjct: 174 TIFAQYRAKLAKRARGQQAP-----QSAIDSIENALNLPFNQGLKKEREYFLSCRESTES 228
Query: 277 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 336
+ H FFA++A K P + ++P + ++A+IG G MG GIA + + V+L E
Sbjct: 229 AAMRHAFFAEKAAVKYPATLN-KIEPLHIEQIAIIGAGTMGGGIAMSFLDRGYPVILVET 287
Query: 337 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 396
+ E L +G I + +V +++Q++ + LKM+K Y + DVD+VIEA ES+
Sbjct: 288 SEENLARGTSGITERYKKMVLSKRISQEQMDIRLKMMKATCCYDDLHDVDLVIEAAFESM 347
Query: 397 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 456
+K++IF +L+ C P ILA+NTS +D+ + E T+ ++++G HFFSPA++M LLEIV
Sbjct: 348 EVKREIFRKLDAVCKPQTILASNTSYLDIEEIAESTARPEKVLGMHFFSPANIMKLLEIV 407
Query: 457 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 516
R + TS ++ + + K I K+ VVG C GF NR + Y + A L+ G +ID
Sbjct: 408 RCKETSETTLISAVALAKHIGKISSVVGMCYGFVGNRMYSCYGREANSLLLEGATPSQID 467
Query: 517 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPL----VDLLLKSGRNGK 572
A+ +G+ +GP + D++G +A KE P+ S ++PL +L++++GR G+
Sbjct: 468 QAMVDWGMAMGPLAVNDMSGIDIAYNARKE----NPNLS-KNPLYFHAANLMVEAGRLGQ 522
Query: 573 ANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNES 632
KG Y Y++ DP+ L I ++ +L I +++ I E +++ ++NE
Sbjct: 523 KTQKGFYQYDEAGVKSEDPAALAIFQQEAKLHGI----PQQEISQAHIQERLIYALINEG 578
Query: 633 CRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYG-NFF 691
++LEE I +ASD+D + G FP YRGG +F+AD +G + V S++++ Q+ G ++
Sbjct: 579 AKILEESIAKQASDIDVIWLNGYGFPRYRGGPMFYADTIGLDKVLESIQQFYQVTGKEWW 638
Query: 692 KPSRFLEERATKG 704
KPS L E A G
Sbjct: 639 KPSPLLVELAHAG 651
>gi|377808341|ref|YP_004979533.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Burkholderia sp. YI23]
gi|357939538|gb|AET93095.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Burkholderia sp. YI23]
Length = 708
Score = 353 bits (907), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 238/700 (34%), Positives = 366/700 (52%), Gaps = 29/700 (4%)
Query: 14 GVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKV 73
GV ++T+ + PVNA+ + GL D + A + +A+++ G G F G DI F
Sbjct: 19 GVLVVTIDHAPVNAINAAVRRGLIDAIDAADANPSARAVLIVGAGRGFIAGADIREF--- 75
Query: 74 HGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGL 133
G +L P S+ V N IE C KP++AA+ G ALGGGLE+A+ H RIA +LGL
Sbjct: 76 ---GKPALPP--SLPDVCNRIEACGKPVIAAIHGAALGGGLEVALASHYRIAVEGAKLGL 130
Query: 134 PELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAV-----VTSEE 185
PE+ LG++PG TQR RL+G A+ +ML + + ++E +LGL+D V V +E
Sbjct: 131 PEVQLGLLPGAGGTQRSARLIGAQAALSLMLSGRHVGAQEALRLGLVDRVGQSDDVFNEG 190
Query: 186 LLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACL 245
L L A A RR R L D + AR + +K + + +
Sbjct: 191 LAYAHELIATQAAPRRTKNARGLADEDASVAAI------AAARAETQKKSRGLLSPLKIV 244
Query: 246 DVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGV 305
D +E + G+ E + F E GLVH FFA+R T K P D K R +
Sbjct: 245 DCVEAALNLPFDEGLRFERERFLECRESPQRAGLVHAFFAERETQKSPETRDA--KAREI 302
Query: 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDK 365
R V V+GGG MG+GIA A + + V + E + L +G +E L+ + ++T +
Sbjct: 303 RAVGVVGGGTMGAGIAVALLDAGLAVTMIERDDASLERGRAHVEKVYDALIAKERITPET 362
Query: 366 ANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL 425
AL+ L G Y D D+VIEAV E + +KQ +F+EL++ C P +LATNTS +D+
Sbjct: 363 KTRALQRLNGATHYDALADADLVIEAVFEDMAVKQAVFAELDRVCKPGAVLATNTSYLDI 422
Query: 426 NIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 485
+ + S ++G HFFSPA++M LLE+V +R +A V+ + K ++KV V G
Sbjct: 423 DEIAVSISRPQDVLGLHFFSPANIMKLLEVVVPKRVAADVVATGFELAKKLRKVAVRAGV 482
Query: 486 CTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSK 545
C GF NR Y +A L+ G ++ID+A+R FG P+GP+Q++DLAG + A K
Sbjct: 483 CDGFIGNRMLAVYRAAADHLMEDGASPYQIDAAVRDFGFPMGPYQVIDLAGGDIGWAARK 542
Query: 546 EFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKP-KPDPSVLPIIEECRRLS 604
+ + D L + G G+ +G+G Y YE G++ KPD V II+ R +
Sbjct: 543 RRAATRDPNARYVRIGDELCERGWFGQKSGRGYYRYENGARSGKPDAEVEAIIDTERARA 602
Query: 605 NIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGI 664
+ P + ++ EIV + ++NE ++ EGI R D+D V G FP +RGG
Sbjct: 603 GVTPR----TFSDDEIVRRYMAAMINEGANIVHEGIAQRPLDVDATLVHGFGFPRHRGGP 658
Query: 665 VFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+ +AD++G V ++ +++ F++ S + + +G
Sbjct: 659 MHYADSIGLANVLDDIRAFAKEDPLFWRASPLIVDLVARG 698
>gi|256823193|ref|YP_003147156.1| fatty acid oxidation complex subunit alpha FadJ [Kangiella
koreensis DSM 16069]
gi|256796732|gb|ACV27388.1| fatty acid oxidation complex, alpha subunit FadJ [Kangiella
koreensis DSM 16069]
Length = 715
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 257/729 (35%), Positives = 382/729 (52%), Gaps = 57/729 (7%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSR------DDVKA--- 51
M+ +E+ +DG+A+IT I+ P A + LK +F E DD+
Sbjct: 1 MSESIFELEMQDDGIAVIT-IDLPGEAQNV-----LKPEFGEQVGEILEKLSDDISVKGV 54
Query: 52 IVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALG 111
I+ +G G F G DI+V + A + L L E K PIVAA++G LG
Sbjct: 55 IIRSGKEGSFIAGADISVLKSADTAQQAEEIAKTGQRLFAQL-EKFKVPIVAAIDGACLG 113
Query: 112 GGLELAMGCHARIAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSI 166
GGLELA+ CH R+ + PK++LGLPE+ LG++PG TQRLPRLVG+ A++MML K +
Sbjct: 114 GGLELALACHGRVVSDSPKSKLGLPEVQLGLLPGSGGTQRLPRLVGIPSALDMMLTGKQL 173
Query: 167 TSEEGWKLGLIDAVVTSEELLKVS--RLWAL-DIAARRKPWIRSLHRTDKLGSLSEAREV 223
++ KLGL+D VV + L+K + RL L +++KPW L SL+ +E+
Sbjct: 174 FPKQAKKLGLVDEVVPAANLMKAAYRRLHELRKDRSKKKPWTYYL-------SLAGIKEL 226
Query: 224 L--------KLARLQAKKTAP-----NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKEL 270
L L QA+KT N P ++ +E+G G +G+ EAK F +L
Sbjct: 227 LLEANPLGRNLVFNQARKTVDSKTKGNYPAPHKIIECVEKGYSQGFDAGLAIEAKNFGQL 286
Query: 271 VMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NI 329
V+ ++ L+ +FFA K V D ++ V KV V+GGGLMGSGIA +
Sbjct: 287 VVTPEAKALISIFFATTELKKDKGV-DGDVEAITVDKVGVLGGGLMGSGIAYVSVDKAGK 345
Query: 330 YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVI 389
V +K+V+++ + + + + R ++ A NA+ L G DY FKD DMVI
Sbjct: 346 QVRVKDVSAKGVNGALNYSWKIISKKMKRRIISPSDARNAMSFLTGSTDYKGFKDCDMVI 405
Query: 390 EAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHV 449
EAV E + LK ++ ++E+ C I ATNTS+I ++ + E + ++G H+FSP
Sbjct: 406 EAVFEDLDLKHQMVKDVEENCSEKTIFATNTSSIPISKIAEGAKRPEHVVGLHYFSPVEK 465
Query: 450 MPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLG 509
MPLLEI++T++T+ VI + +GK K P+VV + GF VNR PY A +L+S G
Sbjct: 466 MPLLEIIKTDKTADWVIATCVALGKQQGKTPIVVNDGAGFYVNRILAPYVNEAGILLSEG 525
Query: 510 VDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGR 569
V + ++D A+ G P+GP LLD G VA + AF +R LL R
Sbjct: 526 VAIEKLDKAMVKAGFPVGPITLLDEVGIDVATKVAPILQDAFGERMEPPKAFSKLLDDDR 585
Query: 570 NGKANGKGLYTY-EKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPV 628
G+ N +G Y Y KG K + D SV R+ + PG + V+ EI E + +
Sbjct: 586 KGRKNNRGFYQYPAKGKKKQVDESVY-------RVLGVEPGKE---VSSAEIAERGMLLM 635
Query: 629 VNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYG 688
NE+ R L+EG++ A D D ++ G+ FP ++GG + D G V L+ + +LYG
Sbjct: 636 ANEAARCLDEGVIRSARDGDVGAIFGIGFPPFQGGPFRYMDKRGIATVVDRLEHYQELYG 695
Query: 689 NFFKPSRFL 697
FKP+ L
Sbjct: 696 ARFKPADVL 704
>gi|419960863|ref|ZP_14476875.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Rhodococcus
opacus M213]
gi|414573746|gb|EKT84427.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Rhodococcus
opacus M213]
Length = 687
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 234/684 (34%), Positives = 348/684 (50%), Gaps = 30/684 (4%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D V ++T+ NPPVNA + + AGL E A + DDV AIVL G F G D+ F
Sbjct: 20 EDRVGVLTIDNPPVNASSAAVRAGLMSGLEVAEADDDVDAIVLIGASANFVSGSDLREF- 78
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+G V P+ + V+ IE KP+VAA+ G LGGG ELA+GC RIA +
Sbjct: 79 ----SGPV---PEPQLPSVIAAIEASAKPVVAALSGATLGGGFELALGCDGRIALAGGVV 131
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
GLPE+TLG+IPG TQR RLVG ++ +E++ + + E+ + GLID VVT +
Sbjct: 132 GLPEITLGMIPGAGGTQRPLRLVGPARTLELVTSGERLPVEQAHREGLIDEVVTGSLRAQ 191
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 248
R A R K +R+L ++ EV ++A ++ A PQ A + I
Sbjct: 192 AIRFAR---ALRGKRILRNLPVRG-----ADPGEVEQVATTALRRAA--RPQTVAAVGAI 241
Query: 249 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 308
G E F L S L H+FFA+RA K PR ++ V
Sbjct: 242 LMGGSAPADRAFQHERAEFNRLRNGTESSALRHLFFARRAALKANRPA----LPRELKSV 297
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
V+G G MG+GIA A + + VVL + + + ++ +G+VTRG+LT+ A +
Sbjct: 298 GVVGAGTMGAGIARAFVEAGVPVVLVDQQRQAAAAAAERLQHTYQGMVTRGRLTESDAQH 357
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
L +L + ++ D+VIEAV E + +KQ + +LE P H LATNTS +D+N +
Sbjct: 358 HLSLLTAGTTIRDLEETDLVIEAVYEDLEVKQTVLRQLEAVLPTHVPLATNTSYLDVNEI 417
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
+ R++G HFFSPAH +LEIVR E+TS + + +T K+++K+P++ G C G
Sbjct: 418 AAAVARPTRVLGMHFFSPAHRAAVLEIVRGEKTSTEALDVALTAAKVLEKMPILAGVCDG 477
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR + Y + L++ G ++D+A+ FG +GPF + D++G +A K
Sbjct: 478 FIGNRIYNAYRRQCELMLEEGALPQQVDAALTEFGFAMGPFAVSDMSGLDIAWRMRKSKA 537
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIM 607
A R + D L + GR G+ G G Y YE GS+ P PD +V +IE+ + I
Sbjct: 538 GARDPRERYPDVADALCELGRFGQKTGDGWYHYEPGSRTPHPDRTVEALIEQSSQRKAIT 597
Query: 608 PGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFW 667
+ T + IV L + NE+ +L + I R SD+D LG FP++ GGI W
Sbjct: 598 RA----AFTSQGIVTRALVTMANEAALLLVDTIADRPSDIDLMLTLGYGFPTHEGGITHW 653
Query: 668 ADAVGANYVYTSLKKWSQLYGNFF 691
++ L + G+ F
Sbjct: 654 VGRQDRRFLEHELDALAARTGHGF 677
>gi|153006999|ref|YP_001381324.1| multifunctional fatty acid oxidation complex subunit alpha
[Anaeromyxobacter sp. Fw109-5]
gi|152030572|gb|ABS28340.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Anaeromyxobacter sp.
Fw109-5]
Length = 723
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 253/716 (35%), Positives = 383/716 (53%), Gaps = 36/716 (5%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVF 70
DGVA + L P VN + V + D VK +V T F G I++
Sbjct: 21 DGVATLFLDEPGESVNVVEPGAVEEFFRLLDGFAGDDAVKGVVFTSGKDGFIAGAKIDLI 80
Query: 71 QKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA--PK 128
Q V A + + ++ ++ +E +KP+VAA++G ALGGGLE A+ CH RIA PK
Sbjct: 81 QSVTDAAEAEQLAR-EMQAGLDRLERYRKPVVAAIQGSALGGGLEWALACHYRIATSDPK 139
Query: 129 TQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEE 185
TQLGLPE+ LG+IPG TQRLPRLVG+ A++++L K++ +++ K+GL+D VV S+
Sbjct: 140 TQLGLPEVQLGLIPGAGGTQRLPRLVGIQTALDLILAGKTVKAKKALKIGLVDEVVPSQL 199
Query: 186 LLKVSRLWALDIAA---RRKPWIRS--LHRTDKLGSLSEAREVLKLARLQAKK-----TA 235
L+ V+R AL +A RR+P ++ + R ++ +L E R +L QA+K T
Sbjct: 200 LVSVARQRALALATGKLRREPRRKASPVERATRV-ALEENRVGRELLFRQARKAVLAKTK 258
Query: 236 PNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV 295
P L+ IE G G G+ KEA++F +L + + +R L+ +FFA A K V
Sbjct: 259 GMYPAPVRALEAIEYGYQKGFAKGLEKEAQLFGQLAVSEVARRLMEIFFATTALKKDTGV 318
Query: 296 TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGL 355
D ++PR R+V V+GGGLMGSGI+ I V ++E + K + ++ A +
Sbjct: 319 DDPAVRPRPARRVGVLGGGLMGSGISFVTANAGIPVRIRERDDAAAGKALGSVRALLDER 378
Query: 356 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCI 415
V R + + + + ++++ D+S + VD++IEAV E + LKQ++ E A P I
Sbjct: 379 VKRRSIDRLERDERMRLVTATTDWSGYAAVDVLIEAVFEDLALKQEMVRAFE-AVNPTGI 437
Query: 416 LATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKI 475
A+NTS+I + + E ++ + ++G H+FSP MPLLEI+ TE+TS + + +GK
Sbjct: 438 FASNTSSIPITKIAEASAHPETVLGMHYFSPVQKMPLLEIIVTEKTSKEATATAVALGKK 497
Query: 476 IKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLA 535
K +VVG+ GF +R PY A L+ G V +D A+ FG P+GP LLD
Sbjct: 498 QGKTVIVVGDGPGFYTSRILAPYMNEAAELLVEGAAVEDLDRALVEFGFPVGPITLLDEV 557
Query: 536 GYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKP-DPSVL 594
G V K AF R + ++K+GR G+ N KG YTY + K K D +V
Sbjct: 558 GIDVGEKVGKILHDAFGARMASPAALHDVVKAGRLGRKNRKGFYTYGEDKKEKRVDVTVY 617
Query: 595 PIIEECRRLSNIMPGG---KPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDAS 651
+++PGG KP + EI E ++ +VNE+ R L EGI+ A D D +
Sbjct: 618 ----------DLLPGGRSRKPFA--HDEIRERVVLQMVNEAIRCLGEGILRSARDGDVGA 665
Query: 652 VLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPL 707
V G+ FP +RGG +AD +G + L++ +G F P+ L E A G P
Sbjct: 666 VFGLGFPPFRGGPFRYADKLGPKELLARLERLRARHGERFAPAPLLVEHAAAGRPF 721
>gi|213511462|ref|NP_001133776.1| Peroxisomal bifunctional enzyme [Salmo salar]
gi|209155296|gb|ACI33880.1| Peroxisomal bifunctional enzyme [Salmo salar]
Length = 716
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 249/729 (34%), Positives = 368/729 (50%), Gaps = 78/729 (10%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA+ITL NPPVNAL+ + G+ D + A V ++V+ G G+F GG DI F
Sbjct: 11 VALITLHNPPVNALSAAVRQGIVDAVQRALKDPKVTSVVICGQNGKFCGGADIREF---- 66
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
AG + P V + ++ IE KP+ AA+EG+ALGGGLELA+ CH RIA K LGLP
Sbjct: 67 -AGPMLGPPLVPM---IHAIEAVDKPVAAAIEGVALGGGLELALACHYRIAHSKAVLGLP 122
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE------E 185
E+TLG++PG +QRLPRL+GL+ A++++ + +++ E KLG++D V S E
Sbjct: 123 EVTLGLLPGAGGSQRLPRLIGLTAALDLITTGRHVSAAEALKLGVLDQVTDSNAVDLAVE 182
Query: 186 LLKVSRLWALDIAARR--------KPWIRSLHRTDKLGSLSEARE---VLKLARLQAKKT 234
++ LD +RR P + SL DK+ S R + +A ++A +
Sbjct: 183 FVRSVAGQPLD--SRRLSTLPCPCPPDVDSL--LDKVMSKVRQRSRGALAPVACVRALRA 238
Query: 235 APNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK--V 292
A ++P Q G+ KE ++ L +R L + FF+QR K +
Sbjct: 239 AASLPYAQ----------------GMEKERELMATLFNSGQARALQYAFFSQRVVGKWSL 282
Query: 293 PNVTDI-GLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEAN 351
P+ R + K AVIG G MG GI A L I VV E + L + + + A
Sbjct: 283 PSGARWDNSTARIISKAAVIGLGTMGRGIVVALALTGISVVAVETQEKQLAEASRVVPA- 341
Query: 352 VRGLVTRGKLTQDKANNALKMLKGVLDYS----EFKDVDMVIEAVIESVPLKQKIFSELE 407
L ++ L GV+ +S + +V++VIEAV E + LK ++F L
Sbjct: 342 --------MLQREAGRRRLATPPGVISFSSNLQDVSEVELVIEAVFEDMSLKLQVFKHLS 393
Query: 408 KACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVIL 467
C P +L +NTS +D++ + T S ++G HFF+PAHVM LLE+V R+S + +
Sbjct: 394 SVCRPGTLLCSNTSGLDIDQLAAVTQSPGLVVGMHFFAPAHVMKLLEVVYGPRSSPEAVA 453
Query: 468 DLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIG 527
M +GK + KV V VGNC GF NR PY + A L+ G ++D A+ FG P+G
Sbjct: 454 TAMQLGKRMGKVGVAVGNCPGFVGNRMLKPYLEQANFLLEEGATPRQVDEALEEFGFPMG 513
Query: 528 PFQLLDLAGYGVAAATSKEFDKAFP----DRSFQ----SPLVDLLLKSGRNGKANGKGLY 579
F++ DL+G V KE P R+ Q SPL D + ++GR G+ GKG Y
Sbjct: 514 VFRMSDLSGLDVGWRIRKEAGLTGPGVESTRTRQGRRYSPLPDQMCEAGRLGQKTGKGWY 573
Query: 580 TYE--KGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 637
Y+ G + DP V +E R ++ S+T +EI+E L+ ++NE +L+
Sbjct: 574 QYDGPGGRVARSDPWVHIFLETYRAEHGLV----ARSITLEEILERCLYALINEGFNILQ 629
Query: 638 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 697
+ + D+D V G +P +RGG +F AD VG + L + S KPS L
Sbjct: 630 DAVAAGPEDIDAIYVFGYGWPRHRGGPMFHADQVGLGRILQRLNQHSHPDVPHLKPSTLL 689
Query: 698 EERATKGIP 706
G P
Sbjct: 690 RRLVAAGSP 698
>gi|378827047|ref|YP_005189779.1| protein PimF [Sinorhizobium fredii HH103]
gi|365180099|emb|CCE96954.1| pimF [Sinorhizobium fredii HH103]
Length = 686
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 236/670 (35%), Positives = 351/670 (52%), Gaps = 28/670 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA++T+ NPPVNAL+ + GL D E + VKA+VLT G F G D+ F K
Sbjct: 11 VAVVTIDNPPVNALSQAVRQGLLDAVEALDAEASVKAVVLTCAGRTFIAGADVGEFGK-- 68
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
MP +LV IE +KP VAA+ G ALGGG E+A+GC R+A +GLP
Sbjct: 69 -----PPMPPHLPDLVAR-IERARKPWVAAIHGSALGGGFEVALGCRFRVAVASASVGLP 122
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 191
E+ LG++PG T RLPRL G+ A++M+ I + + GL+DAV+ ++L+ +
Sbjct: 123 EVRLGLVPGAGGTVRLPRLAGVETAVDMVTTGAPIGARTACEAGLVDAVI-EDDLVAGAV 181
Query: 192 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 251
+A + R +P +L + E K + AC+ E
Sbjct: 182 AFARTV--RDRPLPDALRDRPVAAPPAGFWEAAAKTTAARAKREEAPLRALACVRRAAET 239
Query: 252 IVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVI 311
+ + E + F L + L HVFFA+RA ++ P + G+ PR +R AVI
Sbjct: 240 DFE---TAIAFERETFLALRGSAQAAALRHVFFAERAATRPPELA--GITPRTIRSAAVI 294
Query: 312 GGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALK 371
GGG MG+GIA A + VVL E + + +G+ + A G RG+++ + A +
Sbjct: 295 GGGTMGAGIAAALSDAGLPVVLVERDDGAVERGLANLRAIFDGAAKRGRISIEVAAERMA 354
Query: 372 MLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEK 431
+ G DY+ D+D+VIEAV E + +K+ +F L AC +LATNTS +D + E
Sbjct: 355 GVIGTTDYAALADIDLVIEAVFEDLDVKRDVFRRLAAACRDDAVLATNTSYLDPERIAEG 414
Query: 432 TSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAV 491
S DR +G HFFSPA VM LLEIV ++ T+ +V+ + +++ K+PV G C GF
Sbjct: 415 ISRPDRFLGLHFFSPAQVMKLLEIVPSKATAPEVVAASFGLARMLNKIPVRAGICDGFIG 474
Query: 492 NRAF-FPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKA 550
NR +Q+ RLL++ G +D+A+R+FGLP+GPF+ DL G +AA K +A
Sbjct: 475 NRILKVTRAQAERLLLA-GATPAAVDAAMRAFGLPMGPFEAQDLGGLDIAAFQRKAA-RA 532
Query: 551 FPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGG 610
+ F +P+ D L + R G+ +G G Y YE G + P PS N
Sbjct: 533 RGETPF-APVADRLSAAQRFGQKSGGGWYDYEPGDR-TPRPSDAVAAIIAEEAKNW---- 586
Query: 611 KPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADA 670
+ + I + IL+P+VNE R+L +G +RASD+D + G FP +RGG + +A A
Sbjct: 587 PRLEWHQDAIADCILWPMVNEGARILADGTALRASDIDLVKIHGYGFPRWRGGPMHYAQA 646
Query: 671 VGANYVYTSL 680
G + V +L
Sbjct: 647 HGLDKVVDAL 656
>gi|330818421|ref|YP_004362126.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia gladioli BSR3]
gi|327370814|gb|AEA62170.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein [Burkholderia
gladioli BSR3]
Length = 712
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 242/702 (34%), Positives = 379/702 (53%), Gaps = 28/702 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D V ++T+ + PVNAL+ I GL + E A V+A+++ G G F G DI F
Sbjct: 20 RDKVLVVTVDHAPVNALSTEIRRGLLEAIEAAAGDAAVEAVLIVGAGRNFIAGADIREFG 79
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K +P+V IED KP+V A+ G LGGGLE+A+ H R+A P L
Sbjct: 80 K---PPQPPALPEVC-----RRIEDSAKPVVVALHGATLGGGLEVALAAHYRLALPGATL 131
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
GLPE+ LG++PG TQR PRL+G + A+++ML + + +E +LGL+D V S++ L
Sbjct: 132 GLPEVLLGLLPGAGGTQRAPRLIGAAAALDLMLSGRHVGAEAARELGLVDRVAASDDTLA 191
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 248
+A ++ ++R P +R L + A+ + AR + K + + Q ++ +
Sbjct: 192 EGLAYAQELLSKRAP-VRRTRDAQGLADRAAAQAAIDAARAEVAKRSRGLFSPQRIVEAV 250
Query: 249 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 308
E +V G+ +E ++F E + GL+H FFA+R +++P + G +PR + +V
Sbjct: 251 EAALVLPFDEGMKRERELFVECLDSPQRAGLIHAFFAEREAARLPGAS--GAEPREIARV 308
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
VIGGG MG+GIA A + + V+L E + L +G I LV +G+L+ +
Sbjct: 309 GVIGGGTMGAGIAVAVLDAGLPVILVERDDTALAQGRARIAKVYDALVAKGRLSDAARDE 368
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
+ L G Y +VD+VIEAV E + +KQ +F EL + P +LATNTS +D++ +
Sbjct: 369 RMARLAGSTVYDALAEVDLVIEAVFEDLAVKQAVFEELAQVAKPGVVLATNTSYLDIDAI 428
Query: 429 ----GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 484
GE+ + +IG HFFSPA++M LLEIV + + +V+ K ++KV V G
Sbjct: 429 AASAGERAAD---VIGLHFFSPANLMKLLEIVLPAQVAPEVVATAFAFAKRLRKVAVRAG 485
Query: 485 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATS 544
C GF NR Y +A L+ G ++ID AIR FG P+GP+Q++DLAG + AT
Sbjct: 486 VCDGFIGNRLLAVYRAAADYLMEDGASPYQIDRAIRGFGFPMGPYQVIDLAGGDIGWATR 545
Query: 545 KEFDKAFPDRSFQS-PLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRR 602
K A D + + + D L + G G+ +G Y Y +G++ +PD V II R
Sbjct: 546 KR-RAATRDPALRYVAIADRLCERGWFGQKTQRGFYRYPEGARVGEPDAEVEAIIAAERA 604
Query: 603 LSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRG 662
I P +++ IV L ++NE+ +VLEEGI +R D+D V G FP +RG
Sbjct: 605 AKGI----APREFSDEAIVRRYLAAMINEAAKVLEEGIALRPLDIDVVLVHGYGFPRHRG 660
Query: 663 GIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
G + +AD +G V ++++++ F++P+ L E A +G
Sbjct: 661 GPLHYADTLGLAEVLAEIRRYAEEDPVFWRPAPLLVELAGRG 702
>gi|15806500|ref|NP_295210.1| enoyl-CoA hydratase/3,2-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA
dehydrogenase [Deinococcus radiodurans R1]
gi|6459246|gb|AAF11052.1|AE001993_2 enoyl-CoA hydratase/3,2-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA
dehydrogenase [Deinococcus radiodurans R1]
Length = 708
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 257/701 (36%), Positives = 369/701 (52%), Gaps = 36/701 (5%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
V I+T+ NPPVNA + GLK + A + D VKA+V+ G G F G DI F
Sbjct: 28 VFILTINNPPVNAFGPGVPEGLKAGLDAAAADDSVKAVVIIGGGRTFVAGADIKGFGLPR 87
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
PD+ V ++ +KP VAA+ G ALGGGLELA+GC R+A QLGLP
Sbjct: 88 -----EQAPDLRG--TVAKLDAFEKPTVAAIHGTALGGGLELALGCTYRVAVKDAQLGLP 140
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 191
E+ LGV+PG TQRLPR+VG KA+EMML I + +LGL+D +V + L
Sbjct: 141 EVKLGVLPGAGGTQRLPRVVGAQKALEMMLSGNPIKAPAAKELGLVDEIVDGDLLAGAVA 200
Query: 192 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 251
AR P R R+ + GS EV AR KKT +D+ E
Sbjct: 201 FARAHADAR--PLPRVSERSVEGGSP----EVFAAAREGLKKTHRGQHSPSHIVDLAEMA 254
Query: 252 IVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVI 311
G EA F + + SRGL H+FFA+R K+ ++ ++ +I
Sbjct: 255 ATKPFQEGWDAEADRFVDSLNSPQSRGLRHIFFAEREAGKIRGLSK-DTPTTDIKSAGII 313
Query: 312 GGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALK 371
G G MG GIA + I V + E + E L +G+ I N +G++TQD +
Sbjct: 314 GAGTMGGGIAMNFLNVGIPVTIVETSQEALDRGLGVIRKNYENTAKKGRMTQDDVEKRMG 373
Query: 372 MLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEK 431
+L L + D++IEAV E++ +K+ IF+ L+K P ILA+NTST+D+N +
Sbjct: 374 LLTPTLKMEDLAGADIIIEAVFENMDVKKDIFTRLDKIAKPGAILASNTSTLDVNEIASV 433
Query: 432 TSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAV 491
T +++IG HFFSPA+VM LLEIVR ++TS V+ + + K IKKV VVVG C GF
Sbjct: 434 TGRPEQVIGLHFFSPANVMKLLEIVRADKTSDSVLATSLALAKRIKKVGVVVGVCDGFVG 493
Query: 492 NRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLA----GYGVAAATSKEF 547
NR Y AR +V G +D+A+ + GLP+GPFQ+ D+A GY + +K
Sbjct: 494 NRMVHRYGDEARKIVEEGARPEDVDAAMNALGLPMGPFQMSDMAGLDIGYSIRQHQAKVR 553
Query: 548 DKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIM 607
+ PD +D ++K+GR G+ G+Y Y + KPKP+ V +IE+ R
Sbjct: 554 GEPEPD-----GWLDRIVKTGRKGQKTQGGIYDYGEDRKPKPNADVQKLIEDYRAEQ--- 605
Query: 608 PGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFW 667
G + ++++EI + + + +VNE ++LEEGI RASD+D + G FP+YRGG + +
Sbjct: 606 -GTQSREISQEEITKRLAYSLVNEGAKILEEGIAQRASDIDVIYIYGYGFPAYRGGPMQY 664
Query: 668 ADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLS 708
A G V L+K+ Q P+ L++ A +G S
Sbjct: 665 ASEQGLKNVAADLEKYGQT------PAPVLKQLADEGKTFS 699
>gi|355685539|gb|AER97768.1| enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
[Mustela putorius furo]
Length = 722
Score = 352 bits (903), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 246/722 (34%), Positives = 387/722 (53%), Gaps = 55/722 (7%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A+I L NPPVNA++ ++ G+K ++A + VKAIV+ G G+FS G DI+ F
Sbjct: 11 LALIRLRNPPVNAISTAVLHGIKAGLQKALTDHTVKAIVICGADGKFSAGADIHSF---- 66
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
M D+ + VV+ I+ +KP+VAA++GLALGGGLELA+GCH RIA + ++G P
Sbjct: 67 ---GTPRMSDLGLGHVVDEIQRNEKPVVAAIQGLALGGGLELALGCHYRIAHAEARIGFP 123
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS---EELLK 188
E+TLG++PG TQ LPRL+G+ A++++ + I+++E KLG++D +V S EE ++
Sbjct: 124 EVTLGILPGARGTQLLPRLIGVPAALDLITSGRHISADEALKLGILDKMVNSDPVEEAIE 183
Query: 189 -VSRLWALDIAARR---KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 244
V ++ + +RR KP I+S D + A L+ +K P + C
Sbjct: 184 LVQKISDQPLESRRLCNKP-IQSFPNMDS---------IFNEALLKMRKQHPGCLSQETC 233
Query: 245 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK--- 301
+ I+ + + G+ KE ++F L +R L +VFFA+R SK + K
Sbjct: 234 VRAIQAAVQYPYEVGIKKEEELFMYLQKSGQARALQYVFFAERNASKWSTPSGASWKTAT 293
Query: 302 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 361
+ + V V+G G MG GI TA I V+ E++ K ++T + + L+ +
Sbjct: 294 AQPISSVGVVGLGTMGRGIVTALAKAKIPVIAVELDK----KQLETADQIITSLLEKEAS 349
Query: 362 TQDKANNALKMLKGVLDYS--EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATN 419
++++ K L S E VD+VIEAV E + LK+++F+EL C P L TN
Sbjct: 350 KMQRSSHHWLGPKPRLTTSLKELGGVDLVIEAVFEEINLKKQVFAELSAVCKPEAFLCTN 409
Query: 420 TSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKV 479
TS ++++ + T +IG HFFSPAH+M LLEI+ ++ +S I +M + K +KK+
Sbjct: 410 TSALNIDEIASSTDRPHLVIGTHFFSPAHIMKLLEIIPSQYSSPTTIATVMNLSKKMKKI 469
Query: 480 PVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGV 539
VVVGNC GF NR PY L+ G ID + FG +GPF++ DLAG V
Sbjct: 470 GVVVGNCFGFVGNRMLKPYYNQTYFLLEEGSKPEEIDQVLEEFGFKMGPFRVSDLAGLDV 529
Query: 540 A-------AATSKEFDKAFPDRSFQS----PLVDLLLKSGRNGKANGKGLYTYEK--GSK 586
T P R S P+ D+L +SGR G+ GKG Y Y+K G
Sbjct: 530 GWKSRQGQGLTGPMLPSGTPARKRGSERYCPIPDMLCESGRFGQKTGKGWYLYDKPLGRI 589
Query: 587 PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASD 646
KPDP + + + R+ +I +P +++ EI+E L+ ++NE+ R+L EG+
Sbjct: 590 HKPDPWLSEFLSQYRQTYHI----EPRVISQDEILERCLYSLINEAFRILGEGMAATPEH 645
Query: 647 LDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF--FKPSRFLEERATKG 704
+D + G +P ++GG +F+A VG V L+K+ + + +P +L++ A G
Sbjct: 646 IDVVYLHGYGWPRHKGGPMFYASTVGLPTVLEKLQKYYRQNPDIPQLEPCDYLKKLAYLG 705
Query: 705 IP 706
P
Sbjct: 706 NP 707
>gi|407788567|ref|ZP_11135692.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Celeribacter
baekdonensis B30]
gi|407197167|gb|EKE67246.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Celeribacter
baekdonensis B30]
Length = 650
Score = 352 bits (902), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 239/670 (35%), Positives = 352/670 (52%), Gaps = 34/670 (5%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRD-DVKAIVLTGNGGRFSGG 64
VT++V DG+ +T+ NPPVNAL + GL D AT RD DV+A+VLTG G F G
Sbjct: 4 VTVDV-RDGLGWVTIDNPPVNALGRAVRQGLWDAV--ATLRDADVRAVVLTGAGRAFVAG 60
Query: 65 FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
DI + +PDV + I D P +AA+ GLALGGGLE+AM CHARI
Sbjct: 61 ADIRELGQTPVE---PYLPDV-----LAAIADAPVPWIAAINGLALGGGLEVAMACHARI 112
Query: 125 AAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVV 181
AAP +LGLPE+ +G+IPG T RLPRLV ++ AI+++ K I ++E + GL+D +
Sbjct: 113 AAPSAKLGLPEVNIGIIPGSGGTVRLPRLVSMATAIKLVTSGKPIGAQEALESGLVDRLG 172
Query: 182 TSEELLKVSRLWALDIAARRKP---WIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 238
+ L + + + A D+AA +P R L D + ++A ++ K +R
Sbjct: 173 EGDLLAEATAM-AKDLAASGRPEPALARDLVAGDPIDWDAQAAQLRKRSRGAVAPLEALA 231
Query: 239 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDI 298
A D +E + E + F L + + L HVFFA+R + +
Sbjct: 232 SLKCAARDPVEVALA--------GERERFLWLAASEEAAALRHVFFAERGAGQALKQAEA 283
Query: 299 GLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTR 358
P + +V VIGGG MG+GIATA +L YV L E + + + V R
Sbjct: 284 --VPADLSRVGVIGGGTMGAGIATALLLAGSYVCLIERDDAAAQTAKTRVADTIAASVKR 341
Query: 359 GKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 418
G + K +AL L +Y+ +D +VIEAV E + +K+++F++L+ P ILAT
Sbjct: 342 GAIAATKGESALARLGTDTEYAALRDCPLVIEAVFEDMGVKREVFTKLDAVMPAEAILAT 401
Query: 419 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKK 478
NTS +D+N++ E T RI+G HFFSPAHVM LLE+VR E T A+ + + K+++K
Sbjct: 402 NTSYLDVNLLAETTKDPSRILGLHFFSPAHVMKLLEVVRGEATGARALATGGALAKLLRK 461
Query: 479 VPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYG 538
+PVV G C GF NR Y + ++ G +ID+A++ FG +G + + D++G
Sbjct: 462 IPVVAGVCDGFIGNRIMAAYRRDCEFMLEEGALPHQIDAAMQGFGFAMGIYAVQDMSGLD 521
Query: 539 VAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIE 598
+A A + + + D L ++GR G+ GKG Y Y G + + P V IIE
Sbjct: 522 IAWAQRRARAPHRAPEERYAHIADRLCEAGRLGRKTGKGWYDYASG-EAEVAPEVTGIIE 580
Query: 599 ECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFP 658
E + G TE+EI+ IL + E VL EGI A D+D + G FP
Sbjct: 581 E----ESAKAGRTRKVFTEQEIITRILATMQREGQAVLREGIAESADDIDVVMITGYGFP 636
Query: 659 SYRGGIVFWA 668
++GG ++ A
Sbjct: 637 RHKGGPMYMA 646
>gi|146312523|ref|YP_001177597.1| multifunctional fatty acid oxidation complex subunit alpha
[Enterobacter sp. 638]
gi|166972671|sp|A4WCW6.1|FADJ_ENT38 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|145319399|gb|ABP61546.1| 3-hydroxyacyl-CoA dehydrogenase [Enterobacter sp. 638]
Length = 715
Score = 351 bits (901), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 229/710 (32%), Positives = 369/710 (51%), Gaps = 33/710 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +A++T+ P +N L ++ ++ +++ ++ ++ F
Sbjct: 8 TLNVRLDNIAVVTIDVPGEKMNTLKAEFGVQVRSILKQVRDNKNIRGLIFISAKSDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ + A + + +++ I P++AA+ G LGGGLELA+ CH+R
Sbjct: 68 GADINMIARAKSAQEAEELARQGQQIMAE-IHGLSIPVIAAIHGACLGGGLELALACHSR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ KT LGLPE+ LG++PG TQRLPRLVG+S A+EM+L K + + K+GL+D
Sbjct: 127 VCTDDAKTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALEMILTGKQLRPRQALKVGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL A+++A + + R L +++ G L A ++ + +KT
Sbjct: 187 EVVPHSILLTA----AVELAQKERQASRHLPVRERILAGPLGRALLFNRVGKKTEQKTKG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + LDVIE G+ G SG EAK F EL M S+ L +FFA K P +
Sbjct: 243 NYPATKRILDVIETGLSQGSSSGYAAEAKAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
++ P V G G TA + V +K++N++ + ++ + V
Sbjct: 302 EVAPGPLNAIGVLGGGLMGGGISFVTAS-KGKLPVRIKDINAKGINHALQYSWQLLDQKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R + + + AL ++ G +D+S FK D+VIEAV E + LKQ++ +++E+ C PH I
Sbjct: 361 KRRHIKASERDRALALISGTIDFSGFKHRDVVIEAVFEDLQLKQQMVADVEQYCAPHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+E++ E TSAQ + ++ + K
Sbjct: 421 ASNTSSLPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHESTSAQTVATVVKLAKRQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A L++ G V +D A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVADKAGFYVNRILAPYINEAMRLLTEGEKVENVDDALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTYE---KGSKPKPDP 591
+ A+ +R F P +V +L R G+ NG+G Y Y + SK + DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSPPANVVSAILNDDRKGRKNGRGFYLYAAKGRKSKKQVDP 599
Query: 592 SVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDAS 651
SV +I N GK +T ++ E + ++NE+ R +E ++ A D D +
Sbjct: 600 SVYGLI-------NASGQGK---LTAQQCAERCVMMMLNEAARCFDEKVIKNARDGDIGA 649
Query: 652 VLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERA 701
V G+ FP + GG + D++GA V +L++ + LYG+ F P L++ A
Sbjct: 650 VFGIGFPPFLGGPFRYMDSLGAGEVVATLQRLASLYGSRFTPCETLKQMA 699
>gi|426217776|ref|XP_004003128.1| PREDICTED: peroxisomal bifunctional enzyme [Ovis aries]
Length = 723
Score = 351 bits (901), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 249/737 (33%), Positives = 389/737 (52%), Gaps = 48/737 (6%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+ +A+I L NPPVNA++I + G+K+ ++A + D VKAIV+ G G F G DI F
Sbjct: 8 QNSLALIRLRNPPVNAISIKVAHGIKESLQKAITDDTVKAIVICGADGIFCAGADIGEF- 66
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
KVH + D+ L +V+ I+ KKP+VAA++ +ALGGGLELA+GCH RIA + Q+
Sbjct: 67 KVHKSFDIQLGD------IVDEIQRNKKPVVAAIQKVALGGGLELALGCHYRIAHAEAQV 120
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS---EE 185
G PE+TLG++PG TQ LPRLVG+ A+++++ + I++ E KLG+ID +V S EE
Sbjct: 121 GFPEVTLGILPGARGTQLLPRLVGVPAALDLIISGRHISANEALKLGIIDKIVNSDPIEE 180
Query: 186 LLKVS-RLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 244
+K + R+ L +RR I ++ + SL + A LQ +K P +AC
Sbjct: 181 SIKFAQRISDLSPESRR---ICNM----PVPSLPNMDAIFSEAFLQVRKRYPGWLSPEAC 233
Query: 245 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP-- 302
+ ++ + + G KE ++ L ++ L + FFA+R +K + K
Sbjct: 234 VRAVQAAVQYPYDMGSKKEKELGLYLNTSGQAKALQYAFFAERMANKWSTPSGASWKTSS 293
Query: 303 -RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 361
R + V V+G G MG GI + I V+ E + + L K I + + + K+
Sbjct: 294 GRPISSVGVLGLGTMGRGIVISFAKAQIPVIAVESDKKQLETASKIITSILEKEAS--KM 351
Query: 362 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 421
Q + + E VD+VIEAV E + LK+ +F+EL C P L TNTS
Sbjct: 352 QQSGHPWSGPKPRLTTSMKELSGVDLVIEAVYEEMNLKKHVFAELSAICKPEAFLCTNTS 411
Query: 422 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 481
+D++ + ++ +IG HFFSPAHVM LLE++ + +S + +M + K IKK+ V
Sbjct: 412 ALDIDEIASSSNRPHLVIGTHFFSPAHVMKLLEVIPSRFSSPTTVATVMNLSKKIKKIGV 471
Query: 482 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAA 541
VVGNC GF NR Y L+ G ID + FG +GPF++ DLAG +
Sbjct: 472 VVGNCFGFVGNRMLRSYYDQTYFLLEEGSKPEEIDEVLEEFGFKMGPFRVSDLAGLDIGW 531
Query: 542 ATSKEFDKAFPD------------RSFQSPLVDLLLKSGRNGKANGKGLYTYEK--GSKP 587
+ K P R + P+ D+L +SGR G+ GKG Y Y+K G
Sbjct: 532 KSRKGQGLTGPTLPPGSSARKRGGRRY-CPIPDMLCESGRFGQKTGKGWYLYDKPLGRIH 590
Query: 588 KPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDL 647
KPDP + + + R +I KP ++ EI+E L+ ++NE+ R+LEEG+ +
Sbjct: 591 KPDPWLSQFLAQYRETYHI----KPRIISRDEILERCLYSLINEAFRILEEGMAATPEHI 646
Query: 648 DDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF--FKPSRFLEERATKG- 704
D + G +P ++GG +F+A VG V L+K+ + + +P +L++ A++G
Sbjct: 647 DVIYLHGYGWPRHKGGPMFYASTVGLPMVLEKLQKYHRQNPDIPQLEPCDYLKKLASQGN 706
Query: 705 IPLSAPVSSSSTSRARL 721
+PL S + R++L
Sbjct: 707 LPLEQWQSLAGPPRSKL 723
>gi|402700675|ref|ZP_10848654.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Pseudomonas fragi A22]
Length = 703
Score = 351 bits (900), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 236/701 (33%), Positives = 363/701 (51%), Gaps = 28/701 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A+I L + PVNAL + + L E A + +V+AI++ G+G F G DIN
Sbjct: 13 LALIGLAHAPVNALGQRLRSELLQAIERAVADGEVRAIIVYGHGVPFGAGADINE----- 67
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
+G ++ S+ V+ + KP++AA+ G+ALGG LELA+ C RI+ P + LP
Sbjct: 68 -SGTLAPFASPSLGDVLLRMTQLNKPLIAAISGMALGGSLELALACGYRISEPGARFALP 126
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS-EELLKVS 190
++ LG+IPG TQRLPRLVG ++A+EM+L + + + + GL+D + S E LL +
Sbjct: 127 QINLGLIPGAGGTQRLPRLVGAAQALEMILYGRPVNARHALQAGLLDRLAQSPETLLAEA 186
Query: 191 RLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 250
WA ++ A + P S D L + R K P Q L +E
Sbjct: 187 SEWAHELLAAQAPAQPSPPWPDPASELPA--HYFQQYRSANKHRWQGQPAPQQALAALEA 244
Query: 251 GIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAV 310
G+ EA +F++L S L HV A+ P V ++ R V +VA+
Sbjct: 245 ACNLPLAEGLAFEAGLFQQLEGSSQSEALRHVHAAEGDLGTQPGV-NLQTPIRPVHRVAI 303
Query: 311 IGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNAL 370
IG G MG GIA I V L E+ +E L G++ I N + V RGKLT+ + +
Sbjct: 304 IGAGTMGGGIAMCFANAGIPVALLELKAEALDHGLRQIRTNYQTGVKRGKLTEAQLEQRM 363
Query: 371 KMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGE 430
++L G LDY+E D D+VIEAV ES+ +KQ++F L++ C P ILA+NTST+D++ +
Sbjct: 364 ELLHGTLDYAEISDADLVIEAVFESLAIKQQVFRTLDEVCKPGAILASNTSTLDVDAIAA 423
Query: 431 KTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFA 490
T +IG HFFSPA+VM LLE+VR + T+A + +++ I K+PVV G C GF
Sbjct: 424 VTRRPQDVIGLHFFSPANVMRLLEVVRGQATAADTLATTLSIAARIGKIPVVSGVCFGFI 483
Query: 491 VNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKA 550
NR PYS+ A L+ G V +ID + GL +G + DLAG V+ + +
Sbjct: 484 GNRMLEPYSREAHRLLLEGATVAQIDKVLTDLGLAMGVLAMHDLAGIDVSYLIREARREQ 543
Query: 551 FPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGG 610
+ D L G G+ G Y Y+ G +P +P + + E + G
Sbjct: 544 IRQDPGYCKIADALYDLGHYGQKTASGFYLYQ-GREPVENPELTALAEN-------IAWG 595
Query: 611 KPIS---VTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFW 667
I+ ++ +EI + +F ++NE +L+EGI R+ D+D + G FP++RGG + +
Sbjct: 596 LGITRRVISNQEIHDRCMFMLINEGIALLDEGIAQRSGDIDLVWINGYGFPAWRGGPLHY 655
Query: 668 ADAVGANYVYTSLKKWSQLYGNF----FKPSRFLEERATKG 704
A +G + V ++ + Q G + F+P+ LE G
Sbjct: 656 ARTLGLDVVLEGIRHYRQSLGAYGQMWFQPAPLLERLVAAG 696
>gi|348519918|ref|XP_003447476.1| PREDICTED: peroxisomal bifunctional enzyme-like [Oreochromis
niloticus]
Length = 719
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 251/719 (34%), Positives = 379/719 (52%), Gaps = 53/719 (7%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
V +ITL +PPVNAL+ + G+ D + A S +VK++V+ G G FSGG DI F
Sbjct: 11 VGLITLQSPPVNALSAAVRQGIVDSMQRALSEPEVKSVVICGQNGIFSGGADIKEF---- 66
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G +S P + + ++ IE KP+VAA+EG+ALGGGLELA+GCH RIA K ++GLP
Sbjct: 67 -GGQMSGPPLIPM---IHAIEAASKPVVAAIEGIALGGGLELALGCHYRIAHSKARVGLP 122
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 191
E+TLG++PG +QRLPRL+G+ A++++ + +T+ E K GL+D + T + V+
Sbjct: 123 EVTLGLLPGAGGSQRLPRLIGVPAALDLITTGRYVTAAEALKFGLVDQI-TDHNTVNVAV 181
Query: 192 LWALDIA-----ARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLD 246
+A +A ARR L D + L E EV++ R A+ + AC+
Sbjct: 182 KFAQRVAGQPLDARRISTYPCLCPPD-VDVLFE--EVMQRVRRTARGAIAPI----ACVQ 234
Query: 247 VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK--VPNVTDIGL-KPR 303
+ G+ +E ++ L +R L + FFAQRA + +P+ KPR
Sbjct: 235 AVRAAATLPYNQGMERERELMATLFTSGQTRALQYFFFAQRAVGRWSMPSGARWDTSKPR 294
Query: 304 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQ 363
V K AVIG G MG GI A VV E + L++ + I G++ RG +
Sbjct: 295 PVHKAAVIGLGTMGRGITVALAQAGFSVVAVETQEKQLMEAKQAIS----GMLERGAKRR 350
Query: 364 DKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI 423
A AL + + DVD+VIEAV E + LK+K+F +L C L +NTS +
Sbjct: 351 GVAP-ALDKINYGCNIQSVADVDLVIEAVFEDMALKKKVFQQLSAVCKAGTFLCSNTSGL 409
Query: 424 DLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVV 483
D++ + +T + + ++G HFF+PAHVM LLE+V ++S + M +GK I KV V V
Sbjct: 410 DIDQLACQTRNPELVVGMHFFAPAHVMKLLEVVYGPKSSPLAVATAMQLGKKIGKVSVAV 469
Query: 484 GNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVA--- 540
GNC GF NR PY + A L+ G +D + FG +G F++ DL+G V
Sbjct: 470 GNCRGFVGNRMLKPYLEQALFLLEEGATPEFVDQVLEEFGFAMGVFRMSDLSGLDVGWKV 529
Query: 541 ---------AATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEK-GSK-PKP 589
+T+ + + R + SPL DLL + GR G+ G+G Y Y K GS+ KP
Sbjct: 530 RMADGLVVPNSTTGQATRLRQGRRY-SPLGDLLCEQGRFGQKTGRGWYQYNKPGSQVAKP 588
Query: 590 DPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
DP + ++E R ++ + +E++E L+ ++NE R+LE+GI D+D
Sbjct: 589 DPWLHSFLDEYRARHTLVAR----RIDHQEVLERCLYSMINEGFRILEDGIAAGPEDIDI 644
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF--FKPSRFLEERATKGIP 706
V G S+P +RGG +F+A VG N V L+ + Q + + +P L + G P
Sbjct: 645 IYVFGYSWPRHRGGPMFYATTVGLNKVLERLEHYHQAHPDVPSLQPCDLLRKLVASGSP 703
>gi|19424318|ref|NP_598290.1| peroxisomal bifunctional enzyme [Rattus norvegicus]
gi|119120|sp|P07896.2|ECHP_RAT RecName: Full=Peroxisomal bifunctional enzyme; Short=PBE;
Short=PBFE; Includes: RecName: Full=Enoyl-CoA
hydratase/3,2-trans-enoyl-CoA isomerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|206069|gb|AAA41825.1| peroxisomal enoyl-CoA: hydrotase-3-hydroxyacyl-CoA [Rattus
norvegicus]
gi|59809132|gb|AAH89777.1| Enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
[Rattus norvegicus]
gi|149019890|gb|EDL78038.1| enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
[Rattus norvegicus]
Length = 722
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 243/720 (33%), Positives = 385/720 (53%), Gaps = 52/720 (7%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A+I L NPPVNA++ ++ +++ ++A S VKAIV+ G G F G DI+ F
Sbjct: 11 LAMIRLCNPPVNAVSPTVIREVRNGLQKAGSDHTVKAIVICGANGNFCAGADIHGFS--- 67
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
+ P +++ +V+ I+ +KP++AA++G+ALGGGLELA+GCH RIA K ++GLP
Sbjct: 68 -----AFTPGLALGSLVDEIQRYQKPVLAAIQGVALGGGLELALGCHYRIANAKARVGLP 122
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS---EELLK 188
E+TLG++PG TQ LPR+VG+ A++++ K ++++E +LG++DAVV S EE +K
Sbjct: 123 EVTLGILPGARGTQLLPRVVGVPVALDLITSGKYLSADEALRLGILDAVVKSDPVEEAIK 182
Query: 189 VS-RLWALDIAARR---KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 244
+ ++ I RR KP + SL V A + +K P + + C
Sbjct: 183 FAQKIIDKPIEPRRIFNKP----------VPSLPNMDSVFAEAIAKVRKQYPGVLAPETC 232
Query: 245 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK--- 301
+ I+ + H G+ +E K+F L ++ L + FFA+++ +K + K
Sbjct: 233 VRSIQASVKHPYEVGIKEEEKLFMYLRASGQAKALQYAFFAEKSANKWSTPSGASWKTAS 292
Query: 302 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 361
+ V V V+G G MG GIA + I VV E + + L K I + +R
Sbjct: 293 AQPVSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAH- 351
Query: 362 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 421
Q+ +A L+ E VD+V+EAV E + LK+K+F+EL C P L TNTS
Sbjct: 352 -QNGQASAKPKLRFSSSTKELSTVDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTS 410
Query: 422 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 481
++++ + T +IG HFFSPAHVM LLE++ + +S I +M++ K I K+ V
Sbjct: 411 ALNVDDIASSTDRPQLVIGTHFFSPAHVMRLLEVIPSRYSSPTTIATVMSLSKKIGKIGV 470
Query: 482 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVA- 540
VVGNC GF NR PY L+ G +D + FG +GPF++ DLAG V
Sbjct: 471 VVGNCYGFVGNRMLAPYYNQGFFLLEEGSKPEDVDGVLEEFGFKMGPFRVSDLAGLDVGW 530
Query: 541 ------AATSKEFDKAFPDR----SFQSPLVDLLLKSGRNGKANGKGLYTYEK--GSKPK 588
T P R S SPL D+L ++GR G+ GKG Y Y+K G K
Sbjct: 531 KIRKGQGLTGPSLPPGTPVRKRGNSRYSPLGDMLCEAGRFGQKTGKGWYQYDKPLGRIHK 590
Query: 589 PDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLD 648
PDP + + + R + +I + +++++EI+E L+ ++NE+ R+LEEG+ R +D
Sbjct: 591 PDPWLSTFLSQYREVHHI----EQRTISKEEILERCLYSLINEAFRILEEGMAARPEHID 646
Query: 649 DASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF--FKPSRFLEERATKGIP 706
+ G +P ++GG +F+A +VG V L+K+ + + +PS +L +G P
Sbjct: 647 VIYLHGYGWPRHKGGPMFYAASVGLPTVLEKLQKYYRQNPDIPQLEPSDYLRRLVAQGSP 706
>gi|77165210|ref|YP_343735.1| multifunctional fatty acid oxidation complex subunit alpha
[Nitrosococcus oceani ATCC 19707]
gi|254433896|ref|ZP_05047404.1| 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain family
[Nitrosococcus oceani AFC27]
gi|76883524|gb|ABA58205.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Nitrosococcus oceani ATCC 19707]
gi|207090229|gb|EDZ67500.1| 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain family
[Nitrosococcus oceani AFC27]
Length = 744
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 241/731 (32%), Positives = 377/731 (51%), Gaps = 45/731 (6%)
Query: 8 MEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
+E D AII L P VN L E+ ++ D++ +VL F G
Sbjct: 11 IEKREDNAAIIWLDVPDVSVNTLQADFAQDFNRVLEQLSADKDLEVVVLASAKEDFIAGA 70
Query: 66 DINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA 125
DI + ++ A + + + + ++ +E PIVAA+ G+ LGGGLE+A+ C R+A
Sbjct: 71 DIKMLTQLPDA-EAARQLSRTAQQAMDQLEAFPLPIVAAIHGVCLGGGLEVALACRGRVA 129
Query: 126 --APKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAV 180
+ +T+LG PE+ LGVIPG TQRLPRLVGL A+ M+L K+ + + LGL+D V
Sbjct: 130 TNSARTRLGQPEVKLGVIPGVGGTQRLPRLVGLETALNMILTGKTHPASKACALGLVDEV 189
Query: 181 VTSEELLKVSRLWALDIAAR--RKPWIRSLHRTDKL-GSLSEAREVLKL----------- 226
V LL+ + A ++ ++P + + ++ GS+ R+V L
Sbjct: 190 VPRPVLLEAALARARELVQENNKEPEAGTFQQVSRIFGSMLSLRKVRSLLLEKNSLGRSM 249
Query: 227 ARLQAKK-----TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVH 281
QAKK T N+P L+VI+ G+ G +G E + F +L + +R L+
Sbjct: 250 VFNQAKKKVLSHTHGNLPAPLQALEVIKTGMEQGLEAGFKAEVEAFGDLAVSTKARNLMA 309
Query: 282 VFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEY 340
+F A+ A K P TD + PR VRKV V+G GLMGSGIA + V LK++ E
Sbjct: 310 LFLAKSALKKDPG-TDEEIAPRLVRKVGVLGAGLMGSGIAYVTAAKARLPVRLKDLKQEV 368
Query: 341 LLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQ 400
L +G++T+ V V + ++T + + L +++ +Y+ FK D+VIEAV+E + +KQ
Sbjct: 369 LRQGLRTLWNAVTEQVKKRRMTAGEGDRVLALVRPTTEYTGFKQADVVIEAVVEDLKVKQ 428
Query: 401 KIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTER 460
++ E+E P I A+NTS+I ++ + E + + ++G H+FSP +PLLE++ TE+
Sbjct: 429 QVLREVEAHGGPEMIFASNTSSIPIHKIAEASDRPEAVVGMHYFSPVPKVPLLEVIVTEK 488
Query: 461 TSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIR 520
T +V+ + +GK K +VV + GF R PY A L++ GV + ID A+
Sbjct: 489 TVPEVVATCVALGKQQNKTVIVVRDGAGFYTTRILAPYINEATHLLAEGVSIQDIDKALV 548
Query: 521 SFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYT 580
+FG P+GP +LLD G V + ++AF +R + ++ L+ S R GK NG+GLY
Sbjct: 549 NFGFPVGPLKLLDEVGIDVVQKIAHILEEAFGERMKPTSVLAKLVSSHRLGKKNGQGLYR 608
Query: 581 YE------KGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCR 634
Y+ KG + D SV + I P K + EI L P++NE+
Sbjct: 609 YQKMDGIFKGKGKQVDQSVYQSL-------GIKPDKK---LEANEIAMRCLLPMINEAVH 658
Query: 635 VLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPS 694
EGI+ A D D +V G+ FP + GG + D G V L + + +G F P+
Sbjct: 659 CYHEGILRSARDGDVGAVFGLGFPPFLGGPFRFIDNQGLRNVSKQLVHYQEQFGKRFTPA 718
Query: 695 RFLEERATKGI 705
L + A +GI
Sbjct: 719 SLLVDLAQQGI 729
>gi|295982065|pdb|2X58|A Chain A, The Crystal Structure Of Mfe1 Liganded With Coa
gi|295982066|pdb|2X58|B Chain B, The Crystal Structure Of Mfe1 Liganded With Coa
Length = 727
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 243/720 (33%), Positives = 385/720 (53%), Gaps = 52/720 (7%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A+I L NPPVNA++ ++ +++ ++A S VKAIV+ G G F G DI+ F
Sbjct: 16 LAMIRLCNPPVNAVSPTVIREVRNGLQKAGSDHTVKAIVICGANGNFCAGADIHGFS--- 72
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
+ P +++ +V+ I+ +KP++AA++G+ALGGGLELA+GCH RIA K ++GLP
Sbjct: 73 -----AFTPGLALGSLVDEIQRYQKPVLAAIQGVALGGGLELALGCHYRIANAKARVGLP 127
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS---EELLK 188
E+TLG++PG TQ LPR+VG+ A++++ K ++++E +LG++DAVV S EE +K
Sbjct: 128 EVTLGILPGARGTQLLPRVVGVPVALDLITSGKYLSADEALRLGILDAVVKSDPVEEAIK 187
Query: 189 VS-RLWALDIAARR---KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 244
+ ++ I RR KP + SL V A + +K P + + C
Sbjct: 188 FAQKIIDKPIEPRRIFNKP----------VPSLPNMDSVFAEAIAKVRKQYPGVLAPETC 237
Query: 245 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK--- 301
+ I+ + H G+ +E K+F L ++ L + FFA+++ +K + K
Sbjct: 238 VRSIQASVKHPYEVGIKEEEKLFMYLRASGQAKALQYAFFAEKSANKWSTPSGASWKTAS 297
Query: 302 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 361
+ V V V+G G MG GIA + I VV E + + L K I + +R
Sbjct: 298 AQPVSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAH- 356
Query: 362 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 421
Q+ +A L+ E VD+V+EAV E + LK+K+F+EL C P L TNTS
Sbjct: 357 -QNGQASAKPKLRFSSSTKELSTVDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTS 415
Query: 422 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 481
++++ + T +IG HFFSPAHVM LLE++ + +S I +M++ K I K+ V
Sbjct: 416 ALNVDDIASSTDRPQLVIGTHFFSPAHVMRLLEVIPSRYSSPTTIATVMSLSKKIGKIGV 475
Query: 482 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVA- 540
VVGNC GF NR PY L+ G +D + FG +GPF++ DLAG V
Sbjct: 476 VVGNCYGFVGNRMLAPYYNQGFFLLEEGSKPEDVDGVLEEFGFKMGPFRVSDLAGLDVGW 535
Query: 541 ------AATSKEFDKAFPDR----SFQSPLVDLLLKSGRNGKANGKGLYTYEK--GSKPK 588
T P R S SPL D+L ++GR G+ GKG Y Y+K G K
Sbjct: 536 KIRKGQGLTGPSLPPGTPVRKRGNSRYSPLGDMLCEAGRFGQKTGKGWYQYDKPLGRIHK 595
Query: 589 PDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLD 648
PDP + + + R + +I + +++++EI+E L+ ++NE+ R+LEEG+ R +D
Sbjct: 596 PDPWLSTFLSQYREVHHI----EQRTISKEEILERCLYSLINEAFRILEEGMAARPEHID 651
Query: 649 DASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF--FKPSRFLEERATKGIP 706
+ G +P ++GG +F+A +VG V L+K+ + + +PS +L +G P
Sbjct: 652 VIYLHGYGWPRHKGGPMFYAASVGLPTVLEKLQKYYRQNPDIPQLEPSDYLRRLVAQGSP 711
>gi|83943661|ref|ZP_00956119.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Sulfitobacter sp. EE-36]
gi|83845341|gb|EAP83220.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Sulfitobacter sp. EE-36]
Length = 698
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 241/702 (34%), Positives = 367/702 (52%), Gaps = 40/702 (5%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA++ + NPPVNAL+ + GL +A + D VKA+V+ G G F G DI F K
Sbjct: 13 VAVLRIKNPPVNALSHAVREGLVAGMAQAEADDGVKAVVIVGEGRAFIAGADITEFGKTP 72
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
+PDV IED +VA++ G++LGGGLE+A+ H R+A P ++GLP
Sbjct: 73 LE---PFLPDV-----CKRIEDSPLIVVASMHGVSLGGGLEIALSAHYRVAQPSAKVGLP 124
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 191
E+ LG+IPG TQRLPRL+G+ +++++ + + + E LG++D VT + V
Sbjct: 125 EVHLGLIPGAGATQRLPRLIGVDPSLDLITSGRQVKAAEAESLGIVDQ-VTEGDPEDVGV 183
Query: 192 LWALDIAARRKPW--IRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
+A ++ A P + + + + LK R Q A +
Sbjct: 184 AYAENLIATNAPRRPVSEMAAPAPIDWDAAYDGTLKKGRGQISPAQAVRAVQAAAELPFD 243
Query: 250 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 309
EG+ L E K+F EL+ D +G++H FF++RA +P + G++PR ++ +
Sbjct: 244 EGM--------LAERKIFMELMETDQRQGMIHAFFSERAVGNLPELK--GVEPRALQSIG 293
Query: 310 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDK---- 365
+IGGG MG+GIATA +L VVL E+ + I N+ G + RGK+TQ K
Sbjct: 294 IIGGGTMGAGIATAALLAGFNVVLIEMKEDAAEAARGRIAGNLSGALKRGKITQMKYDAM 353
Query: 366 ANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL 425
N AL++ ++Y VD+VIEAV E + +K+++F +L+ C P ILA+NTS +D+
Sbjct: 354 TNTALEV---SINYDSLASVDLVIEAVFEDMGVKKEVFGKLDAVCKPGAILASNTSYLDV 410
Query: 426 NIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 485
+ + TS +IG HFFSPAH+M LLE+V E+T+ V+ +GK + K+ V G
Sbjct: 411 DEIAASTSRPADVIGLHFFSPAHIMKLLEVVVAEKTAPDVVATGFALGKALNKISVRAGV 470
Query: 486 CTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSK 545
C GF NR Y +A +V G F+ID A+ FG +GPF + DLAG + AT K
Sbjct: 471 CDGFIGNRILATYRTAADHMVLDGASPFQIDKALVDFGFAMGPFAVGDLAGLDIGWATRK 530
Query: 546 EFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK---PKPDPSVLPIIEECRR 602
D + ++G G+ GKG Y YE GS+ P P+ S L E R
Sbjct: 531 RKAATRHPAERVPTYPDKICEAGNFGQKTGKGYYIYEAGSRGGVPNPEVSELIAAERAER 590
Query: 603 LSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRG 662
G P T+ EIV + +VNE+ +V+ EGI R D+D + G FP Y G
Sbjct: 591 ------GITPRDFTDAEIVRRYMAAMVNEAAKVVGEGIAKRPLDVDMVLLFGYGFPRYWG 644
Query: 663 GIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
G + WAD G + ++ +++ F++P+ L++ +G
Sbjct: 645 GPMKWADLQGLPALLADIESYAKEDAWFWEPAPLLKQLVAEG 686
>gi|400260680|pdb|3ZW8|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) In Apo Form
gi|400260681|pdb|3ZW8|B Chain B, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) In Apo Form
gi|400260682|pdb|3ZW9|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
(2s,3s)-3-hydroxy-2- Methylbutanoyl-coa
gi|400260683|pdb|3ZW9|B Chain B, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
(2s,3s)-3-hydroxy-2- Methylbutanoyl-coa
gi|400260684|pdb|3ZWA|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
3s-hydroxy-hexanoyl-coa
gi|400260685|pdb|3ZWA|B Chain B, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
3s-hydroxy-hexanoyl-coa
gi|400260688|pdb|3ZWC|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
3s-hydroxy-decanoyl-coa
gi|400260689|pdb|3ZWC|B Chain B, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
3s-hydroxy-decanoyl-coa
Length = 742
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 243/720 (33%), Positives = 385/720 (53%), Gaps = 52/720 (7%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A+I L NPPVNA++ ++ +++ ++A S VKAIV+ G G F G DI+ F
Sbjct: 31 LAMIRLCNPPVNAVSPTVIREVRNGLQKAGSDHTVKAIVICGANGNFCAGADIHGFS--- 87
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
+ P +++ +V+ I+ +KP++AA++G+ALGGGLELA+GCH RIA K ++GLP
Sbjct: 88 -----AFTPGLALGSLVDEIQRYQKPVLAAIQGVALGGGLELALGCHYRIANAKARVGLP 142
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS---EELLK 188
E+TLG++PG TQ LPR+VG+ A++++ K ++++E +LG++DAVV S EE +K
Sbjct: 143 EVTLGILPGARGTQLLPRVVGVPVALDLITSGKYLSADEALRLGILDAVVKSDPVEEAIK 202
Query: 189 VS-RLWALDIAARR---KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 244
+ ++ I RR KP + SL V A + +K P + + C
Sbjct: 203 FAQKIIDKPIEPRRIFNKP----------VPSLPNMDSVFAEAIAKVRKQYPGVLAPETC 252
Query: 245 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK--- 301
+ I+ + H G+ +E K+F L ++ L + FFA+++ +K + K
Sbjct: 253 VRSIQASVKHPYEVGIKEEEKLFMYLRASGQAKALQYAFFAEKSANKWSTPSGASWKTAS 312
Query: 302 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 361
+ V V V+G G MG GIA + I VV E + + L K I + +R
Sbjct: 313 AQPVSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAH- 371
Query: 362 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 421
Q+ +A L+ E VD+V+EAV E + LK+K+F+EL C P L TNTS
Sbjct: 372 -QNGQASAKPKLRFSSSTKELSTVDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTS 430
Query: 422 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 481
++++ + T +IG HFFSPAHVM LLE++ + +S I +M++ K I K+ V
Sbjct: 431 ALNVDDIASSTDRPQLVIGTHFFSPAHVMRLLEVIPSRYSSPTTIATVMSLSKKIGKIGV 490
Query: 482 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVA- 540
VVGNC GF NR PY L+ G +D + FG +GPF++ DLAG V
Sbjct: 491 VVGNCYGFVGNRMLAPYYNQGFFLLEEGSKPEDVDGVLEEFGFKMGPFRVSDLAGLDVGW 550
Query: 541 ------AATSKEFDKAFPDR----SFQSPLVDLLLKSGRNGKANGKGLYTYEK--GSKPK 588
T P R S SPL D+L ++GR G+ GKG Y Y+K G K
Sbjct: 551 KIRKGQGLTGPSLPPGTPVRKRGNSRYSPLGDMLCEAGRFGQKTGKGWYQYDKPLGRIHK 610
Query: 589 PDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLD 648
PDP + + + R + +I + +++++EI+E L+ ++NE+ R+LEEG+ R +D
Sbjct: 611 PDPWLSTFLSQYREVHHI----EQRTISKEEILERCLYSLINEAFRILEEGMAARPEHID 666
Query: 649 DASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF--FKPSRFLEERATKGIP 706
+ G +P ++GG +F+A +VG V L+K+ + + +PS +L +G P
Sbjct: 667 VIYLHGYGWPRHKGGPMFYAASVGLPTVLEKLQKYYRQNPDIPQLEPSDYLRRLVAQGSP 726
>gi|398844584|ref|ZP_10601644.1| 3-hydroxyacyl-CoA dehydrogenase [Pseudomonas sp. GM84]
gi|398254406|gb|EJN39503.1| 3-hydroxyacyl-CoA dehydrogenase [Pseudomonas sp. GM84]
Length = 703
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 252/705 (35%), Positives = 376/705 (53%), Gaps = 36/705 (5%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A+I L PPVNAL P+ A L + E+A + V+AIVL G G FS G DI+ F
Sbjct: 13 LALIGLARPPVNALGQPLRAALLEACEQAQADPAVRAIVLYGANGLFSAGADISEF---- 68
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G PD+ ++ + KP+VAA+ LALGGGLELA+ C RI P T++GLP
Sbjct: 69 GTQASCAAPDLPG--LLQRLTSMDKPLVAALGKLALGGGLELALACGYRIGEPGTRVGLP 126
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT-SEELLKVS 190
E+ LG++PG TQRLPRL+G +A++++L + SE +LG++D V ++ LL +
Sbjct: 127 EINLGLLPGAGGTQRLPRLIGARQALDLILAGTPVNSETALRLGILDRVAKHADALLDEA 186
Query: 191 RLWALDIAARRKPWIRSLHRTDKLGSLSEA--REVLKLARLQAK-KTAPNM---PQHQAC 244
+A ++ R + D G L + L+ + K + AP + AC
Sbjct: 187 CAFARELLGDRAAARPDVPYPDPAGGLPDDFFEHFLEANAPRWKSRLAPRLVLDALQAAC 246
Query: 245 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPR 303
+ EG+ H E +FK+ S L HVFFA+R +KVP + D+ L+P
Sbjct: 247 RWPLTEGLAH--------EQVLFKQAEDSRQSAALRHVFFAEREAAKVPWIEADLPLRP- 297
Query: 304 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQ 363
+ KVAVIG G MG GIA I V+L E + L +GI I N V RGKL
Sbjct: 298 -ICKVAVIGAGTMGGGIAMNFANAGIPVILLERQQDALDRGIAQINRNYANSVKRGKLAP 356
Query: 364 DKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI 423
++ ++ G LDY++ +DVD+VIEAV E + +KQ++F L++ C P ILATNTS++
Sbjct: 357 EQLEQRTTLISGTLDYADLRDVDLVIEAVFEKLEIKQEVFRTLDEVCKPGAILATNTSSL 416
Query: 424 DLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVV 483
D++ + TS +IG HFFSPA+VM LLE+V +T+A V+ + +G+ I K+PVV
Sbjct: 417 DVDRIAAVTSRPHDVIGLHFFSPANVMRLLEVVNGRQTAADVLATTLKLGRTIGKLPVVS 476
Query: 484 GNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAAT 543
G C GF NR PY++ A LV G ++D+ + L +G +LDLAG V
Sbjct: 477 GVCFGFIGNRMLEPYAREAHRLVLEGASPAQVDNVLTGLDLNMGVLSMLDLAGIDVNFLV 536
Query: 544 SKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRL 603
A L D L GR G+ G+G Y Y+ + + D V+ + E R
Sbjct: 537 RDANRTAINHDDSYCRLGDELYALGRYGQKTGRGFYLYDDRER-QEDYEVIALAE--RLA 593
Query: 604 SNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGG 663
+ +PI +EI + LF ++NE ++L+EGI +RASD+D + G FP++ GG
Sbjct: 594 GELHIPRRPIDA--QEIHDRCLFMLINEGIQLLDEGIALRASDIDLVWINGYGFPAHLGG 651
Query: 664 IVFWADAVGANYVYTSLKKWSQLYGNF----FKPSRFLEERATKG 704
+ +A+ +G + V ++ + Q G + F+P+ L G
Sbjct: 652 PMHYAEQLGLDKVLRGIEHYRQTLGAYGEMWFQPAPLLARLVAAG 696
>gi|432932478|ref|XP_004081759.1| PREDICTED: peroxisomal bifunctional enzyme-like [Oryzias latipes]
Length = 717
Score = 349 bits (896), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 246/715 (34%), Positives = 369/715 (51%), Gaps = 47/715 (6%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
V +ITL+NPPVNAL+ + G+ D ++A S VK++V+ G+ G+F GG DI F
Sbjct: 11 VGLITLLNPPVNALSAAVRQGIVDTMDKALSDRKVKSVVICGHNGKFCGGADIREFS--- 67
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
S + + ++ +E KP+VAA+EG+ALGGGLELA+GCH RIA K +LGLP
Sbjct: 68 -----SPLTGPPLIPLIQGVESAAKPVVAAIEGVALGGGLELALGCHYRIAHSKARLGLP 122
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVV---TSEELLK 188
E+ LG++PG +QRLPRL+G+ A++++ + +T E +LGL+D V T +E +K
Sbjct: 123 EVHLGLLPGAGGSQRLPRLIGVPAALDLITTGRHVTGAEALQLGLVDKVTDRNTVDEAVK 182
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 248
+ A R+ R L +L E + R++ + P AC+ +
Sbjct: 183 FALSVADQPPNSRRVSTFPCPRHPDLDALFEG----AMQRVRQRARGALAPV--ACVQAV 236
Query: 249 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK--VPNVTDIGL-KPRGV 305
G+ +E ++ L +R + FFAQRA + +P+ KP V
Sbjct: 237 RAAATLPYAQGMERERELMATLFTSGQARAQQYHFFAQRAVGRWSMPSGARWDTTKPGAV 296
Query: 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANV-RGLVTRGKLTQD 364
K VIG G MG GI+ A + + VV E N + L++ + I + + RG RG
Sbjct: 297 HKAMVIGLGTMGRGISVALVQAGVSVVAMETNEKQLMEAKQAISSMLERGAKRRG----- 351
Query: 365 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 424
AL + + DVD+VIEAV E + LK+K+F +L C P L +NTS +D
Sbjct: 352 -VAPALDKIGYSSNMEPAADVDLVIEAVFEDMALKKKVFQQLSALCKPGTFLCSNTSGLD 410
Query: 425 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 484
++ + +T + ++G HFF+PAHVM LLE+V R+S Q + M +GK + KV V VG
Sbjct: 411 IDQLASETRHPELVVGMHFFAPAHVMKLLEVVYGSRSSPQAVATAMELGKQMGKVSVAVG 470
Query: 485 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATS 544
NC GF NR PY + A L+ G +D + FG +G F++ DL+G V
Sbjct: 471 NCRGFVGNRMLKPYLEQAFFLLEEGTTPEFVDQVLEEFGFAMGVFRMSDLSGLDVGWRVR 530
Query: 545 K-----EFDKAFPDRSFQ----SPLVDLLLKSGRNGKANGKGLYTYEK--GSKPKPDPSV 593
K + R Q SPL DLL + GR G+ G+G Y Y+K G KPDP +
Sbjct: 531 KADGLLNASEGHSARIRQGCRYSPLGDLLCEQGRFGQKTGRGWYQYDKPGGRVAKPDPWL 590
Query: 594 LPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVL 653
+E+ R ++ + +E++E L+ ++NE R+LE+GI D+D VL
Sbjct: 591 HGFLEKFRTQHGLV----ARRIDHQEVLERCLYALMNEGFRILEDGIAAGPEDIDVIYVL 646
Query: 654 GMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF--FKPSRFLEERATKGIP 706
G S+P +RGG +F+A VG V L+ + Q + + KP L G P
Sbjct: 647 GYSWPPHRGGPMFYAGMVGLQKVLERLEHYHQEHPDIPSLKPCNLLRNLVVNGSP 701
>gi|406596127|ref|YP_006747257.1| multifunctional fatty acid oxidation complex subunit alpha
[Alteromonas macleodii ATCC 27126]
gi|406373448|gb|AFS36703.1| multifunctional fatty acid oxidation complex subunit alpha
[Alteromonas macleodii ATCC 27126]
Length = 713
Score = 349 bits (895), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 248/708 (35%), Positives = 374/708 (52%), Gaps = 36/708 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPI---VAGLKDKFEEATSRDDVKAIVLT-GNGGR 60
T+ ++GVAI+++ P +N L ++ + D E +S +K +VLT G
Sbjct: 13 TLTKQDNGVAILSMDVPGESMNTLKAEFGDEISAMLDDIERDSS---IKGVVLTSGKPSS 69
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
F G DI + A D + + + + + IE+ K VAA+ G ALGGGLELA+ C
Sbjct: 70 FVAGADITMLAACKTAEDATTIA-AGGQAIFDRIENMKATFVAAIHGPALGGGLELALAC 128
Query: 121 HARIA--APKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLG 175
H R+ +P TQ+GLPE+ LG++PG TQRLPRL+G+ +A++MML +++ K G
Sbjct: 129 HYRVCTDSPSTQVGLPEVQLGLLPGSGGTQRLPRLIGIQQAMKMMLTGSPARAKQAKKYG 188
Query: 176 LIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRT--DK-LGSLSEAREVL-KLARLQA 231
++D VV LLKV+ +AL +RKP + ++ DK L R ++ K AR
Sbjct: 189 IVDDVVPHSVLLKVAEQFAL----KRKPEREAPQKSVMDKVLEKTGPGRNMMFKKAREAT 244
Query: 232 -KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATS 290
KT N P +DVIE G+ G +G+ EA+ F +LVM S L +FFA
Sbjct: 245 FAKTKGNYPAPGYIIDVIETGMNEGMKAGLKAEAEAFGKLVMTPESFQLRQIFFATTEMK 304
Query: 291 KVPNVTDIGLKPRGVRKVAVIGGGLMGSGIA-TAHILNNIYVVLKEVNSEYLLKGIKTIE 349
K V G+KP ++KV V+GGGLMG GIA + V +K+V +E + +K
Sbjct: 305 KENGVE--GVKPEKMKKVGVLGGGLMGGGIAYVTSTKAGVPVRIKDVRAEGIANAMKYSY 362
Query: 350 ANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKA 409
+ V + + + L +L G LDYS ++D D+V+EAV E + LKQK+ +++E+
Sbjct: 363 DILNKKVKKRFMRNSEMQKQLALLTGTLDYSGYQDADIVVEAVFEDLDLKQKMVADIEEN 422
Query: 410 CPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDL 469
C I A+NTS+I + + K + + +IG H+FSP MPL E++ ++TS QVI
Sbjct: 423 CKESTIFASNTSSIPITQIAAKAARPENVIGLHYFSPVDKMPLAEVIAHDKTSDQVISST 482
Query: 470 MTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 529
+ K K PVVV + GF VNR PY A L+ G + ID ++ FG P+GP
Sbjct: 483 VEFAKKQGKTPVVVKDGAGFYVNRILAPYMNEAANLILDGEPIEHIDKSLVKFGFPVGPV 542
Query: 530 QLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKP 589
+LLD G V +AF +R D +L GR GK N KG Y+YE G KP
Sbjct: 543 KLLDEVGIDVGTKIIPFLVEAFGERFTAPSAFDKVLADGRKGKKNQKGFYSYE-GKKPGK 601
Query: 590 DPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
+ + E L + P K ++EKE+ E + ++NE+ R L+EG++ A D D
Sbjct: 602 E-----VDESIYELLGLSPSAK---LSEKEVAERCVLMMLNEAARCLDEGVIRNARDGDI 653
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 697
++ G+ FP + GG + D +G +V L ++ G+ F P+ L
Sbjct: 654 GAIFGIGFPPFLGGPFRYMDTLGIKHVVARLNHYATAVGDKFAPAEVL 701
>gi|407793797|ref|ZP_11140828.1| multifunctional fatty acid oxidation complex subunit alpha
[Idiomarina xiamenensis 10-D-4]
gi|407213951|gb|EKE83802.1| multifunctional fatty acid oxidation complex subunit alpha
[Idiomarina xiamenensis 10-D-4]
Length = 705
Score = 348 bits (893), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 240/709 (33%), Positives = 364/709 (51%), Gaps = 26/709 (3%)
Query: 8 MEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVLT-GNGGRFSGG 64
+ + G+A+IT+ P +N L + + ++ D+ +V++ G F G
Sbjct: 7 LSIDEQGLALITIDVPGESMNTLKSSFAEEVGEILQQLEGNSDINGVVISSGKASSFIAG 66
Query: 65 FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
DI + AGD + + + + IE P+VAA+ G LGGGLELAM CH R+
Sbjct: 67 ADIGMIDACETAGDTESLARQG-QAMFDRIEQLPVPVVAAIHGACLGGGLELAMACHYRV 125
Query: 125 AA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDA 179
+ +TQLGLPE+ LG++PG TQRLPR+VG+ + + M+L K + ++ K GL+D
Sbjct: 126 CSDDERTQLGLPEVKLGLLPGSGGTQRLPRIVGIQQGLTMILTGKQLRPKQARKAGLVDD 185
Query: 180 VVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAK-KTAPNM 238
VV LL+ ++ AL RR S G+ + K A QA+ K N
Sbjct: 186 VVPRSILLEAAKQLALSSKPRRAKVKHSGINKLLEGTSIGRNFIFKKAGEQAQAKAHGNY 245
Query: 239 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDI 298
P A +D I+ G G G+ +EA+ F L M + SR L H+FFA A K
Sbjct: 246 PAIDAIIDSIKVGQEQGFKEGLSREAEHFGRLAMTEQSRQLRHIFFATTAMKKETGAD-- 303
Query: 299 GLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEANVRGLVT 357
G+KP V +V V+GGGLMG GIA +N +K++ + + + + V
Sbjct: 304 GVKPEKVERVGVLGGGLMGGGIAYVSAVNAKAPTRIKDIAEKGIASALHYSYERLLKKVK 363
Query: 358 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 417
R +T+++ + L G LDY F+ D+VIEAV E + LKQK+ +++E+ H I A
Sbjct: 364 RKHITRNELETTMLRLSGSLDYRGFERADIVIEAVFEDIELKQKMVADIEQHAAQHTIFA 423
Query: 418 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 477
+NTS++ + + +++IG H+FSP MPL EI+ TS + I + +
Sbjct: 424 SNTSSLPITKIAANAQRPEQVIGLHYFSPVEKMPLAEIITHAGTSDKTIATTVAFARRQG 483
Query: 478 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGY 537
K P+VV + GF VNR PY A LV G + ++D A+ FG P+GP +L+D G
Sbjct: 484 KTPIVVKDGAGFYVNRILAPYMNEAARLVLAGEPIEKVDKALVKFGFPVGPMKLMDEVGI 543
Query: 538 GVAAATSKEFDKAFPDRSFQSPLV-DLLLKSGRNGKANGKGLYTY-EKGSKPKPDPSVLP 595
VAA S +R FQ+P LL R GK NGKG Y Y K S K D SV
Sbjct: 544 DVAAKVSPILAAELGER-FQAPQAFQRLLDDDRKGKKNGKGFYAYGGKQSGKKVDDSVYK 602
Query: 596 IIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGM 655
+ + P G+ ++E++I + P++NE+ L+EGI+ A D D ++ G+
Sbjct: 603 TL-------AVEPSGQ---LSEQQIAMRCVLPMLNEAVYCLDEGIIRSARDGDIGAIFGI 652
Query: 656 SFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
FP +RGG + D++G + V T L++W +G FKP+ L++ A G
Sbjct: 653 GFPPFRGGPFRYMDSLGIDTVLTQLQQWQSEHGEQFKPAEKLQQMAAAG 701
>gi|455739751|ref|YP_007506017.1| Enoyl-CoA hydratase [Morganella morganii subsp. morganii KT]
gi|455421314|gb|AGG31644.1| Enoyl-CoA hydratase [Morganella morganii subsp. morganii KT]
Length = 716
Score = 348 bits (893), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 227/721 (31%), Positives = 368/721 (51%), Gaps = 41/721 (5%)
Query: 2 AAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKA-IVLTGNGGR 60
+A R+T+ + GV I + VN L A + +A ++A ++++G
Sbjct: 9 SAFRLTVRPDHTGVITIDVPGEKVNTLKAEFAAQFEAVLRDARQIPGLRAMVIISGKPDT 68
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
F G DI++ A + + S + + NLIE+ P+VAA+ G LGGGLELAM C
Sbjct: 69 FIAGADIHMIAGCTEAAQAQALSE-SGQRLFNLIENYPLPVVAAIHGSCLGGGLELAMAC 127
Query: 121 HARIA--APKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLG 175
H+R+ + KT+LGLPE+ LG++PG TQRLP L+GL A++MML + + +++ K+
Sbjct: 128 HSRVVTDSDKTRLGLPEVQLGLLPGSGGTQRLPALIGLVAALDMMLTGRQLRAKQAVKMR 187
Query: 176 LIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQA-KKT 234
L D +V + LL+ + AL ++ + R +K+ L + + ++ R Q +++
Sbjct: 188 LADDIVPPDILLETAVARALSANPAQRDPVPFRQRLEKMKGLRDI--IFRITRSQVHRRS 245
Query: 235 APNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPN 294
+ P + +DV++ G+ G +G EA F +L + S L H+FFA A K
Sbjct: 246 GGHYPAAEQIIDVVQCGLEKGREAGFKAEAAAFGKLAVTPVSGALRHLFFASTALKKE-- 303
Query: 295 VTDIGLKPRGVRKVAVIGGGLMGSGIAT-AHILNNIYVVLKEVNSEYLLKGIKTIEANVR 353
+ G+KP + VAV+GGGLMG+GIA + V +K+V+ E K + ++
Sbjct: 304 -SADGVKPAELHHVAVLGGGLMGAGIAAITRQRAGLPVRIKDVSQEGANKALAFFWQHLS 362
Query: 354 GLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPH 413
V R +L+ + + + G DY F +D V EAV ES+ LKQ++ +E+E P
Sbjct: 363 KQVKRRRLSPRERTQLMSGMTGTTDYRGFHRIDFVAEAVFESLALKQQMIAEIEAVTSPD 422
Query: 414 CILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVG 473
I A+NTS++ + + + S +++IG H+FSPA MPL EI+ E T A + + +
Sbjct: 423 TIFASNTSSLPIRDIAARASRPEKVIGLHYFSPAEKMPLAEIIPHEGTDAVTLATTLQLA 482
Query: 474 KIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLD 533
+ K +VVG+ GF VNR PY A ++ G +ID A+ FG PIGP LLD
Sbjct: 483 RRQGKTAIVVGDKAGFYVNRILAPYITEALRCLTEGEPPEKIDKALTDFGFPIGPVALLD 542
Query: 534 LAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYE---------KG 584
G V + AF +R P +D L + R G+ N +G Y Y +
Sbjct: 543 EVGIDVGTKIMPVLEAAFGERFALPPQLDALFRDNRLGRKNKRGFYDYTPLPWWKRCGRK 602
Query: 585 SKPKPDPSVLPI----IEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGI 640
+ K D ++ P+ ++EC +T +EI E L ++NE+ R L+E +
Sbjct: 603 APRKADKAIYPLLGITVQEC--------------LTSQEITERCLMMMLNEAVRTLDEQV 648
Query: 641 VVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEER 700
+ +D D +V G+ FP + GG ++ D++ A + L + YG F P L++R
Sbjct: 649 IRSPADGDAGAVFGIGFPPFLGGPFYYMDSMSAVVMTEKLTALAARYGGRFTPCEALQQR 708
Query: 701 A 701
A
Sbjct: 709 A 709
>gi|389684613|ref|ZP_10175941.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
family protein [Pseudomonas chlororaphis O6]
gi|388551836|gb|EIM15101.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
family protein [Pseudomonas chlororaphis O6]
Length = 703
Score = 348 bits (893), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 239/707 (33%), Positives = 367/707 (51%), Gaps = 40/707 (5%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A+I L PPVNAL+ P+ A + + E A + V+AI+L G G FS G DI F
Sbjct: 13 LALIGLSRPPVNALSQPLRAAIIEACERAAADIRVQAIILYGEHGLFSAGADIGEF---- 68
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G PD+ LV + + KP+VAA+ LALGG LELA+ C R+ P T++GL
Sbjct: 69 GTEACFAEPDLPSTLVR--LTEIPKPLVAAMGKLALGGALELALACGYRMGEPGTRVGLS 126
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS-EELLKVS 190
E+ LG++PG TQRLPRL+G A+ ++L + I +E LG++D + +S E+LL +
Sbjct: 127 EINLGLLPGAGGTQRLPRLIGAESALNLILSGEQIDAERARMLGILDRIASSAEQLLDEA 186
Query: 191 RLWA---LDIAARRKP---WIRSLHR--TDKLGSLSEAREVLKLARLQAKKTAPNMPQHQ 242
+A ++ A +P W + D L E +RL + +
Sbjct: 187 CAYANELIECGAPARPAEAWPKPAEDLPDDFLARYRAEHEPRWKSRLAPRLVLSAL--EA 244
Query: 243 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLK 301
ACL +EEG+ +E +FK+ S+ L HVFFA+R +VP + +DI
Sbjct: 245 ACLLPLEEGLA--------RELALFKQAEASRQSKALRHVFFAERKAGRVPGIGSDI--T 294
Query: 302 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 361
PR + KVAVIG G +G+GIA + I V L E L +G+ I + V GK+
Sbjct: 295 PRKLDKVAVIGAGPLGAGIAMSFADVGIPVALLEPEGGALDRGLMQIRKLYQASVKHGKM 354
Query: 362 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 421
+ + + +L G LDY + D D+VIEA+ E +K+++F LE+ C P ILAT+TS
Sbjct: 355 SAAQLQQRMDLLFGTLDYEDLADADLVIEALYEKPGVKRQVFLSLEQVCKPGAILATSTS 414
Query: 422 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 481
++D++ + +IG HFFSPA+VM L+E+VR + T+ +V+ M + K I K+PV
Sbjct: 415 SLDIDAIAASLGRPQDVIGLHFFSPANVMRLVEVVRGKATAPEVLASAMQIAKRIGKLPV 474
Query: 482 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAA 541
+ G G R PY++ A LV G ++DS + L +G F +LDLAG V+
Sbjct: 475 ISGAGQGAIGERMLEPYAREAHRLVLEGATPAQVDSVLTGLDLNMGVFSMLDLAGIDVSF 534
Query: 542 ATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECR 601
T A + L GR G+ G+G Y YE G + D V + E+
Sbjct: 535 LTRDANRAATAHDQSYCCIAQELCALGRYGQKTGRGFYLYE-GQNRQEDYEVTALAEQLA 593
Query: 602 RLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYR 661
++ ++ + EI + LF ++NE ++L+EGI +RASD+D + G FP++
Sbjct: 594 GELDV----PRRAIEDLEIHDRCLFMLINEGIQLLDEGIALRASDIDLVWINGYGFPAHL 649
Query: 662 GGIVFWADAVGANYVYTSLKKWSQLYGNF----FKPSRFLEERATKG 704
GG + +A+ +G + V + + Q G + F+P+ LE G
Sbjct: 650 GGPLHYAEQLGLDQVLCGILHYRQALGEYGQMWFRPAALLERLVAAG 696
>gi|421491873|ref|ZP_15939235.1| FADJ [Morganella morganii subsp. morganii KT]
gi|400193633|gb|EJO26767.1| FADJ [Morganella morganii subsp. morganii KT]
Length = 717
Score = 348 bits (892), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 228/721 (31%), Positives = 368/721 (51%), Gaps = 41/721 (5%)
Query: 2 AAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGR 60
+A R+T+ + GV I + VN L A + +A ++A+V+ +G
Sbjct: 10 SAFRLTVRPDHTGVITIDVPGEKVNTLKAEFAAQFEAVLRDARQIPGLRAMVIISGKPDT 69
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
F G DI++ A + + S + + NLIE+ P+VAA+ G LGGGLELAM C
Sbjct: 70 FIAGADIHMIAGCTEAAQAQALSE-SGQRLFNLIENYPLPVVAAIHGSCLGGGLELAMAC 128
Query: 121 HARIA--APKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLG 175
H+R+ + KT+LGLPE+ LG++PG TQRLP L+GL A++MML + + +++ K+
Sbjct: 129 HSRVVTDSDKTRLGLPEVQLGLLPGSGGTQRLPALIGLVAALDMMLTGRQLRAKQAVKMR 188
Query: 176 LIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQA-KKT 234
L D +V + LL+ + AL ++ + R +K+ L + + ++ R Q +++
Sbjct: 189 LADDIVPPDILLETAVARALSANPAQRDPVPFRQRLEKMKGLRDI--IFRITRSQVHRRS 246
Query: 235 APNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPN 294
+ P + +DV++ G+ G +G EA F +L + S L H+FFA A K
Sbjct: 247 GGHYPAAEQIIDVVQCGLEKGREAGFKAEAAAFGKLAVTPVSGALRHLFFASTALKKE-- 304
Query: 295 VTDIGLKPRGVRKVAVIGGGLMGSGIAT-AHILNNIYVVLKEVNSEYLLKGIKTIEANVR 353
+ G+KP + VAV+GGGLMG+GIA + V +K+V+ E K + ++
Sbjct: 305 -SADGVKPAELHHVAVLGGGLMGAGIAAITRQRAGLPVRIKDVSQEGANKALAFFWQHLS 363
Query: 354 GLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPH 413
V R +L+ + + + G DY F +D V EAV ES+ LKQ++ +E+E P
Sbjct: 364 KQVKRRRLSPRERTQLMSGMTGTTDYRGFHRIDFVAEAVFESLALKQQMIAEIEAVTSPD 423
Query: 414 CILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVG 473
I A+NTS++ + + + S +++IG H+FSPA MPL EI+ E T A + + +
Sbjct: 424 TIFASNTSSLPIRDIAARASRPEKVIGLHYFSPAEKMPLAEIIPHEGTDAVTLATTLQLA 483
Query: 474 KIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLD 533
+ K +VVG+ GF VNR PY A ++ G +ID A+ FG PIGP LLD
Sbjct: 484 RRQGKTAIVVGDKAGFYVNRILAPYITEALRCLTEGEPPEKIDKALTDFGFPIGPVALLD 543
Query: 534 LAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYE---------KG 584
G V + AF +R P +D L + R G+ N +G Y Y +
Sbjct: 544 EVGIDVGTKIMPVLEAAFGERFALPPQLDALFRDNRLGRKNKRGFYDYTPLPWWKRCGRK 603
Query: 585 SKPKPDPSVLPI----IEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGI 640
+ K D ++ P+ ++EC +T +EI E L ++NE+ R L+E +
Sbjct: 604 APRKADKAIYPLLGITVQEC--------------LTSQEITERCLMMMLNEAVRTLDEQV 649
Query: 641 VVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEER 700
+ +D D +V G+ FP + GG ++ D++ A + L + YG F P L++R
Sbjct: 650 IRSPADGDAGAVFGIGFPPFLGGPFYYMDSMSAVVMTEKLTALAARYGGRFTPCEALQQR 709
Query: 701 A 701
A
Sbjct: 710 A 710
>gi|410860966|ref|YP_006976200.1| multifunctional fatty acid oxidation complex subunit alpha
[Alteromonas macleodii AltDE1]
gi|410818228|gb|AFV84845.1| multifunctional fatty acid oxidation complex subunit alpha
[Alteromonas macleodii AltDE1]
Length = 719
Score = 348 bits (892), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 246/705 (34%), Positives = 372/705 (52%), Gaps = 30/705 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVLT-GNGGRFSG 63
T+ ++GVAI+++ P +N L + ++ +K +VLT G F
Sbjct: 19 TLTKQDNGVAILSMDVPGESMNTLKAEFGDEISTMLDDIERDSSIKGVVLTSGKPTSFVA 78
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DI++ + A D + + + + + IE+ K VAA+ G ALGGGLELA+ CH R
Sbjct: 79 GADISMLAECKTAEDATTIA-AGGQAIFDRIENMKATFVAAIHGPALGGGLELALACHYR 137
Query: 124 IA--APKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ +P TQ+GLPE+ LG++PG TQRLPRL+G+ +A++MML +++ K G++D
Sbjct: 138 VCTDSPSTQVGLPEVQLGLLPGSGGTQRLPRLIGVQQAMKMMLTGSPARAKQAKKYGIVD 197
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRT--DK-LGSLSEAREVL-KLARLQA-KK 233
VV LLKV+ +AL +RKP + ++ DK L R ++ K AR K
Sbjct: 198 DVVPHSVLLKVAEQFAL----KRKPEREAPQKSVMDKMLEKTGPGRNMMFKKAREATFAK 253
Query: 234 TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 293
T N P +DVIE GI +G+ EA+ F +LVM S L +FFA K
Sbjct: 254 TKGNYPAPGHIIDVIETGINEDMKAGLKAEAEAFGKLVMTPESFQLRQIFFATTEMKKEN 313
Query: 294 NVTDIGLKPRGVRKVAVIGGGLMGSGIA-TAHILNNIYVVLKEVNSEYLLKGIKTIEANV 352
V G+KP ++KV V+GGGLMG GIA + V +K+V +E + +K +
Sbjct: 314 GVE--GVKPEKMKKVGVLGGGLMGGGIAYVTSTKAGVPVRIKDVRAEGIANAMKYSYDIL 371
Query: 353 RGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPP 412
V + + + L +L G LDYS ++DVD+V+EAV E + LKQK+ +++E+ C
Sbjct: 372 NKKVKKRFMRNSEMQKQLALLTGTLDYSGYQDVDIVVEAVFEDLDLKQKMVADIEENCKE 431
Query: 413 HCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTV 472
I A+NTS+I + + + + + +IG H+FSP MPL E++ E+TS QVI +
Sbjct: 432 STIFASNTSSIPITQIAAEAARPENVIGLHYFSPVDKMPLAEVIAHEKTSDQVISSTVEF 491
Query: 473 GKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLL 532
K K PVVV + GF VNR PY A L+ G + ID ++ FG P+GP +LL
Sbjct: 492 AKKQGKTPVVVKDGAGFYVNRILAPYMNEAANLILDGEPIEHIDKSLVKFGFPVGPVKLL 551
Query: 533 DLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPS 592
D G V +AF +R D +L GR GK N KG Y+YE G KP +
Sbjct: 552 DEVGIDVGTKIIPFLVEAFGERFTAPSAFDKVLADGRKGKKNQKGFYSYE-GKKPGKE-- 608
Query: 593 VLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASV 652
+ E L + P K ++EKE+ E + ++NE+ R L+EG++ A D D ++
Sbjct: 609 ---VDESIYELLGLSPSAK---LSEKEVAERCVLMMLNEAARCLDEGVIRNARDGDIGAI 662
Query: 653 LGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 697
G+ FP + GG + D +G +V L ++ G+ F P+ L
Sbjct: 663 FGIGFPPFLGGPFRYMDMLGIKHVVARLNHYATAVGDKFAPADVL 707
>gi|424853225|ref|ZP_18277602.1| fatty oxidation complex, alpha subunit FadB [Rhodococcus opacus
PD630]
gi|356665148|gb|EHI45230.1| fatty oxidation complex, alpha subunit FadB [Rhodococcus opacus
PD630]
Length = 687
Score = 348 bits (892), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 237/695 (34%), Positives = 360/695 (51%), Gaps = 52/695 (7%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D V ++T+ NPPVNA + + AGL E A + D+V AIVL G G F G D+ F
Sbjct: 20 EDRVGVLTIDNPPVNASSAAVRAGLMSGLEVAEADDEVDAIVLIGAGTNFVSGSDLREF- 78
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+G V P+ + V+ +IE KP+VAA+ G LGGG ELA+GC RIA +
Sbjct: 79 ----SGPV---PEPQLPTVIAVIEAGAKPVVAALSGATLGGGFELALGCDGRIALAGGVV 131
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE---E 185
GLPE+TLG+IPG TQR RL+G ++ +E++ + + E+ + GLID VVT E
Sbjct: 132 GLPEITLGMIPGAGGTQRPLRLIGPARTLELVTSGERLPVEQAHREGLIDEVVTGSLRAE 191
Query: 186 LLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACL 245
+ +R A R K +R+L LG+ + EV +A ++ A PQ A +
Sbjct: 192 AIHFAR------ALRGKRILRNL---PVLGA--DPVEVEHVATAALRRAA--RPQTVAAV 238
Query: 246 DVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV--PNVTDIGLKPR 303
I G E F L S L H+FFA+RA K P + R
Sbjct: 239 GAILMGSSAPADRAFQHERAEFDRLRNGTESSALRHLFFARRAALKANRPALA------R 292
Query: 304 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQ 363
++ V V+G G MG+GIA A + + VVL + + + ++ RG+VTRG+LT+
Sbjct: 293 ELKSVGVVGAGTMGAGIARAFVEAGVPVVLVDQQRQAAAAAAERLKQAYRGMVTRGRLTE 352
Query: 364 DKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI 423
A L +L + ++ D+VIEAV E + +K+ + +LE PH LATNTS +
Sbjct: 353 SDAQQHLSLLTAGTTIRDLEETDLVIEAVYEDMEVKRAVLRQLETVLRPHVPLATNTSYL 412
Query: 424 DLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVV 483
D+N + + R++G HFFSPAH +LEIVR E+TS + + +T K+++K+P++
Sbjct: 413 DINEIAAAVARPTRVLGMHFFSPAHRAAVLEIVRGEKTSTEALDVALTAAKVLEKMPILA 472
Query: 484 GNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVA--- 540
G C GF NR + Y + L++ G ++D+A+ FG +GPF + D++G +A
Sbjct: 473 GVCDGFIGNRIYNAYRRQCELMLEEGALPQQVDAALTEFGFAMGPFAVSDMSGLDIAWRM 532
Query: 541 ---AATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPI 596
A +++ + +PD + D L + GR G+ G G Y YE GS+ P PD +V +
Sbjct: 533 RKGKAGTRDPRERYPD------VADALCELGRFGQKAGDGWYHYEPGSRTPHPDSTVEAL 586
Query: 597 IEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMS 656
IE+ + I + T ++IV L + NE+ +L +GI R SD+D LG
Sbjct: 587 IEQSSQRKAITRA----AFTSQDIVTRALVTMANEAALLLADGIADRPSDIDLMLTLGYG 642
Query: 657 FPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFF 691
FP++ GGI W ++ L + G+ F
Sbjct: 643 FPTHEGGITHWVGRQDRRFLEHELDALAARTGHGF 677
>gi|354484178|ref|XP_003504267.1| PREDICTED: peroxisomal bifunctional enzyme-like [Cricetulus
griseus]
Length = 722
Score = 348 bits (892), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 238/713 (33%), Positives = 380/713 (53%), Gaps = 38/713 (5%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A+I L NPPVNA++ +++G+++ ++A S +KA+V+ G+ G FS G DI+ F
Sbjct: 11 LAMIRLCNPPVNAISPAVISGIREGLQKAGSDYTIKAVVICGSNGIFSAGADIHSFS--- 67
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
S P + + VV+ ++ CKKP+VAA++ +ALGGGLELA+GCH RIA + ++G P
Sbjct: 68 -----SPSPGLRLGDVVDEMQRCKKPLVAAIQSVALGGGLELALGCHYRIANAQARIGFP 122
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 191
E+TLG++PG TQ LPRL+G+ A++++ + I + E KLG++D VVTS+ + + R
Sbjct: 123 EVTLGILPGARGTQLLPRLIGVPIALDLITSGRHILAGEALKLGILDEVVTSDPVEEAVR 182
Query: 192 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 251
+A I + R L++ + SL + A + +K P + C+ ++
Sbjct: 183 -FAQKIMDKPIEPRRILNKP--VPSLPNMDRIFAEAITKVRKQFPGRLAPETCVRSVQAS 239
Query: 252 IVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK---PRGVRKV 308
+ H G+ +E K+F L +R L + FFA+++ +K + K + V V
Sbjct: 240 VKHPYEVGIKEEEKLFMYLRASGQARALQYAFFAEKSANKWSTPSGASWKTASAQPVSSV 299
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
V+G G MG GIA + + VV E + + L K I A + + K+ Q +
Sbjct: 300 GVLGLGTMGRGIAISFVRAGFPVVAVESDLKQLDSARKMITATLEKEAS--KMQQSGQAS 357
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
A L+ E VD+V+EAV E + LK+++F+EL C P L TNTS ++++ +
Sbjct: 358 ARPKLRFSSSTKELSSVDLVVEAVFEDMNLKKQVFAELSALCKPGAFLCTNTSALNVDEI 417
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
T +IG HFFSPAH+M LLE++ + +S I +M + K I K+ VVVGNC G
Sbjct: 418 ASATDCPHLVIGTHFFSPAHIMKLLEVIPSRYSSPATIATVMNLSKKIGKIGVVVGNCHG 477
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVA-------A 541
F NR PY L+ G ID AI FG +GPF++ DLAG V
Sbjct: 478 FVGNRMLSPYYSQTYFLLEEGSKPEDIDGAIEEFGFRMGPFRVSDLAGLDVGWKIRKGQG 537
Query: 542 ATSKEFDKAFPDR----SFQSPLVDLLLKSGRNGKANGKGLYTYEK--GSKPKPDPSVLP 595
T P R S SPL DLL + GR G+ GKG Y Y+K G KPDP +
Sbjct: 538 LTGPSLPPGTPARKRGNSRYSPLPDLLCEYGRFGQKTGKGWYQYDKPLGRIHKPDPWLST 597
Query: 596 IIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGM 655
+ + R +I + ++++EI+E ++ ++NE+ R+L EG+ +D + G
Sbjct: 598 FLSQYRATHHI----EQHFISKEEILERCMYALINEAFRILGEGMAASPEHIDVIYLNGY 653
Query: 656 SFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF--FKPSRFLEERATKGIP 706
+P + GG +++A +VG + L+K+ + + +PS +L + +G P
Sbjct: 654 GWPRHLGGPMYYAASVGLPTILEKLQKYYKQNPDIPQLEPSDYLRKLVAQGNP 706
>gi|87310775|ref|ZP_01092902.1| fatty oxidation complex, alpha subunit FadB [Blastopirellula marina
DSM 3645]
gi|87286532|gb|EAQ78439.1| fatty oxidation complex, alpha subunit FadB [Blastopirellula marina
DSM 3645]
Length = 724
Score = 348 bits (892), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 222/713 (31%), Positives = 361/713 (50%), Gaps = 24/713 (3%)
Query: 6 VTMEVGNDGVAIITLINPP--VNALAIPIVAGLKDKFEEATSRDDVKAIVLT-GNGGRFS 62
+T+ G A++T +P N L+ ++ L +E +D+ +V+T G G F
Sbjct: 7 ITLSFPQAGFALLTFNDPSKGANILSRSVMDELAAHLDEIDGCEDIYGLVITSGKPGIFI 66
Query: 63 GGFDINVFQKVHGAG--DVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
G DI F GA +++ M ++ L + VAA++G+ +GGG ELA+ C
Sbjct: 67 AGADIREFVASVGASKEEIAAMSQRGQQIFARL-SSSRYMSVAAIDGVCVGGGAELAVWC 125
Query: 121 HARI--AAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLG 175
RI PKT+LG PE+ LG+ PG T RLPR+VGLS A+EM+ +S+++ K+G
Sbjct: 126 DRRILSTGPKTELGFPEVKLGIFPGWGGTVRLPRIVGLSNAVEMITGGESVSAANAAKMG 185
Query: 176 LIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAK--- 232
L D + ++L+ + + ++ K +++ +SE A A
Sbjct: 186 LADDFTSPDDLVAAA-IRMIEQDQESKSYLQDREVRSAAIEMSETELGFLGATASAYIQG 244
Query: 233 KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 292
+T P A L+ + G + S + EA+ L + L++VFF K
Sbjct: 245 QTKGQYPAPMAALETLLGGAMVDAESALTMEAEGLAGLFGTPVNAALMNVFFLTDRNKKD 304
Query: 293 PNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANV 352
V ++ + V+VIG G+MG+GIA A I I L + N+E L +G+ +
Sbjct: 305 DGVDQDDVEKTKIESVSVIGAGIMGAGIAAASIRRGILTTLSDANAEALRRGVAGVLEEA 364
Query: 353 RGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPP 412
GK T KA ML + SE +VIEA++E++ +K+KI++ LE
Sbjct: 365 AYDRDAGKKTIAKAVEGAAMLNASISDSEVAASKLVIEAIVENLEVKRKIYARLEPQLAD 424
Query: 413 HCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTV 472
ILA+NTST+ + + + +R +G HFF+P M L+E++R +TS + +
Sbjct: 425 DAILASNTSTLPITQLAANLAKPERFVGIHFFNPVRKMKLVEVIRGAQTSDATVASAVAF 484
Query: 473 GKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLL 532
K + K P+VV + GF VNR FPY A L+ GV + R+D + FG+P+GP L
Sbjct: 485 AKRLGKFPIVVNDGPGFLVNRLLFPYMNEALALLQEGVSMERVDKCAKKFGMPLGPITLY 544
Query: 533 DLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYE-KGSKPKPDP 591
D+ G A + AFPDR+ SP++ L+K+GR G+ +G G Y+YE + + +PDP
Sbjct: 545 DMVGIDTAFYAGRTMYDAFPDRTLASPILPALVKAGRLGQKSGLGFYSYENRKRRAQPDP 604
Query: 592 SVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDAS 651
+ I+ + G P T+ ++++ + P++ E+ R +E IV D+D
Sbjct: 605 AAAKYIDPYIK-------GMPRDETDAQVIDRLFLPMLLEATRAMEANIVRDVRDIDLGL 657
Query: 652 VLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+ G+ FP ++GG++FWAD +GA + LK W + +G +KP+ L E A G
Sbjct: 658 IFGLGFPPFKGGLMFWADTIGAKQLVERLKPWEE-FGVRYKPTELLLEMAKSG 709
>gi|301759735|ref|XP_002915716.1| PREDICTED: peroxisomal bifunctional enzyme-like [Ailuropoda
melanoleuca]
Length = 723
Score = 348 bits (892), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 250/724 (34%), Positives = 384/724 (53%), Gaps = 55/724 (7%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
+ +A+I L NPPVNA++ +V G+K+ +A + VKAIV+ G G+FS G DI+ F
Sbjct: 9 NSLALIRLRNPPVNAISAAVVHGIKEGLRKAITDHTVKAIVICGADGKFSAGADIHNF-- 66
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
P + + VV+ I+ +KP VAA++GLALGGGLELA+GCH RIA + Q+G
Sbjct: 67 -----SAPGKPGLVLGHVVDEIQRNEKPTVAAIQGLALGGGLELALGCHYRIAHAEAQIG 121
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS---EEL 186
PE+TLG++PG TQ LPRL+G+ A++++ + I ++E KLG++D +V S EE
Sbjct: 122 FPEVTLGLLPGARGTQLLPRLIGVPAALDLITSGRHILADEALKLGILDEIVNSDPVEEA 181
Query: 187 LKVS-RLWALDIAARR---KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQ 242
+K++ R+ + +RR KP I+SL D + SEA L+ +K P +
Sbjct: 182 IKLAERISDQPLESRRLCNKP-IQSLPNMDSI--FSEAF-------LKMRKQHPGCLSQE 231
Query: 243 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK- 301
C+ ++ + + G+ KE ++F L +R L +VFFA+R SK + K
Sbjct: 232 TCVRAVQAAVQYPYEVGLKKEEELFMYLQKSGQARALQYVFFAERNVSKWSTPSGASWKT 291
Query: 302 --PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRG 359
+ V V+G G MG GI + I V+ E + K ++ E + L+ +
Sbjct: 292 AVAHHISSVGVVGLGTMGRGIVISLAKAKIPVIAVESDK----KQLEVAEKIISSLLEKE 347
Query: 360 KLTQDKANNALKMLKGVLDYS--EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 417
+++ K L S E VD+VIEAV E + LK+++F+EL C P L
Sbjct: 348 ASKMQHSSHPWLGPKPRLTTSMKELGGVDLVIEAVFEEINLKKQVFAELSAVCKPEAFLC 407
Query: 418 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 477
TNTS +D++ + T +IG HFFSPAHVM LLEI+ + +S I +M + K IK
Sbjct: 408 TNTSALDIDEIASSTDRPHLVIGTHFFSPAHVMKLLEIIPGQYSSPTTIATVMNLSKKIK 467
Query: 478 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGY 537
K+ VVVGNC GF NR Y L+ G +D + FGL +GPF++ DLAG
Sbjct: 468 KIGVVVGNCFGFVGNRMLKAYYNQTYFLLEEGSKPEGVDQVLEEFGLKMGPFRVSDLAGL 527
Query: 538 GVA-------AATSKEFDKAFPDRS----FQSPLVDLLLKSGRNGKANGKGLYTYEK--G 584
+ T + P R P+ D+L +SGR G+ GKG Y Y+K G
Sbjct: 528 DIGWKSRQGQGLTGPKLPSGTPARKRGNRRYCPIPDMLCESGRFGQKTGKGWYQYDKPLG 587
Query: 585 SKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRA 644
KPDP + + + R +I +P +++ EI+E L+ ++NE+ R+LEEG+
Sbjct: 588 RIHKPDPWLSEFLSQYRETYHI----EPRIISQDEILERCLYSLINEAFRILEEGMAAAP 643
Query: 645 SDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF--FKPSRFLEERAT 702
+D + G +P +RGG +F+A VG V L+K+ + + +P +L++ A+
Sbjct: 644 EHIDVIYLHGYGWPRHRGGPMFYASTVGLPTVLEKLQKYYRQNPDIPQLEPCDYLKKLAS 703
Query: 703 KGIP 706
G P
Sbjct: 704 LGNP 707
>gi|410474786|ref|YP_006898067.1| bifunctional enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase
[Bordetella parapertussis Bpp5]
gi|408444896|emb|CCJ51684.1| probable enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase,
bifunctional enzyme [Bordetella parapertussis Bpp5]
Length = 705
Score = 348 bits (892), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 242/700 (34%), Positives = 365/700 (52%), Gaps = 37/700 (5%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA++++ NPP+NAL+ + AGL EA + V+A+VL G F G DI F +
Sbjct: 21 VAVLSVDNPPINALSDTVRAGLCSALREAEADPAVRAVVLACEGNTFVAGADIREFARAK 80
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
GA + +P V IE C KP+VAA+ G ALGGGLEL + CH R+A +LGLP
Sbjct: 81 GAAEAIDVPAV--------IESCHKPVVAALHGQALGGGLELGLACHGRVALAGCRLGLP 132
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 191
E+TLG+IPG TQRLPRL+GL A E++L +I +E + GL+DAV R
Sbjct: 133 EITLGLIPGGGGTQRLPRLIGLEAAAELILSGATIDAETARESGLLDAVWPDR-----LR 187
Query: 192 LWALDIAARRKPWIRSLHRTDKLG----SLSEAREVLKLARLQAKKTAPNMPQHQACLDV 247
A++ AA + R L S +++ K+A +++ A PQ A
Sbjct: 188 ERAIEFAASLADSPAGVRRASTLAHPPMSPQTGQDLRKIA--ESRPAALRAPQAGAAAVE 245
Query: 248 IEEGIVHGGY-SGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 306
+ G E ++F L + SR L +FFA+R+ +V + D P
Sbjct: 246 ALSAAAQPDFVRGRALERELFARLRDGEESRALRALFFAERSARRV-GLDDATSAPPMAH 304
Query: 307 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 366
AV+G G MG GIA A + V L +V L + ++ I A+ R L RG++T+ A
Sbjct: 305 DAAVVGAGTMGRGIAIALADAGLRVRLIDVEQASLDRALEAIRAHYRSLAARGRMTEAAA 364
Query: 367 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 426
+A+ + D + D+V+EA E + +KQ IF +L+ P +LATNTST+D++
Sbjct: 365 RDAVARISPASDMQAAAEADVVVEAAFEDLAIKQAIFRQLDSIVRPGAVLATNTSTLDVD 424
Query: 427 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 486
+ T ++G HFFSPA+VM LLE+VR RT+ + + ++ +G+ + KV V VG C
Sbjct: 425 AIAAATRRPQDVVGTHFFSPANVMCLLEVVRGARTAPRTLGAVLALGRRMGKVCVTVGVC 484
Query: 487 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKE 546
GF NR ++ LL+ G ID A R FG +GP DLAG ++ +
Sbjct: 485 DGFVANRMSAHRARQIELLLQHGALPQDIDQAAREFGFSMGPCAATDLAGLDISWRIRR- 543
Query: 547 FDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSN 605
+ +SP+ D L + GR G+ G+G ++Y GS+ PDP V +I RR++
Sbjct: 544 ------GKGARSPIADALCELGRFGQKVGRGYFSYAPGSRVAVPDPEVEALI---RRMAE 594
Query: 606 IMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIV 665
+ G + S I + ++ PV+NE RVL++G+ +A D+D V G +P+ RGG +
Sbjct: 595 QL-GIRRQSFDLATITDRLILPVINEGARVLQDGVARQARDIDLIWVHGFGWPARRGGPM 653
Query: 666 FWADAVGANYVYTSLKKWSQ-LYGNFFKPSRFLEERATKG 704
F A+ VG V L + + L +P+ L + AT+G
Sbjct: 654 FHAERVGLASVCDRLARLADALEDASLQPAPLLRDLATRG 693
>gi|407683075|ref|YP_006798249.1| multifunctional fatty acid oxidation complex subunit alpha
[Alteromonas macleodii str. 'English Channel 673']
gi|407244686|gb|AFT73872.1| multifunctional fatty acid oxidation complex subunit alpha
[Alteromonas macleodii str. 'English Channel 673']
Length = 713
Score = 348 bits (892), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 248/708 (35%), Positives = 374/708 (52%), Gaps = 36/708 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPI---VAGLKDKFEEATSRDDVKAIVLT-GNGGR 60
T+ ++GVAI+++ P +N L ++ + D E +S +K +VLT G
Sbjct: 13 TLTKQDNGVAILSMDVPGESMNTLKAEFGDEISAMLDDIERDSS---IKGVVLTSGKPSS 69
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
F G DI + A D + + + + + IE+ K VAA+ G ALGGGLELA+ C
Sbjct: 70 FVAGADITMLAACKTAEDATTIA-AGGQAIFDRIENMKATFVAAIHGPALGGGLELALAC 128
Query: 121 HARIA--APKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLG 175
H R+ +P TQ+GLPE+ LG++PG TQRLPRL+G+ +A++MML +++ K G
Sbjct: 129 HYRVCTDSPSTQVGLPEVQLGLLPGSGGTQRLPRLIGIQQAMKMMLTGSPARAKQAKKYG 188
Query: 176 LIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRT--DK-LGSLSEAREVL-KLARLQA 231
++D VV LLKV+ +AL +RKP + ++ DK L R ++ K AR
Sbjct: 189 IVDDVVPHSVLLKVAEQFAL----KRKPEREAPQKSVMDKVLEKTGPGRNMMFKKAREAT 244
Query: 232 -KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATS 290
KT N P +DVIE G+ G +G+ EA+ F +LVM S L +FFA
Sbjct: 245 FAKTKGNYPAPGYIIDVIETGMNEGMKAGLKAEAEAFGKLVMTPESFQLRQIFFATTEMK 304
Query: 291 KVPNVTDIGLKPRGVRKVAVIGGGLMGSGIA-TAHILNNIYVVLKEVNSEYLLKGIKTIE 349
K V G+KP ++KV V+GGGLMG GIA + V +K+V +E + +K
Sbjct: 305 KENGVE--GVKPEKMKKVGVLGGGLMGGGIAYVTSTKAGVPVRIKDVRAEGIANAMKYSY 362
Query: 350 ANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKA 409
+ V + + + L +L G LDYS +++ D+V+EAV E + LKQK+ +++E+
Sbjct: 363 DILNKKVKKRFMRNSEMQKQLALLTGTLDYSGYQNADIVVEAVFEDLDLKQKMVADIEEN 422
Query: 410 CPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDL 469
C I A+NTS+I + + K + + +IG H+FSP MPL E++ +RTS QVI
Sbjct: 423 CKESTIFASNTSSIPITQIAAKAARPENVIGLHYFSPVDKMPLAEVIAHDRTSDQVISST 482
Query: 470 MTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 529
+ K K PVVV + GF VNR PY A L+ G + ID ++ FG P+GP
Sbjct: 483 VEFAKKQGKTPVVVKDGAGFYVNRILAPYMNEAANLILDGEPIEHIDKSLVKFGFPVGPV 542
Query: 530 QLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKP 589
+LLD G V +AF +R D +L GR GK N KG Y+YE G KP
Sbjct: 543 KLLDEVGIDVGTKIIPFLVEAFGERFTAPSAFDKVLADGRKGKKNQKGFYSYE-GKKPGK 601
Query: 590 DPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
+ + E L + P K ++EKE+ E + ++NE+ R L+EG++ A D D
Sbjct: 602 E-----VDESIYELLGLSPSAK---LSEKEVAERCVLMMLNEAARCLDEGVIRSARDGDI 653
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 697
++ G+ FP + GG + D +G +V L ++ G+ F P+ L
Sbjct: 654 GAIFGIGFPPFLGGPFRYMDTLGIKHVVARLNHYATAVGDKFAPAEVL 701
>gi|26248728|ref|NP_754768.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli CFT073]
gi|227887400|ref|ZP_04005205.1| 3-hydroxybutyryl-CoA epimerase [Escherichia coli 83972]
gi|300983688|ref|ZP_07176700.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
45-1]
gi|386630138|ref|YP_006149858.1| multifunctional fatty acid oxidation complex [Escherichia coli str.
'clone D i2']
gi|386635058|ref|YP_006154777.1| multifunctional fatty acid oxidation complex [Escherichia coli str.
'clone D i14']
gi|386639910|ref|YP_006106708.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli ABU
83972]
gi|422364998|ref|ZP_16445502.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
153-1]
gi|432412549|ref|ZP_19655212.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE39]
gi|432432626|ref|ZP_19675054.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE187]
gi|432437109|ref|ZP_19679497.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE188]
gi|432457447|ref|ZP_19699630.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE201]
gi|432496445|ref|ZP_19738241.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE214]
gi|432505186|ref|ZP_19746909.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE220]
gi|432524581|ref|ZP_19761709.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE230]
gi|432569418|ref|ZP_19805929.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE53]
gi|432593603|ref|ZP_19829919.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE60]
gi|432608272|ref|ZP_19844456.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE67]
gi|432651912|ref|ZP_19887665.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE87]
gi|432784303|ref|ZP_20018482.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE63]
gi|432845340|ref|ZP_20078140.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE141]
gi|432974487|ref|ZP_20163325.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE209]
gi|432996092|ref|ZP_20184678.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE218]
gi|433000661|ref|ZP_20189186.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE223]
gi|433058857|ref|ZP_20245903.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE124]
gi|433088018|ref|ZP_20274389.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE137]
gi|433116272|ref|ZP_20302063.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE153]
gi|433125941|ref|ZP_20311499.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE160]
gi|433140011|ref|ZP_20325266.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE167]
gi|433149927|ref|ZP_20334948.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE174]
gi|433208511|ref|ZP_20392185.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE97]
gi|433213294|ref|ZP_20396884.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE99]
gi|442608119|ref|ZP_21022879.1| Enoyl-CoA hydratase [Escherichia coli Nissle 1917]
gi|81475439|sp|Q8FFG4.1|FADJ_ECOL6 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|26109134|gb|AAN81336.1|AE016764_18 Putative fatty oxidation complex alpha subunit [Escherichia coli
CFT073]
gi|47600725|emb|CAE55846.1| putative fatty acid oxidation complex alpha subunit [Escherichia
coli Nissle 1917]
gi|227835750|gb|EEJ46216.1| 3-hydroxybutyryl-CoA epimerase [Escherichia coli 83972]
gi|300408483|gb|EFJ92021.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
45-1]
gi|307554402|gb|ADN47177.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli ABU
83972]
gi|315292298|gb|EFU51650.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
153-1]
gi|355421037|gb|AER85234.1| multifunctional fatty acid oxidation complex [Escherichia coli str.
'clone D i2']
gi|355425957|gb|AER90153.1| multifunctional fatty acid oxidation complex [Escherichia coli str.
'clone D i14']
gi|430934956|gb|ELC55303.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE39]
gi|430952367|gb|ELC71432.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE187]
gi|430962440|gb|ELC80297.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE188]
gi|430981740|gb|ELC98463.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE201]
gi|431023703|gb|ELD36898.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE214]
gi|431037536|gb|ELD48512.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE220]
gi|431051697|gb|ELD61360.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE230]
gi|431099194|gb|ELE04493.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE53]
gi|431127201|gb|ELE29510.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE60]
gi|431137216|gb|ELE39063.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE67]
gi|431189767|gb|ELE89184.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE87]
gi|431328726|gb|ELG16030.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE63]
gi|431394196|gb|ELG77732.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE141]
gi|431488574|gb|ELH68206.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE209]
gi|431505122|gb|ELH83744.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE218]
gi|431508647|gb|ELH86919.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE223]
gi|431569112|gb|ELI42074.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE124]
gi|431604529|gb|ELI73938.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE137]
gi|431634034|gb|ELJ02296.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE153]
gi|431644591|gb|ELJ12252.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE160]
gi|431659591|gb|ELJ26483.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE167]
gi|431670596|gb|ELJ36949.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE174]
gi|431729796|gb|ELJ93415.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE97]
gi|431734319|gb|ELJ97720.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE99]
gi|441710724|emb|CCQ08856.1| Enoyl-CoA hydratase [Escherichia coli Nissle 1917]
Length = 714
Score = 347 bits (891), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 234/715 (32%), Positives = 368/715 (51%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ D++ +V ++ F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKDLRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIANCKTAQEAEALARQGQQLMAE-IHALPVPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + +KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEQKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + LDVIE G+ G SG EA+ F EL M S+ L ++FFA K P +
Sbjct: 243 NYPATKRILDVIETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASTEVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIADIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R L+E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCLDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E + +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMSKRG 702
>gi|432340031|ref|ZP_19589553.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Rhodococcus
wratislaviensis IFP 2016]
gi|430774912|gb|ELB90476.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Rhodococcus
wratislaviensis IFP 2016]
Length = 687
Score = 347 bits (891), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 231/684 (33%), Positives = 346/684 (50%), Gaps = 30/684 (4%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D V ++T+ NPPVNA + + AGL E A + D+V AIVL G F G D+ F
Sbjct: 20 EDRVGVLTIDNPPVNASSAAVRAGLMSGLEVAEADDEVDAIVLIGASANFVSGSDLREF- 78
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+G V P+ + V+ IE KP+VAA+ G LGGG ELA+GC RIA +
Sbjct: 79 ----SGPV---PEPQLPSVIAAIEASAKPVVAALSGATLGGGFELALGCDGRIALAGGVV 131
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
GLPE+TLG+IPG TQR RLVG ++ +E++ + + E+ + GLID VVT +
Sbjct: 132 GLPEITLGMIPGAGGTQRPLRLVGPARTLELVTSGERLPVEQAHREGLIDEVVTGSLRAQ 191
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 248
R A R K +R+L ++ EV ++A ++ A PQ A + I
Sbjct: 192 AIRFAR---ALRGKRILRNLPVRG-----ADPGEVEQVATTALRRAA--RPQTVAAVGAI 241
Query: 249 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 308
G E F L S L H+FFA+RA K PR ++ V
Sbjct: 242 LMGGSAPADRAFQHERAEFNRLRNGTESSALRHLFFARRAALKANRPA----LPRELKSV 297
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
V+G G MG+GIA A + VVL + + + ++ +G+VTRG+LT+ A +
Sbjct: 298 GVVGAGTMGAGIARAFVEAGFPVVLVDQQRQAAAAAAERLQRTYQGMVTRGRLTESDAQH 357
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
L +L + ++ D+V+EAV E + +KQ + +LE PH LATNTS +D+N +
Sbjct: 358 HLSLLTAGTTIRDLEETDLVVEAVYEDLEVKQTVLRQLETVLRPHVPLATNTSYLDVNEI 417
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
+ R++G HFFSPAH +LEIVR E+TS + + +T K+++K+P++ G C G
Sbjct: 418 AAAVARPTRVLGMHFFSPAHRAAVLEIVRGEKTSTEALDVALTAAKVLEKMPILAGVCDG 477
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR + Y + L++ G ++D+A+ FG +GP + D++G +A K
Sbjct: 478 FIGNRIYNAYRRQCELMLEEGALPQQVDAALTEFGFAMGPLAVSDMSGLDIAWRMRKSKA 537
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIM 607
A R + D L + GR G+ G G Y YE GS+ P PD +V +IE+ + I
Sbjct: 538 GARDPRERYPDVADALCELGRFGQKTGDGWYHYEPGSRTPHPDSTVEALIEQSSQRKAIT 597
Query: 608 PGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFW 667
+ T + IV L + NE+ +L + I R SD+D LG FP++ GGI W
Sbjct: 598 RA----AFTSQGIVTRALVTMANEAALLLVDKIADRPSDIDLMLTLGYGFPTHEGGITHW 653
Query: 668 ADAVGANYVYTSLKKWSQLYGNFF 691
++ L + G+ F
Sbjct: 654 VGRQDRRFLEHELDALAARTGHGF 677
>gi|400260686|pdb|3ZWB|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
2trans-hexenoyl-coa
gi|400260687|pdb|3ZWB|B Chain B, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
2trans-hexenoyl-coa
Length = 742
Score = 347 bits (891), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 242/720 (33%), Positives = 384/720 (53%), Gaps = 52/720 (7%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A+I L NPPVNA++ ++ +++ ++A S VKAIV+ G G F G DI+ F
Sbjct: 31 LAMIRLCNPPVNAVSPTVIREVRNGLQKAGSDHTVKAIVICGANGNFCAGADIHGFS--- 87
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
+ P +++ +V+ I+ +KP++AA++G+ALGGGLELA+GCH RIA K ++GLP
Sbjct: 88 -----AFTPGLALGSLVDEIQRYQKPVLAAIQGVALGGGLELALGCHYRIANAKARVGLP 142
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS---EELLK 188
+TLG++PG TQ LPR+VG+ A++++ K ++++E +LG++DAVV S EE +K
Sbjct: 143 AVTLGILPGARGTQLLPRVVGVPVALDLITSGKYLSADEALRLGILDAVVKSDPVEEAIK 202
Query: 189 VS-RLWALDIAARR---KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 244
+ ++ I RR KP + SL V A + +K P + + C
Sbjct: 203 FAQKIIDKPIEPRRIFNKP----------VPSLPNMDSVFAEAIAKVRKQYPGVLAPETC 252
Query: 245 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK--- 301
+ I+ + H G+ +E K+F L ++ L + FFA+++ +K + K
Sbjct: 253 VRSIQASVKHPYEVGIKEEEKLFMYLRASGQAKALQYAFFAEKSANKWSTPSGASWKTAS 312
Query: 302 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 361
+ V V V+G G MG GIA + I VV E + + L K I + +R
Sbjct: 313 AQPVSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAH- 371
Query: 362 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 421
Q+ +A L+ E VD+V+EAV E + LK+K+F+EL C P L TNTS
Sbjct: 372 -QNGQASAKPKLRFSSSTKELSTVDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTS 430
Query: 422 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 481
++++ + T +IG HFFSPAHVM LLE++ + +S I +M++ K I K+ V
Sbjct: 431 ALNVDDIASSTDRPQLVIGTHFFSPAHVMRLLEVIPSRYSSPTTIATVMSLSKKIGKIGV 490
Query: 482 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVA- 540
VVGNC GF NR PY L+ G +D + FG +GPF++ DLAG V
Sbjct: 491 VVGNCYGFVGNRMLAPYYNQGFFLLEEGSKPEDVDGVLEEFGFKMGPFRVSDLAGLDVGW 550
Query: 541 ------AATSKEFDKAFPDR----SFQSPLVDLLLKSGRNGKANGKGLYTYEK--GSKPK 588
T P R S SPL D+L ++GR G+ GKG Y Y+K G K
Sbjct: 551 KIRKGQGLTGPSLPPGTPVRKRGNSRYSPLGDMLCEAGRFGQKTGKGWYQYDKPLGRIHK 610
Query: 589 PDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLD 648
PDP + + + R + +I + +++++EI+E L+ ++NE+ R+LEEG+ R +D
Sbjct: 611 PDPWLSTFLSQYREVHHI----EQRTISKEEILERCLYSLINEAFRILEEGMAARPEHID 666
Query: 649 DASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF--FKPSRFLEERATKGIP 706
+ G +P ++GG +F+A +VG V L+K+ + + +PS +L +G P
Sbjct: 667 VIYLHGYGWPRHKGGPMFYAASVGLPTVLEKLQKYYRQNPDIPQLEPSDYLRRLVAQGSP 726
>gi|301049101|ref|ZP_07196084.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
185-1]
gi|300299102|gb|EFJ55487.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
185-1]
Length = 714
Score = 347 bits (891), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 234/715 (32%), Positives = 368/715 (51%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ D++ +V ++ F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKDLRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIANCKTAQEAEALARQGQQLMAE-IHALPVPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVRLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + +KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEQKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + LDVIE G+ G SG EA+ F EL M S+ L ++FFA K P +
Sbjct: 243 NYPATKRILDVIETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASTEVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIADIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R L+E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCLDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E + +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMSKRG 702
>gi|126463937|ref|YP_001045050.1| 3-hydroxyacyl-CoA dehydrogenase [Rhodobacter sphaeroides ATCC
17029]
gi|126105748|gb|ABN78278.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Rhodobacter sphaeroides ATCC 17029]
Length = 655
Score = 347 bits (891), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 236/664 (35%), Positives = 343/664 (51%), Gaps = 39/664 (5%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DG+A++TL NPPVNAL + + L E + + V+A+VLT G F GG DI F +
Sbjct: 12 DGIALLTLANPPVNALGLAVRQRLTALTAELEADESVRAVVLTAEGRVFVGGADIAEFDR 71
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ +PDV + IE +KP +AA+ G ALGGG ELA+GCH RI A +LG
Sbjct: 72 PP---EAPHLPDV-----IAAIEASRKPWIAALNGAALGGGAELALGCHYRIFADTARLG 123
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE---EL 186
LPE +LG+IPG TQRLPR +GL+ AIE++ +++++ E + GL D + E E
Sbjct: 124 LPETSLGLIPGAGGTQRLPRRIGLAPAIEVITAGRTLSAAEAREAGLADRIAAGELIPEA 183
Query: 187 LKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVL-KLARLQAKKTAPNMPQHQACL 245
L +R LD A L R L++ AR + + A P A L
Sbjct: 184 LAFAR--TLDGA---------LPRPASAAPLADPGHAFWDEARARIARAARGNPAPTAAL 232
Query: 246 DVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGV 305
+ I G+ G +G+ E + F L D + L H+FFA+RA + + G++P +
Sbjct: 233 EAIRAGVAEGFAAGLRAERETFLRLRASDEAAALRHLFFAERAALRPAALR--GIEPVPL 290
Query: 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDK 365
+ VIGGG MGSGIA A + V L E E L G++ +EA V RG +
Sbjct: 291 TRAGVIGGGTMGSGIAAALAAAGLEVRLTETGPEALAAGLERVEAIFEAQVKRGLTDRAG 350
Query: 366 ANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL 425
A + + G + D D+VIEAV E + +K+++F EL + C P ILATNTS +D
Sbjct: 351 ATERMARVTGTVGLGALADCDLVIEAVFEDLAVKRRVFEELVRLCGPEAILATNTSYLDP 410
Query: 426 NIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 485
+ E R I HFFSPA VM LLEIV T+ +++ + + + K+PV GN
Sbjct: 411 ERIVEGLPHPHRFIALHFFSPAQVMKLLEIVPLAATAPRILATGVALAARLGKIPVQAGN 470
Query: 486 CTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSK 545
GF NR Y A L+ G ID A+R+FGL +GPF++ D+AG +A +
Sbjct: 471 GEGFIGNRILKRYRAEAEALLLAGATPTEIDEAMRAFGLGMGPFEMQDMAGLDIAFRARE 530
Query: 546 EFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLS 604
D + P D L+++GR G+ +G G Y Y GS+ P+P P +I
Sbjct: 531 AARALGQDLP-EGP-GDRLVRAGRLGRKSGGGWYDYAPGSRLPQPSPEAAALIAPL---- 584
Query: 605 NIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGI 664
+ PG +P + EI + ++ + E R+ +EG+ SD+D V G FP ++GG
Sbjct: 585 -VTPGARP---SGTEIADRLIAAMAEEGQRICDEGLAQSPSDIDLVEVHGYGFPRHKGGP 640
Query: 665 VFWA 668
+F A
Sbjct: 641 MFHA 644
>gi|407699429|ref|YP_006824216.1| multifunctional fatty acid oxidation complex subunit alpha
[Alteromonas macleodii str. 'Black Sea 11']
gi|407248576|gb|AFT77761.1| multifunctional fatty acid oxidation complex subunit alpha
[Alteromonas macleodii str. 'Black Sea 11']
Length = 713
Score = 347 bits (891), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 248/708 (35%), Positives = 373/708 (52%), Gaps = 36/708 (5%)
Query: 7 TMEVGNDGVAIITL--INPPVNALAIPI---VAGLKDKFEEATSRDDVKAIVLT-GNGGR 60
T+ ++GVAI+++ + +N L ++ + D E +S +K +VLT G
Sbjct: 13 TLTKQDNGVAILSMDVLGESMNTLKAEFGDEISAMLDDIERDSS---IKGVVLTSGKPSS 69
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
F G DI + A D + + + + + IE+ K VAA+ G ALGGGLELA+ C
Sbjct: 70 FVAGADITMLAACKTAEDATTIA-AGGQAIFDRIENMKATFVAAIHGPALGGGLELALAC 128
Query: 121 HARIA--APKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLG 175
H R+ +P TQLGLPE+ LG++PG TQRLPRL+G+ +A++MML +++ K G
Sbjct: 129 HYRVCTDSPSTQLGLPEVQLGLLPGSGGTQRLPRLIGIQQAMKMMLTGAPARAKQAKKYG 188
Query: 176 LIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRT--DK-LGSLSEAREVL-KLARLQA 231
++D VV LLKV+ +AL +RKP + ++ DK L R ++ K AR
Sbjct: 189 IVDDVVPHSVLLKVAEQFAL----KRKPEREAPQKSVMDKVLEKTGPGRSMMFKKAREAT 244
Query: 232 -KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATS 290
KT N P +DVIE G+ G +G+ EA+ F +LVM S L +FFA
Sbjct: 245 FAKTKGNYPAPGYIIDVIETGMNDGMKAGLKAEAEAFGKLVMTPESFQLRQIFFATTEMK 304
Query: 291 KVPNVTDIGLKPRGVRKVAVIGGGLMGSGIA-TAHILNNIYVVLKEVNSEYLLKGIKTIE 349
K V G+KP + KV V+GGGLMG GIA + V +K+V +E + +K
Sbjct: 305 KENGVE--GVKPEKMNKVGVLGGGLMGGGIAYVTSTKAGVPVRIKDVRAEGIANAMKYSY 362
Query: 350 ANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKA 409
+ V + + + L +L G LDYS ++D D+V+EAV E + LKQK+ +++E+
Sbjct: 363 DILNKKVKKRFMRNSEMQKQLALLTGTLDYSGYQDADIVVEAVFEDLDLKQKMVADIEEN 422
Query: 410 CPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDL 469
C I A+NTS+I + + K + + +IG H+FSP MPL E++ ++TS QVI
Sbjct: 423 CKESTIFASNTSSIPITQIAAKAARPENVIGLHYFSPVDKMPLAEVIAHDKTSDQVISST 482
Query: 470 MTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 529
+ K K PVVV + GF VNR PY A L+ G + ID ++ FG P+GP
Sbjct: 483 VEFAKKQGKTPVVVKDGAGFYVNRILAPYMNEAANLILDGEPIEHIDKSLVKFGFPVGPV 542
Query: 530 QLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKP 589
+LLD G V +AF +R D +L GR GK N KG Y+YE G KP
Sbjct: 543 KLLDEVGIDVGTKIIPFLVEAFGERFTAPSAFDKVLADGRKGKKNQKGFYSYE-GKKPGK 601
Query: 590 DPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
+ + E L + P K ++EKE+ E + ++NE+ R L+EG++ A D D
Sbjct: 602 E-----VDESIYELLGLSPSAK---LSEKEVAERCVLMMLNEAARCLDEGVIRSARDGDI 653
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 697
++ G+ FP + GG + D +G +V L ++ G+ F P+ L
Sbjct: 654 GAIFGIGFPPFLGGPFRYMDTLGIKHVVARLNHYATAVGDKFAPAEVL 701
>gi|407686989|ref|YP_006802162.1| multifunctional fatty acid oxidation complex subunit alpha
[Alteromonas macleodii str. 'Balearic Sea AD45']
gi|407290369|gb|AFT94681.1| multifunctional fatty acid oxidation complex subunit alpha
[Alteromonas macleodii str. 'Balearic Sea AD45']
Length = 713
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 250/708 (35%), Positives = 373/708 (52%), Gaps = 36/708 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPI---VAGLKDKFEEATSRDDVKAIVLT-GNGGR 60
T+ ++GVAI+++ P +N L ++ + D E +S +K +VLT G
Sbjct: 13 TLTKQDNGVAILSMDVPGESMNTLKAEFGDEISAMLDDIERDSS---IKGVVLTSGKPSS 69
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
F G DI + A D + + + + + IE+ K VAA+ G ALGGGLELA+ C
Sbjct: 70 FVAGADITMLAACKTAEDATTIA-AGGQAIFDRIENMKATFVAAIHGPALGGGLELALAC 128
Query: 121 HARIA--APKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLG 175
H R+ +P TQ+GLPE+ LG++PG TQRLPRL+G+ +A++MML +++ K G
Sbjct: 129 HYRVCTDSPSTQVGLPEVQLGLLPGSGGTQRLPRLIGIQQAMKMMLTGSPARAKQAKKYG 188
Query: 176 LIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRT--DK-LGSLSEAREVL-KLARLQA 231
++D VV LLKV+ +AL +RKP + ++ DK L R ++ K AR
Sbjct: 189 IVDEVVPHSVLLKVAEQFAL----KRKPEREAPQKSVMDKVLEKTGPGRNMMFKKAREAT 244
Query: 232 -KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATS 290
KT N P +DVIE G+ G +G+ EA+ F +LVM S L +FFA
Sbjct: 245 FAKTKGNYPAPGYIIDVIETGMNEGMKAGLKAEAEAFGKLVMTPESFQLRQIFFATTEMK 304
Query: 291 KVPNVTDIGLKPRGVRKVAVIGGGLMGSGIA-TAHILNNIYVVLKEVNSEYLLKGIKTIE 349
K V G+KP ++KV V+GGGLMG GIA + V +K+V +E + +K
Sbjct: 305 KENGVE--GVKPEKMKKVGVLGGGLMGGGIAYVTSTKAGVPVRIKDVRAEGIANAMKYSY 362
Query: 350 ANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKA 409
+ V + + + L +L G LDYS ++D D+V+EAV E + LKQK+ +++E+
Sbjct: 363 DILNKKVKKRFMRNSEMQKQLALLTGTLDYSGYQDADIVVEAVFEDLDLKQKMVADIEEN 422
Query: 410 CPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDL 469
C I A+NTS+I + + K + + +IG H+FSP MPL E++ ++TS QVI
Sbjct: 423 CKESTIFASNTSSIPITQIAAKAARPENVIGLHYFSPVDKMPLAEVIAHDKTSDQVISST 482
Query: 470 MTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 529
+ K K PVVV + GF VNR PY A L+ G + ID ++ FG P+GP
Sbjct: 483 VEFAKKQGKTPVVVKDGAGFYVNRILAPYMNEAANLILDGEPIEHIDKSLVKFGFPVGPV 542
Query: 530 QLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKP 589
+LLD G V +AF +R D +L GR GK N KG Y+YE KP
Sbjct: 543 KLLDEVGIDVGTKIIPFLVEAFGERFTAPSAFDKVLADGRKGKKNQKGFYSYE---SKKP 599
Query: 590 DPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
V I E LS P K ++EKE+ E + ++NE+ R L+EG++ A D D
Sbjct: 600 GKEVDESIYELLGLS---PSAK---LSEKEVAERCVLMMLNEAARCLDEGVIRNARDGDI 653
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 697
++ G+ FP + GG + D +G +V L ++ G+ F P+ L
Sbjct: 654 GAIFGIGFPPFLGGPFRYMDTLGIKHVVARLNHYATAVGDKFAPAEVL 701
>gi|403270077|ref|XP_003927023.1| PREDICTED: peroxisomal bifunctional enzyme isoform 1 [Saimiri
boliviensis boliviensis]
Length = 723
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 238/722 (32%), Positives = 381/722 (52%), Gaps = 49/722 (6%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
++ +A+I NPPVNA+++ ++ +++ ++A + +KAIV+ G G+FS G DI+ F
Sbjct: 8 HNALALIRFRNPPVNAISMALLREIEEGLQKAVTDHTIKAIVICGAEGKFSAGADIHGFS 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
G +S+ VV+ I+ KP+VAA++G+ALGGGLELA+GCH RIA + Q+
Sbjct: 68 APRTLG-------LSLGSVVDEIQRNVKPVVAAIQGMALGGGLELALGCHYRIAHAEAQV 120
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
GLPE+TLG++PG TQ LPRL+G+ A++++ + I + E KLG++D VV S+ L +
Sbjct: 121 GLPEVTLGLVPGARGTQLLPRLIGVPAALDLITTGRYILAGEALKLGILDKVVNSDPLEE 180
Query: 189 VSRLWALDIAARR---KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACL 245
R A+R +P + SL + A L+ +K P +AC+
Sbjct: 181 AIRF------AQRVSDQPLESRRLFNKPIPSLPNMDTIFSEALLKMRKQHPGCLAQEACV 234
Query: 246 DVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK---P 302
++ + + G KE ++F+ L+ +R L + F A+R +K + + K
Sbjct: 235 RAVQAAVQYPYEVGSKKEEELFQYLLQSGQARALQYAFLAERKANKWSSPSGASWKTASA 294
Query: 303 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 362
+ + V V+G G MG GI + I V+ + + L K I + + ++
Sbjct: 295 QPISSVGVVGLGTMGRGIVISFARAGIPVIAVDSDKNQLATANKIITSVLEKEASK---- 350
Query: 363 QDKANNALKMLKGVLDYS--EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 420
++ +A K L S E VD+VIEAV E + LK+++F+EL C P L TNT
Sbjct: 351 MQQSGHAWSGPKPRLTSSMKELGGVDLVIEAVFEDMSLKKQVFAELSAVCKPEAFLCTNT 410
Query: 421 STIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVP 480
S +D++ + TS +IG HFFSPAH+M LLE++ + +S I +M + K IKK+
Sbjct: 411 SALDVDELASSTSRPHLVIGTHFFSPAHIMKLLEVIPSRYSSPTTIATVMNLSKKIKKIG 470
Query: 481 VVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVA 540
VVVGNC GF NR PY L+ G +D + FG +GPF++ DLAG V
Sbjct: 471 VVVGNCFGFVGNRMLNPYYNQTYFLLEEGSKPEEVDQVLEEFGFKMGPFRVSDLAGLDVG 530
Query: 541 AATSKEFDKAFP------------DRSFQSPLVDLLLKSGRNGKANGKGLYTYEK--GSK 586
+ K P +R + P+ D+L + GR G+ GKG Y Y+K G
Sbjct: 531 WKSRKGQGLTGPTLPPGTPARKRGNRRY-CPIPDVLCELGRFGQKTGKGWYQYDKPLGRI 589
Query: 587 PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASD 646
KPDP + + + R +I +P ++ EI+E L+ ++NE+ R+L EGI
Sbjct: 590 HKPDPWLSTFLSQYRETHHI----EPRIISRDEILERCLYSLINEAFRILGEGIAASPEH 645
Query: 647 LDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF--FKPSRFLEERATKG 704
+D + G +P +RGG +F+A VG V L+K+ + + +PS +L++ A++G
Sbjct: 646 IDVVYLHGYGWPRHRGGPMFYASTVGLPTVLEKLQKYYRQNPDIPQLEPSDYLKKLASQG 705
Query: 705 IP 706
P
Sbjct: 706 NP 707
>gi|336449981|ref|ZP_08620438.1| fatty oxidation complex, alpha subunit FadJ [Idiomarina sp. A28L]
gi|336283138|gb|EGN76345.1| fatty oxidation complex, alpha subunit FadJ [Idiomarina sp. A28L]
Length = 709
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 258/715 (36%), Positives = 381/715 (53%), Gaps = 40/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
+++V ++G+ IIT+ P +N L + E S D+K +V ++G F
Sbjct: 10 SLDVRDNGIGIITIDVPGESMNTLKSTFADEVAKLMETIESNRDLKGLVFISGKPSSFVA 69
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DI + + A D + + + + IE K P+VAA+ G ALGGGLELA+ CH R
Sbjct: 70 GADIRMINECETAADAESLARQG-QALFDRIEALKIPVVAAIHGPALGGGLELALACHVR 128
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ + PKT LGLPE+ LG++PG TQRLPRLVG+ +A+ +ML K + +++ K+GL D
Sbjct: 129 VVSDSPKTVLGLPEVQLGLLPGSGGTQRLPRLVGVQQALTLMLTGKQLRAKQALKMGLAD 188
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAP-N 237
+V LL+ + AL + K +L G LS + K AR QA+K A N
Sbjct: 189 EMVPQSILLEAAVEQALKGKRKAKKPKLNLFSKVLEGPLSSI--LYKKAREQAQKKAHGN 246
Query: 238 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 297
P +D + +G+ G +G+ EAK F EL M D S L ++FFA T+++ T
Sbjct: 247 YPAIDKIIDTVAQGMNKGMKAGLAYEAKQFGELAMSDVSYQLRNIFFA---TTEIKKETG 303
Query: 298 I-GLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEANVRGL 355
G+KP V+K V+GGGLMG GIA I + V LK++N E GIK A L
Sbjct: 304 ADGVKPEAVKKAGVLGGGLMGGGIAHVTISKAKVPVRLKDINQE----GIKNALAYHHKL 359
Query: 356 ----VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACP 411
V R + + + ML G +DYS FKD D+VIEAV E + LKQK+ +++EK
Sbjct: 360 LLPKVKRKIIRPTELQQQMLMLTGTVDYSGFKDTDIVIEAVFEDLDLKQKMVADIEKNAA 419
Query: 412 PHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMT 471
H I ATNTS++ + + K + +++IG H+FSP MPL EI+ E TS + I +
Sbjct: 420 EHTIFATNTSSLPITQIAAKAARPEQVIGLHYFSPVEKMPLAEIITHEGTSKETIATTVE 479
Query: 472 VGKIIKKVPVVVGNCTGFAVNRAFFPY-SQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 530
K K PVVV + GF VNR PY +++ARLL++ G + +D FG P+GP
Sbjct: 480 FAKRQGKTPVVVKDGAGFYVNRILAPYMNEAARLLLA-GEPIEVLDKTFVKFGFPVGPIT 538
Query: 531 LLDLAGYGVAAATSKEFDKAFPDRSFQSP-LVDLLLKSGRNGKANGKGLYTYEKGSKPKP 589
LLD G VA + A +R F++P + LL GR G+ + KG Y Y+ K K
Sbjct: 539 LLDEVGIDVAGKVAPILTDALGER-FRAPNAFNKLLDDGRKGRKSKKGFYLYDGKKKGKH 597
Query: 590 -DPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLD 648
D SV +I I P S+ E++E + P++NE+ L++ I+ D D
Sbjct: 598 VDSSVYQVI-------GISPSA---SLAADEMIERCVLPMLNEAAWCLQDDIIRSPRDGD 647
Query: 649 DASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATK 703
++ G+ FP +RGG + D++G V L+ +++ G+ FKP L E A +
Sbjct: 648 IGAIFGIGFPPFRGGPFRYMDSLGIANVVARLQHYAEKEGDRFKPCDLLIEMAAE 702
>gi|343514105|ref|ZP_08751187.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
sp. N418]
gi|342800771|gb|EGU36282.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
sp. N418]
Length = 704
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 227/718 (31%), Positives = 376/718 (52%), Gaps = 30/718 (4%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEE-ATSRDDVKAIVL-TGNG 58
+ A +T++ N I + N +N L ++ F E + +K +++ +G
Sbjct: 4 LKAFNLTIDEQNIAWLCIDVPNEKMNTLQAAFADEMESVFAELEQHKSALKGLIIHSGKP 63
Query: 59 GRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAM 118
F G D+ + A + + E+ L P+VAA+ G LGGGLELA+
Sbjct: 64 DNFVAGADVRMLDACQSAQEAQALATKGQEMFEKL-SKLSFPVVAAIHGPCLGGGLELAL 122
Query: 119 GCHARIAAP--KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWK 173
C R+ + KT+LGLPE+ LG++PG TQRLPRL+GL +++++L K + +++ K
Sbjct: 123 ACDYRVCSDDDKTRLGLPEVQLGLLPGSGGTQRLPRLIGLLPSLDLILTGKQLRAKKAKK 182
Query: 174 LGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVL--KLARLQA 231
LG++DA V LL+V++ + + + K + + + R+V+ + A+
Sbjct: 183 LGVVDACVAPTILLEVAKQF---VEGKDKAKHKVSTKEKLMAQTGFGRKVIFEQAAKKTQ 239
Query: 232 KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 291
+KT N P +A L+VI G+ HG G+ EA+ F ELVM + S+ L +FFA T++
Sbjct: 240 QKTRGNYPATEAILEVIRYGLEHGFTKGLAYEAERFGELVMSNESKALRSIFFA---TTE 296
Query: 292 VPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEA 350
+ +P V+++AV+GGGLMG+GI+ + + V +K+V+++ +L +
Sbjct: 297 MKKEHGSDAEPSSVKRIAVLGGGLMGAGISHVTVAKAKVPVRIKDVSNDGVLNALNYNFK 356
Query: 351 NVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKAC 410
R L++ + + ++ L G +D+ F D+VIEAV E + LKQ++ +++E+
Sbjct: 357 LFEKQRKRRILSKAQLQSKMQQLSGGIDFISFNHTDVVIEAVFEDLALKQQMVADIEQNA 416
Query: 411 PPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLM 470
P I ATNTS++ ++ + E+ + + +IG H+FSP MPL+E++ + TSAQ I ++
Sbjct: 417 KPDTIFATNTSSLPIHQIAEQAARPENVIGLHYFSPVEKMPLVEVIPHQTTSAQTISTVV 476
Query: 471 TVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 530
+ + K P+VV +C GF VNR PY A ++ G + ++D A+ G P+GP
Sbjct: 477 ELARKQGKTPIVVKDCAGFYVNRILAPYMNEAAHILLTGEPIEQLDGALLDAGFPVGPIT 536
Query: 531 LLDLAGYGVAAATSKEFDKAFPDRSFQSPLV-DLLLKSGRNGKANGKGLYTYEKGSKPKP 589
LLD G + A R FQ P V D LLK GR G+ +GKG YTY KG +
Sbjct: 537 LLDEVGVDIGAKIMPILVNELGPR-FQGPAVFDTLLKDGRKGRKSGKGFYTY-KGKDKQV 594
Query: 590 DPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
D SV +L N+ P K + +E+ L P++NE+ R L+EGI+ D D
Sbjct: 595 DKSVY-------KLLNLTPESK---MASQEMAMRCLLPMLNEAVRCLDEGIIRSPRDGDI 644
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPL 707
++ G+ FP + GG + D +G + + + + YG F P L RA+ P
Sbjct: 645 GAIFGIGFPPFLGGPFRYMDQIGIVKLVEIMNEHAAKYGERFAPCDGLLTRASLNAPF 702
>gi|410970845|ref|XP_003991887.1| PREDICTED: peroxisomal bifunctional enzyme [Felis catus]
Length = 723
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 241/725 (33%), Positives = 383/725 (52%), Gaps = 55/725 (7%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+ +A+I L NPPVNA++ ++ G+K+ ++A + VKAIV+ G G+FS G DI+ F
Sbjct: 8 QNWLALIRLRNPPVNAISTSVLHGIKEGLQKAVTDHTVKAIVICGADGKFSAGADIHGF- 66
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
P + + VV+ I+ +KP+VAA++G+ALGGGLELA+GCH RIA + Q+
Sbjct: 67 ------TAPRKPTIVLGHVVDEIQRNEKPVVAAIQGMALGGGLELALGCHYRIAHAEAQI 120
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS---EE 185
G PE+ LG++PG TQ LPRL+G+ A++++ + I ++E KLG++D +V S EE
Sbjct: 121 GFPEVRLGLLPGARGTQLLPRLIGVPAALDLITSGRHILADEALKLGILDEMVNSDPVEE 180
Query: 186 LLKVS-RLWALDIAARR---KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 241
+K++ R+ + +RR KP I+SL D E+ A L+ +K P
Sbjct: 181 AIKLAQRISGQSLESRRLCNKP-IQSLPNMD---------EIFSEALLKMRKQHPGCLSQ 230
Query: 242 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 301
+ C+ ++ + + G+ KE ++F L ++ L + FFA+R +K + K
Sbjct: 231 ETCVRAVQAAVQYPYEVGIKKEEELFMYLQKSGQAQALQYAFFAERKANKWSAPSGASCK 290
Query: 302 ---PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTR 358
+ + V V+G G MG GI + I V+ E++ K ++T + + ++ +
Sbjct: 291 TASAQPISSVGVVGLGTMGRGIVISFAKAKIPVIAVELDK----KQLETADGIITSVLEK 346
Query: 359 GKLTQDKANNALKMLKGVLDYS--EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
+++ K L S E VD+VIEAV E + LK+++F+EL C P L
Sbjct: 347 EASKMQHSSHHWSGPKPRLTTSMKELGGVDLVIEAVFEEINLKKQVFAELSAVCKPETFL 406
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
TNTST+D++ + T +IG HFFSPAH+M LLEI+ ++ +S I +M + K I
Sbjct: 407 CTNTSTLDIDEIASSTDRPHLVIGTHFFSPAHIMRLLEIIPSQYSSLTTIATVMNLSKKI 466
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
KK+ VVVGNC GF NR Y + L+ G ID + FG IGPF++ DL+G
Sbjct: 467 KKIGVVVGNCKGFVGNRMLKHYYNQSYFLLEEGSKPEEIDQVLEEFGFKIGPFRVSDLSG 526
Query: 537 YGVA-------AATSKEFDKAFPDR----SFQSPLVDLLLKSGRNGKANGKGLYTYEK-- 583
V T P R P+ D+L + GR G+ GKG Y Y+K
Sbjct: 527 LDVGWKCRQGEGLTGPTLPPGTPARKRGNERYCPIPDMLYELGRFGQKTGKGWYQYDKPL 586
Query: 584 GSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVR 643
G KPDP + + + R +I +P ++ EI+E L+ ++NE+ R+L EGI
Sbjct: 587 GRIHKPDPWLSEFLSQYRETYHI----EPRIISRDEILERCLYSLINEAFRILGEGIAAT 642
Query: 644 ASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF--FKPSRFLEERA 701
+D + G +P + GG +F+A VG V L+K+ + + +P +L++ A
Sbjct: 643 PEHIDVVYLYGYGWPRHVGGPMFYASTVGLPTVLEKLQKYYRQNLDIPQLEPCDYLKKLA 702
Query: 702 TKGIP 706
+ G P
Sbjct: 703 SLGNP 707
>gi|331673841|ref|ZP_08374604.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TA280]
gi|331069114|gb|EGI40506.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TA280]
Length = 714
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 231/713 (32%), Positives = 366/713 (51%), Gaps = 33/713 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ D++ +V ++ F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKDLRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIANCKTAQEAEALARQGQQLMAE-IHALPVPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPQSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+VIE G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVIENGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDRQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDAS 651
++ P+I G+ ++ ++ E + ++NE+ R L+E ++ D D +
Sbjct: 600 AIFPLI-------GTQGQGR---LSAPQVAERCVMLMLNEAVRCLDEQVIRSVRDGDIGA 649
Query: 652 VLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
V G+ FP + GG + D++GA V +++ + YG+ F P L E + +G
Sbjct: 650 VFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMSKRG 702
>gi|328544778|ref|YP_004304887.1| hypothetical protein SL003B_3161 [Polymorphum gilvum SL003B-26A1]
gi|326414520|gb|ADZ71583.1| Putative trifunctional protein [Polymorphum gilvum SL003B-26A1]
Length = 691
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 239/679 (35%), Positives = 346/679 (50%), Gaps = 46/679 (6%)
Query: 3 APRVTMEVGNDG----VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNG 58
A RV +E + G +A++T+ PPVNA + + +K F E + VLTG G
Sbjct: 7 AGRVHVERRSHGAAGTIAVVTIDFPPVNAGSKAMREAVKAAFVEIGVDGTLAGAVLTGAG 66
Query: 59 GRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAM 118
G F GG DI F D P E V+ IE C P+VAA++G ALGGG ELA+
Sbjct: 67 GNFVGGADIREF-------DAPAQPPHLPE-VIAAIEACPFPVVAAIDGAALGGGYELAL 118
Query: 119 GCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLG 175
GC AR+A PK +GLPE+TLG+IPG T RL RLV ++AIE++ + + + E LG
Sbjct: 119 GCDARVATPKAVVGLPEVTLGLIPGAGGTLRLSRLVDEARAIELVTSGRRVKAAEALDLG 178
Query: 176 LIDAVVTSEEL-LKVSRLWALDIAARR---KPWIRSLHRTDKLGSLSEAREVLKLARLQA 231
L+DAV + + V+ L L RR +P + S A ++ A +A
Sbjct: 179 LVDAVANGDLIEAAVTHLATLGGQKRRLRDQPVV------------SCAPAAVERAATEA 226
Query: 232 KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 291
K A + I + + + +E + L S+ L H+FFA++A K
Sbjct: 227 TKKGRGAEAVAAAITAIRDSVTLPVDEALARERETSLRLRREPQSQALRHLFFAEKAAMK 286
Query: 292 VPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEAN 351
+P G P VR V V+G G MG GI A V L E + L G+ I
Sbjct: 287 LPE----GATPLSVRTVGVVGAGRMGQGIVLAFARRGFTVHLAERDPSVLAAGLSAIGET 342
Query: 352 VRGLVTRGKLTQDKANNALKMLKGVL--DYSEFKDVDMVIEAVIESVPLKQKIFSELEKA 409
L G++ +A +++ VL D D D+V+EA+ E + K+ +F EL+K
Sbjct: 343 AASLEAEGRIP-----SAAALMETVLGGDVPAMADCDLVVEAIFEDMDAKKALFGELDKL 397
Query: 410 CPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDL 469
P ILATNTS +D+N + T+ +R+ G HFF+PAHVM L+E+VR +RTS + + L
Sbjct: 398 LPETAILATNTSYLDINEIAAATARPERVGGLHFFNPAHVMRLIEVVRADRTSLETLSTL 457
Query: 470 MTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 529
+ VG+ I K+PVV GF NR F Y + L+ G +D A+R+FG+ +GPF
Sbjct: 458 LDVGRRIGKLPVVARVGEGFIGNRIFAAYREQCEFLIEEGAYPQDVDRAMRAFGMAMGPF 517
Query: 530 QLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKP 589
+ DLAG ++ A K ++ + D L ++GR G+ G G Y Y GS+
Sbjct: 518 AVFDLAGLDISWARRKRLAPLRDPKNRYVEIADRLCEAGRFGRKTGMGWYLYPPGSRGDV 577
Query: 590 DPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
DP V +IE C I+ ++ + EI +L +VNE+ +L EGI RASD+D
Sbjct: 578 DPQVTAVIEACAASKGIV----RRTIPDDEIRARLLASMVNEAALLLGEGIAERASDVDL 633
Query: 650 ASVLGMSFPSYRGGIVFWA 668
V G FP+ +GG + WA
Sbjct: 634 VLVNGYGFPALKGGPLHWA 652
>gi|288934205|ref|YP_003438264.1| fatty acid oxidation complex subunit alpha FadJ [Klebsiella
variicola At-22]
gi|288888934|gb|ADC57252.1| fatty acid oxidation complex, alpha subunit FadJ [Klebsiella
variicola At-22]
Length = 714
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 235/715 (32%), Positives = 369/715 (51%), Gaps = 38/715 (5%)
Query: 8 MEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGG 64
+EV D +A+IT+ P +N L ++ + V+ +V ++ F G
Sbjct: 9 LEVRADKIAVITIDAPGEKMNTLKAEFGNQVRGLIRQVRDDKSVRGVVFISAKADNFIAG 68
Query: 65 FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
DIN+ + A + + +++ I P++AA+ G LGGGLELA+ CH RI
Sbjct: 69 ADINMIARCRSAQEAEALARQGQQIMAE-IHGLSIPVIAAIHGACLGGGLELALACHGRI 127
Query: 125 AA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDA 179
+ KT+LGLPE+ LG++PG TQRLPRL+G+S A++MML + + + + K GL+D
Sbjct: 128 CSDDEKTRLGLPEVQLGLLPGSGGTQRLPRLIGVSTALDMMLTGRQLRARQALKAGLVDE 187
Query: 180 VVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLK--LARLQAKKTAPN 237
VV LL+ A+++A + +P R + +++ + R +L + + +KT N
Sbjct: 188 VVPQAILLQA----AVELALKGRPASRDMPVRERVLAGPLGRHLLFHFVGKQTQRKTQGN 243
Query: 238 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 297
P + L V+E G+ HG SG +EA+ F EL M S+ L +FFA K D
Sbjct: 244 YPAVKRILQVVENGLTHGCSSGYAEEARAFGELAMTPQSQALRSIFFASTDLKK-----D 298
Query: 298 IGLK--PRGVRKVAVIGGGLMGSGIATAHILNN-IYVVLKEVNSEYLLKGIKTIEANVRG 354
G + P + +AV+GGGLMG GIA + V +K++ + +K +
Sbjct: 299 RGAEAEPGPLTSIAVLGGGLMGGGIAYVTACKGGLPVRIKDIQPRGINHALKYSWELLNK 358
Query: 355 LVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHC 414
V + +L + + + M+ G DY F D+VIEAV E + LKQ++ SE+E+ C P
Sbjct: 359 QVRQRRLRPSERDRQMAMISGATDYQGFAHRDVVIEAVFEDLALKQRMVSEVEQYCGPQT 418
Query: 415 ILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGK 474
I A+NTS++ + + + R+IG HFFSP MPL+E++ + T Q I ++ + K
Sbjct: 419 IFASNTSSLPIGDIAAQARRPGRVIGLHFFSPVEKMPLVEVIPHKGTDPQAIATVVQLAK 478
Query: 475 IIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDL 534
K P+VV + GF VNR PY A L+ G V ID A+ FG P+GP QLLD
Sbjct: 479 RQGKTPIVVADKAGFYVNRILAPYINEAMRLLVEGEPVEEIDKALVKFGFPVGPIQLLDE 538
Query: 535 AGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTYE---KGSKPKP 589
G ++AF +R F P ++D +LK R G+ N +G Y YE + SK +P
Sbjct: 539 VGIDTGTKIIPVLERAFGER-FSPPANIIDAILKDDRKGRKNNRGFYLYETKGRKSKKRP 597
Query: 590 DPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
DP+V P++ R S + + +++ E + ++NE+ R +E I+ A D D
Sbjct: 598 DPAVYPLLGIDRPQSRL---------SAQQVAERCVMMMLNEAARCFDEQIIRSARDGDI 648
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D +GA V L++ + YG F P L A +G
Sbjct: 649 GAVFGIGFPPFLGGPFRYMDTIGAGEVAAILQRLAAQYGPRFTPCDTLLRMAEQG 703
>gi|430005907|emb|CCF21710.1| Peroxisomal bifunctional enzyme [Includes: Enoyl-CoA
hydratase/3,2-trans-enoyl-CoA isomerase ;
3-hydroxyacyl-CoA dehydrogenase] [Rhizobium sp.]
Length = 658
Score = 346 bits (888), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 230/663 (34%), Positives = 348/663 (52%), Gaps = 32/663 (4%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+DGV ++T+ NPPVNAL+ + AGL + A + +++TG G F GG DI F
Sbjct: 17 HDGVLVVTIDNPPVNALSADVRAGLVAALDRAGGDAGILGLLITGAGKTFIGGADIREF- 75
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
G P++ V+ IE KP VAA+ G ALGGGLE+A+GCH R+A+ TQ+
Sbjct: 76 -----GQPPAEPNLPT--VIERIEHSAKPTVAAINGAALGGGLEVALGCHYRVASSATQM 128
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
GLPE+ LG++PG TQRLPRL+G+ +I+++ +S+ ++E +LGLID + +
Sbjct: 129 GLPEVKLGIVPGAGGTQRLPRLIGIPASIDLIGSGRSVKAKEAHELGLIDEIADAG---- 184
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLG---SLSEAREVLKLARLQAKKTAPNMPQHQACL 245
L +AA R+ + RT +L + S A E K R+ AK P L
Sbjct: 185 ---LQEAALAAVRRNTGQDPRRTGQLAVPATDSAAVEKAK-TRILAKARGQQAPAQAVRL 240
Query: 246 DVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGV 305
E G+ E F +L + L HVFF +R SKV ++ G+ PR V
Sbjct: 241 ---VEAAARPLAEGMADERATFLKLRESSEAAALRHVFFGERQASKVEDLE--GVSPRPV 295
Query: 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDK 365
+ ++G GLMGSGIA A + V+ + + E +G + I ++ ++ ++ Q
Sbjct: 296 ETIGIVGLGLMGSGIAVAALAAGYRVIGLDRDDEAAARGGERILGLLQKNLSARRIDQTA 355
Query: 366 ANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL 425
+ L ++ D+VIEAV + + +K +F L+K P ILATNTS ++
Sbjct: 356 FDAQETRLSVTAADADLALCDLVIEAVFDDLGVKIDLFRRLDKVIRPDAILATNTSYLNP 415
Query: 426 NIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 485
+ + T+ +R++G HFFSPAHVM LLE+VR RT+ V+ + V K ++K+ +V G
Sbjct: 416 DEIAAATAHPERVLGLHFFSPAHVMRLLEVVRCARTAPDVLATGLAVAKRLRKLAIVTGV 475
Query: 486 CTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSK 545
GF N F Y + A L+ G ID+A+ +G P+G F + D+AG +A A K
Sbjct: 476 TEGFIGNSIFSAYRREAEFLLEDGALPHEIDAALEDYGFPMGLFAVYDMAGLDIAWARRK 535
Query: 546 EFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSN 605
+ D L ++GR G+ G+G Y Y +G K + DP V II +CR
Sbjct: 536 RQAVTRDPSERYVEIADRLCEAGRLGQKAGRGWYAYPEG-KRQVDPVVTEIIAQCRASKG 594
Query: 606 IMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIV 665
I P S T EIV+ +L + E ++LE+GI R SD+D + G FP+++GG +
Sbjct: 595 IT----PRSFTATEIVDRLLAAMAAEGRKLLEDGIAARESDIDLVMINGYGFPAHKGGPM 650
Query: 666 FWA 668
F A
Sbjct: 651 FAA 653
>gi|66519936|ref|XP_393806.2| PREDICTED: trifunctional enzyme subunit alpha, mitochondrial-like
[Apis mellifera]
Length = 764
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 240/724 (33%), Positives = 371/724 (51%), Gaps = 49/724 (6%)
Query: 13 DGVAIITLINPPV--NALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++TL +P V N L ++ + D + V +I+ ++G G F G DIN+
Sbjct: 48 DNVAVLTLDSPGVKMNILNSEVMYEIDDVLKNIEQNSAVNSIIFISGKPGCFIAGADINM 107
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA--P 127
+ D + + IE KKPIVAA++G LGGGLELAM CH RIA
Sbjct: 108 IRSFKTPED-GYKVAFEAQKIFEKIEKSKKPIVAAIQGSCLGGGLELAMACHYRIAVNDQ 166
Query: 128 KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVV--- 181
KT LGLPE+ LG++PG TQRLP+LV LS ++ M+L K + + + K+GL+D +V
Sbjct: 167 KTSLGLPEVMLGILPGAGGTQRLPQLVSLSNSLNMILTGKQVKAIKAKKIGLVDLLVNCL 226
Query: 182 -----TSEE-LLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEA------------REV 223
TSEE ++ A+ +A ++R K +LS+ +V
Sbjct: 227 GCGIGTSEENTMRYLEETAIKVAQDITNKTLKINRDSK--TLSDKFMNYVLHFDFVKDQV 284
Query: 224 LKLARLQAK-KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHV 282
LA+ + K KT P LDV+ + G EAK F EL + +GL ++
Sbjct: 285 FNLAKEKVKQKTGSLYPAPFKILDVMRISLNKESKLGYEAEAKAFGELGVTPQCKGLTNL 344
Query: 283 FFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLL 342
FF Q K G+ V+K+AV+G GLMG+GI I + V++K+ N L
Sbjct: 345 FFGQTTCKK----NRFGVPKNAVKKIAVVGAGLMGAGIVQVSIDKDFDVIMKDTNETALY 400
Query: 343 KGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKI 402
+G+ ++ + V + K + + + L LDYS FK+ D+VIEAV E + +K K+
Sbjct: 401 RGVNQVQKGMHAAVKKKKYSNFQKDRYFSKLDSTLDYSSFKNADIVIEAVFEDITIKHKV 460
Query: 403 FSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTS 462
E+E+ P +C+LATNTS I +N + ++ D+IIG H+FSP H M LLEI+ + TS
Sbjct: 461 IKEIEENTPNYCVLATNTSAISINEIAAGSNRPDKIIGMHYFSPVHKMQLLEIITHKGTS 520
Query: 463 AQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSF 522
+ I + VG K ++VG+ GF R A L+ GVD +D+ + F
Sbjct: 521 TETIKTAVDVGLKQGKTIIIVGDGPGFYTTRILSALLSEAIRLMQEGVDPIYLDNLTKKF 580
Query: 523 GLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLL---LKSGRNGKANGKGLY 579
G P+G L D G V A S K +R F +++L +K+G G+ +GKG+Y
Sbjct: 581 GFPVGAATLSDEVGIDVGAHISTYLVKELGER-FHGGDINILNDMVKAGFLGRKSGKGIY 639
Query: 580 TYEKGSKPKP-DPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 638
TYE K K + L I+++ + + P G ++ ++++ + F VNE+ LEE
Sbjct: 640 TYETNVKNKNVNLLALDILKKYK----LEPKGNT-TIEDRQLRMVSRF--VNEAILCLEE 692
Query: 639 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLE 698
I+ + D +V G+ FP + GG W D+ GA+ + ++++ YG+ FKP + L
Sbjct: 693 NILANPLEGDIGAVFGLGFPPFTGGPFRWVDSYGADNLVRKMEEFQNHYGDAFKPCQTLY 752
Query: 699 ERAT 702
+ A+
Sbjct: 753 DMAS 756
>gi|206576247|ref|YP_002237269.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae 342]
gi|254788651|sp|B5XVW2.1|FADJ_KLEP3 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|206565305|gb|ACI07081.1| fatty oxidation complex, alpha subunit FadJ [Klebsiella pneumoniae
342]
Length = 714
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 236/715 (33%), Positives = 369/715 (51%), Gaps = 38/715 (5%)
Query: 8 MEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGG 64
+EV D +A+IT+ P +N L ++ + V+ +V ++ F G
Sbjct: 9 LEVRADKIAVITIDAPGEKMNTLKAEFGNQVRGLIRQVRDDKSVRGVVFISAKTDNFIAG 68
Query: 65 FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
DIN+ + A + + +++ I P++AA+ G LGGGLELA+ CH RI
Sbjct: 69 ADINMIARCRSAQEAEALARQGQQIMAE-IHGLSIPVIAAIHGACLGGGLELALACHGRI 127
Query: 125 AA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDA 179
+ KT+LGLPE+ LG++PG TQRLPRL+G+S A++MML + + + + K GL+D
Sbjct: 128 CSDDEKTRLGLPEVQLGLLPGSGGTQRLPRLIGVSTALDMMLTGRQLRARQALKAGLVDE 187
Query: 180 VVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLK--LARLQAKKTAPN 237
VV LL+ A+++A + +P R + +++ + R +L + + +KT N
Sbjct: 188 VVPQAILLQA----AVELALKGRPASRDMPVRERVLAGPLGRHLLFHFVGKQTQRKTQGN 243
Query: 238 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 297
P + L V+E G+ HG SG +EA+ F EL M S+ L +FFA K D
Sbjct: 244 YPAVKRILQVVENGLAHGCSSGYAEEARAFGELAMTPQSQALRSIFFASTDLKK-----D 298
Query: 298 IGLK--PRGVRKVAVIGGGLMGSGIATAHILNN-IYVVLKEVNSEYLLKGIKTIEANVRG 354
G + P + +AV+GGGLMG GIA + V +K++ + +K +
Sbjct: 299 RGAEAEPGPLTSIAVLGGGLMGGGIAYVTACKGGLPVRIKDIQPRGINHALKYSWDLLNK 358
Query: 355 LVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHC 414
V + +L + + + M+ G DY F D+VIEAV E + LKQ++ SE+E+ C P
Sbjct: 359 QVRQRRLRPSERDRQMAMISGATDYQGFAHRDVVIEAVFEDLALKQRMVSEVEQYCGPQT 418
Query: 415 ILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGK 474
I A+NTS++ + + + R+IG HFFSP MPL+E++ + T Q I ++ + K
Sbjct: 419 IFASNTSSLPIGDIAAQARRPGRVIGLHFFSPVEKMPLVEVIPHKGTDPQAIATVVQLAK 478
Query: 475 IIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDL 534
K P+VV + GF VNR PY A L+ G V ID A+ FG P+GP QLLD
Sbjct: 479 RQGKTPIVVADKAGFYVNRILAPYINEAMRLLVEGEPVEEIDKALVKFGFPVGPIQLLDE 538
Query: 535 AGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTYE---KGSKPKP 589
G + AF +R F SP ++D +LK R G+ N +G Y YE + SK +P
Sbjct: 539 VGIDTGTKIIPVLESAFGER-FSSPANIIDAILKDDRKGRKNNRGFYLYETKGRKSKKRP 597
Query: 590 DPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
DP+V P++ R S + + +++ E + ++NE+ R +E I+ A D D
Sbjct: 598 DPAVYPLLGIDRPQSRL---------SAQQVAERCVMMMLNEAARCFDEQIIRSARDGDI 648
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D +GA V L++ + YG F P L A +G
Sbjct: 649 GAVFGIGFPPFLGGPFRYMDTIGAGEVAAILQRLAAQYGPRFTPCDTLLRMAEQG 703
>gi|171057533|ref|YP_001789882.1| 3-hydroxyacyl-CoA dehydrogenase [Leptothrix cholodnii SP-6]
gi|170774978|gb|ACB33117.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Leptothrix cholodnii
SP-6]
Length = 687
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 229/664 (34%), Positives = 352/664 (53%), Gaps = 31/664 (4%)
Query: 14 GVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKV 73
GV +ITL NPP+N+L + + + E A V+AIVLTG+ FS G D++ F
Sbjct: 10 GVTVITLDNPPLNSLGHVLRSRIVAAIEVAEVDPAVRAIVLTGSPRAFSAGADVSEF--- 66
Query: 74 HGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGL 133
G M + + V+ I C KP+VAA++G+ALGGGLELA+ CHAR+A + ++GL
Sbjct: 67 ---GTPRQMAEPILRSVLERIRICTKPVVAALDGVALGGGLELALACHARVALGQARVGL 123
Query: 134 PELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVS 190
PE+TLG+IPG TQRLPRL G+ A+ +M + + + L D VV + L++ +
Sbjct: 124 PEITLGLIPGSGGTQRLPRLAGIDLALTLMQGGAPMAAAQLASTSLFDRVV-DDGLIEAA 182
Query: 191 RLWALDIAARRKPWIRSLHRTDKLGSLSE---AREVLKLARLQAKKTAPNMPQHQACLDV 247
A +A PW + D+L +E + L RL A++ P + A LD
Sbjct: 183 ADVARQLADAGAPWPHA----DRLNLDAEYVATKVSLARQRLNARQRL--QPAYGALLDA 236
Query: 248 I--EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGV 305
I G + G + L+ A+ F L+ ++ L + F A+R + ++P+ + +PR V
Sbjct: 237 IGASAGPIDAGLA--LERAR-FLGLIGTTEAQALRYQFKAERDSHRLPDTLQV--EPRKV 291
Query: 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDK 365
VAVIG G MG+GIA + + V+L E + L +G + I + G V GKL
Sbjct: 292 ATVAVIGAGTMGAGIAICALDATLDVILLEQDETALARGRQRIADHYAGRVAAGKLGAAV 351
Query: 366 ANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL 425
A+ A L G D+ D+VIEAV E + +KQ +F L+ P +LATNTS +D+
Sbjct: 352 ADAAQARLTGTCDWQALARADVVIEAVFEELSVKQDVFRRLDAVARPGAVLATNTSYLDI 411
Query: 426 NIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 485
+ + TS ++G HFFSPA VM LLE++R TS + MT+G+ ++KVPV+ GN
Sbjct: 412 DAIAAVTSRPQDVLGLHFFSPAQVMKLLEVIRGAHTSPDAMATAMTLGRTLRKVPVLCGN 471
Query: 486 CTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSK 545
GF NR + Y + ++ G +D A+ FG +GPF + DL+G +A +
Sbjct: 472 AFGFIGNRIYNAYRRQCEFMLEDGAWPEEVDQALTDFGFAMGPFAVADLSGLDIAWRMRR 531
Query: 546 EFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVLPIIEECRRLS 604
R P+++ L + GR G+ +G G Y Y G + + D +V +I + +
Sbjct: 532 AQAATRDPRERHVPVLEQLCEQGRLGQKSGAGYYRYADGKRAQTTDDTVHDLIVQ----A 587
Query: 605 NIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGI 664
+ G + ++ +EI L +VNE+ + +G+ R SD+D V G FP ++GG
Sbjct: 588 SAARGIQRRTLAPQEIQRRALLAMVNEAACLYADGVATRPSDIDVVLVQGYGFPRWQGGP 647
Query: 665 VFWA 668
VFWA
Sbjct: 648 VFWA 651
>gi|294146602|ref|YP_003559268.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingobium japonicum UT26S]
gi|292677019|dbj|BAI98536.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingobium japonicum UT26S]
Length = 695
Score = 345 bits (886), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 239/695 (34%), Positives = 366/695 (52%), Gaps = 33/695 (4%)
Query: 17 IITLINPPVNALAIP--IVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
++ L N PVNAL+ V + +EA + IV+ G G F GG DI F
Sbjct: 13 VLRLSNGPVNALSAGNGFVDQIAAAVDEAAGDPACRVIVIAGAGRMFCGGADIGDFDGA- 71
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
VS + DV + +E C+KP++ A+ G+ALGGGLELAM H RIA ++LGLP
Sbjct: 72 -PTQVSRVRDV-----IAAVEACEKPVIMAIHGMALGGGLELAMAGHYRIAQAGSRLGLP 125
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 191
E+TLG++PG TQRLPRL+G A++MML K +T+E+ GL+D +V + +
Sbjct: 126 EVTLGLLPGAGGTQRLPRLIGAGAALDMMLSGKPVTAEQAASSGLVDRLVDDDVVEA--- 182
Query: 192 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQA-CLDVIEE 250
AL++A P L RT L + E + R + + P C+ + +
Sbjct: 183 --ALEVARGAPP----LRRTGALPVPVDLAEAVDARRAKLRAGLSQAPARIVDCVAALSD 236
Query: 251 GIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAV 310
+ +G+ EA++F EL+ + SRGL H FF +R +++P + R V
Sbjct: 237 DLA----AGLALEARLFGELMRSEASRGLRHAFFGERTVARIPGLAADVRPRDVRRVGVV 292
Query: 311 IGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNAL 370
GG LMG+GIA A + + V + E+ +E L K I ++ V +G++ QD A+ +
Sbjct: 293 GGG-LMGTGIALALLNAGVPVTMVELRAEALSKAEAAIRKTIQRDVEKGRIGQDAADARM 351
Query: 371 KMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGE 430
+ + D+VIEAV E + +K+++FS L+ P ILA+NTST+DL+ +
Sbjct: 352 AAFTSATELEALAEADLVIEAVFEDMGVKKQVFSALDAITRPDAILASNTSTLDLDAIAA 411
Query: 431 KTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFA 490
+ R++G HFFSPA++M LLE+VR T+ V+ M +GK I KV VV G C GF
Sbjct: 412 LVADPSRVVGLHFFSPANIMRLLEVVRGRDTAPDVLATAMALGKRIGKVGVVSGVCDGFI 471
Query: 491 VNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKA 550
NR F Y + L+ G +ID+A+ +G+ +GP + +DLAG+ + A K
Sbjct: 472 GNRMFEEYLRQVYFLLEEGALPQQIDAAMERWGMAMGPCRTMDLAGHDIGWAIRKRRAVE 531
Query: 551 FPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGG 610
PDR + S ++D + + GR G+ +GKG+Y Y G + DP + +IE+ + G
Sbjct: 532 QPDRPY-SGVIDRICELGRFGQKSGKGIYVYPDGRTAQTDPEITRLIED----YSAEIGL 586
Query: 611 KPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADA 670
+ ++ ++EIV L +VNE +LEEGI R D+D + G F RGG +F AD
Sbjct: 587 QRRAIGDEEIVGRCLLALVNEGAHILEEGIAYRPVDIDMIYLHGYGFGRERGGPMFQADL 646
Query: 671 VGANYVYTSLKKWSQ-LYGNFFKPSRFLEERATKG 704
+G V L+ + G + P+ +E A G
Sbjct: 647 MGLPAVLDRLRALAAGRNGWAWTPAPLIERLAATG 681
>gi|296224758|ref|XP_002758183.1| PREDICTED: peroxisomal bifunctional enzyme [Callithrix jacchus]
Length = 722
Score = 345 bits (886), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 238/723 (32%), Positives = 385/723 (53%), Gaps = 51/723 (7%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
++ +A+I NPPVN +++ ++ +++ ++A + +KAIV+ G G+FS G DI+ F
Sbjct: 7 HNALALIRFRNPPVNVISMALLREMEEGLQKAVTDHTIKAIVICGAEGKFSAGADIHGFS 66
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
G +S+ VV+ I+ KP+VAA++G+ALGGGLELA+GCH RIA + ++
Sbjct: 67 APRTFG-------LSLGSVVDEIQRNVKPVVAAIQGMALGGGLELALGCHYRIAHAEARV 119
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS---EE 185
GLPE+TLG++PG TQ LPRL+G+ A++++ + I + E KLG++D VV S EE
Sbjct: 120 GLPEVTLGLVPGARGTQLLPRLIGVPAALDLITTGRHILAGEALKLGILDKVVNSDLLEE 179
Query: 186 LLKVS-RLWALDIAARR---KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 241
++ + R+ + +RR KP I+SL D + A L+ +K P
Sbjct: 180 AIRFAQRVSDQPLESRRLFKKP-IQSLPNMD---------SIFGEALLKMRKQHPGCLAQ 229
Query: 242 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 301
+AC+ ++ + + G KE ++F+ L+ +R L + F A+R +K + + K
Sbjct: 230 EACVRAVQAAVQYPYEVGSKKEEELFQYLLQSGQARALQYAFLAERKANKWSSPSGASWK 289
Query: 302 ---PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTR 358
+ V V V+G G MG GI + I V+ + + L K I + + ++
Sbjct: 290 TASAQPVSSVGVVGLGTMGRGIVISFARARIPVIAVDSDKNQLATANKIITSVLEKEASK 349
Query: 359 GKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 418
+ + + L + E VD+VIEAV E + LK+++F+EL C P L T
Sbjct: 350 MQQSGHPWSGPKPRLTSSM--KELGGVDLVIEAVFEDMSLKKQVFAELSAVCKPEAFLCT 407
Query: 419 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKK 478
NTS++D++ + T+ +IG HFFSPAH+M LLE++ ++ +S I +M + K IKK
Sbjct: 408 NTSSLDVDEIASSTNRPHLVIGTHFFSPAHIMKLLEVIPSQYSSPTTIATVMNLSKKIKK 467
Query: 479 VPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYG 538
+ VVVGNC GF NR PY L+ G +D + FG +GPF++ DLAG
Sbjct: 468 IGVVVGNCFGFVGNRMLNPYYSQTYFLLEEGSKPEEVDRVLEEFGFKMGPFRVSDLAGLD 527
Query: 539 VAAATSK-------EFDKAFPDRSFQS----PLVDLLLKSGRNGKANGKGLYTYEK--GS 585
V + K P R S P+ D+L + GR G+ GKG Y Y+K G
Sbjct: 528 VGWKSRKGQGLTGPTLPPGTPARKRGSRRYCPIPDVLCELGRFGQKTGKGWYQYDKPLGR 587
Query: 586 KPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRAS 645
KPDP + + + R +I +P ++ EI+E L+ ++NE+ R+L EGI
Sbjct: 588 IHKPDPWLSKFLSQYRETHHI----EPRIISRDEILERCLYSLINEAFRILGEGIAASPE 643
Query: 646 DLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF--FKPSRFLEERATK 703
+D + G +P +RGG +F+A VG V L+K+ + + +PS +L++ A++
Sbjct: 644 HIDVVYLHGYGWPRHRGGPMFYASTVGLPAVLEKLQKYYRQNPDIPQLEPSDYLKKLASQ 703
Query: 704 GIP 706
G P
Sbjct: 704 GNP 706
>gi|383189174|ref|YP_005199302.1| fatty oxidation complex, alpha subunit FadJ [Rahnella aquatilis CIP
78.65 = ATCC 33071]
gi|371587432|gb|AEX51162.1| fatty oxidation complex, alpha subunit FadJ [Rahnella aquatilis CIP
78.65 = ATCC 33071]
Length = 734
Score = 345 bits (886), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 249/703 (35%), Positives = 370/703 (52%), Gaps = 28/703 (3%)
Query: 15 VAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSGGFDINVFQ 71
V IIT+ P VN L + ++A +K +VL +G F G DI++
Sbjct: 31 VGIITIDVPGEKVNTLKAEFAQQICTILQKAQQYPGLKGLVLISGKTDSFIAGADISMIS 90
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA--PKT 129
A + + + + V+ I P+VAA+ G LGGGLELA+ CHAR+ + KT
Sbjct: 91 GCQTAAEATQLAQKG-QTVMAQIASFSVPVVAAIHGACLGGGLELALACHARVCSLDEKT 149
Query: 130 QLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL 186
QLGLPE+ LG++PG TQRLPRL+G KA+E+ML +SI +++ ++GL+D V L
Sbjct: 150 QLGLPEVQLGLLPGSGGTQRLPRLIGAPKALELMLTGRSIRAKQALRMGLVDDAVPYSVL 209
Query: 187 LKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVL-KLARLQAK-KTAPNMPQHQAC 244
L+ AL+ A+ + L +L + VL R QA+ KT N P +
Sbjct: 210 LQT----ALERVAKGRKSRPPLPWQARLAGGPLGKSVLFHFVRKQARAKTHGNYPATEKI 265
Query: 245 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRG 304
+DV+ G+ G +G EA F ELVM S L +FFA A K +P
Sbjct: 266 IDVVRTGLDQGSGNGYQAEANAFGELVMTPESAALRSLFFASTALKKEKGGD---AEPLP 322
Query: 305 VRKVAVIGGGLMGSGIA-TAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQ 363
VR+V ++GGGLMG GIA I + V +K++N E + +K + V +LT+
Sbjct: 323 VRRVGILGGGLMGGGIAHVTAIKAGLPVRIKDINHEGIRHALKYSWDLLEKKVRSRRLTR 382
Query: 364 DKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI 423
+ + ++ G DYS F D+V+EAV E + LKQ + +E+E+ H I A+NTS++
Sbjct: 383 TEQQRQMMLISGTTDYSGFAQTDIVVEAVFEDLSLKQSMVAEIEQNAALHTIFASNTSSL 442
Query: 424 DLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVV 483
++ + E+ S +++IG H+FSP MPL+E++ TSAQ I +++ K K +VV
Sbjct: 443 PIHKIAEQASRPEQVIGLHYFSPVDKMPLVEVIPHAGTSAQTISTTVSLAKKQGKTAIVV 502
Query: 484 GNCTGFAVNRAFFPY-SQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAA 542
G+ GF VNR PY +++AR L++ G V ID A+ +FG P+GP QLLD G V
Sbjct: 503 GDRAGFYVNRILAPYINEAARCLIN-GEPVDHIDKALVNFGFPVGPIQLLDEVGIDVGTK 561
Query: 543 TSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTY-EKGSKPKPDPSVLPIIEECR 601
AF +R D +LK R G+ NGKG Y Y +KG V P I
Sbjct: 562 IGPILVDAFGERFAAPSGFDAVLKDDRKGRKNGKGFYFYGQKGRAAAKKKQVDPAI---Y 618
Query: 602 RLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYR 661
RL N+ P + +E EI + + ++NE+ R L+E ++ A D D +V G+ FP +R
Sbjct: 619 RLLNVTPKAQQ---SEDEIAQRCVMLMLNEAVRCLDENVIRSARDGDLGAVFGIGFPPFR 675
Query: 662 GGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
GG + D +G V +L++ +Q YG F P L RA +G
Sbjct: 676 GGPFRYMDQLGLASVVKTLERLAQQYGERFTPCAGLLRRAQQG 718
>gi|410086602|ref|ZP_11283310.1| Enoyl-CoA hydratase [Morganella morganii SC01]
gi|409766822|gb|EKN50910.1| Enoyl-CoA hydratase [Morganella morganii SC01]
Length = 717
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 231/718 (32%), Positives = 366/718 (50%), Gaps = 35/718 (4%)
Query: 2 AAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKA-IVLTGNGGR 60
+A R+T+ + GV I + VN L A + +A ++A ++++G
Sbjct: 10 SAFRLTVRPDHTGVITIDVPGEKVNTLKAEFAAQFEAVLRDARQIPGLRAMVIISGKPDT 69
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
F G DI++ A + + S + + NLIE+ P+VAA+ G LGGGLELAM C
Sbjct: 70 FIAGADIHMIAGCTEAAQAQALSE-SGQRLFNLIENYPLPVVAAIHGSCLGGGLELAMAC 128
Query: 121 HARIA--APKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLG 175
H+R+ + KT+LGLPE+ LG++PG TQRLP L+GL A++MML + + +++ K+
Sbjct: 129 HSRVVTDSDKTRLGLPEVQLGLLPGSGGTQRLPALIGLVAALDMMLTGRQLRAKQAVKMR 188
Query: 176 LIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKK-T 234
L D +V + LL+ + AL ++ + R +K+ L + + ++ R Q ++ +
Sbjct: 189 LADDIVPPDILLETAVARALSANPAQRDPVPFRQRLEKMKGLRDI--IFRITRSQVRRRS 246
Query: 235 APNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPN 294
+ P + +DV++ G+ G +G EA F +L + S L H+FFA A K
Sbjct: 247 GGHYPAAEQIIDVVQCGLEKGREAGFKAEAAAFGKLAVTPVSGALRHLFFASTALKKE-- 304
Query: 295 VTDIGLKPRGVRKVAVIGGGLMGSGIAT-AHILNNIYVVLKEVNSEYLLKGIKTIEANVR 353
+ G+KP + VAV+GGGLMG+GIAT + V +K+V+ E K + ++
Sbjct: 305 -SADGVKPAELHHVAVLGGGLMGAGIATITRQRAGLPVRIKDVSQEGANKALAFFWQHLS 363
Query: 354 GLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPH 413
V R +L+ + + + G DY F +D V EAV ES+ LKQ++ +E+E P
Sbjct: 364 KQVKRRRLSPRERTQLMSGMTGTTDYRGFHRIDFVAEAVFESLALKQQMIAEIEAVTSPD 423
Query: 414 CILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVG 473
I A+NTS++ + + K S +++IG H+FSPA MPL EI+ E T A + + +
Sbjct: 424 TIFASNTSSLPIRDIAAKASRPEKVIGLHYFSPAEKMPLAEIIPHEGTDAVTLATTLQLA 483
Query: 474 KIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLD 533
+ K +VVG+ GF VNR PY A ++ G +ID A+ FG PIGP LLD
Sbjct: 484 RRQGKTAIVVGDKAGFYVNRILAPYITEALRCLTEGEPPEKIDKALTDFGFPIGPVALLD 543
Query: 534 LAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSV 593
G V + AF +R P +D L + R G+ N +G Y Y S
Sbjct: 544 EVGIDVGTKIMPVLEAAFGERFALPPQLDALFRDNRLGRKNKRGFYDY----------SP 593
Query: 594 LPIIEECRRLSNIMPGGKPI----------SVTEKEIVEMILFPVVNESCRVLEEGIVVR 643
LP + C R + K I +T +EI E L ++NE+ R L+E ++
Sbjct: 594 LPWWKRCGRKAP-RKADKAIYPLLGITVQERLTSQEITERCLMMMLNEAVRTLDEQVIRS 652
Query: 644 ASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERA 701
+D D +V G+ F + GG ++ D+V A + L + YG+ F P L++RA
Sbjct: 653 PADGDVGAVFGIGFSPFLGGPFYYMDSVSAVVMTEKLTALAARYGDRFTPCEALQQRA 710
>gi|260776409|ref|ZP_05885304.1| enoyl-CoA hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase/3-hydroxyacyl-CoA
dehydrogenase/3-hydroxybutyryl-CoA epimerase [Vibrio
coralliilyticus ATCC BAA-450]
gi|260607632|gb|EEX33897.1| enoyl-CoA hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase/3-hydroxyacyl-CoA
dehydrogenase/3-hydroxybutyryl-CoA epimerase [Vibrio
coralliilyticus ATCC BAA-450]
Length = 707
Score = 345 bits (885), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 220/688 (31%), Positives = 367/688 (53%), Gaps = 27/688 (3%)
Query: 25 VNALAIPIVAGLKDKFEE-ATSRDDVKAIVLTG-NGGRFSGGFDINVFQKVHGAGDVSLM 82
+N L ++D F + + VK +++ F G D+ + + A + +
Sbjct: 28 MNTLQAAFAQEMEDIFTQLKEKKSSVKGLIVHSLKPDNFIAGADVRMLDACNSASEAQAL 87
Query: 83 PDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA--APKTQLGLPELTLGV 140
+ ++ L D P++AA+ G LGGGLELA+ C R+ + KT+LGLPE+ LG+
Sbjct: 88 AEQGQQMFQQL-SDLPYPVIAAIHGPCLGGGLELALACDYRVCTNSDKTRLGLPEVQLGL 146
Query: 141 IPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDI 197
+PG TQRLPRL+GL +++M+L K + +++ KLG++DAVV LL+V++ +
Sbjct: 147 LPGSGGTQRLPRLIGLLPSLDMILTGKQLRAKKAKKLGVVDAVVPETILLEVAKSFVEKH 206
Query: 198 AARRKPWIRSLHRTDKLGSLSEAREVL--KLARLQAKKTAPNMPQHQACLDVIEEGIVHG 255
A + + + + + + R+V+ + ++ +KT N P +A L+VI G+ G
Sbjct: 207 AGKSRAKRKVSTKEKLIANTGLGRKVIFEQASKKTIEKTRGNYPAAEAILEVIRHGLEKG 266
Query: 256 GYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGL 315
G KEA+ F ELVM S+ L +FFA K N +D +P+ + + AV+GGGL
Sbjct: 267 FEKGQQKEAQRFGELVMTSESKALRSIFFATTEMKK-ENGSDA--EPKAIERAAVLGGGL 323
Query: 316 MGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLK 374
MG+GI+ + + V +K+V+++ +L +K R +++ + + + +
Sbjct: 324 MGAGISHVSVSKAKVPVRIKDVSNDGVLNALKYNYKLFDKQRKRRIISKAQLQSKMLQMS 383
Query: 375 GVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSS 434
G D++ F D+V+EAV E + LKQ++ +++EK I ATNTS++ ++ + +K
Sbjct: 384 GGTDFTSFNHADVVVEAVFEDLNLKQQMVADVEKNAKDTTIFATNTSSLPIHQIADKAQR 443
Query: 435 QDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRA 494
+ I+G H+FSP MPL+E++ E TS + I ++ + K P+VV +C GF VNR
Sbjct: 444 PENIVGLHYFSPVEKMPLVEVIPHETTSDETISTVVEFARKQGKTPIVVKDCAGFYVNRI 503
Query: 495 FFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR 554
PY A ++ G + ++D A+ +FG P+GP LLD G + A + +R
Sbjct: 504 LAPYMNEAAQVLMSGEPIEQLDKALLNFGFPVGPITLLDEVGVDIGAKIMPILVEELGER 563
Query: 555 SFQSPLV-DLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPI 613
FQ P V D+LL R G+ GKG YTY KG K + D SV +L ++ P K
Sbjct: 564 -FQGPDVFDILLNDNRKGRKTGKGFYTY-KGKKKEVDKSVY-------KLLSLSPESK-- 612
Query: 614 SVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGA 673
+ EK+I + P++NE+ R L+EGI+ D D ++ G+ FP + GG + D +G
Sbjct: 613 -MAEKDIAMRCVLPMLNEAVRCLDEGIIRSPRDGDIGAIFGIGFPPFLGGPFRYMDQIGV 671
Query: 674 NYVYTSLKKWSQLYGNFFKPSRFLEERA 701
+ + + +Q YG+ F P L RA
Sbjct: 672 KKLVEMMNENAQKYGDRFAPCDGLLTRA 699
>gi|440286759|ref|YP_007339524.1| 3-hydroxyacyl-CoA dehydrogenase; short chain enoyl-CoA hydratase
[Enterobacteriaceae bacterium strain FGI 57]
gi|440046281|gb|AGB77339.1| 3-hydroxyacyl-CoA dehydrogenase; short chain enoyl-CoA hydratase
[Enterobacteriaceae bacterium strain FGI 57]
Length = 716
Score = 345 bits (884), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 231/722 (31%), Positives = 369/722 (51%), Gaps = 32/722 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
++ V D VAIIT+ P +N L ++ ++ ++ +V+ + F
Sbjct: 8 SLTVRPDNVAIITIDVPDEKMNTLKAEFGTQVRAILKQIRDNKALQGVVIISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +++ L P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGHCASAQEAEGLARQGQQIMAEL-NGLSIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ + PKT LGLPE+ LG++PG TQRLPRL+G+S A++M+L K + + + K+GL+D
Sbjct: 127 VCSDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALDMILTGKQLRARQALKVGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVL-KLA-RLQAKKTAP 236
VV LL+ A+++A + R L +++ + R +L LA + +KT
Sbjct: 187 DVVPQTILLEA----AVELAKQAPSRSRHLPVKERILAGPLGRNILFTLAGKKTEQKTHG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+VIE G+ G SG EA+ F ELVM S+ L H+FFA K P +
Sbjct: 243 NYPATKKILEVIETGLAQGTSSGYDAEARAFGELVMTSQSKALRHIFFASTEIKKDPGAS 302
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
R V + G + + + V +K++N++ + +K + V
Sbjct: 303 VEAGPLRAVGILGGGLMGGGIAFVTATK--GKLPVRIKDINAKGINHALKYSWELLDNKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R + ++ ++ L ++ G DY F D+VIEAV E + LKQK+ SE+E+ C PH I
Sbjct: 361 RRRHIKANERDSQLALISGSTDYRGFAHRDLVIEAVFEDLALKQKMVSEVEQQCAPHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+E++ TS Q I + + K
Sbjct: 421 ASNTSSLPIGDIAAQAQRPEQVIGLHFFSPVEKMPLVEVIPHAATSEQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K+P+VV + GF VNR PY A +++ G + ID+A+ FG P+GP QLLD G
Sbjct: 481 GKMPIVVADRAGFYVNRILAPYINEAMRMLTDGERIEDIDNALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKG--SKPKPDP 591
+ A+ DR F +P L+ +L R G+ NG+G Y Y KG SK +PD
Sbjct: 541 IDTGTKIMPVLEAAYGDR-FSAPATLISAILNDDRKGRKNGRGFYLYGAKGRTSKKQPDS 599
Query: 592 SVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDAS 651
++ + R S + P ++I E + ++NE+ R +E ++ A D D +
Sbjct: 600 AIYSLPGMASRNSQLSP---------QQIAERCVLLMLNEAARCFDERVIRSARDGDIGA 650
Query: 652 VLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSAPV 711
V G+ FP + GG + D++GA V L++ + YG F P L A +G +PV
Sbjct: 651 VFGIGFPPFLGGPFRYMDSLGAGEVVARLQRLTTQYGPRFTPCEALVAMAERGETFWSPV 710
Query: 712 SS 713
+
Sbjct: 711 ET 712
>gi|412337904|ref|YP_006966659.1| enoyl-CoA isomerase [Bordetella bronchiseptica 253]
gi|408767738|emb|CCJ52494.1| Putative enoyl-CoA isomerase [Bordetella bronchiseptica 253]
Length = 694
Score = 345 bits (884), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 230/697 (32%), Positives = 354/697 (50%), Gaps = 31/697 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSGGFDINVFQKV 73
+ ++TL +PPVNAL + GL E+A +R DV+A++L + G FS G DI F +
Sbjct: 11 IGVVTLDSPPVNALGRTLRHGLAQCLEQAYARPDVRALLLVSARPGIFSAGADIKEFDQA 70
Query: 74 HGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGL 133
D L EL+ + IE+ P+VA ++G ALGG LELA+GCH R+A+P+ LGL
Sbjct: 71 GSDQDAGL-----AELI-DRIENAPVPVVALLDGAALGGALELALGCHYRLASPRASLGL 124
Query: 134 PELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVS 190
PE+ LG++PG TQRLPRLVG A+EM+L + + E + L DA++++++ L+ +
Sbjct: 125 PEIKLGLLPGAGGTQRLPRLVGARHAVEMVLGGEPVGGETALRYKLADALLSADDTLEQA 184
Query: 191 RLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 250
W R P + R L +L+ A +A P +
Sbjct: 185 LAWM-----RNAPGGLARRRVASLPALAPASIAEAA---RAAAIRPVGSAAAREAALACL 236
Query: 251 GIVHGGY-SGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 309
G + +G E + F L +R L + FFA+R +V+ R + +VA
Sbjct: 237 AAAQGPFDAGRALERESFARLRDGAEARALRYAFFAERPRPPAGDVS-----ARRIEQVA 291
Query: 310 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 369
V+G G MG+GI + V+ +V+++ L +G + + L R +LT +A
Sbjct: 292 VVGAGTMGTGIVICLADAGLPVIWHDVDADRLAQGRAQVCQHFERLAARKRLTSRQAEQR 351
Query: 370 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 429
+ + + + D+ IEAV E + +K +F EL++ P IL TNTST+D++ +
Sbjct: 352 VAAVATTGEMAGIAQADLAIEAVFEDMAVKCAVFRELDRVLKPGAILGTNTSTLDVDRIA 411
Query: 430 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 489
T ++G HFFSPA VMPLLEIVR T A V+ + + ++K VV G C GF
Sbjct: 412 HSTRRPQDVVGLHFFSPAPVMPLLEIVRGAATHADVVAAAQGLARRLRKTAVVAGVCDGF 471
Query: 490 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDK 549
NR + Y + A L+V G +D+A+R +G +GPFQ+ DLAG V +
Sbjct: 472 IGNRMWHQYLRQAALMVHEGAMPMEVDAALRDWGFAMGPFQVADLAGLDVGDSIRLRQRS 531
Query: 550 AFPDRSFQSPLVDLLLKSGRNGKANGKGLYTY-EKGSKPKPDPSVLPIIEECRRLSNIMP 608
P R + L D + +GR G G G++ Y + G +P+ D V +I R + +
Sbjct: 532 EMPHRPWPDWL-DRVSAAGRLGLKGGSGIHAYPDGGRQPRRDAEVEAMIAAASREAGV-- 588
Query: 609 GGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWA 668
++ EIVE L +V E+ R+LEEGI A+D+D + G FP +RGG A
Sbjct: 589 --SRRAIAADEIVERCLHALVVEAARLLEEGIAASATDVDAVFLAGYGFPRWRGGPCHSA 646
Query: 669 DAVGANYVYTSLKKWSQLYG-NFFKPSRFLEERATKG 704
DA+G V L++ + F++P L A +G
Sbjct: 647 DAMGLPAVVAGLRRRAATAEPEFWQPPGLLARLAAQG 683
>gi|226958400|ref|NP_001069248.2| peroxisomal bifunctional enzyme [Bos taurus]
gi|296491297|tpg|DAA33360.1| TPA: peroxisomal bifunctional enzyme [Bos taurus]
Length = 723
Score = 345 bits (884), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 245/722 (33%), Positives = 378/722 (52%), Gaps = 46/722 (6%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+ +A+I L NPPVNA++ + G+K+ ++A + D VKAIV+ G G F G DI F
Sbjct: 8 QNCLALIRLRNPPVNAISTTVARGIKESLQKAITDDTVKAIVICGADGIFCAGADIREF- 66
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
KVH D+ L +V+ I+ KKP+VAA++ LALGGGLELA+GCH RIA + Q+
Sbjct: 67 KVHKTFDIQLGD------IVDEIQRNKKPVVAAIQKLALGGGLELALGCHYRIAHAEAQV 120
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS---EE 185
G PE+TLG++PG TQ LPRLVG+ A+++++ + I++ E KLG+ID +V S EE
Sbjct: 121 GFPEVTLGILPGARGTQLLPRLVGVPAALDLIISGRHISANEALKLGIIDKIVNSDPIEE 180
Query: 186 LLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACL 245
+K ++ + + P R + + SL + A LQ +K P +AC+
Sbjct: 181 SIKFAQR-----ISDQSPESRRICNM-PVPSLPNMDAIFSEALLQVRKRYPGWLSPEACV 234
Query: 246 DVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP--- 302
++ + + G KE ++ L ++ L +VFFA+R +K + K
Sbjct: 235 QAVQAAVQYPYDMGSKKEKELGLYLNTSGQAKALQYVFFAERMANKWSTPSGASWKTALG 294
Query: 303 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 362
R + V V+G G MG GI + I V+ E + + L K I + + + K+
Sbjct: 295 RPISSVGVLGLGTMGRGIVISFAKAQIPVIAVESDKKQLETASKIITSILEKEAS--KMQ 352
Query: 363 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 422
Q + + E VD+VIEAV E + LK+ +F+EL C P +L TNTS
Sbjct: 353 QSGHPWSGPKPRLTTSMKELSGVDLVIEAVYEDMNLKKHVFAELSAVCKPEALLCTNTSA 412
Query: 423 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 482
+D++ + + +IG HFFSPAHVM LLE++ + +S I +M + K IKK+ VV
Sbjct: 413 LDIDEIASSSDRPHLVIGTHFFSPAHVMKLLEVIPSRFSSPTTIATVMNLSKKIKKIGVV 472
Query: 483 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAA 542
VGNC GF NR Y L+ G ID + FG +GPF++ DLAG +
Sbjct: 473 VGNCFGFVGNRMLRSYYDQTYFLLEEGSKPEEIDEVLEEFGFKMGPFRVSDLAGLDIGWK 532
Query: 543 TSKEFDKAFPD------------RSFQSPLVDLLLKSGRNGKANGKGLYTYEK--GSKPK 588
+ K P R + P+ D+L +SGR G+ GKG Y Y+K G K
Sbjct: 533 SRKGQGLTGPTLPPGSSARKRGGRRY-CPIPDMLCESGRFGQKTGKGWYLYDKPLGRIHK 591
Query: 589 PDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLD 648
PDP + + + R +I KP ++ EI+E L+ ++NE+ R+L EG+ +D
Sbjct: 592 PDPWLSQFLAQYRETYHI----KPRIISRDEILERCLYSLINEAFRILGEGMAAIPEHID 647
Query: 649 DASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF--FKPSRFLEERATKG-I 705
+ G +P +RGG +F+A VG V L+K+ + + +P +L++ A++G +
Sbjct: 648 VIYLHGFGWPRHRGGPMFYASTVGLPTVLEKLQKYHRQNPDIPQLEPCDYLKKLASQGNL 707
Query: 706 PL 707
PL
Sbjct: 708 PL 709
>gi|432793556|ref|ZP_20027640.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE78]
gi|432799514|ref|ZP_20033536.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE79]
gi|431339219|gb|ELG26281.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE78]
gi|431343380|gb|ELG30344.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE79]
Length = 714
Score = 344 bits (883), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 232/715 (32%), Positives = 366/715 (51%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIANCKTAQEAEALARQGQQLMAE-IHALPVPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 MCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGSSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDRQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + D++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPDQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R L+E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCLDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E + +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMSKRG 702
>gi|432373014|ref|ZP_19616053.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE11]
gi|430895436|gb|ELC17699.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE11]
Length = 714
Score = 344 bits (883), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 231/715 (32%), Positives = 369/715 (51%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAVITIDVPGERMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPVPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
I PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 ICTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + + R+L +++ G L A + +KT
Sbjct: 187 DVVPHSILLEA----AVELAKQERTVSRTLPIRERVMAGPLGRALLFKMAGKKTEQKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+VIE G+ G SG EA+ F EL M S+ L ++FFA K P +
Sbjct: 243 NYPATERILEVIETGLAQGSSSGYDAEARAFGELAMTSQSQALRNIFFASTDVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D+ P + G G TA + V +K++N++ + +K + G V
Sbjct: 302 DVAPAPLNSVGILGGGLMGGGIAYVTAG-KAGLPVRIKDINAQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R + + + L ++ G +DY F D++IEAV E++ LKQ++ +E+E+ C PH I
Sbjct: 361 RRRHIKASERDKQLALISGSMDYHGFSHRDLIIEAVFENLELKQQMVAEVEQNCAPHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ ++ + S ++IG HFFSP MPL+EI+ TSAQ + + + K
Sbjct: 421 ASNTSSLPISDIAAHASRPGQVIGLHFFSPVEKMPLVEIIPHAGTSAQTLATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVQDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ + +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEATYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYRQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R L+E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCLDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E + G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLAAQYGSRFTPCERLLEMSEHG 702
>gi|424078379|ref|ZP_17815381.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
FDA505]
gi|424110797|ref|ZP_17845053.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
93-001]
gi|424450586|ref|ZP_17902307.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA32]
gi|425418333|ref|ZP_18799615.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
FRIK523]
gi|429079301|ref|ZP_19142447.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
99.0713]
gi|390643971|gb|EIN23277.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
FDA505]
gi|390660468|gb|EIN38171.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
93-001]
gi|390742848|gb|EIO13838.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA32]
gi|408336302|gb|EKJ51089.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
FRIK523]
gi|427329287|gb|EKW90618.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
99.0713]
Length = 712
Score = 344 bits (883), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 232/715 (32%), Positives = 365/715 (51%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 6 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 65
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 66 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 124
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 125 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 184
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A+ + + KT
Sbjct: 185 DVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRAQLFKMVGKKTEHKTQG 240
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 241 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 299
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA I V +K++N + + +K + G V
Sbjct: 300 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDINPQGINHALKYSWDQLEGKV 358
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 359 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 418
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 419 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 478
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 479 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVAHIDAALVKFGFPVGPIQLLDEVG 538
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 539 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 597
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R ++E ++ D D
Sbjct: 598 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCVDEQVIRSVRDGDI 645
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 646 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 700
>gi|15802887|ref|NP_288914.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O157:H7 str. EDL933]
gi|15832478|ref|NP_311251.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O157:H7 str. Sakai]
gi|168761215|ref|ZP_02786222.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
O157:H7 str. EC4501]
gi|217327205|ref|ZP_03443288.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
O157:H7 str. TW14588]
gi|387883556|ref|YP_006313858.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli Xuzhou21]
gi|419046263|ref|ZP_13593200.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC3A]
gi|419052061|ref|ZP_13598933.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC3B]
gi|419058092|ref|ZP_13604897.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC3C]
gi|419063565|ref|ZP_13610293.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC3D]
gi|419110368|ref|ZP_13655426.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC4F]
gi|420293300|ref|ZP_14795423.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TW11039]
gi|421819151|ref|ZP_16254649.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
10.0821]
gi|421831882|ref|ZP_16267169.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA7]
gi|423725942|ref|ZP_17700048.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA31]
gi|424122899|ref|ZP_17856245.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA5]
gi|424141894|ref|ZP_17873805.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA14]
gi|424148394|ref|ZP_17879778.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA15]
gi|424456780|ref|ZP_17907939.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA33]
gi|424476069|ref|ZP_17925411.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA42]
gi|424527109|ref|ZP_17970834.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC4421]
gi|424533262|ref|ZP_17976621.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC4422]
gi|425099007|ref|ZP_18501748.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
3.4870]
gi|425110981|ref|ZP_18512916.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
6.0172]
gi|425126925|ref|ZP_18528120.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
8.0586]
gi|425163374|ref|ZP_18562269.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
FDA506]
gi|425169110|ref|ZP_18567594.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
FDA507]
gi|425175176|ref|ZP_18573305.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
FDA504]
gi|425187471|ref|ZP_18584754.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
FRIK1997]
gi|425212862|ref|ZP_18608272.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA4]
gi|425218982|ref|ZP_18613959.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA23]
gi|425225534|ref|ZP_18620011.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA49]
gi|425231799|ref|ZP_18625848.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA45]
gi|425237715|ref|ZP_18631444.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TT12B]
gi|425411929|ref|ZP_18793720.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
NE098]
gi|425429592|ref|ZP_18810217.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
0.1304]
gi|428954061|ref|ZP_19025876.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
88.1042]
gi|428959997|ref|ZP_19031331.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
89.0511]
gi|428978845|ref|ZP_19048687.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
90.2281]
gi|428984647|ref|ZP_19054058.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
93.0055]
gi|428990818|ref|ZP_19059824.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
93.0056]
gi|428996622|ref|ZP_19065250.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
94.0618]
gi|429009002|ref|ZP_19076544.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
95.1288]
gi|429015507|ref|ZP_19082415.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
95.0943]
gi|429021455|ref|ZP_19087992.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
96.0428]
gi|429027410|ref|ZP_19093442.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
96.0427]
gi|429045597|ref|ZP_19110327.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
96.0107]
gi|429051018|ref|ZP_19115595.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
97.0003]
gi|429061895|ref|ZP_19125930.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
97.0007]
gi|429827303|ref|ZP_19358378.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
96.0109]
gi|429833630|ref|ZP_19364022.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
97.0010]
gi|444959192|ref|ZP_21277057.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
99.1753]
gi|444964408|ref|ZP_21282028.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
99.1775]
gi|444986403|ref|ZP_21303195.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA11]
gi|445029759|ref|ZP_21345446.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
99.1781]
gi|445051672|ref|ZP_21366726.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
95.0083]
gi|445057373|ref|ZP_21372243.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
99.0670]
gi|81765895|sp|Q8XCP2.1|FADJ_ECO57 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|12516705|gb|AAG57469.1|AE005465_9 putative enzyme [Escherichia coli O157:H7 str. EDL933]
gi|13362694|dbj|BAB36647.1| putative enzyme [Escherichia coli O157:H7 str. Sakai]
gi|189368241|gb|EDU86657.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
O157:H7 str. EC4501]
gi|209764650|gb|ACI80637.1| putative enzyme [Escherichia coli]
gi|217319572|gb|EEC27997.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
O157:H7 str. TW14588]
gi|377893093|gb|EHU57532.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC3A]
gi|377893746|gb|EHU58180.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC3B]
gi|377904679|gb|EHU68957.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC3C]
gi|377910040|gb|EHU74238.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC3D]
gi|377957250|gb|EHV20786.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC4F]
gi|386797014|gb|AFJ30048.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli Xuzhou21]
gi|390680876|gb|EIN56691.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA5]
gi|390700514|gb|EIN74815.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA15]
gi|390701304|gb|EIN75531.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA14]
gi|390742582|gb|EIO13581.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA31]
gi|390745511|gb|EIO16306.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA33]
gi|390769402|gb|EIO38337.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA42]
gi|390797386|gb|EIO64642.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TW11039]
gi|390850491|gb|EIP13866.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC4421]
gi|390861187|gb|EIP23463.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC4422]
gi|408064254|gb|EKG98736.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA7]
gi|408078962|gb|EKH13090.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
FDA506]
gi|408082791|gb|EKH16751.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
FDA507]
gi|408091185|gb|EKH24419.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
FDA504]
gi|408104353|gb|EKH36675.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
FRIK1997]
gi|408127401|gb|EKH57891.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA4]
gi|408137795|gb|EKH67490.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA23]
gi|408139875|gb|EKH69467.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA49]
gi|408146200|gb|EKH75343.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA45]
gi|408155264|gb|EKH83590.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TT12B]
gi|408326798|gb|EKJ42567.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
NE098]
gi|408346333|gb|EKJ60629.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
0.1304]
gi|408549874|gb|EKK27226.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
3.4870]
gi|408551231|gb|EKK28518.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
6.0172]
gi|408569904|gb|EKK45889.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
8.0586]
gi|408612908|gb|EKK86242.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
10.0821]
gi|427205210|gb|EKV75470.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
88.1042]
gi|427207586|gb|EKV77755.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
89.0511]
gi|427224319|gb|EKV93029.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
90.2281]
gi|427242113|gb|EKW09531.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
93.0056]
gi|427242613|gb|EKW10016.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
93.0055]
gi|427246204|gb|EKW13424.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
94.0618]
gi|427261315|gb|EKW27252.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
95.0943]
gi|427264802|gb|EKW30441.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
95.1288]
gi|427276418|gb|EKW40991.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
96.0428]
gi|427279374|gb|EKW43791.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
96.0427]
gi|427299292|gb|EKW62267.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
96.0107]
gi|427300622|gb|EKW63553.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
97.0003]
gi|427315581|gb|EKW77572.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
97.0007]
gi|429253891|gb|EKY38343.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
96.0109]
gi|429255673|gb|EKY39977.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
97.0010]
gi|444573142|gb|ELV49533.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
99.1753]
gi|444577243|gb|ELV53387.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
99.1775]
gi|444593577|gb|ELV68786.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA11]
gi|444641747|gb|ELW14970.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
99.1781]
gi|444664142|gb|ELW36332.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
95.0083]
gi|444670122|gb|ELW42056.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
99.0670]
Length = 714
Score = 344 bits (883), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 232/715 (32%), Positives = 365/715 (51%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A+ + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRAQLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA I V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVAHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R ++E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCVDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>gi|444350282|ref|YP_007386426.1| Enoyl-CoA hydratase (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase
(EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC
5.1.2.3) [Enterobacter aerogenes EA1509E]
gi|443901112|emb|CCG28886.1| Enoyl-CoA hydratase (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase
(EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC
5.1.2.3) [Enterobacter aerogenes EA1509E]
Length = 714
Score = 344 bits (883), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 233/716 (32%), Positives = 375/716 (52%), Gaps = 38/716 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVK-AIVLTGNGGRFSG 63
T+E+ D +A+IT+ P +N L ++ + ++ A+ ++ F
Sbjct: 8 TLEIRPDNIAVITIDAPGEKINTLKAEFGGEVRTIIRQLRENKALRGAVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ + A + + + +++ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIARCTSAAEAEALARQG-QQIMSEIHALSIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAAP--KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ + KT+LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + + K GL+D
Sbjct: 127 VCSDDDKTRLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRPRQALKAGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVL--KLARLQAKKTAP 236
VV LL+ A+++A + +P R++ +++ + R++L +A+ +KT
Sbjct: 187 DVVPQSILLRT----AVELALQGRPASRTVPVRERVLAGPLGRQLLFRMVAKKTQQKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L VIE G+ HG SG +EA+ F EL M S+ L +FFA K
Sbjct: 243 NYPAAERILQVIENGLAHGCSSGYAEEARAFGELAMTPQSQALRSIFFASTDLKK----- 297
Query: 297 DIGLK--PRGVRKVAVIGGGLMGSGIATAHILNN-IYVVLKEVNSEYLLKGIKTIEANVR 353
D G + P + +AV+GGGLMG GIA + V +K++ ++ + +K +
Sbjct: 298 DRGAEADPAALNSIAVLGGGLMGGGIAYVTACKGGLPVRIKDIQAKGINHALKYSWDLLD 357
Query: 354 GLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPH 413
V R L + + L ++ G DY F D+VIEAV E + LKQ++ E+E+ C P
Sbjct: 358 KQVRRRYLRASERDRQLALISGATDYHGFAHRDVVIEAVFEDLALKQRMVGEIEQCCGPQ 417
Query: 414 CILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVG 473
I A+NTS++ + + + + +++IG HFFSP MPL+E++ T Q I ++ +
Sbjct: 418 TIFASNTSSLPIGEIAAQAARPEKVIGLHFFSPVEKMPLVEVIPHATTDEQTIATVVKLA 477
Query: 474 KIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLD 533
K+ K P+VV + GF VNR PY A L+ G V ID+A+ FG P+GP QLLD
Sbjct: 478 KLQGKTPIVVADRAGFYVNRILAPYINEAMRLLLEGEPVEHIDNALVKFGFPVGPIQLLD 537
Query: 534 LAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTYE---KGSKPK 588
G + AF +R F P ++D +LK R G+ N +G Y YE + SK +
Sbjct: 538 EVGIDTGTKIIPVLETAFGER-FSPPANIIDAILKDDRKGRKNNRGFYLYETKRRKSKKR 596
Query: 589 PDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLD 648
DP++ P+ L+ P + ++ +++ E + ++NE+ R +E IV A D D
Sbjct: 597 ADPAIYPL------LAVASPRAR---LSAQQVAERCVMMMLNEAARCFDEQIVRSARDGD 647
Query: 649 DASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + G + D++GA V L++ + YG F P L A +G
Sbjct: 648 IGAVFGIGFPPFLSGPFRYMDSLGAGEVAAILQRLAAQYGPRFSPCDTLLRMAEQG 703
>gi|432750812|ref|ZP_19985416.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE29]
gi|431296794|gb|ELF86505.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE29]
Length = 714
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 232/715 (32%), Positives = 365/715 (51%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ D++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKDLRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R ++E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCVDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>gi|432417818|ref|ZP_19660422.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE44]
gi|430939062|gb|ELC59285.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE44]
Length = 714
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 230/713 (32%), Positives = 365/713 (51%), Gaps = 33/713 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAIITIDVPDEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKERPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA I V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTQGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDAS 651
++ P+I G+ ++ ++ E + ++NE+ R ++E ++ D D +
Sbjct: 600 AIYPLI-------GTQGQGR---ISAPQVAERCVMLMLNEAVRCVDEQVIRSVRDGDIGA 649
Query: 652 VLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 650 VFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>gi|293410698|ref|ZP_06654274.1| fatty oxidation complex [Escherichia coli B354]
gi|291471166|gb|EFF13650.1| fatty oxidation complex [Escherichia coli B354]
Length = 714
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 230/713 (32%), Positives = 366/713 (51%), Gaps = 33/713 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIANCKTAQEAEALARQGQQLMAE-IHALPVPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+EK C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEKNCAAHIIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDAS 651
++ P+I G+ ++ ++ E + ++NE+ R L+E ++ D D +
Sbjct: 600 AIYPLI-------GTQGQGR---LSAPQVAERCVMLMLNEAVRCLDEQVIRSVRDGDIGA 649
Query: 652 VLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
V G+ FP + GG + D++GA V +++ + YG+ F P L E + +G
Sbjct: 650 VFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMSKRG 702
>gi|330826858|ref|YP_004390161.1| 3-hydroxybutyryl-CoA epimerase [Alicycliphilus denitrificans K601]
gi|329312230|gb|AEB86645.1| 3-hydroxybutyryl-CoA epimerase [Alicycliphilus denitrificans K601]
Length = 699
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 243/711 (34%), Positives = 374/711 (52%), Gaps = 48/711 (6%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DG+AI+ + N PVNAL+ + L + + + + + IVL G+G FSGG DI F
Sbjct: 11 DGIAIVRIQNSPVNALSAQVRGDLYNALQSLSKEEAIVGIVLAGSGRGFSGGADIGEFGG 70
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
G+ P V LIE+ KP+VAA+ G ALGGGLELAMGCHAR+A+ + +LG
Sbjct: 71 PAGSFRAGEDP----ARVTALIEEIDKPVVAAIHGFALGGGLELAMGCHARVASAQARLG 126
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 189
LPE++LGVIPG TQRLPRLVG+SKA+EMML + I +E +GL++ VV + +
Sbjct: 127 LPEISLGVIPGAGGTQRLPRLVGVSKALEMMLSGRPINGKEAALIGLVELVVDDDPVSSA 186
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLAR------LQAKKTAPNM-PQHQ 242
RL I++ D +G + +V + +A+ A +M + +
Sbjct: 187 IRL------------IKNRQAGDGVGHATRFMQVPGAGKDNQAEIEKARSRATSMGAKSK 234
Query: 243 ACLDVIEEGIVHGGYS---GVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV--PNVTD 297
A L VIE G S G+ E + F + + S L HVFFA+RA K+ P +
Sbjct: 235 AALKVIECVAASVGQSFDEGMALEREAFSQCLESPESAALRHVFFAERAAGKLDTPGASG 294
Query: 298 IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 357
+G + V V+GGG MG GIA + I V L E+ + ++ I + +
Sbjct: 295 VGK----ISTVGVVGGGTMGRGIAMSFANAGIPVRLLELTEQKANTAVEAIRLEYQRQMD 350
Query: 358 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 417
RGKL +A +++ + E D+V+EAV E + +K ++ L +AC I+A
Sbjct: 351 RGKLKAAEAAGRSALIQAARNEGEIGLCDLVVEAVFEDMQIKLEMAQRLGRACRDGAIIA 410
Query: 418 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 477
+NTST+D++ + + + +G HFFSPA++M L+E+VR + TSA + ++ V K I
Sbjct: 411 SNTSTLDIDRLAQASGRPADFVGLHFFSPANIMRLVEVVRGKGTSANTLATVVEVVKRIA 470
Query: 478 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGY 537
KVPV+ G C GF NR PY + L+ G +ID AI FG+ +GP +++DLAG
Sbjct: 471 KVPVITGVCWGFVGNRMLEPYLREVESLLLEGASPSQIDHAIEGFGMAMGPCRMMDLAGV 530
Query: 538 GVAAATSKEFDKAFPDRSFQSPLVDLLLKS----GRNGKANGKGLYTYEKGSKPKPDPSV 593
V A +E +A R + PL ++ + GR+G+ G+G Y YE G D
Sbjct: 531 DVVAKVVEE--QAKEGRLPEDPLYRIVSRHLASVGRHGQKTGEGFYRYE-GRVAADDVDT 587
Query: 594 LPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVL 653
+++ ++ + ++ +EIVE + P++NE R+L EGI R+SD+D +
Sbjct: 588 HSLVQAMAARHDVK---QRQDISSEEIVERCMLPLINEGYRLLAEGIASRSSDIDVVWLT 644
Query: 654 GMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYG---NFFKPSRFLEERA 701
G FP GG ++ + +GA ++ L + G N++ P+ L A
Sbjct: 645 GYGFPQALGGPMYHGERLGAAHLLKRLSHYGSTQGNIWNYWTPAAMLAAHA 695
>gi|331658515|ref|ZP_08359459.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TA206]
gi|331054180|gb|EGI26207.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TA206]
Length = 714
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 233/715 (32%), Positives = 366/715 (51%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + + ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVCAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + ++ +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEVLARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQAAKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L ++FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASTEVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + +K + G V
Sbjct: 302 DAPPAPLNSAGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPRGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCATHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ RTSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHARTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R L+E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCLDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E + +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCDRLVEMSERG 702
>gi|383814481|ref|ZP_09969901.1| multifunctional fatty acid oxidation complex subunit alpha
[Serratia sp. M24T3]
gi|383296558|gb|EIC84872.1| multifunctional fatty acid oxidation complex subunit alpha
[Serratia sp. M24T3]
Length = 721
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 237/718 (33%), Positives = 369/718 (51%), Gaps = 37/718 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ D + IIT+ P VN L + A ++K ++ +G F
Sbjct: 22 TLYFTADDIGIITIDVPDEKVNTLKAEFAEQIHGILHTAQQHANLKGLIFVSGKKDSFIA 81
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DI++ + A + + +++ I K P+VAA+ G LGGGLELA+ CH+R
Sbjct: 82 GADISMIARCQQASEAEALAKKGQQVMAQ-IASFKLPVVAAIHGACLGGGLELALACHSR 140
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
I + KTQLGLPE+ LG++PG TQRLPRL+G +KA+++ML +S+ +++ ++GL+D
Sbjct: 141 ICSLDDKTQLGLPEVQLGLLPGSGGTQRLPRLIGAAKALDLMLTGRSLRAKQARRMGLVD 200
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVL-KLARLQAK-KTAP 236
VV LL+ A++ + R L D + R VL L R Q + K+
Sbjct: 201 DVVPQSILLQT----AVERVRKGHQAERGLSYKDSIMQGPLGRAVLFHLVRKQTRAKSKG 256
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
+ P + +DV+ G+ G +G EAK F ELVM S L +FFA A K
Sbjct: 257 HYPATEKIIDVVHIGLTQGSGNGYAAEAKAFGELVMTPESAALRSIFFATTALKK----- 311
Query: 297 DIGLK--PRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEANVR 353
D G + P + KVAV+GGGLMG GIA I + V +K++N + + +K ++
Sbjct: 312 DFGAEAEPLTINKVAVLGGGLMGGGIAGVTITKAGLPVRIKDINQQGISHSLKYSWDLLQ 371
Query: 354 GLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPH 413
RG L + + + +L G DYS F D+VIEAV E + LKQ++ E+E+ H
Sbjct: 372 KKARRGYLKRAELQRQMMLLSGTTDYSGFNQTDLVIEAVFEDLELKQRMIREVEENAAQH 431
Query: 414 CILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVG 473
I A+NTS++ ++ + + +++IG H+FSP MPL+EI+ +TSAQ I +
Sbjct: 432 TIFASNTSSLPIHEIASTAARPEQVIGLHYFSPVDKMPLVEIIPHAKTSAQTIATTVAFA 491
Query: 474 KIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLD 533
+ K +VVG+ GF VNR PY A + G + ID ++ FG P+GP QLLD
Sbjct: 492 RKQGKTAIVVGDSAGFYVNRILAPYINEATRCLIEGETIEHIDKSLMDFGFPVGPLQLLD 551
Query: 534 LAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTY----EKGSKPKP 589
G V AF +R +D +++ R G+ N +G Y Y K S +P
Sbjct: 552 EVGIDVGTKIIPILAAAFGERFAAPKELDAIIRDDRKGRKNSRGFYLYNSKGRKESNKQP 611
Query: 590 DPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
DPS+ ++ N+ P K T ++I + + ++NE+ R L++G + D D
Sbjct: 612 DPSIYGLL-------NVTPKNKQ---TSQQIADRCVALMLNEALRCLDDGTIHSPRDADI 661
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPL 707
+V G+ FP + GG + + D++GA+ + +L+ Q +G F P + L RA G L
Sbjct: 662 GAVFGIGFPPFLGGPMRYIDSLGADRLLKNLQALQQQFGERFAPCQGLVSRAENGQKL 719
>gi|432422685|ref|ZP_19665230.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE178]
gi|430944297|gb|ELC64396.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE178]
Length = 714
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 228/712 (32%), Positives = 368/712 (51%), Gaps = 31/712 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + ++ +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEVLARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQAVKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L ++FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASTDVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKFSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCATHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K+P+VV + GF VNR PY A +++ G + ID+A+ FG P+GP QLLD G
Sbjct: 481 GKMPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDR-SFQSPLVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DPS 592
+ A+ +R S + +V +L R G+ NG+G Y Y +KG K K DP+
Sbjct: 541 IDTGTKIMPVLEAAYGERFSASANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDPA 600
Query: 593 VLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASV 652
+ P+I + G+ ++ ++ E + ++NE+ R L+E ++ D D +V
Sbjct: 601 IYPLI-------GVQGQGR---LSAPQVAERCVMLMLNEAVRCLDEQVIRSVRDGDIGAV 650
Query: 653 LGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
G+ FP + GG + D++GA V +++ + YG+ F P L E + +G
Sbjct: 651 FGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCDRLVEMSERG 702
>gi|260786960|ref|XP_002588524.1| hypothetical protein BRAFLDRAFT_220780 [Branchiostoma floridae]
gi|229273687|gb|EEN44535.1| hypothetical protein BRAFLDRAFT_220780 [Branchiostoma floridae]
Length = 719
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 238/725 (32%), Positives = 376/725 (51%), Gaps = 54/725 (7%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA++ + +PP+N L + + L ++A V++IV+ G G F+ G D+ F
Sbjct: 10 VAVLQINDPPLNVLGHDVRSQLMSGLQQALQDKAVRSIVIMGKGQTFTAGADVKEF---- 65
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G + + ++ +V + KP+V A+ G LGGG+ LA+ H R+A ++GLP
Sbjct: 66 --GTEKVFWEPTLHSLVEAVSAATKPVVTAIHGTTLGGGVALALASHYRLADSSAKMGLP 123
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 191
E+ LG++P TQRLPRLVGL A+ M+ +++++++ GL+D VV ++LLK +
Sbjct: 124 EVQLGILPTCGVTQRLPRLVGLQTAVRMVTSGQTLSAQQALTAGLLDKVV-PDDLLKKAV 182
Query: 192 LWALDI------AARRKPW-IRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 244
+A + A R W + + R + + L AR+ L A + QA
Sbjct: 183 GFARSVDVQGLEARRVSSWTVPDVDRAEDV--LDAARKTLVRRSRGAIAPLTGLQAIQAS 240
Query: 245 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK--VP---NVTDIG 299
L E +G+ +EA++ + L + L + FFA+RA + +P NV
Sbjct: 241 LLPFE--------TGMKREAELGRYLWTSWQAAALRYAFFAERAVKRWHIPRNKNVNYRT 292
Query: 300 LKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRG 359
++P ++ V V+G G MG GI+ + + + VVL EVN L KG + ++ +
Sbjct: 293 VEPMDIKSVGVLGAGTMGIGISISLLQAGLKVVLTEVNKAQLDKGKSYCKFWLKKSNSNT 352
Query: 360 KLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATN 419
+L+ K L+ DYS+ ++VD+VIEAV E + LK+K+F +L+ P ILATN
Sbjct: 353 ELSGGKPQPM--QLRATTDYSQLREVDLVIEAVFEDLALKKKVFRQLDAVTNPRTILATN 410
Query: 420 TSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKV 479
TS +D++ + T D++IG HFFSPA VM LLE + TS + I M +G I KV
Sbjct: 411 TSGLDIDKIAAATQRPDKVIGTHFFSPAQVMRLLENIYGRHTSGETIATAMQLGATIGKV 470
Query: 480 PVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGV 539
V+VGNC GF NR A L+ G D +D A+ FG +GPF++ DLAG V
Sbjct: 471 GVLVGNCPGFVGNRMKGLNFTEAMFLLEEGADPQDVDKALEEFGFAMGPFRVSDLAGGDV 530
Query: 540 -------AAATSKEFDKAFPDRSFQ-----SPLVDLLLKSGRNGKANGKGLYTYEKGSKP 587
A T++ + ++ SPL D+L GR G+ G G Y Y+ GS+
Sbjct: 531 HWRRRIQAGLTTEHGPPPYTPVLYRQGNRYSPLADMLCMQGRFGQKTGAGWYRYKSGSRT 590
Query: 588 K-PDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASD 646
PD V +I + R+ G + +++ +EIVE LFP++NE R+LEEG+ D
Sbjct: 591 ALPDAEVHRLIHKHRQDH----GFQRRNISSQEIVERCLFPLINEGFRILEEGLAAGPQD 646
Query: 647 LDDASVLGMSFPSYRGGIVFWAD-AVGANYVYTSLKKWSQLY--GNFFKPSRFLEERATK 703
+D +LG +P + GG +++AD VG + SL+K+ + + PS L + A +
Sbjct: 647 IDVIFLLGFGWPRHTGGPMYYADKVVGLGNLLQSLEKYRAHHPRSAHWVPSSLLRKMAAQ 706
Query: 704 GIPLS 708
G LS
Sbjct: 707 GTSLS 711
>gi|430003991|emb|CCF19782.1| Peroxisomal bifunctional enzyme [Includes: Enoyl-CoA
hydratase/3,2-trans-enoyl-CoA isomerase ;
3-hydroxyacyl-CoA dehydrogenase] [Rhizobium sp.]
Length = 646
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 232/659 (35%), Positives = 342/659 (51%), Gaps = 36/659 (5%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A++ + NPPVNAL + GL D + V+A+VL G F G D+ F K
Sbjct: 12 IAVVAVNNPPVNALGQMLRQGLWDTVGALDADPSVRAVVLICEGRTFIAGADVTEFGK-- 69
Query: 75 GAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
P V L +V+ IE KP AA+ G ALGGG E+AMGC RIA +G
Sbjct: 70 --------PPVPPHLPDLVDHIEGAAKPWFAAIHGSALGGGFEIAMGCRFRIALDSASVG 121
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 189
LPE+ LG++PG T R PRL G+ A++++ K + + + LGL+DAVV + L
Sbjct: 122 LPEVGLGIVPGASGTVRTPRLAGVEAAVDLVTSGKPVKAAKAAALGLVDAVVMGD-LRSE 180
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
+ +A R P S + G R+ +++ + AP + ACL
Sbjct: 181 AVAFARAALGRPLPLPLSRRPVETPGPGFWERQEKAISKRARGEAAPL--RALACL---- 234
Query: 250 EGIVHGGYSGVLK-EAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 308
V +S + E F EL + + L HVFFA+RA + ++ +P +R
Sbjct: 235 RKAVEADFSDAMAFERATFLELRSSEQAAALRHVFFAERAAGRPSHLA--AAEPLPIRLA 292
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
V+GGG MG+GIA A + + VVL E + E + +G+ I G V RG++T D A
Sbjct: 293 GVVGGGTMGAGIAVALLDAGLPVVLVERDGEAVERGLANIRNVYDGAVKRGRMTPDTAAE 352
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
L ++ G DY+ D D+VIEAV E + +K+ +F+EL + C P +LATNTS +D ++
Sbjct: 353 RLSVVTGKTDYAALADADLVIEAVFEEIGVKRAVFAELGRICRPEAVLATNTSYLDPRLI 412
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
E + +R IG HFFSPA+VM LLEIV T+ V+ +G+++ K+PV G C G
Sbjct: 413 AEGLPNPERFIGLHFFSPANVMKLLEIVPVPETAPAVVATGFALGRMLGKIPVQAGICEG 472
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR Y SA LV GV + ID A+R++G +GPF+ DL G +A +
Sbjct: 473 FIGNRILKRYRASAEALVRQGVAIDAIDGAMRAYGFAMGPFEAQDLGGLDIAFLQREGAR 532
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIM 607
A D L D+L+++GR G+ G G Y Y G + P+P +V + LS+ +
Sbjct: 533 AAGQD--VPETLGDILVRAGRKGQKTGGGWYDYALGDRTPQPSTAVAEL------LSSQI 584
Query: 608 PGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVF 666
G +SV EI E ++ + E +L EG+ +ASD+D + G FP +RGG +F
Sbjct: 585 SGEADMSVV--EIAESLVGEMAEEGAAILSEGVARQASDIDVVEIHGYGFPRWRGGPMF 641
>gi|440899525|gb|ELR50818.1| Peroxisomal bifunctional enzyme [Bos grunniens mutus]
Length = 723
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 243/722 (33%), Positives = 378/722 (52%), Gaps = 46/722 (6%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+ +A+I L NPPVNA++ + G+K+ ++A + D VKAIV+ G G F G DI F
Sbjct: 8 QNCLALIRLRNPPVNAISTTVARGIKESLQKAITDDTVKAIVICGADGIFCAGADIREF- 66
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
KVH D+ L +V+ I+ KKP+VAA++ LALGGGLELA+GCH RIA + Q+
Sbjct: 67 KVHKTFDIQLGD------IVDEIQRNKKPVVAAIQKLALGGGLELALGCHYRIAHAEAQV 120
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
G PE+TLG++PG TQ LPRLVG+ A+++++ + I++ E KLG+ID +V S+ + +
Sbjct: 121 GFPEVTLGILPGARGTQLLPRLVGVPAALDLIISGRHISANEALKLGIIDKIVNSDPIEE 180
Query: 189 VSRLWALDIAAR---RKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACL 245
++ A R + P R + + SL + A LQ +K P +AC+
Sbjct: 181 -----SIKFAQRISDQSPESRRICNM-PVPSLPNMDAIFSEALLQVRKRYPGWLSPEACV 234
Query: 246 DVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP--- 302
++ + + G KE ++ L ++ L +VFFA+R +K + K
Sbjct: 235 QAVQAAVQYPYDMGSKKEKELGLYLNTSGQAKALQYVFFAERMANKWSTPSGASWKTALG 294
Query: 303 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 362
R + V V+G G MG GI + I V+ E + + L K I + + + K+
Sbjct: 295 RPISSVGVLGLGTMGRGIVISFAKAQIPVIAVESDKKQLETASKIITSILEKEAS--KMQ 352
Query: 363 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 422
Q + + E VD+V+EAV E + LK+ +F+EL C P +L TNTS
Sbjct: 353 QSGRPWSGPKPRLTTSMKELSGVDLVVEAVYEDMNLKKHVFAELSAVCKPEALLCTNTSA 412
Query: 423 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 482
+D++ + + +IG HFFSPAHVM LLE++ + +S I +M + K IKK+ VV
Sbjct: 413 LDIDEIASSSDRPHLVIGTHFFSPAHVMKLLEVIPSRFSSPTTIATVMNLSKKIKKIGVV 472
Query: 483 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAA 542
VGNC GF NR Y L+ G ID + FG +GPF++ DLAG +
Sbjct: 473 VGNCFGFVGNRMLRSYYDQTYFLLEEGSKPEEIDEVLEEFGFKMGPFRVSDLAGLDIGWK 532
Query: 543 TSKEFDKAFPD------------RSFQSPLVDLLLKSGRNGKANGKGLYTYEK--GSKPK 588
+ K P R + P+ D+L +SGR G+ GKG Y Y+K G K
Sbjct: 533 SRKRQGLTGPTLPPGSSARKRGGRRY-CPIPDMLCESGRFGQKTGKGWYLYDKPLGRIHK 591
Query: 589 PDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLD 648
PDP + + + R +I KP ++ EI+E L+ ++NE+ R+L EG+ +D
Sbjct: 592 PDPWLSQFLTQYRETYHI----KPRIISWDEILERCLYSLINEAFRILGEGMATIPEHID 647
Query: 649 DASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF--FKPSRFLEERATKG-I 705
+ G +P +RGG +F+A VG V L+K+ + + +P +L++ A++G +
Sbjct: 648 VIYLHGYGWPRHRGGPMFYASTVGLPTVLEKLQKYHRQNPDIPQLEPCDYLKKLASQGNL 707
Query: 706 PL 707
PL
Sbjct: 708 PL 709
>gi|336251395|ref|YP_004595105.1| multifunctional fatty acid oxidation complex subunit alpha
[Enterobacter aerogenes KCTC 2190]
gi|334737451|gb|AEG99826.1| multifunctional fatty acid oxidation complex subunit alpha
[Enterobacter aerogenes KCTC 2190]
Length = 714
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 234/721 (32%), Positives = 377/721 (52%), Gaps = 38/721 (5%)
Query: 2 AAPRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVK-AIVLTGNG 58
AA T+E+ D +A+IT+ P +N L ++ + ++ A+ ++
Sbjct: 3 AATAFTLEIRPDNIAVITIDAPGEKMNTLKAEFGGEVRTIIRQLRENKALRGAVFISAKP 62
Query: 59 GRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAM 118
F G DIN+ + A + + + +++ I P++AA+ G GGGLELA+
Sbjct: 63 DNFIAGADINMIARCTSAAEAEALARQG-QQIMSEIHALSIPVIAAIHGACFGGGLELAL 121
Query: 119 GCHARIAAP--KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWK 173
CH R+ + KT+LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + + K
Sbjct: 122 ACHGRVCSDDDKTRLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRPRQALK 181
Query: 174 LGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVL--KLARLQA 231
GL+D VV LL+ A+++A + +P R++ +++ + R++L +A+
Sbjct: 182 AGLVDDVVPQSILLRT----AVELALQGRPASRTVPVRERVLAGPLGRQLLFRMVAKKTR 237
Query: 232 KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 291
+KT N P + L VIE G+ HG SG +EA+ F EL M S+ L +FFA K
Sbjct: 238 QKTQGNYPAAERILQVIENGLAHGCSSGYAEEARAFGELAMTPQSQALRSIFFASTDLKK 297
Query: 292 VPNVTDIGLK--PRGVRKVAVIGGGLMGSGIATAHILNN-IYVVLKEVNSEYLLKGIKTI 348
D G + P + +AV+GGGLMG GIA + V +K++ ++ + ++
Sbjct: 298 -----DRGAEADPAPLNSIAVLGGGLMGGGIAYVTACKGGLPVRIKDIQAKGINHALRYS 352
Query: 349 EANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEK 408
+ V R L + + L ++ G DY F D+VIEAV E + LKQ++ E+E+
Sbjct: 353 WELLDKQVRRRYLRASERDRQLALISGATDYHGFAHRDVVIEAVFEDLALKQRMVGEIEQ 412
Query: 409 ACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILD 468
C P I A+NTS++ + + + + +++IG HFFSP MPL+E++ T Q I
Sbjct: 413 CCGPQTIFASNTSSLPIGEIAAQAARPEKVIGLHFFSPVEKMPLVEVIPHATTDEQTIAT 472
Query: 469 LMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGP 528
++ + K+ K P+VV + GF VNR PY A L+ G V ID+A+ FG P+GP
Sbjct: 473 VVKLAKLQGKTPIVVADRAGFYVNRILAPYINEAMRLLLEGEPVEHIDNALVKFGFPVGP 532
Query: 529 FQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTYE---K 583
QLLD G + AF +R F P ++D +LK R G+ N +G Y YE +
Sbjct: 533 IQLLDEVGIDTGTKIIPVLETAFGER-FSPPANIIDAILKDDRKGRKNNRGFYLYETKRR 591
Query: 584 GSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVR 643
SK + DP++ P+ L+ P + ++ +++ E + ++NE+ R +E IV
Sbjct: 592 KSKKRADPAIYPL------LAVASPQAR---LSAQQVAERCVMMMLNEAARCFDEQIVRS 642
Query: 644 ASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATK 703
A D D +V G+ FP + GG + D++GA V L++ + YG F P L A +
Sbjct: 643 ARDGDIGAVFGIGFPPFLGGPFRYMDSLGAGEVAAILQRLAAQYGPRFSPCDTLLRMAEQ 702
Query: 704 G 704
G
Sbjct: 703 G 703
>gi|386619960|ref|YP_006139540.1| Enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase /
3-hydroxybutyryl-CoA epimerase [Escherichia coli NA114]
gi|387830270|ref|YP_003350207.1| hypothetical protein ECSF_2217 [Escherichia coli SE15]
gi|432500875|ref|ZP_19742632.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE216]
gi|432559587|ref|ZP_19796256.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE49]
gi|432695202|ref|ZP_19930400.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE162]
gi|432711391|ref|ZP_19946450.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE6]
gi|432919851|ref|ZP_20123917.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE173]
gi|432927738|ref|ZP_20129135.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE175]
gi|432981762|ref|ZP_20170537.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE211]
gi|433097204|ref|ZP_20283387.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE139]
gi|433106648|ref|ZP_20292621.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE148]
gi|281179427|dbj|BAI55757.1| conserved hypothetical protein [Escherichia coli SE15]
gi|333970461|gb|AEG37266.1| Enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase /
3-hydroxybutyryl-CoA epimerase [Escherichia coli NA114]
gi|431028452|gb|ELD41496.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE216]
gi|431090807|gb|ELD96558.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE49]
gi|431233290|gb|ELF28881.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE162]
gi|431248720|gb|ELF42909.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE6]
gi|431442879|gb|ELH23958.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE173]
gi|431443536|gb|ELH24563.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE175]
gi|431491071|gb|ELH70678.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE211]
gi|431614785|gb|ELI83919.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE139]
gi|431626575|gb|ELI95121.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE148]
Length = 714
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 228/712 (32%), Positives = 368/712 (51%), Gaps = 31/712 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + ++ +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEVLARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQAVKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L ++FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASTDVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKFSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCATHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K+P+VV + GF VNR PY A +++ G + ID+A+ FG P+GP QLLD G
Sbjct: 481 GKMPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDR-SFQSPLVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DPS 592
+ A+ +R S + +V +L R G+ NG+G Y Y +KG K K DP+
Sbjct: 541 IDTGTKIMPVLEAAYGERFSASANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDPA 600
Query: 593 VLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASV 652
+ P+I + G+ ++ ++ E + ++NE+ R L+E ++ D D +V
Sbjct: 601 IYPLI-------GVQGQGR---LSAPQVAERCVMLMLNEAVRCLDEQVIRSVRDGDIGAV 650
Query: 653 LGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
G+ FP + GG + D++GA V +++ + YG+ F P L E + +G
Sbjct: 651 FGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCDRLVEMSERG 702
>gi|290508408|ref|ZP_06547779.1| fatty oxidation complex, alpha subunit FadJ [Klebsiella sp. 1_1_55]
gi|289777802|gb|EFD85799.1| fatty oxidation complex, alpha subunit FadJ [Klebsiella sp. 1_1_55]
Length = 714
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 234/715 (32%), Positives = 369/715 (51%), Gaps = 38/715 (5%)
Query: 8 MEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGG 64
+EV D +A+IT+ P +N L ++ V+ +V ++ F G
Sbjct: 9 LEVRADKIAVITIDAPGEKMNTLKAEFGNQVRGLIRRVRDDKSVRGVVFISAKADNFIAG 68
Query: 65 FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
DIN+ + A + + +++ I P++AA+ G LGGGLELA+ CH RI
Sbjct: 69 ADINMIARCRSAQEAEALARQGQQIMAE-IHGLSIPVIAAIHGACLGGGLELALACHGRI 127
Query: 125 AA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDA 179
+ KT+LGLPE+ LG++PG TQRLPRL+G+S A++MML + + + + K GL+D
Sbjct: 128 CSDDEKTRLGLPEVQLGLLPGSGGTQRLPRLIGVSTALDMMLTGRQLRARQALKAGLVDE 187
Query: 180 VVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLK--LARLQAKKTAPN 237
VV LL+ A+++A + +P R + +++ + R +L + + +KT N
Sbjct: 188 VVPQAILLQA----AVELALKGRPASRDMPVRERVLAGPLGRHLLFHFVGKQTQRKTQGN 243
Query: 238 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 297
P + L V+E G+ HG SG +EA+ F EL M S+ L +FFA K D
Sbjct: 244 YPAVKRILQVVENGLTHGCSSGYAEEARAFGELAMTPQSQALRSIFFASTDLKK-----D 298
Query: 298 IGLK--PRGVRKVAVIGGGLMGSGIATAHILNN-IYVVLKEVNSEYLLKGIKTIEANVRG 354
G + P + +AV+GGGLMG GIA + V +K++ + +K +
Sbjct: 299 RGAEAEPGPLTSIAVLGGGLMGGGIAYVTACKGGLPVRIKDIQPRGINHALKYSWDLLNK 358
Query: 355 LVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHC 414
V + +L + + + ++ G DY F D+VIEAV E + LKQ++ SE+E+ C P
Sbjct: 359 QVRQRRLRPSERDRQMALISGATDYQGFAHRDVVIEAVFEDLALKQRMVSEVEQYCGPQT 418
Query: 415 ILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGK 474
I A+NTS++ + + S +++IG HFFSP MPL+E++ + T Q I ++ + K
Sbjct: 419 IFASNTSSLPIGDIAAHASRPEQVIGLHFFSPVEKMPLVEVIPHKGTDPQAIATVVQLAK 478
Query: 475 IIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDL 534
K P+VV + GF VNR PY A L+ G V ID A+ FG P+GP QLLD
Sbjct: 479 RQGKTPIVVADKAGFYVNRILAPYINEAMRLLVEGEPVEEIDKALVKFGFPVGPIQLLDE 538
Query: 535 AGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTYE---KGSKPKP 589
G + AF +R F P ++D++LK R G+ N +G Y YE + SK +P
Sbjct: 539 VGIDTGTKIIPVLESAFGER-FSPPANIIDVILKDDRKGRKNNRGFYLYETKGRKSKKRP 597
Query: 590 DPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
DP+V P++ R S + + +++ E + ++NE+ R +E I+ A D D
Sbjct: 598 DPAVYPLLGIDRPQSRL---------SAQQVAERCVMMMLNEAARCFDEQIIRSARDGDI 648
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D +GA V L++ + YG F P L A +G
Sbjct: 649 GAVFGIGFPPFLGGPFRYMDTIGAGEVAAILQRLAAQYGPRFTPCDTLLRMAEQG 703
>gi|420337039|ref|ZP_14838608.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
K-315]
gi|391260778|gb|EIQ19832.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
K-315]
Length = 714
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 232/715 (32%), Positives = 367/715 (51%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAIITIDVPDEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IA--APKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ APKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDAPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+E++ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVELIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R ++E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCVDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>gi|432802558|ref|ZP_20036537.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE84]
gi|431348347|gb|ELG35205.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE84]
Length = 714
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 232/715 (32%), Positives = 366/715 (51%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + ++ +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEVLARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQAVKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L ++FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASTEVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPRGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCATHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIMPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGCKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R L+E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCLDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E + +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCDRLVEMSERG 702
>gi|331663858|ref|ZP_08364768.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TA143]
gi|331059657|gb|EGI31634.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TA143]
Length = 714
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 229/713 (32%), Positives = 365/713 (51%), Gaps = 33/713 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLCENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIANCKTAQEAEALARQGQQLMAE-IHALPVPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 MCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPQSILLEA----AVELAKQERPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGSSSGYDAEARAFGELAMTPQSEALRSIFFASTEVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDRQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDAS 651
++ P+I G+ ++ ++ E + ++NE+ R L+E ++ D D +
Sbjct: 600 AIYPLI-------GTQGQGR---LSAPQVAERCVMLMLNEAVRCLDEQVIRSVRDGDIGA 649
Query: 652 VLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
V G+ FP + GG + D++GA V +++ + YG+ F P L E + +G
Sbjct: 650 VFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMSKRG 702
>gi|311278706|ref|YP_003940937.1| fatty acid oxidation complex subunit FadJ [Enterobacter cloacae
SCF1]
gi|308747901|gb|ADO47653.1| fatty acid oxidation complex, alpha subunit FadJ [Enterobacter
cloacae SCF1]
Length = 715
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 235/697 (33%), Positives = 366/697 (52%), Gaps = 35/697 (5%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSGGFDINV 69
D VA+I + P +N L A ++ ++ ++ +VL + F G DIN+
Sbjct: 14 DNVAVIAIDVPGEKMNTLKAEFGAQVRAILKQVRDNRSLRGVVLISAKPDNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA--P 127
A + + +++ I P++AA+ G LGGGLELA+ CH RI
Sbjct: 74 IGGCRTAQEAEALARQGQQIMAE-IHALSVPVIAAIHGACLGGGLELALACHGRICTDDA 132
Query: 128 KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 184
KT LGLPE+ LG++PG TQRLPRLVG+S A+EM+L K + + + + GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALEMILTGKQLRARQALRAGLVDEVVPHS 192
Query: 185 ELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVL--KLARLQAKKTAPNMPQHQ 242
LL A+++A + +P R L ++L + AR VL + + +KT N P
Sbjct: 193 ILLDA----AVEMAKKERPASRRLPVRERLLAGPLARNVLFSLVGKKTEQKTQGNYPATG 248
Query: 243 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 302
L VIE G+ HG SG EA+ F EL M S+ L +FFA K P L
Sbjct: 249 KILQVIETGLSHGISSGYEAEARAFGELAMTPQSKALRGIFFASTDVKKDPGAPVEALP- 307
Query: 303 RGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 361
+R AV+GGGLMG GIA A + V +K++NS + +K + V R L
Sbjct: 308 --LRSAAVLGGGLMGGGIAFALASKAQLPVRIKDINSLGINHALKYSWELLDAKVRRRHL 365
Query: 362 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 421
+ ++ + ++ G DY F D+VIEAV E + LKQ++ +++E+ PH I A+NTS
Sbjct: 366 KAAERDSQMALISGTTDYRGFAHRDVVIEAVFEDLALKQQMVADVERQFAPHTIFASNTS 425
Query: 422 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 481
++ + + + +++IG HFFSP MPL+E++ TS + ++ + + + K P+
Sbjct: 426 SLPIGDIAAHAARAEQVIGLHFFSPVEKMPLVEVIPHAGTSDATVATVVRLARQMGKTPI 485
Query: 482 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAA 541
VV + GF VNR PY A +++ GV + +ID+A+ FG P+GP QLLD G
Sbjct: 486 VVADKAGFYVNRILAPYINEAMRMLTEGVSIEQIDNALVKFGFPVGPIQLLDEVGIDTGT 545
Query: 542 ATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKG--SKPKPDPSVLPI 596
+ A+ +R F +P ++ +L R G+ NG+G Y Y KG SK +PDP++
Sbjct: 546 KIIPVLENAYGER-FSAPANIISAILNDDRKGRKNGRGFYLYGAKGRKSKKRPDPAIY-- 602
Query: 597 IEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMS 656
N++ G+ S+T+++I E + ++NES R +E +V A D D +V G+
Sbjct: 603 --------NLIGNGQKSSLTDQQIAERCVMMMLNESARCFDEQVVRSARDGDIGAVFGIG 654
Query: 657 FPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKP 693
FP + GG + D +GA V +L++ + YG F P
Sbjct: 655 FPPFLGGPFRYMDTLGAGNVVATLQRLATQYGARFAP 691
>gi|421774531|ref|ZP_16211143.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli AD30]
gi|408460279|gb|EKJ84058.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli AD30]
Length = 714
Score = 343 bits (881), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 229/713 (32%), Positives = 364/713 (51%), Gaps = 33/713 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKERPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA I V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTQGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDAS 651
++ P+I G+ ++ ++ E + ++NE+ R ++E ++ D D +
Sbjct: 600 AIYPLI-------GTQGQGR---ISAPQVAERCVMLMLNEAVRCVDEQVIRSVRDGDIGA 649
Query: 652 VLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 650 VFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>gi|432466550|ref|ZP_19708638.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE205]
gi|432584594|ref|ZP_19820987.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE57]
gi|433073590|ref|ZP_20260243.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE129]
gi|433120937|ref|ZP_20306609.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE157]
gi|433184063|ref|ZP_20368311.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE85]
gi|430993356|gb|ELD09710.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE205]
gi|431115590|gb|ELE19088.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE57]
gi|431587494|gb|ELI58868.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE129]
gi|431642538|gb|ELJ10261.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE157]
gi|431705950|gb|ELJ70538.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE85]
Length = 714
Score = 343 bits (881), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 230/715 (32%), Positives = 367/715 (51%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKVEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DI + A + ++ +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADIKMIGNCKTAQEAEVLARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQAVKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L ++FFA K P +
Sbjct: 243 NYPTTERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASTEVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCATHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G + ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIMPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R L+E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCLDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E + +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCNRLVEMSERG 702
>gi|419366162|ref|ZP_13907323.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC13E]
gi|378212471|gb|EHX72794.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC13E]
Length = 712
Score = 343 bits (881), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 232/715 (32%), Positives = 366/715 (51%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 6 TLNVRLDNIAIITIDVPDEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 65
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 66 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 124
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 125 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 184
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 185 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 240
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 241 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 299
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 300 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 358
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 359 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 418
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 419 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 478
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 479 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 538
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 539 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 597
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R ++E ++ D D
Sbjct: 598 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCVDEQVIRSVRDGDI 645
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 646 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 700
>gi|417122429|ref|ZP_11971687.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
97.0246]
gi|386147709|gb|EIG94149.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
97.0246]
Length = 714
Score = 343 bits (881), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 232/719 (32%), Positives = 367/719 (51%), Gaps = 37/719 (5%)
Query: 3 APRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGG 59
A T+ V D +AIIT+ P +N L + ++ ++ +++ +V ++
Sbjct: 4 ASAFTLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPD 63
Query: 60 RFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMG 119
F G DIN+ A + + +L+ I P++AA+ G LGGGLELA+
Sbjct: 64 NFIAGADINMIGNCKTAQEAEALARQGQQLMAE-IHALPVPVIAAIHGACLGGGLELALA 122
Query: 120 CHARIAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKL 174
CH R+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KL
Sbjct: 123 CHGRMCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKL 182
Query: 175 GLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAK 232
GL+D VV LL+ A+++A + +P R L +++ G L A + +
Sbjct: 183 GLVDDVVPQSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEH 238
Query: 233 KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 292
KT N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K
Sbjct: 239 KTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKD 298
Query: 293 PNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANV 352
P +D P + G G TA + V +K++N + + +K +
Sbjct: 299 PG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLSVRIKDINPQGINHALKYSWDQL 356
Query: 353 RGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPP 412
G V R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C
Sbjct: 357 EGKVRRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCAT 416
Query: 413 HCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTV 472
H I A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + +
Sbjct: 417 HTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKL 476
Query: 473 GKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLL 532
K K P+VV + GF VNR PY A +++ G + ID+A+ FG P+GP QLL
Sbjct: 477 AKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHIDAALVKFGFPVGPIQLL 536
Query: 533 DLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP 589
D G + A+ +R F +P +V +L R G+ NG+G Y Y +KG K K
Sbjct: 537 DEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKK 595
Query: 590 --DPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRAS 645
DP++ P+I + RLS ++ E + ++NE+ R L+E ++
Sbjct: 596 QVDPAIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCLDEQVIRSVR 643
Query: 646 DLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
D D +V G+ FP + GG + D++GA V +++ + YG+ F P L E + +G
Sbjct: 644 DGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMSKRG 702
>gi|191173765|ref|ZP_03035287.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli F11]
gi|300986886|ref|ZP_07177866.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
200-1]
gi|422373220|ref|ZP_16453542.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
60-1]
gi|432471706|ref|ZP_19713751.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE206]
gi|432714118|ref|ZP_19949157.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE8]
gi|433078518|ref|ZP_20265054.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE131]
gi|190905913|gb|EDV65530.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli F11]
gi|300306341|gb|EFJ60861.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
200-1]
gi|324015420|gb|EGB84639.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
60-1]
gi|430997710|gb|ELD13966.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE206]
gi|431256413|gb|ELF49486.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE8]
gi|431596213|gb|ELI66174.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE131]
Length = 714
Score = 343 bits (881), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 231/710 (32%), Positives = 367/710 (51%), Gaps = 38/710 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + ++ +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEVLARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQAVKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L ++FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASTEVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCATHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G + ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHIDTALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIMPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R L+E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCLDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKP-SRFLE 698
+V G+ FP + GG + D++GA V +++ + YG+ F P +RF+E
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCNRFVE 697
>gi|331684013|ref|ZP_08384609.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli H299]
gi|450191006|ref|ZP_21891064.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli SEPT362]
gi|331078965|gb|EGI50167.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli H299]
gi|449319906|gb|EMD09950.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli SEPT362]
Length = 714
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 230/713 (32%), Positives = 366/713 (51%), Gaps = 33/713 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIANCKTAQEAEALARQGQQLMAE-IHALPVPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQAVKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+VIE G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVIENGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAQPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDRQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDTALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDAS 651
++ P+I G+ ++ ++ E + ++NE+ R L+E ++ D D +
Sbjct: 600 AIYPLI-------GTQGQGR---LSAPQVAERCVMLMLNEAVRCLDEQVIRSVRDGDIGA 649
Query: 652 VLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
V G+ FP + GG + D++GA V +++ + YG+ F P L E + +G
Sbjct: 650 VFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMSKRG 702
>gi|419346010|ref|ZP_13887384.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC13A]
gi|419350424|ref|ZP_13891762.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC13B]
gi|419355892|ref|ZP_13897149.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC13C]
gi|419360985|ref|ZP_13902202.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC13D]
gi|432810034|ref|ZP_20043927.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE101]
gi|378185458|gb|EHX46083.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC13A]
gi|378200154|gb|EHX60610.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC13C]
gi|378200602|gb|EHX61057.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC13B]
gi|378202632|gb|EHX63059.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC13D]
gi|431362802|gb|ELG49380.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE101]
Length = 714
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 232/715 (32%), Positives = 366/715 (51%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAIITIDVPDEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R ++E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCVDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>gi|322831930|ref|YP_004211957.1| fatty acid oxidation complex, subunit alpha FadJ [Rahnella sp.
Y9602]
gi|384257038|ref|YP_005400972.1| multifunctional fatty acid oxidation complex subunit alpha
[Rahnella aquatilis HX2]
gi|321167131|gb|ADW72830.1| fatty acid oxidation complex, alpha subunit FadJ [Rahnella sp.
Y9602]
gi|380753014|gb|AFE57405.1| multifunctional fatty acid oxidation complex subunit alpha
[Rahnella aquatilis HX2]
Length = 733
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 249/711 (35%), Positives = 374/711 (52%), Gaps = 45/711 (6%)
Query: 15 VAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSGGFDINVFQ 71
V IIT+ P VN L + ++A ++K +VL +G F G DI +
Sbjct: 31 VGIITIDVPGEKVNTLRAEFAQQICAILQKAQQYPNLKGLVLISGKPDSFIAGADITMIS 90
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA--PKT 129
A + S + + V++ I P+VAA+ G LGGGLELA+ CHAR+ + KT
Sbjct: 91 GCRTAAEASELAQKG-QTVMSQIASFSVPVVAAIHGSCLGGGLELALACHARVCSLDEKT 149
Query: 130 QLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL 186
QLGLPE+ LG++PG TQRLPRL+G KA+E+ML +S+ +++ ++GL+D V L
Sbjct: 150 QLGLPEVQLGLLPGSGGTQRLPRLIGAPKALELMLTGRSVRAKQALRMGLVDDAVPYSIL 209
Query: 187 LKVSRLWALD-IAARRK-----PWIRSLHRTDKLGSLSEAREVLKLARLQAK-KTAPNMP 239
L+ AL+ +A RK PW L G L ++ + R Q + KT N P
Sbjct: 210 LQT----ALERVAKGRKSRPPLPWQARLAG----GPLGKSL-LFHFVRKQTQAKTHGNYP 260
Query: 240 QHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIG 299
+ +DV++ G+ G SG EAK F ELVM S L +FFA A K
Sbjct: 261 ATEKIIDVVKTGLDQGSGSGYQAEAKAFGELVMTPESAALRGLFFASTALKKEKGGD--- 317
Query: 300 LKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKT----IEANVRG 354
+P VR+ ++GGGLMG GIA + V +K++N E + +K +E VRG
Sbjct: 318 AEPLPVRRAGILGGGLMGGGIANVTATKAGLPVRIKDINHEGIRHALKYSWDLLEKKVRG 377
Query: 355 LVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHC 414
+LT+++ + ++ G DYS F +D+V+EAV E + LKQ + +E+E+ PH
Sbjct: 378 R----RLTRNEQQRQMMLISGTTDYSGFAQIDIVVEAVFEDLLLKQAMVAEIEQNAAPHT 433
Query: 415 ILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGK 474
I A+NTS++ ++ + E+ +++IG H+FSP MPL+E++ TSAQ I +++ +
Sbjct: 434 IFASNTSSLPIHKIAEQADRPEQVIGLHYFSPVDKMPLVEVIPHAGTSAQTISTTVSLAR 493
Query: 475 IIKKVPVVVGNCTGFAVNRAFFPY-SQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLD 533
K +VVG+ GF VNR PY +++AR L++ G V ID A+ +FG P+GP QLLD
Sbjct: 494 KQGKTAIVVGDSAGFYVNRILAPYINEAARCLLA-GEPVDHIDKALVNFGFPVGPIQLLD 552
Query: 534 LAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSV 593
G V AF +R D +LK R G+ NGKG Y Y + + V
Sbjct: 553 EVGIDVGTKIGPILVDAFGERFAAPSGFDAVLKDDRKGRKNGKGFYLYGQKGRATKKKQV 612
Query: 594 LPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVL 653
P I RL N+ P + +E EI + ++NE+ R L+E ++ A D D +V
Sbjct: 613 DPAI---YRLLNVTP---KVQQSEDEIAHRCVMLMLNEAVRCLDENVIRSARDGDLGAVF 666
Query: 654 GMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
G+ FP + GG + D +G V +L++ + YG F P L RA +G
Sbjct: 667 GIGFPPFLGGPFRYMDQLGIASVVKTLERLAHQYGERFTPCEGLLRRAHQG 717
>gi|187730524|ref|YP_001881164.1| multifunctional fatty acid oxidation complex subunit alpha
[Shigella boydii CDC 3083-94]
gi|254788616|sp|B2TWV4.1|FADJ_SHIB3 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|187427516|gb|ACD06790.1| fatty oxidation complex, alpha subunit FadJ [Shigella boydii CDC
3083-94]
Length = 714
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 232/715 (32%), Positives = 366/715 (51%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAIITIDVPDEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTKGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R ++E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCVDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>gi|390168303|ref|ZP_10220267.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingobium indicum B90A]
gi|389589183|gb|EIM67214.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingobium indicum B90A]
Length = 654
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 236/669 (35%), Positives = 349/669 (52%), Gaps = 38/669 (5%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+G+ + PPVNAL + L D EA + V+A+V+ G F G DI F
Sbjct: 13 REGIGECVVDAPPVNALGRDVRQALLDAVAEAAADPVVEALVIRCAGRTFFAGADIREF- 71
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
G L P S+ V+ IED KPI+AA+ G ALGGGLE+A+G H RIA +
Sbjct: 72 -----GKPPLPP--SLPEVIAAIEDSAKPIIAAIHGTALGGGLEVALGAHRRIAVSSARF 124
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
GLPE+ LG++PG TQRLPRLVG+ KA+ M++ I++EE + GL+D V L++
Sbjct: 125 GLPEVKLGLLPGAGGTQRLPRLVGVGKALAMIVGGDPISAEEALEAGLLDRKVADGTLIE 184
Query: 189 VSRLWALDIAARRKPWIRS----LHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 244
+R +A + A P +R+ + D++ ++ + R + AP AC
Sbjct: 185 AARQFAREAAGEGAP-VRTRDLPVADPDRVDTVLDEYGNANPRRFGGQD-AP-----AAC 237
Query: 245 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPR 303
++VI +G+ + E F L S L HVFFA+R SKV + D P
Sbjct: 238 VEVIRKGLRVPFDEALALERAAFTRLRDGAQSAALRHVFFAEREVSKVAGIDADTPRLP- 296
Query: 304 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQ 363
+ + VIG G MG GIA A + + VVL E E L G+ + + V G++ +
Sbjct: 297 -IDRAGVIGAGTMGRGIAMALLAAGLPVVLVEQRREALDAGLAAVRDLIARAVKGGRMDR 355
Query: 364 DKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI 423
A+ A L G L Y + +VD+VIEA E++ +KQ IF L+ P ILATNTS +
Sbjct: 356 ASADAASARLTGSLSYDDLAEVDLVIEAAFETMEVKQVIFRALDGVAKPTAILATNTSYL 415
Query: 424 DLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVV 483
D++ + TS ++++G HFFSPA++M LLEIVR RTS QV+ + + K + K+ VV
Sbjct: 416 DVDAIAACTSRPEQVLGLHFFSPANIMKLLEIVRGARTSPQVLATALDLAKRLGKIAVVA 475
Query: 484 GNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAAT 543
GN GF NR +A + G + ID + +FG+P+GPF++ DLAG +
Sbjct: 476 GNAHGFIGNRMLMVRRLAAEAMALEGASPYAIDRVLVAFGMPMGPFRIGDLAGLDLGWT- 534
Query: 544 SKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRL 603
P+ S S + + L + GR G+ G G Y Y+ + +P P V II E
Sbjct: 535 --------PETSTGSTIRERLNERGRRGQKVGAGFYDYDDEGRARPSPEVERIIAELAAD 586
Query: 604 SNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGG 663
I +++ I+ +L P++ E R++ EGI RASD+D V G +P +RGG
Sbjct: 587 KGI----PQRDWSDEAILAGLLDPMIEEGRRIVAEGIAQRASDVDMVWVHGYGWPRWRGG 642
Query: 664 IVFWADAVG 672
+++AD G
Sbjct: 643 PLYYADHRG 651
>gi|300936924|ref|ZP_07151809.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
21-1]
gi|432680960|ref|ZP_19916334.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE143]
gi|300457963|gb|EFK21456.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
21-1]
gi|431220357|gb|ELF17737.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE143]
Length = 714
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 230/715 (32%), Positives = 368/715 (51%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + ++ +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEVLARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ KT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDAKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPQSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L ++FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASTEVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V++K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVIIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCATHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K+P+VV + GF VNR PY A +++ G + ID+A+ FG P+GP QLLD G
Sbjct: 481 GKMPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R L+E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCLDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E + +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMSKRG 702
>gi|395839843|ref|XP_003792785.1| PREDICTED: peroxisomal bifunctional enzyme [Otolemur garnettii]
Length = 723
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 245/722 (33%), Positives = 380/722 (52%), Gaps = 53/722 (7%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
++ +A+I L NPPVNA++ ++ G+K+ ++A S VKAIV+ G G+FS G DI FQ
Sbjct: 8 HNYLALIRLRNPPVNAISAAVLQGIKEGLQKAKSDQTVKAIVICGTEGKFSAGADIRSFQ 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
G ++L P +V+ ++ +KP+VAA++GLALGGGLELA+GCH RIA + L
Sbjct: 68 TPRTFG-IALGP------IVDDMQRNEKPVVAAIQGLALGGGLELALGCHYRIAHAEAYL 120
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS---EE 185
PE+TLG++PG TQ LPRL+G+ A+++++ + I + E KLGL+D VV S EE
Sbjct: 121 AFPEVTLGILPGARGTQLLPRLIGVPAALDLIVSGRFILAGEALKLGLLDKVVNSDPVEE 180
Query: 186 LLK-VSRLWALDIAARR---KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 241
+K V + + +RR KP I+ + D + SEA LQ +K P
Sbjct: 181 AIKFVQTVLDQPLESRRLYNKP-IQIVPYMDTI--FSEAF-------LQVQKKYPGQLAP 230
Query: 242 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGL- 300
+AC+ ++ + + G+ KE ++F L +R L + FFA+R K +
Sbjct: 231 EACVRAVQAAVQYPYEEGIKKEQELFMYLQQSGQARALQYAFFAEREACKWSTPSGASWT 290
Query: 301 --KPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTR 358
R + V V+G G MG GI + I V+ E + L K I + + +
Sbjct: 291 TASARPISSVGVVGLGTMGRGIVISFAKAKIPVIAVESDKNQLETANKIITSTLEKEAS- 349
Query: 359 GKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 418
K+ Q + + + E VD+V+EAV E + LK+++F+EL C P L T
Sbjct: 350 -KMQQSGYSWSGPKPRLTTSMKELGGVDLVVEAVFEEMNLKKRVFAELSAVCKPEAFLCT 408
Query: 419 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKK 478
NTS +D++ + T+ +IG HFFSPAHVM LLE++ + +S I +M + K I+K
Sbjct: 409 NTSALDIDEIASSTNRPHLVIGTHFFSPAHVMKLLEVIPSRYSSPTTIATVMELSKKIQK 468
Query: 479 VPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYG 538
VVVGNC GF NR PY L+ G ID + FG +GPF++ DLAG
Sbjct: 469 FGVVVGNCFGFVGNRMLNPYYNQTYFLLEEGSKPEEIDQVLEEFGFKMGPFRVSDLAGLD 528
Query: 539 VAAATSKEFDKAFP------------DRSFQSPLVDLLLKSGRNGKANGKGLYTYEK--G 584
V + K P +R + P+ D+L + GR G+ GKG Y Y+K G
Sbjct: 529 VGWKSRKGQGLTGPMLPPGTPARKRGNRRY-CPIPDMLCELGRFGQKTGKGWYQYDKPLG 587
Query: 585 SKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRA 644
+PDP + + + R +I +P ++ EI+E L+ ++NE+ R+L EGI
Sbjct: 588 RICEPDPWIYKFLSQYRETYHI----EPRIISRDEILERCLYSLINEAFRILGEGIAASP 643
Query: 645 SDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF--FKPSRFLEERAT 702
+D + G +P +RGG +F+A VG + L+K+ + + +PS +L++ A+
Sbjct: 644 EHIDVIYLHGYGWPRHRGGPMFYASTVGLPTILEKLQKYYRQNPDIPQLEPSDYLKKLAS 703
Query: 703 KG 704
G
Sbjct: 704 HG 705
>gi|427814623|ref|ZP_18981687.1| Putative enoyl-CoA isomerase [Bordetella bronchiseptica 1289]
gi|410565623|emb|CCN23181.1| Putative enoyl-CoA isomerase [Bordetella bronchiseptica 1289]
Length = 694
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 231/697 (33%), Positives = 354/697 (50%), Gaps = 31/697 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSGGFDINVFQKV 73
+ ++TL +PPVNAL + GL E+A +R DV+A++L + G FS G DI F +
Sbjct: 11 IGVVTLDSPPVNALGRTLRHGLAQCLEQAYARPDVRALLLVSARPGIFSAGADIKEFDQA 70
Query: 74 HGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGL 133
D L EL+ + IE+ P+VA ++G ALGG LELA+GCH R+A+P+ LGL
Sbjct: 71 GSDQDAGL-----AELI-DRIENAPVPVVALLDGAALGGALELALGCHYRLASPRASLGL 124
Query: 134 PELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVS 190
PE+ LG++PG TQRLPRLVG A+EM+L + + E + L DA++++++ L+ +
Sbjct: 125 PEIKLGLLPGAGGTQRLPRLVGARHAVEMVLGGEPVGGETALRYKLADALLSADDTLEQA 184
Query: 191 RLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 250
W R P + R L +L+ A +A P +
Sbjct: 185 LAWM-----RNAPGGLARRRVASLPALAPASIAEAA---RAAAIRPVGSAAAREAALACL 236
Query: 251 GIVHGGY-SGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 309
G + +G E + F L +R L + FFA+R P D + R + +VA
Sbjct: 237 AAAQGPFDAGRALERESFARLRDGAEARALRYAFFAERPR---PPAGD--MSARRIEQVA 291
Query: 310 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 369
V+G G MG+GI + V+ +V+++ L +G + + L R +LT +A
Sbjct: 292 VVGAGTMGTGIVICLADAGLPVIWHDVDADRLAQGRAQVCQHFERLAARKRLTSRQAEQR 351
Query: 370 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 429
+ + + + D+ IEAV E + +K +F EL++ P IL TNTST+D++ +
Sbjct: 352 VAAVATTGEMAGIAQADLAIEAVFEDMAVKCAVFRELDRVLKPGAILGTNTSTLDVDRIA 411
Query: 430 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 489
T ++G HFFSPA VMPLLEIVR T A V+ + + ++K VV G C GF
Sbjct: 412 HSTRRPQDVVGLHFFSPAPVMPLLEIVRGAATHADVVAAAQGLARRLRKTAVVAGVCDGF 471
Query: 490 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDK 549
NR + Y + A L+V G +D+A+R +G +GPFQ+ DLAG V +
Sbjct: 472 IGNRMWHQYLRQAALMVHEGAMPMEVDAALRDWGFAMGPFQVADLAGLDVGDSIRLRQRS 531
Query: 550 AFPDRSFQSPLVDLLLKSGRNGKANGKGLYTY-EKGSKPKPDPSVLPIIEECRRLSNIMP 608
P R + L D + +GR G G G++ Y + G +P+ D V +I R + +
Sbjct: 532 EMPHRPWPDWL-DRVSAAGRLGLKGGSGIHGYPDGGRQPRRDAEVEAMIAAASREAGV-- 588
Query: 609 GGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWA 668
++ EIVE L +V E+ R+LEEGI A+D+D + G FP +RGG A
Sbjct: 589 --SRRAIAADEIVERCLHALVVEAARLLEEGIAASATDVDAVFLAGYGFPRWRGGPCHSA 646
Query: 669 DAVGANYVYTSLKKWSQLYG-NFFKPSRFLEERATKG 704
DA+G V L++ + F++P L A +G
Sbjct: 647 DAMGLPAVVAGLRRRAATAEPEFWQPPGLLARLAAQG 683
>gi|157155802|ref|YP_001463687.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli E24377A]
gi|417640098|ref|ZP_12290239.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TX1999]
gi|419171021|ref|ZP_13714907.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC7A]
gi|419181659|ref|ZP_13725272.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC7C]
gi|419187103|ref|ZP_13730617.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC7D]
gi|420386409|ref|ZP_14885759.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EPECa12]
gi|433130908|ref|ZP_20316343.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE163]
gi|433135570|ref|ZP_20320914.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE166]
gi|166972668|sp|A7ZPF8.1|FADJ_ECO24 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|157077832|gb|ABV17540.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
E24377A]
gi|345393100|gb|EGX22878.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TX1999]
gi|378015065|gb|EHV77962.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC7A]
gi|378023292|gb|EHV85969.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC7C]
gi|378029095|gb|EHV91711.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC7D]
gi|391305119|gb|EIQ62914.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EPECa12]
gi|431645705|gb|ELJ13249.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE163]
gi|431656248|gb|ELJ23269.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE166]
Length = 714
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 232/715 (32%), Positives = 365/715 (51%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R ++E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCVDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>gi|420381297|ref|ZP_14880748.1| fatty oxidation complex, alpha subunit FadJ [Shigella dysenteriae
225-75]
gi|391300387|gb|EIQ58308.1| fatty oxidation complex, alpha subunit FadJ [Shigella dysenteriae
225-75]
Length = 714
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 232/715 (32%), Positives = 366/715 (51%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAIITIDVPDEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCASHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTKGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R ++E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCVDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>gi|254486938|ref|ZP_05100143.1| peroxisomal bifunctional enzyme [Roseobacter sp. GAI101]
gi|214043807|gb|EEB84445.1| peroxisomal bifunctional enzyme [Roseobacter sp. GAI101]
Length = 698
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 243/710 (34%), Positives = 369/710 (51%), Gaps = 56/710 (7%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A++ L NPPVNAL+ + GL E A + VKA+++ G G F G DI F K
Sbjct: 13 IAVLRLQNPPVNALSHAVRLGLVAGIERAEADTGVKAVLIVGEGRSFIAGADITEFGKTP 72
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
+PDV IE +VA++ G++LGGGLE+A+ H R+A P +GLP
Sbjct: 73 LE---PYLPDV-----CKRIEASPLLVVASMHGVSLGGGLEIALSAHYRVAQPSAIVGLP 124
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 191
E+ LG+IPG TQRLPRL+G+ A++++ + + + E LG+ID V + +V
Sbjct: 125 EVHLGLIPGAGATQRLPRLIGVDAALDLITSGRQVKAPEALTLGIIDKVAEGDPQ-EVGL 183
Query: 192 LWA---LDIAARRKP-----------WIRSLHRTDKLGSLSEAREVLKLAR-LQAKKTAP 236
+A LD AA R+ W + G+L + R + A ++A + A
Sbjct: 184 AYAQELLDAAAPRRAVSEMAAPAAIDWDAAYD-----GTLKKGRGQISPAHAVRAVQAAS 238
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
+P Q G+ E K+F +L+ D G++H FF++RA +P +
Sbjct: 239 ELPFDQ----------------GMAAERKIFTDLMETDQREGMIHAFFSERAVGNLPELK 282
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
G++PR ++ + +IGGG MG+GIATA +L VVL E+ E I N+ G +
Sbjct: 283 --GVQPRALQSIGIIGGGTMGAGIATAALLAGFNVVLIEMKPEAAEAARARIAGNLSGAL 340
Query: 357 TRGKLTQDKANNALKM-LKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCI 415
RGK+TQ K + + L+ ++Y VD+VIEAV E + +K+ +F +L+ C P I
Sbjct: 341 KRGKITQMKFDAMTTVALEVSVNYESLALVDLVIEAVFEDMDVKKDVFGKLDAVCRPGAI 400
Query: 416 LATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKI 475
LA+NTS +D+N + TS +IG HFFSPAH+M LLE+V ++T+ V+ +GK
Sbjct: 401 LASNTSYLDINEIAASTSRPADVIGLHFFSPAHIMKLLEVVVADKTAPDVVATGFALGKA 460
Query: 476 IKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLA 535
+ K+ V G C GF NR Y +A +V G ++ID A+ FG +GPF + DLA
Sbjct: 461 LGKISVRAGVCDGFIGNRILATYRTAADHMVLDGASPYQIDKALVDFGFAMGPFAVGDLA 520
Query: 536 GYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVL 594
G + AT K D + + G G+ GKG Y YE GS+ P+P V
Sbjct: 521 GLDIGWATRKRKAATRHPAERVPTYPDKICEGGNFGQKTGKGYYVYEAGSRGGVPNPEVP 580
Query: 595 PIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLG 654
+IE R+ I P T+ EIV + +VNE+ R+L EGI R D+D + G
Sbjct: 581 VLIEAERKELGITPR----DFTDAEIVRRYMAAMVNEAARLLGEGIAKRPLDIDMVLLFG 636
Query: 655 MSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
FP Y GG + WAD G + ++ +++ F++P+ L++ +G
Sbjct: 637 YGFPRYWGGPMKWADLQGLPELLADIETYAKDDAWFWEPAPLLKQLVAEG 686
>gi|410420157|ref|YP_006900606.1| enoyl-CoA isomerase [Bordetella bronchiseptica MO149]
gi|408447452|emb|CCJ59126.1| Putative enoyl-CoA isomerase [Bordetella bronchiseptica MO149]
Length = 694
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 226/697 (32%), Positives = 350/697 (50%), Gaps = 31/697 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSGGFDINVFQKV 73
+ ++TL +PPVNAL + GL E+A +R DV+A++L + G FS G DI F +
Sbjct: 11 IGVVTLDSPPVNALGRTLRHGLAQCLEQACARPDVRALLLVSARPGIFSAGADIKEFDQA 70
Query: 74 HGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGL 133
D L EL+ + IE+ P+VA ++G ALGG LELA+GCH R+ +P+ LGL
Sbjct: 71 GSDQDAGL-----AELI-DRIENAPLPVVALLDGAALGGALELALGCHYRLVSPRASLGL 124
Query: 134 PELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVS 190
PE+ LG++PG TQRLPRLVG A+EM+L + + E + L DA++++++ L+ +
Sbjct: 125 PEIKLGLLPGAGGTQRLPRLVGARHAVEMVLGGEPVGGETALRYKLADALLSADDTLEQA 184
Query: 191 RLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 250
W R P + R L +L+ A P +
Sbjct: 185 LAWM-----RNAPGGLAPRRVASLPALAPASIAEAAR---EAAIRPVGSAAAREAALACL 236
Query: 251 GIVHGGY-SGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 309
G + +G E + F L +R L + FFA+R + + R + +VA
Sbjct: 237 AAAQGPFDAGRALERESFARLRDGAEARALRYAFFAERPRPPAGDAS-----ARRIEQVA 291
Query: 310 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 369
V+G G MG+GI + V+ +V+++ L +G + + L R +LT +A
Sbjct: 292 VVGAGTMGTGIVICLADAGLPVIWHDVDADRLAQGRAQVRQHFERLAARQRLTPGQAEQR 351
Query: 370 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 429
+ + + + D+ IEAV E + +K +F EL++ P IL TNTST+D++ +
Sbjct: 352 VAAVATTGEMAGIAQADLAIEAVFEDMAVKCAVFRELDRVLKPGAILGTNTSTLDVDRIA 411
Query: 430 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 489
T ++G HFFSPA VMPLLE+VR T A V+ + + ++K VV G C GF
Sbjct: 412 HSTRRPQDVVGLHFFSPAPVMPLLEVVRGAATHADVVAAAQGLARRLRKTAVVAGVCDGF 471
Query: 490 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDK 549
NR + Y + A L+V G +D+A+R +G +GPFQ+ DLAG V +
Sbjct: 472 IGNRMWHQYLRQAALMVHEGAMPMEVDAALRDWGFAMGPFQVADLAGLDVGDSIRLRQRS 531
Query: 550 AFPDRSFQSPLVDLLLKSGRNGKANGKGLYTY-EKGSKPKPDPSVLPIIEECRRLSNIMP 608
P R + L D + +GR G G G++ Y + G +P+ D V +I R + +
Sbjct: 532 EMPHRPWPDWL-DRVSAAGRLGLKGGSGIHAYPDGGRQPRRDAEVEAMIAAASREAGV-- 588
Query: 609 GGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWA 668
++ EIVE L +V E+ R+LEEGI A+D+D + G FP +RGG A
Sbjct: 589 --SRRAIAADEIVERCLHALVVEAARLLEEGIAASATDVDAVFLAGYGFPRWRGGPCHSA 646
Query: 669 DAVGANYVYTSLKKWSQLYG-NFFKPSRFLEERATKG 704
DA+G V L++ + F++P L A +G
Sbjct: 647 DAMGLPAVVAGLRRRAATAEPEFWQPPGLLARLAAQG 683
>gi|343513259|ref|ZP_08750368.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
scophthalmi LMG 19158]
gi|342793564|gb|EGU29356.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
scophthalmi LMG 19158]
Length = 704
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 226/718 (31%), Positives = 374/718 (52%), Gaps = 30/718 (4%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEE-ATSRDDVKAIVL-TGNG 58
+ A +T++ N I + N +N L ++ F E + +K +++ +G
Sbjct: 4 LKAFNLTIDEQNIAWLCIDVPNEKMNTLQAAFADEMESVFAELEQHKSALKGLIIHSGKP 63
Query: 59 GRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAM 118
F G D+ + A + + E+ L P+VAA+ G LGGGLELA+
Sbjct: 64 DNFVAGADVRMLDACQSAQEAQALATKGQEMFEKL-SKLSFPVVAAIHGPCLGGGLELAL 122
Query: 119 GCHARIAAP--KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWK 173
C R+ + KT+LGLPE+ LG++PG TQRLPRL+GL +++++L K + +++ K
Sbjct: 123 ACDYRVCSDDDKTRLGLPEVQLGLLPGSGGTQRLPRLIGLLPSLDLILTGKQLRAKKAKK 182
Query: 174 LGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVL--KLARLQA 231
LG++DA V LL+V++ + D + K + + + R+V+ + A+
Sbjct: 183 LGVVDACVAPTILLEVAKQFVED---KDKAKHKVSTKEKLMAQTGFGRKVIFEQAAKKTQ 239
Query: 232 KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 291
+KT N P +A L+VI G+ HG G+ EA+ F ELVM + S+ L +FFA T++
Sbjct: 240 QKTRGNYPATEAILEVIRYGLEHGFTKGLAYEAERFGELVMSNESKALRSIFFA---TTE 296
Query: 292 VPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEA 350
+ +P V+++AV+GGGLMG+GI+ + + V +K+V+++ +L +
Sbjct: 297 MKKEHGSDAEPSSVKRIAVLGGGLMGAGISHVTVAKAKVPVRIKDVSNDGVLNALNYNFK 356
Query: 351 NVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKAC 410
R L++ + + ++ L G +D+ F D+VIEAV E + LKQ++ +++E+
Sbjct: 357 LFEKQRKRRILSKAQLQSKMQQLSGGIDFISFNHTDVVIEAVFEDLALKQQMVADIEQNA 416
Query: 411 PPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLM 470
P I ATNTS++ ++ + E+ + + +IG H+FSP MPL+E++ + TS Q I ++
Sbjct: 417 KPDTIFATNTSSLPIHQIAEQAARPENVIGLHYFSPVEKMPLVEVIPHQTTSDQTISTVV 476
Query: 471 TVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 530
+ + K P+VV +C GF VNR PY A ++ G + ++D A+ G P+GP
Sbjct: 477 ELARKQGKTPIVVKDCAGFYVNRILAPYMNEAAHILLTGEPIEQLDGALLDAGFPVGPIT 536
Query: 531 LLDLAGYGVAAATSKEFDKAFPDRSFQSPLV-DLLLKSGRNGKANGKGLYTYEKGSKPKP 589
LLD G + A R FQ P V D LL GR G+ +GKG YTY KG +
Sbjct: 537 LLDEVGVDIGAKIMPILVNELGPR-FQGPAVFDTLLNDGRKGRKSGKGFYTY-KGKDKQV 594
Query: 590 DPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
D SV +L N+ P K + +E+ L P++NE+ R L+EGI+ D D
Sbjct: 595 DKSVY-------KLLNLTPESK---MASQEMAMRCLLPMLNEAVRCLDEGIIRSPRDGDI 644
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPL 707
++ G+ FP + GG + D +G + + + + YG F P L RA+ P
Sbjct: 645 GAIFGIGFPPFLGGPFRYMDQIGIVKLVEIMNEHAAKYGERFAPCDGLLTRASLNAPF 702
>gi|366160263|ref|ZP_09460125.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia sp. TW09308]
Length = 714
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 231/715 (32%), Positives = 369/715 (51%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAVITIDVPGERMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPVPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
I PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 ICTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + + R+L +++ G L A + +KT
Sbjct: 187 DVVPHSILLEA----AVELAKQERTVSRTLPIRERVMAGPLGRALLFKMAGKKTEQKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+VIE G+ G SG EA+ F EL M S+ L ++FFA K P +
Sbjct: 243 NYPATERILEVIETGLAQGSSSGYDAEARAFGELAMTSQSQALRNIFFASTDVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D+ P + G G TA + V +K++N++ + +K + G V
Sbjct: 302 DVAPAPLNSVGILGGGLMGGGIAYVTAG-KAGLPVRIKDINAQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R + + + L ++ G +DY F D++IEAV E++ LKQ++ +E+E+ C PH I
Sbjct: 361 RRRHIKASERDKQLVLISGSMDYHGFSHRDLIIEAVFENLELKQQMVAEVEQNCAPHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ ++ + S ++IG HFFSP MPL+EI+ TSAQ + + + K
Sbjct: 421 ASNTSSLPISDIAAHASRPGQVIGLHFFSPVEKMPLVEIIPHAGTSAQTLATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVQDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ + +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEATYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYRQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R L+E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCLDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E + G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLAVQYGSRFTPCERLLEMSEHG 702
>gi|410616276|ref|ZP_11327268.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola polaris LMG 21857]
gi|410163985|dbj|GAC31406.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola polaris LMG 21857]
Length = 716
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 243/716 (33%), Positives = 372/716 (51%), Gaps = 34/716 (4%)
Query: 2 AAPRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNG 58
A T+ DG+AI+++ P +N L + + D ++ S +D+K +V+ +G
Sbjct: 11 AQSAFTLTKREDGIAILSMDVPGETMNTLKVEFGDQVNDMLDQIQSDNDIKGVVIISGKD 70
Query: 59 GRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAM 118
F G DI++ A D + + V IED P VAA+ G ALGGGLELA+
Sbjct: 71 NSFVAGADISMLASCQSAVDAEAIGKGG-QAVFQRIEDMSIPFVAAIHGPALGGGLELAL 129
Query: 119 GCHARIAAP--KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWK 173
CHAR+ + KTQLGLPE+ LG++PG TQRLPRL+ + +A++MML S+ +++ K
Sbjct: 130 ACHARVCSDDNKTQLGLPEVQLGLLPGSGGTQRLPRLISVQQAMKMMLTGVSVRAKQAKK 189
Query: 174 LGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEA-----REVLKLAR 228
G++D +V LL V A+++A + KP R + D +G+ E + + K AR
Sbjct: 190 YGIVDDMVPRSILLDV----AIEMAKKPKPT-RKPVKLDVMGTFLERTPMGRKLMFKQAR 244
Query: 229 LQAK-KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQR 287
Q + KT N P + +D IE G+ G G+ EAK F LVM S L +FFA
Sbjct: 245 KQTQAKTLGNYPSPERIIDCIETGLEKGIQQGMALEAKHFGHLVMTPESAALRSLFFATT 304
Query: 288 ATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIK 346
K + G+ P+ ++K+ V+GGGLMG GIA N+ +K++ S+ + ++
Sbjct: 305 EMKKEHGIE--GVAPKKLKKIGVLGGGLMGGGIAFVTATKANLPARIKDIRSDGIAHAMQ 362
Query: 347 TIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSEL 406
+ V R + L L G +DY F + D+VIEAV E + LKQ + +++
Sbjct: 363 YSYDILNKKVKRRFMLHSDMQKQLSRLTGAIDYVGFDNTDVVIEAVFEDLGLKQNMVADV 422
Query: 407 EKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVI 466
E+ C H I A+NTS+I + + + +IG H+FSP MPL E++ E TS + I
Sbjct: 423 EEHCAQHTIFASNTSSIPIAQIAANAQRPENVIGLHYFSPVDKMPLAEVIAHEGTSDETI 482
Query: 467 LDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPY-SQSARLLVSLGVDVFRIDSAIRSFGLP 525
+ + K K P+VV + GF VNR PY ++SA +L+S G + +ID A+ FG P
Sbjct: 483 STTVELAKKQGKTPIVVKDGAGFYVNRILAPYMNESAEILLS-GEPIDQIDKALVKFGFP 541
Query: 526 IGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGS 585
+GP +LLD G V S F +R +P D LL R GK N +G Y YE G
Sbjct: 542 VGPIKLLDEVGIDVGTKISPILVAQFGERFNSAPGFDKLLADDRKGKKNKRGFYNYE-GK 600
Query: 586 KPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRAS 645
KP D + E L + P + +++ I E + ++NE+ L+EG+V A
Sbjct: 601 KPGKD-----VDESVYDLLGVTPNSR---LSDNTIAERCVLLMLNEAAMCLDEGVVRCAR 652
Query: 646 DLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERA 701
D D ++ G+ FP + GG + D +G ++ L + Q G+ F P+ L + A
Sbjct: 653 DGDIGAIFGIGFPPFLGGPFRYMDTLGIKHIVERLTYYQQQLGDKFSPATCLTDMA 708
>gi|432481707|ref|ZP_19723664.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE210]
gi|431007079|gb|ELD22048.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE210]
Length = 714
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 232/715 (32%), Positives = 366/715 (51%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAIITIDVPDEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R ++E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCVDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>gi|432441834|ref|ZP_19684174.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE189]
gi|432446950|ref|ZP_19689249.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE191]
gi|433014604|ref|ZP_20202951.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE104]
gi|433024223|ref|ZP_20212210.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE106]
gi|433323812|ref|ZP_20401143.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli J96]
gi|430966288|gb|ELC83696.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE189]
gi|430973223|gb|ELC90191.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE191]
gi|431530335|gb|ELI07016.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE104]
gi|431535295|gb|ELI11676.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE106]
gi|432347910|gb|ELL42367.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli J96]
Length = 714
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 231/715 (32%), Positives = 367/715 (51%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + ++ +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEVLARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQAVKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L ++FFA K P +
Sbjct: 243 NYPTTERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASTEVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPRGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCATHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K+P+VV + GF VNR PY A +++ G + ID+A+ FG P+GP QLLD G
Sbjct: 481 GKMPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIMPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R L+E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCLDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E + +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCDRLVEMSERG 702
>gi|415828918|ref|ZP_11515350.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
OK1357]
gi|323184339|gb|EFZ69715.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
OK1357]
Length = 712
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 232/715 (32%), Positives = 366/715 (51%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 6 TLNVRLDNIAIITIDVPDEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 65
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 66 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 124
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 125 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 184
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 185 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 240
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 241 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 299
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 300 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 358
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 359 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 418
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 419 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 478
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 479 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 538
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 539 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 597
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R ++E ++ D D
Sbjct: 598 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCVDEQVIRSVRDGDI 645
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 646 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 700
>gi|419914600|ref|ZP_14432993.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli KD1]
gi|388386129|gb|EIL47786.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli KD1]
Length = 714
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 229/714 (32%), Positives = 367/714 (51%), Gaps = 35/714 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + ++ +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEVLARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQAVKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L ++FFA K P +
Sbjct: 243 NYPTTERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASTEVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPRGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCATHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G + ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPIIEECRRLSNIMPGGKPIS-VTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDA 650
++ P+I G + + ++ ++ E + ++NE+ R L+E ++ D D
Sbjct: 600 AIYPLI-----------GAQGLGRLSAPQVAERCVMLMLNEAVRCLDEQVIRSVRDGDIG 648
Query: 651 SVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E + +G
Sbjct: 649 AVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCDRLVEMSERG 702
>gi|425306070|ref|ZP_18695777.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli N1]
gi|408228064|gb|EKI51614.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli N1]
Length = 714
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 233/715 (32%), Positives = 364/715 (50%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA I V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + ++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPGQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++VE + ++NE+ R +EE ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVVERCVMLMLNEAVRCVEEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>gi|418041755|ref|ZP_12679970.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli W26]
gi|383475326|gb|EID67290.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli W26]
Length = 714
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 232/715 (32%), Positives = 365/715 (51%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPDEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R ++E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCVDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>gi|215487553|ref|YP_002329984.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O127:H6 str. E2348/69]
gi|312967642|ref|ZP_07781857.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
2362-75]
gi|417756602|ref|ZP_12404677.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC2B]
gi|418997531|ref|ZP_13545125.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC1A]
gi|419002892|ref|ZP_13550419.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC1B]
gi|419008585|ref|ZP_13556016.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC1C]
gi|419014269|ref|ZP_13561619.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC1D]
gi|419019267|ref|ZP_13566574.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC1E]
gi|419024770|ref|ZP_13571996.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC2A]
gi|419029809|ref|ZP_13576972.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC2C]
gi|419035504|ref|ZP_13582590.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC2D]
gi|419040497|ref|ZP_13587525.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC2E]
gi|254788663|sp|B7UFZ8.1|FADJ_ECO27 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|215265625|emb|CAS10028.1| fused enoyl-CoA hydratase and epimerase
andisomerase/3-hydroxyacyl-CoA dehydrogenase
[Escherichia coli O127:H6 str. E2348/69]
gi|312287839|gb|EFR15744.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
2362-75]
gi|377843358|gb|EHU08398.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC1A]
gi|377844103|gb|EHU09140.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC1C]
gi|377847771|gb|EHU12769.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC1B]
gi|377857122|gb|EHU21977.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC1D]
gi|377860321|gb|EHU25147.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC1E]
gi|377863554|gb|EHU28359.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC2A]
gi|377874018|gb|EHU38649.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC2B]
gi|377877991|gb|EHU42580.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC2C]
gi|377879860|gb|EHU44432.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC2D]
gi|377890537|gb|EHU54994.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC2E]
Length = 714
Score = 343 bits (879), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 231/715 (32%), Positives = 366/715 (51%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQIRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + ++ +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEVLARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQAVKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L ++FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASSEVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPRGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCATHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G + ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIMPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R L+E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCLDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E + +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCDRLVEMSERG 702
>gi|417690473|ref|ZP_12339695.1| fatty oxidation complex, alpha subunit FadJ [Shigella boydii
5216-82]
gi|332088475|gb|EGI93593.1| fatty oxidation complex, alpha subunit FadJ [Shigella boydii
5216-82]
Length = 714
Score = 343 bits (879), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 232/715 (32%), Positives = 366/715 (51%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAIITIDVPDEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R ++E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCVDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>gi|209919841|ref|YP_002293925.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli SE11]
gi|419370841|ref|ZP_13911960.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC14A]
gi|422355201|ref|ZP_16435920.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
117-3]
gi|254788654|sp|B6I6Q4.1|FADJ_ECOSE RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|209913100|dbj|BAG78174.1| conserved hypothetical protein [Escherichia coli SE11]
gi|324016851|gb|EGB86070.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
117-3]
gi|378217435|gb|EHX77714.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC14A]
Length = 714
Score = 343 bits (879), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 232/715 (32%), Positives = 365/715 (51%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R ++E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCVDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>gi|424135291|ref|ZP_17867776.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA10]
gi|390696619|gb|EIN71067.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA10]
Length = 714
Score = 343 bits (879), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 232/715 (32%), Positives = 364/715 (50%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA I V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVAHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R ++E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCVDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 648 GAVFGICFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>gi|168748199|ref|ZP_02773221.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
O157:H7 str. EC4113]
gi|168755101|ref|ZP_02780108.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
O157:H7 str. EC4401]
gi|168767975|ref|ZP_02792982.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
O157:H7 str. EC4486]
gi|168772924|ref|ZP_02797931.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
O157:H7 str. EC4196]
gi|168780206|ref|ZP_02805213.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
O157:H7 str. EC4076]
gi|168787254|ref|ZP_02812261.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
O157:H7 str. EC869]
gi|168798519|ref|ZP_02823526.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
O157:H7 str. EC508]
gi|195935722|ref|ZP_03081104.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O157:H7 str. EC4024]
gi|208808657|ref|ZP_03250994.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
O157:H7 str. EC4206]
gi|208814182|ref|ZP_03255511.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
O157:H7 str. EC4045]
gi|208820502|ref|ZP_03260822.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
O157:H7 str. EC4042]
gi|209400826|ref|YP_002271753.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O157:H7 str. EC4115]
gi|254794233|ref|YP_003079070.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O157:H7 str. TW14359]
gi|261223205|ref|ZP_05937486.1| fused enoyl-CoA hydratase and epimerase and isomerase,
3-hydroxyacyl-CoA dehydrogenase [Escherichia coli
O157:H7 str. FRIK2000]
gi|261259244|ref|ZP_05951777.1| fused enoyl-CoA hydratase and epimerase and isomerase,
3-hydroxyacyl-CoA dehydrogenase [Escherichia coli
O157:H7 str. FRIK966]
gi|416775623|ref|ZP_11874463.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O157:H7 str. G5101]
gi|416787301|ref|ZP_11879372.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O157:H- str. 493-89]
gi|416798940|ref|ZP_11884289.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O157:H- str. H 2687]
gi|416809310|ref|ZP_11888973.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O55:H7 str. 3256-97]
gi|416830816|ref|ZP_11898821.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O157:H7 str. LSU-61]
gi|419070459|ref|ZP_13616082.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC3E]
gi|419076420|ref|ZP_13621938.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC3F]
gi|419081544|ref|ZP_13626992.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC4A]
gi|419087325|ref|ZP_13632682.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC4B]
gi|419093345|ref|ZP_13638630.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC4C]
gi|419099023|ref|ZP_13644222.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC4D]
gi|419104917|ref|ZP_13650046.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC4E]
gi|419121309|ref|ZP_13666265.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC5B]
gi|420270734|ref|ZP_14773092.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA22]
gi|420276357|ref|ZP_14778641.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA40]
gi|420281267|ref|ZP_14783505.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TW06591]
gi|420287475|ref|ZP_14789666.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TW10246]
gi|420299173|ref|ZP_14801222.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TW09109]
gi|420304998|ref|ZP_14806994.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TW10119]
gi|420310593|ref|ZP_14812526.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1738]
gi|420315843|ref|ZP_14817719.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1734]
gi|421813312|ref|ZP_16249034.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
8.0416]
gi|421824978|ref|ZP_16260345.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
FRIK920]
gi|424084857|ref|ZP_17821360.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
FDA517]
gi|424091314|ref|ZP_17827259.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
FRIK1996]
gi|424097900|ref|ZP_17833232.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
FRIK1985]
gi|424116686|ref|ZP_17850547.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA3]
gi|424129042|ref|ZP_17861963.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA9]
gi|424154203|ref|ZP_17885174.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA24]
gi|424248025|ref|ZP_17890657.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA25]
gi|424325583|ref|ZP_17896579.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA28]
gi|424463177|ref|ZP_17913646.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA39]
gi|424481823|ref|ZP_17930819.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TW07945]
gi|424487972|ref|ZP_17936556.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TW09098]
gi|424494571|ref|ZP_17942332.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TW09195]
gi|424501341|ref|ZP_17948262.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC4203]
gi|424507575|ref|ZP_17954001.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC4196]
gi|424514904|ref|ZP_17959611.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TW14313]
gi|424521217|ref|ZP_17965358.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TW14301]
gi|424539280|ref|ZP_17982246.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC4013]
gi|424545307|ref|ZP_17987749.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC4402]
gi|424551555|ref|ZP_17993437.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC4439]
gi|424557742|ref|ZP_17999175.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC4436]
gi|424564089|ref|ZP_18005106.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC4437]
gi|424570212|ref|ZP_18010793.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC4448]
gi|424576376|ref|ZP_18016475.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1845]
gi|424582221|ref|ZP_18021886.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1863]
gi|425105064|ref|ZP_18507393.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
5.2239]
gi|425132688|ref|ZP_18533549.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
8.2524]
gi|425139154|ref|ZP_18539557.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
10.0833]
gi|425145012|ref|ZP_18545021.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
10.0869]
gi|425156944|ref|ZP_18556222.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA34]
gi|425181207|ref|ZP_18578913.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
FRIK1999]
gi|425194242|ref|ZP_18591025.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
NE1487]
gi|425200681|ref|ZP_18596909.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
NE037]
gi|425207099|ref|ZP_18602911.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
FRIK2001]
gi|425243932|ref|ZP_18637252.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MA6]
gi|425255919|ref|ZP_18648451.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
CB7326]
gi|425262134|ref|ZP_18654163.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC96038]
gi|425268171|ref|ZP_18659815.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli 5412]
gi|425295611|ref|ZP_18685827.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA38]
gi|425312276|ref|ZP_18701474.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1735]
gi|425318227|ref|ZP_18707032.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1736]
gi|425330609|ref|ZP_18718494.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1846]
gi|425336773|ref|ZP_18724176.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1847]
gi|425343181|ref|ZP_18730096.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1848]
gi|425348978|ref|ZP_18735474.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1849]
gi|425355276|ref|ZP_18741364.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1850]
gi|425361236|ref|ZP_18746907.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1856]
gi|425367411|ref|ZP_18752603.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1862]
gi|425373781|ref|ZP_18758444.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1864]
gi|425386631|ref|ZP_18770208.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1866]
gi|425393353|ref|ZP_18776480.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1868]
gi|425399449|ref|ZP_18782176.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1869]
gi|425405531|ref|ZP_18787784.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1870]
gi|428966568|ref|ZP_19037345.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
90.0091]
gi|428972320|ref|ZP_19042682.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
90.0039]
gi|429033614|ref|ZP_19099156.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
96.0939]
gi|429039717|ref|ZP_19104847.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
96.0932]
gi|429056364|ref|ZP_19120703.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
97.1742]
gi|429068204|ref|ZP_19131685.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
99.0672]
gi|429074102|ref|ZP_19137365.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
99.0678]
gi|444925886|ref|ZP_21245201.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
09BKT078844]
gi|444931601|ref|ZP_21250653.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
99.0814]
gi|444937007|ref|ZP_21255797.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
99.0815]
gi|444942633|ref|ZP_21261164.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
99.0816]
gi|444948194|ref|ZP_21266513.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
99.0839]
gi|444970329|ref|ZP_21287702.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
99.1793]
gi|444975583|ref|ZP_21292725.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
99.1805]
gi|444981049|ref|ZP_21297967.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli ATCC
700728]
gi|444991701|ref|ZP_21308356.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA19]
gi|444997016|ref|ZP_21313524.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA13]
gi|445002569|ref|ZP_21318967.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA2]
gi|445008072|ref|ZP_21324321.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA47]
gi|445013097|ref|ZP_21329215.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA48]
gi|445018979|ref|ZP_21334952.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA8]
gi|445024483|ref|ZP_21340316.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
7.1982]
gi|445035221|ref|ZP_21350761.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
99.1762]
gi|445040848|ref|ZP_21356234.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA35]
gi|445046040|ref|ZP_21361302.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
3.4880]
gi|452970986|ref|ZP_21969213.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O157:H7 str. EC4009]
gi|254788660|sp|B5YXY4.1|FADJ_ECO5E RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|187771297|gb|EDU35141.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
O157:H7 str. EC4196]
gi|188017231|gb|EDU55353.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
O157:H7 str. EC4113]
gi|189002100|gb|EDU71086.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
O157:H7 str. EC4076]
gi|189357657|gb|EDU76076.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
O157:H7 str. EC4401]
gi|189363024|gb|EDU81443.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
O157:H7 str. EC4486]
gi|189372935|gb|EDU91351.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
O157:H7 str. EC869]
gi|189379042|gb|EDU97458.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
O157:H7 str. EC508]
gi|208728458|gb|EDZ78059.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
O157:H7 str. EC4206]
gi|208735459|gb|EDZ84146.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
O157:H7 str. EC4045]
gi|208740625|gb|EDZ88307.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
O157:H7 str. EC4042]
gi|209162226|gb|ACI39659.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
O157:H7 str. EC4115]
gi|209764648|gb|ACI80636.1| putative enzyme [Escherichia coli]
gi|209764652|gb|ACI80638.1| putative enzyme [Escherichia coli]
gi|209764656|gb|ACI80640.1| putative enzyme [Escherichia coli]
gi|254593633|gb|ACT72994.1| fused enoyl-CoA hydratase and epimerase and isomerase,
3-hydroxyacyl-CoA dehydrogenase [Escherichia coli
O157:H7 str. TW14359]
gi|320641168|gb|EFX10647.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O157:H7 str. G5101]
gi|320646384|gb|EFX15307.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O157:H- str. 493-89]
gi|320651654|gb|EFX20034.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O157:H- str. H 2687]
gi|320657405|gb|EFX25207.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O55:H7 str. 3256-97 TW 07815]
gi|320667685|gb|EFX34596.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O157:H7 str. LSU-61]
gi|377912289|gb|EHU76452.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC3E]
gi|377921461|gb|EHU85460.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC3F]
gi|377926174|gb|EHU90109.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC4A]
gi|377930515|gb|EHU94398.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC4B]
gi|377941787|gb|EHV05524.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC4C]
gi|377942133|gb|EHV05869.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC4D]
gi|377947400|gb|EHV11067.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC4E]
gi|377966533|gb|EHV29944.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC5B]
gi|390641802|gb|EIN21226.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
FRIK1996]
gi|390642583|gb|EIN21972.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
FDA517]
gi|390662003|gb|EIN39631.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
FRIK1985]
gi|390677609|gb|EIN53627.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA3]
gi|390683582|gb|EIN59250.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA9]
gi|390714246|gb|EIN87160.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA22]
gi|390722914|gb|EIN95546.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA25]
gi|390724209|gb|EIN96777.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA24]
gi|390727679|gb|EIO00080.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA28]
gi|390757767|gb|EIO27237.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA40]
gi|390768844|gb|EIO37832.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA39]
gi|390781554|gb|EIO49231.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TW06591]
gi|390790232|gb|EIO57660.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TW10246]
gi|390790792|gb|EIO58194.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TW07945]
gi|390805932|gb|EIO72855.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TW09098]
gi|390806868|gb|EIO73770.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TW09109]
gi|390816020|gb|EIO82532.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TW10119]
gi|390826032|gb|EIO91902.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC4203]
gi|390830594|gb|EIO96111.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TW09195]
gi|390831299|gb|EIO96708.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC4196]
gi|390845992|gb|EIP09608.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TW14301]
gi|390846714|gb|EIP10285.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TW14313]
gi|390865611|gb|EIP27614.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC4013]
gi|390870809|gb|EIP32278.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC4402]
gi|390878696|gb|EIP39518.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC4439]
gi|390883653|gb|EIP44066.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC4436]
gi|390893550|gb|EIP53095.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC4437]
gi|390895930|gb|EIP55336.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC4448]
gi|390899872|gb|EIP59108.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1738]
gi|390907833|gb|EIP66674.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1734]
gi|390919156|gb|EIP77514.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1863]
gi|390920279|gb|EIP78560.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1845]
gi|408068030|gb|EKH02458.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
FRIK920]
gi|408070461|gb|EKH04820.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA34]
gi|408097232|gb|EKH30131.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
FRIK1999]
gi|408108583|gb|EKH40586.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
NE1487]
gi|408115018|gb|EKH46494.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
NE037]
gi|408121416|gb|EKH52377.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
FRIK2001]
gi|408160211|gb|EKH88255.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MA6]
gi|408173357|gb|EKI00387.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
CB7326]
gi|408180415|gb|EKI07027.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC96038]
gi|408182813|gb|EKI09297.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli 5412]
gi|408217470|gb|EKI41720.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA38]
gi|408227353|gb|EKI50949.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1735]
gi|408238414|gb|EKI61216.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1736]
gi|408247071|gb|EKI69298.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1846]
gi|408256199|gb|EKI77588.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1847]
gi|408259145|gb|EKI80341.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1848]
gi|408265519|gb|EKI86209.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1849]
gi|408274698|gb|EKI94686.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1850]
gi|408277131|gb|EKI96945.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1856]
gi|408286830|gb|EKJ05745.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1862]
gi|408291014|gb|EKJ09661.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1864]
gi|408307996|gb|EKJ25282.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1866]
gi|408308036|gb|EKJ25321.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1868]
gi|408319198|gb|EKJ35353.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1869]
gi|408325949|gb|EKJ41792.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1870]
gi|408550210|gb|EKK27555.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
5.2239]
gi|408579416|gb|EKK54877.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
10.0833]
gi|408581105|gb|EKK56460.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
8.2524]
gi|408591733|gb|EKK66154.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
10.0869]
gi|408601136|gb|EKK74952.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
8.0416]
gi|427222096|gb|EKV90895.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
90.0091]
gi|427228062|gb|EKV96546.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
90.0039]
gi|427283576|gb|EKW47784.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
96.0939]
gi|427291890|gb|EKW55263.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
96.0932]
gi|427313055|gb|EKW75189.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
97.1742]
gi|427319462|gb|EKW81274.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
99.0672]
gi|427328447|gb|EKW89814.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
99.0678]
gi|444538241|gb|ELV18119.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
99.0814]
gi|444539785|gb|ELV19494.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
09BKT078844]
gi|444547529|gb|ELV26115.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
99.0815]
gi|444557382|gb|ELV34729.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
99.0839]
gi|444558353|gb|ELV35640.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
99.0816]
gi|444579359|gb|ELV55354.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
99.1793]
gi|444593391|gb|ELV68610.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli ATCC
700728]
gi|444595410|gb|ELV70513.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
99.1805]
gi|444607051|gb|ELV81647.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA13]
gi|444607570|gb|ELV82146.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA19]
gi|444615922|gb|ELV90105.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA2]
gi|444623424|gb|ELV97345.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA47]
gi|444624739|gb|ELV98621.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA48]
gi|444629643|gb|ELW03327.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA8]
gi|444638638|gb|ELW11970.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
7.1982]
gi|444645172|gb|ELW18246.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
99.1762]
gi|444654498|gb|ELW27164.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA35]
gi|444659894|gb|ELW32281.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
3.4880]
Length = 714
Score = 343 bits (879), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 232/715 (32%), Positives = 364/715 (50%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA I V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVAHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R ++E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCVDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>gi|331647998|ref|ZP_08349090.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli M605]
gi|331043722|gb|EGI15860.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli M605]
Length = 720
Score = 343 bits (879), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 231/715 (32%), Positives = 367/715 (51%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + ++ +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEVLARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQAVKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L ++FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASTDVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKFSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCATHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G + ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHIDTALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIMPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R L+E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCLDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E + +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLAMQYGSRFTPCDRLVEMSERG 702
>gi|432358683|ref|ZP_19601908.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE4]
gi|430876925|gb|ELC00391.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE4]
Length = 714
Score = 343 bits (879), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 231/715 (32%), Positives = 366/715 (51%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQIRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + ++ +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEVLARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQAVKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L ++FFA K P +
Sbjct: 243 NYPATERILEVVETGVAQGTSSGYDAEARAFGELAMTPQSQALHNIFFASTDVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPRGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCATHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G + ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIMPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R L+E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCLDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E + +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCDRLVEMSERG 702
>gi|432398215|ref|ZP_19640995.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE25]
gi|432407394|ref|ZP_19650103.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE28]
gi|432723790|ref|ZP_19958710.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE17]
gi|432728377|ref|ZP_19963256.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE18]
gi|432742071|ref|ZP_19976790.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE23]
gi|432895356|ref|ZP_20107076.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE165]
gi|432991378|ref|ZP_20180042.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE217]
gi|433111589|ref|ZP_20297454.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE150]
gi|430915072|gb|ELC36159.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE25]
gi|430930153|gb|ELC50662.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE28]
gi|431266344|gb|ELF57906.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE17]
gi|431274066|gb|ELF65140.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE18]
gi|431283762|gb|ELF74621.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE23]
gi|431421723|gb|ELH03935.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE165]
gi|431495460|gb|ELH75046.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE217]
gi|431628893|gb|ELI97269.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE150]
Length = 714
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 231/718 (32%), Positives = 368/718 (51%), Gaps = 35/718 (4%)
Query: 3 APRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGG 59
A T+ V D +AIIT+ P +N L + ++ ++ +++ +V +
Sbjct: 4 ASAFTLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPD 63
Query: 60 RFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMG 119
F G DIN+ A + ++ +L+ I P++AA+ G LGGGLELA+
Sbjct: 64 NFIAGADINMIGNCKTAQEAEVLARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALA 122
Query: 120 CHARIAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKL 174
CH R+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KL
Sbjct: 123 CHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQAVKL 182
Query: 175 GLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAK 232
GL+D VV LL+ A+++A + +P R L +++ G L A + +
Sbjct: 183 GLVDDVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEH 238
Query: 233 KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 292
KT N P + L+V+E G+ G SG EA+ F EL M S+ L ++FFA K
Sbjct: 239 KTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASTDVKKD 298
Query: 293 PNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANV 352
P +D P + G G TA + V +K++N + + +K +
Sbjct: 299 PG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKFSWDQL 356
Query: 353 RGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPP 412
G V R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C
Sbjct: 357 EGKVRRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCAT 416
Query: 413 HCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTV 472
H I A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + +
Sbjct: 417 HTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKL 476
Query: 473 GKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLL 532
K K+P+VV + GF VNR PY A +++ G + ID+A+ FG P+GP QLL
Sbjct: 477 AKKQGKMPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHIDAALVKFGFPVGPIQLL 536
Query: 533 DLAGYGVAAATSKEFDKAFPDR-SFQSPLVDLLLKSGRNGKANGKGLYTY-EKGSKPKP- 589
D G + A+ +R S + +V +L R G+ NG+G Y Y +KG K K
Sbjct: 537 DEVGIDTGTKIMPVLEAAYGERFSASANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQ 596
Query: 590 -DPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASD 646
DP++ P+I + RLS ++ E + ++NE+ R L+E ++ D
Sbjct: 597 VDPAIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCLDEQVIRSVRD 644
Query: 647 LDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
D +V G+ FP + GG + D++GA V +++ + YG+ F P L E + +G
Sbjct: 645 GDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCDRLVEMSERG 702
>gi|424104093|ref|ZP_17838890.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
FRIK1990]
gi|425151060|ref|ZP_18550691.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
88.0221]
gi|425324330|ref|ZP_18712715.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1737]
gi|428947960|ref|ZP_19020266.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
88.1467]
gi|429002859|ref|ZP_19071020.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
95.0183]
gi|444953699|ref|ZP_21271807.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
99.0848]
gi|390663927|gb|EIN41403.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
FRIK1990]
gi|408242653|gb|EKI65219.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1737]
gi|408596330|gb|EKK70471.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
88.0221]
gi|427208819|gb|EKV78908.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
88.1467]
gi|427261857|gb|EKW27774.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
95.0183]
gi|444563518|gb|ELV40514.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
99.0848]
Length = 712
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 232/715 (32%), Positives = 364/715 (50%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 6 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 65
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 66 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 124
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 125 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 184
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 185 DVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 240
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 241 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 299
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA I V +K++N + + +K + G V
Sbjct: 300 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDINPQGINHALKYSWDQLEGKV 358
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 359 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 418
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 419 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 478
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 479 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVAHIDAALVKFGFPVGPIQLLDEVG 538
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 539 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 597
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R ++E ++ D D
Sbjct: 598 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCVDEQVIRSVRDGDI 645
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 646 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 700
>gi|419192393|ref|ZP_13735846.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC7E]
gi|378038457|gb|EHW00972.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC7E]
Length = 709
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 232/715 (32%), Positives = 365/715 (51%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 3 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 62
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 63 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 121
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 122 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 181
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 182 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 237
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 238 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 296
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 297 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 355
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 356 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 415
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 416 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 475
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 476 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 535
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 536 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 594
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R ++E ++ D D
Sbjct: 595 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCVDEQVIRSVRDGDI 642
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 643 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 697
>gi|424469529|ref|ZP_17919374.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA41]
gi|390767645|gb|EIO36720.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA41]
Length = 712
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 232/715 (32%), Positives = 364/715 (50%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 6 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 65
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 66 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 124
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 125 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 184
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 185 DVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 240
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 241 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 299
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA I V +K++N + + +K + G V
Sbjct: 300 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDINPQGINHALKYSWDQLEGKV 358
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 359 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 418
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 419 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 478
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 479 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVAHIDAALVKFGFPVGPIQLLDEVG 538
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 539 IDTGTKIIPVLEAAYGER-FSAPENVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 597
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R ++E ++ D D
Sbjct: 598 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCVDEQVIRSVRDGDI 645
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 646 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 700
>gi|422974370|ref|ZP_16976280.1| fatty acid oxidation complex subunit alpha [Escherichia coli TA124]
gi|371595749|gb|EHN84596.1| fatty acid oxidation complex subunit alpha [Escherichia coli TA124]
Length = 714
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 229/713 (32%), Positives = 368/713 (51%), Gaps = 33/713 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIANCKTAQEAEALARQGQQLMAE-IHALPVPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ P+T LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPRTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+V A+++A + +P R L +++ G L A +++ KT
Sbjct: 187 DVVPQSILLEV----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVSKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+VIE G+ G SG EA+ F EL M S+ L ++FFA K P +
Sbjct: 243 NYPATERILEVIENGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASTEVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGISHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K +VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTAIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDAS 651
++ P+I G+ ++ ++ E + ++NE+ R L+E ++ D D +
Sbjct: 600 AIYPLI-------GTQGQGR---LSAPQVAERCVMLMLNEAVRCLDEQVIRSVRDGDIGA 649
Query: 652 VLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
V G+ FP + GG + D++GA V +++ + YG+ F P L E + +G
Sbjct: 650 VFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMSKRG 702
>gi|417629608|ref|ZP_12279845.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
STEC_MHI813]
gi|345372355|gb|EGX04319.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
STEC_MHI813]
Length = 714
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 233/715 (32%), Positives = 363/715 (50%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDHPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R L+E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCLDEQVIRSGRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + DA+GA V +++ + YG+ F P L E +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDALGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>gi|432875981|ref|ZP_20094141.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE154]
gi|431420253|gb|ELH02585.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE154]
Length = 714
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 229/713 (32%), Positives = 365/713 (51%), Gaps = 33/713 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAIITIDVPDEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVTEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTQGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDAS 651
++ P+I G+ ++ ++ E + ++NE+ R ++E ++ D D +
Sbjct: 600 AIYPLI-------GTQGQGR---ISAPQVAERCVMLMLNEAVRCVDEQVIRSVRDGDIGA 649
Query: 652 VLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 650 VFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>gi|191165478|ref|ZP_03027319.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli B7A]
gi|260856384|ref|YP_003230275.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O26:H11 str. 11368]
gi|260869062|ref|YP_003235464.1| fused enoyl-CoA hydratase and epimerase and
isomerase/3-hydroxyacyl-CoA dehydrogenase [Escherichia
coli O111:H- str. 11128]
gi|293446676|ref|ZP_06663098.1| fatty oxidation complex [Escherichia coli B088]
gi|309796788|ref|ZP_07691191.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
145-7]
gi|415784193|ref|ZP_11492156.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EPECa14]
gi|415822778|ref|ZP_11511297.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
OK1180]
gi|417154945|ref|ZP_11993074.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
96.0497]
gi|417204521|ref|ZP_12018781.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
JB1-95]
gi|417299961|ref|ZP_12087188.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
900105 (10e)]
gi|417581859|ref|ZP_12232661.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
STEC_B2F1]
gi|417597661|ref|ZP_12248300.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
3030-1]
gi|417667755|ref|ZP_12317300.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
STEC_O31]
gi|419197851|ref|ZP_13741237.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC8A]
gi|419204346|ref|ZP_13747527.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC8B]
gi|419210549|ref|ZP_13753626.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC8C]
gi|419222355|ref|ZP_13765276.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC8E]
gi|419227622|ref|ZP_13770476.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC9A]
gi|419233186|ref|ZP_13775962.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC9B]
gi|419238649|ref|ZP_13781364.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC9C]
gi|419244117|ref|ZP_13786755.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC9D]
gi|419249940|ref|ZP_13792523.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC9E]
gi|419255808|ref|ZP_13798323.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC10A]
gi|419262028|ref|ZP_13804445.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC10B]
gi|419273520|ref|ZP_13815815.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC10D]
gi|419285051|ref|ZP_13827222.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC10F]
gi|419876201|ref|ZP_14397971.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O111:H11 str. CVM9534]
gi|419884579|ref|ZP_14405500.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O111:H11 str. CVM9545]
gi|419889127|ref|ZP_14409557.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O111:H8 str. CVM9570]
gi|419895595|ref|ZP_14415391.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O111:H8 str. CVM9574]
gi|419905137|ref|ZP_14424109.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O26:H11 str. CVM9942]
gi|419909058|ref|ZP_14427693.1| fused enoyl-CoA hydratase and epimerase and
isomerase/3-hydroxyacyl-CoA dehydrogenase [Escherichia
coli O26:H11 str. CVM10026]
gi|420091081|ref|ZP_14602839.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O111:H8 str. CVM9602]
gi|420096119|ref|ZP_14607554.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O111:H8 str. CVM9634]
gi|420102230|ref|ZP_14613255.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O111:H11 str. CVM9455]
gi|420111084|ref|ZP_14620961.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O111:H11 str. CVM9553]
gi|420116680|ref|ZP_14626057.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O26:H11 str. CVM10021]
gi|420122109|ref|ZP_14631119.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O26:H11 str. CVM10030]
gi|420127373|ref|ZP_14636009.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O26:H11 str. CVM10224]
gi|420131852|ref|ZP_14640255.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O26:H11 str. CVM9952]
gi|424753000|ref|ZP_18180965.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O26:H11 str. CFSAN001629]
gi|424761879|ref|ZP_18189408.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O111:H11 str. CFSAN001630]
gi|424774326|ref|ZP_18201341.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O111:H8 str. CFSAN001632]
gi|425380402|ref|ZP_18764440.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1865]
gi|425423154|ref|ZP_18804322.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
0.1288]
gi|190904401|gb|EDV64109.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli B7A]
gi|257755033|dbj|BAI26535.1| fused enoyl-CoA hydratase and epimerase and
isomerase/3-hydroxyacyl-CoA dehydrogenase [Escherichia
coli O26:H11 str. 11368]
gi|257765418|dbj|BAI36913.1| fused enoyl-CoA hydratase and epimerase and
isomerase/3-hydroxyacyl-CoA dehydrogenase [Escherichia
coli O111:H- str. 11128]
gi|291323506|gb|EFE62934.1| fatty oxidation complex [Escherichia coli B088]
gi|308119547|gb|EFO56809.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
145-7]
gi|323156494|gb|EFZ42649.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EPECa14]
gi|323176733|gb|EFZ62323.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
OK1180]
gi|345337630|gb|EGW70062.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
STEC_B2F1]
gi|345352890|gb|EGW85128.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
3030-1]
gi|378046408|gb|EHW08787.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC8A]
gi|378047781|gb|EHW10139.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC8B]
gi|378053245|gb|EHW15545.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC8C]
gi|378064930|gb|EHW27080.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC8E]
gi|378073534|gb|EHW35581.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC9A]
gi|378076928|gb|EHW38926.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC9B]
gi|378083688|gb|EHW45619.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC9C]
gi|378090053|gb|EHW51893.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC9D]
gi|378094962|gb|EHW56753.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC9E]
gi|378099603|gb|EHW61307.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC10A]
gi|378105718|gb|EHW67357.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC10B]
gi|378116007|gb|EHW77540.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC10D]
gi|378130395|gb|EHW91759.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC10F]
gi|386168034|gb|EIH34550.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
96.0497]
gi|386198330|gb|EIH92513.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
JB1-95]
gi|386256796|gb|EIJ12290.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
900105 (10e)]
gi|388345468|gb|EIL11239.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O111:H11 str. CVM9534]
gi|388353818|gb|EIL18792.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O111:H11 str. CVM9545]
gi|388358410|gb|EIL22867.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O111:H8 str. CVM9570]
gi|388360357|gb|EIL24576.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O111:H8 str. CVM9574]
gi|388365962|gb|EIL29724.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O26:H11 str. CVM9942]
gi|388374019|gb|EIL37242.1| fused enoyl-CoA hydratase and epimerase and
isomerase/3-hydroxyacyl-CoA dehydrogenase [Escherichia
coli O26:H11 str. CVM10026]
gi|394384460|gb|EJE62020.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O111:H8 str. CVM9602]
gi|394388984|gb|EJE66182.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O26:H11 str. CVM10224]
gi|394390351|gb|EJE67365.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O111:H8 str. CVM9634]
gi|394399651|gb|EJE75655.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O111:H11 str. CVM9553]
gi|394402971|gb|EJE78647.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O26:H11 str. CVM10021]
gi|394412679|gb|EJE86809.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O111:H11 str. CVM9455]
gi|394423194|gb|EJE96461.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O26:H11 str. CVM10030]
gi|394430921|gb|EJF03190.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O26:H11 str. CVM9952]
gi|397784901|gb|EJK95754.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
STEC_O31]
gi|408296468|gb|EKJ14709.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
EC1865]
gi|408343709|gb|EKJ58103.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
0.1288]
gi|421934275|gb|EKT92050.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O111:H8 str. CFSAN001632]
gi|421936046|gb|EKT93714.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O26:H11 str. CFSAN001629]
gi|421941754|gb|EKT99130.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O111:H11 str. CFSAN001630]
Length = 714
Score = 342 bits (878), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 231/715 (32%), Positives = 365/715 (51%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R ++E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCVDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>gi|77465534|ref|YP_355037.1| 3-hydroxyacyl-CoA dehydrogenase [Rhodobacter sphaeroides 2.4.1]
gi|77389952|gb|ABA81136.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
[Rhodobacter sphaeroides 2.4.1]
Length = 655
Score = 342 bits (878), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 231/666 (34%), Positives = 339/666 (50%), Gaps = 41/666 (6%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+DG+A++TL NPPVNAL++ + L E + + V+A+VL G F GG DI F
Sbjct: 11 SDGIALLTLANPPVNALSLAVRQRLAALTAELEADESVRAVVLAAEGRVFVGGADIAEFD 70
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ + +PDV + IE +KP +AA+ G ALGGG ELA+GCH RI A +L
Sbjct: 71 RPP---EAPHLPDV-----IAAIEASRKPWIAALNGAALGGGAELALGCHYRIFADTARL 122
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE---E 185
GLPE +LG+IPG TQRLPR +GL+ AIE++ +++++ E + GL D + E E
Sbjct: 123 GLPETSLGLIPGAGGTQRLPRRIGLAPAIEVITAGRTLSAAEAREAGLADRIAAGELIPE 182
Query: 186 LLKVSRLW--ALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQA 243
L +R AL + A P D + + + P A
Sbjct: 183 ALAFARTLDGALPLPASAAPL------ADPGPAFWDEARARIARAARGN------PAPAA 230
Query: 244 CLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPR 303
L+ I G+ G +G+ E + F L D + L H+FFA+RA + + G++P
Sbjct: 231 ALEAIRAGVAEGFAAGLRAERETFLRLRASDEAAALRHLFFAERAALRPAALR--GIEPV 288
Query: 304 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQ 363
+ + VIGGG MGSGIA A + V L E E L G++ +EA V RG +
Sbjct: 289 PLTRAGVIGGGTMGSGIAAALAAAGLEVRLTETGPESLAAGLERVEAIFEAQVKRGLTDR 348
Query: 364 DKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI 423
A + + G + D D+VIEAV E + +K+++F EL + C P ILATNTS +
Sbjct: 349 AGAAERMARVTGTVGLGALADCDLVIEAVFEDLAVKRRVFEELVRLCGPEAILATNTSYL 408
Query: 424 DLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVV 483
D + E R I HFFSPA VM LLEIV T+ + + + + + K+PV
Sbjct: 409 DPERIVEGLPHPHRFIALHFFSPAQVMKLLEIVPLAATAPRTLATGVALAARLGKIPVQA 468
Query: 484 GNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAAT 543
GN GF NR Y A L+ G ID A+R+FGL +GPF++ D+AG +A
Sbjct: 469 GNGEGFIGNRILKRYRAEAEALLLAGATPTEIDEAMRAFGLGMGPFEMQDMAGLDIAFRA 528
Query: 544 SKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRR 602
+ D + P D L+++GR G+ +G G Y Y GS+ P+P P +I
Sbjct: 529 REAARALGQDLP-EGP-GDRLVRAGRLGRKSGGGWYDYAPGSRLPQPSPEAAALIAPL-- 584
Query: 603 LSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRG 662
+ PG +P + EI + ++ + E R+ +EG+ SD+D V G FP ++G
Sbjct: 585 ---VTPGPRP---SGTEIADRLIAAMAEEGQRICDEGLAQSPSDIDLVEVHGYGFPRHKG 638
Query: 663 GIVFWA 668
G +F A
Sbjct: 639 GPMFHA 644
>gi|374368697|ref|ZP_09626743.1| 3-hydroxyacyl-CoA dehydrogenase [Cupriavidus basilensis OR16]
gi|373099820|gb|EHP40895.1| 3-hydroxyacyl-CoA dehydrogenase [Cupriavidus basilensis OR16]
Length = 752
Score = 342 bits (878), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 228/717 (31%), Positives = 362/717 (50%), Gaps = 28/717 (3%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+ ++ + +PPVNAL++ VAGL + + + +++ G F G DI F
Sbjct: 18 IGLLCIDHPPVNALSVATVAGLDAQLAAFEADPSLDGLLIWCAGRTFVAGGDIAQFD--- 74
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
A D + P ++ IE ++ + A + G ALGGGLELA+ CH R+A P ++GLP
Sbjct: 75 -APDFTAAP---YNRILARIEASERLVAAVLHGTALGGGLELALACHYRVAVPGARVGLP 130
Query: 135 ELTLGVIPGT---QRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 191
E+ LG++PG+ QRLPR G A+++ML + + +E G++DA+V E L
Sbjct: 131 EIKLGLLPGSLGSQRLPRACGAPLALDLMLSGRMLDAEAALAAGIVDALVPGEPL-AAGL 189
Query: 192 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 251
+ D+ RR P R + + L A A + P A + +E
Sbjct: 190 NFLEDLLERRVPPRRLSTLSVPVAGLPPG--FFTQALQHATRERARYPAAAAIVQAVEAA 247
Query: 252 IVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVI 311
G EA + V SR L H+FFA+R ++VP + G+KPR + V+
Sbjct: 248 ASLPFAEGEAVEAALLAACVASPESRALRHLFFAERQAARVPRIPS-GIKPRALHTAGVV 306
Query: 312 GGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALK 371
G G MG IA + + V L E + L KG+ + A+ G+L D +
Sbjct: 307 GAGTMGRRIAMSLADAGLPVTLVEASDGALAKGLAAMRAHYEAGAAAGRLRPDAVAKRMG 366
Query: 372 MLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEK 431
++ G LDY ++VIEAV+E + LKQ++ + L + C P I+ATNTST+D+ ++ E
Sbjct: 367 LIAGTLDYGALAGCELVIEAVVEDMALKQQVCARLGRICKPGAIIATNTSTLDVEVLAEA 426
Query: 432 TSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAV 491
+ G HF +PA+ L+E+VR + V++ M + + + KV VV G C GF
Sbjct: 427 SGRPGDFAGLHFRNPANGGRLIEVVRGSAIAPDVLVTAMDLARRLGKVAVVTGVCFGFIG 486
Query: 492 NRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAF 551
NR Y + + L+ GV R+D+ ++++G+ +GP ++LDLAG A E+ KA
Sbjct: 487 NRMAEAYLRESEFLLMEGVSPARLDAVMQAYGMAMGPCRMLDLAGIDTGAKIVLEYGKAG 546
Query: 552 ---PDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMP 608
PD ++++ +V L GR G +G G Y Y G +P DP I R I+
Sbjct: 547 GLPPDPAYRA-VVRTLFMLGRLGCKSGAGYYRYPDG-EPVADPEAERICAALGRAHGIV- 603
Query: 609 GGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWA 668
+ + + EIVE ++FP++NE+ ++LEEG+ R D+D G FP Y GG V+ A
Sbjct: 604 --RRTDIADAEIVERLMFPLINEAAKLLEEGMACRPGDIDMVWTAGYGFPDYLGGPVWQA 661
Query: 669 DAVGANYVYTSLKKWSQLYGN---FFKPSRFLEERATKGIPL---SAPVSSSSTSRA 719
D +G + L+++++L GN ++ S L A G L SAP S++ + A
Sbjct: 662 DCIGLPRIKAGLERYARLRGNPYDYWDISPLLAALARGGQRLSDWSAPTSAADAAPA 718
>gi|218559253|ref|YP_002392166.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli S88]
gi|432363417|ref|ZP_19606583.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE5]
gi|254788662|sp|B7MGV7.1|FADJ_ECO45 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|218366022|emb|CAR03766.1| fused enoyl-CoA hydratase and epimerase and isomerase ;
3-hydroxyacyl-CoA dehydrogenase [Escherichia coli S88]
gi|430886149|gb|ELC09010.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE5]
Length = 714
Score = 342 bits (878), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 231/715 (32%), Positives = 366/715 (51%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQIRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + ++ +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEVLARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQAVKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L ++FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASTDVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPRGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCATHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G + ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIMPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGCKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R L+E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCLDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E + +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCDRLVEMSERG 702
>gi|301024178|ref|ZP_07187886.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
69-1]
gi|419920497|ref|ZP_14438612.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli KD2]
gi|432816094|ref|ZP_20049878.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE115]
gi|300396665|gb|EFJ80203.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
69-1]
gi|388384677|gb|EIL46392.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli KD2]
gi|431364318|gb|ELG50862.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE115]
Length = 714
Score = 342 bits (878), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 229/713 (32%), Positives = 366/713 (51%), Gaps = 33/713 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIANCKTAQEAEALARQGQQLMAE-IHALPVPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 MCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPQSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDRQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDAS 651
++ P+I G+ ++ ++ E + ++NE+ R L+E ++ D D +
Sbjct: 600 AIYPLI-------GTQGQGR---LSAPQVAERCVMLMLNEAVRCLDEQVIRSVRDGDIGA 649
Query: 652 VLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
V G+ FP + GG + D++GA V +++ + YG+ F P L E + +G
Sbjct: 650 VFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMSKRG 702
>gi|357027745|ref|ZP_09089810.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Mesorhizobium
amorphae CCNWGS0123]
gi|355540380|gb|EHH09591.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Mesorhizobium
amorphae CCNWGS0123]
Length = 659
Score = 342 bits (878), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 227/659 (34%), Positives = 332/659 (50%), Gaps = 26/659 (3%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGV ++T+ NPPVNAL+ + GL + A S + +V+TG G F G DI F
Sbjct: 16 DGVLVVTIDNPPVNALSTEVREGLCRALDHAVSLEGAAGVVITGAGRAFVAGADIREFAT 75
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
A ++PDV+ IE KP+VAA+ G ALGGG E+A+ CH R+A+ G
Sbjct: 76 PAAA---PILPDVT-----QRIEQSDKPVVAAINGAALGGGAEIALACHGRVASMAAIFG 127
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 189
LPE+ LG++PG TQRLPRLVG + A+EM+ +S+ ++E LGLIDA+ V
Sbjct: 128 LPEIKLGIVPGAGGTQRLPRLVGAAHAVEMIGSGRSVKADEAQSLGLIDALGDDPVAEAV 187
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
+ + A R+ + D+ + + AR+VL AR Q A L +E
Sbjct: 188 ALAHGMAKAPLRRTGELACVPADEAETEAVARKVLARARGQVAPAEAVRLVRVAALTSLE 247
Query: 250 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 309
+G+ E F L D + L HVFFA+R KV + G+ PR V V
Sbjct: 248 KGLA--------DERATFLRLRDSDEAAALRHVFFAERQAGKVAKLE--GISPRPVVTVG 297
Query: 310 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 369
++G GLMGSGIA + + V+ E + KG I + G+LT D
Sbjct: 298 IVGLGLMGSGIAVSALTAGYCVIGVEQTDDDAQKGRTCIVGLLDKAAQSGRLTPDAREAC 357
Query: 370 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 429
L+ L + + VD+ IEAV +++ +K + L+ P+ ILATNTS +D + +
Sbjct: 358 LQRLAATANLTALSGVDLAIEAVFDNLAIKTDLLRRLDGIVRPNTILATNTSYLDPSELA 417
Query: 430 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 489
T +RI+G HFFSPA+VM L+E++ T V+ + K + K+PVV G GF
Sbjct: 418 AATVHPERIVGLHFFSPANVMRLVEVIDCAATRLDVLATALAFAKRLGKLPVVCGAAEGF 477
Query: 490 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDK 549
NR F Y + A +V G ID+A+ ++G P+G F + D+AG +A A K
Sbjct: 478 IGNRIFSAYRREAEFMVEDGAMPEEIDAALEAWGFPMGIFAVNDMAGLEIAWARRKRNAA 537
Query: 550 AFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPG 609
+ D L ++GR G+ G+G Y Y G K DP V +IE ++ I+PG
Sbjct: 538 TRNPNERYVEIADHLCEAGRLGRKTGRGWYDYSSGEK-MVDPQVTALIEAAQKAKGIVPG 596
Query: 610 GKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWA 668
+ EIV +L + E +L EGI A D+D + G FP+++GG +F A
Sbjct: 597 ----RFSADEIVAHLLRAMAAEGSVLLSEGIAGSAGDIDLVMINGYGFPAHKGGPMFQA 651
>gi|417592637|ref|ZP_12243333.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
2534-86]
gi|345338476|gb|EGW70906.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
2534-86]
Length = 714
Score = 342 bits (878), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 231/715 (32%), Positives = 365/715 (51%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R ++E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCVDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>gi|332561192|ref|ZP_08415510.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding [Rhodobacter
sphaeroides WS8N]
gi|332274990|gb|EGJ20306.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding [Rhodobacter
sphaeroides WS8N]
Length = 655
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 236/664 (35%), Positives = 340/664 (51%), Gaps = 39/664 (5%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DG+A++TL NPPVNAL + + L E + + V+A+VLT G F GG DI F +
Sbjct: 12 DGIALLTLANPPVNALGLAVRQRLAALTAELEADESVRAVVLTAEGRVFVGGADIAEFDR 71
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ +PDV + IE +KP +AA+ G ALGGG ELA+GCH RI A +LG
Sbjct: 72 PP---EAPHLPDV-----IAAIEASRKPWIAALNGAALGGGAELALGCHYRIFADTARLG 123
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE---EL 186
LPE +LG+IPG TQRLPR +GL+ AIE++ +++++ E + L D + E E
Sbjct: 124 LPETSLGLIPGAGGTQRLPRRIGLAPAIEVITAGRTLSAAEAREADLADRIAAGELIAEA 183
Query: 187 LKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVL-KLARLQAKKTAPNMPQHQACL 245
L +R LD A L R L++ AR + + A P A L
Sbjct: 184 LAFAR--TLDGA---------LPRPASAAPLADPGPAFWDEARARIARAARGNPAPAAAL 232
Query: 246 DVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGV 305
+ I G+ G +G+ E + F L D + L H+FFA+RA + V G++P +
Sbjct: 233 EAIRAGVAEGFAAGLRAERETFLRLRASDEAAALRHLFFAERAALR--PVALRGIEPVPL 290
Query: 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDK 365
+ VIGGG MGSGIA A + V L E E L G+ +EA V RG +
Sbjct: 291 TRAGVIGGGTMGSGIAAALAAAGLEVRLAETGPEALAAGLGRVEAIFEAQVKRGLTDRAG 350
Query: 366 ANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL 425
A + + G + D D+VIEAV E + +K+++F EL + C P ILATNTS +D
Sbjct: 351 ATERMARVTGTVGLGALADCDLVIEAVFEDLAVKRRVFEELVRLCGPEAILATNTSYLDP 410
Query: 426 NIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 485
+ E R I HFFSPA VM LLEIV T+ + + + + + K+PV GN
Sbjct: 411 ERIVEGLPHPQRFIALHFFSPAQVMKLLEIVPLAATAPRTLATGVALAARLGKIPVQAGN 470
Query: 486 CTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSK 545
GF NR Y A L+ G ID A+R+FGL +GPF++ D+AG +A +
Sbjct: 471 GEGFIGNRILKRYRAEAEALLLAGATPTEIDEAMRAFGLGMGPFEMQDMAGLDIAFRARE 530
Query: 546 EFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLS 604
D + P D L+++GR G+ +G G Y Y GS+ P+P P +I
Sbjct: 531 AARALGQDLP-EGP-GDRLVRAGRLGRKSGGGWYDYAPGSRQPQPSPEAAALIAPL---- 584
Query: 605 NIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGI 664
+ PG +P + EI + ++ + E R+ +EG+ SD+D V G FP ++GG
Sbjct: 585 -VTPGPRP---SGTEIADRLIAAMAEEGQRICDEGLAQSPSDIDLVEVHGYGFPRHKGGP 640
Query: 665 VFWA 668
+F A
Sbjct: 641 MFHA 644
>gi|330829737|ref|YP_004392689.1| Fatty oxidation complex subunit alpha [Aeromonas veronii B565]
gi|406677017|ref|ZP_11084202.1| fatty oxidation complex, alpha subunit FadJ [Aeromonas veronii
AMC35]
gi|423209569|ref|ZP_17196123.1| fatty oxidation complex, alpha subunit FadJ [Aeromonas veronii
AER397]
gi|328804873|gb|AEB50072.1| Fatty oxidation complex, alpha subunit [Aeromonas veronii B565]
gi|404617427|gb|EKB14363.1| fatty oxidation complex, alpha subunit FadJ [Aeromonas veronii
AER397]
gi|404625331|gb|EKB22148.1| fatty oxidation complex, alpha subunit FadJ [Aeromonas veronii
AMC35]
Length = 716
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 246/732 (33%), Positives = 374/732 (51%), Gaps = 51/732 (6%)
Query: 1 MAAPRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVLT-GN 57
M+A +++V DG+ I+T+ P +N L V ++ E D+ +V+T G
Sbjct: 2 MSAKTFSLDVRKDGIGILTMDVPGESMNTLKAAFVEEIRTVLAEVKRNKDLIGLVITSGK 61
Query: 58 GGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELA 117
F G DI + A D + E+ IE P++AA+ G LGGGLELA
Sbjct: 62 KDSFIAGADITMLAACTSAKDAETLSREGQEIFAE-IEGLTIPVIAAIHGPCLGGGLELA 120
Query: 118 MGCHARIAAP--KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGW 172
+ CH R+ K+ LGLPE+ LG++PG TQRLPRL+G++KA+++ML K + +++
Sbjct: 121 LACHGRVVTDHGKSVLGLPEVQLGLLPGSGGTQRLPRLIGVAKALDLMLTGKQVRAKQAK 180
Query: 173 KLGLIDAVVTSEELLKVSRLWALDIAARRKP---WIRSLH----RTDKLGSLSEAREVL- 224
KLGL+D VV LL A+ +A + KP R L T+KLG R+VL
Sbjct: 181 KLGLVDDVVPPSILLDA----AIKLAKKGKPRHQLKRDLQGKVLETNKLG-----RKVLF 231
Query: 225 -KLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVF 283
+ ++ KT N P + LDV+ G+ G +G++ E++ F ELVM S L +F
Sbjct: 232 DQASKGVKAKTRGNYPAPERILDVVRIGVEEGMKAGLVAESRHFGELVMTAESAALRSIF 291
Query: 284 FAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIA-TAHILNNIYVVLKEVNSEYLL 342
FA K VT G +PR V AV+GGGLMG GIA + V +K+V S +
Sbjct: 292 FATTEMKK--EVTYQGAEPRKVAHAAVLGGGLMGGGIAFVTATKAGVPVRIKDVASAGIG 349
Query: 343 KGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKI 402
++ + + R + + + + +L G LDYS F VDMV+EAV E + LK ++
Sbjct: 350 NAMRYSYDILAKKLKRRHILRSELEKQMSLLTGTLDYSGFHRVDMVVEAVFEDLALKHQM 409
Query: 403 FSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTS 462
++E C H + A+NTS++ +N + + + +R++G H+FSP MPL EI+ TS
Sbjct: 410 VKDVEHECGEHTVFASNTSSLPINQIAAEAAHPERVVGLHYFSPVDKMPLAEIIPHAGTS 469
Query: 463 AQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSF 522
A+ + + + K P+VV + GF VNR PY A LV G V +DSA+ F
Sbjct: 470 AETVATTLAFARAQGKTPIVVKDEAGFYVNRILAPYMNEAARLVLEGEPVEVLDSALLDF 529
Query: 523 GLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP-LVDLLLKSGRNGKANGKGLYTY 581
G P+GP LLD G V A S +K FQ+P D LL++ R G+ NGKG Y Y
Sbjct: 530 GFPVGPITLLDEVGIDVGAKISPILEKELGGEQFQAPKAFDKLLQNDRKGRKNGKGFYLY 589
Query: 582 EKGS----------KPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNE 631
K + K D SV ++ I P K + +EI E + ++NE
Sbjct: 590 GKAAPRNKLTGKEGKKTVDESVYGVL-------GIKPSAK---LARQEIAERCVLLMLNE 639
Query: 632 SCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFF 691
+ L+ G+V A D D ++ G+ FP + GG + D +G +++ L+ + + +G+ F
Sbjct: 640 AAMALDSGVVASARDGDIGAIFGIGFPPFLGGPFRYMDTLGIDHLVGRLEYYQKRHGDRF 699
Query: 692 KPSRFLEERATK 703
P L+ A +
Sbjct: 700 APCARLKAMAAE 711
>gi|218690500|ref|YP_002398712.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli ED1a]
gi|419701173|ref|ZP_14228775.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli SCI-07]
gi|422379520|ref|ZP_16459715.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
57-2]
gi|432733074|ref|ZP_19967906.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE45]
gi|432760159|ref|ZP_19994653.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE46]
gi|254788658|sp|B7MY16.1|FADJ_ECO81 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|218428064|emb|CAR08982.2| fused enoyl-CoA hydratase and epimerase and isomerase ;
3-hydroxyacyl-CoA dehydrogenase [Escherichia coli ED1a]
gi|324009263|gb|EGB78482.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
57-2]
gi|380347919|gb|EIA36205.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli SCI-07]
gi|431275289|gb|ELF66333.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE45]
gi|431307813|gb|ELF96103.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE46]
Length = 714
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 231/715 (32%), Positives = 366/715 (51%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + ++ +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEVLARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQAVKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L ++FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASTEVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPRGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCATHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G + ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R L+E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCLDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E + +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCDRLVEMSERG 702
>gi|432617460|ref|ZP_19853573.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE75]
gi|431153448|gb|ELE54352.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE75]
Length = 714
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 229/713 (32%), Positives = 366/713 (51%), Gaps = 33/713 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIANCKTAQEAEALARQGQQLMAE-IHALPVPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 MCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPQSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G G EA+ F ELVM S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSGGYDAEARAFGELVMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDRQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDTALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDAS 651
++ P+I G+ ++ ++ E + ++NE+ R L+E ++ D D +
Sbjct: 600 AIYPLI-------GTQGQGR---LSAPQVAERCVMLMLNEAVRCLDEQVIRSVRDGDIGA 649
Query: 652 VLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
V G+ FP + GG + D++GA V +++ + YG+ F P L E + +G
Sbjct: 650 VFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMSKRG 702
>gi|419216424|ref|ZP_13759424.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC8D]
gi|419268062|ref|ZP_13810414.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC10C]
gi|378061438|gb|EHW23623.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC8D]
gi|378110713|gb|EHW72307.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC10C]
Length = 712
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 231/715 (32%), Positives = 365/715 (51%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 6 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 65
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 66 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 124
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 125 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 184
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 185 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 240
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 241 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 299
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 300 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 358
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 359 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 418
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 419 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 478
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 479 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 538
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 539 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 597
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R ++E ++ D D
Sbjct: 598 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCVDEQVIRSVRDGDI 645
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 646 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 700
>gi|194432919|ref|ZP_03065203.1| fatty oxidation complex, alpha subunit FadJ [Shigella dysenteriae
1012]
gi|417673098|ref|ZP_12322554.1| fatty oxidation complex, alpha subunit FadJ [Shigella dysenteriae
155-74]
gi|420348240|ref|ZP_14849629.1| fatty oxidation complex, alpha subunit FadJ [Shigella boydii
965-58]
gi|194418907|gb|EDX34992.1| fatty oxidation complex, alpha subunit FadJ [Shigella dysenteriae
1012]
gi|332090133|gb|EGI95232.1| fatty oxidation complex, alpha subunit FadJ [Shigella dysenteriae
155-74]
gi|391269243|gb|EIQ28155.1| fatty oxidation complex, alpha subunit FadJ [Shigella boydii
965-58]
Length = 714
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 232/715 (32%), Positives = 366/715 (51%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAIITIDVPDEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQTLKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R ++E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCVDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>gi|432554428|ref|ZP_19791150.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE47]
gi|433198978|ref|ZP_20382878.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE94]
gi|431083474|gb|ELD89650.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE47]
gi|431720991|gb|ELJ84992.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE94]
Length = 714
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 231/715 (32%), Positives = 366/715 (51%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + ++ +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEVLARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQAVKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L ++FFA K P +
Sbjct: 243 NYPTTERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASTEVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPRGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCATHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G + ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R L+E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCLDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E + +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCDRLVEMSERG 702
>gi|91211637|ref|YP_541623.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli UTI89]
gi|117624529|ref|YP_853442.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli APEC O1]
gi|237704820|ref|ZP_04535301.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia sp. 3_2_53FAA]
gi|386600263|ref|YP_006101769.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
IHE3034]
gi|386603639|ref|YP_006109939.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli UM146]
gi|417085628|ref|ZP_11953034.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli cloneA_i1]
gi|419947329|ref|ZP_14463682.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli HM605]
gi|422357918|ref|ZP_16438579.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
110-3]
gi|422749617|ref|ZP_16803529.1| fatty oxidation complex [Escherichia coli H252]
gi|422755761|ref|ZP_16809585.1| fatty oxidation complex [Escherichia coli H263]
gi|422837608|ref|ZP_16885581.1| fatty acid oxidation complex subunit alpha [Escherichia coli H397]
gi|432574417|ref|ZP_19810897.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE55]
gi|432588665|ref|ZP_19825021.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE58]
gi|432598325|ref|ZP_19834600.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE62]
gi|432755153|ref|ZP_19989702.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE22]
gi|432779287|ref|ZP_20013520.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE59]
gi|432788225|ref|ZP_20022356.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE65]
gi|432821674|ref|ZP_20055365.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE118]
gi|432827806|ref|ZP_20061457.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE123]
gi|433008378|ref|ZP_20196795.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE229]
gi|433164212|ref|ZP_20348950.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE179]
gi|433169317|ref|ZP_20353945.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE180]
gi|123387869|sp|Q1R972.1|FADJ_ECOUT RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|166972670|sp|A1ADI8.1|FADJ_ECOK1 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|91073211|gb|ABE08092.1| putative enzyme [Escherichia coli UTI89]
gi|115513653|gb|ABJ01728.1| putative 3-hydroxyacyl-CoA dehydrogenase [Escherichia coli APEC O1]
gi|226901186|gb|EEH87445.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia sp. 3_2_53FAA]
gi|294493788|gb|ADE92544.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
IHE3034]
gi|307626123|gb|ADN70427.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli UM146]
gi|315288286|gb|EFU47685.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
110-3]
gi|323952132|gb|EGB48006.1| fatty oxidation complex [Escherichia coli H252]
gi|323955861|gb|EGB51616.1| fatty oxidation complex [Escherichia coli H263]
gi|355351134|gb|EHG00327.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli cloneA_i1]
gi|371610517|gb|EHN99045.1| fatty acid oxidation complex subunit alpha [Escherichia coli H397]
gi|388410897|gb|EIL71098.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli HM605]
gi|431108015|gb|ELE12179.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE55]
gi|431120998|gb|ELE23996.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE58]
gi|431130277|gb|ELE32382.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE62]
gi|431301882|gb|ELF91079.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE22]
gi|431326103|gb|ELG13465.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE59]
gi|431336792|gb|ELG23893.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE65]
gi|431367326|gb|ELG53803.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE118]
gi|431372002|gb|ELG57704.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE123]
gi|431523708|gb|ELI00845.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE229]
gi|431687517|gb|ELJ53068.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE179]
gi|431688169|gb|ELJ53710.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE180]
Length = 714
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 231/715 (32%), Positives = 366/715 (51%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQIRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + ++ +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEVLARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQAVKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L ++FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASTDVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPRGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCATHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G + ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIMPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R L+E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCLDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E + +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCDRLVEMSERG 702
>gi|417139094|ref|ZP_11982621.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
97.0259]
gi|386157739|gb|EIH14079.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
97.0259]
Length = 714
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 231/715 (32%), Positives = 366/715 (51%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIANCKTAQEAEALARQGQQLMAE-IHALPVPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 MCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPQSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDRQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R L+E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCLDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E + +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMSKRG 702
>gi|306814548|ref|ZP_07448710.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli NC101]
gi|432382078|ref|ZP_19625021.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE15]
gi|432387891|ref|ZP_19630779.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE16]
gi|432514641|ref|ZP_19751864.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE224]
gi|432612198|ref|ZP_19848360.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE72]
gi|432646911|ref|ZP_19882700.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE86]
gi|432656493|ref|ZP_19892196.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE93]
gi|432699770|ref|ZP_19934923.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE169]
gi|432746382|ref|ZP_19981047.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE43]
gi|432905629|ref|ZP_20114464.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE194]
gi|432938725|ref|ZP_20136968.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE183]
gi|432972541|ref|ZP_20161408.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE207]
gi|432986098|ref|ZP_20174820.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE215]
gi|433039338|ref|ZP_20226937.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE113]
gi|433083297|ref|ZP_20269753.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE133]
gi|433101884|ref|ZP_20287970.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE145]
gi|433144937|ref|ZP_20330079.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE168]
gi|433189122|ref|ZP_20373220.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE88]
gi|305851942|gb|EFM52394.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli NC101]
gi|430906090|gb|ELC27696.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE16]
gi|430907553|gb|ELC29051.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE15]
gi|431041397|gb|ELD51898.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE224]
gi|431148372|gb|ELE49663.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE72]
gi|431179566|gb|ELE79458.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE86]
gi|431190359|gb|ELE89758.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE93]
gi|431242746|gb|ELF37136.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE169]
gi|431290920|gb|ELF81443.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE43]
gi|431432143|gb|ELH13915.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE194]
gi|431462711|gb|ELH42918.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE183]
gi|431482043|gb|ELH61750.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE207]
gi|431499563|gb|ELH78584.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE215]
gi|431551438|gb|ELI25424.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE113]
gi|431601421|gb|ELI70937.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE133]
gi|431619478|gb|ELI88402.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE145]
gi|431660914|gb|ELJ27771.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE168]
gi|431705828|gb|ELJ70418.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE88]
Length = 714
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 231/715 (32%), Positives = 366/715 (51%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + ++ +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEVLARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQAVKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L ++FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASTDVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPRGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCATHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G + ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHIDTALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIMPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R L+E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCLDEQVIRSVRDGDL 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E + +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCDRLVEMSERG 702
>gi|333893918|ref|YP_004467793.1| multifunctional fatty acid oxidation complex subunit alpha
[Alteromonas sp. SN2]
gi|332993936|gb|AEF03991.1| multifunctional fatty acid oxidation complex subunit alpha
[Alteromonas sp. SN2]
Length = 712
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 246/714 (34%), Positives = 374/714 (52%), Gaps = 34/714 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ ++GVAI+T+ P +N L + ++ + +K +VL +G F
Sbjct: 13 TLTKQDNGVAILTMDVPGESMNTLKAAFGDEISAMLDDIDADTSIKGVVLVSGKANSFVA 72
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DI++ + A D + + + + + IE K VAA+ G ALGGGLELA+ CH R
Sbjct: 73 GADISMLAACNTAEDATTIA-AGGQAIFDRIERMKATFVAAINGPALGGGLELALACHYR 131
Query: 124 IA--APKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
I +P TQ+GLPE+ LG++PG TQRLPRL+G+ +A++MML +++ K G++D
Sbjct: 132 ICTDSPSTQVGLPEVQLGLLPGSGGTQRLPRLIGIQQAMKMMLTGAPARAKQAKKYGIVD 191
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRT--DK-LGSLSEAREVL-KLARLQA-KK 233
VV LLKV+ +AL +RKP + ++ DK L + R ++ K AR K
Sbjct: 192 DVVPHSVLLKVAEQFAL----KRKPEREAPQKSVMDKMLENTGPGRGMMFKKAREATFAK 247
Query: 234 TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 293
T N P +DVIE G+ G +G+ EA+ F +LVM S L +FFA K
Sbjct: 248 TKGNYPAPGYIIDVIETGMRDGIEAGLKAEAEAFGKLVMTPESFQLRQIFFATTDMKKEN 307
Query: 294 NVTDIGLKPRGVRKVAVIGGGLMGSGIA-TAHILNNIYVVLKEVNSEYLLKGIKTIEANV 352
+ G+ P ++KV V+GGGLMG GIA + V +K+V E + +K +
Sbjct: 308 GIE--GVAPEKMKKVGVLGGGLMGGGIAFVTSTKAGVPVRIKDVRPEGIANAMKYSYDIL 365
Query: 353 RGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPP 412
V + + + L ++ G LDYS ++D D+V+EAV E + LKQK+ +++E+ C
Sbjct: 366 NKKVKKRFMRSSEMQKQLSLITGTLDYSGYQDTDIVVEAVFEDLDLKQKMVADIEENCKE 425
Query: 413 HCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTV 472
+ I A+NTS+I + + K + + +IG H+FSP MPL E++ E TS QVI +
Sbjct: 426 NTIFASNTSSIPITQIAAKAARPENVIGLHYFSPVDKMPLAEVIAHETTSDQVISSTVEF 485
Query: 473 GKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLL 532
K K PVVV + GF VNR PY A L+ G + ID ++ FG P+GP +LL
Sbjct: 486 AKKQGKTPVVVKDGAGFYVNRILAPYMNEAASLILAGEPIEHIDKSLVKFGFPVGPVKLL 545
Query: 533 DLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPS 592
D G V +AF +R D +L GR GK N KG Y+YE G KP +
Sbjct: 546 DEVGIDVGTKIIPFLVEAFGERFTAPSAFDKVLADGRKGKKNQKGFYSYE-GKKPGKE-- 602
Query: 593 VLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASV 652
+ E L + P K ++EKE+ E + ++NE+ R L+E ++ A D D ++
Sbjct: 603 ---VDESIYSLLGLTPSTK---LSEKEVAERCVLMMLNEAARCLDESVIRNARDGDIGAI 656
Query: 653 LGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL----EERAT 702
G+ FP + GG + D +G +V L ++ G+ F P+ L EE +T
Sbjct: 657 FGIGFPPFLGGPFRYMDTLGIKHVVERLNHYASTVGDKFTPADVLVKMAEENST 710
>gi|417232239|ref|ZP_12033637.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
5.0959]
gi|417608981|ref|ZP_12259484.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
STEC_DG131-3]
gi|345358190|gb|EGW90378.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
STEC_DG131-3]
gi|386205238|gb|EII09749.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
5.0959]
Length = 714
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 231/715 (32%), Positives = 365/715 (51%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R ++E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCVDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>gi|408416053|ref|YP_006626760.1| enoyl-CoA hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase/3-hydroxyacyl-CoA
dehydrogenase/3-hydroxybutyryl-CoA epimerase [Bordetella
pertussis 18323]
gi|401778223|emb|CCJ63616.1| Enoyl-CoA hydratase (EC 4.2.1.17) /
Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC
5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)
/ 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
[Bordetella pertussis 18323]
Length = 694
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 228/697 (32%), Positives = 352/697 (50%), Gaps = 31/697 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSGGFDINVFQKV 73
+ ++TL +PPVNAL + GL E+ +R DV+A++L + G FS G DI F +
Sbjct: 11 IEVVTLDSPPVNALGRTLRHGLAQCLEQVYARPDVRALLLVSARPGIFSAGADIKEFDQA 70
Query: 74 HGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGL 133
D L EL+ + IE+ P+VA ++G ALGG LELA+GCH R+A+P+ LGL
Sbjct: 71 GSDQDAGL-----AELI-DRIENAPVPVVALLDGAALGGALELALGCHYRLASPRASLGL 124
Query: 134 PELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVS 190
PE+ LG++PG TQRLPRLVG A+EM+L + + E + L DA++++++ L+ +
Sbjct: 125 PEIKLGLLPGAGGTQRLPRLVGARHAVEMVLGGEPVGGETALRCKLADALLSADDTLEQA 184
Query: 191 RLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 250
W R P + R L +L+ +A P +
Sbjct: 185 LAWM-----RNAPGGLARRRVASLPALAP---ASIAEAARAAAIRPVGSAAAREAALACL 236
Query: 251 GIVHGGY-SGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 309
G + +G E + F L +R L + FFA+R +V+ R + +VA
Sbjct: 237 AAAQGPFDAGRALERESFARLRDRAEARALRYAFFAERPRPPAGDVS-----ARRIEQVA 291
Query: 310 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 369
V+G G MG+GI + V+ +V+++ L +G + + L R +LT +A
Sbjct: 292 VVGAGTMGTGIVICLADAGLPVIWHDVDADRLAQGRAQVCQHFERLAARKRLTSRQAEQR 351
Query: 370 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 429
+ + + + D+ IEAV E + +K +F EL++ P IL TNTST+D++ +
Sbjct: 352 VAAVATTGEMAGIAQADLAIEAVFEDMAVKCAVFRELDRVLKPGAILGTNTSTLDVDRIA 411
Query: 430 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 489
T ++G HFFSPA VMPLLEIVR T A V+ + + ++K VV G C GF
Sbjct: 412 HSTRRPQDVVGLHFFSPAPVMPLLEIVRGAATHADVVAAAQGLARRLRKTAVVAGVCDGF 471
Query: 490 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDK 549
NR + Y + A L+V G +D+A+R +G +GPFQ+ DLAG V +
Sbjct: 472 IGNRMWHQYLRQAALMVHEGAMPMEVDAALRDWGFAMGPFQVADLAGLDVGDSIRLRQRS 531
Query: 550 AFPDRSFQSPLVDLLLKSGRNGKANGKGLYTY-EKGSKPKPDPSVLPIIEECRRLSNIMP 608
P R + L D + +GR G G G++ Y + G +P+ D V +I R + +
Sbjct: 532 EMPHRPWPDWL-DRVSAAGRLGLKGGSGIHGYPDGGRQPRRDAEVEAMIAAASREAGV-- 588
Query: 609 GGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWA 668
++ EIVE L +V E+ R+LEEGI A+D+D + G FP +RGG A
Sbjct: 589 --SRRAIAADEIVERCLHALVVEAARLLEEGIAASATDVDAVFLAGYGFPRWRGGPCHSA 646
Query: 669 DAVGANYVYTSLKKWSQLYG-NFFKPSRFLEERATKG 704
DA+G V L++ + F++P L A +G
Sbjct: 647 DAMGLPAVVAGLRRRAATAEPEFWQPPGLLARLAAQG 683
>gi|218700819|ref|YP_002408448.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli IAI39]
gi|386625047|ref|YP_006144775.1| fused enoyl-CoA hydratase and epimerase and
isomerase/3-hydroxyacyl-CoA dehydrogenase [Escherichia
coli O7:K1 str. CE10]
gi|254788659|sp|B7NP24.1|FADJ_ECO7I RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|218370805|emb|CAR18618.1| fused enoyl-CoA hydratase and epimerase and isomerase ;
3-hydroxyacyl-CoA dehydrogenase [Escherichia coli IAI39]
gi|349738784|gb|AEQ13490.1| fused enoyl-CoA hydratase and epimerase and
isomerase/3-hydroxyacyl-CoA dehydrogenase [Escherichia
coli O7:K1 str. CE10]
Length = 714
Score = 342 bits (877), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 230/715 (32%), Positives = 367/715 (51%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + ++ +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEVLARQGQQLMAE-IHALPVPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ KT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDAKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPQSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L ++FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASTEVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCATHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G + ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R L+E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCLDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E + +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMSKRG 702
>gi|417587359|ref|ZP_12238129.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
STEC_C165-02]
gi|345336495|gb|EGW68931.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
STEC_C165-02]
Length = 712
Score = 342 bits (877), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 229/713 (32%), Positives = 365/713 (51%), Gaps = 33/713 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 6 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 65
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 66 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPVPVIAAIHGACLGGGLELALACHGR 124
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 125 MCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 184
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 185 DVVPQSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 240
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 241 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 299
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 300 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 358
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 359 RRRHLKASERDRQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 418
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 419 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 478
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 479 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 538
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 539 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 597
Query: 592 SVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDAS 651
++ P+I G+ ++ ++ E + ++NE+ R L+E ++ D D +
Sbjct: 598 AIYPLI-------GTQGQGR---LSAPQVAERCVMLMLNEAVRCLDEQVIRSVRDGDIGA 647
Query: 652 VLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
V G+ FP + GG + D++GA V +++ + YG+ F P L E + +G
Sbjct: 648 VFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMSKRG 700
>gi|109897985|ref|YP_661240.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudoalteromonas atlantica T6c]
gi|109700266|gb|ABG40186.1| 3-hydroxyacyl-CoA dehydrogenase [Pseudoalteromonas atlantica T6c]
Length = 717
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 243/717 (33%), Positives = 373/717 (52%), Gaps = 34/717 (4%)
Query: 1 MAAPRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGN 57
+A T+ +DG+AI+++ P +N L + + D ++ S +K +V ++G
Sbjct: 10 LAPSAFTLTKRDDGIAILSMDVPGETMNTLKVEFGEQVGDMLDQIQSDSAIKGVVVISGK 69
Query: 58 GGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELA 117
F G DI++ A + + + V IED P VAA+ G ALGGGLELA
Sbjct: 70 DNSFVAGADISMLAGCKSAEEAEAIGKGG-QAVFQRIEDMAVPFVAAIHGPALGGGLELA 128
Query: 118 MGCHARIAAP--KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGW 172
+ CH R+ + KTQLGLPE+ LG++PG TQRLPRL+ + +A++MML S+ +++
Sbjct: 129 LACHMRVCSDDNKTQLGLPEVQLGLLPGSGGTQRLPRLISVQQAMKMMLTGASVRAKQAK 188
Query: 173 KLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEA-----REVLKLA 227
K G++D +V LL+V A+++A + KP R + D +G E + + K A
Sbjct: 189 KYGIVDDMVPRSILLEV----AIEMAKKPKPN-RKPVKLDAMGQFLERTPMGRKLMFKQA 243
Query: 228 RLQAK-KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQ 286
R Q + KT N P + +D IE G+ G G EAK F LVM S L +FFA
Sbjct: 244 RKQTQAKTMGNYPSPERIIDCIETGLEKGKAQGFAVEAKHFGHLVMTSESAALRSLFFAT 303
Query: 287 RATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGI 345
K V G+ P+ ++K+ V+GGGLMG GIA + +K++ S+ + +
Sbjct: 304 TEMKKENGVE--GVAPKTLKKIGVLGGGLMGGGIAFVTATKAKLPARIKDIRSDGIAHAM 361
Query: 346 KTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSE 405
K + V R + + + L L G +DY F + D+VIEAV E + LKQ + ++
Sbjct: 362 KYSYDILNKKVKRKFMLHSEMQSQLSRLTGSVDYVGFDNTDVVIEAVFEDLALKQNMVAD 421
Query: 406 LEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQV 465
+E+ C H I A+NTS+I + + K + +IG H+FSP MPL E++ E TS Q
Sbjct: 422 VEEHCSEHTIFASNTSSIPIGQIAAKAKRPENVIGLHYFSPVDKMPLAEVIAHEATSDQT 481
Query: 466 ILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPY-SQSARLLVSLGVDVFRIDSAIRSFGL 524
I + + K K P+VV + GF VNR PY ++SA +L++ G + +ID A+ FG
Sbjct: 482 ISTTVELAKKQGKTPIVVKDGAGFYVNRILAPYMNESAEILLA-GEPIEQIDKALVKFGF 540
Query: 525 PIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKG 584
P+GP +LLD G V F +R +P D LL R GK N +G Y YE G
Sbjct: 541 PVGPIKLLDEVGIDVGTKIGPILVAEFGERFQSAPGFDKLLADDRKGKKNKRGFYNYE-G 599
Query: 585 SKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRA 644
KP + + E L I P + ++E I E + ++NE+ L+EG+V
Sbjct: 600 KKPGKE-----VDESVYDLLGITPNSR---LSEHTIAERCVLLMLNEAAICLDEGVVRNP 651
Query: 645 SDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERA 701
D D ++ G+ FP + GG + D +G N+V L + Q +G+ F P++ L + A
Sbjct: 652 RDGDIGAIFGIGFPPFLGGPFRYMDTLGINHVVERLTHYQQQFGDKFAPAKRLLDMA 708
>gi|432863027|ref|ZP_20087273.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE146]
gi|431404562|gb|ELG87811.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE146]
Length = 714
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 233/715 (32%), Positives = 365/715 (51%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIANCKTAQEAEALARQGQQLMAE-IHALPVPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + + R L +++ G L A + + KT
Sbjct: 187 DVVPQSILLEA----AVELAKQDRASSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+VIE G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVIENGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+EK C H I
Sbjct: 361 RRRHLKASERDRQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEKNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EIV TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIVPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R L+E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCLDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E + +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMSKRG 702
>gi|433005796|ref|ZP_20194224.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE227]
gi|433154460|ref|ZP_20339401.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE176]
gi|431513494|gb|ELH91576.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE227]
gi|431673702|gb|ELJ39893.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE176]
Length = 714
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 231/715 (32%), Positives = 366/715 (51%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQIRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + ++ +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEVLARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQAVKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L ++FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASTDVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPRGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCAIHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G + ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIMPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R L+E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCLDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E + +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCDRLVEMSERG 702
>gi|421602426|ref|ZP_16045030.1| 3-hydroxyacyl-CoA dehydrogenase, partial [Bradyrhizobium sp.
CCGE-LA001]
gi|404265468|gb|EJZ30544.1| 3-hydroxyacyl-CoA dehydrogenase, partial [Bradyrhizobium sp.
CCGE-LA001]
Length = 594
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 203/595 (34%), Positives = 327/595 (54%), Gaps = 19/595 (3%)
Query: 115 ELAMGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEG 171
E+A+ CH R+A + +LGLPE+ LG++PG TQRLPR VG A++M++ I + E
Sbjct: 1 EVALACHFRVAVKEAKLGLPEVKLGLLPGAGGTQRLPRAVGPELAVKMIVGGDPIGAAEA 60
Query: 172 WKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQA 231
K GLI+ +V E + + A ++P R KL + R + A
Sbjct: 61 LKKGLIEEIV--EGPASGGEAFVRKLIAEKRPLRRLRDDDSKLAAAKADRSIFTNAVAAM 118
Query: 232 KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 291
K + + A D + I G+ KE + F +LV D S+ + FFA+R +K
Sbjct: 119 TKKSRGLEAPFAAADAVGCAIDLPFDEGLKKEREGFLKLVASDQSKAQRYAFFAEREANK 178
Query: 292 VPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEAN 351
+ V + G K R V +VA++G G MG GIA + I V L E E L +G+ ++ N
Sbjct: 179 IAGVPE-GTKGRPVNRVAILGAGTMGGGIAMSFANAGIPVTLIETAEEQLKRGMGIMQKN 237
Query: 352 VRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACP 411
RG + D + +++G + D D+VIEAV E++ +K+++F +L++
Sbjct: 238 WEATAARGGIPADAPAKRMALIEGKVGIENVGDADLVIEAVFETMAVKKEVFGKLDQYAK 297
Query: 412 PHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMT 471
P +LA+NTS ++++ + + T ++G HFFSPA+VM L EIVR ++T+ ++ +T
Sbjct: 298 PGAVLASNTSYLNIDEIAKSTKRPQDVLGMHFFSPANVMKLCEIVRADKTAPDALVTAVT 357
Query: 472 VGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQL 531
+ + I KVP VVG C GF NR S+ + L+ G ++D+ + FG+P+GPF +
Sbjct: 358 IARKIAKVPAVVGVCDGFVGNRMLAQRSKQSEKLLFEGALPQQVDAVVTKFGMPMGPFAM 417
Query: 532 LDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPD 590
DLAG + + K DR +S + D L ++GR G+ GKG Y YE GS+ P PD
Sbjct: 418 GDLAGLDIGWRSRK-------DRGIKSEIADALCEAGRFGQKTGKGYYKYEAGSRAPMPD 470
Query: 591 PSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDA 650
P V +I+E + + G K V+++EI+E +++P+VNE ++LEEGI R SD+D
Sbjct: 471 PEVEKLIDE----TLLRLGRKKRVVSDEEILERMMYPMVNEGAKILEEGIAARPSDIDVV 526
Query: 651 SVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN-FFKPSRFLEERATKG 704
+ G +P YRGG +FWAD+VG ++ L +++ + +P+ L++ A +G
Sbjct: 527 WLYGYGWPIYRGGPMFWADSVGLKHIADRLSFYAKETNDPSLEPAPLLKKLAAEG 581
>gi|33597294|ref|NP_884937.1| enoyl-CoA isomerase [Bordetella parapertussis 12822]
gi|33573721|emb|CAE38018.1| Putative enoyl-CoA isomerase [Bordetella parapertussis]
Length = 694
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 229/697 (32%), Positives = 352/697 (50%), Gaps = 31/697 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSGGFDINVFQKV 73
+ ++TL +PPVNAL + GL E+A +R DV+A++L + G FS G DI F +
Sbjct: 11 IGVVTLDSPPVNALGRTLRHGLAQCLEQAYARPDVRALLLVSARPGIFSAGADIKEFDQA 70
Query: 74 HGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGL 133
D L EL+ + IE+ P+VA ++G ALGG LELA+GCH R+A+P+ LGL
Sbjct: 71 GSDQDAGL-----AELI-DRIENAPVPVVALLDGAALGGALELALGCHYRLASPRASLGL 124
Query: 134 PELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVS 190
PE+ LG++PG TQRLPRLVG A+EM+L + + E + L DA++++++ L+ +
Sbjct: 125 PEIKLGLLPGAGGTQRLPRLVGARHAVEMVLGGEPVGGETALRCKLADALLSADDTLEQA 184
Query: 191 RLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 250
W R P + R L +L+ A +A P +
Sbjct: 185 LAWM-----RNAPGGLARRRVASLPALAPASIAEAA---RAAAIRPVGSAAAREAALACL 236
Query: 251 GIVHGGY-SGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 309
G + +G E + F L +R L + FFA+R +V+ R + +VA
Sbjct: 237 AAAQGPFDAGRALERESFARLRDGAEARALRYAFFAERPRPPAGDVS-----ARRIEQVA 291
Query: 310 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 369
V+G G MG+GI + V+ +V+++ L +G + + L R +LT +A
Sbjct: 292 VVGAGTMGTGIVICLADAGLPVIWHDVDADRLAQGRAQVCQHFERLAARKRLTSRQAEQR 351
Query: 370 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 429
+ + + + D+ IEAV E + +K +F EL++ P IL TNTST+D++ +
Sbjct: 352 VAAVATTGEMAGIARADLAIEAVFEDMAVKCAVFRELDRVLKPGAILGTNTSTLDVDRIA 411
Query: 430 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 489
T ++G HFFSPA MPLLEIVR T A V+ + + ++K VV G C GF
Sbjct: 412 HSTRRPQDVVGLHFFSPAPAMPLLEIVRGAATHADVVAAAQGLARRLRKTAVVAGVCDGF 471
Query: 490 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDK 549
NR + Y + A L+V G +D+A+R +G +GPFQ+ DLAG V +
Sbjct: 472 IGNRMWHQYLRQAALMVHEGAMPMEVDAALRDWGFAMGPFQVADLAGLDVGDSIRLRQRS 531
Query: 550 AFPDRSFQSPLVDLLLKSGRNGKANGKGLYTY-EKGSKPKPDPSVLPIIEECRRLSNIMP 608
P R + L D + +GR G G G++ Y + G +P+ D V +I R + +
Sbjct: 532 EMPHRPWPDWL-DRVSAAGRLGLKGGSGIHAYPDGGRQPRRDAEVEAMIAAASREAGV-- 588
Query: 609 GGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWA 668
++ EIVE L +V E+ R+LEEGI A+D+D + G FP +RGG A
Sbjct: 589 --SRRAIAADEIVERCLHALVVEAARLLEEGIAASATDVDAVFLAGYGFPRWRGGPCHSA 646
Query: 669 DAVGANYVYTSLKKWSQLYG-NFFKPSRFLEERATKG 704
DA+G V L++ + F++P L A G
Sbjct: 647 DAMGLPAVVAGLRRRAATAEPEFWQPPGLLARLAAHG 683
>gi|423199920|ref|ZP_17186500.1| fatty oxidation complex, alpha subunit FadJ [Aeromonas veronii
AER39]
gi|404621145|gb|EKB18035.1| fatty oxidation complex, alpha subunit FadJ [Aeromonas veronii
AER39]
Length = 716
Score = 342 bits (876), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 246/732 (33%), Positives = 374/732 (51%), Gaps = 51/732 (6%)
Query: 1 MAAPRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVLT-GN 57
M+A +++V DG+ I+T+ P +N L V ++ E D+ +V+T G
Sbjct: 2 MSAKTFSLDVRKDGIGILTMDVPGESMNTLKAAFVEEIRTVLAEVKRNKDLIGLVITSGK 61
Query: 58 GGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELA 117
F G DI + A D + E+ IE P++AA+ G LGGGLELA
Sbjct: 62 KDSFIAGADITMLAACTSAKDAETLSREGQEIFAE-IEGLTIPVIAAIHGPCLGGGLELA 120
Query: 118 MGCHARIAAP--KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGW 172
+ CH R+ K+ LGLPE+ LG++PG TQRLPRL+G++KA+++ML K + +++
Sbjct: 121 LACHGRVVTDHGKSVLGLPEVQLGLLPGSGGTQRLPRLIGVAKALDLMLTGKQVRAKQAK 180
Query: 173 KLGLIDAVVTSEELLKVSRLWALDIAARRKP---WIRSLH----RTDKLGSLSEAREVL- 224
KLGL+D VV LL A+ +A + KP R L T+KLG R+VL
Sbjct: 181 KLGLVDDVVPPSILLDA----AIKLAKKGKPRHQLKRDLQGKVLETNKLG-----RKVLF 231
Query: 225 -KLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVF 283
+ ++ KT N P + L+V+ G+ G +G+ E++ F ELVM S L +F
Sbjct: 232 DQASKGVKAKTRGNYPAPERILEVVRIGVEEGMKAGLAAESRHFGELVMTAESAALRSIF 291
Query: 284 FAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLL 342
FA K VT G +PR V AV+GGGLMG GIA + V +K+V S +
Sbjct: 292 FATTEMKK--EVTYQGAEPRKVAHAAVLGGGLMGGGIAFVTATKAGVPVRIKDVASAGIG 349
Query: 343 KGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKI 402
++ + + R + + + + ML G LDYS F VDMV+EAV E + LK ++
Sbjct: 350 NAMRYSYDILAKKLKRRHILRSELEKQMSMLTGTLDYSGFHRVDMVVEAVFEDLNLKHQM 409
Query: 403 FSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTS 462
++E+ C H + A+NTS++ +N + + + +R++G H+FSP MPL EI+ TS
Sbjct: 410 VKDVERECGEHTVFASNTSSLPINQIAAEAAHPERVVGLHYFSPVDKMPLAEIIPHAGTS 469
Query: 463 AQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSF 522
A+ + + + K P+VV + GF VNR PY A LV G V +DSA+ F
Sbjct: 470 AETVATTLAFARAQGKTPIVVKDEAGFYVNRILAPYMNEAARLVLEGEPVEVLDSALLDF 529
Query: 523 GLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP-LVDLLLKSGRNGKANGKGLYTY 581
G P+GP LLD G V A S +K FQ+P D LL++ R G+ NGKG Y Y
Sbjct: 530 GFPVGPITLLDEVGIDVGAKISPILEKELGGEQFQAPKAFDKLLQNDRKGRKNGKGFYLY 589
Query: 582 EKGS----------KPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNE 631
K + K D SV ++ I P K + +EI E + ++NE
Sbjct: 590 GKAAPRNKLTGKEGKKTVDESVYGVL-------GIKPSAK---LARQEIAERCVLLMLNE 639
Query: 632 SCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFF 691
+ L+ G+V A D D ++ G+ FP + GG + D +G +++ L+ + + +G+ F
Sbjct: 640 AAMALDSGVVASARDGDIGAIFGIGFPPFLGGPFRYMDTLGIDHLVGRLEYYQKRHGDRF 699
Query: 692 KPSRFLEERATK 703
P L+ A +
Sbjct: 700 APCARLKAMAAE 711
>gi|423206560|ref|ZP_17193116.1| fatty oxidation complex, alpha subunit FadJ [Aeromonas veronii
AMC34]
gi|404622112|gb|EKB18977.1| fatty oxidation complex, alpha subunit FadJ [Aeromonas veronii
AMC34]
Length = 716
Score = 342 bits (876), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 246/729 (33%), Positives = 371/729 (50%), Gaps = 45/729 (6%)
Query: 1 MAAPRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVLT-GN 57
M+A +++V DG+ I+T+ P +N L V ++ E D+ +V+T G
Sbjct: 2 MSAKTFSLDVRKDGIGILTMDVPGESMNTLKAAFVEEIRSVLAEVKRNKDLIGLVITSGK 61
Query: 58 GGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELA 117
F G DI + A D + E+ IE P++AA+ G LGGGLELA
Sbjct: 62 KDSFIAGADITMLAACTSAKDAETLSREGQEIFAE-IEGLTIPVIAAIHGPCLGGGLELA 120
Query: 118 MGCHARIAAP--KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGW 172
+ CH R+ KT LGLPE+ LG++PG TQRLPRL+G++KA+++ML K + +++
Sbjct: 121 LACHGRVVTDHGKTVLGLPEVQLGLLPGSGGTQRLPRLIGVAKALDLMLTGKQVRAKQAK 180
Query: 173 KLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREV-LKLARLQA 231
KLGL+D VV LL A+ +A + KP R + D G L E ++ K+ QA
Sbjct: 181 KLGLVDDVVPPSILLDA----AIKLAKKGKP--RHELKRDLQGKLLETNKLGRKVLFDQA 234
Query: 232 KK-----TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQ 286
+K T N P + LDV+ G+ G +G+ E++ F ELVM S L +FFA
Sbjct: 235 RKGVMSKTRGNYPAPERILDVVRIGVEEGMQAGLAAESRHFGELVMTAESAALRSIFFAT 294
Query: 287 RATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGI 345
K VT G +PR V AV+GGGLMG GIA + V +K+V S + +
Sbjct: 295 TEMKK--EVTYQGAEPRKVGHAAVLGGGLMGGGIAFVTATKAGVPVRIKDVASAGIGNAM 352
Query: 346 KTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSE 405
+ + + R + + + + +L G LDYS F VDMV+EAV E + LK ++ +
Sbjct: 353 RYSYDILAKKLKRRHILRSELEKQMSLLTGTLDYSGFHRVDMVVEAVFEDLALKHQMVKD 412
Query: 406 LEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQV 465
+E+ C H + A+NTS++ +N + + + +R++G H+FSP MPL EI+ TSA+
Sbjct: 413 VERECGEHTVFASNTSSLPINQIAAEAAHPERVVGLHYFSPVDKMPLAEIIPHAGTSAET 472
Query: 466 ILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLP 525
+ + + K P+VV + GF VNR PY A LV G V +DSA+ FG P
Sbjct: 473 VATTLAFARAQGKTPIVVKDEAGFYVNRILAPYMNEAARLVLEGEPVEVLDSALLDFGFP 532
Query: 526 IGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP-LVDLLLKSGRNGKANGKGLYTYEKG 584
+GP LLD G V A S +K FQ+P D LL+ R G+ NGKG Y Y K
Sbjct: 533 VGPITLLDEVGIDVGAKISPILEKELGGEQFQAPKAFDKLLQDDRKGRKNGKGFYLYGKA 592
Query: 585 S----------KPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCR 634
+ K D SV ++ I P K + +EI E + ++NE+
Sbjct: 593 APRNKLTGKEGKKTVDESVYGVL-------GIKPSAK---LARQEIAERCVLLMLNEAAM 642
Query: 635 VLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPS 694
L+ G+V A D D ++ G+ FP GG + D +G +++ L+ + + +G+ F P
Sbjct: 643 ALDSGVVASARDGDIGAIFGIGFPPSLGGPFRYMDKLGIDHLVGRLEYYQKRHGDRFAPC 702
Query: 695 RFLEERATK 703
L+ A +
Sbjct: 703 ARLKAMAAE 711
>gi|24113713|ref|NP_708223.1| multifunctional fatty acid oxidation complex subunit alpha
[Shigella flexneri 2a str. 301]
gi|30063762|ref|NP_837933.1| multifunctional fatty acid oxidation complex subunit alpha
[Shigella flexneri 2a str. 2457T]
gi|74312856|ref|YP_311275.1| multifunctional fatty acid oxidation complex subunit alpha
[Shigella sonnei Ss046]
gi|383179315|ref|YP_005457320.1| multifunctional fatty acid oxidation complex subunit alpha
[Shigella sonnei 53G]
gi|384543995|ref|YP_005728058.1| Fatty acid oxidation complex subunit alpha [Shigella flexneri
2002017]
gi|414576963|ref|ZP_11434145.1| fatty oxidation complex, alpha subunit FadJ [Shigella sonnei
3233-85]
gi|415844373|ref|ZP_11524115.1| fatty oxidation complex, alpha subunit FadJ [Shigella sonnei 53G]
gi|415853520|ref|ZP_11529496.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri 2a
str. 2457T]
gi|417713399|ref|ZP_12362365.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
K-272]
gi|417718240|ref|ZP_12367138.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
K-227]
gi|417723955|ref|ZP_12372759.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
K-304]
gi|417729271|ref|ZP_12377969.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
K-671]
gi|417734462|ref|ZP_12383113.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
2747-71]
gi|417744224|ref|ZP_12392750.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
2930-71]
gi|418257334|ref|ZP_12881002.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
6603-63]
gi|418266751|ref|ZP_12886232.1| fatty oxidation complex, alpha subunit FadJ [Shigella sonnei str.
Moseley]
gi|420321245|ref|ZP_14823074.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
2850-71]
gi|420332311|ref|ZP_14833966.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
K-1770]
gi|420342670|ref|ZP_14844143.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
K-404]
gi|420359425|ref|ZP_14860399.1| fatty oxidation complex, alpha subunit FadJ [Shigella sonnei
3226-85]
gi|81724310|sp|Q83QQ0.1|FADJ_SHIFL RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|123773483|sp|Q3YZM2.1|FADJ_SHISS RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|24052784|gb|AAN43930.1| putative enzyme [Shigella flexneri 2a str. 301]
gi|30042017|gb|AAP17743.1| putative enzyme [Shigella flexneri 2a str. 2457T]
gi|73856333|gb|AAZ89040.1| putative enzyme [Shigella sonnei Ss046]
gi|281601781|gb|ADA74765.1| Fatty acid oxidation complex subunit alpha [Shigella flexneri
2002017]
gi|313651171|gb|EFS15570.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri 2a
str. 2457T]
gi|323168485|gb|EFZ54165.1| fatty oxidation complex, alpha subunit FadJ [Shigella sonnei 53G]
gi|332755396|gb|EGJ85760.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
K-671]
gi|332756536|gb|EGJ86887.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
2747-71]
gi|332766165|gb|EGJ96375.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
2930-71]
gi|333002714|gb|EGK22274.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
K-272]
gi|333016250|gb|EGK35581.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
K-304]
gi|333016597|gb|EGK35927.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
K-227]
gi|391247766|gb|EIQ07012.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
2850-71]
gi|391250352|gb|EIQ09574.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
K-1770]
gi|391265743|gb|EIQ24710.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
K-404]
gi|391282106|gb|EIQ40743.1| fatty oxidation complex, alpha subunit FadJ [Shigella sonnei
3226-85]
gi|391284716|gb|EIQ43311.1| fatty oxidation complex, alpha subunit FadJ [Shigella sonnei
3233-85]
gi|397896956|gb|EJL13367.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
6603-63]
gi|397899576|gb|EJL15950.1| fatty oxidation complex, alpha subunit FadJ [Shigella sonnei str.
Moseley]
Length = 714
Score = 342 bits (876), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 231/715 (32%), Positives = 365/715 (51%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAIITIDVPDEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R ++E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCVDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>gi|417828770|ref|ZP_12475321.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
J1713]
gi|335574625|gb|EGM60943.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
J1713]
Length = 714
Score = 342 bits (876), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 231/715 (32%), Positives = 365/715 (51%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAIITIDVPDEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPENVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R ++E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCVDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>gi|323493352|ref|ZP_08098475.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
brasiliensis LMG 20546]
gi|323312438|gb|EGA65579.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
brasiliensis LMG 20546]
Length = 706
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 216/650 (33%), Positives = 350/650 (53%), Gaps = 25/650 (3%)
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
F G D+ + A + + + ++ L D P+VAA+ G LGGGLELA+ C
Sbjct: 66 FIAGADVRMLDACTSASEAQALAEKGQQMFQQL-SDLPYPVVAAIHGPCLGGGLELALAC 124
Query: 121 HARIAAP--KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLG 175
R+ + KT+LGLPE+ LG++PG TQRLPRL+GL +++++L K + +++ KLG
Sbjct: 125 DYRVCSDSDKTRLGLPEVQLGLLPGSGGTQRLPRLIGLLPSLDLILTGKQLRAKKAKKLG 184
Query: 176 LIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVL--KLARLQAKK 233
+ DAVV LL+V++ + + K ++ + + + R+V+ + A+ +K
Sbjct: 185 VADAVVPQTVLLEVAKSFVEKHTGKSKAKRKASTKEKLIANTGLGRKVIFDQAAKKTREK 244
Query: 234 TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 293
T N P A L+VI G+ G G KEA+ F ELVM + S+ L +FFA T+++
Sbjct: 245 TRGNYPAADAILEVIRFGLEKGFEKGQKKEAERFGELVMTNESKALRSIFFA---TTEMK 301
Query: 294 NVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEANV 352
P+ + + AV+GGGLMG+GI+ + + V +K+V+++ +L +K
Sbjct: 302 KENGSYADPKALERAAVLGGGLMGAGISHVSVAKAKVPVRIKDVSNDGVLNALKYNYKLF 361
Query: 353 RGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPP 412
R L++ + + + L G D++ F D+VIEAV E + LKQ++ +++E+
Sbjct: 362 EKQRKRRILSKAQLQSKMLQLSGGTDFTTFNHTDIVIEAVFEDLQLKQQMVADVEENAKD 421
Query: 413 HCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTV 472
I ATNTS++ ++ + EK + + ++G H+FSP MPL+E++ E TSA+ I ++
Sbjct: 422 STIFATNTSSLPIHQIAEKAARPENVVGLHYFSPVEKMPLVEVIPHEGTSAETISTVVEF 481
Query: 473 GKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLL 532
+ K P+VV +C GF VNR PY A ++ G + ++D+A+ +FG P+GP LL
Sbjct: 482 ARKQGKTPIVVKDCAGFYVNRILAPYMNEAAQVLLTGEPIEQLDTALLNFGFPVGPITLL 541
Query: 533 DLAGYGVAAATSKEFDKAFPDRSFQSPLV-DLLLKSGRNGKANGKGLYTYEKGSKPKPDP 591
D G + A +R FQ P V D LL R G+ +GKG YTY KG K + D
Sbjct: 542 DEVGVDIGAKIMPILVNELGER-FQGPDVFDKLLNDDRKGRKSGKGFYTY-KGKKKEVDK 599
Query: 592 SVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDAS 651
SV +L + P K + EK+I + P++NE+ R L+EGI+ D D +
Sbjct: 600 SVY-------KLLGLTPESK---LAEKDIAMRCVLPMLNEAVRCLDEGIIRSPRDGDIGA 649
Query: 652 VLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERA 701
+ G+ FP + GG + D +G + + +Q YG+ F P L RA
Sbjct: 650 IFGIGFPPFLGGPFRYMDQIGIKKLVEIMNDHAQKYGDRFAPCDGLLTRA 699
>gi|218705870|ref|YP_002413389.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli UMN026]
gi|293405806|ref|ZP_06649798.1| enoyl-CoA hydratase [Escherichia coli FVEC1412]
gi|298381489|ref|ZP_06991088.1| fatty acid oxidation complex subunit alpha [Escherichia coli
FVEC1302]
gi|300897024|ref|ZP_07115502.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
198-1]
gi|419932995|ref|ZP_14450269.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli 576-1]
gi|422335646|ref|ZP_16416641.1| fatty acid oxidation complex subunit alpha [Escherichia coli
4_1_47FAA]
gi|432354281|ref|ZP_19597554.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE2]
gi|432402632|ref|ZP_19645384.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE26]
gi|432426897|ref|ZP_19669397.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE181]
gi|432461362|ref|ZP_19703511.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE204]
gi|432476587|ref|ZP_19718585.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE208]
gi|432518411|ref|ZP_19755599.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE228]
gi|432538533|ref|ZP_19775435.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE235]
gi|432632127|ref|ZP_19868053.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE80]
gi|432641842|ref|ZP_19877676.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE83]
gi|432666737|ref|ZP_19902318.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE116]
gi|432771308|ref|ZP_20005643.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE50]
gi|432775433|ref|ZP_20009704.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE54]
gi|432887322|ref|ZP_20101396.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE158]
gi|432913520|ref|ZP_20119217.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE190]
gi|432962570|ref|ZP_20152163.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE202]
gi|433019415|ref|ZP_20207630.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE105]
gi|433053948|ref|ZP_20241127.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE122]
gi|433063804|ref|ZP_20250725.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE125]
gi|433068653|ref|ZP_20255442.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE128]
gi|433159385|ref|ZP_20344222.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE177]
gi|433179198|ref|ZP_20363596.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE82]
gi|254788655|sp|B7N5V2.1|FADJ_ECOLU RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|218432967|emb|CAR13861.1| fused enoyl-CoA hydratase and epimerase and isomerase ;
3-hydroxyacyl-CoA dehydrogenase [Escherichia coli
UMN026]
gi|291428014|gb|EFF01041.1| enoyl-CoA hydratase [Escherichia coli FVEC1412]
gi|298278931|gb|EFI20445.1| fatty acid oxidation complex subunit alpha [Escherichia coli
FVEC1302]
gi|300359151|gb|EFJ75021.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
198-1]
gi|373243298|gb|EHP62809.1| fatty acid oxidation complex subunit alpha [Escherichia coli
4_1_47FAA]
gi|388414793|gb|EIL74740.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli 576-1]
gi|430875454|gb|ELB98996.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE2]
gi|430925103|gb|ELC45776.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE26]
gi|430955150|gb|ELC73942.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE181]
gi|430989052|gb|ELD05521.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE204]
gi|431005203|gb|ELD20411.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE208]
gi|431051033|gb|ELD60709.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE228]
gi|431069422|gb|ELD77751.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE235]
gi|431170327|gb|ELE70521.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE80]
gi|431181725|gb|ELE81587.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE83]
gi|431201031|gb|ELE99749.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE116]
gi|431314099|gb|ELG02052.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE50]
gi|431318045|gb|ELG05814.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE54]
gi|431416320|gb|ELG98807.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE158]
gi|431439820|gb|ELH21153.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE190]
gi|431473834|gb|ELH53666.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE202]
gi|431530892|gb|ELI07568.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE105]
gi|431570020|gb|ELI42949.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE122]
gi|431581123|gb|ELI53577.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE125]
gi|431583725|gb|ELI55720.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE128]
gi|431677617|gb|ELJ43692.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE177]
gi|431700844|gb|ELJ65772.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE82]
Length = 714
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 229/713 (32%), Positives = 365/713 (51%), Gaps = 33/713 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPVPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 MCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPQSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDRQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDAS 651
++ P+I G+ ++ ++ E + ++NE+ R L+E ++ D D +
Sbjct: 600 AIYPLI-------GTQGQGR---LSAPQVAERCVMLMLNEAVRCLDEQVIRSVRDGDIGA 649
Query: 652 VLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
V G+ FP + GG + D++GA V +++ + YG+ F P L E + +G
Sbjct: 650 VFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMSKRG 702
>gi|359792454|ref|ZP_09295269.1| 3-hydroxyacyl-CoA dehydrogenase [Mesorhizobium alhagi CCNWXJ12-2]
gi|359251458|gb|EHK54813.1| 3-hydroxyacyl-CoA dehydrogenase [Mesorhizobium alhagi CCNWXJ12-2]
Length = 713
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 227/690 (32%), Positives = 350/690 (50%), Gaps = 39/690 (5%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A++++ NPPVNAL+ ++ GL F+ +++ G F G DI +F
Sbjct: 21 LAVLSIDNPPVNALSRSVIEGLIAGFDLFEKDGSADGLIIRCAGRTFVAGGDIALFDN-- 78
Query: 75 GAGDVSLMPDVSVE---LVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
P S E +++ I +P+V + G LGGGLELA+ CH RIAA T
Sbjct: 79 --------PAFSAEPLNALLDRIAASSRPVVGVLFGTVLGGGLELALACHGRIAAEGTAF 130
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
G+PE+ LG+IPG TQRLPRLVGL++A M+ ++I +E+ ++GLID + +
Sbjct: 131 GMPEIRLGLIPGSHGTQRLPRLVGLAEAARMISTGEAIGTEKALEIGLIDRIADPMDGAA 190
Query: 189 VSRLWALDIAARRKPWIRSLH-RTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDV 247
++ +A+R +P L R D+ EVL R A P P ++A +
Sbjct: 191 IADFVGY-VASRGRPEPAPLQGRADQ--------EVLDGLRKTAAGK-PQEPAYRAVAEA 240
Query: 248 IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRK 307
+ I G EA F LV +R H+FFA+RA + +P++ R V +
Sbjct: 241 LAAAIERPFAEGAAIEADWFARLVPSVPARAQRHLFFAERAAASIPDLPKES-PTRSVEQ 299
Query: 308 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 367
V ++G G MG+GIA + L V+L + + + + + + V RG+L+ + A
Sbjct: 300 VGILGAGTMGTGIALSFALAGFEVILSDTEQSAIDRAFEGLSDALGAFVRRGRLSDEAAK 359
Query: 368 NALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 427
L ++G + + D+V+EAV E + LK + EL C P I+ATNTST+D+N
Sbjct: 360 TTLARIEGAVGAAALASSDLVVEAVFEDMELKLAVARELGSLCNPGAIIATNTSTLDVNA 419
Query: 428 VGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 487
+ T +IG HFFSPAH+M LLE+VR + T+ V+ ++ + I K VV G C
Sbjct: 420 IAAATGRPGDVIGTHFFSPAHIMRLLEVVRGKSTAPDVLQTILRTARRIGKTVVVSGVCY 479
Query: 488 GFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRS---FGLPIGPFQLLDLAGYGVAAATS 544
GF NR Y + + + G ID I G+ +GP ++LD+AG V A T
Sbjct: 480 GFIGNRMAEVYMRESEAMQLEGASPQDIDRVIEDPAFLGMSMGPSRMLDMAGVDVGARTV 539
Query: 545 KEF--DKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYE-KGSKPKPDPSVLPIIEECR 601
E+ A P L + ++GR+G+ +G G Y YE + + P PD S L C
Sbjct: 540 IEWVASGAGPRDPAYRALCRRMYETGRHGQKSGLGYYLYEGRKALPDPDHSAL-----CT 594
Query: 602 RLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYR 661
L+ + + E+EI E + FP+VNE+ +LEE I R SD+D A G FP +R
Sbjct: 595 GLAAELGIARRKHFPEEEIFERLFFPMVNEAALILEEKIAYRGSDIDVAWTSGYGFPRWR 654
Query: 662 GGIVFWADAVGANYVYTSLKKWSQLYGNFF 691
GG +F AD +G + T ++ ++ G+ +
Sbjct: 655 GGPLFMADEIGLARIVTGMEHYAARGGDPY 684
>gi|417708387|ref|ZP_12357420.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
VA-6]
gi|420364044|ref|ZP_14864927.1| fatty oxidation complex, alpha subunit FadJ [Shigella sonnei
4822-66]
gi|333001487|gb|EGK21055.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
VA-6]
gi|391293707|gb|EIQ51966.1| fatty oxidation complex, alpha subunit FadJ [Shigella sonnei
4822-66]
Length = 712
Score = 341 bits (875), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 231/715 (32%), Positives = 365/715 (51%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 6 TLNVRLDNIAIITIDVPDEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 65
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 66 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 124
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 125 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 184
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 185 DVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 240
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 241 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 299
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 300 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 358
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 359 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 418
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 419 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 478
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 479 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 538
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 539 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 597
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R ++E ++ D D
Sbjct: 598 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCVDEQVIRSVRDGDI 645
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 646 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 700
>gi|193069764|ref|ZP_03050715.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
E110019]
gi|415815346|ref|ZP_11506866.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
LT-68]
gi|419950639|ref|ZP_14466850.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli CUMT8]
gi|432968440|ref|ZP_20157355.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE203]
gi|192956966|gb|EDV87418.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
E110019]
gi|323170387|gb|EFZ56040.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
LT-68]
gi|388416470|gb|EIL76357.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli CUMT8]
gi|431471557|gb|ELH51450.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE203]
Length = 714
Score = 341 bits (875), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 230/715 (32%), Positives = 364/715 (50%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R ++E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCVDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>gi|291283581|ref|YP_003500399.1| Fatty oxidation complex, alpha subunit FadJ [Escherichia coli
O55:H7 str. CB9615]
gi|387507726|ref|YP_006159982.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O55:H7 str. RM12579]
gi|416819946|ref|ZP_11893533.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O55:H7 str. USDA 5905]
gi|419115736|ref|ZP_13660753.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC5A]
gi|419126908|ref|ZP_13671793.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC5C]
gi|419137401|ref|ZP_13682197.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC5E]
gi|425250062|ref|ZP_18643011.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli 5905]
gi|209764654|gb|ACI80639.1| putative enzyme [Escherichia coli]
gi|290763454|gb|ADD57415.1| Fatty oxidation complex, alpha subunit FadJ [Escherichia coli
O55:H7 str. CB9615]
gi|320662940|gb|EFX30264.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O55:H7 str. USDA 5905]
gi|374359720|gb|AEZ41427.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O55:H7 str. RM12579]
gi|377960330|gb|EHV23814.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC5A]
gi|377975020|gb|EHV38345.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC5C]
gi|377984394|gb|EHV47629.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC5E]
gi|408163920|gb|EKH91767.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli 5905]
Length = 714
Score = 341 bits (875), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 231/715 (32%), Positives = 364/715 (50%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA I V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP +PL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKIPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVAHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R ++E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCVDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>gi|419132366|ref|ZP_13677203.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC5D]
gi|377975329|gb|EHV38650.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC5D]
Length = 712
Score = 341 bits (875), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 231/715 (32%), Positives = 364/715 (50%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 6 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 65
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 66 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 124
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 125 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 184
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 185 DVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 240
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 241 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 299
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA I V +K++N + + +K + G V
Sbjct: 300 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDINPQGINHALKYSWDQLEGKV 358
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 359 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 418
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP +PL+EI+ TSAQ I + + K
Sbjct: 419 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKIPLVEIIPHAGTSAQTIATTVKLAKKQ 478
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 479 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVAHIDAALVKFGFPVGPIQLLDEVG 538
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 539 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 597
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R ++E ++ D D
Sbjct: 598 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCVDEQVIRSVRDGDI 645
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 646 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 700
>gi|432675446|ref|ZP_19910905.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE142]
gi|431213981|gb|ELF11836.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE142]
Length = 714
Score = 341 bits (875), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 230/715 (32%), Positives = 364/715 (50%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTKHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R ++E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCVDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>gi|110806304|ref|YP_689824.1| multifunctional fatty acid oxidation complex subunit alpha
[Shigella flexneri 5 str. 8401]
gi|424838703|ref|ZP_18263340.1| multifunctional fatty acid oxidation complex subunit alpha
[Shigella flexneri 5a str. M90T]
gi|123048046|sp|Q0T2E6.1|FADJ_SHIF8 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|110615852|gb|ABF04519.1| putative enzyme [Shigella flexneri 5 str. 8401]
gi|383467755|gb|EID62776.1| multifunctional fatty acid oxidation complex subunit alpha
[Shigella flexneri 5a str. M90T]
Length = 714
Score = 341 bits (875), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 231/715 (32%), Positives = 365/715 (51%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAIITIDVPDEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-INALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R ++E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCVDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>gi|410631340|ref|ZP_11342017.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola arctica BSs20135]
gi|410149163|dbj|GAC18884.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola arctica BSs20135]
Length = 714
Score = 341 bits (875), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 243/715 (33%), Positives = 370/715 (51%), Gaps = 36/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V +DGVAI+++ P +N L + + E+ + +K +V ++G F
Sbjct: 15 TLNVRDDGVAILSMDVPGESMNTLKVEFAEQIDAVLEQIKADSSIKGVVVISGKENSFVA 74
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DI++ A D + + ++ IED VAA+ G ALGGGLELA+ CH R
Sbjct: 75 GADISMLAACGSAEDATTIAKGGQDMF-QRIEDMSVTFVAAIHGPALGGGLELALACHYR 133
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ + KTQLGLPE+ LG++PG TQRLP+L+ + +A++MML S+ +++ K G++D
Sbjct: 134 VCSDDAKTQLGLPEVQLGLLPGSGGTQRLPKLISVQQAMKMMLTGASVRAKQAKKYGIVD 193
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREV-----LKLARLQ-AK 232
+V LL V A+++A + KP R+ + D +G E V AR Q A
Sbjct: 194 DMVPQSILLDV----AIEMAKKPKPK-RNGPKLDLMGKFLENTSVGRNLMFNQARKQTAS 248
Query: 233 KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 292
KT N P + +D IE G+ G G+ EAK F LVM S L +FFA K
Sbjct: 249 KTQGNYPSPELIIDCIETGLSQGFRKGLEVEAKHFGNLVMSSESAALRSLFFATTDMKKE 308
Query: 293 PNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEAN 351
V G++P ++KV V+GGGLMG GIA + +K++ SE + IK
Sbjct: 309 TGVQ--GVQPARLKKVGVLGGGLMGGGIAFVTATKAGLPARIKDIRSEGIANAIKYSFDI 366
Query: 352 VRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACP 411
+ V RG + + + +L G +DYS F D D+VIEAV E + LKQ + +E+E+ C
Sbjct: 367 LNKKVKRGFMQKMAMQKQMALLTGSIDYSGFSDADVVIEAVFEDLTLKQNMVAEVEENCA 426
Query: 412 PHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMT 471
H I A+NTS+I ++ + K +++IG H+FSP MPL E++ E+TS Q I +
Sbjct: 427 EHTIFASNTSSIPISQIAAKAKRPEQVIGLHYFSPVDKMPLAEVIAHEKTSDQTISTTVE 486
Query: 472 VGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQL 531
+ K K P+VV + GF VNR PY A ++ G + ID ++ FG P+GP +L
Sbjct: 487 LAKKQGKTPIVVKDGAGFYVNRILAPYMNEAAEVLLSGEPIDHIDKSLVKFGFPVGPVKL 546
Query: 532 LDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKP--KP 589
LD G V F DR +P D +L R GK N +G Y Y G P +
Sbjct: 547 LDEVGIDVGTKIGPILQAQFGDRFASNPGFDKILADDRKGKKNKRGFYDYS-GKNPGKEV 605
Query: 590 DPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
D SV ++ I P K ++ ++I E + ++NE+ L+EG+V A D D
Sbjct: 606 DASVYTLL-------GITPASK---MSHEQIAERCVLLMLNEAAMCLDEGVVRNARDGDI 655
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
++ G+ FP + GG + +G +V L+ + L G+ F P+ L++ +G
Sbjct: 656 GAIFGIGFPPFLGGPFRYMHTLGITHVVARLEHYQGLLGDKFTPAESLKKMVEEG 710
>gi|121605036|ref|YP_982365.1| 3-hydroxyacyl-CoA dehydrogenase [Polaromonas naphthalenivorans CJ2]
gi|120594005|gb|ABM37444.1| 3-hydroxyacyl-CoA dehydrogenase [Polaromonas naphthalenivorans CJ2]
Length = 686
Score = 341 bits (875), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 238/695 (34%), Positives = 362/695 (52%), Gaps = 40/695 (5%)
Query: 7 TMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFD 66
T ++G+ V +I + NPP+NA ++ + GL ++ ++ D+ A V+ G G F G D
Sbjct: 11 TEQIGD--VLLIEINNPPINAGSLTVRQGLTAAIQQLQAQADLVAGVIIGGGTTFVAGSD 68
Query: 67 INVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA 126
+ F + + D + V+ LIE C KP+VAA+ G ALGGGLELA+ C ARIA
Sbjct: 69 LREFGQP--------LQDPQMPAVIALIEACSKPVVAALHGAALGGGLELALACDARIAL 120
Query: 127 PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS 183
T LGLPE+TLG+IPG TQRLPR VG+++AIEM+ + IT+++ L LID VV
Sbjct: 121 AGTLLGLPEVTLGIIPGAGGTQRLPRRVGVARAIEMICSGERITADKALALRLIDEVVAG 180
Query: 184 EELLKVSRLWALDIAARRKPWIRSLH-RTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQ 242
+ L+ + A RK IR T+ ++ +A + L+A K P +
Sbjct: 181 D--LQAHAMALARRLAGRKCRIRDEQVPTEDAAAIEQAEQTA----LRAGKRRPAVLAAI 234
Query: 243 ACLDV-----IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 297
A + I+EG+ +E VF++L + + L H FFA+R +K+P
Sbjct: 235 AAVKNAARLPIDEGLA--------QERAVFQQLRVSTEAYALRHQFFAEREAAKLPAA-- 284
Query: 298 IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 357
+ PR V+ VAVIG G MG+GIA + + V+L E + L +G + + + + V
Sbjct: 285 LQAAPRPVQTVAVIGAGTMGAGIAICALDAGLNVILLEQDDVALQRGQQRVAEHYQSRVA 344
Query: 358 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 417
GK+ A + L D+ + D+VIEAV E +P+KQ +F +++ +LA
Sbjct: 345 AGKVKAAVAAASQARLSPTTDWVQLGRADLVIEAVFEDMPVKQDVFRKIDAHARSGAVLA 404
Query: 418 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 477
TNTS +D++ + + T+ ++G HFFSPA+VM LLE+VR ERT+A V+ M +GK +K
Sbjct: 405 TNTSYLDVDAIAQLTARPQDVLGLHFFSPANVMKLLEVVRGERTAADVVATGMALGKKLK 464
Query: 478 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGY 537
K+PV+ GN GF N + Y + ++ G +D A+ G +GPF + DL+G
Sbjct: 465 KLPVLCGNAFGFIGNCIYNAYRKQCEFMLEDGAWPEAVDQALTDLGFAMGPFAVADLSGL 524
Query: 538 GVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKP-DPSVLPI 596
+A K + R ++D L + GR G+ G G Y Y G + K D V I
Sbjct: 525 DIAWRMRKAQAASRDPRERYVGILDQLCEQGRLGRKTGAGYYRYPDGKQVKATDAIVRAI 584
Query: 597 IEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMS 656
IE+ I ++ EI L +VNE+ +L EG+ R SD+D V G
Sbjct: 585 IEQASSQRGITRR----TLDATEIQRRALLAMVNEAALLLAEGVASRPSDIDVVLVQGYG 640
Query: 657 FPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFF 691
FP + GG VFWA + L++ + G+ F
Sbjct: 641 FPRWEGGPVFWARQQDPAQLAQDLQRLAGESGHGF 675
>gi|416898407|ref|ZP_11927971.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
STEC_7v]
gi|417115680|ref|ZP_11966816.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
1.2741]
gi|422799647|ref|ZP_16848146.1| fatty oxidation complex [Escherichia coli M863]
gi|323967782|gb|EGB63194.1| fatty oxidation complex [Escherichia coli M863]
gi|327252611|gb|EGE64270.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
STEC_7v]
gi|386141099|gb|EIG82251.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
1.2741]
Length = 714
Score = 341 bits (874), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 234/715 (32%), Positives = 368/715 (51%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRTIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEELARQGQQLMAE-IHALPVPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ + PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ +KLGL+D
Sbjct: 127 VCSDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQAFKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + + R L +++ G L A + + +KT
Sbjct: 187 DVVPHSILLE----SAVELAKQDRLSSRPLPVRERILAGPLGRALLFKMVGKKTEQKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+VIE G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATKRILEVIETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQK+ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQKMVAEVEENCATHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ ++ + S +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPISDIAAHASRPEQVIGLHFFSPVEKMPLVEIIPHTGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGPKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R L+E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMMMLNEAVRCLDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + DA+GA V +++ + YG+ F P L E + +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDALGAAEVVAIMQRLTARYGSRFTPCDRLVEMSERG 702
>gi|387608028|ref|YP_006096884.1| fatty acid oxidation complex alpha subunit [includes: enoyl-CoA
hydratase; 3-hydroxyacyl-CoA dehydrogenase;
3-hydroxybutyryl-CoA epimerase] [Escherichia coli 042]
gi|284922328|emb|CBG35413.1| fatty acid oxidation complex alpha subunit [includes: enoyl-CoA
hydratase; 3-hydroxyacyl-CoA dehydrogenase;
3-hydroxybutyryl-CoA epimerase] [Escherichia coli 042]
Length = 714
Score = 341 bits (874), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 229/713 (32%), Positives = 365/713 (51%), Gaps = 33/713 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPVPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATECILVVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDRQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDAS 651
++ P+I G+ ++ ++ E + ++NE+ R L+E ++ D D +
Sbjct: 600 AIYPLI-------GTQGQGR---LSAPQVAERCVMLMLNEAVRCLDEQVIRSVRDGDIGA 649
Query: 652 VLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
V G+ FP + GG + D++GA V +++ + YG+ F P L E + +G
Sbjct: 650 VFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMSKRG 702
>gi|432851859|ref|ZP_20082015.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE144]
gi|431399648|gb|ELG83047.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE144]
Length = 714
Score = 341 bits (874), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 228/713 (31%), Positives = 365/713 (51%), Gaps = 33/713 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIANCKTAQEAEALARQGQQLMAE-IHALPVPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 MCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPQSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHFKASERDRQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVTEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDAS 651
++ P+I G+ ++ ++ E + ++NE+ R L+E ++ D D +
Sbjct: 600 AIYPLI-------GTQGQGR---LSAPQVAERCVMLMLNEAVRCLDEQVIRSVRDGDIGA 649
Query: 652 VLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
V G+ FP + GG + D++GA V +++ + YG+ F P L E + +G
Sbjct: 650 VFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMSKRG 702
>gi|432392856|ref|ZP_19635686.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE21]
gi|430918012|gb|ELC39051.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE21]
Length = 714
Score = 341 bits (874), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 229/713 (32%), Positives = 366/713 (51%), Gaps = 33/713 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIANCKTAQEAEALARQGQQLMAE-IHALPVPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 MCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPQSILLEA----AVELAKQGRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQTLRSIFFASTEVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDRQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDAS 651
++ P+I G+ ++ ++ E + ++NE+ R L+E ++ D D +
Sbjct: 600 AIYPLI-------GTQGQGR---LSAPQVAERCVMLMLNEAVRCLDEQVIRSVRDGDIGA 649
Query: 652 VLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
V G+ FP + GG + D++GA V +++ + YG+ F P L E + +G
Sbjct: 650 VFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMSKRG 702
>gi|429208178|ref|ZP_19199431.1| Enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase [Rhodobacter sp. AKP1]
gi|428188779|gb|EKX57338.1| Enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase [Rhodobacter sp. AKP1]
Length = 655
Score = 341 bits (874), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 233/671 (34%), Positives = 341/671 (50%), Gaps = 51/671 (7%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+DG+A++TL NPPVNAL + + L E + + V+A+VLT G F GG DI F
Sbjct: 11 SDGIALLTLANPPVNALGLAVRQRLAALTAELEADESVRAVVLTAEGRVFVGGADIAEFD 70
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ + +PDV + IE +KP +AA+ G ALGGG ELA+GCH RI A +L
Sbjct: 71 RPP---EAPHLPDV-----IAAIEASRKPWIAALNGAALGGGAELALGCHYRIFADTARL 122
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
GLPE +LG+IPG TQRLPR +GL+ AIE++ +++++ E + GL D + E +
Sbjct: 123 GLPETSLGLIPGAGGTQRLPRRIGLAPAIEVITAGRTLSAAEAREAGLADRIAAGELI-- 180
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLA----------RLQAKKTAPNM 238
P + RT K G+L + LA R + + A
Sbjct: 181 --------------PEALAFARTLK-GALPQPSPAAPLADPGPAFWDEARTRIARAARGN 225
Query: 239 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDI 298
P A L+ I G+ G +G+ E + F L D + L H+FFA+RA + +
Sbjct: 226 PAPAAALEAIRVGVAEGFAAGLRAERETFLRLRASDEAAALRHLFFAERAALRPAALR-- 283
Query: 299 GLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTR 358
G++P + + VIGGG MGSGIA A + V L E E L G++ +EA V R
Sbjct: 284 GIEPVPLTRAGVIGGGTMGSGIAAALAAAGLEVRLTETGPESLAAGLERVEAIFEAQVKR 343
Query: 359 GKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 418
G + A + + G + D D+VIEAV E + +K+++F EL + C ILAT
Sbjct: 344 GLTDRAGAAERMARVTGTVGLGALADCDLVIEAVFEDLAVKRRVFEELVRLCGSEAILAT 403
Query: 419 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKK 478
NTS +D + E R I HFFSPA VM LLEIV T+ + + + + + K
Sbjct: 404 NTSYLDPERIVEGLPHPQRFIALHFFSPAQVMKLLEIVPMAATAPRTLATGVALAARLGK 463
Query: 479 VPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYG 538
+PV GN GF NR Y A L+ G ID A+R+FGL +GPF++ D+AG
Sbjct: 464 IPVQAGNGEGFIGNRILKRYRAEAEALLLAGATPTEIDEAMRAFGLGMGPFEMQDMAGLD 523
Query: 539 VAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPII 597
+A + D + P D L+++GR G+ +G G Y Y GS+ P+P P +I
Sbjct: 524 IAFRAREAARALGQDLP-EGP-GDRLVRAGRLGRKSGGGWYDYAPGSRLPQPSPEAAALI 581
Query: 598 EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSF 657
+ PG +P + EI + ++ + E R+ +EG+ SD+D V G F
Sbjct: 582 APL-----VTPGPRP---SGTEIADRLITAMAEEGQRICDEGLAQSPSDIDLVEVHGYGF 633
Query: 658 PSYRGGIVFWA 668
P ++GG +F A
Sbjct: 634 PRHKGGPMFHA 644
>gi|417192133|ref|ZP_12014233.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
4.0522]
gi|386191015|gb|EIH79761.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
4.0522]
Length = 714
Score = 341 bits (874), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 231/715 (32%), Positives = 364/715 (50%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R ++E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCVDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V ++ + YG+ F P L E +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQPLATQYGSRFTPCERLVEMGARG 702
>gi|300928514|ref|ZP_07144040.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
187-1]
gi|300463509|gb|EFK27002.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
187-1]
Length = 714
Score = 341 bits (874), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 231/715 (32%), Positives = 364/715 (50%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLDGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R ++E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCVDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>gi|221369540|ref|YP_002520636.1| Short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Rhodobacter sphaeroides KD131]
gi|221162592|gb|ACM03563.1| Short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Rhodobacter sphaeroides KD131]
Length = 655
Score = 341 bits (874), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 232/671 (34%), Positives = 342/671 (50%), Gaps = 51/671 (7%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+DG+A++TL NPPVNAL + + L + + + V+A+VLT G F GG DI F
Sbjct: 11 SDGIALLTLANPPVNALGLAVRQRLAALTAQLEADESVRAVVLTAEGRVFVGGADIAEFD 70
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ + +PDV + IE +KP +AA+ G ALGGG ELA+GCH RI A +L
Sbjct: 71 RPP---EAPHLPDV-----IAAIEASRKPWIAALNGAALGGGAELALGCHYRIFADTARL 122
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
GLPE +LG+IPG TQRLPR +GL+ AIE++ +++++ E + GL D + E +
Sbjct: 123 GLPETSLGLIPGAGGTQRLPRRIGLAPAIEVITAGRTLSAAEAREAGLADRIAAGELI-- 180
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLA----------RLQAKKTAPNM 238
P + RT K G+L + LA R + + A
Sbjct: 181 --------------PEALAFARTLK-GALPQPSPAAPLADPGPAFWDEARARIARAARGN 225
Query: 239 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDI 298
P A L+ I G+ G +G+ E + F L D + L H+FFA+RA + +
Sbjct: 226 PAPAAALEAIRVGVAEGFAAGLRAERETFLRLRASDEAAALRHLFFAERAALRPAALR-- 283
Query: 299 GLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTR 358
G++P + + VIGGG MGSGIA A + V L E E L G++ +EA V R
Sbjct: 284 GIEPVPLTRAGVIGGGTMGSGIAAALAAAGLEVRLTETGPESLAAGLERVEAIFEAQVKR 343
Query: 359 GKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 418
G + A + + G + D D+VIEAV E + +K+++F EL + C ILAT
Sbjct: 344 GLTDRAGAAERMARVTGTVGLGALADCDLVIEAVFEDLAVKRRVFEELVRLCGSEAILAT 403
Query: 419 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKK 478
NTS +D + E R I HFFSPA VM LLEIV T+ + + + + + K
Sbjct: 404 NTSYLDPERIVEGLPHPQRFIALHFFSPAQVMKLLEIVPLAATAPRTLATGVALAARLGK 463
Query: 479 VPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYG 538
+PV GN GF NR Y A L+ G ID A+R+FGL +GPF++ D+AG
Sbjct: 464 IPVQAGNGEGFIGNRILKRYRAEAEALLLAGATPTEIDEAMRAFGLGMGPFEMQDMAGLD 523
Query: 539 VAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPII 597
+A + D + P D L+++GR G+ +G G Y Y +GS+ P+P P +I
Sbjct: 524 IAFRAREAARALGQDLP-EGP-GDRLVRAGRLGRKSGGGWYDYARGSRLPQPSPEAAALI 581
Query: 598 EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSF 657
+ PG +P + EI + ++ + E R+ +EG+ SD+D V G F
Sbjct: 582 APL-----VTPGPRP---SGTEIADRLIAAMAEEGQRICDEGLAQSPSDIDLVEVHGYGF 633
Query: 658 PSYRGGIVFWA 668
P ++GG +F A
Sbjct: 634 PRHKGGPMFHA 644
>gi|419402810|ref|ZP_13943534.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC15C]
gi|378247344|gb|EHY07263.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC15C]
Length = 711
Score = 341 bits (874), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 230/715 (32%), Positives = 364/715 (50%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 6 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 65
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 66 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 124
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 125 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 184
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 185 DVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 240
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 241 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 299
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 300 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 358
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 359 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 418
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 419 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 478
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 479 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 538
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 539 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 597
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R ++E ++ D D
Sbjct: 598 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCVDEQVIRSVRDGDI 645
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 646 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 700
>gi|309784945|ref|ZP_07679578.1| fatty oxidation complex, alpha subunit FadJ [Shigella dysenteriae
1617]
gi|308927315|gb|EFP72789.1| fatty oxidation complex, alpha subunit FadJ [Shigella dysenteriae
1617]
Length = 714
Score = 341 bits (874), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 231/715 (32%), Positives = 364/715 (50%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQDQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT L LPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLSLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F ELVM S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELVMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R ++E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCVDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVIAIMQRLATQYGSRFTPCERLVEMGARG 702
>gi|422370074|ref|ZP_16450468.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
16-3]
gi|432899357|ref|ZP_20110049.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE192]
gi|433029314|ref|ZP_20217173.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE109]
gi|315298179|gb|EFU57443.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
16-3]
gi|431427009|gb|ELH09053.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE192]
gi|431543054|gb|ELI18050.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE109]
Length = 714
Score = 341 bits (874), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 231/715 (32%), Positives = 365/715 (51%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + + ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVCAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + ++ +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEVLARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQAAKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L ++FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASTEVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + +K + G V
Sbjct: 302 DAPPAPLNSAGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPRGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCATHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G + ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R L+E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCLDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E + +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCDRLVEMSERG 702
>gi|419397468|ref|ZP_13938236.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC15B]
gi|419407929|ref|ZP_13948618.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC15D]
gi|419413516|ref|ZP_13954168.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC15E]
gi|422762156|ref|ZP_16815913.1| fatty oxidation complex [Escherichia coli E1167]
gi|422777623|ref|ZP_16831275.1| fatty oxidation complex [Escherichia coli H120]
gi|432832359|ref|ZP_20065933.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE135]
gi|323944852|gb|EGB40918.1| fatty oxidation complex [Escherichia coli H120]
gi|324117782|gb|EGC11681.1| fatty oxidation complex [Escherichia coli E1167]
gi|378243589|gb|EHY03535.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC15B]
gi|378254308|gb|EHY14172.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC15D]
gi|378258948|gb|EHY18764.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC15E]
gi|431376329|gb|ELG61652.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE135]
Length = 713
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 230/715 (32%), Positives = 364/715 (50%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R ++E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCVDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>gi|432370583|ref|ZP_19613669.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE10]
gi|430884795|gb|ELC07730.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE10]
Length = 714
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 231/715 (32%), Positives = 365/715 (51%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L V+ ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFVSQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++ + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELVKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R ++E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCVDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E + +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMSKRG 702
>gi|425301222|ref|ZP_18691115.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
07798]
gi|408212859|gb|EKI37364.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
07798]
Length = 714
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 229/715 (32%), Positives = 366/715 (51%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKVEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DI + A + ++ +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADIKMIGNCKTAQEAEVLARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM++ K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMIITGKQLRAKQAVKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L ++FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASTEVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPRGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCATHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G + ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIMPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R L+E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCLDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E + +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCDRLVEMSERG 702
>gi|425092648|ref|ZP_18495733.1| fatty acid oxidation complex subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae WGLW5]
gi|405611874|gb|EKB84640.1| fatty acid oxidation complex subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae WGLW5]
Length = 714
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 235/714 (32%), Positives = 370/714 (51%), Gaps = 34/714 (4%)
Query: 8 MEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGG 64
+EV D +A+IT+ P +N L + ++ + V+ +V ++ F G
Sbjct: 9 LEVRADKIAVITIDAPGEKMNTLKAEFGSQVRGLIRQLRDDKSVRGVVFISAKADNFIAG 68
Query: 65 FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
DIN+ + A + + +++ I P++AA+ G LGGGLELA+ CH RI
Sbjct: 69 ADINMIARCRSAQEAEALARQGQQIMAE-IHGLSIPVIAAIHGACLGGGLELALACHGRI 127
Query: 125 AA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDA 179
+ KT+LGLPE+ LG++PG TQRLPRL+G+S A++MML K + + K GL+D
Sbjct: 128 CSDDEKTRLGLPEVQLGLLPGSGGTQRLPRLIGVSTALDMMLTGKQLWPRQALKAGLVDE 187
Query: 180 VVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLK--LARLQAKKTAPN 237
VV LL+ A+++A + +P R + +++ + R +L + + +KT N
Sbjct: 188 VVPQAILLQA----AVELALKGRPTSREVPVRERVLAGPLGRHLLFQFVGKQTQRKTQGN 243
Query: 238 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 297
P + L V+E G+ HG SG +EA+ F EL M S+ L +FFA K P +
Sbjct: 244 YPAVKRILQVVENGLAHGCSSGYAEEARAFGELAMSPQSQALRSIFFASTDLKKDPG-AE 302
Query: 298 IGLKPRGVRKVAVIGGGLMGSGIATAHILNN-IYVVLKEVNSEYLLKGIKTIEANVRGLV 356
G P +R VAV+GGGLMG GIA + V +K++ + +K + V
Sbjct: 303 AGPGP--LRSVAVLGGGLMGGGIAYVTACKGGLPVRIKDIQPRGINHALKYSWDLLNKQV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
+ +L + + + ++ G DY F D+VIEAV E + LKQ++ SE+E+ P I
Sbjct: 361 RQRRLRPVERDRQMALISGTTDYQGFAHRDVVIEAVFEDLALKQRMVSEVEQYGGPQTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + S ++IG HFFSP MPL+E++ + T Q I ++ + K
Sbjct: 421 ASNTSSLPIGDIAAHASRPGQVIGLHFFSPVEKMPLVEVIPHKGTDPQTIATVVQLAKRQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A L+ G + ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVADKAGFYVNRILAPYINEAMRLLVEGEPIEVIDNALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTYE---KGSKPKPDP 591
+ AF +R F P ++D +LK R G+ N +G Y YE + SK +PDP
Sbjct: 541 IDTGTKIIPVLESAFGER-FSPPANIIDAILKDDRKGRKNNRGFYLYETKGRKSKKRPDP 599
Query: 592 SVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDAS 651
+V P++ R S + + +++ E + ++NE+ R +E I+ A D D +
Sbjct: 600 AVYPLLGIGRPQSRL---------SAQQVAERCVMMMLNEAARCFDEQIIRSARDGDIGA 650
Query: 652 VLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGI 705
V G+ FP + GG + D +GA V L++ + +G F P L A +GI
Sbjct: 651 VFGIGFPPFLGGPFRYMDTIGAGEVAAILQRLAAQFGPRFTPCDTLLRMAEQGI 704
>gi|226228262|ref|YP_002762368.1| enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Gemmatimonas
aurantiaca T-27]
gi|226091453|dbj|BAH39898.1| enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Gemmatimonas
aurantiaca T-27]
Length = 737
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 234/718 (32%), Positives = 363/718 (50%), Gaps = 40/718 (5%)
Query: 12 NDGVAIITLINP--PVNALAI---PIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFD 66
++G+A+I P PVN L P+ + E+ + V A++++G + G D
Sbjct: 36 HEGIALIAYDQPGSPVNTLNSRVGPVFEQFFLRIEQDAA--IVAAVLVSGKTDSWIAGAD 93
Query: 67 INVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA 126
I Q++ D + S +L+++ + +KP++AA+ G ALGGGLE+A+ CH RI
Sbjct: 94 IEELQRITAPVDGERL-SRSGQLLLDRLAALRKPVIAAIHGAALGGGLEVALACHHRIIT 152
Query: 127 --PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVV 181
KT L LPE+ LG+IPG TQRLPR VGL A++++L K++ + + +GL+ +V
Sbjct: 153 DHAKTVLALPEVQLGLIPGAGGTQRLPRTVGLQVALDLILTGKNVRARKALPMGLVHELV 212
Query: 182 TSEELLKVSRLWALDIAARRKPWIRS-----LHRTDKLGSLSEAREVLKLARLQAKKTAP 236
LL V+ A +A + +R + R + S+ A K KKT
Sbjct: 213 HPAILLDVAMQRARQLAHGDRSAVRERRPGLVERALEENSVGRAIIFRKARESVTKKTGG 272
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
+ P A LDVIE G +G+L+EAK F EL + R L ++FFA + K
Sbjct: 273 HYPAPFAALDVIERGYRESFAAGLLEEAKRFGELAVSPECRQLAYLFFATTSLKK----- 327
Query: 297 DIGL------KPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEA 350
D GL PR V K+ V+G G MG+GI + V LK+ E L G K +
Sbjct: 328 DTGLPAGQNVAPRAVHKLGVLGAGFMGAGITAVAVQAGTVVRLKDGTVERLASGFKAVRD 387
Query: 351 NVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKAC 410
VR + + ++T+ + ++ + ++ G +DY F +VD+VIEAV E + +K ++ E+E+
Sbjct: 388 VVRERLVKRQITRVQFDDTMSLVGGTVDYRGFANVDLVIEAVFEDLDVKHQVLREVEETT 447
Query: 411 PPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLM 470
P I A+NTSTI + + ++++G HFFSP H MPLLE++ T TSA+ +
Sbjct: 448 PA-AIFASNTSTIPIRDIARAAKRPEQVLGMHFFSPVHRMPLLEVIVTPETSAETTATAV 506
Query: 471 TVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 530
GK + K +VV + GF VNR PY +V G + ID A+ FG P+GPF
Sbjct: 507 AYGKQLGKTVIVVQDGAGFYVNRILAPYLNECGRMVDEGASIEDIDKALVQFGFPVGPFT 566
Query: 531 LLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYE-KGSKPKP 589
LLD G +A + + AF R S + ++ SGR G+ KG Y Y+ G +
Sbjct: 567 LLDEVGLDIAGKSGPIMEAAFGPRMQPSATLRAVIASGRLGRKARKGFYRYDADGKRQGV 626
Query: 590 DPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
D S+ + R + P+ +EI + + P++NE+ R L+EGI+ D D
Sbjct: 627 DDSIYAMTPVGARRRTL-----PV----EEIQQRAVLPLLNEAVRCLDEGIIRSPRDGDI 677
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPL 707
+V G+ FP +RGG D +G V L + F+ ++ L RA + P
Sbjct: 678 GAVFGIGFPPFRGGPFRLLDTMGLANVVAQLDALHARFPGRFEVAKLLRARADRQQPF 735
>gi|383864612|ref|XP_003707772.1| PREDICTED: trifunctional enzyme subunit alpha, mitochondrial-like
[Megachile rotundata]
Length = 1200
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 245/723 (33%), Positives = 371/723 (51%), Gaps = 47/723 (6%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSGGFDINV 69
D VA++T+ +P VN L ++ + + + + +IVL +G G F G DI +
Sbjct: 483 DNVAVLTIDSPGAKVNTLNEEVMNEVAAVLQNVQTDSTINSIVLISGKAGCFIAGADITM 542
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA--P 127
Q A D + ++N IE KP+VAA++G LGGGLE+A+ CH R+A
Sbjct: 543 IQGCKTADD-GYKISFDGQQILNAIEKSYKPVVAAIQGSCLGGGLEVALACHCRLAVDDQ 601
Query: 128 KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT-- 182
KT LGLPE+ LG++PG TQRLPRL+ L A++M L K++ + + K GL+D +V
Sbjct: 602 KTNLGLPEVKLGLLPGAGGTQRLPRLISLPNALDMALTGKNVKAVKAKKFGLVDILVNRL 661
Query: 183 -------SEELLKVSRLWALDIAARRKPWIRSLHR-----TDKLGSLSEAREVLK---LA 227
E ++ A+ +A + R DKL + + + +K
Sbjct: 662 GPGIGTPEENTMRYLEETAIQVAKDVANGTLKIERGPKTLPDKLMKYALSYKFIKDQIFK 721
Query: 228 RLQ---AKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFF 284
R++ KKT P LDVI G+ G +G EA+ F EL + S+GL+ +FF
Sbjct: 722 RIKNETMKKTGGLYPAPLKILDVIRTGLDKGPAAGYEAEARAFGELAVTPQSKGLISLFF 781
Query: 285 AQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKG 344
Q K G V+KVAV+G GLMG+GI + VV+K+ N L +G
Sbjct: 782 GQTICQK----NRFGTPKSAVKKVAVVGAGLMGAGIIQVSVDKGFDVVMKDTNQVGLYRG 837
Query: 345 IKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFS 404
I I+ + V R K + + + L L LDY+ FK+ D+VIEAV E + +K K+
Sbjct: 838 INQIQKGMETAVKRKKYSGIQRDKYLARLDATLDYNSFKNADIVIEAVFEDIAIKHKVIK 897
Query: 405 ELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQ 464
E+E P HC++ATNTS I +N + +S D++IG H+FSP M LLEI+ + TS +
Sbjct: 898 EIEANTPQHCVVATNTSAIPINKIAAGSSRPDKVIGMHYFSPVDKMQLLEIITHDGTSTE 957
Query: 465 VILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPY-SQSARLLVSLGVDVFRIDSAIRSFG 523
I + VG KV + VG+ GF R S+S RL+ GVD +DS I+ FG
Sbjct: 958 TIKTAVDVGLKQGKVVITVGDGPGFYTTRILSAMLSESVRLMQE-GVDPTDLDSMIKKFG 1016
Query: 524 LPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLL---LKSGRNGKANGKGLYT 580
P+GP L D G V A S +A +R F+ V +L +K+G G+ +GKG+Y
Sbjct: 1017 FPVGPATLSDEVGIDVGAHISAHLVQALGER-FKGGDVTILSDMVKAGFLGRKSGKGIYI 1075
Query: 581 YEKGSKPKP-DPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEG 639
YE +K K + L I++ + P G S+ ++++ + F VNE+ LEE
Sbjct: 1076 YETHTKRKNINLEALNILKG----HQLEPKGS-TSIEDRQLRMVSRF--VNEAVLCLEEN 1128
Query: 640 IVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEE 699
I+ + D +V G+ FP + GG W D GA+ + ++++ YG+ FKP + L +
Sbjct: 1129 ILANPLEGDIGAVFGLGFPPFTGGPFRWVDYYGASRLVKKMEEFQSHYGDAFKPCQMLYD 1188
Query: 700 RAT 702
A+
Sbjct: 1189 MAS 1191
>gi|386281410|ref|ZP_10059072.1| fatty acid oxidation complex subunit alpha [Escherichia sp.
4_1_40B]
gi|432692317|ref|ZP_19927545.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE161]
gi|386121549|gb|EIG70164.1| fatty acid oxidation complex subunit alpha [Escherichia sp.
4_1_40B]
gi|431226665|gb|ELF23824.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE161]
Length = 714
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 228/713 (31%), Positives = 364/713 (51%), Gaps = 33/713 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I ++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIQVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKERPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA +K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVTKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA I V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTQGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDAS 651
++ P+I G+ ++ ++ E + ++NE+ R ++E ++ D D +
Sbjct: 600 AIYPLI-------GTQGQGR---ISAPQVAERCVMLMLNEAVRCVDEQVIRSVRDGDIGA 649
Query: 652 VLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 650 VFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>gi|419931035|ref|ZP_14448626.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli 541-1]
gi|388399288|gb|EIL60090.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli 541-1]
Length = 714
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 230/715 (32%), Positives = 365/715 (51%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP +PL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKIPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R ++E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCVDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>gi|415840477|ref|ZP_11521905.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
RN587/1]
gi|417282515|ref|ZP_12069815.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli 3003]
gi|425278640|ref|ZP_18669885.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
ARS4.2123]
gi|323187934|gb|EFZ73229.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
RN587/1]
gi|386246844|gb|EII88574.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli 3003]
gi|408201827|gb|EKI26970.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
ARS4.2123]
Length = 714
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 229/715 (32%), Positives = 367/715 (51%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKVEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + ++ +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEVLARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM++ K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMIITGKQLRAKQAVKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L ++FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASTEVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCATHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDISAHAARPEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G + ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIMPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R L+E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCLDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F L E + +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTSCDRLVEMSERG 702
>gi|397634111|gb|EJK71286.1| hypothetical protein THAOC_07294 [Thalassiosira oceanica]
Length = 706
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 247/732 (33%), Positives = 378/732 (51%), Gaps = 100/732 (13%)
Query: 12 NDGVAIITLINPP---VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGN---GGRFSGGF 65
DGVA++ + VNALA + LK+ A + AI+L GN G FS G
Sbjct: 8 TDGVAVLAISKASTSRVNALAAAVRVHLKESILSALEDPSINAIILVGNPDGTGMFSAGA 67
Query: 66 DINVFQK-VHGAGDVSLMPD--VSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHA 122
DI F G+G V+ + ++ + ++IE KPIVAA+ G+ALGGG+ELA+ H
Sbjct: 68 DIKEFSAPTDGSGGVTTAQNGVPTLNDLGHMIEGSSKPIVAALSGVALGGGMELALASHY 127
Query: 123 RIAAPKTQLGLPELTLGVIP---GTQRLPRLVGLSKAIEMMLLSK-SITSEEGWKLGLID 178
R+A + GLPE+ +G+IP GTQRLPRL G+ A++++L + ++ +EEG K+G +D
Sbjct: 128 RVADRTLRYGLPEVKIGLIPGAGGTQRLPRLCGVRHALDVILRGRINVGAEEGLKVGFLD 187
Query: 179 AVVTS-EELLKVSRLWAL-------DIAARRKPWIRSL-HRTDKLGSLSEAREVLKLARL 229
AV + E +L+ ++ WA R+ RS+ TD +G+ ++ + A
Sbjct: 188 AVASDGETVLECAQRWARWASVLSPQALGSRRLCNRSVPEDTDGIGN----SDMCEFALQ 243
Query: 230 QAKKTAPNMPQHQACLDVIEEGIVHGGYS-GVLKEAKVFKELVMLD-TSRGLVHVFFAQR 287
+ + ACL + ++ G+ E +F +L+ R H+FFA+R
Sbjct: 244 KLPREDKGGESAHACLKAVRASFELPSFTEGMEAEKDLFIDLLYHSLQGRAYRHIFFAER 303
Query: 288 ATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKT 347
++S SG TA V+L ++N + L G+K
Sbjct: 304 SSS---------------------------SGSKTA--ATGYTVILSDINQKGLEAGVKY 334
Query: 348 IEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELE 407
I ++G +G+L + K AL LK D S D D+++EAV E++ +K+ IFS L+
Sbjct: 335 IRGVLQGDAKKGRLKESKLKTALSSLKSSTDLSSLADCDIIVEAVFENLKVKRDIFSRLD 394
Query: 408 KAC-PPHCILATNTSTIDLNIVGEKTSSQDR--IIGAHFFSPAHVMPLLEIVRTERTSAQ 464
+L +NTST++++ + S Q R G HFFSPAH+M L+EI+R E TS +
Sbjct: 395 GIVRSKEALLLSNTSTLNVDTIASSLSPQRRAYCCGMHFFSPAHLMKLVEIIRGESTSPE 454
Query: 465 VILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLV------SLGVDVFRIDSA 518
+ + V K I+KVPVVVGNC GF NR PYS + LL+ S GV + IDSA
Sbjct: 455 TLDIVRAVTKRIRKVPVVVGNCDGFVGNRMLHPYSTESVLLLSEYGGGSEGVGIADIDSA 514
Query: 519 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 578
+ FG+ +GPF + D+AG D + +++ K GR G+ KG
Sbjct: 515 LLRFGMAVGPFAMYDIAG---------------NDIGYTELGDEMVEKLGRLGQKVYKGW 559
Query: 579 YTYE----KGSKPKPDPSVLPIIEECRRLS----NIMPGGKPISVTEKEIVEMILFPVVN 630
Y Y+ KG KP P P + +I++ + S MPG +EIV +L P+VN
Sbjct: 560 YDYDPKVGKGRKPLPSPEMQSLIDKYVKDSPNRGTKMPG--------EEIVYRVLLPLVN 611
Query: 631 ESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADA-VGANYVYTSLKKWSQLYGN 689
E+ ++LEEGI + SD+D + G FP+YRGG +FWAD VG V L+++ +++ N
Sbjct: 612 EAFKILEEGIALDPSDVDVIYLYGYGFPAYRGGPLFWADNDVGLRLVLDKLEEYFKMHPN 671
Query: 690 --FFKPSRFLEE 699
+F+PS L+E
Sbjct: 672 SEYFRPSNLLKE 683
>gi|417635283|ref|ZP_12285496.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
STEC_S1191]
gi|345387566|gb|EGX17388.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
STEC_S1191]
Length = 712
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 228/713 (31%), Positives = 363/713 (50%), Gaps = 33/713 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 6 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 65
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I ++AA+ G LGGGLELA+ CH R
Sbjct: 66 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIQVIAAIHGACLGGGLELALACHGR 124
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 125 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 184
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 185 DVVPHSILLEA----AVELAKKERPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 240
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 241 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 299
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA I V +K++N + + +K + G V
Sbjct: 300 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDINPQGINHALKYSWDQLEGKV 358
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 359 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 418
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 419 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 478
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 479 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTQGERVEHIDAALVKFGFPVGPIQLLDEVG 538
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 539 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 597
Query: 592 SVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDAS 651
++ P+I G+ ++ ++ E + ++NE+ R ++E ++ D D +
Sbjct: 598 AIYPLI-------GTQGQGR---ISAPQVAERCVMLMLNEAVRCVDEQVIRSVRDGDIGA 647
Query: 652 VLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 648 VFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 700
>gi|82777753|ref|YP_404102.1| multifunctional fatty acid oxidation complex subunit alpha
[Shigella dysenteriae Sd197]
gi|123742102|sp|Q32DJ4.1|FADJ_SHIDS RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|81241901|gb|ABB62611.1| putative enzyme [Shigella dysenteriae Sd197]
Length = 714
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 231/715 (32%), Positives = 364/715 (50%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQDQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT L LPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLSLPEVQLGLLPGSDGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F ELVM S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELVMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R ++E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCVDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVIAIMQRLATQYGSRFTPCERLVEMGARG 702
>gi|419392433|ref|ZP_13933245.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC15A]
gi|378237633|gb|EHX97656.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC15A]
Length = 720
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 230/715 (32%), Positives = 364/715 (50%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R ++E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCVDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>gi|410611602|ref|ZP_11322697.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola psychrophila 170]
gi|410168805|dbj|GAC36586.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola psychrophila 170]
Length = 727
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 243/714 (34%), Positives = 369/714 (51%), Gaps = 34/714 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T++V DGVAI+T+ P +N L + ++ ++ + +K +V ++G F
Sbjct: 28 TLDVREDGVAILTMDVPGESMNTLKVEFAEQIESVLQQINANSSIKGVVVISGKDNSFVA 87
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DI++ A D + + ++ IED VAA+ G ALGGGLELA+ CH R
Sbjct: 88 GADISMLAACETAEDATSIAKGGQDMF-QRIEDMPVTFVAAIHGPALGGGLELALACHYR 146
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ + KTQLGLPE+ LG++PG TQRLP+L+ + +A++MML SI +++ G++D
Sbjct: 147 VCSDDAKTQLGLPEVQLGLLPGSGGTQRLPKLISVQQAMKMMLTGASIRAKQAKNYGIVD 206
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREV-----LKLARLQ-AK 232
+V LL V A+++A + KP R+ + D +G E V K AR Q A
Sbjct: 207 HMVPQSILLDV----AIEMAKKPKPK-RNGPKLDLMGRFLENTSVGRNLMFKQARKQTAS 261
Query: 233 KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 292
KT N P + +D IE G+ G G+ EAK F LVM S L +FFA K
Sbjct: 262 KTQGNYPSPELIIDCIETGLSKGFKKGLEVEAKHFGHLVMSPESAALRSLFFATTDMKKE 321
Query: 293 PNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEAN 351
V G+KP ++KV V+GGGLMG GIA + +K++ SE + IK
Sbjct: 322 TGVE--GVKPASLKKVGVLGGGLMGGGIAFVTATKAGLPARIKDIRSEGIANAIKYSFDI 379
Query: 352 VRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACP 411
+ V RG + + + +L G +DY+ F D D+VIEAV E + LKQ + +E+E C
Sbjct: 380 LNKKVKRGFMHKSDMQKQMALLTGSVDYAGFSDADVVIEAVFEDLTLKQNMVAEIEANCA 439
Query: 412 PHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMT 471
H I A+NTS+I + + K +++IG H+FSP MPL E++ ++TS I +
Sbjct: 440 EHTIFASNTSSIPITQIAAKAKRPEQVIGLHYFSPVDKMPLAEVIAHDKTSDLTISTTVE 499
Query: 472 VGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQL 531
+ K K P+VV + GF VNR PY A ++ G + ID ++ FG P+GP +L
Sbjct: 500 LAKKQGKTPIVVKDGAGFYVNRILAPYMNEAAEVLLSGEPIAHIDRSLVKFGFPVGPVKL 559
Query: 532 LDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYE-KGSKPKPD 590
LD G V A + F DR +P D +L R GK N +G Y Y K + D
Sbjct: 560 LDEVGIDVGAKIGPILEAQFGDRFASNPGFDKILADDRKGKKNKRGFYDYSGKKLGKEVD 619
Query: 591 PSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDA 650
S+ ++ I P K ++ ++I E + ++NE+ L+EG+V A D D
Sbjct: 620 SSIYTLL-------GITPASK---MSHEQIAERCVLLMLNEAAMCLDEGVVRNARDGDIG 669
Query: 651 SVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
++ G+ FP + GG + +G V L+ + L GN F P+ L++ A +G
Sbjct: 670 AIFGIGFPPFLGGPFRYMHTLGIANVVARLEHYQGLLGNKFTPADSLKKMAEEG 723
>gi|110642544|ref|YP_670274.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli 536]
gi|123049009|sp|Q0TFA6.1|FADJ_ECOL5 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|110344136|gb|ABG70373.1| putative fatty oxidation complex alpha subunit [Escherichia coli
536]
Length = 714
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 230/710 (32%), Positives = 366/710 (51%), Gaps = 38/710 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + ++ +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEVLARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQAVKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L ++FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASTEVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCATHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G + ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHIDTALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIMPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ L+E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVCCLDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKP-SRFLE 698
+V G+ FP + GG + D++GA V +++ + YG+ F P +RF+E
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCNRFVE 697
>gi|420242990|ref|ZP_14746965.1| 3-hydroxyacyl-CoA dehydrogenase [Rhizobium sp. CF080]
gi|398064263|gb|EJL55952.1| 3-hydroxyacyl-CoA dehydrogenase [Rhizobium sp. CF080]
Length = 653
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 236/674 (35%), Positives = 345/674 (51%), Gaps = 58/674 (8%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+GV ++T+ N PVNA ++ + GL+ A + DV +V+TG G F GG DI F
Sbjct: 16 RNGVLVVTIDNAPVNATSVDVRGGLEKALAHAETAGDVAGVVITGAGKTFIGGADIKEFG 75
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
K +PDV + IE KP++AA+ G ALGGGLE+A+ CH RIA+P Q+
Sbjct: 76 K---PAMEPTLPDV-----IEKIEGLSKPVLAALNGAALGGGLEVALACHHRIASPAAQV 127
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
GLPE+ LG++PG TQRLPRL+G+ A++++ +S+ +E KLG+ID V +
Sbjct: 128 GLPEVKLGIVPGAGGTQRLPRLIGIPAALDLITSGRSVKVDEALKLGIIDEVAAGD---L 184
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLS------EAREVLKLARLQAKK--------- 233
V + A KP L RT +L + E V LAR + +K
Sbjct: 185 VEAAISAASALAGKP----LRRTGELNVAAVDPVEVEKASVKILARARGQKAPAEAVRLV 240
Query: 234 TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 293
T+ N P + G+ E F L + L HVFFA+R +SKV
Sbjct: 241 TSSNRPLAE----------------GLADERATFLALRDSREAAALRHVFFAERESSKVE 284
Query: 294 NVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVR 353
+ G++PR V+ + + G GLMGSGIA A + V+ + E KG I +
Sbjct: 285 ELE--GVEPRSVKTIGICGLGLMGSGIAVAALGAGYSVIGLDQTVEAAEKGFDRIIGLLE 342
Query: 354 GLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPH 413
V G+L Q L D + D+V+EAV + + +K +F L+K P
Sbjct: 343 RNVASGRLDQADFEAQKARLSVTADDIDLAPCDLVVEAVFDDLAVKTDLFRRLDKVIRPD 402
Query: 414 CILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVG 473
+LATNTS ++ + + T++ +R++G HFFSPAHVM LLE+VR RT+ V+ + V
Sbjct: 403 AVLATNTSYLNPDEIAAATANPERVLGLHFFSPAHVMRLLEVVRCARTAPDVLATGLAVA 462
Query: 474 KIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLD 533
K ++K+PVV G GF NR F Y + A L+ G ID+A+ +G P+G F + D
Sbjct: 463 KKLRKLPVVTGVTEGFIGNRIFSAYRREAEFLLEDGALPHEIDAALEDYGFPMGLFAVYD 522
Query: 534 LAGYGVAAATSKEFDKAFPDRSFQS-PLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPS 592
+AG +A A K A D S + + D L ++GR G+ G+G Y Y G K DP
Sbjct: 523 MAGLEIAWARRKR-QAATRDPSVRYVEIADTLCEAGRLGQKAGRGWYAYPDG-KRTIDPE 580
Query: 593 VLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASV 652
V IIE R I P + ++ EI+ +L + E +L E I RASD+D +
Sbjct: 581 VTAIIEAARANKGITPR----AFSKDEILRRMLGAMALEGEALLTERIAARASDIDLVMI 636
Query: 653 LGMSFPSYRGGIVF 666
G FP+++GG +F
Sbjct: 637 NGYGFPAHKGGPMF 650
>gi|16130274|ref|NP_416843.1| fused enoyl-CoA hydratase and epimerase and
isomerase/3-hydroxyacyl-CoA dehydrogenase [Escherichia
coli str. K-12 substr. MG1655]
gi|170081957|ref|YP_001731277.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli str. K-12 substr. DH10B]
gi|238901514|ref|YP_002927310.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli BW2952]
gi|300948508|ref|ZP_07162604.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
116-1]
gi|300956387|ref|ZP_07168679.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
175-1]
gi|301023610|ref|ZP_07187371.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
196-1]
gi|331642982|ref|ZP_08344117.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli H736]
gi|386594878|ref|YP_006091278.1| fatty acid oxidation complex subunit FadJ [Escherichia coli DH1]
gi|386705600|ref|YP_006169447.1| Fatty acid oxidation complex subunit alpha [Escherichia coli P12b]
gi|387622052|ref|YP_006129680.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli DH1]
gi|388478391|ref|YP_490583.1| fused enoyl-CoA hydratase, 3-hydroxybutyryl-CoA epimerase,
dodecenoyl-CoA D-isomerase, and 3-hydroxyacyl-CoA
dehydrogenase, subunit of anaerobic fatty acid oxidation
complex [Escherichia coli str. K-12 substr. W3110]
gi|404375692|ref|ZP_10980875.1| fatty acid oxidation complex subunit alpha [Escherichia sp. 1_1_43]
gi|417271642|ref|ZP_12058991.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
2.4168]
gi|417277462|ref|ZP_12064785.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
3.2303]
gi|417291359|ref|ZP_12078640.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli B41]
gi|417613823|ref|ZP_12264281.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
STEC_EH250]
gi|417618946|ref|ZP_12269360.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
G58-1]
gi|417945214|ref|ZP_12588449.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli XH140A]
gi|417975345|ref|ZP_12616144.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli XH001]
gi|418957282|ref|ZP_13509206.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli J53]
gi|419160031|ref|ZP_13704536.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC6D]
gi|419165155|ref|ZP_13709612.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC6E]
gi|419810072|ref|ZP_14334955.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O32:H37 str. P4]
gi|422766957|ref|ZP_16820684.1| fatty oxidation complex [Escherichia coli E1520]
gi|422771812|ref|ZP_16825501.1| fatty oxidation complex [Escherichia coli E482]
gi|422819480|ref|ZP_16867691.1| fatty acid oxidation complex subunit alpha [Escherichia coli M919]
gi|423704274|ref|ZP_17678699.1| fatty acid oxidation complex subunit alpha [Escherichia coli H730]
gi|425115761|ref|ZP_18517562.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
8.0566]
gi|425120482|ref|ZP_18522181.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
8.0569]
gi|425273513|ref|ZP_18664925.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TW15901]
gi|425284058|ref|ZP_18675097.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TW00353]
gi|432564602|ref|ZP_19801183.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE51]
gi|432576626|ref|ZP_19813086.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE56]
gi|432637590|ref|ZP_19873460.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE81]
gi|432686178|ref|ZP_19921475.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE156]
gi|432705142|ref|ZP_19940242.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE171]
gi|432737859|ref|ZP_19972617.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE42]
gi|432955862|ref|ZP_20147740.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE197]
gi|433048722|ref|ZP_20236075.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE120]
gi|450246101|ref|ZP_21900842.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli S17]
gi|3334437|sp|P77399.1|FADJ_ECOLI RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|254788656|sp|B1X9L4.1|FADJ_ECODH RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|259646369|sp|C4ZVN2.1|FADJ_ECOBW RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|1788682|gb|AAC75401.1| fused enoyl-CoA hydratase and epimerase and
isomerase/3-hydroxyacyl-CoA dehydrogenase [Escherichia
coli str. K-12 substr. MG1655]
gi|1799732|dbj|BAA16195.1| fused enoyl-CoA hydratase, 3-hydroxybutyryl-CoA epimerase,
dodecenoyl-CoA D-isomerase, and 3-hydroxyacyl-CoA
dehydrogenase, subunit of anaerobic fatty acid oxidation
complex [Escherichia coli str. K12 substr. W3110]
gi|169889792|gb|ACB03499.1| fused enoyl-CoA hydratase and epimerase and isomerase;
3-hydroxyacyl-CoA dehydrogenase [Escherichia coli str.
K-12 substr. DH10B]
gi|238861190|gb|ACR63188.1| fused enoyl-CoA hydratase and epimerase and
isomerase/3-hydroxyacyl-CoA dehydrogenase [Escherichia
coli BW2952]
gi|260448567|gb|ACX38989.1| fatty acid oxidation complex, alpha subunit FadJ [Escherichia coli
DH1]
gi|299880771|gb|EFI88982.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
196-1]
gi|300316784|gb|EFJ66568.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
175-1]
gi|300451984|gb|EFK15604.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
116-1]
gi|315136976|dbj|BAJ44135.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli DH1]
gi|323936461|gb|EGB32749.1| fatty oxidation complex [Escherichia coli E1520]
gi|323940964|gb|EGB37151.1| fatty oxidation complex [Escherichia coli E482]
gi|331039780|gb|EGI12000.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli H736]
gi|342362994|gb|EGU27106.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli XH140A]
gi|344194910|gb|EGV48981.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli XH001]
gi|345362017|gb|EGW94174.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
STEC_EH250]
gi|345375660|gb|EGX07607.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
G58-1]
gi|359332685|dbj|BAL39132.1| fused enoyl-CoA hydratase and epimerase and
isomerase/3-hydroxyacyl-CoA dehydrogenase, subunit of
anaerobic fatty acid oxidation complex [Escherichia coli
str. K-12 substr. MDS42]
gi|378007375|gb|EHV70344.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC6D]
gi|378011237|gb|EHV74182.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC6E]
gi|383103768|gb|AFG41277.1| Fatty acid oxidation complex subunit alpha [Escherichia coli P12b]
gi|384379929|gb|EIE37796.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli J53]
gi|385157156|gb|EIF19149.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O32:H37 str. P4]
gi|385536893|gb|EIF83778.1| fatty acid oxidation complex subunit alpha [Escherichia coli M919]
gi|385706513|gb|EIG43552.1| fatty acid oxidation complex subunit alpha [Escherichia coli H730]
gi|386235342|gb|EII67318.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
2.4168]
gi|386239530|gb|EII76457.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
3.2303]
gi|386253681|gb|EIJ03371.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli B41]
gi|404290832|gb|EJZ47734.1| fatty acid oxidation complex subunit alpha [Escherichia sp. 1_1_43]
gi|408193295|gb|EKI18848.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TW15901]
gi|408201748|gb|EKI26897.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TW00353]
gi|408568039|gb|EKK44081.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
8.0566]
gi|408569235|gb|EKK45240.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
8.0569]
gi|431093018|gb|ELD98689.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE51]
gi|431114661|gb|ELE18189.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE56]
gi|431170784|gb|ELE70973.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE81]
gi|431221960|gb|ELF19257.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE156]
gi|431242628|gb|ELF37043.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE171]
gi|431282319|gb|ELF73204.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE42]
gi|431467248|gb|ELH47259.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE197]
gi|431564493|gb|ELI37667.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE120]
gi|449319805|gb|EMD09851.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli S17]
Length = 714
Score = 340 bits (872), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 228/713 (31%), Positives = 363/713 (50%), Gaps = 33/713 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I ++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIQVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKERPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA I V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTQGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDAS 651
++ P+I G+ ++ ++ E + ++NE+ R ++E ++ D D +
Sbjct: 600 AIYPLI-------GTQGQGR---ISAPQVAERCVMLMLNEAVRCVDEQVIRSVRDGDIGA 649
Query: 652 VLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 650 VFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>gi|432869707|ref|ZP_20090300.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE147]
gi|431410293|gb|ELG93455.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE147]
Length = 714
Score = 340 bits (872), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 229/713 (32%), Positives = 365/713 (51%), Gaps = 33/713 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIANCKTAQEAEALARQGQQLMAE-IHALPVPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 MCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPQSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K +VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTAIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDAS 651
++ P+I G+ ++ ++ E + ++NE+ R LEE ++ D D +
Sbjct: 600 AIYPLI-------GTQGQGR---LSAPQVAERCVMLMLNEAVRCLEEQVIRSVRDGDIGA 649
Query: 652 VLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
V G+ FP + GG + D++GA V +++ + YG+ F P L E + +G
Sbjct: 650 VFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMSKRG 702
>gi|427805477|ref|ZP_18972544.1| putative enzyme [Escherichia coli chi7122]
gi|427810037|ref|ZP_18977102.1| putative enzyme [Escherichia coli]
gi|443618415|ref|YP_007382271.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli APEC O78]
gi|412963659|emb|CCK47584.1| putative enzyme [Escherichia coli chi7122]
gi|412970216|emb|CCJ44860.1| putative enzyme [Escherichia coli]
gi|443422923|gb|AGC87827.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli APEC O78]
Length = 714
Score = 340 bits (872), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 230/715 (32%), Positives = 364/715 (50%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPAIERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R ++E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCVDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>gi|419939000|ref|ZP_14455803.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli 75]
gi|388408717|gb|EIL69050.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli 75]
Length = 714
Score = 340 bits (872), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 230/715 (32%), Positives = 364/715 (50%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++ + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELVKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVTEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTQGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R L+E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCLDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E + +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMSKRG 702
>gi|417163609|ref|ZP_11998797.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
99.0741]
gi|386172834|gb|EIH44848.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
99.0741]
Length = 713
Score = 340 bits (872), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 237/716 (33%), Positives = 371/716 (51%), Gaps = 39/716 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPGSD 302
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEANVRGL 355
P + V ++GGGLMG GIA + V +K++N + + +K + G
Sbjct: 303 ---APPALLNSVGILGGGLMGGGIAYVTACKAGLPVRIKDINPQGINHALKYSWDQLEGK 359
Query: 356 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCI 415
V R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 360 VRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTI 419
Query: 416 LATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKI 475
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 420 FASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKK 479
Query: 476 IKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLA 535
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD
Sbjct: 480 QGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEV 539
Query: 536 GYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--D 590
G + A+ +R F +P +V +L R G+ NG+G Y Y +KG K K D
Sbjct: 540 GIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVD 598
Query: 591 PSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLD 648
P++ P+I + RLS ++ E + ++NE+ R ++E ++ D D
Sbjct: 599 PAIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCVDEQVIRSVRDGD 646
Query: 649 DASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 647 IGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>gi|365850548|ref|ZP_09391011.1| fatty oxidation complex, alpha subunit FadJ [Yokenella regensburgei
ATCC 43003]
gi|364567214|gb|EHM44886.1| fatty oxidation complex, alpha subunit FadJ [Yokenella regensburgei
ATCC 43003]
Length = 716
Score = 340 bits (872), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 230/714 (32%), Positives = 361/714 (50%), Gaps = 32/714 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
++ V D VA+ITL P +N L ++ + D++ +VL + F
Sbjct: 8 SLNVRPDNVAVITLDVPGEKMNTLKAEFGTEVRALLRQIRENHDIRGVVLISAKEDNFVA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ + A + + +++ I P+VAA+ G LGGGLELA+ CHAR
Sbjct: 68 GADINMIGRCKTALEAEALAKQGQQVMAE-IHAMPVPVVAAIHGACLGGGLELALACHAR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ KT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + + + K GL+D
Sbjct: 127 LCTDDAKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRARQALKAGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVL--KLARLQAKKTAP 236
VV + LL+ A++ P R L +++ + R VL + + +KT
Sbjct: 187 EVVAASILLEA----AVERVKNGVPEHRRLPVRERVLAGPLGRTVLFNLVGKKTEQKTLG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P L VIE G+ HG SG EA+ F EL M S+ L H+FFA K P +
Sbjct: 243 NYPATTRILQVIETGLAHGISSGYEAEARAFGELAMTPQSQSLRHIFFASTDLKKDPGAS 302
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
R V + G + + + V +K++N+ + +K + V
Sbjct: 303 AESGPLRAVGILGGGLMGGGIAFVTACK--GKLPVRIKDINANGINHALKYSWDLLDKKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R + + ++ L ++ G DYS F D+VIEAV E + LKQK+ +E+E+ C PH +
Sbjct: 361 RRRHIRASERDSQLALISGTTDYSGFSHRDVVIEAVFEDLALKQKMVTEVEQHCAPHTVF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+E++ TS + I + + K
Sbjct: 421 ASNTSSLPIGDIAALAARPEQVIGLHFFSPVEKMPLVEVIPHAGTSERTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A L++ G + ID A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVADKAGFYVNRILAPYINEAIRLLTEGQRIENIDKALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKG--SKPKPDP 591
++A+ +R F+ P ++D +L R G+ N +G Y Y EKG SK +PDP
Sbjct: 541 IDTGTKIIPVLEEAYGER-FRPPANVIDAILNDDRKGRKNNRGFYLYGEKGRKSKKQPDP 599
Query: 592 SVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDAS 651
++ ++ G+ E+ + E + ++NE+ R +E +V A D D +
Sbjct: 600 AIYALVGST---------GQKNEFNEQLMAERCVMLMLNEAARCYDEQVVRSARDGDIGA 650
Query: 652 VLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGI 705
V G+ FP + GG + D +GA V L++ + +G F P L +RA +G+
Sbjct: 651 VFGIGFPPFLGGPFHYMDTLGAREVVAILQRLAVQHGPRFTPCESLLQRAEQGL 704
>gi|417263965|ref|ZP_12051361.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
2.3916]
gi|418303792|ref|ZP_12915586.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
UMNF18]
gi|339415890|gb|AEJ57562.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
UMNF18]
gi|386222522|gb|EII44949.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
2.3916]
Length = 714
Score = 340 bits (872), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 228/713 (31%), Positives = 363/713 (50%), Gaps = 33/713 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I ++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIQVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKERPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTRSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA I V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTQGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDAS 651
++ P+I G+ ++ ++ E + ++NE+ R ++E ++ D D +
Sbjct: 600 AIYPLI-------GTQGQGR---ISAPQVAERCVMLMLNEAVRCVDEQVIRSVRDGDIGA 649
Query: 652 VLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 650 VFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>gi|269103138|ref|ZP_06155835.1| enoyl-CoA hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase/3-hydroxyacyl-CoA
dehydrogenase/3-hydroxybutyryl-CoA epimerase
[Photobacterium damselae subsp. damselae CIP 102761]
gi|268163036|gb|EEZ41532.1| enoyl-CoA hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase/3-hydroxyacyl-CoA
dehydrogenase/3-hydroxybutyryl-CoA epimerase
[Photobacterium damselae subsp. damselae CIP 102761]
Length = 706
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 231/714 (32%), Positives = 369/714 (51%), Gaps = 40/714 (5%)
Query: 7 TMEVGNDGVAI--ITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ + +D +A I + N +N L + E+ + D+K +V+ +G F
Sbjct: 7 TLTIDDDKLAWLKIDVPNEKMNTLQDCFATEISQVLEQLEASSDIKGMVIYSGKPDNFVA 66
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DI + A + EL L E+ +VAA+ G LGGGLELA+ CH+R
Sbjct: 67 GADIKMLAACETAEQAQQLATTGQELFTRL-ENLPFHVVAAIHGPCLGGGLELALACHSR 125
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+A KT++GLPE+ LG++PG TQRLPRL+G++ A++M+L K + +++ K+G++D
Sbjct: 126 VATLDDKTRIGLPEVQLGLLPGSGGTQRLPRLIGVANALDMILTGKQLRAKKAKKMGVVD 185
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVL--KLARLQAKKTAP 236
AVV SE LL V++ +IA KP +S + +G R V+ + + +KT
Sbjct: 186 AVVDSEILLTVAK----EIALEHKPKRQSSWQNWAMGGNPLGRSVVFDQAKKKTEQKTRG 241
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P A L+VI+ G+ G G EA+ F ELVM S+ L H+FFA A K
Sbjct: 242 NYPATTAILEVIKHGLDKGLSQGYALEAQRFGELVMSSQSKALRHIFFATTAMKKEQGSL 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEANVRGL 355
+ + + + V+GGGLMG+GI+ ++ V +K+V+++ +L +
Sbjct: 302 E---QAHPLTHIGVLGGGLMGAGISHVTATKADLPVRIKDVHNDGVLNALNYNYKLFSKK 358
Query: 356 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCI 415
R +++ + N + M G D+ + +DMV+EAV E + LK ++ ++E P I
Sbjct: 359 RDRKIISKAQLQNQMSMFTGGTDFIGYNQLDMVVEAVFEDLALKHQMVRDIETHSKPDTI 418
Query: 416 LATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTE------RTSAQVILDL 469
ATNTS++ ++ + ++++G H+FSP MPL+EI+ + TS Q I
Sbjct: 419 FATNTSSLPIHQIASAAQRPEQVVGLHYFSPVEKMPLVEIIPHQGTELGGATSQQTIETA 478
Query: 470 MTVGKIIKKVPVVVGNCTGFAVNRAFFPY-SQSARLLVSLGVDVFRIDSAIRSFGLPIGP 528
+T+ K K P+VV + GF VNR PY +++ARLL+ G + ID ++ FG P+GP
Sbjct: 479 ITLAKKQGKTPIVVADTAGFYVNRILAPYMNEAARLLLE-GEPIEHIDRSLLDFGFPVGP 537
Query: 529 FQLLDLAGYGVAAATSKEFDKAFPDRSFQSP-LVDLLLKSGRNGKANGKGLYTYEKGSKP 587
LLD G + A S +R FQ+P L D LL GR G+ +GKG Y Y G K
Sbjct: 538 ITLLDEVGVDIGAKISPILLAELGER-FQAPDLFDTLLNDGRKGRKSGKGFYLY-NGKKK 595
Query: 588 KPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDL 647
+ D V +L N+ P + +++ ++NE+ R L+EG++ A D
Sbjct: 596 EADKQVY-------QLLNLEP---EQHLAGQDLALRCTLMMLNEAVRCLDEGVIQSARDG 645
Query: 648 DDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERA 701
D ++ G+ FP + GG + D++G + V +S YG F P + RA
Sbjct: 646 DIGAIFGIGFPPFLGGPFHYMDSLGLDRVLDMFIDYSHKYGERFAPCEGIVMRA 699
>gi|432602939|ref|ZP_19839183.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE66]
gi|431141513|gb|ELE43278.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE66]
Length = 714
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 228/713 (31%), Positives = 365/713 (51%), Gaps = 33/713 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIANCKTAQEAEALARQGQQLMAE-IHALPVPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 MCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPQSILLEA----AVELAKQERPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDRQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDAS 651
++ P+I G+ ++ ++ E + ++NE+ R L+E ++ D D +
Sbjct: 600 AIYPLI-------GTQGQGR---LSAPQVAERCVMLMLNEAVRCLDEQVIRSVRDGDIGA 649
Query: 652 VLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
V G+ FP + GG + D++ A V +++ + YG+ F P L E + +G
Sbjct: 650 VFGIGFPPFLGGPFRYIDSLDAGEVVAIMQRLATQYGSRFTPCERLVEMSKRG 702
>gi|332278508|ref|ZP_08390921.1| multifunctional fatty acid oxidation complex subunit alpha
[Shigella sp. D9]
gi|332100860|gb|EGJ04206.1| multifunctional fatty acid oxidation complex subunit alpha
[Shigella sp. D9]
Length = 714
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 230/715 (32%), Positives = 364/715 (50%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELEMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R ++E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCVDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>gi|351709605|gb|EHB12524.1| Peroxisomal bifunctional enzyme [Heterocephalus glaber]
Length = 714
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 233/713 (32%), Positives = 369/713 (51%), Gaps = 46/713 (6%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A+I L NPPVN +++P++ G+++ ++A + +KAIV++G G F G DI+ F+
Sbjct: 11 LALIRLRNPPVNTISLPVIRGIREGLKKAALDNTIKAIVISGADGNFCAGADIHSFKAPI 70
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
+ + + L+V+ I+ KP+VAA++G+ALGGGLELA+GCH RIA + Q+G P
Sbjct: 71 SSAE-------GLGLLVDEIQRYGKPVVAAIQGVALGGGLELALGCHYRIAHAQAQVGFP 123
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 191
E+T+G++PG TQ LPRL+G + I + E KLG++D V+ S+ L + +
Sbjct: 124 EVTIGILPGGRGTQLLPRLIG----------RRYILAGEALKLGILDEVMKSDSLEEAIK 173
Query: 192 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 251
+ +P R L+R + SLS A + +K P + C+ ++
Sbjct: 174 FTQKILDQPLEP-RRILNRP--VPSLSNMENTFTEAFAKMRKQYPGYLAPETCVRSVQAS 230
Query: 252 IVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK---PRGVRKV 308
+ + G+ KE ++F+ L +R L + FFA+R+ +K + K R + V
Sbjct: 231 MKYPYEEGIRKEEELFQYLRESGQARALQYAFFAERSVNKWSTPSGASWKTATARPISSV 290
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
V+G G MG GIA + I V+ E + + L K + + + + + Q
Sbjct: 291 GVLGLGTMGRGIAISFARVGIPVIAVESDQKQLEAAKKIVTSTLEKEAAKS-MQQSGQRE 349
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
+ + E VD+VIEAV E + LK+++F+EL C P L TNTS +D++ +
Sbjct: 350 SAPKPRFSSSMKELASVDLVIEAVFEDMNLKKQVFAELSAVCKPEAFLCTNTSALDVDEI 409
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
TS +IG HFFSPAHVM L+E++ + +S I +M + K +KK+ VVVGNC G
Sbjct: 410 AASTSRPQLVIGTHFFSPAHVMKLVEVIPSRHSSPTTIATVMNLSKKMKKIAVVVGNCYG 469
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVA-------A 541
F NR PY L+ G ID A+ FGL +GP ++ DLAG V
Sbjct: 470 FVGNRMLQPYFNQTYFLLEDGSKPEDIDQALEEFGLKMGPLRMSDLAGLDVGWKVRKGRG 529
Query: 542 ATSKEFDKAFPDR----SFQSPLVDLLLKSGRNGKANGKGLYTYEK--GSKPKPDPSVLP 595
T P R + SP+ D+L GR G+ G+G Y Y+K G KPDP +
Sbjct: 530 LTGPALPPGTPARKRGNARYSPIPDMLCDLGRFGQKTGQGWYLYDKPLGRVHKPDPWLSK 589
Query: 596 IIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGM 655
+ E R +I KP + + EI E L+ ++NE+ +L EG+ +D + G
Sbjct: 590 FLSEYRETHHI----KPRVIDQDEIRERCLYALINEAFHILGEGMAASPEHIDVIYLHGY 645
Query: 656 SFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF--FKPSRFLEERATKGIP 706
+P +RGG +F+A VG V L+K+ Q + +P +L++ A++G P
Sbjct: 646 GWPRHRGGPMFYASTVGLPTVLEKLQKYYQQNPDIPQLEPCNYLKKLASQGNP 698
>gi|365855359|ref|ZP_09395413.1| putative noyl-CoA hydratase/3,2-trans-enoyl-CoA
isomerase/3-hydroxyacyl-CoA dehydrogenase
[Acetobacteraceae bacterium AT-5844]
gi|363719281|gb|EHM02591.1| putative noyl-CoA hydratase/3,2-trans-enoyl-CoA
isomerase/3-hydroxyacyl-CoA dehydrogenase
[Acetobacteraceae bacterium AT-5844]
Length = 698
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 233/690 (33%), Positives = 365/690 (52%), Gaps = 28/690 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
VA++ + PVNAL+ P+ GL+ + ++A+VL G GRF G DI +++
Sbjct: 17 VAVVQVSYAPVNALSRPVREGLQAAARALAADPSIQAVVLHGGPGRFIAGADI---KEMD 73
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
D ++PDV + IE +P+VAA++G ALGGGLE+A+ C R+A PK +GL
Sbjct: 74 LPLDEPVLPDV-----IAAIEAIPQPVVAAIDGFALGGGLEIALACDLRLATPKASVGLV 128
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 191
E LG+IPG TQRLPRLVG +KAIE++ +K + + + +LG++D VV + L + R
Sbjct: 129 ETRLGIIPGSGGTQRLPRLVGTAKAIELIGEAKILKAAQAVELGILDRVVEGDLLAEAIR 188
Query: 192 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 251
+ AA+R+ + + D+ + + +K + +P A ++ E
Sbjct: 189 VAPQ--AAKRRVSVLPIPSRDETAEEAATQAAVKKGK--------GVPAIAAAAALLRET 238
Query: 252 IVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVI 311
G+ +E + F L + L H+F A+R +VP + G+ PR V++VAVI
Sbjct: 239 AGLAFPEGLKRERETFLPLRDSAEAAALRHLFLAEREAGRVPGLE--GVSPREVKRVAVI 296
Query: 312 GGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALK 371
GGG MGSGIA A + V + E ++E + V G+LT+ A L
Sbjct: 297 GGGTMGSGIAIAVADAGLPVQVLERDAEAAEACAARLRDTYGKQVKSGRLTEAAAAERLA 356
Query: 372 MLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEK 431
++ V D+S +VD++IEA E + +K IFS L+K P +LATNTS +D + +
Sbjct: 357 LITPVHDWSLLAEVDLIIEAAFEEMGVKADIFSRLDKVAKPGAVLATNTSYLDPDAIAGF 416
Query: 432 TSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAV 491
TS ++G HFF+PA+VM LLE+VR +T+ V+ + GK + K+P+V G C GF
Sbjct: 417 TSRPQDVLGLHFFAPANVMKLLEVVRCAKTAPDVLATGLAFGKKLGKLPIVSGVCEGFIG 476
Query: 492 NRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAF 551
NR + Y + A LV+ G +D+A+ +FG +G F + D++G +A A K
Sbjct: 477 NRIYAVYRRHAEYLVADGASPREVDAALEAFGFAMGIFAVSDMSGLDIAWAMRKRRAATR 536
Query: 552 PDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGK 611
+ D L ++GR G+ G G Y Y G K +PDP V +I E R + I
Sbjct: 537 DPAERYVTIADKLCEAGRLGRKTGAGWYDYASG-KAQPDPVVDAVIAEERAAAGIT---- 591
Query: 612 PISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAV 671
P + ++++I +L + NE+ +++ EGI +R SD+D G FP RGG +F AD +
Sbjct: 592 PRTFSQQDIQNRLLAVMANEAAKIVAEGIALRPSDIDLVFTNGYGFPRLRGGPLFAADQM 651
Query: 672 GANYVYTSLKKWSQLYGNFFKPSRFLEERA 701
G V ++ + G +P+ L E A
Sbjct: 652 GLGPVLAEVEAAAAAGGKGSEPAPLLRELA 681
>gi|331653785|ref|ZP_08354786.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli M718]
gi|331048634|gb|EGI20710.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli M718]
Length = 730
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 231/715 (32%), Positives = 364/715 (50%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 24 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 83
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 84 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 142
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 143 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 202
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 203 DVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 258
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 259 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 317
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 318 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLDGKV 376
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 377 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 436
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 437 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 496
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 497 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 556
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 557 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 615
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R ++E ++ D D
Sbjct: 616 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCVDEQVIRSVRDGDI 663
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 664 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 718
>gi|432450494|ref|ZP_19692758.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE193]
gi|433034173|ref|ZP_20221888.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE112]
gi|430979477|gb|ELC96253.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE193]
gi|431550559|gb|ELI24549.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE112]
Length = 714
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 232/715 (32%), Positives = 364/715 (50%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINPP--VNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAIITIDVPAEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQKLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDHPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA I V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLVLISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R ++E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCVDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>gi|170019351|ref|YP_001724305.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli ATCC 8739]
gi|189044422|sp|B1IXA5.1|FADJ_ECOLC RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|169754279|gb|ACA76978.1| fatty acid oxidation complex, alpha subunit FadJ [Escherichia coli
ATCC 8739]
Length = 714
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 230/715 (32%), Positives = 365/715 (51%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAIITIDVPDEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++ + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELVKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R ++E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCVDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E + +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMSKRG 702
>gi|170767402|ref|ZP_02901855.1| fatty oxidation complex, alpha subunit FadJ [Escherichia albertii
TW07627]
gi|170123736|gb|EDS92667.1| fatty oxidation complex, alpha subunit FadJ [Escherichia albertii
TW07627]
Length = 714
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 234/719 (32%), Positives = 370/719 (51%), Gaps = 37/719 (5%)
Query: 3 APRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGG 59
A T+ V D VA+I++ P +N L + ++ ++ +++ +V ++
Sbjct: 4 ASAFTLNVRLDNVAVISIDVPGEKMNTLKAEFASQVRAIIKQLRENKNLRGVVFISAKPD 63
Query: 60 RFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMG 119
F G DIN+ A + + +L+ I P++AAV G LGGGLELA+
Sbjct: 64 NFIAGADINMIGNCKTAQEAEALARQGQQLMAE-IHALPVPVIAAVHGACLGGGLELALA 122
Query: 120 CHARIAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKL 174
CH R+ + PKT LGLPE+ LG++PG TQRLPRLVG+S A+EM+L K + +++ K
Sbjct: 123 CHGRVCSDDPKTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALEMILTGKQLRAKQALKS 182
Query: 175 GLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAK 232
GL+D VV LL+ A+++A + + R+L +++ G L A + + +
Sbjct: 183 GLVDDVVPHSILLEA----AVELAKQNRQASRTLPIRERVMAGPLGRALLFKMVGKKTEQ 238
Query: 233 KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 292
KT N P + L+VIE G+ G SG EA+ F EL M S+ L ++FFA K
Sbjct: 239 KTQGNYPATERILEVIETGLAQGVSSGYDAEARAFGELAMTPQSQALRNLFFASTEVKKD 298
Query: 293 PNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANV 352
P +D+ P + G G TA + V +K++N++ + +K +
Sbjct: 299 PG-SDVEPGPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINAQGINHALKYSWDQL 356
Query: 353 RGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPP 412
V R L + + L ++ G DY F D++IEAV E++ LKQK+ +E+E+ C
Sbjct: 357 DSKVRRRHLKASERDKQLALISGTTDYRGFSHRDLIIEAVFENLELKQKMVAEVEQNCAS 416
Query: 413 HCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTV 472
H I A+NTS++ ++ + + +++IG HFFSP MPL+EI+ TSAQ I + +
Sbjct: 417 HTIFASNTSSLPISDIAAYATRPEQVIGLHFFSPVEKMPLVEIIPHVGTSAQTIATTVKL 476
Query: 473 GKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLL 532
K K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLL
Sbjct: 477 AKKQGKTPIVVQDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLL 536
Query: 533 DLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP 589
D G + + +R F +P +V +L R G+ NG+G Y Y KG K K
Sbjct: 537 DEVGIDTGTKIIPVLEATYGER-FSAPANIVSSILNDDRKGRKNGRGFYLYGPKGRKSKK 595
Query: 590 --DPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRAS 645
DP++ P+I + RLS +I E + ++NE+ R L+E ++ A
Sbjct: 596 QVDPAIYPLIGAQGQGRLS------------APQIAERCVMLMLNEAVRCLDEQVIRSAR 643
Query: 646 DLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
D D +V G+ FP + GG + D +GA V +++ + YG+ F P L+E + +G
Sbjct: 644 DGDIGAVFGIGFPPFLGGPFRYIDTLGAGEVVAIMQRLATQYGSRFTPCERLQEMSERG 702
>gi|45384238|ref|NP_990387.1| trifunctional enzyme subunit alpha, mitochondrial [Gallus gallus]
gi|2737971|gb|AAB94317.1| CFR-associated protein p70 [Gallus gallus]
Length = 770
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 231/733 (31%), Positives = 371/733 (50%), Gaps = 46/733 (6%)
Query: 2 AAPRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVK-AIVLTGNG 58
A V+ ++ D VA++ P VN L+ + A + E + + VK A++++
Sbjct: 44 ARTHVSYDIKGD-VAVVRFNTPNSKVNTLSKQLNAEFTEVMNEIWTNEAVKSAVLISSKP 102
Query: 59 GRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAM 118
G F G DI++ + +V+ + +++ IE KPIVAA+ G LGGGLE+A+
Sbjct: 103 GSFIAGADIDMIAACKTSQEVTQLSQEGQKML-EKIEQSPKPIVAAISGSCLGGGLEVAI 161
Query: 119 GCHARIAAP--KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWK 173
CH RIA KT LG PE+ LG++PG TQRLP++VGL A +MML ++I ++ K
Sbjct: 162 ACHYRIATKDRKTILGTPEVLLGLLPGAGATQRLPKMVGLPAAFDMMLTGRNINADRAKK 221
Query: 174 LGLIDAVV-------------TSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEA 220
+GL+D +V T E L +V+ +A +A + RS ++ + A
Sbjct: 222 MGLVDQLVDPLGPGVKPPEARTIEYLEEVAIGFARGLANKTVSAKRSKGLVQRITDYAMA 281
Query: 221 REVLKLARLQAKKTAPNMPQHQA---------CLDVIEEGIVHGGYSGVLKEAKVFKELV 271
L R Q KT N Q Q ++V++ G+ G +G L E++ F L
Sbjct: 282 ---LPFVRQQVYKTVENKVQKQTKGLYPAPLKIIEVVKAGLDQGHDTGYLTESQSFGHLA 338
Query: 272 MLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYV 331
M + S+ L+ ++ Q K G R V+ +AV+G GLMG+GIA + +
Sbjct: 339 MTNESKALIGLYHGQVRCKK----NKFGTPQREVKTLAVLGAGLMGAGIAQVSVDKGLKT 394
Query: 332 VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEA 391
+LK+ + L +G + + + G V + LT + ++ L + LDY F+ DMVIEA
Sbjct: 395 ILKDTTQQGLDRGQQQVFKGLNGKVKKKSLTSFERDSILSNMTAQLDYKGFEKADMVIEA 454
Query: 392 VIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMP 451
V E + +K K+ E+E PPHCI A+NTS + +N + + +++IG H+FSP M
Sbjct: 455 VFEDISIKHKVLKEVEAVIPPHCIFASNTSALPINQIAAVSQRPEKVIGMHYFSPVDKMQ 514
Query: 452 LLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVD 511
LLEI+ T++TS + VG KV +VV + GF R P ++ G+D
Sbjct: 515 LLEIITTDKTSQDTAASAVAVGLKQGKVVIVVKDGPGFYTTRCLGPMLAEVGRVLQEGID 574
Query: 512 VFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGR 569
++D+ +FG P+G L+D G VA +++ KAF +R L L+++ G
Sbjct: 575 PKKVDAISTAFGFPVGAATLIDEVGVDVATHVAEDLGKAFGERFGGGSIGLFKLMVQKGF 634
Query: 570 NGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVV 629
G+ GKG Y Y++G K + S + I L+ KP T+++I ++ V
Sbjct: 635 LGRKAGKGFYIYQEGVKNRSLNSGMDEI-----LAQFKLPAKPEVCTDEDIQMRLVTRFV 689
Query: 630 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 689
NE+ L+EGI+ + D +V G+ FP GG +AD+ GA + L+K+ +YG+
Sbjct: 690 NEAAMCLQEGILSNPMEGDIGAVFGLGFPPCLGGPFRYADSYGAKQLVDKLRKYEAVYGS 749
Query: 690 FFKPSRFLEERAT 702
F P + L + A
Sbjct: 750 QFTPCQLLLDYAN 762
>gi|329998416|ref|ZP_08303100.1| fatty oxidation complex, alpha subunit FadJ [Klebsiella sp. MS
92-3]
gi|365137258|ref|ZP_09343978.1| fatty acid oxidation complex subunit alpha [Klebsiella sp.
4_1_44FAA]
gi|419764099|ref|ZP_14290339.1| fatty oxidation complex, alpha subunit FadJ [Klebsiella pneumoniae
subsp. pneumoniae DSM 30104]
gi|328538691|gb|EGF64784.1| fatty oxidation complex, alpha subunit FadJ [Klebsiella sp. MS
92-3]
gi|363656270|gb|EHL95034.1| fatty acid oxidation complex subunit alpha [Klebsiella sp.
4_1_44FAA]
gi|397742682|gb|EJK89900.1| fatty oxidation complex, alpha subunit FadJ [Klebsiella pneumoniae
subsp. pneumoniae DSM 30104]
Length = 714
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 233/713 (32%), Positives = 367/713 (51%), Gaps = 34/713 (4%)
Query: 8 MEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGG 64
+EV D +A+IT+ P +N L + ++ + V+ +V ++ F G
Sbjct: 9 LEVRADKIAVITIDAPGEKMNTLKAEFGSQVRGLIRQLRDDKSVRGVVFISAKADNFIAG 68
Query: 65 FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
DIN+ + A + + +++ I P++AA+ G LGGGLELA+ CH RI
Sbjct: 69 ADINMIARCRSAQEAEALARQGQQIMAE-IHGLSIPVIAAIHGACLGGGLELALACHGRI 127
Query: 125 AA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDA 179
+ KT+LGLPE+ LG++PG TQRLPRL+G+S A++MML K + + K GL+D
Sbjct: 128 CSDDEKTRLGLPEVQLGLLPGSGGTQRLPRLIGVSTALDMMLTGKQLRPRQALKAGLVDE 187
Query: 180 VVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLK--LARLQAKKTAPN 237
VV LL+ A+++A + +P R + +++ + R +L + + +KT N
Sbjct: 188 VVPQAILLQA----AVELALKGRPTSREVPVRERVLAGPLGRHLLFQFVGKQTQRKTQGN 243
Query: 238 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 297
P + L V+E G+ HG SG +EA+ F EL M S+ L +FFA K P
Sbjct: 244 YPAVKRILQVVENGLAHGCSSGYAEEARAFGELAMSPQSQALRSIFFASTDLKKDPGAE- 302
Query: 298 IGLKPRGVRKVAVIGGGLMGSGIATAHILNN-IYVVLKEVNSEYLLKGIKTIEANVRGLV 356
P +R VAV+GGGLMG GIA + V +K++ + +K + V
Sbjct: 303 --AGPGSLRSVAVLGGGLMGGGIAYVTACKGGLPVRIKDIQPRGINHALKYSWDLLNKQV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
+ +L + + + ++ G DY F D+VIEAV E + LKQ++ SE+E+ P I
Sbjct: 361 RQRRLRPVERDRQMALISGTTDYQGFAHRDVVIEAVFEDLALKQRMVSEVEQYGGPQTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + S ++IG HFFSP MPL+E++ + T Q I ++ + K
Sbjct: 421 ASNTSSLPIGDIAAHASRPGQVIGLHFFSPVEKMPLVEVIPHKGTDPQTIATVVQLAKRQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A L+ G + ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVADKAGFYVNRILAPYINEAMRLLVEGEPIEVIDNALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTYE---KGSKPKPDP 591
+ AF +R F P ++D +LK R G+ N +G Y YE + SK +PDP
Sbjct: 541 IDTGTKIIPVLEGAFGER-FSPPANIIDAILKDDRKGRKNNRGFYLYETKGRKSKKRPDP 599
Query: 592 SVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDAS 651
+V P++ R S + + +++ E + ++NE+ R +E I+ A D D +
Sbjct: 600 AVYPLLGIGRPQSRL---------SAQQVAERCVMMMLNEAARCFDEQIIRSARDGDIGA 650
Query: 652 VLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
V G+ FP + GG + D +GA V L++ + +G F P L A +G
Sbjct: 651 VFGIGFPPFLGGPFRYMDTIGAGEVAAILQRLAAQFGPRFTPCDTLLRMAEQG 703
>gi|420326498|ref|ZP_14828249.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
CCH060]
gi|391250015|gb|EIQ09238.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
CCH060]
Length = 714
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 230/715 (32%), Positives = 364/715 (50%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAIITIDVPDEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTVQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S +EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTTLEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTKGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R ++E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCVDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>gi|293415633|ref|ZP_06658276.1| fatty oxidation complex [Escherichia coli B185]
gi|291433281|gb|EFF06260.1| fatty oxidation complex [Escherichia coli B185]
Length = 714
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 230/715 (32%), Positives = 363/715 (50%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDHPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R ++E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCVDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>gi|417286296|ref|ZP_12073585.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TW07793]
gi|386249755|gb|EII95924.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TW07793]
Length = 714
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 228/715 (31%), Positives = 366/715 (51%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKVEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DI + A + ++ +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADIKMIGNCKTAQEAEVLARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM++ K + +++ KLG++D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMIITGKQLRAKQAVKLGVVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L ++FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASTEVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPRGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCATHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G + ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIMPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R L+E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCLDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E + +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCDRLVEMSERG 702
>gi|386035884|ref|YP_005955797.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae KCTC 2242]
gi|424831674|ref|ZP_18256402.1| fatty oxidation complex, alpha subunit FadJ [Klebsiella pneumoniae
subsp. pneumoniae Ecl8]
gi|339763012|gb|AEJ99232.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae KCTC 2242]
gi|414709109|emb|CCN30813.1| fatty oxidation complex, alpha subunit FadJ [Klebsiella pneumoniae
subsp. pneumoniae Ecl8]
Length = 714
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 235/714 (32%), Positives = 371/714 (51%), Gaps = 36/714 (5%)
Query: 8 MEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGG 64
+EV D +A+IT+ P +N L + ++ + V+ +V ++ F G
Sbjct: 9 LEVRADKIAVITIDAPGEKMNTLKAEFGSQVRGLIRQLRDDKSVRGVVFISAKADNFIAG 68
Query: 65 FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
DIN+ + A + + +++ I P++AA+ G LGGGLELA+ CH RI
Sbjct: 69 ADINMIARCRSAQEAEALARQGQQIMAE-IHGLSIPVIAAIHGACLGGGLELALACHGRI 127
Query: 125 AA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDA 179
+ KT+LGLPE+ LG++PG TQRLPRL+G+S A++MML K + + K GL+D
Sbjct: 128 CSDDEKTRLGLPEVQLGLLPGSGGTQRLPRLIGVSTALDMMLTGKQLRPRQALKAGLVDE 187
Query: 180 VVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLK--LARLQAKKTAPN 237
VV LL+ A+++A + +P R + +++ + R +L + + +KT N
Sbjct: 188 VVPQAILLQA----AVELALKGRPTSREVPVRERVLAGPLGRHLLFQFVGKQTQRKTQGN 243
Query: 238 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 297
P + L V+E G+ HG SG +EA+ F EL M S+ L +FFA K P +
Sbjct: 244 YPAVKRILQVVENGLAHGCSSGYAEEARAFGELAMSQQSQALRSIFFASTDLKKDPG-AE 302
Query: 298 IGLKPRGVRKVAVIGGGLMGSGIATAHILNN-IYVVLKEVNSEYLLKGIKTIEANVRGLV 356
G P +R VAV+GGGLMG GIA + V +K++ + +K + V
Sbjct: 303 AGPGP--LRSVAVLGGGLMGGGIAYVTACKGGLPVRIKDIQPRGINHALKYSWDLLNKQV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
+ +L + + + ++ G DY F D+VIEAV E + LKQ++ SE+E+ P I
Sbjct: 361 RQRRLRPVERDRQMALISGTTDYQGFAHRDVVIEAVFEDLALKQRMVSEVEQYGGPQTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + S ++IG HFFSP MPL+E++ + T Q I ++ + K
Sbjct: 421 ASNTSSLPIGDIAAHASRPGQVIGLHFFSPVEKMPLVEVIPHKGTDPQTIATVVQLAKRQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A L+ G + ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVADKAGFYVNRILAPYINEAMRLLVEGEPIEVIDNALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTYE---KGSKPKPDP 591
+ AF +R F P ++D +LK R G+ N +G Y YE + SK +PDP
Sbjct: 541 IDTGTKIIPVLESAFGER-FSPPANIIDAILKDDRKGRKNNRGFYLYETKGRKSKKRPDP 599
Query: 592 SVLPIIEECRRLSNIMPGGKPIS-VTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDA 650
+V P++ G+P S ++ +++ E + ++NE+ R +E I+ A D D
Sbjct: 600 AVYPLLGI----------GRPQSRLSAQQVAERCVMMMLNEAARCFDEQIIRSARDGDIG 649
Query: 651 SVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D +GA V L++ + +G F P L A +G
Sbjct: 650 AVFGIGFPPFLGGPFRYMDTIGAGEVAAILQRLAAQFGPRFTPCDTLLRMAEQG 703
>gi|188496359|ref|ZP_03003629.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
53638]
gi|188491558|gb|EDU66661.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
53638]
Length = 714
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 230/715 (32%), Positives = 365/715 (51%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAIITIDVPDEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++ + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELVKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGKRVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R ++E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCVDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E + +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMSKRG 702
>gi|432661576|ref|ZP_19897220.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE111]
gi|431199313|gb|ELE98066.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE111]
Length = 714
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 230/715 (32%), Positives = 364/715 (50%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++ + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELVKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R L+E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCLDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E + +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMSKRG 702
>gi|407789605|ref|ZP_11136705.1| multifunctional fatty acid oxidation complex subunit alpha
[Gallaecimonas xiamenensis 3-C-1]
gi|407206265|gb|EKE76223.1| multifunctional fatty acid oxidation complex subunit alpha
[Gallaecimonas xiamenensis 3-C-1]
Length = 717
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 251/715 (35%), Positives = 355/715 (49%), Gaps = 37/715 (5%)
Query: 12 NDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSGGFDIN 68
DG+ IIT+ P +N L ++ + VK +VL +G G F G DI
Sbjct: 12 EDGIGIITMDVPGESMNTLKAAFAEEIRAILADIRHDPAVKGLVLVSGKQGSFIAGADIG 71
Query: 69 VFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP- 127
+ K + D + + L E K P++AA+ G LGGGLELAM CH R+A+
Sbjct: 72 MLDKCESSQDAEALSKAGHAICAEL-ESLKVPLIAAIHGPCLGGGLELAMACHGRVASDW 130
Query: 128 -KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS 183
KT LGLPE+ LG++PG TQRLPRLVG+ KA++MML K + + K GL+D VV
Sbjct: 131 DKTALGLPEVQLGLLPGSGGTQRLPRLVGIQKALDMMLTGKQLRPAQAKKAGLVDEVVPQ 190
Query: 184 EELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEARE--------VLKLARLQA-KKT 234
LL V A+ +A + KP L KLG + E V AR KKT
Sbjct: 191 SILLDV----AIGLAKKGKP----LRDGVKLGFKDKLLEDNGVGRNIVFDQARKTVLKKT 242
Query: 235 APNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPN 294
+ P L+ + G+ G +G+ EAK F ELV S+ L +FFA K
Sbjct: 243 GGHYPAPLKILECVRVGMTDGMDAGLAVEAKYFGELVKTPESKQLRGLFFATTQMKKETG 302
Query: 295 VTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEANVR 353
G+ PR V K AV+GGGLMG GIA + + V +K++ + + K +
Sbjct: 303 AE--GVTPRKVAKAAVLGGGLMGGGIANVTVTKAGVPVRIKDIGEQGISHAFKYSYDLLM 360
Query: 354 GLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPH 413
V R L + +A + ML G Y F DVD+V+EAV E + LK ++ ++E C P
Sbjct: 361 KKVKRRHLRKSQAQKQMMMLTGDTQYRGFHDVDIVVEAVFEDLALKHQMVKDIETHCGPE 420
Query: 414 CILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVG 473
I A+NTS++ + + E + +IG H+FSP MPL EI+ ++TS Q I +
Sbjct: 421 TIFASNTSSLPIGQIAEAAQRPENVIGLHYFSPVDKMPLAEIIAHDKTSPQTIATTVAFA 480
Query: 474 KIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLD 533
+ K P+VV + GF VNR Y A L+ G V ++D A+ +FG+P+GP LLD
Sbjct: 481 RRQGKTPIVVKDGAGFYVNRILGLYMNEAAYLLMEGEPVEKLDKALTAFGMPVGPMTLLD 540
Query: 534 LAGYGVAAATSKEFDKAFPDRSFQSPLV-DLLLKSGRNGKANGKGLYTYE---KGSKPKP 589
G V A + +K +R FQ+P D LL GR GK + KG Y Y+ K P
Sbjct: 541 EVGIDVGAKIAPILEKELGER-FQAPAAFDKLLADGRKGKKSQKGFYLYKDLPKSWNPLK 599
Query: 590 DPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
P+ E R+ I P G+ + I E L ++NE+ R L+EGI+ A D D
Sbjct: 600 KLPKKPVDESVYRVLGISPAGR---LDLDAIAERTLLQMLNEAARCLDEGIIQSARDGDI 656
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
++ G+ FP + GG + D +GA V L+ +G F PS L + A G
Sbjct: 657 GAIFGIGFPPFLGGPFRYMDKLGAKAVVAKLEALKAQHGERFAPSPLLVKMAEDG 711
>gi|422834500|ref|ZP_16882561.1| fatty acid oxidation complex subunit alpha [Escherichia coli E101]
gi|371601292|gb|EHN90042.1| fatty acid oxidation complex subunit alpha [Escherichia coli E101]
Length = 714
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 230/715 (32%), Positives = 363/715 (50%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLEL + CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELVLACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS + + E + ++NE+ R ++E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLSAPL------------VAERCVMLMLNEAVRCVDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>gi|152971261|ref|YP_001336370.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
gi|166972673|sp|A6TC19.1|FADJ_KLEP7 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|150956110|gb|ABR78140.1| bifunctional fatty acid oxidation complex protein: putative
enoyl-CoA hydratase/isomerase/putative NAD(P)-binding
dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
Length = 714
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 234/714 (32%), Positives = 369/714 (51%), Gaps = 36/714 (5%)
Query: 8 MEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGG 64
+EV D +A+IT+ P +N L + ++ + V+ +V ++ F G
Sbjct: 9 LEVRADKIAVITIDAPGEKMNTLKAEFGSQVRGLIRQLRDDKSVRGVVFISAKADNFIAG 68
Query: 65 FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
DIN+ + A + + +++ I P++AA+ G LGGGLELA+ CH RI
Sbjct: 69 ADINMIARCRSAQEAEALARQGQQIMAE-IHGLSIPVIAAIHGACLGGGLELALACHGRI 127
Query: 125 AA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDA 179
+ KT+LGLPE+ LG++PG TQRLPRL+G+S A++MML K + + K GL+D
Sbjct: 128 CSDDEKTRLGLPEVQLGLLPGSGGTQRLPRLIGVSTALDMMLTGKQLRPRQALKAGLVDE 187
Query: 180 VVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLK--LARLQAKKTAPN 237
VV LL+ A+++A + +P R + +++ + R +L + + +KT N
Sbjct: 188 VVPQAILLQA----AVELALKGRPTSREVPVRERVLAGPLGRHLLFQFVGKQTQRKTQGN 243
Query: 238 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 297
P + L V+E G+ HG SG +EA+ F EL M S+ L +FFA K P
Sbjct: 244 YPAVKRILQVVENGLAHGCSSGYAEEARAFGELAMSPQSQALRSIFFASTDLKKDPGAE- 302
Query: 298 IGLKPRGVRKVAVIGGGLMGSGIATAHILNN-IYVVLKEVNSEYLLKGIKTIEANVRGLV 356
P +R VAV+GGGLMG GIA + V +K++ + +K + V
Sbjct: 303 --AGPGSLRSVAVLGGGLMGGGIAYVTACKGGLPVRIKDIQPRGINHALKYSWDLLNKQV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
+ +L + + + ++ G DY F D+VIEAV E + LKQ++ SE+E+ P I
Sbjct: 361 RQRRLRPVERDRQMALISGTTDYQGFAHRDVVIEAVFEDLALKQRMVSEVEQYGGPQTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + S ++IG HFFSP MPL+E++ + T Q I ++ + K
Sbjct: 421 ASNTSSLPIGDIAAHASRPGQVIGLHFFSPVEKMPLVEMIPHKGTDPQTIATVVQLAKRQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A L+ G + ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVADKAGFYVNRILAPYINEAMRLLVEGEPIEVIDNALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTYE---KGSKPKPDP 591
+ AF +R F P ++D +LK R G+ N +G Y YE + SK +PDP
Sbjct: 541 IDTGTKIIPVLESAFGER-FSPPANIIDAILKDDRKGRKNNRGFYLYETKGRKSKKRPDP 599
Query: 592 SVLPIIEECRRLSNIMPGGKPIS-VTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDA 650
+V P++ G+P S ++ +++ E + ++NE+ R +E I+ A D D
Sbjct: 600 AVYPLLGI----------GRPQSRLSAQQVAERCVMMMLNEAARCFDEQIIRSARDGDIG 649
Query: 651 SVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D +GA V L++ + +G F P L A +G
Sbjct: 650 AVFGIGFPPFLGGPFRYMDTIGAGEVAAILQRLAAQFGPRFTPCDTLLRMAEQG 703
>gi|326429421|gb|EGD74991.1| trifunctional enzyme subunit alpha [Salpingoeca sp. ATCC 50818]
Length = 751
Score = 339 bits (870), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 242/726 (33%), Positives = 359/726 (49%), Gaps = 41/726 (5%)
Query: 6 VTMEVGNDGVAIIT--LINPPVNALAIPIVAGLKDKFEEATSRDDVKA-IVLTGNGGRFS 62
V E+ +DG+AI+T L VN L + + K S V+A ++++G F
Sbjct: 31 VRYEIEDDGIAIVTFDLQGTKVNTLNMDLADEFKGVMSTLESDPKVRAAVIMSGKEDNFI 90
Query: 63 GGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHA 122
G DIN+F K A ++ + S + L KP VAA+ G LGGGLELA+ CH
Sbjct: 91 AGADINMFTKCKTAEEMENLSRPSHAMFDQLASG--KPKVAAINGSCLGGGLELALACHY 148
Query: 123 RIAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 177
R+A+ PKT LGLPE+ LG++PG TQRLP L+GL A+ +ML K++ + ++ L+
Sbjct: 149 RVASSSPKTVLGLPEVMLGILPGAGGTQRLPALIGLQNAMPLMLTGKNVKPSKAKRMKLV 208
Query: 178 DAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 237
D V L + L A +A R KL +++ E + R A K A +
Sbjct: 209 DNVADPSALKHAAVLAAKGLADGTLKVDREPKGVQKL--INKVIEGTEFGRNFAFKKARD 266
Query: 238 MPQHQA---------CLDVIEEGIVHGGYS--GVLKEAKVFKELVMLDTSRGLVHVFFAQ 286
M Q +DV+E HG S G EAK F EL M SR LV ++F Q
Sbjct: 267 MVMKQTKGVYPAPLKIIDVLETSAKHGFCSKAGYEAEAKAFGELGMTPESRALVSIYFGQ 326
Query: 287 RATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIK 346
A K P G R V V+G GLMG+GIA + + ++LK+ E L +G+
Sbjct: 327 TACKKNP----YGKPKRKENTVGVLGAGLMGAGIAEVTMTKGVDILLKDAKPEGLARGLD 382
Query: 347 TIEANVRGLVTRGKLTQDKANNALKMLKGVLD-----YSEFKDVDMVIEAVIESVPLKQK 401
I N+ + ++T + + + + G+ D F DM+IEAV E++ LK K
Sbjct: 383 QIYKNLNKKTKKRRMTTFERDQTMSRIVGLTDSDANWQKHFSHADMIIEAVFENLELKHK 442
Query: 402 IFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERT 461
I + E P HC+ ATNTS I + + E +S ++ IG H+FSP MPLLEI+R T
Sbjct: 443 IIKQFEAITPAHCVFATNTSAIPITKLAEASSRPEQFIGMHYFSPVDKMPLLEIIRHPGT 502
Query: 462 SAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRS 521
S + +G K +VV + GF VNR PYS A ++ G + ID A+
Sbjct: 503 SDETTARAYDMGLKQGKTVIVVKDVPGFYVNRCLGPYSDEAMAVLLDGASIEEIDRAMVK 562
Query: 522 FGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKANGKGLY 579
+G P+GP L+D G AA+ K +R + L++ ++ G G+ GKGL+
Sbjct: 563 YGYPVGPMTLVDEVGIDTAASVGKTLQGDLGERIGTADPELLEKVVAKGFLGRKTGKGLH 622
Query: 580 TYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPIS-VTEKEIVEMILFP-VVNESCRVLE 637
+ K +P V+ +IEE R+L GKP S +T E ++M L VNE+ L+
Sbjct: 623 IFPPRGKKTVNPEVVEMIEEQRKLR-----GKPSSGLTSVEDIQMRLVSRFVNETALCLQ 677
Query: 638 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 697
I+ D +V G+ FP +RGG DA GA+ + ++ G F+P++ L
Sbjct: 678 HDIIGSPVVGDIGAVFGIGFPPFRGGPFRLVDAFGADKFVDMMLRYRDALGPQFEPAQIL 737
Query: 698 EERATK 703
++ A +
Sbjct: 738 KDYAKQ 743
>gi|415778407|ref|ZP_11489453.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli 3431]
gi|315615610|gb|EFU96242.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli 3431]
Length = 714
Score = 339 bits (870), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 228/713 (31%), Positives = 363/713 (50%), Gaps = 33/713 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I ++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIQVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKERPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPLSQALRSIFFASTDVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA I V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTQGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDAS 651
++ P+I G+ ++ ++ E + ++NE+ R ++E ++ D D +
Sbjct: 600 AIYPLI-------GTQGQGR---ISAPQVAERCVMLMLNEAVRCVDEQVIRSVRDGDIGA 649
Query: 652 VLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 650 VFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>gi|387612915|ref|YP_006116031.1| fatty acid oxidation complex alpha subunit [includes: enoyl-CoA
hydratase; 3-hydroxyacyl-CoA dehydrogenase;
3-hydroxybutyryl-CoA epimerase] [Escherichia coli ETEC
H10407]
gi|309702651|emb|CBJ01980.1| fatty acid oxidation complex alpha subunit [includes: enoyl-CoA
hydratase; 3-hydroxyacyl-CoA dehydrogenase;
3-hydroxybutyryl-CoA epimerase] [Escherichia coli ETEC
H10407]
Length = 714
Score = 339 bits (870), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 228/713 (31%), Positives = 362/713 (50%), Gaps = 33/713 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I ++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIQVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKERPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA I V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTQGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSGPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDAS 651
++ P+I G+ ++ ++ E + ++NE+ R ++E ++ D D +
Sbjct: 600 AIYPLI-------GTQGQGR---ISAPQVAERCVMLMLNEAVRCVDEQVIRSVRDGDIGA 649
Query: 652 VLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 650 VFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>gi|301647554|ref|ZP_07247352.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
146-1]
gi|301074302|gb|EFK89108.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
146-1]
Length = 714
Score = 339 bits (870), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 228/713 (31%), Positives = 363/713 (50%), Gaps = 33/713 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I ++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIQVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKERPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA I V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDITAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTQGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDAS 651
++ P+I G+ ++ ++ E + ++NE+ R ++E ++ D D +
Sbjct: 600 AIYPLI-------GTQGQGR---ISAPQVAERCVMLMLNEAVRCVDEQVIRSVRDGDIGA 649
Query: 652 VLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 650 VFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>gi|359394875|ref|ZP_09187928.1| hypothetical protein KUC_1526 [Halomonas boliviensis LC1]
gi|357972122|gb|EHJ94567.1| hypothetical protein KUC_1526 [Halomonas boliviensis LC1]
Length = 699
Score = 339 bits (870), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 218/681 (32%), Positives = 367/681 (53%), Gaps = 28/681 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+AIITL NPPVN+ + G+ ++ ++ +A+VL G G G D+ +++
Sbjct: 22 IAIITLDNPPVNSSNDAVRRGILAALDKIDTQQ-CRAVVLMGKGPNLMAGADL---RELE 77
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
+P V+ L + P++A + G LGGGLELA+ C +RIA P LGLP
Sbjct: 78 NEPTEPTLPQVTAALSAFPL-----PVIAVISGHTLGGGLELALACDSRIATPTALLGLP 132
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 191
E+T+GVIPG TQRLPR+VGL+KA+EM++ K IT+ + K+GL+D ++ + E + S
Sbjct: 133 EVTVGVIPGAGGTQRLPRVVGLAKALEMIVSGKPITALDAHKVGLVDELLHATEG-EASD 191
Query: 192 LWALD----IAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDV 247
A D A R + + L D + +A +V ++ +L A+ +P +V
Sbjct: 192 TEAFDQVLAYANRYQGGKQPLAERDVPPADEQALQV-QVNKLLARTR--GLPAAPVAAEV 248
Query: 248 IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRK 307
+ + H +G+ E F L ++++ L ++FFA+R P ++ V +
Sbjct: 249 VMQAATHSFSAGIADERAQFLALRGSESAQALRYLFFAEREKPFEPTQH---VQAAQVSR 305
Query: 308 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 367
++V+G G MGSGIA + V L E+N + L G+ I + V R LTQ + +
Sbjct: 306 ISVVGAGTMGSGIALCALNAGYSVDLLELNDKALEAGVARITQALDEGVKRQLLTQAQRD 365
Query: 368 NALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 427
++L LK E D+VIEA++E + +K+ +F++L K +LA+NTS +D++
Sbjct: 366 SSLSRLKPTQQLPEVAGTDLVIEAIVEDLAIKRSLFADLAKWVSESTLLASNTSYLDIDQ 425
Query: 428 VGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 487
+ E +R++G HFFSPA MPL+EIVR + TS Q + ++V + +KK +VV N
Sbjct: 426 IAEGIPHPERVLGLHFFSPADRMPLMEIVRCQITSEQTLSTAVSVARRLKKKAIVVANSW 485
Query: 488 GFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEF 547
GF NR + Y + ++ G +ID+A+ ++G +GPF++ D++G +A ++
Sbjct: 486 GFVGNRLYAAYRRQCEFMLEEGASPEQIDAALEAYGFAMGPFKVADMSGLDIAWKMRQQT 545
Query: 548 DKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIM 607
R + + DL+ ++GR G+ G G Y Y+ +P DP V +I R I
Sbjct: 546 ADTRHLRRYVG-IPDLICEAGRLGRKTGSGYYRYDNTMQPASDPKVAQLIAHYREEHAIT 604
Query: 608 PGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFW 667
P + +E++I + + ++NE+ +LEEG+ R +D+D A V G FP +RGG +F
Sbjct: 605 PQ----AFSEQDIQQRAVHALINEALLLLEEGVCQRPADIDIALVNGYGFPRWRGGPLFI 660
Query: 668 ADAVGANYVYTSLKKWSQLYG 688
A + + + ++L K +++ G
Sbjct: 661 AQQMSGDELASALDKLAEVSG 681
>gi|425082566|ref|ZP_18485663.1| fatty acid oxidation complex subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae WGLW2]
gi|428936275|ref|ZP_19009694.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae JHCK1]
gi|405600818|gb|EKB73983.1| fatty acid oxidation complex subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae WGLW2]
gi|426298678|gb|EKV61066.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae JHCK1]
Length = 714
Score = 339 bits (870), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 234/713 (32%), Positives = 369/713 (51%), Gaps = 34/713 (4%)
Query: 8 MEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGG 64
+EV D +A+IT+ P +N L + ++ + V+ +V ++ F G
Sbjct: 9 LEVRADKIAVITIDAPGEKMNTLKAEFGSQVRGLIRQLRDDKSVRGVVFISAKADNFIAG 68
Query: 65 FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
DIN+ + A + + +++ I P++AA+ G LGGGLELA+ CH RI
Sbjct: 69 ADINMIARCRSAQEAEALARQGQQIMAE-IHGLPIPVIAAIHGACLGGGLELALACHGRI 127
Query: 125 AA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDA 179
+ KT+LGLPE+ LG++PG TQRLPRL+G+S A++MML K + + K GL+D
Sbjct: 128 CSDDEKTRLGLPEVQLGLLPGSGGTQRLPRLIGVSTALDMMLTGKQLRPRQALKAGLVDE 187
Query: 180 VVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLK--LARLQAKKTAPN 237
VV LL+ A+++A + +P R + +++ + R +L + + +KT N
Sbjct: 188 VVPQAILLQA----AVELALKGRPTSREVSVRERVLAGPLGRHLLFQFVGKQTQRKTQGN 243
Query: 238 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 297
P + L V+E G+ HG SG +EA+ F EL M S+ L +FFA K P +
Sbjct: 244 YPAVKRILQVVENGLAHGCSSGYAEEARAFGELAMSPQSQALRSIFFASTDLKKDPG-AE 302
Query: 298 IGLKPRGVRKVAVIGGGLMGSGIATAHILNN-IYVVLKEVNSEYLLKGIKTIEANVRGLV 356
G P +R VAV+GGGLMG GIA + V +K++ + +K + V
Sbjct: 303 AGPGP--LRSVAVLGGGLMGGGIAYVTACKGGLPVRIKDIQPRGINHALKYSWDLLNKQV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
+ +L + + + ++ G DY F D+VIEAV E + LKQ++ SE+E+ P I
Sbjct: 361 RQRRLRPVERDRQMALISGTTDYQGFAHRDVVIEAVFEDLALKQRMVSEVEQYGGPQTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + S ++IG HFFSP MPL+E++ + T Q I ++ + K
Sbjct: 421 ASNTSSLPIGDIAAHASRPGQVIGLHFFSPVEKMPLVEVIPHKGTDPQTIATVVQLAKRQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A L+ G + ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVADKAGFYVNRILAPYINEAMRLLVEGEPIEVIDNALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTYE---KGSKPKPDP 591
+ AF +R F P ++D +LK R G+ N +G Y YE + SK +PDP
Sbjct: 541 IDTGTKIIPVLEGAFGER-FSPPANIIDAILKDDRKGRKNNRGFYLYETKGRKSKKRPDP 599
Query: 592 SVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDAS 651
+V P++ R S + + +++ E + ++NE+ R +E I+ A D D +
Sbjct: 600 AVYPLLGIGRPQSRL---------SAQQVAERCVMMMLNEAARCFDEQIIRSARDGDIGA 650
Query: 652 VLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
V G+ FP + GG + D +GA V L++ + +G F P L A +G
Sbjct: 651 VFGIGFPPFLGGPFRYMDTIGAGEVAAILQRLAAQFGPRFTPCDTLLRMAEQG 703
>gi|89053167|ref|YP_508618.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Jannaschia sp. CCS1]
gi|88862716|gb|ABD53593.1| 3-hydroxyacyl-CoA dehydrogenase [Jannaschia sp. CCS1]
Length = 687
Score = 339 bits (870), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 237/714 (33%), Positives = 360/714 (50%), Gaps = 58/714 (8%)
Query: 13 DGV-AIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DG+ +TL NP VNA+ + GL D A + + IV + +
Sbjct: 8 DGLTGFVTLDNPSVNAIGRAMREGLMDAVAWAETEMLDRVIVTGAGRAFAA----GADAK 63
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ GA +PDV ++ IE P +AA+ G+ALGGG E+A+ C RI P+ Q+
Sbjct: 64 EFDGAALEPYLPDV-----LDAIERSFVPWIAAINGVALGGGAEIALACRMRIMGPRAQI 118
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAV-------- 180
GLPE+TLGVIPG TQR RL GL A+EM+ K + ++ GL+ AV
Sbjct: 119 GLPEVTLGVIPGAGGTQRAMRLCGLDTALEMIAYGKPLGAKAALATGLVHAVEEDPVDAA 178
Query: 181 --VTSEELLKVSRLWAL---DIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTA 235
V SEELL + W L D+ A D + E LA+ + A
Sbjct: 179 DMVNSEELLCIVPTWELPAPDMNA------------DAFAKIREG-----LAKRSKGQVA 221
Query: 236 PNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV 295
P ++VIE G+ + E F EL D SR L H+FF++RA +K PN
Sbjct: 222 P-----LKAVEVIEAGLSMEFADAMALERAAFLELKAGDQSRALRHMFFSERA-AKAPN- 274
Query: 296 TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGL 355
D+ P + K+A++GGG MG+GIA A + + VVL E +++ + + I+ +
Sbjct: 275 -DLPKAPE-ISKIAIVGGGTMGAGIAYACLSVGLPVVLLETDADAIARAQHNIDTLIGAG 332
Query: 356 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCI 415
+ RG+L A L DY+ D +VIEA ES+ +K+ IF++L+ A P +
Sbjct: 333 LKRGRLDDSGAAALRDRLTLTEDYAAASDATLVIEAAFESMDVKKDIFAKLDAAVSPDTV 392
Query: 416 LATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKI 475
LATNTS +D++++ T RI+G HFF+PAH+M LLEIV TS + + + K+
Sbjct: 393 LATNTSYLDVDVLAASTRDPSRILGLHFFAPAHIMRLLEIVTGAETSDRALATGYALAKL 452
Query: 476 IKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLA 535
+KKVPV+ G C GF NR F Y + A +L+ G + +D A+ +FG +GPF++ DL+
Sbjct: 453 LKKVPVLAGVCDGFIGNRIFSRYKEEADILLMDGAVPWEVDDAMEAFGYAMGPFEVGDLS 512
Query: 536 GYGVAAATSKEFDKAF-PDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVL 594
G + A + D P+R + P+ D ++ GR G+ G Y Y G DP +
Sbjct: 513 GLDIGFANRRRQDATRDPNRRY-IPIADRMVNEGRLGRKASVGWYRYPGGGGKVIDPLIE 571
Query: 595 PIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLG 654
+I E + G + ++ +VE +L ++NE+ +L EGI A+D+D +V G
Sbjct: 572 DLIAEEAHFA----GATRTEIADEVVVERLLLAMINEAADILGEGIARSAADIDLVTVFG 627
Query: 655 MSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLS 708
FP +RGG++ +AD G + L+ + +K S L + A G L+
Sbjct: 628 YGFPRWRGGLMHYADTRGVAQIVEKLRSLEAVDPVIWKVSPVLLDCAQTGTKLA 681
>gi|33601749|ref|NP_889309.1| enoyl-CoA hydratase [Bordetella bronchiseptica RB50]
gi|33576186|emb|CAE33265.1| Putative enoyl-CoA isomerase [Bordetella bronchiseptica RB50]
Length = 694
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 228/697 (32%), Positives = 352/697 (50%), Gaps = 31/697 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSGGFDINVFQKV 73
+ ++TL + PVNAL + GL E+ +R DV+A++L + G FS G DI F +
Sbjct: 11 IGVVTLDSAPVNALGRTLRHGLAQCLEQVYARPDVRALLLVSARPGIFSAGADIKEFDQA 70
Query: 74 HGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGL 133
D L EL+ + IE+ P+VA ++G ALGG LELA+GCH R+A+P+ LGL
Sbjct: 71 GSDQDAGL-----AELI-DRIENAPVPVVALLDGAALGGALELALGCHYRLASPRASLGL 124
Query: 134 PELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVS 190
PE+ LG++PG TQRLPRLVG +A+EM+L + + E + L DA++++++ L+ +
Sbjct: 125 PEIKLGLLPGAGGTQRLPRLVGARQAVEMVLGGEPVGGETALRYKLADALLSADDTLEQA 184
Query: 191 RLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 250
W R P + R L +L+ A A P +
Sbjct: 185 LAWM-----RNAPGGLARRRVASLPALAPASIAEAAR---AAAIRPVGSAAAREAALACL 236
Query: 251 GIVHGGY-SGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 309
G + +G E + F L +R L + FFA+R +V+ R + +VA
Sbjct: 237 AAAQGPFDAGRALERESFARLRDGAEARALRYAFFAERPRPPAGDVS-----ARRIEQVA 291
Query: 310 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 369
V+G G MG+GI + V+ +V+++ L +G + + L R +LT +A
Sbjct: 292 VVGAGTMGTGIVICLADAGLPVIWHDVDADRLAQGRAQVCQHFERLAARKRLTSRQAEQR 351
Query: 370 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 429
+ + + + D+ IEAV E + +K +F EL++ P IL TNTST+D++ +
Sbjct: 352 VAAVATTGEMAGIAQADLAIEAVFEDMAVKCAVFRELDRVLKPGAILGTNTSTLDVDRIA 411
Query: 430 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 489
T ++G HFFSPA VMPLLEIVR T A V+ + + ++K VV G C GF
Sbjct: 412 HSTRRPQDVVGLHFFSPAPVMPLLEIVRGAATHADVVAAAQGLARRLRKTAVVAGVCDGF 471
Query: 490 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDK 549
NR + Y + A L+V G +D+A+R +G +GPFQ+ DLAG V +
Sbjct: 472 IGNRMWHQYLRQAALMVHEGAMPMEVDAALRDWGFAMGPFQVADLAGLDVGDSIRLRQRS 531
Query: 550 AFPDRSFQSPLVDLLLKSGRNGKANGKGLYTY-EKGSKPKPDPSVLPIIEECRRLSNIMP 608
P R + L D + +GR G G G++ Y + G +P+ D V +I R + +
Sbjct: 532 EMPHRPWPDWL-DRVSAAGRLGLKGGSGIHAYPDGGRQPRRDAEVEAMIAAASREAGV-- 588
Query: 609 GGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWA 668
++ EIVE L +V E+ R+LEEGI A+D+D + G FP +RGG A
Sbjct: 589 --SRRAIAADEIVERCLHALVVEAARLLEEGIAASATDVDAVFLAGYGFPRWRGGPCHSA 646
Query: 669 DAVGANYVYTSLKKWSQLYG-NFFKPSRFLEERATKG 704
DA+G V L++ + F++P L A +G
Sbjct: 647 DAMGLPAVVAGLRRRAATAEPEFWQPPGLLVRLAAQG 683
>gi|422780740|ref|ZP_16833525.1| fatty oxidation complex [Escherichia coli TW10509]
gi|323977458|gb|EGB72544.1| fatty oxidation complex [Escherichia coli TW10509]
Length = 714
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 234/715 (32%), Positives = 365/715 (51%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRTIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEELARQGQQLMAE-IHALPVPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ + PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCSDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + R L +++ G L A + + +KT
Sbjct: 187 DVVPQSILLE----SAVELAKHDRLSSRPLPVRERILAGPLGRALLFKMVGKKTEQKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+VIE G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATKRILEVIETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQK+ +E+E C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQKMVAEVEGNCATHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ ++ + S +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPISDIAAHASRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGPKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R L+E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMMMLNEAVRCLDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + DA+GA V +++ + YG+ F P L E + +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDALGAAEVVAIMQRLTARYGSRFTPCDRLVEMSERG 702
>gi|425075588|ref|ZP_18478691.1| fatty acid oxidation complex subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae WGLW1]
gi|425086224|ref|ZP_18489317.1| fatty acid oxidation complex subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae WGLW3]
gi|449060359|ref|ZP_21738019.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae hvKP1]
gi|405593988|gb|EKB67411.1| fatty acid oxidation complex subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae WGLW1]
gi|405605139|gb|EKB78205.1| fatty acid oxidation complex subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae WGLW3]
gi|448873926|gb|EMB08993.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae hvKP1]
Length = 714
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 234/713 (32%), Positives = 369/713 (51%), Gaps = 34/713 (4%)
Query: 8 MEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGG 64
+EV D +A+IT+ P +N L + ++ + V+ +V ++ F G
Sbjct: 9 LEVRADKIAVITIDAPGEKMNTLKAEFGSQVRGLIRQLRDDKSVRGVVFISAKADNFIAG 68
Query: 65 FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
DIN+ + A + + +++ I P++AA+ G LGGGLELA+ CH RI
Sbjct: 69 ADINMIARCRSAQEAEALARQGQQIMAE-IHGLSIPVIAAIHGACLGGGLELALACHGRI 127
Query: 125 AA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDA 179
+ KT+LGLPE+ LG++PG TQRLPRL+G+S A++MML K + + K GL+D
Sbjct: 128 CSDDEKTRLGLPEVQLGLLPGSGGTQRLPRLIGVSTALDMMLTGKQLRPRQALKAGLVDE 187
Query: 180 VVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLK--LARLQAKKTAPN 237
VV LL+ A+++A + +P R + +++ + R +L + + +KT N
Sbjct: 188 VVPQAILLQA----AVELALKGRPTSREVPVRERVLAGPLGRHLLFQFVGKQTQRKTQGN 243
Query: 238 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 297
P + L V+E G+ HG SG +EA+ F EL M S+ L +FFA K P +
Sbjct: 244 YPAVKRILQVVENGLAHGCSSGYAEEARAFGELAMSPQSQALRSIFFASTDLKKDPG-AE 302
Query: 298 IGLKPRGVRKVAVIGGGLMGSGIATAHILNN-IYVVLKEVNSEYLLKGIKTIEANVRGLV 356
G P +R VAV+GGGLMG GIA + V +K++ + +K + V
Sbjct: 303 AGPGP--LRSVAVLGGGLMGGGIAYVTACKGGLPVRIKDIQPRGINHALKYSWDLLNKQV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
+ +L + + + ++ G DY F D+VIEAV E + LKQ++ SE+E+ P I
Sbjct: 361 RQRRLRPVERDRQMALISGTTDYQGFAHRDVVIEAVFEDLALKQRMVSEVEQYGGPQTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + S ++IG HFFSP MPL+E++ + T Q I ++ + K
Sbjct: 421 ASNTSSLPIGDIAAHASRPGQVIGLHFFSPVEKMPLVEVIPHKGTDPQTIATVVQLAKRQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A L+ G + ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVADKAGFYVNRILAPYINEAMRLLVEGEPIEVIDNALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTYE---KGSKPKPDP 591
+ AF +R F P ++D +LK R G+ N +G Y YE + SK +PDP
Sbjct: 541 IDTGTKIIPVLEGAFGER-FSPPANIIDAILKDDRKGRKNNRGFYLYETKGRKSKKRPDP 599
Query: 592 SVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDAS 651
+V P++ R S + + +++ E + ++NE+ R +E I+ A D D +
Sbjct: 600 AVYPLLGIGRPQSRL---------SAQQVAERCVMMMLNEAARCFDEQIIRSARDGDIGA 650
Query: 652 VLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
V G+ FP + GG + D +GA V L++ + +G F P L A +G
Sbjct: 651 VFGIGFPPFLGGPFRYMDTIGAGEVAAILQRLAAQFGPRFTPCDTLLRMAEQG 703
>gi|374288523|ref|YP_005035608.1| fatty acid oxidation complex subunit alpha [Bacteriovorax marinus
SJ]
gi|301167064|emb|CBW26643.1| fatty acid oxidation complex subunit alpha [Bacteriovorax marinus
SJ]
Length = 706
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 225/729 (30%), Positives = 373/729 (51%), Gaps = 56/729 (7%)
Query: 1 MAAPRVTMEVGNDGVAIITL---INPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGN 57
M + R++ E+ + +A + + L + L D+ +E D+K +V +
Sbjct: 1 MESKRISFEI-EESIAYLGFGYNCTKSMTTLDEETLQELSDRLDELHKNKDIKGVVFWSH 59
Query: 58 GGR-FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLEL 116
R F G DIN+ + D + + + + N IED K P +AAV G+ LGGGLEL
Sbjct: 60 KDRCFLAGADINLISSMKTESDGASGAEAG-QTIFNKIEDLKVPTIAAVHGVCLGGGLEL 118
Query: 117 AMGCHARIAAPK--TQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEG 171
++ C A +A+ T LGLPE+ LG+IPG T RLPR +GL KA++++L K + +++
Sbjct: 119 SLSCKAIVASDDKGTMLGLPEVKLGLIPGFGGTYRLPRKIGLPKALDVILTGKMLKAKKA 178
Query: 172 WKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLH--RTDKLGSLSEAREVLKLARL 229
+LGL+ V E + K++ S H +K G L E+ E +
Sbjct: 179 KRLGLVAGVYPKERIKKMA----------------SFHFGGDEKKGGLKESLEHIASDNF 222
Query: 230 QAKKTAPNMPQ----------HQA---CLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 276
AKK + +QA LDV+E GI+ G S + E++ F EL + + S
Sbjct: 223 FAKKIIFQKARESVLKKTKGFYQAPLKILDVMEAGIMKGRSSYLAAESQAFGELCVSEQS 282
Query: 277 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 336
+ L H+FF K G PR ++K A +G G MG GIA N + ++K++
Sbjct: 283 KNLQHIFFMTETAKKYSGPESSGNLPR-LKKGAALGAGTMGGGIAWLMANNGMAPLMKDL 341
Query: 337 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 396
E L G K +N G V R ++T+D+ + ++G + Y F+ VD+VIEA++E++
Sbjct: 342 TPEALELGYKQSSSNFMGAVKRKRMTRDEFERKQRSIQGQVGYDGFERVDLVIEAIVENM 401
Query: 397 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 456
+K+ +FSE+E C++ +NTS++ + + + +R G HFF+P H+MPL+EI+
Sbjct: 402 NIKKSVFSEVETKVRKDCVITSNTSSLSVQEMSTALENPERFAGLHFFNPVHMMPLVEII 461
Query: 457 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 516
++ + + + L +KK PV+V + GF VNR P+ A L+ GV + ID
Sbjct: 462 THDKVAPETLEALYNWCMKVKKTPVIVKDGPGFLVNRILMPFMNEAGFLLEEGVPMKDID 521
Query: 517 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGK 576
A +FG+P+GP +LLD G V +K DR SP L++ GK NGK
Sbjct: 522 DACLNFGMPMGPCRLLDEVGIDVGEKVAKIIHDGLGDRVKSSPFSSKLVEKNFLGKKNGK 581
Query: 577 GLYTYEKGSKPK-PDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRV 635
G Y Y+K K + P+ V ++ + ++ + E EI I P++NE+ V
Sbjct: 582 GFYIYDKRGKVEGPNEEVQAMLPKTKK-----------KMDETEIQMRIFLPMINEAATV 630
Query: 636 LEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQ-LYGNFFKPS 694
L +GIV A+ +D + G+ FP +RGG++ +AD+ G + +++ ++ + + + P
Sbjct: 631 LADGIVESAAQVDLGLIFGIGFPPFRGGLLRYADSEGLERLIKAMEDRAESVDKDRYTPC 690
Query: 695 RFLEERATK 703
FL++ A +
Sbjct: 691 DFLKDLAAQ 699
>gi|410639327|ref|ZP_11349876.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola chathamensis S18K6]
gi|410141115|dbj|GAC08063.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola chathamensis S18K6]
Length = 716
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 244/713 (34%), Positives = 371/713 (52%), Gaps = 38/713 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPI---VAGLKDKFEEATSRDDVKAIVLTGNGGRF 61
T+ +DG+AI+++ P +N L + V + D+ E +S V +V++G F
Sbjct: 16 TLTKRDDGIAILSMDVPGETMNTLKVEFGDQVGAMLDQIESDSSIKGV--VVISGKDNSF 73
Query: 62 SGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCH 121
G DI++ A + + + V IED P VAA+ G ALGGGLELA+ CH
Sbjct: 74 VAGADISMLAGCKSAEEAQAIGQGG-QAVFQRIEDMSVPFVAAIHGPALGGGLELALACH 132
Query: 122 ARIAAP--KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGL 176
R+ + KTQLGLPE+ LG++PG TQRLPRL+ + +A++MML ++ +++ K G+
Sbjct: 133 MRVCSDDDKTQLGLPEVQLGLLPGSGGTQRLPRLISVQQAMKMMLTGSAVRAKQAKKYGI 192
Query: 177 IDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSE-----AREVLKLARLQA 231
+D +V LL V A+++A + KP R + D +G E + + K AR Q
Sbjct: 193 VDDMVPRSILLDV----AIEMAKKSKPK-RKPVKLDLMGQFLERTPMGKKLMFKQARKQT 247
Query: 232 K-KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATS 290
+ KT N P + +D IE G+ G G EA+ F LVM S L +FFA
Sbjct: 248 QAKTLGNYPSPERIIDCIETGLEKGNAQGYALEAQHFGHLVMTPESAALRSLFFATTEMK 307
Query: 291 KVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIE 349
K V G+ P ++K+ V+GGGLMG GIA + V +K++ S+ + +K
Sbjct: 308 KENGVE--GVAPNALKKIGVLGGGLMGGGIAFVTATKAKLPVRIKDIRSDGIAHAMKYSY 365
Query: 350 ANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKA 409
+ V R + + + L L G +DY F + D+VIEAV E + LKQ + +++E
Sbjct: 366 DILSKKVKRRFMLHSQMQSQLSRLTGSVDYVGFDNTDVVIEAVFEDLALKQNMVTDVETH 425
Query: 410 CPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDL 469
C H I A+NTS+I + + + +IG H+FSP MPL E++ E TS Q I
Sbjct: 426 CSEHTIFASNTSSIPIGQIAANAKRPENVIGLHYFSPVDKMPLAEVIAHEGTSDQTISTT 485
Query: 470 MTVGKIIKKVPVVVGNCTGFAVNRAFFPY-SQSARLLVSLGVDVFRIDSAIRSFGLPIGP 528
+ + K K P+VV + GF VNR PY ++SA +L++ G + +ID A+ FG P+GP
Sbjct: 486 VELAKKQGKTPIVVKDGAGFYVNRILAPYMNESAEILLA-GEPIEQIDRALVKFGFPVGP 544
Query: 529 FQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK 588
+LLD G V S F +R +P D LL R GK N +G Y YE G KP
Sbjct: 545 IKLLDEVGIDVGTKISPILVAEFGERFSSAPGFDKLLADDRKGKKNKRGFYNYE-GKKPG 603
Query: 589 PDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLD 648
+ + E L +I P + ++E I E + ++NE+ L+EG+V A D D
Sbjct: 604 KE-----VDESVYDLLSITPSSR---LSESTIAERCVLLMLNEAAMCLDEGVVRSARDGD 655
Query: 649 DASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERA 701
++ G+ FP + GG + D++G V L + Q +G+ F P++ L E A
Sbjct: 656 IGAIFGIGFPPFLGGPFRYMDSLGIQQVVERLSHYQQQFGDKFTPAKCLVEMA 708
>gi|31541815|ref|NP_076226.2| peroxisomal bifunctional enzyme [Mus musculus]
gi|341940646|sp|Q9DBM2.4|ECHP_MOUSE RecName: Full=Peroxisomal bifunctional enzyme; Short=PBE;
Short=PBFE; Includes: RecName: Full=Enoyl-CoA
hydratase/3,2-trans-enoyl-CoA isomerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|16877282|gb|AAH16899.1| Enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
[Mus musculus]
gi|148665191|gb|EDK97607.1| enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
[Mus musculus]
Length = 718
Score = 339 bits (869), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 233/713 (32%), Positives = 375/713 (52%), Gaps = 42/713 (5%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A+I L NPPVNA++ ++ +++ ++A+ V+AIV+ G F G DI+ F+
Sbjct: 11 LAMIRLCNPPVNAISPTVITEVRNGLQKASLDHTVRAIVICGANDNFCAGADIHGFKSPT 70
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G +++ +V+ I+ +KP+VAA++G+ALGGGLELA+GCH RIA K ++G P
Sbjct: 71 G---------LTLGSLVDEIQRYQKPVVAAIQGVALGGGLELALGCHYRIANAKARVGFP 121
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 191
E+ LG++PG TQ LPR+VG+ A++++ + I+++E KLG++D VV S+ + + +
Sbjct: 122 EVMLGILPGARGTQLLPRVVGVPVALDLITSGRHISTDEALKLGILDVVVKSDPVEEAIK 181
Query: 192 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 251
I +P R L++ + SL V A + +K P + C+ ++
Sbjct: 182 FAQTVIGKPIEPR-RILNKP--VPSLPNMDSVFAEAIAKVRKQYPGRLAPETCVRSVQAS 238
Query: 252 IVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK---PRGVRKV 308
+ H + +EAK+F L +R L + FFA+++ +K + K + V V
Sbjct: 239 VKHPYEVAIKEEAKLFMYLRGSGQARALQYAFFAEKSANKWSTPSGASWKTASAQPVSSV 298
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
V+G G MG GIA + I VV E + + L K I + + ++ K N
Sbjct: 299 GVLGLGTMGRGIAISFARVGIPVVAVESDPKQLDTAKKIITSTLEKEASKSGQASAKPN- 357
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
L+ E VD+VIEAV E + LK+K+F+EL C P L TNTS +D++ +
Sbjct: 358 ----LRFSSSTKELSSVDLVIEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSALDVDDI 413
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
T +IG HFFSPAH+M LLE++ + +S I +M++ K I K+ VVVGNC G
Sbjct: 414 ASSTDRPQLVIGTHFFSPAHIMRLLEVIPSRYSSPTTIATVMSLSKRIGKIGVVVGNCYG 473
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVA-------A 541
F NR PY L+ G +D + FG +GPF++ DLAG V
Sbjct: 474 FVGNRMLAPYYNQGYFLIEEGSKPEDVDGVLEEFGFRMGPFRVSDLAGLDVGWKVRKGQG 533
Query: 542 ATSKEFDKAFPDR----SFQSPLVDLLLKSGRNGKANGKGLYTYEK--GSKPKPDPSVLP 595
T P R + SP+ D+L ++GR G+ GKG Y Y+K G KPDP +
Sbjct: 534 LTGPSLPPGTPTRKRGNTRYSPIADMLCEAGRFGQKTGKGWYQYDKPLGRIHKPDPWLSE 593
Query: 596 IIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGM 655
+ + R +I K S++++EI+E L+ ++NE+ R+LEEG+ +D + G
Sbjct: 594 FLSQYRETHHI----KQRSISKEEILERCLYSLINEAFRILEEGMAASPEHIDVIYLHGY 649
Query: 656 SFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF--FKPSRFLEERATKGIP 706
+P + GG +++A +VG V L+K+ + + +PS +L +G P
Sbjct: 650 GWPRHVGGPMYYAASVGLPTVLEKLQKYYRQNPDIPQLEPSDYLRRLVAQGSP 702
>gi|378979951|ref|YP_005228092.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae HS11286]
gi|419972673|ref|ZP_14488100.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae KPNIH1]
gi|419977648|ref|ZP_14492947.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae KPNIH2]
gi|419983236|ref|ZP_14498387.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae KPNIH4]
gi|419989515|ref|ZP_14504491.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae KPNIH5]
gi|419995553|ref|ZP_14510359.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae KPNIH6]
gi|420001534|ref|ZP_14516189.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae KPNIH7]
gi|420006561|ref|ZP_14521058.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae KPNIH8]
gi|420012382|ref|ZP_14526696.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae KPNIH9]
gi|420018001|ref|ZP_14532199.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae KPNIH10]
gi|420023911|ref|ZP_14537926.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae KPNIH11]
gi|420037127|ref|ZP_14550783.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae KPNIH14]
gi|420041073|ref|ZP_14554571.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae KPNIH16]
gi|420046835|ref|ZP_14560154.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae KPNIH17]
gi|420052545|ref|ZP_14565726.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae KPNIH18]
gi|420075319|ref|ZP_14587795.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae KPNIH22]
gi|420083673|ref|ZP_14595950.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae KPNIH23]
gi|421909639|ref|ZP_16339449.1| Enoyl-CoA hydratase [Klebsiella pneumoniae subsp. pneumoniae
ST258-K26BO]
gi|421916972|ref|ZP_16346536.1| Enoyl-CoA hydratase [Klebsiella pneumoniae subsp. pneumoniae
ST258-K28BO]
gi|424932422|ref|ZP_18350794.1| Fatty acid oxidation complex subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae KpQ3]
gi|428150563|ref|ZP_18998332.1| Enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase /
3-hydroxybutyryl-CoA epimerase [Klebsiella pneumoniae
subsp. pneumoniae ST512-K30BO]
gi|428940462|ref|ZP_19013545.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae VA360]
gi|364519362|gb|AEW62490.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae HS11286]
gi|397350070|gb|EJJ43160.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae KPNIH1]
gi|397353989|gb|EJJ47056.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae KPNIH2]
gi|397355407|gb|EJJ48406.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae KPNIH4]
gi|397367320|gb|EJJ59932.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae KPNIH6]
gi|397369638|gb|EJJ62238.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae KPNIH5]
gi|397371858|gb|EJJ64366.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae KPNIH7]
gi|397382271|gb|EJJ74434.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae KPNIH9]
gi|397386224|gb|EJJ78310.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae KPNIH8]
gi|397390716|gb|EJJ82614.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae KPNIH10]
gi|397400147|gb|EJJ91793.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae KPNIH11]
gi|397405790|gb|EJJ97236.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae KPNIH14]
gi|397418608|gb|EJK09766.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae KPNIH17]
gi|397419391|gb|EJK10540.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae KPNIH16]
gi|397425447|gb|EJK16326.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae KPNIH18]
gi|397448412|gb|EJK38586.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae KPNIH22]
gi|397451003|gb|EJK41096.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae KPNIH23]
gi|407806609|gb|EKF77860.1| Fatty acid oxidation complex subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae KpQ3]
gi|410116541|emb|CCM82074.1| Enoyl-CoA hydratase [Klebsiella pneumoniae subsp. pneumoniae
ST258-K26BO]
gi|410120689|emb|CCM89161.1| Enoyl-CoA hydratase [Klebsiella pneumoniae subsp. pneumoniae
ST258-K28BO]
gi|426302261|gb|EKV64470.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae VA360]
gi|427539428|emb|CCM94470.1| Enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase /
3-hydroxybutyryl-CoA epimerase [Klebsiella pneumoniae
subsp. pneumoniae ST512-K30BO]
Length = 714
Score = 339 bits (869), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 234/713 (32%), Positives = 368/713 (51%), Gaps = 34/713 (4%)
Query: 8 MEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGG 64
+EV D +A+IT+ P +N L + ++ + V+ +V ++ F G
Sbjct: 9 LEVCADKIAVITIDAPGEKMNTLKAEFGSQVRGLIRQLRDDKSVRGVVFISAKADNFIAG 68
Query: 65 FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
DIN+ + A + + +++ I P++AA+ G LGGGLELA+ CH RI
Sbjct: 69 ADINMIARCRSAQEAEALARQGQQIMAE-IHGLSIPVIAAIHGACLGGGLELALACHGRI 127
Query: 125 AA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDA 179
+ KT+LGLPE+ LG++PG TQRLPRL+G+S A++MML K + + K GL+D
Sbjct: 128 CSDDEKTRLGLPEVQLGLLPGSGGTQRLPRLIGVSTALDMMLTGKQLRPRQALKAGLVDE 187
Query: 180 VVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLK--LARLQAKKTAPN 237
VV LL+ A+++A + +P R + +++ + R +L + + +KT N
Sbjct: 188 VVPQAILLQA----AVELALKGRPTSREVPVRERVLAGPLGRHLLFQFVGKQTQRKTQGN 243
Query: 238 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 297
P + L V+E G+ HG SG +EA+ F EL M S+ L +FFA K P +
Sbjct: 244 YPAVKRILQVVENGLAHGCSSGYAEEARAFGELAMSPQSQALRSIFFASTDLKKDPG-AE 302
Query: 298 IGLKPRGVRKVAVIGGGLMGSGIATAHILNN-IYVVLKEVNSEYLLKGIKTIEANVRGLV 356
G P +R VAV+GGGLMG GIA + V +K++ + +K + V
Sbjct: 303 AGPGP--LRSVAVLGGGLMGGGIAYVTACKGGLPVRIKDIQPRGINHALKYSWDLLNKQV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
+ +L + + + ++ G DY F D+VIEAV E + LKQ++ SE+E+ P I
Sbjct: 361 RQRRLRPVERDRQMALISGTTDYQGFAHRDVVIEAVFEDLALKQRMVSEVEQYGGPQTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + S ++IG HFFSP MPL+E++ + T Q I ++ + K
Sbjct: 421 ASNTSSLPIGDIAAHASRPGQVIGLHFFSPVEKMPLVEVIPHKGTDPQTIATVVQLAKRQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A L+ G + ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVADKAGFYVNRILAPYINEAMRLLVEGEPIEVIDNALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTYE---KGSKPKPDP 591
+ AF +R F P ++D +LK R G+ N +G Y YE + SK +PDP
Sbjct: 541 IDTGTKIIPVLESAFGER-FSPPANIIDAILKDDRKGRKNNRGFYLYETKGRKSKKRPDP 599
Query: 592 SVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDAS 651
+V P++ R S + +++ E + ++NE+ R +E I+ A D D +
Sbjct: 600 AVYPLLGIGRPQSRLY---------AQQVAERCVMMMLNEAARCFDEQIIRSARDGDIGA 650
Query: 652 VLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
V G+ FP + GG + D +GA V L++ + +G F P L A +G
Sbjct: 651 VFGIGFPPFLGGPFRYMDTIGAGEVAAILQRLAAQFGPRFTPCDTLLRMAEQG 703
>gi|419866590|ref|ZP_14388946.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O103:H25 str. CVM9340]
gi|388334501|gb|EIL01089.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O103:H25 str. CVM9340]
Length = 714
Score = 339 bits (869), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 231/715 (32%), Positives = 365/715 (51%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAIITIDVPDEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNSAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R ++E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCVDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>gi|432936067|ref|XP_004082104.1| PREDICTED: trifunctional enzyme subunit alpha, mitochondrial-like
[Oryzias latipes]
Length = 763
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 231/732 (31%), Positives = 373/732 (50%), Gaps = 44/732 (6%)
Query: 1 MAAPRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVK-AIVLTGN 57
+A V E+ +D VA++ + +P VN L+ + L + EE + D VK A++++
Sbjct: 36 LARTHVNYEIKDD-VAVVRINDPNSKVNTLSTQMQKDLTEVMEEVWANDAVKSAVLISSK 94
Query: 58 GGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELA 117
G F G DIN+ Q A +VS + ++ IE KP+VAA+ G LGGGLE A
Sbjct: 95 PGCFIAGADINMIQSCKSAEEVSRLSQEGQKMF-EKIEKSPKPVVAAINGSCLGGGLEFA 153
Query: 118 MGCHARIA--APKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGW 172
+ C RIA + KT LG PE+ LG++PG TQRLP++VGL A +MML ++I +++
Sbjct: 154 IACQYRIATKSKKTVLGTPEVMLGLLPGAGGTQRLPKMVGLPNAFDMMLTGRNIRADKAK 213
Query: 173 KLGLIDAVV-------------TSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSE 219
K+GL+ ++ T E L +V+ A I ++ + K+
Sbjct: 214 KMGLVHQLIDPLGPGLKSPEERTIEYLEEVAVECAKGIVNKKIALHKEKSMMQKIQDYVM 273
Query: 220 AREVLK---LARLQAKKTAPNMPQHQACLDVIE---EGIVHGGYSGVLKEAKVFKELVML 273
+ E ++ +Q+K + + A L +IE G+ G +G L E++ F +L
Sbjct: 274 SFEFVRNQIYKTVQSKVMKQSKGLYPAPLKIIECVKVGVEQGPVAGYLAESQNFGQLART 333
Query: 274 DTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVL 333
S L+ ++ Q A K G R V+ +A++G GLMG+GIA + ++ +L
Sbjct: 334 SESAALIGLYHGQVACKK----NRFGTPEREVKTLAILGAGLMGAGIAQVTVDKGVHTIL 389
Query: 334 KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVI 393
K+ L +G + + + + +T + + L L G LDY F+ DMVIEAV
Sbjct: 390 KDTTQAGLARGEQQVYKGLNDKTKKRSITSFERDATLSNLTGTLDYRGFEKADMVIEAVF 449
Query: 394 ESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLL 453
E + +K + E+E PPHCI A+NTS + + + + D+++G H+FSP M LL
Sbjct: 450 EDISIKHAVLKEVEAVVPPHCIFASNTSALPIKEIAAASKRPDKVVGMHYFSPVDKMQLL 509
Query: 454 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVF 513
EI+ TE+TS + VG KV +VVG+ GF R P A ++ GVD
Sbjct: 510 EIITTEKTSKDTTASAVAVGLKQGKVIIVVGDGPGFYTTRCLAPMLAEAVRVLQEGVDPK 569
Query: 514 RIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLL---LKSGRN 570
++D+ SFG P+G L D G VAA +++ KAF R F V++L + G
Sbjct: 570 KLDALTTSFGFPVGAATLADEVGIDVAAHVAEDLGKAFGSR-FGGGNVEVLKTMVDMGFK 628
Query: 571 GKANGKGLYTYEKGSKPKP-DPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVV 629
G+ +GKG Y Y+ G+K K +P + I+E R + P KP ++ ++ ++ V
Sbjct: 629 GRKSGKGCYIYQPGTKVKEVNPDIGEILERFR----MTP--KPDVSSDSDVQHRLVSRFV 682
Query: 630 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 689
NE+ L+EG++ + D +V G+ FP GG + D+ GA+ + ++++ +YGN
Sbjct: 683 NEAVLCLQEGVLNSPLEGDIGAVFGLGFPPCHGGPFRFVDSFGADKLVQKMRQYEAVYGN 742
Query: 690 FFKPSRFLEERA 701
F P + L + A
Sbjct: 743 QFTPCQLLLDHA 754
>gi|12836375|dbj|BAB23628.1| unnamed protein product [Mus musculus]
Length = 718
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 233/713 (32%), Positives = 375/713 (52%), Gaps = 42/713 (5%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A+I L NPPVNA++ ++ +++ ++A+ V+AIV+ G F G DI+ F+
Sbjct: 11 LAMIRLCNPPVNAISPTVITEVRNGLQKASLDHTVRAIVICGANDNFCAGADIHGFKSPT 70
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G +++ +V+ I+ +KP+VAA++G+ALGGGLELA+GCH RIA K ++G P
Sbjct: 71 G---------LTLGSLVDEIQRYQKPVVAAIQGVALGGGLELALGCHYRIANAKARVGFP 121
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 191
E+ LG++PG TQ LPR+VG+ A++++ + I+++E KLG++D VV S+ + + +
Sbjct: 122 EVMLGILPGARGTQLLPRVVGVPVALDLITSGRHISTDEALKLGILDVVVKSDPVEEAIK 181
Query: 192 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 251
I +P R L++ + SL V A + +K P + C+ ++
Sbjct: 182 FAQTVIGKPIEPR-RILNKP--VPSLPNMDSVFAEAIAKVRKQYPGRLAPETCVRSVQAS 238
Query: 252 IVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK---PRGVRKV 308
+ H + +EAK+F L +R L + FFA+++ +K + K + V V
Sbjct: 239 VKHPYEVAIKEEAKLFMYLRGSGQARALQYAFFAEKSANKWSTPSGASWKTASAQPVSSV 298
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
V+G G MG GIA + I VV E + + L K I + + ++ K N
Sbjct: 299 GVLGLGTMGRGIAISFARVGIPVVAVESDPKQLDTAKKIITSTLEKEASKSGQASAKPN- 357
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
L+ E VD+VIEAV E + LK+K+F+EL C P L TNTS +D++ +
Sbjct: 358 ----LRFSSSTKELSSVDLVIEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSALDVDDI 413
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
T +IG HFFSPAH+M LLE++ + +S I +M++ K I K+ VVVGNC G
Sbjct: 414 ASSTDRPQLVIGTHFFSPAHIMRLLEVIPSRYSSPTTIATVMSLSKRIGKIGVVVGNCYG 473
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVA-------A 541
F NR PY L+ G +D + FG +GPF++ DLAG V
Sbjct: 474 FVGNRMLAPYYNQGYFLIEEGSKPEGVDGVLEEFGFRMGPFRVSDLAGLDVGWKVRKGQG 533
Query: 542 ATSKEFDKAFPDR----SFQSPLVDLLLKSGRNGKANGKGLYTYEK--GSKPKPDPSVLP 595
T P R + SP+ D+L ++GR G+ GKG Y Y+K G KPDP +
Sbjct: 534 LTGPSLPPGTPTRKRGNTRYSPIADMLCEAGRFGQKTGKGWYQYDKPLGRIHKPDPWLSE 593
Query: 596 IIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGM 655
+ + R +I K S++++EI+E L+ ++NE+ R+LEEG+ +D + G
Sbjct: 594 FLSQYRETHHI----KQRSISKEEILERCLYSLINEAFRILEEGMAASPEHIDVIYLHGY 649
Query: 656 SFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF--FKPSRFLEERATKGIP 706
+P + GG +++A +VG V L+K+ + + +PS +L +G P
Sbjct: 650 GWPRHVGGPMYYAASVGLPTVLEKLQKYYRQNPDIPQLEPSDYLRRLVAQGSP 702
>gi|398881422|ref|ZP_10636416.1| 3-hydroxyacyl-CoA dehydrogenase [Pseudomonas sp. GM60]
gi|398201559|gb|EJM88434.1| 3-hydroxyacyl-CoA dehydrogenase [Pseudomonas sp. GM60]
Length = 684
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 223/710 (31%), Positives = 364/710 (51%), Gaps = 44/710 (6%)
Query: 3 APRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFS 62
AP V ME D VA++ + NPP+NA + + L E + D+++A V+ G G F
Sbjct: 4 APVVHMERDGD-VAVLIIDNPPINAASAQVRRELLLAIERVSGDDNLRAAVIIGQGRGFI 62
Query: 63 GGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHA 122
G D+ F + + D + V+ IE C KP+VAA+ G ALGGG ELAMGC
Sbjct: 63 AGSDLREFGQP--------LQDPQLPEVIAAIEACAKPVVAALHGAALGGGFELAMGCDV 114
Query: 123 RIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDA 179
RIA+P LGLPE+TLG+IPG TQRLPRLVG++ AIE++ + + + K G+IDA
Sbjct: 115 RIASPACLLGLPEVTLGIIPGAGGTQRLPRLVGMAAAIELICSGMRVNAVDALKSGMIDA 174
Query: 180 VVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMP 239
+ ++L V+ +A A ++P + ++ E+ + L+ A + P
Sbjct: 175 I-ADDDLRTVAVRFAHQ--AHKRPVL-------EMPIPEESPKKLEATCATALRKGRGRP 224
Query: 240 QHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIG 299
QA ++ + + + E + F+ L + + L H+FFA+R ++P
Sbjct: 225 AVQAAIEAVLDAARLPAALALSNEREAFQRLRLSPEAAALRHLFFAERGAGRLPEADRA- 283
Query: 300 LKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRG 359
+ V +V +IG G MG+GIA A + V L E + L G++ I+A +
Sbjct: 284 -RSIDVEQVGIIGAGTMGAGIAVAFLDGGFSVTLIEQSPAALAAGLERIDAFYARQLHSK 342
Query: 360 KLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATN 419
KLT+ + L+ L + +V+EAV E + +K+++ L+ I+A+N
Sbjct: 343 KLTEKDIHERLQRLHPSCAFEALVACQLVVEAVFEDMAVKRELMMRLDAVLSAETIIASN 402
Query: 420 TSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKV 479
TS +DL+++ ++ D++ G HFFSPA+VMPLLE+VR T++Q + + VGK + KV
Sbjct: 403 TSYLDLDVIAAASARPDKVCGLHFFSPANVMPLLEVVRGAATTSQTLATALAVGKRLGKV 462
Query: 480 PVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGV 539
PV+ N GF NR + Y + L+ G +ID+A+++FG +GPF + DL+G +
Sbjct: 463 PVIAANAFGFIGNRIYAAYRRQCEYLLEDGASPQQIDAAMQAFGFAMGPFAVADLSGLDI 522
Query: 540 AAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEE 599
A K + R + D L ++GR G+ G G Y Y K DP V +I +
Sbjct: 523 AWRMRKAAEVDRDPRVRYVAIADRLCEAGRLGRKTGAGYYRYAD-EKRLVDPFVETLIAQ 581
Query: 600 CRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPS 659
R ++P + ++ EI + +L +V+E+ +L + + +A D+D V G FP
Sbjct: 582 EREKKGLVPQ----TFSDAEIQQRLLSSMVSEAVLLLAQKVAQQAGDIDLVLVNGYGFPR 637
Query: 660 YRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSA 709
+ GG +FWA ++ SL+ + A++GIP+++
Sbjct: 638 WEGGPLFWARRQDPQWLGASLRALTS---------------ASQGIPVAS 672
>gi|145299117|ref|YP_001141958.1| multifunctional fatty acid oxidation complex subunit alpha
[Aeromonas salmonicida subsp. salmonicida A449]
gi|142851889|gb|ABO90210.1| fatty oxidation complex, alpha subunit [Aeromonas salmonicida
subsp. salmonicida A449]
Length = 717
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 242/729 (33%), Positives = 373/729 (51%), Gaps = 45/729 (6%)
Query: 1 MAAPRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDD-VKAIVLTGN 57
M+A ++ V DG+ I+T+ P +N L + V ++ E + + + +V++G
Sbjct: 2 MSAKTFSLTVRQDGIGILTMDVPGESMNTLKVAFVDEIRAVLAEVKNNSELIGLVVVSGK 61
Query: 58 GGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELA 117
F G DI++ A D + +++ IE P++AA+ G LGGGLELA
Sbjct: 62 KDSFIAGADISMLAACTSAEDAQTLSREG-QIIFAEIESLAIPVIAAIHGPCLGGGLELA 120
Query: 118 MGCHARIAAP--KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGW 172
+ CH R+ KT LGLPE+ LG++PG TQRLPRL+G++KA+++ML K + +++
Sbjct: 121 LACHGRVVTDHGKTVLGLPEVQLGLLPGSGGTQRLPRLIGVAKALDLMLTGKQVRAKQAK 180
Query: 173 KLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSE----AREVL--KL 226
KLGL+D VV LL A+ +A + KP R + D G + E R+VL +
Sbjct: 181 KLGLVDDVVPPSILLDA----AIKLAKQGKP--RHQLKRDLQGKVLETNALGRKVLFDQA 234
Query: 227 ARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQ 286
+ KT N P + L+V+ G+ G +G+ E++ F ELVM S L +FFA
Sbjct: 235 RKGVMSKTRGNYPAPERILEVVRIGVEEGMQAGLAAESRHFGELVMTAESAALRSLFFAT 294
Query: 287 RATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGI 345
K VT G +PR V AV+GGGLMG GIA + V +K+V S + +
Sbjct: 295 TEMKK--EVTYQGAEPRKVAHAAVLGGGLMGGGIAFVTATKAGVPVRIKDVASAGIGNAM 352
Query: 346 KTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSE 405
+ + + R + + + + +L G LDYS F VDMV+EAV E + LK ++ E
Sbjct: 353 RYSYDILAKKLKRRHILRSELEKQMSLLSGTLDYSGFHRVDMVVEAVFEDLALKHQMVKE 412
Query: 406 LEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQV 465
+E C H + A+NTS++ ++ + + + +RI+G H+FSP MPL EI+ TSA+
Sbjct: 413 VEHECGEHTVFASNTSSLPIHQIAAEAAHPERIVGLHYFSPVDKMPLAEIIPHAGTSAET 472
Query: 466 ILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLP 525
+ + + K P+VV + GF VNR PY A LV G V +DSA+ FG P
Sbjct: 473 VATTLAFARAQGKTPIVVKDEAGFYVNRILAPYMNEAARLVLEGEPVEVLDSALLDFGFP 532
Query: 526 IGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP-LVDLLLKSGRNGKANGKGLYTYEKG 584
+GP LLD G V A + +K FQ+P D LL+ R G+ NGKG Y Y K
Sbjct: 533 VGPITLLDEVGIDVGAKIAPILEKELGGEQFQAPKAFDKLLQDDRKGRKNGKGFYLYGKA 592
Query: 585 S----------KPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCR 634
+ K K D SV ++ + P K + EI E + ++NE+
Sbjct: 593 APRNRLTGKEGKKKVDESVYAVL-------GVKPAPKQ---SRMEIAERCVLMMLNEAAM 642
Query: 635 VLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPS 694
L+ G+V A D D ++ G+ FP + GG + D +G +++ L+ + + YG+ F P
Sbjct: 643 ALDSGVVASARDGDIGAIFGIGFPPFLGGPFRYMDTLGIDHLVERLEHYQKRYGDRFAPC 702
Query: 695 RFLEERATK 703
L+ A +
Sbjct: 703 DRLKAMAAE 711
>gi|418357533|ref|ZP_12960227.1| multifunctional fatty acid oxidation complex subunit alpha
[Aeromonas salmonicida subsp. salmonicida 01-B526]
gi|356689314|gb|EHI53858.1| multifunctional fatty acid oxidation complex subunit alpha
[Aeromonas salmonicida subsp. salmonicida 01-B526]
Length = 716
Score = 338 bits (868), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 242/729 (33%), Positives = 373/729 (51%), Gaps = 45/729 (6%)
Query: 1 MAAPRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDD-VKAIVLTGN 57
M+A ++ V DG+ I+T+ P +N L + V ++ E + + + +V++G
Sbjct: 1 MSAKTFSLTVRQDGIGILTMDVPGESMNTLKVAFVDEIRAVLAEVKNNSELIGLVVVSGK 60
Query: 58 GGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELA 117
F G DI++ A D + +++ IE P++AA+ G LGGGLELA
Sbjct: 61 KDSFIAGADISMLAACTSAEDAQTLSREG-QIIFAEIESLAIPVIAAIHGPCLGGGLELA 119
Query: 118 MGCHARIAAP--KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGW 172
+ CH R+ KT LGLPE+ LG++PG TQRLPRL+G++KA+++ML K + +++
Sbjct: 120 LACHGRVVTDHGKTVLGLPEVQLGLLPGSGGTQRLPRLIGVAKALDLMLTGKQVRAKQAK 179
Query: 173 KLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSE----AREVL--KL 226
KLGL+D VV LL A+ +A + KP R + D G + E R+VL +
Sbjct: 180 KLGLVDDVVPPSILLDA----AIKLAKQGKP--RHQLKRDLQGKVLETNALGRKVLFDQA 233
Query: 227 ARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQ 286
+ KT N P + L+V+ G+ G +G+ E++ F ELVM S L +FFA
Sbjct: 234 RKGVMSKTRGNYPAPERILEVVRIGVEEGMQAGLAAESRHFGELVMTAESAALRSLFFAT 293
Query: 287 RATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGI 345
K VT G +PR V AV+GGGLMG GIA + V +K+V S + +
Sbjct: 294 TEMKK--EVTYQGAEPRKVAHAAVLGGGLMGGGIAFVTATKAGVPVRIKDVASAGIGNAM 351
Query: 346 KTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSE 405
+ + + R + + + + +L G LDYS F VDMV+EAV E + LK ++ E
Sbjct: 352 RYSYDILAKKLKRRHILRSELEKQMSLLSGTLDYSGFHRVDMVVEAVFEDLALKHQMVKE 411
Query: 406 LEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQV 465
+E C H + A+NTS++ ++ + + + +RI+G H+FSP MPL EI+ TSA+
Sbjct: 412 VEHECGEHTVFASNTSSLPIHQIAAEAAHPERIVGLHYFSPVDKMPLAEIIPHAGTSAET 471
Query: 466 ILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLP 525
+ + + K P+VV + GF VNR PY A LV G V +DSA+ FG P
Sbjct: 472 VATTLAFARAQGKTPIVVKDEAGFYVNRILAPYMNEAARLVLEGEPVEVLDSALLDFGFP 531
Query: 526 IGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP-LVDLLLKSGRNGKANGKGLYTYEKG 584
+GP LLD G V A + +K FQ+P D LL+ R G+ NGKG Y Y K
Sbjct: 532 VGPITLLDEVGIDVGAKIAPILEKELGGEQFQAPKAFDKLLQDDRKGRKNGKGFYLYGKA 591
Query: 585 S----------KPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCR 634
+ K K D SV ++ + P K + EI E + ++NE+
Sbjct: 592 APRNRLTGKEGKKKVDESVYAVL-------GVKPAPKQ---SRMEIAERCVLMMLNEAAM 641
Query: 635 VLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPS 694
L+ G+V A D D ++ G+ FP + GG + D +G +++ L+ + + YG+ F P
Sbjct: 642 ALDSGVVASARDGDIGAIFGIGFPPFLGGPFRYMDTLGIDHLVERLEHYQKRYGDRFAPC 701
Query: 695 RFLEERATK 703
L+ A +
Sbjct: 702 DRLKAMAAE 710
>gi|426403796|ref|YP_007022767.1| fatty oxidation complex subunit alpha [Bdellovibrio bacteriovorus
str. Tiberius]
gi|425860464|gb|AFY01500.1| fatty oxidation complex, alpha subunit [Bdellovibrio bacteriovorus
str. Tiberius]
Length = 717
Score = 338 bits (868), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 227/691 (32%), Positives = 362/691 (52%), Gaps = 29/691 (4%)
Query: 11 GNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR-FSGGFDINV 69
G V L+ VN + P++ LK+ EE + KA++ N + F G DI
Sbjct: 13 GEVAVVEFDLVGEKVNKFSTPVMMRLKEVVEE-LKKSSYKAVIFKSNKPKIFIAGADIEE 71
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA--P 127
+ + A + E V++++ED P +AAV G +GGG E + C RIA+
Sbjct: 72 IKSMTKAEEFEAAVKGGQE-VISMVEDLPMPTIAAVNGACMGGGCEFILACDYRIASEDS 130
Query: 128 KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 184
T++GLPE+ LG++PG RLPR++GL A++++L KS+ S++ KLGL+D VV +
Sbjct: 131 STKIGLPEIQLGILPGFGGCIRLPRVIGLQAALDIILAGKSVNSKKALKLGLVDKVVHAN 190
Query: 185 ELLKVSRLWALDIAA-----RRKPWIRSLHRTDKLGSLSEAREVLKLARLQA-KKTAPNM 238
L S WA +I A RRK + L S V K AR K T +
Sbjct: 191 LLESFSLKWAKEIIADGAKKRRKTFKPQGAVNVILESALGRSIVFKKAREGVLKATKGHY 250
Query: 239 PQHQACLDVIEEGIVHGGYSGVLK-EAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 297
P L+VI++ L+ E + F +L + D S+ L+HVF+ K VT
Sbjct: 251 PAPLQALEVIQKTYGMSDRDAALRVEREGFCKLGVTDISKNLIHVFYLTEMVKKQNGVTG 310
Query: 298 IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 357
+ +KPR V+ + V+G G MG GIA I V +K++N++ L KG+K LV
Sbjct: 311 VDVKPRDVKGLGVLGAGTMGGGIAYVAADKGIQVRMKDLNTDALGKGLKHASDLWMKLVK 370
Query: 358 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 417
R + + + + ++ DY+ FK++D+V+EA++E + +KQK+ E P I+A
Sbjct: 371 RKSIDKYQFQQKMDLVSVSTDYAGFKNLDVVVEAIVEDMGVKQKVIGECAGQMRPDAIIA 430
Query: 418 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 477
TNTS++ + + + + G HFF+P + MPL+E++R E+TS + I + + K +
Sbjct: 431 TNTSSLSVTEMAKGHPRPEYFAGMHFFNPVNKMPLIEVIRGEKTSDETIATIYELSKKMG 490
Query: 478 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA-IRSFGLPIGPFQLLDLAG 536
K+PVVV + GF VNR PY A L+ G+ + +D ++ FG+P+GPF+L+D G
Sbjct: 491 KMPVVVKDGPGFLVNRLLLPYMGEAAFLLQEGMSIEFVDKVYVKEFGMPMGPFELMDEVG 550
Query: 537 YGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTY-EKGSKPKPDPSVLP 595
V K F KAF +R + ++ L SGR G+ NGKG YTY E G + D +V
Sbjct: 551 LDVCLKVLKIFKKAFGERIELAACMEALGNSGRLGRKNGKGFYTYGEDGKRGAVDQTVYA 610
Query: 596 IIEECRRLSNIMPGGKPISVTE-KEIVEMILFPVVNE-SCRVLEEGIVVRASDLDDASVL 653
+ G+P + + KE +E +F ++NE S ++E+ IV ++D A ++
Sbjct: 611 ALGL----------GQPTNPYDGKECIERGVFAMINECSLALVEDRIVETPHEVDLAMIM 660
Query: 654 GMSFPSYRGGIVFWADAVGANYVYTSLKKWS 684
G FP +RGG++ + D++G YV L ++
Sbjct: 661 GTGFPPFRGGLMKYTDSIGTQYVADQLAMYA 691
>gi|422806339|ref|ZP_16854771.1| fatty oxidation complex [Escherichia fergusonii B253]
gi|324112877|gb|EGC06853.1| fatty oxidation complex [Escherichia fergusonii B253]
Length = 714
Score = 338 bits (868), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 240/714 (33%), Positives = 371/714 (51%), Gaps = 35/714 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +A++T+ P +N L A ++ +E +++ +V ++ F
Sbjct: 8 TLNVRLDHIAVVTIDVPGEKMNTLKAEFAAQVRAILKEIRENKEIRGVVFISAKADNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ + A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIDHCNTAMEAETLARQGQQLMAE-IHALPVPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
I PKT LGLPE+ LG++PG TQRLPRLVGLS A++M+L K + + K GL+D
Sbjct: 127 ICTDDPKTILGLPEVQLGLLPGSGGTQRLPRLVGLSTALDMILTGKQLRPGQALKSGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
+V LL+ A++ A + + RSL +++ G L + +++ +KT
Sbjct: 187 EIVPQSILLQA----AVERAKQERQTPRSLPVRERILAGPLGRSLLFRFVSKKTDQKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P LDVIE G+ G SG EA+ F EL M S+ L ++FFA K P T
Sbjct: 243 NYPATTRILDVIETGLSQGSSSGYDAEARAFGELAMTSQSQSLRNIFFASTEVKKDPGST 302
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEANVRGL 355
++P + + ++GGGLMG GIA + V +K++N + + +K +
Sbjct: 303 ---VQPGTLDSIGILGGGLMGGGIAFVTACKAGLPVRIKDINPQGINHALKYSWQLLDAK 359
Query: 356 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCI 415
V R + + L + G DY F D+VIEAV E + LKQ++ +E+EK C H I
Sbjct: 360 VRRRHIKAGEQARQLAKISGTTDYQGFAHRDVVIEAVFEDLSLKQQMVAEVEKNCGLHTI 419
Query: 416 LATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKI 475
A+NTS+I ++ + + +++IG HFFSP MPL+E++ TS + I ++ + K
Sbjct: 420 FASNTSSIPISDIAAHATRPEQVIGLHFFSPVEKMPLVEVIPHAATSEKTIATIVKLAKK 479
Query: 476 IKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLA 535
K P+VV + GF VNR PY A L++ G V ID+A+ FG P+GP QLLD
Sbjct: 480 QGKTPIVVQDKAGFYVNRILAPYIDEAIRLLTEGEKVETIDTALVKFGFPVGPIQLLDEV 539
Query: 536 GYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--D 590
G + A+ +R F +P +V +L R G+ NG+G Y Y KG K K D
Sbjct: 540 GIDTGTKIIPVLEAAYGER-FSTPANVVSSILNDDRKGRKNGRGFYLYGAKGRKSKKQVD 598
Query: 591 PSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDA 650
P + II + G +S ++I E + ++NE+ R EG++ A D D
Sbjct: 599 PEIYKIIA--------VQGQSKLSA--QQITERCVMLMLNEAARCYREGVIRHARDGDIG 648
Query: 651 SVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA+ V L++ + LYG+ F P L + A +G
Sbjct: 649 AVFGIGFPPFLGGPFRYMDSLGASEVVAVLQRLTSLYGSRFTPCEQLLQMAERG 702
>gi|300817452|ref|ZP_07097669.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
107-1]
gi|415879583|ref|ZP_11544827.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
79-10]
gi|432806489|ref|ZP_20040417.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE91]
gi|432935123|ref|ZP_20134560.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE184]
gi|433194410|ref|ZP_20378399.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE90]
gi|300530078|gb|EFK51140.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
107-1]
gi|342926739|gb|EGU95461.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
79-10]
gi|431354631|gb|ELG41357.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE91]
gi|431453291|gb|ELH33701.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE184]
gi|431715435|gb|ELJ79585.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE90]
Length = 714
Score = 338 bits (868), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 231/715 (32%), Positives = 365/715 (51%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P+ +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPS-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNSAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R ++E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCVDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>gi|194436233|ref|ZP_03068335.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
101-1]
gi|251785701|ref|YP_003000005.1| FadJ monomer, subunit of 3-hydroxyacyl-CoA dehydrogenase
[multifunctional] and fatty acid oxidation complex
[Escherichia coli BL21(DE3)]
gi|253772736|ref|YP_003035567.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|254162349|ref|YP_003045457.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli B str. REL606]
gi|254289110|ref|YP_003054858.1| multifunctional enoyl-CoA
hydratase/epimerase/isomerase/3-hydroxyacyl-CoA
dehydrogenase [Escherichia coli BL21(DE3)]
gi|297517922|ref|ZP_06936308.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli OP50]
gi|422786961|ref|ZP_16839700.1| fatty oxidation complex [Escherichia coli H489]
gi|422792597|ref|ZP_16845297.1| fatty oxidation complex [Escherichia coli TA007]
gi|442599062|ref|ZP_21016795.1| Enoyl-CoA hydratase [Escherichia coli O5:K4(L):H4 str. ATCC 23502]
gi|194424961|gb|EDX40946.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
101-1]
gi|242377974|emb|CAQ32743.1| FadJ monomer, subunit of 3-hydroxyacyl-CoA dehydrogenase
[multifunctional] and fatty acid oxidation complex
[Escherichia coli BL21(DE3)]
gi|253323780|gb|ACT28382.1| fatty acid oxidation complex, alpha subunit FadJ [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253974250|gb|ACT39921.1| fused enoyl-CoA hydratase and epimerase and
isomerase/3-hydroxyacyl-CoA dehydrogenase [Escherichia
coli B str. REL606]
gi|253978417|gb|ACT44087.1| fused enoyl-CoA hydratase and epimerase and
isomerase/3-hydroxyacyl-CoA dehydrogenase [Escherichia
coli BL21(DE3)]
gi|323961413|gb|EGB57024.1| fatty oxidation complex [Escherichia coli H489]
gi|323970943|gb|EGB66194.1| fatty oxidation complex [Escherichia coli TA007]
gi|441652160|emb|CCQ02292.1| Enoyl-CoA hydratase [Escherichia coli O5:K4(L):H4 str. ATCC 23502]
Length = 714
Score = 338 bits (868), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 228/713 (31%), Positives = 363/713 (50%), Gaps = 33/713 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I ++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIQVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKERPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA I V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDAS 651
++ P+I G+ ++ ++ E + ++NE+ R ++E ++ D D +
Sbjct: 600 AIYPLI-------GAHGQGR---LSAPQVAERCVMLMLNEAVRCVDEQVIRSVRDGDIGA 649
Query: 652 VLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 650 VFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>gi|432490018|ref|ZP_19731891.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE213]
gi|432543952|ref|ZP_19780795.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE236]
gi|432549442|ref|ZP_19786210.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE237]
gi|432622592|ref|ZP_19858623.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE76]
gi|432719461|ref|ZP_19954430.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE9]
gi|432840044|ref|ZP_20073511.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE140]
gi|433203958|ref|ZP_20387732.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE95]
gi|431020293|gb|ELD33649.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE213]
gi|431074362|gb|ELD81926.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE236]
gi|431079720|gb|ELD86674.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE237]
gi|431159392|gb|ELE59949.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE76]
gi|431263273|gb|ELF55262.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE9]
gi|431388782|gb|ELG72504.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE140]
gi|431720963|gb|ELJ84965.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE95]
Length = 714
Score = 338 bits (868), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 228/713 (31%), Positives = 365/713 (51%), Gaps = 33/713 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIANCKTAQEAEALARQGQQLMAE-IHALPVPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 MCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPQSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDRQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K +VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTAIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDAS 651
++ P+I G+ ++ ++ E + ++NE+ R L+E ++ D D +
Sbjct: 600 AIYPLI-------GTQGQGR---LSAPQVAERCVMLMLNEAVRCLDEQVIRSVRDGDIGA 649
Query: 652 VLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
V G+ FP + GG + D++GA V +++ + YG+ F P L E + +G
Sbjct: 650 VFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMSKRG 702
>gi|82544822|ref|YP_408769.1| multifunctional fatty acid oxidation complex subunit alpha
[Shigella boydii Sb227]
gi|417682956|ref|ZP_12332309.1| fatty oxidation complex, alpha subunit FadJ [Shigella boydii
3594-74]
gi|420353732|ref|ZP_14854839.1| fatty oxidation complex, alpha subunit FadJ [Shigella boydii
4444-74]
gi|123728354|sp|Q31YB7.1|FADJ_SHIBS RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|81246233|gb|ABB66941.1| putative enzyme [Shigella boydii Sb227]
gi|332093640|gb|EGI98698.1| fatty oxidation complex, alpha subunit FadJ [Shigella boydii
3594-74]
gi|391277867|gb|EIQ36592.1| fatty oxidation complex, alpha subunit FadJ [Shigella boydii
4444-74]
Length = 714
Score = 338 bits (868), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 230/715 (32%), Positives = 364/715 (50%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAIITIDVPDEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTVQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S +EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTTLEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTKGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R ++E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVSERCVMLMLNEAVRCVDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>gi|221135313|ref|ZP_03561616.1| multifunctional fatty acid oxidation complex subunit alpha
[Glaciecola sp. HTCC2999]
Length = 708
Score = 338 bits (868), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 242/701 (34%), Positives = 364/701 (51%), Gaps = 32/701 (4%)
Query: 12 NDGVAIITLI--NPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLT-GNGGRFSGGFDIN 68
+ G+AI+++ N +N L + E +K IVLT G F G D++
Sbjct: 14 DSGIAILSMDVPNESMNVLKAEFAGEIDTLLNEIQQDTSIKGIVLTSGKDNSFMAGADVS 73
Query: 69 VFQKVHGAGDVSLMPDVSV--ELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA 126
+ A + D++ + + I D P++AA+ G ALGGGLELA+ CH RI +
Sbjct: 74 MLAACTSAQQAT---DIARGGQAIFRRITDLPIPVIAAIHGPALGGGLELALACHGRICS 130
Query: 127 --PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVV 181
T +GLPE+ LG++PG TQRLPRL+ L +A++MML S+ +++ K G++DAVV
Sbjct: 131 DDSSTVVGLPEVQLGLLPGSTGTQRLPRLIALQQALKMMLTGGSVRAKQAKKYGIVDAVV 190
Query: 182 TSEELLKVSRLWALDIAARRKPWIRSL-HRTDKLGSLSEAREVL--KLARLQAKKTAPNM 238
L+ + AL +RK +SL +R L + + R +L + + KKT N
Sbjct: 191 PRSILMAEAEKMALAGQPKRKAIKKSLVNRF--LENTTVGRGILFSQAKKQLLKKTQGNY 248
Query: 239 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDI 298
P +A L+ I+ G+ G +G+ EA+ F ELVM SR L +FFA K V D+
Sbjct: 249 PAPEAILECIQTGLDKGLETGLNIEAQRFGELVMTPESRALRSIFFATTEMKKESGVADV 308
Query: 299 GLKPRGVRKVAVIGGGLMGSGIA-TAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 357
V KV V+GGGLMG GIA + + V +K++N++ + + T + V
Sbjct: 309 --PAEAVNKVGVLGGGLMGGGIAFVSATKAKVPVRIKDINAQGIKNAMNTAYGILHKRVK 366
Query: 358 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 417
R L + L ++ G DYS FKD DMVIEAV E V LKQ + +++E C + I A
Sbjct: 367 RRILRHSQMQQQLALITGTTDYSGFKDTDMVIEAVFEDVGLKQAMVADVEANCRENTIFA 426
Query: 418 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 477
+NTS+I + + K + + +IG H+FSP MPL E++ E TS + I + + K
Sbjct: 427 SNTSSIPIRQIAAKAARPENVIGLHYFSPVDKMPLAEVIAHEGTSDRTISNTVAFAKKQG 486
Query: 478 KVPVVVGNCTGFAVNRAFFPY-SQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY S+SA ++++ G + ID + FG P+GP +LLD G
Sbjct: 487 KTPIVVKDGAGFYVNRILAPYMSESAEMILA-GEPIDNIDKTLVKFGFPVGPVKLLDEVG 545
Query: 537 YGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPI 596
V F DR D +L+ R GK NGKG Y Y K K +
Sbjct: 546 IDVGTKIIPILQADFGDRFAAPDAFDKVLQDDRKGKKNGKGFYDYSSKHKGK------VV 599
Query: 597 IEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMS 656
E L NI P ++ EI++ ++ ++NE+ R L+EG+V A D D ++ G+
Sbjct: 600 DESIYSLLNIKPNSH---LSNDEIIQRSVYMMLNEAARCLDEGVVRSARDGDIGAIFGIG 656
Query: 657 FPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 697
FP + GG + D +G + + L ++Q YGN F P+ L
Sbjct: 657 FPPFLGGPFSYMDTIGISNLVERLDYFAQKYGNKFTPAPIL 697
>gi|254447746|ref|ZP_05061211.1| fatty acid oxidation complex alpha subunit [gamma proteobacterium
HTCC5015]
gi|198262526|gb|EDY86806.1| fatty acid oxidation complex alpha subunit [gamma proteobacterium
HTCC5015]
Length = 766
Score = 338 bits (868), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 233/712 (32%), Positives = 363/712 (50%), Gaps = 31/712 (4%)
Query: 8 MEVGNDGVAIITLINPP---VNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
+ V +D V +I IN P N L + D ++ + +K +VL + G F
Sbjct: 59 LRVRDDKVGVIE-INVPGEAQNTLKAEFAEQMDDVMDQVRRQAGLKGLVLISTKPGSFVA 117
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+F + +V + + IED P+VAA+EG LGGGLELAM CH R
Sbjct: 118 GADINLFDSIGSKQEVVELSK-TCHRGFKAIEDLNIPVVAAIEGACLGGGLELAMACHYR 176
Query: 124 IAAPK--TQLGLPELTLGVIP---GTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+A+ + T LG+PE+ LG++P GTQRLPRLVG+ A+++ML S+ + ++ K+GLID
Sbjct: 177 VASSRSNTALGVPEVMLGLLPAGGGTQRLPRLVGIPAALDLMLTSRQLKPKQALKMGLID 236
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEARE------VLKLARLQA- 231
+V SE L + + AL A R L + + L L+ + V AR QA
Sbjct: 237 QIVGSEALEERAVALALKSTAPRPAKSMELSQ-EALQELALEKNPVGRKVVFDQARKQAA 295
Query: 232 KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 291
KKT N P + + +E+G HG +G +EA+ F +L M D S+ L +F A A K
Sbjct: 296 KKTYGNYPAPERIIGAVEKGFSHGIEAGYEEEAQAFGDLAMSDVSKQLRGIFHATNALKK 355
Query: 292 VPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEA 350
V D ++ R + +V V+G GLMG+GIA + + V LK+ +++ L G+ +
Sbjct: 356 ETFVADESVETRTIERVGVLGAGLMGAGIALNTVAKAKLPVRLKDRDAKGLSHGVGYVAK 415
Query: 351 NVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKAC 410
G ++Q A A + + Y+ FK +D+V+EAV E + LK ++ + E
Sbjct: 416 YYDKRAKLGAMSQFDAEAAKRQVTYTDQYTGFKRLDLVVEAVFEDLGLKHQMLKDTEANG 475
Query: 411 PPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLM 470
+ I A+NTS+I ++ + + + +IG H+FSP MPLLEI+ T++T+ +V +
Sbjct: 476 NENTIFASNTSSIPISDIAKAAKRPENVIGLHYFSPVEKMPLLEIITTDKTAPEVTKGCV 535
Query: 471 TVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 530
GK K +VV + GF R PY A L+ GV +D A++ FG P+GP
Sbjct: 536 AFGKAQGKTVIVVKDGPGFYTTRILAPYLNEASRLLLEGVGPKELDKALQQFGYPVGPIT 595
Query: 531 LLDLAGYGVAAATSKEFDKAFPDRSFQSP-LVDLLLKSGRNGKANGKGLYTYEKGSKPKP 589
LLD G V + AF +R QSP D +++ G G+ GKG Y Y G K K
Sbjct: 596 LLDEVGIDVGTKVGPVLEAAFGER-MQSPDAADRMIEKGFLGRKAGKGFYLYGDGVKGK- 653
Query: 590 DPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
P+ +E N+ P P V E ++ +NE+ L+EGI+ + D
Sbjct: 654 -----PVNQEVFDAMNVTPWKNPDLVAAAERCTWMM---INEAAFCLQEGIIQQPMHGDI 705
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERA 701
++ G+ FP + GG + D++G L+ ++ +G F+P++ L + A
Sbjct: 706 GAIFGLGFPPFLGGPFRYMDSLGLQASVQKLETLAERHGEHFQPAQILVDMA 757
>gi|170682519|ref|YP_001744544.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli SMS-3-5]
gi|254788653|sp|B1LME7.1|FADJ_ECOSM RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|170520237|gb|ACB18415.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
SMS-3-5]
Length = 714
Score = 338 bits (868), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 230/719 (31%), Positives = 367/719 (51%), Gaps = 37/719 (5%)
Query: 3 APRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGG 59
A T+ V D +AIIT+ P +N L + ++ ++ +++ +V +
Sbjct: 4 ASAFTLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPD 63
Query: 60 RFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMG 119
F G DIN+ A + ++ +L+ I P++AA+ G LGGGLELA+
Sbjct: 64 NFIAGADINMIGNCKTAQEAEVLARQGQQLMAE-IHALPVPVIAAIHGACLGGGLELALA 122
Query: 120 CHARIAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKL 174
CH R+ KT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KL
Sbjct: 123 CHGRVCTDDAKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKL 182
Query: 175 GLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAK 232
GL+D VV LL+ A+++A + +P R L +++ G L A + +
Sbjct: 183 GLVDDVVPQSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEH 238
Query: 233 KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 292
KT N P + L+V+E G+ G SG EA+ F EL M S+ L ++FFA K
Sbjct: 239 KTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASTEVKK- 297
Query: 293 PNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANV 352
+ +D P + G G TA + V +K++N + + +K +
Sbjct: 298 DSGSDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLSVRIKDINPQGINHALKYSWDQL 356
Query: 353 RGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPP 412
G V R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C
Sbjct: 357 EGKVRRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCAT 416
Query: 413 HCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTV 472
H I A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + +
Sbjct: 417 HTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKL 476
Query: 473 GKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLL 532
K K P+VV + GF VNR PY A +++ G + ID+A+ FG P+GP QLL
Sbjct: 477 AKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHIDAALVKFGFPVGPIQLL 536
Query: 533 DLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP 589
D G + A+ +R F +P +V +L R G+ NG+G Y Y +KG K K
Sbjct: 537 DEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKK 595
Query: 590 --DPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRAS 645
DP++ P+I + RLS ++ E + ++NE+ R L+E ++
Sbjct: 596 QVDPAIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCLDEQVIRSVR 643
Query: 646 DLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
D D +V G+ FP + GG + D++GA V +++ + YG+ F P L E + +G
Sbjct: 644 DGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMSKRG 702
>gi|218548205|ref|YP_002381996.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia fergusonii ATCC 35469]
gi|254788652|sp|B7LLD0.1|FADJ_ESCF3 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|218355746|emb|CAQ88359.1| fused enoyl-CoA hydratase and epimerase and isomerase ;
3-hydroxyacyl-CoA dehydrogenase [Escherichia fergusonii
ATCC 35469]
Length = 714
Score = 338 bits (868), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 240/714 (33%), Positives = 371/714 (51%), Gaps = 35/714 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +A++T+ P +N L A ++ +E +++ +V ++ F
Sbjct: 8 TLNVRLDHIAVVTIDVPGEKMNTLKAEFAAQVRAILKEIRENKEIRGVVFISAKADNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ + A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIDHCNTAMEAETLARQGQQLMAE-IHALPVPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
I PKT LGLPE+ LG++PG TQRLPRLVGLS A++M+L K + + K GL+D
Sbjct: 127 ICTDDPKTILGLPEVQLGLLPGSGGTQRLPRLVGLSTALDMILTGKQLRPGQALKSGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
+V LL+ A++ A + + RSL +++ G L + +++ +KT
Sbjct: 187 EIVPQSILLQA----AVERAKQERQTPRSLPVRERILAGPLGRSLLFRFVSKKTDQKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P LDVIE G+ G SG EA+ F EL M S+ L ++FFA K P T
Sbjct: 243 NYPATTRILDVIETGLSQGSSSGYDAEARAFGELAMTSQSQSLRNIFFASTEVKKDPGST 302
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEANVRGL 355
++P + + ++GGGLMG GIA + V +K++N + + +K +
Sbjct: 303 ---VQPGTLDSIGILGGGLMGGGIAFVTACKAGLPVRIKDINPQGINHALKYSWQLLDAK 359
Query: 356 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCI 415
V R + + L + G DY F D+VIEAV E + LKQ++ +E+EK C H I
Sbjct: 360 VRRRHIKAGEQARQLAKISGTTDYQGFAHRDVVIEAVFEDLSLKQQMVAEVEKNCGLHTI 419
Query: 416 LATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKI 475
A+NTS+I ++ + + +++IG HFFSP MPL+E++ TS + I ++ + K
Sbjct: 420 FASNTSSIPISDIAAHATRPEQVIGLHFFSPVEKMPLVEVIPHAATSEKTIATIVKLAKK 479
Query: 476 IKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLA 535
K P+VV + GF VNR PY A L++ G V ID+A+ FG P+GP QLLD
Sbjct: 480 QGKTPIVVQDKAGFYVNRILAPYINEAIRLLTEGEKVETIDTALVKFGFPVGPIQLLDEV 539
Query: 536 GYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--D 590
G + A+ +R F +P +V +L R G+ NG+G Y Y KG K K D
Sbjct: 540 GIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGAKGRKSKKQVD 598
Query: 591 PSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDA 650
P + II + G +S ++I E + ++NE+ R EG++ A D D
Sbjct: 599 PEIYKIIA--------VQGQSKLSA--QQITERCVMLMLNEAARCYREGVIRHARDGDIG 648
Query: 651 SVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA+ V L++ + LYG+ F P L + A +G
Sbjct: 649 AVFGIGFPPFLGGPFRYMDSLGASEVVAVLQRLTSLYGSRFTPCEQLLQMAERG 702
>gi|126731621|ref|ZP_01747426.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Sagittula stellata E-37]
gi|126707787|gb|EBA06848.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Sagittula stellata E-37]
Length = 650
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 232/659 (35%), Positives = 347/659 (52%), Gaps = 29/659 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+AI+T+ NPPVNA+ + + GL D E + + ++A+VL G F G D+ F +
Sbjct: 11 IAIVTIDNPPVNAVGLAVRQGLWDAVERTEADETIRAVVLACAGRTFIAGADVTEFDQAP 70
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
A +PD+ + LIE KP VAAV G ALGGGLE AM CH RI +LGLP
Sbjct: 71 VA---PHLPDLLL-----LIERATKPWVAAVHGTALGGGLETAMACHHRIMDAGAKLGLP 122
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 191
E+TLGVIPG T RLPRLV A++M+ K I++ E + GL DAV + L +
Sbjct: 123 EVTLGVIPGAGGTVRLPRLVAAETALQMITTGKPISASEAVQAGLADAVAVQDVLAE--- 179
Query: 192 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 251
A+D+A R P L D+ + A + K A +A + +
Sbjct: 180 --AIDLA-RTAPAPTPL--LDRAAQAPTDPVLWDAAAAKILKKAAGQTAPKAAVQALRNA 234
Query: 252 IVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVI 311
+ + E + F L S L H+FFA+RAT++V + G+ PR + ++ +I
Sbjct: 235 YEMDAQAALAAERETFLTLRSAPQSAALRHIFFAERATARVDRIK--GVAPRPLNRIGII 292
Query: 312 GGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALK 371
GGG MG+GIA A +L+ V + E +++ G + + G + RG ++ ++ ++ +
Sbjct: 293 GGGTMGAGIAAACLLSGYSVQMIERDADAAEAGKARVSGTLDGSLKRGLISTEQHDSMTR 352
Query: 372 MLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEK 431
YS D D+VIEAV E + +K+K+F+++E A P I+ATNTS +D+N +
Sbjct: 353 AFAASDSYSALGDTDLVIEAVFEDMEVKKKVFAQIEAAVGPDAIIATNTSYLDVNEIAAS 412
Query: 432 TSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAV 491
T + R++G HFFSPAH+M LLEIV + S Q + + K ++K+PV+ G C GF
Sbjct: 413 TGTPSRVVGLHFFSPAHIMKLLEIVVPDGVSDQTLATAVAFAKSLRKIPVLAGVCDGFIA 472
Query: 492 NRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAF 551
NR Y + A ++ G + +D+A+ FGLP+G FQ+ DLAG ++ A K
Sbjct: 473 NRIMSAYRREAEYMIEDGALPWEVDAAMVGFGLPMGIFQMGDLAGLDISWAMRKRQAATR 532
Query: 552 PDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPII--EECRRLSNIMPG 609
+ D L + GR G+ G+G Y YE GSK PDP V +I E R+ + P
Sbjct: 533 DPAERYVEIGDKLCEMGRFGRKTGRGYYLYEDGSKGTPDPEVEALILAESARKGIDRQP- 591
Query: 610 GKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWA 668
+T +EI+ IL + E ++L EGI A D+D V FP +RGG ++ A
Sbjct: 592 -----MTAEEIMRRILGAMQAEGRKILAEGIARSADDIDVVMVNAYGFPRWRGGPMYMA 645
>gi|193062429|ref|ZP_03043524.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli E22]
gi|194428643|ref|ZP_03061181.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli B171]
gi|260844928|ref|YP_003222706.1| fused enoyl-CoA hydratase and epimerase and
isomerase/3-hydroxyacyl-CoA dehydrogenase [Escherichia
coli O103:H2 str. 12009]
gi|300922044|ref|ZP_07138187.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
182-1]
gi|301328848|ref|ZP_07221890.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
78-1]
gi|415796919|ref|ZP_11497888.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
E128010]
gi|417176510|ref|ZP_12006306.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
3.2608]
gi|417182738|ref|ZP_12009295.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
93.0624]
gi|417251364|ref|ZP_12043129.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
4.0967]
gi|417624234|ref|ZP_12274533.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
STEC_H.1.8]
gi|419290283|ref|ZP_13832375.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC11A]
gi|419295614|ref|ZP_13837659.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC11B]
gi|419301070|ref|ZP_13843069.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC11C]
gi|419307202|ref|ZP_13849101.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC11D]
gi|419312208|ref|ZP_13854070.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC11E]
gi|419323797|ref|ZP_13865490.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC12B]
gi|419329765|ref|ZP_13871369.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC12C]
gi|419335408|ref|ZP_13876934.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC12D]
gi|419340793|ref|ZP_13882257.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC12E]
gi|419869598|ref|ZP_14391801.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O103:H2 str. CVM9450]
gi|420392098|ref|ZP_14891349.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli EPEC
C342-62]
gi|422956299|ref|ZP_16968773.1| fatty acid oxidation complex subunit alpha [Escherichia coli H494]
gi|450218921|ref|ZP_21896052.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O08]
gi|192932095|gb|EDV84694.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli E22]
gi|194413366|gb|EDX29650.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli B171]
gi|257760075|dbj|BAI31572.1| fused enoyl-CoA hydratase and epimerase and
isomerase/3-hydroxyacyl-CoA dehydrogenase [Escherichia
coli O103:H2 str. 12009]
gi|300421581|gb|EFK04892.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
182-1]
gi|300844797|gb|EFK72557.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
78-1]
gi|323162246|gb|EFZ48105.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
E128010]
gi|345377195|gb|EGX09127.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
STEC_H.1.8]
gi|371599834|gb|EHN88612.1| fatty acid oxidation complex subunit alpha [Escherichia coli H494]
gi|378130084|gb|EHW91454.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC11A]
gi|378141456|gb|EHX02672.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC11B]
gi|378148185|gb|EHX09325.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC11D]
gi|378150686|gb|EHX11801.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC11C]
gi|378157836|gb|EHX18867.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC11E]
gi|378164873|gb|EHX25814.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC12B]
gi|378170081|gb|EHX30967.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC12C]
gi|378181287|gb|EHX41959.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC12D]
gi|378187704|gb|EHX48315.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC12E]
gi|386179202|gb|EIH56681.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
3.2608]
gi|386184591|gb|EIH67330.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
93.0624]
gi|386218213|gb|EII34696.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
4.0967]
gi|388342192|gb|EIL08244.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O103:H2 str. CVM9450]
gi|391311865|gb|EIQ69488.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli EPEC
C342-62]
gi|449317370|gb|EMD07460.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O08]
Length = 714
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 231/715 (32%), Positives = 364/715 (50%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNSAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R ++E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCVDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>gi|397164597|ref|ZP_10488052.1| fatty oxidation complex, alpha subunit FadJ [Enterobacter
radicincitans DSM 16656]
gi|396093745|gb|EJI91300.1| fatty oxidation complex, alpha subunit FadJ [Enterobacter
radicincitans DSM 16656]
Length = 715
Score = 338 bits (867), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 230/714 (32%), Positives = 356/714 (49%), Gaps = 33/714 (4%)
Query: 7 TMEVGNDGVAIITLI--NPPVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T V D +A++T+ N +N L ++ ++ ++ +V ++ F
Sbjct: 8 TFNVRPDNIAVVTIDVPNEKMNTLKAEFAGEVRAMLKQIRDNKALRGVVFISAKADNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ + A + + +++ I P+VAA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIARCQTAKEAEDLARQGQQVMAE-IHALSIPVVAAIHGACLGGGLELALACHRR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
I KT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + + K+GL+D
Sbjct: 127 ICTDDAKTMLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRPRQALKVGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+D+A + +P R L +++ G L A +++ +KT
Sbjct: 187 DVVPQSILLEA----AVDLAKQGRPVARHLPVRERVLAGPLGRALLFRMVSKKTEQKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P L VIE G+ G SG EA+ F +L M S+ L H+FFA K P +
Sbjct: 243 NYPAATRILSVIETGLTQGRSSGYDAEARAFGQLAMTPQSQALRHLFFASTGVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
++ P V G G TA + V +K++N++ + +K + V
Sbjct: 302 EVQAGPLNTIGVLGGGLMGGGIAFVTAS-KAGLPVRIKDINAKGINHALKYSWEELDKKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L + G LD+S F D+VIEAV E + LKQK+ +E+E C H I
Sbjct: 361 RRRYLKAGERDKQLAKISGTLDFSGFAQRDLVIEAVFEDLALKQKMVAEVEAHCSAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + ++IIG HFFSP MPL+E++ T Q I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEKIIGLHFFSPVEKMPLVEVIPHAGTDEQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A L+S G + ID A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVADKAGFYVNRILAPYINEAIRLLSEGECIEDIDRALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTYE---KGSKPKPDP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y + SK +PDP
Sbjct: 541 IDTGTKIIPVLESAYGER-FSAPASIVSAILNDDRKGRKNGRGFYLYPAKGRKSKKQPDP 599
Query: 592 SVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDAS 651
++ P+I GG+ ++ +++ E + ++NE+ R +E ++ A D D +
Sbjct: 600 AIYPLI-------GASGGGR---LSAEQMAERCVLLMLNEAVRCFDEQVIRSARDGDIGA 649
Query: 652 VLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGI 705
V G+ FP + GG + GA V L++ YG F P L A +G+
Sbjct: 650 VFGIGFPPFLGGPFHYIATSGAGDVVARLQRLEAQYGARFAPCEPLLRMAEQGV 703
>gi|432948212|ref|ZP_20143368.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE196]
gi|433043916|ref|ZP_20231411.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE117]
gi|431458190|gb|ELH38527.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE196]
gi|431555754|gb|ELI29593.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE117]
Length = 714
Score = 338 bits (867), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 230/715 (32%), Positives = 362/715 (50%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQKLMAE-IHALPVPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT L LPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLSLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPSTDRILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA I V +K++N + + +K + G V
Sbjct: 302 DAPPTPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R ++E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCVDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>gi|332307025|ref|YP_004434876.1| fatty acid oxidation complex subunit FadJ [Glaciecola sp.
4H-3-7+YE-5]
gi|332174354|gb|AEE23608.1| fatty acid oxidation complex, alpha subunit FadJ [Glaciecola sp.
4H-3-7+YE-5]
Length = 717
Score = 338 bits (867), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 244/713 (34%), Positives = 370/713 (51%), Gaps = 38/713 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPI---VAGLKDKFEEATSRDDVKAIVLTGNGGRF 61
T+ +DG+AI+++ P +N L + V + D+ E +S V +V++G F
Sbjct: 17 TLTKRDDGIAILSMDVPGETMNTLKVEFGDQVGAMLDQIESDSSIKGV--VVISGKDNSF 74
Query: 62 SGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCH 121
G DI++ A + + + V IED P VAA+ G ALGGGLELA+ CH
Sbjct: 75 VAGADISMLAGCKSAEEAQAIGQGG-QAVFQRIEDMSVPFVAAIHGPALGGGLELALACH 133
Query: 122 ARIAAP--KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGL 176
R+ + KTQLGLPE+ LG++PG TQRLPRL+ + +A++MML ++ +++ K G+
Sbjct: 134 MRVCSDDDKTQLGLPEVQLGLLPGSGGTQRLPRLISVQQAMKMMLTGSAVRAKQAKKYGI 193
Query: 177 IDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEA-----REVLKLARLQA 231
+D +V LL V A+++A + KP R + D +G E + + K AR Q
Sbjct: 194 VDDMVPRSILLDV----AIEMAKKSKPK-RKPVKLDLMGQFLERTPMGRKLMFKQARKQT 248
Query: 232 K-KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATS 290
+ KT N P + +D IE G+ G G EA+ F LVM S L +FFA
Sbjct: 249 QAKTLGNYPSPERIIDCIETGLEKGNAQGYALEAQHFGHLVMTPESAALRSLFFATTEMK 308
Query: 291 KVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIE 349
K V G+ P ++K+ V+GGGLMG GIA + V +K++ S+ + +K
Sbjct: 309 KENGVE--GVAPNALKKIGVLGGGLMGGGIAFVTATKAKLPVRIKDIRSDGIAHAMKYSY 366
Query: 350 ANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKA 409
+ V R + + + L L G +DY F + D+VIEAV E + LKQ + +++E
Sbjct: 367 DILSKKVKRRFMLHSQMQSQLSRLTGSVDYVGFDNTDVVIEAVFEDLALKQNMVADVETH 426
Query: 410 CPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDL 469
C H I A+NTS+I + + + +IG H+FSP MPL E++ E TS Q I
Sbjct: 427 CSEHTIFASNTSSIPIGQIAANAKRPENVIGLHYFSPVDKMPLAEVIAHEGTSDQTISTT 486
Query: 470 MTVGKIIKKVPVVVGNCTGFAVNRAFFPY-SQSARLLVSLGVDVFRIDSAIRSFGLPIGP 528
+ + K K P+VV + GF VNR PY ++SA +L++ G + +ID A+ FG P+GP
Sbjct: 487 VELAKKQGKTPIVVKDGAGFYVNRILAPYMNESAEILLA-GEPIEQIDRALVKFGFPVGP 545
Query: 529 FQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK 588
+LLD G V S F +R +P D LL R GK N +G Y YE G KP
Sbjct: 546 IKLLDEVGIDVGTKISPILVAEFGERFSSAPGFDKLLADDRKGKKNKRGFYNYE-GKKPG 604
Query: 589 PDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLD 648
+ + E L I P + ++E I E + ++NE+ L+EG+V A D D
Sbjct: 605 KE-----VDESVYDLLGITPSSR---LSESTIAERCVLLMLNEAAMCLDEGVVRSARDGD 656
Query: 649 DASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERA 701
++ G+ FP + GG + D++G V L + Q +G+ F P++ L E A
Sbjct: 657 IGAIFGIGFPPFLGGPFRYMDSLGIQQVVERLSHYQQQFGDKFTPAKCLVEMA 709
>gi|345300205|ref|YP_004829563.1| Fatty acid oxidation complex subunit alpha [Enterobacter asburiae
LF7a]
gi|345094142|gb|AEN65778.1| Fatty acid oxidation complex subunit alpha [Enterobacter asburiae
LF7a]
Length = 715
Score = 338 bits (867), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 241/712 (33%), Positives = 367/712 (51%), Gaps = 31/712 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ + D VA++T+ P +N L ++ ++ +++ +V ++ F
Sbjct: 8 TLNIRPDNVAVVTIDVPGEKMNTLKAEFGVQVRAMLKQIRENKELRGLVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ + + A + + +++ I P++AA+ G LGGGLELA+ CH+R
Sbjct: 68 GADINMIARANNALEAEELARQGQQVMAE-IHALPVPVIAAIHGACLGGGLELALACHSR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
I KT LGLPE+ LG++PG TQRLPRLVG+S A+EM+L K + + + K GL+D
Sbjct: 127 ICTDDAKTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALEMILTGKQLRARQALKTGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 238
VV LL+ + AL + KP + R G L A + + A+KT N
Sbjct: 187 EVVPYSILLEAAVERALK-GRQAKPHLPVRERI-LAGPLGRALLFSMVGKKTAQKTKGNY 244
Query: 239 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDI 298
P L+VIE G+ HG SG EAK F EL M S+ L +FFA K P
Sbjct: 245 PATTRILEVIETGLAHGSSSGYAAEAKAFGELAMTPQSQALRSIFFASTDVKKDPGSD-- 302
Query: 299 GLKPRGVRKVAVIGGGLMGSGIA-TAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 357
+P +R V V+GGGLMG GIA + V +K++N + + ++ + V
Sbjct: 303 -AEPASLRAVGVLGGGLMGGGIAFVTASKGKLPVRIKDINPKGINHALQYSWQQLDQKVK 361
Query: 358 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 417
R + + + L ++ G DYS F D+VIEAV E + LKQK+ +++E+ C PH I A
Sbjct: 362 RRHIKASERDKVLALISGTTDYSGFAHRDLVIEAVFEDLALKQKMVADVEQYCAPHTIFA 421
Query: 418 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 477
+NTS++ + + + +++IG HFFSP MPL+E++ TS Q I ++ + K+
Sbjct: 422 SNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEVIPHATTSPQTIATVVKLAKMQG 481
Query: 478 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGY 537
K PVVV + GF VNR PY A L++ G + +D ++ FG P+GP QLLD G
Sbjct: 482 KTPVVVADKAGFYVNRILAPYINEAMRLLTEGEKIEHVDESLVKFGFPVGPIQLLDEVGI 541
Query: 538 GVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DPS 592
+ A+ DR F P +V ++LK R G+ N +G Y Y +KG K K DPS
Sbjct: 542 DTGTKIIPVLEAAYGDR-FSPPANIVSVILKDDRKGRKNERGFYLYAQKGRKSKKQVDPS 600
Query: 593 VLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASV 652
V +I + GK +V E M++ +NE+ R E ++ A D D +V
Sbjct: 601 VYGLISATGQ-------GKLSAVQCAERCVMMM---LNEAARCFGEQVIKSARDGDIGAV 650
Query: 653 LGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
G+ FP + GG + D +GA V +L++ + YG F P L + A +G
Sbjct: 651 FGIGFPPFLGGPFRYMDTLGAGEVVATLQRLATQYGPRFTPCDELLQMAERG 702
>gi|307311099|ref|ZP_07590743.1| fatty acid oxidation complex, alpha subunit FadJ [Escherichia coli
W]
gi|378712225|ref|YP_005277118.1| fatty acid oxidation complex subunit FadJ [Escherichia coli KO11FL]
gi|386609716|ref|YP_006125202.1| fused enoyl-CoA hydratase and epimerase and
isomerase/3-hydroxyacyl-CoA dehydrogenase [Escherichia
coli W]
gi|386700686|ref|YP_006164523.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli KO11FL]
gi|386710202|ref|YP_006173923.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli W]
gi|306908605|gb|EFN39102.1| fatty acid oxidation complex, alpha subunit FadJ [Escherichia coli
W]
gi|315061633|gb|ADT75960.1| fused enoyl-CoA hydratase and epimerase and
isomerase/3-hydroxyacyl-CoA dehydrogenase [Escherichia
coli W]
gi|323377786|gb|ADX50054.1| fatty acid oxidation complex, alpha subunit FadJ [Escherichia coli
KO11FL]
gi|383392213|gb|AFH17171.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli KO11FL]
gi|383405894|gb|AFH12137.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli W]
Length = 714
Score = 338 bits (867), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 231/715 (32%), Positives = 363/715 (50%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E + LKQ++ +E+E+ H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFEDLELKQQMVAEVEQNSAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R ++E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCVDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>gi|312973398|ref|ZP_07787570.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
1827-70]
gi|310331993|gb|EFP99228.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
1827-70]
Length = 714
Score = 338 bits (867), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 229/715 (32%), Positives = 364/715 (50%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++ + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELVKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R ++E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCVDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E + +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMSKRG 702
>gi|343502937|ref|ZP_08740774.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
tubiashii ATCC 19109]
gi|418478661|ref|ZP_13047758.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
tubiashii NCIMB 1337 = ATCC 19106]
gi|342812921|gb|EGU47906.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
tubiashii ATCC 19109]
gi|384573696|gb|EIF04186.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
tubiashii NCIMB 1337 = ATCC 19106]
Length = 707
Score = 338 bits (867), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 217/653 (33%), Positives = 348/653 (53%), Gaps = 25/653 (3%)
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
F G D+ + A + + + ++ L D P+VAA+ G LGGGLELA+ C
Sbjct: 66 FIAGADVRMLDACTSAKEAQALAEKGQQMFQQL-SDLPYPVVAAIHGPCLGGGLELALAC 124
Query: 121 HARIAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLG 175
R+ + KT+LGLPE+ LG++PG TQRLPRL+GL +++M+L K + +++ KLG
Sbjct: 125 DYRVCSDSEKTRLGLPEVQLGLLPGSGGTQRLPRLIGLLPSLDMILTGKQLRAKKAKKLG 184
Query: 176 LIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVL--KLARLQAKK 233
+ DAVV LL V++ + A ++K + + + + R+V+ + A+ K
Sbjct: 185 VADAVVPHTVLLDVAKSFVEKHAGKKKAKRKVSTKEKLISNTGLGRKVIFEQAAKKTNDK 244
Query: 234 TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 293
T N P A L VI G+ G G KEA+ F ELVM S+ L +FFA T+++
Sbjct: 245 TRGNYPAADAILQVIRFGLEKGFEKGQKKEAERFGELVMTSESKALRSIFFA---TTEMK 301
Query: 294 NVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEANV 352
+P+ + + AV+GGGLMG+GI+ + + V +K+V+++ +L +K
Sbjct: 302 KEHGGDAQPKPIARAAVLGGGLMGAGISHVSVAKAKVPVRIKDVSNDGVLNALKYNYKLF 361
Query: 353 RGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPP 412
R L++ + + + L G D++ F D+VIEAV E + LKQ++ +++E
Sbjct: 362 EKQRKRHILSKAQLQSKMLQLSGGTDFTRFNHTDIVIEAVFEDLNLKQQMVADIESNAKD 421
Query: 413 HCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTV 472
I ATNTS++ ++ + EK + ++G H+FSP MPL+E++ + TS + I ++
Sbjct: 422 STIFATNTSSLPIHQIAEKAERPENVVGLHYFSPVEKMPLVEVIPHQGTSDETISTVVEF 481
Query: 473 GKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLL 532
+ K P+VV +C GF VNR PY A ++ G + ++D+A+ +FG P+GP LL
Sbjct: 482 ARKQGKTPIVVKDCAGFYVNRILAPYMNEAAQVLLTGEPIEQLDTALLNFGFPVGPITLL 541
Query: 533 DLAGYGVAAATSKEFDKAFPDRSFQSPLV-DLLLKSGRNGKANGKGLYTYEKGSKPKPDP 591
D G + A +R FQ P V D LL R G+ +GKG YTY KG K + D
Sbjct: 542 DEVGVDIGAKIMPILVAELGER-FQGPDVFDKLLNDDRKGRKSGKGFYTY-KGKKKEVDK 599
Query: 592 SVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDAS 651
SV +L ++ P K + EK+I + P++NE+ R L+EGI+ D D +
Sbjct: 600 SVY-------KLLSLSPESK---LAEKDIAMRCVLPMLNEAVRCLDEGIIRSPRDGDIGA 649
Query: 652 VLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+ G+ FP + GG + D +G + + + +Q YG+ F P L RA G
Sbjct: 650 IFGIGFPPFLGGPFRYMDQIGIEKLVEIMNEHAQKYGDRFAPCDGLLTRAGIG 702
>gi|386614955|ref|YP_006134621.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
UMNK88]
gi|332344124|gb|AEE57458.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
UMNK88]
Length = 714
Score = 338 bits (867), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 229/715 (32%), Positives = 363/715 (50%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++ + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELVKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R ++E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCVDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>gi|154244865|ref|YP_001415823.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Xanthobacter
autotrophicus Py2]
gi|154158950|gb|ABS66166.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Xanthobacter
autotrophicus Py2]
Length = 686
Score = 338 bits (867), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 236/687 (34%), Positives = 357/687 (51%), Gaps = 54/687 (7%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+DGVA++T+ NPPVN + + GL+ ++A + + +VLTG G F G D F
Sbjct: 10 DDGVALVTIDNPPVNVTSQAVRQGLQRALDQAEAAGAGR-VVLTGAGKTFIAGADAREFA 68
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
A +PD+ + IE P+VAA+ G ALGGGLE+A+ C ARIAAP L
Sbjct: 69 A---APVEPHLPDI-----IRRIEAFPVPVVAAINGAALGGGLEVALACRARIAAPGATL 120
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
GLPE+TLG++PG TQRLPRLVGL A+ ++ + I + E +GL+DA+ + + +
Sbjct: 121 GLPEVTLGIVPGAGGTQRLPRLVGLEAALSLIGEGRIINAHEAEDIGLMDAI--AADPVT 178
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 248
V+R + + +P T L + ++ AR QA K +P +D++
Sbjct: 179 VARTFPIP----DRPA------TGALPAPPPDPAGVEAARKQAGKRSPGQIAPLKAIDLV 228
Query: 249 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRAT--SKVPNVTDIGLKPRGVR 306
+ +G+ E + F L D + L HVFFA+RA TDIG
Sbjct: 229 DASTRQSLDAGLALERETFLTLKTSDQAAALRHVFFAERAAMAQGKGGGTDIG------- 281
Query: 307 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGL----VTRGKLT 362
V+GGG MG+GIA A I V L E ++ G+ ANV L V RGK T
Sbjct: 282 SAVVVGGGTMGAGIAYALAGLGIAVALVESDA----AGVGRARANVARLYADAVKRGKTT 337
Query: 363 QDKANNALKMLKGVLD-YSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 421
A + Y D+ IEAV E + +K+++F+ L+ A P ILATNTS
Sbjct: 338 AGAAEAEQATRFSFHEGYGALPPADLAIEAVFEDMGVKREVFTALDAALPESTILATNTS 397
Query: 422 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 481
+D+N + E +R +G HFFSPAHVM LLE++R TSA+ + + + +KK+P+
Sbjct: 398 YLDVNRIAEAVRRPERFLGLHFFSPAHVMKLLEVIRARTTSAETLATALRLAARLKKIPI 457
Query: 482 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAA 541
+ G C GF NR Y Q+ +++ G ++D A+R FG+ +GP+++ DL+G +A
Sbjct: 458 LAGVCDGFIGNRILTRYRQTCDIMLMEGALPAQVDRALRGFGMAMGPYEVQDLSGLDIAY 517
Query: 542 ATSKEFDKAFPDRSFQSPLVDLLL-KSGRNGKANGKGLYTYEKGSKPKPDPSVL---PII 597
A K D P+ D ++ ++GR G+ G G Y Y+ G K PS L ++
Sbjct: 518 ANRKRLGWRTKDGFRYIPIADRVVEETGRLGRKTGAGWYDYDGG---KASPSTLIDRIVV 574
Query: 598 EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSF 657
EE R G + +++EIV + +V E R+LEEGI RA+D+D + G +F
Sbjct: 575 EEAVR-----AGIARRAFSDEEIVARAISSMVEEGFRILEEGIAARAADIDLVMIHGYAF 629
Query: 658 PSYRGGIVFWADAVGANYVYTSLKKWS 684
P +RGG + A VG + + ++ ++
Sbjct: 630 PRWRGGPMHHAGRVGLSEIVRRIEAFA 656
>gi|222157091|ref|YP_002557230.1| Fatty acid oxidation complex subunit alpha [Escherichia coli LF82]
gi|387617698|ref|YP_006120720.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O83:H1 str. NRG 857C]
gi|222034096|emb|CAP76837.1| Fatty acid oxidation complex subunit alpha [Escherichia coli LF82]
gi|312946959|gb|ADR27786.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O83:H1 str. NRG 857C]
Length = 714
Score = 338 bits (867), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 230/715 (32%), Positives = 365/715 (51%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + ++ +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEVLARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQAVKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L ++FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASTDVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPRGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCATHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G + ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHIDTALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIMPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ +I + RLS ++ E + ++NE+ R L+E ++ D D
Sbjct: 600 AIYLLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCLDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E + +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCDRLVEMSERG 702
>gi|410645454|ref|ZP_11355917.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola agarilytica NO2]
gi|410134965|dbj|GAC04316.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola agarilytica NO2]
Length = 716
Score = 338 bits (867), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 244/713 (34%), Positives = 370/713 (51%), Gaps = 38/713 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPI---VAGLKDKFEEATSRDDVKAIVLTGNGGRF 61
T+ +DG+AI+++ P +N L + V + D+ E +S V +V++G F
Sbjct: 16 TLTKRDDGIAILSMDVPGETMNTLKVEFGDQVGAMLDQIESDSSIKGV--VVISGKDNSF 73
Query: 62 SGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCH 121
G DI++ A + + + V IED P VAA+ G ALGGGLELA+ CH
Sbjct: 74 VAGADISMLAGCKSAEEAQAIGQGG-QAVFQRIEDMSVPFVAAIHGPALGGGLELALACH 132
Query: 122 ARIAAP--KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGL 176
R+ + KTQLGLPE+ LG++PG TQRLPRL+ + +A++MML ++ +++ K G+
Sbjct: 133 MRVCSDDDKTQLGLPEVQLGLLPGSGGTQRLPRLISVQQAMKMMLTGSAVRAKQAKKYGI 192
Query: 177 IDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEA-----REVLKLARLQA 231
+D +V LL V A+++A + KP R + D +G E + + K AR Q
Sbjct: 193 VDDMVPRSILLDV----AIEMAKKSKPK-RKPVKLDLMGQFLERTPMGRKLMFKQARKQT 247
Query: 232 K-KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATS 290
+ KT N P + +D IE G+ G G EA+ F LVM S L +FFA
Sbjct: 248 QAKTLGNYPSPERIIDCIETGLEKGNAQGYALEAQHFGHLVMTPESAALRSLFFATTEMK 307
Query: 291 KVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIE 349
K V G+ P ++K+ V+GGGLMG GIA + V +K++ S+ + +K
Sbjct: 308 KENGVE--GVAPNALKKIGVLGGGLMGGGIAFVTATKAKLPVRIKDIRSDGIAHAMKYSY 365
Query: 350 ANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKA 409
+ V R + + + L L G +DY F + D+VIEAV E + LKQ + +++E
Sbjct: 366 DILSKKVKRRFMLHSQMQSQLSRLTGSVDYVGFDNTDVVIEAVFEDLALKQNMVADVETH 425
Query: 410 CPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDL 469
C H I A+NTS+I + + + +IG H+FSP MPL E++ E TS Q I
Sbjct: 426 CSEHTIFASNTSSIPIGQIAANAKRPENVIGLHYFSPVDKMPLAEVIAHEGTSDQTISTT 485
Query: 470 MTVGKIIKKVPVVVGNCTGFAVNRAFFPY-SQSARLLVSLGVDVFRIDSAIRSFGLPIGP 528
+ + K K P+VV + GF VNR PY ++SA +L++ G + +ID A+ FG P+GP
Sbjct: 486 VELAKKQGKTPIVVKDGAGFYVNRILAPYMNESAEILLA-GEPIEQIDRALVKFGFPVGP 544
Query: 529 FQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK 588
+LLD G V S F +R +P D LL R GK N +G Y YE G KP
Sbjct: 545 IKLLDEVGIDVGTKISPILVAEFGERFSSAPGFDKLLADDRKGKKNKRGFYNYE-GKKPG 603
Query: 589 PDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLD 648
+ + E L I P + ++E I E + ++NE+ L+EG+V A D D
Sbjct: 604 KE-----VDESVYDLLGITPSSR---LSESTIAERCVLLMLNEAAMCLDEGVVRSARDGD 655
Query: 649 DASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERA 701
++ G+ FP + GG + D++G V L + Q +G+ F P++ L E A
Sbjct: 656 IGAIFGIGFPPFLGGPFRYMDSLGIQQVVERLSHYQQQFGDKFTPAKCLVEMA 708
>gi|300903733|ref|ZP_07121648.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
84-1]
gi|301304884|ref|ZP_07210988.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
124-1]
gi|415864075|ref|ZP_11537226.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
85-1]
gi|300404315|gb|EFJ87853.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
84-1]
gi|300839813|gb|EFK67573.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
124-1]
gi|315255280|gb|EFU35248.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
85-1]
Length = 714
Score = 338 bits (867), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 229/715 (32%), Positives = 363/715 (50%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPAIERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TS Q I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSVQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R ++E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCVDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>gi|419317643|ref|ZP_13859445.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC12A]
gi|378168336|gb|EHX29240.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC12A]
Length = 709
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 231/715 (32%), Positives = 364/715 (50%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 3 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 62
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 63 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 121
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 122 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 181
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 182 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 237
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 238 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 296
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 297 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 355
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ H I
Sbjct: 356 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNSAAHTIF 415
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 416 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 475
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 476 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 535
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 536 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 594
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R ++E ++ D D
Sbjct: 595 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCVDEQVIRSVRDGDI 642
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 643 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 697
>gi|218554896|ref|YP_002387809.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli IAI1]
gi|417131926|ref|ZP_11976711.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
5.0588]
gi|417146068|ref|ZP_11987026.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
1.2264]
gi|419807426|ref|ZP_14332482.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli AI27]
gi|419922993|ref|ZP_14440966.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli 541-15]
gi|432765725|ref|ZP_20000163.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE48]
gi|433092718|ref|ZP_20278985.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE138]
gi|254788657|sp|B7M6M2.1|FADJ_ECO8A RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|218361664|emb|CAQ99260.1| fused enoyl-CoA hydratase and epimerase and isomerase ;
3-hydroxyacyl-CoA dehydrogenase [Escherichia coli IAI1]
gi|384469567|gb|EIE53722.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli AI27]
gi|386149780|gb|EIH01069.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
5.0588]
gi|386163520|gb|EIH25315.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
1.2264]
gi|388394756|gb|EIL56012.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli 541-15]
gi|431309900|gb|ELF98093.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE48]
gi|431610048|gb|ELI79353.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE138]
Length = 714
Score = 338 bits (866), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 230/715 (32%), Positives = 364/715 (50%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNSAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R ++E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCVDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>gi|374371761|ref|ZP_09629692.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Cupriavidus basilensis OR16]
gi|373096705|gb|EHP37895.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Cupriavidus basilensis OR16]
Length = 602
Score = 338 bits (866), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 213/606 (35%), Positives = 313/606 (51%), Gaps = 16/606 (2%)
Query: 104 AVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMM 160
A+ G+ALGGG+ELA+GCH RIA+ LGLPE+ LG++PG TQRLPRL+G+ A+ ++
Sbjct: 3 AIHGVALGGGMELALGCHYRIASADASLGLPEVNLGLVPGGGGTQRLPRLIGVPAALALI 62
Query: 161 LLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEA 220
K ++ LG+ DA++ E L A R + H ++A
Sbjct: 63 QGGKPERGDKAVALGMADALIGGEPLAAAVAF------AERVAGLPGTHPVIARKPCADA 116
Query: 221 REVLKLARLQA-KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGL 279
V AR+ A A N +A + +E +G+ E F +LV S+ L
Sbjct: 117 AGVDFAARIAAVSAKARNALAQRAAIACVEAATRLPIDAGLDAERGHFDQLVAGTESKAL 176
Query: 280 VHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSE 339
H+FFA+R KV + G R V +V ++G G MG+GIA A I V L E
Sbjct: 177 RHLFFAEREAPKVAALP-AGASLRTVARVGILGAGTMGAGIAMAFANAGIQVTLLEQQQA 235
Query: 340 YLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLK 399
L +G+ I N +GKLT + + L + D D+VIEAV E + +K
Sbjct: 236 ALDRGLAMIRRNYEITAAKGKLTAQGIAQRMACITPTLAEAALADADLVIEAVFEDMAVK 295
Query: 400 QKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTE 459
+ +F+ L C P ILATNTS + ++++ TS +IG HFFSPA+VM LLE+V+ E
Sbjct: 296 EAVFARLGALCKPGAILATNTSRLSIDVIAASTSRPQDVIGLHFFSPANVMKLLEVVQGE 355
Query: 460 RTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAI 519
RT+ +V M + + I K+PV+V C GF NR PY + A L+ G ++D A+
Sbjct: 356 RTAPEVTATCMKMAQAIGKIPVLVRVCEGFVGNRMLTPYWREAGFLLEEGASPQQVDGAL 415
Query: 520 RSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLY 579
FG+ +GP + DLAG + AT K P S + D + + GR G+ G Y
Sbjct: 416 TRFGMAMGPLAMADLAGMDINWATRKRLAPTRPAHLRYSKVADRICEQGRFGQKTNAGYY 475
Query: 580 TYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 638
YE G + P PDP+V +I C + I + V+++EIVE + +VNE R+LEE
Sbjct: 476 RYEAGGRSPLPDPAVDALIRACAAEAGI----ERRDVSDEEIVERCMLALVNEGARILEE 531
Query: 639 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLE 698
GI RASD+D V G FP++RGG +F A+ +G ++ ++G + P+ L
Sbjct: 532 GIAQRASDIDVVYVHGYGFPAWRGGPMFHAETIGLGCTLDKIRALHAIHGEHWAPAPLLV 591
Query: 699 ERATKG 704
+G
Sbjct: 592 RLVAQG 597
>gi|419278869|ref|ZP_13821115.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC10E]
gi|419376283|ref|ZP_13917307.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC14B]
gi|419381621|ref|ZP_13922571.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC14C]
gi|378127570|gb|EHW88958.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC10E]
gi|378219006|gb|EHX79275.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC14B]
gi|378227264|gb|EHX87436.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC14C]
Length = 714
Score = 338 bits (866), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 231/715 (32%), Positives = 364/715 (50%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPAIERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNSAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R ++E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCVDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>gi|328717308|ref|XP_001949325.2| PREDICTED: trifunctional enzyme subunit alpha, mitochondrial-like
[Acyrthosiphon pisum]
Length = 760
Score = 338 bits (866), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 238/721 (33%), Positives = 374/721 (51%), Gaps = 44/721 (6%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVK-AIVLTGNGGRFSGGFDINV 69
D + +ITL P VN+L+ ++ L+ +A+ +K +++++G F G DI++
Sbjct: 42 DDILVITLNTPNSKVNSLSHDVMDELQTNLNKASQDPSIKGSVIISGKPNCFIAGADISM 101
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA--AP 127
Q A +V + + ++N +E KP+VAA+ G LGGGLE+AM CH RIA +
Sbjct: 102 LQACRTAEEVHKISH-DGQNILNQVEKSTKPVVAAIMGSCLGGGLEVAMACHYRIAVKSK 160
Query: 128 KTQLGLPEL---TLGVIPGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT-- 182
T LGLPE+ L GTQRLP+LV + ++M L KS +++ K+GLID +VT
Sbjct: 161 NTALGLPEVMLGLLPGGGGTQRLPKLVAMPTVLDMALTGKSYRADKALKVGLIDQLVTPL 220
Query: 183 -------SEELLKVSRLWALD----IAARRKPWIRSLHRT--DKLGSLSEAREVLKLARL 229
+E L+ A+D +AA K R+ ++T DK+ L+ +E L+
Sbjct: 221 GPGLSTPTERTLEYLEEIAIDAAKKLAAGHKLTKRNKNKTLIDKVIDLALQQEWLREKFF 280
Query: 230 QAKK------TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVF 283
+ K T P +DVI+ GI HG G E+ F EL M S+GL+ +F
Sbjct: 281 DSAKGKVLKMTGGLYPAPLKIIDVIKTGIAHGTTKGYAAESNGFAELAMTPQSKGLIGLF 340
Query: 284 FAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLK 343
Q K G ++ V V+G GLMG+GIA + + V+LK+ N E L K
Sbjct: 341 QGQTECKK----NKFGEPKVALKTVGVLGAGLMGAGIAHVTVDKGLQVILKDTNKEGLAK 396
Query: 344 GIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIF 403
GI IE + G V R KLT + + + L L Y F D+VIEAV E++ +K ++
Sbjct: 397 GIAQIEKGLTGAVKRKKLTAIEKDRYVSDLTSTLSYESFSKADIVIEAVFENIKIKHQVI 456
Query: 404 SELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSA 463
ELE+ P HCI+ATNTS I + + E +S + +IG H+FSP M LLEI+ T++TS
Sbjct: 457 KELEQVVPKHCIIATNTSAIPIGKISEGSSRPENVIGMHYFSPVDKMQLLEIITTDKTSK 516
Query: 464 QVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFG 523
+ +++G K+ +VV + GF R A L+ GV+ ++D+ +SFG
Sbjct: 517 ETAAAAVSLGLKQGKIVIVVKDGPGFYTTRILSTMLSEAMRLLQEGVNPKQLDTITKSFG 576
Query: 524 LPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDL--LLKSGRNGKANGKGLYTY 581
P+G L D G V + + K F +R L L ++ SG G+ +GKG + Y
Sbjct: 577 FPVGAATLSDEVGIDVGYHIATDLAKVFGERFSGGDLNVLKSMVDSGFLGRKSGKGYFVY 636
Query: 582 EKGSKPKPDPS-VLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGI 640
+ G+K +P+ + + ++E + + P G+ SV +++ + F VNE+ LEE I
Sbjct: 637 KAGTKSRPENTEAISLLENFK----LQPIGEQ-SVENQQLRMVSRF--VNEAVLCLEESI 689
Query: 641 VVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEER 700
+ ++ D +V G+ FP + GG W D GA+ + + ++ + YG FKP + L +
Sbjct: 690 LNSPTEGDIGAVFGLGFPPFSGGPFRWVDWYGADKLVSKMQTFQNDYGLPFKPCQLLLDH 749
Query: 701 A 701
A
Sbjct: 750 A 750
>gi|419175972|ref|ZP_13719788.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC7B]
gi|378031944|gb|EHV94526.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC7B]
Length = 714
Score = 337 bits (865), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 229/715 (32%), Positives = 363/715 (50%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I ++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIQVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R ++E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCVDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>gi|254506914|ref|ZP_05119053.1| fatty oxidation complex, alpha subunit FadJ [Vibrio
parahaemolyticus 16]
gi|219550199|gb|EED27185.1| fatty oxidation complex, alpha subunit FadJ [Vibrio
parahaemolyticus 16]
Length = 707
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 215/650 (33%), Positives = 347/650 (53%), Gaps = 25/650 (3%)
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
F G D+ + A + + + ++ +L D P+VAA+ G LGGGLELA+ C
Sbjct: 66 FVAGADVRMLDACTTAAEAQALAEKGQQMFQHL-SDLPYPVVAAIHGPCLGGGLELALAC 124
Query: 121 HARIA--APKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLG 175
R+ + KT+LGLPE+ LG++PG TQRLPRL+GL +++++L K + +++ KLG
Sbjct: 125 DYRVCTDSDKTRLGLPEVQLGLLPGSGGTQRLPRLIGLLPSLDLILTGKQLRAKKAKKLG 184
Query: 176 LIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVL--KLARLQAKK 233
++DAVV LL V++ + A + K + + + + R+V+ + A+ +K
Sbjct: 185 VVDAVVPETILLDVAKSFVEKNAGKSKGKRKVSTKEKLISNTGLGRKVIFDQAAKKTFEK 244
Query: 234 TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 293
T N P A L+VI G+ G G KEA+ F ELVM S+ L +FFA K
Sbjct: 245 TRGNYPAADAILEVIRYGLEKGFEQGQKKEAERFAELVMTSESKALRSIFFATTEMKK-E 303
Query: 294 NVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEANV 352
N +D +P V++ AV+GGGLMG+GI+ + + V +K+V+ + +L +K
Sbjct: 304 NGSDA--EPLSVKRAAVLGGGLMGAGISHVSVAKAKVPVRIKDVSEDGVLNALKYNYKLF 361
Query: 353 RGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPP 412
R +++ + + + L G D++ F D+VIEAV E + LKQK+ +++E+
Sbjct: 362 ETQRKRRIISKAQLQSKMLQLSGGTDFTSFNHTDIVIEAVFEDLDLKQKMVADIEENAKD 421
Query: 413 HCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTV 472
I ATNTS++ + + EK + ++G H+FSP MPL+E++ E TS + + ++
Sbjct: 422 STIFATNTSSLPIGQIAEKAQRPENVVGLHYFSPVEKMPLVEVIPHEGTSDETVSTVVEF 481
Query: 473 GKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLL 532
+ K P+VV +C GF VNR PY A ++ G + +D A+ +FG P+GP LL
Sbjct: 482 ARKQGKTPIVVKDCAGFYVNRILAPYMNEAAQVLMSGEPIGHLDKALLNFGFPVGPITLL 541
Query: 533 DLAGYGVAAATSKEFDKAFPDRSFQSPLV-DLLLKSGRNGKANGKGLYTYEKGSKPKPDP 591
D G + A +R F+ P V D LL GR G+ +GKG YTY KG K + D
Sbjct: 542 DEVGVDIGAKIMPILVNELGER-FKGPDVFDTLLNDGRKGRKSGKGFYTY-KGKKKEVDK 599
Query: 592 SVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDAS 651
SV +L + P K + ++E+ + P++NE+ R L+EGI+ D D +
Sbjct: 600 SVY-------KLLGLSPESK---MAQEEMAMRCVLPMLNEAVRCLDEGIIRSPRDGDIGA 649
Query: 652 VLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERA 701
+ G+ FP + GG + D +G + + + ++ YG+ F P L RA
Sbjct: 650 IFGIGFPPFLGGPFRYMDQIGVKKLVEIMNQHAEKYGDRFAPCDGLLTRA 699
>gi|262043383|ref|ZP_06016509.1| fatty oxidation complex [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259039264|gb|EEW40409.1| fatty oxidation complex [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 714
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 233/713 (32%), Positives = 370/713 (51%), Gaps = 34/713 (4%)
Query: 8 MEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGG 64
+EV D +A+IT+ P +N L + ++ + V+ +V ++ F G
Sbjct: 9 LEVRADKIAVITIDAPGEKMNTLKAEFGSQVRGLIRQLRDDKSVRGVVFISAKADNFIAG 68
Query: 65 FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
DIN+ + A + + +++ I P++AA+ G LGGGLELA+ CH RI
Sbjct: 69 ADINMIARCRSAQEAEALARQGQQIMAE-IHGLSIPVIAAIHGACLGGGLELALACHGRI 127
Query: 125 AA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDA 179
+ KT+LGLPE+ LG++PG TQRLPRL+G+S A++MML K + + K GL+D
Sbjct: 128 CSDDEKTRLGLPEVQLGLLPGSGGTQRLPRLIGVSTALDMMLTGKQLRPRQALKAGLVDE 187
Query: 180 VVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLK--LARLQAKKTAPN 237
VV LL+ A+++A + +P R + +++ + R +L + + +KT N
Sbjct: 188 VVPQAILLQA----AVELALKGRPTSREVPVRERVLAGPLGRHLLFQFVGKQTQRKTQGN 243
Query: 238 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 297
P + L V+E G+ HG SG +EA+ F EL M S+ L +FFA K P +
Sbjct: 244 YPAVKRILQVVENGLAHGCSSGYAEEARAFGELAMSPQSQALRSIFFASTDLKKDPG-AE 302
Query: 298 IGLKPRGVRKVAVIGGGLMGSGIATAHILNN-IYVVLKEVNSEYLLKGIKTIEANVRGLV 356
G P +R VAV+GGGLMG GIA + V +K++ + +K + V
Sbjct: 303 AGPGP--LRSVAVLGGGLMGGGIAYVTACKGGLPVRIKDIQPRGINHALKYSWDLLNKQV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
+ +L + + + ++ G DY F D+VIEAV E + LKQ++ SE+E+ P I
Sbjct: 361 RQRRLRPVERDRQMALISGTTDYQGFAHRDVVIEAVFEDLALKQRMVSEVEQYGGPQTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + S ++IG HFFSP MPL+E++ + T Q I ++ + K
Sbjct: 421 ASNTSSLPIGDIAAHASRPGQVIGLHFFSPVEKMPLVEVIPHKGTDPQTIATVVQLAKRQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K+P+VV + GF VNR PY A L+ G + ID+A+ FG P+GP QLLD G
Sbjct: 481 GKMPIVVADKAGFYVNRILAPYINEAMRLLVEGEPIEVIDNALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTYE---KGSKPKPDP 591
+ AF +R F P ++D +LK R G+ N +G Y YE + SK +PDP
Sbjct: 541 IDTGTKIIPVLEGAFGER-FSPPANIIDAILKDDRKGRKNNRGFYLYETKGRKSKKRPDP 599
Query: 592 SVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDAS 651
+V P++ R S + + +++ E + ++NE+ R +E I+ A D D +
Sbjct: 600 AVYPLLGIGRPQSRL---------SAQQVAERCVMMMLNEAARCFDEQIIRSARDGDIGA 650
Query: 652 VLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
V G+ FP + GG + + +GA V L++ + +G F P L A +G
Sbjct: 651 VFGIGFPPFLGGPFRYMNTIGAGEVAAILQRLAAQFGPRFTPCDTLLRMAEQG 703
>gi|410628499|ref|ZP_11339218.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola mesophila KMM 241]
gi|410151975|dbj|GAC25987.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola mesophila KMM 241]
Length = 717
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 242/717 (33%), Positives = 367/717 (51%), Gaps = 34/717 (4%)
Query: 1 MAAPRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGN 57
+A T+ +DG+AI+++ P +N L + + D ++ S +K +V ++G
Sbjct: 10 LAPSAFTLTKRDDGIAILSMDVPGETMNTLKVEFGEQIGDMLDQIQSDSAIKGVVVISGK 69
Query: 58 GGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELA 117
F G DI++ A + + + V IED P VAA+ G ALGGGLELA
Sbjct: 70 DNSFVAGADISMLAGCKSAEEAEAIGKGG-QAVFQRIEDMTVPFVAAIHGPALGGGLELA 128
Query: 118 MGCHARIAAP--KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGW 172
+ CH R+ + KTQLGLPE+ LG++PG TQRLPRL+ + +A++MML S+ +++
Sbjct: 129 LACHMRVCSDDNKTQLGLPEVQLGLLPGSGGTQRLPRLISVQQAMKMMLTGASVRAKQAQ 188
Query: 173 KLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREV-----LKLA 227
K G++D +V LL+V+ A + RKP + D +G E V K A
Sbjct: 189 KYGIVDDMVPRSILLEVAIEMAKNPKPNRKPV-----KLDAMGQFLERTPVGRKLMFKQA 243
Query: 228 RLQAK-KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQ 286
R Q + KT N P + +D IE G+ G G EAK F LVM S L +FFA
Sbjct: 244 RKQTEAKTMGNYPSPERIIDCIETGLEKGKAQGFAVEAKHFGHLVMTPESAALRSLFFAT 303
Query: 287 RATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGI 345
K V G+ P+ ++K+ V+GGGLMG GIA + +K++ S+ + +
Sbjct: 304 TEMKKENGVE--GVAPKTLKKIGVLGGGLMGGGIAFVTATKAKLPARIKDIRSDGIAHAM 361
Query: 346 KTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSE 405
K + V R + + + L L G +DY F + D+VIEAV E + LKQ + ++
Sbjct: 362 KYSYDILNKKVKRKFMLHSEMQSQLSRLTGSVDYVGFDNTDVVIEAVFEDLALKQNMVAD 421
Query: 406 LEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQV 465
+E+ C H I A+NTS+I + + K + +IG H+FSP MPL E++ E TS Q
Sbjct: 422 VEEHCSEHTIFASNTSSIPIGQIAAKAKRPENVIGLHYFSPVDKMPLAEVIAHEATSDQT 481
Query: 466 ILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPY-SQSARLLVSLGVDVFRIDSAIRSFGL 524
I + + K K P+VV + GF VNR PY ++SA +L++ G + +ID A+ FG
Sbjct: 482 ISTTVELAKKQGKTPIVVKDGAGFYVNRILAPYMNESAEILLA-GEPIEQIDKALVKFGF 540
Query: 525 PIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKG 584
P+GP +LLD G V F +R +P D LL R GK N +G Y YE G
Sbjct: 541 PVGPIKLLDEVGIDVGTKIGPILVAEFGERFESAPGFDKLLADDRKGKKNKRGFYNYE-G 599
Query: 585 SKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRA 644
KP + + E L I P + ++E I E + ++NE+ L+EG+V
Sbjct: 600 KKPGKE-----VDESVYDLLGITPNSR---LSENTIAERCVLLMLNEAAICLDEGVVRNP 651
Query: 645 SDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERA 701
D D ++ G+ FP + GG + D +G +V L + Q G+ F P++ L + A
Sbjct: 652 RDGDIGAIFGIGFPPFLGGPFRYMDTLGIEHVVERLTHYKQQLGDKFAPAKRLLDMA 708
>gi|311109839|ref|YP_003982690.1| fatty acid oxidation complex subunit alpha 3 [Achromobacter
xylosoxidans A8]
gi|310764528|gb|ADP19975.1| fatty acid oxidation complex subunit alpha 3 [Achromobacter
xylosoxidans A8]
Length = 669
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 232/656 (35%), Positives = 350/656 (53%), Gaps = 34/656 (5%)
Query: 22 NPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSL 81
NPPVNA + + L + ++ + + A VL G+G F G DI F + VS
Sbjct: 5 NPPVNATSYAVRIALVEGIKKLDTDPTLVAGVLAGSGKTFVAGADIREF-----SDSVSR 59
Query: 82 MPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVI 141
P + LV++ + C KP+VAA+ G ALGGGLELA+GC ARIA +GLPE+TLG++
Sbjct: 60 QPMLG--LVIDDLMACSKPVVAAIHGFALGGGLELALGCDARIAKRGAIVGLPEVTLGIL 117
Query: 142 P---GTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIA 198
P GTQRLPR VGL +A++++ + T+E + GL+D VV + LL+
Sbjct: 118 PAAGGTQRLPRCVGLGRAMQLICSGERYTAERALQWGLVDEVV-EDGLLE---------- 166
Query: 199 ARRKPWIRSLHRTDK----LGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVH 254
R RS+ T + L +E ++ A Q + + P ++ I+
Sbjct: 167 -RAIAKARSMQGTKRDLLDLPMPAEEPSAIEAAERQVLRAGKHRPAVVTAIESIKNAARL 225
Query: 255 GGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGG 314
G+ E + F+EL + + GL H FFA+R + KVP + G+ PR V+ VAVIG G
Sbjct: 226 PKQDGLQAERRYFQELRLTPDAFGLRHQFFAERESLKVPALA--GVAPRPVQTVAVIGAG 283
Query: 315 LMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLK 374
MG+GIA + + + V+L E + L +G + I+A+ V GK Q +A+ +L L
Sbjct: 284 TMGTGIAISALQAKLDVILLERDEAALQRGHERIQAHYAQRVAAGKTDQAQADQSLARLS 343
Query: 375 GVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSS 434
+D+++ D+VIEAV E + +KQ++F +++ P +LATNTS +D++ + + TS
Sbjct: 344 ATVDWTQVARADLVIEAVFEQLEVKQEVFRIIDRHARPGAVLATNTSYLDVDKIAQATSR 403
Query: 435 QDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRA 494
++G HFFSPA+VM LLE+VR ++ V+ M +GK + K PV+ GN GF NR
Sbjct: 404 PQDVLGLHFFSPANVMKLLEVVRGAHSAPDVLATGMALGKRLGKSPVLCGNAFGFVGNRI 463
Query: 495 FFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR 554
+ Y Q L++ G +D A+ FG +GPF + DLAG + A K R
Sbjct: 464 YNVYRQQCELMLEDGAWPETVDQALEQFGFAMGPFSVGDLAGLDIPWAMRKSQAATRDSR 523
Query: 555 SFQSPLVDLLLKSGRNGKANGKGLYTY--EKGSKPKPDPSVLPIIEECRRLSNIMPGGKP 612
++D L + GR G+ G G Y + +K + D +V IIE+ R I +
Sbjct: 524 VRYVDILDKLCELGRYGRKTGAGYYQHTGDKTAGRTSDAAVRAIIEDASRRRGI----ER 579
Query: 613 ISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWA 668
+ +EI + +VNE+ V+ EGI RASD+D VLG FP + GG V WA
Sbjct: 580 RELGAEEIQRRAMLALVNEAAWVMHEGIATRASDIDVVLVLGYGFPRWLGGPVHWA 635
>gi|425289358|ref|ZP_18680205.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli 3006]
gi|408213594|gb|EKI38078.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli 3006]
Length = 714
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 229/715 (32%), Positives = 363/715 (50%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++ + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELVKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DALPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R ++E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCVDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>gi|294010197|ref|YP_003543657.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingobium japonicum UT26S]
gi|292673527|dbj|BAI95045.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingobium japonicum UT26S]
Length = 654
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 241/674 (35%), Positives = 352/674 (52%), Gaps = 48/674 (7%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+G+ + PPVNAL + L D EA + V+A+V+ G F G DI F
Sbjct: 13 REGIGECVVDAPPVNALGRDVRQALLDAVAEAAADPVVEALVIRCAGRTFFAGADIREF- 71
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
G L P S+ VV IE+ KP++AA+ G ALGGGLE+A+G H RIA +
Sbjct: 72 -----GKPPLPP--SLPEVVAAIEESAKPVIAAIHGTALGGGLEVALGAHRRIAVSSARF 124
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
GLPE+ LG++PG TQRL RLVG+ KA+ M++ I++EE + GL+D V L++
Sbjct: 125 GLPEVKLGLLPGAGGTQRLSRLVGVGKALAMIVGGDPISAEEALEAGLLDRKVADGTLIE 184
Query: 189 VSRLWALDIAARRKPWIRS----LHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 244
+R +A + A P +R+ + D++ ++ + R + AP AC
Sbjct: 185 AARQFAREAAGEGAP-VRTRDLPVADPDRVDTVLDEYGNANPRRFGGQD-AP-----AAC 237
Query: 245 LDVIEEGIVHGGYSGVLK-EAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKP 302
++VI +G+ H + L E F L S L HVFFA+R SKV + D P
Sbjct: 238 VEVIRKGL-HVPFDEALALERAAFTRLRDGAQSAALRHVFFAEREVSKVAGIDADTPRLP 296
Query: 303 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTR---- 358
+ +V VIG G MG GIA A + + VVL E E L G+ A VR L+ R
Sbjct: 297 --IDRVGVIGAGTMGRGIAMALLTAGLPVVLVEQRREALDAGL----AGVRDLIARAVKG 350
Query: 359 GKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 418
G++ + A+ A L G L Y + +VD+VIEA E++ +KQ IF L P ILAT
Sbjct: 351 GRMDRASADAASARLTGSLSYDDLAEVDLVIEAAFETMEVKQVIFRALGGVAKPTAILAT 410
Query: 419 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKK 478
NTS +D++ + TS ++++G HFFSPA++M LLEIVR RTS QV+ + + K + K
Sbjct: 411 NTSYLDVDAIAACTSRPEQVLGLHFFSPANIMKLLEIVRGARTSPQVLATALDLAKRLGK 470
Query: 479 VPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYG 538
+ VV GN GF NR +A + G + ID + +FG+P+GPF++ DLAG
Sbjct: 471 IAVVAGNAHGFIGNRMLMARRLAAEAMALEGASPYAIDRVLVAFGMPMGPFRIGDLAGLD 530
Query: 539 VAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIE 598
+ P+ S S + + L + GR G+ G G Y Y+ + P P V II
Sbjct: 531 LGWT---------PETSTGSTIRERLNERGRRGQKVGAGFYDYDDEGRATPSPEVERIIA 581
Query: 599 ECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFP 658
E I +++ I+ +L P++ E R++ EGI RASD+D V G +P
Sbjct: 582 ELAADKAI----PQRDWSDEAILAGLLDPMIEEGRRIVAEGIAQRASDVDMVWVHGYGWP 637
Query: 659 SYRGGIVFWADAVG 672
+RGG +++AD G
Sbjct: 638 RWRGGPLYYADHRG 651
>gi|196008333|ref|XP_002114032.1| hypothetical protein TRIADDRAFT_58079 [Trichoplax adhaerens]
gi|190583051|gb|EDV23122.1| hypothetical protein TRIADDRAFT_58079 [Trichoplax adhaerens]
Length = 737
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 239/725 (32%), Positives = 374/725 (51%), Gaps = 43/725 (5%)
Query: 9 EVGNDGVAIITL--INPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNG-GRFSGGF 65
E+ +DGVAI+ + N N ++ ++ +K FEE VK+IVL + F G
Sbjct: 13 EINDDGVAILRMDCANSKYNLASLGLMTDIKQCFEELKENPQVKSIVLISSKVDNFISGA 72
Query: 66 DINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA 125
DIN F ++ + +V + V N IE+ KP++AA++G LGGG EL++ CH RIA
Sbjct: 73 DINTFLSINSEELTQMCRNV--QEVYNDIENMPKPVIAAIQGPCLGGGCELSLSCHYRIA 130
Query: 126 AP--KTQLGLPELTLGVIP---GTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAV 180
+ KT +GLPE+ LGV+P GTQRLPRL+ L A++++L K + +++ KLG++DA+
Sbjct: 131 STLDKTAIGLPEVQLGVLPAAGGTQRLPRLINLPNALDLLLTGKQLKAKQAKKLGVVDAL 190
Query: 181 V-------------TSEELLKVSRLWALDIAA------RRKPWIRSLHRTDKLGSLSEAR 221
V T + L K + A +IA R PW T L + +
Sbjct: 191 VEKIGDGVVNSAQGTLDLLEKAAVEAAKNIANGTLKINREHPWTSMKGLTYNLTTFNPYV 250
Query: 222 EVLKLARLQA---KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 278
L R + KKT P LDV++ G+ G G+L+EA F E+ +
Sbjct: 251 RNFVLNRARQTVMKKTKGLYPSPLRILDVVKTGLEKGKEEGMLQEAINFGEIGKGSVAES 310
Query: 279 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 338
L+ +FF Q + P IG R V+KVAV+G GLMGSGIA + VV+K+ +
Sbjct: 311 LIGLFFGQTKCKRNP----IGEPSREVKKVAVLGAGLMGSGIAQVSVARGYDVVMKDNAA 366
Query: 339 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 398
L G + + G + ++T + N L L G LDYS+F D D+VIEAV+E + +
Sbjct: 367 AALASGQHAVYKAINGRAKKRRITNFEKNLILSRLTGQLDYSKFNDADIVIEAVLEDLDV 426
Query: 399 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 458
K ++ E+E+ P HC++A+NTS+I + + + + +++G H+FSP MPLLEI+ T
Sbjct: 427 KHQVIREVEEVVPEHCVIASNTSSIPIADIAKGSKRPSQVVGMHYFSPVDKMPLLEIIET 486
Query: 459 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 518
+TS + + ++VG KV +VV + GF R + +++ GVD DSA
Sbjct: 487 PQTSKEALAAAVSVGLKQGKVVIVVKDGLGFYTTRCLMALMAESLIILLEGVDPKGFDSA 546
Query: 519 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDL--LLKSGRNGKANGK 576
++ FG P+G LLD G VAA S F R + L L+ +G G+ +G+
Sbjct: 547 VQKFGFPVGFATLLDEVGIDVAAHISDVVGSKFGARIDARDMTVLKELVSNGIKGRKSGQ 606
Query: 577 GLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVL 636
G+Y Y G K + + +E +R + G S +EI+ + +VNE+ L
Sbjct: 607 GIYMYGSGKSKKKEINK-EAMEIIKRYTVSAKG----SHDNEEIISRVFTKLVNEAAFSL 661
Query: 637 EEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRF 696
+EGI+ D D V G+ FP + GG + DA+G + ++K +++G F+ +
Sbjct: 662 QEGIIRDPVDGDIGFVFGIGFPPHLGGPFRYLDAIGVDKFVNQMEKLREIHGERFEIAPM 721
Query: 697 LEERA 701
L + A
Sbjct: 722 LYDYA 726
>gi|42523321|ref|NP_968701.1| fatty oxidation complex, alpha subunit [Bdellovibrio bacteriovorus
HD100]
gi|39575527|emb|CAE79694.1| fatty oxidation complex, alpha subunit [Bdellovibrio bacteriovorus
HD100]
Length = 717
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 225/691 (32%), Positives = 360/691 (52%), Gaps = 29/691 (4%)
Query: 11 GNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR-FSGGFDINV 69
G V L+ VN + P++ LK+ EE + KA++ N + F G DI
Sbjct: 13 GEVAVVEFDLVGEKVNKFSTPVMMRLKEVVEE-LKKSSYKAVIFKSNKPKIFIAGADIEE 71
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA--P 127
+ + A + E V++++ED P +AAV G +GGG E + C RIA+
Sbjct: 72 IKSMTKAEEFEAAVKGGQE-VISMVEDLPMPTIAAVNGACMGGGCEFILACDYRIASEDS 130
Query: 128 KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 184
T++GLPE+ LG++PG R+PR++GL A++++L KS+ S++ K+GL+D VV
Sbjct: 131 STKIGLPEIQLGILPGFGGCIRMPRVIGLQAALDIILAGKSVNSKKALKIGLVDKVVHPN 190
Query: 185 ELLKVSRLWALDIAA-----RRKPWIRSLHRTDKLGSLSEAREVLKLARLQA-KKTAPNM 238
L S WA +I A RRK + L S V K AR K T +
Sbjct: 191 LLESFSLKWAKEIIADGAKKRRKTFKPQGAVNVILESALGRSIVFKKAREGVLKATKGHY 250
Query: 239 PQHQACLDVIEEGIVHGGYSGVLK-EAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 297
P L+VI++ L+ E + F +L + D S+ L+HVF+ K V
Sbjct: 251 PAPLQALEVIQKTYGMSDRDAALRIEREGFCKLGVTDISKNLIHVFYLTEMVKKQNGVPG 310
Query: 298 IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 357
+ +KPR V+ + V+G G MG GIA I V +K++N++ L KG+K LV
Sbjct: 311 VDVKPRDVKGLGVLGAGTMGGGIAYVAADKGIQVRMKDLNTDALGKGLKHASDLWMKLVK 370
Query: 358 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 417
R + + + + ++ DY+ FK++D+V+EA++E + +KQK+ E P I+A
Sbjct: 371 RKSIDKYQFQQKMDLVSVSTDYAGFKNLDVVVEAIVEDMGIKQKVIGECAGQMRPDAIIA 430
Query: 418 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 477
TNTS++ + + + + G HFF+P + MPL+E++R E+TS + I + + K +
Sbjct: 431 TNTSSLSVTEMAKGHPRPEYFAGMHFFNPVNKMPLIEVIRGEKTSDETIATIYELSKKMG 490
Query: 478 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA-IRSFGLPIGPFQLLDLAG 536
K+PVVV + GF VNR PY A L+ G+ + +D ++ FG+P+GPF+L+D G
Sbjct: 491 KMPVVVKDGPGFLVNRLLLPYMGEAAFLLQEGMSIEFVDKVYVKEFGMPMGPFELMDEVG 550
Query: 537 YGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTY-EKGSKPKPDPSVLP 595
V K F KAF +R +P ++ L SGR G+ NGKG YTY E G + D +V
Sbjct: 551 LDVCLKVLKIFKKAFGERIELAPCMEALGNSGRLGRKNGKGFYTYSEDGKRGAVDQTVYA 610
Query: 596 IIEECRRLSNIMPGGKPIS-VTEKEIVEMILFPVVNE-SCRVLEEGIVVRASDLDDASVL 653
+ G+P + KE +E +F ++NE S ++E+ IV ++D A ++
Sbjct: 611 ALGL----------GQPTNPYDSKECIERGVFAMINECSLALVEDRIVETPHEVDLAMIM 660
Query: 654 GMSFPSYRGGIVFWADAVGANYVYTSLKKWS 684
G FP +RGG++ + D++G YV L ++
Sbjct: 661 GTGFPPFRGGLMKYTDSIGTQYVADQLAMYA 691
>gi|397659223|ref|YP_006499925.1| enoyl-CoA hydratase [Klebsiella oxytoca E718]
gi|394347427|gb|AFN33548.1| Enoyl-CoA hydratase [Klebsiella oxytoca E718]
Length = 714
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 227/716 (31%), Positives = 359/716 (50%), Gaps = 38/716 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVK-AIVLTGNGGRFSG 63
T+EV D +A+IT+ P +N L + ++ + +++ A+ ++ F
Sbjct: 8 TLEVRPDNIAVITIDAPGEKMNTLKAEFASEVRGIIRQIRDNKELRGAVFISAKADNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ + H A + + +++ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIARCHSAQEAEALARQGQQIMAE-IHGLSIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAAP--KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ + KT+LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + + K GL+D
Sbjct: 127 VCSDDDKTRLGLPEVQLGLLPGSGGTQRLPRLIGVSGALEMILTGKQLRPRQALKAGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R++ +++ G L + +A+ KT
Sbjct: 187 EVVPQTILLQT----AIELALKGRPASRAVPARERILAGPLGRSLLFRLVAKKTHHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L VIE G+ G SG +EA+ F EL M S+ L +FFA K
Sbjct: 243 NYPATERILQVIETGLAQGCSSGYAEEARAFGELAMTPQSQALRSIFFASTDLKK----- 297
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHIL---NNIYVVLKEVNSEYLLKGIKTIEANVR 353
D G V +V G G A++ + V +K++ + +K +
Sbjct: 298 DRGADAEPVALRSVGILGGGLMGGGIAYVTACKGGLPVRIKDIQPRGINHALKYSWDLLD 357
Query: 354 GLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPH 413
V R L + + + ++ G LDY F D+VIEAV E++ LKQK+ SE+E+ C P
Sbjct: 358 KQVRRRYLRASERDRQMGLISGSLDYQGFAHRDVVIEAVFENLTLKQKMVSEVEQHCRPE 417
Query: 414 CILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVG 473
I A+NTS++ + + S R+IG HFFSP MPL+E++ T Q I + +
Sbjct: 418 TIFASNTSSLPIGEIAAHASRPQRVIGLHFFSPVDKMPLVEVIPHSGTDRQTIATAVKLA 477
Query: 474 KIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLD 533
K+ K P+VV + GF VNR PY A L+ G V ID+A+ FG P+GP QLLD
Sbjct: 478 KLQGKTPIVVADKAGFYVNRILAPYINEAMRLLMEGEPVEHIDNALVKFGFPVGPIQLLD 537
Query: 534 LAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTYE---KGSKPK 588
G + A+ +R F P ++ +L R G+ N +G Y Y + SK +
Sbjct: 538 EVGIDTGTKIIPVLEAAWGER-FSPPANIISSILNDDRKGRKNNRGFYLYAAKGRKSKKR 596
Query: 589 PDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLD 648
PDP++ + L P + ++ +++ E + ++NE+ R +E +V A D D
Sbjct: 597 PDPAIYAL------LGISSPQAR---LSAQQVAERCVMMMLNEAARCFDERVVRSARDGD 647
Query: 649 DASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D +GA V L++ + YG F P L A +G
Sbjct: 648 IGAVFGIGFPPFLGGPFRYMDTLGAGEVAAILQRLAAQYGPRFTPCDTLLHMAEQG 703
>gi|339017906|ref|ZP_08644052.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Acetobacter tropicalis
NBRC 101654]
gi|338753021|dbj|GAA07356.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Acetobacter tropicalis
NBRC 101654]
Length = 683
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 225/704 (31%), Positives = 370/704 (52%), Gaps = 27/704 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+D +A++T+ NPPVNAL+ + L E V A+VLTG G+F G DI
Sbjct: 4 HDKIAVVTIDNPPVNALSDTVRESLLHMLRELAEDPTVAAVVLTGQNGQFVAGADIREMS 63
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
+ +P+V V I+ KKPI+AA++G ALGGGLELA+ C R+ ++++
Sbjct: 64 RPPAQ---PFLPEV-----VAAIDAMKKPILAAIDGAALGGGLELALACDLRVGTERSRV 115
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
GLPE LGVIPG TQRLPRL G++ A+E++ +K I+ +E +L ++DA++ + +L
Sbjct: 116 GLPETKLGVIPGAGGTQRLPRLTGVATALEVIGSAKIISGKEALRLSILDALMPEDRML- 174
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 248
+ + AL A P R S ++ ++ K + L+ K A + + +
Sbjct: 175 -TDVIAL---AENTPKRRLSEHDVPCASKTDVQDAEK-STLKRAKGATAVLEAVRVVKAA 229
Query: 249 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 308
E + G S E + F L D ++ L ++F A+RAT ++ + +PR ++
Sbjct: 230 ETELFAQGLS---LEREAFLRLRESDEAKALRYLFLAERATGRL--LASEKAQPRHFSRI 284
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
VIGGG MG+GIA + VV+ E ++ + K I + + ++++++A
Sbjct: 285 GVIGGGTMGAGIAVTTADAALNVVIIERDAAAVAACQKRIASLYAKQIETKRISEEEAER 344
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
K ++ ++ K+VD VIEA ES+ +K+ IF L K H ++ATNTS +DL+ +
Sbjct: 345 RFKKIQISHEWDALKNVDFVIEAAFESMEVKENIFRSLNKVVQAHTVVATNTSYLDLDAI 404
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
+ ++G HFFSPAH+M L+E++R +T+ + + +G+ I+K+PVV G
Sbjct: 405 AGCAERPENVLGLHFFSPAHIMRLVEVIRGAKTTPDALATAIALGRKIQKLPVVATVGEG 464
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR F Y + A L+ GV ID A++S+G +GPF + DL+G +A A K
Sbjct: 465 FIGNRIFSHYRKHAEYLMEDGVSPQEIDQAMQSYGFAMGPFAVADLSGLDIAWAMRKRQS 524
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMP 608
A + D+ ++GR G+ GKG Y+Y S P+ D +IE R+ +
Sbjct: 525 AARNPNERYVKIPDMFCEAGRLGRKTGKGWYSYASAS-PELDDEACALIEAGRKQA---- 579
Query: 609 GGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWA 668
G + + ++ + I +L + NE +V+E G+ ASD+D V G FP +GG +F A
Sbjct: 580 GSRHVKLSAEAIQRRLLAVLANEGAKVMESGVASSASDIDIVFVNGYGFPRIQGGPMFAA 639
Query: 669 DAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSAPVS 712
D +G V ++ + + G +PS L + A G +A ++
Sbjct: 640 DKMGLPNVLREVEAAAAVGGAGSEPSALLIKLAQSGGSFTAGIT 683
>gi|56695641|ref|YP_165992.1| enoyl-CoA hydratase [Ruegeria pomeroyi DSS-3]
gi|56677378|gb|AAV94044.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
[Ruegeria pomeroyi DSS-3]
Length = 681
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 233/670 (34%), Positives = 351/670 (52%), Gaps = 35/670 (5%)
Query: 10 VGNDG-VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDIN 68
V DG +A + + +PPVNA + P+ AGL E + +LT G F G D+
Sbjct: 9 VRRDGDIAWVEIDSPPVNATSTPVRAGLARAVAEVQG---ARVAILTCAGRTFVAGGDMT 65
Query: 69 VFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPK 128
F + + +PDV V +IED + P VAA+ G LGGG E+A+ C RIAAP
Sbjct: 66 EFDR---PAEEPHLPDV-----VQMIEDSETPFVAAMHGTVLGGGFEIALACAWRIAAPG 117
Query: 129 TQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEE 185
T+ GLPE+ +G+IPG TQR PRL+G+ AI+M K + + + LG +D V +
Sbjct: 118 TKFGLPEVNVGLIPGAGGTQRAPRLIGMMAAIDMACSGKMLDAAQMLALGGLDQVAEGD- 176
Query: 186 LLKVSRLWALDIAARRKPWIRSLHRTDKLGS--LSEAREVLKLARLQAKKTAPNMPQHQA 243
L ++ +A + R P L + L S L+EA+ L A AK A P H
Sbjct: 177 LRAAAQGFAKGLPPR--PEKTRLRQVQALNSEALAEAKRALSKA---AKGRA--APLHN- 228
Query: 244 CLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPR 303
LD ++ + G +E + L D SR L + FFA+R ++ + G+ PR
Sbjct: 229 -LDALQWAALPFD-QGQPRERALHLGLRQSDESRALRYAFFAERLVARPDAIA--GVTPR 284
Query: 304 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQ 363
+ +VA++GGGLMG+G+A A + + V + E ++ + + V V RGK++
Sbjct: 285 ELTRVAIVGGGLMGAGVAMACLGGGLSVTVIERDAAAAQAAQERVAGLVAAGVKRGKISP 344
Query: 364 DKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI 423
D + L L Y++ D D+ IEAV E + +K+ +F++L P ILATNTS +
Sbjct: 345 DAQADMLARLATTDTYADASDADLAIEAVFEDLDVKRIVFADLAAVMRPDAILATNTSYL 404
Query: 424 DLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVV 483
D +V ++ R +G HFFSPAHVM LLEIV+T T+ +V+ +GK ++K+ V+
Sbjct: 405 DPQLVFAGIANPARCLGLHFFSPAHVMKLLEIVKTPDTAPEVLATGFALGKRLRKISVLS 464
Query: 484 GNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAAT 543
G C GF NR Y + A L++ G +D+A+R+ GLP+GPF+L DL G +A A
Sbjct: 465 GICDGFIGNRMLAAYRREAEYLLADGALPHEVDAAMRAQGLPMGPFELQDLTGLQIAWAN 524
Query: 544 SKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRR 602
K + D+L + R G+ +GKG Y Y +GS+ P+ DP V +I +
Sbjct: 525 RKRQAATRDPAERYERIADMLCEMDRLGQRSGKGWYRYAEGSRSPERDPEVETLIVDYSA 584
Query: 603 LSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRG 662
I +P S +EI + +L + NE R++ EGI RA D+D + G FP +RG
Sbjct: 585 KRGITR--RPFSA--EEIAQRLLAVLANEGARIVSEGIAERAEDVDMVQLHGYGFPRHRG 640
Query: 663 GIVFWADAVG 672
G + A + G
Sbjct: 641 GPMHLAQSQG 650
>gi|423115451|ref|ZP_17103142.1| fatty acid oxidation complex subunit alpha [Klebsiella oxytoca
10-5245]
gi|376381537|gb|EHS94274.1| fatty acid oxidation complex subunit alpha [Klebsiella oxytoca
10-5245]
Length = 715
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 229/719 (31%), Positives = 363/719 (50%), Gaps = 44/719 (6%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVK-AIVLTGNGGRFSG 63
T+EV D +A+IT+ P +N L + ++ + +++ A+ ++ F
Sbjct: 9 TLEVRPDNIAVITIDAPGEKMNTLKAEFASEVRGIIRQLRDNKELRGAVFISAKADNFIA 68
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ + H A + + +++ I P++AA+ G LGGGLELA+ CH R
Sbjct: 69 GADINMIARCHSAQEAEALARQGQQIMAE-IHGLTIPVIAAIHGACLGGGLELALACHGR 127
Query: 124 IAAP--KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ + KT+LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + + K GL+D
Sbjct: 128 VCSDDNKTRLGLPEVQLGLLPGSGGTQRLPRLIGVSSALEMILTGKQLRPRQALKAGLVD 187
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAP-- 236
VV LL+ A++ A + +P RS+ +++ + AR +L RL AKKT
Sbjct: 188 EVVPQTILLQT----AVERALKGRPASRSVPARERILAGPLARSLL--FRLVAKKTHHKT 241
Query: 237 --NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPN 294
N P + L VIE G+ G SG +EA+ F EL M S+ L +FFA K
Sbjct: 242 QGNYPATERILQVIETGLAQGCSSGYAEEARAFGELAMTPQSQALRSIFFASTDLKK--- 298
Query: 295 VTDIGLKPRGVRKVAVIGGGLMGSGIATAHIL---NNIYVVLKEVNSEYLLKGIKTIEAN 351
D G + V +V G G A++ + V +K++ + +K
Sbjct: 299 --DRGADAQPVALRSVGILGGGLMGGGIAYVTACKGELPVRIKDIQPRGINHALKYSWDL 356
Query: 352 VRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACP 411
+ V R L + + + ++ G LDY F D+VIEAV E + LKQK+ SE+E+ C
Sbjct: 357 LDKQVRRRYLRASERDRQMGLITGSLDYQGFAHRDVVIEAVFEDLVLKQKMVSEVEQHCH 416
Query: 412 PHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMT 471
P I A+NTS++ + + + S R+IG HFFSP MPL+E++ T Q I ++
Sbjct: 417 PETIFASNTSSLPIAEIAAQASRPQRVIGLHFFSPVEKMPLVEVIPHRGTDRQTIATVVK 476
Query: 472 VGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQL 531
+ K+ K P+VV + GF VNR PY A L+ G + ID ++ FG P+GP QL
Sbjct: 477 LAKLQGKTPIVVADKAGFYVNRILAPYINEAMRLLIEGEPIDHIDKSLIEFGFPVGPIQL 536
Query: 532 LDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTYE---KGSK 586
LD G + A+ +R F P ++ +L R G+ N +G Y Y + SK
Sbjct: 537 LDEVGIDTGTKIIPVLEAAWGER-FSPPANIISAILNDDRKGRKNNRGFYLYAVKGRKSK 595
Query: 587 PKPDPSVLPIIEECRRLSNIMPGGKPIS-VTEKEIVEMILFPVVNESCRVLEEGIVVRAS 645
+PDP++ N++ P + ++ +++ E + ++NE+ R +E ++ A
Sbjct: 596 KRPDPAIY----------NLLGIASPQARLSAQQVAERCVMMMLNEAARCFDEQVIRNAR 645
Query: 646 DLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
D D +V G+ FP + GG + D +GA V L++ + YG F P L A +G
Sbjct: 646 DGDIGAVFGIGFPPFLGGPFRYMDRLGAGEVAAILQRLAAQYGPRFTPCDTLLHMAEQG 704
>gi|432627994|ref|ZP_19863970.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE77]
gi|431162605|gb|ELE63046.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE77]
Length = 714
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 227/713 (31%), Positives = 362/713 (50%), Gaps = 33/713 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I ++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIQVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKERPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA I V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG +GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTQGERVEHIDAALVKFGFQVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDAS 651
++ P+I G+ ++ ++ E + ++NE+ R ++E ++ D D +
Sbjct: 600 AIYPLI-------GTQGQGR---ISAPQVAERCVMLMLNEAVRCVDEQVIRSVRDGDIGA 649
Query: 652 VLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 650 VFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>gi|238895854|ref|YP_002920590.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044]
gi|402779645|ref|YP_006635191.1| enoyl-CoA hydratase [Klebsiella pneumoniae subsp. pneumoniae 1084]
gi|238548172|dbj|BAH64523.1| 3-hydroxyacyl-CoA dehydrogenase [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|402540582|gb|AFQ64731.1| Enoyl-CoA hydratase [Klebsiella pneumoniae subsp. pneumoniae 1084]
Length = 714
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 235/716 (32%), Positives = 371/716 (51%), Gaps = 40/716 (5%)
Query: 8 MEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGG 64
+EV D +A+IT+ P +N L + ++ + V+ +V ++ F G
Sbjct: 9 LEVRADKIAVITIDAPGEKMNTLKAEFGSQVRGLIRQLRDDKSVRGVVFISAKADNFIAG 68
Query: 65 FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
DIN+ + A + + +++ I P++AA+ G LGGGLELA+ CH RI
Sbjct: 69 ADINMIARCRSAQEAEALARQGQQIMAE-IHGLSIPVIAAIHGACLGGGLELALACHGRI 127
Query: 125 AA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDA 179
+ KT+LGLPE+ LG++PG TQRLPRL+G+S A++MML K + + K GL+D
Sbjct: 128 CSDDEKTRLGLPEVQLGLLPGSGGTQRLPRLIGVSTALDMMLTGKQLRPRQALKAGLVDE 187
Query: 180 VVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLK--LARLQAKKTAPN 237
VV LL+ A+++A + +P R + +++ + R +L + + +KT N
Sbjct: 188 VVPQAILLQA----AVELALKGRPTSREVPVRERVLAGPLGRHLLFQFVGKQTQRKTQGN 243
Query: 238 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 297
P + L V+E G+ HG SG +EA+ F EL M S+ L +FFA K D
Sbjct: 244 YPAVKRILQVVENGLAHGCSSGYAEEARAFGELAMSPQSQALRSIFFASTDLKK-----D 298
Query: 298 IGLK--PRGVRKVAVIGGGLMGSGIATAHILNN-IYVVLKEVNSEYLLKGIKTIEANVRG 354
G + P +R VAV+GGGLMG GIA + V +K++ + +K +
Sbjct: 299 RGAEAEPAPLRSVAVLGGGLMGGGIAYVTACKGGLPVRIKDIQPRGINHALKYSWDLLNK 358
Query: 355 LVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHC 414
V + +L + + + ++ G DY F D+VIEAV E + LKQ++ SE+E+ P
Sbjct: 359 QVRQRRLRPVERDRQMALISGTTDYQGFAHRDVVIEAVFEDLALKQRMVSEVEQYGGPQT 418
Query: 415 ILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGK 474
I A+NTS++ + + S ++IG HFFSP MPL+E++ + T Q I ++ + K
Sbjct: 419 IFASNTSSLPIGDIAVHASRPGQVIGLHFFSPVEKMPLVEVIPHKGTDPQTIATVVQLAK 478
Query: 475 IIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDL 534
K P+VV + GF VNR PY A L+ G + ID+A+ FG P+GP QLLD
Sbjct: 479 RQGKTPIVVADKAGFYVNRILAPYINEAMRLLVEGEPIEVIDNALVKFGFPVGPIQLLDE 538
Query: 535 AGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTYE---KGSKPKP 589
G + AF +R F P ++D +LK R G+ N +G Y YE + SK +P
Sbjct: 539 VGIDTGTKIIPVLESAFGER-FSPPANIIDAILKDDRKGRKNNRGFYLYETKGRKSKKRP 597
Query: 590 DPSVLPIIEECRRLSNIMPGGKPIS-VTEKEIVEMILFPVVNESCRVLEEGIVVRASDLD 648
DP+V P++ G+P S ++ +++ E + ++NE+ R +E I+ A D D
Sbjct: 598 DPAVYPLLGI----------GRPQSRLSAQQVAERCVMMMLNEAARCFDEQIIRSARDGD 647
Query: 649 DASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D +GA V L++ + +G F P L A +G
Sbjct: 648 IGAVFGIGFPPFLGGPFRYMDTIGAGEVAAILQRLAAQFGPRFTPCDTLLRMAEQG 703
>gi|442592050|ref|ZP_21010030.1| Enoyl-CoA hydratase [Escherichia coli O10:K5(L):H4 str. ATCC 23506]
gi|441608203|emb|CCP99056.1| Enoyl-CoA hydratase [Escherichia coli O10:K5(L):H4 str. ATCC 23506]
Length = 714
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 227/713 (31%), Positives = 362/713 (50%), Gaps = 33/713 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I ++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIQVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKERPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA I V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K +VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTSIVVRDKAGFYVNRILAPYINEAIRMLTQGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDAS 651
++ P+I G+ ++ ++ E + ++NE+ R ++E ++ D D +
Sbjct: 600 AIYPLI-------GTQGQGR---ISAPQVAERCVMLMLNEAVRCVDEQVIRSVRDGDIGA 649
Query: 652 VLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 650 VFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>gi|419386966|ref|ZP_13927844.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC14D]
gi|378231493|gb|EHX91604.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC14D]
Length = 714
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 230/715 (32%), Positives = 364/715 (50%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPAIERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNSAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R ++E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCVDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA + +++ + YG+ F P L E +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEMVAIMQRLATQYGSRFTPCERLVEMGARG 702
>gi|300822219|ref|ZP_07102361.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
119-7]
gi|331669040|ref|ZP_08369888.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TA271]
gi|331678287|ref|ZP_08378962.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli H591]
gi|417223371|ref|ZP_12026811.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
96.154]
gi|417269675|ref|ZP_12057035.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
3.3884]
gi|423706373|ref|ZP_17680756.1| fatty acid oxidation complex subunit alpha [Escherichia coli B799]
gi|432377503|ref|ZP_19620493.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE12]
gi|432835317|ref|ZP_20068856.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE136]
gi|300525349|gb|EFK46418.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
119-7]
gi|331064234|gb|EGI36145.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
TA271]
gi|331074747|gb|EGI46067.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli H591]
gi|385712257|gb|EIG49212.1| fatty acid oxidation complex subunit alpha [Escherichia coli B799]
gi|386203173|gb|EII02164.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
96.154]
gi|386228480|gb|EII55836.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
3.3884]
gi|430897909|gb|ELC20097.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE12]
gi|431385677|gb|ELG69664.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE136]
Length = 714
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 229/715 (32%), Positives = 363/715 (50%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNSAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R ++E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCVDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>gi|419143293|ref|ZP_13688031.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC6A]
gi|377993806|gb|EHV56937.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC6A]
Length = 714
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 227/713 (31%), Positives = 362/713 (50%), Gaps = 33/713 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I ++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIQVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQ LPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQCLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKERPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA I V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTQGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDAS 651
++ P+I G+ ++ ++ E + ++NE+ R ++E ++ D D +
Sbjct: 600 AIYPLI-------GTQGQGR---ISAPQVAERCVMLMLNEAVRCVDEQVIRSVRDGDIGA 649
Query: 652 VLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 650 VFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>gi|261252399|ref|ZP_05944972.1| fatty oxidation complex alpha subunit FadJ [Vibrio orientalis CIP
102891 = ATCC 33934]
gi|417954054|ref|ZP_12597094.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
orientalis CIP 102891 = ATCC 33934]
gi|260935790|gb|EEX91779.1| fatty oxidation complex alpha subunit FadJ [Vibrio orientalis CIP
102891 = ATCC 33934]
gi|342816094|gb|EGU50999.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
orientalis CIP 102891 = ATCC 33934]
Length = 707
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 215/651 (33%), Positives = 353/651 (54%), Gaps = 27/651 (4%)
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
F G D+ + A + + + ++ L D P+VAA+ G LGGGLELA+ C
Sbjct: 66 FIAGADVRMLDACTSAKEAQALAEKGQQMFQQL-SDLPYPVVAAIHGPCLGGGLELALAC 124
Query: 121 HARIA--APKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLG 175
R+ + KT+LGLPE+ LG++PG TQRLPRL+GL +++++L K + +++ KLG
Sbjct: 125 DYRVCTDSDKTRLGLPEVQLGLLPGSGGTQRLPRLIGLLPSLDLILTGKQLRAKKAKKLG 184
Query: 176 LIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVL--KLARLQAKK 233
+ DAVV LL+V++ + + + K ++ + + + R+V+ + A+ +K
Sbjct: 185 VADAVVPETILLEVAKSFVEKNSGKSKSKRKASTKEKLISNTGLGRKVIFEQAAKKTNQK 244
Query: 234 TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 293
T N P A L+VI G+ G G KEA+ F ELVM S+ L +FFA T+++
Sbjct: 245 TRGNYPAADAILEVIRFGLEKGFEQGQQKEAERFGELVMTSESKALRSIFFA---TTEMK 301
Query: 294 NVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEANV 352
P+ + AV+GGGLMG+GI+ + + +K+V+++ +L +K
Sbjct: 302 KEHGSDADPKAIANAAVLGGGLMGAGISHVSVAKAKVPTRIKDVSNDGVLNALKYNFKLF 361
Query: 353 RGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPP 412
R +++ + + + L G +D++ F D+VIEAV E + LKQK+ +++E+
Sbjct: 362 EKQRKRRIISKAQLQSKMLQLSGGVDFTRFNHTDIVIEAVFEDLDLKQKMVADVEENAKD 421
Query: 413 HCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTV 472
I ATNTS++ ++ + EK + ++G H+FSP MPL+E++ E TS + I ++
Sbjct: 422 STIFATNTSSLPIHQIAEKAQRPENVVGLHYFSPVEKMPLVEVIPHETTSDETISTVVEF 481
Query: 473 GKIIKKVPVVVGNCTGFAVNRAFFPY-SQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQL 531
+ K P+VV +C GF VNR PY +++A++L+S G + ++D A+ +FG P+GP L
Sbjct: 482 ARKQGKTPIVVKDCAGFYVNRILAPYMNEAAQVLLS-GEPIEQLDKALLNFGFPVGPITL 540
Query: 532 LDLAGYGVAAATSKEFDKAFPDRSFQSPLV-DLLLKSGRNGKANGKGLYTYEKGSKPKPD 590
LD G + A R FQ P V D LL GR G+ +GKG YTY KG K + D
Sbjct: 541 LDEVGVDIGAKIMPILVAELGGR-FQGPDVFDKLLNDGRKGRKSGKGFYTY-KGKKKEVD 598
Query: 591 PSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDA 650
S+ +L + P S+ EK+I + P++NE+ R L+EGI+ D D
Sbjct: 599 KSIY-------KLLGLNPES---SLAEKDIAMRCVLPMLNEAVRCLDEGIIRSPRDGDIG 648
Query: 651 SVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERA 701
++ G+ FP + GG + D +G + + + ++ YG+ F P L RA
Sbjct: 649 AIFGIGFPPFLGGPFRYMDQIGIKQLVEIMNEHAKKYGDRFAPCDGLLTRA 699
>gi|419154746|ref|ZP_13699309.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC6C]
gi|377997328|gb|EHV60435.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
DEC6C]
Length = 712
Score = 336 bits (862), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 227/713 (31%), Positives = 362/713 (50%), Gaps = 33/713 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 6 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 65
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I ++AA+ G LGGGLELA+ CH R
Sbjct: 66 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIQVIAAIHGACLGGGLELALACHGR 124
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQ LPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 125 VCTDDPKTVLGLPEVQLGLLPGSGGTQCLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 184
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 185 DVVPHSILLEA----AVELAKKERPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 240
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 241 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 299
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA I V +K++N + + +K + G V
Sbjct: 300 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDINPQGINHALKYSWDQLEGKV 358
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 359 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 418
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 419 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 478
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 479 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTQGERVEHIDAALVKFGFPVGPIQLLDEVG 538
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 539 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 597
Query: 592 SVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDAS 651
++ P+I G+ ++ ++ E + ++NE+ R ++E ++ D D +
Sbjct: 598 AIYPLI-------GTQGQGR---ISAPQVAERCVMLMLNEAVRCVDEQVIRSVRDGDIGA 647
Query: 652 VLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 648 VFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 700
>gi|397171920|ref|ZP_10495318.1| multifunctional fatty acid oxidation complex subunit alpha
[Alishewanella aestuarii B11]
gi|396086638|gb|EJI84250.1| multifunctional fatty acid oxidation complex subunit alpha
[Alishewanella aestuarii B11]
Length = 712
Score = 336 bits (862), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 242/715 (33%), Positives = 367/715 (51%), Gaps = 34/715 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
++ + +D VA+IT+ P +N L + ++ + +K +V ++G F
Sbjct: 9 SLSIRDDKVAVITMDIPGESMNVLKASFADEIDAMLKQLANDSTLKGVVFISGKKDSFIA 68
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DI++ A + + ++ + +E + P+VAA+ G LGGGLELA+ CHAR
Sbjct: 69 GADISMLDACQTAEQAETIAAMGQQMF-DRLEQLRLPVVAAIHGPCLGGGLELALACHAR 127
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+A+ PKT LGLPE+ LG++PG TQRLP+LVG+ KA++M+L K + + + KLGL+D
Sbjct: 128 VASSSPKTVLGLPEVQLGLLPGSGGTQRLPKLVGVQKALDMILTGKQVRAAQAKKLGLVD 187
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQA-----KK 233
VV LL + AL RR+ +SL DKL L KL QA KK
Sbjct: 188 EVVPESILLDAAVKKALAGKPRREAKKQSL--LDKL--LENTGPGRKLVFSQALKQTLKK 243
Query: 234 TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 293
T N P ++VI+ G+ G G+ EAK F +L M S L +FFA K
Sbjct: 244 TQGNYPAALRIIEVIQTGVEQGYQKGLAAEAKAFGQLCMTPESAALRSIFFATTQMKKES 303
Query: 294 NVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEANV 352
D KPR VRK AV+GGGLMG GIA + V +K++ + + +K +
Sbjct: 304 GAGDA--KPRKVRKAAVLGGGLMGGGIANVSATKAGVAVRIKDIAEQGINNALKYSFDIL 361
Query: 353 RGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPP 412
+ +++ + L ++ G DYS F DVD+V+EAV E + LKQ++ +++E+ C
Sbjct: 362 NKKYKKRFISKAEMQKQLLLITGTTDYSGFHDVDIVVEAVFEDLSLKQQMVADIEQHCAE 421
Query: 413 HCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTV 472
H I A+NTS++ ++ + EK + + +IG H+FSP MPL+E++ E+TSA+ I +
Sbjct: 422 HTIFASNTSSLPIHKIAEKAARPENVIGLHYFSPVDKMPLVEVIAHEKTSAETIATTVAF 481
Query: 473 GKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLL 532
+ K P+VV + GF VNR Y A ++ G V +ID A+ FG P+GP LL
Sbjct: 482 ARKQGKTPIVVKDGAGFYVNRILALYMNEAANILLAGEPVEKIDRALVKFGFPVGPVTLL 541
Query: 533 DLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKP--- 589
D G V A S +R D LL GR GK KG Y Y K +K
Sbjct: 542 DEVGIDVGAKISPILTAELGERFAAPAAFDKLLADGRKGKKTEKGFYLYGKAAKKGKKLV 601
Query: 590 DPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
D SV ++ + P ++ +EI ++NE+ R LEEGI+ A D
Sbjct: 602 DESVYAVL-------GVTPAP---ALNGEEIASRCTAQMLNEAVRCLEEGIIASARGGDI 651
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
++ G+ FP + GG + D +G N + +L++ +G+ F P L + AT G
Sbjct: 652 GAIFGIGFPPFLGGPFRYIDKLGVNNLVATLRQLESRFGSRFTPCDTLLKMATAG 706
>gi|423109515|ref|ZP_17097210.1| fatty acid oxidation complex subunit alpha [Klebsiella oxytoca
10-5243]
gi|376382249|gb|EHS94983.1| fatty acid oxidation complex subunit alpha [Klebsiella oxytoca
10-5243]
Length = 715
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 225/717 (31%), Positives = 362/717 (50%), Gaps = 40/717 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVK-AIVLTGNGGRFSG 63
T+EV D +A+IT+ P +N L + ++ + +++ A+ ++ F
Sbjct: 9 TLEVRPDNIAVITIDAPGEKMNTLKAEFASEVRGIIRQLRDNKELRGAVFISAKADNFIA 68
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ + H A + + +++ I P++AA+ G LGGGLELA+ CH R
Sbjct: 69 GADINMIARCHSAQEAEALARQGQQIMAE-IHGLPIPVIAAIHGACLGGGLELALACHGR 127
Query: 124 IAAP--KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ + KT+LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + + K GL+D
Sbjct: 128 VCSDDNKTRLGLPEVQLGLLPGSGGTQRLPRLIGVSSALEMILTGKQLRPRQALKAGLVD 187
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVL--KLARLQAKKTAP 236
VV LL+ A++ A + +P R++ +++ + AR +L +A+ KT
Sbjct: 188 EVVPQTILLQT----AVERALKGRPASRTVPARERILAGPLARSLLFRLVAKKTHHKTQG 243
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L VIE G+ G SG +EA+ F EL M S+ L +FFA K
Sbjct: 244 NYPATERILQVIETGLAQGCSSGYAEEARAFGELAMTPQSQALRSIFFASTDLKK----- 298
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHIL---NNIYVVLKEVNSEYLLKGIKTIEANVR 353
D G + V +V G G A++ + V +K++ + +K +
Sbjct: 299 DRGADAQPVALRSVGILGGGLMGGGIAYVTACKGELPVRIKDIQPRGINHALKYSWDLLD 358
Query: 354 GLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPH 413
V R L + + + ++ G LDY F D+VIEAV E + LKQK+ SE+E+ C P
Sbjct: 359 KQVRRRYLRASERDRQMGLITGSLDYQGFAHRDVVIEAVFEDLTLKQKMVSEVEQHCHPE 418
Query: 414 CILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVG 473
I A+NTS++ + + + S R+IG HFFSP MPL+E++ T Q I ++ +
Sbjct: 419 TIFASNTSSLPIAEIAAQASRPHRVIGLHFFSPVEKMPLVEVIPHRGTDRQTIATVVKLA 478
Query: 474 KIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLD 533
K+ K P+VV + GF VNR PY A L+ G + ID ++ FG P+GP QLLD
Sbjct: 479 KLQGKTPIVVADKAGFYVNRILAPYINEAMRLLIEGEPIDHIDKSLVQFGFPVGPIQLLD 538
Query: 534 LAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTYE---KGSKPK 588
G + A+ +R F P ++ +L R G+ N +G Y Y + SK +
Sbjct: 539 EVGIETGTKIIPVLEAAWGER-FSPPANIISAILNDDRKGRKNNRGFYLYAVKGRKSKKR 597
Query: 589 PDPSVLPIIEECRRLSNIMPGGKPIS-VTEKEIVEMILFPVVNESCRVLEEGIVVRASDL 647
PDP++ N++ P + ++ +++ E + ++NE+ R +E ++ A D
Sbjct: 598 PDPAIY----------NLLGIASPQARLSAQQVAERCVMMMLNEAARCFDEQVIRNARDG 647
Query: 648 DDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
D +V G+ FP + GG + D +GA V L++ + YG F P L A +G
Sbjct: 648 DIGAVFGIGFPPFLGGPFRYMDRLGAGEVAAILQRLAAQYGPRFTPCDTLLHMAEQG 704
>gi|302125403|gb|ADK93988.1| enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase-like protein
[Sphingopyxis macrogoltabida]
Length = 695
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 247/703 (35%), Positives = 367/703 (52%), Gaps = 35/703 (4%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DGVA++T+ NPPVNAL + AGL +A + V+A+V+ G F G DI+ F K
Sbjct: 21 DGVAVLTIANPPVNALGAALRAGLAGAVTQAGADPSVEAVVVAAEGKVFIAGADISEFGK 80
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ ++ IE + P+VAA+ G ALGGGLELA+ CHAR+A +LG
Sbjct: 81 PPVP--------PVLPDLLEQIEAMEIPVVAAIGGTALGGGLELALACHARVAKSGAKLG 132
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 189
LPE+ LG+IPG TQRLPRL+G + A+++M+ + +T+ GL DAV + L +
Sbjct: 133 LPEVKLGLIPGAGGTQRLPRLIGAAAALKLMIDGEPVTAGGTAPSGLTDAVCEGDPLEQA 192
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 249
IA R L R+ + E + A K+ A + P AC++ +
Sbjct: 193 -------IAMARSLAQSGLRRSRDADAQGAREEFEETAAALLKRNAGH-PSVAACVEAVR 244
Query: 250 EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQR-ATSKVPNVTDIGLKPRGVRKV 308
G KE F LV S+ L +VFFA+R A V D +PR + +
Sbjct: 245 ATFDLPFAEGQAKERAAFLSLVEDTRSKALRYVFFAERRAVRPVGAAADA--QPRSIDRA 302
Query: 309 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 368
A+IGGG MG GIA I V + E + L +G++ I N V RG L++D +
Sbjct: 303 AIIGGGTMGGGIAMCFANAGIPVTIIETGQDGLDRGLQRIAKNYDISVKRGSLSEDARDA 362
Query: 369 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428
LK++ G LD + D+VIEAV E + LK+ IF L + ILATNTS +D+N +
Sbjct: 363 RLKLIHGSLDMESTGEADIVIEAVFEDMALKKDIFGRLGQLTKAGTILATNTSYLDVNEI 422
Query: 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488
+ + ++G HFFSPA+VM LLE+VR E T V+ M +G ++ K+PV+VG C G
Sbjct: 423 ANASGRPEDVLGLHFFSPANVMRLLEVVRGEATDPAVLATAMKLGSVLGKLPVMVGVCHG 482
Query: 489 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
F NR + A L+ G +D A+ +FG +GPF D+AG + +
Sbjct: 483 FVGNRMLAVRNAQAEQLLLEGALPQNVDRALTAFGFRMGPFATSDMAGLDIGWRMRQATG 542
Query: 549 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIM 607
++ +P+ D L + GR G+ KG Y YE+G + P D V +IE R+S
Sbjct: 543 QS-------APVADTLCEMGRFGQKAAKGFYRYEEGDRTPHADEDVSQLIE---RISADR 592
Query: 608 PGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFW 667
G S ++EIV+ +++P++NE ++LEEGI ASD+D + G +P++RGG ++
Sbjct: 593 -GVSRRSFDDREIVQRLVYPMINEGAKILEEGIANSASDIDVIWLNGYGWPAWRGGPMYL 651
Query: 668 ADAVGANYVYTSLKKWSQLYG-NFFKPSRFLEERATKGIPLSA 709
AD VG + L+ + G +PS L + A +G S+
Sbjct: 652 ADQVGLQEIARYLEDLADELGLESLRPSALLRQLAAEGRGFSS 694
>gi|300918485|ref|ZP_07135079.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
115-1]
gi|432534611|ref|ZP_19771586.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE234]
gi|300414345|gb|EFJ97655.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
115-1]
gi|431060247|gb|ELD69581.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE234]
Length = 714
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 229/715 (32%), Positives = 363/715 (50%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNSAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GNTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R ++E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCVDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>gi|218695940|ref|YP_002403607.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli 55989]
gi|407470221|ref|YP_006783336.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O104:H4 str. 2009EL-2071]
gi|407481116|ref|YP_006778265.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O104:H4 str. 2011C-3493]
gi|410481663|ref|YP_006769209.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O104:H4 str. 2009EL-2050]
gi|417805893|ref|ZP_12452842.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O104:H4 str. LB226692]
gi|417833639|ref|ZP_12480087.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O104:H4 str. 01-09591]
gi|422988455|ref|ZP_16979228.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. C227-11]
gi|422995346|ref|ZP_16986110.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. C236-11]
gi|423000469|ref|ZP_16991223.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 09-7901]
gi|423004138|ref|ZP_16994884.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 04-8351]
gi|423010663|ref|ZP_17001397.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-3677]
gi|423019890|ref|ZP_17010599.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-4404]
gi|423025057|ref|ZP_17015754.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-4522]
gi|423030878|ref|ZP_17021566.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-4623]
gi|423038704|ref|ZP_17029378.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-4632 C1]
gi|423043823|ref|ZP_17034490.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-4632 C2]
gi|423045552|ref|ZP_17036212.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-4632 C3]
gi|423054091|ref|ZP_17042898.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-4632 C4]
gi|423061066|ref|ZP_17049862.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-4632 C5]
gi|429719935|ref|ZP_19254866.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. Ec11-9450]
gi|429771818|ref|ZP_19303840.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-02030]
gi|429776762|ref|ZP_19308740.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-02033-1]
gi|429785490|ref|ZP_19317387.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-02092]
gi|429791380|ref|ZP_19323236.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-02093]
gi|429797207|ref|ZP_19329014.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-02281]
gi|429798804|ref|ZP_19330604.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-02318]
gi|429807317|ref|ZP_19339043.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-02913]
gi|429812217|ref|ZP_19343902.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-03439]
gi|429817738|ref|ZP_19349378.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-04080]
gi|429822949|ref|ZP_19354546.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-03943]
gi|429908464|ref|ZP_19374428.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. Ec11-9941]
gi|429914335|ref|ZP_19380283.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. Ec11-4984]
gi|429919366|ref|ZP_19385298.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. Ec11-5604]
gi|429925185|ref|ZP_19391099.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. Ec11-4986]
gi|429929122|ref|ZP_19395024.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. Ec11-4987]
gi|429935661|ref|ZP_19401547.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. Ec11-4988]
gi|429941341|ref|ZP_19407215.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. Ec11-5603]
gi|429944021|ref|ZP_19409884.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. Ec11-6006]
gi|429951621|ref|ZP_19417467.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. Ec12-0465]
gi|429954934|ref|ZP_19420766.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. Ec12-0466]
gi|254788661|sp|B7LBJ5.1|FADJ_ECO55 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|218352672|emb|CAU98453.1| fused enoyl-CoA hydratase and epimerase and isomerase ;
3-hydroxyacyl-CoA dehydrogenase [Escherichia coli 55989]
gi|340734521|gb|EGR63651.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O104:H4 str. 01-09591]
gi|340739805|gb|EGR74037.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O104:H4 str. LB226692]
gi|354862181|gb|EHF22619.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. C236-11]
gi|354867466|gb|EHF27888.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. C227-11]
gi|354869585|gb|EHF29995.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 04-8351]
gi|354873440|gb|EHF33817.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 09-7901]
gi|354880146|gb|EHF40482.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-3677]
gi|354889570|gb|EHF49819.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-4404]
gi|354893165|gb|EHF53369.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-4522]
gi|354895302|gb|EHF55491.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-4632 C1]
gi|354897576|gb|EHF57734.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-4623]
gi|354898937|gb|EHF59088.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-4632 C2]
gi|354912988|gb|EHF72986.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-4632 C5]
gi|354915993|gb|EHF75969.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-4632 C3]
gi|354917908|gb|EHF77870.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-4632 C4]
gi|406776825|gb|AFS56249.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O104:H4 str. 2009EL-2050]
gi|407053413|gb|AFS73464.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O104:H4 str. 2011C-3493]
gi|407066256|gb|AFS87303.1| multifunctional fatty acid oxidation complex subunit alpha
[Escherichia coli O104:H4 str. 2009EL-2071]
gi|429348666|gb|EKY85427.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-02092]
gi|429360075|gb|EKY96735.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-02030]
gi|429361885|gb|EKY98537.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-02093]
gi|429362027|gb|EKY98676.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-02033-1]
gi|429362157|gb|EKY98805.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-02281]
gi|429365047|gb|EKZ01664.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-02318]
gi|429375778|gb|EKZ12311.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-02913]
gi|429379072|gb|EKZ15578.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-03439]
gi|429380423|gb|EKZ16914.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-03943]
gi|429391954|gb|EKZ28356.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. 11-04080]
gi|429405339|gb|EKZ41605.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. Ec11-4984]
gi|429410853|gb|EKZ47074.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. Ec11-9450]
gi|429414565|gb|EKZ50740.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. Ec11-4987]
gi|429421174|gb|EKZ57296.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. Ec11-4986]
gi|429429508|gb|EKZ65577.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. Ec11-5604]
gi|429432195|gb|EKZ68235.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. Ec11-4988]
gi|429436401|gb|EKZ72417.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. Ec11-5603]
gi|429438606|gb|EKZ74599.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. Ec11-6006]
gi|429448228|gb|EKZ84145.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. Ec12-0465]
gi|429451228|gb|EKZ87119.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. Ec11-9941]
gi|429457891|gb|EKZ93729.1| fatty acid oxidation complex subunit alpha [Escherichia coli
O104:H4 str. Ec12-0466]
Length = 714
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 229/715 (32%), Positives = 364/715 (50%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTACKVG-LPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNSAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+ + FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAVLVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R ++E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCVDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>gi|119387515|ref|YP_918549.1| 3-hydroxyacyl-CoA dehydrogenase [Paracoccus denitrificans PD1222]
gi|119378090|gb|ABL72853.1| 3-hydroxyacyl-CoA dehydrogenase [Paracoccus denitrificans PD1222]
Length = 646
Score = 335 bits (860), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 234/669 (34%), Positives = 351/669 (52%), Gaps = 37/669 (5%)
Query: 6 VTMEVGNDG-VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGG 64
+T+ + G +A++T+ NPPVNAL+ + GL D + + V A+VL G F G
Sbjct: 1 MTVTIARQGEIAVVTVDNPPVNALSAALRQGLWDAADTLDADASVAAVVLVCAGRTFIAG 60
Query: 65 FDINVFQKVHGAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHA 122
D+ F K P V L +V IE +KP AA+ G ALGGGLE+A+GC
Sbjct: 61 ADVTEFGK----------PPVPPHLPDLVARIEGAQKPWTAAIHGSALGGGLEVALGCRF 110
Query: 123 RIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDA 179
R+A P LGLPE++LG++PG T R PR+VG+ A++++ + + + + + GL+DA
Sbjct: 111 RVAVPDASLGLPEVSLGIVPGAGGTVRTPRVVGVPAAVDLVTSGRPMRAAKAAEAGLVDA 170
Query: 180 VVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMP 239
V+ + LL+ + +A R P S + A + +A++ AP
Sbjct: 171 VIQGD-LLEGAVTFARQALTRPLPEPASSRPVAAPEAEFWAEQEKAVAKVAKGAAAPL-- 227
Query: 240 QHQACLDVIEEGIVHGGYSGVLK-EAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDI 298
+ ACL E G++ + E + F EL D + L HVFFA+RA + + D+
Sbjct: 228 RALACLRKAAEA----GFAEAMAFERETFLELRGSDQAAALRHVFFAERAAPRPAALRDV 283
Query: 299 GLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTR 358
+P +R+ AVIGGG MG+GIA A + VVL E + E + +G+ + G V R
Sbjct: 284 --EPLPLRRAAVIGGGTMGAGIAAALRDAGLPVVLVERDDEAVARGMANLRGIFDGAVRR 341
Query: 359 GKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 418
GKLT+ +A L + G DY+ D D+VIEAV E + +K+ +F +L +AC P +LAT
Sbjct: 342 GKLTEAQAAARLAGVAGTTDYAALADADLVIEAVFEEIGVKRAVFEQLARACGPDAVLAT 401
Query: 419 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKK 478
NTS +D + E + R IG HFFSPA+VM LLEIV TS + + + + +KK
Sbjct: 402 NTSYLDPRAIAEGLPNPGRFIGLHFFSPANVMKLLEIVPVPETSDRTLATGFALARALKK 461
Query: 479 VPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYG 538
+PV G C GF NR Y +A LV GV + ID+A+R G +GPF+ DL G
Sbjct: 462 IPVRAGICEGFIGNRILKRYRAAAEALVRKGVPIAEIDAAMRGHGFAMGPFEAQDLGGLD 521
Query: 539 VAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGS-KPKPDPSVLPII 597
+A + A D L D+L++ GR G+ G G Y Y G KP+P SV ++
Sbjct: 522 IAFLQREGARAAGQD--VAETLGDILVRVGRKGQKTGGGWYDYAPGERKPQPSASVAELL 579
Query: 598 EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSF 657
I PG +++ +I + ++ + E +L+EGI +D+D + G F
Sbjct: 580 AR-----EIAPGA---AMSRDQIAQALVAEMAAEGQAILDEGIAQAPADIDLVEIHGYGF 631
Query: 658 PSYRGGIVF 666
P +RGG +F
Sbjct: 632 PRWRGGPMF 640
>gi|417602951|ref|ZP_12253521.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
STEC_94C]
gi|345350617|gb|EGW82892.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
STEC_94C]
Length = 714
Score = 335 bits (860), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 228/715 (31%), Positives = 363/715 (50%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G +G EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSTGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNSAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R ++E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCVDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>gi|260772456|ref|ZP_05881372.1| enoyl-CoA hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase/3-hydroxyacyl-CoA
dehydrogenase/3-hydroxybutyryl-CoA epimerase [Vibrio
metschnikovii CIP 69.14]
gi|260611595|gb|EEX36798.1| enoyl-CoA hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase/3-hydroxyacyl-CoA
dehydrogenase/3-hydroxybutyryl-CoA epimerase [Vibrio
metschnikovii CIP 69.14]
Length = 708
Score = 335 bits (859), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 222/654 (33%), Positives = 361/654 (55%), Gaps = 26/654 (3%)
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
F G D+ + A + + ++ L ED P+VAA+ G LGGGLELA+ C
Sbjct: 66 FIAGADVRMLDACTSAQEAQALATRGQQMFQQL-EDLPFPVVAAIHGPCLGGGLELALAC 124
Query: 121 HARIAAP--KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLG 175
R+ KT+LGLPE+ LG++PG TQRLPRL+GL +++++L K + +++ +KLG
Sbjct: 125 DYRVCTDDDKTRLGLPEVMLGLLPGSGGTQRLPRLIGLLPSLDLILTGKQLRAKKAYKLG 184
Query: 176 LIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVL--KLARLQAKK 233
++DA V LL+V+ + D + +R+ SL + L + R+++ + ++ +K
Sbjct: 185 VVDACVPQSVLLEVALRFVGDNSKKRRQAKPSL-KEKLLANTGLGRKIIFDQASKKTEQK 243
Query: 234 TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 293
T N P +A L+VIE G+ G +G+ +EAK F ELVM + S+ L +FFA T+++
Sbjct: 244 TRGNYPAAKAILEVIEHGLNKGLKAGLEQEAKRFGELVMTNESKALRSIFFA---TTEMK 300
Query: 294 NVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEANV 352
+P+ V+ V+V+GGGLMG+GI+ + + V +K+V+++ +L +
Sbjct: 301 KEHGSDAEPKPVKHVSVLGGGLMGAGISHVSVAKAKLPVRIKDVSNDGILNALSYNYGLF 360
Query: 353 RGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPP 412
R +++ + N++ L G D+ F+ D+VIEAV E + LKQ++ +++E+ P
Sbjct: 361 EKQRKRKIISKAQLQNSMMQLAGGTDFRGFQQTDVVIEAVFEDLALKQQMVADVEQHAQP 420
Query: 413 HCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTV 472
I ATNTS++ + + EK + + I+G H+FSP MPL+E++ TS + I ++ +
Sbjct: 421 STIFATNTSSLPIGQIAEKATRPENIVGLHYFSPVEKMPLVEVIPHSTTSPETIATVVAL 480
Query: 473 GKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLL 532
K K P+VV + GF VNR PY A ++ G + +ID A+ +FG P+GP LL
Sbjct: 481 AKKQGKTPIVVKDRAGFYVNRILAPYMNEAANVLMAGETIEKIDKALLNFGFPVGPITLL 540
Query: 533 DLAGYGVAAATSKEFDKAFPDRSFQSPLV-DLLLKSGRNGKANGKGLYTYEKGSKPKP-D 590
D G V + R F+ P V ++LL R G+ GKG Y+Y+KGSK K D
Sbjct: 541 DEVGIDVGSKIMPILVNELGPR-FKGPDVFEVLLNDNRKGRKTGKGFYSYKKGSKKKEVD 599
Query: 591 PSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDA 650
SV +L N+ P K E+EI + P++NE+ R L+EGI+ D D
Sbjct: 600 KSVY-------KLLNLTPESK---WDEQEIAMRCVLPMLNEAVRCLDEGIIHSPRDGDIG 649
Query: 651 SVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
++ G+ FP + GG + D +G + + +K+ +Q YG+ F P L RA+ G
Sbjct: 650 AIFGIGFPPFLGGPFRYMDQIGLDKLIEQMKQHAQKYGDHFAPCDALITRASVG 703
>gi|126729409|ref|ZP_01745223.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein [Sagittula
stellata E-37]
gi|126710399|gb|EBA09451.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein [Sagittula
stellata E-37]
Length = 688
Score = 335 bits (859), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 235/709 (33%), Positives = 354/709 (49%), Gaps = 55/709 (7%)
Query: 17 IITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGA 76
I+TL NPPVNA+ + + GL A + + + +VLTG G F+ G D F
Sbjct: 13 IVTLDNPPVNAIVLAVREGLVAALARAGTEEGLSRVVLTGAGRAFAAGGDAREFDA---- 68
Query: 77 GDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
P V+ L VV IE C+ P VAA+ G+ALGGG ELA+ C RIAAP Q+GLP
Sbjct: 69 ------PAVAPHLNDVVAGIEACEVPWVAAINGVALGGGCELALACRYRIAAPGVQIGLP 122
Query: 135 ELTLGVIP---GTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 191
E+TLGV+P GTQRLPRL+G++ A+E++ K + +E LGL+D V + +
Sbjct: 123 EVTLGVVPGAGGTQRLPRLIGMAAALELIPTGKPVNAERAEALGLVDGVAVDPLAVALG- 181
Query: 192 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKL---------ARLQAKKTAPNMPQHQ 242
LD+ G+L+ A V L A MPQ
Sbjct: 182 ---LDV-----------------GTLALAAPVCDLPVPEMDAEAVEAAQALAAKKMPQQV 221
Query: 243 ACLDVIEEGIVHGGYS---GVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIG 299
A L I + G+ +E + F L +R L HVFFA+R +K P +
Sbjct: 222 APLTAIALIASTPAVTLAEGLAEERRAFLTLRTDSQARALRHVFFAERG-AKAPRWLEDA 280
Query: 300 LKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRG 359
P VAV+GGG MG+GIA A + + V L E ++ + + + + V + RG
Sbjct: 281 --PGDTGHVAVVGGGTMGAGIAYACLNAGLRVTLLETGADGVTRAEENVGRIVDASLKRG 338
Query: 360 KLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATN 419
+++ A L DY+ + + IEA ES+ +K++IF L+ A P +LATN
Sbjct: 339 LISEAGAKERRARLAVASDYAAAEGAGLAIEAAFESMDVKREIFGRLQAALSPDAVLATN 398
Query: 420 TSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKV 479
TS +D++ + R++G HFF+PAH+M LLEIV+ E TS + + + K ++KV
Sbjct: 399 TSYLDIDEIARSVDDPARVVGLHFFAPAHIMKLLEIVKGEATSDRALASGFALAKTLRKV 458
Query: 480 PVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGV 539
PV+ G C GF NR Y ++A ++ G + ID A+ +FG +GP++ DL+G +
Sbjct: 459 PVLAGVCDGFIGNRILARYREAADTVLMDGSTPWEIDEAMVAFGYAMGPYEAQDLSGLDI 518
Query: 540 AAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEE 599
A A + D P+ D +++ G+ G+ G G Y Y G DP V + E
Sbjct: 519 AHANRRRQDATRDPARRYIPIADRMVELGKLGRKTGAGWYRYPGGGGKVEDPIVADLALE 578
Query: 600 CRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPS 659
+ I+ + EI E +L ++NE+ +L EGI RA D+D ++ G FP
Sbjct: 579 EAHFAGIV----RVDYAPDEIRERLLLAMINEAADILGEGIAARALDIDLVTLFGYGFPR 634
Query: 660 YRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLS 708
+RGG++++AD G + LK ++ +K S L + A G PL+
Sbjct: 635 WRGGLMWYADEWGVPEIVAKLKVLAEEDPVAWKLSPVLRDCAASGTPLA 683
>gi|429082219|ref|ZP_19145306.1| Enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase /
3-hydroxybutyryl-CoA epimerase [Cronobacter condimenti
1330]
gi|426549173|emb|CCJ71347.1| Enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase /
3-hydroxybutyryl-CoA epimerase [Cronobacter condimenti
1330]
Length = 717
Score = 335 bits (859), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 237/709 (33%), Positives = 362/709 (51%), Gaps = 47/709 (6%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIP-------IVAGLKDKFEEATSRDDVKAIVLTGN 57
T+++ D VA++T+ P +N L IV L+D +R+ + ++
Sbjct: 8 TLQMRPDNVAVVTIDVPGEKMNTLKAAFAREVRAIVKQLRD------NRELAGVVFISAK 61
Query: 58 GGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELA 117
F G DIN+ A + + +++ I +VAA+ G LGGGLELA
Sbjct: 62 PDNFIAGADINMIAGCQNAQEAEALASQGQQIMAE-IRALPVHVVAAIHGACLGGGLELA 120
Query: 118 MGCHARIAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGW 172
+ CH+R+ PKTQLGLPE+ LG++PG TQRLPRLVG+S A+EM+L K + +
Sbjct: 121 LACHSRVCTDDPKTQLGLPEVQLGLLPGSGGTQRLPRLVGVSTALEMILAGKQLRPRQAR 180
Query: 173 KLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQ 230
K GL+D VV LL A+ +A R+P R L +++ G L +A+
Sbjct: 181 KAGLVDDVVPPAILLDA----AIALAKTRRPGARRLPLRERVLAGPLGRTLLFRMVAKKT 236
Query: 231 AKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATS 290
+KT N P Q +DV+ G+ G SG EA+ F EL M S L +FFA T+
Sbjct: 237 HEKTHGNYPAAQRIIDVVRTGLEQGSASGYQAEARAFGELAMTPESAALRGLFFA---TT 293
Query: 291 KVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIE 349
++ T G+ PR + V ++GGGLMG GIA + V +K+++ + + +K
Sbjct: 294 ELKKETGSGVAPRALHSVGILGGGLMGGGIAYVTATKARLPVRIKDISEKGINHALKYSW 353
Query: 350 ANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKA 409
+ V R L + + + ++ DY F+ D+V+EAV E + LKQ + +E+E
Sbjct: 354 DLLEKKVRRRHLRPSERDAQMALISASTDYRGFRHRDIVVEAVFEELTLKQNMVAEIEAH 413
Query: 410 CPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDL 469
PH I A+NTS++ + + + +++IG H+FSP MPL+E++ TS + I
Sbjct: 414 TAPHTIFASNTSSLPIGDIAAGAARPEQVIGLHYFSPVDKMPLVEVIPHAGTSPETIATT 473
Query: 470 MTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 529
+ + K K P+VV +C GF VNR PY A + G + +ID A+ G P+GP
Sbjct: 474 VQLAKKQGKTPIVVADCAGFYVNRILAPYINEAMRCLMEGESIEKIDEALVKRGFPVGPI 533
Query: 530 QLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTYE---KG 584
QLLD G V ++A+ R F +P V +L R G+ NG+G Y Y +
Sbjct: 534 QLLDEVGIDVGTKIMPVLERAYGPR-FSAPDEAVAAILNDDRKGRKNGRGFYLYPAKGRK 592
Query: 585 SKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRA 644
SK + DP+V +I + PGGK ++ EI E + ++NE+ R L+EG+V A
Sbjct: 593 SKKQVDPAVYGLI-------GVKPGGK---LSGDEIAERCVMMMLNEAARCLDEGVVRSA 642
Query: 645 SDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKP 693
D D +V G+ FP + GG + D +GA V +L + S YG F P
Sbjct: 643 RDGDIGAVFGIGFPPFLGGPFRYMDTLGAAQVVAALTRLSTRYGERFTP 691
>gi|430744232|ref|YP_007203361.1| 3-hydroxyacyl-CoA dehydrogenase [Singulisphaera acidiphila DSM
18658]
gi|430015952|gb|AGA27666.1| 3-hydroxyacyl-CoA dehydrogenase [Singulisphaera acidiphila DSM
18658]
Length = 718
Score = 335 bits (859), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 233/719 (32%), Positives = 360/719 (50%), Gaps = 41/719 (5%)
Query: 8 MEVGNDGVAIITLINPP--VNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSGG 64
+E + +A++TL P VN L+ ++A L + R D++ ++ +G G+F G
Sbjct: 7 LEELDGSIALLTLNLPEKKVNTLSQAVLAELAKWIGQLAKRTDLRGLLFRSGKPGQFIAG 66
Query: 65 FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKK----------PIVAAVEGLALGGGL 114
D+ +++ + S E V I+ K P VA ++G +GGG
Sbjct: 67 ADLK---------ELATLAYASQEQVGQAIDFGHKLYSGIARLPFPTVALIDGNCMGGGT 117
Query: 115 ELAMGCHARIAA--PKTQLGLPELTLGVIP---GTQRLPRLVGLSKAIEMMLLSKSITSE 169
ELA+ RIA P+T++ LPE+ +G++P GTQRLPRL+GL+ AIE++ + ++++
Sbjct: 118 ELALAFDERIATATPETKIQLPEVNIGLLPAWGGTQRLPRLIGLN-AIEVICGGQPLSAK 176
Query: 170 EGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLAR- 228
+ +LG+I V ++ L+ R +D W R + + LS + A
Sbjct: 177 KAAELGVIFDAVPADRLVDEGRRL-IDYFQESGEWKRRREQARQPLGLSPDQFTFAFATA 235
Query: 229 --LQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQ 286
L KT P A L I+EG G+ E +V EL + L+ +FF +
Sbjct: 236 EGLLQSKTKGQYPAPLAALKAIKEGCNLPLEQGLEAEKRVALELFGSPIAANLIGIFFMK 295
Query: 287 RATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIK 346
+ P V +KP V +V V+G GLMG+GIA AH + I + +V+ L GIK
Sbjct: 296 NRLAHDPGVDRTDVKPGQVDRVGVVGSGLMGAGIAAAHARSGIPTAMVDVDDARLAAGIK 355
Query: 347 TIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSEL 406
E V + G+ + L L + D D+VIEA+ E+ K + +L
Sbjct: 356 QAEEVVLSRIKIGRAAPMDLADMLAELSTSTGHGILADRDVVIEAITENEEAKVATYKQL 415
Query: 407 EKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVI 466
ILA+NTSTI + + R +G HFFSP M L+E++R E TS + +
Sbjct: 416 AGVLKEGTILASNTSTISITRMAAAAPDPSRFVGMHFFSPVDRMELVEVIRGEATSDETV 475
Query: 467 LDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPI 526
++ + K I+K P+VV +C GF VNR FPY A LL+ GV + ID A +FG+P+
Sbjct: 476 ATIVALAKRIRKTPIVVRDCAGFLVNRVLFPYMNEALLLLQEGVPMDAIDKAATTFGMPV 535
Query: 527 GPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTY-EKGS 585
GP L D+ G + K A+PDR+ L+ L+K+GR GK G G + K S
Sbjct: 536 GPIALHDMVGLDTSFFAGKVLAAAYPDRATMPALLKDLVKAGRLGKKTGAGFRAHGGKSS 595
Query: 586 KPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRAS 645
KP DP+ PI+E R G ++ EI + + P++ E+ RVLEEGIV +
Sbjct: 596 KPAADPAFAPILEAHRT-------GSESTLNAAEITDRLFLPMLLEATRVLEEGIVREPA 648
Query: 646 DLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
D+D +LG+ FP +RGGI+ W DA GA + L++++ L G ++P+ L A G
Sbjct: 649 DVDMGLILGIGFPPFRGGILRWCDAEGAGKIVDRLERFATL-GKRYEPTETLTRHAQTG 706
>gi|340000113|ref|YP_004730996.1| fatty acid oxidation complex alpha subunit [Salmonella bongori NCTC
12419]
gi|339513474|emb|CCC31227.1| putative fatty acid oxidation complex alpha subunit [Salmonella
bongori NCTC 12419]
Length = 715
Score = 335 bits (859), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 224/706 (31%), Positives = 360/706 (50%), Gaps = 33/706 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D VA++ + P +N L A ++ ++ ++ +V ++ F
Sbjct: 8 TLNVRPDNVAVVAIDVPGEKMNTLKTEFAAQVRALLKQIRENKTLQGVVFISAKADNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I+ P++AA+ G LGGGLE+A+ CH R
Sbjct: 68 GADINMIDACQSAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
I KT LGLPE+ LG++PG TQRLPRLVG+S A++M+L K + + + K GL+D
Sbjct: 127 ICTDDAKTVLGLPEVQLGLLPGSGGTQRLPRLVGISTALDMILTGKQLRARQALKTGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + + R L +++ G L A + + A+KT
Sbjct: 187 DVVPQSILLEA----AVELAKKERLAQRRLPVRERILAGPLGRALLFRLVRKKTAQKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + +DVIE G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAIFFASTQVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N++ + +K + V
Sbjct: 302 DAPPGPLHSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINAKGINHALKYSWDQLETKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R + + + L ++ G DY F D+VIEAV E + LKQ++ +E+E+ C PH I
Sbjct: 361 RRRHIKASQRDKQLSLISGSTDYRGFSHRDVVIEAVFEDLALKQQMVAEVEQHCAPHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ ++ + + ++IG HFFSP MPL+E++ TSAQ I + + K
Sbjct: 421 ASNTSSLPISDIAANAARPQQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVQLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G + ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVSDKAGFYVNRILAPYINEAIRMLTEGERIEHIDTALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVASILNDDRKGRKNGRGFYLYGKKGRKSKKQVDP 599
Query: 592 SVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDAS 651
++ +I N+ + ++ +++ E + ++NE+ R +E ++ A D D +
Sbjct: 600 AIYKLI-------NVQGQSR---LSAQQVAERCVMLMLNEAARCFDERVIRSARDGDIGA 649
Query: 652 VLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 697
V G+ FP + GG + D +GA V +L++ + LYG + P L
Sbjct: 650 VFGIGFPPFLGGPFRYMDTLGAGEVVAALRRLATLYGPRYAPCEQL 695
>gi|161407971|ref|YP_269853.2| multifunctional fatty acid oxidation complex subunit alpha
[Colwellia psychrerythraea 34H]
Length = 764
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 247/709 (34%), Positives = 358/709 (50%), Gaps = 31/709 (4%)
Query: 12 NDGVA--IITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSGGFDIN 68
++G+A +I +I VN L + E + IVL +G G F G DIN
Sbjct: 51 DNGIAHLVIDVIGENVNTLKAEFTEQVNAVLAEIKVDKAITGIVLCSGKKGSFVAGADIN 110
Query: 69 VFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA-- 126
+ +V + + + +L+E PIVAA++G LGGGLELAM CHAR+ +
Sbjct: 111 MLDACQSRDEVVALSRQG-QRIFSLLEQLPIPIVAAIDGACLGGGLELAMACHARVCSDN 169
Query: 127 PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS 183
KT LGLPE+ LG++PG TQRLP+LVGL KA++MML K + +++ K GL+D VV S
Sbjct: 170 SKTALGLPEVQLGLLPGSGGTQRLPQLVGLQKALDMMLTGKQLRAKQALKSGLVDDVVPS 229
Query: 184 EELLKVSRLWALDIAARRKPWI-RSLHRTDKLGSLSEAREVLKLARLQAKKTA-----PN 237
LL V+ A+ + R K + R DKL L K+ QA+KT N
Sbjct: 230 SVLLTVAEDLAISLRQRGKKTVKRKQGLMDKL--LENNAVGRKVVYQQAQKTVLAKTQGN 287
Query: 238 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 297
P +D I GI G EA+ F +LVM D S L +FFA A K V D
Sbjct: 288 YPAPAKIIDCIRTGIESSPEKGYRVEAEHFADLVMSDESAQLRQLFFATTAMKKEQGVAD 347
Query: 298 IGLKPRGVRKVAVIGGGLMGSGIA-TAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
+ P + K V+GGGLMG GIA N+ V +K+++ + + + +K + V
Sbjct: 348 V--MPEKMTKAGVLGGGLMGGGIAFVTATKANMPVRVKDISHKGIGQALKYSYQILNKKV 405
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + L M+ G ++Y+ FK +D+V+EAV E + LKQ + +E+E I
Sbjct: 406 KRRFLLNSEMQKQLAMITGSVEYTGFKALDIVVEAVFEDLTLKQNMVAEVEAQGHDKTIF 465
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +IG H+FSP MPL+EI+ ++TS Q I + + K
Sbjct: 466 ASNTSSLPIGKIATNAKRPENVIGLHYFSPVDKMPLVEIIPHDKTSDQTISNTVAFAKKQ 525
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +L+ G + +ID A+ FG P+GP QLLD G
Sbjct: 526 GKTPIVVKDKAGFYVNRILAPYMNEAAILLLAGEPIDKIDKALVKFGFPVGPMQLLDEVG 585
Query: 537 YGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPI 596
V A +R D LL GR GK KG Y YEK + K +
Sbjct: 586 VDVGAKIGPILQADLGERFAAPAAFDKLLADGRLGKKVKKGFYQYEKPTFTKNLQNTFKG 645
Query: 597 I--------EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLD 648
I E L NI P G S++ EI + + ++NE+ R ++EGIV A D D
Sbjct: 646 IKSGHKQVDETIYSLLNIKPMG---SLSAVEISKRCTYMMLNEAARCVDEGIVRNARDGD 702
Query: 649 DASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 697
++ G+ FP + GG + + D +GA V L +W++ +G + P L
Sbjct: 703 IGAIFGIGFPPFLGGPLRYIDKIGAKSVVAQLSQWAEQHGERYTPCEAL 751
>gi|432527120|ref|ZP_19764213.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE233]
gi|431063379|gb|ELD72628.1| fatty acid oxidation complex subunit alpha [Escherichia coli
KTE233]
Length = 714
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 228/715 (31%), Positives = 363/715 (50%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++ + +P R L +++ G L A + + KT
Sbjct: 187 DVVPYSILLEA----AVELVKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ G P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKIGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R ++E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCVDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + YG+ F P L E + +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMSKRG 702
>gi|323530211|ref|YP_004232363.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Burkholderia
sp. CCGE1001]
gi|323387213|gb|ADX59303.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein protein
[Burkholderia sp. CCGE1001]
Length = 692
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 229/690 (33%), Positives = 348/690 (50%), Gaps = 39/690 (5%)
Query: 11 GNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVF 70
GN G +I NPPVNA ++ + GL D + + IV+ G+G F G DI F
Sbjct: 22 GNIGFLVID--NPPVNASSVEVRRGLLDGVHVFGADPTLLGIVIIGDGDTFVAGSDIREF 79
Query: 71 QKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQ 130
+ + S+ V+ IE P+VAA+ G ALGGG ELA+GC RIA +
Sbjct: 80 D--------APIQAPSLPEVILAIEGAPVPVVAAIHGNALGGGFELALGCDGRIAVSGSM 131
Query: 131 LGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELL 187
+GLPE+ LG+IPG TQR+ L G +KAIE++ S+ +T+ E K+GLID VV ++L
Sbjct: 132 VGLPEVGLGMIPGAGGTQRVAYLTGKAKAIEIVTSSRRLTAAEAHKVGLIDLVV-EDDLA 190
Query: 188 KVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDV 247
+ +A + +++ R R S E E A L+ +K P++ Q +++
Sbjct: 191 DAAAKFAKSLDGKKR---RIRDRAVPAAS-DEEIEAATQAALRLRKQLPHVQQAVDAVNM 246
Query: 248 IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV-----PNVTDIGLKP 302
E S +E VF L +R H+FF++R + PN +I
Sbjct: 247 AGEVPFDEALS---RERAVFNVLRKSVAARAFRHLFFSERECLRSRHGGRPNAANI---- 299
Query: 303 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 362
R++ V+G G MG GIA VVL + N L + + L+ +GKL
Sbjct: 300 ---RRIGVVGAGTMGVGIAGCFADAGFEVVLFDTNEAALAAATEKLGQTYNSLLKKGKLE 356
Query: 363 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 422
+ + L ++ V +F +VD+ IEAV E +K+ I ++L + P ILA+NTS
Sbjct: 357 EREIRERLARVRTVGHLQQFSNVDLAIEAVFEDFDVKRDIMAKLHEVLPGEAILASNTSY 416
Query: 423 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 482
+DLN +G + +R IG HFFSPA M LLEIV TE SA+++ + + K + KVPVV
Sbjct: 417 LDLNRLGAEAGRPERTIGLHFFSPAQAMRLLEIVETEYVSAEIVDTAIAIAKRLSKVPVV 476
Query: 483 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAA 542
GF NR F Y + ++ G +ID A+ FG +GPF + DL+G +A
Sbjct: 477 ARVAEGFIGNRIFAAYRKQCEYMMEEGALPEQIDEALEEFGFAMGPFAVADLSGLDIAWK 536
Query: 543 TSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVLPIIEECR 601
+ + + + + D L ++GR G+ G G Y YE G + DP V II +
Sbjct: 537 MRQRLNAGSKPVRYVT-IADALCEAGRFGRKTGAGYYKYEPGGRRGVADPDVHAIIAREQ 595
Query: 602 RLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYR 661
+ ++ P ++++ EI+E L +VNE+ +V+ EG+ R SD+D A V G FP +
Sbjct: 596 QKKGVV----PRTLSKHEIIERALAAIVNEAAKVMGEGVASRTSDIDVALVHGYGFPRHL 651
Query: 662 GGIVFWADAVGANYVYTSLKKWSQLYGNFF 691
GG +FWA G + + +K+ G F
Sbjct: 652 GGPIFWAQQRGVDKTHEMMKRLRAASGPDF 681
>gi|429121601|ref|ZP_19182220.1| Enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase /
3-hydroxybutyryl-CoA epimerase [Cronobacter sakazakii
680]
gi|426323907|emb|CCK12957.1| Enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase /
3-hydroxybutyryl-CoA epimerase [Cronobacter sakazakii
680]
Length = 717
Score = 335 bits (858), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 230/673 (34%), Positives = 347/673 (51%), Gaps = 32/673 (4%)
Query: 45 SRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAA 104
+RD + ++ F G DIN+ A + + +++ I +VAA
Sbjct: 49 NRDLAGVVFISAKPDNFIAGADINMIAHCQSAQEAEALASQGQQIMAE-IRALPVHVVAA 107
Query: 105 VEGLALGGGLELAMGCHARIAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEM 159
+ G LGGGLELA+ CH+RI KTQLGLPE+ LG++PG TQRLPRLVG+S A+EM
Sbjct: 108 IHGACLGGGLELALACHSRICTDDAKTQLGLPEVQLGLLPGSGGTQRLPRLVGVSTALEM 167
Query: 160 MLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSL 217
+L K + + K GL+D VV LL+ A ++A +R+P R L ++L G +
Sbjct: 168 ILAGKQLRPRQALKAGLVDDVVPQSILLEA----AAELAKKRRPAPRRLPVRERLLAGPI 223
Query: 218 SEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSR 277
A + + +KT N P Q +DV+ G+ G SG EA+ F EL M S
Sbjct: 224 GRALLFRMVTQKTHQKTHGNYPAAQRIIDVVRTGLEQGSASGYQAEARAFGELAMTPESA 283
Query: 278 GLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIA-TAHILNNIYVVLKEV 336
L +FFA T+++ T PR + V V+GGGLMG GIA I + V +K++
Sbjct: 284 ALRGLFFA---TTELKKETGSEAAPRALHSVGVLGGGLMGGGIAYVTAIKARLPVRIKDI 340
Query: 337 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 396
+ + + +K + V R L + + + ++ DY F D+V+EAV E +
Sbjct: 341 SEKGINHALKYSWDLLEKKVRRRHLRASERDAQMALISASTDYRGFHQRDIVVEAVFEDL 400
Query: 397 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 456
LKQ + +E+E PH I A+NTS++ + + + +++IG H+FSP MPL+E++
Sbjct: 401 TLKQNMVAEIEAHTAPHTIFASNTSSLPIGDIAAGAARPEQVIGLHYFSPVDKMPLVEVI 460
Query: 457 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 516
TSA+ I + + K K P+VV +C GF VNR PY A + G + +ID
Sbjct: 461 PHAGTSAETIATTVQLAKKQGKTPIVVADCAGFYVNRILAPYINEAMRCLMEGESIEKID 520
Query: 517 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 574
A+ G P+GP QLLD G V ++A+ R F +P V +L R G+ N
Sbjct: 521 EALVKRGFPVGPIQLLDEVGIDVGTKIMPVLERAYGPR-FSAPGDAVAAILNDDRKGRKN 579
Query: 575 GKGLYTYE---KGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNE 631
G+G Y Y + SK + DP+V +I + PGGK ++ +EI E + ++NE
Sbjct: 580 GRGFYLYPAKGRKSKKQVDPAVYGLI-------GVKPGGK---LSSEEIAERCVMMMLNE 629
Query: 632 SCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFF 691
+ R L+EG+V A D D +V G+ FP + GG + D +GA V +L + + YG+ F
Sbjct: 630 AARCLDEGVVRSARDGDIGAVFGIGFPPFLGGPFRYMDTLGAAAVVATLTRLATRYGDRF 689
Query: 692 KPSRFLEERATKG 704
P L A G
Sbjct: 690 TPCDRLLRMAQTG 702
>gi|71145733|gb|AAZ26206.1| fatty oxidation complex, alpha subunit [Colwellia psychrerythraea
34H]
Length = 787
Score = 335 bits (858), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 247/709 (34%), Positives = 358/709 (50%), Gaps = 31/709 (4%)
Query: 12 NDGVA--IITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSGGFDIN 68
++G+A +I +I VN L + E + IVL +G G F G DIN
Sbjct: 74 DNGIAHLVIDVIGENVNTLKAEFTEQVNAVLAEIKVDKAITGIVLCSGKKGSFVAGADIN 133
Query: 69 VFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA-- 126
+ +V + + + +L+E PIVAA++G LGGGLELAM CHAR+ +
Sbjct: 134 MLDACQSRDEVVALSRQG-QRIFSLLEQLPIPIVAAIDGACLGGGLELAMACHARVCSDN 192
Query: 127 PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS 183
KT LGLPE+ LG++PG TQRLP+LVGL KA++MML K + +++ K GL+D VV S
Sbjct: 193 SKTALGLPEVQLGLLPGSGGTQRLPQLVGLQKALDMMLTGKQLRAKQALKSGLVDDVVPS 252
Query: 184 EELLKVSRLWALDIAARRKPWI-RSLHRTDKLGSLSEAREVLKLARLQAKKTA-----PN 237
LL V+ A+ + R K + R DKL L K+ QA+KT N
Sbjct: 253 SVLLTVAEDLAISLRQRGKKTVKRKQGLMDKL--LENNAVGRKVVYQQAQKTVLAKTQGN 310
Query: 238 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 297
P +D I GI G EA+ F +LVM D S L +FFA A K V D
Sbjct: 311 YPAPAKIIDCIRTGIESSPEKGYRVEAEHFADLVMSDESAQLRQLFFATTAMKKEQGVAD 370
Query: 298 IGLKPRGVRKVAVIGGGLMGSGIA-TAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
+ P + K V+GGGLMG GIA N+ V +K+++ + + + +K + V
Sbjct: 371 V--MPEKMTKAGVLGGGLMGGGIAFVTATKANMPVRVKDISHKGIGQALKYSYQILNKKV 428
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + L M+ G ++Y+ FK +D+V+EAV E + LKQ + +E+E I
Sbjct: 429 KRRFLLNSEMQKQLAMITGSVEYTGFKALDIVVEAVFEDLTLKQNMVAEVEAQGHDKTIF 488
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +IG H+FSP MPL+EI+ ++TS Q I + + K
Sbjct: 489 ASNTSSLPIGKIATNAKRPENVIGLHYFSPVDKMPLVEIIPHDKTSDQTISNTVAFAKKQ 548
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +L+ G + +ID A+ FG P+GP QLLD G
Sbjct: 549 GKTPIVVKDKAGFYVNRILAPYMNEAAILLLAGEPIDKIDKALVKFGFPVGPMQLLDEVG 608
Query: 537 YGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPI 596
V A +R D LL GR GK KG Y YEK + K +
Sbjct: 609 VDVGAKIGPILQADLGERFAAPAAFDKLLADGRLGKKVKKGFYQYEKPTFTKNLQNTFKG 668
Query: 597 I--------EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLD 648
I E L NI P G S++ EI + + ++NE+ R ++EGIV A D D
Sbjct: 669 IKSGHKQVDETIYSLLNIKPMG---SLSAVEISKRCTYMMLNEAARCVDEGIVRNARDGD 725
Query: 649 DASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 697
++ G+ FP + GG + + D +GA V L +W++ +G + P L
Sbjct: 726 IGAIFGIGFPPFLGGPLRYIDKIGAKSVVAQLSQWAEQHGERYTPCEAL 774
>gi|417238042|ref|ZP_12035773.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
9.0111]
gi|386213820|gb|EII24245.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
9.0111]
Length = 714
Score = 335 bits (858), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 228/715 (31%), Positives = 362/715 (50%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ PKT LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + + R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKDRSSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ P+I + RLS ++ E + ++NE+ R ++E ++ D D
Sbjct: 600 AIYPLIGAQGQGRLS------------APQVAERCVMLMLNEAVRCVDEQVIRSVRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D++GA V +++ + Y + F P L E +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYDSRFTPCERLVEMGARG 702
>gi|375262109|ref|YP_005021279.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella oxytoca KCTC 1686]
gi|365911587|gb|AEX07040.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella oxytoca KCTC 1686]
Length = 714
Score = 335 bits (858), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 227/716 (31%), Positives = 357/716 (49%), Gaps = 38/716 (5%)
Query: 7 TMEVGNDGVAIITL--INPPVNALAIPIVAGLKDKFEEATSRDDVK-AIVLTGNGGRFSG 63
T+EV D +A+IT+ +N L + ++ + +++ A+ ++ F
Sbjct: 8 TLEVRPDNIAVITIDASGEKMNTLKAEFASEVRGIIRQIRDNKELRGAVFISAKADNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ + H A + + +++ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIARCHSAQEAEALARQGQQIMAE-IHGLSIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAAP--KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ + KT+LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + + K GL+D
Sbjct: 127 VCSDDDKTRLGLPEVQLGLLPGSGGTQRLPRLIGVSGALEMILTGKQLRPRQALKAGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R++ +++ G L + +A+ KT
Sbjct: 187 EVVPQTILLQT----AIELALKGRPASRAVPARERILAGPLGRSLLFRLVAKKTHHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L VIE G+ G SG +EA+ F EL M S+ L +FFA K
Sbjct: 243 NYPATERILQVIETGLAQGCSSGYAEEARAFGELAMTPQSQALRSIFFASTDLKK----- 297
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHIL---NNIYVVLKEVNSEYLLKGIKTIEANVR 353
D G V +V G G A++ + V +K++ + +K +
Sbjct: 298 DRGADADPVALRSVGILGGGLMGGGIAYVTACKGGLPVRIKDIQPRGINHALKYSWDLLD 357
Query: 354 GLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPH 413
V R L + + + ++ G LDY F D+VIEAV E + LKQK+ SE+E+ C P
Sbjct: 358 KQVRRRYLRASERDRQMGLISGSLDYQGFAHRDVVIEAVFEDLTLKQKMVSEVEQHCRPE 417
Query: 414 CILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVG 473
I A+NTS++ + + S R+IG HFFSP MPL+E++ T Q I + +
Sbjct: 418 TIFASNTSSLPIGEIAAHASRPQRVIGLHFFSPVDKMPLVEVIPHSGTDRQTIATAVKLA 477
Query: 474 KIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLD 533
K+ K P+VV + GF VNR PY A L+ G V ID+A+ FG P+GP QLLD
Sbjct: 478 KLQGKTPIVVADKAGFYVNRILAPYINEAMRLLMEGEPVEHIDNALVKFGFPVGPIQLLD 537
Query: 534 LAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTYE---KGSKPK 588
G + A+ DR F P ++ +L R G+ N +G Y Y + SK +
Sbjct: 538 EVGIDTGTKIIPVLEAAWGDR-FSPPANIISSILNDDRKGRKNNRGFYLYAAKGRKSKKR 596
Query: 589 PDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLD 648
PDP++ + L P + ++ +++ E + ++NE+ R +E +V A D D
Sbjct: 597 PDPAIYAL------LGISSPQAR---LSAQQVAERCVMMMLNEAARCFDERVVRSARDGD 647
Query: 649 DASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D +GA V L++ + YG F P L A +G
Sbjct: 648 IGAVFGIGFPPFLGGPFRYMDTLGAGEVAAILQRLAAQYGPRFTPCDTLLHMAEQG 703
>gi|312882081|ref|ZP_07741831.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
caribbenthicus ATCC BAA-2122]
gi|309370217|gb|EFP97719.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
caribbenthicus ATCC BAA-2122]
Length = 707
Score = 335 bits (858), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 214/652 (32%), Positives = 347/652 (53%), Gaps = 29/652 (4%)
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
F G D+ + + A + + + ++ L D P+VAA+ G LGGGLELA+ C
Sbjct: 66 FIAGADVRMLEACKSAEEAQALAEKGQQMFQQL-SDLPYPVVAAIHGPCLGGGLELALAC 124
Query: 121 HARIA--APKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLG 175
RI+ + KT+LGLPE+ LG++PG TQRLPRL+GL +++++L K + +++ KLG
Sbjct: 125 DYRISTDSGKTKLGLPEVQLGLLPGSGGTQRLPRLIGLLPSLDLILTGKQLRAKKAKKLG 184
Query: 176 LIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVL--KLARLQAKK 233
++DAVV LL+V++ + + K + + + + R+V+ + + +K
Sbjct: 185 IVDAVVPETILLEVAKSFVEKNTGKNKAKQKVSTKEKLIANTGLGRKVIFEQATKKTHEK 244
Query: 234 TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 293
T N P A L+VI G+ G G KEA+ F ELVM S+ L +FFA K
Sbjct: 245 TRGNYPAADAILEVIRFGLEKGFEQGQKKEAQRFGELVMTPESKALRSIFFATTEMKK-- 302
Query: 294 NVTDIGLK--PRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEA 350
D+G + P + + AV+GGGLMG+GI+ + + V +K+V+++ +L ++
Sbjct: 303 ---DLGSEASPTKIERAAVLGGGLMGAGISHVSVAKAKVPVRIKDVSNDGVLNAMQYNYK 359
Query: 351 NVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKAC 410
R +++ + + + L G +D++ FK D+VIEAV E + LKQ + S++E+
Sbjct: 360 LFEKQKKRRIISKAQLQSQMLQLSGGVDFTRFKHTDIVIEAVFEDLELKQTMVSDVEQNA 419
Query: 411 PPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLM 470
P I ATNTS++ + + EK + + ++G H+FSP MPL+E++ E TSA+ + ++
Sbjct: 420 KPTAIFATNTSSLPIKQIAEKAARPENVVGLHYFSPVEKMPLVEVIPHEGTSAETVATVV 479
Query: 471 TVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 530
+ K P+VV +C GF VNR PY A ++ + +D A+ +FG P+GP
Sbjct: 480 EFARKQGKTPIVVKDCAGFYVNRILAPYMNEAAQVLMANEPIESLDKALLNFGFPVGPIT 539
Query: 531 LLDLAGYGVAAATSKEFDKAFPDRSFQSPLV-DLLLKSGRNGKANGKGLYTYEKGSKPKP 589
LLD G + A +R F+ P V D LL R G+ +GKG YTY KG K +
Sbjct: 540 LLDEVGVDIGAKIIPILVNELGER-FKGPDVFDKLLNDNRKGRKSGKGFYTY-KGKKKEV 597
Query: 590 DPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
D SV +L + P K +EK++ + P++NE+ R L+EGI+ D D
Sbjct: 598 DKSVY-------KLLGLNPEAKQ---SEKDMALRCVLPMLNEAVRCLDEGIIRSPRDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERA 701
++ G+ FP + GG + D +G + + + YG+ F P L RA
Sbjct: 648 GAIFGIGFPPFLGGPFRYMDQIGLAKLVEIMNDHATQYGDRFAPCDGLLTRA 699
>gi|395230400|ref|ZP_10408704.1| multifunctional fatty acid oxidation complex subunit alpha
[Citrobacter sp. A1]
gi|424731539|ref|ZP_18160123.1| multifunctional fatty acid oxidation complex subunit alpha
[Citrobacter sp. L17]
gi|394715785|gb|EJF21570.1| multifunctional fatty acid oxidation complex subunit alpha
[Citrobacter sp. A1]
gi|422894190|gb|EKU34005.1| multifunctional fatty acid oxidation complex subunit alpha
[Citrobacter sp. L17]
Length = 715
Score = 334 bits (857), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 223/710 (31%), Positives = 364/710 (51%), Gaps = 33/710 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D VA++T+ P +N L + ++ ++ ++ +V ++ F
Sbjct: 8 TLNVRLDNVAVVTIDVPGEKMNTLKAEFASQVRAILKQIRDNKALRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +++ I P++AA+ G LGGGLE+A+ CH R
Sbjct: 68 GADINMIGSCRSAQEAETLARQGQQMMAE-INALPIPVIAAIHGACLGGGLEMALACHNR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
I KT LGLPE+ LG++PG TQRLPRL+G+S A++M+L K + +++ K+GL+D
Sbjct: 127 ICTDDAKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALDMILTGKQLRAKQALKVGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + R+L +++ G L A ++ A+KT
Sbjct: 187 EVVPHSILLEA----AVELAKKDSSAQRTLPVRERVLAGPLGRALLFRMASKKTAQKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+VIE G+ G SG EA+ F EL M S+ L H+FFA K P +
Sbjct: 243 NYPATERILEVIETGLAQGSSSGYDAEARAFGELAMTSQSQALRHIFFANTDVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N++ + +K + V
Sbjct: 302 DAKPGPLDSVGILGGGLMGGGIAYVTA-CKGGLPVRIKDINAKGINHALKYSWDQLETKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R + + + L ++ G +DY F D++IEAV E + LKQ++ +E+E+ C PH +
Sbjct: 361 RRRHIKASERDKQLALISGSIDYRGFSHRDLIIEAVFEDLSLKQRMVAEVEQNCAPHTVF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+E++ TS Q I + + K
Sbjct: 421 ASNTSSLPIGDIAANATRPEQVIGLHFFSPVEKMPLVEVIPHATTSEQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVETIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY---EKGSKPKPDP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y + SK + DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVASILNDDRKGRKNGRGFYLYGVKGRKSKKQVDP 599
Query: 592 SVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDAS 651
++ +I + G+ +T ++ E + ++NE+ R +E IV A D D +
Sbjct: 600 AIYTLI-------GVQGQGR---LTAAQVAERCVMLMLNEAARCFDEKIVRSARDGDIGA 649
Query: 652 VLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERA 701
V G+ FP + GG + D++GA V +L++ + YG+ F P L + A
Sbjct: 650 VFGIGFPPFLGGPFRYMDSLGAGEVVATLQRLTTQYGSRFAPCEQLLQMA 699
>gi|444377989|ref|ZP_21177194.1| Enoyl-CoA hydratase [Enterovibrio sp. AK16]
gi|443677791|gb|ELT84467.1| Enoyl-CoA hydratase [Enterovibrio sp. AK16]
Length = 707
Score = 334 bits (857), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 232/711 (32%), Positives = 376/711 (52%), Gaps = 34/711 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
++ G++GVA +++ P +N L V + E S+ D+K +VL + F
Sbjct: 13 SLRYGDNGVAWLSIDVPGESMNTLQASFVDEISAILSELESKSDIKGLVLHSAKPDNFVA 72
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G D+ + + A D + + +L + IE +VAA+ G ALGGGLELA+ CH+R
Sbjct: 73 GADVRMLDACNTAEDAQAIAEHGQKLF-SRIEKLPFHVVAAIHGPALGGGLELALACHSR 131
Query: 124 IAAP--KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+A+ KT+LGLPE+ LG++PG TQRLPRL+G+ A++M+L K + +++ K+G++D
Sbjct: 132 VASDDDKTRLGLPEVQLGLLPGSGGTQRLPRLIGVPGALDMILTGKQLRAKKAKKMGVVD 191
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVL--KLARLQAKKTAP 236
VV LL+V A ++A + KP + + +G + R V+ + A+ +KT
Sbjct: 192 DVVPQSVLLRV----AEELALKGKPKRKGSWQDWAMGGNALGRSVMFDQAAKKTREKTRG 247
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P +A L+VI+ G+ G G+ EAK F ELVM S L +FFA A K T
Sbjct: 248 NYPATEAILEVIKYGLDKGVEKGLALEAKRFGELVMSSESAALRSIFFATTAMKKE---T 304
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEANVRGL 355
PR V V V+GGGLMG+GIA N V +K+V+++ +L + +
Sbjct: 305 GADADPRTVTGVTVLGGGLMGAGIANVSATKANTPVRVKDVSNDGILNAMAYSYKLLDKK 364
Query: 356 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCI 415
R +++ + + + G DYS ++V+EAV E + LK ++ +E+E+ I
Sbjct: 365 RKRRIISKAEMQKQMDRISGTTDYSGMSRNNVVVEAVFEDLKLKHQMVAEVEENLAEDTI 424
Query: 416 LATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKI 475
ATNTS++ ++ + E + I+G H+FSP MPL+E++ TS + + ++ + K
Sbjct: 425 FATNTSSLPIHQIAEGAKRPENIVGLHYFSPVDKMPLVEVIPHAGTSEEAVATVVKLAKK 484
Query: 476 IKKVPVVVGNCTGFAVNRAFFPY-SQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDL 534
K P+VV + GF VNR PY +++AR L+S G V ID+A+ FG P+GP LLD
Sbjct: 485 QGKTPIVVADKAGFYVNRILAPYMNEAARTLLS-GESVEHIDNALLDFGFPVGPVTLLDE 543
Query: 535 AGYGVAAATSKEFDKAFPDRSFQSPLV-DLLLKSGRNGKANGKGLYTYEKGSKPKPDPSV 593
G + A S +R F++P V D++L GR G+ +GKG + Y G K + D
Sbjct: 544 VGIDIGAKISPILLNELGER-FRAPDVFDVMLNDGRKGRKSGKGFFVY-NGKKKEVD--- 598
Query: 594 LPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVL 653
+R+ ++ ++ E+ + ++NE+ + L+EG+V A D D +V
Sbjct: 599 -------KRVYTLLGVELKSQLSAHELAIRCVLMMLNEAAQCLDEGVVKSARDGDIGAVF 651
Query: 654 GMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
G+ FP + GG + D +G + L++ YG F P L+ A +G
Sbjct: 652 GIGFPPFLGGPFRYMDHIGIKRLVEMLEQHEAKYGERFAPCELLKAMAAEG 702
>gi|455644361|gb|EMF23461.1| multifunctional fatty acid oxidation complex subunit alpha
[Citrobacter freundii GTC 09479]
Length = 715
Score = 334 bits (857), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 224/710 (31%), Positives = 364/710 (51%), Gaps = 33/710 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D VA++T+ P +N L + ++ ++ ++ +V ++ F
Sbjct: 8 TLNVRLDNVAVVTIDVPGEKMNTLKAEFASQVRAILKQIRDNKALRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +++ I P++AA+ G LGGGLE+A+ CH R
Sbjct: 68 GADINMIGSCRSAQEAETLARQGQQMMAE-INALPIPVIAAIHGACLGGGLEMALACHNR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
I KT LGLPE+ LG++PG TQRLPRL+G+S A++M+L K + +++ K+GL+D
Sbjct: 127 ICTDDAKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSAALDMILTGKQLRAKQALKVGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + R+L +++ G L A ++ A+KT
Sbjct: 187 EVVPHSILLEA----AVELAKKDSSAQRTLPVRERVLAGPLGRALLFRMASKKTAQKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+VIE G+ G SG EA+ F EL M S+ L H+FFA K P +
Sbjct: 243 NYPATERILEVIETGLAQGSSSGYDAEARAFGELAMTSQSQALRHIFFANTDVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P V G G TA + V +K++N++ + +K + V
Sbjct: 302 DAKPGPLNSVGVLGGGLMGGGIAYVTA-CKGGLPVRIKDINAKGINHALKYSWDQLETKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R + + + L ++ G +DY F D++IEAV E + LKQ++ +E+E+ C PH +
Sbjct: 361 RRRHIKASERDKQLALISGSIDYRGFAHRDLIIEAVFEDLSLKQRMVAEVEQNCAPHTVF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+E++ TS Q I + + K
Sbjct: 421 ASNTSSLPIGDIAANATRPEQVIGLHFFSPVEKMPLVEVIPHATTSEQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVETIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY---EKGSKPKPDP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y + SK + DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVASILNDDRKGRKNGRGFYLYGVKGRKSKKQVDP 599
Query: 592 SVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDAS 651
++ +I + G+ +T ++ E + ++NE+ R +E IV A D D +
Sbjct: 600 AIYTLI-------GVQGQGR---LTAAQVAERCVMLMLNEAARCFDEKIVRSARDGDIGA 649
Query: 652 VLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERA 701
V G+ FP + GG + D++GA V +L++ + YG+ F P L + A
Sbjct: 650 VFGIGFPPFLGGPFRYMDSLGAGDVVATLQRLTTQYGSRFAPCEQLLQMA 699
>gi|421727178|ref|ZP_16166342.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella oxytoca M5al]
gi|410371969|gb|EKP26686.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella oxytoca M5al]
Length = 714
Score = 334 bits (857), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 226/716 (31%), Positives = 360/716 (50%), Gaps = 38/716 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVK-AIVLTGNGGRFSG 63
T+EV D +A+IT+ P +N L + ++ + +++ A+ ++ F
Sbjct: 8 TLEVRPDNIAVITIDAPGEKMNTLKAEFASEVRGIIRQIRDNKELRGAVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ + H A + + +++ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIARCHSAQEAEALARQGQQIMAE-IHGLSIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAAP--KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ + KT+LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + + K GL+D
Sbjct: 127 VCSDDDKTRLGLPEVQLGLLPGSGGTQRLPRLIGVSGALEMILTGKQLRPRQALKAGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
V+ LL+ A+++A + +P R++ +++ G L + +A+ KT
Sbjct: 187 EVLAQTILLQT----AVELALKGRPASRAVPARERILAGPLGRSLLFRLVAKKTHHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L V+E G+ G SG +EA+ F EL M S+ L +FFA K
Sbjct: 243 NYPATERILQVMETGLAQGCSSGYAEEARAFGELAMTPQSQALRSIFFASTDLKK----- 297
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHIL---NNIYVVLKEVNSEYLLKGIKTIEANVR 353
D G V +V G G A++ + V +K++ + +K +
Sbjct: 298 DRGADAEPVALRSVGILGGGLMGGGIAYVTACKGGLPVRIKDIQPRGINHALKYSWDLLD 357
Query: 354 GLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPH 413
V R L + + + ++ G LDY F D+VIEAV E + LKQK+ SE+E+ C P
Sbjct: 358 KQVRRRYLRASERDRQIGLISGSLDYQGFAHRDVVIEAVFEDLALKQKMVSEVEQHCRPE 417
Query: 414 CILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVG 473
I A+NTS++ + + + S R+IG HFFSP MPL+E++ T Q I + +
Sbjct: 418 TIFASNTSSLPIGEIAAQASRPQRVIGLHFFSPVDKMPLVEVIPHIGTDRQTIATAVKLA 477
Query: 474 KIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLD 533
K+ K P+VV + GF VNR PY A L+ G V ID+A+ FG P+GP QLLD
Sbjct: 478 KLQGKTPIVVADKAGFYVNRILAPYINEAMRLLMEGEPVEHIDNALVKFGFPVGPIQLLD 537
Query: 534 LAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTYE---KGSKPK 588
G + A+ +R F P ++ +L R G+ N +G Y Y + SK +
Sbjct: 538 EVGIDTGTKIIPVLEAAWGER-FSPPANIISSILNDDRKGRKNNRGFYLYAAKGRKSKKR 596
Query: 589 PDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLD 648
PDP++ + L P + ++E+++ E + ++NE+ R +E +V A D D
Sbjct: 597 PDPAIYSL------LGISSPQAR---LSEQQVAERCVMMMLNEAARCFDERVVRSARDGD 647
Query: 649 DASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D +GA V L++ + YG F P L A +G
Sbjct: 648 IGAVFGIGFPPFLGGPFRYMDTLGAGEVAAILQRLAAQYGPRFTPCDTLLHMAEQG 703
>gi|237732366|ref|ZP_04562847.1| multifunctional fatty acid oxidation complex subunit alpha
[Citrobacter sp. 30_2]
gi|226907905|gb|EEH93823.1| multifunctional fatty acid oxidation complex subunit alpha
[Citrobacter sp. 30_2]
Length = 715
Score = 334 bits (857), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 228/716 (31%), Positives = 364/716 (50%), Gaps = 33/716 (4%)
Query: 3 APRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGG 59
A T+ V D VA++T+ P +N L + ++ + ++ +V ++
Sbjct: 4 ASAFTLNVRLDNVAVVTIDVPGEKMNTLKAEFASQVRAILKHIRDNKALRGVVFISAKPD 63
Query: 60 RFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMG 119
F G DIN+ A + + +++ I P++AA+ G LGGGLE+A+
Sbjct: 64 NFIAGADINMIGSCRSAQEAETLARQGQQMMAE-INALPIPVIAAIHGACLGGGLEMALA 122
Query: 120 CHARIAAP--KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKL 174
CH RI KT LGLPE+ LG++PG TQRLPRL+G+S A++M+L K + +++ K+
Sbjct: 123 CHNRICTDDVKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALDMILTGKQLRAKQALKV 182
Query: 175 GLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAK 232
GL+D VV LL+ A+++A + R+L +++ G L A ++ A+
Sbjct: 183 GLVDEVVPHSILLEA----AVELAKKDSSAHRTLPVRERVLAGPLGRALLFRMASKKTAQ 238
Query: 233 KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 292
KT N P + L+VIE G+ G SG EA+ F EL M S+ L H+FFA K
Sbjct: 239 KTQGNYPATERILEVIETGLAQGSSSGYDAEARAFGELAMTSQSQALRHIFFANTDVKKD 298
Query: 293 PNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANV 352
P +D P + G G TA + V +K++N++ + +K +
Sbjct: 299 PG-SDAKPGPLNSVGILGGGLMGGGIAYVTA-CKGGLPVRIKDINAKGINHALKYSWDQL 356
Query: 353 RGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPP 412
V R + + + L ++ G +DY F D++IEAV E + LKQ++ +E+E+ C P
Sbjct: 357 ETKVRRRHIKASERDKQLALISGSIDYRGFAHRDLIIEAVFEDLSLKQRMVAEVEQNCAP 416
Query: 413 HCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTV 472
H I A+NTS++ + + + +++IG HFFSP MPL+E++ TS Q I + +
Sbjct: 417 HTIFASNTSSLPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHATTSEQTIATTVKL 476
Query: 473 GKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLL 532
K K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLL
Sbjct: 477 AKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVETIDAALVKFGFPVGPIQLL 536
Query: 533 DLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP 589
D G + A+ +R F +P +V +L R G+ NG+G Y Y KG K K
Sbjct: 537 DEVGIDTGTKIIPVLEAAYGER-FSAPANVVASILNDDRKGRKNGRGFYLYGAKGRKSKK 595
Query: 590 --DPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDL 647
DP++ +I + G+ +T +I E + ++NE+ R +E IV A D
Sbjct: 596 QVDPAIYTLI-------GVQGQGR---LTAAQIAERCVMLMLNEAARCFDERIVRSARDG 645
Query: 648 DDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATK 703
D +V G+ FP + GG + D++GA V L++ + YG+ F P L + A +
Sbjct: 646 DIGAVFGIGFPPFLGGPFRYMDSLGAGEVVAVLQRLTTQYGSRFTPCEQLLQMAER 701
>gi|410897627|ref|XP_003962300.1| PREDICTED: trifunctional enzyme subunit alpha, mitochondrial-like
[Takifugu rubripes]
Length = 764
Score = 334 bits (857), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 230/732 (31%), Positives = 374/732 (51%), Gaps = 44/732 (6%)
Query: 1 MAAPRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVK-AIVLTGN 57
+A V EV D VA++ + +P VN L++ + L + E + +DVK A++++
Sbjct: 37 LARTHVDYEVKGD-VAVVRINDPNSKVNTLSVQMQNELTEIMNEIWANNDVKSAVLISKK 95
Query: 58 GGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELA 117
G F G DIN+ Q + +++ + ++ IE KPIVAA+ G LGGGLE A
Sbjct: 96 PGCFIAGADINMIQACADSEEITKLSQEGQKMF-EKIEKSPKPIVAAINGSCLGGGLEFA 154
Query: 118 MGCHARIA--APKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGW 172
+ C RIA + KT LG PE+ LG++PG TQRLP++VGL A +MML ++I +++
Sbjct: 155 IACQYRIATKSKKTVLGTPEVMLGLLPGAGGTQRLPKMVGLPSAFDMMLTGRNIRADKAK 214
Query: 173 KLGLIDAVV-------TSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVL- 224
K+GL++ +V S E ++ L + I R + + + G++ + ++ +
Sbjct: 215 KMGLVNELVDPLGPGLMSPEERTINYLEEVAIECARGIVNKKIPLRKEKGTMQKIQDYIM 274
Query: 225 --KLARLQAKKTAPNMPQHQA---------CLDVIEEGIVHGGYSGVLKEAKVFKELVML 273
+ R Q KT Q+ ++ ++ G+ G +G L E++ F L
Sbjct: 275 SYPVVRNQIYKTVQGKVMKQSKGLYPAPLKIVECVKTGLEQGPTAGYLAESQNFGHLGKT 334
Query: 274 DTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVL 333
S L+ ++ Q A K G R V+ +AV+G GLMG+GIA + + +L
Sbjct: 335 PESAALIGLYHGQVACKK----NRFGTPQREVKTLAVLGAGLMGAGIAQVTVDKGVSTIL 390
Query: 334 KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVI 393
K+ L +G + + + + +T + ++ L L+G LDY+ F+ DMVIEAV
Sbjct: 391 KDTTVAGLARGQEQVYKGLNTKTKKKSITSFERDSILSNLRGQLDYNGFEKADMVIEAVF 450
Query: 394 ESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLL 453
E + +K + E+E PPHCI ATNTS + + + + D+++G H+FSP M LL
Sbjct: 451 EDINIKHAVVKEVEAVIPPHCIFATNTSALPIKDIAAASKRPDKVVGMHYFSPVDKMQLL 510
Query: 454 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVF 513
EI+ TE+TS I + VG KV +VVG+ GF R P A ++ GVD
Sbjct: 511 EIISTEQTSKDTIASAVAVGLKQGKVIIVVGDGPGFYTTRCLAPMLAEAVRVLQEGVDPK 570
Query: 514 RIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLL---LKSGRN 570
++DS SFG P+G L D G VAA +++ KAF R F V++L + G
Sbjct: 571 KLDSLTTSFGFPVGAATLADEVGIDVAAHVAEDLGKAFGSR-FGGGNVEVLKTMVDLGFK 629
Query: 571 GKANGKGLYTYEKGSKPKP-DPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVV 629
G+ +GKG Y Y+ G K K +P + I+E+ R + P ++ ++ ++ V
Sbjct: 630 GRKSGKGCYVYQPGLKSKEINPEIGEILEKYRMTPH------PTVSSDSDVQYRLVSRFV 683
Query: 630 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 689
NE+ L+EGI+ + D +V G+ FP GG + D GA+ + ++++ +YGN
Sbjct: 684 NEAVLCLQEGILNNPLEGDIGAVFGLGFPPCLGGPFRFVDTFGADKLVEKMRQYEAVYGN 743
Query: 690 FFKPSRFLEERA 701
F P + L + A
Sbjct: 744 QFTPCQLLLDHA 755
>gi|300114046|ref|YP_003760621.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Nitrosococcus
watsonii C-113]
gi|299539983|gb|ADJ28300.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Nitrosococcus
watsonii C-113]
Length = 737
Score = 334 bits (857), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 230/730 (31%), Positives = 368/730 (50%), Gaps = 43/730 (5%)
Query: 5 RVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGG 64
R+ GN + + + + VN L + ++ ++K +VL F G
Sbjct: 10 RIERREGNAAIIWLDVPDVSVNTLQADFAQDFNQVLAQLSADKELKVVVLASAKEDFIAG 69
Query: 65 FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
DI + ++ A + + + + L E P+VAA+ G+ LGGGLELA+ C R+
Sbjct: 70 ADIKMLTQLPDAEAARQLSRTAQKAMAQL-EAFPLPVVAAIHGVCLGGGLELALACRGRV 128
Query: 125 A--APKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDA 179
A + +T+LG PE+ LGVIPG TQRLPRLVGL A+ ++L K++++ + LGL+D
Sbjct: 129 ATSSDRTRLGQPEVKLGVIPGVGGTQRLPRLVGLEAALNVILTGKTMSASKARALGLVDE 188
Query: 180 VV------TSEELLKVSRLWALDIAARRKPW------IRSLHRTDKLGSLSEAREVL--K 225
VV + D + P+ + S+ +L SL + L
Sbjct: 189 VVPQPVLLEAALARARELARENDDKSEASPFQWFGQLLSSVLSWRQLRSLLLEKNSLGRS 248
Query: 226 LARLQAKK-----TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLV 280
L QA+K T N+P L+ I+ G+ G +G E + F +L + +R L+
Sbjct: 249 LVFNQARKKVLSHTHGNLPAPLQALEAIKTGMEQGLEAGFKAEVEAFGDLAVSTKARNLM 308
Query: 281 HVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSE 339
+F AQ A K + TD + PR VRKV V+G GLMGSG+A + V LK+V E
Sbjct: 309 ALFLAQSALKK-DSGTDEKVAPRKVRKVGVLGAGLMGSGVAYVTAAKARLPVRLKDVKQE 367
Query: 340 YLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLK 399
L +G++ + V V + ++T + + L +++ +Y+ FK D+VIEAV+E + +K
Sbjct: 368 VLRQGLRVLWNAVTEQVNKRRMTAGEKDRVLALVRPTTEYTGFKQADVVIEAVVEDLEVK 427
Query: 400 QKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTE 459
Q++ E+E P I A+NTS+I ++ + E + + ++G H+FSP +PLLE++ TE
Sbjct: 428 QQVLREVETHGSPEMIFASNTSSIPIHKIAEASDRPEAVVGMHYFSPVPKVPLLEVIVTE 487
Query: 460 RTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAI 519
+++ +VI + +GK K +VV + GF R PY A L++ GV + ID A+
Sbjct: 488 KSAPEVIATCVALGKQQNKTVIVVRDGAGFYTTRILAPYINEATHLLAEGVSIQDIDEAL 547
Query: 520 RSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLY 579
+FG P+GP +LLD G V + ++AF R + +++ L+ S R GK NG+GLY
Sbjct: 548 VNFGFPVGPLKLLDEVGIDVVQKIAHILEEAFGGRMKPTSVLEKLVDSHRFGKKNGQGLY 607
Query: 580 TYE------KGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESC 633
Y+ KG + DPSV P++ I P K + EI L P++NE+
Sbjct: 608 RYQKSGGTFKGKGKQVDPSVYPLL-------GIKPDKK---LEANEIAMRCLLPMLNEAV 657
Query: 634 RVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKP 693
+GI+ A D D +V G+ FP + GG + D G+ + L + G F P
Sbjct: 658 HCYRDGILRSARDGDVGAVFGLGFPPFLGGPFRFMDNRGSGKIVEELTGYQNQLGERFTP 717
Query: 694 SRFLEERATK 703
L + A +
Sbjct: 718 DSLLVDMARQ 727
>gi|350544774|ref|ZP_08914321.1| Enoyl-CoA hydratase /Delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase / 3-hydroxyacyl-CoA dehydrogenase /
3-hydroxybutyryl-CoA epimerase [Candidatus Burkholderia
kirkii UZHbot1]
gi|350527428|emb|CCD38107.1| Enoyl-CoA hydratase /Delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase / 3-hydroxyacyl-CoA dehydrogenase /
3-hydroxybutyryl-CoA epimerase [Candidatus Burkholderia
kirkii UZHbot1]
Length = 609
Score = 334 bits (857), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 205/603 (33%), Positives = 319/603 (52%), Gaps = 26/603 (4%)
Query: 90 VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQR 146
++ +E KP V A+ +A+GGGLELA+G H RIAAP Q+ LPE+ L ++PG TQR
Sbjct: 1 MIKAVEGSAKPAVVAIHAVAMGGGLELALGAHYRIAAPGAQIALPEVKLDLLPGAGGTQR 60
Query: 147 LPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIR 206
LPR VGL A+ M++ + SE+ + L D + ++ LL + +A A R P+ +
Sbjct: 61 LPRAVGLETALNMIVSGTPVPSEKLAQTALFDEIAEAD-LLAAAICFAGQAADRGGPYPK 119
Query: 207 SLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKV 266
D+ A ++ AR A + P C+D IE+G+ G G+
Sbjct: 120 V---RDRKIEHPNAEGFIQFARNSVAAVAQHFPAPHECIDAIEKGVKEGFERGL------ 170
Query: 267 FKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHIL 326
LV SR L H FF +RA K+ +V R + + V+G G MG GIA +
Sbjct: 171 --ALVQTPESRALRHTFFGERAADKIADVPP-DTPVRKIGHIGVVGAGTMGGGIAMNFLN 227
Query: 327 NNIYVVLKEVNSEYLLKGIKTIEANVR--GLVTRGKLTQDKANNALKMLKGVLDYSEFKD 384
+ VVL E + L +G+ TI N V +GKLTQ+K + ++ L Y++
Sbjct: 228 AGLPVVLLETKQDALDRGLATIRRNYEDEAQVKKGKLTQEKVEERMALIHPTLSYADLAQ 287
Query: 385 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFF 444
D+++EAV E + +K+++F +L++ P ILA+NTST+DLN + T +IG HFF
Sbjct: 288 ADLIVEAVFEELGVKEQVFRQLDEIAKPGAILASNTSTLDLNKIASFTKLPGDVIGMHFF 347
Query: 445 SPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARL 504
SP +VM LLE VR E T+ V+ ++ + K I K VV C GF NR Y + A
Sbjct: 348 SPTNVMKLLEAVRGEETAKNVLATVIQLAKKIGKTAVVADVCDGFIGNRMIEQYIRQALF 407
Query: 505 LVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLL 564
++ G +ID AI FG +GPF++ +LAG + A K + P+ + S + D L
Sbjct: 408 MLEEGALPAQIDRAIEQFGFAMGPFRMSNLAGNDIGWAIRKRRYREQPELHY-SRVADRL 466
Query: 565 LKSGRNGKANGKGLYTYEKGSKPKPDPSVLP--IIEECRRLSNIMPGGKPISVTEKEIVE 622
+ G G+ G G Y Y+ G + LP ++++ + G + ++EIVE
Sbjct: 467 CEMGCFGQKTGAGWYDYQPGRR-----DALPSKLVDDMIVAYSKEQGAVRRRIGDEEIVE 521
Query: 623 MILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKK 682
++ +VNE ++L+EGI +ASD+D + G FP +RGG + +AD +G V +++K
Sbjct: 522 RLVLSLVNEGAKILDEGIAAKASDIDMVYLTGYGFPLWRGGPMLYADTIGLYNVERAMRK 581
Query: 683 WSQ 685
++Q
Sbjct: 582 YAQ 584
>gi|149633065|ref|XP_001508292.1| PREDICTED: trifunctional enzyme subunit alpha, mitochondrial
[Ornithorhynchus anatinus]
Length = 763
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 217/678 (32%), Positives = 350/678 (51%), Gaps = 36/678 (5%)
Query: 51 AIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLAL 110
A++++ G F G D+N+ +V+ + +++ L E KPIVAA+ G L
Sbjct: 88 AVLISAKPGCFIAGADLNMLADCKSPQEVTQLSQEGQQMLEKL-EKSPKPIVAAISGSCL 146
Query: 111 GGGLELAMGCHARIAAP--KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKS 165
GGGLELA+ C RIA KT LG+PE+ LG++PG TQRLP++VG+ A +MML ++
Sbjct: 147 GGGLELAIACQYRIATKDKKTVLGVPEVLLGILPGAGGTQRLPKMVGVPAAFDMMLTGRN 206
Query: 166 ITSEEGWKLGLIDAVV-------------TSEELLKVSRLWALDIAARRKPWIRSLHRTD 212
I ++ K+GL+D +V T E L +V+ +A D+A ++ ++ +
Sbjct: 207 IRADRAKKMGLVDQLVEPLGPGLKAPEERTIEYLEEVAVTFAKDLADKKVSAKKNKSLVE 266
Query: 213 KLGSLSEA-----REVLKLARLQAKKTAPNM-PQHQACLDVIEEGIVHGGYSGVLKEAKV 266
K+ S + +++ K + +K + P +DV++ G+ G +G L E++
Sbjct: 267 KVTSYAMTIPFVRQQIYKTVEEKVRKQTKGLYPAPLKIIDVVKTGLEEGNDAGYLSESQK 326
Query: 267 FKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHIL 326
F EL+M + S+ LV ++ Q K G + V+ +A++G GLMG+GIA +
Sbjct: 327 FGELIMTNESKALVGLYHGQVLCKK----NKFGAPQKDVKHLAILGAGLMGAGIAQVSVD 382
Query: 327 NNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVD 386
+ +LK+ L +G + + + V + LT + ++ L G LDY F+ D
Sbjct: 383 KGLKTILKDTTLTGLGRGQQQVFKGLNDKVKKKNLTSFERDSIFSTLTGQLDYQGFEKAD 442
Query: 387 MVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSP 446
MVIEAV E + +K K+ E+E P HC+ A+NTS + +N + + +++IG H+FSP
Sbjct: 443 MVIEAVFEDLNIKHKVLKEVEAVIPAHCVFASNTSALPINEIAAVSKRPEKVIGMHYFSP 502
Query: 447 AHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLV 506
M LLEI+ TE+TS + VG KV +VV + GF R P +
Sbjct: 503 VDKMQLLEIITTEKTSKDTTASAVAVGLKQGKVIIVVKDGPGFYTTRCLAPMMSEVVRAL 562
Query: 507 SLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR-SFQSP-LVDLL 564
GV+ ++DS SFG P+G L+D G VA S+E KAF +R SP L+ L+
Sbjct: 563 QEGVEPKKLDSLTTSFGFPVGAATLVDEVGVDVAGHVSEELGKAFGERLGGGSPELLKLM 622
Query: 565 LKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMI 624
+ G G+ GKG Y Y++G K + S + I L+ + +P T+++I +
Sbjct: 623 VNKGFLGRKAGKGFYIYQEGVKNRSLNSGMDEI-----LTQLRVSARPEVSTDEDIQYRL 677
Query: 625 LFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWS 684
+ VNE+ L+EGI+ ++ D +V G+ FP GG + D GA + LKK+
Sbjct: 678 VTRFVNEAAMCLQEGILATPAEGDIGAVFGLGFPPCLGGPFRFTDLYGARKLVDRLKKYE 737
Query: 685 QLYGNFFKPSRFLEERAT 702
+YG F P + L + A
Sbjct: 738 DVYGKQFTPCQLLVDHAN 755
>gi|290543450|ref|NP_001166417.1| peroxisomal bifunctional enzyme [Cavia porcellus]
gi|1706569|sp|P55100.2|ECHP_CAVPO RecName: Full=Peroxisomal bifunctional enzyme; Short=PBE;
Short=PBFE; Includes: RecName: Full=Enoyl-CoA
hydratase/3,2-trans-enoyl-CoA isomerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|886862|emb|CAA59431.1| enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase bifunctional
enzyme [Cavia porcellus]
gi|1181206|emb|CAA63403.1| 2-enoylacyl-CoA hydratase [Cavia porcellus]
Length = 726
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 242/722 (33%), Positives = 385/722 (53%), Gaps = 52/722 (7%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A+I L NPPVNA++ ++ G+K+ ++A S +K IV++G F G DI+ F
Sbjct: 11 LALIRLRNPPVNAISPAVIHGIKEGLQKAMSDYTIKGIVISGANNIFCAGADIHGF---- 66
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
+ +S + +V+ ++ +KP+VAA++G+ALGGGLEL++GCH RIA + ++G P
Sbjct: 67 -SAPLSFGTGSGLGPIVDEMQRYEKPVVAAIQGMALGGGLELSLGCHYRIAHAEARIGFP 125
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS---EELLK 188
E+TLG++PG TQ LPRL+G+ A++++ + IT+ E KLG++D VV S EE +K
Sbjct: 126 EVTLGILPGARGTQLLPRLIGVPAALDLITSGRHITAGEALKLGILDKVVNSAPVEEAIK 185
Query: 189 VS-RLWALDIAARR---KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 244
+ ++ + RR +P + SL D + EA E K+ R + AP + C
Sbjct: 186 FAQKILNQPLEPRRILNRP-VSSLPNMDAI--FGEAVE--KMRRQHPGQLAP-----ETC 235
Query: 245 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK--- 301
+ ++ + + G++KE ++F L ++ L + FFA+R+ K + K
Sbjct: 236 VRSVQASVQYPYEGGIMKERELFLNLQHSGQAKALQYAFFAERSAPKWSTPSGASWKTAA 295
Query: 302 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEA--NVRGLVTRG 359
R V V V+G G MG GIA + I V+ E + + L K I + +R
Sbjct: 296 ARPVSSVGVLGLGTMGRGIAISFARVGIPVIAVESDPKQLETAQKLITSILEKEASKSRQ 355
Query: 360 KLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATN 419
+ Q ++ + + D + VD+V+EAV E + LK+++F+EL C P L TN
Sbjct: 356 QCGQQRSGPKPRFSSSMKDLA---SVDLVVEAVFEDMNLKKRVFAELSAVCKPEAFLCTN 412
Query: 420 TSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKV 479
TS +D++ + T+ ++IG HFFSPAHVM LLE++ + +S I +M + K IKKV
Sbjct: 413 TSALDVDEIATSTNRPQQVIGTHFFSPAHVMKLLEVIPSRHSSPTTIATVMDLAKKIKKV 472
Query: 480 PVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGV 539
VVVGNC GF NR Y + L+ G ID A+ FG +GPF++ DLAG V
Sbjct: 473 AVVVGNCYGFVGNRMLRSYYEQTNFLLEDGSKPEDIDQALEEFGFRMGPFRVSDLAGLDV 532
Query: 540 A-------AATSKEFDKAFPDR----SFQSPLVDLLLKSGRNGKANGKGLYTYEK--GSK 586
T P R + SP+ D+L + GR G+ G+G Y Y+K G
Sbjct: 533 GWKIRKGQGLTGPSLQGTAPARKRGNARYSPIADMLCELGRFGQKTGQGWYKYDKPLGRI 592
Query: 587 PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASD 646
KPDP + + E R +I KP + EI+E L+ ++NE+ R+L EGI
Sbjct: 593 HKPDPWLSKFLSEYRETHHI----KPRVIGRDEILERCLYALINEAFRILGEGIAASPEH 648
Query: 647 LDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF--FKPSRFLEERATKG 704
+D + G +P ++GG +F+A +VG V L+K+ Q + +P +L++ A++G
Sbjct: 649 IDVIYLHGYGWPRHKGGPMFYAASVGLPTVLEKLQKYYQQNPDIPHLEPCNYLKKLASQG 708
Query: 705 IP 706
P
Sbjct: 709 NP 710
>gi|56412715|ref|YP_149790.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Paratyphi A
str. ATCC 9150]
gi|197361649|ref|YP_002141285.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Paratyphi A
str. AKU_12601]
gi|81359559|sp|Q5PCX6.1|FADJ_SALPA RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|254788614|sp|B5BBA1.1|FADJ_SALPK RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|56126972|gb|AAV76478.1| putative fatty acid oxidation complex alpha subunit [Salmonella
enterica subsp. enterica serovar Paratyphi A str. ATCC
9150]
gi|197093125|emb|CAR58569.1| putative fatty acid oxidation complex alpha subunit [Salmonella
enterica subsp. enterica serovar Paratyphi A str.
AKU_12601]
Length = 715
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 228/708 (32%), Positives = 360/708 (50%), Gaps = 37/708 (5%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINI 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 74 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 132
Query: 128 KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 184
KT LGLPE+ LG++PG TQRLPRLVG+S A++M+L+ K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILIGKQLRARQALKAGLVDDVVPQT 192
Query: 185 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 242
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 193 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 248
Query: 243 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 302
+DVIE G+ G SG EA+ F EL M S+ L VFFA K P +D P
Sbjct: 249 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAVFFASTEVKKDPG-SDAPPGP 307
Query: 303 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 362
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 308 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 366
Query: 363 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 422
+ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 367 ASERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCATHTIFASNTSS 426
Query: 423 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 482
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 427 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 486
Query: 483 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAA 542
V + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 487 VSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVGIDTGTK 546
Query: 543 TSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DPSVLPII 597
+ A+ +R F +P +V +L R G+ NG+G Y Y EKG K K DP++ +I
Sbjct: 547 IIPVLEAAYGER-FSAPANVVASILNDDRKGRKNGRGFYLYGEKGRKSKKQVDPAIYKLI 605
Query: 598 --EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGM 655
+ RLS +++ E + ++NE+ R +E ++ A D D +V G+
Sbjct: 606 GVQGQSRLS------------AQQVAERCVMLMLNEAARCFDEKVIRSARDGDIGAVFGI 653
Query: 656 SFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATK 703
FP + GG + DA+G + +L++ + LYG + P L A +
Sbjct: 654 GFPPFLGGPFRYMDALGPGEMVATLQRLAALYGPRYAPCEQLVRMAER 701
>gi|393761509|ref|ZP_10350146.1| multifunctional fatty acid oxidation complex subunit alpha
[Alishewanella agri BL06]
gi|392607519|gb|EIW90393.1| multifunctional fatty acid oxidation complex subunit alpha
[Alishewanella agri BL06]
Length = 711
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 240/715 (33%), Positives = 367/715 (51%), Gaps = 34/715 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
++ + +D VA+IT+ P +N L + ++ + +K +V ++G F
Sbjct: 9 SLSIRDDKVAVITMDIPGESMNVLKASFADEIDAMLKQLANDSTLKGVVFISGKKDSFIA 68
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DI++ A + + ++ + +E + P+VAA+ G LGGGLELA+ CHAR
Sbjct: 69 GADISMLDACQTAEQAETIAAMGQQMF-DRLEQLRLPVVAAIHGPCLGGGLELALACHAR 127
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+A+ PKT LGLPE+ LG++PG TQRLP+LVG+ KA++M+L K + + + KLGL+D
Sbjct: 128 VASSSPKTVLGLPEVQLGLLPGSGGTQRLPKLVGVQKALDMILTGKQLRAAQAKKLGLVD 187
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQA-----KK 233
VV LL + AL RR+ +SL DKL L KL QA KK
Sbjct: 188 EVVPESILLDAAVKKALAGKPRREAKKQSL--LDKL--LENTGPGRKLVFSQALKQTLKK 243
Query: 234 TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 293
T N P ++VI+ G+ G G+ EAK F +L M S L +FFA K
Sbjct: 244 TQGNYPAALRIIEVIQTGVEQGYQKGLAAEAKAFGQLCMTSESAALRSIFFATTQMKKES 303
Query: 294 NVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEANV 352
D KPR VRK AV+GGGLMG GIA + V +K++ + + +K +
Sbjct: 304 GAGDA--KPRKVRKAAVLGGGLMGGGIANVSATKAGVPVRIKDIAEQGINNALKYSFDIL 361
Query: 353 RGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPP 412
+ +++ + L ++ G DYS F +VD+V+EAV E + LKQ++ +++E+ C
Sbjct: 362 NKKYKKRFISKAEMQKQLLLITGTTDYSGFHNVDIVVEAVFEDLSLKQQMVADIEQHCAE 421
Query: 413 HCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTV 472
H I A+NTS++ ++ + EK + + +IG H+FSP MPL+E++ ++TSA+ I +
Sbjct: 422 HTIFASNTSSLPIHKIAEKAARPENVIGLHYFSPVDKMPLVEVIAHDKTSAETIATTVAF 481
Query: 473 GKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLL 532
+ K P+VV + GF VNR Y A ++ G V +ID A+ FG P+GP LL
Sbjct: 482 ARKQGKTPIVVKDGAGFYVNRILALYMNEAANILLAGEPVEKIDRALVKFGFPVGPVTLL 541
Query: 533 DLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKP--- 589
D G V A S +R D LL GR GK KG Y Y K +K
Sbjct: 542 DEVGIDVGAKISPILTAELGERFAAPAAFDKLLADGRKGKKTEKGFYLYGKAAKKGKKLV 601
Query: 590 DPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
D SV ++ + P ++ EI ++NE+ R LEEGI+ A D D
Sbjct: 602 DESVYAVL-------GVTPAP---ALNSDEIASRCTAQMLNEAVRCLEEGIIASARDGDI 651
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
++ G+ FP + GG + D +G N + +L++ +G+ F P L + A +G
Sbjct: 652 GAIFGIGFPPFLGGPFRYIDNLGVNNLVATLRQLESRFGSRFTPCDTLLKMAEQG 706
>gi|372282089|ref|ZP_09518125.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding, partial [Oceanicola
sp. S124]
Length = 667
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 230/686 (33%), Positives = 348/686 (50%), Gaps = 43/686 (6%)
Query: 27 ALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVS 86
A+ + L + + + D ++ +VL G G F G DI + S
Sbjct: 1 AMGHEVRTALSAQLDAIEADDSLRGVVLMGTGRTFCAGADIRQLA-------APPVEPTS 53
Query: 87 VELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG--- 143
EL + IE KP+VAA+ G LG G ELA+ C R+AAP T+LGLPE+ LG+IPG
Sbjct: 54 PELFLR-IEAMAKPVVAALHGPVLGAGFELALACAGRVAAPGTELGLPEVKLGLIPGAGG 112
Query: 144 TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWA----LDIAA 199
T RLP ++G A++++ ++ I++ E +GL+ V L+ + L LD A
Sbjct: 113 TFRLPAVIGAVAALDLIAAARRISAAEALDIGLLSEVSADHADLRRAGLACARGLLD-AP 171
Query: 200 RRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSG 259
R P R D + A +LK AR AP++ ++ I G +
Sbjct: 172 RSAPGAALGPRAD---FEAAAERLLKRAR---GAEAPHL-----LVEAIGNAFTLEGRAA 220
Query: 260 VLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSG 319
E +F+ L S + H+FFA+R +++P+ G R + + AVIG G MG G
Sbjct: 221 QEAEQALFQRLREGPQSAAMRHLFFAERTAARLPDGL-TGTAGR-ITRAAVIGAGTMGGG 278
Query: 320 IATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 379
IA + V L + ++E L G+ I N V RG+L+ +A + +
Sbjct: 279 IAMCFADAGLPVTLIDKSAEGLAAGLDRIRKNYDISVKRGRLSPSEAEARMARITPAQTL 338
Query: 380 SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRII 439
+D D+VIEAV E + LKQ++F +L+ P +LATNTS++D++ + T R++
Sbjct: 339 EAAQDADLVIEAVFEDMALKQQLFRDLDALLAPGAVLATNTSSLDIDEMAAATGRPQRVV 398
Query: 440 GAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYS 499
G HFFSPA+VM LLE+VR +T A + + + + K V+VGNC GF NR
Sbjct: 399 GLHFFSPANVMTLLEVVRGAKTDADTLATALALAATLGKQAVIVGNCPGFVGNRILRQRH 458
Query: 500 QSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP 559
A L+ G +D I +FG+ +GPFQ+ DLAG VA + + + P
Sbjct: 459 HQAEQLLQQGARPETVDRVITAFGMAMGPFQMADLAGLDVARMVRR-------GQGYALP 511
Query: 560 LVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEE-CRRLSNIMPGGKPISVTEK 618
+ D L GR G+ GKG Y YE G P+PDP V +I + +RL G + T+
Sbjct: 512 VADALCGLGRFGQKTGKGYYLYEDGRTPRPDPQVDQLIADVSKRL-----GAPQRTFTDD 566
Query: 619 EIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYT 678
EI I +P+VNE+ R+L+EGI R SD+D V G FP++RGG+++WAD G +
Sbjct: 567 EIRARIFYPMVNEAARILDEGIAARPSDIDVTYVHGYGFPAWRGGLMYWADGEGLGTLAR 626
Query: 679 SLKKWSQLYG-NFFKPSRFLEERATK 703
+L W++ G + +P+ LE A +
Sbjct: 627 ALAAWAEETGEDRLRPAPLLERLARE 652
>gi|375108846|ref|ZP_09755100.1| multifunctional fatty acid oxidation complex subunit alpha
[Alishewanella jeotgali KCTC 22429]
gi|374571032|gb|EHR42161.1| multifunctional fatty acid oxidation complex subunit alpha
[Alishewanella jeotgali KCTC 22429]
Length = 712
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 241/715 (33%), Positives = 367/715 (51%), Gaps = 34/715 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
++ + +D VA+IT+ P +N L + ++ + +K +V ++G F
Sbjct: 9 SLNIRDDKVAVITMDIPGESMNVLKASFADEIDAMLKQLANDSTLKGVVFISGKKDSFIA 68
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DI++ A + + ++ + +E + P+VAA+ G LGGGLELA+ CH R
Sbjct: 69 GADISMLDACQTAEQAETIAAMGQQMF-DRLEQLRLPLVAAIHGPCLGGGLELALACHVR 127
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+A+ PKT LGLPE+ LG++PG TQRLP+LVG+ KA++M+L K + + + KLGL+D
Sbjct: 128 VASSSPKTVLGLPEVQLGLLPGSGGTQRLPKLVGVQKALDMILTGKQLRAAQAKKLGLVD 187
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQA-----KK 233
VV LL + AL RR+ +SL DKL L KL QA KK
Sbjct: 188 EVVPESILLDAAVKKALAGKPRREAKKQSL--LDKL--LENTGPGRKLVFSQALKQTLKK 243
Query: 234 TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 293
T N P ++VI+ G+ G G+ EAK F +L M S L +FFA K
Sbjct: 244 TQGNYPAALRIIEVIQTGVEQGYQKGLAAEAKAFGQLCMTPESAALRSIFFATTQMKKES 303
Query: 294 NVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEANV 352
D KPR VRK AV+GGGLMG GIA + V +K++ + + +K +
Sbjct: 304 GAGDA--KPRKVRKAAVLGGGLMGGGIANVSATKAGVPVRIKDIAEQGINNALKYRFDIL 361
Query: 353 RGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPP 412
+ +++ + L ++ G DYS F DVD+V+EAV E + LKQ++ +++E+ C
Sbjct: 362 NKKYKKRFISKAEMQKQLLLITGTTDYSGFHDVDIVVEAVFEDLSLKQQMVADIEQHCAE 421
Query: 413 HCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTV 472
H I A+NTS++ ++ + EK + + +IG H+FSP MPL+E++ ++TSA+ I +
Sbjct: 422 HTIFASNTSSLPIHKIAEKAARPENVIGLHYFSPVDKMPLVEVIAHDKTSAETIATTVAF 481
Query: 473 GKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLL 532
+ K P+VV + GF VNR Y A ++ G V +ID A+ FG P+GP LL
Sbjct: 482 ARKQGKTPIVVKDGAGFYVNRILALYMNEAANILLAGEPVEKIDRALVKFGFPVGPVTLL 541
Query: 533 DLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKP--- 589
D G V A S +R D LL GR GK KG Y Y K +K
Sbjct: 542 DEVGIDVGAKISPILTAELGERFAAPAAFDKLLADGRKGKKTEKGFYLYGKAAKKGKKLV 601
Query: 590 DPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
D SV ++ + P ++ +EI ++NE+ R LEEGI+ A D D
Sbjct: 602 DESVYAVL-------GVTPAP---ALNGEEIASRCTAQMLNEAVRCLEEGIIASARDGDI 651
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
++ G+ FP + GG + D +G N + +L++ +G+ F P L + AT G
Sbjct: 652 GAIFGIGFPPFLGGPFRYIDKLGVNNLVATLRQLESRFGSRFTPCDTLLKMATAG 706
>gi|292492128|ref|YP_003527567.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Nitrosococcus
halophilus Nc4]
gi|291580723|gb|ADE15180.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Nitrosococcus
halophilus Nc4]
Length = 746
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 236/735 (32%), Positives = 373/735 (50%), Gaps = 48/735 (6%)
Query: 8 MEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
+E D AII P PVN L E+ T+ D++A+VL F G
Sbjct: 12 VERREDNAAIIWFDVPDAPVNTLQAGFEQDFNHVLEQLTADKDLEAVVLASAKEDFIAGA 71
Query: 66 DINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA 125
DI + ++ + + + + + V+ +E PIVAA+ G+ LGGGLE+A+ C AR+A
Sbjct: 72 DIKMLTQLPDS-EAARQLSHTAQGVMERVESFPLPIVAAIHGVCLGGGLEVALACRARVA 130
Query: 126 AP--KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAV 180
+ +TQ G PE+ LGVIPG TQRLPRLVGL A++M+L K+I + + +GL+D V
Sbjct: 131 SNSRRTQFGQPEVKLGVIPGVGGTQRLPRLVGLETALDMILTGKTIPAPKARAMGLVDEV 190
Query: 181 V------TSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARL----- 229
V + W + + +RS R ++ + L+ L
Sbjct: 191 VPRPVLLEAALARARELAWKELREKKEE-EVRSSRRLGQVLGSLLSLGKLRTLLLEENPA 249
Query: 230 -------QAKK-----TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSR 277
QAKK T N+P L+VI GI G +G E + F +L + +R
Sbjct: 250 GRSVLFSQAKKKVLSHTHGNLPAPLQALEVIRTGIEEGLEAGFKAEVEAFGDLAVSTKAR 309
Query: 278 GLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEV 336
L+ +F A+ A K T+ + PR V KV V+G GLMGSG+ + V LK+V
Sbjct: 310 NLMALFLARSALKKDLG-TEAEVTPRAVHKVGVLGAGLMGSGVTYVTAAEAGLPVRLKDV 368
Query: 337 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 396
+ E L +G++++ V V + ++T + + L +++ +Y+ FK D+VIEAV+E++
Sbjct: 369 SHEVLRQGLRSLWKAVTEQVQKRRMTLGERDRVLALVRPTTEYTGFKRADVVIEAVVENI 428
Query: 397 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 456
+K ++ E+E P I A+NTS+I ++ + E + + +IG H+FSP +PLLE+V
Sbjct: 429 EVKHQVLREVEAHGGPEMIFASNTSSIPIHKIAEASHHPEAVIGMHYFSPVPKVPLLEVV 488
Query: 457 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 516
TE+T+ +V+ + +GK K +VV + GF R PY A L++ GV + ID
Sbjct: 489 VTEKTAPEVVATCVALGKRQNKTVIVVRDGAGFYTTRILGPYINEATHLLAEGVSIEDID 548
Query: 517 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGK 576
A+ +FG P+GP +LLD G V ++ +AF +R + +++ L+ + R GK NG+
Sbjct: 549 RALINFGFPVGPIKLLDEVGIDVVQKIAQILQEAFGERMKPTSVLEKLVGADRFGKKNGQ 608
Query: 577 GLYTYEK----GSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNES 632
G Y Y+K + D SV +L ++ P K + EI L P+VNE+
Sbjct: 609 GFYRYQKVEGVFKGKQVDKSVY-------QLLDVKPHKK---IEANEIAMRCLLPMVNEA 658
Query: 633 CRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFK 692
+GI+ A D D +V G+ FP + GG + D G + L + + +G F
Sbjct: 659 VYCYSDGILRSARDGDVGAVFGLGFPPFLGGPFRFIDNQGTGEIVERLTHYQKQWGERFT 718
Query: 693 PSRFLEERATKGIPL 707
P+ L E A +GI L
Sbjct: 719 PAPLLVELAQQGIGL 733
>gi|420031278|ref|ZP_14545100.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae KPNIH12]
gi|397400591|gb|EJJ92232.1| multifunctional fatty acid oxidation complex subunit alpha
[Klebsiella pneumoniae subsp. pneumoniae KPNIH12]
Length = 687
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 228/675 (33%), Positives = 353/675 (52%), Gaps = 34/675 (5%)
Query: 46 RDD--VKAIV-LTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIV 102
RDD V+ +V ++ F G DIN+ + A + + +++ I P++
Sbjct: 20 RDDKSVRGVVFISAKADNFIAGADINMIARCRSAQEAEALARQGQQIMAE-IHGLSIPVI 78
Query: 103 AAVEGLALGGGLELAMGCHARIAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAI 157
AA+ G LGGGLELA+ CH RI + KT+LGLPE+ LG++PG TQRLPRL+G+S A+
Sbjct: 79 AAIHGACLGGGLELALACHGRICSDDEKTRLGLPEVQLGLLPGSGGTQRLPRLIGVSTAL 138
Query: 158 EMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSL 217
+MML K + + K GL+D VV LL+ A+++A + +P R + +++ +
Sbjct: 139 DMMLTGKQLRPRQALKAGLVDEVVPQAILLQA----AVELALKGRPTSREVPVRERVLAG 194
Query: 218 SEAREVLK--LARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDT 275
R +L + + +KT N P + L V+E G+ HG SG +EA+ F EL M
Sbjct: 195 PLGRHLLFQFVGKQTQRKTQGNYPAVKRILQVVENGLAHGCSSGYAEEARAFGELAMSPQ 254
Query: 276 SRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNN-IYVVLK 334
S+ L +FFA K P + G P +R VAV+GGGLMG GIA + V +K
Sbjct: 255 SQALRSIFFASTDLKKDPG-AEAGPGP--LRSVAVLGGGLMGGGIAYVTACKGGLPVRIK 311
Query: 335 EVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIE 394
++ + +K + V + +L + + + ++ G DY F D+VIEAV E
Sbjct: 312 DIQPRGINHALKYSWDLLNKQVRQRRLRPVERDRQMALISGTTDYQGFAHRDVVIEAVFE 371
Query: 395 SVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLE 454
+ LKQ++ SE+E+ P I A+NTS++ + + S ++IG HFFSP MPL+E
Sbjct: 372 DLALKQRMVSEVEQYGGPQTIFASNTSSLPIGDIAAHASRPGQVIGLHFFSPVEKMPLVE 431
Query: 455 IVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFR 514
++ + T Q I ++ + K K P+VV + GF VNR PY A L+ G +
Sbjct: 432 VIPHKGTDPQTIATVVQLAKRQGKTPIVVADKAGFYVNRILAPYINEAMRLLVEGEPIEV 491
Query: 515 IDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGK 572
ID+A+ FG P+GP QLLD G + AF +R F P ++D +LK R G+
Sbjct: 492 IDNALVKFGFPVGPIQLLDEVGIDTGTKIIPVLESAFGER-FSPPANIIDAILKDDRKGR 550
Query: 573 ANGKGLYTYE---KGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVV 629
N +G Y YE + SK +PDP+V P++ R S + +++ E + ++
Sbjct: 551 KNNRGFYLYETKGRKSKKRPDPAVYPLLGIGRPQSRLY---------AQQVAERCVMMML 601
Query: 630 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 689
NE+ R +E I+ A D D +V G+ FP + GG + D +GA V L++ + +G
Sbjct: 602 NEAARCFDEQIIRSARDGDIGAVFGIGFPPFLGGPFRYMDTIGAGEVAAILQRLAAQFGP 661
Query: 690 FFKPSRFLEERATKG 704
F P L A +G
Sbjct: 662 RFTPCDTLLRMAEQG 676
>gi|283832235|ref|ZP_06351976.1| fatty oxidation complex, alpha subunit FadJ [Citrobacter youngae
ATCC 29220]
gi|291071876|gb|EFE09985.1| fatty oxidation complex, alpha subunit FadJ [Citrobacter youngae
ATCC 29220]
Length = 714
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 225/713 (31%), Positives = 364/713 (51%), Gaps = 33/713 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D VA++T+ P +N L + ++ ++ ++ +V ++ F
Sbjct: 8 TLNVRLDNVAVVTIDVPGEKMNTLKAEFASQVRAILKQIRDNKALRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ + + +++ I P++AA+ G LGGGLE+A+ CH R
Sbjct: 68 GADINMIGSCRSTQEAETLARQGQQIMAE-IHALPIPVIAAIHGACLGGGLEMALACHNR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
I KT LGLPE+ LG++PG TQRLPRL+G+S A++M+L K + +++ K GL+D
Sbjct: 127 ICTDDAKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALDMILTGKQLRAKQALKAGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + R+L +++ G L A ++ A+KT
Sbjct: 187 EVVPQSILLEA----AVELAKKDSSTHRTLPVRERVLAGPLGRALLFRMASKKTAQKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+VIE G+ G SG EA+ F EL M S+ L H+FFA K P +
Sbjct: 243 NYPATERILEVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRHIFFANTDVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D+ P + G G TA + V +K++N++ + +K + V
Sbjct: 302 DVQPGPLNRVGILGGGLMGGGIAYVTA-CKGGLPVRIKDINAKGINHALKYSWDQLETKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R + + + L ++ G DY F D+VIEAV E + LKQ++ +E+E+ C PH I
Sbjct: 361 RRRHIKASERDKQLALISGSTDYRGFAHRDLVIEAVFEDLALKQQMVAEVEQHCAPHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + ++++G HFFSP MPL+E++ TS Q I + + K
Sbjct: 421 ASNTSSLPIGDIAANAARPEQVVGLHFFSPVEKMPLVEVIPHAATSEQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVETIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVASILNDDRKGRKNGRGFYLYGAKGRKSKKQVDP 599
Query: 592 SVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDAS 651
++ +I + G+ +T ++ E + ++NE+ R +E +V A D D +
Sbjct: 600 AIYTLI-------GVQGQGR---LTAVQVAERCVMLMLNEAARCFDEKVVRSARDGDIGA 649
Query: 652 VLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
V G+ FP + GG + D++GA V +L++ + YG+ F P L + A +G
Sbjct: 650 VFGIGFPPFLGGPFRYMDSLGAGEVVATLQRLTAQYGSRFTPCEQLLQMAERG 702
>gi|389840139|ref|YP_006342223.1| multifunctional fatty acid oxidation complex subunit alpha
[Cronobacter sakazakii ES15]
gi|387850615|gb|AFJ98712.1| multifunctional fatty acid oxidation complex subunit alpha
[Cronobacter sakazakii ES15]
Length = 717
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 237/714 (33%), Positives = 364/714 (50%), Gaps = 35/714 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
+++ D VA++T+ P +N L ++ + D+ +V ++ F
Sbjct: 8 NLQMRPDNVAVVTIDVPGEKMNTLKAEFARDVRAIVKTLRENRDLAGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +++ I +VAA+ G LGGGLELA+ CH+R
Sbjct: 68 GADINMIAHCQSAQEAEALASQGQQIMAE-IHALPVHVVAAIHGACLGGGLELALACHSR 126
Query: 124 IAAP--KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
I KT LGLPE+ LG++PG TQRLPRLVG+S A+EM+L K + + K GL+D
Sbjct: 127 ICTDDVKTLLGLPEVQLGLLPGSGGTQRLPRLVGISTALEMILAGKQLRPRQALKAGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A ++A +R+P R L ++L G + A + + +KT
Sbjct: 187 DVVPQSILLEA----AAELAKKRRPAPRRLPVRERLLAGPIGRALLFRMVTQKTHQKTHG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P Q +DV+ G+ G SG EA+ F EL M S L +FFA T+++ T
Sbjct: 243 NYPAAQRIIDVVRTGLEQGSASGYQAEARAFGELAMTPESAALRGLFFA---TTELKKET 299
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEANVRGL 355
PR + V V+GGGLMG GIA + V +K+++ + + +K +
Sbjct: 300 GSEAAPRALHSVGVLGGGLMGGGIAYVTATKARLPVRIKDISEKGINHALKYSWDLLEKK 359
Query: 356 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCI 415
V R L + + + ++ DY F D+V+EAV E + LKQK+ +E+E PH I
Sbjct: 360 VRRRHLRASERDAQMALISASTDYRGFHQRDIVVEAVFEDLTLKQKMVAEIEAHTAPHTI 419
Query: 416 LATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKI 475
A+NTS++ + + + +++IG H+FSP MPL+E++ TSA+ I + + K
Sbjct: 420 FASNTSSLPIGDIAAGAARPEQVIGLHYFSPVDKMPLVEVIPHAGTSAETIATTVQLAKK 479
Query: 476 IKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLA 535
K P+VV +C GF VNR PY A + G + +ID A+ G P+GP QLLD
Sbjct: 480 QGKTPIVVADCAGFYVNRILAPYINEAMRCLMEGESIEKIDEALVKRGFPVGPIQLLDEV 539
Query: 536 GYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTYE---KGSKPKPD 590
G V ++A+ R F +P V +L R G+ NG+G Y Y + SK + D
Sbjct: 540 GIDVGTKIMPVLERAYGPR-FSAPGDAVAAILNDDRKGRKNGRGFYLYPAKGRKSKKQVD 598
Query: 591 PSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDA 650
P+V +I + PGGK ++ +EI E + ++NE+ R L+EG+V A D D
Sbjct: 599 PAVYGLI-------GVKPGGK---LSGEEIAERCVMMMLNEAARCLDEGVVRSARDGDIG 648
Query: 651 SVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D +GA V T+L + + YG+ F P L A G
Sbjct: 649 AVFGIGFPPFLGGPFRYMDTLGAAAVATTLTRLATRYGDRFTPCDRLLRMAQTG 702
>gi|421845948|ref|ZP_16279099.1| multifunctional fatty acid oxidation complex subunit alpha
[Citrobacter freundii ATCC 8090 = MTCC 1658]
gi|411772717|gb|EKS56312.1| multifunctional fatty acid oxidation complex subunit alpha
[Citrobacter freundii ATCC 8090 = MTCC 1658]
Length = 715
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 223/710 (31%), Positives = 364/710 (51%), Gaps = 33/710 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ + D VA++T+ P +N L + ++ ++ ++ +V ++ F
Sbjct: 8 TLNLRLDNVAVVTIDVPGEKMNTLKAEFASQVRAILKQIRDNKALRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +++ I P++AA+ G LGGGLE+A+ CH R
Sbjct: 68 GADINMIGSCRSAQEAETLARQGQQMMAE-INALPIPVIAAIHGACLGGGLEMALACHNR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
I KT LGLPE+ LG++PG TQRLPRL+G+S A++M+L K + +++ K+GL+D
Sbjct: 127 ICTDDAKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALDMILTGKQLRAKQALKVGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + R+L +++ G L A ++ A+KT
Sbjct: 187 EVVPHSILLEA----AVELAKKDSSAQRTLPVRERVLAGPLGRALLFRMASKKTAQKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+VIE G+ G SG EA+ F EL M S+ L H+FFA K P +
Sbjct: 243 NYPATERILEVIETGLAQGSSSGYDAEARAFGELAMTSQSQALRHIFFANTDVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P V G G TA + V +K++N++ + +K + V
Sbjct: 302 DAKPGPLNSVGVLGGGLMGGGIAYVTA-CKGGLPVRIKDINAKGINHALKYSWDQLETKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R + + + L ++ G +DY F D++IEAV E + LKQ++ +E+E+ C PH +
Sbjct: 361 RRRHIKASERDKQLALISGSIDYRGFAHRDLIIEAVFEDLSLKQRMVAEVEQNCAPHTVF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+E++ TS Q I + + K
Sbjct: 421 ASNTSSLPIGDIAANATRPEQVIGLHFFSPVEKMPLVEVIPHATTSEQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVETIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY---EKGSKPKPDP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y + SK + DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVASILNDDRKGRKNGRGFYLYGVKGRKSKKQVDP 599
Query: 592 SVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDAS 651
++ +I + G+ +T ++ E + ++NE+ R +E IV A D D +
Sbjct: 600 AIYTLI-------GVQGQGR---LTAAQVAERCVMLMLNEAARCFDEKIVRSARDGDIGA 649
Query: 652 VLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERA 701
V G+ FP + GG + D++GA V +L++ + YG+ F P L + A
Sbjct: 650 VFGIGFPPFLGGPFRYMDSLGAGEVVATLQRLTTQYGSRFAPCEQLLQMA 699
>gi|423104122|ref|ZP_17091824.1| fatty acid oxidation complex subunit alpha [Klebsiella oxytoca
10-5242]
gi|376385764|gb|EHS98485.1| fatty acid oxidation complex subunit alpha [Klebsiella oxytoca
10-5242]
Length = 714
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 226/715 (31%), Positives = 356/715 (49%), Gaps = 38/715 (5%)
Query: 8 MEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVK-AIVLTGNGGRFSGG 64
+EV D +A+IT+ P +N L + ++ + +++ A+ ++ F G
Sbjct: 9 LEVRPDNIAVITIDAPGEKMNTLKAEFASEVRGIIRQIRDNKELRGAVFISAKADNFIAG 68
Query: 65 FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
DIN+ + H A + + +++ I P++AA+ G LGGGLELA+ CH R+
Sbjct: 69 ADINMIARCHSAEEAEALARQGQQIMAE-IHGLSIPVIAAIHGACLGGGLELALACHGRV 127
Query: 125 AAP--KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDA 179
+ KT+LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + + K GL+D
Sbjct: 128 CSDDDKTRLGLPEVQLGLLPGSGGTQRLPRLIGVSGALEMILTGKQLRPRQALKAGLVDE 187
Query: 180 VVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPN 237
VV LL+ A+++A + +P R++ +++ G L + +A+ KT N
Sbjct: 188 VVPQTILLQT----AIELALKGRPASRTVPARERILAGPLGRSLLFRLVAKKTHHKTQGN 243
Query: 238 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 297
P + L VIE G+ G SG +EA+ F EL M S+ L +FFA K D
Sbjct: 244 YPATERILQVIETGLAQGCSSGYAEEARAFGELAMTPQSQALRSIFFASTDLKK-----D 298
Query: 298 IGLKPRGVRKVAVIGGGLMGSGIATAHIL---NNIYVVLKEVNSEYLLKGIKTIEANVRG 354
G V +V G G A++ + V +K++ + +K +
Sbjct: 299 RGADAEPVALRSVGILGGGLMGGGIAYVTACKGGLPVRIKDIQPRGINHALKYSWDLLDK 358
Query: 355 LVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHC 414
V R L + + ++ G LDY F D+VIEAV E + LKQK+ SE+E+ C P
Sbjct: 359 QVRRRYLRASERERQMGLISGSLDYQGFAHRDVVIEAVFEDLALKQKMVSEVEQYCSPET 418
Query: 415 ILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGK 474
I A+NTS++ + + S R+IG HFFSP MPL+E++ T Q I + + K
Sbjct: 419 IFASNTSSLPIGEIAAHASRPQRVIGLHFFSPVDKMPLVEVIPHSGTDRQTIATAVKLAK 478
Query: 475 IIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDL 534
+ K P+VV + GF VNR PY A L+ G V ID+A+ FG P+GP QLLD
Sbjct: 479 LQGKTPIVVADKAGFYVNRILAPYINEAMRLLMEGEPVEHIDNALVKFGFPVGPIQLLDE 538
Query: 535 AGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTYE---KGSKPKP 589
G + A+ +R F P ++ +L R G+ N +G Y Y + SK +P
Sbjct: 539 VGIDTGTKIIPVLEAAWGER-FSPPANIISSILNDDRKGRKNNRGFYLYAAKGRKSKKRP 597
Query: 590 DPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
DP++ + L P + ++ +++ E + ++NE+ R +E +V A D D
Sbjct: 598 DPAIYTL------LGISSPQAR---LSAQQVAERCMMMMLNEAARCFDERVVRSARDGDI 648
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D +GA V L++ + YG F P L A +G
Sbjct: 649 GAVFGIGFPPFLGGPFRYMDTLGAGEVAAILQRLAVQYGPRFTPCDTLLHMAEQG 703
>gi|297172764|gb|ADI23729.1| 3-hydroxyacyl-CoA dehydrogenase [uncultured Rhodospirillales
bacterium HF4000_38H21]
Length = 651
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 233/672 (34%), Positives = 354/672 (52%), Gaps = 39/672 (5%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
V + ND +A IT+ NPP+NA + + G+ D +E +K ++L G F G
Sbjct: 4 VNLTTEND-IAFITIDNPPINATSHSVRQGIVDALDEIEGDSSIKVVILICAGKTFIAGA 62
Query: 66 DINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA 125
D++ F + ++PDV + +E KP++AA+ G ALGGGLE+A+GCH RIA
Sbjct: 63 DVSEFGQ---PPKDPILPDV-----IKRLEATIKPVIAAIHGHALGGGLEIALGCHYRIA 114
Query: 126 APKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 182
+LGLPE+ LG+IPG T RLPRLV + AI M+ K +++++ +GLIDA+ T
Sbjct: 115 ESGAKLGLPEVNLGLIPGAGGTVRLPRLVPVRDAIAMITGGKPVSADKANAIGLIDAI-T 173
Query: 183 SEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQ 242
L + +A I R +P L R + + + + +A + K P
Sbjct: 174 HGPLRDAALDFARTIINRPRPL--ELRRCPPVDAPDDHQWDEIIAGVGKKARGQIAPVIA 231
Query: 243 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 302
A I GI +G++ E + F EL D S+ L H+FFA+R+ +K+P + G P
Sbjct: 232 A--QAIRIGIEQDTAAGLVHEREKFVELRDSDQSKALRHIFFAERSVAKLPELD--GAAP 287
Query: 303 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 362
+ +V VIGGG+MG+GIATA +L + E N E G T++ ++ G + RG +T
Sbjct: 288 NPINEVGVIGGGIMGAGIATASLLAGFKATIIERNEEACTHGRATVKKHLSGSLKRGLIT 347
Query: 363 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 422
QD+ N+ L L DY++ D+V+EAV E + +K +F +L K C P +LA+NTS
Sbjct: 348 QDRFNDLLASLSTSTDYADLGTADLVVEAVFEDMAVKHDVFGKLSKHCKPDAVLASNTSY 407
Query: 423 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 482
+D+N + + R+IG HFFSPAH+M LLE+VRT++ +A + + + K+ V
Sbjct: 408 LDINEIAANCTHPQRVIGLHFFSPAHIMKLLEVVRTDQANATSLATAFAFARKLGKIAVP 467
Query: 483 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAA 542
G C GF NR Y + ++ G +ID+A+ FG P+G F + D+AG ++ A
Sbjct: 468 CGVCDGFIGNRIMSAYRKHCEYMLEDGALPHQIDAAMVEFGFPMGLFAMQDMAGLEISWA 527
Query: 543 TSKEFDKAFPDRSFQSP------LVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSV--L 594
T K F+ P L D L + R GK NG G Y Y++ K PDP V L
Sbjct: 528 TRKRL------APFRDPAERYVALGDYLCEMDRFGKKNGLGWYRYDENGKALPDPDVDAL 581
Query: 595 PIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLG 654
I E ++ G KEI+ +IL + +E ++L EGI + +D V G
Sbjct: 582 VIAESDKK------GITRRDFDAKEIISVILDAMRSEGDKILAEGIAMGPDAIDVVMVNG 635
Query: 655 MSFPSYRGGIVF 666
FP ++GG +F
Sbjct: 636 YGFPRHKGGPMF 647
>gi|401678085|ref|ZP_10810055.1| multifunctional fatty acid oxidation complex subunit alpha
[Enterobacter sp. SST3]
gi|400214693|gb|EJO45609.1| multifunctional fatty acid oxidation complex subunit alpha
[Enterobacter sp. SST3]
Length = 715
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 240/708 (33%), Positives = 363/708 (51%), Gaps = 35/708 (4%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA+IT+ P +N L ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVITIDVPDEKMNTLKAEFGVQVRAMLKQIRENKAIRGLVFISAKPDNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA--P 127
+ A + + + V++ I P++AA+ G LGGGLELA+ CH+RI
Sbjct: 74 IARAQSALEAEELARQG-QQVMSEINSLPIPVIAAIHGACLGGGLELALACHSRICTDDA 132
Query: 128 KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 184
KT LGLPE+ LG++PG TQRLPRLVG+S A+EM+L K + + + K GL+D VV
Sbjct: 133 KTILGLPEVQLGLLPGSGGTQRLPRLVGVSTALEMILTGKQLRARQALKAGLVDDVVPQS 192
Query: 185 ELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVL--KLARLQAKKTAPNMPQHQ 242
LL+ A+++A + + R L +++ + R +L + + +KT N P +
Sbjct: 193 ILLEA----AVELALKGRQAKRPLPVRERVLAGPLGRTLLFNMVGKKTEQKTKGNYPAAK 248
Query: 243 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 302
LDVIE G+ G SG EAK F EL M S+ L +FFA K P P
Sbjct: 249 RILDVIETGLSQGSSSGYAAEAKAFGELAMTPQSQALRSIFFASTEVKKDPGSE---ASP 305
Query: 303 RGVRKVAVIGGGLMGSGIA-TAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 361
+R + V+GGGLMG GIA + V +K++N + + ++ N+ V R +
Sbjct: 306 APLRAIGVLGGGLMGGGIAFVTASKGKLPVRIKDINPKGINHALQYSWQNLDQKVKRRHI 365
Query: 362 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 421
+ + L M+ G DYS F D+VIEAV E + LKQ++ +++E+ C PH I A+NTS
Sbjct: 366 KASERDKTLAMISGTTDYSGFAHRDLVIEAVFEDLALKQQMVADVEQHCAPHTIFASNTS 425
Query: 422 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 481
++ + + K + +++IG HFFSP MPL+E++ TS Q I ++ + K K P+
Sbjct: 426 SLSIGDIAAKAARPEQVIGLHFFSPVEKMPLVEVIPHATTSPQTIATVVKLAKKQGKTPI 485
Query: 482 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAA 541
VV + GF VNR PY A L++ G + +D A+ FG P+GP QLLD G
Sbjct: 486 VVADKAGFYVNRILAPYINEAMRLLTEGEKIEHVDEALVKFGFPVGPIQLLDEVGIDTGT 545
Query: 542 ATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DPSVLPI 596
+ A+ DR F P +V +LK R G+ N +G Y Y KG K K DPSV +
Sbjct: 546 KIIPVLEAAYGDR-FSPPANIVSAILKDDRKGRKNERGFYLYGAKGRKSKKQVDPSVYGL 604
Query: 597 IEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMS 656
I + GK +V E M++ +NE+ R E ++ A D D +V G+
Sbjct: 605 ISTTGQ-------GKLSAVQCAERCVMMM---LNEAARCFGEQVIKSARDGDIGAVFGIG 654
Query: 657 FPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
FP + GG + D +GA V L+ + YG F P L + A +G
Sbjct: 655 FPPFLGGPFRYMDTLGAGEVVAILQHLASQYGPRFTPCDELLQMAERG 702
>gi|418856693|ref|ZP_13411335.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 19593]
gi|392819202|gb|EJA75075.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 19593]
Length = 715
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 228/702 (32%), Positives = 357/702 (50%), Gaps = 37/702 (5%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 74 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 132
Query: 128 KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 184
KT LGLPE+ LG++PG TQRLPRLVG+S A++M+L K + + E K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRAREALKAGLVDDVVPQT 192
Query: 185 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 242
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 193 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 248
Query: 243 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 302
+DVIE G+ G SG EA+ F EL M S+ L VFFA K P +D P
Sbjct: 249 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAVFFASTEVKKDPG-SDAPPGP 307
Query: 303 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 362
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 308 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 366
Query: 363 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 422
+ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 367 ASERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCATHTIFASNTSS 426
Query: 423 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 482
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 427 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 486
Query: 483 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAA 542
V + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 487 VSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVGIDTGTK 546
Query: 543 TSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DPSVLPII 597
+ A+ +R F +P +V +L R G+ NG+G Y Y EKG K K DP++ +I
Sbjct: 547 IIPVLEAAYGER-FSAPANVVASILNDDRKGRKNGRGFYLYGEKGRKSKKQVDPAIYKLI 605
Query: 598 --EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGM 655
+ RLS +++ E + ++NE+ R +E ++ A D D +V G+
Sbjct: 606 GVQGQSRLS------------AQQVAERCVMLMLNEAARCFDEKVIRSARDGDIGAVFGI 653
Query: 656 SFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 697
FP + GG + DA+G + +L++ + LYG + P L
Sbjct: 654 GFPPFLGGPFRYMDALGPGEMVATLQRLAALYGPRYAPCEQL 695
>gi|330503668|ref|YP_004380537.1| 3-hydroxyacyl-CoA dehydrogenase [Pseudomonas mendocina NK-01]
gi|328917954|gb|AEB58785.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein [Pseudomonas
mendocina NK-01]
Length = 693
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 221/685 (32%), Positives = 350/685 (51%), Gaps = 38/685 (5%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A+ITL NPPVN+ + G+ + R +A++LTG G G D+ +++
Sbjct: 18 IAVITLDNPPVNSSTDAVRRGILQALA-SLDRARARAVLLTGAGRNLMAGADL---RELE 73
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
+P V+ L E C P++A ++G LGGGLELA+ C AR+A LGLP
Sbjct: 74 NEPTEPTLPQVTAAL-----EACPLPVIALIKGHTLGGGLELALACDARLATATANLGLP 128
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE------- 184
E+T+G+IPG TQRLPR VGL A+EM++ K I + + +LGL+D ++++
Sbjct: 129 EVTVGIIPGAGGTQRLPRAVGLGTALEMIVSGKPIKAAKALELGLVDHLLSASDEAEQQA 188
Query: 185 ELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 244
E L +R + +R R + DK + A++++ AR A
Sbjct: 189 EALAFARQYK---GGKRPLSARPVAAEDKAALRTRAQKLIAAARGLPAAAVAAEVVLAAD 245
Query: 245 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRG 304
+ I KE F L ++ L ++FFA+RA +P + R
Sbjct: 246 EMSFAQAIG--------KERAAFLALRGSQPAQALRYLFFAERAEPYIPAQPT---EARM 294
Query: 305 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 364
+ +VAVIG G MGSGIA + V L E+N++ L G+K IE + V R +L+ D
Sbjct: 295 LERVAVIGAGTMGSGIALCALQAGCTVDLLELNAQALAAGVKRIEDELARDVERQRLSAD 354
Query: 365 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 424
K + L L D D+VIEA+IE + KQ +F +L +LATNTS +D
Sbjct: 355 KRDAILARLTASQDIQTVAKADLVIEAIIEDMAAKQALFQQLAAQVSSDTLLATNTSYLD 414
Query: 425 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 484
++ + E S +R++G HFFSPAH M LLE+VR T Q + + + +KK +VVG
Sbjct: 415 IDAIAEGISHPERVLGLHFFSPAHRMALLEVVRGRSTGEQALCAALKCAERLKKKAIVVG 474
Query: 485 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATS 544
N GF NR + Y + ++ G +ID+A+ +G +GPF++ D++G +A
Sbjct: 475 NAWGFVGNRLYAAYRRQCEFMLEEGASPEQIDAALEQYGFAMGPFKVADMSGLDIAWRMR 534
Query: 545 KEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLS 604
++ R + + DLL ++GR G+ KG Y Y + +KP+ D +V II RR
Sbjct: 535 QQTAATRHLRRYVG-IPDLLCEAGRLGRKTAKGYYRYGEDNKPQTDSAVAEIIAGYRREQ 593
Query: 605 NIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGI 664
I + +++EI + + ++NE+ +L +G+ R D+D A V G FP +RGG
Sbjct: 594 GI----DARAFSDEEIQQRAVLALINEALLLLAQGVCQRPEDIDIALVHGYGFPRWRGGP 649
Query: 665 VFWADAVGANYVYTSLKKWSQLYGN 689
VF A ++G++ + +L + + G
Sbjct: 650 VFIARSMGSSELNAALDGFVEASGK 674
>gi|224587261|gb|ACN58629.1| Trifunctional enzyme subunit alpha, mitochondrial precursor [Salmo
salar]
Length = 758
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 231/731 (31%), Positives = 374/731 (51%), Gaps = 44/731 (6%)
Query: 2 AAPRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVK-AIVLTGNG 58
A V EV D VA+I + +P VN L++ + + + F E + D V+ A++++
Sbjct: 32 ARTHVNYEVKED-VAVIRMNDPNSKVNTLSVRMQNEMIEVFNEVLANDAVQSAVLISSKP 90
Query: 59 GRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAM 118
G F G DIN+ Q + A +V+ + ++ IE KPIVAA+ G LGGGLE A+
Sbjct: 91 GCFIAGADINMIQACNTAEEVTKLSQEGQKMF-ERIEKSSKPIVAAINGSCLGGGLEFAI 149
Query: 119 GCHARIA--APKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWK 173
C R+A + KT LG PE+ LG++PG TQRLP++VG+ A +MML ++I +++ K
Sbjct: 150 ACQYRVATKSKKTVLGTPEVMLGLLPGAGGTQRLPKMVGIPGAFDMMLTGRNIKADKAKK 209
Query: 174 LGLIDAVV-------TSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREV--- 223
+GL+ +V S E + L + I R + + T K G + + ++
Sbjct: 210 MGLVHQLVDPLGPGLKSPEERTIEYLEEVAIQCARGIVHKKILLTKKKGMMQKVQDYVMG 269
Query: 224 LKLARLQAKKTAPN---------MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLD 274
++ R Q K P ++ ++ G+ G SG L EA+ F +L M
Sbjct: 270 IQFVRQQIYKNVTGKVMKMSKGLYPAPLKIIESVKSGLEQGPDSGYLAEAQNFGKLAMTS 329
Query: 275 TSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLK 334
S L+ ++ Q A K G+ R V+ +A++G GLMG+GIA + I+ VLK
Sbjct: 330 ESNALIGLYHGQVACKK----NRFGVPERPVKNLAILGAGLMGAGIAQVTVDKGIHTVLK 385
Query: 335 EVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIE 394
+ E L +G + + + + + +T + ++ L L G LDYS F+ DMVIEAV E
Sbjct: 386 DTTVEGLSRGQQQVYKGLNDKIKKKAITSFERDSTLSSLTGQLDYSGFEKADMVIEAVFE 445
Query: 395 SVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLE 454
+ +K ++ E+E PPHCI ATNTS + + + + +++IG H+FSP M LLE
Sbjct: 446 DINIKHRVIKEVEAVIPPHCIFATNTSALPIKDIAAASMRPEKVIGMHYFSPVDKMQLLE 505
Query: 455 IVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFR 514
I+ T++TS + VG KV +VVG+ GF R P A ++ G+ +
Sbjct: 506 IITTDKTSKDTTASAVAVGLKQGKVIIVVGDGPGFYTTRCLAPMLAEAVRVLQEGISPKK 565
Query: 515 IDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLL---LKSGRNG 571
+D+ FG P+G L D G VAA +++ KAF R F V++L ++ G G
Sbjct: 566 LDALTTGFGFPVGAATLADEVGIDVAAHVAEDLGKAFGSR-FGGGNVEVLKTMVERGFKG 624
Query: 572 KANGKGLYTYEKGSKPKP-DPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVN 630
+ +GKG Y Y G K K +P + ++E+ + N P ++ +I ++ VN
Sbjct: 625 RKSGKGCYVYTPGLKSKDVNPDIDDLLEKFKLTPN------PSVSSDSDIQYRLVSRFVN 678
Query: 631 ESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF 690
E+ L+EGI+ + D +V G+ FP GG + D GA+ + ++++ ++YGN
Sbjct: 679 EAVMCLQEGILNGPVEGDIGAVFGLGFPPCLGGPFRFVDTFGADKLVEKMRRYEEVYGNH 738
Query: 691 FKPSRFLEERA 701
F P + L + A
Sbjct: 739 FTPCQLLLDHA 749
>gi|198244761|ref|YP_002216460.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Dublin str.
CT_02021853]
gi|445147226|ref|ZP_21387982.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Dublin str.
SL1438]
gi|254788649|sp|B5FPN1.1|FADJ_SALDC RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|197939277|gb|ACH76610.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
subsp. enterica serovar Dublin str. CT_02021853]
gi|444844769|gb|ELX69995.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Dublin str.
SL1438]
Length = 715
Score = 333 bits (855), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 228/708 (32%), Positives = 360/708 (50%), Gaps = 37/708 (5%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 74 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 132
Query: 128 KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 184
KT LGLPE+ LG++PG TQRLPRLVG+S A++M+L K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDVVPQT 192
Query: 185 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 242
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 193 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 248
Query: 243 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 302
+DVIE G+ G SG EA+ F EL M S+ L VFFA K P +D P
Sbjct: 249 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAVFFASTEVKKDPG-SDAPPGP 307
Query: 303 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 362
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 308 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 366
Query: 363 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 422
++ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 367 ANERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCAAHTIFASNTSS 426
Query: 423 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 482
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 427 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 486
Query: 483 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAA 542
V + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 487 VSDKAGFYVNRILVPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVGIDTGTK 546
Query: 543 TSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DPSVLPII 597
+ A+ +R F +P +V +L R G+ NG+G Y Y EKG K K DP++ +I
Sbjct: 547 IIPVLEAAYGER-FSAPANVVASILNDDRKGRKNGRGFYLYGEKGRKSKKQVDPAIYKLI 605
Query: 598 --EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGM 655
+ RLS +++ E + ++NE+ R +E ++ A D D +V G+
Sbjct: 606 GVQGQSRLS------------AQQVAERCVMLMLNEAARCFDEKVIRSARDGDIGAVFGI 653
Query: 656 SFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATK 703
FP + GG + DA+G + +L++ + LYG + P L A +
Sbjct: 654 GFPPFLGGPFRYMDALGPGEMVATLQRLAALYGPRYAPCEQLVRMAER 701
>gi|343503751|ref|ZP_08741559.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
ichthyoenteri ATCC 700023]
gi|342814139|gb|EGU49090.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
ichthyoenteri ATCC 700023]
Length = 704
Score = 333 bits (855), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 227/713 (31%), Positives = 361/713 (50%), Gaps = 30/713 (4%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKA--IVLTGNG 58
+ A +T++ N I + N +N L ++ F E I+ +G
Sbjct: 4 LKAFNLTIDEQNVAWLCIDVPNEKMNTLQAAFAEEMEQVFAELEQHKGALQGLIIHSGKP 63
Query: 59 GRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAM 118
F G D+ + A + + E+ N + P+VAA+ G LGGGLELA+
Sbjct: 64 DNFVAGADVRMLDACQNAQEAQALAAKGQEMF-NKLSSLAFPVVAAIHGPCLGGGLELAL 122
Query: 119 GCHARIAAP--KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWK 173
C R+ + KT++GLPE+ LG++PG TQRLPRL+GL A++MML K + +++ K
Sbjct: 123 ACDYRVCSDDDKTRIGLPEVQLGLLPGSGGTQRLPRLIGLLPALDMMLTGKQLRAKKAHK 182
Query: 174 LGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVL--KLARLQA 231
LG++DA V LL V++ + + K + + + R+V+ + A+
Sbjct: 183 LGVVDACVPLSILLDVAKQL---VEKKDKAKHKVTAKEKLMAQTGFGRKVIFEQAAKKTQ 239
Query: 232 KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 291
+KT N P +A L VI G+ HG G+ EA+ F ELVM D S+ L +FFA T++
Sbjct: 240 QKTRGNYPATEAILAVIRHGLEHGLEKGLAYEAERFGELVMTDQSKALRSIFFA---TTE 296
Query: 292 VPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEA 350
+ KP V++VAV+GGGLMG+GI+ + + +K+V+++ +L +
Sbjct: 297 MKKEHGSDAKPVQVKRVAVLGGGLMGAGISHVTVAKAKLPARIKDVSNDGVLNALNYNFK 356
Query: 351 NVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKAC 410
R L++ + ++ L G D+ F D+VIEAV E + LKQ++ +E+E
Sbjct: 357 LFEKQRKRRILSKAQLQAKMQQLSGGTDFVSFNHTDVVIEAVFEDLALKQQMVAEVETNA 416
Query: 411 PPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLM 470
I ATNTS++ ++ + E+ + + +IG H+FSP MPL+E++ TS + I ++
Sbjct: 417 KSSTIFATNTSSLPIHQIAEQAARPENVIGLHYFSPVEKMPLVEVIPHHTTSDETISTVV 476
Query: 471 TVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 530
+ + K P+VV + GF VNR PY A ++ G + ++D A+ G P+GP
Sbjct: 477 ELARKQGKTPIVVQDKAGFYVNRILAPYMNEAANILLTGEPIEQLDDALLDAGFPVGPIT 536
Query: 531 LLDLAGYGVAAATSKEFDKAFPDRSFQSPLV-DLLLKSGRNGKANGKGLYTYEKGSKPKP 589
LLD G + A R FQ P V D LL GR G+ +GKG YTY KG +
Sbjct: 537 LLDEVGVDIGAKIMPILVSELGPR-FQGPAVFDTLLNDGRKGRKSGKGFYTY-KGKDKQV 594
Query: 590 DPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
D SV +L N+ P K ++ KEI + P++NE+ R L+EGI+ D D
Sbjct: 595 DKSVY-------KLLNLTPESK---LSAKEIAMRCILPMLNEAVRCLDEGIIRSPRDGDI 644
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERAT 702
++ G+ FP + GG + D +G + + + + YG F P L RA+
Sbjct: 645 GAIFGIGFPPFLGGPFRYMDQIGVVKLVEIMNEHAAKYGERFAPCDGLLTRAS 697
>gi|423141010|ref|ZP_17128648.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
subsp. houtenae str. ATCC BAA-1581]
gi|379053564|gb|EHY71455.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
subsp. houtenae str. ATCC BAA-1581]
Length = 715
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 228/708 (32%), Positives = 362/708 (51%), Gaps = 37/708 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D VA++ + P VN L A ++ ++ + ++ +V ++ F
Sbjct: 8 TLNVRLDNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENNALQGVVFISAKADNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I+ P++AA+ G LGGGLE+A+ CH R
Sbjct: 68 GADINMIGHCQSAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRR 126
Query: 124 IAAP--KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
I KT LGLPE+ LG++PG TQRLPRLVG+S A++M+L K + + + K GL+D
Sbjct: 127 ICTDDVKTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + + R+L +++ G L A + + A+KT
Sbjct: 187 DVVPQTILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + +DVIE G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERIIDVIETGLAQGSSSGYDAEARAFGELAMTTQSQALRAIFFASTEVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++N++ + +K + V
Sbjct: 302 DAPPGPLNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R + + + L +L G DY F D+VIEAV E + LKQ++ +E+E+ C H I
Sbjct: 361 RRRHMKTSERDKQLALLSGSTDYRGFSHRDLVIEAVFEDLSLKQQMVAEVEQNCASHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ ++ + K + +++IG HFFSP MPL+E++ TSAQ I + + K
Sbjct: 421 ASNTSSLPISDIAAKAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKRQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVASILNDDRKGRKNGRGFYLYGKKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ +I + RLS +++ E + ++NE+ R +E ++ A D D
Sbjct: 600 AIYKLIGVQGQSRLS------------AQQVAERCVMLMLNEAARCFDEKVIRSARDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 697
+V G+ FP + GG + DA+G + +L++ + LYG + P L
Sbjct: 648 GAVFGIGFPPFLGGPFRYMDALGPGEMVATLQRLAALYGPRYAPCEQL 695
>gi|334704887|ref|ZP_08520753.1| multifunctional fatty acid oxidation complex subunit alpha
[Aeromonas caviae Ae398]
Length = 715
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 240/729 (32%), Positives = 372/729 (51%), Gaps = 45/729 (6%)
Query: 1 MAAPRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDD-VKAIVLTGN 57
M+A ++++ DG+ I+T+ P +N L ++ E D + ++++G
Sbjct: 1 MSAKTFSLDIRKDGIGILTMDVPGESMNTLKASFADEIRTLLAEVKGNGDLIGLVIVSGK 60
Query: 58 GGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELA 117
F G DI + A D + ++ IE P++AA+ G LGGGLELA
Sbjct: 61 KDSFVAGADIAMLAACTSAQDAEALSRAGQDVFAE-IETLGIPVIAAIHGPCLGGGLELA 119
Query: 118 MGCHARIAAP--KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGW 172
+ CH R+ KT LGLPE+ LG++PG TQRLPRL+G++KA+++ML K + +++
Sbjct: 120 LACHGRVVTDHGKTVLGLPEVQLGLLPGSGGTQRLPRLIGVAKALDLMLTGKQVRAKQAR 179
Query: 173 KLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSE----AREVL-KLA 227
KLGL+D +V LL+ A+ +A + KP R + D G + E R+VL A
Sbjct: 180 KLGLVDDMVPPSILLEA----AIKLAKKGKP--RHHLKRDLQGKVLETNKFGRKVLFDQA 233
Query: 228 RLQAK-KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQ 286
R K KT N P + ++V+ G+ G +G+L EA+ F ELVM S L +FFA
Sbjct: 234 RKGVKAKTRGNYPAPERIIEVVRIGVEEGMQAGLLAEARHFGELVMTPESAALRSLFFAT 293
Query: 287 RATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGI 345
K V+ G +PR V AV+GGGLMG GIA + V +K+V S + +
Sbjct: 294 TEMKK--EVSYQGAEPRKVGHAAVLGGGLMGGGIAFVTATKAGVPVRIKDVASAGIGNAM 351
Query: 346 KTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSE 405
+ + + R +L + + + +L G LDYS F VDMV+EAV E + LK ++ +
Sbjct: 352 RYSYDLLARKLKRRQLLRSELEKQMSLLTGTLDYSGFHRVDMVVEAVFEDINLKHQMVQD 411
Query: 406 LEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQV 465
+E+ C H + A+NTS++ ++ + + +R++G H+FSP MPL EI+ TSA+
Sbjct: 412 VERECGEHTVFASNTSSLPIHQIASAATHPERVVGLHYFSPVDKMPLAEIIPHAGTSAET 471
Query: 466 ILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLP 525
+ + + K P+VV + GF VNR PY A LV G V +D A+ FG P
Sbjct: 472 VATTLAFARAQGKTPIVVKDEAGFYVNRILAPYMNEAARLVLEGEPVEVLDGALLDFGFP 531
Query: 526 IGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP-LVDLLLKSGRNGKANGKGLYTYEKG 584
+GP LLD G V A S +K FQ+P D LL+ R G+ NGKG Y Y K
Sbjct: 532 VGPITLLDEVGIDVGAKISPILEKELGGEQFQAPKAFDKLLEDDRKGRKNGKGFYLYGKA 591
Query: 585 S----------KPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCR 634
+ K D SV ++ + P K + +EI E + ++NE+
Sbjct: 592 APRNKLTGKEGKKTVDASVYDVL-------GVKPQAK---LARQEIAERCVLLMLNEAAM 641
Query: 635 VLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPS 694
L+ G+V A D D ++ G+ FP + GG + D++G +Y+ L+ + +G+ F P
Sbjct: 642 ALDGGVVASARDGDIGAIFGIGFPPFLGGPFRYMDSLGIDYLVGRLEHHQKRFGDRFAPC 701
Query: 695 RFLEERATK 703
L+ A +
Sbjct: 702 ARLKAMAAE 710
>gi|340028126|ref|ZP_08664189.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding [Paracoccus sp. TRP]
Length = 646
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 229/667 (34%), Positives = 341/667 (51%), Gaps = 33/667 (4%)
Query: 6 VTMEVGNDG-VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGG 64
+T+ + G +A++T+ NPPVNAL+ + GL D + +V+A+VL G F G
Sbjct: 1 MTVTIARQGEIAVVTVDNPPVNALSQALRQGLWDAVGTLDADPEVRAVVLICAGRTFIAG 60
Query: 65 FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
D+ F K +PD+ V+ IE KP VAA+ G ALGGG E+AMGC R+
Sbjct: 61 ADVTEFGKPP---QPPHLPDL-----VDRIEGAAKPWVAAIHGSALGGGFEVAMGCRFRV 112
Query: 125 AAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVV 181
A P +GLPE+TLG++PG T R PRL G A+E++ + + +++ GLIDAVV
Sbjct: 113 ALPDASVGLPEVTLGIVPGASGTVRTPRLAGAELAVELVTSGRPMRAQKAAVSGLIDAVV 172
Query: 182 TSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 241
T + LL + +A + R P S + A + +A+ AP
Sbjct: 173 TGD-LLDGAVGFAREALTRPLPAPVSARPVAAPDAAFWAEKEKSVAKAAKGAAAPLR--- 228
Query: 242 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 301
LD + + + + E F EL D + L HVFFA+R + + +
Sbjct: 229 --ALDCLRKAVEAPFPEAMAYERATFLELRGSDQAAALRHVFFAERTAPRPAALRAV--D 284
Query: 302 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 361
P +R+ AVIGGG MG+GIA A + VVL E + + + +GI + G V RG+L
Sbjct: 285 PLPLRRAAVIGGGTMGAGIAAALREAGLPVVLVERDDDAVARGIANLRGIFDGAVRRGRL 344
Query: 362 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 421
+A + + DY+ DVD+VIEAV E + +KQ +F +L + C +LATNTS
Sbjct: 345 GTAQAEELVSGVTATTDYAALADVDLVIEAVFEEIGVKQAVFEQLGRVCRADAVLATNTS 404
Query: 422 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 481
+D + +R IG HFFSPA+VM LLEIV TS QV+ + +++KK+PV
Sbjct: 405 YLDPRKIAAGVPGPERFIGLHFFSPANVMKLLEIVPVPETSEQVLATGFALARLLKKIPV 464
Query: 482 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAA 541
G C GF NR Y +A LV GV + ID+A+R++G +GPF+ DL G +A
Sbjct: 465 RAGICEGFIGNRILKRYRAAAEALVRQGVAIAEIDAAMRAYGFAMGPFEAQDLGGLDIAY 524
Query: 542 ATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECR 601
+ A D L D+L+++GR G+ G G Y Y G + KP PS
Sbjct: 525 LQREGARAAGQD--VPETLGDILVRAGRKGQKTGGGWYDYVPGDR-KPQPS--------S 573
Query: 602 RLSNIMPGG-KPISVTEKE-IVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPS 659
++ ++ G P++ E+ I ++ + E +L EGI +D+D + G FP
Sbjct: 574 TVTELLAGQIAPVATMERNAIAAHLVAEMAAEGQAILTEGIAQLPADIDLVEIHGYGFPR 633
Query: 660 YRGGIVF 666
+RGG +F
Sbjct: 634 WRGGPMF 640
>gi|398354818|ref|YP_006400282.1| fatty acid oxidation complex subunit alpha [Sinorhizobium fredii
USDA 257]
gi|390130144|gb|AFL53525.1| fatty acid oxidation complex subunit alpha [Sinorhizobium fredii
USDA 257]
Length = 686
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 235/696 (33%), Positives = 353/696 (50%), Gaps = 33/696 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A++T+ NPPVNAL+ + GL D E + VKA+VL G F G D+ F K
Sbjct: 11 IAVVTVNNPPVNALSQALRQGLFDAAEALDADRSVKAVVLACAGRTFIAGADVGEFGK-- 68
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
MP +LV IE KP +AA+ G ALGGG E+ +GC R+A +GLP
Sbjct: 69 -----PPMPPHLPDLVAR-IERAAKPWIAAIHGSALGGGFEVTLGCRFRVAVSSASVGLP 122
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 191
E+ LG++PG T RLPRL G+ A++M+ + + + + GLIDAV+ + +
Sbjct: 123 EVRLGIVPGAGGTVRLPRLAGVETAVDMVTTGTPVGARKAHEAGLIDAVIEDDLVAGAVA 182
Query: 192 LWALDIAARRKPWIRSLHRTDKLGSLSEA-REVLKLARLQAKKTAPNMPQHQACLDVIEE 250
+ +P +L R + +++E E K AC+ E
Sbjct: 183 FARAAL---DRPLPDAL-RDRPVAAVAEGFWEAAAKTVAARAKREEAPLSALACVRRAAE 238
Query: 251 GIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAV 310
+ + E + F L + L HVFFA+ A ++ P + G+ P +R AV
Sbjct: 239 VDFE---TAIAFERETFLALRGSAQAAALRHVFFAECAATRPPELA--GVTPWTIRSAAV 293
Query: 311 IGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNAL 370
IGGG MG+GIA A + V+L E + + +G+ + A RG+++ D A + +
Sbjct: 294 IGGGTMGAGIAAALRDAGLPVILVERDDGAVERGLANLRAIFHSAAKRGRISTDAAADRM 353
Query: 371 KMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGE 430
+ G DY+ DVD+VIEAV E + +K+ +F+ L AC + ILATNTS +D + E
Sbjct: 354 AGITGTTDYAALSDVDLVIEAVFEDLDVKRDVFARLAAACRDNAILATNTSYLDPERIAE 413
Query: 431 KTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFA 490
+R +G HFFSPA +M LLEI+ T ++ V+ + +++ K+PV G C GF
Sbjct: 414 GIRRPERFLGLHFFSPAQMMKLLEIIPTRASAPAVVAAGFALARMLNKIPVRAGICDGFI 473
Query: 491 VNRAF-FPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDK 549
NR +Q+ RLL+S G +D+A+R+FGLP+GPF+ DL G +AA K +
Sbjct: 474 GNRILKVTRAQAERLLLS-GATPPAVDAAMRAFGLPMGPFEAQDLGGLDIAAFQRKAA-R 531
Query: 550 AFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIMP 608
A + F +P+ D L R G+ +G G Y Y G + P+ +V II E + P
Sbjct: 532 ARGETPF-APIADRLCAIERFGQKSGGGWYDYAPGDRTPRLSETVASIIAE---EAKDWP 587
Query: 609 GGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWA 668
+P E I + IL P+VNE +L +G +RASD+D + G FP +RGG + +A
Sbjct: 588 --RP-DWDEDAIADCILLPMVNEGASILADGTALRASDIDLVKIHGYGFPRWRGGPMHYA 644
Query: 669 DAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
A G + V +L + G P L E A G
Sbjct: 645 QAQGLDKVVEALNALAT-EGLADPPCELLLEAARHG 679
>gi|261340726|ref|ZP_05968584.1| fatty oxidation complex, alpha subunit FadJ [Enterobacter
cancerogenus ATCC 35316]
gi|288317143|gb|EFC56081.1| fatty oxidation complex, alpha subunit FadJ [Enterobacter
cancerogenus ATCC 35316]
Length = 715
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 233/708 (32%), Positives = 355/708 (50%), Gaps = 35/708 (4%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA+IT+ P +N L +++ + ++ +V ++ F G DIN+
Sbjct: 14 DNVAVITIDVPDEKMNTLKAEFGVQVREMLKHVRENKALRGLVFISAKPDNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA--P 127
+ A + + +++ I P++AA+ G LGGGLELA+ CH+RI
Sbjct: 74 IARAQSAQEAEALARQGQQVMAE-IHALPIPVIAAIHGACLGGGLELALACHSRICTDDA 132
Query: 128 KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 184
KT LGLPE+ LG++PG TQRLPRLVG+S A+EM+L K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALEMILTGKQLRARQALKAGLVDEVVPQA 192
Query: 185 ELLKVSRLWALDIAARRKPW-IRSLHRTDKLGSLSEAREVL-KLA-RLQAKKTAPNMPQH 241
LL + AL ++P +R LG R VL KLA + +KT N P
Sbjct: 193 ILLDAAVERALKGRQAKRPLPVRERILAGPLG-----RAVLFKLAGKKTEQKTRGNYPAA 247
Query: 242 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 301
+ L+VIE G+ G SG EAK F EL M S+ L ++FFA K P +D
Sbjct: 248 KRILEVIETGLSQGASSGYAAEAKAFGELAMTPQSQALRNIFFASTEVKKDPG-SDAAPA 306
Query: 302 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 361
P V G G TA + V +K++N++ + ++ N+ V R +
Sbjct: 307 PLQAVGVLGGGLMGGGIAFVTAS-KGKLPVRIKDINAKGINHALQYSWQNLDRKVKRRHI 365
Query: 362 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 421
+ + L M+ G DYS F+ D+VIEAV E + LKQ++ +++E C PH I A+NTS
Sbjct: 366 KASERDKTLAMITGTTDYSGFRHRDLVIEAVFEDLALKQQMVADVEAHCAPHTIFASNTS 425
Query: 422 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 481
+I + + + +++IG HFFSP MPL+E++ T Q + ++ + K K P+
Sbjct: 426 SIPIGEIAANAARPEQVIGLHFFSPVEKMPLVEVIPHANTCPQTVATVVKLAKKQGKTPI 485
Query: 482 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAA 541
VV + GF VNR PY A L++ G + +D A+ +FG P+GP QLLD G
Sbjct: 486 VVADKAGFYVNRILAPYINEAMRLLTEGEKIEHVDEALVNFGFPVGPIQLLDEVGIDTGT 545
Query: 542 ATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTYE---KGSKPKPDPSVLPI 596
+ A+ DR F P +V +LK R G+ N +G Y Y + SK + DPSV +
Sbjct: 546 KIIPVLEAAYGDR-FSPPANIVSAILKDDRKGRKNERGFYLYAAKGRKSKKQVDPSVYGL 604
Query: 597 IEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMS 656
I + G+ ++ + E + ++NE+ R E +V A D D +V G+
Sbjct: 605 ITTTGQ-------GR---LSAAQCAERCVMMMLNEAARCFGEQVVKSARDGDIGAVFGIG 654
Query: 657 FPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
FP + GG + D +GA V L++ + YG F P L + A +G
Sbjct: 655 FPPFLGGPFRYMDTLGAGEVVAILQRLASQYGPRFTPCDELLQMAERG 702
>gi|375119946|ref|ZP_09765113.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
subsp. enterica serovar Dublin str. SD3246]
gi|326624213|gb|EGE30558.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
subsp. enterica serovar Dublin str. SD3246]
Length = 708
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 228/708 (32%), Positives = 360/708 (50%), Gaps = 37/708 (5%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+
Sbjct: 7 DNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINM 66
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 67 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 125
Query: 128 KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 184
KT LGLPE+ LG++PG TQRLPRLVG+S A++M+L K + + + K GL+D VV
Sbjct: 126 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDVVPQT 185
Query: 185 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 242
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 186 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 241
Query: 243 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 302
+DVIE G+ G SG EA+ F EL M S+ L VFFA K P +D P
Sbjct: 242 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAVFFASTEVKKDPG-SDAPPGP 300
Query: 303 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 362
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 301 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 359
Query: 363 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 422
++ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 360 ANERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCAAHTIFASNTSS 419
Query: 423 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 482
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 420 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 479
Query: 483 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAA 542
V + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 480 VSDKAGFYVNRILVPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVGIDTGTK 539
Query: 543 TSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DPSVLPII 597
+ A+ +R F +P +V +L R G+ NG+G Y Y EKG K K DP++ +I
Sbjct: 540 IIPVLEAAYGER-FSAPANVVASILNDDRKGRKNGRGFYLYGEKGRKSKKQVDPAIYKLI 598
Query: 598 --EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGM 655
+ RLS +++ E + ++NE+ R +E ++ A D D +V G+
Sbjct: 599 GVQGQSRLS------------AQQVAERCVMLMLNEAARCFDEKVIRSARDGDIGAVFGI 646
Query: 656 SFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATK 703
FP + GG + DA+G + +L++ + LYG + P L A +
Sbjct: 647 GFPPFLGGPFRYMDALGPGEMVATLQRLAALYGPRYAPCEQLVRMAER 694
>gi|260598754|ref|YP_003211325.1| multifunctional fatty acid oxidation complex subunit alpha
[Cronobacter turicensis z3032]
gi|260217931|emb|CBA32533.1| Fatty acid oxidation complex subunit alpha [Cronobacter turicensis
z3032]
Length = 717
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 240/719 (33%), Positives = 364/719 (50%), Gaps = 47/719 (6%)
Query: 8 MEVGNDGVAIITLINP--PVNALAI-------PIVAGLKDKFEEATSRDDVKAIVLTGNG 58
+++ D VA++T+ P +N L IV L+D +RD + ++
Sbjct: 9 LQMRPDNVAVVTIDVPGEKMNTLKAEFARDVRAIVKTLRD------NRDLAGVVFISAKP 62
Query: 59 GRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAM 118
F G DIN+ A + + +++ I +VAA+ G LGGGLELA+
Sbjct: 63 DNFIAGADINMIAHCQSAQEAEALASQGQQIMAE-IRALPVHVVAAIHGACLGGGLELAL 121
Query: 119 GCHARIAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWK 173
CH+RI KTQLGLPE+ LG++PG TQRLPRLVG+S A+EM+L K + + K
Sbjct: 122 ACHSRICTDDAKTQLGLPEVQLGLLPGSGGTQRLPRLVGVSTALEMILAGKQLRPRQALK 181
Query: 174 LGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQA 231
GL+D VV LL+ A ++A +R+P R L +++ G L A + +
Sbjct: 182 AGLVDDVVPQSILLEA----AAELAKKRRPAPRRLPVRERVLAGPLGRALLFRMVTQKTH 237
Query: 232 KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 291
+KT N P Q +DV+ G+ G SG EA+ F EL M S L +FFA T++
Sbjct: 238 QKTHGNYPAAQRIIDVVRTGLEQGSASGYQAEARAFGELAMTPESAALRGLFFA---TTE 294
Query: 292 VPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEA 350
+ T PR + V V+GGGLMG GIA + V +K+++ + + +K
Sbjct: 295 LKKETGSEAAPRALHSVGVLGGGLMGGGIAYVTATKARLPVRIKDISEKGINHALKYSWD 354
Query: 351 NVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKAC 410
+ V R L + + + ++ DY F D+V+EAV E + LKQ + +E+E
Sbjct: 355 LLEKKVRRRHLRASERDAQMALISASTDYRGFHQRDIVVEAVFEELTLKQNMVAEIEAHT 414
Query: 411 PPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLM 470
PH I A+NTS++ + + + +++IG H+FSP MPL+E++ TSA+ I +
Sbjct: 415 APHTIFASNTSSLPIGDIAAGAARPEQVIGLHYFSPVDKMPLVEVIPHAGTSAETIATTV 474
Query: 471 TVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 530
+ K K P+VV +C GF VNR PY A + G + +ID A+ G P+GP Q
Sbjct: 475 QLAKKQGKTPIVVADCAGFYVNRILAPYINEAMRCLMEGESIEKIDEALVKRGFPVGPIQ 534
Query: 531 LLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTYE---KGS 585
LLD G V ++A+ R F +P V +L R G+ NG+G Y Y + S
Sbjct: 535 LLDEVGIDVGTKIMPVLERAYGPR-FSAPGDAVAAILNDDRKGRKNGRGFYLYPAKGRKS 593
Query: 586 KPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRAS 645
+ DP+V +I + PGGK ++ +EI E + ++NE+ R L+EG+V A
Sbjct: 594 NKQADPAVYGLI-------GVKPGGK---LSGEEIAERCVMMMLNEAARCLDEGVVRSAR 643
Query: 646 DLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
D D +V G+ FP + GG + D +GA V +L + S YG+ F P L A G
Sbjct: 644 DGDIGAVFGIGFPPFLGGPFRYMDTLGAAAVVATLTRLSTRYGDRFTPCDRLLRMAQTG 702
>gi|168261585|ref|ZP_02683558.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
subsp. enterica serovar Hadar str. RI_05P066]
gi|207857806|ref|YP_002244457.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. P125109]
gi|421357402|ref|ZP_15807713.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 622731-39]
gi|421361562|ref|ZP_15811821.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 639016-6]
gi|421367372|ref|ZP_15817566.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 640631]
gi|421371287|ref|ZP_15821446.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 77-0424]
gi|421375602|ref|ZP_15825714.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 607307-6]
gi|421379493|ref|ZP_15829562.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 485549-17]
gi|421384525|ref|ZP_15834550.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 596866-22]
gi|421388385|ref|ZP_15838375.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 596866-70]
gi|421392829|ref|ZP_15842778.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 629164-26]
gi|421397633|ref|ZP_15847545.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 629164-37]
gi|421401870|ref|ZP_15851735.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 639672-46]
gi|421407133|ref|ZP_15856942.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 639672-50]
gi|421411417|ref|ZP_15861182.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 77-1427]
gi|421418486|ref|ZP_15868188.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 77-2659]
gi|421420001|ref|ZP_15869682.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 78-1757]
gi|421424426|ref|ZP_15874068.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 22510-1]
gi|421430437|ref|ZP_15880024.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 8b-1]
gi|421433937|ref|ZP_15883490.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 648905 5-18]
gi|421439478|ref|ZP_15888968.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 648901 6-18]
gi|421444251|ref|ZP_15893682.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 50-3079]
gi|421447340|ref|ZP_15896742.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 58-6482]
gi|436679304|ref|ZP_20517735.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. SE30663]
gi|436797418|ref|ZP_20523186.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CHS44]
gi|436808543|ref|ZP_20527967.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1882]
gi|436817281|ref|ZP_20534363.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1884]
gi|436830762|ref|ZP_20535504.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1594]
gi|436849301|ref|ZP_20540470.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1566]
gi|436856896|ref|ZP_20545818.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1580]
gi|436862485|ref|ZP_20549168.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1543]
gi|436872383|ref|ZP_20555405.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1441]
gi|436879939|ref|ZP_20559773.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1810]
gi|436889243|ref|ZP_20565164.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1558]
gi|436897169|ref|ZP_20569816.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1018]
gi|436901004|ref|ZP_20571928.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1010]
gi|436909539|ref|ZP_20576263.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1729]
gi|436917291|ref|ZP_20580825.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_0895]
gi|436923823|ref|ZP_20585192.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_0899]
gi|436933821|ref|ZP_20589976.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1457]
gi|436942205|ref|ZP_20595188.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1747]
gi|436948510|ref|ZP_20598723.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_0968]
gi|436957147|ref|ZP_20602815.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1444]
gi|436968252|ref|ZP_20607661.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1445]
gi|436976433|ref|ZP_20611831.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1559]
gi|436990772|ref|ZP_20617069.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1565]
gi|437004095|ref|ZP_20621824.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1808]
gi|437014402|ref|ZP_20625480.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1811]
gi|437027005|ref|ZP_20630016.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_0956]
gi|437045221|ref|ZP_20637656.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1455]
gi|437048368|ref|ZP_20639407.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1575]
gi|437060806|ref|ZP_20646633.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1725]
gi|437069928|ref|ZP_20651357.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1745]
gi|437075429|ref|ZP_20653883.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1791]
gi|437080444|ref|ZP_20657048.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1795]
gi|437090958|ref|ZP_20662949.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 576709]
gi|437102562|ref|ZP_20666590.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 635290-58]
gi|437120016|ref|ZP_20671234.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 607308-16]
gi|437127776|ref|ZP_20674866.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 607308-19]
gi|437135736|ref|ZP_20679382.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 607307-2]
gi|437143480|ref|ZP_20684347.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 607308-9]
gi|437154953|ref|ZP_20691413.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 629163]
gi|437160309|ref|ZP_20694560.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. SE15-1]
gi|437167757|ref|ZP_20698955.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CVM_N202]
gi|437173879|ref|ZP_20701950.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CVM_56-3991]
gi|437182739|ref|ZP_20707238.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CVM_76-3618]
gi|437237647|ref|ZP_20714007.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 13183-1]
gi|437258238|ref|ZP_20716275.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CVM_81-2490]
gi|437266727|ref|ZP_20720811.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. SL909]
gi|437278694|ref|ZP_20727355.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. SL913]
gi|437285741|ref|ZP_20729801.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CVM_69-4941]
gi|437313791|ref|ZP_20736959.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 638970-15]
gi|437332145|ref|ZP_20742138.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 17927]
gi|437337972|ref|ZP_20743446.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CHS4]
gi|437405759|ref|ZP_20752256.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 543463 22-17]
gi|437461188|ref|ZP_20762137.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 561362 1-1]
gi|437472552|ref|ZP_20765556.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 642044 4-1]
gi|437493855|ref|ZP_20772229.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 642046 4-7]
gi|437507726|ref|ZP_20776075.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 648898 4-5]
gi|437531896|ref|ZP_20780789.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 648899 3-17]
gi|437553750|ref|ZP_20784111.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 648900 1-16]
gi|437577094|ref|ZP_20790786.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 648901 1-17]
gi|437584379|ref|ZP_20792698.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 648901 39-2]
gi|437600745|ref|ZP_20797281.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 648902 6-8]
gi|437623273|ref|ZP_20804946.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 648903 1-6]
gi|437660517|ref|ZP_20812589.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 653049 13-19]
gi|437735321|ref|ZP_20832409.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 648901 16-16]
gi|437769386|ref|ZP_20835412.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 76-2651]
gi|437804633|ref|ZP_20838961.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 33944]
gi|438088290|ref|ZP_20859746.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 81-2625]
gi|438098372|ref|ZP_20862780.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 62-1976]
gi|438111711|ref|ZP_20868512.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 53-407]
gi|445186965|ref|ZP_21399424.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 20037]
gi|445232321|ref|ZP_21406026.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. SE10]
gi|445330622|ref|ZP_21413902.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 18569]
gi|445347864|ref|ZP_21419449.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 13-1]
gi|445368617|ref|ZP_21425793.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. PT23]
gi|254788648|sp|B5R3R9.1|FADJ_SALEP RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|205349589|gb|EDZ36220.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
subsp. enterica serovar Hadar str. RI_05P066]
gi|206709609|emb|CAR33954.1| putative fatty acid oxidation complex alpha subunit [Salmonella
enterica subsp. enterica serovar Enteritidis str.
P125109]
gi|395988184|gb|EJH97345.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 640631]
gi|395991464|gb|EJI00588.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 622731-39]
gi|395992565|gb|EJI01677.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 639016-6]
gi|396003964|gb|EJI12948.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 77-0424]
gi|396004517|gb|EJI13499.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 607307-6]
gi|396006792|gb|EJI15754.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 485549-17]
gi|396019513|gb|EJI28369.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 596866-22]
gi|396019729|gb|EJI28580.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 629164-26]
gi|396020296|gb|EJI29141.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 596866-70]
gi|396031696|gb|EJI40422.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 639672-50]
gi|396033080|gb|EJI41795.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 629164-37]
gi|396033397|gb|EJI42104.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 639672-46]
gi|396038487|gb|EJI47126.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 77-2659]
gi|396045783|gb|EJI54374.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 77-1427]
gi|396046541|gb|EJI55125.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 78-1757]
gi|396055485|gb|EJI63970.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 8b-1]
gi|396059967|gb|EJI68414.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 22510-1]
gi|396061364|gb|EJI69795.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 648905 5-18]
gi|396067736|gb|EJI76093.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 50-3079]
gi|396069846|gb|EJI78176.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 648901 6-18]
gi|396075173|gb|EJI83449.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 58-6482]
gi|434960933|gb|ELL54267.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CHS44]
gi|434967561|gb|ELL60377.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1882]
gi|434971730|gb|ELL64233.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1884]
gi|434983504|gb|ELL75300.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1594]
gi|434989156|gb|ELL80729.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1566]
gi|434990907|gb|ELL82437.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1580]
gi|434998734|gb|ELL89948.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1543]
gi|435000302|gb|ELL91450.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1441]
gi|435006243|gb|ELL97144.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1810]
gi|435007185|gb|ELL98040.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. SE30663]
gi|435008269|gb|ELL99095.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1558]
gi|435014296|gb|ELM04873.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1018]
gi|435021585|gb|ELM11953.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1010]
gi|435028963|gb|ELM19023.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1729]
gi|435031739|gb|ELM21694.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_0895]
gi|435041216|gb|ELM30959.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_0899]
gi|435042049|gb|ELM31781.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1457]
gi|435044226|gb|ELM33923.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1747]
gi|435055381|gb|ELM44793.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_0968]
gi|435056802|gb|ELM46172.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1444]
gi|435060564|gb|ELM49811.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1445]
gi|435069269|gb|ELM58271.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1565]
gi|435071854|gb|ELM60791.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1559]
gi|435072837|gb|ELM61742.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1808]
gi|435080449|gb|ELM69130.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1455]
gi|435084930|gb|ELM73485.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1811]
gi|435086151|gb|ELM74696.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_0956]
gi|435090086|gb|ELM78490.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1725]
gi|435091844|gb|ELM80218.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1745]
gi|435098801|gb|ELM87030.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1575]
gi|435106236|gb|ELM94255.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1791]
gi|435113107|gb|ELN00956.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CDC_2010K_1795]
gi|435113274|gb|ELN01122.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 576709]
gi|435122653|gb|ELN10166.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 635290-58]
gi|435128615|gb|ELN15952.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 607308-16]
gi|435129359|gb|ELN16655.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 607308-19]
gi|435137525|gb|ELN24565.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 607307-2]
gi|435138959|gb|ELN25974.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 629163]
gi|435140334|gb|ELN27297.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 607308-9]
gi|435147597|gb|ELN34359.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. SE15-1]
gi|435150735|gb|ELN37399.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CVM_N202]
gi|435158111|gb|ELN44522.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CVM_56-3991]
gi|435164278|gb|ELN50375.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CVM_76-3618]
gi|435166567|gb|ELN52540.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CVM_81-2490]
gi|435171798|gb|ELN57354.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. SL913]
gi|435176580|gb|ELN61947.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. SL909]
gi|435182022|gb|ELN67056.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 638970-15]
gi|435184965|gb|ELN69867.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CVM_69-4941]
gi|435187136|gb|ELN71939.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 13183-1]
gi|435188546|gb|ELN73255.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 17927]
gi|435196468|gb|ELN80800.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. CHS4]
gi|435205218|gb|ELN88835.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 543463 22-17]
gi|435220246|gb|ELO02543.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 561362 1-1]
gi|435225853|gb|ELO07451.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 642044 4-1]
gi|435227710|gb|ELO09170.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 642046 4-7]
gi|435233706|gb|ELO14679.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 648898 4-5]
gi|435243161|gb|ELO23445.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 648901 1-17]
gi|435243258|gb|ELO23532.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 648899 3-17]
gi|435244540|gb|ELO24759.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 648900 1-16]
gi|435255149|gb|ELO34520.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 648903 1-6]
gi|435261870|gb|ELO41014.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 648902 6-8]
gi|435263059|gb|ELO42136.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 648901 39-2]
gi|435269084|gb|ELO47637.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 653049 13-19]
gi|435286056|gb|ELO63391.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 648901 16-16]
gi|435302436|gb|ELO78394.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 33944]
gi|435306660|gb|ELO81928.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 76-2651]
gi|435317648|gb|ELO90678.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 81-2625]
gi|435326581|gb|ELO98393.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 62-1976]
gi|435330947|gb|ELP02188.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 53-407]
gi|444862539|gb|ELX87390.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. SE10]
gi|444869231|gb|ELX93825.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 20037]
gi|444876609|gb|ELY00774.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 13-1]
gi|444877973|gb|ELY02104.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 18569]
gi|444882215|gb|ELY06206.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. PT23]
Length = 715
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 228/708 (32%), Positives = 360/708 (50%), Gaps = 37/708 (5%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 74 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 132
Query: 128 KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 184
KT LGLPE+ LG++PG TQRLPRLVG+S A++M+L K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDVVPQT 192
Query: 185 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 242
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 193 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 248
Query: 243 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 302
+DVIE G+ G SG EA+ F EL M S+ L VFFA K P +D P
Sbjct: 249 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAVFFASTEVKKDPG-SDAPPGP 307
Query: 303 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 362
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 308 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 366
Query: 363 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 422
++ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 367 ANERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCAAHTIFASNTSS 426
Query: 423 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 482
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 427 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 486
Query: 483 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAA 542
V + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 487 VSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVGIDTGTK 546
Query: 543 TSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DPSVLPII 597
+ A+ +R F +P +V +L R G+ NG+G Y Y EKG K K DP++ +I
Sbjct: 547 IIPVLEAAYGER-FSAPANVVASILNDDRKGRKNGRGFYLYGEKGRKSKKQVDPAIYKLI 605
Query: 598 --EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGM 655
+ RLS +++ E + ++NE+ R +E ++ A D D +V G+
Sbjct: 606 GVQGQSRLS------------AQQVAERCVMLMLNEAARCFDEKVIRSARDGDIGAVFGI 653
Query: 656 SFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATK 703
FP + GG + DA+G + +L++ + LYG + P L A +
Sbjct: 654 GFPPFLGGPFRYMDALGPGEMVATLQRLAALYGPRYAPCEQLVRMAER 701
>gi|445170469|ref|ZP_21395717.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. SE8a]
gi|444862382|gb|ELX87238.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Enteritidis
str. SE8a]
Length = 715
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 228/708 (32%), Positives = 361/708 (50%), Gaps = 37/708 (5%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 74 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 132
Query: 128 KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 184
KT LGLPE+ LG++PG TQRLPRLVG+S A++M+L K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDVVPQT 192
Query: 185 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 242
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 193 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 248
Query: 243 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 302
+DVIE G+ G SG EA+ F EL M S+ L VFFA K P +D P
Sbjct: 249 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAVFFASTEVKKDPG-SDAPPGP 307
Query: 303 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 362
+ G G TA + + V +K++N++ + +K + V R +
Sbjct: 308 LNSVGILGGGLMGGGIAWVTACKVG-LPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 366
Query: 363 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 422
++ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 367 ANERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCAAHTIFASNTSS 426
Query: 423 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 482
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 427 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 486
Query: 483 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAA 542
V + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 487 VSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVGIDTGTK 546
Query: 543 TSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DPSVLPII 597
+ A+ +R F +P +V +L R G+ NG+G Y Y EKG K K DP++ +I
Sbjct: 547 IIPVLEAAYGER-FSAPANVVASILNDDRKGRKNGRGFYLYGEKGRKSKKQVDPAIYKLI 605
Query: 598 --EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGM 655
+ RLS +++ E + ++NE+ R +E ++ A D D +V G+
Sbjct: 606 GVQGQSRLS------------AQQVAERCVMLMLNEAARCFDEKVIRSARDGDIGAVFGI 653
Query: 656 SFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATK 703
FP + GG + DA+G + +L++ + LYG + P L A +
Sbjct: 654 GFPPFLGGPFRYMDALGPGEMVATLQRLAALYGPRYAPCEQLVRMAER 701
>gi|398790469|ref|ZP_10551489.1| fatty oxidation complex, alpha subunit FadJ [Pantoea sp. YR343]
gi|398218591|gb|EJN05094.1| fatty oxidation complex, alpha subunit FadJ [Pantoea sp. YR343]
Length = 709
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 238/700 (34%), Positives = 362/700 (51%), Gaps = 34/700 (4%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSGGFDINV 69
D V +IT+ P +N L V +K +EA S D+ +VL +G F G DI++
Sbjct: 13 DHVGVITIDVPGEKMNTLKDEFVPQIKAVLDEARSHQDLAGLVLISGKPDNFVAGADISM 72
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA--P 127
A + + + V+ +I P+VAA+ G LGGGLELA+ C ARI +
Sbjct: 73 IASCKTAEEAEALAKQGQD-VMAMIAALPFPVVAAIHGACLGGGLELALACDARICSLDD 131
Query: 128 KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 184
KT+LGLPE+ LG++PG TQRLPRL+GL +A+ ++L K + +++ KLG++D V
Sbjct: 132 KTRLGLPEVQLGLLPGSGGTQRLPRLIGLQQALPLILTGKQLRAKQALKLGIVDDAVPQS 191
Query: 185 ELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVL-KLARLQAK-KTAPNMPQHQ 242
LL+ A+ + K R L R D+L AR+VL LA+ Q KT N P
Sbjct: 192 ILLET----AIARVHKGKGARRELSRRDRLLQGPIARQVLFSLAQRQTHSKTQGNYPAAD 247
Query: 243 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 302
L+V+ G+ G +G EA+ F +L M S L +FFA A K + ++P
Sbjct: 248 RILEVVRIGLEQGSSAGHEAEARAFGQLAMTPESAALRSLFFASTALKKESMAS---VEP 304
Query: 303 RGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 361
+ ++++ V+GGGLMG GIA+ L + V +K++N + ++ + V R +L
Sbjct: 305 QALKQIGVLGGGLMGGGIASVTALKAGLPVRIKDINLNGVNHALQYSWDLLSNKVKRRQL 364
Query: 362 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 421
+ + + G +DY F D+VIEAV E + LKQ++ SE+E C PH I A+NTS
Sbjct: 365 KAAERQQQMARISGGIDYQGFSQRDLVIEAVFEDLALKQQMVSEIESHCQPHTIFASNTS 424
Query: 422 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 481
++ + + + IIG H+FSP MPL+E++ TSAQ + + + + + K V
Sbjct: 425 SLPIADIAAHAQRPENIIGLHYFSPVDKMPLVEVIPHANTSAQTLANTVQLARQQGKTAV 484
Query: 482 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAA 541
VV + GF VNR PY A + G + ID A+ FG P+GP QLLD G V +
Sbjct: 485 VVADRPGFYVNRILAPYINEAMHCLQEGEPIEHIDRALVKFGFPVGPLQLLDEVGIDVGS 544
Query: 542 ATSKEFDKAFPDRSFQSP-LVDLLLKSGRNGKANGKGLYTYEKGSKP---KPDPSVLPII 597
S ++A+ R F +P + +L GR G+ N KG Y Y++ P K D S+ ++
Sbjct: 545 KISPILEQAYGSR-FSAPNAANAILADGRKGRKNHKGFYLYQRSRWPGKRKADASIYTLL 603
Query: 598 EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSF 657
NI P K +E +I E + ++NE+ R L+ ++ A D D A+V G+ F
Sbjct: 604 -------NIKPQAKQ---SEAQIAERCVLMMLNEAARCLDAAVIRNARDGDIAAVFGIGF 653
Query: 658 PSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 697
P + GG + D G + +L Q +G F PS L
Sbjct: 654 PPFLGGPFRYMDQRGIGDIVKALSSLMQQHGERFTPSEAL 693
>gi|418860581|ref|ZP_13415157.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 19470]
gi|418865117|ref|ZP_13419632.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 19536]
gi|392826369|gb|EJA82097.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 19470]
gi|392829203|gb|EJA84884.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 19536]
Length = 715
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 227/702 (32%), Positives = 357/702 (50%), Gaps = 37/702 (5%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 74 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 132
Query: 128 KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 184
KT LGLPE+ LG++PG TQRLPRLVG+S A++M+L K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDVVPQT 192
Query: 185 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 242
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 193 ILLEA----AVELAKKERLAQRTLSVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 248
Query: 243 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 302
+DVIE G+ G SG EA+ F EL M S+ L VFFA K P +D P
Sbjct: 249 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAVFFASTEVKKDPG-SDAPPGP 307
Query: 303 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 362
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 308 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 366
Query: 363 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 422
+ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 367 ASERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCATHTIFASNTSS 426
Query: 423 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 482
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 427 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 486
Query: 483 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAA 542
V + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 487 VSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVGIDTGTK 546
Query: 543 TSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DPSVLPII 597
+ A+ +R F +P +V +L R G+ NG+G Y Y EKG K K DP++ +I
Sbjct: 547 IIPVLEAAYGER-FSAPANVVASILNDDRKGRKNGRGFYLYGEKGRKSKKQVDPAIYKLI 605
Query: 598 --EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGM 655
+ RLS +++ E + ++NE+ R +E ++ A D D +V G+
Sbjct: 606 GVQGQSRLS------------AQQVAERCVMLMLNEAARCFDEKVIRSARDGDIGAVFGI 653
Query: 656 SFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 697
FP + GG + DA+G + +L++ + LYG + P L
Sbjct: 654 GFPPFLGGPFRYMDALGPGEMVATLQRLAALYGPRYAPCEQL 695
>gi|205353501|ref|YP_002227302.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Gallinarum
str. 287/91]
gi|375124344|ref|ZP_09769508.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Gallinarum
str. SG9]
gi|445134084|ref|ZP_21382767.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Gallinarum
str. 9184]
gi|254788647|sp|B5RCL3.1|FADJ_SALG2 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|205273282|emb|CAR38247.1| putative fatty acid oxidation complex alpha subunit [Salmonella
enterica subsp. enterica serovar Gallinarum str. 287/91]
gi|326628594|gb|EGE34937.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Gallinarum
str. SG9]
gi|444847013|gb|ELX72164.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Gallinarum
str. 9184]
Length = 715
Score = 333 bits (853), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 228/708 (32%), Positives = 360/708 (50%), Gaps = 37/708 (5%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 74 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 132
Query: 128 KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 184
KT LGLPE+ LG++PG TQRLPRLVG+S A++M+L K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDVVPQT 192
Query: 185 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 242
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 193 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 248
Query: 243 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 302
+DVIE G+ G SG EA+ F EL M S+ L VFFA K P +D P
Sbjct: 249 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAVFFASTEVKKDPG-SDAPPGP 307
Query: 303 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 362
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 308 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 366
Query: 363 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 422
++ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 367 ANERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCAAHTIFASNTSS 426
Query: 423 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 482
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 427 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 486
Query: 483 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAA 542
V + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 487 VSDKAGFYVNRILAPYINKAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVGIDTGTK 546
Query: 543 TSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DPSVLPII 597
+ A+ +R F +P +V +L R G+ NG+G Y Y EKG K K DP++ +I
Sbjct: 547 IIPVLEAAYGER-FSAPANVVASILNDDRKGRKNGRGFYLYGEKGRKSKKQVDPAIYKLI 605
Query: 598 --EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGM 655
+ RLS +++ E + ++NE+ R +E ++ A D D +V G+
Sbjct: 606 GVQGQSRLS------------AQQVAERCVMLMLNEAARCFDEKVIRSARDGDIGAVFGI 653
Query: 656 SFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATK 703
FP + GG + DA+G + +L++ + LYG + P L A +
Sbjct: 654 GFPPFLGGPFRYMDALGPGEMVATLQRLAALYGPRYAPCEQLVRMAER 701
>gi|344280397|ref|XP_003411970.1| PREDICTED: trifunctional enzyme subunit alpha, mitochondrial-like
[Loxodonta africana]
Length = 763
Score = 333 bits (853), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 228/728 (31%), Positives = 368/728 (50%), Gaps = 40/728 (5%)
Query: 5 RVTMEVGNDGVAIITLINPP---VNALAIPIVAGLKDKFEEATSRDDVK-AIVLTGNGGR 60
R + G G + IN P VN L + A L + E + D ++ A++++ G
Sbjct: 38 RTYINYGVKGDVAVVRINSPNSKVNTLNKELHAELVEVMNEIWASDQIRSAVLISSKPGC 97
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
F G DIN+ + +V+ + + + +E KPIVAA+ G LGGGLELA+ C
Sbjct: 98 FIAGADINMLSSCKTSQEVTQISQ-EAQSMFEKVEKSPKPIVAAISGSCLGGGLELAISC 156
Query: 121 HARIAAP--KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLG 175
H RIA KT LG PE+ LG++PG TQRLP++VG+ A +MML ++I +++ K+G
Sbjct: 157 HYRIATKDKKTVLGSPEVLLGILPGAGGTQRLPKMVGIPGAFDMMLTGRNIRADKAKKMG 216
Query: 176 LIDAVV-------------TSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEA-- 220
L+D +V T E L +V+ +A ++A ++ R +KL S +
Sbjct: 217 LVDQLVEPLGPGIKPPEERTIEYLEEVAVTFAKELADKKISPKRDKGLVEKLTSYAMTIP 276
Query: 221 ---REVLKLARLQAKKTAPNM-PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 276
++V K + +K + P ++V++ GI G +G L E++ F EL M S
Sbjct: 277 FIRQQVYKKVEEKVQKQTKGLYPAPLKIIEVVKTGIEQGNDAGYLSESQKFGELAMTKES 336
Query: 277 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 336
+ L+ ++ +Q + G + V+ +A++G GLMG+GIA + + +LK+
Sbjct: 337 KALMGLYHSQVQCKR----NKFGAPQKDVKHLAILGAGLMGAGIAQVSVDKGLKTILKDA 392
Query: 337 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 396
L +G + + + V + LT + ++ L G LDY F+ DMVIEAV E +
Sbjct: 393 TLPALGRGQQQVFNGLNDKVKKKSLTSFERDSIFSNLTGQLDYQGFEKADMVIEAVFEDL 452
Query: 397 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 456
+K K+ E+E P HC+ A+NTS + ++ + + +++IG H+FSP M LLEI+
Sbjct: 453 NIKHKVLKEVEAVIPDHCVFASNTSALPISKIAAVSKRPEKVIGMHYFSPVDKMQLLEII 512
Query: 457 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 516
TE+TS +TVG KV +VV + GF R P ++ GV ++D
Sbjct: 513 TTEKTSKDTTASAVTVGLQQGKVIIVVKDGPGFYTTRCLAPMMSEVIKILQEGVGPKKLD 572
Query: 517 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKAN 574
S FG P+G L+D G VA S++ KAF +R S L+ ++ G G+ +
Sbjct: 573 SLTTGFGFPVGAATLMDEVGVDVANHVSEDLGKAFGERFGSGSGELLKQMVSKGFLGRKS 632
Query: 575 GKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCR 634
GKG Y YE+G K K S + I L+++ KP ++++I ++ VNE+
Sbjct: 633 GKGFYIYEEGVKSKNLNSDMDSI-----LASLKVPPKPDVSSDEDIQYRLVTRFVNEAVM 687
Query: 635 VLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPS 694
L+EGI+ ++ D +V G+ FP GG + D GA V L+++ YG F P
Sbjct: 688 CLQEGILATPAEGDIGAVFGLGFPPCLGGPFRFVDLYGAQKVVDRLRRYEAAYGKQFTPC 747
Query: 695 RFLEERAT 702
+ L + A
Sbjct: 748 QLLIDHAN 755
>gi|383936625|ref|ZP_09990048.1| 3-hydroxyacyl-CoA dehydrogenase [Rheinheimera nanhaiensis E407-8]
gi|383702287|dbj|GAB60139.1| 3-hydroxyacyl-CoA dehydrogenase [Rheinheimera nanhaiensis E407-8]
Length = 710
Score = 333 bits (853), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 243/717 (33%), Positives = 370/717 (51%), Gaps = 40/717 (5%)
Query: 7 TMEVGNDGVAIITL--INPPVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
++++ +D V +IT+ +N L + + + +K +V ++G F
Sbjct: 8 SLQIRDDNVGVITMDIAGESMNVLKAAFADEISQLLSDIKANSQLKGLVFISGKPDSFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DI++ A + + + ++ L E P+VAA+ G LGGGLELAM CHAR
Sbjct: 68 GADISMLDGCKTAEEAQAIGRMGQQMFDQL-EQLPIPLVAAIHGPCLGGGLELAMACHAR 126
Query: 124 IAAP--KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+A KT LGLPE+ LG++PG TQRLP+LVGL KA++M+L K + + + K GL+D
Sbjct: 127 VATSDSKTVLGLPEVQLGLLPGSGGTQRLPKLVGLQKALDMILTGKQLRAAQAKKAGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSE----AREVL-KLARLQA-K 232
VV + LL + AL +R+P +L +G + E R +L AR Q
Sbjct: 187 EVVPNSILLDAAVKLALKGKPKREPVKLNL-----VGKVLERTPFGRNILFSQARKQTLS 241
Query: 233 KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 292
KT N P LDVI+ G+ G +G+ EAK F EL M S L +FFA T+++
Sbjct: 242 KTQGNYPAPLKILDVIKTGVDSGMQAGLAAEAKAFGELCMTKESAALRSLFFA---TTQM 298
Query: 293 PNVTDIG-LKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEA 350
T G KP VRK AV+GGGLMG GIA I V +K++N + + +K +
Sbjct: 299 KKETGAGETKPNKVRKAAVLGGGLMGGGIANVTATKAGIAVRIKDINEQGISNALKYSYS 358
Query: 351 NVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKAC 410
+ R +++ + L ++ G DYS F D D+V+EAV E + LKQ++ +++E+ C
Sbjct: 359 LLEKKFNRRFISKAEMQKQLLLITGTTDYSGFHDADIVVEAVFEDLALKQQMVADIEQHC 418
Query: 411 PPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLM 470
+ I A+NTS++ + + K + +IG H+FSP MPL+E++ E TSAQ I +
Sbjct: 419 SENTIFASNTSSLPIKQIAAKAQRPENVIGLHYFSPVDKMPLVEVIAHEGTSAQTIATTV 478
Query: 471 TVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 530
+ K P+VV + GF VNR Y A ++ G V +ID A+ FG P+GP
Sbjct: 479 AFARKQGKTPIVVKDGAGFYVNRILALYMNEAANVLLEGEPVEKIDKALVKFGFPVGPVT 538
Query: 531 LLDLAGYGVAAATSKEFDKAFPDRSFQSPLV-DLLLKSGRNGKANGKGLYTYEKGS---K 586
LLD G V A S + +R F +P D LL GR GK + KG Y Y K + K
Sbjct: 539 LLDEVGIDVGAKISPILTQELGER-FSAPAAFDKLLADGRKGKKSEKGFYRYGKTAKKGK 597
Query: 587 PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASD 646
+ D SV ++ + P + + EI + ++NE+ R LEEGI+ A D
Sbjct: 598 KQVDDSVYSVL-------GVTPAPR---LNSDEISSRCVVQMLNEAVRCLEEGIIASARD 647
Query: 647 LDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATK 703
D ++ G+ FP + GG + D +GA+ + L+ +G+ F P+ L + A +
Sbjct: 648 GDIGAIFGIGFPPFLGGPFRYIDQLGADKLVAQLRNLESRFGSRFAPAHLLVQMAEQ 704
>gi|197120856|ref|YP_002132807.1| multifunctional fatty acid oxidation complex subunit alpha
[Anaeromyxobacter sp. K]
gi|196170705|gb|ACG71678.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Anaeromyxobacter sp.
K]
Length = 725
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 245/716 (34%), Positives = 374/716 (52%), Gaps = 39/716 (5%)
Query: 14 GVAIITLINP-----PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSGGFDI 67
GVA + L P V+ A+ A D+ E+ + VKA+V+ TG + G +
Sbjct: 24 GVATLVLDEPGERVNTVHPEAMREFAAHLDRLEKDEA---VKAVVVATGKPDVWVAGAKV 80
Query: 68 NVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA- 126
+ Q+ A + + + + + +E C+KP+VAA+ G LGGGLE A+ CH RIA
Sbjct: 81 ELMQEAKDAAEAERL-SRDGQALFDRVERCRKPVVAAIHGACLGGGLEWALACHYRIATD 139
Query: 127 -PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 182
PKT LGL E+ LG+IPG TQRLPRL+G+ A++++L K++ + + KLGL+D V
Sbjct: 140 HPKTSLGLVEVQLGLIPGGGGTQRLPRLIGIQPALDLILAGKTVKARKALKLGLVDEAVP 199
Query: 183 SEELLKVSRLWALDIAA---RRKPW--IRSLHRTDKLGSLSE---AREVL--KLARLQAK 232
L +V++ A +A+ RR P ++ R + +L E REVL + +L
Sbjct: 200 PPLLRQVAQERAAALASGKLRRAPRRDAGAVARVTR-AALEENFLGREVLFRQARKLTLA 258
Query: 233 KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 292
KT + P L+ IE G G G+ KEA++F +L M + L+ +FFA A K
Sbjct: 259 KTKGHYPAPLRALEAIEHGYAKGFEKGLEKEAELFGKLAMTPEAHRLMEIFFATTALKKD 318
Query: 293 PNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANV 352
V D +K R V V V+GGGLMG GIA + + V L+E + G+ + +
Sbjct: 319 NGVDDPAVKARPVSAVGVLGGGLMGGGIAYVTVNAGLPVRLRERDDAAAAHGVAAVRGVL 378
Query: 353 RGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPP 412
V R + + + L++L D+S + VD+++EAV E + LKQ++ E A P
Sbjct: 379 DERVKRRSIDRLERAEKLRLLTTTTDWSGLERVDVLVEAVFEDLALKQEMVRAFE-AVNP 437
Query: 413 HCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTV 472
I A+NTS+I + + E + + ++G H+FSP H MPLLE++ T RT+ + + +
Sbjct: 438 TGIFASNTSSIPIGRIAEASRHPETVLGMHYFSPVHKMPLLEVIVTPRTAPEATATAVAL 497
Query: 473 GKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLL 532
GK K +VV + GF +R PY A L+ G + +D A+ +FG P+GP LL
Sbjct: 498 GKKQGKTVIVVRDGPGFYTSRILAPYMNEAAHLLVEGAAIEDLDHALVAFGFPVGPITLL 557
Query: 533 DLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPS 592
D G V K +AF R P + ++K+GR G+ NGKG YTY G + + D +
Sbjct: 558 DEVGIDVGDKVGKILQEAFGARMAPPPALHDVVKAGRLGRKNGKGFYTY-GGKEKRVDET 616
Query: 593 VLPIIEECRRLSNIMPGGKPIS-VTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDAS 651
V +++PGG+ V EI E ++ +VNE+ R L EGI+ A D D +
Sbjct: 617 VY----------DLLPGGRRRKRVAADEIQERLVLQLVNEAVRCLGEGILRSARDGDVGA 666
Query: 652 VLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPL 707
V G+ FP +RGG WADAVG + +++ +G F+P+ L E G P
Sbjct: 667 VFGLGFPPFRGGPFRWADAVGTKALLDRMERLRARHGERFEPAPLLAELGRAGRPF 722
>gi|421495832|ref|ZP_15943086.1| Fatty oxidation complex subunit alpha [Aeromonas media WS]
gi|407185171|gb|EKE58974.1| Fatty oxidation complex subunit alpha [Aeromonas media WS]
Length = 716
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 240/731 (32%), Positives = 376/731 (51%), Gaps = 49/731 (6%)
Query: 1 MAAPRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEAT-SRDDVKAIVLTGN 57
M+A ++++ DG+ I+T+ P +N L ++ E +RD + ++ +G
Sbjct: 2 MSAKTFSLDIRKDGIGILTMDVPGESMNTLKAAFADEIRTVLAEIKGNRDLIGLVIASGK 61
Query: 58 GGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELA 117
F G DI++ A D + ++V IE P++AA+ G LGGGLELA
Sbjct: 62 KDSFIAGADISMLAACTSARDAETLSREG-QVVFAEIEALTIPVIAAIHGPCLGGGLELA 120
Query: 118 MGCHARIAAP--KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGW 172
+ CH R+ KT LGLPE+ LG++PG TQRLPRL+G++KA+++ML K + +++
Sbjct: 121 LACHGRVVTEHGKTVLGLPEVQLGLLPGSGGTQRLPRLIGVAKALDLMLTGKQVRAKQAK 180
Query: 173 KLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSE----AREVL-KLA 227
KLGL+D VV LL+ A+ +A + KP R + D G + E R+VL A
Sbjct: 181 KLGLVDDVVPPSILLEA----AIKLAKKGKP--RHTLKRDLQGKVLETNALGRKVLFDQA 234
Query: 228 RLQAK-KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQ 286
R K KT N P + L+V+ G+ G +G+ E++ F ELVM S L +FFA
Sbjct: 235 RKGVKAKTRGNYPAPERILEVVRIGVEEGMQAGLAAESRHFGELVMTAESAALRSIFFAT 294
Query: 287 RATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIA-TAHILNNIYVVLKEVNSEYLLKGI 345
K V+ G +PR V AV+GGGLMG GIA + V +K+V S + +
Sbjct: 295 TEMKK--EVSYQGAEPRKVAHAAVLGGGLMGGGIAFVTATKAGVPVRIKDVGSAGIGNAM 352
Query: 346 KTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSE 405
+ + + R +L + + + +L G LDY+ F VDMV+EAV E + LK ++ ++
Sbjct: 353 RYSYDLLAKKLKRRQLLRSELEKQMSLLTGTLDYAGFHRVDMVVEAVFEDLALKHQMVAD 412
Query: 406 LEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQV 465
+E+ C H + A+NTS++ ++ + + +R++G H+FSP MPL EI+ TS +
Sbjct: 413 VERECGEHTVFASNTSSLPIHQIAANAAHPERVVGLHYFSPVDKMPLAEIIPHAGTSPET 472
Query: 466 ILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLP 525
+ + + K P+VV + GF VNR PY A LV G V +DSA+ FG P
Sbjct: 473 VATTLAFARAQGKTPIVVKDEAGFYVNRILAPYMNEAARLVLEGEPVEVLDSALLDFGFP 532
Query: 526 IGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP-LVDLLLKSGRNGKANGKGLYTYEKG 584
+GP LLD G V A S +K FQ+P D LL+ R G+ NGKG Y Y K
Sbjct: 533 VGPITLLDEVGIDVGAKISPILEKELGGEQFQAPKAFDKLLQDDRKGRKNGKGFYLYGKA 592
Query: 585 S----------KPKPDPSVLPIIEECRRLSNIMPGGKPIS--VTEKEIVEMILFPVVNES 632
+ K D SV ++ G +S + +EI E + ++NE+
Sbjct: 593 APRNRLTGKEGKKTVDESVYAVL------------GVKVSPKLARQEIAERCVLLMLNEA 640
Query: 633 CRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFK 692
L+ G+V A D D ++ G+ FP + GG + D++G +++ L+ + + +G+ F
Sbjct: 641 AMALDSGVVASARDGDIGAIFGIGFPPFLGGPFRYMDSLGIDHLVGRLEHYQKRHGDRFA 700
Query: 693 PSRFLEERATK 703
P L+ A +
Sbjct: 701 PCARLKAMAAE 711
>gi|323499534|ref|ZP_08104504.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
sinaloensis DSM 21326]
gi|323315407|gb|EGA68448.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
sinaloensis DSM 21326]
Length = 707
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 212/651 (32%), Positives = 353/651 (54%), Gaps = 27/651 (4%)
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
F G D+ + + + + ++ L D P+VAA+ G LGGGLELA+ C
Sbjct: 66 FVAGADVRMLDACTTTAEAQALAEKGQQMFQQL-SDLPYPVVAAIHGPCLGGGLELALAC 124
Query: 121 HARIA--APKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLG 175
R+ + KT+LGLPE+ LG++PG TQRLPRL+GL +++++L K + +++ KLG
Sbjct: 125 DYRVCTDSDKTRLGLPEVQLGLLPGSGGTQRLPRLIGLLPSLDLILTGKQLRAKKAKKLG 184
Query: 176 LIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVL--KLARLQAKK 233
++DAVV LL V++ + ++K ++ + + + R+V+ + A+ +K
Sbjct: 185 VVDAVVPDTILLDVAKSLIDKHSGKKKAKRQASTKEKLIANTGLGRKVIFEQAAKKTHEK 244
Query: 234 TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 293
T N P A L+VI G+ G G KEA+ F ELVM S+ L +FFA T+++
Sbjct: 245 TRGNYPAADAILEVIRFGLEKGFEKGQKKEAERFAELVMTPESKALRSIFFA---TTEMK 301
Query: 294 NVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEANV 352
P+ V++ AV+GGGLMG+GI+ + + V +K+V+++ +L +K
Sbjct: 302 KENGADADPKQVKRAAVLGGGLMGAGISHVSVAKAKVPVRIKDVSNDGVLNALKYNYKLF 361
Query: 353 RGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPP 412
R +++ + + + L G +D++ F D+VIEAV E + LKQ + +++E+
Sbjct: 362 ETQRKRRIISKAQLQSKMLQLSGGIDFTNFNHTDIVIEAVFEDLELKQTMVADIEENAKE 421
Query: 413 HCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTV 472
I ATNTS++ + + EK + ++G H+FSP MPL+E++ E TS + + ++
Sbjct: 422 STIFATNTSSLPIAQIAEKAKRPENVVGLHYFSPVEKMPLVEVIPHEGTSEEAVSTVVEF 481
Query: 473 GKIIKKVPVVVGNCTGFAVNRAFFPY-SQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQL 531
+ K P+VV + GF VNR PY ++SA++L+S G + +D+A+ +FG P+GP L
Sbjct: 482 ARKQGKTPIVVKDSAGFYVNRILAPYMNESAQILMS-GEPIGHLDNALLNFGFPVGPITL 540
Query: 532 LDLAGYGVAAATSKEFDKAFPDRSFQSPLV-DLLLKSGRNGKANGKGLYTYEKGSKPKPD 590
LD G + A +R FQ P V D LL GR G+ +GKG YTY KG K + D
Sbjct: 541 LDEVGVDIGAKIMPILVNELGER-FQGPDVFDTLLNDGRKGRKSGKGFYTY-KGKKKEVD 598
Query: 591 PSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDA 650
SV +L + P K + ++++ + P++NE+ R L+EGI+ D D
Sbjct: 599 KSVY-------KLLGLSPESK---MAQQDMAMRCVLPMLNEAVRCLDEGIIRSPRDGDIG 648
Query: 651 SVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERA 701
++ G+ FP + GG + D +G + + + ++ YG+ F P L RA
Sbjct: 649 AIFGIGFPPFLGGPFRYMDQIGVKKLVEIMNEHAEKYGDRFAPCDGLLTRA 699
>gi|378580464|ref|ZP_09829121.1| enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Pantoea
stewartii subsp. stewartii DC283]
gi|377816788|gb|EHT99886.1| enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Pantoea
stewartii subsp. stewartii DC283]
Length = 706
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 238/711 (33%), Positives = 363/711 (51%), Gaps = 33/711 (4%)
Query: 7 TMEVGNDGVAIITL--INPPVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+++ +D V +IT+ N +N L + EA + +VL +G F
Sbjct: 7 TLQMRDDHVGVITIDVPNEKMNTLKAEFAVQIASLISEARQHPQLLGLVLISGKPDNFVA 66
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DI++ + A + + E V+ I P+VAA+ G LGGGLELA+ CH+R
Sbjct: 67 GADISMIDRCQRADEAEALARQGQE-VMAAIAALPFPVVAAIHGACLGGGLELALACHSR 125
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
I KT+LGLPE+ LG++PG TQRLP L+G+ KA+ ++L KS+ +++ KLG++D
Sbjct: 126 ICTLDDKTRLGLPEVQLGLLPGSGGTQRLPHLIGVQKALPLILTGKSLRAKQAKKLGIVD 185
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEARE-VLKLARLQA-KKTAP 236
V LL + RR P L D+L AR+ +L L R + +KT
Sbjct: 186 DAVPQAILLDTAIESVKKGKRRRAP----LPLRDRLLQGPIARQALLALVRRETERKTQG 241
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P Q +DV+ G+ +G EA+ F EL M S L +FFA A K N T
Sbjct: 242 NYPAAQRIIDVVRIGLEQSSQAGYAAEARAFGELAMTPESAALRSLFFASTALKK-ENGT 300
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEANVRGL 355
+ +PR V +V V+GGGLMG GIA ++ + V +K+++ + ++T A +
Sbjct: 301 EA--QPRPVERVGVLGGGLMGGGIACVSAIHAGLPVRIKDISLNGINHALQTSWALLSKK 358
Query: 356 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCI 415
V R +LT + + + G DY F D+VIEAV E + LKQ++ +E+E C P I
Sbjct: 359 VQRRQLTPAQRQQQMARISGGTDYQGFTQRDIVIEAVFEDLALKQQMVAEVETHCQPQTI 418
Query: 416 LATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKI 475
A+NTS++ + + K + + IIG H+FSP MPL+E++ TS + + +T+ +
Sbjct: 419 FASNTSSLPIADIAAKAARPENIIGLHYFSPVEKMPLVEVIPHAATSPETLASTVTLARK 478
Query: 476 IKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLA 535
K P+VV + GF VNR PY A + G V ID A+ FG P+GP QLLD
Sbjct: 479 QGKTPIVVADRPGFYVNRILTPYINEAMRCLLEGEPVEHIDRALVMFGFPVGPVQLLDEV 538
Query: 536 GYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTY--EKGSKPKPDPSV 593
G V + S +A+ +R P + ++ GR G+ N KG Y Y + + KPDP+V
Sbjct: 539 GIDVGSKISPGLQQAYGERFAAPPALAAVINDGRKGRKNHKGFYLYGSSRLQRKKPDPTV 598
Query: 594 LPIIEECRRLSNIMPGGKPISVTE-KEIVEMILFPVVNESCRVLEEGIVVRASDLDDASV 652
+++ KP SV I E + ++NE+ R L+E ++ D D +V
Sbjct: 599 YDVLQI-----------KPASVQSGAHIAERCVMMMLNEAVRCLDEQVIRSPRDGDIGAV 647
Query: 653 LGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATK 703
G+ FP + GG + D +GA + L + Q YG+ F P L+ A +
Sbjct: 648 FGIGFPPFLGGPFHYIDRLGAGEIVNRLTRLEQQYGDRFAPCERLQRAAQQ 698
>gi|168242516|ref|ZP_02667448.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL486]
gi|168817872|ref|ZP_02829872.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
subsp. enterica serovar Weltevreden str. HI_N05-537]
gi|194451326|ref|YP_002046443.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Heidelberg
str. SL476]
gi|197248926|ref|YP_002147346.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Agona str.
SL483]
gi|197263338|ref|ZP_03163412.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA23]
gi|200388801|ref|ZP_03215413.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
subsp. enterica serovar Virchow str. SL491]
gi|386592196|ref|YP_006088596.1| Fatty acid oxidation complex subunit alpha [Salmonella enterica
subsp. enterica serovar Heidelberg str. B182]
gi|409250994|ref|YP_006886800.1| enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase /
3-hydroxybutyryl-CoA epimerase [Salmonella enterica
subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
gi|419728519|ref|ZP_14255484.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Heidelberg
str. 41579]
gi|419733334|ref|ZP_14260233.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Heidelberg
str. 41563]
gi|419738390|ref|ZP_14265154.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Heidelberg
str. 41573]
gi|419746414|ref|ZP_14273002.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Heidelberg
str. 41566]
gi|421568674|ref|ZP_16014389.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Heidelberg
str. CFSAN00322]
gi|421574939|ref|ZP_16020554.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Heidelberg
str. CFSAN00325]
gi|421577999|ref|ZP_16023581.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Heidelberg
str. CFSAN00326]
gi|421583585|ref|ZP_16029104.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Heidelberg
str. CFSAN00328]
gi|440761527|ref|ZP_20940601.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Agona str.
SH11G1113]
gi|440767079|ref|ZP_20946065.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Agona str.
SH08SF124]
gi|440773781|ref|ZP_20952672.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Agona str.
SH10GFN094]
gi|254788646|sp|B4TCA8.1|FADJ_SALHS RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|254788650|sp|B5EZR9.1|FADJ_SALA4 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|194409630|gb|ACF69849.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL476]
gi|197212629|gb|ACH50026.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
subsp. enterica serovar Agona str. SL483]
gi|197241593|gb|EDY24213.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA23]
gi|199605899|gb|EDZ04444.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
subsp. enterica serovar Virchow str. SL491]
gi|205338643|gb|EDZ25407.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL486]
gi|205344950|gb|EDZ31714.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
subsp. enterica serovar Weltevreden str. HI_N05-537]
gi|320086822|emb|CBY96594.1| enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase /
3-hydroxybutyryl-CoA epimerase [Salmonella enterica
subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
gi|381299573|gb|EIC40645.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Heidelberg
str. 41579]
gi|381300468|gb|EIC41529.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Heidelberg
str. 41563]
gi|381302612|gb|EIC43648.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Heidelberg
str. 41573]
gi|381302893|gb|EIC43923.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Heidelberg
str. 41566]
gi|383799240|gb|AFH46322.1| Fatty acid oxidation complex subunit alpha [Salmonella enterica
subsp. enterica serovar Heidelberg str. B182]
gi|402523465|gb|EJW30782.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Heidelberg
str. CFSAN00325]
gi|402525576|gb|EJW32863.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Heidelberg
str. CFSAN00326]
gi|402529751|gb|EJW36982.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Heidelberg
str. CFSAN00322]
gi|402531909|gb|EJW39111.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Heidelberg
str. CFSAN00328]
gi|436414756|gb|ELP12682.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Agona str.
SH10GFN094]
gi|436421578|gb|ELP19423.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Agona str.
SH08SF124]
gi|436424749|gb|ELP22514.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Agona str.
SH11G1113]
Length = 715
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 228/708 (32%), Positives = 359/708 (50%), Gaps = 37/708 (5%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 74 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 132
Query: 128 KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 184
KT LGLPE+ LG++PG TQRLPRLVG+S A++M+L K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDVVPQT 192
Query: 185 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 242
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 193 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 248
Query: 243 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 302
+DVIE G+ G SG EA+ F EL M S+ L VFFA K P +D P
Sbjct: 249 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAVFFASTEVKKDPG-SDAPPGP 307
Query: 303 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 362
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 308 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 366
Query: 363 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 422
+ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 367 ASERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCAAHTIFASNTSS 426
Query: 423 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 482
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 427 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 486
Query: 483 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAA 542
V + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 487 VSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVGIDTGTK 546
Query: 543 TSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DPSVLPII 597
+ A+ +R F +P +V +L R G+ NG+G Y Y EKG K K DP++ +I
Sbjct: 547 IIPVLEAAYGER-FSAPANVVASILNDDRKGRKNGRGFYLYGEKGRKSKKQVDPAIYKLI 605
Query: 598 --EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGM 655
+ RLS +++ E + ++NE+ R +E ++ A D D +V G+
Sbjct: 606 GVQGQSRLS------------AQQVAERCVMLMLNEAARCFDEKVIRSARDGDIGAVFGI 653
Query: 656 SFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATK 703
FP + GG + DA+G + +L++ + LYG + P L A +
Sbjct: 654 GFPPFLGGPFRYMDALGPGEMVATLQRLAALYGPRYAPCEQLVRMAER 701
>gi|194442472|ref|YP_002041652.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. SL254]
gi|418787698|ref|ZP_13343498.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 19447]
gi|418791598|ref|ZP_13347354.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 19449]
gi|418799986|ref|ZP_13355650.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 19567]
gi|418805351|ref|ZP_13360939.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 21550]
gi|418814079|ref|ZP_13369599.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 22513]
gi|418814562|ref|ZP_13370076.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 21538]
gi|418819526|ref|ZP_13374977.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 22425]
gi|418832306|ref|ZP_13387248.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM N18486]
gi|418838424|ref|ZP_13393268.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM N1543]
gi|418839358|ref|ZP_13394195.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 21554]
gi|418847102|ref|ZP_13401864.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 19443]
gi|418852074|ref|ZP_13406779.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 37978]
gi|254788645|sp|B4SZR0.1|FADJ_SALNS RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|194401135|gb|ACF61357.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
subsp. enterica serovar Newport str. SL254]
gi|392762616|gb|EJA19430.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 19567]
gi|392765223|gb|EJA22011.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 19447]
gi|392770747|gb|EJA27471.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 19449]
gi|392772413|gb|EJA29114.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 22513]
gi|392785052|gb|EJA41633.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 21550]
gi|392794356|gb|EJA50779.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 21538]
gi|392794817|gb|EJA51209.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 22425]
gi|392795937|gb|EJA52287.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM N1543]
gi|392797825|gb|EJA54123.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM N18486]
gi|392808865|gb|EJA64912.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 19443]
gi|392813069|gb|EJA69044.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 21554]
gi|392815604|gb|EJA71540.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 37978]
Length = 715
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 227/702 (32%), Positives = 357/702 (50%), Gaps = 37/702 (5%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 74 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 132
Query: 128 KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 184
KT LGLPE+ LG++PG TQRLPRLVG+S A++M+L K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDVVPQT 192
Query: 185 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 242
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 193 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 248
Query: 243 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 302
+DVIE G+ G SG EA+ F EL M S+ L VFFA K P +D P
Sbjct: 249 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAVFFASTEVKKDPG-SDAPPGP 307
Query: 303 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 362
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 308 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 366
Query: 363 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 422
+ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 367 ASERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCATHTIFASNTSS 426
Query: 423 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 482
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 427 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 486
Query: 483 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAA 542
V + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 487 VSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVGIDTGTK 546
Query: 543 TSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DPSVLPII 597
+ A+ +R F +P +V +L R G+ NG+G Y Y EKG K K DP++ +I
Sbjct: 547 IIPVLEAAYGER-FSAPANVVASILNDDRKGRKNGRGFYLYGEKGRKSKKQVDPAIYKLI 605
Query: 598 --EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGM 655
+ RLS +++ E + ++NE+ R +E ++ A D D +V G+
Sbjct: 606 GVQGQSRLS------------AQQVAERCVMLMLNEAARCFDEKVIRSARDGDIGAVFGI 653
Query: 656 SFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 697
FP + GG + DA+G + +L++ + LYG + P L
Sbjct: 654 GFPPFLGGPFRYMDALGPGEMVATLQRLAALYGPRYAPCEQL 695
>gi|126727316|ref|ZP_01743151.1| Enoyl-CoA hydratase/isomerase:3-hydroxyacyl-CoA dehydrogenase,
3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein
[Rhodobacterales bacterium HTCC2150]
gi|126703311|gb|EBA02409.1| Enoyl-CoA hydratase/isomerase:3-hydroxyacyl-CoA dehydrogenase,
3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein
[Rhodobacterales bacterium HTCC2150]
Length = 648
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 235/661 (35%), Positives = 347/661 (52%), Gaps = 33/661 (4%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVF---- 70
VAI+T+ NPPVNA++ + GL D ++ + +KA ++ F G DI F
Sbjct: 11 VAIVTIENPPVNAISHAVRQGLLDAKQQIEADPAIKAGIIVCADRTFIAGADIREFNTPP 70
Query: 71 QKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQ 130
++ H +PD+ + L E KKP+VAA+ G ALGGGLE+A+GC RIA +
Sbjct: 71 KEPH-------LPDLVIAL-----EGGKKPLVAAIHGTALGGGLEIALGCDYRIAINSAK 118
Query: 131 LGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELL 187
LGLPE+ LG+IPG T RL RL+ A+++M+ K ++++ LGLIDA T ++ L
Sbjct: 119 LGLPEVNLGLIPGAGGTVRLTRLISAEPALDIMISGKPVSADRAKNLGLIDA--TCDDDL 176
Query: 188 KVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDV 247
+ S A+ A R K R ++ A KL AK N P A
Sbjct: 177 QNS---AIAFANRIKDEPRPSQILTRMADYDRAALDKKLTAGAAKARGQNSPV--AVCQA 231
Query: 248 IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRK 307
+ I + + E K+F EL S L H+FFA+RATSK+ + + P V +
Sbjct: 232 VRNAIEMSAHDALAAERKLFVELKSDPQSLALRHIFFAERATSKISAIKGVPAAP--VNQ 289
Query: 308 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 367
+ +IGGG MG+GIA A +L VV+ E N E L +G+ +A + + RG +TQ K +
Sbjct: 290 IGIIGGGTMGAGIAAACLLAGFDVVMIERNDEALAQGMSRTKATLANSLKRGLITQAKHD 349
Query: 368 NALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 427
+ G + Y D D+VIEAV E + +K+ +F L++AC I ATNTS +D++
Sbjct: 350 RLIAAFTGSISYIALADADLVIEAVFEDMEIKKAVFDALDQACKADAIFATNTSYLDIDE 409
Query: 428 VGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 487
+ + T + R+IG HFFSPAH+M LLE+V T+ + I + +GK + K+ V G C
Sbjct: 410 IAQSTINPTRVIGLHFFSPAHIMKLLELVTTKTANPTAIATGVALGKRLGKITVPSGVCD 469
Query: 488 GFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEF 547
GF NR Y ++ L+ G +D+A+R FG P+G F++ DLAG +A A K
Sbjct: 470 GFIGNRIMSAYRRTCDYLIEDGALPADVDAAMRDFGFPMGIFEMQDLAGLDIAWAMRKRR 529
Query: 548 DKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIM 607
+ + D L + GR G+ G G Y YE G K DP+V +I + + I
Sbjct: 530 AATRDPQERYVDIADTLCEMGRFGRKTGSGWYQYENG-KATIDPTVTDLILQTSARNGIT 588
Query: 608 PGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFW 667
S+T EI+ IL + E+ +L+EGI A D+D V G FP ++GG +F
Sbjct: 589 RA----SMTADEIMAQILATMRTEAAAILDEGIANSADDIDVVMVNGYGFPRWKGGPLFM 644
Query: 668 A 668
A
Sbjct: 645 A 645
>gi|411009212|ref|ZP_11385541.1| multifunctional fatty acid oxidation complex subunit alpha
[Aeromonas aquariorum AAK1]
Length = 707
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 241/725 (33%), Positives = 373/725 (51%), Gaps = 45/725 (6%)
Query: 1 MAAPRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDD-VKAIVLTGN 57
M+ ++ V DG+ I+T+ P +N L V ++ E + + + +V++G
Sbjct: 1 MSEKTFSLAVRQDGIGILTMDVPGESMNTLKAAFVDEIRAVLAEVKANKELIGLVVVSGK 60
Query: 58 GGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELA 117
F G DI++ A D + +++ IE P++AA+ G LGGGLELA
Sbjct: 61 KDSFIAGADISMLAACTSAKDAETLSREG-QVIFAEIESLPIPVIAAIHGPCLGGGLELA 119
Query: 118 MGCHARIAAP--KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGW 172
+ CH R+ KT LGLPE+ LG++PG TQRLPRL+G++KA+++ML K + +++
Sbjct: 120 LACHGRVVTDHGKTVLGLPEVQLGLLPGSGGTQRLPRLIGVAKALDLMLTGKQVRAKQAK 179
Query: 173 KLGLIDAVVTSEELLKVSRLWALDIAARRKP---WIRSLH----RTDKLGS---LSEARE 222
KLGL+D VV LL+ A+ +A + KP R L T+KLG +AR+
Sbjct: 180 KLGLVDDVVPPSILLEA----AIKLAKKGKPRHELKRDLQGKLLETNKLGRKVLFDQARK 235
Query: 223 VLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHV 282
+K KT N P + L+V+ G+ G +G+ E++ F ELVM S L +
Sbjct: 236 GVK------AKTRGNYPAPELILEVVRIGVEEGMQAGLAAESRHFGELVMTSESAALRSI 289
Query: 283 FFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYL 341
FFA K VT G +PR V AV+GGGLMG GIA + V +K+V S +
Sbjct: 290 FFATTEMKK--EVTYQGAEPRKVGHAAVLGGGLMGGGIAFVTATKAGVPVRIKDVASAGI 347
Query: 342 LKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQK 401
++ + + R + + + + +L G LDYS F VDMV+EAV E + LK +
Sbjct: 348 GNAMRYSYDILAKKLKRRHILRSELEKQMSLLTGTLDYSGFHRVDMVVEAVFEDLNLKHQ 407
Query: 402 IFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERT 461
+ ++E+ C H + A+NTS++ ++ + + +R++G H+FSP MPL EI+ T
Sbjct: 408 MVKDVERECGEHTVFASNTSSLPIHQIASAAAHPERVVGLHYFSPVDKMPLAEIIPHAGT 467
Query: 462 SAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRS 521
SA+ + + + K P+VV + GF VNR PY A LV G V +D A+
Sbjct: 468 SAETVATTLAFARAQGKTPIVVKDEAGFYVNRILAPYMNEAARLVLEGEPVEVLDGALLD 527
Query: 522 FGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLV-DLLLKSGRNGKANGKGLYT 580
FG P+GP LLD G V A S +K FQ+P D LL++ R G+ NGKG Y
Sbjct: 528 FGFPVGPITLLDEVGIDVGAKISPILEKELGGERFQAPAAFDKLLQNDRKGRKNGKGFYL 587
Query: 581 YEKGSKPKP--DPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 638
Y K +K K D SV ++ + P K + EI E + ++NE+ L+
Sbjct: 588 YGKAAKGKKKVDDSVYGVL-------GVSPQAKQ---AKAEIAERCVLMMLNEAAMALDS 637
Query: 639 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLE 698
G+V A D D ++ G+ FP + GG + D++G ++ L+ + + YG+ F P L+
Sbjct: 638 GVVASARDGDIGAIFGIGFPPFLGGPFRYMDSLGIEHLVARLEHYQKRYGDRFAPCDRLK 697
Query: 699 ERATK 703
A +
Sbjct: 698 AMAAE 702
>gi|16761312|ref|NP_456929.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhi str.
CT18]
gi|29140992|ref|NP_804334.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhi str.
Ty2]
gi|213160943|ref|ZP_03346653.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhi str.
E00-7866]
gi|213611232|ref|ZP_03370058.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhi str.
E98-2068]
gi|213650422|ref|ZP_03380475.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhi str.
J185]
gi|213852450|ref|ZP_03381982.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhi str.
M223]
gi|289826758|ref|ZP_06545703.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhi str.
E98-3139]
gi|378958622|ref|YP_005216108.1| 3-hydroxyacyl-CoA dehydrogenase [Salmonella enterica subsp.
enterica serovar Typhi str. P-stx-12]
gi|81513527|sp|Q8Z4Z0.1|FADJ_SALTI RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|25291855|pir||AB0805 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16503611|emb|CAD07620.1| putative fatty acid oxidation complex alpha subunit [Salmonella
enterica subsp. enterica serovar Typhi]
gi|29136617|gb|AAO68183.1| putative fatty acid oxidation complex alpha subunit [Salmonella
enterica subsp. enterica serovar Typhi str. Ty2]
gi|374352494|gb|AEZ44255.1| 3-hydroxyacyl-CoA dehydrogenase [Salmonella enterica subsp.
enterica serovar Typhi str. P-stx-12]
Length = 715
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 227/702 (32%), Positives = 357/702 (50%), Gaps = 37/702 (5%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 74 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 132
Query: 128 KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 184
KT LGLPE+ LG++PG TQRLPRLVG+S A++M+L K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDVVPQT 192
Query: 185 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 242
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 193 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 248
Query: 243 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 302
+DVIE G+ G SG EA+ F EL M S+ L VFFA K P +D P
Sbjct: 249 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAVFFASTEVKKDPG-SDAPPGP 307
Query: 303 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 362
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 308 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 366
Query: 363 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 422
+ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 367 ASERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCATHTIFASNTSS 426
Query: 423 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 482
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 427 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 486
Query: 483 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAA 542
V + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 487 VSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVGIDTGTK 546
Query: 543 TSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DPSVLPII 597
+ A+ +R F +P +V +L R G+ NG+G Y Y EKG K K DP++ +I
Sbjct: 547 IIPVLEAAYGER-FSAPANVVASILNDDRKGRKNGRGFYLYGEKGRKSKKQVDPAIYKLI 605
Query: 598 --EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGM 655
+ RLS +++ E + ++NE+ R +E ++ A D D +V G+
Sbjct: 606 GVQGQSRLS------------AQQVAERCVMLMLNEAARCFDEKVIRSARDGDIGAVFGI 653
Query: 656 SFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 697
FP + GG + DA+G + +L++ + LYG + P L
Sbjct: 654 GFPPFLGGPFRYMDALGPGEMVATLQRLAALYGPRYAPCEQL 695
>gi|418511711|ref|ZP_13077962.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Pomona str.
ATCC 10729]
gi|366084561|gb|EHN48469.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Pomona str.
ATCC 10729]
Length = 715
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 226/702 (32%), Positives = 357/702 (50%), Gaps = 37/702 (5%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 74 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 132
Query: 128 KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 184
KT LGLPE+ LG++PG TQRLPRLVG+S A++M+L K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDVVPQT 192
Query: 185 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 242
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 193 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 248
Query: 243 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 302
+DVIE G+ G SG EA+ F EL M S+ L +FFA K P +D P
Sbjct: 249 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAIFFASTEVKKDPG-SDAPPGP 307
Query: 303 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 362
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 308 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 366
Query: 363 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 422
+ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 367 ASERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCAAHTIFASNTSS 426
Query: 423 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 482
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 427 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 486
Query: 483 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAA 542
V + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 487 VSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVGIDTGTK 546
Query: 543 TSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DPSVLPII 597
+ A+ +R F +P +V +L R G+ NG+G Y Y EKG K K DP++ +I
Sbjct: 547 IIPVLEAAYGER-FSAPANVVASILNDDRKGRKNGRGFYLYGEKGRKSKKQVDPAIYKLI 605
Query: 598 --EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGM 655
+ RLS +++ E + ++NE+ R +E ++ A D D +V G+
Sbjct: 606 GVQGQSRLS------------AQQVAERCVMLMLNEAARCFDEKVIRSARDGDIGAVFGI 653
Query: 656 SFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 697
FP + GG + DA+G + +L++ + LYG + P L
Sbjct: 654 GFPPFLGGPFRYMDALGPGEMVATLQRLAALYGPRYAPCEQL 695
>gi|152995606|ref|YP_001340441.1| multifunctional fatty acid oxidation complex subunit alpha
[Marinomonas sp. MWYL1]
gi|150836530|gb|ABR70506.1| fatty oxidation complex, alpha subunit FadB [Marinomonas sp. MWYL1]
Length = 716
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 227/713 (31%), Positives = 345/713 (48%), Gaps = 30/713 (4%)
Query: 6 VTMEVGNDGVAIITL--INPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSG 63
V + V + GVA +TL + VN + L + DD++ ++ F
Sbjct: 8 VKVAVDDAGVATVTLDLVGESVNKFNSLTLNELAEAVTALKHIDDLQGVIFASAKDVFVV 67
Query: 64 GFDINVFQKVHGAGDVSLMPDV-SVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHA 122
G DI F D L + + N I + P VAA+ G+ALGGG+ELA+ C
Sbjct: 68 GADITEFTSWFKLEDDDLADKLRHAHSIFNDISNLCCPTVAAINGIALGGGMELALACDY 127
Query: 123 RIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDA 179
R+ A ++GLPE LG+ PG T RLPRL+G A E + SE+ +K G +DA
Sbjct: 128 RVMADTAKIGLPETQLGIYPGWGGTVRLPRLIGADNACEWICGGAQKRSEDAFKDGAVDA 187
Query: 180 VVTSEELLKVSRLW-------ALDIAARRKPWIRSLHRT--DKLGSLSEAREVLKLARLQ 230
VV + ++ + +R L+ ARR + T +K+ R V+
Sbjct: 188 VVPAAKVNESARHLIQQVLDGKLNYHARRDELRAPMEFTPIEKMMVFESVRGVV------ 241
Query: 231 AKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATS 290
K + P A + IE+GI + E K F +L ++ LV++F + +
Sbjct: 242 GAKAGKHYPAPMAAIKTIEKGISQDMEKALDTEIKGFIKLAKGPVAKSLVNLFLSDQQIK 301
Query: 291 KVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEA 350
K P V++ AV+G G+MG G+A +++K++ E L G+
Sbjct: 302 KTAGRYAKNATP--VKQAAVLGAGIMGGGVAYQSASKGTPIIMKDIRPEALELGLSEANK 359
Query: 351 NVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKAC 410
G V RG+LT +KA A+ + L Y EF+ VD+V+EAV+E+V +K+ + +E+E
Sbjct: 360 LFNGQVERGRLTTEKAFKAMNAIIPALSYGEFEHVDLVVEAVVENVKIKKSVLAEVETKI 419
Query: 411 PPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLM 470
IL +NTSTI + + + + G HFF+P H MPL+E++R E+TS I +
Sbjct: 420 SDDAILTSNTSTISITELAKDLKRPENFCGMHFFNPVHRMPLVEVIRGEKTSDAAIAKTV 479
Query: 471 TVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 530
+ + K PVVV +C GF VNR FPY L++ G D +D + FG P+GP
Sbjct: 480 AYAQAMGKTPVVVNDCPGFLVNRVLFPYFAGFSLMMQEGADFQVVDKTMEKFGWPMGPAY 539
Query: 531 LLDLAGYGVAAATSKEFDKAFPDRSFQ--SPLVDLLLKSGRNGKANGKGLYTYEKGSKPK 588
LLD+ G A + + FPDR + VD L + R G+ NGKG YTYE K K
Sbjct: 540 LLDVVGIDTAYHADQVMAEGFPDRMKHEGTNAVDCLFELERFGQKNGKGFYTYEPDRKGK 599
Query: 589 PDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLD 648
P I+ LS+I+ +S E +IV ++ P+ E+ R LEE IV A++ D
Sbjct: 600 PKKIFNEEIDVL--LSSIVVSKSELS--EDDIVARMMIPLCIETVRCLEENIVASAAEAD 655
Query: 649 DASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERA 701
+ G+ FP Y GG + + D +G K+S L G ++P+ + E A
Sbjct: 656 MGLIYGIGFPPYLGGALHYLDQMGLQAFCDLADKYSHL-GKLYEPTAKMREMA 707
>gi|161612873|ref|YP_001586838.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Paratyphi B
str. SPB7]
gi|189044423|sp|A9N453.1|FADJ_SALPB RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|161362237|gb|ABX66005.1| hypothetical protein SPAB_00579 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
Length = 715
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 227/708 (32%), Positives = 359/708 (50%), Gaps = 37/708 (5%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 74 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 132
Query: 128 KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 184
KT LGLPE+ LG++PG TQRLPRLVG+S A++M+L K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDVVPQT 192
Query: 185 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 242
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 193 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 248
Query: 243 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 302
+DVIE G+ G SG EA+ F EL M S+ L +FFA K P +D P
Sbjct: 249 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAIFFASTEVKKDPG-SDAPPGP 307
Query: 303 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 362
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 308 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 366
Query: 363 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 422
+ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 367 ASERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCAAHTIFASNTSS 426
Query: 423 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 482
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 427 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 486
Query: 483 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAA 542
V + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 487 VSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVGIDTGTK 546
Query: 543 TSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DPSVLPII 597
+ A+ +R F +P +V +L R G+ NG+G Y Y EKG K K DP++ +I
Sbjct: 547 IIPVLEAAYGER-FSAPANVVASILNDDRKGRKNGRGFYLYGEKGRKSKKQVDPAIYKLI 605
Query: 598 --EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGM 655
+ RLS +++ E + ++NE+ R +E ++ A D D +V G+
Sbjct: 606 GVQGQSRLS------------AQQVAERCVMLMLNEAARCFDEKVIRSARDGDIGAVFGI 653
Query: 656 SFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATK 703
FP + GG + DA+G + +L++ + LYG + P L A +
Sbjct: 654 GFPPFLGGPFRYMDALGPGEMVATLQRLAALYGPRYAPCEQLVRMAER 701
>gi|402841335|ref|ZP_10889788.1| fatty oxidation complex, alpha subunit FadJ [Klebsiella sp. OBRC7]
gi|402283357|gb|EJU31873.1| fatty oxidation complex, alpha subunit FadJ [Klebsiella sp. OBRC7]
Length = 714
Score = 332 bits (851), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 226/715 (31%), Positives = 356/715 (49%), Gaps = 38/715 (5%)
Query: 8 MEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVK-AIVLTGNGGRFSGG 64
+EV D +A+IT+ P +N L + ++ + +++ A+ ++ F G
Sbjct: 9 LEVRPDNIAVITIDAPGEKMNTLKAEFASEVRGIIRQIRDNKELRGAVFISAKADNFIAG 68
Query: 65 FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
DIN+ + H A + + +++ I P++AA+ G LGGGLELA+ CH R+
Sbjct: 69 ADINMIARCHSAEEAEALARQGQQIMAE-IHGLSIPVIAAIHGACLGGGLELALACHGRV 127
Query: 125 AAP--KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDA 179
+ KT+LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + + K GL+D
Sbjct: 128 CSDDDKTRLGLPEVQLGLLPGSGGTQRLPRLIGVSGALEMILTGKQLRPRQALKAGLVDE 187
Query: 180 VVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPN 237
VV LL+ A+++A + +P R++ +++ G L + +A+ KT N
Sbjct: 188 VVPQTILLQT----AIELALKGRPASRTVPARERILAGPLGCSLLFRLVAKKTHHKTQGN 243
Query: 238 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 297
P + L VIE G+ G SG +EA+ F EL M S+ L +FFA K D
Sbjct: 244 YPATERILQVIETGLAQGCSSGYAEEARAFGELAMTPQSQALRSIFFASTDLKK-----D 298
Query: 298 IGLKPRGVRKVAVIGGGLMGSGIATAHIL---NNIYVVLKEVNSEYLLKGIKTIEANVRG 354
G V +V G G A++ + V +K++ + +K +
Sbjct: 299 RGADAEPVALRSVGILGGGLMGGGIAYVTACKGGLPVRIKDIQPRGINHALKYSWDLLDK 358
Query: 355 LVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHC 414
V R L + + ++ G LDY F D+VIEAV E + LKQK+ SE+E+ C P
Sbjct: 359 QVRRRYLRASERERQMGLISGSLDYQGFAHRDVVIEAVFEDLALKQKMVSEVEQYCSPET 418
Query: 415 ILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGK 474
I A+NTS++ + + S R+IG HFFSP MPL+E++ T Q I + + K
Sbjct: 419 IFASNTSSLPIGEIAAHASRPQRVIGLHFFSPVDKMPLVEVIPHSGTDRQTIATAVKLAK 478
Query: 475 IIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDL 534
+ K P+VV + GF VNR PY A L+ G V ID+A+ FG P+GP QLLD
Sbjct: 479 LQGKTPIVVADKAGFYVNRILAPYINEAMRLLMEGEPVEHIDNALVKFGFPVGPIQLLDE 538
Query: 535 AGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTYE---KGSKPKP 589
G + A+ +R F P ++ +L R G+ N +G Y Y + SK +P
Sbjct: 539 VGIDTGTKIIPVLEAAWGER-FSPPANIISSILNDDRKGRKNNRGFYLYAAKGRKSKKRP 597
Query: 590 DPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
DP++ + L P + ++ +++ E + ++NE+ R +E +V A D D
Sbjct: 598 DPAIYTL------LGISSPQAR---LSAQQVAERCMMMMLNEAARCFDERVVRSARDGDI 648
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D +GA V L++ + YG F P L A +G
Sbjct: 649 GAVFGIGFPPFLGGPFRYMDTLGAGEVAAILQRLAVQYGPRFTPCDTLLHMAEQG 703
>gi|167549603|ref|ZP_02343362.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA29]
gi|205325346|gb|EDZ13185.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA29]
Length = 715
Score = 332 bits (851), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 226/702 (32%), Positives = 357/702 (50%), Gaps = 37/702 (5%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 74 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 132
Query: 128 KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 184
KT LGLPE+ LG++PG TQRLPRLVG+S A++M+L K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDVVPQT 192
Query: 185 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 242
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 193 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 248
Query: 243 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 302
+DVIE G+ G SG EA+ F EL M S+ L +FFA K P +D P
Sbjct: 249 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAIFFASTEVKKDPG-SDAPPGP 307
Query: 303 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 362
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 308 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 366
Query: 363 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 422
+ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 367 ASERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCAAHTIFASNTSS 426
Query: 423 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 482
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 427 LPIGDIAANAARPEQVIGLHFFSPVEKMPLIEVIPHASTSAQTIATTVKLAKKQGKTPIV 486
Query: 483 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAA 542
V + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 487 VSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVGIDTGTK 546
Query: 543 TSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DPSVLPII 597
+ A+ +R F +P +V +L R G+ NG+G Y Y EKG K K DP++ +I
Sbjct: 547 IIPVLEAAYGER-FSAPANVVASILNDDRKGRKNGRGFYLYGEKGRKSKKQVDPAIYKLI 605
Query: 598 --EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGM 655
+ RLS +++ E + ++NE+ R +E ++ A D D +V G+
Sbjct: 606 GVQGQSRLS------------AQQVAERCVMLMLNEAARCFDEKVIRSARDGDIGAVFGI 653
Query: 656 SFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 697
FP + GG + DA+G + +L++ + LYG + P L
Sbjct: 654 GFPPFLGGPFRYMDALGPGEMVATLQRLAALYGPRYAPCEQL 695
>gi|161502467|ref|YP_001569579.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
str. RSK2980]
gi|160863814|gb|ABX20437.1| hypothetical protein SARI_00511 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
Length = 714
Score = 332 bits (851), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 231/721 (32%), Positives = 368/721 (51%), Gaps = 37/721 (5%)
Query: 1 MAAPRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGN 57
M T+ V D VA++++ P VN L A + ++ ++ +V ++
Sbjct: 1 MTTSAFTLNVRLDNVAVVSIDVPGEKVNTLKAEFAAQARAILKQIRENKVLQGVVFISAK 60
Query: 58 GGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELA 117
F G DIN+ + A + + +L+ I+ P++AA+ G LGGGLE+A
Sbjct: 61 ADNFIAGADINMIGRCQSAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMA 119
Query: 118 MGCHARIAAP--KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGW 172
+ CH RI KT LGLPE+ LG++PG TQRLPRLVG+S A++M+L K + + +
Sbjct: 120 LACHRRICTDDVKTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQAL 179
Query: 173 KLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVL-KLARLQ- 230
K GL+D VV LL+ A+++A + + R+L +++ + + R +L +L R +
Sbjct: 180 KTGLVDDVVPQTILLEA----AVELAKKDRLAQRTLPVRERILAGALGRTLLFRLVRKKT 235
Query: 231 AKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATS 290
A+KT N P + +DVIE G+ G +G EA F EL M S+ L ++FFA
Sbjct: 236 AQKTQGNYPATERIIDVIETGLAQGSGNGYDAEACAFGELAMTPQSQALRNLFFASTQVK 295
Query: 291 KVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEA 350
K P +D P + G G + TA + V +K++N++ + +K
Sbjct: 296 KDPG-SDAPSGPLNSVGILGGGLMGGGIALVTA-CKGGLPVRIKDINAKGINHALKYSWD 353
Query: 351 NVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKAC 410
+ V R + + + L ++ G DY F D++IEAV E + LKQ++ +E+E+ C
Sbjct: 354 QLETKVRRRHIKASERDKQLALISGSTDYRGFSHRDLIIEAVFEDLSLKQQMVAEVEQNC 413
Query: 411 PPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLM 470
H I A+NTS++ + + +++IG HFFSP MPL+E++ TSAQ I +
Sbjct: 414 ASHTIFASNTSSLPIGDIAAYAGRPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTV 473
Query: 471 TVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 530
+ K K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP Q
Sbjct: 474 KLAKKQGKTPIVVSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQ 533
Query: 531 LLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKG--S 585
LLD G + A+ +R F +P +V +L GR G+ NG+G Y Y EKG S
Sbjct: 534 LLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVASILNDGRKGRKNGRGFYLYGEKGRES 592
Query: 586 KPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVR 643
K K D ++ +I + RLS ++ E + ++NE+ R +E ++
Sbjct: 593 KKKVDNAIYKVIGVQGQSRLS------------AHQVAERCVMLMLNEAARCFDEKVIRS 640
Query: 644 ASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATK 703
A D D +V G+ FP + GG + DA+G V +L++ + LYG + P L A +
Sbjct: 641 ARDGDIGAVFGIGFPPFLGGPFRYMDALGPGEVVATLQRLAALYGPRYAPCEQLMRMAER 700
Query: 704 G 704
G
Sbjct: 701 G 701
>gi|375002207|ref|ZP_09726547.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
subsp. enterica serovar Infantis str. SARB27]
gi|353076895|gb|EHB42655.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
subsp. enterica serovar Infantis str. SARB27]
Length = 715
Score = 332 bits (851), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 226/702 (32%), Positives = 357/702 (50%), Gaps = 37/702 (5%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 74 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 132
Query: 128 KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 184
KT LGLPE+ LG++PG TQRLPRLVG+S A++M+L K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDVVPQT 192
Query: 185 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 242
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 193 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 248
Query: 243 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 302
+DVIE G+ G SG EA+ F EL M S+ L +FFA K P +D P
Sbjct: 249 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAIFFASTEVKKDPG-SDAPPGP 307
Query: 303 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 362
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 308 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 366
Query: 363 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 422
+ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 367 ASERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCATHTIFASNTSS 426
Query: 423 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 482
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 427 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 486
Query: 483 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAA 542
V + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 487 VSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVGIDTGTK 546
Query: 543 TSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DPSVLPII 597
+ A+ +R F +P +V +L R G+ NG+G Y Y EKG K K DP++ +I
Sbjct: 547 IIPVLEAAYGER-FSAPANVVASILNDDRKGRKNGRGFYLYGEKGRKSKKQVDPAIYKLI 605
Query: 598 --EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGM 655
+ RLS +++ E + ++NE+ R +E ++ A D D +V G+
Sbjct: 606 GVQGQSRLS------------AQQVAERCVMLMLNEAARCFDEKVIRSARDGDIGAVFGI 653
Query: 656 SFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 697
FP + GG + DA+G + +L++ + LYG + P L
Sbjct: 654 GFPPFLGGPFRYMDALGPGEMVATLQRLAALYGPRYAPCEQL 695
>gi|62180960|ref|YP_217377.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|375115294|ref|ZP_09760464.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar
Choleraesuis str. SCSA50]
gi|75481934|sp|Q57LW6.1|FADJ_SALCH RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|62128593|gb|AAX66296.1| paral putative dehydrogenase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|322715440|gb|EFZ07011.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar
Choleraesuis str. SCSA50]
Length = 715
Score = 332 bits (851), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 227/708 (32%), Positives = 359/708 (50%), Gaps = 37/708 (5%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 74 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 132
Query: 128 KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 184
KT LGLPE+ LG++PG TQRLPRLVG+S A++M+L K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDVVPQT 192
Query: 185 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 242
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 193 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 248
Query: 243 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 302
+DVIE G+ G SG EA+ F EL M S+ L +FFA K P +D P
Sbjct: 249 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAIFFASTKVKKDPG-SDAPPGP 307
Query: 303 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 362
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 308 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 366
Query: 363 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 422
+ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 367 ASERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCAAHTIFASNTSS 426
Query: 423 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 482
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 427 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 486
Query: 483 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAA 542
V + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 487 VSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVGIDTGTK 546
Query: 543 TSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DPSVLPII 597
+ A+ +R F +P +V +L R G+ NG+G Y Y EKG K K DP++ +I
Sbjct: 547 IIPVLEAAYGER-FSAPANVVASILNDDRKGRKNGRGFYLYGEKGRKSKKQVDPAIYKLI 605
Query: 598 --EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGM 655
+ RLS +++ E + ++NE+ R +E ++ A D D +V G+
Sbjct: 606 GVQGQSRLS------------AQQVAERCVMLMLNEAARCFDEKVIRSARDGDIGAVFGI 653
Query: 656 SFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATK 703
FP + GG + DA+G + +L++ + LYG + P L A +
Sbjct: 654 GFPPFLGGPFRYMDALGPGEMVATLQRLAALYGPRYAPCEQLVRMAER 701
>gi|204928988|ref|ZP_03220131.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
subsp. enterica serovar Javiana str. GA_MM04042433]
gi|452123787|ref|YP_007474035.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Javiana
str. CFSAN001992]
gi|204321532|gb|EDZ06731.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
subsp. enterica serovar Javiana str. GA_MM04042433]
gi|451912791|gb|AGF84597.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Javiana
str. CFSAN001992]
Length = 715
Score = 332 bits (851), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 226/702 (32%), Positives = 357/702 (50%), Gaps = 37/702 (5%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 74 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 132
Query: 128 KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 184
KT LGLPE+ LG++PG TQRLPRLVG+S A++M+L K + + + K GL+D VV
Sbjct: 133 KTILGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDVVPQT 192
Query: 185 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 242
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 193 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 248
Query: 243 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 302
+DVIE G+ G SG EA+ F EL M S+ L +FFA K P +D P
Sbjct: 249 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAIFFASTEVKKDPG-SDAPPGP 307
Query: 303 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 362
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 308 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 366
Query: 363 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 422
+ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 367 ASERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCATHTIFASNTSS 426
Query: 423 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 482
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 427 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 486
Query: 483 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAA 542
V + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 487 VSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVGIDTGTK 546
Query: 543 TSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DPSVLPII 597
+ A+ +R F +P +V +L R G+ NG+G Y Y EKG K K DP++ +I
Sbjct: 547 IIPVLEAAYGER-FSAPANVVASILNDDRKGRKNGRGFYLYGEKGRKSKKQVDPAIYKLI 605
Query: 598 --EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGM 655
+ RLS +++ E + ++NE+ R +E ++ A D D +V G+
Sbjct: 606 GVQGQSRLS------------AQQVAERCVMLMLNEAARCFDEKVIRSARDGDIGAVFGI 653
Query: 656 SFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 697
FP + GG + DA+G + +L++ + LYG + P L
Sbjct: 654 GFPPFLGGPFRYMDALGPGEMVATLQRLAALYGPRYAPCEQL 695
>gi|146278866|ref|YP_001169025.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Rhodobacter
sphaeroides ATCC 17025]
gi|145557107|gb|ABP71720.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Rhodobacter sphaeroides ATCC 17025]
Length = 673
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 233/668 (34%), Positives = 339/668 (50%), Gaps = 51/668 (7%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
D +A++TL NPPVNAL + L E + D V+A+VLTG G F GG DI F +
Sbjct: 12 DQIALLTLANPPVNALGRAVRQKLAALASELEADDSVRAVVLTGEGRVFVGGADIGEFDR 71
Query: 73 VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLG 132
+ +PDV + IE +KP VAA+ G ALGGG ELA+GCH RI A + +LG
Sbjct: 72 PP---EEPHLPDV-----IAAIEAARKPWVAALNGAALGGGAELALGCHYRIFAKEARLG 123
Query: 133 LPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 189
LPE LG+IPG TQRLPR +GL+ AIE++ ++++++E GL D
Sbjct: 124 LPETALGLIPGAGGTQRLPRRIGLAPAIEVITAGRTLSADEAQDAGLAD----------- 172
Query: 190 SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLA----------RLQAKKTAPNMP 239
R+ A D+ A + + R+L G L + LA R + K A P
Sbjct: 173 -RIAAGDLIAEAQAFARTLD-----GPLPQPAGAASLADPGPAFWEEARARIAKAARGNP 226
Query: 240 QHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIG 299
A L+ I G+ G +G+ E + F L D + L H+FFA+RA + + I
Sbjct: 227 APVAALEAIHVGVTEGFAAGLRAERETFLRLRGSDEAAALRHLFFAERAAVRPAALRSI- 285
Query: 300 LKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRG 359
+P + ++ VIGGG MGSGIA A + L E + L GIK + A VTRG
Sbjct: 286 -EPAPMARIGVIGGGTMGSGIAAAIAAAGLEATLAETGPDALEAGIKRVRAIFEAQVTRG 344
Query: 360 KLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATN 419
+ A + L + G + D D+VIEAV E + +K+++F +L + C P ILATN
Sbjct: 345 LTDRAGAADRLARVSGTVGLGPLADCDLVIEAVFEDLAVKRRVFEDLTRLCRPDAILATN 404
Query: 420 TSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKV 479
TS +D + + DR I HFFSPA VM LLEIV T+++ + + + K+
Sbjct: 405 TSYLDPERIVAGLPNPDRFIALHFFSPAQVMKLLEIVPLVATTSRTLATGFALAARLGKI 464
Query: 480 PVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGV 539
PV GN GF NR Y A L+ G +D A+R+FG +GPF++ D+AG +
Sbjct: 465 PVQAGNGEGFIGNRILKRYRAEAEALLFAGASPSEVDQAMRAFGFGMGPFEMQDMAGLDI 524
Query: 540 AAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIE 598
A + D + P D L+++GR G+ +G G Y Y S+ P P V +I
Sbjct: 525 AFRAREAARAQGHDLP-EGP-GDRLVRAGRLGRKSGGGWYDYAPESRQPHPSAEVAALIA 582
Query: 599 ECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFP 658
+ P +P ++ EI E ++ + E R+ +EG+ +D+D V G FP
Sbjct: 583 PL-----VTPRPRPSAM---EIAERLIGAMAEEGQRICDEGLAQGPADIDLVEVHGYGFP 634
Query: 659 SYRGGIVF 666
++GG +F
Sbjct: 635 RHKGGPMF 642
>gi|365108571|ref|ZP_09336430.1| fatty acid oxidation complex subunit alpha [Citrobacter freundii
4_7_47CFAA]
gi|363640465|gb|EHL79936.1| fatty acid oxidation complex subunit alpha [Citrobacter freundii
4_7_47CFAA]
Length = 715
Score = 332 bits (850), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 225/716 (31%), Positives = 364/716 (50%), Gaps = 33/716 (4%)
Query: 3 APRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGG 59
A T+ V D VA++T+ P +N L + ++ ++ ++ +V ++
Sbjct: 4 ASAFTLNVRLDNVAVVTIDVPGEKMNTLKAEFASQVRAILKQIRDNKALRGVVFISAKPD 63
Query: 60 RFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMG 119
F G DIN+ A + + +++ I P++AA+ G LGGGLE+A+
Sbjct: 64 NFIAGADINMIGSCRSAQEAETLARQGQQMMAE-INALPIPVIAAIHGACLGGGLEMALA 122
Query: 120 CHARIAAP--KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKL 174
CH RI KT LGLPE+ LG++PG TQRLPRL+G+S A++M+L K + +++ K+
Sbjct: 123 CHNRICTDDVKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALDMILTGKQLRAKQALKV 182
Query: 175 GLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAK 232
GL+D VV LL+ A+++A + R+L +++ G L A ++ +
Sbjct: 183 GLVDEVVPHSILLEA----AVELAKKDSSAHRTLPVRERVLAGPLGRALLFRMASKKTVQ 238
Query: 233 KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 292
KT N P + L+VIE G+ G SG EA F EL M S+ L H+FFA K
Sbjct: 239 KTQGNYPATERILEVIETGLAQGSSSGYDAEASAFGELAMTSQSQALRHIFFANTDVKKD 298
Query: 293 PNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANV 352
P +D P + G G TA + V +K++N++ + +K +
Sbjct: 299 PG-SDAKPGPLNSVGILGGGLMGGGIAYVTA-CKGGLPVRIKDINAKGINHALKYSWDQL 356
Query: 353 RGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPP 412
V R + + + L ++ G +DY F D++IEAV E + LKQ++ +E+E+ C P
Sbjct: 357 ETKVRRRHIKASERDKQLALISGTIDYRGFAHRDLIIEAVFEDLSLKQRMVAEVEQNCAP 416
Query: 413 HCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTV 472
H I A+NTS++ ++ + + +++IG HFFSP MPL+E++ TS Q I + +
Sbjct: 417 HTIFASNTSSLPISDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHATTSEQTIATTVKL 476
Query: 473 GKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLL 532
K K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLL
Sbjct: 477 AKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVETIDAALVKFGFPVGPIQLL 536
Query: 533 DLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP 589
D G + A+ +R F +P +V +L R G+ NG+G Y Y KG K K
Sbjct: 537 DEVGIDTGTKIIPVLEAAYGER-FSAPANVVASILNDDRKGRKNGRGFYLYGAKGRKSKK 595
Query: 590 --DPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDL 647
DP++ +I + G+ ++ ++ E + ++NE+ R +E IV A D
Sbjct: 596 QVDPAIYTLI-------GVQGQGR---LSAAQVAERCVMLMLNEAARCFDEKIVRSARDG 645
Query: 648 DDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATK 703
D +V G+ FP + GG + D++GA V L++ + YG+ F P L + A +
Sbjct: 646 DIGAVFGIGFPPFLGGPFRYMDSLGAGEVVAVLQRLTTQYGSRFTPCEQLLQMAER 701
>gi|170593881|ref|XP_001901692.1| hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A
thiolase/enoyl-Coenzyme A hydratase [Brugia malayi]
gi|158590636|gb|EDP29251.1| hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A
thiolase/enoyl-Coenzyme A hydratase, putative [Brugia
malayi]
Length = 728
Score = 332 bits (850), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 232/733 (31%), Positives = 370/733 (50%), Gaps = 56/733 (7%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKA-----IVLTGNGGR 60
VT+++ D VA++ + P NA + + D SR D A ++++G
Sbjct: 10 VTLKI-EDNVAVVKIDLP--NAKENVLNEAVADDLRYCMSRIDADASIKGVVIISGKPNT 66
Query: 61 FSGGFDINVFQKVHGAGDV-SLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMG 119
F G DI + K + D + D + + IE+ ++P+VAA+ G +GGGLELA+
Sbjct: 67 FIAGADIEMLSKCKSSADARKISSDAQRDFL--QIENSQRPVVAAIMGTCMGGGLELALA 124
Query: 120 CHARIA--APKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKL 174
CH RIA PKT LPE+ LG++PG TQRLP+LV +++A+ MML K++++ + K+
Sbjct: 125 CHYRIAMNVPKTLFALPEVKLGLLPGAGGTQRLPKLVSITEALGMMLTGKTLSAIKAKKI 184
Query: 175 GLIDAVVT----------SEELLKVSRLWALDIAARRKPWIRS----LHRTDKLGSLSEA 220
GLID VV + ++ L++ R W ++ L RT
Sbjct: 185 GLIDRVVQPIGAGVKPAEDNNYDYLEQMSVLEVNRRGSLWEKTTNYVLTRTPIFKHF--- 241
Query: 221 REVLKLARLQAKK-TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGL 279
+LK AR K T N P LDVIE G+ G G ++E++ F +L + L
Sbjct: 242 --ILKKARENVTKMTFGNYPAPLKILDVIESGVTRGPDLGYMEESEAFGDLTQTTQCKAL 299
Query: 280 VHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSE 339
+ +F + + G + + + K+A+IG GLMG+GIA I +I L + + E
Sbjct: 300 IGIFKGRTECRR----NKFG-EAKKIDKLAIIGAGLMGAGIANVSIDKDIQTYLLDRDDE 354
Query: 340 YLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLK 399
L +G I + G+V R K+T + + + LK Y + D D+ IEAV E +PLK
Sbjct: 355 GLARGQNQIHKHYDGMVKRKKITDYQRHKFMANLKTTCTYDDLHDCDVAIEAVFEELPLK 414
Query: 400 QKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTE 459
I +LE P HCI+A+NTS + + + ++ +RIIG H+FSP M LLEI+ T+
Sbjct: 415 HGIIKKLESVVPEHCIIASNTSALPITEIASASTRPERIIGMHYFSPVERMELLEIITTK 474
Query: 460 RTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAI 519
TS + I + +G K+ VVV +C GF V R P L+ GV ID
Sbjct: 475 DTSKETIAVAVQLGLTQNKLVVVVKDCPGFFVVRCLAPMMSEVVRLLQEGVYPDEIDQMT 534
Query: 520 RSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKANGKG 577
+ +G P+G L D G VA +K +A R ++D ++ SG G+ +GKG
Sbjct: 535 KQYGFPVGAATLTDEVGIDVAQHVAKFLGEALGLRVGGGSIAVLDEMVASGFKGRKSGKG 594
Query: 578 LYTYEKG-----SKPKP-DPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNE 631
+ Y+ SK KP + + L I+ + + P SV ++++ IL +NE
Sbjct: 595 YFIYDDSRRLNTSKKKPVNEAALRILHK----HQLTPVSTVSSVADRQL--RILCRYINE 648
Query: 632 SCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYG-NF 690
+ LEEG++ SD D ASV G+ FP ++GG + D GA+ + + + ++++ Y
Sbjct: 649 AAICLEEGVISSPSDGDTASVFGIGFPPFKGGPFRFIDMYGADKLISDMLRYAEAYSPEQ 708
Query: 691 FKPSRFLEERATK 703
FKP++ +++ A +
Sbjct: 709 FKPAQIIQDHAKR 721
>gi|416566914|ref|ZP_11764041.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 4441 H]
gi|363579264|gb|EHL63055.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 4441 H]
Length = 715
Score = 331 bits (849), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 225/702 (32%), Positives = 357/702 (50%), Gaps = 37/702 (5%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 74 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 132
Query: 128 KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 184
KT LGLPE+ LG++PG TQRLPRLVG+S A++M+L K + + + + GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALRAGLVDDVVPQT 192
Query: 185 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 242
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 193 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 248
Query: 243 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 302
+DVIE G+ G SG EA+ F EL M S+ L +FFA K P +D P
Sbjct: 249 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAIFFASTEVKKDPG-SDAPPGP 307
Query: 303 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 362
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 308 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 366
Query: 363 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 422
+ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 367 ASERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCAAHTIFASNTSS 426
Query: 423 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 482
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 427 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 486
Query: 483 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAA 542
V + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 487 VSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVGIDTGTK 546
Query: 543 TSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DPSVLPII 597
+ A+ +R F +P +V +L R G+ NG+G Y Y EKG K K DP++ +I
Sbjct: 547 IIPVLEAAYGER-FSAPANVVASILNDDRKGRKNGRGFYLYGEKGRKSKKQVDPAIYKLI 605
Query: 598 --EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGM 655
+ RLS +++ E + ++NE+ R +E ++ A D D +V G+
Sbjct: 606 GVQGQSRLS------------AQQVAERCVMLMLNEAARCFDEKVIRSARDGDIGAVFGI 653
Query: 656 SFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 697
FP + GG + DA+G + +L++ + LYG + P L
Sbjct: 654 GFPPFLGGPFRYMDALGPGEMVATLQRLAALYGPRYAPCEQL 695
>gi|421886226|ref|ZP_16317403.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Senftenberg
str. SS209]
gi|379984243|emb|CCF89676.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Senftenberg
str. SS209]
Length = 708
Score = 331 bits (849), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 227/708 (32%), Positives = 359/708 (50%), Gaps = 37/708 (5%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+
Sbjct: 7 DNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINM 66
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 67 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 125
Query: 128 KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 184
KT LGLPE+ LG++PG TQRLPRLVG+S A++M+L K + + + K GL+D VV
Sbjct: 126 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDVVPQT 185
Query: 185 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 242
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 186 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 241
Query: 243 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 302
+DVIE G+ G SG EA+ F EL M S+ L +FFA K P +D P
Sbjct: 242 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAIFFASTEVKKDPG-SDAPPGP 300
Query: 303 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 362
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 301 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 359
Query: 363 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 422
+ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 360 ASERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCAAHTIFASNTSS 419
Query: 423 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 482
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 420 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 479
Query: 483 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAA 542
V + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 480 VSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVGIDTGTK 539
Query: 543 TSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DPSVLPII 597
+ A+ +R F +P +V +L R G+ NG+G Y Y EKG K K DP++ +I
Sbjct: 540 IIPVLEAAYGER-FSAPANVVASILNDDRKGRKNGRGFYLYGEKGRKSKKQVDPAIYKLI 598
Query: 598 --EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGM 655
+ RLS +++ E + ++NE+ R +E ++ A D D +V G+
Sbjct: 599 GVQGQSRLS------------AQQVAERCVMLMLNEAARCFDEKVIRSARDGDIGAVFGI 646
Query: 656 SFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATK 703
FP + GG + DA+G + +L++ + LYG + P L A +
Sbjct: 647 GFPPFLGGPFRYMDALGPGEMVATLQRLAALYGPRYAPCEQLVRMAER 694
>gi|117620841|ref|YP_856678.1| multifunctional fatty acid oxidation complex subunit alpha
[Aeromonas hydrophila subsp. hydrophila ATCC 7966]
gi|117562248|gb|ABK39196.1| fatty oxidation complex, alpha subunit FadJ [Aeromonas hydrophila
subsp. hydrophila ATCC 7966]
Length = 715
Score = 331 bits (848), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 242/729 (33%), Positives = 372/729 (51%), Gaps = 45/729 (6%)
Query: 1 MAAPRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDD-VKAIVLTGN 57
M+ ++ V DG+ I+T+ P +N L V ++ E + + + +V++G
Sbjct: 1 MSEKTFSLAVRQDGIGILTMDVPGESMNTLKAAFVEEIRAVLAEVKANKELIGLVVVSGK 60
Query: 58 GGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELA 117
F G DI++ A D + +++ IE P++AA+ G LGGGLELA
Sbjct: 61 KDSFIAGADISMLAACTSAKDAETLSREG-QVIFAEIESLPIPVIAAIHGPCLGGGLELA 119
Query: 118 MGCHARIAAP--KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGW 172
+ CH R+ KT LGLPE+ LG++PG TQRLPRL+G++KA+++ML K + +++
Sbjct: 120 LACHGRVVTDHGKTVLGLPEVQLGLLPGSGGTQRLPRLIGVAKALDLMLTGKQVRAKQAK 179
Query: 173 KLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSE----AREVL-KLA 227
KLGL+D VV LL A+ +A + KP R + D G L E R+VL A
Sbjct: 180 KLGLVDDVVPPSILLDA----AIKLAKKGKP--RHELKRDLQGKLLETNKLGRKVLFDQA 233
Query: 228 RLQAK-KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQ 286
R K KT N P L+V+ G+ G +G+ E++ F ELVM S L +FFA
Sbjct: 234 RKGVKAKTRGNYPAPDLILEVVRIGVEEGMQAGLAAESRHFGELVMTAESAALRSIFFAT 293
Query: 287 RATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIA-TAHILNNIYVVLKEVNSEYLLKGI 345
K VT G +PR V AV+GGGLMG GIA + V +K+V S + +
Sbjct: 294 TEMKK--EVTYQGAEPRKVGHAAVLGGGLMGGGIAFVTATKAGVPVRIKDVASSGIGNAM 351
Query: 346 KTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSE 405
+ + + R +L + + + +L G LDYS F VDMV+EAV E + LK ++ +
Sbjct: 352 RYSYDILAKKLKRRQLLRSELEKQMSLLTGTLDYSGFHRVDMVVEAVFEDLSLKHQMVKD 411
Query: 406 LEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQV 465
+E+ C H + A+NTS++ ++ + + +R++G H+FSP MPL EI+ TSA+
Sbjct: 412 VERECGEHTVFASNTSSLPIHQIASVAAHPERVVGLHYFSPVDKMPLAEIIPHAGTSAET 471
Query: 466 ILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLP 525
+ + + K P+VV + GF VNR PY A LV G V +D A+ FG P
Sbjct: 472 VATTLAFARAQGKTPIVVKDEAGFYVNRILAPYMNEAARLVLEGEPVEVLDGALLDFGFP 531
Query: 526 IGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLV-DLLLKSGRNGKANGKGLYTYEKG 584
+GP LLD G V A S +K FQ+P + LL++ R G+ NGKG Y Y K
Sbjct: 532 VGPITLLDEVGIDVGAKISPILEKELGGEQFQAPAAFNKLLQNDRKGRKNGKGFYLYGKA 591
Query: 585 S----------KPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCR 634
+ K D SV ++ I P K + + E+ E + ++NE+
Sbjct: 592 APRSKLTGKEGKKMVDESVYGVL-------GISPQAK---LAKTELAERCVLMMLNEAAM 641
Query: 635 VLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPS 694
L+ G+V A D D ++ G+ FP + GG + D++G ++ L+ + + YG+ F P
Sbjct: 642 ALDSGVVASARDGDIGAIFGIGFPPFLGGPFRYMDSLGIEHLVGRLEHYQKRYGDRFAPC 701
Query: 695 RFLEERATK 703
L+ A +
Sbjct: 702 DRLKAMAAE 710
>gi|168229765|ref|ZP_02654823.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
subsp. enterica serovar Kentucky str. CDC 191]
gi|194472438|ref|ZP_03078422.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
subsp. enterica serovar Kentucky str. CVM29188]
gi|194458802|gb|EDX47641.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
subsp. enterica serovar Kentucky str. CVM29188]
gi|205335960|gb|EDZ22724.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
subsp. enterica serovar Kentucky str. CDC 191]
Length = 715
Score = 331 bits (848), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 227/708 (32%), Positives = 358/708 (50%), Gaps = 37/708 (5%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 74 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 132
Query: 128 KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 184
KT LGLPE+ LG++PG TQRLPRLVG+S A++M+L K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDVVPQT 192
Query: 185 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 242
LL+ A+++A + + R+L +++ G L A + + +KT N P +
Sbjct: 193 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTTQKTQGNYPATE 248
Query: 243 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 302
+DVIE G+ G SG EA+ F EL M S+ L VFFA K P +D P
Sbjct: 249 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAVFFASTEVKKDPG-SDAPPGP 307
Query: 303 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 362
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 308 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 366
Query: 363 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 422
+ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 367 ASERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCAAHTIFASNTSS 426
Query: 423 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 482
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 427 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 486
Query: 483 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAA 542
V + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 487 VSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVGIDTGTK 546
Query: 543 TSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DPSVLPII 597
+ A+ +R F +P +V +L R G+ NG+G Y Y EKG K K DP++ +I
Sbjct: 547 IIPVLEAAYGER-FSAPANVVASILNDDRKGRKNGRGFYLYGEKGRKSKKQVDPAIYKLI 605
Query: 598 --EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGM 655
+ RLS +++ E + ++NE+ R +E ++ A D D +V G+
Sbjct: 606 GVQGQSRLS------------AQQVAERCVMLMLNEAARCFDEKVIRSARDGDIGAVFGI 653
Query: 656 SFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATK 703
FP + GG + DA+G + +L++ + LYG + P L A +
Sbjct: 654 GFPPFLGGPFRYMDALGPGEMVATLQRLAALYGPRYAPCEQLVRMAER 701
>gi|378954267|ref|YP_005211754.1| putative fatty acid oxidation complex alpha subunit [Salmonella
enterica subsp. enterica serovar Gallinarum/pullorum
str. RKS5078]
gi|438131333|ref|ZP_20873626.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Pullorum
str. ATCC 9120]
gi|357204878|gb|AET52924.1| putative fatty acid oxidation complex alpha subunit [Salmonella
enterica subsp. enterica serovar Gallinarum/pullorum
str. RKS5078]
gi|434941548|gb|ELL47977.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Pullorum
str. ATCC 9120]
Length = 715
Score = 331 bits (848), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 226/702 (32%), Positives = 357/702 (50%), Gaps = 37/702 (5%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 74 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 132
Query: 128 KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 184
KT LGLPE+ LG++PG TQRLPRLVG+S A++M+L K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDVVPQT 192
Query: 185 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 242
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 193 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 248
Query: 243 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 302
+DVIE G+ G SG EA+ F EL M S+ L VFFA K P +D P
Sbjct: 249 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAVFFASTEVKKDPG-SDAPPGP 307
Query: 303 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 362
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 308 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 366
Query: 363 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 422
++ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 367 ANERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCAAHTIFASNTSS 426
Query: 423 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 482
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 427 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 486
Query: 483 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAA 542
V + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 487 VSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVGIDTGTK 546
Query: 543 TSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DPSVLPII 597
+ + +R F +P +V +L R G+ NG+G Y Y EKG K K DP++ +I
Sbjct: 547 IIPVLEAEYGER-FSAPANVVASILNDDRKGRKNGRGFYLYGEKGRKSKKQVDPAIYKLI 605
Query: 598 --EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGM 655
+ RLS +++ E + ++NE+ R +E ++ A D D +V G+
Sbjct: 606 GVQGQSRLS------------AQQVAERCVMLMLNEAARCFDEKVIRSARDGDIGAVFGI 653
Query: 656 SFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 697
FP + GG + DA+G + +L++ + LYG + P L
Sbjct: 654 GFPPFLGGPFRYMDALGPGEMVATLQRLAALYGPRYAPCEQL 695
>gi|254447502|ref|ZP_05060968.1| fatty acid oxidation complex alpha subunit [gamma proteobacterium
HTCC5015]
gi|198262845|gb|EDY87124.1| fatty acid oxidation complex alpha subunit [gamma proteobacterium
HTCC5015]
Length = 714
Score = 331 bits (848), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 242/717 (33%), Positives = 378/717 (52%), Gaps = 41/717 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKA-IVLTGNGGRFSG 63
++EV NDGVAI+TL P +N L ++ + VKA + ++G F
Sbjct: 8 SVEVRNDGVAIVTLDVPGESMNVLNASFADEAYAVLDQVENDPKVKASVFISGKDSGFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G D+ + Q AG + + V +L + D KKPI+AA+ G ALGGG ELA+ CH R
Sbjct: 68 GADVKMLQATTSAGGAAHIARVG-QLTFQKMADSKKPIIAAIHGPALGGGYELALACHGR 126
Query: 124 IAAP--KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+A+ KT +GLPE+ LGV+PG TQRLPRL+GL +A+ ++L K + + +G K G++D
Sbjct: 127 VASDSRKTVVGLPEVMLGVLPGSGGTQRLPRLIGLQQALPLILQGKQVKAFKGVKKGMVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREV-LKLARLQAKK---- 233
VV E+LL + AL + + P RS + D L E + K+ QA+K
Sbjct: 187 KVVPKEQLLDTAIEMALGMVGKVDPN-RSAAKKDIKDRLLEDNPIGRKVVFDQARKMVKA 245
Query: 234 -TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 292
T N P A +D IE G+ +G G++ E+K F EL M +R L+ VFF + ++
Sbjct: 246 QTKGNYPAPLAIIDCIEYGLNNGLEKGLVYESKRFGELAMTKVARNLMRVFFTDQELAR- 304
Query: 293 PNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANV 352
+ T G K +++V V+GGGLMG+GI T + N V+ + E KGI ++
Sbjct: 305 HDFT--GSKGADIQQVGVLGGGLMGAGIGTVSLFNAKKSVIIKDRDE---KGIGNANQHI 359
Query: 353 RGLVTR----GKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEK 408
+ + +T+ + L +GV++Y KD D+++EAV E++ LK ++ ++E
Sbjct: 360 KDAADKKLKFQGITEQEHRELLSKYQGVIEYEPLKDCDIIVEAVFENLELKHQMIQDVEA 419
Query: 409 ACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILD 468
C + ATNTS++ L + ++++ H+FSP MPLLEIV+ ++T+ V+
Sbjct: 420 NCKDDVVFATNTSSLPLKDIAAAAKRPEQVVAMHYFSPVEKMPLLEIVKHDKTADWVVST 479
Query: 469 LMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGP 528
+ +G+ K +VV + GF VNR FPY+ + GV + ++D A+ G P+GP
Sbjct: 480 AVDLGRAQGKKVIVVKDGAGFYVNRMLFPYANEIAWMAMEGVPLDQLDKAMVKAGFPVGP 539
Query: 529 FQLLDLAGYGVAAATSKEFDKAFPDRSFQSP-LVDLLLKSGRNGKANGKGLYTY--EKGS 585
LLD G VA F +R F++P + LL + R G+ KG+Y Y E G
Sbjct: 540 ISLLDEVGVDVAGKVQPNLLAQFGER-FEAPDMSQKLLDANRLGRKTKKGMYLYDQETGK 598
Query: 586 KPKP-DPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRA 644
K K DP+V ++ + P K +++ EI L P++NE+ R LE+G +
Sbjct: 599 KLKEIDPAVYTLL-------GVEPNKK---ISDAEIRRRSLLPLLNEAVRCLEDGTITSP 648
Query: 645 SDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERA 701
D D ++ G+ F + GG DA+GA V SL+++ +LYG F P L + A
Sbjct: 649 RDGDLGAIFGIGFIPFSGGPFRMIDAMGAGAVVNSLQRYEELYGMRFTPCDMLLDYA 705
>gi|238912333|ref|ZP_04656170.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Tennessee
str. CDC07-0191]
Length = 715
Score = 331 bits (848), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 228/708 (32%), Positives = 358/708 (50%), Gaps = 37/708 (5%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 74 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 132
Query: 128 KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 184
KT LGLPE+ LG++PG TQRLPRLVG+S A++M+L K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDVVPQT 192
Query: 185 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 242
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 193 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 248
Query: 243 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 302
+DVIE G+ G SG EA+ F EL M S+ L VFFA K P +D P
Sbjct: 249 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAVFFASTEVKKDPG-SDAPPGP 307
Query: 303 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 362
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 308 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 366
Query: 363 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 422
+ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 367 ASERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCAAHTIFASNTSS 426
Query: 423 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 482
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 427 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 486
Query: 483 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAA 542
V + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 487 VSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVGIDTGTK 546
Query: 543 TSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DPSVLPII 597
+ A+ +R F +P +V +L R G+ NG+G Y Y EKG K K DP++ +I
Sbjct: 547 IIPVLEAAYGER-FSAPANVVASILNDDRKGRKNGRGFYLYGEKGRKSKKQVDPAIYKLI 605
Query: 598 --EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGM 655
+ RLS +++ E + ++NE+ R +E ++ A D D +V G+
Sbjct: 606 GVQGQSRLS------------AQQVAERCVMLMLNEAARCFDEKVIRSARDGDIGAVFGI 653
Query: 656 SFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATK 703
FP + GG DA+G + +L++ + LYG + P L A +
Sbjct: 654 GFPPFLGGPFRHMDALGPGEMVATLQRLAALYGPRYAPCEQLVRMAER 701
>gi|168465897|ref|ZP_02699767.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
subsp. enterica serovar Newport str. SL317]
gi|418763834|ref|ZP_13319940.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 35185]
gi|418765604|ref|ZP_13321687.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 35199]
gi|418770007|ref|ZP_13326032.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 21539]
gi|418776484|ref|ZP_13332430.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 33953]
gi|418781692|ref|ZP_13337568.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 35188]
gi|418785699|ref|ZP_13341526.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 21559]
gi|418803107|ref|ZP_13358731.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 35202]
gi|419789214|ref|ZP_14314896.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. Levine 1]
gi|419791304|ref|ZP_14316957.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. Levine 15]
gi|195631449|gb|EDX50009.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
subsp. enterica serovar Newport str. SL317]
gi|392615718|gb|EIW98154.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. Levine 1]
gi|392620524|gb|EIX02891.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. Levine 15]
gi|392731527|gb|EIZ88754.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 35185]
gi|392738210|gb|EIZ95356.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 21539]
gi|392740117|gb|EIZ97243.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 35199]
gi|392745929|gb|EJA02948.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 35188]
gi|392746195|gb|EJA03213.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 33953]
gi|392750940|gb|EJA07897.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 21559]
gi|392775717|gb|EJA32408.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 35202]
Length = 715
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 226/708 (31%), Positives = 359/708 (50%), Gaps = 37/708 (5%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 74 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 132
Query: 128 KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 184
KT LGLPE+ LG++PG TQRLPRLVG+S A++M+L K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDVVPQT 192
Query: 185 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 242
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 193 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 248
Query: 243 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 302
+DVIE G+ G SG EA+ F EL M S+ L +FFA K P +D P
Sbjct: 249 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAIFFASTEVKKDPG-SDAPPGP 307
Query: 303 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 362
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 308 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 366
Query: 363 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 422
+ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 367 ASERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCATHTIFASNTSS 426
Query: 423 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 482
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 427 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 486
Query: 483 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAA 542
V + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 487 VSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVGIDTGTK 546
Query: 543 TSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DPSVLPII 597
+ A+ +R F +P +V +L R G+ NG+G Y Y EKG K K DP++ +I
Sbjct: 547 IIPVLEAAYGER-FSAPANVVASILNDDRKGRKNGRGFYLYGEKGRKSKKQVDPAIYKLI 605
Query: 598 --EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGM 655
+ RLS +++ + + ++NE+ R +E ++ A D D +V G+
Sbjct: 606 GVQGQSRLS------------AQQVADRCVMLMLNEAARCFDEKVIRSARDGDIGAVFGI 653
Query: 656 SFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATK 703
FP + GG + DA+G + +L++ + LYG + P L A +
Sbjct: 654 GFPPFLGGPFRYMDALGPGEMVATLQRLAALYGPRYAPCEQLVRMAER 701
>gi|354724370|ref|ZP_09038585.1| multifunctional fatty acid oxidation complex subunit alpha
[Enterobacter mori LMG 25706]
Length = 715
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 239/711 (33%), Positives = 365/711 (51%), Gaps = 41/711 (5%)
Query: 13 DGVAIITLINP--PVNAL----AIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFD 66
D VA+IT+ P +N L + + A LK E T R + ++ F G D
Sbjct: 14 DNVAVITIDVPDEKMNTLKAEFGVQVRAMLKQLRENKTIRG---LVFISAKPDNFIAGAD 70
Query: 67 INVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA 126
IN+ + A + + +++ I P++AA+ G LGGGLELA+ CH+RI
Sbjct: 71 INMIARAQSAQEAEELARQGQQVMAE-IHALSFPVIAAIHGACLGGGLELALACHSRICT 129
Query: 127 --PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVV 181
KT LGLPE+ LG++PG TQRLPRLVG+S A+EM+L K + + + K+GL+D VV
Sbjct: 130 DDAKTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALEMILTGKQLRARQALKVGLVDEVV 189
Query: 182 TSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMP 239
LL+ A+++A + + R L +++ G L A +++ +KT N P
Sbjct: 190 PHSILLEA----AVELALKGRQAKRPLPVRERVLAGPLGRALLFNMVSKKTEQKTKGNYP 245
Query: 240 QHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIG 299
+ L+VIE G+ G SG EAK F EL M S+ L +FFA K P
Sbjct: 246 AAKRILEVIETGLSQGSSSGYAAEAKAFGELAMTPQSQALRSIFFASIDVKKDPGSE--- 302
Query: 300 LKPRGVRKVAVIGGGLMGSGIA-TAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTR 358
+P +R V V+GGGLMG GIA + V +K++N + + ++ N+ V R
Sbjct: 303 AEPAPLRAVGVLGGGLMGGGIAFVTASKGKLPVRIKDINPKGINHALQYSWQNLDQKVKR 362
Query: 359 GKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 418
+ + + L M+ G DY F D+VIEAV E + LKQ++ +++E+ C PH I A+
Sbjct: 363 RHIKASERDKTLSMITGTTDYRGFAHRDLVIEAVFEDLALKQQMVADVEQHCAPHTIFAS 422
Query: 419 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKK 478
NTS++ + + K + +++IG HFFSP MPL+E++ TS Q + ++ + K K
Sbjct: 423 NTSSLPIGDIAAKAARPEQVIGLHFFSPVEKMPLVEVIPHATTSPQTVATVVKLAKKQGK 482
Query: 479 VPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYG 538
P+VV + GF VNR PY A L++ G + +D A+ FG P+GP QLLD G
Sbjct: 483 TPIVVADKAGFYVNRILAPYINEAMRLLTEGEKIEHVDEALVKFGFPVGPIQLLDEVGID 542
Query: 539 VAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DPSV 593
+ A+ DR F P +V +LK R G+ N +G Y Y KG K K DP+V
Sbjct: 543 TGTKIIPVLEAAYGDR-FSPPANIVSAILKDDRKGRKNERGFYLYGAKGRKSKKQVDPAV 601
Query: 594 LPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVL 653
+I ++ GK ++ + E + ++NE+ R E ++ A D D +V
Sbjct: 602 YGLI-------SVTGQGK---LSSAQCAERCVMMMLNEAARCFGEQVIRSARDGDIGAVF 651
Query: 654 GMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
G+ FP + GG + D +GA V L++ + YG F P L + +G
Sbjct: 652 GIGFPPFLGGPFRYMDTLGAGEVVAILQRLASQYGPRFTPCDELLQMVERG 702
>gi|16765715|ref|NP_461330.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhimurium
str. LT2]
gi|378445815|ref|YP_005233447.1| putative fatty acid oxidation complex alpha subunit [Salmonella
enterica subsp. enterica serovar Typhimurium str.
D23580]
gi|378451113|ref|YP_005238472.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhimurium
str. 14028S]
gi|378700298|ref|YP_005182255.1| putative fatty acid oxidation complex alpha subunit [Salmonella
enterica subsp. enterica serovar Typhimurium str.
SL1344]
gi|378984951|ref|YP_005248106.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhimurium
str. T000240]
gi|379701622|ref|YP_005243350.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhimurium
str. ST4/74]
gi|383497088|ref|YP_005397777.1| fatty acid oxidation complex subunit alpha [Salmonella enterica
subsp. enterica serovar Typhimurium str. 798]
gi|422026679|ref|ZP_16373060.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhimurium
str. STm1]
gi|422031703|ref|ZP_16377859.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhimurium
str. STm2]
gi|427551965|ref|ZP_18928352.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhimurium
str. STm8]
gi|427568296|ref|ZP_18933071.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhimurium
str. STm9]
gi|427588696|ref|ZP_18937867.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhimurium
str. STm3]
gi|427612160|ref|ZP_18942728.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhimurium
str. STm4]
gi|427635977|ref|ZP_18947625.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhimurium
str. STm6]
gi|427656704|ref|ZP_18952390.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhimurium
str. STm10]
gi|427661947|ref|ZP_18957297.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhimurium
str. STm11]
gi|427671909|ref|ZP_18962115.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhimurium
str. STm12]
gi|427799422|ref|ZP_18967382.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhimurium
str. STm5]
gi|81522343|sp|Q8ZNA7.1|FADJ_SALTY RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|16420932|gb|AAL21289.1| putative dehydrogenase [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|261247594|emb|CBG25421.1| putative fatty acid oxidation complex alpha subunit [Salmonella
enterica subsp. enterica serovar Typhimurium str.
D23580]
gi|267994491|gb|ACY89376.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhimurium
str. 14028S]
gi|301158946|emb|CBW18459.1| hypothetical fatty acid oxidation complex alpha subunit [Salmonella
enterica subsp. enterica serovar Typhimurium str.
SL1344]
gi|312913379|dbj|BAJ37353.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhimurium
str. T000240]
gi|323130721|gb|ADX18151.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhimurium
str. ST4/74]
gi|380463909|gb|AFD59312.1| putative fatty acid oxidation complex alpha subunit [Salmonella
enterica subsp. enterica serovar Typhimurium str. 798]
gi|414017246|gb|EKT00985.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhimurium
str. STm1]
gi|414018055|gb|EKT01730.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhimurium
str. STm8]
gi|414019205|gb|EKT02825.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhimurium
str. STm2]
gi|414031709|gb|EKT14753.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhimurium
str. STm9]
gi|414032901|gb|EKT15885.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhimurium
str. STm3]
gi|414036147|gb|EKT18989.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhimurium
str. STm4]
gi|414046228|gb|EKT28574.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhimurium
str. STm10]
gi|414047105|gb|EKT29402.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhimurium
str. STm6]
gi|414052063|gb|EKT34137.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhimurium
str. STm11]
gi|414058930|gb|EKT40561.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhimurium
str. STm12]
gi|414064415|gb|EKT45356.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhimurium
str. STm5]
Length = 715
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 225/702 (32%), Positives = 356/702 (50%), Gaps = 37/702 (5%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVVAIDVPGEKVNTLKAEFATQVRAILKQIRENKALQGVVFISAKADNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 74 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 132
Query: 128 KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 184
KT LGLPE+ LG++PG TQRLPRLVG+S A++M+L K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDVVPQT 192
Query: 185 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 242
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 193 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 248
Query: 243 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 302
+DVIE G+ G SG EA+ F EL M S+ L +FFA K P +D P
Sbjct: 249 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAIFFASTEVKKDPG-SDAPPGP 307
Query: 303 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 362
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 308 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 366
Query: 363 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 422
+ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 367 ASERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCAAHTIFASNTSS 426
Query: 423 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 482
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 427 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 486
Query: 483 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAA 542
V + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 487 VSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVGIDTGTK 546
Query: 543 TSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DPSVLPII 597
+ A+ +R F +P +V +L R G+ NG+G Y Y EKG K K DP++ +I
Sbjct: 547 IIPVLEAAYGER-FSAPANVVASILNDDRKGRKNGRGFYLYGEKGRKSKKQVDPAIYKLI 605
Query: 598 --EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGM 655
+ RLS +++ E + ++NE+ R +E ++ A D D +V G+
Sbjct: 606 GVQGQSRLS------------AQQVAERCVMLMLNEAARCFDEKVIRSARDGDIGAVFGI 653
Query: 656 SFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 697
FP + GG + DA+G + +L++ + LYG + P L
Sbjct: 654 GFPPFLGGPFRYMDALGPGEMVATLQRLAALYGPRYAPCEQL 695
>gi|429101200|ref|ZP_19163174.1| Enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase /
3-hydroxybutyryl-CoA epimerase [Cronobacter turicensis
564]
gi|426287849|emb|CCJ89287.1| Enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase /
3-hydroxybutyryl-CoA epimerase [Cronobacter turicensis
564]
Length = 717
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 239/719 (33%), Positives = 363/719 (50%), Gaps = 47/719 (6%)
Query: 8 MEVGNDGVAIITLINP--PVNALAI-------PIVAGLKDKFEEATSRDDVKAIVLTGNG 58
+++ D VA++T+ P +N L IV L+D +RD + ++
Sbjct: 9 LQMRPDNVAVVTIDVPGEKMNTLKAEFARDVRAIVKTLRD------NRDLAGVVFISAKP 62
Query: 59 GRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAM 118
F G DIN+ A + + +++ I +VAA+ G LGGGLELA+
Sbjct: 63 DNFIAGADINMIAHCQSAQEAEALASQGQQIMAE-IRALPVHVVAAIHGACLGGGLELAL 121
Query: 119 GCHARIAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWK 173
CH+RI KTQLGLPE+ LG++PG TQRLPRLVG+S A+EM+L K + + K
Sbjct: 122 ACHSRICTDDAKTQLGLPEVQLGLLPGSGGTQRLPRLVGVSTALEMILAGKQLRPRQALK 181
Query: 174 LGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQA 231
GL+D VV LL+ A ++A +R+P R L +++ G L A + +
Sbjct: 182 AGLVDDVVPQSILLEA----AAELAKKRRPSPRRLPVRERVLAGPLGRALLFRMVTQKTH 237
Query: 232 KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 291
+KT N P Q +DV+ G+ G SG EA+ F EL M S L +FFA T++
Sbjct: 238 QKTHGNYPAAQRIIDVVRTGLEQGSASGYQAEARAFGELAMTPESAALRGLFFA---TTE 294
Query: 292 VPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEA 350
+ T PR + V V+GGGLMG GIA + V +K+++ + + +K
Sbjct: 295 LKKETGSEAAPRALHSVGVLGGGLMGGGIAYVTATKARLPVRIKDISEKGINHALKYSWD 354
Query: 351 NVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKAC 410
+ V R L + + + ++ DY F D+V+EAV E + LKQ + +E+E
Sbjct: 355 LLEKKVRRRHLRASERDAQMALISASTDYRGFHQRDIVVEAVFEDLTLKQNMVAEIEAHT 414
Query: 411 PPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLM 470
PH I A+NTS++ + + + +++IG H+FSP MPL+E++ TSA+ I +
Sbjct: 415 APHTIFASNTSSLPIGDIAAGAARPEQVIGLHYFSPVDKMPLVEVIPHAGTSAETIATTV 474
Query: 471 TVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 530
+ K K P+VV +C GF VN PY A + G + +ID A+ G P+GP Q
Sbjct: 475 QLAKKQGKTPIVVADCAGFYVNHILAPYINEAMRCLMEGESIEKIDQALVKRGFPVGPIQ 534
Query: 531 LLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTYE---KGS 585
LLD G V ++A+ R F +P V +L R G+ NG+G Y Y + S
Sbjct: 535 LLDEVGIDVGTKIMPVLERAYGPR-FSAPGDAVAAILNDDRKGRKNGRGFYLYPAKGRKS 593
Query: 586 KPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRAS 645
+ DP+V +I + PGGK ++ +EI E + ++NE+ R L+EG+V A
Sbjct: 594 NKQVDPAVYGLI-------GVKPGGK---LSGEEIAERCVMMMLNEAARCLDEGVVRSAR 643
Query: 646 DLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
D D +V G+ FP + GG + D +GA V +L + S YG+ F P L A G
Sbjct: 644 DGDIGAVFGIGFPPFLGGPFRYMDTLGAAAVVATLTRLSTRYGDRFTPCDRLLRMAQTG 702
>gi|423196749|ref|ZP_17183332.1| fatty oxidation complex, alpha subunit FadJ [Aeromonas hydrophila
SSU]
gi|404632203|gb|EKB28832.1| fatty oxidation complex, alpha subunit FadJ [Aeromonas hydrophila
SSU]
Length = 707
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 241/721 (33%), Positives = 373/721 (51%), Gaps = 37/721 (5%)
Query: 1 MAAPRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDD-VKAIVLTGN 57
M+ ++ V DG+ I+T+ P +N L V ++ E + + + +V++G
Sbjct: 1 MSEKTFSLAVRQDGIGILTMDVPGESMNTLKAAFVDEIRAVLAEVKANKELIGLVVVSGK 60
Query: 58 GGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELA 117
F G DI++ A D + +++ IE P++AA+ G LGGGLELA
Sbjct: 61 KDSFIAGADISMLAACTSAKDAETLSREG-QVIFAEIESLPIPVIAAIHGPCLGGGLELA 119
Query: 118 MGCHARIAAP--KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGW 172
+ CH R+ KT LGLPE+ LG++PG TQRLPRL+G++KA+++ML K + +++
Sbjct: 120 LACHGRVVTDHGKTVLGLPEVQLGLLPGSGGTQRLPRLIGVAKALDLMLTGKQVRAKQAK 179
Query: 173 KLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSE----AREVL-KLA 227
KLGL+D VV +L+ A+ +A + KP R + D G L E R+VL A
Sbjct: 180 KLGLVDDVVPPSIMLEA----AIKLAKKGKP--RHELKRDLQGKLLETNKLGRKVLFDQA 233
Query: 228 RLQAK-KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQ 286
R K KT N P + L+V+ G+ G +G+ E++ F ELVM S L +FFA
Sbjct: 234 RKGVKAKTRGNYPAPELILEVVRIGVEEGMQAGLAAESRHFGELVMTSESAALRSIFFAT 293
Query: 287 RATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGI 345
K VT G +PR V AV+GGGLMG GIA + V +K+V S + +
Sbjct: 294 TEMKK--EVTYQGAEPRKVGHAAVLGGGLMGGGIAFVTATKAGVPVRIKDVASAGIGNAM 351
Query: 346 KTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSE 405
+ + + R + + + + +L G LDYS F VDMV+EAV E + LK ++ +
Sbjct: 352 RYSYDILAKKLKRRHILRSELEKQMSLLTGTLDYSGFHRVDMVVEAVFEDLALKHQMVQD 411
Query: 406 LEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQV 465
+E+ C H + A+NTS++ ++ + + +R++G H+FSP MPL EI+ TSA+
Sbjct: 412 VERECGEHTVFASNTSSLPIHQIASAAAHPERVVGLHYFSPVDKMPLAEIIPHAGTSAET 471
Query: 466 ILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLP 525
+ + + K P+VV + GF VNR PY A LV G V +D A+ FG P
Sbjct: 472 VATTLAFARAQGKTPIVVKDEAGFYVNRILAPYMNEAARLVLEGEPVEVLDGALLDFGFP 531
Query: 526 IGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLV-DLLLKSGRNGKANGKGLYTYEKG 584
+GP LLD G V A S +K FQ+P D LL++ R G+ NGKG Y Y K
Sbjct: 532 VGPITLLDEVGIDVGAKISPILEKELGGEQFQAPAAFDKLLQNDRKGRKNGKGFYLYGKA 591
Query: 585 SKPKP--DPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVV 642
+K K D SV ++ + P K + EI E + ++NE+ L+ G+V
Sbjct: 592 AKGKKKVDDSVYGVL-------GVSPQAKQ---AKAEIAERCVLMMLNEAAMALDSGVVA 641
Query: 643 RASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERAT 702
A D D ++ G+ FP + GG + D++G ++ L+ + + +G+ F P L+ A
Sbjct: 642 SARDGDIGAIFGIGFPPFLGGPFRYMDSLGIEHLVARLEHYQKRHGDRFAPCDRLKAMAA 701
Query: 703 K 703
+
Sbjct: 702 E 702
>gi|108760112|ref|YP_633521.1| multifunctional fatty acid oxidation complex subunit alpha
[Myxococcus xanthus DK 1622]
gi|108463992|gb|ABF89177.1| fatty oxidation complex, alpha subunit FadJ [Myxococcus xanthus DK
1622]
Length = 746
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 246/735 (33%), Positives = 362/735 (49%), Gaps = 59/735 (8%)
Query: 14 GVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVLT-GNGGRFSGGFDINVF 70
GVA+IT P PVN L+ A +VKA+V T G F G I+
Sbjct: 21 GVAVITFDLPDSPVNTLSPETGEAFLRVMMRAEREPEVKAVVFTSGKKDSFVAGAKIDFL 80
Query: 71 QKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA--APK 128
Q + A + + + E + + D KP+VAA+ G LGGGLE A+ C RIA +PK
Sbjct: 81 QTIKTAEEATAISRNGQE-GFDKLADFPKPVVAAIHGACLGGGLEWALACDYRIATDSPK 139
Query: 129 TQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEE 185
T LGLPE+ LG+IPG TQRLP L+G+ A++++L KS+ + KLG++D VV +
Sbjct: 140 TSLGLPEVQLGLIPGAGGTQRLPALIGVQAALDLILTGKSLKPAKAKKLGVVDEVVPTPI 199
Query: 186 LLKVSRLWALDIA---------------------------------ARRKPWIRSLHRTD 212
L ++ L A ++A A ++ W +
Sbjct: 200 LRAIAVLRAKELADGKLKVDRRHGQGFKGVAANGKAKGLAGFIQGLANKELWAEVALEDN 259
Query: 213 KLGSLSEAREVL-KLARLQA-KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKEL 270
LG R+VL AR Q KKT P + L V+ G+ G +G EAK F EL
Sbjct: 260 PLG-----RKVLFDQARKQLLKKTRGKFPAPEKALQVVRVGLESGHKAGQEAEAKAFGEL 314
Query: 271 VMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIA-TAHILNNI 329
V+ D S+ LV +FFA A K ++ KPR V+KVAV+GGGLMG GIA +L +
Sbjct: 315 VVSDVSKRLVEIFFATTALKKENGTSNPDAKPREVKKVAVLGGGLMGGGIAYVTSVLQGV 374
Query: 330 YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVI 389
V +K+ + + + +K +++ + V R LT+ +A ++ DYS FK D+VI
Sbjct: 375 PVRVKDKDDAGVGRAMKQVQSILDERVKRRSLTRREATAKSALVTAGTDYSGFKSADLVI 434
Query: 390 EAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHV 449
EAV E + LK +I +E+E I A+NTS+I + + + + ++IG H+FSP H
Sbjct: 435 EAVFEDLKLKHRIIAEVEAVTGDQTIFASNTSSIPITELAKGSRRPAQVIGMHYFSPVHK 494
Query: 450 MPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLG 509
MPLLEI+ T+ V + VG+ K +VV + GF +R PY A L++ G
Sbjct: 495 MPLLEIITHAGTADWVTATCVEVGRKQGKTVIVVNDGPGFYTSRILAPYMNEAAYLLAEG 554
Query: 510 VDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGR 569
D+ +D A+ FG P+GP LLD G VA + AF R ++ ++ GR
Sbjct: 555 ADIAELDRALVEFGFPVGPITLLDEVGIDVAQKVGPIMEAAFGKRMAAPKALEKVVADGR 614
Query: 570 NGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVV 629
G+ KG Y YE G K + D S+ ++ G + S E+ E ++ +V
Sbjct: 615 LGRKTQKGFYLYEDGKKQEVDSSIYALLPH---------GTERRSFDRAEMAERVVLQMV 665
Query: 630 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 689
NE+ R L EGI+ A D D ++ G+ FP + GG + D+ G V L+ + G
Sbjct: 666 NEAIRCLGEGILRSARDGDVGAIFGLGFPPFLGGPFHYVDSRGPAEVLRKLEHYHDKLGE 725
Query: 690 FFKPSRFLEERATKG 704
F P+ L E G
Sbjct: 726 RFAPAPHLVEMVKAG 740
>gi|324501522|gb|ADY40676.1| Trifunctional enzyme subunit alpha [Ascaris suum]
Length = 765
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 241/739 (32%), Positives = 371/739 (50%), Gaps = 63/739 (8%)
Query: 6 VTMEVGNDGVAIITLINPPV--NALAIPIVAGLKDKFEEATSRDDVK-AIVLTGNGGRFS 62
V++ V D VA++ + NP N L + L E + + ++ A++++G F
Sbjct: 38 VSLRVDGD-VAVVKIDNPGAKENTLNATVSRQLMQAMERIENDEGIRSAVLISGKPNSFI 96
Query: 63 GGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHA 122
G DI + +V A + + + IE KKP+VAA+ G +GGGLELAM CH
Sbjct: 97 AGADIGMLVRVKNAAEAQQISS-EAQRGFARIERSKKPVVAAIMGTCMGGGLELAMACHY 155
Query: 123 RIA--APKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 177
RIA +PKT+L LPE+ LG++PG TQRLP+LV ++ A++MML K++ ++ +GL+
Sbjct: 156 RIAVNSPKTRLALPEVMLGLLPGAGGTQRLPKLVSITNALDMMLTGKTVRPQKAKAIGLV 215
Query: 178 DAVV---------TSEELLKVSRLWALDIA----------ARRKPWIRS-----LHRTDK 213
D VV E L + A+D+A R++P + L R
Sbjct: 216 DHVVQPIGMGLKPADENNLDYLQKIAVDVARGLSSGKLKFERKRPPLERVTNYFLTRRPL 275
Query: 214 LGSLSEAREVLKLARLQA-KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVM 272
L S+ VLK+AR + K+TA N P LDV++EG+ G G E+K F EL
Sbjct: 276 LDSV-----VLKMARNKVMKQTAGNYPAPLKILDVVKEGLSTSGTEGYDAESKAFGELSQ 330
Query: 273 LDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVV 332
L+ VF K D R K+AVIG GLMG+GIA I I V
Sbjct: 331 TTQCNALIGVFHGSSDCKK-----DKYGPARKTEKLAVIGAGLMGAGIANVSIDKGIRTV 385
Query: 333 LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAV 392
L +++ L +G+ I + + G V + K+T + +N + LK L Y +D D+ IEAV
Sbjct: 386 LVDMHDAGLSRGMNQIYSQLNGSVKKKKITPMQKDNYMANLKPSLSYDALRDCDVAIEAV 445
Query: 393 IESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPL 452
E + LK KI +LE+ P HC++A+NTS + ++ + + +++IG H+FSP M L
Sbjct: 446 FEEIALKHKIVKQLEEVVPSHCVIASNTSALPISEIASVSKRPEQVIGMHYFSPVEKMQL 505
Query: 453 LEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDV 512
LE++ T +TS + + +G KK+ VVV +C GF V R P L+ GV
Sbjct: 506 LEVITTNKTSKETLAVAAQLGLAQKKLVVVVKDCPGFFVVRCLCPMMSEVVRLLQEGVQP 565
Query: 513 FRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLL---LKSGR 569
+D +++G P+G L D G VA ++ KA R VDLL + SG
Sbjct: 566 QALDELTKAYGFPVGAATLADEVGLDVAEHVAQFLGKALGPR-VGGASVDLLSEMVSSGF 624
Query: 570 NGKANGKGLYTYEKG-----SKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEM- 623
G+ +GKG Y Y K S + + + + II + P +V+ E ++
Sbjct: 625 KGRKSGKGYYLYGKNKFTLKSGKRINEAAMKIIAKHHV-------NAPAAVSGTEDRQLR 677
Query: 624 ILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKW 683
+L VNE+ LEEG++ + D ASV G+ FP + GG + D GA + +S+ ++
Sbjct: 678 VLSRFVNEAAICLEEGVIQSPTAGDIASVFGIGFPPFWGGPFRFVDLFGAEKLVSSMSRY 737
Query: 684 SQLYG-NFFKPSRFLEERA 701
+ Y F+P++ L + A
Sbjct: 738 ADAYSEEQFQPAQILIDHA 756
>gi|332242961|ref|XP_003270650.1| PREDICTED: trifunctional enzyme subunit alpha, mitochondrial
isoform 1 [Nomascus leucogenys]
Length = 763
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 228/728 (31%), Positives = 364/728 (50%), Gaps = 40/728 (5%)
Query: 5 RVTMEVGNDGVAIITLINPP---VNALAIPIVAGLKDKFEEATSRDDVK-AIVLTGNGGR 60
R + G G + IN P VN L+ + + + E + D ++ A++++ G
Sbjct: 38 RTHINYGVKGDVAVIRINSPNSKVNTLSKELHSEFSEVMNEIWASDQIRSAVIISSKPGC 97
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
F G DIN+ +V+ + + +V +E KPIVAA+ G LGGGLELA+ C
Sbjct: 98 FIAGADINMLAACKTLQEVTQLSQ-EAQRIVEKLEKSTKPIVAAINGSCLGGGLELAISC 156
Query: 121 HARIAAP--KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLG 175
RIA KT LG PE+ LGV+PG TQRLP++VG+ A++MML +SI ++ K+G
Sbjct: 157 QYRIATKDRKTVLGTPEVLLGVLPGAGGTQRLPKMVGVPAALDMMLTGRSIRADRAKKMG 216
Query: 176 LIDAVV-------------TSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEA-- 220
L+D +V T E L +V+ +A +A ++ R +KL + +
Sbjct: 217 LVDQLVEPLGPGLKPPEERTMEYLEEVAITFAKGLADKKISPKRDKGLVEKLTAYAMTIP 276
Query: 221 ---REVLKLARLQAKKTAPNM-PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 276
++V K + +K + P +DV++ GI G +G L E++ F ELVM S
Sbjct: 277 FVRQQVYKKVEEKVRKQTKGLYPAPLKIIDVVKTGIEQGSDAGYLSESQKFGELVMTKES 336
Query: 277 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 336
+ L+ ++ Q K G + V+ +A++G GLMG+GIA + + +LK+
Sbjct: 337 KALMGLYHGQVLCKK----NKFGAPQKDVKHLAILGAGLMGAGIAQVSVDKGLKTILKDA 392
Query: 337 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 396
L +G + + + V + LT + ++ L G LDY F+ DMVIEAV E +
Sbjct: 393 TLTALDRGQQQVFRGLNDKVKKKALTSFERDSIFSNLTGQLDYQGFEKADMVIEAVFEDL 452
Query: 397 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 456
LK ++ E+E P HC+ A+NTS + ++ + + +++IG H+FSP M LLEI+
Sbjct: 453 SLKHRVLKEVEAVIPDHCVFASNTSALPISEIAAVSKRPEKVIGMHYFSPVDKMQLLEII 512
Query: 457 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 516
TE+TS + VG KV +VV + GF R P ++ GVD ++D
Sbjct: 513 TTEKTSKDTSASAVAVGLKQGKVIIVVKDGPGFYTTRCLAPMMSEVIRILQEGVDPKKLD 572
Query: 517 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKAN 574
S SFG P+G L+D G VA +++ K F +R L+ ++ G G+ +
Sbjct: 573 SLTTSFGFPVGAATLVDEVGVDVAKHVAEDLGKVFGERFGGGNPELLTQMVSKGFLGRKS 632
Query: 575 GKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCR 634
GKG Y Y++G K K S + I +L P +S ++++I ++ VNE+
Sbjct: 633 GKGFYIYQEGVKRKDLNSDMDSILASLKL----PPKSEVS-SDEDIQFRLVTRFVNEAVM 687
Query: 635 VLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPS 694
L+EGI+ ++ D +V G+ FP GG + D GA + LKK+ YG F P
Sbjct: 688 CLQEGILATPAEGDIGAVFGLGFPPCLGGPFRFVDLYGAQKIVDRLKKYEAAYGKQFTPC 747
Query: 695 RFLEERAT 702
+ L + A
Sbjct: 748 QLLADHAN 755
>gi|156933072|ref|YP_001436988.1| multifunctional fatty acid oxidation complex subunit alpha
[Cronobacter sakazakii ATCC BAA-894]
gi|166972672|sp|A7MH81.1|FADJ_ENTS8 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|156531326|gb|ABU76152.1| hypothetical protein ESA_00882 [Cronobacter sakazakii ATCC BAA-894]
Length = 717
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 235/714 (32%), Positives = 363/714 (50%), Gaps = 35/714 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
+++ D VA++T+ P +N L ++ + D+ +V ++ F
Sbjct: 8 NLQMRPDNVAVVTIDVPGEKMNTLKAEFARDVRAIVKTLRENRDLAGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +++ I +VAA+ G LGGGLELA+ CH+R
Sbjct: 68 GADINMIAHCQSAQEAEALASQGQQIMAE-IRALPVHVVAAIHGACLGGGLELALACHSR 126
Query: 124 IAAP--KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
I KT LGLPE+ LG++PG TQRLPRLVG+S A+EM+L K + + K GL+D
Sbjct: 127 ICTDDVKTLLGLPEVQLGLLPGSGGTQRLPRLVGVSTALEMILAGKQLRPRQALKAGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A ++A +R+P R L ++L G + A + + +KT
Sbjct: 187 DVVPQSILLEA----AAELAKKRRPAPRRLPVRERLLAGPIGRALLFRMVTQKTHQKTHG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P Q +DV+ G+ G SG EA+ F EL M S L +FFA T+++ T
Sbjct: 243 NYPAAQRIIDVVRTGLEQGSASGYQAEARAFGELAMTPESAALRGLFFA---TTELKKET 299
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEANVRGL 355
PR + V V+GGGLMG GIA + V +K+++ + + +K +
Sbjct: 300 GSEAAPRALHSVGVLGGGLMGGGIAYVTATKARLPVRIKDISEKGINHALKYSWDLLEKK 359
Query: 356 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCI 415
V R L + + + ++ DY F D+V+EAV E + LKQ + +E+E PH I
Sbjct: 360 VRRRHLRASERDAQMALISASTDYRGFHQRDIVVEAVFEDLTLKQNMVAEIEAHTAPHTI 419
Query: 416 LATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKI 475
A+NTS++ + + + +++IG H+FSP MPL+E++ TSA+ I + + K
Sbjct: 420 FASNTSSLPIGDIAAGATRPEQVIGLHYFSPVDKMPLVEVIPHAGTSAETIATTVQLAKK 479
Query: 476 IKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLA 535
K P+VV +C GF VNR PY A + G + +ID A+ G P+GP QLLD
Sbjct: 480 QGKTPIVVADCAGFYVNRILAPYINEAMRCLMEGESIEKIDEALVKRGFPVGPIQLLDEV 539
Query: 536 GYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTYE---KGSKPKPD 590
G V ++A+ R F +P V +L R G+ NG+G Y Y + SK + D
Sbjct: 540 GIDVGTKIMPVLERAYGPR-FSAPGDAVAAILNDDRKGRKNGRGFYLYPAKGRKSKKQVD 598
Query: 591 PSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDA 650
P+V +I + PGGK ++ +EI E + ++NE+ R L+EG+V A D D
Sbjct: 599 PAVYGLI-------GVKPGGK---LSGEEIAERCVMMMLNEAARCLDEGVVRSARDGDIG 648
Query: 651 SVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D +GA + T+L + + YG+ F P L A G
Sbjct: 649 AVFGIGFPPFLGGPFRYMDTLGAAAMATTLTRLATRYGDRFTPCDRLLRMAQTG 702
>gi|262276352|ref|ZP_06054161.1| fatty oxidation complex alpha subunit FadJ [Grimontia hollisae CIP
101886]
gi|262220160|gb|EEY71476.1| fatty oxidation complex alpha subunit FadJ [Grimontia hollisae CIP
101886]
Length = 706
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 237/716 (33%), Positives = 374/716 (52%), Gaps = 44/716 (6%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
++ GNDGVA +++ P +N L V + E ++ D+K +VL + F
Sbjct: 13 SLRYGNDGVAWLSIDVPGESMNTLQATFVDEVSAILSELENKGDIKGLVLYSAKPDNFVA 72
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G D+ + A D + + +L + IE +VAA+ G LGGGLELA+ CH+R
Sbjct: 73 GADVRMLDACKTAEDAQAIAEQGQQLF-SRIEKLPFHVVAAIHGPCLGGGLELALACHSR 131
Query: 124 IAAP--KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+A KT+LGLPE+ LG++PG TQRLPRL+G++ A++M+L K + +++ K+G++D
Sbjct: 132 VATDDDKTRLGLPEVQLGLLPGSGGTQRLPRLIGVAGALDMILTGKQLRAKKAKKMGVVD 191
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVL--KLARLQAKKTAP 236
VV LL+V A ++A + KP + + +G + R V+ + A+ +KT
Sbjct: 192 DVVPPSVLLRV----AEELALKGKPKRKGTWQDWAMGGNALGRSVVFEQAAKKTREKTRG 247
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P +A LDVI+ G+ G G+ EAK F ELVM S L +FFA A K T
Sbjct: 248 NYPATEAILDVIKYGLDKGIEKGLALEAKCFGELVMSPESAALRSIFFATTAMKKE---T 304
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEANVRGL 355
+PR V V V+GGGLMG+GIA NI V +K+V ++ GI +A L
Sbjct: 305 GADAEPRLVTGVTVLGGGLMGAGIANVTATKANIPVRIKDVGND----GILNAKAYSYNL 360
Query: 356 VTRGK----LTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACP 411
+ + + +++ + + + G DYS ++VIEAV E + LK ++ +E+E+
Sbjct: 361 LDKKRKRRIISKAEMQKMMDRISGTTDYSGMSRNNVVIEAVFEDLKLKHQMVAEVEENLS 420
Query: 412 PHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMT 471
+ ATNTS++ ++ + + + I+G H+FSP MPL+E++ TS + + ++
Sbjct: 421 EDTLFATNTSSLPIHQIAQGAKRPENIVGLHYFSPVDKMPLVEVIPHADTSEETVATVVK 480
Query: 472 VGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQL 531
+ K K P+VV + GF VNR PY A + + G V ID+A+ FG P+GP L
Sbjct: 481 LAKKQGKTPIVVADKAGFYVNRILAPYMNEAAMTLLSGESVEHIDNALLDFGFPVGPVTL 540
Query: 532 LDLAGYGVAAATSKEFDKAFPDRSFQSPLV-DLLLKSGRNGKANGKGLYTYEKGSKPKPD 590
LD G + A S +R F++P V D++L GR G+ +GKG + Y KG K + D
Sbjct: 541 LDEVGIDIGAKISPILLNELGER-FRAPDVFDVMLNDGRKGRKSGKGFFVY-KGKKKEVD 598
Query: 591 PSVLPI--IEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLD 648
V + +E +LS+ E+ + ++NE+ R L+EG+V A D D
Sbjct: 599 KRVYTLLGVELKSQLSS------------HELALRCVLMMLNEAARCLDEGVVKSARDGD 646
Query: 649 DASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D +G + L + YG F P L+ A +G
Sbjct: 647 IGAVFGIGFPPFLGGPFRYMDHIGIPRLVEMLAQHEAKYGERFAPCELLKVMAGEG 702
>gi|167993079|ref|ZP_02574174.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
gi|378989774|ref|YP_005252938.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhimurium
str. UK-1]
gi|205328843|gb|EDZ15607.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
gi|332989321|gb|AEF08304.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Typhimurium
str. UK-1]
Length = 715
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 225/702 (32%), Positives = 355/702 (50%), Gaps = 37/702 (5%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVVAIDVPGEKVNTLKAEFATQVRAILKQIRENKALQGVVFISAKADNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 74 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 132
Query: 128 KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 184
KT LGLPE+ LG++PG TQRLPRLVG+S A++M+L K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDVVPQT 192
Query: 185 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 242
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 193 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 248
Query: 243 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 302
+DVIE G+ G SG EA+ F EL M S+ L +FFA K P +D P
Sbjct: 249 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAIFFASTEVKKDPG-SDAPPGP 307
Query: 303 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 362
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 308 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 366
Query: 363 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 422
+ + L ++ G DY F D+VIEAV E +PLKQ++ E+E+ C H I A+NTS+
Sbjct: 367 ASERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVEEVEQNCAAHTIFASNTSS 426
Query: 423 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 482
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 427 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 486
Query: 483 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAA 542
V + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 487 VSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVGIDTGTK 546
Query: 543 TSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DPSVLPII 597
+ A+ +R F +P +V +L R G+ NG+G Y Y EKG K K DP++ +I
Sbjct: 547 IIPVLEAAYGER-FSAPANVVASILNDDRKGRKNGRGFYLYGEKGRKSKKQVDPAIYKLI 605
Query: 598 --EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGM 655
+ RLS +++ E + ++NE+ R +E ++ A D D +V G+
Sbjct: 606 GVQGQSRLS------------AQQVAERCVMLMLNEAARCFDEKVIRSARDGDIGAVFGI 653
Query: 656 SFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 697
FP + GG + DA+G + +L++ + LYG + P L
Sbjct: 654 GFPPFLGGPFRYMDALGPGEMVATLQRLAALYGPRYAPCEQL 695
>gi|168237415|ref|ZP_02662473.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. SL480]
gi|194735469|ref|YP_002115457.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|416421347|ref|ZP_11689460.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 315996572]
gi|416434613|ref|ZP_11697737.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 495297-1]
gi|416437936|ref|ZP_11699145.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 495297-3]
gi|416442834|ref|ZP_11702595.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 495297-4]
gi|416450050|ref|ZP_11707194.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 515920-1]
gi|416456203|ref|ZP_11711267.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 515920-2]
gi|416470503|ref|ZP_11718941.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 531954]
gi|416478657|ref|ZP_11721775.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. NC_MB110209-0054]
gi|416485012|ref|ZP_11724534.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. OH_2009072675]
gi|416496836|ref|ZP_11729339.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. CASC_09SCPH15965]
gi|416506846|ref|ZP_11734988.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. SARB31]
gi|416514141|ref|ZP_11738216.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. ATCC BAA710]
gi|416527479|ref|ZP_11743302.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. LQC 10]
gi|416533015|ref|ZP_11746024.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. SARB30]
gi|416543998|ref|ZP_11752567.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 19N]
gi|416554163|ref|ZP_11758114.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 29N]
gi|416557024|ref|ZP_11759206.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 42N]
gi|416575091|ref|ZP_11768183.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 81038-01]
gi|416582686|ref|ZP_11772885.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. MD_MDA09249507]
gi|416590330|ref|ZP_11777725.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 414877]
gi|416596931|ref|ZP_11781746.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 366867]
gi|416603959|ref|ZP_11785820.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 413180]
gi|416610902|ref|ZP_11790395.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 446600]
gi|416622187|ref|ZP_11796863.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 609458-1]
gi|416630661|ref|ZP_11800910.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 556150-1]
gi|416649232|ref|ZP_11809705.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 507440-20]
gi|416655307|ref|ZP_11812494.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 556152]
gi|416665304|ref|ZP_11816629.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. MB101509-0077]
gi|416683162|ref|ZP_11824190.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. MB102109-0047]
gi|416695039|ref|ZP_11827476.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. MB110209-0055]
gi|416703661|ref|ZP_11829757.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. MB111609-0052]
gi|416711639|ref|ZP_11835419.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 2009083312]
gi|416715790|ref|ZP_11838429.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 2009085258]
gi|416722541|ref|ZP_11843473.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 315731156]
gi|416736914|ref|ZP_11852297.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008282]
gi|416754378|ref|ZP_11861318.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008284]
gi|416765490|ref|ZP_11868845.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008285]
gi|416769398|ref|ZP_11871088.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008287]
gi|418483218|ref|ZP_13052228.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 80959-06]
gi|418486358|ref|ZP_13055326.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. CT_02035278]
gi|418497169|ref|ZP_13063590.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. CT_02035318]
gi|418501672|ref|ZP_13068051.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. CT_02035320]
gi|418505212|ref|ZP_13071560.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. CT_02035321]
gi|418507844|ref|ZP_13074153.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. CT_02035327]
gi|418526172|ref|ZP_13092151.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008286]
gi|254788615|sp|B4TQC2.1|FADJ_SALSV RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|194710971|gb|ACF90192.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. CVM19633]
gi|197289626|gb|EDY28989.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. SL480]
gi|322617132|gb|EFY14038.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 315996572]
gi|322617562|gb|EFY14461.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 495297-1]
gi|322624809|gb|EFY21638.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 495297-3]
gi|322630359|gb|EFY27129.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 495297-4]
gi|322634539|gb|EFY31272.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 515920-1]
gi|322639250|gb|EFY35942.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 515920-2]
gi|322640113|gb|EFY36780.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 531954]
gi|322645669|gb|EFY42193.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. NC_MB110209-0054]
gi|322652031|gb|EFY48394.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. OH_2009072675]
gi|322656204|gb|EFY52501.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. CASC_09SCPH15965]
gi|322659356|gb|EFY55603.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 19N]
gi|322665816|gb|EFY61999.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 81038-01]
gi|322669946|gb|EFY66087.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. MD_MDA09249507]
gi|322673931|gb|EFY70028.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 414877]
gi|322678690|gb|EFY74746.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 366867]
gi|322683516|gb|EFY79530.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 413180]
gi|322687591|gb|EFY83561.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 446600]
gi|323193575|gb|EFZ78780.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 609458-1]
gi|323198482|gb|EFZ83584.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 556150-1]
gi|323213604|gb|EFZ98394.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 556152]
gi|323218360|gb|EGA03070.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. MB101509-0077]
gi|323219687|gb|EGA04168.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. MB102109-0047]
gi|323225677|gb|EGA09903.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. MB110209-0055]
gi|323232354|gb|EGA16457.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. MB111609-0052]
gi|323235613|gb|EGA19697.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 2009083312]
gi|323241228|gb|EGA25264.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 2009085258]
gi|323244970|gb|EGA28972.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 315731156]
gi|323253873|gb|EGA37698.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008282]
gi|323262801|gb|EGA46352.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008284]
gi|323264176|gb|EGA47683.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008285]
gi|323270874|gb|EGA54312.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008287]
gi|363554389|gb|EHL38625.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. SARB31]
gi|363555798|gb|EHL40020.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. LQC 10]
gi|363561723|gb|EHL45837.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 29N]
gi|363566562|gb|EHL50577.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. ATCC BAA710]
gi|363568968|gb|EHL52934.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. SARB30]
gi|363578965|gb|EHL62763.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 42N]
gi|366054973|gb|EHN19316.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. CT_02035318]
gi|366061798|gb|EHN26042.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 80959-06]
gi|366065743|gb|EHN29929.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. CT_02035320]
gi|366068571|gb|EHN32710.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. CT_02035321]
gi|366076046|gb|EHN40088.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. CT_02035278]
gi|366080612|gb|EHN44581.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. CT_02035327]
gi|366828988|gb|EHN55867.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. 507440-20]
gi|372206159|gb|EHP19664.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008286]
Length = 715
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 225/708 (31%), Positives = 359/708 (50%), Gaps = 37/708 (5%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 74 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 132
Query: 128 KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 184
KT LGLPE+ LG++PG TQRLPRLVG+S A++M+L K + + + + GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALRAGLVDDVVPQT 192
Query: 185 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 242
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 193 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 248
Query: 243 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 302
+DVIE G+ G SG EA+ F EL M S+ L +FFA K P +D P
Sbjct: 249 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAIFFASTEVKKDPG-SDAPPGP 307
Query: 303 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 362
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 308 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 366
Query: 363 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 422
+ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 367 ASERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCAAHTIFASNTSS 426
Query: 423 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 482
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 427 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 486
Query: 483 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAA 542
V + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 487 VSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVGIDTGTK 546
Query: 543 TSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DPSVLPII 597
+ A+ +R F +P +V +L R G+ NG+G Y Y EKG K K DP++ +I
Sbjct: 547 IIPVLEAAYGER-FSAPANVVASILNDDRKGRKNGRGFYLYGEKGRKSKKQVDPAIYKLI 605
Query: 598 --EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGM 655
+ RLS +++ + + ++NE+ R +E ++ A D D +V G+
Sbjct: 606 GVQGQSRLS------------AQQVADRCVMLMLNEAARCFDEKVIRSARDGDIGAVFGI 653
Query: 656 SFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATK 703
FP + GG + DA+G + +L++ + LYG + P L A +
Sbjct: 654 GFPPFLGGPFRYMDALGPGEMVATLQRLAALYGPRYAPCEQLVRMAER 701
>gi|281354037|gb|EFB29621.1| hypothetical protein PANDA_003730 [Ailuropoda melanoleuca]
Length = 700
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 241/705 (34%), Positives = 370/705 (52%), Gaps = 55/705 (7%)
Query: 32 IVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVV 91
+V G+K+ +A + VKAIV+ G G+FS G DI+ F P + + VV
Sbjct: 5 VVHGIKEGLRKAITDHTVKAIVICGADGKFSAGADIHNF-------SAPGKPGLVLGHVV 57
Query: 92 NLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQRLP 148
+ I+ +KP VAA++GLALGGGLELA+GCH RIA + Q+G PE+TLG++PG TQ LP
Sbjct: 58 DEIQRNEKPTVAAIQGLALGGGLELALGCHYRIAHAEAQIGFPEVTLGLLPGARGTQLLP 117
Query: 149 RLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS---EELLKVS-RLWALDIAARR--- 201
RL+G+ A++++ + I ++E KLG++D +V S EE +K++ R+ + +RR
Sbjct: 118 RLIGVPAALDLITSGRHILADEALKLGILDEIVNSDPVEEAIKLAERISDQPLESRRLCN 177
Query: 202 KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVL 261
KP I+SL D + SEA L+ +K P + C+ ++ + + G+
Sbjct: 178 KP-IQSLPNMDSI--FSEAF-------LKMRKQHPGCLSQETCVRAVQAAVQYPYEVGLK 227
Query: 262 KEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK---PRGVRKVAVIGGGLMGS 318
KE ++F L +R L +VFFA+R SK + K + V V+G G MG
Sbjct: 228 KEEELFMYLQKSGQARALQYVFFAERNVSKWSTPSGASWKTAVAHHISSVGVVGLGTMGR 287
Query: 319 GIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLD 378
GI + I V+ E + K ++ E + L+ + +++ K L
Sbjct: 288 GIVISLAKAKIPVIAVESDK----KQLEVAEKIISSLLEKEASKMQHSSHPWLGPKPRLT 343
Query: 379 YS--EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQD 436
S E VD+VIEAV E + LK+++F+EL C P L TNTS +D++ + T
Sbjct: 344 TSMKELGGVDLVIEAVFEEINLKKQVFAELSAVCKPEAFLCTNTSALDIDEIASSTDRPH 403
Query: 437 RIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFF 496
+IG HFFSPAHVM LLEI+ + +S I +M + K IKK+ VVVGNC GF NR
Sbjct: 404 LVIGTHFFSPAHVMKLLEIIPGQYSSPTTIATVMNLSKKIKKIGVVVGNCFGFVGNRMLK 463
Query: 497 PYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVA-------AATSKEFDK 549
Y L+ G +D + FGL +GPF++ DLAG + T +
Sbjct: 464 AYYNQTYFLLEEGSKPEGVDQVLEEFGLKMGPFRVSDLAGLDIGWKSRQGQGLTGPKLPS 523
Query: 550 AFPDRS----FQSPLVDLLLKSGRNGKANGKGLYTYEK--GSKPKPDPSVLPIIEECRRL 603
P R P+ D+L +SGR G+ GKG Y Y+K G KPDP + + + R
Sbjct: 524 GTPARKRGNRRYCPIPDMLCESGRFGQKTGKGWYQYDKPLGRIHKPDPWLSEFLSQYRET 583
Query: 604 SNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGG 663
+I +P +++ EI+E L+ ++NE+ R+LEEG+ +D + G +P +RGG
Sbjct: 584 YHI----EPRIISQDEILERCLYSLINEAFRILEEGMAAAPEHIDVIYLHGYGWPRHRGG 639
Query: 664 IVFWADAVGANYVYTSLKKWSQLYGNF--FKPSRFLEERATKGIP 706
+F+A VG V L+K+ + + +P +L++ A+ G P
Sbjct: 640 PMFYASTVGLPTVLEKLQKYYRQNPDIPQLEPCDYLKKLASLGNP 684
>gi|375131587|ref|YP_004993687.1| fatty oxidation complex, alpha subunit Fad [Vibrio furnissii NCTC
11218]
gi|315180761|gb|ADT87675.1| fatty oxidation complex, alpha subunit Fad [Vibrio furnissii NCTC
11218]
Length = 708
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 211/651 (32%), Positives = 350/651 (53%), Gaps = 27/651 (4%)
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
F G D+ + + A + + + + + D P+VAA+ G LGGGLELA+ C
Sbjct: 66 FIAGADVRMLEACTSAPEAQALA-TQGQAMFQQLSDLPFPVVAAIHGPCLGGGLELALAC 124
Query: 121 HARIAAP--KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLG 175
R+ KT+LGLPE+ LG++PG TQRLPRL+GL +++++L K + +++ KLG
Sbjct: 125 DYRVCTDDDKTRLGLPEVMLGLLPGSGGTQRLPRLIGLLPSLDLILTGKQLRAKKAKKLG 184
Query: 176 LIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVL--KLARLQAKK 233
++DA V LL V++ + +D ++K ++ + + R+V+ + ++ +K
Sbjct: 185 VVDACVPHTVLLDVAKRF-IDENGKKKGKVKLTTKEKLMSQTGFGRKVIFDQASKKTEQK 243
Query: 234 TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 293
T N P +A L+VI+ G+ G +G+ EAK F ELVM S+ L +FFA K
Sbjct: 244 TRGNYPAAKAILEVIQHGLEKGMNAGLELEAKRFGELVMTPESKALRSIFFATTEMKK-E 302
Query: 294 NVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEANV 352
N TD P V ++ V+GGGLMG+GI+ + + V +K+V+++ +L +
Sbjct: 303 NGTDA--TPLTVNRIGVLGGGLMGAGISHVSVAKAKVPVRIKDVSNDGILNALNYNYKLF 360
Query: 353 RGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPP 412
R L++ + + L G +D++ F D+VIEAV E + LKQ + +++E
Sbjct: 361 DKQRKRRILSKAQLQAQMSQLSGGIDFTSFNHTDVVIEAVFEDLALKQNMVADIEANAKA 420
Query: 413 HCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTV 472
I ATNTS++ ++ + K + + I+G H+FSP MPL+E++ + TS + I ++ +
Sbjct: 421 STIFATNTSSLPIHHIAAKAARPENIVGLHYFSPVEKMPLVEVIPHDTTSDETISTVVAL 480
Query: 473 GKIIKKVPVVVGNCTGFAVNRAFFPY-SQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQL 531
+ K P+VV +C GF VNR PY ++SA++L++ G + +D A+ FG P+GP L
Sbjct: 481 ARKQGKTPIVVKDCAGFYVNRILAPYMNESAQILMA-GEPIENLDRALLDFGFPVGPITL 539
Query: 532 LDLAGYGVAAATSKEFDKAFPDRSFQSPLV-DLLLKSGRNGKANGKGLYTYEKGSKPKPD 590
LD G + A R FQ P V D LL GR G+ +GKG Y+Y+ K + D
Sbjct: 540 LDEVGVDIGAKIMPILVNELGPR-FQGPDVFDTLLNDGRKGRKSGKGFYSYKGSKKKEVD 598
Query: 591 PSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDA 650
SV +L + P K ++++I + P++NE+ R L+EGI+ D D
Sbjct: 599 KSVY-------KLLKLTPESK---FSDQDIALRCILPMLNEAVRCLDEGIIRSPRDGDIG 648
Query: 651 SVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERA 701
++ G+ FP + GG + D +G + + + ++ YG+ F P L RA
Sbjct: 649 AIFGIGFPPFLGGPFRYMDHIGMKKLVELMNQHAEKYGDRFAPCDGLLTRA 699
>gi|56460101|ref|YP_155382.1| multifunctional fatty acid oxidation complex subunit alpha
[Idiomarina loihiensis L2TR]
gi|81600096|sp|Q5QXM1.1|FADJ_IDILO RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|56179111|gb|AAV81833.1| Fatty oxidation complex, alpha subunit [Idiomarina loihiensis L2TR]
Length = 708
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 250/719 (34%), Positives = 372/719 (51%), Gaps = 44/719 (6%)
Query: 7 TMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEAT--------SRDDVKAIV-LTGN 57
TMEV +DGVA+IT I+ P ++ LKD F E S D VK +V ++G
Sbjct: 8 TMEVRDDGVAVIT-IDVPGESMNT-----LKDSFAEEVGSLMNRLESDDSVKGVVFISGK 61
Query: 58 GGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELA 117
G F G DIN+ A D + + + + IE P+VAA+ G LGGGLELA
Sbjct: 62 PGSFIAGADINMIDGCENAVDAESLARKG-QAMFDRIEQLNVPVVAAINGACLGGGLELA 120
Query: 118 MGCHARIAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGW 172
M CH R+ KT LGLPE+ LG++PG TQRLP LVG+ + + M+L K + +++
Sbjct: 121 MACHVRVCTDNSKTALGLPEVKLGLLPGSGGTQRLPELVGVQQGLTMILTGKELRAKQAL 180
Query: 173 KLGLIDAVVTSEELLKVSRLWALDIAARR-KPWIRSLHRTDKLGSLSEAREVL-KLARLQ 230
K GL+ VV LL V+ AL + KP ++ + + L + R+++ K A Q
Sbjct: 181 KAGLVTEVVPQSILLDVAVEHALKRKPKSTKPPLKGISKV--LEATKFGRDIIFKKASEQ 238
Query: 231 AKKTAP-NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRAT 289
A+K A N P + + EG+ G +G+ KEA+ F EL M S L +FFA
Sbjct: 239 AQKKAQGNYPAIDKIIQTVREGVERGREAGLDKEARSFGELAMTPESYQLRQIFFATTEM 298
Query: 290 SKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTI 348
K G+KP V++V V+GGGLMG GIA I +K++ + + +
Sbjct: 299 KKETGAD--GVKPDSVKRVGVLGGGLMGGGIAYVTAAKAGIPARIKDIAEDGIRHALHYS 356
Query: 349 EANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEK 408
+ V R + + + + ML G LDYS F+ D+VIEAV E + LKQK+ +++E+
Sbjct: 357 YERLDKKVKRRHMRRAELEKTMLMLSGSLDYSGFERTDVVIEAVFEDLNLKQKMVADVEE 416
Query: 409 ACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILD 468
I ATNTS++ + + K +++IG H+FSP MPL EI+ TS + I
Sbjct: 417 HADESTIFATNTSSLPITQIAAKAKRPEQVIGLHYFSPVDKMPLAEIITHPGTSDKTIAT 476
Query: 469 LMTVGKIIKKVPVVVGNCTGFAVNRAFFPY-SQSARLLVSLGVDVFRIDSAIRSFGLPIG 527
+++ K K P+VV + GF VNR PY +++ARLL++ G + ID + FG P+G
Sbjct: 477 TVSLAKKQGKTPIVVKDGAGFYVNRILAPYMNEAARLLLA-GEPIEHIDKTLVKFGFPVG 535
Query: 528 PFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP-LVDLLLKSGRNGKANGKGLYTYEKGSK 586
P LLD G VAA + K DR F++P + L+ R GK N KG Y Y K K
Sbjct: 536 PITLLDEVGIDVAAKVAPVLVKELGDR-FEAPEAFEKLIDDDRKGKKNQKGFYQYGKSVK 594
Query: 587 PKP-DPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRAS 645
KP D SV ++ +I P S + EI+++ L P++NE+ L+E I+
Sbjct: 595 GKPVDTSVYSLL-------DIDPNE---SKSADEIIDICLLPMLNEAAYCLQEEIIRSPR 644
Query: 646 DLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
D D ++ G+ FP + GG + D+ G + L+K + G + P+ L++ G
Sbjct: 645 DGDIGAIFGIGFPPFLGGPFRYMDSQGLETIVNKLEKLAAERGERYTPAPLLKQMLENG 703
>gi|365971501|ref|YP_004953062.1| Fatty acid oxidation complex subunit alpha [Enterobacter cloacae
EcWSU1]
gi|365750414|gb|AEW74641.1| Fatty acid oxidation complex subunit alpha [Enterobacter cloacae
EcWSU1]
Length = 715
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 231/710 (32%), Positives = 364/710 (51%), Gaps = 39/710 (5%)
Query: 13 DGVAIITL--INPPVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA+IT+ N +N L ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVITVDVPNEKMNTLKAEFGVQVRAMLKQIRENKAIRGLVFISAKPDNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA--P 127
+ A + + +++ I P++AA+ G LGGGLELA+ CH+RI
Sbjct: 74 IARAQNAQEAEELARQGQQVMAE-IHALSIPVIAAIHGACLGGGLELALACHSRICTDDA 132
Query: 128 KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 184
KT LGLPE+ LG++PG TQRLPRLVG+S A+EM+L K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALEMILTGKQLRARQALKAGLVDEVVPHA 192
Query: 185 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 242
LL+ A+++A + + R L +++ G L + +KT N P +
Sbjct: 193 ILLEA----AVELALKGRQAKRPLPVRERVLAGPLGRTLLFSMAGKKTEQKTKGNYPAAK 248
Query: 243 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 302
L+VIE G+ G SG EAK F EL M S+ L ++FFA K P +P
Sbjct: 249 RILEVIEVGLSQGSSSGYAAEAKAFGELAMTPQSQALRNIFFASTEVKKDPGSE---AQP 305
Query: 303 RGVRKVAVIGGGLMGSGIA-TAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 361
+ + V+GGGLMG GI+ + V +K++N++ + ++ N+ V R +
Sbjct: 306 APLHAIGVLGGGLMGGGISFVTASKGKLPVRIKDINAKGINHALQYSWQNLDQKVKRRHI 365
Query: 362 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 421
++ + L ++ G DYS F D+VIEAV E + LKQ++ +++E+ C PH I A+NTS
Sbjct: 366 KANERDKTLALISGTTDYSGFAHRDLVIEAVFEDLALKQQMVADVEQHCAPHTIFASNTS 425
Query: 422 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 481
++ + + + +++IG H+FSP MPL+E++ TS Q + ++ + K+ K P+
Sbjct: 426 SLPIGDIAARAQRPEQVIGLHYFSPVEKMPLVEVIPHASTSPQTVATVVKLAKMQGKTPI 485
Query: 482 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAA 541
VV + GF VNR PY A L++ G + +D A+ FG P+GP QLLD G
Sbjct: 486 VVADKAGFYVNRILAPYINEAMRLLTEGEKIEHVDEALVKFGFPVGPIQLLDEVGIDTGT 545
Query: 542 ATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DPSVLPI 596
+ A+ DR F P +V +LK R G+ N +G Y Y KG K K DPSV +
Sbjct: 546 KIIPVLEDAYGDR-FSPPANIVSAILKDDRKGRKNERGFYLYGAKGRKSKKQVDPSVYGL 604
Query: 597 IEECRRLSNIMPGGK--PISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLG 654
I + GK P+ E+ ++ M+ NE+ R E ++ A D D +V G
Sbjct: 605 IPTTGQ-------GKLSPVQCAERCVMMML-----NEAARCFGEQVIKSARDGDIGAVFG 652
Query: 655 MSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+ FP + GG + D +GA V +++ + YG F P L + A +G
Sbjct: 653 IGFPPFLGGPFRYMDTLGAGEVVAIMQRLASQYGPRFTPCDELLQMAERG 702
>gi|260769022|ref|ZP_05877956.1| enoyl-CoA hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase/3-hydroxyacyl-CoA
dehydrogenase/3-hydroxybutyryl-CoA epimerase [Vibrio
furnissii CIP 102972]
gi|260617052|gb|EEX42237.1| enoyl-CoA hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA
isomerase/3-hydroxyacyl-CoA
dehydrogenase/3-hydroxybutyryl-CoA epimerase [Vibrio
furnissii CIP 102972]
Length = 708
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 211/651 (32%), Positives = 350/651 (53%), Gaps = 27/651 (4%)
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
F G D+ + + A + + + + + D P+VAA+ G LGGGLELA+ C
Sbjct: 66 FIAGADVRMLEACTSAPEAQALA-TQGQAMFQQLSDLPFPVVAAIHGPCLGGGLELALAC 124
Query: 121 HARIAAP--KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLG 175
R+ KT+LGLPE+ LG++PG TQRLPRL+GL +++++L K + +++ KLG
Sbjct: 125 DYRVCTDHDKTRLGLPEVMLGLLPGSGGTQRLPRLIGLLPSLDLILTGKQLRAKKAKKLG 184
Query: 176 LIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVL--KLARLQAKK 233
++DA V LL V++ + +D ++K ++ + + R+V+ + ++ +K
Sbjct: 185 VVDACVPHTVLLDVAKRF-IDENGKKKGKVKLTTKEKLMSQTGFGRKVIFDQASKKTEQK 243
Query: 234 TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 293
T N P +A L+VI+ G+ G +G+ EAK F ELVM S+ L +FFA K
Sbjct: 244 TRGNYPAAKAILEVIQHGLEKGMNAGLELEAKRFGELVMTPESKALRSIFFATTEMKK-E 302
Query: 294 NVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEANV 352
N TD P V ++ V+GGGLMG+GI+ + + V +K+V+++ +L +
Sbjct: 303 NGTDA--TPLTVNRIGVLGGGLMGAGISHVSVAKAKVPVRIKDVSNDGILNALNYNYKLF 360
Query: 353 RGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPP 412
R L++ + + L G +D++ F D+VIEAV E + LKQ + +++E
Sbjct: 361 DKQRKRRILSKAQLQAQMSQLSGGIDFTSFNHTDVVIEAVFEDLALKQSMVADIEANAKA 420
Query: 413 HCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTV 472
I ATNTS++ ++ + K + + I+G H+FSP MPL+E++ + TS + I ++ +
Sbjct: 421 STIFATNTSSLPIHHIAAKAARPENIVGLHYFSPVEKMPLVEVIPHDTTSDETISTVVAL 480
Query: 473 GKIIKKVPVVVGNCTGFAVNRAFFPY-SQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQL 531
+ K P+VV +C GF VNR PY ++SA++L++ G + +D A+ FG P+GP L
Sbjct: 481 ARKQGKTPIVVKDCAGFYVNRILAPYMNESAQILMA-GEPIENLDRALLDFGFPVGPITL 539
Query: 532 LDLAGYGVAAATSKEFDKAFPDRSFQSPLV-DLLLKSGRNGKANGKGLYTYEKGSKPKPD 590
LD G + A R FQ P V D LL GR G+ +GKG Y+Y+ K + D
Sbjct: 540 LDEVGVDIGAKIMPILVNELGPR-FQGPDVFDTLLNDGRKGRKSGKGFYSYKGSKKKEVD 598
Query: 591 PSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDA 650
SV +L + P K ++++I + P++NE+ R L+EGI+ D D
Sbjct: 599 KSVY-------KLLKLTPESK---FSDQDIALRCILPMLNEAVRCLDEGIIRSPRDGDIG 648
Query: 651 SVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERA 701
++ G+ FP + GG + D +G + + + ++ YG+ F P L RA
Sbjct: 649 AIFGIGFPPFLGGPFRYMDHIGMKKLVELMNQHAEKYGDRFAPCDGLLTRA 699
>gi|326916634|ref|XP_003204611.1| PREDICTED: trifunctional enzyme subunit alpha, mitochondrial-like
[Meleagris gallopavo]
Length = 770
Score = 329 bits (843), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 233/733 (31%), Positives = 372/733 (50%), Gaps = 46/733 (6%)
Query: 2 AAPRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVK-AIVLTGNG 58
A V+ ++ D VA++ P VN L+ + A + E + + VK A++++
Sbjct: 44 ARTHVSYDIKGD-VAVVRFNTPNSKVNTLSKQLNAEFTEVMNEIWANEAVKSAVLISSKP 102
Query: 59 GRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAM 118
G F G DI++ + +V+ + +++ IE KPIVAA+ G LGGGLE+A+
Sbjct: 103 GSFIAGADIDMIAACKTSQEVTQLSQEGQKML-EKIEQSPKPIVAAISGSCLGGGLEVAI 161
Query: 119 GCHARIAAP--KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWK 173
CH RIA KT LG PE+ LG++PG TQRLP++VGL A +MML ++I ++ K
Sbjct: 162 ACHYRIATKDRKTILGTPEVLLGLLPGAGGTQRLPKMVGLPAAFDMMLTGRNIHADRAKK 221
Query: 174 LGLIDAVV-------------TSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEA 220
+GL+D +V T E L +V+ +A +A + RS K+ + A
Sbjct: 222 MGLVDQLVDPLGPGVKAPEARTIEYLEEVAIGFARGLANKTVSAKRSKGLVQKITDYAMA 281
Query: 221 REVLKLARLQAKKTAPNMPQHQA---------CLDVIEEGIVHGGYSGVLKEAKVFKELV 271
L R Q KT + Q Q ++V++ G+ G +G L E++ F L
Sbjct: 282 ---LPFVRQQVYKTVESKVQKQTKGLYPAPLKIIEVVKAGLDQGRETGYLTESQNFGHLA 338
Query: 272 MLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYV 331
M + S+ L+ ++ Q K G R V+ +AV+G GLMG+GIA + +
Sbjct: 339 MTNESKALIGLYHGQVRCKK----NKFGAPQREVKTLAVLGAGLMGAGIAQVSVDKGLKT 394
Query: 332 VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEA 391
+LK+ + L +G + + + G V + LT + ++ L + G LDY F+ DMVIEA
Sbjct: 395 ILKDTTQQGLDRGQQQVFKGLNGKVKKKSLTSFERDSILSNMTGQLDYKGFEKADMVIEA 454
Query: 392 VIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMP 451
V E + +K K+ E+E PPHCI A+NTS + +N + + D++IG H+FSP M
Sbjct: 455 VFEDINIKHKVLKEVEAVIPPHCIFASNTSALPINQIAAVSQRPDKVIGMHYFSPVDKMQ 514
Query: 452 LLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVD 511
LLEI+ T++TS + VG KV +VV + GF R P ++ G+D
Sbjct: 515 LLEIITTDKTSQDTAASAVAVGLKQGKVVIVVKDGPGFYTTRCLGPMLAEVGRVLQEGID 574
Query: 512 VFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGR 569
++D+ +FG P+G L+D G VA +++ KAF +R L L+++ G
Sbjct: 575 PKKVDAISTAFGFPVGAATLIDEVGVDVATHVAEDLGKAFGERFGGGSIGLFKLMVQKGF 634
Query: 570 NGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVV 629
G+ GKG Y Y++G K + S + I L+ KP T+++I ++ V
Sbjct: 635 LGRKAGKGFYIYQEGVKNRSLNSGMDEI-----LAQFKLPAKPEVCTDEDIQMRLVTRFV 689
Query: 630 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 689
NE+ L+EGI+ + D +V G+ FP GG +AD+ GA + L+K+ +YG+
Sbjct: 690 NEAAMCLQEGILSNPVEGDIGAVFGLGFPPCLGGPFRYADSYGAKQLVDKLRKYEAVYGS 749
Query: 690 FFKPSRFLEERAT 702
F P + L + A
Sbjct: 750 QFTPCQLLLDYAN 762
>gi|219128384|ref|XP_002184394.1| peroxisomal bifunctional enzyme [Phaeodactylum tricornutum CCAP
1055/1]
gi|217404195|gb|EEC44143.1| peroxisomal bifunctional enzyme [Phaeodactylum tricornutum CCAP
1055/1]
Length = 767
Score = 329 bits (843), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 242/707 (34%), Positives = 360/707 (50%), Gaps = 82/707 (11%)
Query: 49 VKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSL---------MPDVSVEL--VVNLIEDC 97
V +++LTG G FS G D+ F + A ++ P + L VV IE C
Sbjct: 58 VTSLILTGGGPNFSAGADLTEFASLIPAAATTVPTPSDVGHHHPHAAPSLIDVVTAIEAC 117
Query: 98 KKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLS 154
+KPIVAA++G+ LGGG ELA+ CHAR+A + +LGLPE+ +GVIPG TQRLP+LVGL
Sbjct: 118 RKPIVAAIDGVCLGGGCELALACHARVATARARLGLPEVHVGVIPGAGGTQRLPKLVGLR 177
Query: 155 KAIEMMLLSKSITSEEGWKLGLIDAVV---TSEELLKVSRLWALDIAARRKPWIRSLHRT 211
+A+ M+L ++++ ++GL+DA+ T++ L +R WA P IR
Sbjct: 178 QALPMILQGSTVSAASALRMGLLDAIAPEATADSLRTTARQWA--AYGEVLPTIRRTGDL 235
Query: 212 DKLGSLSEAREVLKLARLQAKKTAPNMPQH--QACLDVIEEG---IVHGGYSGVLKEAKV 266
+ S +EA +L +A L + P + H +A + + I HG
Sbjct: 236 QRPESPAEAHALLHVAEL----SLPPLGSHGMRAAIQALRASGTPIQHG----------- 280
Query: 267 FKELVMLDTSRGLVHVFFA----QRATSKVPNVTDIGLKPRGVRK---------VAVIGG 313
+ R HVFFA Q+ S V N P G+ VAV+G
Sbjct: 281 ---MRRSPQGRARRHVFFATRRAQKVWSPVSNAVPTAGPPHGLWSKDDAQSAVPVAVVGA 337
Query: 314 GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKML 373
G MGSGIA + +V L +V++ L KG++ ++ + +V R +L + L
Sbjct: 338 GTMGSGIALVLLQAGFHVTLVDVHAPALAKGMEFLKRTLASMVQRRQLKPTQLTALEAKL 397
Query: 374 KGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTS 433
+ + E +V+EAV+E + +KQ IF+ L+K PP +L +NTST+D++ + S
Sbjct: 398 RATSNLQELSQCLLVVEAVVEKLIVKQSIFATLDKVTPPTALLLSNTSTLDIDAMASAVS 457
Query: 434 SQDR--IIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAV 491
S+ R G HFFSPAH M L+EIVR TS L + K I K+ VVVGNC GF
Sbjct: 458 SRRRGLFAGWHFFSPAHRMKLVEIVRGSATSDDTTALLQALTKQIGKIGVVVGNCDGFCG 517
Query: 492 NRAFFPYS-QSARLLVSLGVDVFRIDSAIRS-FGLPIGPFQLLDLAGYGVAA-------- 541
NR PYS ++ LL V D AIR +G+ +GPF++ DLAG V
Sbjct: 518 NRMLKPYSAETVLLLTETQTTVAAQDYAIRGVYGMALGPFEMADLAGNDVGYNIRVERQW 577
Query: 542 ATSKEFDKAFPDRSFQ-SPLVDLLLKS-GRNGKANGKGLYTYE----KGSKPKPDPSVLP 595
A D P+R + + L D+++ GR G+ GKG Y Y+ KG KP P +
Sbjct: 578 ARRARDDPLPPNRPARYTELPDVMISDYGRLGQKVGKGWYDYDSNIGKGRKPLPSSEMDA 637
Query: 596 IIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGM 655
+I RR + P P ++ EI+E +L+P++NE + LEE IV + SD+D V G
Sbjct: 638 LI---RRY--LAPKPSP-ALVAAEIIERVLYPLINEGFKCLEESIVRQPSDIDVVYVYGY 691
Query: 656 SFPSYRGGIVFWAD-AVGANYVYTSLKKWSQLY--GNFFKPSRFLEE 699
+P +RGG ++ AD +G + +L++ S+ + + PS L E
Sbjct: 692 GWPVWRGGPMYAADHEIGLPRLLRTLRELSKQFPTTEHYVPSALLVE 738
>gi|403270079|ref|XP_003927024.1| PREDICTED: peroxisomal bifunctional enzyme isoform 2 [Saimiri
boliviensis boliviensis]
Length = 698
Score = 329 bits (843), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 230/698 (32%), Positives = 364/698 (52%), Gaps = 49/698 (7%)
Query: 36 LKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIE 95
+++ ++A + +KAIV+ G G+FS G DI+ F G +S+ VV+ I+
Sbjct: 7 IEEGLQKAVTDHTIKAIVICGAEGKFSAGADIHGFSAPRTLG-------LSLGSVVDEIQ 59
Query: 96 DCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVG 152
KP+VAA++G+ALGGGLELA+GCH RIA + Q+GLPE+TLG++PG TQ LPRL+G
Sbjct: 60 RNVKPVVAAIQGMALGGGLELALGCHYRIAHAEAQVGLPEVTLGLVPGARGTQLLPRLIG 119
Query: 153 LSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARR---KPWIRSLH 209
+ A++++ + I + E KLG++D VV S+ L + R A+R +P
Sbjct: 120 VPAALDLITTGRYILAGEALKLGILDKVVNSDPLEEAIRF------AQRVSDQPLESRRL 173
Query: 210 RTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKE 269
+ SL + A L+ +K P +AC+ ++ + + G KE ++F+
Sbjct: 174 FNKPIPSLPNMDTIFSEALLKMRKQHPGCLAQEACVRAVQAAVQYPYEVGSKKEEELFQY 233
Query: 270 LVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK---PRGVRKVAVIGGGLMGSGIATAHIL 326
L+ +R L + F A+R +K + + K + + V V+G G MG GI +
Sbjct: 234 LLQSGQARALQYAFLAERKANKWSSPSGASWKTASAQPISSVGVVGLGTMGRGIVISFAR 293
Query: 327 NNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS--EFKD 384
I V+ + + L K I + + ++ ++ +A K L S E
Sbjct: 294 AGIPVIAVDSDKNQLATANKIITSVLEKEASK----MQQSGHAWSGPKPRLTSSMKELGG 349
Query: 385 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFF 444
VD+VIEAV E + LK+++F+EL C P L TNTS +D++ + TS +IG HFF
Sbjct: 350 VDLVIEAVFEDMSLKKQVFAELSAVCKPEAFLCTNTSALDVDELASSTSRPHLVIGTHFF 409
Query: 445 SPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARL 504
SPAH+M LLE++ + +S I +M + K IKK+ VVVGNC GF NR PY
Sbjct: 410 SPAHIMKLLEVIPSRYSSPTTIATVMNLSKKIKKIGVVVGNCFGFVGNRMLNPYYNQTYF 469
Query: 505 LVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFP------------ 552
L+ G +D + FG +GPF++ DLAG V + K P
Sbjct: 470 LLEEGSKPEEVDQVLEEFGFKMGPFRVSDLAGLDVGWKSRKGQGLTGPTLPPGTPARKRG 529
Query: 553 DRSFQSPLVDLLLKSGRNGKANGKGLYTYEK--GSKPKPDPSVLPIIEECRRLSNIMPGG 610
+R + P+ D+L + GR G+ GKG Y Y+K G KPDP + + + R +I
Sbjct: 530 NRRY-CPIPDVLCELGRFGQKTGKGWYQYDKPLGRIHKPDPWLSTFLSQYRETHHI---- 584
Query: 611 KPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADA 670
+P ++ EI+E L+ ++NE+ R+L EGI +D + G +P +RGG +F+A
Sbjct: 585 EPRIISRDEILERCLYSLINEAFRILGEGIAASPEHIDVVYLHGYGWPRHRGGPMFYAST 644
Query: 671 VGANYVYTSLKKWSQLYGNF--FKPSRFLEERATKGIP 706
VG V L+K+ + + +PS +L++ A++G P
Sbjct: 645 VGLPTVLEKLQKYYRQNPDIPQLEPSDYLKKLASQGNP 682
>gi|297621495|ref|YP_003709632.1| Fatty acid oxidation complex, alpha subunit FadB [Waddlia
chondrophila WSU 86-1044]
gi|297376796|gb|ADI38626.1| Fatty acid oxidation complex, alpha subunit FadB [Waddlia
chondrophila WSU 86-1044]
gi|337293681|emb|CCB91668.1| Fatty acid oxidation complex subunit alpha [Waddlia chondrophila
2032/99]
Length = 714
Score = 329 bits (843), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 218/706 (30%), Positives = 366/706 (51%), Gaps = 31/706 (4%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR-FSGGFDINV 69
+G+A + P VN +++ ++ L E +KA+V+T + F G D+
Sbjct: 12 NGIARLAFDYPGEKVNKISLEVLEELDAVLEGIKDNQQIKALVITSAKEKIFIAGADLKS 71
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA--AP 127
F+++ D++ V N +E+ P +A ++G+ LGGGLELA+ C R+ +
Sbjct: 72 FERLFKNFDLAEGMIKKGHSVYNKLEELPFPSIAVIDGVCLGGGLELALACTYRVVGDSS 131
Query: 128 KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 184
KT LGLPE LG+ PG TQRLPRLVGL + ++M+L + + +++ +K+ L DA+ SE
Sbjct: 132 KTTLGLPETNLGIFPGWGGTQRLPRLVGLMEGLKMVLTGRPVDAKKAFKIHLADAIFPSE 191
Query: 185 ELLKVSRLWALDI-AARRKPWIRSLHRTDKLGSLSEAREVLKLA-------RLQAKKTAP 236
+ + + + +I ++ K + ++ L SL R + A R +KT
Sbjct: 192 FMKEKTDAFVEEILTSKGKEKVLERRKSRGLMSLLFERNPIGRAFVFWQSRRSVLQKTKG 251
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELV--MLDTSRGLVHVFFAQRATSKVPN 294
P A LD+I+ G+ KE + F + + + L+++FF K P
Sbjct: 252 QYPSPLAALDLIQNTYTMPLKKGLKKEVEAFVKSMSGAFQCAPNLIYIFFNSEQMKKDPG 311
Query: 295 VTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRG 354
+ + V+ V V+G G+MGSGIA ++ V +K+VN + + G K+ +
Sbjct: 312 MIGGQATGKEVKSVGVLGAGVMGSGIAWLMSYRDLPVRMKDVNWKAVGSGFKSAWDTYKV 371
Query: 355 LVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHC 414
L+ + KL +AN ++ G +DY+ F +D VIEA +E++ LK KI ELE P
Sbjct: 372 LIKKRKLKPAQANRKFHLISGTIDYTGFDKLDFVIEAAVENLELKHKILKELEANVRPDA 431
Query: 415 ILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGK 474
I+ATNTS++ ++ + +R++G HFF+P MPL+EIV E+TS + + + + +
Sbjct: 432 IIATNTSSLTIDELAPALKHPERLVGMHFFNPPARMPLVEIVSGEKTSPEAVQTVFELCQ 491
Query: 475 IIKKVPVVVGNCTGFAVNRAF-FPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLD 533
+KK PVVVG+C+GF VNR F + + R+L GV R+D FGLP+ PF L D
Sbjct: 492 RLKKTPVVVGDCSGFLVNRVFAHGFVEIMRMLEE-GVPQERLDKLFLKFGLPMAPFVLAD 550
Query: 534 LAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSV 593
G V K F+ A+ R L++ L + G+ GKG Y Y+K SK K +P +
Sbjct: 551 EIGNDVNLKAMKSFESAYGIRMEVPKLLEKLNEKQLYGRKVGKGFYIYDKKSK-KINPEI 609
Query: 594 LPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVL 653
++ +P +++++ + ++ ++ ++NE+ R L+E ++ LD A V
Sbjct: 610 ----------TSFLPHQNGMNISDTDAIDRVMLAMINEAARCLQENVIHNPGYLDMALVF 659
Query: 654 GMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEE 699
G+ FP +RGG++ +AD++G + YG F P L+E
Sbjct: 660 GVGFPPFRGGLLRYADSIGIEKLMDKYGHLVSTYGERFVPCEKLKE 705
>gi|224583123|ref|YP_002636921.1| multifunctional fatty acid oxidation complex subunit alpha
[Salmonella enterica subsp. enterica serovar Paratyphi C
strain RKS4594]
gi|224467650|gb|ACN45480.1| putative fatty acid oxidation complex alpha subunit [Salmonella
enterica subsp. enterica serovar Paratyphi C strain
RKS4594]
Length = 708
Score = 329 bits (843), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 226/708 (31%), Positives = 358/708 (50%), Gaps = 37/708 (5%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+
Sbjct: 7 DNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINM 66
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 67 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 125
Query: 128 KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 184
KT LGLPE+ LG++PG TQRLPRLVG+S A++M+L K + + + K GL+D VV
Sbjct: 126 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDVVPQT 185
Query: 185 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 242
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 186 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 241
Query: 243 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 302
+DVIE G+ G SG EA+ F EL M S+ L +FFA K P +D P
Sbjct: 242 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAIFFASTKVKKDPG-SDAPPGP 300
Query: 303 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 362
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 301 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 359
Query: 363 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 422
+ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 360 ASERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCAAHTIFASNTSS 419
Query: 423 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 482
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 420 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 479
Query: 483 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAA 542
V + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 480 VSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVGIDTGTK 539
Query: 543 TSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DPSVLPII 597
+ A+ + F +P +V +L R G+ NG+G Y Y EKG K K DP++ +I
Sbjct: 540 IIPVLEAAYGE-CFSAPANVVASILNDDRKGRKNGRGFYLYGEKGRKSKKQVDPAIYKLI 598
Query: 598 --EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGM 655
+ RLS +++ E + ++NE+ R +E ++ A D D +V G+
Sbjct: 599 GVQGQSRLS------------AQQVAERCVMLMLNEAARCFDEKVIRSARDGDIGAVFGI 646
Query: 656 SFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATK 703
FP + GG + DA+G + +L++ + LYG + P L A +
Sbjct: 647 GFPPFLGGPFRYMDALGPGEMVATLQRLAALYGPRYAPCEQLVRMAER 694
>gi|336314685|ref|ZP_08569601.1| fatty oxidation complex, alpha subunit FadJ [Rheinheimera sp. A13L]
gi|335880984|gb|EGM78867.1| fatty oxidation complex, alpha subunit FadJ [Rheinheimera sp. A13L]
Length = 713
Score = 329 bits (843), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 242/713 (33%), Positives = 364/713 (51%), Gaps = 49/713 (6%)
Query: 14 GVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSGGFDINVFQ- 71
GV + + +N L +K E + D+K +V+ +G F G DI++
Sbjct: 22 GVISMDVAGESMNVLKAAFADEIKSLLSEIKNNKDIKGLVIISGKPDSFIAGADISMLDG 81
Query: 72 --KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A D+ M +LV N +E P+VAA+ G LGGGLELA+ CHAR+A
Sbjct: 82 CTTAQQAEDIGRMG----QLVFNQLEALSIPLVAAIHGPCLGGGLELALACHARVATTDN 137
Query: 128 KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 184
KT LGLPE+ LG++PG TQRLPRLVG+ KA++M+L K + + + K+GL+DAVV
Sbjct: 138 KTVLGLPEVQLGLLPGSGGTQRLPRLVGIQKALDMILTGKQLRAAQAKKIGLVDAVVPKS 197
Query: 185 ELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARL----QAKK-----TA 235
LL+ A+ +A + KP R + KL + + E R QA+K T
Sbjct: 198 ILLEA----AVQLALKGKPAARDV----KLNFVGKVLEKTPFGRAIVFSQAEKQTLAKTH 249
Query: 236 PNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV 295
N P L I+ G+ G G+ EAK F EL M S+ L +FFA K
Sbjct: 250 GNYPAPLKILKAIKAGVDGGFNKGLDVEAKAFGELCMTSESKALRSLFFATTQMKKETGA 309
Query: 296 TDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEANVRG 354
D+ PR V K A++GGGLMG GIA + V +K+++ + + +K + +
Sbjct: 310 GDV--VPRKVHKAAILGGGLMGGGIANVTATKAGVPVRIKDISQQGISNAMKYSYSLLEK 367
Query: 355 LVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHC 414
+ + +T+ + + +L G DYS F DVD+V+EAV E + LKQ++ +++E C H
Sbjct: 368 KLRKRFVTKTEVQKQMSLLTGTTDYSGFHDVDLVVEAVFEDLNLKQQMVADIETNCSEHT 427
Query: 415 ILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGK 474
+ A+NTS++ + + K + + +IG H+FSP MPL+E++ ++TSA+ I + +
Sbjct: 428 VFASNTSSLPIGQIAAKAARPENVIGLHYFSPVDKMPLVEVIAHDKTSAETIATTVAFAR 487
Query: 475 IIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDL 534
K P+VV + GF VNR Y A ++ G V +D A+ FG P+GP LLD
Sbjct: 488 KQGKTPIVVKDGAGFYVNRILALYMNEAANILLEGEPVEALDKALVKFGFPVGPITLLDE 547
Query: 535 AGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKP--DPS 592
G V A S K +R D LL GR G+ KG Y Y +K K D S
Sbjct: 548 VGIDVGAKISPILLKELGERFAAPAAFDRLLADGRKGRKAEKGFYLYGAKAKGKKQVDAS 607
Query: 593 VLPI--IEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDA 650
V I + +L GG I++ + +V+M+ NE+ R LEEGI+ A D D
Sbjct: 608 VYTILGLNPAAKL-----GGDQIAL--RCVVQML-----NEAVRCLEEGIISSARDGDIG 655
Query: 651 SVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATK 703
++ G+ FP + GG + D +GA + L+ + +G F PS+ L E+A +
Sbjct: 656 AIFGIGFPPFLGGPFRYIDQMGAATLVAHLRSFESRFGARFAPSKLLLEKAEQ 708
>gi|404318260|ref|ZP_10966193.1| 3-hydroxyacyl-CoA dehydrogenase [Ochrobactrum anthropi CTS-325]
Length = 659
Score = 329 bits (843), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 227/670 (33%), Positives = 342/670 (51%), Gaps = 40/670 (5%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
DG+ ++T+ NPPVNA + + GL A++ ++A VL+G G F GG DI F K
Sbjct: 17 DGILVVTIDNPPVNATSAEVRKGLAAAIHHASATAAIRATVLSGAGKIFIGGADIREFGK 76
Query: 73 VHGAGDVSLMPDVSVEL--VVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQ 130
P V L V+ +IE+ KP+VA + G ALGGGLE+A+ HARIA+
Sbjct: 77 ----------PPVEPTLPDVITIIENADKPVVATINGPALGGGLEVALAAHARIASTSAS 126
Query: 131 LGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELL 187
LPE+ LG++PG TQRLPRL+G A++M+ + I +E +L LID + +
Sbjct: 127 FALPEVKLGIVPGAGGTQRLPRLIGSLAALDMIATGRQIAPDEALQLDLIDRISDGD--- 183
Query: 188 KVSRLWALDIAARRKPWIRSLH---RTDKLGSLSEAR-EVLKLAR-LQAKKTAPNMPQHQ 242
V+ AL A KP R+ + +A+ ++LK AR A A + Q
Sbjct: 184 LVADAIALAHALVGKPLRRTCDLPVTAPDAATFEQAKAKILKKARGATAPGEAARLVQLS 243
Query: 243 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 302
+ + E G+ +E F L + + L H+FFA+RA KV + KP
Sbjct: 244 TTISIAE---------GLAEERTTFIRLRDSEEAAALRHLFFAERAAGKVEGME---AKP 291
Query: 303 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 362
+ + + G GLMGSGIA A + V+ E +E KG I ++ V G+L+
Sbjct: 292 LALSTIGIAGTGLMGSGIAVACLAAGYTVIGYETTAEAAAKGHARISDMIQKAVDTGRLS 351
Query: 363 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 422
+ A+ L D + D ++VIEAV + +K +F EL+ PP ILATNTS
Sbjct: 352 TEAADAQRAKLSVSADMAALADANLVIEAVFDDFTVKASLFRELDALLPPATILATNTSY 411
Query: 423 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 482
++ + + T+ DR++G HFFSPA++M LLE+VR TS + + + + IKK+P+V
Sbjct: 412 LNPDELAAVTNRTDRVLGLHFFSPANIMRLLEVVRCAETSDETLATGIAFARKIKKLPIV 471
Query: 483 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAA 542
G C GF NR F Y A +++ G ID A+ ++G P+G F + D+AG +A A
Sbjct: 472 TGVCEGFIGNRMFSAYRTEAEKMLAEGAYPEDIDRAMEAYGFPMGLFAVYDMAGLEIAWA 531
Query: 543 TSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRR 602
K + + D L ++GR G G G Y Y G + DP V +I++ R
Sbjct: 532 RRKRAAASRDPNLPYFDVADKLCEAGRFGCKAGLGWYRYADGVRTS-DPDVHALIDDYRA 590
Query: 603 LSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRG 662
+ I+P S +++ I++ +L + E +LEEGI + D+D V G SFPS +G
Sbjct: 591 RNAIVPR----SFSDEAIMQRLLAAMAYEGEALLEEGIARHSDDIDLVLVNGYSFPSIKG 646
Query: 663 GIVFWADAVG 672
G +F G
Sbjct: 647 GPLFATRQTG 656
>gi|296104019|ref|YP_003614165.1| multifunctional fatty acid oxidation complex subunit alpha
[Enterobacter cloacae subsp. cloacae ATCC 13047]
gi|295058478|gb|ADF63216.1| multifunctional fatty acid oxidation complex subunit alpha
[Enterobacter cloacae subsp. cloacae ATCC 13047]
Length = 715
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 225/707 (31%), Positives = 353/707 (49%), Gaps = 33/707 (4%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA+IT+ P +N L +++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVITIDVPDEKMNTLKAEFGVQVREMLKQIRENKAIRGLVFISAKPDNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA--P 127
+ A + + +++ I P +AA+ G LGGGLELA+ CH+RI
Sbjct: 74 IARAQSAQEAEDLARQGQQVMAE-IHSLPIPAIAAIHGACLGGGLELALACHSRICTDDA 132
Query: 128 KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 184
KT LGLPE+ LG++PG TQRLPRLVG+S A+EM+L K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALEMILTGKQLRARQALKAGLVDDVVPHS 192
Query: 185 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 242
LL+ A+++A + + R+L +++ G L A + + +KT N P +
Sbjct: 193 ILLEA----AVELALKGRQARRALPVRERVLAGPLGRALLFSMVGKKTEQKTKGNYPATK 248
Query: 243 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 302
L+VIE G+ G SG EAK F EL M S+ L +FFA K P +D P
Sbjct: 249 RILEVIETGLSQGSSSGYAAEAKAFGELAMTPQSQALRSIFFASTDVKKDPG-SDAEPAP 307
Query: 303 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 362
V G G TA + V +K++N + + ++ N+ V R +
Sbjct: 308 LKAVGVLGGGLMGGGIAFVTAS-KAKLPVRIKDINPKGINHALQYSWQNLDRKVKRRHIK 366
Query: 363 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 422
+ + + M+ G DY F D+VIEAV E + LKQ++ +++E+ C PH I A+NTS+
Sbjct: 367 ASERDKTVAMISGTTDYRGFAHRDLVIEAVFEDLALKQQMVADVEQHCAPHTIFASNTSS 426
Query: 423 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 482
+ + + K + +++IG HFFSP MPL+E++ TS Q + ++ + K+ K P+V
Sbjct: 427 LPIGDIAAKAARPEQVIGLHFFSPVEKMPLVEVIPHASTSPQTVSTVVKLAKMQGKTPIV 486
Query: 483 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAA 542
V + GF VNR PY A L+ G + +D A+ FG P+GP QLLD G
Sbjct: 487 VADKAGFYVNRILAPYINEAMRLLVEGEKIEHVDEALVKFGFPVGPIQLLDEVGIDTGTK 546
Query: 543 TSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTYE---KGSKPKPDPSVLPII 597
+ A+ +R F P +V +LK R G+ N +G Y Y + SK + DPSV +I
Sbjct: 547 IIPVLEAAYGER-FSPPANIVSAILKDDRKGRKNERGFYLYRAKGRKSKKQVDPSVYGLI 605
Query: 598 EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSF 657
P ++ + E + ++NE+ R E ++ A D D +V G+ F
Sbjct: 606 ----------PTTGQAKLSAVQCAERCVMMMLNEAARCFGEQVIKSARDGDIGAVFGIGF 655
Query: 658 PSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
P + GG + D +GA V L++ + YG F P L + A +G
Sbjct: 656 PPFLGGPFRYMDNLGAGEVVAILQRLATQYGPRFTPCDELLQMAERG 702
>gi|395235219|ref|ZP_10413434.1| multifunctional fatty acid oxidation complex subunit alpha
[Enterobacter sp. Ag1]
gi|394730115|gb|EJF30007.1| multifunctional fatty acid oxidation complex subunit alpha
[Enterobacter sp. Ag1]
Length = 721
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 236/701 (33%), Positives = 357/701 (50%), Gaps = 36/701 (5%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++T+ P +N L A + ++ V+ +V ++G F G DIN+
Sbjct: 14 DNVAVVTIDVPGEKMNTLKAEFGAQVHSIIKKLRDNPSVQGLVFISGKPDNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA--AP 127
A + + +++ I P+VAA+ G LGGGLE+A+ CH RI +P
Sbjct: 74 IGGCKTAAESQELARQGQQIMAE-IAALPIPVVAAIHGACLGGGLEMALACHVRICTDSP 132
Query: 128 KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 184
KT LGLPE+ LG++PG TQRLPRL+G+S A++M+L K + + KLGL+D VV
Sbjct: 133 KTLLGLPEVQLGLLPGSGGTQRLPRLIGVSNALDMILTGKQLRPRQALKLGLVDDVVPES 192
Query: 185 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 242
LL+ A+++A + + R L +++ G L + +++ +KT N P
Sbjct: 193 ILLEA----AVELALKGRKPSRELPVKERVLAGPLGRSLLFSMVSKKTEEKTQGNYPATG 248
Query: 243 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIG--L 300
+ VI G+ G SG EAK F EL M S L +FFA K + G
Sbjct: 249 RIIQVIRTGLEQGSKSGYEAEAKAFGELAMSPESAALRGLFFASTELKK-----EYGGEA 303
Query: 301 KPRGVRKVAVIGGGLMGSGIA-TAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRG 359
KP + V V+GGGLMG GIA + V +K++N+E + +K + V R
Sbjct: 304 KPGKLNSVGVLGGGLMGGGIAYVTATKGKLPVRIKDINNEGINHALKYSWDLLEKKVRRR 363
Query: 360 KLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATN 419
+ + L + G DY F D+V+EAV E + LKQK+ +E+E+ PH + A+N
Sbjct: 364 HMKPAERQRELARISGGTDYHGFSQRDIVVEAVFEDLALKQKMVAEVEQYAAPHTVFASN 423
Query: 420 TSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKV 479
TS++ + + + + ++IG HFFSP MPL+E++ TSA+ I + + K K
Sbjct: 424 TSSLPIADIAAQAARPQQVIGLHFFSPVDKMPLVEVIPHAGTSAETISTTVQLAKKQGKT 483
Query: 480 PVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGV 539
P+VVG+ GF VNR PY A ++ G + RID A+ FG P+GP QLLD G V
Sbjct: 484 PIVVGDSAGFYVNRILAPYVNEALRCLTEGEPIERIDDALVKFGFPVGPVQLLDEVGIDV 543
Query: 540 AAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYE---KGSKPKPDPSVLPI 596
+AF DR VD +LK R G+ NG+G Y Y + SK +PD ++ +
Sbjct: 544 GTKIIPILQQAFGDRFAAPDTVDAILKDDRKGRKNGRGFYLYPAKGRKSKKQPDTAIYTL 603
Query: 597 IEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMS 656
+ + P G+ T + I E + ++NE+ R L+EG+V A D D V G+
Sbjct: 604 L-------GVTPNGRQ---TPEHIAERCVMMMLNEAARCLDEGVVRSARDGDIGGVFGIG 653
Query: 657 FPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 697
FP + GG + D++GA V L++ + YG F P L
Sbjct: 654 FPPFLGGPFRYMDSLGAADVVAKLQRLASQYGERFSPCERL 694
>gi|120554072|ref|YP_958423.1| multifunctional fatty acid oxidation complex subunit alpha
[Marinobacter aquaeolei VT8]
gi|120323921|gb|ABM18236.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
[Marinobacter aquaeolei VT8]
Length = 715
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 214/682 (31%), Positives = 351/682 (51%), Gaps = 34/682 (4%)
Query: 41 EEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPD-VSVELVVNLIEDCKK 99
E S+ ++K +V+T + F G DI F ++ + L+ + + V N IED
Sbjct: 45 EALKSQKNLKGLVVTSSKDSFIVGADITEFTELFAGSEEDLVANNLKANEVFNAIEDLPF 104
Query: 100 PIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKA 156
P V A+ G+ALGGG E+ + R+ APK ++GLPE+ LG+ PG T RL RLVG+ A
Sbjct: 105 PTVTAINGIALGGGFEMCLATDYRVMAPKAKVGLPEVKLGIFPGFGGTVRLSRLVGVDNA 164
Query: 157 IEMMLLSKSITSEEGWKLGLIDAVVTSEEL-------LKVSRLWALDIAARRKPWIRSLH 209
+E + ++ K G +DAVV +++L +K LD ARR+ +
Sbjct: 165 VEWIAGGTENRADAALKTGAVDAVVGADKLVEAAVAIIKQCNEGKLDHMARREEKKGKI- 223
Query: 210 RTDKLGSLSEAREVLKLAR-LQAKKTAPNMPQHQACLDVIEEGIVHGGYS---GVLKEAK 265
KL ++ E+ ++++ A K N P A ++ I+ H G + + EAK
Sbjct: 224 ---KLNAM-ESMMAFEISKAFVAGKAGKNYP---APVEAIKTMQKHAGMTRDKAIEVEAK 276
Query: 266 VFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHI 325
F ++ + + LV +F +A K + + + V AV+G G+MG G+A
Sbjct: 277 GFAKMAKTNVAACLVGLFLNDQALKKKASAWE--KEASDVNLAAVLGAGIMGGGVAFQSA 334
Query: 326 LNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 385
L +++K++N + + G+ + + V +GK+ + + L + L+Y +FK+V
Sbjct: 335 LKGTPIIMKDINQDGIKLGLNEAKKLLSKRVAKGKMDAGQMGDVLNAITPTLNYGDFKNV 394
Query: 386 DMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFS 445
D+V+EAV+E+ +K + E E A IL +NTSTI +N++ + + G HFF+
Sbjct: 395 DLVVEAVVENPKVKDAVLRETEDAVREDTILTSNTSTISINLLAKNLKRPENFCGMHFFN 454
Query: 446 PAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLL 505
P H+MPL+E++R E+TS + I + K + K P+VV +C GF VNR FPY L
Sbjct: 455 PVHMMPLVEVIRGEKTSDRAIATTVAYAKAMGKTPIVVNDCPGFLVNRVLFPYFGGFAAL 514
Query: 506 VSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR---SFQSPLVD 562
V G D +ID + FG P+GP LLD+ G A ++ + FP+R F+S +D
Sbjct: 515 VRDGADFQKIDKVMEKFGWPMGPAYLLDVVGMDTAKHANEVMAEGFPERMKADFKSA-ID 573
Query: 563 LLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVE 622
++ ++ R G+ N KG Y YE+ K KP V E + + ++ G K E+EI+
Sbjct: 574 VMFENSRYGQKNDKGFYKYEEDKKGKPKKVVDE--ETYKLIEPVVDGSKDFD--EEEIIA 629
Query: 623 MILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKK 682
++ P+ E+ R LE+ IV +D D + G+ FP +RGG + + D +G + K
Sbjct: 630 RMMIPLCLETVRCLEDNIVEDPADADMGLIYGIGFPPFRGGALRYIDDMGVDKFVELADK 689
Query: 683 WSQLYGNFFKPSRFLEERATKG 704
++ L G + P+ L E A G
Sbjct: 690 YADL-GPLYAPTEKLREMAKTG 710
>gi|90408869|ref|ZP_01217009.1| fatty oxidation complex, alpha subunit [Psychromonas sp. CNPT3]
gi|90310032|gb|EAS38177.1| fatty oxidation complex, alpha subunit [Psychromonas sp. CNPT3]
Length = 722
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 215/727 (29%), Positives = 374/727 (51%), Gaps = 32/727 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTG-NGGRFSG 63
T+ + ++GVA + P +N L + L+ + +++K +V T G F
Sbjct: 4 TLTLTDNGVATLCFDMPDASINKLDSASLVELQTHLKNIKDDNNIKLLVFTSLKPGIFIA 63
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN + + + + +L+++ I P +A + G +GGG ELA+ C R
Sbjct: 64 GADINEIKSISSCEEAFKKAQMG-QLILHQISLLPFPSLAVINGACVGGGCELALACTYR 122
Query: 124 I--AAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ A + ++GLPE++LG+IPG RLP+L+GLS A+ ++L +K I +++ ++L LID
Sbjct: 123 LMSGAKQAKIGLPEVSLGIIPGFGGCVRLPKLIGLSNALTLILSAKLINAKKAYRLHLID 182
Query: 179 AVVTSEELLKVSRL---------WALDIAARR--KPWIRSLHRTDKLGSLSEAREVLKLA 227
AV +++ +V + +I +R K ++ L +++G R + K A
Sbjct: 183 AVYDAQQKNQVDDFIDNIICGHAFKKNILKKRIQKKNVQGLLDNNRIGQ----RLIFKKA 238
Query: 228 RLQA-KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQ 286
+ + +KT + P L IE+ + +L+E F + + S+ L+ ++F Q
Sbjct: 239 QQKLLQKTKGHYPAPLLALKTIEKTLHLSIDEALLEEVNAFASIASSEISKNLIQLYFTQ 298
Query: 287 RATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIK 346
A K V + P+ V ++ V+G G+MG GIA N I V LK+++ L KG +
Sbjct: 299 DALKKESGVNADDISPKDVAQLGVLGAGVMGGGIAWLCSQNGIDVRLKDIDWNALNKGYQ 358
Query: 347 TIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSEL 406
T + K+T + + + G + Y FK +D VIEAV+E + +K+ + E+
Sbjct: 359 TASGYYAQMQKHRKITPAQIRFKMNKISGAVKYHGFKQIDFVIEAVVEKIEIKKTVLREV 418
Query: 407 EKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVI 466
EK P H I+A+NTS++ + + + IG HFF+P + MPL+EI+ E++S + I
Sbjct: 419 EKELPEHAIIASNTSSLSITEMATALDRPENFIGMHFFNPVNRMPLVEIISGEKSSPETI 478
Query: 467 LDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPI 526
+ + K + K P+VV +C+GF +NR P A LL+ G V IDS I FGLP+
Sbjct: 479 ACAVKLAKAMHKTPIVVADCSGFLINRILIPMLNEAALLLQEGASVTEIDSIITEFGLPM 538
Query: 527 GPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRN-GKANGKGLYTY--EK 583
GPF L D G +A + ++ +R + +++ + K GK +G G Y + +K
Sbjct: 539 GPFTLADEVGIDIAFHVASMLQGSYGERMKVADILEHVYKEHHFLGKKSGLGFYLHSPKK 598
Query: 584 GSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVR 643
KP+ + ++ I+ R + + T++ I++ + +VNE+ R +EE +V
Sbjct: 599 AHKPRYNSNLDIILTYYRAQHHQFQH----AFTQQTILDRCMLIMVNEAARCIEENVVKN 654
Query: 644 ASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATK 703
AS LD +LG FP++RGGI+ +AD G + +L + + YGN F P+ L ++A +
Sbjct: 655 ASYLDMGIILGAGFPAFRGGILKYADNRGLTEICETLTELATKYGNRFTPAPLLLQKAQQ 714
Query: 704 GIPLSAP 710
+P
Sbjct: 715 NSLFYSP 721
>gi|157962419|ref|YP_001502453.1| multifunctional fatty acid oxidation complex subunit alpha
[Shewanella pealeana ATCC 700345]
gi|157847419|gb|ABV87918.1| fatty acid oxidation complex, alpha subunit FadJ [Shewanella
pealeana ATCC 700345]
Length = 706
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 237/710 (33%), Positives = 363/710 (51%), Gaps = 36/710 (5%)
Query: 12 NDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSGGFDIN 68
+DG+AI+T+ P +N L + + E + +K +VL +G F G DI+
Sbjct: 11 DDGIAILTMDVPGETMNTLRSEFGPEISEVLAEIKADASIKGLVLVSGKKDSFVAGADIS 70
Query: 69 VFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA-- 126
+ A D L+ +V N +E P+VAA+ G LGGGLELA+ CH R+ +
Sbjct: 71 MLDACETAADAKLLSQQG-HVVFNELESLTIPVVAAINGACLGGGLELALACHQRVCSLN 129
Query: 127 PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS 183
PKT +G+PE+ LG++PG TQRLPRLVG++ A++MML K + ++ K+GL+D V
Sbjct: 130 PKTMMGVPEVQLGLLPGGGGTQRLPRLVGVTTALDMMLTGKQLRPKQAVKMGLVDDAVPE 189
Query: 184 EELLKVSRLWALD----IAARRKPWIRSLHRTDKLGSLSEAREVL--KLARLQAKKTAPN 237
LL+ + AL +++P+I L L S R ++ + + AKKT N
Sbjct: 190 SILLRTAVEMALAGKRPAKKKKQPFINKL-----LEGTSAGRNIIFDQAGKQVAKKTQGN 244
Query: 238 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 297
P +D + +G+ G G+ EA F ELVM S L +FFA K D
Sbjct: 245 FPAPAKIIDCVCQGMTKGMVKGLEVEASHFAELVMSKESESLRSIFFATTEMKKETGAGD 304
Query: 298 IGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
+ KPR V+KV V+GGGLMG GIA+ I +K++N L + + V
Sbjct: 305 V--KPRTVKKVMVLGGGLMGGGIASVTTTKAKIPARVKDINETGLSNALSYAYKLLDKGV 362
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R +T +N + ++ +Y KD DMV+EAV E + LK ++ ++E+ C + I
Sbjct: 363 KRRHMTPAVRDNLMALMTTTTEYKGIKDADMVVEAVFEDLALKHQMVKDVERECGENTIF 422
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + E S + +IG H+FSP MPL+E++ +TSA+ I + K
Sbjct: 423 ASNTSSLPIGQIAEAASRPENVIGLHYFSPVEKMPLVEVIAHAKTSAETIATTVAFAKKQ 482
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR Y A L+ G V +D A+ FG P+GP LLD G
Sbjct: 483 GKTPIVVQDGAGFYVNRILALYMNEAAQLLLEGQSVEHLDKALVKFGFPVGPMTLLDEVG 542
Query: 537 YGVAAATSKEFDKAFPDRSFQSPLV-DLLLKSGRNGKANGKGLYTYEKGSKPKP-DPSVL 594
V A S + +R F++P D LL R G+ NGKG Y Y K K D +V
Sbjct: 543 IDVGAKISPILESELGER-FKAPAAFDKLLADDRKGRKNGKGFYLYGGKKKTKEVDQTVY 601
Query: 595 PIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLG 654
++ + PG + E+ + + ++NE+ R LEE I+ D D ++ G
Sbjct: 602 SVL-------GLKPG---VDTEASEVAQRCVVQMLNEAVRCLEEKIIACPRDGDIGAIFG 651
Query: 655 MSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+ FP + GG + D +GA+++ L+ + YGN F+P+ L++ A G
Sbjct: 652 IGFPPFLGGPFHYIDTLGADHLVKILEGYQARYGNRFEPADTLKQMAADG 701
>gi|223946607|gb|ACN27387.1| unknown [Zea mays]
Length = 269
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 149/272 (54%), Positives = 203/272 (74%), Gaps = 3/272 (1%)
Query: 450 MPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLG 509
MPLLEIVRT+ TS QV++DL+ VGK IKK P+VVGNCTGFAVNR FFPY+QSA V LG
Sbjct: 1 MPLLEIVRTQHTSPQVVVDLLDVGKKIKKTPIVVGNCTGFAVNRMFFPYTQSALFYVDLG 60
Query: 510 VDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGR 569
+DV++ID A FG+P+GPF+L DL G+GVA AT ++ + FP+R ++S L+ L+++ R
Sbjct: 61 MDVYKIDRACTKFGMPMGPFRLADLVGFGVAVATGMQYLENFPERVYKSMLLPLMMEGNR 120
Query: 570 NGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVV 629
G+A KG Y YE K PDP ++ IE+ R ++ + P + + ++EK+IVEM+ FPV+
Sbjct: 121 AGEATQKGFYKYEGKRKATPDPEIMKYIEKSRSMAGVTPDPELMKLSEKDIVEMVFFPVI 180
Query: 630 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 689
NE+CRVL+EGI V+ASDLD AS+ GM FP YRGG++ WAD++GA Y++ L++W++ YG
Sbjct: 181 NEACRVLDEGIAVKASDLDIASIFGMGFPPYRGGVMHWADSIGAKYIHGKLEEWTKRYGG 240
Query: 690 FFKPSRFLEERATKGIPLSAPVSSSSTSRARL 721
FFKP +L ERA KGIPLSAP + +ARL
Sbjct: 241 FFKPCSYLAERAAKGIPLSAP---TKKVQARL 269
>gi|334124992|ref|ZP_08498986.1| 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase /
3-hydroxybutyryl-CoA epimerase [Enterobacter hormaechei
ATCC 49162]
gi|333387562|gb|EGK58756.1| 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase /
3-hydroxybutyryl-CoA epimerase [Enterobacter hormaechei
ATCC 49162]
Length = 715
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 237/705 (33%), Positives = 356/705 (50%), Gaps = 31/705 (4%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA+IT+ P +N L ++ + + +V ++G F G DIN+
Sbjct: 14 DNVAVITIDVPDEKMNTLKAEFGVQVRAMLRQIRENKAICGLVFISGKPDNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA--P 127
+ A + + +++ I P+VAA+ G LGGGLELA+ CH+RI
Sbjct: 74 IARATSAQEAEDLARQGQQVMAE-IHALSIPVVAAIHGACLGGGLELALACHSRICTDDA 132
Query: 128 KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 184
KT LGLPE+ LG++PG TQRLPRLVG+S A+EM+L K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALEMILTGKQLRARQALKAGLVDEVVPHT 192
Query: 185 ELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 244
LL+ + AL ++P + G L A ++ + +KT N P
Sbjct: 193 ILLEAAVERALKGRQAKRPL--PVRERILAGPLGRALLFNRVGKKTGQKTKGNYPATTRI 250
Query: 245 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRG 304
L+VIE G+ G SG EAK F EL M S+ L +FFA K P +P
Sbjct: 251 LEVIETGLSQGSSSGYAAEAKAFGELAMTPQSQALRSIFFASTEVKKDPGSE---AEPAP 307
Query: 305 VRKVAVIGGGLMGSGIA-TAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQ 363
+R V V+GGGLMG GIA + V +K++N + + ++ N+ V R +
Sbjct: 308 LRAVGVLGGGLMGGGIAFVTASKGKLPVRIKDINPKGINHALQYSWQNLDRKVKRRHIKA 367
Query: 364 DKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI 423
+ + L M+ G DYS F D+VIEAV E + LKQ++ +++E+ C PH I A+NTS++
Sbjct: 368 SERDKTLAMITGTTDYSGFAHRDLVIEAVFEDLALKQQMVADVEQHCAPHTIFASNTSSL 427
Query: 424 DLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVV 483
+ + K + +++IG H+FSP MPL+E++ TS Q I ++ + K K P+VV
Sbjct: 428 PIGDIAAKAARPEQVIGLHYFSPVEKMPLVEVIPHATTSPQTIATVVKLAKKQGKTPIVV 487
Query: 484 GNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAAT 543
+ GF VNR PY A L++ G + +D A+ FG P+GP QLLD G
Sbjct: 488 ADKAGFYVNRILAPYINEAMRLLTEGEKIEHVDEALVKFGFPVGPIQLLDEVGIDTGTKI 547
Query: 544 SKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTYE---KGSKPKPDPSVLPIIE 598
+ A+ DR F P +V +LK R G+ N +G Y Y + SK + DPSV +I
Sbjct: 548 IPVLEAAYGDR-FAPPANVVSAILKDDRKGRKNERGFYLYAAKGRKSKKQIDPSVYALIP 606
Query: 599 ECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFP 658
+ GK +V E M++ +NE+ R E ++ A D D +V G+ FP
Sbjct: 607 -------VTGQGKLSAVQCAERCVMMM---LNEAARCFGEQVIKSARDGDIGAVFGIGFP 656
Query: 659 SYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATK 703
+ GG + D +GA V L++ + YG F P L + A +
Sbjct: 657 PFLGGPFRYMDTLGAGEVVAILQRLASQYGPRFTPCDELLQMAER 701
>gi|157144722|ref|YP_001452041.1| multifunctional fatty acid oxidation complex subunit alpha
[Citrobacter koseri ATCC BAA-895]
gi|166972667|sp|A8ADP2.1|FADJ_CITK8 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
dehydrogenase
gi|157081927|gb|ABV11605.1| hypothetical protein CKO_00449 [Citrobacter koseri ATCC BAA-895]
Length = 715
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 225/715 (31%), Positives = 362/715 (50%), Gaps = 37/715 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D VA++++ P +N L ++ ++ ++ +V ++ F
Sbjct: 8 TLNVRLDNVAVVSIDVPGEKMNTLKAEFATQVRAILKQIRENKALRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +++ I+ P+VAA+ G LGGGLE+A+ CH R
Sbjct: 68 GADINMIGNCKSAQEAETLARQGQQIMAE-IQALSVPVVAAIHGACLGGGLEMALACHRR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
I KT LGLPE+ LG++PG TQRLPRLVG+S A++M+L K + ++ ++GL+D
Sbjct: 127 ICTDDAKTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRPKQALRVGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + + R+L +++ G L +++ +KT
Sbjct: 187 EVVPHAILLEA----AVELAIKGRSAQRNLPVRERILAGPLGRTLLFRMVSKKTGQKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L+VIE G+ G SG EA+ F EL M S+ L ++FFA K P +
Sbjct: 243 NYPATERILEVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRNIFFASTEVKKDPG-S 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P V G G TA + V +K++N++ + +K + V
Sbjct: 302 DAQPGPLASVGVLGGGLMGGGIAYVTA-CKGGLSVRIKDINAKGINHALKYSWDQLETKV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R + + + L ++ G DY F D+VIEAV E + LKQ++ +E+E+ C PH I
Sbjct: 361 RRRHIKAGERDKQLALISGSTDYRGFSHRDLVIEAVFEDLALKQQMVAEVEQNCAPHTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + +++IG HFFSP MPL+E++ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHATTSAQTIATTVKLAKKQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A L++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVSDKAGFYVNRILAPYINEAIRLLTEGERVEAIDAALVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY---EKGSKPKPDP 591
+ A+ +R F +P +V +L R G+ NG+G Y Y + SK + DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVASILNDDRKGRKNGRGFYLYGVKGRKSKKQVDP 599
Query: 592 SVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 649
++ +I + RLS +++ E + ++NE+ R +E ++ A D D
Sbjct: 600 AIYRLIGTQGQSRLS------------AQQMAERCVMLMLNEAARCFDEKVIRSARDGDI 647
Query: 650 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D +GA V L++ + YG+ F P L A +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYMDTLGAGEVVAVLQRLATQYGDRFTPCERLLRMAERG 702
>gi|430002113|emb|CCF17893.1| Short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
[Rhizobium sp.]
Length = 688
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 225/673 (33%), Positives = 343/673 (50%), Gaps = 51/673 (7%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+D +A++ + NPPVNA + + L + EA + + +VL G G F G D+ F
Sbjct: 10 DDDIAVLIIDNPPVNAGSSDVRKALLARIAEAEADTTLVGVVLIGAGKSFIAGSDLREF- 68
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
++ L P + V+ IE KP VAA+ G ALGGG ELA+GC ARIAAP+T +
Sbjct: 69 ------NLPLEPP-QLPQVIEAIEGSSKPYVAALHGAALGGGYELALGCDARIAAPETVV 121
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT---SEE 185
GLPE TLG+IPG TQ+LPRLVG +KAI ++ ++S E LG+IDAV EE
Sbjct: 122 GLPECTLGIIPGAGGTQKLPRLVGKAKAISLICTGARVSSPEALLLGMIDAVADLDLCEE 181
Query: 186 LLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACL 245
+ ++R +A R++ R +L E E ++ A +A N QA +
Sbjct: 182 AVALAR----SLAGRKQ-------RVIELPVPEEKPEDIEAATSKALAAGRNRSHIQAAI 230
Query: 246 -DVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRG 304
V+ G V G G+ E F++L + ++ L H+FFA+R ++ G+K R
Sbjct: 231 RHVMAAGTV-GAREGLAAERAEFQQLRVASEAKALRHIFFAEREATR--GNLPAGVKGRR 287
Query: 305 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 364
++G G MG+ IATA + VL + N E L + I A + VT GKL+ D
Sbjct: 288 FESFGIVGAGTMGADIATATLQRGFPTVLVDSNKEALARAKARITAAIDKGVTSGKLSAD 347
Query: 365 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 424
+ A L + +D D++IEAV E + K+ +F++L+ P +LATNTS +D
Sbjct: 348 AGDRAKANLVLASELQSLEDCDVLIEAVFEDLETKRSVFAKLDTIARPCALLATNTSYLD 407
Query: 425 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 484
++ + T+ +IG HFFSPAH+M LLE+V +S + + + + K + K V
Sbjct: 408 IDGIAAATTRPKDVIGLHFFSPAHIMKLLEVVAGAESSHEAVATGLAIAKSLGKQAVQAS 467
Query: 485 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVA---- 540
N GF NR + Y + ++ G +D A++ FG +GPF + D++G +A
Sbjct: 468 NGFGFIGNRIYAAYRAACEFMLEDGALPHEVDEALKDFGFAMGPFAVADMSGLDIAWRMR 527
Query: 541 ---AATSKEFDK--AFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLP 595
AAT + A PDR L + R G+ G G Y Y+ +P+
Sbjct: 528 QQQAATRDPAARYVAIPDR---------LCEMERLGRKTGAGYYDYDDKGRPQRS----A 574
Query: 596 IIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGM 655
++E+ +++ G S+ +EI + +VNE+ VLEE I RASD+D V G
Sbjct: 575 VVEDVIVMASDAKGIARRSLDAREIQRRAMAAIVNEAGLVLEEEIAARASDIDVVLVNGY 634
Query: 656 SFPSYRGGIVFWA 668
FP + GG ++WA
Sbjct: 635 GFPRWLGGPLYWA 647
>gi|423121447|ref|ZP_17109131.1| fatty acid oxidation complex subunit alpha [Klebsiella oxytoca
10-5246]
gi|376394282|gb|EHT06933.1| fatty acid oxidation complex subunit alpha [Klebsiella oxytoca
10-5246]
Length = 714
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 223/713 (31%), Positives = 358/713 (50%), Gaps = 32/713 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+++ D VA+IT+ +P +N L ++ + ++ +VL + F
Sbjct: 8 TLDIRPDNVAVITIDSPGEKMNTLKAEFGQQVRAIVRQIRDNKTLRGVVLISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ + A + + +++ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIARCATAQEAEALARQGQQIMAE-IHGLAIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ + KT+LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + + + K GL+D
Sbjct: 127 VCSDDEKTRLGLPEVQLGLLPGSGGTQRLPRLIGVSGALEMILTGKQLRARQALKAGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVL--KLARLQAKKTAP 236
VV LL+ A+++A + +P RS+ +++ + R +L + + +KT
Sbjct: 187 EVVPQSILLQT----AVELALKGRPASRSMPIRERVLAGPLGRNLLFRLVGKKTRQKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L VIE G+ HG SG +EA+ F EL M S+ L +FFA K
Sbjct: 243 NYPAAERILQVIENGLAHGCSSGYAEEARAFGELAMTPQSQALRSIFFASTDLKK-DRGA 301
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 356
D P + G G TA + V +K++ + + +K + V
Sbjct: 302 DAQAGPLNRIGILGGGLMGGGIAYVTA-CKGGLPVRIKDIQARGINHALKYSWDLLDKQV 360
Query: 357 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 416
R L + + L ++ G DY F D+VIEAV E + LKQ++ +E+E C P I
Sbjct: 361 RRRYLRASERDRQLALISGTTDYQGFAHRDVVIEAVFEDLALKQRMVAEIEAHCSPQTIF 420
Query: 417 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 476
A+NTS++ + + + S ++IG HFFSP MPL+E++ + T Q I ++ + K+
Sbjct: 421 ASNTSSLPIGDIAAQASRPGQVIGLHFFSPVEKMPLVEVIPHQHTDPQTIATVVKLAKMQ 480
Query: 477 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 536
K P+VV + GF VNR PY A L+ G + ID ++ FG P+GP QLLD G
Sbjct: 481 GKTPIVVADKAGFYVNRILAPYINEAMRLLVEGEPLDHIDKSLVKFGFPVGPIQLLDEVG 540
Query: 537 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTYE---KGSKPKPDP 591
+ A+ +R F P ++D +L R G+ N +G Y YE + SK +PD
Sbjct: 541 IDTGTKILPVLEAAWGER-FSPPANIIDAILNDDRKGRKNSRGFYLYETKGRTSKKRPDA 599
Query: 592 SVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDAS 651
+V + L P + ++ ++I E + ++NE+ R +E ++ A D D +
Sbjct: 600 TVYSL------LGVSAPQAR---LSGQQIAERCVMMMLNEAARCFDEQVIRGARDGDIGA 650
Query: 652 VLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
V G+ FP + GG + D +GA V L++ + YG F P L A +G
Sbjct: 651 VFGIGFPPFLGGPFRYMDQLGAGEVVAILQRLAAQYGPRFTPCENLLRMAGQG 703
>gi|348510825|ref|XP_003442945.1| PREDICTED: trifunctional enzyme subunit alpha, mitochondrial-like
[Oreochromis niloticus]
Length = 763
Score = 328 bits (840), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 226/732 (30%), Positives = 371/732 (50%), Gaps = 44/732 (6%)
Query: 1 MAAPRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVK-AIVLTGN 57
+A V EV D VA++ + +P VN L+I + + + E D VK A++++
Sbjct: 36 LARTHVNYEVKGD-VAVVRINDPNSKVNTLSIQMQKEMTEVMNEVWENDAVKSAVLISSK 94
Query: 58 GGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELA 117
G F G DIN+ Q +V+ + ++ IE KPIVAA+ G LGGGLE A
Sbjct: 95 PGCFIAGADINMIQGCKTPEEVTKLSQEGQKMF-EQIEKSPKPIVAAINGSCLGGGLEFA 153
Query: 118 MGCHARIA--APKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGW 172
+ C R+A + KT LG PE+ LG++PG TQRLP++VGL A +MML ++I +E+
Sbjct: 154 IACQYRVATKSKKTVLGTPEVMLGLLPGAGGTQRLPKMVGLPSAFDMMLTGRNIQAEKAK 213
Query: 173 KLGLIDAVVT-------SEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREV-- 223
K+GL+D +V+ S E + L + I + + + + G++ + ++
Sbjct: 214 KMGLVDQLVSPLGPGLKSPEERTIEYLEEVAIECAKGIANKKISLRKEKGTMQKIQDYVM 273
Query: 224 -LKLARLQAKKTAPNMPQHQA---------CLDVIEEGIVHGGYSGVLKEAKVFKELVML 273
R Q KT Q+ ++ ++ G+ G +G L E++ F +L
Sbjct: 274 SFPFVRNQIYKTVHGKVMKQSKGLYPAPLKIIECVKTGVEQGPVAGYLAESQNFGQLAKT 333
Query: 274 DTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVL 333
S L+ ++ Q A K G R V+ +A++G GLMG+GIA + ++ +L
Sbjct: 334 SESAALIGLYHGQVACKK----NRFGTPEREVKTLAILGAGLMGAGIAQVSVDKGVHTIL 389
Query: 334 KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVI 393
K+ E L +G + + + + ++T + ++ L G L+Y F+ DMVIEAV
Sbjct: 390 KDTTVEGLARGEQQVYKGLNDKTKKKRITSFERDSIQSNLTGQLEYKGFEKADMVIEAVF 449
Query: 394 ESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLL 453
E + +K K+ E+E PPHCI A+NTS + + + + +++IG H+FSP M LL
Sbjct: 450 EDINIKHKVVKEVEAVIPPHCIFASNTSALPIKDIAAASKRPEKVIGMHYFSPVDKMQLL 509
Query: 454 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVF 513
EI+ T++TS + VG KV +VVG+ GF R P A L+ GVD
Sbjct: 510 EIITTDKTSKDTTASAVAVGLKQGKVIIVVGDGPGFYTTRCLAPMLAEAVRLLQEGVDPK 569
Query: 514 RIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLL---LKSGRN 570
++D+ FG P+G L D G V A +++ KAF R F V++L + G
Sbjct: 570 KLDALTTDFGFPVGLATLADEVGIDVGAHVAEDLGKAFGSR-FGGGNVEVLKTMVDLGFK 628
Query: 571 GKANGKGLYTYEKGSKPKP-DPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVV 629
G+ +GKG Y Y+ G+K + +P + I+E+ + N P ++ E+ ++ V
Sbjct: 629 GRKSGKGCYVYQPGTKVRDVNPDIGDILEKYKLTPN------PSVSSDSEVQYRLVSRFV 682
Query: 630 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 689
NE+ L+EGI+ + D +V G+ FP Y GG + D+ GA+ + ++++ +YGN
Sbjct: 683 NEAVMCLQEGILNNPLEGDIGAVFGLGFPPYLGGPFRFVDSFGADKLVNKMRQYEAIYGN 742
Query: 690 FFKPSRFLEERA 701
F P + L + A
Sbjct: 743 QFTPCQLLLDHA 754
>gi|334312856|ref|XP_001380198.2| PREDICTED: trifunctional enzyme subunit alpha, mitochondrial
[Monodelphis domestica]
Length = 763
Score = 328 bits (840), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 227/718 (31%), Positives = 360/718 (50%), Gaps = 41/718 (5%)
Query: 15 VAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVK-AIVLTGNGGRFSGGFDINVFQ 71
VA++ L +P VN L + + E + D VK A++++ G F G DIN+
Sbjct: 49 VAVVRLNSPNSKVNTLNKELTSDFVKVMNEIWTSDTVKSAVIISSKPGCFIAGADINMIA 108
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP--KT 129
A +V+ + +++ L E KPIVAA+ G LGGGLELA+ C RIA KT
Sbjct: 109 ACKTAQEVTQLSREGQQMLEKL-EKSPKPIVAAISGSCLGGGLELAIACQYRIATKDKKT 167
Query: 130 QLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVV----- 181
LG PE+ LG++PG TQRLP++VG+ A +MML ++I ++ ++GL+D +V
Sbjct: 168 VLGTPEVLLGILPGAGGTQRLPKMVGIPAAFDMMLTGRNIRADRAKRMGLVDQLVDPLGP 227
Query: 182 --------TSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEA-----REVLKLAR 228
T E L +++ ++A +A ++ + D + + +++ K
Sbjct: 228 GLKLPEDRTVEYLEEIAIIFAKGLADKKISGKKEKGLIDMVTTYVMTIPFVRQQIYKKVE 287
Query: 229 LQAKKTAPNM-PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQR 287
+ +K + P +DV++ GI HG +G L E++ F EL M S+ LV ++ Q
Sbjct: 288 EKVQKQTKGLYPAPLKIIDVVKTGIEHGNEAGYLSESQKFGELAMTKESKALVGLYHGQV 347
Query: 288 ATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKT 347
K G + V ++ V+G GLMG+GIA + I +LK+ + L +G +
Sbjct: 348 LCKK----NKFGTPQKAVMQICVLGAGLMGAGIAQVSVDKGIKTILKDTSIAGLGRGQQQ 403
Query: 348 IEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELE 407
I + V + +T + ++ + G LDY F+ DMVIEAV E + LK + E+E
Sbjct: 404 IFKGLDDKVKKKAITSFERDSIYSNMTGQLDYQGFEKADMVIEAVFEDIQLKHAVLKEVE 463
Query: 408 KACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVIL 467
P HCI A+NTS + + + + +++IG H+FSP M LLEI+ TE+TS I
Sbjct: 464 SVVPSHCIFASNTSALPIGEIASVSKRPEKVIGMHYFSPVDKMQLLEIITTEKTSKDTIA 523
Query: 468 DLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIG 527
++VG KV +VV + GF R P ++ GV+ ++DS + G P+G
Sbjct: 524 SAVSVGLKQGKVIIVVKDGPGFYTTRCLTPMMSEVIRILQEGVEPKKLDSLTTNMGFPVG 583
Query: 528 PFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLL---LKSGRNGKANGKGLYTYEKG 584
L+D G VA S KAF +R F ++LL + G G+ +GKG Y Y++G
Sbjct: 584 AATLVDEVGVDVALHVSTALTKAFGER-FGGGNIELLRQMVNRGFLGRKSGKGFYIYQEG 642
Query: 585 SKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRA 644
K + S + I LSN+ T +EI +L VNE+ L+EGI+
Sbjct: 643 VKSRSLNSAMNEI-----LSNMKVSAPAEVCTPEEIQYRVLTRFVNEAVMCLQEGILASP 697
Query: 645 SDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERAT 702
+ D +V G+ FP GG ++D GA+ + +KK+ +YG F P + L + A
Sbjct: 698 EEGDIGAVFGLGFPPCLGGPFRFSDLYGAHKLVDRMKKYEAVYGKQFTPCQLLIDHAN 755
>gi|387814548|ref|YP_005430034.1| Fatty acid oxidation complex subunit alpha [Marinobacter
hydrocarbonoclasticus ATCC 49840]
gi|302608168|emb|CBW44433.1| Fatty oxidation complex subunit alpha [Marinobacter
hydrocarbonoclasticus ATCC 49840]
gi|381339564|emb|CCG95611.1| Fatty acid oxidation complex subunit alpha [Marinobacter
hydrocarbonoclasticus ATCC 49840]
Length = 715
Score = 328 bits (840), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 214/682 (31%), Positives = 350/682 (51%), Gaps = 34/682 (4%)
Query: 41 EEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPD-VSVELVVNLIEDCKK 99
E S+ ++K +V+T + F G DI F ++ + L+ + + V N IED
Sbjct: 45 EALKSQKNLKGLVVTSSKDSFIVGADITEFTELFAGSEEDLVANNLRANEVFNAIEDLPF 104
Query: 100 PIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKA 156
P V A+ G+ALGGG E+ + R+ APK ++GLPE+ LG+ PG T RL RLVG+ A
Sbjct: 105 PTVTAINGIALGGGFEMCLATDYRVMAPKAKVGLPEVKLGIFPGFGGTVRLSRLVGVDNA 164
Query: 157 IEMMLLSKSITSEEGWKLGLIDAVVTSEEL-------LKVSRLWALDIAARRKPWIRSLH 209
+E + ++ K G +DAVV +++L +K LD ARR+ +
Sbjct: 165 VEWIAGGTENRADAALKTGAVDAVVGADKLVEAAVAIIKQCNEGKLDHMARREEKKGKI- 223
Query: 210 RTDKLGSLSEAREVLKLAR-LQAKKTAPNMPQHQACLDVIEEGIVHGGYS---GVLKEAK 265
KL ++ E+ ++++ A K N P A ++ I+ H G + + EAK
Sbjct: 224 ---KLNAM-ESMMAFEISKAFVAGKAGKNYP---APVEAIKTMQKHAGMTRDKAIEVEAK 276
Query: 266 VFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHI 325
F ++ + + LV +F +A K + + + V AV+G G+MG G+A
Sbjct: 277 GFAKMAKTNVAACLVGLFLNDQALKKKASAWE--KEASDVNLAAVLGAGIMGGGVAFQSA 334
Query: 326 LNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 385
L +++K++N + + G+ + + V +GK+ + + L + L+Y +FK+V
Sbjct: 335 LKGTPIIMKDINQDGIKLGLNEAKKLLSKRVAKGKMDAGQMGDVLNAITPTLNYGDFKNV 394
Query: 386 DMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFS 445
D+V+EAV+E+ +K + E E A IL +NTSTI +N++ + + G HFF+
Sbjct: 395 DLVVEAVVENPKVKDAVLRETEDAVREDTILTSNTSTISINLLAKNLKRPENFCGMHFFN 454
Query: 446 PAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLL 505
P H+MPL+E++R E+TS + I + K + K P+VV +C GF VNR FPY L
Sbjct: 455 PVHMMPLVEVIRGEKTSDRAIATTVAYAKAMGKTPIVVNDCPGFLVNRVLFPYFGGFAAL 514
Query: 506 VSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR---SFQSPLVD 562
V G D +ID + FG P+GP LLD+ G A ++ FP+R F+S +D
Sbjct: 515 VRDGADFQKIDKVMEKFGWPMGPAYLLDVVGMDTAKHANEVMADGFPERMKADFKSA-ID 573
Query: 563 LLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVE 622
++ ++ R G+ N KG Y YE+ K KP V E + + ++ G K E+EI+
Sbjct: 574 VMFENNRYGQKNDKGFYKYEEDKKGKPKKVVDE--ETYKLIEPVVDGSKDFD--EEEIIA 629
Query: 623 MILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKK 682
++ P+ E+ R LE+ IV +D D + G+ FP +RGG + + D +G + K
Sbjct: 630 RMMIPLCLETVRCLEDNIVEDPADADMGLIYGIGFPPFRGGALRYIDDMGVDKFVELADK 689
Query: 683 WSQLYGNFFKPSRFLEERATKG 704
++ L G + P+ L E A G
Sbjct: 690 YADL-GPLYAPTEKLREMAKTG 710
>gi|449663039|ref|XP_002158828.2| PREDICTED: trifunctional enzyme subunit alpha, mitochondrial-like
[Hydra magnipapillata]
Length = 767
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 240/727 (33%), Positives = 376/727 (51%), Gaps = 56/727 (7%)
Query: 13 DGVAIITL--INPPVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSGGFDINV 69
D VA++T+ N VN L+ ++ F+E T +V ++VL +G F G DIN+
Sbjct: 49 DNVAVVTINDKNSKVNVLSQNVIEETVQVFKEVTHNPNVSSVVLISGKPDCFIAGADINM 108
Query: 70 FQKVHGAGDVSLMPDVSVE--LVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA-- 125
++ A + +SVE ++N+I D KKP+VAA+ G LGGGLE+A+ CH RIA
Sbjct: 109 ---LNTANSLEKGTAISVEGQKIMNMIFDSKKPVVAAINGSCLGGGLEVALACHYRIAVD 165
Query: 126 APKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVV- 181
+PKT LG+PE+ LG++PG TQRLPRLVGL +++MML K++ + + KLGL+ +VV
Sbjct: 166 SPKTGLGVPEVMLGLLPGAGGTQRLPRLVGLPTSLDMMLTGKTVNATKAKKLGLVHSVVD 225
Query: 182 ------------TSEELLKVSRLWALDIAA------RRKPW--IRSLHRTDKLGSLSEAR 221
T L +V+ A D+A+ + KPW + L L S R
Sbjct: 226 QLGPGVSDSKANTMRLLEEVAVKAAKDLASGKLQVSQSKPWFSLAGLQHNIPL-SFGPLR 284
Query: 222 E-VLKLARLQA-KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGL 279
+ V K A+ KKT P L + G+ +G +E++ F EL ++ L
Sbjct: 285 DYVFKKAKETVMKKTLGLYPAPLKILKATQTGLEKNIEAGFKEESQGFGELTQSKEAKSL 344
Query: 280 VHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIY-VVLKEVNS 338
+ +F Q K G V+ VAV+G GLMG+GIA I + V+LK+ +
Sbjct: 345 MGLFNGQTECKK----NRFGAPKHKVQHVAVLGAGLMGAGIAEVSINKAHHNVILKDTTT 400
Query: 339 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 398
+ L +GI I N+ ++ ++T + + + L+ LDYS F + DMVIEAV E + +
Sbjct: 401 DGLSRGIDQIYKNINLRASKRQITTFERDVIMSKLQTQLDYSNFSEADMVIEAVFEDIKV 460
Query: 399 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 458
K K+ E+EK P HC+ A+NTS I + + + + +IG H+FSP MPLLEI+ T
Sbjct: 461 KHKVLQEVEKVIPEHCVFASNTSAIPIAEIASVSKRPENVIGMHYFSPVDKMPLLEIITT 520
Query: 459 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 518
E+TS + I + VG K +VV + GF R P A L+S G++ +D
Sbjct: 521 EKTSKETIASAVDVGLKQGKTVIVVKDGPGFYTTRILMPTLMEALQLLSEGINPRDLDQR 580
Query: 519 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSF--QSPLVDLLLKSGRNGKANGK 576
++FG P+G L+D G VAA + F R +++ ++ G G+ + K
Sbjct: 581 SKNFGFPVGCVTLVDEVGIDVAAHIANHLGNIFKGRMVGGNIQMLNDMVDRGFLGRKSKK 640
Query: 577 GLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPIS-VTEKEIVEMILFPVVNESCRV 635
G Y Y +K + + L II++ ++ P++ +T+ E ++ + NE+
Sbjct: 641 GFYKY--ANKKEVNEGALEIIKKYQK--------TPVTGLTDDETALRLVSRMTNEAVLC 690
Query: 636 LEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYG-NFFKPS 694
LEEGI+ D D +V G+ FP GG + D GA + ++K+ +L G + FKP+
Sbjct: 691 LEEGILNSPVDGDIGAVFGLGFPPPHGGPFRFVDTYGAGNLVKLMEKYQKLIGESQFKPA 750
Query: 695 RFLEERA 701
+ L + A
Sbjct: 751 QLLLDHA 757
>gi|291387083|ref|XP_002709860.1| PREDICTED: mitochondrial trifunctional protein, alpha subunit
[Oryctolagus cuniculus]
Length = 763
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 230/729 (31%), Positives = 364/729 (49%), Gaps = 42/729 (5%)
Query: 5 RVTMEVGNDGVAIITLINPP---VNALAIPIVAGLKDKFEEATSRDDVK-AIVLTGNGGR 60
R + G G + IN P VN L + + + E + D ++ A++++ G
Sbjct: 38 RTHVNYGVKGDVAVIRINSPNSKVNTLNKELQSEFIEVMNEIWASDQIRSAVLISSKPGC 97
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
F G DIN+ + + + ++ L E KPIVAA+ G LGGGLELA+ C
Sbjct: 98 FVAGADINMLAACKTPQEAAQVSQEGQKMFEKL-EKSTKPIVAAISGSCLGGGLELAISC 156
Query: 121 HARIAAP--KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLG 175
RIA KT LG+PE+ LG++PG TQRLP++VG+ A +MML +SI ++ K+G
Sbjct: 157 QYRIAIKDRKTVLGVPEVLLGILPGAGGTQRLPKMVGVPAAFDMMLTGRSIRADRAKKMG 216
Query: 176 LIDAVV-------------TSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEA-- 220
L+D +V T E L +V+ +A +A ++ R+ +KL S +
Sbjct: 217 LVDQLVEPLGPGLKPPEERTIEYLEEVAVSFAKGLADKKISSKRNKGLMEKLTSYAMTIP 276
Query: 221 ---REVLKLARLQAKKTAPNM-PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 276
+++ K Q +K + P +DV++ GI G +G L E++ F EL M S
Sbjct: 277 FVRQQIYKKVEEQVQKQTKGLYPAPLKIIDVVKTGIEQGNDAGYLAESQKFGELAMTKES 336
Query: 277 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 336
+ L+ ++ Q K G + V+++A++G GLMG+GIA + + +LK+
Sbjct: 337 KALMGLYHGQVLCKK----NKFGAPQKEVKQLAILGAGLMGAGIAQVSVDKGLNTILKDA 392
Query: 337 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 396
L +G + + + V + LT + ++ L G LDY F+ DMVIEAV E +
Sbjct: 393 TLAGLGRGQQQVFKGLNDKVKKKALTSFERDSIFSNLTGQLDYQNFEKADMVIEAVFEDL 452
Query: 397 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 456
LK K+ E+E P HC+ A+NTS + +N + + +++IG H+FSP M LLEI+
Sbjct: 453 SLKHKVLKEVEAVIPDHCVFASNTSALPINEIAAVSKRPEKVIGMHYFSPVDKMQLLEII 512
Query: 457 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 516
T++TS + VG KV VVV + GF R P ++ GV ++D
Sbjct: 513 TTQKTSKDTTASAVAVGLKQGKVIVVVKDGPGFYTTRCLAPMMSEVIRILQEGVGPKKLD 572
Query: 517 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLK---SGRNGKA 573
S SFG P+G L D G VA +++ KAF +R F ++LL + G G+
Sbjct: 573 SLTTSFGFPVGAATLADEVGVDVAKHVAEDLGKAFGER-FGGGSLELLQQMVAKGFLGRK 631
Query: 574 NGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESC 633
+GKG Y Y++GSK K S + I L+ + +P ++++I ++ VNE+
Sbjct: 632 SGKGFYIYQEGSKDKNLNSDMDSI-----LAGLKLPARPEVSSDEDIQYRLVTRFVNEAV 686
Query: 634 RVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKP 693
L+EGI+ ++ D +V G+ FP GG + D GA V L+K+ YG F P
Sbjct: 687 MCLQEGILATPAEGDIGAVFGLGFPPCLGGPFRFVDLYGAQKVVDRLRKYEAAYGKQFTP 746
Query: 694 SRFLEERAT 702
+ L + A
Sbjct: 747 CQLLIDHAN 755
>gi|167823745|ref|ZP_02455216.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
dehydrogenase domain protein [Burkholderia pseudomallei
9]
Length = 561
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 201/544 (36%), Positives = 293/544 (53%), Gaps = 11/544 (2%)
Query: 143 GTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRK 202
GTQRLPR VGL A+ M++ + SE+ K GL DA V + LL+ + +A A
Sbjct: 3 GTQRLPRAVGLETALNMIVSGAPVPSEQLAKSGLFDAFVEGD-LLEAAVAFARKAGAASG 61
Query: 203 PWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLK 262
P R D+ A ++ AR K A + P C+D IE G++ G G+
Sbjct: 62 PHPRV---RDREIVHENAAGFIQFARNSVKAVAQHYPAPHKCIDAIEAGVLQGFDKGLAF 118
Query: 263 EAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIA 321
E F LV SR L H FF +RA K+ +V D + RG+ VAVIG G MG GI
Sbjct: 119 ERDCFVALVQTPESRALRHAFFGERAAGKIADVPADTAV--RGIESVAVIGAGTMGGGIT 176
Query: 322 TAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE 381
+ + V L E E L +G+ TI N V++GKLTQ+K + + +L+ L Y +
Sbjct: 177 MNFLNAGLPVTLLETKQEALERGLATIRKNYDAQVSKGKLTQEKLDARMALLRPTLSYDD 236
Query: 382 FKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGA 441
KD D+VIEAV E + +K+++F L++ P ILA+NTST+D+N + T ++G
Sbjct: 237 LKDADLVIEAVFEELGVKEQVFKRLDEVAKPGAILASNTSTLDVNKIAAFTRRPQDVVGL 296
Query: 442 HFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQS 501
HFFSPA+VM LLE+VR E T+ V+ +M + K I+K VV G C GF NR Y +
Sbjct: 297 HFFSPANVMKLLEVVRGEHTAKDVLATVMQLAKKIRKTAVVSGVCDGFIGNRMVEQYIRQ 356
Query: 502 ARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLV 561
A ++ G +ID AI +FG +GPF++ DLAG + A K PD + S +
Sbjct: 357 ALFMLEEGALPAQIDRAIEAFGFAMGPFRMSDLAGNDIGWAIRKRRYVEQPDLHY-SKIA 415
Query: 562 DLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIV 621
D L + GR G+ G G Y Y G + + PS L ++E + G + + EIV
Sbjct: 416 DRLCEQGRFGQKTGAGWYDYVPGER-RAKPSKL--VDEMIVAYSSERGVARRQIGDAEIV 472
Query: 622 EMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLK 681
E +++ +VNE ++LEE I +ASD+D + G FP +RGG + +AD VG V +++
Sbjct: 473 ERLVYALVNEGAKILEEKIASKASDIDMVYLTGYGFPLWRGGPMLYADTVGLYNVERAMR 532
Query: 682 KWSQ 685
++Q
Sbjct: 533 GYAQ 536
>gi|149728089|ref|XP_001502833.1| PREDICTED: trifunctional enzyme subunit alpha, mitochondrial [Equus
caballus]
Length = 762
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 228/729 (31%), Positives = 364/729 (49%), Gaps = 42/729 (5%)
Query: 5 RVTMEVGNDGVAIITLINPP---VNALAIPIVAGLKDKFEEATSRDDVK-AIVLTGNGGR 60
R + G G + IN P VN L + + + E + D ++ A++++ G
Sbjct: 37 RTHINYGVKGDVAVVRINSPNSKVNTLNKELQSEFVEVMNEIWASDQIRSAVLISSKPGC 96
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
F G DIN+ +V+ + + + +E KPIVAA+ G LGGGLELA+ C
Sbjct: 97 FIAGADINMLAACKTNQEVTQISQEG-QRIFEKLEKSPKPIVAAISGSCLGGGLELAISC 155
Query: 121 HARIAAP--KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLG 175
RIA KT LG PE+ LG++PG TQRLP++VG+ A +MML ++I ++ K+G
Sbjct: 156 QYRIATKDKKTVLGSPEVLLGILPGAGGTQRLPKMVGVPAAFDMMLTGRNIHADRAKKMG 215
Query: 176 LIDAVV-------------TSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEA-- 220
L+D +V T E L +V+ +A +A ++ R DKL S++
Sbjct: 216 LVDQLVEPLGPGLKPPEERTIEYLEEVAVTFAKGLADKKISPKRDKGLVDKLTSVAMGIP 275
Query: 221 ---REVLKLARLQAKKTAPNM-PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 276
+++ K + +K + P +DV++ GI G +G L E++ F EL M S
Sbjct: 276 FVRQQIYKKVEEKVRKQTKGLYPAPLKIIDVVKTGIEQGSDAGYLSESQKFGELAMTKES 335
Query: 277 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 336
+ L+ ++ Q K G + V+ +A++G GLMG+GIA + + +LK+
Sbjct: 336 KALIGLYHGQVLCKK----NKFGAPQKEVKHLAILGAGLMGAGIAQVSVDKGLKTILKDA 391
Query: 337 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 396
L +G + + + V + LT + ++ L G LDY F+ DMVIEAV E +
Sbjct: 392 TLAGLGRGQQQVFKGLNDKVKKKALTSFERDSIFSNLTGQLDYQGFEKADMVIEAVFEDL 451
Query: 397 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 456
LK ++ E+E P HC+ A+NTS + +N + + +++IG H+FSP M LLEI+
Sbjct: 452 SLKHRVLKEVEAVIPDHCVFASNTSALPINEISAVSKRPEKVIGMHYFSPVDKMQLLEII 511
Query: 457 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 516
TE+TS + VG KV +VV + GF R P ++ GVD ++D
Sbjct: 512 TTEKTSKDTTASAVAVGLKQGKVIIVVKDGPGFYTTRCLAPMMSEVIRILQEGVDPKKLD 571
Query: 517 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLL---LKSGRNGKA 573
S SFG P+G L+D G VA +++ KAF +R F +DLL + G G+
Sbjct: 572 SLTTSFGFPVGAATLVDEVGVDVARHVAEDLGKAFGER-FGGGSLDLLKQMVSKGFLGRK 630
Query: 574 NGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESC 633
+GKG Y Y++G K K S + I L+++ K ++++I ++ VNE+
Sbjct: 631 SGKGFYIYQEGVKSKNLNSDMDSI-----LASLKIPPKSEVSSDEDIQYRLVTRFVNEAV 685
Query: 634 RVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKP 693
L+EGI+ ++ D +V G+ FP GG + D GA + L+K+ YG F P
Sbjct: 686 MCLQEGILATPAEGDIGAVFGLGFPPCLGGPFRFVDLYGAQKIVDRLRKYEAAYGKQFTP 745
Query: 694 SRFLEERAT 702
+ L + A
Sbjct: 746 CQLLVDHAN 754
>gi|423125062|ref|ZP_17112741.1| fatty acid oxidation complex subunit alpha [Klebsiella oxytoca
10-5250]
gi|376400507|gb|EHT13120.1| fatty acid oxidation complex subunit alpha [Klebsiella oxytoca
10-5250]
Length = 714
Score = 327 bits (838), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 223/716 (31%), Positives = 356/716 (49%), Gaps = 38/716 (5%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVK-AIVLTGNGGRFSG 63
T+EV D +A+IT+ P +N L + ++ + +++ A+ ++ F
Sbjct: 8 TLEVRPDNIAVITIDAPGEKMNTLKAEFASEVRGIIRQIRDNKELRGAVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ + H A + + +++ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIARCHSAQEAEALARQGQQIMAE-IHGLPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAAP--KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ + KT+LGLPE+ LG++PG TQRLPRL+G+S A+EM+L K + + K GL+D
Sbjct: 127 VCSDDDKTRLGLPEVQLGLLPGSGGTQRLPRLIGVSGALEMILTGKQLRPRQALKAGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A+++A + +P R++ +++ G L + +A+ KT
Sbjct: 187 EVVPQTILLRT----AVELALKGRPASRAVPARERILAGPLGRSLLFRLVAKKTHHKTQG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P + L V+E G+ G SG +EA+ F EL M S+ L +FFA K
Sbjct: 243 NYPATERILQVMETGLAQGCSSGYAEEARAFGELAMTPQSQALRSIFFASTDLKK----- 297
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHIL---NNIYVVLKEVNSEYLLKGIKTIEANVR 353
D G V +V G G A++ + V +K++ + +K +
Sbjct: 298 DRGADAEPVALRSVGILGGGLMGGGIAYVTACKGGLPVRIKDIQPRGINHALKYSWDLLD 357
Query: 354 GLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPH 413
V R L + + + ++ G LDY F D+VIEAV E + LKQK+ E+ + C P
Sbjct: 358 IQVRRRYLRASERDRQMGLISGSLDYQGFAHRDVVIEAVFEDLALKQKMVGEVGQHCRPE 417
Query: 414 CILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVG 473
I A+NTS++ + + S R+IG HFFSP MPL+E++ T Q I + +
Sbjct: 418 TIFASNTSSLPIGEIAAHASRPQRVIGLHFFSPVDKMPLVEVIPHSGTDRQTIATAVKLA 477
Query: 474 KIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLD 533
K+ K P+VV + GF VNR PY A L+ G + ID+A+ FG P+GP QLLD
Sbjct: 478 KLQGKTPIVVADKAGFYVNRILAPYINEAMRLLMEGEPIEHIDNALVKFGFPVGPIQLLD 537
Query: 534 LAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTYE---KGSKPK 588
G + A+ +R F P ++ +L R G+ N +G Y Y + SK +
Sbjct: 538 EVGIDTGTKIIPVLEAAWGER-FSPPANIISSILNDDRKGRKNNRGFYLYAAKGRKSKKR 596
Query: 589 PDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLD 648
PDP++ + L P + ++ +++ E + ++NE+ R +E +V A D D
Sbjct: 597 PDPAIYAL------LGISSPQAR---LSAQQVAERCVMMMLNEAARCFDERVVRSARDGD 647
Query: 649 DASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D +GA V L++ + YG F P L A +G
Sbjct: 648 IGAVFGIGFPPFLGGPFRYMDTLGAGEVAAILQRLAAQYGPRFTPCDTLLHMAEQG 703
>gi|261346522|ref|ZP_05974166.1| fatty oxidation complex, alpha subunit FadB [Providencia
rustigianii DSM 4541]
gi|282565226|gb|EFB70761.1| fatty oxidation complex, alpha subunit FadB [Providencia
rustigianii DSM 4541]
Length = 730
Score = 327 bits (838), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 223/702 (31%), Positives = 350/702 (49%), Gaps = 38/702 (5%)
Query: 24 PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMP 83
P+N L VA L + + D++ ++L + F G DI F + A +L
Sbjct: 27 PINKLDTHTVASLDEAVTVLERQSDLQGVILRSDKPAFIVGADIKEFLSLFEASKETLSE 86
Query: 84 DVS-VELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIP 142
+S + N +ED P ++A+ G ALGGG E + RIA+P ++GLPE LG++P
Sbjct: 87 WLSYANHIFNRLEDLPVPTISAINGYALGGGCECILATDFRIASPDARIGLPETKLGIMP 146
Query: 143 G---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL-------LKVSRL 192
G + RLPRL+GL A+E++ K ++ + KLGL+DAVV +E+L ++ +
Sbjct: 147 GFGGSVRLPRLIGLDSALEIITAGKDVSGTQALKLGLVDAVVETEKLPQAALQIIEQAIA 206
Query: 193 WALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGI 252
A++ +R+P + +L KL + + + + + P ++ IE+
Sbjct: 207 GAINWKQKRQPKLETL----KLSPIEQTMSFSVAKGMVYQVAGKHYPAPMTAVNTIEKAA 262
Query: 253 VHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQ---RATSKVPNVTDIGLKPRGVRKVA 309
+ E F L D +R LV VF +ATSK I K + A
Sbjct: 263 NCTREEALKHETAAFVPLAHSDVARALVSVFLNDQQVKATSK-----KIAGKVTAPTQAA 317
Query: 310 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 369
V+G G+MG GIA I V++K++N + L GI + + G RGK+T D+
Sbjct: 318 VLGAGIMGGGIAYQSASKGIAVLMKDINEKSLDLGINEAKKLLNGQFERGKITADRMATT 377
Query: 370 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 429
L + L YS ++V +++EAV+E+ +K + SE+E +LA+NTSTI + +
Sbjct: 378 LASIHPSLSYSGIENVQIIVEAVVENPKIKAAVLSEVESLITSETLLASNTSTIPITELA 437
Query: 430 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 489
+ G HFF+P H MPL+EI+R E+TS + I +++ + K P+VV +C GF
Sbjct: 438 NSLKRPENFCGMHFFNPVHRMPLVEIIRGEKTSEETIAKVVSFANKMGKTPIVVNDCPGF 497
Query: 490 AVNRAFFPYSQSARLLVSLGVDVFRIDSAI-RSFGLPIGPFQLLDLAGYGVAAATSKEFD 548
VNR FPY LL+ G D ID + + FG P+GP LLD+ G A +
Sbjct: 498 FVNRVLFPYFAGFNLLIQDGADFREIDKVMEKEFGWPMGPAYLLDVVGIDTAFHAEQVMA 557
Query: 549 KAFPDRSFQ--SPLVDLLLKSGRNGKANGKGLYTYEKGSKPKP----DPSVLPIIEECRR 602
+ FP R + +D++ + R G+ NGKG Y YE K KP DP ++ R+
Sbjct: 558 QGFPQRMQKVGKNAIDIMFEQQRFGQKNGKGFYLYETDKKGKPKKIDDPHTDELLFAIRQ 617
Query: 603 LSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRG 662
S T++EI+ ++ P+VNE R LEEGI+ SD D A V G+ FP +RG
Sbjct: 618 NKR--------SFTKEEIIARMMAPMVNEVVRCLEEGIIQSPSDADIALVYGLGFPPFRG 669
Query: 663 GIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
G+ + D +G+ + + +S L + P+ E+ AT
Sbjct: 670 GVFCYLDTLGSQSYVKTAESYSHLSPLYQVPNGLKEKAATNA 711
>gi|114576524|ref|XP_515339.2| PREDICTED: trifunctional enzyme subunit alpha, mitochondrial
isoform 3 [Pan troglodytes]
gi|397513608|ref|XP_003827103.1| PREDICTED: trifunctional enzyme subunit alpha, mitochondrial [Pan
paniscus]
gi|410261914|gb|JAA18923.1| hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA
hydratase (trifunctional protein), alpha subunit [Pan
troglodytes]
gi|410307860|gb|JAA32530.1| hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA
hydratase (trifunctional protein), alpha subunit [Pan
troglodytes]
gi|410338747|gb|JAA38320.1| hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA
hydratase (trifunctional protein), alpha subunit [Pan
troglodytes]
Length = 763
Score = 327 bits (838), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 227/728 (31%), Positives = 363/728 (49%), Gaps = 40/728 (5%)
Query: 5 RVTMEVGNDGVAIITLINPP---VNALAIPIVAGLKDKFEEATSRDDVK-AIVLTGNGGR 60
R + G G + IN P VN L+ + + + E + D ++ A++++ G
Sbjct: 38 RTHINYGVKGDVAVVRINSPNSKVNTLSKELHSEFSEVMNEIWASDQIRSAVLISSKPGC 97
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
F G DIN+ +V+ + + +V +E KPIVAA+ G LGGGLE+A+ C
Sbjct: 98 FIAGADINMLAACKTLQEVTQLSQ-EAQRIVEKLEKSTKPIVAAINGSCLGGGLEVAISC 156
Query: 121 HARIAAP--KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLG 175
RIA KT LG PE+ LG +PG TQRLP++VG+ A++MML +SI ++ K+G
Sbjct: 157 QYRIATKDRKTVLGTPEVLLGALPGAGGTQRLPKMVGVPAALDMMLTGRSIRADRAKKMG 216
Query: 176 LIDAVV-------------TSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEA-- 220
L+D +V T E L +V+ +A +A ++ R +KL + +
Sbjct: 217 LVDQLVEPLGPGLKPPEERTIEYLEEVAITFAKGLADKKISPKRDKGLVEKLTAYAMTIP 276
Query: 221 ---REVLKLARLQAKKTAPNM-PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 276
++V K + +K + P +DV++ GI G +G L E++ F ELVM S
Sbjct: 277 FVRQQVYKKVEEKVRKQTKGLYPAPLKIIDVVKTGIEQGSDAGYLSESQKFGELVMTKES 336
Query: 277 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 336
+ L+ ++ Q K G + V+ +A++G GLMG+GIA + + +LK+
Sbjct: 337 KALMGLYHGQVLCKK----NKFGAPQKDVKHLAILGAGLMGAGIAQVSVDKGLKTILKDA 392
Query: 337 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 396
L +G + + + V + LT + ++ L G LDY F+ DMVIEAV E +
Sbjct: 393 TLTALDRGQQQVFKGLNDKVKKKALTSFERDSIFSNLTGQLDYQGFEKADMVIEAVFEDL 452
Query: 397 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 456
LK ++ E+E P HCI A+NTS + ++ + + +++IG H+FSP M LLEI+
Sbjct: 453 SLKHRVLKEVEAVIPDHCIFASNTSALPISEIAAVSKRPEKVIGMHYFSPVDKMQLLEII 512
Query: 457 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 516
TE+TS + VG KV +VV + GF R P ++ GVD ++D
Sbjct: 513 TTEKTSKDTSASAVAVGLKQGKVIIVVKDGPGFYTTRCLAPMMSEVIRILQEGVDPKKLD 572
Query: 517 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKAN 574
S SFG P+G L+D G VA +++ K F +R L+ ++ G G+ +
Sbjct: 573 SLTTSFGFPVGAATLVDEVGVDVAKHVAEDLGKVFGERFGGGNPELLTQMVSKGFLGRKS 632
Query: 575 GKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCR 634
GKG Y Y++G K K S + I +L P +S ++++I ++ VNE+
Sbjct: 633 GKGFYIYQEGVKRKDLNSDMDSILASLKL----PPKSEVS-SDEDIQFRLVTRFVNEAVM 687
Query: 635 VLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPS 694
L+EGI+ ++ D +V G+ FP GG + D GA + LKK+ YG F P
Sbjct: 688 CLQEGILATPAEGDIGAVFGLGFPPCLGGPFRFVDLYGAQKIVDRLKKYEAAYGKQFTPC 747
Query: 695 RFLEERAT 702
+ L + A
Sbjct: 748 QLLADHAN 755
>gi|85712928|ref|ZP_01043968.1| Fatty oxidation complex, alpha subunit [Idiomarina baltica OS145]
gi|85693234|gb|EAQ31192.1| Fatty oxidation complex, alpha subunit [Idiomarina baltica OS145]
Length = 708
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 246/718 (34%), Positives = 373/718 (51%), Gaps = 44/718 (6%)
Query: 8 MEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSR--------DDVKAIV-LTGNG 58
+ V +DG+A+IT+ P + LKD F + R D+K +V ++G
Sbjct: 9 LAVRDDGIAVITIDVPGER------MNTLKDSFADEVGRLMNRLEDNSDLKGVVFISGKP 62
Query: 59 GRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAM 118
F G DIN+ A D + + + + IE P+VAA+ G LGGGLELAM
Sbjct: 63 DSFIAGADINMINDCETAADTESLARKG-QAMFDRIEQLNVPVVAAIHGACLGGGLELAM 121
Query: 119 GCHARIA--APKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWK 173
CH R+ + KT LGLPE+ LG++PG TQRLP LVG+ + + M+L K + +++ K
Sbjct: 122 ACHVRVCTDSDKTALGLPEVQLGLLPGSGGTQRLPALVGVQQGLTMILTGKQLRAKQALK 181
Query: 174 LGLIDAVVTSEELLKVSRLWALDIAARRKPW-IRSLHRTDKLGSLSEAREVL-KLARLQA 231
GL+D +V LL+ + A A+ ++ + + L + + R ++ K A QA
Sbjct: 182 AGLVDEIVPQSILLEAAVKQAKKAKAKPSKANLKGMSKL--LEATAYGRGIIYKKAGEQA 239
Query: 232 K-KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATS 290
+ K N P + ++ G+ +G +G+ EA+ F EL M S L +FFA
Sbjct: 240 QAKAKGNYPAIDKIIKAVKTGVENGRDAGLDYEARAFGELAMTPESYQLRQIFFATTEMK 299
Query: 291 KVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIE 349
K G+KP +++V V+GGGLMG GIA I +K+++ E + +
Sbjct: 300 KETGAD--GVKPADIKRVGVLGGGLMGGGIAFVTAAKAGIPARIKDISPEGITHALHYSY 357
Query: 350 ANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKA 409
+ V R + + + + L G LDYS F VD+VIEAV E + LK+K+ +++E
Sbjct: 358 ERLNKKVKRRHMRRAELEKTMLSLSGSLDYSGFDRVDVVIEAVFEDLDLKKKMVADVENN 417
Query: 410 CPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDL 469
I ATNTS++ + + E DR+IG H+FSP MPL EI+ E TS + I
Sbjct: 418 GKDGVIFATNTSSLPITQIAEGAQHPDRVIGLHYFSPVDKMPLAEIITHENTSKETIATT 477
Query: 470 MTVGKIIKKVPVVVGNCTGFAVNRAFFPY-SQSARLLVSLGVDVFRIDSAIRSFGLPIGP 528
+ + K K P+VV + GF VNR PY +++ARLL++ G + ID ++ FG P+GP
Sbjct: 478 VALTKKQGKTPIVVKDGAGFFVNRILAPYMNEAARLLIA-GEPIEHIDKSLVKFGFPVGP 536
Query: 529 FQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLV-DLLLKSGRNGKANGKGLYTYEKGSKP 587
LLD G VAA + K R F++P D L+ GR GK N KG Y Y KG K
Sbjct: 537 ITLLDEVGIDVAAKVAPILVKELGTR-FEAPAAFDKLIDDGRKGKKNNKGFYQYGKGVKG 595
Query: 588 KP-DPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASD 646
KP D SV ++ NI P K EI E+ + P++NE+ L+EGI+ A D
Sbjct: 596 KPVDKSVYGLL-------NIEPQAKH---EGDEIAELCVLPMLNEAAYCLQEGIIRSARD 645
Query: 647 LDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
D SV G+ FP +RGG + DA G + +++ ++ G+ ++P+ L++ A +G
Sbjct: 646 GDIGSVFGIGFPPFRGGPFRYMDAEGIGSIVKRMERLAEQRGDRYQPAPLLKQMAEQG 703
>gi|417791290|ref|ZP_12438760.1| multifunctional fatty acid oxidation complex subunit alpha
[Cronobacter sakazakii E899]
gi|449307426|ref|YP_007439782.1| multifunctional fatty acid oxidation complex subunit alpha
[Cronobacter sakazakii SP291]
gi|333954628|gb|EGL72460.1| multifunctional fatty acid oxidation complex subunit alpha
[Cronobacter sakazakii E899]
gi|449097459|gb|AGE85493.1| multifunctional fatty acid oxidation complex subunit alpha
[Cronobacter sakazakii SP291]
Length = 717
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 233/714 (32%), Positives = 361/714 (50%), Gaps = 35/714 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
+++ D VA++T+ P +N L ++ + D+ +V ++ F
Sbjct: 8 NLQMRPDNVAVVTIDVPGEKMNTLKAEFARDVRAIVKTLRENRDLAGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +++ I +VAA+ G LGGGLELA+ CH+R
Sbjct: 68 GADINMIAHCQSAQEAEALASQGQQIMAE-IHALPVHVVAAIHGACLGGGLELALACHSR 126
Query: 124 IAAP--KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
I KT LGLPE+ LG++PG TQRLPRLVG+S A+EM+L K + + K GL+D
Sbjct: 127 ICTDDVKTLLGLPEVQLGLLPGSGGTQRLPRLVGVSTALEMILAGKQLRPRQALKAGLVD 186
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 236
VV LL+ A ++A + +P R L ++L G + A + + +KT
Sbjct: 187 DVVPQSILLEA----AAELAKKHRPAPRRLPVRERLLAGPIGRALLFRMVTQKTHQKTHG 242
Query: 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 296
N P Q +DV+ G+ G SG EA+ F EL M S L +FFA T+++ T
Sbjct: 243 NYPAAQRIIDVVRTGLEQGSTSGYQAEARAFGELAMTPESAALRGLFFA---TTELKKET 299
Query: 297 DIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEANVRGL 355
PR + V ++GGGLMG GIA + V +K+++ + + +K +
Sbjct: 300 GSEAAPRALHSVGILGGGLMGGGIAYVTATKARLPVRIKDISEKGINHALKYSWDLLEKK 359
Query: 356 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCI 415
V R L + + + ++ DY F D+V+EAV E + LKQ + +E+E PH I
Sbjct: 360 VRRRHLRASERDAQMALISASTDYRGFHQRDIVVEAVFEDLTLKQNMVAEIEAHTAPHTI 419
Query: 416 LATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKI 475
A+NTS++ + + + +++IG H+FSP MPL+E++ TSA+ I + + K
Sbjct: 420 FASNTSSLPIGDIAAGATRPEQVIGLHYFSPVDKMPLVEVIPHAGTSAETIATTVQLAKK 479
Query: 476 IKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLA 535
K P+VV +C GF VNR PY A + G + +ID A+ G P+GP QLLD
Sbjct: 480 QGKTPIVVADCAGFYVNRILAPYINEAMRCLMEGESIEKIDEALVKRGFPVGPIQLLDEV 539
Query: 536 GYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTYE---KGSKPKPD 590
G V ++A+ R F +P V +L R G+ NG+G Y Y + SK + D
Sbjct: 540 GIDVGTKIMPVLERAYGPR-FSAPGDAVAAILNDDRKGRKNGRGFYLYPAKGRKSKKQVD 598
Query: 591 PSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDA 650
P+V +I + PGGK ++ +EI E + ++NE+ R L+EG+V A D D
Sbjct: 599 PAVYGLI-------GVKPGGK---LSGEEIAERCVMMMLNEAARCLDEGVVRSARDGDIG 648
Query: 651 SVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
+V G+ FP + GG + D +GA V +L + + YG+ F P L A G
Sbjct: 649 AVFGIGFPPFLGGPFRYMDTLGAAAVVATLTRLATRYGDRFTPCDRLLRMAQTG 702
>gi|298157738|gb|EFH98817.1| fatty acid oxidation complex alpha subunit [Pseudomonas savastanoi
pv. savastanoi NCPPB 3335]
Length = 721
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 214/686 (31%), Positives = 353/686 (51%), Gaps = 40/686 (5%)
Query: 49 VKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMP-DVSVELVVNLIEDCKKPIVAAVEG 107
VK ++++ F G DI F + L+ ++ + + ED P V A+ G
Sbjct: 53 VKGVIVSSGKDVFIVGADITEFVDNFKLPEAELVAGNLQANRIFSDFEDLGVPTVVAING 112
Query: 108 LALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSK 164
+ALGGGLE+ + R+ + ++GLPE+ LG+ PG T RLPR++G AIE + K
Sbjct: 113 IALGGGLEMCLAADYRVISSSARIGLPEVKLGLYPGFGGTVRLPRIIGADNAIEWIASGK 172
Query: 165 SITSEEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGSL 217
++E+ K+G +DAVV E +L++ + LD A+R+P + L KL ++
Sbjct: 173 ESSAEDALKVGAVDAVVAPEKLQAAALDLIQRAISGELDYKAKRQPKLDKL----KLNAI 228
Query: 218 SEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSR 277
+ A + PN P + I++ G + EA F ++ ++
Sbjct: 229 EQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKMAKTSAAQ 288
Query: 278 GLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 337
L+ +F + K D K V++ AV+G G+MG GIA + +++K++
Sbjct: 289 SLIGLFLNDQELKKKAKGYDAVAKE--VKQAAVLGAGIMGGGIAYQSAVKGTPILMKDIR 346
Query: 338 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 397
E + G+ + G + +G+LT K AL ++ L Y +F +VD+V+EAV+E+
Sbjct: 347 EEAIQLGLNEASKLLGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVEAVVENPK 406
Query: 398 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 457
+KQ + +E+E H ILA+NTSTI ++++ + + +G HFF+P H+MPL+E++R
Sbjct: 407 VKQAVLAEVEANVGEHTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIR 466
Query: 458 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 517
E++S + + + + + K P+VV +C GF VNR FPY LVS GVD RID
Sbjct: 467 GEKSSEEAVATTVAYARKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGVDFVRIDK 526
Query: 518 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKANG 575
+ FG P+GP L+D+ G + FPDR + +VD L ++ R G+ NG
Sbjct: 527 VMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSVVDALYEAKRLGQKNG 586
Query: 576 KGLYTYEKGSKPKP----DPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILFP 627
KG Y YE K KP DP+VL PI+ E R V++++I+ ++ P
Sbjct: 587 KGFYAYETDKKGKPKKVNDPAVLDVLKPIVYEQRE------------VSDEDIINWMMIP 634
Query: 628 VVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLY 687
+ E+ R LE+GIV A++ D + G+ FP +RGG + + D++G ++++L
Sbjct: 635 LCLETVRCLEDGIVETAAEADMGLIYGIGFPPFRGGALRYIDSIGVAEFVALADQYAEL- 693
Query: 688 GNFFKPSRFLEERATKGIPLSAPVSS 713
G ++P+ L E A+KG SS
Sbjct: 694 GALYQPTAKLREMASKGQSFFGQASS 719
>gi|419959285|ref|ZP_14475340.1| multifunctional fatty acid oxidation complex subunit alpha
[Enterobacter cloacae subsp. cloacae GS1]
gi|388605796|gb|EIM35011.1| multifunctional fatty acid oxidation complex subunit alpha
[Enterobacter cloacae subsp. cloacae GS1]
Length = 715
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 237/709 (33%), Positives = 355/709 (50%), Gaps = 37/709 (5%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA+IT+ P +N L ++ + ++ +V ++ F G DIN+
Sbjct: 14 DNVAVITIDVPDEKMNTLKAEFGVQVRAMLRQIRENKAIRGLVFISAKPDNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA--P 127
+ A + + +++ I P+VAA+ G LGGGLELA+ CH+RI
Sbjct: 74 IARAKSAQEAEDLARQGQQVMAE-IHALSIPVVAAIHGACLGGGLELALACHSRICTDDA 132
Query: 128 KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 184
KT LGLPE+ LG++PG TQRLPRLVG+S A+EM+L K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALEMILTGKQLRARQALKAGLVDEVVPHA 192
Query: 185 ELLKVSRLWALDIAARRKPW-IRSLHRTDKLGSLSEAREVLK--LARLQAKKTAPNMPQH 241
LL+ + AL ++P +R LG R +L + + +KT N P
Sbjct: 193 ILLEAAVERALKGRQAKRPLPVRERILAGPLG-----RTLLFNIVGKKTEQKTKGNYPAA 247
Query: 242 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 301
L VIE G+ G SG EAK F EL M S+ L +FFA K P +
Sbjct: 248 TRILKVIETGLSQGSSSGYAAEAKAFGELAMTPQSQALRGIFFASTEVKKDPGSE---AE 304
Query: 302 PRGVRKVAVIGGGLMGSGIA-TAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGK 360
P +R V V+GGGLMG GIA I + V +K++N + + ++ N+ V R
Sbjct: 305 PAPLRAVGVLGGGLMGGGIAFVTAIKGKLPVRIKDINPKGINHALQYSWQNLDRKVKRRH 364
Query: 361 LTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 420
+ + + L M+ G DYS F D+VIEAV E + LKQ++ +++E+ C PH I A+NT
Sbjct: 365 IKASERDKTLAMITGATDYSGFAHRDLVIEAVFEDLALKQQMVADVEQHCAPHTIFASNT 424
Query: 421 STIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVP 480
S++ + + K +++IG H+FSP MPL+E++ TS Q I ++ + K K P
Sbjct: 425 SSLPIGDIAAKAVRPEQVIGLHYFSPVEKMPLVEVIPHATTSPQTIATVVKLAKKQGKTP 484
Query: 481 VVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVA 540
+VV + GF VNR PY A L++ G + +D A+ FG P+GP QLLD G
Sbjct: 485 IVVADKAGFYVNRILAPYINEAMRLLTEGEKIEHVDDALVKFGFPVGPIQLLDEVGIDTG 544
Query: 541 AATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTYE---KGSKPKPDPSVLP 595
+ A+ DR F P V +LK R G+ N +G Y Y + SK + DPSV
Sbjct: 545 TKIIPVLEAAYGDR-FAPPANFVSAILKDDRKGRKNERGFYLYAAKGRKSKKQVDPSVYA 603
Query: 596 IIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGM 655
+I P ++ + E + ++NE+ R E ++ A D D +V G+
Sbjct: 604 LI----------PVTGQAKLSAVQCAERCVMMMLNEAARCFGEQVIKSARDGDIGAVFGI 653
Query: 656 SFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
FP + GG + D +GA V L++ + YG F P L + A +G
Sbjct: 654 GFPPFLGGPFRYMDTLGAGEVVAILQRLASQYGPRFTPCDELLQMAERG 702
>gi|388454076|ref|NP_001252819.1| trifunctional enzyme subunit alpha, mitochondrial [Macaca mulatta]
gi|380788603|gb|AFE66177.1| trifunctional enzyme subunit alpha, mitochondrial precursor [Macaca
mulatta]
gi|383414407|gb|AFH30417.1| trifunctional enzyme subunit alpha, mitochondrial precursor [Macaca
mulatta]
gi|384943176|gb|AFI35193.1| trifunctional enzyme subunit alpha, mitochondrial precursor [Macaca
mulatta]
Length = 763
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 225/728 (30%), Positives = 365/728 (50%), Gaps = 40/728 (5%)
Query: 5 RVTMEVGNDGVAIITLINPP---VNALAIPIVAGLKDKFEEATSRDDVK-AIVLTGNGGR 60
R + G G + IN P VN L+ + + + E + D ++ A++++ G
Sbjct: 38 RTHINYGVKGDVAVVRINSPNSKVNTLSKELHSEFTEVMNEIWASDQIRSAVLISSKPGC 97
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
F G DIN+ +V+ + + ++ +E KP+VAA+ G LGGGLELA+ C
Sbjct: 98 FIAGADINMLSACKTLQEVTQLSQ-EAQRILEKLEKSPKPVVAAINGSCLGGGLELAISC 156
Query: 121 HARIAAP--KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLG 175
RIA KT LG+PE+ LG +PG TQRLP++VG+ A++MML ++I ++ K+G
Sbjct: 157 QYRIATKDRKTVLGVPEVLLGALPGAGGTQRLPKMVGVPAALDMMLTGRNIRADRAKKMG 216
Query: 176 LIDAVV-------------TSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEA-- 220
L+D +V T E L +V+ +A +A ++ R+ +KL + +
Sbjct: 217 LVDQLVEPLGPGLKPPEERTMEYLEEVAITFAKGLADKKISPKRNKGLVEKLTAYAMTIP 276
Query: 221 ---REVLKLARLQAKKTAPNM-PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 276
++V K + +K + P +DV++ GI G +G L E++ F ELVM S
Sbjct: 277 FVRQQVYKKVEEKVRKQTKGLYPAPLKIIDVVKTGIEQGSDAGYLSESQKFGELVMTKES 336
Query: 277 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 336
+ L+ ++ Q K G + V+ +A++G GLMG+GIA + + +LK+
Sbjct: 337 KALMGLYHGQVLCKK----NKFGAPQKDVKHLAILGAGLMGAGIAQVSVDKGLKTILKDA 392
Query: 337 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 396
L +G + + + V + LT + ++ L G LDY F+ DMVIEAV E +
Sbjct: 393 TLTGLDRGQQQVFKGLNDKVKKKALTSFERDSIFSNLTGQLDYQGFEKADMVIEAVFEDL 452
Query: 397 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 456
LK ++ E+E P HCI A+NTS + ++ + + +++IG H+FSP M LLEI+
Sbjct: 453 SLKHRVLKEVEAVIPDHCIFASNTSALPISEIAAVSKRPEKVIGMHYFSPVDKMQLLEII 512
Query: 457 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 516
TE+TS + VG KV +VV + GF R P ++ GVD ++D
Sbjct: 513 TTEKTSRDTSASAVAVGLKQGKVIIVVKDGPGFYTTRCLAPMMSEVIRILQEGVDPKKLD 572
Query: 517 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKAN 574
S SFG P+G L+D G VA +++ K F +R L+ ++ G G+ +
Sbjct: 573 SLTTSFGFPVGAATLVDEVGVDVAKHVAEDLGKVFGERFGGGNPELLTQMVSKGFLGRKS 632
Query: 575 GKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCR 634
GKG Y Y++G K K S + I +L P +S ++++I ++ VNE+
Sbjct: 633 GKGFYIYQEGVKRKDLNSDMDSILASLKL----PPKSEVS-SDEDIQFRLVTRFVNEAVM 687
Query: 635 VLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPS 694
L+EGI+ ++ D +V G+ FP GG + D GA + LKK+ YG F P
Sbjct: 688 CLQEGILATPAEGDIGAVFGLGFPPCLGGPFRFVDLYGAQTIVDRLKKYEAAYGKQFTPC 747
Query: 695 RFLEERAT 702
+ L + A
Sbjct: 748 QLLADHAN 755
>gi|289625348|ref|ZP_06458302.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas syringae pv. aesculi str. NCPPB 3681]
gi|422582917|ref|ZP_16658048.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas syringae pv. aesculi str. 0893_23]
gi|330867755|gb|EGH02464.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas syringae pv. aesculi str. 0893_23]
Length = 721
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 214/688 (31%), Positives = 353/688 (51%), Gaps = 40/688 (5%)
Query: 49 VKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMP-DVSVELVVNLIEDCKKPIVAAVEG 107
VK ++++ F G DI F + L+ ++ + + ED P V A+ G
Sbjct: 53 VKGVIVSSGKDVFIVGADITEFVDNFKLPEAELVAGNLQANRIFSDFEDLGVPTVVAING 112
Query: 108 LALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSK 164
+ALGGGLE+ + R+ + ++GLPE+ LG+ PG T RLPR++G AIE + K
Sbjct: 113 IALGGGLEMCLAADYRVISSSARIGLPEVKLGLYPGFGGTVRLPRIIGADNAIEWIASGK 172
Query: 165 SITSEEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGSL 217
++E+ K+G +DAVV E +L++ + LD A+R+P + L KL ++
Sbjct: 173 ENSAEDALKVGAVDAVVAPEKLQAAALDLIQRAISGELDYKAKRQPKLDKL----KLNAI 228
Query: 218 SEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSR 277
+ A + PN P + I++ G + EA F ++ ++
Sbjct: 229 EQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKMAKTSAAQ 288
Query: 278 GLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 337
L+ +F + K D K V++ AV+G G+MG GIA + +++K++
Sbjct: 289 SLIGLFLNDQELKKKAKGYDAVAKD--VKQAAVLGAGIMGGGIAYQSAVKGTPILMKDIR 346
Query: 338 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 397
E + G+ + G + +G+LT K AL ++ L Y +F +VD+V+EAV+E+
Sbjct: 347 EEAIQLGLNEASKLLGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVEAVVENPK 406
Query: 398 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 457
+KQ + +E+E H ILA+NTSTI ++++ + + +G HFF+P H+MPL+E++R
Sbjct: 407 VKQAVLAEVEANVGEHTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIR 466
Query: 458 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 517
E++S + + + + + K P+VV +C GF VNR FPY LVS GVD RID
Sbjct: 467 GEKSSEEAVATTVAYARKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGVDFVRIDK 526
Query: 518 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKANG 575
+ FG P+GP L+D+ G + FPDR + +VD L ++ R G+ NG
Sbjct: 527 VMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSVVDALYEAKRLGQKNG 586
Query: 576 KGLYTYEKGSKPKP----DPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILFP 627
KG Y YE K KP DP+VL PI+ E R V++++I+ ++ P
Sbjct: 587 KGFYAYETDKKGKPKKVNDPAVLDVLKPIVYEQRE------------VSDEDIINWMMIP 634
Query: 628 VVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLY 687
+ E+ R LE+GIV A++ D + G+ FP +RGG + + D++G ++++L
Sbjct: 635 LCLETVRCLEDGIVETAAEADMGLIYGIGFPPFRGGALRYIDSIGVAEFVALADQYAEL- 693
Query: 688 GNFFKPSRFLEERATKGIPLSAPVSSSS 715
G ++P+ L E A+KG SS
Sbjct: 694 GALYQPTAKLREMASKGQSFFGQASSEE 721
>gi|402890280|ref|XP_003908416.1| PREDICTED: trifunctional enzyme subunit alpha, mitochondrial [Papio
anubis]
Length = 763
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 225/728 (30%), Positives = 365/728 (50%), Gaps = 40/728 (5%)
Query: 5 RVTMEVGNDGVAIITLINPP---VNALAIPIVAGLKDKFEEATSRDDVK-AIVLTGNGGR 60
R + G G + IN P VN L+ + + + E + D ++ A++++ G
Sbjct: 38 RTHINYGVKGDVAVVRINSPNSKVNTLSKELHSEFTEVMNEIWASDQIRSAVLISSKPGC 97
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
F G DIN+ +V+ + + ++ +E KP+VAA+ G LGGGLELA+ C
Sbjct: 98 FIAGADINMLSACKTLQEVTQLSQ-EAQRILEKLEKSPKPVVAAINGSCLGGGLELAISC 156
Query: 121 HARIAAP--KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLG 175
RIA KT LG+PE+ LG +PG TQRLP++VG+ A++MML ++I ++ K+G
Sbjct: 157 QYRIATKDRKTVLGVPEVLLGALPGAGGTQRLPKMVGVPAALDMMLTGRNIRADRAKKMG 216
Query: 176 LIDAVV-------------TSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEA-- 220
L+D +V T E L +V+ +A +A ++ R+ +KL + +
Sbjct: 217 LVDQLVEPLGPGLKPPEERTMEYLEEVAITFAKGLADKKISPKRNKGLVEKLTAYAMTIP 276
Query: 221 ---REVLKLARLQAKKTAPNM-PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 276
++V K + +K + P +DV++ GI G +G L E++ F ELVM S
Sbjct: 277 FVRQQVYKKVEEKVRKQTKGLYPAPLKIIDVVKTGIEQGSDAGYLSESQKFGELVMTKES 336
Query: 277 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 336
+ L+ ++ Q K G + V+ +A++G GLMG+GIA + + +LK+
Sbjct: 337 KALMGLYHGQVLCKK----NKFGAPQKDVKHLAILGAGLMGAGIAQVSVDKGLKTILKDA 392
Query: 337 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 396
L +G + + + V + LT + ++ L G LDY F+ DMVIEAV E +
Sbjct: 393 TLTGLDRGQQQVFKGLNDKVKKKALTSFERDSIFSNLTGQLDYQGFEKADMVIEAVFEDL 452
Query: 397 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 456
LK ++ E+E P HCI A+NTS + ++ + + +++IG H+FSP M LLEI+
Sbjct: 453 SLKHRVLKEVEAVIPDHCIFASNTSALPISEIAAVSKRPEKVIGMHYFSPVDKMQLLEII 512
Query: 457 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 516
TE+TS + VG KV +VV + GF R P ++ GVD ++D
Sbjct: 513 TTEKTSRDTSASAVAVGLKQGKVIIVVKDGPGFYTTRCLAPMMSEVIRILQEGVDPKKLD 572
Query: 517 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKAN 574
S SFG P+G L+D G VA +++ K F +R L+ ++ G G+ +
Sbjct: 573 SLTTSFGFPVGAATLVDEVGVDVAKHVAEDLGKVFGERFGGGNPELLTQMVSKGFLGRKS 632
Query: 575 GKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCR 634
GKG Y Y++G K K S + I +L P +S ++++I ++ VNE+
Sbjct: 633 GKGFYIYQEGVKRKDLNSDMDSILASLKL----PPKSEVS-SDEDIQFRLVTRFVNEAVM 687
Query: 635 VLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPS 694
L+EGI+ ++ D +V G+ FP GG + D GA + LKK+ YG F P
Sbjct: 688 CLQEGILATPAEGDIGAVFGLGFPPCLGGPFRFVDLYGAQKIVDRLKKYEAAYGKQFTPC 747
Query: 695 RFLEERAT 702
+ L + A
Sbjct: 748 QLLADHAN 755
>gi|20127408|ref|NP_000173.2| trifunctional enzyme subunit alpha, mitochondrial precursor [Homo
sapiens]
gi|20141376|sp|P40939.2|ECHA_HUMAN RecName: Full=Trifunctional enzyme subunit alpha, mitochondrial;
AltName: Full=78 kDa gastrin-binding protein; AltName:
Full=TP-alpha; Includes: RecName: Full=Long-chain
enoyl-CoA hydratase; Includes: RecName: Full=Long chain
3-hydroxyacyl-CoA dehydrogenase; Flags: Precursor
gi|14328041|gb|AAH09235.1| Hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A
thiolase/enoyl-Coenzyme A hydratase (trifunctional
protein), alpha subunit [Homo sapiens]
gi|119621108|gb|EAX00703.1| hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A
thiolase/enoyl-Coenzyme A hydratase (trifunctional
protein), alpha subunit, isoform CRA_a [Homo sapiens]
gi|123984943|gb|ABM83702.1| hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A
thiolase/enoyl-Coenzyme A hydratase (trifunctional
protein), alpha subunit [synthetic construct]
gi|123998787|gb|ABM87022.1| hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A
thiolase/enoyl-Coenzyme A hydratase (trifunctional
protein), alpha subunit [synthetic construct]
gi|189053609|dbj|BAG35861.1| unnamed protein product [Homo sapiens]
gi|317040156|gb|ADU87643.1| epididymis tissue sperm binding protein Li 14m [Homo sapiens]
Length = 763
Score = 326 bits (836), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 227/728 (31%), Positives = 363/728 (49%), Gaps = 40/728 (5%)
Query: 5 RVTMEVGNDGVAIITLINPP---VNALAIPIVAGLKDKFEEATSRDDVK-AIVLTGNGGR 60
R + G G + IN P VN L+ + + + E + D ++ A++++ G
Sbjct: 38 RTHINYGVKGDVAVVRINSPNSKVNTLSKELHSEFSEVMNEIWASDQIRSAVLISSKPGC 97
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
F G DIN+ +V+ + + +V +E KPIVAA+ G LGGGLE+A+ C
Sbjct: 98 FIAGADINMLAACKTLQEVTQLSQ-EAQRIVEKLEKSTKPIVAAINGSCLGGGLEVAISC 156
Query: 121 HARIAAP--KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLG 175
RIA KT LG PE+ LG +PG TQRLP++VG+ A++MML +SI ++ K+G
Sbjct: 157 QYRIATKDRKTVLGTPEVLLGALPGAGGTQRLPKMVGVPAALDMMLTGRSIRADRAKKMG 216
Query: 176 LIDAVV-------------TSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEA-- 220
L+D +V T E L +V+ +A +A ++ R +KL + +
Sbjct: 217 LVDQLVEPLGPGLKPPEERTIEYLEEVAITFAKGLADKKISPKRDKGLVEKLTAYAMTIP 276
Query: 221 ---REVLKLARLQAKKTAPNM-PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 276
++V K + +K + P +DV++ GI G +G L E++ F ELVM S
Sbjct: 277 FVRQQVYKKVEEKVRKQTKGLYPAPLKIIDVVKTGIEQGSDAGYLCESQKFGELVMTKES 336
Query: 277 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 336
+ L+ ++ Q K G + V+ +A++G GLMG+GIA + + +LK+
Sbjct: 337 KALMGLYHGQVLCKK----NKFGAPQKDVKHLAILGAGLMGAGIAQVSVDKGLKTILKDA 392
Query: 337 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 396
L +G + + + V + LT + ++ L G LDY F+ DMVIEAV E +
Sbjct: 393 TLTALDRGQQQVFKGLNDKVKKKALTSFERDSIFSNLTGQLDYQGFEKADMVIEAVFEDL 452
Query: 397 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 456
LK ++ E+E P HCI A+NTS + ++ + + +++IG H+FSP M LLEI+
Sbjct: 453 SLKHRVLKEVEAVIPDHCIFASNTSALPISEIAAVSKRPEKVIGMHYFSPVDKMQLLEII 512
Query: 457 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 516
TE+TS + VG KV +VV + GF R P ++ GVD ++D
Sbjct: 513 TTEKTSKDTSASAVAVGLKQGKVIIVVKDGPGFYTTRCLAPMMSEVIRILQEGVDPKKLD 572
Query: 517 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKAN 574
S SFG P+G L+D G VA +++ K F +R L+ ++ G G+ +
Sbjct: 573 SLTTSFGFPVGAATLVDEVGVDVAKHVAEDLGKVFGERFGGGNPELLTQMVSKGFLGRKS 632
Query: 575 GKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCR 634
GKG Y Y++G K K S + I +L P +S ++++I ++ VNE+
Sbjct: 633 GKGFYIYQEGVKRKDLNSDMDSILASLKL----PPKSEVS-SDEDIQFRLVTRFVNEAVM 687
Query: 635 VLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPS 694
L+EGI+ ++ D +V G+ FP GG + D GA + LKK+ YG F P
Sbjct: 688 CLQEGILATPAEGDIGAVFGLGFPPCLGGPFRFVDLYGAQKIVDRLKKYEAAYGKQFTPC 747
Query: 695 RFLEERAT 702
+ L + A
Sbjct: 748 QLLADHAN 755
>gi|392980099|ref|YP_006478687.1| multifunctional fatty acid oxidation complex subunit alpha
[Enterobacter cloacae subsp. dissolvens SDM]
gi|392326032|gb|AFM60985.1| multifunctional fatty acid oxidation complex subunit alpha
[Enterobacter cloacae subsp. dissolvens SDM]
Length = 715
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 226/707 (31%), Positives = 351/707 (49%), Gaps = 33/707 (4%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA+IT+ P +N L +++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVITIDVPDEKMNTLKAEFGVQVREMLKQIRENKAIRGLVFISAKPDNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA--P 127
+ A + + +++ I P++AA+ G LGGGLELA+ CH+RI
Sbjct: 74 IARAQSAQEAEDLARQGQQVMAE-IHALPIPVIAAIHGACLGGGLELALACHSRICTDDA 132
Query: 128 KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 184
KT LGLPE+ LG++PG TQRLPRLVG+S A+EM+L K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALEMILTGKQLRARQALKAGLVDDVVPHS 192
Query: 185 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 242
LL+ A+++A + + R L +++ G L + + +KT N P +
Sbjct: 193 ILLEA----AVELALKGRQAKRVLPVRERILAGPLGRTLLFSMVGKKTEQKTKGNYPAAK 248
Query: 243 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 302
L+VIE G+ G SG EAK F EL M S+ L +FFA K P +D P
Sbjct: 249 RILEVIETGLSQGSSSGYAAEAKAFGELAMTPQSQALRSIFFASTDVKKDPG-SDAEPAP 307
Query: 303 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 362
V G G TA + V +K++N + + ++ N+ V R +
Sbjct: 308 LNAVGVLGGGLMGGGIAFVTAS-KAKLPVRIKDINPKGINHALQYSWQNLDQKVKRRHIK 366
Query: 363 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 422
+ + + M+ G DY F D+VIEAV E + LKQ++ +++E+ C PH I A+NTS+
Sbjct: 367 ASERDKTVAMISGTTDYRGFAHRDLVIEAVFEDLALKQQMVADVEQHCAPHTIFASNTSS 426
Query: 423 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 482
+ + + K + +++IG HFFSP MPL+E++ TS Q + ++ + K K P+V
Sbjct: 427 LPIGDIAAKAARPEQVIGLHFFSPVEKMPLVEVIPHASTSPQTVSTVVKLAKKQGKTPIV 486
Query: 483 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAA 542
V + GF VNR PY A L+ G + +D A+ FG P+GP QLLD G
Sbjct: 487 VADKAGFYVNRILAPYINEAMRLLVEGEKIEHVDEALVKFGFPVGPIQLLDEVGIDTGTK 546
Query: 543 TSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DPSVLPII 597
+ A+ +R F P +V +LK R G+ N +G Y Y KG K K DPSV +I
Sbjct: 547 IIPVLEAAYGER-FSPPANIVSAILKDDRKGRKNERGFYLYGAKGRKSKKQVDPSVYGLI 605
Query: 598 EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSF 657
P ++ + E + ++NE+ R E ++ A D D +V G+ F
Sbjct: 606 ----------PTTGQAKLSAVQCAERCVMMMLNEAARCFGEQVIKSARDGDIGAVFGIGF 655
Query: 658 PSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
P + GG + D +GA V L++ + YG F P L + A +G
Sbjct: 656 PPFLGGPFRYMDTLGAGEVVAILQRLAAQYGPRFTPCDELLQMAERG 702
>gi|410955662|ref|XP_003984470.1| PREDICTED: LOW QUALITY PROTEIN: trifunctional enzyme subunit alpha,
mitochondrial [Felis catus]
Length = 763
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 225/729 (30%), Positives = 365/729 (50%), Gaps = 42/729 (5%)
Query: 5 RVTMEVGNDGVAIITLINPP---VNALAIPIVAGLKDKFEEATSRDDVK-AIVLTGNGGR 60
R + G G + IN P VN L+ + + + E + D ++ A++++ G
Sbjct: 38 RTHINYGVKGDVAVVRINSPNSKVNTLSRELQSEFVEVMNEIWANDQIRSAVLISSKPGC 97
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
F G DIN+ A +V+ + + L E KPIVAA+ G LGGGLELA+ C
Sbjct: 98 FIAGADINMLASCKSAEEVTQVSQEGQRMFEKL-EKSTKPIVAAISGSCLGGGLELAISC 156
Query: 121 HARIAAP--KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLG 175
RIA KT LG PE+ LG++PG TQRLP++VG+ A +MML ++I ++ K+G
Sbjct: 157 QYRIATKDRKTVLGSPEVLLGILPGAGGTQRLPKMVGVPAAFDMMLTGRNIRADRAKKMG 216
Query: 176 LIDAVV-------------TSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEA-- 220
L+D +V T E L +V+ +A +++ ++ R +KL S + +
Sbjct: 217 LVDQLVEPLGPGLKPSEERTIEYLEEVAVTFAKELSDKKISLKRDKGLVEKLTSYAMSIP 276
Query: 221 ---REVLKLARLQAKKTAPNM-PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 276
+++ K + +K + P +D ++ GI G +G + E++ F EL M S
Sbjct: 277 FVRQQIYKKVEEKVRKQTKGLYPAPLKIIDAVKTGIEQGNDAGYVSESQKFGELAMTKES 336
Query: 277 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 336
+ L+ ++ Q K G + V+ +A++G GLMG GIA + I +LK+
Sbjct: 337 KALMGLYHGQVLCKK----NKFGTPQKDVKHLAILGAGLMGXGIAQVSVDKGIKTILKDA 392
Query: 337 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 396
L +G + + + V + LT + ++ L G LDY F+ DMVIEAV E +
Sbjct: 393 TLAGLDRGQQQVFKGLNDKVKKKALTSFERDSIFSNLTGQLDYQGFEKADMVIEAVFEDL 452
Query: 397 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 456
+K ++ E+E P HC+ A+NTS + + + + +++IG H+FSP M LLEI+
Sbjct: 453 NVKHRVLKEVEAVVPDHCVFASNTSALPIRQIASVSKRPEKVIGMHYFSPVDKMQLLEII 512
Query: 457 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 516
TE+TS ++ VG KV VVV + GF R P ++ GVD ++D
Sbjct: 513 TTEKTSKDTTASVVAVGLKQGKVIVVVKDGPGFYTTRCLAPMMSEVLRILQEGVDPKKLD 572
Query: 517 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLL---LKSGRNGKA 573
S SFG P+G L+D G VA +++ KAF +R F+ V+LL + G G+
Sbjct: 573 SLTTSFGFPVGAATLVDEVGVDVAKHVAEDLGKAFGER-FEGGSVELLKQMVSRGFLGRK 631
Query: 574 NGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESC 633
+GKG Y Y++G K K S + I L+++ K +++++ ++ VNE+
Sbjct: 632 SGKGFYIYQEGVKNKSLNSDMDGI-----LASLKVPPKSDVCSDEDLQYRLVTRFVNEAI 686
Query: 634 RVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKP 693
L+EGI+ ++ D +V G+ FP GG + D GA + L+K+ YG F P
Sbjct: 687 MCLQEGILATPAEGDIGAVFGLGFPPCLGGPFRYVDLYGAQKIVDRLRKYEAAYGKPFTP 746
Query: 694 SRFLEERAT 702
+ L + A
Sbjct: 747 CQLLIDHAN 755
>gi|408372563|ref|ZP_11170263.1| short chain enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase
[Alcanivorax hongdengensis A-11-3]
gi|407767538|gb|EKF75975.1| short chain enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase
[Alcanivorax hongdengensis A-11-3]
Length = 719
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 239/715 (33%), Positives = 360/715 (50%), Gaps = 38/715 (5%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDV---KAIVL-TGNGGRFSGGFDI 67
++GVA++ IN P +A + A D F A S + KA+VL + G F G DI
Sbjct: 13 DNGVAVLE-INVPGDAQNT-LKAEFADDFNAAFSDIESARPKALVLYSTKPGSFMAGADI 70
Query: 68 NVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP 127
N+F+K A VS + + + L E P+VAA++G LGGGLELA+ C RIAA
Sbjct: 71 NLFEKAENAQQVSDLSTLCQQTFGKL-ETLGIPVVAAIKGACLGGGLELALACSYRIAAN 129
Query: 128 K--TQLGLPELTLGVIP---GTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 182
T LGLPE+ LG++P GTQRLPRLVG++ A++MML + + + K+GL+D VV
Sbjct: 130 SGDTVLGLPEVMLGLLPAGGGTQRLPRLVGIASALDMMLTGRQLKARPARKMGLVDEVVD 189
Query: 183 SEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEA---------REVLKLARLQA-K 232
+ + + A +A + SL L++A + V AR QA K
Sbjct: 190 AVAVYDRAVARAAQLAGEKDDAGISLGDYFSREGLTKAALEQNSLGRKVVFDQARKQAAK 249
Query: 233 KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 292
KT P A +D +E G +G G EA++F EL M S+ L +F A K
Sbjct: 250 KTHGLYPAPPAIIDAVEAGYENGLAQGYATEARLFGELAMSSQSKQLRGIFHATNTLKKE 309
Query: 293 PNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEAN 351
V D G++ R + + V+G GLMG+GIA + + V LK+ + + L G++ +
Sbjct: 310 TFVAD-GVQARQIHRTGVLGAGLMGAGIALTTVNKAKLPVRLKDRDDKGLAHGVQYLRDF 368
Query: 352 VRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACP 411
V +G ++ A+ L DYS FK +D+V+EAV E V LK + ++E+
Sbjct: 369 YNKRVKKGAMSAADASAELGRASFTSDYSGFKGLDLVVEAVFEDVKLKHLMLKDVEEHGN 428
Query: 412 PHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMT 471
I A+NTS+I + + +IG H+FSP MPLLEI+ T++T V +
Sbjct: 429 DQTIFASNTSSIPITEIARAAKRPQNVIGLHYFSPVEKMPLLEIITTDQTDPAVTAGCVA 488
Query: 472 VGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQL 531
GK K +VV + GF R PY A L++ GVDV ++D A+ FG P+GP L
Sbjct: 489 FGKAQGKTVIVVKDGPGFYTTRILAPYLNEATRLLTEGVDVKQVDQALVRFGFPVGPITL 548
Query: 532 LDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYE---KGSKPK 588
LD G V +KAF +R L++++ G+ +G+G Y YE KG K
Sbjct: 549 LDEVGVDVGTKVGPVLEKAFGERMASPDAAGLMIENNYLGRKSGRGFYIYEGVAKGEK-- 606
Query: 589 PDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLD 648
P+ L N+ ++EIV L+ ++NE+ L+EGI+ D
Sbjct: 607 ------PVNTALYELMNVT---TSRDADDEEIVSRCLWMMINEAAYCLQEGIISEPMHGD 657
Query: 649 DASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATK 703
++ G+ FP +RGG + D++G +L++ ++ YG FKP+ L + A K
Sbjct: 658 IGAIFGLGFPPFRGGPFRYMDSLGLVNAVRTLERLTEQYGERFKPAPILIDMAKK 712
>gi|295098035|emb|CBK87125.1| short chain enoyl-CoA hydratase /3-hydroxyacyl-CoA dehydrogenase
[Enterobacter cloacae subsp. cloacae NCTC 9394]
Length = 715
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 239/709 (33%), Positives = 357/709 (50%), Gaps = 37/709 (5%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA+IT+ P +N L ++ + ++ +V ++ F G DIN+
Sbjct: 14 DNVAVITIDVPDEKMNTLKAEFGVQVRAMLRQIRENKAIRGLVFISAKPHNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA--P 127
+ A + + +++ I P+VAA+ G LGGGLELA+ CH+RI
Sbjct: 74 IARAKSAQEAEDLARQGQQVMAE-IHALSIPVVAAIHGACLGGGLELALACHSRICTDDA 132
Query: 128 KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 184
KT LGLPE+ LG++PG TQRLPRLVG+S A+EM+L K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALEMILTGKQLRARQALKSGLVDEVVPHA 192
Query: 185 ELLKVSRLWALDIAARRKPW-IRSLHRTDKLGSLSEAREVL--KLARLQAKKTAPNMPQH 241
LL+ + AL ++P +R LG R +L + + +KT N P
Sbjct: 193 ILLEAAVERALKGRQAKRPLPVRERILAGPLG-----RTLLFNMVGKKTEQKTKGNYPAA 247
Query: 242 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 301
L VIE G+ G SG EAK F EL M S+ L +FFA K P +
Sbjct: 248 TRILKVIETGLSQGSSSGYAAEAKAFGELAMTPQSQALRGIFFASTEVKKDPGSE---AE 304
Query: 302 PRGVRKVAVIGGGLMGSGIA-TAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGK 360
P +R V V+GGGLMG GIA + V +K++N + + ++ N+ V R
Sbjct: 305 PAPLRAVGVLGGGLMGGGIAFVTASKGKLPVRIKDINPKGINHALQYSWQNLDRKVKRRH 364
Query: 361 LTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 420
+ + + L M+ G DYS F D+VIEAV E + LKQ++ +++E+ C PH I A+NT
Sbjct: 365 IKASERDKTLSMITGATDYSGFAHRDLVIEAVFEDLALKQQMVADVEQHCAPHTIFASNT 424
Query: 421 STIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVP 480
S++ + + K +++IG H+FSP MPL+E++ TS Q I ++ + K + K P
Sbjct: 425 SSLPIGDIAAKAVRPEQVIGLHYFSPVEKMPLVEVIPHATTSPQTIATVVKLAKKLGKTP 484
Query: 481 VVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVA 540
+VV + GF VNR PY A L++ G + +D A+ FG P+GP QLLD G
Sbjct: 485 IVVADKAGFYVNRILAPYINEAMRLLTEGEKIEHVDDALVKFGFPVGPIQLLDEVGIDTG 544
Query: 541 AATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTYE---KGSKPKPDPSVLP 595
+ A+ DR F P V +LK R G+ N +G Y Y + SK + DPSV
Sbjct: 545 TKIIPVLEAAYGDR-FAPPANFVSAILKDDRKGRKNERGFYLYAAKGRKSKKQVDPSVYA 603
Query: 596 IIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGM 655
+I + GK +V E M++ +NE+ R E ++ A D D +V G+
Sbjct: 604 LIP-------VTGQGKLSAVQCAERCVMMM---LNEAARCFGEQVIKSARDGDIGAVFGI 653
Query: 656 SFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 704
FP + GG + D +GA V L++ + YG F P L + A +G
Sbjct: 654 GFPPFLGGPFRYMDTLGAGEVVAILQRLASQYGPRFTPCDELLQMAERG 702
>gi|213969024|ref|ZP_03397164.1| fatty oxidation complex, alpha subunit [Pseudomonas syringae pv.
tomato T1]
gi|301385415|ref|ZP_07233833.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas syringae pv. tomato Max13]
gi|302061389|ref|ZP_07252930.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas syringae pv. tomato K40]
gi|213926323|gb|EEB59878.1| fatty oxidation complex, alpha subunit [Pseudomonas syringae pv.
tomato T1]
Length = 721
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 213/688 (30%), Positives = 351/688 (51%), Gaps = 42/688 (6%)
Query: 49 VKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPD-VSVELVVNLIEDCKKPIVAAVEG 107
VK +++T F G DI F + L+ D + + + ED P V A+ G
Sbjct: 53 VKGVIVTSGKDVFIVGADITEFVDNFKLPEAELVADNLEANRIFSDFEDLGVPTVVAING 112
Query: 108 LALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSK 164
+ALGGGLE+ + R+ + ++GLPE+ LG+ PG T RLPR++G AIE + K
Sbjct: 113 IALGGGLEMCLAADYRVISSSARVGLPEVKLGLYPGFGGTVRLPRIIGADNAIEWIASGK 172
Query: 165 SITSEEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGSL 217
++E+ K+G++DA+V E +L++ + D A+R+P + L KL ++
Sbjct: 173 ENSAEDALKVGVVDAIVAPEKLQAAALDLIQRAISGEFDYKAKRQPKLDKL----KLNAI 228
Query: 218 SEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSR 277
+ A + PN P + I++ G + EA F ++ ++
Sbjct: 229 EQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAASFGRDKALEIEAAGFVKMAKTSAAQ 288
Query: 278 GLVHVFFA-QRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 336
L+ +F Q K ++ R V++ AV+G G+MG GIA + +++K++
Sbjct: 289 SLIGLFLNDQELKKKAKGYDEVA---RDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKDI 345
Query: 337 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 396
E + G+ + G + +G+LT K AL ++ L Y +F +VD+V+EAV+E+
Sbjct: 346 REEAIQLGLNEASKLLGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVEAVVENP 405
Query: 397 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 456
+KQ + +E+E + ILA+NTSTI ++++ + + +G HFF+P H+MPL+E++
Sbjct: 406 KVKQAVLAEVEANVGENTILASNTSTISISLLAQALKRPENFVGMHFFNPVHMMPLVEVI 465
Query: 457 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 516
R E++S + + + K + K P+VV +C GF VNR FPY LVS GVD RID
Sbjct: 466 RGEKSSEEAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGVDFVRID 525
Query: 517 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKAN 574
+ FG P+GP L+D+ G + FPDR + VD L ++ R G+ N
Sbjct: 526 KVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDALYEANRLGQKN 585
Query: 575 GKGLYTYEKGSKPKP----DPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILF 626
GKG Y YE K KP DP+VL PI+ E R V++++I+ ++
Sbjct: 586 GKGFYVYETDKKGKPKKVNDPAVLDVLKPIVYEQRE------------VSDEDIINWMMI 633
Query: 627 PVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL 686
P+ E+ R LE+GIV A++ D + G+ FP +RGG + + D++G ++++L
Sbjct: 634 PLCLETVRCLEDGIVETAAEADMGLIYGIGFPPFRGGALRYIDSIGVAEFVALADRYAEL 693
Query: 687 YGNFFKPSRFLEERATKGIPLSAPVSSS 714
G ++P+ L E A G SS
Sbjct: 694 -GALYQPTAKLREMAANGQSFFGQASSE 720
>gi|289647496|ref|ZP_06478839.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas syringae pv. aesculi str. 2250]
Length = 721
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 212/677 (31%), Positives = 351/677 (51%), Gaps = 40/677 (5%)
Query: 49 VKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMP-DVSVELVVNLIEDCKKPIVAAVEG 107
VK ++++ F G DI F + L+ ++ + + ED P V A+ G
Sbjct: 53 VKGVIVSSGKDVFIVGADITEFVDNFKLPEAELVAGNLQANRIFSDFEDLGVPTVVAING 112
Query: 108 LALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSK 164
+ALGGGLE+ + R+ + ++GLPE+ LG+ PG T RLPR++G AIE + K
Sbjct: 113 IALGGGLEMCLAADYRVISSSARIGLPEVKLGLYPGFGGTVRLPRIIGADNAIEWIASGK 172
Query: 165 SITSEEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGSL 217
++E+ K+G +DAVV E +L++ + LD A+R+P + L KL ++
Sbjct: 173 ENSAEDALKVGAVDAVVAPEKLQAAALDLIQRAISGELDYKAKRQPKLDKL----KLNAI 228
Query: 218 SEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSR 277
+ A + PN P + I++ G + EA F ++ ++
Sbjct: 229 EQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKMAKTSAAQ 288
Query: 278 GLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 337
L+ +F + K D K V++ AV+G G+MG GIA + +++K++
Sbjct: 289 SLIGLFLNDQELKKKAKGYDAVAKD--VKQAAVLGAGIMGGGIAYQSAVKGTPILMKDIR 346
Query: 338 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 397
E + G+ + G + +G+LT K AL ++ L Y +F +VD+V+EAV+E+
Sbjct: 347 EEAIQLGLNEASKLLGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVEAVVENPK 406
Query: 398 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 457
+KQ + +E+E H ILA+NTSTI ++++ + + +G HFF+P H+MPL+E++R
Sbjct: 407 VKQAVLAEVEANVGEHTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIR 466
Query: 458 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 517
E++S + + + + + K P+VV +C GF VNR FPY LVS GVD RID
Sbjct: 467 GEKSSEEAVATTVAYARKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGVDFVRIDK 526
Query: 518 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKANG 575
+ FG P+GP L+D+ G + FPDR + +VD L ++ R G+ NG
Sbjct: 527 VMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSVVDALYEAKRLGQKNG 586
Query: 576 KGLYTYEKGSKPKP----DPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILFP 627
KG Y YE K KP DP+VL PI+ E R V++++I+ ++ P
Sbjct: 587 KGFYAYETDKKGKPKKVNDPAVLDVLKPIVYEQRE------------VSDEDIINWMMIP 634
Query: 628 VVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLY 687
+ E+ R LE+GIV A++ D + G+ FP +RGG + + D++G ++++L
Sbjct: 635 LCLETVRCLEDGIVETAAEADMGLIYGIGFPPFRGGALRYIDSIGVAEFVALADQYAEL- 693
Query: 688 GNFFKPSRFLEERATKG 704
G ++P+ L E A+KG
Sbjct: 694 GALYQPTAKLREMASKG 710
>gi|28870678|ref|NP_793297.1| multifunctional fatty acid oxidation complex subunit alpha
[Pseudomonas syringae pv. tomato str. DC3000]
gi|81730422|sp|Q87ZB2.1|FADB_PSESM RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
RecName: Full=Enoyl-CoA
hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA
isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
RecName: Full=3-hydroxyacyl-CoA dehydrogenase
gi|28853926|gb|AAO56992.1| fatty oxidation complex, alpha subunit [Pseudomonas syringae pv.
tomato str. DC3000]
Length = 721
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 212/688 (30%), Positives = 352/688 (51%), Gaps = 42/688 (6%)
Query: 49 VKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMP-DVSVELVVNLIEDCKKPIVAAVEG 107
VK +++T F G DI F + L+ ++ + + ED P V A+ G
Sbjct: 53 VKGVIVTSGKDVFIVGADITEFVDNFKLPEAELVAGNLEANRIFSDFEDLGVPTVVAING 112
Query: 108 LALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSK 164
+ALGGGLE+ + R+ + ++GLPE+ LG+ PG T RLPR++G AIE + K
Sbjct: 113 IALGGGLEMCLAADYRVISSSARVGLPEVKLGLYPGFGGTVRLPRIIGADNAIEWIASGK 172
Query: 165 SITSEEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGSL 217
++E+ K+G++DA+V E +L++ + D A+R+P + L KL ++
Sbjct: 173 ENSAEDALKVGVVDAIVAPEKLQAAALDLIQRAISGEFDYKAKRQPKLDKL----KLNAI 228
Query: 218 SEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSR 277
+ A + PN P + I++ + G + EA F ++ ++
Sbjct: 229 EQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAAIFGRDKALEIEAAGFVKMAKTSAAQ 288
Query: 278 GLVHVFFA-QRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 336
L+ +F Q K ++ R V++ AV+G G+MG GIA + +++K++
Sbjct: 289 SLIGLFLNDQELKKKAKGYDEVA---RDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKDI 345
Query: 337 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 396
E + G+ + G + +G+LT K AL ++ L Y +F +VD+V+EAV+E+
Sbjct: 346 REEAIQLGLNEASKLLGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVEAVVENP 405
Query: 397 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 456
+KQ + +E+E + ILA+NTSTI ++++ + + +G HFF+P H+MPL+E++
Sbjct: 406 KVKQAVLAEVEANVGENTILASNTSTISISLLAQALKRPENFVGMHFFNPVHMMPLVEVI 465
Query: 457 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 516
R E++S + + + K + K P+VV +C GF VNR FPY LVS GVD RID
Sbjct: 466 RGEKSSEEAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGVDFVRID 525
Query: 517 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKAN 574
+ FG P+GP L+D+ G + FPDR + VD L ++ R G+ N
Sbjct: 526 KVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDALYEANRLGQKN 585
Query: 575 GKGLYTYEKGSKPKP----DPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILF 626
GKG Y YE K KP DP+VL PI+ E R V++++I+ ++
Sbjct: 586 GKGFYVYETDKKGKPKKVNDPAVLDVLKPIVYEQRE------------VSDEDIINWMMI 633
Query: 627 PVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL 686
P+ E+ R LE+GIV A++ D + G+ FP +RGG + + D++G ++++L
Sbjct: 634 PLCLETVRCLEDGIVETAAEADMGLIYGIGFPPFRGGALRYIDSIGVAEFVALADRYAEL 693
Query: 687 YGNFFKPSRFLEERATKGIPLSAPVSSS 714
G ++P+ L E A G SS
Sbjct: 694 -GALYQPTAKLREMAANGQSFFGQASSE 720
>gi|355751174|gb|EHH55429.1| hypothetical protein EGM_04638 [Macaca fascicularis]
Length = 763
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 225/728 (30%), Positives = 365/728 (50%), Gaps = 40/728 (5%)
Query: 5 RVTMEVGNDGVAIITLINPP---VNALAIPIVAGLKDKFEEATSRDDVK-AIVLTGNGGR 60
R + G G + IN P VN L+ + + + E + D ++ A++++ G
Sbjct: 38 RTHINYGVKGDVAVVRINSPNSKVNTLSKELHSEFTEVMNEIWASDQIRSAVLISSKPGC 97
Query: 61 FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
F G DIN+ +V+ + + ++ +E KP+VAA+ G LGGGLELA+ C
Sbjct: 98 FIAGADINMLSACKTLQEVTQLSQ-EAQRILEKLEKSPKPVVAAINGSCLGGGLELAISC 156
Query: 121 HARIAAP--KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLG 175
RIA KT LG+PE+ LG +PG TQRLP++VG+ A++MML ++I ++ K+G
Sbjct: 157 QYRIATKDRKTVLGVPEVLLGALPGAGGTQRLPKMVGVPAALDMMLTGRNIRADRAKKMG 216
Query: 176 LIDAVV-------------TSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEA-- 220
L+D +V T E L +V+ +A +A ++ R+ +KL + +
Sbjct: 217 LVDQLVEPLGPGLKPPEERTMEYLEEVAITFAKGLADKKISPKRNKGLVEKLTAYAMTIP 276
Query: 221 ---REVLKLARLQAKKTAPNM-PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 276
++V K + +K + P +DV++ GI G +G L E++ F ELVM S
Sbjct: 277 FVRQQVYKKVEEKVRKQTKGLYPAPLKIIDVVKTGIEQGSDAGYLSESQKFGELVMTKES 336
Query: 277 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 336
+ L+ ++ Q K G + V+ +A++G GLMG+GIA + + +LK+
Sbjct: 337 KALMGLYHGQVLCKK----NKFGAPQKDVKHLAILGAGLMGAGIAQVSVDKGLKTILKDA 392
Query: 337 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 396
L +G + + + V + LT + ++ L G LDY F+ DMVIEAV E +
Sbjct: 393 TLTGLDRGQQQVFKGLNDKVKKKALTSFERDSIFSNLTGQLDYQGFEKADMVIEAVFEDL 452
Query: 397 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 456
LK ++ E+E P HCI A+NTS + ++ + + +++IG H+FSP M LLEI+
Sbjct: 453 SLKHRVLKEVEAVIPDHCIFASNTSALPISEITAVSKRPEKVIGMHYFSPVDKMQLLEII 512
Query: 457 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 516
TE+TS + VG KV +VV + GF R P ++ GVD ++D
Sbjct: 513 TTEKTSRDTSASAVAVGLKQGKVIIVVKDGPGFYTTRCLAPMMSEVIRILQEGVDPKKLD 572
Query: 517 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRS--FQSPLVDLLLKSGRNGKAN 574
S SFG P+G L+D G V +++ KAF +R L+ ++ G G+ +
Sbjct: 573 SLTTSFGFPVGAATLVDEVGVDVVKHVAEDLRKAFGERCGGGNPELLTQMVSKGFLGRKS 632
Query: 575 GKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCR 634
GKG Y Y++G K K S + I +L P +S ++++I ++ VNE+
Sbjct: 633 GKGFYIYQEGVKRKDLNSDMDSILASLKL----PPKSEVS-SDEDIQFRLVTRFVNEAVM 687
Query: 635 VLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPS 694
L+EGI+ ++ D +V G+ FP GG + D GA + LKK+ YG F P
Sbjct: 688 CLQEGILATPAEGDIGAVFGLGFPPCLGGPFRFVDLYGAQTIVDRLKKYEAAYGKQFTPC 747
Query: 695 RFLEERAT 702
+ L + A
Sbjct: 748 QLLADHAN 755
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.137 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,048,192,296
Number of Sequences: 23463169
Number of extensions: 479648414
Number of successful extensions: 1378568
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 21869
Number of HSP's successfully gapped in prelim test: 10582
Number of HSP's that attempted gapping in prelim test: 1293395
Number of HSP's gapped (non-prelim): 37744
length of query: 721
length of database: 8,064,228,071
effective HSP length: 150
effective length of query: 571
effective length of database: 8,839,720,017
effective search space: 5047480129707
effective search space used: 5047480129707
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 81 (35.8 bits)