BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004972
(721 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2WTB|A Chain A, Arabidopsis Thaliana Multifuctional Protein, Mfp2
Length = 725
Score = 800 bits (2067), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/707 (55%), Positives = 509/707 (71%), Gaps = 8/707 (1%)
Query: 5 RVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGG 64
+ MEVG DGVA+ITLINPPVN+L+ ++ LK +EEA SR+DVKAIV+TG GRFSGG
Sbjct: 8 KTVMEVGGDGVAVITLINPPVNSLSFDVLYNLKSNYEEALSRNDVKAIVITGAKGRFSGG 67
Query: 65 FDINVFQKVHGAGDVSLMPD---VSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCH 121
FDI+ F ++ G+V P +S++++ +L+E +KP M CH
Sbjct: 68 FDISGFGEMQ-KGNVK-EPKAGYISIDIITDLLEAARKPSVAAIDGLALGGGLELAMACH 125
Query: 122 ARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
ARI+AP QLGLPEL LGVIPG TQRLPRLVGL+KA+EM+L SK + +EEG LGLID
Sbjct: 126 ARISAPAAQLGLPELQLGVIPGFGGTQRLPRLVGLTKALEMILTSKPVKAEEGHSLGLID 185
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 238
AVV EL+ +R WALDI RRKPW+ S+ +TDKL L EARE+L A+ Q K APNM
Sbjct: 186 AVVPPAELVTTARRWALDIVGRRKPWVSSVSKTDKLPPLGEAREILTFAKAQTLKRAPNM 245
Query: 239 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDI 298
CLD IE GIV G +G+ KEA+V ++V LDT++GL+HVFF+QR T+KVP VTD
Sbjct: 246 KHPLMCLDAIEVGIVSGPRAGLEKEAEVASQVVKLDTTKGLIHVFFSQRGTAKVPGVTDR 305
Query: 299 GLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTR 358
GL PR ++KVA+IGGGLMGSGIATA IL+N V+LKEVN ++L GI ++AN++ V +
Sbjct: 306 GLVPRKIKKVAIIGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVKANLQSRVRK 365
Query: 359 GKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 418
G ++Q+K + +LKG LDY F+DVDMVIEAVIE++ LKQ+IF++LEK CP HCILA+
Sbjct: 366 GSMSQEKFEKTMSLLKGSLDYESFRDVDMVIEAVIENISLKQQIFADLEKYCPQHCILAS 425
Query: 419 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXX 478
NTSTIDLN +GE+T SQDRI+GAHFFSPAH+MPLLEIVRT TSAQVI+DL+
Sbjct: 426 NTSTIDLNKIGERTKSQDRIVGAHFFSPAHIMPLLEIVRTNHTSAQVIVDLLDVGKKIKK 485
Query: 479 XXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYG 538
NCTGFAVNR FFPY+Q+A LV G D + ID AI FG+P+GPF+L DL G+G
Sbjct: 486 TPVVVGNCTGFAVNRMFFPYTQAAMFLVECGADPYLIDRAISKFGMPMGPFRLCDLVGFG 545
Query: 539 VAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIE 598
VA AT+ +F + F +R+++S ++ L+ + R G+A KG Y Y+ K KPDP + IE
Sbjct: 546 VAIATATQFIENFSERTYKSMIIPLMQEDKRAGEATRKGFYLYDDKRKAKPDPELKKYIE 605
Query: 599 ECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFP 658
+ R +S + K +++EK+I+EM FPVVNE+CRV EGI V+A+DLD A ++GM FP
Sbjct: 606 KARSISGVKLDPKLANLSEKDIIEMTFFPVVNEACRVFAEGIAVKAADLDIAGIMGMGFP 665
Query: 659 SYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGI 705
YRGGI+FWAD++G+ Y+Y+ L +WS+ YG FFKP FL ER +KG+
Sbjct: 666 PYRGGIMFWADSIGSKYIYSRLDEWSKAYGEFFKPCAFLAERGSKGV 712
>pdb|2X58|A Chain A, The Crystal Structure Of Mfe1 Liganded With Coa
pdb|2X58|B Chain B, The Crystal Structure Of Mfe1 Liganded With Coa
Length = 727
Score = 322 bits (826), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 223/718 (31%), Positives = 359/718 (50%), Gaps = 52/718 (7%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A+I L NPPVNA++ ++ +++ ++A S VKAIV+ G G F G DI+ F
Sbjct: 16 LAMIRLCNPPVNAVSPTVIREVRNGLQKAGSDHTVKAIVICGANGNFCAGADIHGFS--- 72
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQLGLP 134
+ P +++ +V+ I+ +KP+ +GCH RIA K ++GLP
Sbjct: 73 -----AFTPGLALGSLVDEIQRYQKPVLAAIQGVALGGGLELALGCHYRIANAKARVGLP 127
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS---EELLK 188
E+TLG++PG TQ LPR+VG+ A++++ K ++++E +LG++DAVV S EE +K
Sbjct: 128 EVTLGILPGARGTQLLPRVVGVPVALDLITSGKYLSADEALRLGILDAVVKSDPVEEAIK 187
Query: 189 VS-RLWALDIAARR---KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 244
+ ++ I RR KP + SL V A + +K P + + C
Sbjct: 188 FAQKIIDKPIEPRRIFNKP----------VPSLPNMDSVFAEAIAKVRKQYPGVLAPETC 237
Query: 245 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK--- 301
+ I+ + H G+ +E K+F L ++ L + FFA+++ +K + K
Sbjct: 238 VRSIQASVKHPYEVGIKEEEKLFMYLRASGQAKALQYAFFAEKSANKWSTPSGASWKTAS 297
Query: 302 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 361
+ V V V+G G MG GIA + I VV E + + L K I + +R
Sbjct: 298 AQPVSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAH- 356
Query: 362 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 421
Q+ +A L+ E VD+V+EAV E + LK+K+F+EL C P L TNTS
Sbjct: 357 -QNGQASAKPKLRFSSSTKELSTVDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTS 415
Query: 422 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXX 481
++++ + T +IG HFFSPAHVM LLE++ + +S I +M+
Sbjct: 416 ALNVDDIASSTDRPQLVIGTHFFSPAHVMRLLEVIPSRYSSPTTIATVMSLSKKIGKIGV 475
Query: 482 XXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVA- 540
NC GF NR PY L+ G +D + FG +GPF++ DLAG V
Sbjct: 476 VVGNCYGFVGNRMLAPYYNQGFFLLEEGSKPEDVDGVLEEFGFKMGPFRVSDLAGLDVGW 535
Query: 541 ------AATSKEFDKAFPDR----SFQSPLVDLLLKSGRNGKANGKGLYTYEK--GSKPK 588
T P R S SPL D+L ++GR G+ GKG Y Y+K G K
Sbjct: 536 KIRKGQGLTGPSLPPGTPVRKRGNSRYSPLGDMLCEAGRFGQKTGKGWYQYDKPLGRIHK 595
Query: 589 PDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLD 648
PDP + + + R + +I + +++++EI+E L+ ++NE+ R+LEEG+ R +D
Sbjct: 596 PDPWLSTFLSQYREVHHI----EQRTISKEEILERCLYSLINEAFRILEEGMAARPEHID 651
Query: 649 DASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF--FKPSRFLEERATKG 704
+ G +P ++GG +F+A +VG V L+K+ + + +PS +L +G
Sbjct: 652 VIYLHGYGWPRHKGGPMFYAASVGLPTVLEKLQKYYRQNPDIPQLEPSDYLRRLVAQG 709
>pdb|3ZW8|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) In Apo Form
pdb|3ZW8|B Chain B, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) In Apo Form
pdb|3ZW9|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
(2s,3s)-3-hydroxy-2- Methylbutanoyl-coa
pdb|3ZW9|B Chain B, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
(2s,3s)-3-hydroxy-2- Methylbutanoyl-coa
pdb|3ZWA|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
3s-hydroxy-hexanoyl-coa
pdb|3ZWA|B Chain B, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
3s-hydroxy-hexanoyl-coa
pdb|3ZWC|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
3s-hydroxy-decanoyl-coa
pdb|3ZWC|B Chain B, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
3s-hydroxy-decanoyl-coa
Length = 742
Score = 322 bits (824), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 223/718 (31%), Positives = 359/718 (50%), Gaps = 52/718 (7%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A+I L NPPVNA++ ++ +++ ++A S VKAIV+ G G F G DI+ F
Sbjct: 31 LAMIRLCNPPVNAVSPTVIREVRNGLQKAGSDHTVKAIVICGANGNFCAGADIHGFS--- 87
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQLGLP 134
+ P +++ +V+ I+ +KP+ +GCH RIA K ++GLP
Sbjct: 88 -----AFTPGLALGSLVDEIQRYQKPVLAAIQGVALGGGLELALGCHYRIANAKARVGLP 142
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS---EELLK 188
E+TLG++PG TQ LPR+VG+ A++++ K ++++E +LG++DAVV S EE +K
Sbjct: 143 EVTLGILPGARGTQLLPRVVGVPVALDLITSGKYLSADEALRLGILDAVVKSDPVEEAIK 202
Query: 189 VS-RLWALDIAARR---KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 244
+ ++ I RR KP + SL V A + +K P + + C
Sbjct: 203 FAQKIIDKPIEPRRIFNKP----------VPSLPNMDSVFAEAIAKVRKQYPGVLAPETC 252
Query: 245 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK--- 301
+ I+ + H G+ +E K+F L ++ L + FFA+++ +K + K
Sbjct: 253 VRSIQASVKHPYEVGIKEEEKLFMYLRASGQAKALQYAFFAEKSANKWSTPSGASWKTAS 312
Query: 302 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 361
+ V V V+G G MG GIA + I VV E + + L K I + +R
Sbjct: 313 AQPVSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAH- 371
Query: 362 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 421
Q+ +A L+ E VD+V+EAV E + LK+K+F+EL C P L TNTS
Sbjct: 372 -QNGQASAKPKLRFSSSTKELSTVDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTS 430
Query: 422 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXX 481
++++ + T +IG HFFSPAHVM LLE++ + +S I +M+
Sbjct: 431 ALNVDDIASSTDRPQLVIGTHFFSPAHVMRLLEVIPSRYSSPTTIATVMSLSKKIGKIGV 490
Query: 482 XXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVA- 540
NC GF NR PY L+ G +D + FG +GPF++ DLAG V
Sbjct: 491 VVGNCYGFVGNRMLAPYYNQGFFLLEEGSKPEDVDGVLEEFGFKMGPFRVSDLAGLDVGW 550
Query: 541 ------AATSKEFDKAFPDR----SFQSPLVDLLLKSGRNGKANGKGLYTYEK--GSKPK 588
T P R S SPL D+L ++GR G+ GKG Y Y+K G K
Sbjct: 551 KIRKGQGLTGPSLPPGTPVRKRGNSRYSPLGDMLCEAGRFGQKTGKGWYQYDKPLGRIHK 610
Query: 589 PDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLD 648
PDP + + + R + +I + +++++EI+E L+ ++NE+ R+LEEG+ R +D
Sbjct: 611 PDPWLSTFLSQYREVHHI----EQRTISKEEILERCLYSLINEAFRILEEGMAARPEHID 666
Query: 649 DASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF--FKPSRFLEERATKG 704
+ G +P ++GG +F+A +VG V L+K+ + + +PS +L +G
Sbjct: 667 VIYLHGYGWPRHKGGPMFYAASVGLPTVLEKLQKYYRQNPDIPQLEPSDYLRRLVAQG 724
>pdb|3ZWB|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
2trans-hexenoyl-coa
pdb|3ZWB|B Chain B, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
2trans-hexenoyl-coa
Length = 742
Score = 319 bits (817), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 222/718 (30%), Positives = 358/718 (49%), Gaps = 52/718 (7%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A+I L NPPVNA++ ++ +++ ++A S VKAIV+ G G F G DI+ F
Sbjct: 31 LAMIRLCNPPVNAVSPTVIREVRNGLQKAGSDHTVKAIVICGANGNFCAGADIHGFS--- 87
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQLGLP 134
+ P +++ +V+ I+ +KP+ +GCH RIA K ++GLP
Sbjct: 88 -----AFTPGLALGSLVDEIQRYQKPVLAAIQGVALGGGLELALGCHYRIANAKARVGLP 142
Query: 135 ELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS---EELLK 188
+TLG++PG TQ LPR+VG+ A++++ K ++++E +LG++DAVV S EE +K
Sbjct: 143 AVTLGILPGARGTQLLPRVVGVPVALDLITSGKYLSADEALRLGILDAVVKSDPVEEAIK 202
Query: 189 VS-RLWALDIAARR---KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 244
+ ++ I RR KP + SL V A + +K P + + C
Sbjct: 203 FAQKIIDKPIEPRRIFNKP----------VPSLPNMDSVFAEAIAKVRKQYPGVLAPETC 252
Query: 245 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK--- 301
+ I+ + H G+ +E K+F L ++ L + FFA+++ +K + K
Sbjct: 253 VRSIQASVKHPYEVGIKEEEKLFMYLRASGQAKALQYAFFAEKSANKWSTPSGASWKTAS 312
Query: 302 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 361
+ V V V+G G MG GIA + I VV E + + L K I + +R
Sbjct: 313 AQPVSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAH- 371
Query: 362 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 421
Q+ +A L+ E VD+V+EAV E + LK+K+F+EL C P L TNTS
Sbjct: 372 -QNGQASAKPKLRFSSSTKELSTVDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTS 430
Query: 422 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXX 481
++++ + T +IG HFFSPAHVM LLE++ + +S I +M+
Sbjct: 431 ALNVDDIASSTDRPQLVIGTHFFSPAHVMRLLEVIPSRYSSPTTIATVMSLSKKIGKIGV 490
Query: 482 XXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVA- 540
NC GF NR PY L+ G +D + FG +GPF++ DLAG V
Sbjct: 491 VVGNCYGFVGNRMLAPYYNQGFFLLEEGSKPEDVDGVLEEFGFKMGPFRVSDLAGLDVGW 550
Query: 541 ------AATSKEFDKAFPDR----SFQSPLVDLLLKSGRNGKANGKGLYTYEK--GSKPK 588
T P R S SPL D+L ++GR G+ GKG Y Y+K G K
Sbjct: 551 KIRKGQGLTGPSLPPGTPVRKRGNSRYSPLGDMLCEAGRFGQKTGKGWYQYDKPLGRIHK 610
Query: 589 PDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLD 648
PDP + + + R + +I + +++++EI+E L+ ++NE+ R+LEEG+ R +D
Sbjct: 611 PDPWLSTFLSQYREVHHI----EQRTISKEEILERCLYSLINEAFRILEEGMAARPEHID 666
Query: 649 DASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF--FKPSRFLEERATKG 704
+ G +P ++GG +F+A +VG V L+K+ + + +PS +L +G
Sbjct: 667 VIYLHGYGWPRHKGGPMFYAASVGLPTVLEKLQKYYRQNPDIPQLEPSDYLRRLVAQG 724
>pdb|1WDK|A Chain A, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form I (Native2)
pdb|1WDK|B Chain B, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form I (Native2)
pdb|1WDL|A Chain A, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form Ii (Native4)
pdb|1WDL|B Chain B, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form Ii (Native4)
pdb|1WDM|A Chain A, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form I (Native3)
pdb|1WDM|B Chain B, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form I (Native3)
pdb|2D3T|A Chain A, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form V
pdb|2D3T|B Chain B, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form V
Length = 715
Score = 278 bits (710), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 200/677 (29%), Positives = 324/677 (47%), Gaps = 40/677 (5%)
Query: 49 VKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMP-DVSVELVVNLIEDCKKPIXXXXXX 107
VK ++++ F G DI F + D L+ ++ + + ED P
Sbjct: 53 VKGVIVSSGKDVFIVGADITEFVENFKLPDAELIAGNLEANKIFSDFEDLNVPTVAAING 112
Query: 108 XXXXXXXXXXMGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSK 164
+ R+ A ++GLPE+ LG+ PG T RLPRL+G+ A+E + K
Sbjct: 113 IALGGGLEMCLAADFRVMADSAKIGLPEVKLGIYPGFGGTVRLPRLIGVDNAVEWIASGK 172
Query: 165 SITSEEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGSL 217
+E+ K+ +DAVVT++ +L+K + LD A+R+P + L KL ++
Sbjct: 173 ENRAEDALKVSAVDAVVTADKLGAAALDLIKRAISGELDYKAKRQPKLEKL----KLNAI 228
Query: 218 SEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSR 277
+ A + PN P + I++ G + EA F +L S
Sbjct: 229 EQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFAKLAKTSASN 288
Query: 278 GLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 337
L+ +F + K V D K V++ AV+G G+MG GIA +++K++N
Sbjct: 289 CLIGLFLNDQELKKKAKVYDKIAKD--VKQAAVLGAGIMGGGIAYQSASKGTPILMKDIN 346
Query: 338 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 397
+ +G+ + G V +G++T K L ++ L Y +F +VD+V+EAV+E+
Sbjct: 347 EHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSYGDFGNVDLVVEAVVENPK 406
Query: 398 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 457
+KQ + +E+E ILA+NTSTI ++++ + + +G HFF+P H+MPL+E++R
Sbjct: 407 VKQAVLAEVENHVREDAILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIR 466
Query: 458 TERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 517
E++S + + +C GF VNR FPY LVS GVD RID
Sbjct: 467 GEKSSDLAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDK 526
Query: 518 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKANG 575
+ FG P+GP L+D+ G + FPDR + +D L ++ R G+ NG
Sbjct: 527 VMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYEAKRLGQKNG 586
Query: 576 KGLYTYEKGSKPKP----DPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILFP 627
KG Y YE K K D SVL PI+ E R VT+++I+ ++ P
Sbjct: 587 KGFYAYEADKKGKQKKLVDSSVLEVLKPIVYEQR------------DVTDEDIINWMMIP 634
Query: 628 VVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLY 687
+ E+ R LE+GIV A++ D V G+ FP +RGG + + D++G ++++L
Sbjct: 635 LCLETVRCLEDGIVETAAEADMGLVYGIGFPLFRGGALRYIDSIGVAEFVALADQYAEL- 693
Query: 688 GNFFKPSRFLEERATKG 704
G + P+ L E A G
Sbjct: 694 GALYHPTAKLREMAKNG 710
>pdb|1ZCJ|A Chain A, Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenase
Length = 463
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 140/447 (31%), Positives = 220/447 (49%), Gaps = 24/447 (5%)
Query: 276 SRGLVHVFFAQRATSKVPNVTDIGLK---PRGVRKVAVIGGGLMGSGIATAHILNNIYVV 332
++ L + FFA+++ +K + K + V V V+G G MG GIA + I VV
Sbjct: 5 AKALQYAFFAEKSANKWSTPSGASWKTASAQPVSSVGVLGLGTMGRGIAISFARVGISVV 64
Query: 333 LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAV 392
E + + L K I + +R Q+ +A L+ E VD+V+EAV
Sbjct: 65 AVESDPKQLDAAKKIITFTLEKEASRAH--QNGQASAKPKLRFSSSTKELSTVDLVVEAV 122
Query: 393 IESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPL 452
E + LK+K+F+EL C P L TNTS ++++ + T +IG HFFSPAHVM L
Sbjct: 123 FEDMNLKKKVFAELSALCKPGAFLCTNTSALNVDDIASSTDRPQLVIGTHFFSPAHVMRL 182
Query: 453 LEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDV 512
LE++ + +S I +M+ NC GF NR PY L+ G
Sbjct: 183 LEVIPSRYSSPTTIATVMSLSKKIGKIGVVVGNCYGFVGNRMLAPYYNQGFFLLEEGSKP 242
Query: 513 FRIDSAIRSFGLPIGPFQLLDLAGYGVA-------AATSKEFDKAFPDR----SFQSPLV 561
+D + FG +GPF++ DLAG V T P R S SPL
Sbjct: 243 EDVDGVLEEFGFKMGPFRVSDLAGLDVGWKIRKGQGLTGPSLPPGTPVRKRGNSRYSPLG 302
Query: 562 DLLLKSGRNGKANGKGLYTYEK--GSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKE 619
D+L ++GR G+ GKG Y Y+K G KPDP + + + R + +I + +++++E
Sbjct: 303 DMLCEAGRFGQKTGKGWYQYDKPLGRIHKPDPWLSTFLSQYREVHHI----EQRTISKEE 358
Query: 620 IVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTS 679
I+E L+ ++NE+ R+LEEG+ R +D + G +P ++GG +F+A +VG V
Sbjct: 359 ILERCLYSLINEAFRILEEGMAARPEHIDVIYLHGYGWPRHKGGPMFYAASVGLPTVLEK 418
Query: 680 LKKWSQLYGNF--FKPSRFLEERATKG 704
L+K+ + + +PS +L +G
Sbjct: 419 LQKYYRQNPDIPQLEPSDYLRRLVAQG 445
>pdb|3K6J|A Chain A, Crystal Structure Of The Dehydrogenase Part Of
Multifuctional Enzyme 1 From C.Elegans
Length = 460
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 111/383 (28%), Positives = 184/383 (48%), Gaps = 13/383 (3%)
Query: 305 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 364
V VA+IGGG MG +A L I L N + + ++ + A + +
Sbjct: 54 VNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIE 113
Query: 365 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 424
K N LK+ D+ + + D+++E+VIE + LK+++F+ LE C CI TNTS++D
Sbjct: 114 KINANLKITS---DFHKLSNCDLIVESVIEDMKLKKELFANLENICKSTCIFGTNTSSLD 170
Query: 425 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXX 484
LN + ++G HFF+PA+V+ L+EI+ TS+Q I
Sbjct: 171 LNEISSVLRDPSNLVGIHFFNPANVIRLVEIIYGSHTSSQAIATAFQACESIKKLPVLVG 230
Query: 485 NCTGFAVNRAFFPY-SQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAAT 543
NC F NR Y QS +L+ G +ID I +FG +GP + D+ G+ V
Sbjct: 231 NCKSFVFNRLLHVYFDQSQKLMYEYGYLPHQIDKIITNFGFLMGPMTVADMNGFDVMEKL 290
Query: 544 SKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRL 603
KE + P+ P+ + + R G+ KG Y Y+ ++ K + + + I RR+
Sbjct: 291 KKE-NGLEPN-----PIEKEMWRLKRYGRKTNKGFYKYDDKTQRKENDTEMEQI--IRRV 342
Query: 604 SNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGG 663
S I + +++++ +L+P VNE R +EEG++ S +D +LG +P + GG
Sbjct: 343 SQNAKSNIQI-INDQDVINFMLYPTVNEGYRCIEEGVISNESLIDIMFILGFGWPIHSGG 401
Query: 664 IVFWADAVGANYVYTSLKKWSQL 686
+ + G + + L WS L
Sbjct: 402 PMRFGKTEGLDKIANMLVHWSSL 424
>pdb|3MOG|A Chain A, Crystal Structure Of 3-Hydroxybutyryl-Coa Dehydrogenase
From Escherichia Coli K12 Substr. Mg1655
pdb|3MOG|B Chain B, Crystal Structure Of 3-Hydroxybutyryl-Coa Dehydrogenase
From Escherichia Coli K12 Substr. Mg1655
pdb|3MOG|C Chain C, Crystal Structure Of 3-Hydroxybutyryl-Coa Dehydrogenase
From Escherichia Coli K12 Substr. Mg1655
Length = 483
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 103/281 (36%), Positives = 150/281 (53%), Gaps = 4/281 (1%)
Query: 305 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 364
V+ VAVIG G MG+GIA + V+L ++++E L + I I A + VTRGKLT +
Sbjct: 5 VQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAE 64
Query: 365 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 424
LK L V D D+VIEA E + +K+ +F++L + CPP +L TNTS+I
Sbjct: 65 TCERTLKRLIPVTDIHALAAADLVIEAASERLEVKKALFAQLAEVCPPQTLLTTNTSSIS 124
Query: 425 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXX 484
+ + + + +R+ G HFF+PA VM L+E+V T+A+V+ L
Sbjct: 125 ITAIAAEIKNPERVAGLHFFNPAPVMKLVEVVSGLATAAEVVEQLCELTLSWGKQPVRCH 184
Query: 485 NCTGFAVNRAFFP-YSQSARLLVSLGVDVFRIDSAIRS-FGLPIGPFQLLDLAGYGVA-A 541
+ GF VNR P YS++ R L ID+A+R G P+GP +L DL G V A
Sbjct: 185 STPGFIVNRVARPYYSEAWRALEEQVAAPEVIDAALRDGAGFPMGPLELTDLIGQDVNFA 244
Query: 542 ATSKEFDKAFPDRSFQSPLVDL-LLKSGRNGKANGKGLYTY 581
T F+ + +R F LV L+ GR GK +G G+Y +
Sbjct: 245 VTCSVFNAFWQERRFLPSLVQQELVIGGRLGKKSGLGVYDW 285
>pdb|3HAD|A Chain A, Biochemical Characterization And Structure Determination
Of Human Heart Short Chain L-3-Hydroxyacyl Coa
Dehydrogenase Provide Insight Into Catalytic Mechanism
pdb|3HAD|B Chain B, Biochemical Characterization And Structure Determination
Of Human Heart Short Chain L-3-Hydroxyacyl Coa
Dehydrogenase Provide Insight Into Catalytic Mechanism
Length = 308
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/290 (32%), Positives = 142/290 (48%), Gaps = 14/290 (4%)
Query: 305 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 364
V+ V VIGGGLMG+GIA VVL + + L K K IE ++R + +
Sbjct: 15 VKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENP 74
Query: 365 KANNAL--KMLKGVLDYSEFKDV----DMVIEAVIESVPLKQKIFSELEKACPPHCILAT 418
KA + K L + ++ V D+V+EA++E++ +K ++F L+K H I A+
Sbjct: 75 KAGDEFVEKTLSTIATSTDAASVVHSTDLVVEAIVENLKVKNELFKRLDKRAAEHTIFAS 134
Query: 419 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXX 478
NTS++ + + T+ QDR G HFF+P VM L+E+++T TS + L+
Sbjct: 135 NTSSLQITSIANATTRQDRFAGLHFFNPVPVMKLVEVIKTPMTSQKTFESLVDFSKALGK 194
Query: 479 XXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFR--IDSAIR-SFGLPIGPFQLLDLA 535
+ GF VNR PY A L G D + ID+A++ G P+GPF+LLD
Sbjct: 195 HPVSCKDTPGFIVNRLLVPYLMEAIRLYERG-DASKEDIDTAMKLGAGYPMGPFELLDYV 253
Query: 536 GYGVAAATS---KEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYE 582
G E D P SP ++ L+ + GK G+G Y Y+
Sbjct: 254 GLDTTKFIVDGWHEMDAENPLHQ-PSPSLNKLVAENKFGKKTGEGFYKYK 302
>pdb|1F0Y|A Chain A, L-3-Hydroxyacyl-Coa Dehydrogenase Complexed With
Acetoacetyl-Coa And Nad+
pdb|1F0Y|B Chain B, L-3-Hydroxyacyl-Coa Dehydrogenase Complexed With
Acetoacetyl-Coa And Nad+
Length = 302
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 94/290 (32%), Positives = 142/290 (48%), Gaps = 14/290 (4%)
Query: 305 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 364
V+ V VIGGGLMG+GIA VVL + + L K K IE ++R + +
Sbjct: 15 VKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENP 74
Query: 365 KANNAL--KMLKGVLDYSEFKDV----DMVIEAVIESVPLKQKIFSELEKACPPHCILAT 418
KA + K L + ++ V D+V+EA++E++ +K ++F L+K H I A+
Sbjct: 75 KAGDEFVEKTLSTIATSTDAASVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFAS 134
Query: 419 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXX 478
NTS++ + + T+ QDR G HFF+P VM L+E+++T TS + L+
Sbjct: 135 NTSSLQITSIANATTRQDRFAGLHFFNPVPVMKLVEVIKTPMTSQKTFESLVDFSKALGK 194
Query: 479 XXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFR--IDSAIR-SFGLPIGPFQLLDLA 535
+ GF VNR PY A L G D + ID+A++ G P+GPF+LLD
Sbjct: 195 HPVSCKDTPGFIVNRLLVPYLMEAIRLYERG-DASKEDIDTAMKLGAGYPMGPFELLDYV 253
Query: 536 GYGVAAATS---KEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYE 582
G E D P SP ++ L+ + GK G+G Y Y+
Sbjct: 254 GLDTTKFIVDGWHEMDAENPLHQ-PSPSLNKLVAENKFGKKTGEGFYKYK 302
>pdb|3HDH|A Chain A, Pig Heart Short Chain L-3-Hydroxyacyl Coa Dehydrogenase
Revisited: Sequence Analysis And Crystal Structure
Determination
pdb|3HDH|B Chain B, Pig Heart Short Chain L-3-Hydroxyacyl Coa Dehydrogenase
Revisited: Sequence Analysis And Crystal Structure
Determination
pdb|3HDH|C Chain C, Pig Heart Short Chain L-3-Hydroxyacyl Coa Dehydrogenase
Revisited: Sequence Analysis And Crystal Structure
Determination
Length = 302
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 94/290 (32%), Positives = 144/290 (49%), Gaps = 14/290 (4%)
Query: 305 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 364
V+ V VIGGGLMG+GIA VVL + + L K K IE ++R + +
Sbjct: 15 VKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENP 74
Query: 365 KANNAL--KMLKGVLDYSEFKDV----DMVIEAVIESVPLKQKIFSELEKACPPHCILAT 418
KA + K L + ++ V D+V+EA++E++ +K ++F L+K H I A+
Sbjct: 75 KAGDEFVEKTLSSISTSTDAASVVHSTDLVVEAIVENLKVKSELFKRLDKFAAEHTIFAS 134
Query: 419 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXX 478
NTS++ + + T+ QDR G HFF+P +M L+E+V+T TS + + L+
Sbjct: 135 NTSSLQITSLANATTRQDRFAGLHFFNPVPLMKLVEVVKTPMTSQKTLESLVDFSKTLGK 194
Query: 479 XXXXXXNCTGFAVNRAFFPY-SQSARLLVSLGVDVFRIDSAIR-SFGLPIGPFQLLDLAG 536
+ GF VNR PY ++ RL ID+A++ G P+GPF+LLD G
Sbjct: 195 HPVSCKDTPGFIVNRLLVPYLIEAVRLYERGDASKEDIDTAMKLGAGYPMGPFELLDYVG 254
Query: 537 YGVAAAT---SKEFDKAFPDRSFQ-SPLVDLLLKSGRNGKANGKGLYTYE 582
E D P FQ SP ++ L+ + GK G+G Y Y+
Sbjct: 255 LDTTKFIIDGWHEMDSQNP--LFQPSPAMNKLVAENKFGKKTGEGFYKYK 302
>pdb|1F12|A Chain A, L-3-Hydroxyacyl-Coa Dehydrogenase Complexed With 3-
Hydroxybutyryl-Coa
pdb|1F12|B Chain B, L-3-Hydroxyacyl-Coa Dehydrogenase Complexed With 3-
Hydroxybutyryl-Coa
pdb|1F14|A Chain A, L-3-Hydroxyacyl-Coa Dehydrogenase (Apo)
pdb|1F14|B Chain B, L-3-Hydroxyacyl-Coa Dehydrogenase (Apo)
pdb|1F17|A Chain A, L-3-Hydroxyacyl-Coa Dehydrogenase Complexed With Nadh
pdb|1F17|B Chain B, L-3-Hydroxyacyl-Coa Dehydrogenase Complexed With Nadh
Length = 310
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 94/290 (32%), Positives = 142/290 (48%), Gaps = 14/290 (4%)
Query: 305 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 364
V+ V VIGGGLMG+GIA VVL + + L K K IE ++R + +
Sbjct: 15 VKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENP 74
Query: 365 KANNAL--KMLKGVLDYSEFKDV----DMVIEAVIESVPLKQKIFSELEKACPPHCILAT 418
KA + K L + ++ V D+V+EA++E++ +K ++F L+K H I A+
Sbjct: 75 KAGDECVEKTLSTIATSTDAASVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFAS 134
Query: 419 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXX 478
NTS++ + + T+ QDR G HFF+P VM L+E+++T TS + L+
Sbjct: 135 NTSSLQITSIANATTRQDRFAGLHFFNPVPVMKLVEVIKTPMTSQKTFESLVDFSKALGK 194
Query: 479 XXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFR--IDSAIR-SFGLPIGPFQLLDLA 535
+ GF VNR PY A L G D + ID+A++ G P+GPF+LLD
Sbjct: 195 HPVSCKDTPGFIVNRLLVPYLMEAIRLYERG-DASKEDIDTAMKLGAGYPMGPFELLDYV 253
Query: 536 GYGVAAATS---KEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYE 582
G E D P SP ++ L+ + GK G+G Y Y+
Sbjct: 254 GLDTTKFIVDGWHEMDAENPLHQ-PSPSLNKLVAENKFGKKTGEGFYKYK 302
>pdb|1LSJ|A Chain A, Crystal Structure Of The E110q Mutant Of L-3-hydroxyacyl-
Coa Dehydrogenase In Complex With Nad
pdb|1LSJ|B Chain B, Crystal Structure Of The E110q Mutant Of L-3-hydroxyacyl-
Coa Dehydrogenase In Complex With Nad
Length = 302
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 142/290 (48%), Gaps = 14/290 (4%)
Query: 305 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 364
V+ V VIGGGLMG+GIA VVL + + L K K IE ++R + +
Sbjct: 15 VKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENP 74
Query: 365 KANNAL--KMLKGVLDYSEFKDV----DMVIEAVIESVPLKQKIFSELEKACPPHCILAT 418
KA + K L + ++ V D+V+EA+++++ +K ++F L+K H I A+
Sbjct: 75 KAGDEFVEKTLSTIATSTDAASVVHSTDLVVEAIVQNLKVKNELFKRLDKFAAEHTIFAS 134
Query: 419 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXX 478
NTS++ + + T+ QDR G HFF+P VM L+E+++T TS + L+
Sbjct: 135 NTSSLQITSIANATTRQDRFAGLHFFNPVPVMKLVEVIKTPMTSQKTFESLVDFSKALGK 194
Query: 479 XXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFR--IDSAIR-SFGLPIGPFQLLDLA 535
+ GF VNR PY A L G D + ID+A++ G P+GPF+LLD
Sbjct: 195 HPVSCKDTPGFIVNRLLVPYLMEAIRLYERG-DASKEDIDTAMKLGAGYPMGPFELLDYV 253
Query: 536 GYGVAAATS---KEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYE 582
G E D P SP ++ L+ + GK G+G Y Y+
Sbjct: 254 GLDTTKFIVDGWHEMDAENPLHQ-PSPSLNKLVAENKFGKKTGEGFYKYK 302
>pdb|1IL0|A Chain A, X-Ray Crystal Structure Of The E170q Mutant Of Human L-3-
Hydroxyacyl-Coa Dehydrogenase
pdb|1IL0|B Chain B, X-Ray Crystal Structure Of The E170q Mutant Of Human L-3-
Hydroxyacyl-Coa Dehydrogenase
Length = 302
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 142/290 (48%), Gaps = 14/290 (4%)
Query: 305 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 364
V+ V VIGGGLMG+GIA VVL + + L K K IE ++R + +
Sbjct: 15 VKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENP 74
Query: 365 KANNAL--KMLKGVLDYSEFKDV----DMVIEAVIESVPLKQKIFSELEKACPPHCILAT 418
KA + K L + ++ V D+V+EA++E++ +K ++F L+K H I A+
Sbjct: 75 KAGDEFVEKTLSTIATSTDAASVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFAS 134
Query: 419 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXX 478
NTS++ + + T+ QDR G HFF+P VM L+++++T TS + L+
Sbjct: 135 NTSSLQITSIANATTRQDRFAGLHFFNPVPVMKLVQVIKTPMTSQKTFESLVDFSKALGK 194
Query: 479 XXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFR--IDSAIR-SFGLPIGPFQLLDLA 535
+ GF VNR PY A L G D + ID+A++ G P+GPF+LLD
Sbjct: 195 HPVSCKDTPGFIVNRLLVPYLMEAIRLYERG-DASKEDIDTAMKLGAGYPMGPFELLDYV 253
Query: 536 GYGVAAATS---KEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYE 582
G E D P SP ++ L+ + GK G+G Y Y+
Sbjct: 254 GLDTTKFIVDGWHEMDAENPLHQ-PSPSLNKLVAENKFGKKTGEGFYKYK 302
>pdb|1LSO|A Chain A, Crystal Structure Of The S137a Mutant Of L-3-Hydroxyacyl-
Coa Dehydrogenase In Complex With Nad
pdb|1LSO|B Chain B, Crystal Structure Of The S137a Mutant Of L-3-Hydroxyacyl-
Coa Dehydrogenase In Complex With Nad
Length = 302
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 142/290 (48%), Gaps = 14/290 (4%)
Query: 305 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 364
V+ V VIGGGLMG+GIA VVL + + L K K IE ++R + +
Sbjct: 15 VKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENP 74
Query: 365 KANNAL--KMLKGVLDYSEFKDV----DMVIEAVIESVPLKQKIFSELEKACPPHCILAT 418
KA + K L + ++ V D+V+EA++E++ +K ++F L+K H I A+
Sbjct: 75 KAGDEFVEKTLSTIATSTDAASVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFAS 134
Query: 419 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXX 478
NT+++ + + T+ QDR G HFF+P VM L+E+++T TS + L+
Sbjct: 135 NTASLQITSIANATTRQDRFAGLHFFNPVPVMKLVEVIKTPMTSQKTFESLVDFSKALGK 194
Query: 479 XXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFR--IDSAIR-SFGLPIGPFQLLDLA 535
+ GF VNR PY A L G D + ID+A++ G P+GPF+LLD
Sbjct: 195 HPVSCKDTPGFIVNRLLVPYLMEAIRLYERG-DASKEDIDTAMKLGAGYPMGPFELLDYV 253
Query: 536 GYGVAAATS---KEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYE 582
G E D P SP ++ L+ + GK G+G Y Y+
Sbjct: 254 GLDTTKFIVDGWHEMDAENPLHQ-PSPSLNKLVAENKFGKKTGEGFYKYK 302
>pdb|1M75|A Chain A, Crystal Structure Of The N208s Mutant Of L-3-Hydroxyacyl-
Coa Dehydrogenase In Complex With Nad And
Acetoacetyl-Coa
pdb|1M75|B Chain B, Crystal Structure Of The N208s Mutant Of L-3-Hydroxyacyl-
Coa Dehydrogenase In Complex With Nad And
Acetoacetyl-Coa
Length = 302
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 142/290 (48%), Gaps = 14/290 (4%)
Query: 305 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 364
V+ V VIGGGLMG+GIA VVL + + L K K IE ++R + +
Sbjct: 15 VKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENP 74
Query: 365 KANNAL--KMLKGVLDYSEFKDV----DMVIEAVIESVPLKQKIFSELEKACPPHCILAT 418
KA + K L + ++ V D+V+EA++E++ +K ++F L+K H I A+
Sbjct: 75 KAGDEFVEKTLSTIATSTDAASVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFAS 134
Query: 419 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXX 478
NTS++ + + T+ QDR G HFF+P VM L+E+++T TS + L+
Sbjct: 135 NTSSLQITSIANATTRQDRFAGLHFFNPVPVMKLVEVIKTPMTSQKTFESLVDFSKALGK 194
Query: 479 XXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFR--IDSAIR-SFGLPIGPFQLLDLA 535
+ GF V+R PY A L G D + ID+A++ G P+GPF+LLD
Sbjct: 195 HPVSCKDTPGFIVSRLLVPYLMEAIRLYERG-DASKEDIDTAMKLGAGYPMGPFELLDYV 253
Query: 536 GYGVAAATS---KEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYE 582
G E D P SP ++ L+ + GK G+G Y Y+
Sbjct: 254 GLDTTKFIVDGWHEMDAENPLHQ-PSPSLNKLVAENKFGKKTGEGFYKYK 302
>pdb|1M76|A Chain A, Crystal Structure Of The S137c Mutant Of L-3-Hydroxyacyl-
Coa Dehydrogenase In Complex With Nad And
Acetoacetyl-Coa
pdb|1M76|B Chain B, Crystal Structure Of The S137c Mutant Of L-3-Hydroxyacyl-
Coa Dehydrogenase In Complex With Nad And
Acetoacetyl-Coa
Length = 302
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 141/290 (48%), Gaps = 14/290 (4%)
Query: 305 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 364
V+ V VIGGGLMG+GIA VVL + + L K K IE ++R + +
Sbjct: 15 VKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENP 74
Query: 365 KANNAL--KMLKGVLDYSEFKDV----DMVIEAVIESVPLKQKIFSELEKACPPHCILAT 418
KA + K L + ++ V D+V+EA++E++ +K ++F L+K H I A+
Sbjct: 75 KAGDEFVEKTLSTIATSTDAASVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFAS 134
Query: 419 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXX 478
NT ++ + + T+ QDR G HFF+P VM L+E+++T TS + L+
Sbjct: 135 NTCSLQITSIANATTRQDRFAGLHFFNPVPVMKLVEVIKTPMTSQKTFESLVDFSKALGK 194
Query: 479 XXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFR--IDSAIR-SFGLPIGPFQLLDLA 535
+ GF VNR PY A L G D + ID+A++ G P+GPF+LLD
Sbjct: 195 HPVSCKDTPGFIVNRLLVPYLMEAIRLYERG-DASKEDIDTAMKLGAGYPMGPFELLDYV 253
Query: 536 GYGVAAATS---KEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYE 582
G E D P SP ++ L+ + GK G+G Y Y+
Sbjct: 254 GLDTTKFIVDGWHEMDAENPLHQ-PSPSLNKLVAENKFGKKTGEGFYKYK 302
>pdb|3PEA|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Anthracis Str. 'ames Ancestor'
pdb|3PEA|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Anthracis Str. 'ames Ancestor'
pdb|3PEA|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Anthracis Str. 'ames Ancestor'
pdb|3PEA|D Chain D, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Anthracis Str. 'ames Ancestor'
pdb|3PEA|E Chain E, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Anthracis Str. 'ames Ancestor'
pdb|3PEA|F Chain F, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Anthracis Str. 'ames Ancestor'
Length = 261
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 123/282 (43%), Gaps = 40/282 (14%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D +A+ TL + P NA + + + + ++ D+++ +V+ G G FS G DI F
Sbjct: 13 EDHIAVATLNHAPANAXSSQVXHDVTELIDQVEKDDNIRVVVIHGEGRFFSAGADIKEFT 72
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQL 131
V A + + + ++ +E C KP+ CH R A +L
Sbjct: 73 SVTEAKQATELAQLG-QVTFERVEKCSKPVIAAIHGAALGGGLEFAXSCHXRFATESAKL 131
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
GLPELTLG+IPG TQRLPR VG +KA E L S IT E K GL++ V E L
Sbjct: 132 GLPELTLGLIPGFAGTQRLPRYVGKAKACEXXLTSTPITGAEALKWGLVNGVFAEETFLD 191
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 248
+ A IA + S + AR VL+L LQ K++
Sbjct: 192 DTLKVAKQIAGK---------------SPATARAVLEL--LQTTKSSHY----------- 223
Query: 249 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATS 290
Y GV +EA++F E+ + R V F +R S
Sbjct: 224 --------YEGVQREAQIFGEVFTSEDGREGVAAFLEKRKPS 257
>pdb|2HDH|A Chain A, Biochemical Characterization And Structure Determination
Of Human Heart Short Chain L-3-Hydroxyacyl Coa
Dehydrogenase Provide Insight Into Catalytic Mechanism
pdb|2HDH|B Chain B, Biochemical Characterization And Structure Determination
Of Human Heart Short Chain L-3-Hydroxyacyl Coa
Dehydrogenase Provide Insight Into Catalytic Mechanism
Length = 293
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 127/273 (46%), Gaps = 17/273 (6%)
Query: 321 ATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNAL--KMLKGVLD 378
AT H VVL + + L K K IE ++R + + KA + K L +
Sbjct: 25 ATGHT-----VVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVAKTLSTIAT 79
Query: 379 YSEFKDV----DMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSS 434
++ V D+V+EA++E++ +K ++F L+K H I A+NTS++ + + T+
Sbjct: 80 STDAASVVHSTDLVVEAIVENLKVKNELFKRLDKRAAEHTIFASNTSSLQITSIANATTR 139
Query: 435 QDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRA 494
QDR G HFF+P V L+E+++T TS + L+ + GF VNR
Sbjct: 140 QDRFAGLHFFNPVPVXKLVEVIKTPXTSQKTFESLVDFSKALGKHPVSCKDTPGFIVNRL 199
Query: 495 FFPYSQSARLLVSLGVDVFR--IDSAIR-SFGLPIGPFQLLDLAGYGVAAATSKEFDKAF 551
PY A L G D + ID+A + G P GPF+LLD G + +
Sbjct: 200 LVPYLXEAIRLYERG-DASKEDIDTAXKLGAGYPXGPFELLDYVGLDTTKFIVDGWHEXD 258
Query: 552 PDRSFQ--SPLVDLLLKSGRNGKANGKGLYTYE 582
+ SP ++ L+ + GK G+G Y Y+
Sbjct: 259 AENPLHQPSPSLNKLVAENKFGKKTGEGFYKYK 291
>pdb|3RQS|A Chain A, Crystal Structure Of Human L-3- Hydroxyacyl-Coa
Dehydrogenase (Ec1.1.1.35) From Mitochondria At The
Resolution 2.0 A, Northeast Structural Genomics
Consortium Target Hr487, Mitochondrial Protein
Partnership
pdb|3RQS|B Chain B, Crystal Structure Of Human L-3- Hydroxyacyl-Coa
Dehydrogenase (Ec1.1.1.35) From Mitochondria At The
Resolution 2.0 A, Northeast Structural Genomics
Consortium Target Hr487, Mitochondrial Protein
Partnership
Length = 324
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 127/273 (46%), Gaps = 17/273 (6%)
Query: 321 ATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNAL--KMLKGVLD 378
AT H VVL + + L K K IE ++R + + KA + K L +
Sbjct: 58 ATGHT-----VVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIAT 112
Query: 379 YSEFKDV----DMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSS 434
++ V D+V+EA++E++ +K ++F L+K H I A+NTS++ + + T+
Sbjct: 113 STDAASVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTSSLQITSIANATTR 172
Query: 435 QDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRA 494
QDR G HFF+P V L+E+++T TS + L+ + GF VNR
Sbjct: 173 QDRFAGLHFFNPVPVXKLVEVIKTPXTSQKTFESLVDFSKALGKHPVSCKDTPGFIVNRL 232
Query: 495 FFPYSQSARLLVSLGVDVFR--IDSAIR-SFGLPIGPFQLLDLAGYGVAAATSKEFDKAF 551
PY A L G D + ID+A + G P GPF+LLD G + +
Sbjct: 233 LVPYLXEAIRLYERG-DASKEDIDTAXKLGAGYPXGPFELLDYVGLDTTKFIVDGWHEXD 291
Query: 552 PDRSFQ--SPLVDLLLKSGRNGKANGKGLYTYE 582
+ SP ++ L+ + GK G+G Y Y+
Sbjct: 292 AENPLHQPSPSLNKLVAENKFGKKTGEGFYKYK 324
>pdb|4DYD|A Chain A, Substrate-Directed Dual Catalysis Of Dicarbonyl Compounds
By Diketoreductase
pdb|4E12|A Chain A, Substrate-Directed Dual Catalysis Of Dicarbonyl Compounds
By Diketoreductase
pdb|4E13|A Chain A, Substrate-Directed Dual Catalysis Of Dicarbonyl Compounds
By Diketoreductase
Length = 283
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 132/292 (45%), Gaps = 25/292 (8%)
Query: 304 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT-RGKLT 362
G+ V V+G G++GS IA + V ++N++ L K E GL K
Sbjct: 3 GITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFE----GLAAVYEKEV 58
Query: 363 QDKANNALKMLKGVLDYSE-----FKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 417
A+ A + G + YS+ KD D+VIEAV ES+ LK+ I+++L + P I A
Sbjct: 59 AGAADGAAQKALGGIRYSDDLAQAVKDADLVIEAVPESLDLKRDIYTKLGELAPAKTIFA 118
Query: 418 TNTST-IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXX 476
TN+ST + ++VG T D+ + HF + V E++ T +T +V ++
Sbjct: 119 TNSSTLLPSDLVG-YTGRGDKFLALHFANHVWVNNTAEVMGTTKTDPEVYQQVVEFASAI 177
Query: 477 XXX-XXXXXNCTGFAVNRAFFP-YSQSARLLVSLGVDVFRIDSAIR-SFGLPIGPFQLLD 533
G+ +N P +A LLV D ID R G P GPF++ D
Sbjct: 178 GMVPIELKKEKAGYVLNSLLVPLLDAAAELLVDGIADPETIDKTWRIGTGAPKGPFEIFD 237
Query: 534 LAG----YGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTY 581
+ G Y +++ + + R F + L + + G+ G A G+G Y Y
Sbjct: 238 IVGLTTAYNISSVSGPK------QREFAAYLKENYIDKGKLGLATGEGFYRY 283
>pdb|1ZEJ|A Chain A, Crystal Structure Of The 3-Hydroxyacyl-Coa Dehydrogenase
(Hbd-9, Af2017) From Archaeoglobus Fulgidus Dsm 4304 At
2.00 A Resolution
Length = 293
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 125/281 (44%), Gaps = 29/281 (10%)
Query: 307 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 366
KV VIG GL G GIA A I + VVL++V+ K +EA R + L++ +
Sbjct: 14 KVFVIGAGLXGRGIAIA-IASKHEVVLQDVSE-------KALEA-AREQIPEELLSKIEF 64
Query: 367 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 426
L+ +K D D+V EAV E + K ++ E+E+ + L +NTS I ++
Sbjct: 65 TTTLEKVK---------DCDIVXEAVFEDLNTKVEVLREVERLT--NAPLCSNTSVISVD 113
Query: 427 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNC 486
+ E+ S R +G H+ +P HV PL+EIV + T ++ + + C
Sbjct: 114 DIAERLDSPSRFLGVHWXNPPHVXPLVEIVISRFTDSKTVAFVEGFLRELGKEVVV---C 170
Query: 487 TGFA-VNRAFFPYSQSARLLVSLGVDVFRIDSAIR-SFGL---PIGPFQLLDLAGYGVAA 541
G + VNR A + GV +D + GL GP LD G VA
Sbjct: 171 KGQSLVNRFNAAVLSEASRXIEEGVRAEDVDRVWKHHLGLLYTLFGPLGNLDYIGLDVAY 230
Query: 542 ATSKEFDKAFPDRSFQSP-LVDLLLKSGRNGKANGKGLYTY 581
S K F D F+ P + +K G G GKG+Y Y
Sbjct: 231 YASLYLYKRFGDEKFKPPEWLQEKIKKGEVGVKAGKGIYEY 271
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 7/80 (8%)
Query: 628 VVNESCRVLEEGIVVRASDLDDA--SVLGMSFPSYRGGIVFWADAVGANYVY-TSLKKWS 684
V++E+ R +EEG VRA D+D LG+ + + G + D +G + Y SL +
Sbjct: 183 VLSEASRXIEEG--VRAEDVDRVWKHHLGLLYTLF--GPLGNLDYIGLDVAYYASLYLYK 238
Query: 685 QLYGNFFKPSRFLEERATKG 704
+ FKP +L+E+ KG
Sbjct: 239 RFGDEKFKPPEWLQEKIKKG 258
>pdb|3MOY|A Chain A, Crystal Structure Of Probable Enoyl-Coa Hydratase From
Mycob Smegmatis
Length = 263
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 102/203 (50%), Gaps = 16/203 (7%)
Query: 14 GVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
GV +I L P +NAL + A + D + + ++ AIV+TG+ F+ G DI
Sbjct: 19 GVGLIRLDRPDALNALNQTLEAEVLDAARDFDADLEIGAIVVTGSERAFAAGADI----- 73
Query: 73 VHGAGDVSLMPDVSVELVV----NLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPK 128
A V+L P + E + + + +KPI M C IAA
Sbjct: 74 ---AEMVTLTPHQARERNLLSGWDSLTQVRKPIVAAVAGYALGGGCELAMLCDLVIAADT 130
Query: 129 TQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEE 185
+ G PE+TLG++PG TQRL R VG +KA+++ L +S+T+EE ++GL+ +V + +
Sbjct: 131 ARFGQPEITLGILPGLGGTQRLTRAVGKAKAMDLCLTGRSLTAEEAERVGLVSRIVPAAD 190
Query: 186 LLKVSRLWALDIAARRKPWIRSL 208
LL + A IA +P R++
Sbjct: 191 LLDEALAVAQRIARMSRPAGRAV 213
>pdb|3HRX|A Chain A, Crystal Structure Of Phenylacetic Acid Degradation Protein
Paag
pdb|3HRX|B Chain B, Crystal Structure Of Phenylacetic Acid Degradation Protein
Paag
pdb|3HRX|C Chain C, Crystal Structure Of Phenylacetic Acid Degradation Protein
Paag
pdb|3HRX|D Chain D, Crystal Structure Of Phenylacetic Acid Degradation Protein
Paag
pdb|3HRX|E Chain E, Crystal Structure Of Phenylacetic Acid Degradation Protein
Paag
pdb|3HRX|F Chain F, Crystal Structure Of Phenylacetic Acid Degradation Protein
Paag
Length = 254
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 95/196 (48%), Gaps = 17/196 (8%)
Query: 12 NDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVF 70
DGV ++TL P +NA+ ++ L +E +V+A++LTG G FS G D+ F
Sbjct: 7 QDGVLVLTLNRPEKLNAITGELLDALYAALKEGEEDREVRALLLTGAGRAFSAGQDLTEF 66
Query: 71 QKVHGAGDVSLMPDVSVEL-----VVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIA 125
GD PD L VV + +KP+ + R+A
Sbjct: 67 ------GDRK--PDYEAHLRRYNRVVEALSGLEKPLVVAVNGVAAGAGMSLALWGDLRLA 118
Query: 126 APKTQLGLPELTLGVIPGTQR---LPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 182
A + +G++P + LPRLVGL+KA E++LLS +++EE LGL+ VV
Sbjct: 119 AVGASFTTAFVRIGLVPDSGLSFLLPRLVGLAKAQELLLLSPRLSAEEALALGLVHRVVP 178
Query: 183 SEELLKVSRLWALDIA 198
+E+L++ + A ++A
Sbjct: 179 AEKLMEEALSLAKELA 194
>pdb|4FZW|A Chain A, Crystal Structure Of The Paaf-paag Hydratase-isomerase
Complex From E.coli
pdb|4FZW|B Chain B, Crystal Structure Of The Paaf-paag Hydratase-isomerase
Complex From E.coli
Length = 258
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 95/196 (48%), Gaps = 15/196 (7%)
Query: 15 VAIITLINPPV-NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKV 73
V ++TL P NAL ++ L ++ E A + + V+TGN F+ G D+N +
Sbjct: 15 VLLLTLNRPAARNALNNALLMQLVNELEAAATDTSISVCVITGNARFFAAGADLNEMAEK 74
Query: 74 HGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQLGL 133
A ++ D +L L + KP+ + C +A + GL
Sbjct: 75 DLAATLN---DTRPQLWARL-QAFNKPLIAAVNGYALGAGCELALLCDVVVAGENARFGL 130
Query: 134 PELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVS 190
PE+TLG++PG TQRL R VG S A +M+L +SIT+++ + GL+ V S+ L+
Sbjct: 131 PEITLGIMPGAGGTQRLIRSVGKSLASKMVLSGESITAQQAQQAGLVSDVFPSDLTLE-- 188
Query: 191 RLWALDIA---ARRKP 203
+AL +A AR P
Sbjct: 189 --YALQLASKMARHSP 202
>pdb|3Q0J|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Complex With The Inhibitor Acetoacetylcoa
pdb|3Q0J|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Complex With The Inhibitor Acetoacetylcoa
pdb|3Q0J|C Chain C, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Complex With The Inhibitor Acetoacetylcoa
pdb|3Q0J|D Chain D, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Complex With The Inhibitor Acetoacetylcoa
pdb|3Q0J|E Chain E, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Complex With The Inhibitor Acetoacetylcoa
pdb|3Q0J|F Chain F, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Complex With The Inhibitor Acetoacetylcoa
Length = 258
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 88/190 (46%), Gaps = 12/190 (6%)
Query: 15 VAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKV 73
V IITL P +NAL ++ + E D+ AI++TG+ F+ G DI
Sbjct: 15 VGIITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSAKAFAAGADIKEM--- 71
Query: 74 HGAGDVSLMPDVSVELVVNL--IEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQL 131
D++ + + + + P M C IAA +
Sbjct: 72 ---ADLTFADAFTADFFATWGKLAAVRTPTIAAVAGYALGGGCELAMMCDVLIAADTAKF 128
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
G PE+ LGV+PG +QRL R +G +KA++++L +++ + E + GL+ VV +++LL
Sbjct: 129 GQPEIKLGVLPGMGGSQRLTRAIGKAKAMDLILTGRTMDAAEAERSGLVSRVVPADDLLT 188
Query: 189 VSRLWALDIA 198
+R A I+
Sbjct: 189 EARATATTIS 198
>pdb|3H81|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Tuberculosis
pdb|3H81|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Tuberculosis
pdb|3H81|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Tuberculosis
Length = 278
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 88/190 (46%), Gaps = 12/190 (6%)
Query: 15 VAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKV 73
V IITL P +NAL ++ + E D+ AI++TG+ F+ G DI
Sbjct: 35 VGIITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSAKAFAAGADIKEM--- 91
Query: 74 HGAGDVSLMPDVSVELVVNL--IEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQL 131
D++ + + + + P M C IAA +
Sbjct: 92 ---ADLTFADAFTADFFATWGKLAAVRTPTIAAVAGYALGGGCELAMMCDVLIAADTAKF 148
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
G PE+ LGV+PG +QRL R +G +KA++++L +++ + E + GL+ VV +++LL
Sbjct: 149 GQPEIKLGVLPGMGGSQRLTRAIGKAKAMDLILTGRTMDAAEAERSGLVSRVVPADDLLT 208
Query: 189 VSRLWALDIA 198
+R A I+
Sbjct: 209 EARATATTIS 218
>pdb|1DUB|A Chain A, 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph 6.5
pdb|1DUB|B Chain B, 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph 6.5
pdb|1DUB|C Chain C, 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph 6.5
pdb|1DUB|D Chain D, 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph 6.5
pdb|1DUB|E Chain E, 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph 6.5
pdb|1DUB|F Chain F, 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph 6.5
pdb|2DUB|A Chain A, Enoyl-Coa Hydratase Complexed With Octanoyl-Coa
pdb|2DUB|B Chain B, Enoyl-Coa Hydratase Complexed With Octanoyl-Coa
pdb|2DUB|C Chain C, Enoyl-Coa Hydratase Complexed With Octanoyl-Coa
pdb|2DUB|D Chain D, Enoyl-Coa Hydratase Complexed With Octanoyl-Coa
pdb|2DUB|E Chain E, Enoyl-Coa Hydratase Complexed With Octanoyl-Coa
pdb|2DUB|F Chain F, Enoyl-Coa Hydratase Complexed With Octanoyl-Coa
Length = 261
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 84/200 (42%), Gaps = 18/200 (9%)
Query: 12 NDGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDIN-- 68
N V +I L P +NAL ++ L E V AIVLTG F+ G DI
Sbjct: 15 NSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEM 74
Query: 69 ---VFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIA 125
FQ + +S ++ KKP+ M C A
Sbjct: 75 QNRTFQDCYSGKFLSHWDHIT---------RIKKPVIAAVNGYALGGGCELAMMCDIIYA 125
Query: 126 APKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 182
K Q G PE+ LG IPG TQRL R VG S A+EM+L I++++ + GL+ +
Sbjct: 126 GEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKIFP 185
Query: 183 SEELLKVSRLWALDIAARRK 202
E L++ + A IA K
Sbjct: 186 VETLVEEAIQCAEKIANNSK 205
>pdb|1MJ3|A Chain A, Crystal Structure Analysis Of Rat Enoyl-Coa Hydratase In
Complex With Hexadienoyl-Coa
pdb|1MJ3|B Chain B, Crystal Structure Analysis Of Rat Enoyl-Coa Hydratase In
Complex With Hexadienoyl-Coa
pdb|1MJ3|C Chain C, Crystal Structure Analysis Of Rat Enoyl-Coa Hydratase In
Complex With Hexadienoyl-Coa
pdb|1MJ3|D Chain D, Crystal Structure Analysis Of Rat Enoyl-Coa Hydratase In
Complex With Hexadienoyl-Coa
pdb|1MJ3|E Chain E, Crystal Structure Analysis Of Rat Enoyl-Coa Hydratase In
Complex With Hexadienoyl-Coa
pdb|1MJ3|F Chain F, Crystal Structure Analysis Of Rat Enoyl-Coa Hydratase In
Complex With Hexadienoyl-Coa
Length = 260
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 84/200 (42%), Gaps = 18/200 (9%)
Query: 12 NDGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDIN-- 68
N V +I L P +NAL ++ L E V AIVLTG F+ G DI
Sbjct: 14 NSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEM 73
Query: 69 ---VFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIA 125
FQ + +S ++ KKP+ M C A
Sbjct: 74 QNRTFQDCYSGKFLSHWDHIT---------RIKKPVIAAVNGYALGGGCELAMMCDIIYA 124
Query: 126 APKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 182
K Q G PE+ LG IPG TQRL R VG S A+EM+L I++++ + GL+ +
Sbjct: 125 GEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKIFP 184
Query: 183 SEELLKVSRLWALDIAARRK 202
E L++ + A IA K
Sbjct: 185 VETLVEEAIQCAEKIANNSK 204
>pdb|3PZK|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Apo Form
pdb|3PZK|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Apo Form
pdb|3PZK|C Chain C, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Apo Form
pdb|3Q0G|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase Bound To A Reaction Intermediate Derived From
Crotonyl Coa
pdb|3Q0G|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase Bound To A Reaction Intermediate Derived From
Crotonyl Coa
pdb|3Q0G|C Chain C, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase Bound To A Reaction Intermediate Derived From
Crotonyl Coa
pdb|3Q0G|D Chain D, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase Bound To A Reaction Intermediate Derived From
Crotonyl Coa
pdb|3Q0G|E Chain E, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase Bound To A Reaction Intermediate Derived From
Crotonyl Coa
pdb|3Q0G|F Chain F, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase Bound To A Reaction Intermediate Derived From
Crotonyl Coa
Length = 257
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 88/190 (46%), Gaps = 12/190 (6%)
Query: 15 VAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKV 73
V IITL P +NAL ++ + E D+ AI++TG+ F+ G DI
Sbjct: 14 VGIITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSAKAFAAGADIKEM--- 70
Query: 74 HGAGDVSLMPDVSVELVVNL--IEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQL 131
D++ + + + + P M C IAA +
Sbjct: 71 ---ADLTFADAFTADFFATWGKLAAVRTPTIAAVAGYALGGGCELAMMCDVLIAADTAKF 127
Query: 132 GLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
G PE+ LGV+PG +QRL R +G +KA++++L +++ + E + GL+ VV +++LL
Sbjct: 128 GQPEIKLGVLPGMGGSQRLTRAIGKAKAMDLILTGRTMDAAEAERSGLVSRVVPADDLLT 187
Query: 189 VSRLWALDIA 198
+R A I+
Sbjct: 188 EARATATTIS 197
>pdb|1EY3|A Chain A, Structure Of Enoyl-Coa Hydratase Complexed With The
Substrate Dac-Coa
pdb|1EY3|B Chain B, Structure Of Enoyl-Coa Hydratase Complexed With The
Substrate Dac-Coa
pdb|1EY3|C Chain C, Structure Of Enoyl-Coa Hydratase Complexed With The
Substrate Dac-Coa
pdb|1EY3|D Chain D, Structure Of Enoyl-Coa Hydratase Complexed With The
Substrate Dac-Coa
pdb|1EY3|E Chain E, Structure Of Enoyl-Coa Hydratase Complexed With The
Substrate Dac-Coa
pdb|1EY3|F Chain F, Structure Of Enoyl-Coa Hydratase Complexed With The
Substrate Dac-Coa
Length = 258
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 84/200 (42%), Gaps = 18/200 (9%)
Query: 12 NDGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDIN-- 68
N V +I L P +NAL ++ L E V AIVLTG F+ G DI
Sbjct: 12 NSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEM 71
Query: 69 ---VFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIA 125
FQ + +S ++ KKP+ M C A
Sbjct: 72 QNRTFQDCYSGKFLSHWDHIT---------RIKKPVIAAVNGYALGGGCELAMMCDIIYA 122
Query: 126 APKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 182
K Q G PE+ LG IPG TQRL R VG S A+EM+L I++++ + GL+ +
Sbjct: 123 GEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKIFP 182
Query: 183 SEELLKVSRLWALDIAARRK 202
E L++ + A IA K
Sbjct: 183 VETLVEEAIQCAEKIANNSK 202
>pdb|2PBP|A Chain A, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) From Geobacillus Kaustophilus Hta426
pdb|2QQ3|A Chain A, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|B Chain B, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|C Chain C, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|D Chain D, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|E Chain E, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|F Chain F, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|G Chain G, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|H Chain H, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|I Chain I, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|J Chain J, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|K Chain K, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|L Chain L, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
Length = 258
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 86/186 (46%), Gaps = 22/186 (11%)
Query: 14 GVAIITLINPPV-NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
V II L P V NAL+ +VA + E + V+ IVLTG G F+ G DI K
Sbjct: 14 AVGIIELARPDVLNALSRQMVAEIVAAVEAFDRNEKVRVIVLTGRGRAFAAGADIQEMAK 73
Query: 73 VHGAGDVSLMPDVSVEL-VVNLIED------CKKPIXXXXXXXXXXXXXXXXMGCHARIA 125
D + L +N D K P+ + C +A
Sbjct: 74 -----------DDPIRLEWLNQFADWDRLSIVKTPMIAAVNGLALGGGFELALSCDLIVA 122
Query: 126 APKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 182
+ + G PE+ LGV+PG TQRL +L+G +A+E + ++++E +LG+++ VV+
Sbjct: 123 SSAAEFGFPEVNLGVMPGAGGTQRLTKLIGPKRALEWLWTGARMSAKEAEQLGIVNRVVS 182
Query: 183 SEELLK 188
E L++
Sbjct: 183 PELLME 188
>pdb|2HW5|A Chain A, The Crystal Structure Of Human Enoyl-Coenzyme A (Coa)
Hydratase Short Chain 1, Echs1
pdb|2HW5|B Chain B, The Crystal Structure Of Human Enoyl-Coenzyme A (Coa)
Hydratase Short Chain 1, Echs1
pdb|2HW5|C Chain C, The Crystal Structure Of Human Enoyl-Coenzyme A (Coa)
Hydratase Short Chain 1, Echs1
pdb|2HW5|D Chain D, The Crystal Structure Of Human Enoyl-Coenzyme A (Coa)
Hydratase Short Chain 1, Echs1
pdb|2HW5|E Chain E, The Crystal Structure Of Human Enoyl-Coenzyme A (Coa)
Hydratase Short Chain 1, Echs1
pdb|2HW5|F Chain F, The Crystal Structure Of Human Enoyl-Coenzyme A (Coa)
Hydratase Short Chain 1, Echs1
Length = 286
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 87/197 (44%), Gaps = 12/197 (6%)
Query: 12 NDGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVF 70
N+ V +I L P +NAL ++ L + V AIVLTG F+ G DI
Sbjct: 40 NNTVGLIQLNRPKALNALCDGLIDELNQALKIFEEDPAVGAIVLTGGDKAFAAGADIKEM 99
Query: 71 QKVHGAGDVSLMPDVSVELVVNL--IEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPK 128
Q ++S S + + + + KKP+ M C A K
Sbjct: 100 Q------NLSFQDCYSSKFLKHWDHLTQVKKPVIAAVNGYAFGGGCELAMMCDIIYAGEK 153
Query: 129 TQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEE 185
Q PE+ +G IPG TQRL R VG S A+EM+L I++++ + GL+ + E
Sbjct: 154 AQFAQPEILIGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKICPVET 213
Query: 186 LLKVSRLWALDIAARRK 202
L++ + A IA+ K
Sbjct: 214 LVEEAIQCAEKIASNSK 230
>pdb|3KQF|A Chain A, 1.8 Angstrom Resolution Crystal Structure Of Enoyl-Coa
Hydratase From Bacillus Anthracis.
pdb|3KQF|B Chain B, 1.8 Angstrom Resolution Crystal Structure Of Enoyl-Coa
Hydratase From Bacillus Anthracis.
pdb|3KQF|C Chain C, 1.8 Angstrom Resolution Crystal Structure Of Enoyl-Coa
Hydratase From Bacillus Anthracis.
pdb|3KQF|D Chain D, 1.8 Angstrom Resolution Crystal Structure Of Enoyl-Coa
Hydratase From Bacillus Anthracis.
pdb|3KQF|E Chain E, 1.8 Angstrom Resolution Crystal Structure Of Enoyl-Coa
Hydratase From Bacillus Anthracis.
pdb|3KQF|F Chain F, 1.8 Angstrom Resolution Crystal Structure Of Enoyl-Coa
Hydratase From Bacillus Anthracis
Length = 265
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 73/146 (50%), Gaps = 12/146 (8%)
Query: 41 EEATSRDDVKAIVLTGNGGR-FSGGFDINVFQKVHGAGDVSLMPDVS-VELVVNLIEDCK 98
EEA +R ++LTG G + F G D+ ++ G + + VS + +E
Sbjct: 50 EEANTR----VVILTGAGEKAFCAGADL---KERAGXNEEQVRHAVSXIRTTXEXVEQLP 102
Query: 99 KPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSK 155
+P+ + C RIAA LGL E TL +IPG TQRLPRL+G+ +
Sbjct: 103 QPVIAAINGIALGGGTELSLACDFRIAAESASLGLTETTLAIIPGAGGTQRLPRLIGVGR 162
Query: 156 AIEMMLLSKSITSEEGWKLGLIDAVV 181
A E++ + I+++E + GL++ VV
Sbjct: 163 AKELIYTGRRISAQEAKEYGLVEFVV 188
>pdb|4DI1|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa17 From
Mycobacterium Marinum
pdb|4DI1|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase Echa17 From
Mycobacterium Marinum
pdb|4DI1|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase Echa17 From
Mycobacterium Marinum
Length = 277
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 85/188 (45%), Gaps = 5/188 (2%)
Query: 10 VGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINV 69
V + G+A + + PP NA+ + + +E RDD+ A+VL G FS G D+
Sbjct: 29 VADQGLATLVVSRPPTNAMTRQVYREIVAAADELGRRDDIGAVVLFGGHEIFSAGDDMPE 88
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKT 129
+ ++ A + V +E ++ + KP + R++
Sbjct: 89 LRTLN-APEADTAARVRLE-AIDAVAAIPKPTVAAVTGYALGAGLTLALAADWRVSGDNV 146
Query: 130 QLGLPELTLGVIP---GTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL 186
+ G E+ G+IP G RL R+VG S+A E++ + +EE LGLID +V +++
Sbjct: 147 KFGATEILAGLIPGGGGMGRLTRVVGSSRAKELVFSGRFFDAEEALALGLIDDMVAPDDV 206
Query: 187 LKVSRLWA 194
+ WA
Sbjct: 207 YDSAVAWA 214
>pdb|2IEX|A Chain A, Crystal Structure Of Dihydroxynapthoic Acid Synthetase
(Gk2873) From Geobacillus Kaustophilus Hta426
pdb|2IEX|B Chain B, Crystal Structure Of Dihydroxynapthoic Acid Synthetase
(Gk2873) From Geobacillus Kaustophilus Hta426
pdb|2IEX|C Chain C, Crystal Structure Of Dihydroxynapthoic Acid Synthetase
(Gk2873) From Geobacillus Kaustophilus Hta426
Length = 272
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 91/204 (44%), Gaps = 12/204 (5%)
Query: 13 DGVAIITLINPPV-NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR-FSGGFDINVF 70
+G+A IT+ P V NA V + D F +A ++ I+LTG GG+ F G D
Sbjct: 20 NGIAKITINRPEVHNAFRPKTVNEMIDAFTKARDDSNIGVIILTGAGGKAFCSGGD---- 75
Query: 71 QKVHGAGDV---SLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAP 127
QKV G G +P ++V + LI KP+ + C IAA
Sbjct: 76 QKVRGHGGYVGEDEIPRLNVLDLQRLIRVIPKPVIAMVAGYAIGGGHVLHVVCDLTIAAD 135
Query: 128 KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 184
G +G G L R+VG KA E+ L + T++E ++GL++ VV E
Sbjct: 136 NAIFGQTGPKVGSFDGGYGAGYLARIVGHKKAREIWYLCRQYTAQEALEMGLVNKVVPLE 195
Query: 185 ELLKVSRLWALDIAARRKPWIRSL 208
+L + + WA +I + IR L
Sbjct: 196 QLEEETVKWAQEILEKSPTAIRFL 219
>pdb|3G64|A Chain A, Crystal Structure Of Putative Enoyl-Coa Hydratase From
Streptomyces Coelicolor A3(2)
pdb|3G64|B Chain B, Crystal Structure Of Putative Enoyl-Coa Hydratase From
Streptomyces Coelicolor A3(2)
pdb|3G64|C Chain C, Crystal Structure Of Putative Enoyl-Coa Hydratase From
Streptomyces Coelicolor A3(2)
Length = 279
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 83/194 (42%), Gaps = 7/194 (3%)
Query: 12 NDGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVF 70
DGVA +TL P +NAL A L+D E + R V+A+VL G G F G D++
Sbjct: 24 TDGVATVTLARPDKLNALTFEAYADLRDLLAELSRRRAVRALVLAGEGRGFCSGGDVDEI 83
Query: 71 QKVHGAGDVSLMPDVS--VELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPK 128
+ D + + D + VV + +C P+ + R+A P
Sbjct: 84 IGATLSXDTARLLDFNRXTGQVVRAVRECPFPVIAALHGVAAGAGAVLALAADFRVADPS 143
Query: 129 TQLGLPELTLGVIPG----TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 184
T+ +G+ G LPR+VGL A ++ L ++ + E ++GLI +
Sbjct: 144 TRFAFLFTRVGLSGGDXGAAYLLPRVVGLGHATRLLXLGDTVRAPEAERIGLISELTEEG 203
Query: 185 ELLKVSRLWALDIA 198
+ +R A +A
Sbjct: 204 RADEAARTLARRLA 217
>pdb|3QKA|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa5 From
Mycobacterium Marinum
pdb|3QKA|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase Echa5 From
Mycobacterium Marinum
pdb|3QKA|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase Echa5 From
Mycobacterium Marinum
pdb|3QKA|D Chain D, Crystal Structure Of Enoyl-Coa Hydratase Echa5 From
Mycobacterium Marinum
pdb|3QKA|E Chain E, Crystal Structure Of Enoyl-Coa Hydratase Echa5 From
Mycobacterium Marinum
pdb|3QKA|F Chain F, Crystal Structure Of Enoyl-Coa Hydratase Echa5 From
Mycobacterium Marinum
Length = 261
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 76/184 (41%), Gaps = 19/184 (10%)
Query: 8 MEVGNDGVAIITLINPPV--NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
++V +G +IN P NA+ P A L F E + VL GNGG F G
Sbjct: 10 VQVERNGPVTTVIINRPQARNAVNGPTAAALYSAFAEFDRDESASVAVLCGNGGTFCAGA 69
Query: 66 DINVF-----QKVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGC 120
D+ F VH G + P + KP+ + C
Sbjct: 70 DLKAFGTAEANAVHRTGPGPMGPSRMM---------LSKPVIAAVSGYAVAGGLELALWC 120
Query: 121 HARIAAPKTQLGLPELTLGVI---PGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 177
R+A G+ GV GT RLPRL+G S+A++M+L +++ ++E +GL
Sbjct: 121 DLRVAEQDAVFGVFCRRWGVPLIDGGTVRLPRLIGHSRAMDMILTGRAVQADEALAIGLA 180
Query: 178 DAVV 181
+ VV
Sbjct: 181 NRVV 184
>pdb|3SLL|A Chain A, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3SLL|B Chain B, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3SLL|C Chain C, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3SLL|D Chain D, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3SLL|E Chain E, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3SLL|F Chain F, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
Length = 290
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 95/211 (45%), Gaps = 18/211 (8%)
Query: 15 VAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKV 73
+A++TL P +NA+A ++ K + + +DV+A+V+TG G F G D +
Sbjct: 34 IALVTLNRPERMNAMAFDVMLPFKQMLVDISHDNDVRAVVITGAGKGFCSGADQKSAGPI 93
Query: 74 HGAGDVSLMPDV---SVELVVNLIEDCKK---PIXXXXXXXXXXXXXXXXMGCHARIAAP 127
G ++ P + S+EL+ +I ++ P+ + C R+A+
Sbjct: 94 PHIGGLT-QPTIALRSMELLDEVILTLRRMHQPVIAAINGAAIGGGLCLALACDVRVASQ 152
Query: 128 KTQL-------GLPELTLGVIPGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAV 180
GL LG+ + LPR +G S+A ++ML + + ++E ++GL+
Sbjct: 153 DAYFRAAGINNGLTASELGL---SYLLPRAIGTSRASDIMLTGRDVDADEAERIGLVSRK 209
Query: 181 VTSEELLKVSRLWALDIAARRKPWIRSLHRT 211
V SE LL+ IA +P I RT
Sbjct: 210 VASESLLEECYAIGERIAGFSRPGIELTKRT 240
>pdb|4ELS|A Chain A, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Bicarbonate
pdb|4ELS|B Chain B, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Bicarbonate
pdb|4ELS|C Chain C, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Bicarbonate
pdb|4ELS|D Chain D, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Bicarbonate
pdb|4ELS|E Chain E, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Bicarbonate
pdb|4ELS|F Chain F, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Bicarbonate
pdb|4ELW|A Chain A, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Nitrate
pdb|4ELW|B Chain B, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Nitrate
pdb|4ELW|C Chain C, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Nitrate
pdb|4ELW|D Chain D, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Nitrate
pdb|4ELW|E Chain E, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Nitrate
pdb|4ELW|F Chain F, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Nitrate
pdb|4ELX|A Chain A, Structure Of Apo E.Coli. 1,4-Dihydroxy-2- Naphthoyl Coa
Synthases With Cl
pdb|4ELX|B Chain B, Structure Of Apo E.Coli. 1,4-Dihydroxy-2- Naphthoyl Coa
Synthases With Cl
pdb|4ELX|C Chain C, Structure Of Apo E.Coli. 1,4-Dihydroxy-2- Naphthoyl Coa
Synthases With Cl
pdb|4ELX|D Chain D, Structure Of Apo E.Coli. 1,4-Dihydroxy-2- Naphthoyl Coa
Synthases With Cl
pdb|4ELX|E Chain E, Structure Of Apo E.Coli. 1,4-Dihydroxy-2- Naphthoyl Coa
Synthases With Cl
pdb|4ELX|F Chain F, Structure Of Apo E.Coli. 1,4-Dihydroxy-2- Naphthoyl Coa
Synthases With Cl
Length = 285
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 80/197 (40%), Gaps = 5/197 (2%)
Query: 6 VTMEVGNDGVAIITLINPPV-NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR-FSG 63
+ E DG+A IT+ P V NA V + +A D++ I+LTG G + F
Sbjct: 25 IRYEKSTDGIAKITINRPQVRNAFRPLTVKEMIQALADARYDDNIGVIILTGAGDKAFCS 84
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHAR 123
G D V G D S + ++V I C KP+ M C
Sbjct: 85 GGDQKVRGDYGGYKDDSGVHHLNVLDFQRQIRTCPKPVVAMVAGYSIGGGHVLHMMCDLT 144
Query: 124 IAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAV 180
IAA G +G G + R+VG KA E+ L + +++ +GL++ V
Sbjct: 145 IAADNAIFGQTGPKVGSFDGGWGASYMARIVGQKKAREIWFLCRQYDAKQALDMGLVNTV 204
Query: 181 VTSEELLKVSRLWALDI 197
V +L K + W ++
Sbjct: 205 VPLADLEKETVRWCREM 221
>pdb|3T88|A Chain A, Crystal Structure Of Escherichia Coli Menb In Complex With
Substrate Analogue, Osb-Ncoa
pdb|3T88|B Chain B, Crystal Structure Of Escherichia Coli Menb In Complex With
Substrate Analogue, Osb-Ncoa
pdb|3T88|C Chain C, Crystal Structure Of Escherichia Coli Menb In Complex With
Substrate Analogue, Osb-Ncoa
pdb|3T88|D Chain D, Crystal Structure Of Escherichia Coli Menb In Complex With
Substrate Analogue, Osb-Ncoa
pdb|3T88|E Chain E, Crystal Structure Of Escherichia Coli Menb In Complex With
Substrate Analogue, Osb-Ncoa
pdb|3T88|F Chain F, Crystal Structure Of Escherichia Coli Menb In Complex With
Substrate Analogue, Osb-Ncoa
pdb|3T89|A Chain A, Crystal Structure Of Escherichia Coli Menb, The
1,4-Dihydroxy-2- Naphthoyl-Coa Synthase In Vitamin K2
Biosynthesis
pdb|3T89|B Chain B, Crystal Structure Of Escherichia Coli Menb, The
1,4-Dihydroxy-2- Naphthoyl-Coa Synthase In Vitamin K2
Biosynthesis
pdb|3T89|C Chain C, Crystal Structure Of Escherichia Coli Menb, The
1,4-Dihydroxy-2- Naphthoyl-Coa Synthase In Vitamin K2
Biosynthesis
pdb|3T89|D Chain D, Crystal Structure Of Escherichia Coli Menb, The
1,4-Dihydroxy-2- Naphthoyl-Coa Synthase In Vitamin K2
Biosynthesis
pdb|3T89|E Chain E, Crystal Structure Of Escherichia Coli Menb, The
1,4-Dihydroxy-2- Naphthoyl-Coa Synthase In Vitamin K2
Biosynthesis
pdb|3T89|F Chain F, Crystal Structure Of Escherichia Coli Menb, The
1,4-Dihydroxy-2- Naphthoyl-Coa Synthase In Vitamin K2
Biosynthesis
Length = 289
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 80/197 (40%), Gaps = 5/197 (2%)
Query: 6 VTMEVGNDGVAIITLINPPV-NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR-FSG 63
+ E DG+A IT+ P V NA V + +A D++ I+LTG G + F
Sbjct: 29 IRYEKSTDGIAKITINRPQVRNAFRPLTVKEMIQALADARYDDNIGVIILTGAGDKAFCS 88
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHAR 123
G D V G D S + ++V I C KP+ M C
Sbjct: 89 GGDQKVRGDYGGYKDDSGVHHLNVLDFQRQIRTCPKPVVAMVAGYSIGGGHVLHMMCDLT 148
Query: 124 IAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAV 180
IAA G +G G + R+VG KA E+ L + +++ +GL++ V
Sbjct: 149 IAADNAIFGQTGPKVGSFDGGWGASYMARIVGQKKAREIWFLCRQYDAKQALDMGLVNTV 208
Query: 181 VTSEELLKVSRLWALDI 197
V +L K + W ++
Sbjct: 209 VPLADLEKETVRWCREM 225
>pdb|3RSI|A Chain A, The Structure Of A Putative Enoyl-Coa HydrataseISOMERASE
FROM Mycobacterium Abscessus Atcc 19977 DSM 44196
pdb|3RSI|B Chain B, The Structure Of A Putative Enoyl-Coa HydrataseISOMERASE
FROM Mycobacterium Abscessus Atcc 19977 DSM 44196
pdb|3RSI|C Chain C, The Structure Of A Putative Enoyl-Coa HydrataseISOMERASE
FROM Mycobacterium Abscessus Atcc 19977 DSM 44196
Length = 265
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 87/196 (44%), Gaps = 7/196 (3%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPP--VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNG 58
M+A R + V DG +I +N P NAL+ +V+ ++E D ++A +LTG G
Sbjct: 5 MSAARELL-VERDGPVVILTMNRPHRRNALSTNMVSQFAAAWDEIDHDDGIRAAILTGAG 63
Query: 59 GRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXM 118
+ G D++ V L P ++ + L KP+
Sbjct: 64 SAYCVGGDLSDGWMVRDGSAPPLDP-ATIGKGLLLSHTLTKPLIAAVNGACLGGGCEMLQ 122
Query: 119 GCHARIAAPKTQLGLPELTLGVIPGTQ---RLPRLVGLSKAIEMMLLSKSITSEEGWKLG 175
R++ GLPE+ G++PG RL R + +KA+EM+L + +T+ E + G
Sbjct: 123 QTDIRVSDEHATFGLPEVQRGLVPGAGSMVRLKRQIPYTKAMEMILTGEPLTAFEAYHFG 182
Query: 176 LIDAVVTSEELLKVSR 191
L+ VV + L +R
Sbjct: 183 LVGHVVPAGTALDKAR 198
>pdb|3HIN|A Chain A, Crystal Structure Of Putative Enoyl-Coa Hydratase From
Rhodopseudomonas Palustris Cga009
pdb|3HIN|B Chain B, Crystal Structure Of Putative Enoyl-Coa Hydratase From
Rhodopseudomonas Palustris Cga009
Length = 275
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 7/149 (4%)
Query: 26 NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDV 85
NAL ++A LKD + D ++A+V+ G G FS G D++ ++ L+
Sbjct: 38 NALNDGLMAALKDCLTDIP--DQIRAVVIHGIGDHFSAGLDLSELRERDAT--EGLVHSQ 93
Query: 86 SVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQLGLPELTLGVI---P 142
+ V + I+ C+ P+ H R+A LPE + G+
Sbjct: 94 TWHRVFDKIQYCRVPVIAALKGAVIGGGLELACAAHIRVAEASAYYALPEGSRGIFVGGG 153
Query: 143 GTQRLPRLVGLSKAIEMMLLSKSITSEEG 171
G+ RLPRL+G+++ +MML + ++ EG
Sbjct: 154 GSVRLPRLIGVARMADMMLTGRVYSAAEG 182
>pdb|2UZF|A Chain A, Crystal Structure Of Staphylococcus Aureus
1,4-Dihydroxy-2- Naphthoyl Coa Synthase (Menb) In
Complex With Acetoacetyl Coa
pdb|2UZF|B Chain B, Crystal Structure Of Staphylococcus Aureus
1,4-Dihydroxy-2- Naphthoyl Coa Synthase (Menb) In
Complex With Acetoacetyl Coa
Length = 273
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 89/220 (40%), Gaps = 17/220 (7%)
Query: 13 DGVAIITLINPPV-NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGG-RFSGGFDINVF 70
+G+A +T+ P V NA VA + D F A +V IVLTG G F G D
Sbjct: 21 EGIAKVTINRPEVRNAFTPKTVAEMIDAFSRARDDQNVSVIVLTGEGDLAFCSGGD---- 76
Query: 71 QKVHGAGDV---SLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAP 127
QK G G +P ++V + LI KP+ + C IAA
Sbjct: 77 QKKRGHGGYVGEDQIPRLNVLDLQRLIRIIPKPVIAMVKGYAVGGGNVLNVVCDLTIAAD 136
Query: 128 KTQLGLPELTLGVIP---GTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 184
G +G G+ L R+VG KA E+ L + ++E +GL++ VV E
Sbjct: 137 NAIFGQTGPKVGSFDAGYGSGYLARIVGHKKAREIWYLCRQYNAQEALDMGLVNTVVPLE 196
Query: 185 ELLKVSRLWALDIAARRKPWIRSLH-----RTDKLGSLSE 219
++ + W +I +R L TD L L +
Sbjct: 197 KVEDETVQWCKEIMKHSPTALRFLKAAMNADTDGLAGLQQ 236
>pdb|2PPY|A Chain A, Crystal Structure Of Enoyl-Coa Hydrates (Gk_1992) From
Geobacillus Kaustophilus Hta426
pdb|2PPY|B Chain B, Crystal Structure Of Enoyl-Coa Hydrates (Gk_1992) From
Geobacillus Kaustophilus Hta426
pdb|2PPY|C Chain C, Crystal Structure Of Enoyl-Coa Hydrates (Gk_1992) From
Geobacillus Kaustophilus Hta426
pdb|2PPY|D Chain D, Crystal Structure Of Enoyl-Coa Hydrates (Gk_1992) From
Geobacillus Kaustophilus Hta426
pdb|2PPY|E Chain E, Crystal Structure Of Enoyl-Coa Hydrates (Gk_1992) From
Geobacillus Kaustophilus Hta426
pdb|2PPY|F Chain F, Crystal Structure Of Enoyl-Coa Hydrates (Gk_1992) From
Geobacillus Kaustophilus Hta426
Length = 265
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 52/85 (61%), Gaps = 4/85 (4%)
Query: 118 MGCHARIAAPKT-QLGLPELTLGVIPGT---QRLPRLVGLSKAIEMMLLSKSITSEEGWK 173
+ C R + ++GLPE++LGV+ GT QRL RL+G S+A++ + ++IT +E +
Sbjct: 121 LACDLRFXGDEAGKIGLPEVSLGVLAGTGGTQRLARLIGYSRALDXNITGETITPQEALE 180
Query: 174 LGLIDAVVTSEELLKVSRLWALDIA 198
+GL++ V E + +R +A +A
Sbjct: 181 IGLVNRVFPQAETRERTREYARKLA 205
>pdb|1JXZ|A Chain A, Structure Of The H90q Mutant Of 4-Chlorobenzoyl-Coenzyme A
Dehalogenase Complexed With 4-Hydroxybenzoyl-Coenzyme A
(Product)
pdb|1JXZ|B Chain B, Structure Of The H90q Mutant Of 4-Chlorobenzoyl-Coenzyme A
Dehalogenase Complexed With 4-Hydroxybenzoyl-Coenzyme A
(Product)
pdb|1JXZ|C Chain C, Structure Of The H90q Mutant Of 4-Chlorobenzoyl-Coenzyme A
Dehalogenase Complexed With 4-Hydroxybenzoyl-Coenzyme A
(Product)
Length = 269
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 88/195 (45%), Gaps = 7/195 (3%)
Query: 12 NDGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF---DI 67
DGVA IT+ P NAL++ + + D A D V A+++TG F GF +I
Sbjct: 10 EDGVAEITIKLPRHRNALSVKAMQEVTDALNRAEEDDSVGAVMITGAEDAFCAGFYLREI 69
Query: 68 NVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAP 127
+ + V G D + + + +++ I K+P+ + I A
Sbjct: 70 PLDKGVAGVRDHFRIAALWWQQMIHKIIRVKRPVLAAINGVAAGGGLGISLASDMAICAD 129
Query: 128 KTQLGLPELTLGV---IPGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 184
+ T+G+ + L R+VG+ +A+E+ML ++++ EE GL+ V +
Sbjct: 130 SAKFVCAWHTIGIGNDTATSYSLARIVGMRRAMELMLTNRTLYPEEAKDWGLVSRVYPKD 189
Query: 185 ELLKVSRLWALDIAA 199
E +V+ A ++AA
Sbjct: 190 EFREVAWKVARELAA 204
>pdb|3TRR|A Chain A, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3TRR|B Chain B, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3TRR|C Chain C, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3TRR|D Chain D, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3TRR|E Chain E, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3TRR|F Chain F, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
Length = 256
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 82/198 (41%), Gaps = 28/198 (14%)
Query: 13 DGVAIITLINPPV-NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVF- 70
D V +IT+ P NA+ + GL ++ S D+ ++TG GG F G D+ F
Sbjct: 15 DRVLLITINRPDARNAVNRAVSQGLAAAADQLDSSADLSVAIITGAGGNFCAGMDLKAFV 74
Query: 71 -----QKVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIA 125
G G ++ P +KPI + C +A
Sbjct: 75 SGEAVLSERGLGFTNVPP--------------RKPIIAAVEGFALAGGTELVLSCDLVVA 120
Query: 126 APKTQLGLPELTLGVIPGTQ---RLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 182
+ G+PE+ G++ G RLP + A+E+ L +S T+E+ K G I+ +V
Sbjct: 121 GRSAKFGIPEVKRGLVAGAGGLLRLPNRIPYQVAMELALTGESFTAEDAAKYGFINRLVD 180
Query: 183 SEELLKVSRLWALDIAAR 200
+ L AL++AA+
Sbjct: 181 DGQALDT----ALELAAK 194
>pdb|1HZD|A Chain A, Crystal Structure Of Human Auh Protein, An Rna-Binding
Homologue Of Enoyl-Coa Hydratase
pdb|1HZD|B Chain B, Crystal Structure Of Human Auh Protein, An Rna-Binding
Homologue Of Enoyl-Coa Hydratase
pdb|1HZD|C Chain C, Crystal Structure Of Human Auh Protein, An Rna-Binding
Homologue Of Enoyl-Coa Hydratase
pdb|1HZD|D Chain D, Crystal Structure Of Human Auh Protein, An Rna-Binding
Homologue Of Enoyl-Coa Hydratase
pdb|1HZD|E Chain E, Crystal Structure Of Human Auh Protein, An Rna-Binding
Homologue Of Enoyl-Coa Hydratase
pdb|1HZD|F Chain F, Crystal Structure Of Human Auh Protein, An Rna-Binding
Homologue Of Enoyl-Coa Hydratase
pdb|2ZQQ|A Chain A, Crystal Structure Of Human Auh (3-Methylglutaconyl-Coa
Hydratase) Mixed With (Auuu)24a Rna
pdb|2ZQQ|B Chain B, Crystal Structure Of Human Auh (3-Methylglutaconyl-Coa
Hydratase) Mixed With (Auuu)24a Rna
pdb|2ZQQ|C Chain C, Crystal Structure Of Human Auh (3-Methylglutaconyl-Coa
Hydratase) Mixed With (Auuu)24a Rna
pdb|2ZQQ|D Chain D, Crystal Structure Of Human Auh (3-Methylglutaconyl-Coa
Hydratase) Mixed With (Auuu)24a Rna
pdb|2ZQQ|E Chain E, Crystal Structure Of Human Auh (3-Methylglutaconyl-Coa
Hydratase) Mixed With (Auuu)24a Rna
pdb|2ZQQ|F Chain F, Crystal Structure Of Human Auh (3-Methylglutaconyl-Coa
Hydratase) Mixed With (Auuu)24a Rna
pdb|2ZQR|A Chain A, Crystal Structure Of Auh Without Rna
pdb|2ZQR|B Chain B, Crystal Structure Of Auh Without Rna
pdb|2ZQR|C Chain C, Crystal Structure Of Auh Without Rna
pdb|2ZQR|D Chain D, Crystal Structure Of Auh Without Rna
pdb|2ZQR|E Chain E, Crystal Structure Of Auh Without Rna
pdb|2ZQR|F Chain F, Crystal Structure Of Auh Without Rna
Length = 272
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 8/178 (4%)
Query: 26 NALAIPIVAGLKDKFEEATSRDDVKAIVLTGN-GGRFSGGFDINVFQKVHGAGDVSLMPD 84
N+L+ ++ L + S V+ I++ G F G D+ K+ + + P
Sbjct: 34 NSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERAKMSSS---EVGPF 90
Query: 85 VS-VELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQLGLPELTLGVIPG 143
VS + V+N I + P + C R+AA ++GL E L +IPG
Sbjct: 91 VSKIRAVINDIANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLVETKLAIIPG 150
Query: 144 ---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIA 198
TQRLPR +G+S A E++ ++ + +E +GLI V+ + + ALD+A
Sbjct: 151 GGGTQRLPRAIGMSLAKELIFSARVLDGKEAKAVGLISHVLEQNQEGDAAYRKALDLA 208
>pdb|1NZY|A Chain A, 4-Chlorobenzoyl Coenzyme A Dehalogenase From Pseudomonas
Sp. Strain Cbs-3
pdb|1NZY|C Chain C, 4-Chlorobenzoyl Coenzyme A Dehalogenase From Pseudomonas
Sp. Strain Cbs-3
Length = 269
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 87/195 (44%), Gaps = 7/195 (3%)
Query: 12 NDGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF---DI 67
DGVA IT+ P NAL++ + + D A D V A+++TG F GF +I
Sbjct: 10 EDGVAEITIKLPRHRNALSVKAMQEVTDALNRAEEDDSVGAVMITGAEDAFCAGFYLREI 69
Query: 68 NVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAP 127
+ + V G D + + +++ I K+P+ + I A
Sbjct: 70 PLDKGVAGVRDHFRIAALWWHQMIHKIIRVKRPVLAAINGVAAGGGLGISLASDMAICAD 129
Query: 128 KTQLGLPELTLGV---IPGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 184
+ T+G+ + L R+VG+ +A+E+ML ++++ EE GL+ V +
Sbjct: 130 SAKFVCAWHTIGIGNDTATSYSLARIVGMRRAMELMLTNRTLYPEEAKDWGLVSRVYPKD 189
Query: 185 ELLKVSRLWALDIAA 199
E +V+ A ++AA
Sbjct: 190 EFREVAWKVARELAA 204
>pdb|3H02|A Chain A, 2.15 Angstrom Resolution Crystal Structure Of Naphthoate
Synthase From Salmonella Typhimurium.
pdb|3H02|B Chain B, 2.15 Angstrom Resolution Crystal Structure Of Naphthoate
Synthase From Salmonella Typhimurium.
pdb|3H02|C Chain C, 2.15 Angstrom Resolution Crystal Structure Of Naphthoate
Synthase From Salmonella Typhimurium.
pdb|3H02|D Chain D, 2.15 Angstrom Resolution Crystal Structure Of Naphthoate
Synthase From Salmonella Typhimurium.
pdb|3H02|E Chain E, 2.15 Angstrom Resolution Crystal Structure Of Naphthoate
Synthase From Salmonella Typhimurium.
pdb|3H02|F Chain F, 2.15 Angstrom Resolution Crystal Structure Of Naphthoate
Synthase From Salmonella Typhimurium
Length = 288
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 75/194 (38%), Gaps = 5/194 (2%)
Query: 6 VTMEVGNDGVAIITLINPPV-NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR-FSG 63
+ E DG+A IT+ P V NA V +A D+V I+LTG G + F
Sbjct: 28 IRYEKSTDGIAKITINRPQVRNAFRPLTVKEXIQALADARYDDNVGVIILTGEGDKAFCA 87
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHAR 123
G D V G D S + ++V I C KP+ C
Sbjct: 88 GGDQKVRGDYGGYQDDSGVHHLNVLDFQRQIRTCPKPVVAXVAGYSIGGGHVLHXXCDLT 147
Query: 124 IAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAV 180
IAA G +G G R+VG KA E+ L + +++ GL++ V
Sbjct: 148 IAAENAIFGQTGPKVGSFDGGWGASYXARIVGQKKAREIWFLCRQYDAQQALDXGLVNTV 207
Query: 181 VTSEELLKVSRLWA 194
V +L K + W
Sbjct: 208 VPLADLEKETVRWC 221
>pdb|1NZY|B Chain B, 4-Chlorobenzoyl Coenzyme A Dehalogenase From Pseudomonas
Sp. Strain Cbs-3
Length = 269
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 86/195 (44%), Gaps = 7/195 (3%)
Query: 12 NDGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF---DI 67
DGVA IT+ P NAL++ + + D A D V A+++TG F GF +I
Sbjct: 10 EDGVAEITIKLPRHRNALSVKAMQEVTDALNRAEEDDSVGAVMITGAEDAFCAGFYLREI 69
Query: 68 NVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAP 127
+ + V G D + + +++ I K+P+ + I A
Sbjct: 70 PLDKGVAGVRDHFRIAALWWHQMIHKIIRVKRPVLAAINGVAAGGGLGISLASDMAICAD 129
Query: 128 KTQLGLPELTLGV---IPGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 184
+ T+G+ + L R+VG+ +A+E+ML +++ EE GL+ V +
Sbjct: 130 SAKFVCAWHTIGIGNDTATSYSLARIVGMRRAMELMLTDRTLYPEEAKDWGLVSRVYPKD 189
Query: 185 ELLKVSRLWALDIAA 199
E +V+ A ++AA
Sbjct: 190 EFREVAWKVARELAA 204
>pdb|3QXZ|A Chain A, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3QXZ|B Chain B, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3QXZ|C Chain C, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
Length = 265
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 81/196 (41%), Gaps = 7/196 (3%)
Query: 12 NDGVAIITLINPPV-NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVF 70
DGVA++TL P N+ + + L ++ V+ IVLTG F G I+
Sbjct: 14 RDGVAVLTLHGPSTRNSFTVELGRQLGAAYQRLDDDPAVRVIVLTGAPPAFCSGAQISAA 73
Query: 71 QKVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQ 130
+ A PD S V + + P+ + RI A + +
Sbjct: 74 AETFAA---PRNPDFSASPVQPAAFELRTPVIAAVNGHAIGIGMTLALHADIRILAEEGR 130
Query: 131 LGLPELTLGVIP---GTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELL 187
+P++ GV P LPRLVG + A E++L S +++ + GL + + + ++L
Sbjct: 131 YAIPQVRFGVAPDALAHWTLPRLVGTAVAAELLLTGASFSAQRAVETGLANRCLPAGKVL 190
Query: 188 KVSRLWALDIAARRKP 203
+ A DIA P
Sbjct: 191 GAALRMAHDIATNVAP 206
>pdb|3ISA|A Chain A, Crystal Structure Of Putative Enoyl-Coa HydrataseISOMERASE
FROM Bordetella Parapertussis
pdb|3ISA|B Chain B, Crystal Structure Of Putative Enoyl-Coa HydrataseISOMERASE
FROM Bordetella Parapertussis
pdb|3ISA|C Chain C, Crystal Structure Of Putative Enoyl-Coa HydrataseISOMERASE
FROM Bordetella Parapertussis
pdb|3ISA|D Chain D, Crystal Structure Of Putative Enoyl-Coa HydrataseISOMERASE
FROM Bordetella Parapertussis
pdb|3ISA|E Chain E, Crystal Structure Of Putative Enoyl-Coa HydrataseISOMERASE
FROM Bordetella Parapertussis
pdb|3ISA|F Chain F, Crystal Structure Of Putative Enoyl-Coa HydrataseISOMERASE
FROM Bordetella Parapertussis
Length = 254
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 68/152 (44%), Gaps = 3/152 (1%)
Query: 26 NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDV 85
NAL+ +V L D + A R+ V +V G G FS GFD ++ GD+ L+ V
Sbjct: 29 NALSAELVEALIDGVD-AAHREQVPLLVFAGAGRNFSAGFDFTDYE-TQSEGDL-LLRMV 85
Query: 86 SVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQLGLPELTLGVIPGTQ 145
+E+++ + C R P+ +P L G++ GT+
Sbjct: 86 RIEMLLQRVAGSPSLTLALAHGRNFGAGVDLFAACKWRYCTPEAGFRMPGLKFGLVLGTR 145
Query: 146 RLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 177
R +VG +A+ ++ +++ ++E ++G +
Sbjct: 146 RFRDIVGADQALSILGSARAFDADEARRIGFV 177
>pdb|3Q1T|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Avium
pdb|3Q1T|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Avium
pdb|3Q1T|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Avium
pdb|3Q1T|D Chain D, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Avium
pdb|3Q1T|E Chain E, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Avium
pdb|3Q1T|F Chain F, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Avium
Length = 278
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 86/192 (44%), Gaps = 7/192 (3%)
Query: 4 PRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSG 63
P + E+G+DGV + L +P +N++ + L D + V+A+++ G G FS
Sbjct: 19 PSLRCELGDDGVLTVVLDSPGLNSVGPQMHRDLADIWPVIDRDPAVRAVLVRGEGKAFSS 78
Query: 64 GFDINVFQKVHG--AGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCH 121
G ++ + G G + +M + +LV N+I +C P+ +
Sbjct: 79 GGSFDLIDETIGDYQGRIRIMREAR-DLVHNMI-NCDTPVVSAIRGPAVGAGLVVALLAD 136
Query: 122 ARIAAPKTQLGLPELTLGVIPGTQR---LPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+A +L LGV G P LVG++KA +L +++ EE ++GL+
Sbjct: 137 ISVAGRTAKLIDGHTKLGVAAGDHAAICWPLLVGMAKAKYYLLTCETLLGEEAERIGLVS 196
Query: 179 AVVTSEELLKVS 190
V +++L +
Sbjct: 197 LCVDDDDVLSTA 208
>pdb|3P85|A Chain A, Crystal Structure Enoyl-Coa Hydratase From Mycobacterium
Avium
Length = 270
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 88/210 (41%), Gaps = 27/210 (12%)
Query: 15 VAIITLINPPV-NALAIPIVAGLKDKF----EEATSRDDVKAIVLTGNGGRFSGGFDINV 69
V +TL P NAL+ A L+D+F +A + DDV +++TG F G D+
Sbjct: 35 VRTLTLNRPQARNALS----AALRDRFFGALADAETDDDVDVVIITGADPVFCAGLDLKE 90
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKT 129
G S +PD+S KP+ + C IA+
Sbjct: 91 L------GGSSALPDISPRWPA-----LTKPVIGAINGAAVTGGLELALYCDILIASENA 139
Query: 130 QLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL 186
+ +G++P + RLP+ VG+ A M L +++ + + GL+ VV ++L
Sbjct: 140 RFADTHARVGLLPTWGLSVRLPQKVGIGLARRMSLTGDYLSAADALRAGLVTEVVPHDQL 199
Query: 187 LKVSRLWALDIAARRKPWIRSL----HRTD 212
L +R A I + +R+L HR D
Sbjct: 200 LGAARAVAASIVGNNQNAVRALLTSYHRID 229
>pdb|3QK8|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa15 From
Mycobacterium Marinum In Complex With An Unknown Ligand
pdb|3QK8|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase Echa15 From
Mycobacterium Marinum In Complex With An Unknown Ligand
pdb|3QK8|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase Echa15 From
Mycobacterium Marinum In Complex With An Unknown Ligand
pdb|3QK8|D Chain D, Crystal Structure Of Enoyl-Coa Hydratase Echa15 From
Mycobacterium Marinum In Complex With An Unknown Ligand
pdb|3QK8|E Chain E, Crystal Structure Of Enoyl-Coa Hydratase Echa15 From
Mycobacterium Marinum In Complex With An Unknown Ligand
pdb|3QK8|F Chain F, Crystal Structure Of Enoyl-Coa Hydratase Echa15 From
Mycobacterium Marinum In Complex With An Unknown Ligand
Length = 272
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 94/213 (44%), Gaps = 7/213 (3%)
Query: 4 PRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSG 63
P + E G GV + L +P +N++ + L D + DV+ +++ G G FS
Sbjct: 13 PSLRFEPGEHGVLNLVLDSPGLNSVGPQMHRDLADVWPVIDRDPDVRVVLVRGEGKAFSS 72
Query: 64 GFDINVFQKVHG--AGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCH 121
G + + G G + +M + +LV+NL+ + KP+ +
Sbjct: 73 GGSFELIDETIGDYEGRIRIMREAR-DLVLNLV-NLDKPVVSAIRGPAVGAGLVVALLAD 130
Query: 122 ARIAAPKTQLGLPELTLGVIPGTQR---LPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+A+ ++ LGV G P LVG++KA +L ++++ EE ++GL+
Sbjct: 131 ISVASATAKIIDGHTKLGVAAGDHAAICWPLLVGMAKAKYYLLTCETLSGEEAERIGLVS 190
Query: 179 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRT 211
V +E+L + A ++A + IR R+
Sbjct: 191 TCVDDDEVLPTATRLAENLAQGAQNAIRWTKRS 223
>pdb|2VX2|A Chain A, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
pdb|2VX2|B Chain B, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
pdb|2VX2|C Chain C, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
pdb|2VX2|D Chain D, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
pdb|2VX2|E Chain E, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
pdb|2VX2|F Chain F, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
pdb|2VX2|G Chain G, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
pdb|2VX2|H Chain H, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
pdb|2VX2|I Chain I, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
Length = 287
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 85/206 (41%), Gaps = 6/206 (2%)
Query: 4 PRVTMEVGNDGVAIITLINPPV-NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFS 62
PR T DG+ I L NP N L++ ++ L+ +D+K I+++ G FS
Sbjct: 32 PRPTSARQLDGIRNIVLSNPKKRNTLSLAMLKSLQSDILHDADSNDLKVIIISAEGPVFS 91
Query: 63 GGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHA 122
G D+ + G D + V+ I + P+ C
Sbjct: 92 SGHDLKELTEEQGR-DYHAEVFQTCSKVMMHIRNHPVPVIAMVNGLATAAGCQLVASCDI 150
Query: 123 RIAAPKTQLGLPELTLGVI---PGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDA 179
+A+ K+ P + +G+ PG L R V A+EM+ + I+++E GL+
Sbjct: 151 AVASDKSSFATPGVNVGLFCSTPGVA-LARAVPRKVALEMLFTGEPISAQEALLHGLLSK 209
Query: 180 VVTSEELLKVSRLWALDIAARRKPWI 205
VV EL + + A IA+ +P +
Sbjct: 210 VVPEAELQEETMRIARKIASLSRPVV 235
>pdb|3QYR|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa16_2
Mycobacterium Paratuberculosis Atcc Baa-968 K-10
pdb|3QYR|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase Echa16_2
Mycobacterium Paratuberculosis Atcc Baa-968 K-10
pdb|3QYR|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase Echa16_2
Mycobacterium Paratuberculosis Atcc Baa-968 K-10
pdb|3QYR|D Chain D, Crystal Structure Of Enoyl-Coa Hydratase Echa16_2
Mycobacterium Paratuberculosis Atcc Baa-968 K-10
pdb|3QYR|E Chain E, Crystal Structure Of Enoyl-Coa Hydratase Echa16_2
Mycobacterium Paratuberculosis Atcc Baa-968 K-10
pdb|3QYR|F Chain F, Crystal Structure Of Enoyl-Coa Hydratase Echa16_2
Mycobacterium Paratuberculosis Atcc Baa-968 K-10
Length = 253
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 88/210 (41%), Gaps = 27/210 (12%)
Query: 15 VAIITLINPPV-NALAIPIVAGLKDKF----EEATSRDDVKAIVLTGNGGRFSGGFDINV 69
V +TL P NAL+ A L+D+F +A + DDV +++TG F G D+
Sbjct: 18 VRTLTLNRPQARNALS----AALRDRFFGALADAETDDDVDVVIITGADPVFCAGLDLKE 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKT 129
G S +PD+S KP+ + C IA+
Sbjct: 74 L------GGSSALPDISPRWPA-----LTKPVIGAINGAAVTGGLELALYCDILIASENA 122
Query: 130 QLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL 186
+ +G++P + RLP+ VG+ A M L +++ + + GL+ VV ++L
Sbjct: 123 RFADTHARVGLLPTWGLSVRLPQKVGIGLARRMSLTGDYLSAADALRAGLVTEVVPHDQL 182
Query: 187 LKVSRLWALDIAARRKPWIRSL----HRTD 212
L ++ A I + +R+L HR D
Sbjct: 183 LGAAQAVAASIVGNNQNAVRALLASYHRID 212
>pdb|3QRE|A Chain A, Crystal Structure Of An Enoyl-Coa Hydratase Echa12_1 From
Mycobacterium Marinum
Length = 298
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 87/209 (41%), Gaps = 12/209 (5%)
Query: 6 VTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGG 64
V E GVAIIT +NA + AG + A + ++ IVLTG G F G
Sbjct: 31 VLYEATPGGVAIITFNRADRLNAWGPDLAAGFYAAIDRAEADPGIRVIVLTGRGRGFCAG 90
Query: 65 FDINVFQKVHG-------AGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXX 117
+ G A D +L D+ E + + +KP+
Sbjct: 91 AYLGSADAAAGYDKTMAKAKDANLA-DLVGERPPHFVTMLRKPVIAAINGPCVGIGLTQA 149
Query: 118 MGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKL 174
+ C R AA + G+I + LPRL + A++++L ++ +EE +L
Sbjct: 150 LMCDVRFAAAGAKFAAVFARRGLIAEFGISWILPRLTSWAVALDLLLSGRTFLAEEAAQL 209
Query: 175 GLIDAVVTSEELLKVSRLWALDIAARRKP 203
GL+ VVT E+L+ + +A DIA P
Sbjct: 210 GLVKEVVTPEQLMPRALEYAEDIARYCSP 238
>pdb|3P5M|A Chain A, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Avium
pdb|3P5M|B Chain B, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Avium
pdb|3P5M|C Chain C, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Avium
pdb|3P5M|D Chain D, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Avium
pdb|3P5M|E Chain E, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Avium
pdb|3P5M|F Chain F, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Avium
Length = 255
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 80/187 (42%), Gaps = 13/187 (6%)
Query: 8 MEVGNDGVAIITLINPP--VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
+ V +DG + ++ P +NA+ P++ L +A + + V+A++LTG G F G
Sbjct: 8 ISVEHDGAVLRIRLDRPEKLNAVDTPMLEELSVHIRDAEADESVRAVLLTGAGRAFCSGG 67
Query: 66 DINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIA 125
D+ + VV I KP+ + C +A
Sbjct: 68 DLTGGDTA--------GAADAANRVVRAITSLPKPVIAGVHGAAVGFGCSLALACDLVVA 119
Query: 126 APKTQLGLPELTLGVIP---GTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 182
AP + L +G++P + LP L+G ++ M + ++ I++ ++ G+I + +
Sbjct: 120 APASYFQLAFTRVGLMPDGGASALLPLLIGRARTSRMAMTAEKISAATAFEWGMISHITS 179
Query: 183 SEELLKV 189
++E V
Sbjct: 180 ADEYESV 186
>pdb|4FZW|C Chain C, Crystal Structure Of The Paaf-paag Hydratase-isomerase
Complex From E.coli
pdb|4FZW|D Chain D, Crystal Structure Of The Paaf-paag Hydratase-isomerase
Complex From E.coli
Length = 274
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 85/193 (44%), Gaps = 6/193 (3%)
Query: 14 GVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDIN--VF 70
GV +TL P +N+ + A L + ++ D ++ ++LTG G F G D+N
Sbjct: 24 GVMTLTLNRPERLNSFNDEMHAQLAECLKQVERDDTIRCLLLTGAGRGFCAGQDLNDRNV 83
Query: 71 QKVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQ 130
A D+ + + +V + KP+ +G IAA +
Sbjct: 84 DPTGPAPDLGMSVERFYNPLVRRLAKLPKPVICAVNGVAAGAGATLALGGDIVIAARSAK 143
Query: 131 LGLPELTLGVIP---GTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELL 187
+ LG+IP GT LPR+ G ++A+ + LL +++E+ + G+I VV E L
Sbjct: 144 FVMAFSKLGLIPDCGGTWLLPRVAGRARAMGLALLGNQLSAEQAHEWGMIWQVVDDETLA 203
Query: 188 KVSRLWALDIAAR 200
++ A +A +
Sbjct: 204 DTAQQLARHLATQ 216
>pdb|3PE8|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Smegmatis
Length = 256
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 90/211 (42%), Gaps = 19/211 (9%)
Query: 12 NDGVAIITLINPPV-NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVF 70
D V +TL P NAL+ + + +A + DDV +++TG F G D+
Sbjct: 16 TDRVRTLTLNRPQSRNALSAELRSTFFRALSDAQNDDDVDVVIVTGADPVFCAGLDLKEL 75
Query: 71 QKVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQ 130
GD + +PD+S + D KP+ + C IA+ +
Sbjct: 76 ------GDTTELPDISPKW-----PDMTKPVIGAINGAAVTGGLELALYCDILIASENAK 124
Query: 131 LGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELL 187
+G++P + RLP+ VG+ A M L +++++ + GL+ VV ++LL
Sbjct: 125 FADTHARVGLMPTWGLSVRLPQKVGVGLARRMSLTGDYLSAQDALRAGLVTEVVAHDDLL 184
Query: 188 KVSRLWALDIAARRKPWIRSL----HRTDKL 214
+R A I + +R+L HR D L
Sbjct: 185 TAARRVAASIVGNNQKAVRALLDSYHRIDAL 215
>pdb|4HC8|A Chain A, Crystal Structure Of Probable Enoyl-Coa Hydratase Echa3
(Rv0632c, Nysgrc-019494) From Mycobacterium Tuberculosis
H37rv
pdb|4HC8|B Chain B, Crystal Structure Of Probable Enoyl-Coa Hydratase Echa3
(Rv0632c, Nysgrc-019494) From Mycobacterium Tuberculosis
H37rv
Length = 255
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 92/223 (41%), Gaps = 24/223 (10%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
D +A+I+ + VNAL L + A RDDV A+V+TGNG FSGGFD+ K
Sbjct: 13 DSIAVISXDDGKVNALGPAXQQALNAAIDNA-DRDDVGALVITGNGRVFSGGFDL----K 67
Query: 73 VHGAGDVSLMPDV---SVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKT 129
+ +G+V D EL L+ K + G H R+AA
Sbjct: 68 ILTSGEVQPAIDXLRGGFELAYRLLSYPKPVVXACTGHAIAXGAFLLSCGDH-RVAAHAY 126
Query: 130 QLGLPELTLG-VIPGTQ------RLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 182
+ E+ +G IP RL R S + L+K+ E G ID +
Sbjct: 127 NIQANEVAIGXTIPYAALEIXKLRLTR----SAYQQATGLAKTFFGETALAAGFIDEIAL 182
Query: 183 SEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLK 225
E ++ + A + A + H KL S ++A ++
Sbjct: 183 PEVVVSRAEEAAREFAGLNQ----HAHAATKLRSRADALTAIR 221
>pdb|4EML|A Chain A, Synechocystis Sp. Pcc 6803
1,4-Dihydroxy-2-Naphthoyl-Coenzyme A Synthase (Menb) In
Complex With Bicarbonate
pdb|4EML|B Chain B, Synechocystis Sp. Pcc 6803
1,4-Dihydroxy-2-Naphthoyl-Coenzyme A Synthase (Menb) In
Complex With Bicarbonate
pdb|4EML|C Chain C, Synechocystis Sp. Pcc 6803
1,4-Dihydroxy-2-Naphthoyl-Coenzyme A Synthase (Menb) In
Complex With Bicarbonate
pdb|4EML|D Chain D, Synechocystis Sp. Pcc 6803
1,4-Dihydroxy-2-Naphthoyl-Coenzyme A Synthase (Menb) In
Complex With Bicarbonate
pdb|4EML|E Chain E, Synechocystis Sp. Pcc 6803
1,4-Dihydroxy-2-Naphthoyl-Coenzyme A Synthase (Menb) In
Complex With Bicarbonate
pdb|4EML|F Chain F, Synechocystis Sp. Pcc 6803
1,4-Dihydroxy-2-Naphthoyl-Coenzyme A Synthase (Menb) In
Complex With Bicarbonate
Length = 275
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 82/204 (40%), Gaps = 9/204 (4%)
Query: 14 GVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSG--GFDINVF 70
G+A I + P NA V L D F A + + ++LTG G G F
Sbjct: 19 GIAKIVINRPHKRNAFRPQTVFELYDAFCNAREDNRIGVVLLTGAGPHSDGKYAFCSGGD 78
Query: 71 QKVHGAG---DVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAP 127
Q V G G D P ++V + LI K + + C IAA
Sbjct: 79 QSVRGEGGYIDDQGTPRLNVLDLQRLIRSMPKVVIALVAGYAIGGGHVLHLVCDLTIAAD 138
Query: 128 KTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 184
G +G G + L R+VG KA E+ L + +++E ++G+++ VV +
Sbjct: 139 NAIFGQTGPKVGSFDGGFGSSYLARIVGQKKAREIWYLCRQYSAQEAERMGMVNTVVPVD 198
Query: 185 ELLKVSRLWALDIAARRKPWIRSL 208
L + WA +I ++ IR L
Sbjct: 199 RLEEEGIQWAKEILSKSPLAIRCL 222
>pdb|2EJ5|A Chain A, Crystal Structure Of Gk2038 Protein (Enoyl-Coa Hydratase
Subunit Ii) From Geobacillus Kaustophilus
pdb|2EJ5|B Chain B, Crystal Structure Of Gk2038 Protein (Enoyl-Coa Hydratase
Subunit Ii) From Geobacillus Kaustophilus
Length = 257
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 71/157 (45%), Gaps = 7/157 (4%)
Query: 15 VAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKV 73
VA +TL P +NA + A + ++A + +V+ +V+TG G F G D++ +
Sbjct: 13 VAWLTLNRPDQLNAFTEQMNAEVTKALKQAGADPNVRCVVITGAGRAFCAGEDLSGVTEE 72
Query: 74 HGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQLGL 133
GDV + ++ +E KP+ + C R+ + K
Sbjct: 73 MDHGDVLRSRYAPMMKALHHLE---KPVVAAVNGAAAGAGMSLALACDFRLLSEKASFAP 129
Query: 134 PELTLGVIPGTQRL---PRLVGLSKAIEMMLLSKSIT 167
+ +G++P L PRLVG +KA+E+ +L + +T
Sbjct: 130 AFIHVGLVPDAGHLYYLPRLVGRAKALELAVLGEKVT 166
>pdb|4F47|A Chain A, The Structure Of Enoyl-Coa Hydratase Echa19 From
Mycobacterium Marinum
Length = 278
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 87/205 (42%), Gaps = 8/205 (3%)
Query: 14 GVAIITLINPPV--NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
G +I +N P NAL+ ++ + + ++ + D++ +LTG GG F G D+
Sbjct: 28 GHTLIVTMNRPSRRNALSGEMMQIMVEAWDRVDNDPDIRCCILTGAGGYFCAGMDLKAAT 87
Query: 72 KVHGAGDVSLMPDVSVELVVNLIED--CKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKT 129
K GD + L++ KKP+ G R+AA
Sbjct: 88 K-KPPGDSFKDGSYDPSRIDALLKGRRLKKPLIAAVEGPAIAGGTEILQGTDIRVAAESA 146
Query: 130 QLGLPELTLGVIP---GTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL 186
+ G+ E + P RL R + + A +++L + IT+ E ++GL+ VV +
Sbjct: 147 KFGISEAKWSLYPMGGSAVRLVRQIPYTVACDLLLTGRHITAAEAKEMGLVGHVVPDGQA 206
Query: 187 LKVSRLWALDIAARRKPWIRSLHRT 211
L + A IAA ++++ RT
Sbjct: 207 LTKALEIAEIIAANGPLAVQAILRT 231
>pdb|3R0O|A Chain A, Crystal Structure Of Carnitinyl-Coa Hydratase From
Mycobacterium Avium
pdb|3R0O|B Chain B, Crystal Structure Of Carnitinyl-Coa Hydratase From
Mycobacterium Avium
pdb|3R0O|C Chain C, Crystal Structure Of Carnitinyl-Coa Hydratase From
Mycobacterium Avium
Length = 273
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 77/183 (42%), Gaps = 30/183 (16%)
Query: 15 VAIITLINPPV-NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR-FSGGFDI----- 67
VA+IT+ P NA+ + + D EEA +V A+V+TG G + F G D+
Sbjct: 25 VALITIDRPDARNAVNGAVSTAVGDALEEAQRDPEVWAVVITGAGDKSFCAGADLKAISR 84
Query: 68 --NVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIA 125
N++ H P+ V+ D KP + IA
Sbjct: 85 GENLYHAEH--------PEWGFAGYVHHFID--KPTIAAVNGTALGGGSELALASDLVIA 134
Query: 126 APKTQLGLPELTLGVIPGT-------QRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
GLPE+ G+I G ++LPR V A+E++L + +T+ + + GLI+
Sbjct: 135 CESASFGLPEVKRGLIAGAGGVFRIVEQLPRKV----ALELVLTGEPMTASDALRWGLIN 190
Query: 179 AVV 181
VV
Sbjct: 191 EVV 193
>pdb|3R9Q|A Chain A, Structure Of A Probable Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Abscessus Atcc 19977 DSM 44196
pdb|3R9Q|B Chain B, Structure Of A Probable Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Abscessus Atcc 19977 DSM 44196
pdb|3R9Q|C Chain C, Structure Of A Probable Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Abscessus Atcc 19977 DSM 44196
Length = 262
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 77/185 (41%), Gaps = 7/185 (3%)
Query: 26 NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDV 85
NA+ P A L F E + + VL G+ G F G D+ G L P
Sbjct: 33 NAVDGPTAAALLAAFTEFDADPEASVAVLWGDNGTFCAGADLKAMGTDRGN---ELHPHG 89
Query: 86 SVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQLGLPELTLGVI---P 142
+ + + KP+ + C R+ LG+ GV
Sbjct: 90 PGPMGPSRLR-LSKPVIAAISGHAVAGGIELALWCDLRVVEEDAVLGVFCRRWGVPLIDG 148
Query: 143 GTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRK 202
GT RLPRL+G S+A++++L + + + E +GL++ VV + + + A +IAA +
Sbjct: 149 GTIRLPRLIGHSRAMDLILTGRPVHANEALDIGLVNRVVARGQAREAAETLAAEIAAFPQ 208
Query: 203 PWIRS 207
+R+
Sbjct: 209 QCVRA 213
>pdb|1WZ8|A Chain A, Crystal Structure Of Probable Enoyl-Coa Dehydratase From
Thermus Thermophilus Hb8
pdb|1WZ8|B Chain B, Crystal Structure Of Probable Enoyl-Coa Dehydratase From
Thermus Thermophilus Hb8
pdb|1WZ8|C Chain C, Crystal Structure Of Probable Enoyl-Coa Dehydratase From
Thermus Thermophilus Hb8
pdb|1WZ8|D Chain D, Crystal Structure Of Probable Enoyl-Coa Dehydratase From
Thermus Thermophilus Hb8
pdb|1WZ8|E Chain E, Crystal Structure Of Probable Enoyl-Coa Dehydratase From
Thermus Thermophilus Hb8
pdb|1WZ8|F Chain F, Crystal Structure Of Probable Enoyl-Coa Dehydratase From
Thermus Thermophilus Hb8
Length = 264
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 84/190 (44%), Gaps = 7/190 (3%)
Query: 14 GVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKV 73
GV IT +NA+ + GL + + + + V+A++L G GG FS G + +++
Sbjct: 20 GVLEITFRGEKLNAMPPALHRGLARVWRDLEAVEGVRAVLLRGEGGVFSAGGSFGLIEEM 79
Query: 74 HGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQLGL 133
+ + L +V + +P+ + + T+L
Sbjct: 80 RASHEALLRVFWEARDLVLGPLNFPRPVVAAVEKVAVGAGLALALAADIAVVGKGTRLLD 139
Query: 134 PELTLGVIPGTQRL---PRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVS 190
L LGV G + P LVG++KA +LL++ +T EE +LGL+ V E++ +
Sbjct: 140 GHLRLGVAAGDHAVLLWPLLVGMAKAKYHLLLNEPLTGEEAERLGLVALAVEDEKVYEK- 198
Query: 191 RLWALDIAAR 200
AL++A R
Sbjct: 199 ---ALEVAER 205
>pdb|2A7K|A Chain A, Carboxymethylproline Synthase (carb) From Pectobacterium
Carotovora, Apo Enzyme
pdb|2A7K|B Chain B, Carboxymethylproline Synthase (carb) From Pectobacterium
Carotovora, Apo Enzyme
pdb|2A7K|C Chain C, Carboxymethylproline Synthase (carb) From Pectobacterium
Carotovora, Apo Enzyme
pdb|2A7K|D Chain D, Carboxymethylproline Synthase (carb) From Pectobacterium
Carotovora, Apo Enzyme
pdb|2A7K|E Chain E, Carboxymethylproline Synthase (carb) From Pectobacterium
Carotovora, Apo Enzyme
pdb|2A7K|F Chain F, Carboxymethylproline Synthase (carb) From Pectobacterium
Carotovora, Apo Enzyme
pdb|2A7K|G Chain G, Carboxymethylproline Synthase (carb) From Pectobacterium
Carotovora, Apo Enzyme
pdb|2A7K|H Chain H, Carboxymethylproline Synthase (carb) From Pectobacterium
Carotovora, Apo Enzyme
pdb|2A7K|I Chain I, Carboxymethylproline Synthase (carb) From Pectobacterium
Carotovora, Apo Enzyme
pdb|2A81|A Chain A, Carboxymethylproline Synthase (Carb) From Pectobacterium
Carotovora, Complexed With Acetyl Coa And Bicine
pdb|2A81|B Chain B, Carboxymethylproline Synthase (Carb) From Pectobacterium
Carotovora, Complexed With Acetyl Coa And Bicine
pdb|2A81|C Chain C, Carboxymethylproline Synthase (Carb) From Pectobacterium
Carotovora, Complexed With Acetyl Coa And Bicine
Length = 250
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 97/243 (39%), Gaps = 23/243 (9%)
Query: 6 VTMEVGNDGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR-FSG 63
+ E +D V +ITL +P N + + +KD A + D V+A+V+ G R FS
Sbjct: 1 MVFEENSDEVRVITLDHPNKHNPFSRTLETSVKDALARANADDSVRAVVVYGGAERSFSA 60
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHAR 123
G D N +++ + D+ D ++L ++ + KP + R
Sbjct: 61 GGDFNEVKQLSRSEDIEEWIDRVIDLYQAVL-NVNKPTIAAVDGYAIGMGFQFALMFDQR 119
Query: 124 IAAPKTQLGLPELT--LGVIPGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVV 181
+ A +PEL +G G L G S E++ +S+ + L++ VV
Sbjct: 120 LMASTANFVMPELKHGIGCSVGAAILGFTHGFSTMQEIIYQCQSLDAPRCVDYRLVNQVV 179
Query: 182 TSEELLKVSRLWALDIA------------ARRKPWIRSLHRTDKLGSLSEAREVLKLARL 229
S LL + A +A A KP+I L +T +A + + A
Sbjct: 180 ESSALLDAAITQAHVMASYPASAFINTKRAVNKPFIHLLEQT------RDASKAVHKAAF 233
Query: 230 QAK 232
QA+
Sbjct: 234 QAR 236
>pdb|3F3S|A Chain A, The Crystal Structure Of Human Lambda-Crystallin, Cryl1
pdb|3F3S|B Chain B, The Crystal Structure Of Human Lambda-Crystallin, Cryl1
Length = 313
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 100/248 (40%), Gaps = 12/248 (4%)
Query: 308 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD-KA 366
V ++G G++G A V L ++ + + ++ I ++ L G L
Sbjct: 6 VVIVGSGVIGRSWAMLFASGGFQVKLYDIEQQQIRNALENIRKEMKLLEQAGSLKGSLSV 65
Query: 367 NNALKMLKGVLDYSEFKDVDMVI-EAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL 425
L ++ G + E + M I E V E + LK+KIF++L+ IL+++TS +
Sbjct: 66 EEQLSLISGCPNIQEAVEGAMHIQECVPEDLELKKKIFAQLDSIIDDRVILSSSTSCLMP 125
Query: 426 NIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV---RTERTSAQVILDLMTXXXXXXXXXXX 482
+ + + I AH +P + +PL+E+V T T+ LM
Sbjct: 126 SKLFAGLVHVKQCIVAHPVNPPYYIPLVELVPHPETAPTTVDRTHALMK--KIGQCPMRV 183
Query: 483 XXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLP-----IGPFQLLDLAGY 537
GF +NR + A LV G+ + S GL IGP + + L
Sbjct: 184 QKEVAGFVLNRLQYAIISEAWRLVEEGIVSPSDLDLVMSEGLGMRYAFIGPLETMHLNAE 243
Query: 538 GVAAATSK 545
G+ + +
Sbjct: 244 GMLSYCDR 251
>pdb|3L3S|A Chain A, Crystal Structure Of An Enoyl-Coa HydrotaseISOMERASE
FAMILY Protein From Silicibacter Pomeroyi
pdb|3L3S|B Chain B, Crystal Structure Of An Enoyl-Coa HydrotaseISOMERASE
FAMILY Protein From Silicibacter Pomeroyi
pdb|3L3S|C Chain C, Crystal Structure Of An Enoyl-Coa HydrotaseISOMERASE
FAMILY Protein From Silicibacter Pomeroyi
pdb|3L3S|D Chain D, Crystal Structure Of An Enoyl-Coa HydrotaseISOMERASE
FAMILY Protein From Silicibacter Pomeroyi
pdb|3L3S|E Chain E, Crystal Structure Of An Enoyl-Coa HydrotaseISOMERASE
FAMILY Protein From Silicibacter Pomeroyi
pdb|3L3S|F Chain F, Crystal Structure Of An Enoyl-Coa HydrotaseISOMERASE
FAMILY Protein From Silicibacter Pomeroyi
pdb|3L3S|G Chain G, Crystal Structure Of An Enoyl-Coa HydrotaseISOMERASE
FAMILY Protein From Silicibacter Pomeroyi
pdb|3L3S|H Chain H, Crystal Structure Of An Enoyl-Coa HydrotaseISOMERASE
FAMILY Protein From Silicibacter Pomeroyi
pdb|3L3S|I Chain I, Crystal Structure Of An Enoyl-Coa HydrotaseISOMERASE
FAMILY Protein From Silicibacter Pomeroyi
pdb|3L3S|J Chain J, Crystal Structure Of An Enoyl-Coa HydrotaseISOMERASE
FAMILY Protein From Silicibacter Pomeroyi
pdb|3L3S|K Chain K, Crystal Structure Of An Enoyl-Coa HydrotaseISOMERASE
FAMILY Protein From Silicibacter Pomeroyi
pdb|3L3S|L Chain L, Crystal Structure Of An Enoyl-Coa HydrotaseISOMERASE
FAMILY Protein From Silicibacter Pomeroyi
Length = 263
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 77/210 (36%), Gaps = 18/210 (8%)
Query: 9 EVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDIN 68
EV ++GV +TL P + L+ +A L D A D V +V+ G G F G D+
Sbjct: 11 EVLSEGVLTLTLGRAPAHPLSRAXIAALHDALRRAXGDDHVHVLVIHGPGRIFCAGHDLK 70
Query: 69 VFQKVHGAGDVSLMPDVSVELVVNLIE----------DCKKPIXXXXXXXXXXXXXXXXM 118
+ H A PD V +L E C KP
Sbjct: 71 EIGR-HRAD-----PDEGRAFVTDLFEACSALXLDLAHCPKPTIALVEGIATAAGLQLXA 124
Query: 119 GCHARIAAPKTQLGLPELTLGVIPGTQRLP--RLVGLSKAIEMMLLSKSITSEEGWKLGL 176
C A+P + LP + G T + R++G E L + ++ GL
Sbjct: 125 ACDLAYASPAARFCLPGVQNGGFXTTPAVAVSRVIGRRAVTEXALTGATYDADWALAAGL 184
Query: 177 IDAVVTSEELLKVSRLWALDIAARRKPWIR 206
I+ ++ L A +AAR + +R
Sbjct: 185 INRILPEAALATHVADLAGALAARNQAPLR 214
>pdb|1UIY|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Thermus
Thermophilus Hb8
Length = 253
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 88/197 (44%), Gaps = 6/197 (3%)
Query: 6 VTMEVGNDGVAIITLINPPV-NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGG 64
V +E G+ VA++ L +P N L+ L ++ + V+A+VLTG G FS G
Sbjct: 2 VQVEKGH--VAVVFLNDPERRNPLSPEXALSLLQALDDLEADPGVRAVVLTGRGKAFSAG 59
Query: 65 FDINVFQKVHGAG-DVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHAR 123
D+ ++V G + + +S+ + + + KP + C
Sbjct: 60 ADLAFLERVTELGAEENYRHSLSLXRLFHRVYTYPKPTVAAVNGPAVAGGAGLALACDLV 119
Query: 124 IAAPKTQLGLPELTLGVIPG--TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVV 181
+ + +LG E+ +G + + L R VG A +++L + + + E LGL++ +
Sbjct: 120 VXDEEARLGYTEVKIGFVAALVSVILVRAVGEKAAKDLLLTGRLVEAREAKALGLVNRIA 179
Query: 182 TSEELLKVSRLWALDIA 198
+ L+ ++ A ++A
Sbjct: 180 PPGKALEEAKALAEEVA 196
>pdb|3QMJ|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa8_6 From
Mycobacterium Marinum
Length = 256
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 86/205 (41%), Gaps = 16/205 (7%)
Query: 6 VTMEVGNDG-VAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSG 63
VT+++ +D V +TL P +NA + +A V ++LTG+G FS
Sbjct: 6 VTLQIDDDNRVRTLTLNRPEALNAFNEALYDATAQALLDAADDPQVAVVLLTGSGRGFSA 65
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXX-------XXXXXXXXXX 116
G D+ Q + S ++ + KP+
Sbjct: 66 GTDLAEMQARITDPNFS-EGKFGFRGLIKALAGFPKPLICAVNGLGVGIGATILGYADLA 124
Query: 117 XMGCHARIAAPKTQLGL-PELTLGVIPGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLG 175
M AR+ P T LG+ PE + LP+LVG A +++ S+ I +EE ++G
Sbjct: 125 FMSSTARLKCPFTSLGVAPEAASSYL-----LPQLVGRQNAAWLLMSSEWIDAEEALRMG 179
Query: 176 LIDAVVTSEELLKVSRLWALDIAAR 200
L+ + + EELL +R A +AA+
Sbjct: 180 LVWRICSPEELLPEARRHAEILAAK 204
>pdb|3I47|A Chain A, Crystal Structure Of Putative Enoyl Coa HydrataseISOMERASE
(Crotonase) From Legionella Pneumophila Subsp.
Pneumophila Str. Philadelphia 1
Length = 268
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 75/179 (41%), Gaps = 9/179 (5%)
Query: 26 NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDV 85
NA ++ ++ + + A + +V+ IVL NG FS G D+ Q + + + D
Sbjct: 26 NAFDNQLLTEMRIRLDSAINDTNVRVIVLKANGKHFSAGADLTWMQSMANFTEEENLEDS 85
Query: 86 SVELVVNL---IEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQLGLPELTLGVIP 142
V + NL I KP C IA+ + E+ LG+IP
Sbjct: 86 LV--LGNLMYSISQSPKPTIAMVQGAAFGGGAGLAAACDIAIASTSARFCFSEVKLGLIP 143
Query: 143 G--TQRLPRLVGLSKAIEMMLLSKSI-TSEEGWKLGLIDAVVTSEELLKVSRLWALDIA 198
+ + R +G +A +M+ +S + + + L L+ V + LL+ + +A I+
Sbjct: 144 AVISPYVVRAIG-ERAAKMLFMSAEVFDATRAYSLNLVQHCVPDDTLLEFTLKYASQIS 201
>pdb|3SWX|A Chain A, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3SWX|B Chain B, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3SWX|C Chain C, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
Length = 265
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 80/203 (39%), Gaps = 9/203 (4%)
Query: 7 TMEVGNDGVAIITLINPPV--NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGG 64
T+ + DG ++ +N P NA ++ L E + D++A VL G G F+ G
Sbjct: 10 TLRIRRDGYVLVIGLNRPAKRNAFDKTMLEELALALGEYETDTDLRAAVLYGEGPLFTAG 69
Query: 65 FDI-NVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHAR 123
D+ +V ++ G SL P+ + KP+ +
Sbjct: 70 LDLASVAAEIQGG--ASLTPEGGINPWQVDGRQLSKPLLVAVHGKVLTLGIELALAADIV 127
Query: 124 IAAPKTQLGLPELTLGVIP---GTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAV 180
IA E+ G+ P T R PR G A+ ML + + + E ++G++ +
Sbjct: 128 IADETATFAQLEVNRGIYPFGGATIRFPRTAGWGNAMRWMLTADTFDAVEAHRIGIVQEI 187
Query: 181 VTSEELLKVSRLWALDIAARRKP 203
V E + + A I AR+ P
Sbjct: 188 VPVGEHVDTAIAIAQTI-ARQAP 209
>pdb|3R9T|A Chain A, Structure Of Echa1_1 From Mycobacterium Paratuberculosis
Atcc Baa-968 K-10
pdb|3R9T|B Chain B, Structure Of Echa1_1 From Mycobacterium Paratuberculosis
Atcc Baa-968 K-10
pdb|3R9T|C Chain C, Structure Of Echa1_1 From Mycobacterium Paratuberculosis
Atcc Baa-968 K-10
Length = 267
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 76/185 (41%), Gaps = 30/185 (16%)
Query: 15 VAIITLINPPV-NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR-FSGGFDI----- 67
V +IT+ P NA+ + G+ D EEA +V+A+VLTG G + F G D+
Sbjct: 19 VMVITINRPEARNAINAAVSIGVGDALEEAQHDPEVRAVVLTGAGDKSFCAGADLKAIAR 78
Query: 68 --NVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIA 125
N++ H P+ V D KP + +A
Sbjct: 79 RENLYHPDH--------PEWGFAGYVRHFID--KPTIAAVNGTALGGGTELALASDLVVA 128
Query: 126 APKTQLGLPELTLGVIPG-------TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ Q GLPE+ G+I ++LPR V A+ ++L + +++ GLI+
Sbjct: 129 DERAQFGLPEVKRGLIAAAGGVFRIAEQLPRKV----AMRLLLTGEPLSAAAARDWGLIN 184
Query: 179 AVVTS 183
VV +
Sbjct: 185 EVVEA 189
>pdb|3R9S|A Chain A, Structure Of A Carnitinyl-Coa Dehydratase From
Mycobacterium Avium 104
pdb|3R9S|B Chain B, Structure Of A Carnitinyl-Coa Dehydratase From
Mycobacterium Avium 104
pdb|3R9S|C Chain C, Structure Of A Carnitinyl-Coa Dehydratase From
Mycobacterium Avium 104
Length = 267
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 76/185 (41%), Gaps = 30/185 (16%)
Query: 15 VAIITLINPPV-NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR-FSGGFDI----- 67
V +IT+ P NA+ + G+ D EEA +V+A+VLTG G + F G D+
Sbjct: 19 VMVITINRPEARNAVNAAVSIGVGDALEEAQHDPEVRAVVLTGAGDKSFCAGADLKAIAR 78
Query: 68 --NVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIA 125
N++ H P+ V D KP + +A
Sbjct: 79 RENLYHPDH--------PEWGFAGYVRHFID--KPTIAAVNGTALGGGTELALASDLVVA 128
Query: 126 APKTQLGLPELTLGVIPG-------TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 178
+ Q GLPE+ G+I ++LPR V A+ ++L + +++ GLI+
Sbjct: 129 DERAQFGLPEVKRGLIAAAGGVFRIAEQLPRKV----AMRLLLTGEPLSAAAARDWGLIN 184
Query: 179 AVVTS 183
VV +
Sbjct: 185 EVVEA 189
>pdb|3OC7|A Chain A, Crystal Structure Of An Enoyl-Coa Hydratase From
Mycobacterium Avium
Length = 267
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 76/181 (41%), Gaps = 14/181 (7%)
Query: 15 VAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKV 73
VA +TL +P NAL+ +V+ L +A+S V+ +VL GG F G D++ +
Sbjct: 21 VARLTLNSPHNRNALSTALVSQLHQGLRDASSDPAVRVVVLAHTGGTFCAGADLS---EA 77
Query: 74 HGAGDVSLMPDVSVE------LVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAP 127
G S D++VE ++ I + + P+ C +A P
Sbjct: 78 GSGGSPSSAYDMAVERAREMAALMRAIVESRLPVIAAIDGHVRAGGFGLVGACDIAVAGP 137
Query: 128 KTQLGLPELTLGVIPGTQRLPRLVGLS--KAIEMMLLSKSITSEEGWKLGLIDAVVTSEE 185
++ L E +GV P L L LS A L + + ++GLI + +E+
Sbjct: 138 RSSFALTEARIGVAPAIISLTLLPKLSARAAARYYLTGEKFDARRAEEIGLI--TMAAED 195
Query: 186 L 186
L
Sbjct: 196 L 196
>pdb|1SG4|A Chain A, Crystal Structure Of Human Mitochondrial Delta3-delta2-
Enoyl-coa Isomerase
pdb|1SG4|B Chain B, Crystal Structure Of Human Mitochondrial Delta3-delta2-
Enoyl-coa Isomerase
pdb|1SG4|C Chain C, Crystal Structure Of Human Mitochondrial Delta3-delta2-
Enoyl-coa Isomerase
Length = 260
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 76/183 (41%), Gaps = 16/183 (8%)
Query: 14 GVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNG-GRFSGGFDINVF-- 70
GVA++ NPPVN+L++ + L E+ + + ++LT + G FS G D+
Sbjct: 14 GVAVMKFKNPPVNSLSLEFLTELVISLEKLENDKSFRGVILTSDRPGVFSAGLDLTEMCG 73
Query: 71 -QKVHGAGDVSLMPDVSVELV-VNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAA-- 126
H AG + ++ + L NL+ + + C RI A
Sbjct: 74 RSPAHYAGYWKAVQELWLRLYQSNLV------LVSAINGACPAGGCLVALTCDYRILADN 127
Query: 127 PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS 183
P+ +GL E LG+I L +G A + L E ++G++D VV
Sbjct: 128 PRYCIGLNETQLGIIAPFWLKDTLENTIGHRAAERALQLGLLFPPAEALQVGIVDQVVPE 187
Query: 184 EEL 186
E++
Sbjct: 188 EQV 190
>pdb|3TLF|A Chain A, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3TLF|B Chain B, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3TLF|C Chain C, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3TLF|D Chain D, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3TLF|E Chain E, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3TLF|F Chain F, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
Length = 274
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 87/197 (44%), Gaps = 19/197 (9%)
Query: 7 TMEVGNDG-VAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGG 64
T++ DG A ITL P +NAL+ ++ L+ + EA + D V +V+TG G F G
Sbjct: 12 TIKYEVDGHTATITLNRPDALNALSPHMITELRAAYHEAENDDRVWLLVVTGTGRAFCSG 71
Query: 65 FDIN--------VFQKVH-GAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXX 115
D+ ++++ + D P + KP+
Sbjct: 72 ADVKEIPEDGKVIYERPYLSTYDQWEAPQEGTPPFRTM----AKPVLTAVNGICCGAGMD 127
Query: 116 XXMGCHARIAAPKTQLGLPELTLGVIPGTQ--RLPRLVGLSKAIEMMLLSKS--ITSEEG 171
IA+ + P +++G++ G + R+ R++ S A+ M L+ K ++++
Sbjct: 128 WVTTTDIVIASEQATFFDPHVSIGLVAGRELVRVSRVLPRSIALRMALMGKHERMSAQRA 187
Query: 172 WKLGLIDAVVTSEELLK 188
++LGLI +V + LL+
Sbjct: 188 YELGLISEIVEHDRLLE 204
>pdb|3HE2|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Tuberculosis
pdb|3HE2|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Tuberculosis
pdb|3HE2|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Tuberculosis
Length = 264
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 71/176 (40%), Gaps = 15/176 (8%)
Query: 26 NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDV 85
NAL +V L +A +AIVLTG G F G D++ G + PD
Sbjct: 43 NALNSQLVEELTQAIRKAGD-GSARAIVLTGQGTAFCAGADLS------GDAFAADYPDR 95
Query: 86 SVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQLGLPELTLGVI---P 142
+EL ++ P+ M C R+ AP P G+
Sbjct: 96 LIEL-HKAMDASPMPVVGAINGPAIGAGLQLAMQCDLRVVAPDAFFQFPTSKYGLALDNW 154
Query: 143 GTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIA 198
+RL LVG +A M+L ++ +T+E G+ + + T L ++ WA +IA
Sbjct: 155 SIRRLSSLVGHGRARAMLLSAEKLTAEIALHTGMANRIGT----LADAQAWAAEIA 206
>pdb|2VSU|C Chain C, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase
( Hchl) With Acetyl-Coenzyme A And Vanillin Gives
Insights Into Substrate Specificity And Mechanism
Length = 275
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 76/185 (41%), Gaps = 7/185 (3%)
Query: 13 DGVAIITLINPPV-NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DG+A + L P NA++ + + D E +VLTG G ++ G D+ +
Sbjct: 17 DGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGMDLKEYF 76
Query: 72 KVHGAGDVSLMPDVSVE---LVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPK 128
+ AG L + E L+ KP + C I A +
Sbjct: 77 REVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFAPLVACDLAICADE 136
Query: 129 TQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEE 185
GL E+ G+ PG ++ + VG +++ ++ K+ ++ ++GL++ V +
Sbjct: 137 ATFGLSEINWGIPPGNLVSKAMADTVGHRQSLYYIMTGKTFGGQKAAEMGLVNESVPLAQ 196
Query: 186 LLKVS 190
L +V+
Sbjct: 197 LREVT 201
>pdb|2J5I|B Chain B, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|C Chain C, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|D Chain D, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|E Chain E, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|F Chain F, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|G Chain G, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|H Chain H, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|J Chain J, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|K Chain K, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|L Chain L, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2VSS|A Chain A, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex
With Acetyl-Coa And Vanillin
pdb|2VSS|B Chain B, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex
With Acetyl-Coa And Vanillin
pdb|2VSS|C Chain C, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex
With Acetyl-Coa And Vanillin
pdb|2VSS|D Chain D, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex
With Acetyl-Coa And Vanillin
Length = 276
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 76/185 (41%), Gaps = 7/185 (3%)
Query: 13 DGVAIITLINPPV-NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DG+A + L P NA++ + + D E +VLTG G ++ G D+ +
Sbjct: 17 DGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGMDLKEYF 76
Query: 72 KVHGAGDVSLMPDVSVE---LVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPK 128
+ AG L + E L+ KP + C I A +
Sbjct: 77 REVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFSPLVACDLAICADE 136
Query: 129 TQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEE 185
GL E+ G+ PG ++ + VG +++ ++ K+ ++ ++GL++ V +
Sbjct: 137 ATFGLSEINWGIPPGNLVSKAMADTVGHRQSLYYIMTGKTFGGQKAAEMGLVNESVPLAQ 196
Query: 186 LLKVS 190
L +V+
Sbjct: 197 LREVT 201
>pdb|2J5I|I Chain I, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
Length = 276
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 76/185 (41%), Gaps = 7/185 (3%)
Query: 13 DGVAIITLINPPV-NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DG+A + L P NA++ + + D E +VLTG G ++ G D+ +
Sbjct: 17 DGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGMDLKEYF 76
Query: 72 KVHGAGDVSLMPDVSVE---LVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPK 128
+ AG L + E L+ KP + C I A +
Sbjct: 77 REVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFSPLVACDLAICADE 136
Query: 129 TQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEE 185
GL E+ G+ PG ++ + VG +++ ++ K+ ++ ++GL++ V +
Sbjct: 137 ATFGLSEINWGIPPGNLVSKAMADTVGHRQSLYYIMTGKTFGGQKAAEMGLVNESVPLAQ 196
Query: 186 LLKVS 190
L +V+
Sbjct: 197 LREVT 201
>pdb|2VSU|E Chain E, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase
( Hchl) With Acetyl-Coenzyme A And Vanillin Gives
Insights Into Substrate Specificity And Mechanism
Length = 276
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 76/185 (41%), Gaps = 7/185 (3%)
Query: 13 DGVAIITLINPPV-NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DG+A + L P NA++ + + D E +VLTG G ++ G D+ +
Sbjct: 17 DGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGMDLKEYF 76
Query: 72 KVHGAGDVSLMPDVSVE---LVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPK 128
+ AG L + E L+ KP + C I A +
Sbjct: 77 REVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFAPLVACDLAICADE 136
Query: 129 TQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEE 185
GL E+ G+ PG ++ + VG +++ ++ K+ ++ ++GL++ V +
Sbjct: 137 ATFGLSEINYGIPPGNLVSKAMADTVGHRQSLYYIMTGKTFGGQKAAEMGLVNESVPLAQ 196
Query: 186 LLKVS 190
L +V+
Sbjct: 197 LREVT 201
>pdb|2VSS|F Chain F, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex
With Acetyl-Coa And Vanillin
Length = 276
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 76/185 (41%), Gaps = 7/185 (3%)
Query: 13 DGVAIITLINPPV-NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DG+A + L P NA++ + + D E +VLTG G ++ G D+ +
Sbjct: 17 DGIAFVILNRPERRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGMDLKEYF 76
Query: 72 KVHGAGDVSLMPDVSVE---LVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPK 128
+ AG L + E L+ KP + C I A +
Sbjct: 77 REVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFSPLVACDLAICADE 136
Query: 129 TQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEE 185
GL E+ G+ PG ++ + VG +++ ++ K+ ++ ++GL++ V +
Sbjct: 137 ATFGLSEINWGIPPGNLVSKAMADTVGHRQSLYYIMTGKTFGGQKAAEMGLVNESVPLAQ 196
Query: 186 LLKVS 190
L +V+
Sbjct: 197 LREVT 201
>pdb|2VSU|A Chain A, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase
( Hchl) With Acetyl-Coenzyme A And Vanillin Gives
Insights Into Substrate Specificity And Mechanism.
pdb|2VSU|B Chain B, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase
( Hchl) With Acetyl-Coenzyme A And Vanillin Gives
Insights Into Substrate Specificity And Mechanism.
pdb|2VSU|D Chain D, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase
( Hchl) With Acetyl-Coenzyme A And Vanillin Gives
Insights Into Substrate Specificity And Mechanism
Length = 276
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 76/185 (41%), Gaps = 7/185 (3%)
Query: 13 DGVAIITLINPPV-NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DG+A + L P NA++ + + D E +VLTG G ++ G D+ +
Sbjct: 17 DGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGMDLKEYF 76
Query: 72 KVHGAGDVSLMPDVSVE---LVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPK 128
+ AG L + E L+ KP + C I A +
Sbjct: 77 REVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFAPLVACDLAICADE 136
Query: 129 TQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEE 185
GL E+ G+ PG ++ + VG +++ ++ K+ ++ ++GL++ V +
Sbjct: 137 ATFGLSEINWGIPPGNLVSKAMADTVGHRQSLYYIMTGKTFGGQKAAEMGLVNESVPLAQ 196
Query: 186 LLKVS 190
L +V+
Sbjct: 197 LREVT 201
>pdb|2VSS|E Chain E, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex
With Acetyl-Coa And Vanillin
Length = 276
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 76/185 (41%), Gaps = 7/185 (3%)
Query: 13 DGVAIITLINPPV-NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DG+A + L P NA++ + + D E +VLTG G ++ G D+ +
Sbjct: 17 DGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGMDLKEYF 76
Query: 72 KVHGAGDVSLMPDVSVE---LVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPK 128
+ AG L + E L+ KP + C I A +
Sbjct: 77 REVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFSPLVACDLAICADE 136
Query: 129 TQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEE 185
GL E+ G+ PG ++ + VG +++ ++ K+ ++ ++GL++ V +
Sbjct: 137 ATFGLSEINYGIPPGNLVSKAMADTVGHRQSLYYIMTGKTFGGQKAAEMGLVNESVPLAQ 196
Query: 186 LLKVS 190
L +V+
Sbjct: 197 LREVT 201
>pdb|3ADO|A Chain A, Crystal Structure Of The Rabbit L-Gulonate 3-Dehydrogenase
pdb|3ADP|A Chain A, Crystal Structure Of The Rabbit L-Gulonate 3-Dehydrogenase
(
Length = 319
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 99/241 (41%), Gaps = 10/241 (4%)
Query: 308 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD-KA 366
V ++G GL+G A V L ++ + ++ I ++ L G L A
Sbjct: 9 VLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSA 68
Query: 367 NNALKMLKGVLDYSE-FKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL 425
L ++ + +E + V + E V E++ LK+KIF++L+ +L++++S +
Sbjct: 69 EEQLSLISSCTNLAEAVEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCLLP 128
Query: 426 NIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTS-AQVILDLMTXXXXXXXXXXXXX 484
+ + + + I AH +P + +PL+E+V TS A V
Sbjct: 129 SKLFTGLAHVKQCIVAHPVNPPYYIPLVELVPHPETSPATVDRTHALMRKIGQSPVRVLK 188
Query: 485 NCTGFAVNRAFFPYSQSARLLVSLGV------DVFRIDSAIRSFGLPIGPFQLLDLAGYG 538
GF +NR + A LV G+ D+ D + IGP + + L G
Sbjct: 189 EIDGFVLNRLQYAIISEAWRLVEEGIVSPSDLDLVMSDGLGMRYAF-IGPLETMHLNAEG 247
Query: 539 V 539
+
Sbjct: 248 M 248
>pdb|2VRE|A Chain A, Crystal Structure Of Human Peroxisomal Delta3,5,
Delta2,4-Dienoyl Coa Isomerase
pdb|2VRE|B Chain B, Crystal Structure Of Human Peroxisomal Delta3,5,
Delta2,4-Dienoyl Coa Isomerase
pdb|2VRE|C Chain C, Crystal Structure Of Human Peroxisomal Delta3,5,
Delta2,4-Dienoyl Coa Isomerase
Length = 296
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 71/157 (45%), Gaps = 14/157 (8%)
Query: 45 SRD-DVKAIVLTGNGGRFSGGFDI-----NVFQ-KVHGAGDVS-LMPDV--SVELVVNLI 94
SRD D +A+V++G G F+ G D+ ++ Q K +S + D+ + N+I
Sbjct: 71 SRDADCRAVVISGAGKMFTAGIDLMDMASDILQPKGDDVARISWYLRDIITRYQETFNVI 130
Query: 95 EDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQLGLPELTLGVIP--GT-QRLPRLV 151
E C KP+ C R A + E+ +G+ GT QRLP+++
Sbjct: 131 ERCPKPVIAAVHGGCIGGGVDLVTACDIRYCAQDAFFQVKEVDVGLAADVGTLQRLPKVI 190
Query: 152 GLSKAI-EMMLLSKSITSEEGWKLGLIDAVVTSEELL 187
G + E+ ++ + ++E GL+ V +E++
Sbjct: 191 GNQSLVNELAFTARKMMADEALGSGLVSRVFPDKEVM 227
>pdb|2VSU|F Chain F, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase
( Hchl) With Acetyl-Coenzyme A And Vanillin Gives
Insights Into Substrate Specificity And Mechanism
Length = 276
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 76/185 (41%), Gaps = 7/185 (3%)
Query: 13 DGVAIITLINPPV-NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DG+A + L P NA++ + + D E +VLTG G ++ G D+ +
Sbjct: 17 DGIAFVILNRPERRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGMDLKEYF 76
Query: 72 KVHGAGDVSLMPDVSVE---LVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPK 128
+ AG L + E L+ KP + C I A +
Sbjct: 77 REVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFAPLVACDLAICADE 136
Query: 129 TQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEE 185
GL E+ G+ PG ++ + VG +++ ++ K+ ++ ++GL++ V +
Sbjct: 137 ATFGLSEINWGIPPGNLVSKAMADTVGHRQSLYYIMTGKTFGGQKAAEMGLVNESVPLAQ 196
Query: 186 LLKVS 190
L +V+
Sbjct: 197 LREVT 201
>pdb|3OME|A Chain A, Crystal Structure Of A Probable Enoyl-Coa Hydratase From
Mycobacterium Smegmatis
pdb|3OME|B Chain B, Crystal Structure Of A Probable Enoyl-Coa Hydratase From
Mycobacterium Smegmatis
pdb|3OME|C Chain C, Crystal Structure Of A Probable Enoyl-Coa Hydratase From
Mycobacterium Smegmatis
pdb|3OME|D Chain D, Crystal Structure Of A Probable Enoyl-Coa Hydratase From
Mycobacterium Smegmatis
pdb|3OME|E Chain E, Crystal Structure Of A Probable Enoyl-Coa Hydratase From
Mycobacterium Smegmatis
pdb|3OME|F Chain F, Crystal Structure Of A Probable Enoyl-Coa Hydratase From
Mycobacterium Smegmatis
Length = 282
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 80/200 (40%), Gaps = 23/200 (11%)
Query: 13 DGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D +A ITL P NA ++ L + A ++VK I+L NG FS G D+
Sbjct: 31 DSIATITLNRPEAANAQNPELLDELDAAWTRAAEDNEVKVIILRANGKHFSAGHDLR--- 87
Query: 72 KVHGAGDVSLMPDVSVELVVN-----------LIEDCKKPIXXXXXXXXXXXXXXXXMGC 120
G G+V +S+E ++ + KP C
Sbjct: 88 ---GGGEVP--EKISLEFIIQHEARRYLDYTLRWRNVPKPSIAAVQGRCISGGLLLCWPC 142
Query: 121 HARIAAPKTQLGLPELTLGVIPGTQRLPRL--VGLSKAIEMMLLSKSITSEEGWKLGLID 178
+A+ P +G I G + +G KA E++ +++T+EE + G+++
Sbjct: 143 DLILASDDALFSDPVALMG-IGGVEYHGHTWELGPRKAKEILFTGRALTAEEAERTGMVN 201
Query: 179 AVVTSEELLKVSRLWALDIA 198
VV +EL +R A IA
Sbjct: 202 RVVARDELDAQTRELAEQIA 221
>pdb|3MYB|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Mycobacterium
Smegm
pdb|3MYB|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase Mycobacterium
Smegm
pdb|3MYB|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase Mycobacterium
Smegm
Length = 286
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 77/200 (38%), Gaps = 26/200 (13%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPV-NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGG 59
M+ P + + GV +TL P NAL+ ++A L + F + V+A+VL +G
Sbjct: 22 MSEPLLLQDRDERGVVTLTLNRPQAFNALSEAMLAALGEAFGTLAEDESVRAVVLAASGK 81
Query: 60 RFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKK----------PIXXXXXXXX 109
F G D+ + + S E L C P+
Sbjct: 82 AFCAGHDLK-----------EMRAEPSREYYEKLFARCTDVMLAIQRLPAPVIARVHGIA 130
Query: 110 XXXXXXXXMGCHARIAAPKTQLGLPELTLGVI---PGTQRLPRLVGLSKAIEMMLLSKSI 166
C +A + + + +G+ PG L R VG A EM++ + +
Sbjct: 131 TAAGCQLVAMCDLAVATRDARFAVSGINVGLFCSTPGVA-LSRNVGRKAAFEMLVTGEFV 189
Query: 167 TSEEGWKLGLIDAVVTSEEL 186
++++ LGL++ VV + L
Sbjct: 190 SADDAKGLGLVNRVVAPKAL 209
>pdb|3R6H|A Chain A, Crystal Structure Of An Enoyl-Coa Hydratase (Echa3) From
Mycobacterium Marinum
Length = 233
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 88/217 (40%), Gaps = 10/217 (4%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+D + +I + + VN L + L + + A RD+V A+V+ GN FSGGFD+ V
Sbjct: 12 DDAIGVIRMDDGKVNVLGPTMQQALNEAID-AADRDNVGALVIAGNHRVFSGGFDLKVLT 70
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQL 131
+ ++ EL L+ K + G H R+AA +
Sbjct: 71 SGEAKPAIDMLRG-GFELSYRLLSYPKPVVIACTGHAIAMGAFLLCSGDH-RVAAHAYNV 128
Query: 132 GLPELTLGV-IP--GTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 188
E+ +G+ IP + L + S + L+K+ E G ID + E +L
Sbjct: 129 QANEVAIGMTIPYAAMEVLKLRLTPSAYQQAAGLAKTFFGETALAAGFIDEISLPEVVLS 188
Query: 189 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLK 225
+ A + A + H KL + +EA + ++
Sbjct: 189 RAEEAAREFAGLNQ----QAHNATKLRARAEALKAIR 221
>pdb|2J5I|A Chain A, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
Length = 276
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 76/185 (41%), Gaps = 7/185 (3%)
Query: 13 DGVAIITLINPPV-NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DG+A + L P NA++ + + D E +VLTG G ++ G D+ +
Sbjct: 17 DGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGMDLKEYF 76
Query: 72 KVHGAGDVSLMPDVSVE---LVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPK 128
+ AG L + E L+ KP + C I A +
Sbjct: 77 REVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFSPLVACDLAICADE 136
Query: 129 TQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEE 185
GL E+ G+ PG ++ + VG +++ ++ K+ ++ ++GL++ V +
Sbjct: 137 ATFGLSEINWGIPPGNLVSKAMADTVGHRQSLMYIMTGKTFGGQKAAEMGLVNESVPLAQ 196
Query: 186 LLKVS 190
L +V+
Sbjct: 197 LREVT 201
>pdb|2FBM|A Chain A, Acetyltransferase Domain Of Cdy1
pdb|2FBM|B Chain B, Acetyltransferase Domain Of Cdy1
pdb|2FBM|C Chain C, Acetyltransferase Domain Of Cdy1
Length = 291
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 68/177 (38%), Gaps = 11/177 (6%)
Query: 26 NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK--VHGAGDVSLMP 83
NAL ++ + + A + DD K ++ + G F G D F K + SL
Sbjct: 46 NALNTEVIKEIVNALNSAAA-DDSKLVLFSAAGSVFCCGLDFGYFVKHLRNNRNTASLEM 104
Query: 84 DVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQLGLPELTLGVIP- 142
+++ VN KKPI C A K P T G P
Sbjct: 105 VDTIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTPYTTFGQSPD 164
Query: 143 --GTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAV-----VTSEELLKVSRL 192
+ P+++G + A EM++ + +T+ E GL+ V T E ++++ L
Sbjct: 165 GCSSITFPKMMGKASANEMLIAGRKLTAREACAKGLVSQVFLTGTFTQEVMIQIKEL 221
>pdb|2FW2|A Chain A, Catalytic Domain Of Cdy
pdb|2FW2|B Chain B, Catalytic Domain Of Cdy
pdb|2FW2|C Chain C, Catalytic Domain Of Cdy
pdb|2FW2|D Chain D, Catalytic Domain Of Cdy
pdb|2FW2|E Chain E, Catalytic Domain Of Cdy
pdb|2FW2|F Chain F, Catalytic Domain Of Cdy
Length = 260
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 69/178 (38%), Gaps = 13/178 (7%)
Query: 26 NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGD---VSLM 82
NAL ++ + + A + DD K ++ + G F G D F + H D SL
Sbjct: 27 NALNTEVIKEMVNALNSAAA-DDSKLVLFSAAGSVFCCGLDFGYFVR-HLRNDRNTASLE 84
Query: 83 PDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQLGLPELTLGVIP 142
+++ VN KKPI C A K P T G P
Sbjct: 85 MVDTIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTPYTTFGQSP 144
Query: 143 ---GTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAV-----VTSEELLKVSRL 192
+ P+++G + A EM++ + +T+ E GL+ V T E ++++ L
Sbjct: 145 DGCSSITFPKMMGKASANEMLIAGRKLTAREACAKGLVSQVFLTGTFTQEVMIQIKEL 202
>pdb|2F6Q|A Chain A, The Crystal Structure Of Human Peroxisomal Delta3, Delta2
Enoyl Coa Isomerase (Peci)
pdb|2F6Q|B Chain B, The Crystal Structure Of Human Peroxisomal Delta3, Delta2
Enoyl Coa Isomerase (Peci)
pdb|2F6Q|C Chain C, The Crystal Structure Of Human Peroxisomal Delta3, Delta2
Enoyl Coa Isomerase (Peci)
Length = 280
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 59/157 (37%), Gaps = 7/157 (4%)
Query: 42 EATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVEL--VVNLIEDCKK 99
+A S+DD VLTGNG +S G D+ F + G + +V L V D K
Sbjct: 63 KAASKDDSIITVLTGNGDYYSSGNDLTNFTDIPPGGVEEKAKNNAVLLREFVGCFIDFPK 122
Query: 100 PIXXXXXXXXXXXXXXXXMGCHARIAAPKTQLGLPELTLGVIP---GTQRLPRLVGLSKA 156
P+ A A+ + P LG P + P++ +KA
Sbjct: 123 PLIAVVNGPAVGISVTLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTFPKIXSPAKA 182
Query: 157 IEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLW 193
E ++ K +T+ E GL+ V K +W
Sbjct: 183 TEXLIFGKKLTAGEACAQGLVTEVFPDSTFQK--EVW 217
>pdb|3LKE|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Halodurans
pdb|3LKE|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Halodurans
pdb|3LKE|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Halodurans
Length = 263
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 118 MGCHARIAAPKTQLGLPELTLGVIP---GTQRLPRLVGLSKAIEMMLLSKSITSEEGWKL 174
+ C RIA + + +G+ P + LPR++G + + ++L K TSEE +L
Sbjct: 121 LACDRRIALRRAKFLENFHKMGISPDLGASYFLPRIIGYEQTMNLLLEGKLFTSEEALRL 180
Query: 175 GLIDAVVTSEELLK 188
GLI + +++ L+
Sbjct: 181 GLIQEICENKQELQ 194
>pdb|1RJM|A Chain A, Crystal Structure Of Menb (rv0548c) From Mycobacterium
Tuberculosis
pdb|1RJM|B Chain B, Crystal Structure Of Menb (rv0548c) From Mycobacterium
Tuberculosis
pdb|1RJM|C Chain C, Crystal Structure Of Menb (rv0548c) From Mycobacterium
Tuberculosis
pdb|1RJN|A Chain A, The Crystal Structure Of Menb (Rv0548c) From Mycobacterium
Tuberculosis In Complex With The Coa Portion Of
Naphthoyl Coa
pdb|1RJN|B Chain B, The Crystal Structure Of Menb (Rv0548c) From Mycobacterium
Tuberculosis In Complex With The Coa Portion Of
Naphthoyl Coa
pdb|1RJN|C Chain C, The Crystal Structure Of Menb (Rv0548c) From Mycobacterium
Tuberculosis In Complex With The Coa Portion Of
Naphthoyl Coa
Length = 339
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 143 GTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAAR 200
G+ L R VG A E+ L ++ T+E+ ++G ++AV EL V WA +I A+
Sbjct: 221 GSAYLARQVGQKFAREIFFLGRTYTAEQMHQMGAVNAVAEHAELETVGLQWAAEINAK 278
>pdb|1DCI|A Chain A, Dienoyl-Coa Isomerase
pdb|1DCI|B Chain B, Dienoyl-Coa Isomerase
pdb|1DCI|C Chain C, Dienoyl-Coa Isomerase
Length = 275
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 81/194 (41%), Gaps = 24/194 (12%)
Query: 26 NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMP-- 83
NA+ L + F++ + D +A+V++G G F+ G D+ + A D+ P
Sbjct: 26 NAMNRAFWRELVECFQKISKDSDCRAVVVSGAGKMFTSGIDL-----MDMASDILQPPGD 80
Query: 84 DVS------------VELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQL 131
DV+ + +IE C KP+ C R
Sbjct: 81 DVARIAWYLRDLISRYQKTFTVIEKCPKPVIAAIHGGCIGGGVDLISACDIRYCTQDAFF 140
Query: 132 GLPELTLGVIP--GT-QRLPRLVGLSKAI-EMMLLSKSITSEEGWKLGLIDAVVTSEE-L 186
+ E+ +G+ GT QRLP+++G + E+ ++ + ++E GL+ V ++ +
Sbjct: 141 QVKEVDVGLAADVGTLQRLPKVIGNRSLVNELTFTARKMMADEALDSGLVSRVFPDKDVM 200
Query: 187 LKVSRLWALDIAAR 200
L + A DI+++
Sbjct: 201 LNAAFALAADISSK 214
>pdb|1Q51|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|C Chain C, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|D Chain D, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|E Chain E, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|F Chain F, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|G Chain G, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|H Chain H, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|I Chain I, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|J Chain J, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|K Chain K, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|L Chain L, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q52|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|C Chain C, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|D Chain D, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|E Chain E, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|F Chain F, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|G Chain G, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|H Chain H, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|I Chain I, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|J Chain J, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|K Chain K, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|L Chain L, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
Length = 314
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 143 GTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAAR 200
G+ L R VG A E+ L ++ T+E+ ++G ++AV EL V WA +I A+
Sbjct: 196 GSAYLARQVGQKFAREIFFLGRTYTAEQMHQMGAVNAVAEHAELETVGLQWAAEINAK 253
>pdb|3T8A|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Substrate Analogue, Osb-Ncoa
pdb|3T8A|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Substrate Analogue, Osb-Ncoa
pdb|3T8A|C Chain C, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Substrate Analogue, Osb-Ncoa
pdb|3T8B|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Menb With
Altered Hexameric Assembly
pdb|3T8B|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Menb With
Altered Hexameric Assembly
Length = 334
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 143 GTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAAR 200
G+ L R VG A E+ L ++ T+E+ ++G ++AV EL V WA +I A+
Sbjct: 216 GSAYLARQVGQKFAREIFFLGRTYTAEQMHQMGAVNAVAEHAELETVGLQWAAEINAK 273
>pdb|3H0U|A Chain A, Crystal Structure Of A Putative Enoyl-Coa Hydratase From
Streptomyces Avermitilis
pdb|3H0U|B Chain B, Crystal Structure Of A Putative Enoyl-Coa Hydratase From
Streptomyces Avermitilis
pdb|3H0U|C Chain C, Crystal Structure Of A Putative Enoyl-Coa Hydratase From
Streptomyces Avermitilis
Length = 289
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Query: 118 MGCHARIAAPKTQ-LGLPELTLGVIPGT---QRLPRLVGLSKAIEMMLLSKSITSEEGWK 173
+ C R A+ + LG PE+ +G PG Q L RL+G +A+E +L S ++ +
Sbjct: 123 LACDMRFASRENAILGQPEVGIGAPPGAGAIQHLTRLLGRGRALEAVLTSSDFDADLAER 182
Query: 174 LGLIDAVVTSEEL 186
G ++ V EL
Sbjct: 183 YGWVNRAVPDAEL 195
>pdb|3OT6|A Chain A, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE
FAMILY PROTEIN From Psudomonas Syringae
Length = 232
Score = 37.7 bits (86), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINV 69
+DGVA +TL N VNA++ ++ ++A D +++TG G SGG+D+ V
Sbjct: 13 DDGVATLTLNNGKVNAISPDVIIAFNAALDQA--EKDRAIVIVTGQPGILSGGYDLKV 68
>pdb|1XX4|A Chain A, Crystal Structure Of Rat Mitochondrial 3,2-Enoyl-Coa
Length = 261
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 75/190 (39%), Gaps = 14/190 (7%)
Query: 11 GNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNG-GRFSGGFDINV 69
G G+A++ NPPVN+L++ + E+ + ++ ++LT G FS G D+
Sbjct: 12 GEAGIAVMKFKNPPVNSLSLEFLTEFVISLEKLENDKSIRGVILTSERPGIFSAGLDLME 71
Query: 70 F---QKVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAA 126
H A + ++ + L ++ + + + C RI A
Sbjct: 72 MYGRNPAHYAEYWKAVQELWLRLYLSNL-----TLISAINGASPAGGCLMALTCDYRIMA 126
Query: 127 --PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVV 181
K +GL E LG++ +G A + L E K+GL+D VV
Sbjct: 127 DNSKYTIGLNESLLGIVAPFWLKDNYVNTIGHRAAERALQLGTLFPPAEALKVGLVDEVV 186
Query: 182 TSEELLKVSR 191
+++ +R
Sbjct: 187 PEDQVHSKAR 196
>pdb|3T3W|A Chain A, Crystal Structure Of Probable Enoyl-Coa Hydratase From
Mycobacterium Thermoresistibile
pdb|3T3W|B Chain B, Crystal Structure Of Probable Enoyl-Coa Hydratase From
Mycobacterium Thermoresistibile
pdb|3T3W|C Chain C, Crystal Structure Of Probable Enoyl-Coa Hydratase From
Mycobacterium Thermoresistibile
pdb|3T3W|D Chain D, Crystal Structure Of Probable Enoyl-Coa Hydratase From
Mycobacterium Thermoresistibile
pdb|3T3W|E Chain E, Crystal Structure Of Probable Enoyl-Coa Hydratase From
Mycobacterium Thermoresistibile
pdb|3T3W|F Chain F, Crystal Structure Of Probable Enoyl-Coa Hydratase From
Mycobacterium Thermoresistibile
Length = 279
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 82/202 (40%), Gaps = 25/202 (12%)
Query: 12 NDGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVF 70
+D +A ITL P NA ++ L + A +DV IVL NG FS G D+
Sbjct: 27 SDRIATITLNRPEAANAQNPELLDELDAAWTRAAEDNDVSVIVLRANGKHFSAGHDLR-- 84
Query: 71 QKVHGAGDVSLMPD-VSVELVV-----NLIE------DCKKPIXXXXXXXXXXXXXXXXM 118
G G V PD +++E + +E + KP
Sbjct: 85 ----GGGPV---PDKLTLEFIYAHESRRYLEYSLRWRNVPKPSIAAVQGRCISGGLLLCW 137
Query: 119 GCHARIAAPKTQLGLPELTLGVIPGTQRLPRL--VGLSKAIEMMLLSKSITSEEGWKLGL 176
C IAA P + L I G + +G KA E++ +++T+EE + G+
Sbjct: 138 PCDLIIAAEDALFSDP-VVLMDIGGVEYHGHTWELGPRKAKEILFTGRAMTAEEVAQTGM 196
Query: 177 IDAVVTSEELLKVSRLWALDIA 198
++ VV + L +R A +IA
Sbjct: 197 VNRVVPRDRLDAETRALAGEIA 218
>pdb|2Q2X|A Chain A, Crystal Structure Of The Ech2 Decarboxylase Domain Of Curf
From Lyngbya Majuscula
pdb|2Q34|A Chain A, Crystal Structure Of The Ech2 Decarboxylase Domain Of Curf
From Lyngbya Majuscula, Rhombohedral Crystal Form
Length = 243
Score = 35.8 bits (81), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 39/94 (41%), Gaps = 9/94 (9%)
Query: 9 EVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDIN 68
E+GN V I N + IV GL+ F K ++LTG G FS G
Sbjct: 8 ELGNGVVQITXKDESSRNGFSPSIVEGLRHCFSVVAQNQQYKVVILTGYGNYFSSGASKE 67
Query: 69 -VFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPI 101
+ +K G +V V + LI DC+ PI
Sbjct: 68 YLIRKTRG--------EVEVLDLSGLILDCEIPI 93
>pdb|2Q35|A Chain A, Crystal Structure Of The Y82f Variant Of Ech2
Decarboxylase Domain Of Curf From Lyngbya Majuscula
Length = 243
Score = 35.8 bits (81), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 39/94 (41%), Gaps = 9/94 (9%)
Query: 9 EVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDIN 68
E+GN V I N + IV GL+ F K ++LTG G FS G
Sbjct: 8 ELGNGVVQITMKDESSRNGFSPSIVEGLRHCFSVVAQNQQYKVVILTGYGNYFSSGASKE 67
Query: 69 -VFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPI 101
+ +K G +V V + LI DC+ PI
Sbjct: 68 FLIRKTRG--------EVEVLDLSGLILDCEIPI 93
>pdb|2GTR|A Chain A, Human Chromodomain Y-Like Protein
pdb|2GTR|B Chain B, Human Chromodomain Y-Like Protein
pdb|2GTR|C Chain C, Human Chromodomain Y-Like Protein
Length = 261
Score = 35.8 bits (81), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 58/156 (37%), Gaps = 10/156 (6%)
Query: 47 DDVKAIVLTGNGGRFSGGFDINVFQK--VHGAGDVSLMPDVSVELVVNLIEDCKKPIXXX 104
DD K ++L+ G F G D F + S ++ VN KKPI
Sbjct: 48 DDSKLVLLSAVGSVFCCGLDFIYFIRRLTDDRKRESTKMAEAIRNFVNTFIQFKKPIIVA 107
Query: 105 XXXXXXXXXXXXXMGCHARIAAPKTQLGLPELTLGVIP---GTQRLPRLVGLSKAIEMML 161
C A K P T G P T P+++G + A EM+L
Sbjct: 108 VNGPAIGLGASILPLCDVVWANEKAWFQTPYTTFGQSPDGCSTVMFPKIMGGASANEMLL 167
Query: 162 LSKSITSEEGWKLGLIDAV-----VTSEELLKVSRL 192
+ +T++E GL+ V T E ++++ L
Sbjct: 168 SGRKLTAQEACGKGLVSQVFWPGTFTQEVMVRIKEL 203
>pdb|4HDT|A Chain A, Crystal Structure Of A Carnitinyl-Coa Dehydratase From
Mycobacterium Thermoresistibile
Length = 353
Score = 35.8 bits (81), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 77/187 (41%), Gaps = 13/187 (6%)
Query: 14 GVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR--FSGGFDINVF 70
GV ++TL P +N+L +V + ++ + D V+A++LTG G R +GG + ++
Sbjct: 18 GVGLLTLNRPKAINSLTHGMVTTMAERLAAWENDDSVRAVLLTGAGERGLCAGGDVVAIY 77
Query: 71 Q--KVHGAGDVSLMPDVSVELVVNL-IEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAP 127
K GA D E +N I KP + R+
Sbjct: 78 HSAKADGAEARRFWFD---EYRLNAHIGRYPKPYVSIMDGIVMGGGVGVGAHGNVRVVTD 134
Query: 128 KTQLGLPELTLGVIP---GTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 184
T++ +PE+ +G IP GT L R G + L + + +G D V +
Sbjct: 135 TTKMAMPEVGIGFIPDVGGTYLLSRAPG-KLGLHAALTGAPFSGADAIVMGFADHYVPHD 193
Query: 185 ELLKVSR 191
++ + +R
Sbjct: 194 KIDEFTR 200
>pdb|3FDU|A Chain A, Crystal Structure Of A Putative Enoyl-Coa
HydrataseISOMERASE FROM Acinetobacter Baumannii
pdb|3FDU|B Chain B, Crystal Structure Of A Putative Enoyl-Coa
HydrataseISOMERASE FROM Acinetobacter Baumannii
pdb|3FDU|C Chain C, Crystal Structure Of A Putative Enoyl-Coa
HydrataseISOMERASE FROM Acinetobacter Baumannii
pdb|3FDU|D Chain D, Crystal Structure Of A Putative Enoyl-Coa
HydrataseISOMERASE FROM Acinetobacter Baumannii
pdb|3FDU|E Chain E, Crystal Structure Of A Putative Enoyl-Coa
HydrataseISOMERASE FROM Acinetobacter Baumannii
pdb|3FDU|F Chain F, Crystal Structure Of A Putative Enoyl-Coa
HydrataseISOMERASE FROM Acinetobacter Baumannii
Length = 266
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 89/227 (39%), Gaps = 15/227 (6%)
Query: 17 IITL-INPPV--NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ-- 71
++TL IN P NAL + + +EA DV+ +VL G F+ G D+ F
Sbjct: 15 VLTLAINRPEAKNALYGELYLWIAKALDEADQNKDVRVVVLRGAEHDFTAGNDMKDFMGF 74
Query: 72 -KVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQ 130
+ AG +P +++ KP+ + A
Sbjct: 75 VQNPNAGPAGQVPPF---VLLKSAARLSKPLIIAVKGVAIGIGVTILLQADLVFADNTAL 131
Query: 131 LGLPELTLGVIP---GTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS---E 184
+P ++LG+ P +Q L + G KA E++ +K +E + GL++ +V
Sbjct: 132 FQIPFVSLGLSPEGGASQLLVKQAGYHKAAELLFTAKKFNAETALQAGLVNEIVEDAYAT 191
Query: 185 ELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQA 231
L AL +A+ ++ H D++ + + + R+Q+
Sbjct: 192 AQATAQHLTALPLASLKQTKALMKHDLDQIIECIDHEAEIFMQRVQS 238
>pdb|3GKB|A Chain A, Crystal Structure Of A Putative Enoyl-coa Hydratase From
Streptomyces Avermitilis
pdb|3GKB|B Chain B, Crystal Structure Of A Putative Enoyl-coa Hydratase From
Streptomyces Avermitilis
pdb|3GKB|C Chain C, Crystal Structure Of A Putative Enoyl-coa Hydratase From
Streptomyces Avermitilis
Length = 287
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 82/194 (42%), Gaps = 8/194 (4%)
Query: 14 GVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFS-GGFDINVFQK 72
GVA I L NPPVN + ++ L+ V+ IV + F D+ + +K
Sbjct: 18 GVARIILDNPPVNVIGATMMRELRTVLTTLADDSSVRVIVFSSADPEFFLAHVDMRIGEK 77
Query: 73 VHGAGDV--SLMPDVSV-ELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKT 129
+ ++ S DV+V + V LI + AA +T
Sbjct: 78 MDALQELAASAPADVNVFQAVGELIRHQPQVTIVKLAGKARGGGAEFVAAADMAFAAAET 137
Query: 130 Q-LGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEE 185
LG E +G+IPG TQ L VG ++A+E++L + +E G I+ + ++E
Sbjct: 138 AGLGQIEALMGIIPGGGGTQYLRGRVGRNRALEVVLTADLFDAETAASYGWINRALPADE 197
Query: 186 LLKVSRLWALDIAA 199
L + A +IAA
Sbjct: 198 LDEYVDRVARNIAA 211
>pdb|4J2U|A Chain A, Crystal Structure Of An Enoyl-coa Hydratase From
Rhodobacter Sphaeroides 2.4.1
pdb|4J2U|B Chain B, Crystal Structure Of An Enoyl-coa Hydratase From
Rhodobacter Sphaeroides 2.4.1
Length = 365
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 58/144 (40%), Gaps = 11/144 (7%)
Query: 18 ITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR-FSGGFDINVFQKVHG 75
ITL P +NAL V + +V+ +V+ G R F G DI
Sbjct: 37 ITLSRPAALNALTCAXVQEIDAALRGWIGDPEVELVVIDAEGPRAFCAGGDIAELHGRGV 96
Query: 76 AGDVSLMPDV-SVELVVN-LIEDCKKPIXXXXXXXXXXXXXXXXMGCHAR--IAAPKTQL 131
AGD + D VE N I KPI +GCHAR I +Q+
Sbjct: 97 AGDHAFGQDFWRVEYRXNDRIAAFPKPIVSLXQGFTXGGGVG--LGCHARHRIVGETSQI 154
Query: 132 GLPELTLGVIP---GTQRLPRLVG 152
PE +G++P GT L R G
Sbjct: 155 SXPECAIGLVPDVGGTHLLARAPG 178
>pdb|3NJB|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Smegmatis, Iodide Soak
pdb|3NJB|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Smegmatis, Iodide Soak
pdb|3NJD|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Smegmatis
pdb|3NJD|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Smegmatis
Length = 333
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 68/200 (34%), Gaps = 30/200 (15%)
Query: 6 VTMEVGNDGVAIITLINPPV-NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGG 64
+T EV D VA IT P NA+ L E A DV I+++G G F G
Sbjct: 37 MTYEV-TDRVARITFNRPEKGNAIVADTPLELSALVERADLDPDVHVILVSGRGEGFCAG 95
Query: 65 FDINVF----------------------QKVHGAGDVSLMPDVSVELVVNLIE------D 96
FD++ + Q ++ D P V +++ +
Sbjct: 96 FDLSAYAEGSSSAGGGSPYEGTVLSGKTQALNHLPDEPWDPMVDYQMMSRFVRGFASLMH 155
Query: 97 CKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQLGLPELTLGVIPGTQRLPRLVGLSKA 156
C KP + IAA ++G P + + +P +G +A
Sbjct: 156 CDKPTVVKIHGYCVAGGTDIALHADQVIAAADAKIGYPPMRVWGVPAAGLWAHRLGDQRA 215
Query: 157 IEMMLLSKSITSEEGWKLGL 176
++ IT + + GL
Sbjct: 216 KRLLFTGDCITGAQAAEWGL 235
>pdb|3Q7J|A Chain A, Engineered Thermoplasma Acidophilum F3 Factor Mimics Human
Aminopeptidase N (Apn) As A Target For Anticancer Drug
Development
pdb|3Q7J|B Chain B, Engineered Thermoplasma Acidophilum F3 Factor Mimics Human
Aminopeptidase N (Apn) As A Target For Anticancer Drug
Development
Length = 780
Score = 32.7 bits (73), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 9/95 (9%)
Query: 316 MGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG 375
M S IATA+ L + LK + ++ + + E VR + GKL K+N L + G
Sbjct: 621 MRSSIATAYAL--VTGDLKGLLEKF--RSVDRDEDRVRIISAFGKL---KSNTDLSTVYG 673
Query: 376 VLDYSEFKDVDMV--IEAVIESVPLKQKIFSELEK 408
+++ +E K DM+ + +E++P ++ IF+ L++
Sbjct: 674 MVEKTEIKKQDMISFFSSALETLPGREFIFANLDR 708
>pdb|1Z1W|A Chain A, Crystal Structures Of The Tricorn Interacting Facor F3
From Thermoplasma Acidophilum, A Zinc Aminopeptidase In
Three Different Conformations
pdb|1Z5H|A Chain A, Crystal Structures Of The Tricorn Interacting Factor F3
From Thermoplasma Acidophilum
pdb|1Z5H|B Chain B, Crystal Structures Of The Tricorn Interacting Factor F3
From Thermoplasma Acidophilum
Length = 780
Score = 32.7 bits (73), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 9/95 (9%)
Query: 316 MGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG 375
M S IATA+ L + LK + ++ + + E VR + GKL K+N L + G
Sbjct: 621 MRSSIATAYAL--VTGDLKGLLEKF--RSVDRDEDRVRIISAFGKL---KSNTDLSTVYG 673
Query: 376 VLDYSEFKDVDMV--IEAVIESVPLKQKIFSELEK 408
+++ +E K DM+ + +E++P ++ IF+ L++
Sbjct: 674 MVEKTEIKKQDMISFFSSALETLPGREFIFANLDR 708
>pdb|3HL2|A Chain A, The Crystal Structure Of The Human Sepsecs-Trnasec Complex
pdb|3HL2|B Chain B, The Crystal Structure Of The Human Sepsecs-Trnasec Complex
pdb|3HL2|C Chain C, The Crystal Structure Of The Human Sepsecs-Trnasec Complex
pdb|3HL2|D Chain D, The Crystal Structure Of The Human Sepsecs-Trnasec Complex
Length = 501
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 12/88 (13%)
Query: 491 VNRAFFPYSQSARLLVSLGVDVFRIDSAIRS----FGLPIGPFQLLDLAGYGVAAATSKE 546
VN A+ S L+ G V RID+ ++S F +P+G +AG+ + +E
Sbjct: 251 VNNAYGVQSSKCMHLIQQGARVGRIDAFVQSLDKNFMVPVGG---AIIAGFN--DSFIQE 305
Query: 547 FDKAFPDRSFQSPLVDL---LLKSGRNG 571
K +P R+ SP +D+ LL G NG
Sbjct: 306 ISKMYPGRASASPSLDVLITLLSLGSNG 333
>pdb|3M6M|A Chain A, Crystal Structure Of Rpff Complexed With Rec Domain Of
Rpfc
pdb|3M6M|B Chain B, Crystal Structure Of Rpff Complexed With Rec Domain Of
Rpfc
pdb|3M6M|C Chain C, Crystal Structure Of Rpff Complexed With Rec Domain Of
Rpfc
pdb|3M6N|A Chain A, Crystal Structure Of Rpff
pdb|3M6N|B Chain B, Crystal Structure Of Rpff
pdb|3M6N|C Chain C, Crystal Structure Of Rpff
Length = 305
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 118 MGCHARIAAPKTQLGLPELTLGVIPGT---QRLPRLVGLSKAIEMMLLSKSITSEEGWKL 174
+ CH IA +GLPE+ + PG + + + A ++ML ++E+ +
Sbjct: 160 LSCHTIIAEEGVMMGLPEVLFDLFPGMGAYSFMCQRISAHLAQKIMLEGNLYSAEQLLGM 219
Query: 175 GLIDAVV 181
GL+D VV
Sbjct: 220 GLVDRVV 226
>pdb|3QXI|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa1 From
Mycobacterium Marinum
pdb|3QXI|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase Echa1 From
Mycobacterium Marinum
pdb|3QXI|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase Echa1 From
Mycobacterium Marinum
Length = 265
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 84/228 (36%), Gaps = 49/228 (21%)
Query: 4 PRVTMEVGNDGVAIITLINPPV-NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFS 62
P V +E D + IIT+ P N++ + L D + + + +LTG GG F
Sbjct: 15 PEVLVEQ-RDRILIITINRPKAKNSVNAAVSRALADAMDRLDADAGLSVGILTGAGGSFC 73
Query: 63 GGFDINVFQK-----VHGAGDVSLMPDVSVELVVNLIE-DCKKPIXXXXXXXXXXXXXXX 116
G D+ F + V G G + E KP+
Sbjct: 74 AGMDLKAFARGENVVVEGRG-------------LGFTERPPAKPLIAAVEGYALAGGTEL 120
Query: 117 XMGCHARIAAPKTQLGLPEL---TLGVIPGTQRLPRLVGLSKAIEMMLLSKSITSEEGWK 173
+ +AA + G+PE+ + G RLP + + A+E+ L ++++E
Sbjct: 121 ALATDLIVAARDSAFGIPEVKRGLVAGGGGLLRLPERIPYAIAMELALTGDNLSAERAHA 180
Query: 174 LGLID-------------------------AVVTSEELLKVSRLWALD 196
LG+++ AV ++ ++ SR W+LD
Sbjct: 181 LGMVNVLAEPGAALDAAIALAEKITANGPLAVAATKRIITESRGWSLD 228
>pdb|3UL5|A Chain A, Saccharum Officinarum Canecystatin-1 In Space Group C2221
pdb|3UL5|B Chain B, Saccharum Officinarum Canecystatin-1 In Space Group C2221
pdb|3UL5|C Chain C, Saccharum Officinarum Canecystatin-1 In Space Group C2221
pdb|3UL5|D Chain D, Saccharum Officinarum Canecystatin-1 In Space Group C2221
pdb|3UL6|A Chain A, Saccharum Officinarum Canecystatin-1 In Space Group P6422
pdb|3UL6|B Chain B, Saccharum Officinarum Canecystatin-1 In Space Group P6422
Length = 139
Score = 30.4 bits (67), Expect = 4.0, Method: Composition-based stats.
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 299 GLKPRGVRKVAVIGGGLMGSGIATAH 324
GL PRG ++ GG MG G+A AH
Sbjct: 13 GLVPRGSHMASMTGGQQMGRGMAEAH 38
>pdb|3BC8|A Chain A, Crystal Structure Of Mouse Selenocysteine Synthase
pdb|3BCA|A Chain A, Crystal Structure Of Mouse Selenocysteine Synthase, Sodium
Iodide Soak
pdb|3BCB|A Chain A, Crystal Structure Of Mouse Selenocysteine Synthase, Sodium
Phosphate Soak
Length = 450
Score = 29.3 bits (64), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 9/79 (11%)
Query: 491 VNRAFFPYSQSARLLVSLGVDVFRIDSAIRS----FGLPIGPFQLLDLAGYGVAAATSKE 546
VN A+ S L+ G V RID+ ++S F +P+G +AG+ ++
Sbjct: 233 VNNAYGLQSSKCMHLIQQGARVGRIDAFVQSLDXNFMVPVGG---AIIAGFN--EPFIQD 287
Query: 547 FDKAFPDRSFQSPLVDLLL 565
K +P R+ SP +D+L+
Sbjct: 288 ISKMYPGRASASPSLDVLI 306
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.137 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,338,801
Number of Sequences: 62578
Number of extensions: 789484
Number of successful extensions: 2656
Number of sequences better than 100.0: 130
Number of HSP's better than 100.0 without gapping: 88
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 2410
Number of HSP's gapped (non-prelim): 150
length of query: 721
length of database: 14,973,337
effective HSP length: 106
effective length of query: 615
effective length of database: 8,340,069
effective search space: 5129142435
effective search space used: 5129142435
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)