Query 004972
Match_columns 721
No_of_seqs 578 out of 4674
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 11:27:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004972.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004972hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3zwc_A Peroxisomal bifunctiona 100.0 2E-133 7E-138 1161.1 71.2 685 8-710 25-731 (742)
2 2wtb_A MFP2, fatty acid multif 100.0 2E-125 7E-130 1102.3 72.4 703 1-710 4-717 (725)
3 1wdk_A Fatty oxidation complex 100.0 1E-124 4E-129 1095.8 66.2 692 3-709 5-715 (715)
4 3k6j_A Protein F01G10.3, confi 100.0 2.3E-80 7.9E-85 679.2 40.6 414 282-708 27-448 (460)
5 1zcj_A Peroxisomal bifunctiona 100.0 2.9E-75 1E-79 649.9 40.7 433 272-710 1-452 (463)
6 3mog_A Probable 3-hydroxybutyr 100.0 1.8E-74 6.2E-79 642.9 43.7 404 303-710 3-476 (483)
7 3ado_A Lambda-crystallin; L-gu 100.0 4.7E-53 1.6E-57 443.1 24.8 268 304-582 5-281 (319)
8 1zej_A HBD-9, 3-hydroxyacyl-CO 100.0 1.3E-52 4.4E-57 436.7 25.4 257 305-583 12-273 (293)
9 3hrx_A Probable enoyl-COA hydr 100.0 3.2E-52 1.1E-56 428.6 26.9 247 6-292 2-252 (254)
10 4e12_A Diketoreductase; oxidor 100.0 1.9E-52 6.6E-57 438.2 25.6 275 304-581 3-283 (283)
11 4fzw_C 1,2-epoxyphenylacetyl-C 100.0 5.6E-52 1.9E-56 430.1 26.4 251 4-292 15-272 (274)
12 1f0y_A HCDH, L-3-hydroxyacyl-C 100.0 4.1E-51 1.4E-55 432.6 32.9 283 300-582 10-302 (302)
13 4fzw_A 2,3-dehydroadipyl-COA h 100.0 5.1E-52 1.7E-56 427.0 23.0 249 3-292 4-256 (258)
14 3kqf_A Enoyl-COA hydratase/iso 100.0 1.6E-50 5.6E-55 417.7 24.3 253 1-292 5-263 (265)
15 3pea_A Enoyl-COA hydratase/iso 100.0 1.3E-50 4.5E-55 417.4 23.5 252 3-292 5-259 (261)
16 3i47_A Enoyl COA hydratase/iso 100.0 2E-50 6.7E-55 417.2 24.2 255 1-293 1-261 (268)
17 3moy_A Probable enoyl-COA hydr 100.0 3.3E-50 1.1E-54 414.7 23.2 251 1-292 6-261 (263)
18 3hin_A Putative 3-hydroxybutyr 100.0 1.8E-50 6.3E-55 418.3 20.8 252 1-293 13-268 (275)
19 3h81_A Enoyl-COA hydratase ECH 100.0 4.5E-50 1.6E-54 416.0 22.7 251 1-292 22-276 (278)
20 3myb_A Enoyl-COA hydratase; ss 100.0 1.1E-49 3.6E-54 415.3 25.2 254 1-293 22-280 (286)
21 3gow_A PAAG, probable enoyl-CO 100.0 2.3E-49 7.9E-54 406.8 26.8 247 6-292 2-252 (254)
22 3fdu_A Putative enoyl-COA hydr 100.0 2.1E-49 7.1E-54 409.4 25.0 250 1-293 1-258 (266)
23 3p5m_A Enoyl-COA hydratase/iso 100.0 3.5E-49 1.2E-53 405.4 25.3 245 3-292 5-253 (255)
24 3swx_A Probable enoyl-COA hydr 100.0 9.2E-50 3.1E-54 412.4 20.8 253 1-292 5-263 (265)
25 3lke_A Enoyl-COA hydratase; ny 100.0 1E-49 3.5E-54 411.3 20.8 253 1-291 1-262 (263)
26 3g64_A Putative enoyl-COA hydr 100.0 5.4E-49 1.8E-53 409.7 26.1 253 3-293 16-276 (279)
27 3qmj_A Enoyl-COA hydratase, EC 100.0 1.4E-49 4.7E-54 409.2 19.9 248 3-288 5-256 (256)
28 3sll_A Probable enoyl-COA hydr 100.0 7.4E-49 2.5E-53 410.1 25.6 252 4-293 24-288 (290)
29 1nzy_A Dehalogenase, 4-chlorob 100.0 2.9E-49 1E-53 409.8 22.3 254 1-293 1-262 (269)
30 3rsi_A Putative enoyl-COA hydr 100.0 9.5E-49 3.3E-53 404.8 25.4 250 1-292 5-263 (265)
31 2ppy_A Enoyl-COA hydratase; be 100.0 1.3E-48 4.3E-53 404.1 25.8 249 3-291 8-262 (265)
32 3qxz_A Enoyl-COA hydratase/iso 100.0 1.6E-49 5.5E-54 410.3 18.5 251 3-293 6-263 (265)
33 3tlf_A Enoyl-COA hydratase/iso 100.0 5E-49 1.7E-53 409.2 21.9 251 4-292 11-272 (274)
34 2ej5_A Enoyl-COA hydratase sub 100.0 1E-48 3.4E-53 403.0 23.8 247 4-291 3-254 (257)
35 2pbp_A Enoyl-COA hydratase sub 100.0 1.2E-48 4.1E-53 402.7 24.3 250 1-291 1-255 (258)
36 3hp0_A Putative polyketide bio 100.0 1.1E-48 3.6E-53 403.7 23.8 251 1-293 4-258 (267)
37 3gkb_A Putative enoyl-COA hydr 100.0 6E-49 2E-53 409.4 21.5 245 3-288 8-261 (287)
38 1ef8_A Methylmalonyl COA decar 100.0 1.6E-48 5.3E-53 402.5 24.3 250 1-291 1-258 (261)
39 4hdt_A 3-hydroxyisobutyryl-COA 100.0 2.3E-48 7.9E-53 416.0 26.1 286 3-294 8-325 (353)
40 3trr_A Probable enoyl-COA hydr 100.0 1.2E-48 4.2E-53 401.3 23.0 246 1-292 5-254 (256)
41 2vx2_A Enoyl-COA hydratase dom 100.0 1.9E-48 6.6E-53 406.0 24.4 250 3-291 32-285 (287)
42 3qre_A Enoyl-COA hydratase, EC 100.0 1.9E-49 6.6E-54 415.4 16.2 253 3-293 28-293 (298)
43 1dci_A Dienoyl-COA isomerase; 100.0 6.3E-48 2.2E-52 401.3 27.1 253 2-291 1-272 (275)
44 3r9t_A ECHA1_1; ssgcid, seattl 100.0 9.7E-49 3.3E-53 404.6 20.0 252 1-292 5-265 (267)
45 3r9q_A Enoyl-COA hydratase/iso 100.0 5.7E-49 1.9E-53 404.9 18.0 246 4-292 11-260 (262)
46 4f47_A Enoyl-COA hydratase ECH 100.0 1.3E-48 4.6E-53 406.5 20.7 251 3-292 19-276 (278)
47 1wz8_A Enoyl-COA hydratase; ly 100.0 2.3E-48 7.9E-53 401.7 22.0 250 3-291 9-263 (264)
48 4eml_A Naphthoate synthase; 1, 100.0 3.5E-48 1.2E-52 401.9 22.9 252 3-293 9-270 (275)
49 3qk8_A Enoyl-COA hydratase ECH 100.0 1.8E-48 6.1E-53 403.7 18.2 250 3-293 12-268 (272)
50 3qxi_A Enoyl-COA hydratase ECH 100.0 5.5E-48 1.9E-52 398.5 21.6 247 2-292 13-263 (265)
51 2f6q_A Peroxisomal 3,2-trans-e 100.0 5.8E-48 2E-52 401.6 21.8 249 2-289 24-279 (280)
52 3rrv_A Enoyl-COA hydratase/iso 100.0 7.3E-48 2.5E-52 399.3 22.4 244 4-287 28-276 (276)
53 3l3s_A Enoyl-COA hydratase/iso 100.0 6.3E-48 2.2E-52 397.9 21.6 248 2-286 4-258 (263)
54 1sg4_A 3,2-trans-enoyl-COA iso 100.0 1.9E-48 6.3E-53 401.5 17.5 248 6-291 5-259 (260)
55 2uzf_A Naphthoate synthase; ly 100.0 2E-47 6.8E-52 396.4 25.2 250 3-293 12-268 (273)
56 3oc7_A Enoyl-COA hydratase; se 100.0 1.8E-47 6E-52 396.0 24.5 249 1-291 5-265 (267)
57 3t89_A 1,4-dihydroxy-2-naphtho 100.0 1.3E-47 4.5E-52 399.7 22.8 254 1-293 24-284 (289)
58 1uiy_A Enoyl-COA hydratase; ly 100.0 1.4E-47 4.7E-52 393.9 22.4 246 6-290 2-252 (253)
59 2a7k_A CARB; crotonase, antibi 100.0 6.5E-48 2.2E-52 395.5 19.9 244 6-288 2-250 (250)
60 2j5i_A P-hydroxycinnamoyl COA 100.0 1.3E-47 4.3E-52 398.5 22.1 248 3-287 8-265 (276)
61 3lao_A Enoyl-COA hydratase/iso 100.0 3.7E-48 1.3E-52 398.8 17.8 243 3-284 11-258 (258)
62 2fbm_A Y chromosome chromodoma 100.0 9.1E-48 3.1E-52 401.3 19.7 253 2-293 21-282 (291)
63 2gtr_A CDY-like, chromodomain 100.0 1.1E-47 3.7E-52 396.2 20.0 249 3-290 4-260 (261)
64 1mj3_A Enoyl-COA hydratase, mi 100.0 2.3E-47 7.8E-52 393.3 21.2 250 2-291 2-257 (260)
65 3t8b_A 1,4-dihydroxy-2-naphtho 100.0 1.3E-47 4.5E-52 405.8 19.8 253 3-293 54-329 (334)
66 3h0u_A Putative enoyl-COA hydr 100.0 3.4E-47 1.2E-51 396.6 22.5 244 3-285 7-257 (289)
67 3isa_A Putative enoyl-COA hydr 100.0 1.8E-47 6E-52 392.6 19.3 242 5-293 8-250 (254)
68 3pe8_A Enoyl-COA hydratase; em 100.0 1.1E-47 3.6E-52 393.8 17.2 241 3-291 8-255 (256)
69 3he2_A Enoyl-COA hydratase ECH 100.0 6.5E-47 2.2E-51 388.6 20.2 239 3-292 20-262 (264)
70 4di1_A Enoyl-COA hydratase ECH 100.0 8.2E-47 2.8E-51 391.0 20.8 240 1-290 22-264 (277)
71 1hzd_A AUH, AU-binding protein 100.0 1.4E-46 4.7E-51 389.9 19.4 250 4-291 8-269 (272)
72 3bpt_A 3-hydroxyisobutyryl-COA 100.0 1.5E-45 5E-50 396.6 23.5 287 3-293 5-331 (363)
73 2q35_A CURF; crotonase, lyase; 100.0 6E-46 2E-50 378.6 16.8 235 6-284 5-243 (243)
74 3ju1_A Enoyl-COA hydratase/iso 100.0 1E-45 3.5E-50 401.6 17.6 283 4-293 42-376 (407)
75 1pjh_A Enoyl-COA isomerase; EC 100.0 3.2E-45 1.1E-49 381.5 19.5 242 1-292 6-268 (280)
76 3r6h_A Enoyl-COA hydratase, EC 100.0 1E-44 3.5E-49 367.2 17.7 227 1-268 3-232 (233)
77 2j5g_A ALR4455 protein; enzyme 100.0 1.9E-44 6.6E-49 370.7 18.6 236 3-288 22-263 (263)
78 3njd_A Enoyl-COA hydratase; ss 100.0 3.4E-43 1.1E-47 374.2 26.1 203 1-205 32-264 (333)
79 3ot6_A Enoyl-COA hydratase/iso 100.0 2.3E-44 7.9E-49 364.3 15.7 222 4-267 6-231 (232)
80 3m6n_A RPFF protein; enoyl-COA 100.0 3.6E-43 1.2E-47 369.4 24.5 253 3-293 29-301 (305)
81 2dpo_A L-gulonate 3-dehydrogen 100.0 6.3E-43 2.2E-47 369.5 25.6 245 303-548 4-256 (319)
82 2np9_A DPGC; protein inhibitor 100.0 1.3E-43 4.4E-48 384.1 17.6 243 4-288 167-439 (440)
83 3t3w_A Enoyl-COA hydratase; ss 100.0 1.6E-42 5.5E-47 360.4 21.1 201 1-203 17-223 (279)
84 1szo_A 6-oxocamphor hydrolase; 100.0 1E-42 3.6E-47 357.2 19.0 234 4-288 16-254 (257)
85 2w3p_A Benzoyl-COA-dihydrodiol 100.0 3.8E-38 1.3E-42 342.9 14.2 201 3-206 20-245 (556)
86 3mog_A Probable 3-hydroxybutyr 99.9 8.8E-23 3E-27 227.1 16.2 150 419-574 324-476 (483)
87 3ctv_A HBD-10, 3-hydroxyacyl-C 99.9 8.3E-24 2.8E-28 187.5 4.4 103 475-577 3-109 (110)
88 2ewd_A Lactate dehydrogenase,; 99.8 6.4E-20 2.2E-24 194.5 9.0 204 306-545 5-238 (317)
89 3bf0_A Protease 4; bacterial, 99.8 4.5E-20 1.5E-24 210.5 6.7 166 12-195 300-516 (593)
90 3tri_A Pyrroline-5-carboxylate 99.8 2.2E-18 7.5E-23 179.2 17.4 189 305-519 3-206 (280)
91 3rst_A Signal peptide peptidas 99.8 5.2E-18 1.8E-22 171.8 14.0 165 12-195 2-225 (240)
92 3ctv_A HBD-10, 3-hydroxyacyl-C 99.7 9.6E-19 3.3E-23 154.9 7.0 85 616-704 15-100 (110)
93 3d1l_A Putative NADP oxidoredu 99.7 9.2E-18 3.1E-22 173.5 14.1 211 306-546 11-247 (266)
94 3gt0_A Pyrroline-5-carboxylate 99.7 6.2E-17 2.1E-21 165.4 15.6 188 306-519 3-204 (247)
95 3viv_A 441AA long hypothetical 99.7 4.8E-17 1.6E-21 162.0 14.0 145 12-183 7-174 (230)
96 3ggo_A Prephenate dehydrogenas 99.7 2.8E-16 9.6E-21 165.9 19.2 166 303-494 31-215 (314)
97 3obb_A Probable 3-hydroxyisobu 99.7 6.2E-17 2.1E-21 169.5 12.6 188 304-523 2-213 (300)
98 2h78_A Hibadh, 3-hydroxyisobut 99.7 7.5E-17 2.6E-21 169.9 13.3 191 304-523 2-213 (302)
99 3doj_A AT3G25530, dehydrogenas 99.7 8.4E-17 2.9E-21 170.0 9.9 191 303-522 19-230 (310)
100 3qsg_A NAD-binding phosphogluc 99.7 1E-16 3.6E-21 169.4 9.1 189 302-522 21-231 (312)
101 3qha_A Putative oxidoreductase 99.6 3.9E-16 1.3E-20 163.8 11.9 184 306-519 16-222 (296)
102 3g0o_A 3-hydroxyisobutyrate de 99.6 1.5E-15 5.3E-20 159.8 16.3 191 305-522 7-218 (303)
103 2i76_A Hypothetical protein; N 99.6 2.8E-16 9.6E-21 163.2 10.5 210 306-551 3-240 (276)
104 3pef_A 6-phosphogluconate dehy 99.6 3E-16 1E-20 164.0 10.6 188 306-522 2-210 (287)
105 4gbj_A 6-phosphogluconate dehy 99.6 2.6E-16 9E-21 164.7 10.2 186 306-523 6-214 (297)
106 3pdu_A 3-hydroxyisobutyrate de 99.6 2.6E-16 8.8E-21 164.5 9.1 190 305-522 1-210 (287)
107 4dll_A 2-hydroxy-3-oxopropiona 99.6 1.2E-15 4.3E-20 161.7 13.1 190 304-523 30-239 (320)
108 3dfu_A Uncharacterized protein 99.6 1E-15 3.5E-20 152.4 9.7 159 304-515 5-173 (232)
109 3c24_A Putative oxidoreductase 99.6 7.3E-15 2.5E-19 153.4 16.0 188 305-519 11-228 (286)
110 2y0c_A BCEC, UDP-glucose dehyd 99.6 2.7E-15 9.2E-20 167.0 12.6 204 306-519 9-257 (478)
111 2izz_A Pyrroline-5-carboxylate 99.6 1E-14 3.5E-19 154.8 15.9 189 304-519 21-228 (322)
112 3g79_A NDP-N-acetyl-D-galactos 99.6 1.6E-14 5.6E-19 159.5 14.6 205 304-522 17-274 (478)
113 1yqg_A Pyrroline-5-carboxylate 99.6 1.4E-13 4.7E-18 141.8 19.7 183 306-519 1-196 (263)
114 4ezb_A Uncharacterized conserv 99.5 8.4E-14 2.9E-18 147.3 17.6 193 305-522 24-233 (317)
115 3l6d_A Putative oxidoreductase 99.5 2.2E-14 7.4E-19 151.2 12.4 189 304-521 8-214 (306)
116 2uyy_A N-PAC protein; long-cha 99.5 1.4E-14 4.7E-19 153.5 9.9 188 304-519 29-235 (316)
117 3ktd_A Prephenate dehydrogenas 99.5 2.1E-14 7.1E-19 152.4 11.1 154 304-485 7-187 (341)
118 3b1f_A Putative prephenate deh 99.5 6.9E-14 2.4E-18 146.2 14.8 159 303-485 4-181 (290)
119 1f0y_A HCDH, L-3-hydroxyacyl-C 99.5 1.8E-14 6.1E-19 151.6 9.8 90 617-710 203-301 (302)
120 1zej_A HBD-9, 3-hydroxyacyl-CO 99.5 3.9E-15 1.3E-19 154.5 4.6 93 619-713 174-274 (293)
121 3ojo_A CAP5O; rossmann fold, c 99.5 1.5E-13 5.2E-18 149.8 15.6 201 306-519 12-250 (431)
122 2ew2_A 2-dehydropantoate 2-red 99.5 4.9E-13 1.7E-17 141.2 18.3 168 305-486 3-184 (316)
123 2ahr_A Putative pyrroline carb 99.5 2.4E-13 8.2E-18 139.6 15.2 185 305-519 3-197 (259)
124 3cky_A 2-hydroxymethyl glutara 99.5 8.5E-14 2.9E-18 146.3 12.0 186 306-519 5-209 (301)
125 4a7p_A UDP-glucose dehydrogena 99.5 2.6E-13 8.9E-18 149.1 15.7 202 306-519 9-251 (446)
126 4e21_A 6-phosphogluconate dehy 99.5 4.7E-14 1.6E-18 151.1 9.4 174 305-508 22-233 (358)
127 3gg2_A Sugar dehydrogenase, UD 99.5 7.5E-13 2.6E-17 146.2 18.8 202 306-519 3-247 (450)
128 2q3e_A UDP-glucose 6-dehydroge 99.5 1.5E-13 5.2E-18 153.1 13.4 202 305-519 5-256 (467)
129 3pid_A UDP-glucose 6-dehydroge 99.5 4.6E-13 1.6E-17 145.8 16.5 196 304-519 35-268 (432)
130 2f1k_A Prephenate dehydrogenas 99.5 9.6E-13 3.3E-17 136.7 18.2 155 306-485 1-167 (279)
131 2gf2_A Hibadh, 3-hydroxyisobut 99.5 6.6E-14 2.3E-18 146.8 8.9 182 306-519 1-205 (296)
132 2g5c_A Prephenate dehydrogenas 99.5 7.1E-13 2.4E-17 137.8 16.7 155 305-485 1-173 (281)
133 2f9y_B Acetyl-coenzyme A carbo 99.5 1.2E-13 4.1E-18 143.4 10.4 157 15-201 120-281 (304)
134 1mv8_A GMD, GDP-mannose 6-dehy 99.5 2.2E-13 7.4E-18 150.6 13.1 201 306-519 1-245 (436)
135 1vpd_A Tartronate semialdehyde 99.5 3.3E-13 1.1E-17 141.7 13.7 188 306-519 6-210 (299)
136 3k96_A Glycerol-3-phosphate de 99.5 5.7E-13 2E-17 142.7 15.6 173 301-488 25-208 (356)
137 2o3j_A UDP-glucose 6-dehydroge 99.5 4.1E-13 1.4E-17 149.9 15.0 201 303-519 7-262 (481)
138 1zcj_A Peroxisomal bifunctiona 99.5 1.4E-13 4.7E-18 153.0 11.1 108 460-569 331-446 (463)
139 2rcy_A Pyrroline carboxylate r 99.4 5.4E-13 1.8E-17 137.2 14.0 147 305-485 4-156 (262)
140 1yb4_A Tartronic semialdehyde 99.4 1.2E-13 4E-18 144.8 8.6 182 305-519 3-207 (295)
141 4huj_A Uncharacterized protein 99.4 1.6E-13 5.4E-18 137.4 9.1 155 303-486 21-199 (220)
142 4gwg_A 6-phosphogluconate dehy 99.4 3.1E-13 1.1E-17 149.5 9.7 192 304-519 3-221 (484)
143 1y7o_A ATP-dependent CLP prote 99.4 6.1E-13 2.1E-17 132.1 10.8 137 27-185 53-214 (218)
144 4e12_A Diketoreductase; oxidor 99.4 6.7E-14 2.3E-18 145.7 3.7 89 616-710 188-283 (283)
145 2p4q_A 6-phosphogluconate dehy 99.4 7E-13 2.4E-17 148.1 11.3 190 306-519 11-226 (497)
146 2zyd_A 6-phosphogluconate dehy 99.4 1.4E-12 4.8E-17 145.2 13.5 192 303-519 13-231 (480)
147 2pv7_A T-protein [includes: ch 99.4 1.6E-12 5.6E-17 136.2 12.2 139 305-485 21-166 (298)
148 2iz1_A 6-phosphogluconate dehy 99.4 3.1E-12 1.1E-16 142.6 15.0 191 305-520 5-223 (474)
149 1np3_A Ketol-acid reductoisome 99.4 1.6E-12 5.5E-17 138.6 11.1 182 305-515 16-223 (338)
150 2cvz_A Dehydrogenase, 3-hydrox 99.4 2.7E-12 9.4E-17 133.8 12.7 184 305-519 1-200 (289)
151 3vtf_A UDP-glucose 6-dehydroge 99.4 8.6E-12 2.9E-16 135.7 16.4 204 304-524 20-271 (444)
152 1i36_A Conserved hypothetical 99.3 7.3E-12 2.5E-16 128.9 14.3 174 306-519 1-193 (264)
153 1jay_A Coenzyme F420H2:NADP+ o 99.3 6E-12 2.1E-16 125.0 12.5 157 306-485 1-181 (212)
154 3k6j_A Protein F01G10.3, confi 99.3 2.5E-12 8.7E-17 140.9 9.4 86 616-713 232-325 (460)
155 1pgj_A 6PGDH, 6-PGDH, 6-phosph 99.3 1.1E-11 3.8E-16 138.1 13.5 194 306-520 2-221 (478)
156 3dtt_A NADP oxidoreductase; st 99.3 1.6E-11 5.6E-16 124.8 13.4 167 304-486 18-214 (245)
157 2pgd_A 6-phosphogluconate dehy 99.3 1E-11 3.6E-16 138.6 11.9 191 306-520 3-220 (482)
158 1evy_A Glycerol-3-phosphate de 99.3 3.9E-12 1.3E-16 137.4 7.8 170 305-487 15-201 (366)
159 2f9i_A Acetyl-coenzyme A carbo 99.3 3.7E-11 1.3E-15 125.9 14.5 135 26-183 139-276 (327)
160 2hjr_A Malate dehydrogenase; m 99.3 7.8E-12 2.7E-16 132.5 9.4 122 306-441 15-155 (328)
161 2raf_A Putative dinucleotide-b 99.3 1.7E-11 5.8E-16 121.5 10.8 135 304-485 18-176 (209)
162 1dlj_A UDP-glucose dehydrogena 99.2 8.6E-11 2.9E-15 128.2 16.3 197 306-519 1-239 (402)
163 2wtb_A MFP2, fatty acid multif 99.2 8.7E-12 3E-16 145.4 8.4 89 616-711 493-589 (725)
164 2vns_A Metalloreductase steap3 99.2 1E-11 3.5E-16 123.7 7.4 151 304-485 27-194 (215)
165 1x0v_A GPD-C, GPDH-C, glycerol 99.2 1.8E-11 6.2E-16 131.5 9.7 171 304-488 7-201 (354)
166 1wdk_A Fatty oxidation complex 99.2 6E-12 2.1E-16 146.7 6.0 89 617-711 496-593 (715)
167 3zwc_A Peroxisomal bifunctiona 99.2 2.6E-11 8.9E-16 140.7 11.0 120 462-583 612-739 (742)
168 2f9y_A Acetyl-COA carboxylase, 99.2 7.2E-11 2.5E-15 124.0 13.4 135 26-183 153-290 (339)
169 1t2d_A LDH-P, L-lactate dehydr 99.2 2.1E-11 7.3E-16 128.7 9.1 123 305-441 4-150 (322)
170 1ks9_A KPA reductase;, 2-dehyd 99.2 1.7E-11 5.7E-16 127.8 6.8 168 306-496 1-179 (291)
171 1pzg_A LDH, lactate dehydrogen 99.2 2.8E-11 9.4E-16 128.4 8.4 123 305-441 9-156 (331)
172 1z82_A Glycerol-3-phosphate de 99.2 1.9E-10 6.6E-15 122.5 14.3 188 306-515 15-236 (335)
173 2qyt_A 2-dehydropantoate 2-red 99.1 1E-10 3.6E-15 123.4 10.9 168 304-486 7-194 (317)
174 1txg_A Glycerol-3-phosphate de 99.1 1.5E-10 5.1E-15 123.3 10.7 163 306-486 1-182 (335)
175 1yj8_A Glycerol-3-phosphate de 99.1 1.4E-10 4.8E-15 125.6 10.6 170 305-488 21-218 (375)
176 3fr7_A Putative ketol-acid red 99.1 1.6E-10 5.5E-15 124.9 9.4 155 305-481 54-232 (525)
177 3ghy_A Ketopantoate reductase 99.1 5.3E-10 1.8E-14 119.1 13.6 169 305-489 3-202 (335)
178 3hwr_A 2-dehydropantoate 2-red 99.1 6.6E-10 2.3E-14 117.4 14.2 174 304-497 18-201 (318)
179 1a5z_A L-lactate dehydrogenase 99.1 2.2E-10 7.6E-15 121.0 8.9 158 306-500 1-181 (319)
180 2i6t_A Ubiquitin-conjugating e 99.0 2.4E-10 8.3E-15 119.3 8.4 122 301-441 10-149 (303)
181 2yjz_A Metalloreductase steap4 98.5 5E-11 1.7E-15 117.2 0.0 148 306-485 20-182 (201)
182 1ur5_A Malate dehydrogenase; o 98.9 1.5E-09 5E-14 114.1 9.7 100 306-418 3-117 (309)
183 3hn2_A 2-dehydropantoate 2-red 98.9 8.2E-09 2.8E-13 108.7 15.4 174 306-497 3-190 (312)
184 2v6b_A L-LDH, L-lactate dehydr 98.9 1.8E-09 6E-14 113.3 8.3 120 306-441 1-138 (304)
185 3tl2_A Malate dehydrogenase; c 98.9 6.1E-09 2.1E-13 109.1 10.6 108 301-421 4-128 (315)
186 2cby_A ATP-dependent CLP prote 98.8 8.8E-09 3E-13 101.4 9.9 142 27-190 35-200 (208)
187 2d4a_B Malate dehydrogenase; a 98.8 7.1E-09 2.4E-13 108.6 9.5 120 307-441 1-140 (308)
188 3i83_A 2-dehydropantoate 2-red 98.8 1.5E-08 5.2E-13 107.1 11.8 171 306-494 3-189 (320)
189 3gvi_A Malate dehydrogenase; N 98.8 9.5E-09 3.2E-13 108.0 10.1 106 303-421 5-125 (324)
190 3ldh_A Lactate dehydrogenase; 98.8 6.7E-09 2.3E-13 108.9 8.2 104 304-421 20-139 (330)
191 3p7m_A Malate dehydrogenase; p 98.8 9.3E-09 3.2E-13 108.1 9.1 127 303-442 3-147 (321)
192 1hyh_A L-hicdh, L-2-hydroxyiso 98.8 1.7E-08 5.8E-13 106.1 11.1 122 305-441 1-146 (309)
193 1guz_A Malate dehydrogenase; o 98.8 3.7E-08 1.3E-12 103.4 12.2 102 306-420 1-118 (310)
194 2w2k_A D-mandelate dehydrogena 98.7 5.7E-09 2E-13 111.3 5.8 117 306-446 164-285 (348)
195 2gcg_A Glyoxylate reductase/hy 98.7 4.4E-09 1.5E-13 111.5 4.7 117 306-447 156-276 (330)
196 1lld_A L-lactate dehydrogenase 98.7 3.9E-08 1.3E-12 103.8 11.8 123 305-441 7-148 (319)
197 4fgw_A Glycerol-3-phosphate de 98.7 5.4E-09 1.8E-13 112.0 4.4 110 305-424 34-155 (391)
198 3ado_A Lambda-crystallin; L-gu 98.7 1.3E-08 4.3E-13 106.5 6.9 93 615-710 189-287 (319)
199 1obb_A Maltase, alpha-glucosid 98.7 6.7E-08 2.3E-12 106.4 12.1 123 305-441 3-173 (480)
200 1oju_A MDH, malate dehydrogena 98.7 5.4E-08 1.8E-12 100.9 10.7 103 306-421 1-119 (294)
201 1ldn_A L-lactate dehydrogenase 98.7 1.7E-08 5.9E-13 106.2 6.9 122 304-441 5-147 (316)
202 2dbq_A Glyoxylate reductase; D 98.7 5.2E-09 1.8E-13 111.1 2.7 116 305-446 150-269 (334)
203 3c7a_A Octopine dehydrogenase; 98.7 2.8E-08 9.6E-13 108.6 8.3 107 305-424 2-120 (404)
204 3ba1_A HPPR, hydroxyphenylpyru 98.7 5E-09 1.7E-13 110.8 2.2 111 306-445 165-279 (333)
205 1bg6_A N-(1-D-carboxylethyl)-L 98.6 6.5E-08 2.2E-12 103.7 10.6 105 305-421 4-110 (359)
206 2d0i_A Dehydrogenase; structur 98.6 1.5E-08 5.3E-13 107.3 3.9 113 306-445 147-263 (333)
207 1u8x_X Maltose-6'-phosphate gl 98.6 1.8E-07 6.2E-12 103.1 11.6 123 306-441 29-193 (472)
208 3ego_A Probable 2-dehydropanto 98.6 2.4E-07 8.2E-12 97.2 11.5 115 306-440 3-119 (307)
209 3fef_A Putative glucosidase LP 98.5 1E-07 3.6E-12 104.0 8.1 102 304-422 4-148 (450)
210 3nep_X Malate dehydrogenase; h 98.5 1.8E-07 6.1E-12 97.9 9.5 103 306-421 1-119 (314)
211 3g17_A Similar to 2-dehydropan 98.5 2.4E-08 8.2E-13 104.2 2.7 164 306-498 3-174 (294)
212 3gvx_A Glycerate dehydrogenase 98.5 3.1E-08 1E-12 102.4 3.2 125 306-459 123-256 (290)
213 2w3p_A Benzoyl-COA-dihydrodiol 98.5 6.1E-07 2.1E-11 98.3 13.3 197 3-207 265-499 (556)
214 3pqe_A L-LDH, L-lactate dehydr 98.5 2.8E-07 9.4E-12 97.0 9.8 104 303-421 3-123 (326)
215 4aj2_A L-lactate dehydrogenase 98.5 2.8E-07 9.5E-12 97.0 8.9 105 303-421 17-137 (331)
216 1ygy_A PGDH, D-3-phosphoglycer 98.4 1.5E-07 5.3E-12 105.9 6.7 149 306-480 143-308 (529)
217 1gdh_A D-glycerate dehydrogena 98.4 2.6E-07 8.8E-12 97.3 7.9 139 306-469 147-298 (320)
218 2x0j_A Malate dehydrogenase; o 98.4 1.2E-06 4E-11 90.6 10.8 104 306-422 1-120 (294)
219 3evt_A Phosphoglycerate dehydr 98.4 2.3E-07 7.8E-12 97.5 5.4 128 306-459 138-277 (324)
220 3qwd_A ATP-dependent CLP prote 98.3 2.9E-06 1E-10 82.6 12.3 136 27-184 35-193 (203)
221 4dgs_A Dehydrogenase; structur 98.3 3.7E-07 1.3E-11 96.4 6.3 110 306-444 172-285 (340)
222 3jtm_A Formate dehydrogenase, 98.3 4.4E-07 1.5E-11 96.4 6.6 104 306-433 165-271 (351)
223 1wwk_A Phosphoglycerate dehydr 98.3 6.3E-07 2.2E-11 93.7 7.6 136 306-467 143-291 (307)
224 2f6i_A ATP-dependent CLP prote 98.3 3E-06 1E-10 83.4 11.9 135 27-183 47-203 (215)
225 1yg6_A ATP-dependent CLP prote 98.3 1.1E-06 3.8E-11 85.4 8.2 136 27-183 34-191 (193)
226 3fi9_A Malate dehydrogenase; s 98.3 7.1E-07 2.4E-11 94.4 7.0 96 304-414 7-120 (343)
227 1qp8_A Formate dehydrogenase; 98.3 7.9E-07 2.7E-11 92.7 7.0 132 306-467 125-272 (303)
228 3gg9_A D-3-phosphoglycerate de 98.3 1.1E-06 3.9E-11 93.3 8.2 136 306-466 161-309 (352)
229 4g2n_A D-isomer specific 2-hyd 98.3 1E-06 3.6E-11 93.2 7.9 102 306-433 174-278 (345)
230 1s6y_A 6-phospho-beta-glucosid 98.3 3E-06 1E-10 92.9 11.7 123 306-441 8-174 (450)
231 3hg7_A D-isomer specific 2-hyd 98.3 5.2E-07 1.8E-11 94.6 5.4 128 306-459 141-280 (324)
232 3d0o_A L-LDH 1, L-lactate dehy 98.3 3.4E-06 1.2E-10 88.7 11.3 121 305-441 6-147 (317)
233 3pp8_A Glyoxylate/hydroxypyruv 98.3 5.6E-07 1.9E-11 94.2 5.2 128 306-459 140-279 (315)
234 3vku_A L-LDH, L-lactate dehydr 98.3 1E-06 3.5E-11 92.4 7.1 102 304-421 8-126 (326)
235 2ekl_A D-3-phosphoglycerate de 98.2 3.3E-07 1.1E-11 96.2 3.0 102 306-433 143-247 (313)
236 3k5p_A D-3-phosphoglycerate de 98.2 4E-06 1.4E-10 90.4 11.5 132 306-465 157-305 (416)
237 2g76_A 3-PGDH, D-3-phosphoglyc 98.2 1E-06 3.5E-11 93.0 6.1 101 306-432 166-269 (335)
238 1y6j_A L-lactate dehydrogenase 98.2 1.1E-06 3.9E-11 92.3 6.3 119 305-441 7-147 (318)
239 1sc6_A PGDH, D-3-phosphoglycer 98.2 9.6E-07 3.3E-11 95.6 5.3 100 306-433 146-248 (404)
240 2nac_A NAD-dependent formate d 98.2 1.1E-06 3.8E-11 94.4 5.7 131 306-460 192-334 (393)
241 2xxj_A L-LDH, L-lactate dehydr 98.2 3.7E-06 1.3E-10 88.0 9.2 100 306-420 1-116 (310)
242 2dpo_A L-gulonate 3-dehydrogen 98.2 2.3E-06 8E-11 89.8 7.6 73 616-689 190-268 (319)
243 1ez4_A Lactate dehydrogenase; 98.2 2.7E-06 9.2E-11 89.3 8.0 99 306-420 6-121 (318)
244 2cuk_A Glycerate dehydrogenase 98.2 1.3E-06 4.4E-11 91.5 5.5 125 306-461 145-280 (311)
245 3p2l_A ATP-dependent CLP prote 98.2 3.6E-06 1.2E-10 81.8 8.2 138 27-186 38-199 (201)
246 4hy3_A Phosphoglycerate oxidor 98.2 3.4E-06 1.2E-10 89.8 8.8 137 306-468 177-325 (365)
247 2zqz_A L-LDH, L-lactate dehydr 98.2 3E-06 1E-10 89.2 8.1 100 305-420 9-125 (326)
248 1mx3_A CTBP1, C-terminal bindi 98.1 2E-06 6.9E-11 91.2 5.9 102 306-432 169-273 (347)
249 1tg6_A Putative ATP-dependent 98.1 5.2E-06 1.8E-10 84.2 8.5 135 27-183 90-247 (277)
250 2pi1_A D-lactate dehydrogenase 98.1 1.3E-06 4.4E-11 92.3 3.6 101 306-433 142-245 (334)
251 2yq5_A D-isomer specific 2-hyd 98.1 2E-06 6.7E-11 91.0 4.8 111 306-444 149-263 (343)
252 1lss_A TRK system potassium up 98.1 3.4E-05 1.2E-09 70.1 12.1 97 306-419 5-102 (140)
253 4e5n_A Thermostable phosphite 98.0 2.3E-06 8E-11 90.2 4.5 102 306-432 146-250 (330)
254 2i99_A MU-crystallin homolog; 98.0 5.2E-06 1.8E-10 87.1 7.0 89 306-421 136-227 (312)
255 3llv_A Exopolyphosphatase-rela 98.0 3.3E-05 1.1E-09 70.6 11.6 105 305-427 6-111 (141)
256 2j6i_A Formate dehydrogenase; 98.0 2.1E-06 7.1E-11 91.8 3.2 104 306-433 165-272 (364)
257 1j4a_A D-LDH, D-lactate dehydr 98.0 3.3E-06 1.1E-10 89.3 4.0 101 306-433 147-250 (333)
258 1pix_A Glutaconyl-COA decarbox 97.9 8.8E-05 3E-09 83.2 13.1 170 15-201 107-286 (587)
259 3oet_A Erythronate-4-phosphate 97.8 2.7E-06 9.4E-11 90.7 0.5 111 306-445 120-238 (381)
260 3oj0_A Glutr, glutamyl-tRNA re 97.8 6.5E-06 2.2E-10 75.9 3.0 69 306-395 22-91 (144)
261 3ic5_A Putative saccharopine d 97.8 5E-05 1.7E-09 66.6 8.7 98 305-424 5-104 (118)
262 1up7_A 6-phospho-beta-glucosid 97.8 8.7E-05 3E-09 80.5 11.7 120 305-441 2-163 (417)
263 1dxy_A D-2-hydroxyisocaproate 97.8 4.9E-06 1.7E-10 87.9 1.6 100 306-433 146-248 (333)
264 1mld_A Malate dehydrogenase; o 97.8 9.6E-05 3.3E-09 77.4 11.3 94 306-418 1-115 (314)
265 2o4c_A Erythronate-4-phosphate 97.8 4.4E-06 1.5E-10 89.3 0.9 110 306-444 117-234 (380)
266 1o6z_A MDH, malate dehydrogena 97.8 6.5E-05 2.2E-09 78.3 9.8 119 306-441 1-143 (303)
267 2hk9_A Shikimate dehydrogenase 97.8 9.7E-06 3.3E-10 83.4 3.5 91 306-421 130-222 (275)
268 4gm2_A ATP-dependent CLP prote 97.7 6.7E-05 2.3E-09 72.6 8.7 141 27-184 36-205 (205)
269 3fwz_A Inner membrane protein 97.7 0.00019 6.5E-09 65.6 11.0 39 306-344 8-46 (140)
270 1smk_A Malate dehydrogenase, g 97.7 8.3E-05 2.8E-09 78.3 9.7 102 305-427 8-130 (326)
271 1y81_A Conserved hypothetical 97.7 6.5E-05 2.2E-09 68.6 7.7 81 305-417 14-99 (138)
272 3c85_A Putative glutathione-re 97.7 0.00014 4.8E-09 69.7 10.5 39 306-344 40-79 (183)
273 1xdw_A NAD+-dependent (R)-2-hy 97.7 6.2E-06 2.1E-10 87.1 0.1 100 306-433 147-249 (331)
274 2g1u_A Hypothetical protein TM 97.6 0.00014 4.6E-09 67.8 9.0 38 306-343 20-57 (155)
275 1b8p_A Protein (malate dehydro 97.6 8.3E-05 2.8E-09 78.4 8.2 102 305-420 5-133 (329)
276 2duw_A Putative COA-binding pr 97.6 5.9E-05 2E-09 69.5 6.0 101 306-440 14-122 (145)
277 2hmt_A YUAA protein; RCK, KTN, 97.6 0.00026 8.9E-09 64.3 10.0 39 305-343 6-44 (144)
278 3u95_A Glycoside hydrolase, fa 97.6 0.00011 3.8E-09 81.2 8.7 75 306-392 1-84 (477)
279 3d4o_A Dipicolinate synthase s 97.6 0.00017 5.8E-09 74.8 9.3 88 306-420 156-244 (293)
280 2rir_A Dipicolinate synthase, 97.6 9.3E-05 3.2E-09 77.0 7.1 88 306-420 158-246 (300)
281 3bf0_A Protease 4; bacterial, 97.5 0.00033 1.1E-08 79.7 11.9 141 32-191 71-271 (593)
282 3l4b_C TRKA K+ channel protien 97.5 0.00057 1.9E-08 67.4 11.3 95 306-417 1-97 (218)
283 3hhp_A Malate dehydrogenase; M 97.4 0.0003 1E-08 73.3 8.8 98 306-421 1-119 (312)
284 2d5c_A AROE, shikimate 5-dehyd 97.4 0.00022 7.6E-09 72.6 7.4 64 307-395 118-182 (263)
285 3qy9_A DHPR, dihydrodipicolina 97.4 0.00031 1.1E-08 70.4 8.1 87 304-426 2-89 (243)
286 3e9m_A Oxidoreductase, GFO/IDH 97.4 0.00046 1.6E-08 72.7 9.8 100 303-428 3-107 (330)
287 3q2i_A Dehydrogenase; rossmann 97.3 0.0009 3.1E-08 71.2 11.8 72 303-397 11-88 (354)
288 4h7p_A Malate dehydrogenase; s 97.3 0.00037 1.3E-08 73.5 8.5 104 305-422 24-152 (345)
289 1hye_A L-lactate/malate dehydr 97.3 0.00077 2.6E-08 70.5 10.9 102 306-421 1-123 (313)
290 3kb6_A D-lactate dehydrogenase 97.3 0.00046 1.6E-08 72.7 8.8 100 306-433 142-245 (334)
291 3d64_A Adenosylhomocysteinase; 97.3 0.00015 5E-09 79.9 5.0 88 306-422 278-366 (494)
292 1v8b_A Adenosylhomocysteinase; 97.3 0.00013 4.4E-09 80.0 4.2 96 306-430 258-357 (479)
293 3euw_A MYO-inositol dehydrogen 97.3 0.00099 3.4E-08 70.6 10.9 96 305-427 4-104 (344)
294 1x7d_A Ornithine cyclodeaminas 97.3 0.00046 1.6E-08 73.2 8.1 96 306-422 130-228 (350)
295 3ce6_A Adenosylhomocysteinase; 97.2 0.00044 1.5E-08 76.4 8.0 87 306-421 275-362 (494)
296 2dc1_A L-aspartate dehydrogena 97.2 0.0003 1E-08 70.4 6.1 78 307-421 2-82 (236)
297 3uuw_A Putative oxidoreductase 97.2 0.00068 2.3E-08 70.7 8.6 98 304-428 5-106 (308)
298 1omo_A Alanine dehydrogenase; 97.1 0.00081 2.8E-08 70.6 8.2 70 306-395 126-198 (322)
299 3h9u_A Adenosylhomocysteinase; 97.1 0.0003 1E-08 75.8 4.9 86 306-420 212-298 (436)
300 3n6r_B Propionyl-COA carboxyla 97.1 0.0081 2.8E-07 66.4 16.0 138 25-199 118-264 (531)
301 3hdj_A Probable ornithine cycl 97.1 0.00046 1.6E-08 72.0 5.8 91 306-422 122-215 (313)
302 1tlt_A Putative oxidoreductase 97.1 0.0012 4.2E-08 69.1 9.0 97 303-427 3-104 (319)
303 3u62_A Shikimate dehydrogenase 97.1 0.00018 6.3E-09 72.6 2.5 37 307-343 110-147 (253)
304 2ho3_A Oxidoreductase, GFO/IDH 97.1 0.0021 7.2E-08 67.4 10.7 95 306-427 2-101 (325)
305 3p2y_A Alanine dehydrogenase/p 97.0 0.00029 1E-08 74.9 3.6 104 306-420 185-302 (381)
306 1id1_A Putative potassium chan 97.0 0.0024 8.3E-08 58.9 9.5 38 306-343 4-42 (153)
307 2f9i_B Acetyl-coenzyme A carbo 97.0 0.018 6.2E-07 58.7 16.6 151 15-195 123-278 (285)
308 4hkt_A Inositol 2-dehydrogenas 97.0 0.0021 7.2E-08 67.6 10.1 96 305-428 3-103 (331)
309 1xea_A Oxidoreductase, GFO/IDH 97.0 0.0023 8E-08 67.0 10.4 95 306-427 3-102 (323)
310 3gvp_A Adenosylhomocysteinase 97.0 0.002 6.7E-08 69.3 9.5 87 306-421 221-308 (435)
311 3iav_A Propionyl-COA carboxyla 97.0 0.014 4.8E-07 64.5 16.6 138 25-197 110-258 (530)
312 4dio_A NAD(P) transhydrogenase 97.0 0.00036 1.2E-08 74.8 3.7 39 306-344 191-229 (405)
313 3ezy_A Dehydrogenase; structur 97.0 0.002 6.9E-08 68.2 9.5 97 306-428 3-104 (344)
314 3cea_A MYO-inositol 2-dehydrog 96.9 0.0037 1.3E-07 66.1 11.4 71 304-396 7-83 (346)
315 3rc1_A Sugar 3-ketoreductase; 96.9 0.0026 8.9E-08 67.5 10.2 100 302-428 24-129 (350)
316 5mdh_A Malate dehydrogenase; o 96.9 0.00047 1.6E-08 72.5 4.1 101 306-420 4-129 (333)
317 3n58_A Adenosylhomocysteinase; 96.9 0.0014 4.7E-08 70.6 7.4 87 306-422 248-335 (464)
318 3db2_A Putative NADPH-dependen 96.9 0.0023 7.7E-08 68.1 9.3 97 305-428 5-106 (354)
319 3c1a_A Putative oxidoreductase 96.9 0.002 6.9E-08 67.3 8.6 93 305-427 10-108 (315)
320 2egg_A AROE, shikimate 5-dehyd 96.9 0.00088 3E-08 69.4 5.6 39 306-344 142-181 (297)
321 2vhw_A Alanine dehydrogenase; 96.9 0.00036 1.2E-08 75.0 2.7 96 306-420 169-268 (377)
322 2z2v_A Hypothetical protein PH 96.9 0.0012 4.1E-08 70.5 6.7 90 305-420 16-108 (365)
323 3e18_A Oxidoreductase; dehydro 96.8 0.0027 9.3E-08 67.6 9.4 98 303-428 3-105 (359)
324 3ulk_A Ketol-acid reductoisome 96.8 0.0023 7.8E-08 68.3 8.4 186 306-514 38-249 (491)
325 2eez_A Alanine dehydrogenase; 96.8 0.0011 3.6E-08 71.1 5.9 98 306-420 167-266 (369)
326 3evn_A Oxidoreductase, GFO/IDH 96.8 0.0015 5E-08 68.8 6.8 101 302-428 2-107 (329)
327 7mdh_A Protein (malate dehydro 96.8 0.0039 1.3E-07 66.1 10.0 108 305-422 32-160 (375)
328 3phh_A Shikimate dehydrogenase 96.8 0.0013 4.5E-08 66.8 6.1 65 306-395 119-183 (269)
329 3ec7_A Putative dehydrogenase; 96.7 0.0038 1.3E-07 66.4 9.7 100 302-427 20-126 (357)
330 3u9r_B MCC beta, methylcrotony 96.7 0.029 1E-06 62.2 16.5 143 25-199 134-284 (555)
331 3mz0_A Inositol 2-dehydrogenas 96.7 0.0048 1.6E-07 65.3 10.0 95 306-427 3-105 (344)
332 2glx_A 1,5-anhydro-D-fructose 96.7 0.0054 1.9E-07 64.4 10.3 68 307-396 2-74 (332)
333 3m2t_A Probable dehydrogenase; 96.7 0.0025 8.7E-08 67.9 7.8 100 303-428 3-108 (359)
334 2bzr_A Propionyl-COA carboxyla 96.7 0.031 1.1E-06 62.2 16.5 134 25-193 121-265 (548)
335 2d59_A Hypothetical protein PH 96.7 0.006 2E-07 55.8 9.1 101 306-440 23-129 (144)
336 1iuk_A Hypothetical protein TT 96.7 0.0034 1.2E-07 57.2 7.2 103 306-440 14-122 (140)
337 1p77_A Shikimate 5-dehydrogena 96.6 0.0021 7.3E-08 65.6 6.5 40 306-345 120-159 (272)
338 1npy_A Hypothetical shikimate 96.6 0.0048 1.6E-07 62.9 8.9 65 306-394 120-185 (271)
339 3o8q_A Shikimate 5-dehydrogena 96.6 0.0022 7.7E-08 65.7 6.4 40 306-345 127-167 (281)
340 1on3_A Methylmalonyl-COA carbo 96.6 0.032 1.1E-06 61.8 15.6 148 15-195 97-253 (523)
341 3l9w_A Glutathione-regulated p 96.6 0.0083 2.8E-07 65.0 10.8 39 306-344 5-43 (413)
342 1nyt_A Shikimate 5-dehydrogena 96.6 0.004 1.4E-07 63.5 7.9 39 306-344 120-158 (271)
343 1leh_A Leucine dehydrogenase; 96.6 0.0045 1.6E-07 65.7 8.4 39 306-344 174-212 (364)
344 1x0u_A Hypothetical methylmalo 96.5 0.035 1.2E-06 61.6 15.5 140 25-197 104-253 (522)
345 3abi_A Putative uncharacterize 96.5 0.0033 1.1E-07 67.2 7.1 39 305-344 16-54 (365)
346 1jw9_B Molybdopterin biosynthe 96.4 0.0041 1.4E-07 62.6 6.7 33 306-338 32-65 (249)
347 3don_A Shikimate dehydrogenase 96.4 0.00054 1.9E-08 70.1 0.2 38 306-343 118-156 (277)
348 3jyo_A Quinate/shikimate dehyd 96.4 0.0035 1.2E-07 64.3 6.2 43 306-348 128-171 (283)
349 3bio_A Oxidoreductase, GFO/IDH 96.4 0.0048 1.6E-07 64.1 7.3 84 305-418 9-94 (304)
350 3ond_A Adenosylhomocysteinase; 96.4 0.0054 1.8E-07 67.1 7.9 87 306-420 266-352 (488)
351 1ydw_A AX110P-like protein; st 96.3 0.016 5.4E-07 61.7 11.2 73 305-396 6-83 (362)
352 1gpj_A Glutamyl-tRNA reductase 96.3 0.0026 8.9E-08 68.9 5.0 70 306-396 168-239 (404)
353 3upl_A Oxidoreductase; rossman 96.3 0.0082 2.8E-07 65.1 8.7 153 306-484 24-190 (446)
354 1x0u_A Hypothetical methylmalo 96.2 0.068 2.3E-06 59.3 15.6 158 26-199 339-507 (522)
355 2p2s_A Putative oxidoreductase 96.2 0.014 4.9E-07 61.3 9.8 71 305-397 4-79 (336)
356 3pwz_A Shikimate dehydrogenase 96.2 0.0093 3.2E-07 60.7 8.0 40 306-345 121-161 (272)
357 4g65_A TRK system potassium up 96.1 0.0094 3.2E-07 65.6 8.3 40 306-345 4-43 (461)
358 3fbt_A Chorismate mutase and s 96.1 0.0067 2.3E-07 62.0 6.4 39 306-344 123-162 (282)
359 1x13_A NAD(P) transhydrogenase 96.1 0.0028 9.6E-08 68.5 3.6 39 306-344 173-211 (401)
360 4had_A Probable oxidoreductase 96.1 0.0089 3E-07 63.2 7.4 73 303-397 21-99 (350)
361 1h6d_A Precursor form of gluco 96.0 0.019 6.7E-07 62.6 10.1 77 303-397 81-163 (433)
362 3ius_A Uncharacterized conserv 96.0 0.017 5.7E-07 58.9 9.0 39 305-343 5-43 (286)
363 1pjc_A Protein (L-alanine dehy 96.0 0.0044 1.5E-07 66.1 4.7 97 306-420 168-267 (361)
364 1dih_A Dihydrodipicolinate red 96.0 0.0073 2.5E-07 61.6 5.9 102 303-425 3-108 (273)
365 3ohs_X Trans-1,2-dihydrobenzen 96.0 0.021 7.3E-07 59.9 9.8 97 306-428 3-106 (334)
366 2b0j_A 5,10-methenyltetrahydro 96.0 0.091 3.1E-06 52.3 13.2 109 373-484 129-242 (358)
367 4f3y_A DHPR, dihydrodipicolina 95.9 0.0035 1.2E-07 63.8 3.3 102 303-426 5-110 (272)
368 3u3x_A Oxidoreductase; structu 95.9 0.047 1.6E-06 58.0 12.2 98 305-428 26-128 (361)
369 3dfz_A SIRC, precorrin-2 dehyd 95.9 0.029 9.8E-07 55.2 9.5 130 306-475 32-163 (223)
370 3gdo_A Uncharacterized oxidore 95.9 0.021 7.2E-07 60.6 9.3 70 303-397 3-78 (358)
371 1ff9_A Saccharopine reductase; 95.9 0.009 3.1E-07 65.6 6.5 40 304-343 2-41 (450)
372 1nvt_A Shikimate 5'-dehydrogen 95.9 0.013 4.5E-07 60.2 7.4 74 306-393 129-202 (287)
373 1f06_A MESO-diaminopimelate D- 95.8 0.0069 2.4E-07 63.4 5.2 92 305-428 3-98 (320)
374 3e82_A Putative oxidoreductase 95.8 0.027 9.4E-07 59.9 9.8 69 304-397 6-80 (364)
375 2aef_A Calcium-gated potassium 95.8 0.013 4.5E-07 58.0 6.8 38 306-344 10-47 (234)
376 1l7d_A Nicotinamide nucleotide 95.8 0.0056 1.9E-07 65.8 4.2 39 306-344 173-211 (384)
377 4gqa_A NAD binding oxidoreduct 95.7 0.023 8E-07 61.5 9.1 69 307-397 28-109 (412)
378 1y7t_A Malate dehydrogenase; N 95.7 0.017 5.9E-07 60.5 7.6 33 306-338 5-45 (327)
379 3tum_A Shikimate dehydrogenase 95.7 0.027 9.3E-07 57.1 8.7 70 306-393 126-196 (269)
380 1vrg_A Propionyl-COA carboxyla 95.6 0.13 4.3E-06 57.1 14.6 146 15-193 100-255 (527)
381 2ixa_A Alpha-N-acetylgalactosa 95.6 0.05 1.7E-06 59.5 11.2 78 303-397 18-104 (444)
382 4ina_A Saccharopine dehydrogen 95.6 0.025 8.6E-07 61.1 8.6 42 305-346 1-45 (405)
383 3fhl_A Putative oxidoreductase 95.6 0.014 4.8E-07 62.1 6.4 71 302-397 2-78 (362)
384 3e8x_A Putative NAD-dependent 95.6 0.062 2.1E-06 53.0 10.8 39 305-343 21-60 (236)
385 3tnl_A Shikimate dehydrogenase 95.5 0.0093 3.2E-07 62.0 4.6 41 306-346 155-199 (315)
386 3t4e_A Quinate/shikimate dehyd 95.5 0.01 3.5E-07 61.6 4.8 40 306-345 149-192 (312)
387 3btv_A Galactose/lactose metab 95.5 0.049 1.7E-06 59.5 10.5 72 304-395 19-100 (438)
388 3h2s_A Putative NADH-flavin re 95.4 0.0061 2.1E-07 59.7 2.8 38 306-343 1-39 (224)
389 3eag_A UDP-N-acetylmuramate:L- 95.4 0.027 9.3E-07 59.0 8.0 35 304-338 3-38 (326)
390 3r6d_A NAD-dependent epimerase 95.4 0.04 1.4E-06 53.7 8.7 39 305-343 5-46 (221)
391 1zud_1 Adenylyltransferase THI 95.4 0.04 1.4E-06 55.3 8.6 33 306-338 29-62 (251)
392 4a26_A Putative C-1-tetrahydro 95.3 0.016 5.6E-07 59.1 5.5 75 306-422 166-241 (300)
393 3ngx_A Bifunctional protein fo 95.3 0.011 3.9E-07 59.5 4.1 73 306-422 151-224 (276)
394 1zh8_A Oxidoreductase; TM0312, 95.2 0.065 2.2E-06 56.4 10.2 72 304-397 17-95 (340)
395 3ew7_A LMO0794 protein; Q8Y8U8 95.2 0.03 1E-06 54.4 7.0 38 306-343 1-39 (221)
396 2axq_A Saccharopine dehydrogen 95.2 0.026 8.9E-07 62.1 7.1 41 304-344 22-63 (467)
397 3moi_A Probable dehydrogenase; 95.1 0.046 1.6E-06 58.7 8.7 69 306-397 3-77 (387)
398 2vt3_A REX, redox-sensing tran 95.1 0.013 4.4E-07 57.3 3.9 78 306-408 86-167 (215)
399 2yyy_A Glyceraldehyde-3-phosph 95.1 0.077 2.6E-06 55.8 10.1 109 305-422 2-115 (343)
400 1a4i_A Methylenetetrahydrofola 95.1 0.024 8.3E-07 57.8 5.9 73 306-422 166-239 (301)
401 4hv4_A UDP-N-acetylmuramate--L 95.0 0.078 2.7E-06 58.8 10.5 37 303-339 20-57 (494)
402 3fpf_A Mtnas, putative unchara 95.0 0.15 5.2E-06 52.2 11.6 95 306-419 124-221 (298)
403 3dr3_A N-acetyl-gamma-glutamyl 95.0 0.047 1.6E-06 57.2 7.9 100 305-425 4-111 (337)
404 3dty_A Oxidoreductase, GFO/IDH 94.9 0.063 2.2E-06 57.8 9.1 75 303-397 10-98 (398)
405 3ff4_A Uncharacterized protein 94.9 0.033 1.1E-06 49.2 5.6 81 305-417 4-88 (122)
406 2nvw_A Galactose/lactose metab 94.9 0.077 2.6E-06 58.6 9.9 74 303-396 37-120 (479)
407 3p2o_A Bifunctional protein fo 94.8 0.027 9.3E-07 57.1 5.4 73 306-422 161-234 (285)
408 3kux_A Putative oxidoreductase 94.7 0.06 2E-06 56.9 8.2 69 305-398 7-81 (352)
409 1nvm_B Acetaldehyde dehydrogen 94.7 0.052 1.8E-06 56.4 7.5 36 305-340 4-42 (312)
410 1edz_A 5,10-methylenetetrahydr 94.7 0.024 8.3E-07 58.7 4.9 91 306-423 178-278 (320)
411 3lk7_A UDP-N-acetylmuramoylala 94.6 0.099 3.4E-06 57.3 10.0 35 305-339 9-43 (451)
412 3l07_A Bifunctional protein fo 94.6 0.03 1E-06 56.7 5.3 73 306-422 162-235 (285)
413 3k8x_A Acetyl-COA carboxylase; 94.6 0.077 2.6E-06 60.4 9.0 82 97-200 245-334 (758)
414 1b0a_A Protein (fold bifunctio 94.6 0.018 6.3E-07 58.4 3.5 73 306-422 160-233 (288)
415 4b4o_A Epimerase family protei 94.5 0.03 1E-06 57.5 5.2 34 306-339 1-35 (298)
416 3qvo_A NMRA family protein; st 94.5 0.014 4.9E-07 57.8 2.5 40 302-341 20-61 (236)
417 1cf2_P Protein (glyceraldehyde 94.5 0.081 2.8E-06 55.5 8.3 37 306-342 2-40 (337)
418 3dhn_A NAD-dependent epimerase 94.4 0.026 9E-07 55.2 4.3 37 305-341 4-41 (227)
419 3v5n_A Oxidoreductase; structu 94.4 0.078 2.7E-06 57.5 8.4 74 304-397 36-123 (417)
420 3f4l_A Putative oxidoreductase 94.3 0.042 1.4E-06 58.0 5.6 69 306-397 3-78 (345)
421 4a5o_A Bifunctional protein fo 94.3 0.037 1.3E-06 56.1 4.9 73 306-422 162-235 (286)
422 3h8v_A Ubiquitin-like modifier 94.2 0.038 1.3E-06 56.6 4.9 33 306-338 37-70 (292)
423 4gmf_A Yersiniabactin biosynth 94.2 0.074 2.5E-06 56.6 7.3 67 306-396 8-78 (372)
424 2c2x_A Methylenetetrahydrofola 94.1 0.033 1.1E-06 56.3 4.1 72 306-421 159-233 (281)
425 3oa2_A WBPB; oxidoreductase, s 94.0 0.11 3.8E-06 54.0 8.3 36 305-340 3-40 (318)
426 1y1p_A ARII, aldehyde reductas 94.0 0.25 8.7E-06 51.2 11.2 40 305-344 11-51 (342)
427 3kkj_A Amine oxidase, flavin-c 93.9 0.028 9.5E-07 55.5 3.2 32 307-338 4-35 (336)
428 3o9z_A Lipopolysaccaride biosy 93.8 0.13 4.4E-06 53.4 8.3 36 305-340 3-40 (312)
429 2ejw_A HDH, homoserine dehydro 93.8 0.06 2.1E-06 56.3 5.6 65 305-395 3-77 (332)
430 3ijp_A DHPR, dihydrodipicolina 93.8 0.059 2E-06 55.0 5.3 100 305-425 21-124 (288)
431 4hb9_A Similarities with proba 93.7 0.028 9.7E-07 60.2 3.1 34 306-339 2-35 (412)
432 1lu9_A Methylene tetrahydromet 93.7 0.11 3.9E-06 53.1 7.5 41 306-346 120-161 (287)
433 4fb5_A Probable oxidoreductase 93.7 0.063 2.2E-06 57.3 5.8 70 307-398 27-108 (393)
434 3hsk_A Aspartate-semialdehyde 93.7 0.26 9E-06 52.3 10.4 154 303-477 17-189 (381)
435 3dqp_A Oxidoreductase YLBE; al 93.7 0.066 2.3E-06 52.1 5.4 35 307-341 2-37 (219)
436 1vrg_A Propionyl-COA carboxyla 93.6 0.73 2.5E-05 51.0 14.2 159 26-200 344-513 (527)
437 2czc_A Glyceraldehyde-3-phosph 93.6 0.11 3.8E-06 54.5 7.3 85 306-397 3-92 (334)
438 3gf3_A Glutaconyl-COA decarbox 93.6 1.1 3.7E-05 50.1 15.5 162 25-199 119-287 (588)
439 3do5_A HOM, homoserine dehydro 93.6 0.034 1.2E-06 58.1 3.2 36 305-340 2-47 (327)
440 2x24_A Acetyl-COA carboxylase; 93.5 0.17 5.7E-06 58.2 9.0 82 97-200 258-347 (793)
441 3h5n_A MCCB protein; ubiquitin 93.5 0.14 4.6E-06 54.2 7.9 33 306-338 119-152 (353)
442 4ew6_A D-galactose-1-dehydroge 93.5 0.15 5.3E-06 53.2 8.2 72 302-405 22-100 (330)
443 3iav_A Propionyl-COA carboxyla 93.4 1.7 5.6E-05 48.1 16.5 162 18-198 336-514 (530)
444 2nu8_A Succinyl-COA ligase [AD 93.3 0.11 3.7E-06 53.3 6.4 93 305-427 7-103 (288)
445 1vl6_A Malate oxidoreductase; 93.2 0.021 7.2E-07 60.4 1.0 32 306-337 193-225 (388)
446 3e5r_O PP38, glyceraldehyde-3- 93.2 0.12 4.1E-06 54.2 6.7 30 306-335 4-34 (337)
447 2bzr_A Propionyl-COA carboxyla 93.2 1.1 3.8E-05 49.7 14.9 158 21-196 354-530 (548)
448 4h3v_A Oxidoreductase domain p 93.2 0.061 2.1E-06 57.4 4.7 70 307-398 8-89 (390)
449 2gas_A Isoflavone reductase; N 93.1 0.11 3.7E-06 53.3 6.3 34 305-338 2-36 (307)
450 1p9l_A Dihydrodipicolinate red 93.1 0.28 9.5E-06 48.8 8.9 31 307-337 2-35 (245)
451 3mtj_A Homoserine dehydrogenas 93.1 0.15 5.2E-06 55.3 7.5 64 306-394 11-88 (444)
452 3c1o_A Eugenol synthase; pheny 93.1 0.14 4.7E-06 53.0 7.0 34 305-338 4-38 (321)
453 3oqb_A Oxidoreductase; structu 93.0 0.066 2.3E-06 57.2 4.6 73 303-397 4-96 (383)
454 2ozp_A N-acetyl-gamma-glutamyl 93.0 0.1 3.4E-06 55.0 5.8 98 305-424 4-103 (345)
455 1on3_A Methylmalonyl-COA carbo 92.9 0.91 3.1E-05 50.2 13.6 163 21-199 333-508 (523)
456 3i6i_A Putative leucoanthocyan 92.9 0.18 6.3E-06 52.7 7.8 36 303-338 8-44 (346)
457 3n6r_B Propionyl-COA carboxyla 92.9 1.1 3.7E-05 49.5 14.1 159 18-194 342-511 (531)
458 1pix_A Glutaconyl-COA decarbox 92.9 0.49 1.7E-05 53.0 11.4 158 26-201 385-563 (587)
459 3oh8_A Nucleoside-diphosphate 92.8 0.092 3.1E-06 58.6 5.6 36 305-340 147-183 (516)
460 1b7g_O Protein (glyceraldehyde 92.7 0.14 4.8E-06 53.7 6.4 102 306-422 2-110 (340)
461 3gpi_A NAD-dependent epimerase 92.6 0.062 2.1E-06 54.7 3.4 37 304-340 2-38 (286)
462 2r6j_A Eugenol synthase 1; phe 92.4 0.11 3.7E-06 53.7 5.1 34 306-339 12-46 (318)
463 1qyc_A Phenylcoumaran benzylic 92.4 0.15 5.2E-06 52.2 6.2 34 305-338 4-38 (308)
464 2dt5_A AT-rich DNA-binding pro 92.3 0.05 1.7E-06 53.0 2.2 78 306-408 81-162 (211)
465 1lnq_A MTHK channels, potassiu 92.3 0.15 5.1E-06 53.4 6.0 36 306-342 116-151 (336)
466 4dgk_A Phytoene dehydrogenase; 92.3 0.056 1.9E-06 59.8 2.9 35 305-339 1-35 (501)
467 3ruf_A WBGU; rossmann fold, UD 92.2 0.15 5.1E-06 53.4 6.0 35 305-339 25-60 (351)
468 1ys4_A Aspartate-semialdehyde 92.2 0.098 3.4E-06 55.3 4.5 104 306-423 9-117 (354)
469 3oz2_A Digeranylgeranylglycero 92.2 0.068 2.3E-06 56.7 3.2 33 307-339 6-38 (397)
470 1xyg_A Putative N-acetyl-gamma 92.2 0.15 5.1E-06 54.0 5.8 99 305-424 16-116 (359)
471 1c1d_A L-phenylalanine dehydro 92.2 0.25 8.4E-06 52.0 7.4 35 306-340 176-210 (355)
472 1qyd_A Pinoresinol-lariciresin 92.1 0.19 6.7E-06 51.5 6.6 34 305-338 4-38 (313)
473 3i23_A Oxidoreductase, GFO/IDH 92.1 0.24 8.3E-06 52.1 7.4 70 306-397 3-78 (349)
474 2ywl_A Thioredoxin reductase r 92.0 0.097 3.3E-06 49.1 3.8 33 306-338 2-34 (180)
475 2vou_A 2,6-dihydroxypyridine h 92.0 0.086 3E-06 56.5 3.8 35 305-339 5-39 (397)
476 3keo_A Redox-sensing transcrip 91.9 0.039 1.3E-06 53.7 0.9 80 305-409 84-171 (212)
477 1c0p_A D-amino acid oxidase; a 91.9 0.1 3.6E-06 55.0 4.3 33 306-338 7-39 (363)
478 1u8f_O GAPDH, glyceraldehyde-3 91.9 0.32 1.1E-05 50.8 7.9 37 306-342 4-44 (335)
479 1y8q_B Anthracycline-, ubiquit 91.9 0.042 1.4E-06 62.2 1.2 33 306-338 18-51 (640)
480 3qj4_A Renalase; FAD/NAD(P)-bi 91.8 0.068 2.3E-06 56.0 2.7 34 305-338 1-37 (342)
481 2ep5_A 350AA long hypothetical 91.8 0.47 1.6E-05 50.0 9.2 104 305-423 4-111 (350)
482 3ing_A Homoserine dehydrogenas 91.7 0.14 4.7E-06 53.4 4.8 37 507-544 183-219 (325)
483 1j5p_A Aspartate dehydrogenase 91.6 0.28 9.6E-06 48.8 6.7 76 305-418 12-89 (253)
484 3m2p_A UDP-N-acetylglucosamine 91.5 0.52 1.8E-05 48.3 9.1 35 306-340 3-38 (311)
485 3cps_A Glyceraldehyde 3-phosph 91.5 0.54 1.9E-05 49.3 9.1 152 304-479 16-187 (354)
486 1oi7_A Succinyl-COA synthetase 91.3 0.12 4E-06 53.0 3.7 92 305-426 7-102 (288)
487 1yvv_A Amine oxidase, flavin-c 91.2 0.1 3.5E-06 54.2 3.3 33 306-338 3-35 (336)
488 2nqt_A N-acetyl-gamma-glutamyl 91.2 0.12 4.2E-06 54.4 3.8 101 303-425 7-115 (352)
489 2jl1_A Triphenylmethane reduct 91.1 0.22 7.5E-06 50.4 5.7 37 306-342 1-40 (287)
490 3b1j_A Glyceraldehyde 3-phosph 91.1 0.77 2.6E-05 47.9 9.8 30 306-335 3-35 (339)
491 3ged_A Short-chain dehydrogena 91.1 0.7 2.4E-05 46.0 9.1 37 307-343 4-41 (247)
492 4fn4_A Short chain dehydrogena 91.1 1.2 4.2E-05 44.4 10.9 41 307-347 8-50 (254)
493 4g65_A TRK system potassium up 91.0 0.85 2.9E-05 49.9 10.6 93 304-417 234-331 (461)
494 2aqj_A Tryptophan halogenase, 91.0 0.12 4.2E-06 57.8 3.9 35 304-338 4-41 (538)
495 3pwk_A Aspartate-semialdehyde 91.0 0.59 2E-05 49.3 8.8 142 306-483 3-151 (366)
496 4gx0_A TRKA domain protein; me 90.9 0.11 3.7E-06 58.7 3.4 98 298-417 342-440 (565)
497 2r00_A Aspartate-semialdehyde 90.9 0.49 1.7E-05 49.5 8.2 144 305-483 3-154 (336)
498 3nix_A Flavoprotein/dehydrogen 90.8 0.11 3.9E-06 55.8 3.3 33 306-338 6-38 (421)
499 1t4b_A Aspartate-semialdehyde 90.7 0.26 8.8E-06 52.3 5.8 96 305-425 1-103 (367)
500 3ihm_A Styrene monooxygenase A 90.7 0.11 3.7E-06 56.5 3.0 33 306-338 23-55 (430)
No 1
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=100.00 E-value=1.9e-133 Score=1161.08 Aligned_cols=685 Identities=34% Similarity=0.559 Sum_probs=610.4
Q ss_pred EEEecCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccCCCcccccchHHH
Q 004972 8 MEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSV 87 (721)
Q Consensus 8 ~~~~~~~v~~i~l~~p~~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~ 87 (721)
++. +++|++||||||+.|+||.+|+++|.+++++++.|+++|+|||||.|+.||+|+||+++...... ....
T Consensus 25 ~~~-~~~Va~itlnrP~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aGaDl~~~~~~~~~-------~~~~ 96 (742)
T 3zwc_A 25 LRL-PHSLAMIRLCNPPVNAVSPTVIREVRNGLQKAGSDHTVKAIVICGANGNFCAGADIHGFSAFTPG-------LALG 96 (742)
T ss_dssp EEC-STTEEEEEECCTTTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESTTCSBCCBCSSSCCSSCSC-------SHHH
T ss_pred EEe-eCCEEEEEeCCCcccCCCHHHHHHHHHHHHHHhhCCCCeEEEEECCCCccccCcChHhhhccChh-------HHHH
Confidence 445 79999999999999999999999999999999999999999999999999999999998653221 1234
Q ss_pred HHHHHHHhhCCCcEEEEECCcccccchHhhhhcCEEEeeCCceEeCcccccCcccc---ccccccccCHHHHHHHHHcCC
Q 004972 88 ELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSK 164 (721)
Q Consensus 88 ~~~~~~l~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~a~~~~pe~~~Gl~P~---~~~l~r~~G~~~a~~l~ltg~ 164 (721)
.++ +.|.++||||||+|||+|+||||+|+|+||||||+++++|++||+++|++|+ +++|+|++|..+|++|++||+
T Consensus 97 ~~~-~~i~~~~kPvIAai~G~a~GGG~elalacD~ria~~~a~fg~pev~lGl~Pg~ggt~rL~rlvG~~~A~~l~ltG~ 175 (742)
T 3zwc_A 97 SLV-DEIQRYQKPVLAAIQGVALGGGLELALGCHYRIANAKARVGLPEVTLGILPGARGTQLLPRVVGVPVALDLITSGK 175 (742)
T ss_dssp HHH-HHHHHCSSCEEEEECSEEETHHHHHHHTSSEEEEETTCEEECGGGGGTCCCTTTHHHHHHHHHCHHHHHHHHHHCC
T ss_pred HHH-HHHHhCCCCEEEEECccchHHHHHHHHhcCEEEEcCCCEEECcccCcccCCCccHHHHHHHhhhHHHHHHHHHcCC
Confidence 566 6799999999999999999999999999999999999999999999999997 999999999999999999999
Q ss_pred CcCHHHHHHcCCccEEcCCchHHHHHHHHHHHHHhcCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCCChhHHHH
Q 004972 165 SITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 244 (721)
Q Consensus 165 ~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~ 244 (721)
+++|+||+++||||+|+|++. .++|.++|++++++++...+...+. ..........+..+....+++.++|+|+..+
T Consensus 176 ~i~a~eA~~~GLv~~vv~~d~-~~~A~~~A~~ia~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~k~~~~~~A~~~~ 252 (742)
T 3zwc_A 176 YLSADEALRLGILDAVVKSDP-VEEAIKFAQKIIDKPIEPRRIFNKP--VPSLPNMDSVFAEAIAKVRKQYPGVLAPETC 252 (742)
T ss_dssp CEEHHHHHHHTSCSEEESSCH-HHHHHHHHHHHTTSCSGGGCGGGSC--CCCCTTHHHHHHHHHHHHHHHSTTCHHHHHH
T ss_pred chhHHHHHHcCCccEecCchh-hHHHHHHHHHHhcCCchhhhhhccc--ccccchhhhhHHHHHHHHhhhccchhHHHHH
Confidence 999999999999999998765 5789999999999887554433222 2222222334444555666788899999999
Q ss_pred HHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcCCCCCC---CCCCCCCCceeEEEEcCCCCcHHHH
Q 004972 245 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT---DIGLKPRGVRKVAVIGGGLMGSGIA 321 (721)
Q Consensus 245 ~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~~~~~~---~~~~~~~~~~kI~VIG~G~mG~~iA 321 (721)
+++++.+...+++++++.|.+.|.+++.|+++++++++|+++|+.+|.+... ..+..+++++||+|||+|.||++||
T Consensus 253 ~~~v~~~~~~~~~~gl~~E~~~F~~l~~s~~~k~~~~aFf~~r~~~k~~~~~~~~~~~~~~~~i~~v~ViGaG~MG~gIA 332 (742)
T 3zwc_A 253 VRSIQASVKHPYEVGIKEEEKLFMYLRASGQAKALQYAFFAEKSANKWSTPSGASWKTASAQPVSSVGVLGLGTMGRGIA 332 (742)
T ss_dssp HHHHHHHHHSCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHTTSCBCTTCCBTTTCCCCCCCEEEEECCSHHHHHHH
T ss_pred HHHHHHHhhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhcccccccccccccccCcccccEEEEEcccHHHHHHH
Confidence 9999999999999999999999999999999999999999999998865421 2244567899999999999999999
Q ss_pred HHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCccccCCCCEEEEcccCChHHHHH
Q 004972 322 TAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQK 401 (721)
Q Consensus 322 ~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~aDlVIeavpe~~~~k~~ 401 (721)
..++++|++|+++|++++.++++.+.+...++..+.++..+.. .....+++.+++++.+++||+|||||||++++|++
T Consensus 333 ~~~a~aG~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~aDlVIEAV~E~l~iK~~ 410 (742)
T 3zwc_A 333 ISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQ--ASAKPKLRFSSSTKELSTVDLVVEAVFEDMNLKKK 410 (742)
T ss_dssp HHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTC--CCCCCCEEEESCGGGGGSCSEEEECCCSCHHHHHH
T ss_pred HHHHhCCCchhcccchHhhhhhHHHHHHHHHHHHHHhccccch--hhhhhhhcccCcHHHHhhCCEEEEeccccHHHHHH
Confidence 9999999999999999999999999999888887766544322 23446788899999999999999999999999999
Q ss_pred HHHHHHhhCCCCeEEEecCCCCCHHHHhcccCCCCcEEEecCCCCCCCCCeeEEecCCCCCHHHHHHHHHHHHHcCCeeE
Q 004972 402 IFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 481 (721)
Q Consensus 402 v~~~l~~~~~~~~ii~s~ts~~~i~~l~~~~~~~~r~ig~h~~~p~~~~~lvEiv~~~~t~~e~~~~~~~l~~~lG~~~v 481 (721)
+|+++++++++++||+||||+++++++++.+.+|+||+|+|||||++.|++||||+++.|++++++.+..|.+.+||+||
T Consensus 411 vf~~le~~~~~~aIlASNTSsl~i~~ia~~~~~p~r~ig~HFfnP~~~m~LVEvi~g~~Ts~e~~~~~~~~~~~lgK~pV 490 (742)
T 3zwc_A 411 VFAELSALCKPGAFLCTNTSALNVDDIASSTDRPQLVIGTHFFSPAHVMRLLEVIPSRYSSPTTIATVMSLSKKIGKIGV 490 (742)
T ss_dssp HHHHHHHHSCTTCEEEECCSSSCHHHHHTTSSCGGGEEEEECCSSTTTCCEEEEEECSSCCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHhhcCCCCceEEecCCcCChHHHHhhcCCccccccccccCCCCCCceEEEecCCCCCHHHHHHHHHHHHHhCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCchhhhhhhhHHHHHHHHHHHcCCCHHHHHHHHHhcCCCccHHHHHHhhchHHHHHHHHHHHHhCCCC-------
Q 004972 482 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR------- 554 (721)
Q Consensus 482 ~v~d~~gfi~nRl~~~~~~Ea~~l~~~Gv~~~~ID~a~~~~G~p~Gpf~~~D~~Gld~~~~~~~~l~~~~~~~------- 554 (721)
+++|.||||+||++.++++|+++++++|+++++||.++.++|+|||||+++|++|||+.+++.+.+....++.
T Consensus 491 ~vkd~pGFi~NRi~~~~~~ea~~l~~eG~~~~~id~a~~~~G~pmGPf~l~D~vGlDv~~~v~~~~~~~~~~~~~~~~~~ 570 (742)
T 3zwc_A 491 VVGNCYGFVGNRMLAPYYNQGFFLLEEGSKPEDVDGVLEEFGFKMGPFRVSDLAGLDVGWKIRKGQGLTGPSLPPGTPVR 570 (742)
T ss_dssp ECCCSTTTTHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTCSSCHHHHHHHHCHHHHHHHHHHTTSSSTTSCTTCCTT
T ss_pred ccCCCCCccHHHHhhHHHHHHHHHHHcCCCHHHHHHHHHHcCCCCChHHHHHHhCHHHHHHHHHHHHhhCcccCccchhh
Confidence 9999999999999999999999999999999999999988999999999999999999999999876543321
Q ss_pred ----CCCcHHHHHHHHcCCCCcccCccccccCCCC--CCCCCCCchhHHHHHhhhccCCCCCCCcccChHHHHHHHHHHH
Q 004972 555 ----SFQSPLVDLLLKSGRNGKANGKGLYTYEKGS--KPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPV 628 (721)
Q Consensus 555 ----~~~~~~l~~~v~~G~~G~k~g~GfY~y~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~ 628 (721)
..+++++++|+++|++|+|||+|||+|++++ ...+|+++..++...+....+.+ ..++.++|.+|+++++
T Consensus 571 ~~~~~~~~~l~~~mv~~G~lG~KtG~GFY~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ei~~R~l~~~ 646 (742)
T 3zwc_A 571 KRGNSRYSPLGDMLCEAGRFGQKTGKGWYQYDKPLGRIHKPDPWLSTFLSQYREVHHIEQ----RTISKEEILERCLYSL 646 (742)
T ss_dssp EETTEECCCHHHHHHTTTCCBGGGTBSSSEESSTTCSCEECCHHHHHHHHHHHHHHTCCC----CCCCHHHHHHHHHHHH
T ss_pred hcccccccHHHHHHHHCCCccccCCCeeEECCCCCCccCCCChHHHHHHHHHhhhcCCCc----CCCCHHHHHHHHHHHH
Confidence 1156799999999999999999999997643 34677777777766555444333 3578899999999999
Q ss_pred HHHHHHHhhcCcCCChhHHHHHHHHccCCCCCCCcHhHHHHHhCHHHHHHHHHHHHHhhCC--CCCCCHHHHHHHHcCCC
Q 004972 629 VNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN--FFKPSRFLEERATKGIP 706 (721)
Q Consensus 629 ~~ea~~~l~~gv~~~~~~iD~~~~~g~g~~~~~~Gp~~~~d~~G~~~~~~~~~~~~~~~~~--~~~p~~~l~~~~~~g~~ 706 (721)
+|||++||+|||+.+++|||.+|++|+|||+|+||||+|+|.+|++.+++.|+++.+++|+ +|+|+++|++|+++|++
T Consensus 647 ~nEa~~~l~egI~~~~~diD~a~~~G~Gfp~~~GGp~~~~D~~G~~~~v~~l~~l~~~~g~~~~~~P~~~L~~ma~~G~~ 726 (742)
T 3zwc_A 647 INEAFRILEEGMAARPEHIDVIYLHGYGWPRHKGGPMFYAASVGLPTVLEKLQKYYRQNPDIPQLEPSDYLRRLVAQGSP 726 (742)
T ss_dssp HHHHHHHHHTTSSSCHHHHHHHHHHHSCCCGGGCCHHHHHHHHCHHHHHHHHHHHHHHCTTCGGGSCCHHHHHHHHTTCC
T ss_pred HHHHHHHhhcCcCCCHHHHHHHHHhCcCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCccCCCHHHHHHHHcCCC
Confidence 9999999999999999999999999999999999999999999999999999999999996 89999999999999974
Q ss_pred -CcCC
Q 004972 707 -LSAP 710 (721)
Q Consensus 707 -f~~~ 710 (721)
||+|
T Consensus 727 ~f~~~ 731 (742)
T 3zwc_A 727 PLKEW 731 (742)
T ss_dssp CGGGH
T ss_pred ccccc
Confidence 6777
No 2
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=100.00 E-value=2.1e-125 Score=1102.25 Aligned_cols=703 Identities=58% Similarity=0.954 Sum_probs=593.1
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCC-CCcCCCCchhhhhccCC--C
Q 004972 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGG-RFSGGFDINVFQKVHGA--G 77 (721)
Q Consensus 1 m~~~~v~~~~~~~~v~~i~l~~p~~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~-~F~aG~Dl~~~~~~~~~--~ 77 (721)
|+++.++++..+++|++||||||+.|+||.+|+++|.+++++++.|+++|+||||| |+ .||+|+|++++...... .
T Consensus 4 ~~~~~i~~~~~~~~va~itlnrp~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg-g~~~F~aG~Dl~~~~~~~~~~~~ 82 (725)
T 2wtb_A 4 RTKGKTVMEVGGDGVAVITLINPPVNSLSFDVLYNLKSNYEEALSRNDVKAIVITG-AKGRFSGGFDISGFGEMQKGNVK 82 (725)
T ss_dssp ---CEEEEEECTTSEEEEEEECTTTTCCCHHHHHHHHHHHHHHTTCTTCCEEEEEE-SSSCCBCSSCC------------
T ss_pred CcCCeEEEEEeeCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEEC-CCCcccCCcCHHHHhcccchhhh
Confidence 55677899833789999999999889999999999999999999999999999999 76 99999999998542211 0
Q ss_pred cccccchHHHHHHHHHHhhCCCcEEEEECCcccccchHhhhhcCEEEeeCCceEeCcccccCcccc---ccccccccCHH
Q 004972 78 DVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLS 154 (721)
Q Consensus 78 ~~~~~~~~~~~~~~~~l~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~a~~~~pe~~~Gl~P~---~~~l~r~~G~~ 154 (721)
....+....+.++ +.|.++||||||+|||+|+|||++|+|+||||||+++++|++||+++|++|+ +++|+|++|..
T Consensus 83 ~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~elalacD~ria~~~a~fglpev~lGl~P~~Ggt~~L~rlvG~~ 161 (725)
T 2wtb_A 83 EPKAGYISIDIIT-DLLEAARKPSVAAIDGLALGGGLELAMACHARISAPAAQLGLPELQLGVIPGFGGTQRLPRLVGLT 161 (725)
T ss_dssp CCSSSHHHHHCCC-CCCCTSSSCEEEEECSEEETHHHHHHHHSSEEEECTTCEEECCGGGGTCCCCSSHHHHHHHHHCHH
T ss_pred hHHHHHHHHHHHH-HHHHhCcCcEEEEECCccCcccHHHHHhCCEEEEcCCCEEeCchhccCCCCCccHHHHHHHhcCHH
Confidence 0112222333444 5588999999999999999999999999999999999999999999999997 89999999999
Q ss_pred HHHHHHHcCCCcCHHHHHHcCCccEEcCCchHHHHHHHHHHHHHhcC-ch--hhhhhhccCCCCCcHHHHHHHHHHHHHH
Q 004972 155 KAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARR-KP--WIRSLHRTDKLGSLSEAREVLKLARLQA 231 (721)
Q Consensus 155 ~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (721)
+|++|++||++++|+||+++||||+|||++++++++.++++++++.+ |+ ..+ . ..+.+........+..++...
T Consensus 162 ~A~~l~ltG~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~p~~~~~~--~-~~~~~~~~~~~~~~~~a~~~~ 238 (725)
T 2wtb_A 162 KALEMILTSKPVKAEEGHSLGLIDAVVPPAELVTTARRWALDIVGRRKPWVSSVS--K-TDKLPPLGEAREILTFAKAQT 238 (725)
T ss_dssp HHHHHHHHCCCEEHHHHHHHTSCSEECCTTTHHHHHHHHHHHHHTTSSCCCCGGG--C-CTTSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCHHHHHHCCccceEcChhHHHHHHHHHHHHHHhcCCChhhhhh--h-ccccCccchHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999998873 22 111 0 001112222333555566655
Q ss_pred H-HhCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcCCCCCCCCCCCCCCceeEEE
Q 004972 232 K-KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAV 310 (721)
Q Consensus 232 ~-~~~~~~~A~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~~~~~~~~~~~~~~~~kI~V 310 (721)
+ ++++ |||+..+|++++.+...+++++++.|.+.|..++.|+|+++++++|++||+++|.++....+..+++|+||+|
T Consensus 239 ~~~~~g-~pA~~~~k~~~~~~~~~~~~~~l~~E~~~~~~l~~s~~~~~~~~aF~~kr~~~~~~~~~~~~~~~~~~~kV~V 317 (725)
T 2wtb_A 239 LKRAPN-MKHPLMCLDAIEVGIVSGPRAGLEKEAEVASQVVKLDTTKGLIHVFFSQRGTAKVPGVTDRGLVPRKIKKVAI 317 (725)
T ss_dssp HHHCTT-CCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHGGGCCTTTSSSCCCCCCCCCEEE
T ss_pred HHhccC-CcHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhcchhHHHHHHHhhhhhhhcccCCCCccccccccCcEEEE
Confidence 4 4555 9999999999999999999999999999999999999999999999999999998863211334567899999
Q ss_pred EcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCccccCCCCEEEE
Q 004972 311 IGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIE 390 (721)
Q Consensus 311 IG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~aDlVIe 390 (721)
||+|.||++||..++++|++|++||++++.++++.+.+++.+++++++|.+++.+.+...++++.+++++.+++||+||+
T Consensus 318 IGaG~MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~~~~~~aDlVIe 397 (725)
T 2wtb_A 318 IGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGSLDYESFRDVDMVIE 397 (725)
T ss_dssp ECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEEESSSGGGTTCSEEEE
T ss_pred EcCCHhhHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEEeCCHHHHCCCCEEEE
Confidence 99999999999999999999999999999999998889999999999999888777888899999999988999999999
Q ss_pred cccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhcccCCCCcEEEecCCCCCCCCCeeEEecCCCCCHHHHHHHH
Q 004972 391 AVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLM 470 (721)
Q Consensus 391 avpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~~l~~~~~~~~r~ig~h~~~p~~~~~lvEiv~~~~t~~e~~~~~~ 470 (721)
||||+.++|+++++++.+++++++||+||||+++++++++.+.++++++|+|||+|++.++++|+++++.|++++++.+.
T Consensus 398 aVpe~~~vk~~v~~~l~~~~~~~~IlasntStl~i~~la~~~~~p~~~iG~hf~~P~~~~~lvevv~g~~t~~e~~~~~~ 477 (725)
T 2wtb_A 398 AVIENISLKQQIFADLEKYCPQHCILASNTSTIDLNKIGERTKSQDRIVGAHFFSPAHIMPLLEIVRTNHTSAQVIVDLL 477 (725)
T ss_dssp CCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHTTTCSCTTTEEEEEECSSTTTCCEEEEEECSSCCHHHHHHHH
T ss_pred cCcCCHHHHHHHHHHHHhhCCCCcEEEeCCCCCCHHHHHHHhcCCCCEEEecCCCCcccCceEEEEECCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999998889999999999999999999999999999999999999
Q ss_pred HHHHHcCCeeEEEcCCCchhhhhhhhHHHHHHHHHHHcCCCHHHHHHHHHhcCCCccHHHHHHhhchHHHHHHHHHHHHh
Q 004972 471 TVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKA 550 (721)
Q Consensus 471 ~l~~~lG~~~v~v~d~~gfi~nRl~~~~~~Ea~~l~~~Gv~~~~ID~a~~~~G~p~Gpf~~~D~~Gld~~~~~~~~l~~~ 550 (721)
++++.+|+.|++++|.|||++||++.++++|++.++++|+++++||+++.++|+|||||+++|++|||+.+++.+.+++.
T Consensus 478 ~l~~~lGk~~v~v~d~~Gfi~Nril~~~~~Ea~~l~~~G~~~e~id~~~~~~g~p~Gp~~l~D~vGld~~~~i~~~~~~~ 557 (725)
T 2wtb_A 478 DVGKKIKKTPVVVGNCTGFAVNRMFFPYTQAAMFLVECGADPYLIDRAISKFGMPMGPFRLCDLVGFGVAIATATQFIEN 557 (725)
T ss_dssp HHHHHTTCEEEEEESSTTTTHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTCSSCHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred HHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHcCCCCCHHHHHHHhchHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999998899999999999999999999999999998
Q ss_pred CCCC-CCCcHHHHHHHHcCCCCcccCccccccCCCCCCCCCCCchhHHHHHhhhccCCCCCCCcccChHHHHHHHHHHHH
Q 004972 551 FPDR-SFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVV 629 (721)
Q Consensus 551 ~~~~-~~~~~~l~~~v~~G~~G~k~g~GfY~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~ 629 (721)
++++ +.| +++++|+++|++|+|||+|||+|++.++..+|+++..++...+....+.+..+...+++++|.+|++++++
T Consensus 558 ~~~~~~~~-~~l~~~v~~g~lG~k~g~GfY~y~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~l~~~~ 636 (725)
T 2wtb_A 558 FSERTYKS-MIIPLMQEDKRAGEATRKGFYLYDDKRKAKPDPELKKYIEKARSISGVKLDPKLANLSEKDIIEMTFFPVV 636 (725)
T ss_dssp SGGGCCCC-THHHHHHTTC---------------------CCCCCTTSHHHHHHTCCSCCCTTTTCCHHHHHHHHHHHHH
T ss_pred cCCccCCh-HHHHHHHHCCCceecCCceeEeCCCCccCCCCHHHHHHHHhhhhhccccchhhcccCCHHHHHHHHHHHHH
Confidence 8876 446 99999999999999999999999632223478888777664432111101111123678999999999999
Q ss_pred HHHHHHhhcCcCCChhHHHHHHHHccCCCCCCCcHhHHHHHhCHHHHHHHHHHHHHhhCCCCCCCHHHHHHHHcCCCCcC
Q 004972 630 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSA 709 (721)
Q Consensus 630 ~ea~~~l~~gv~~~~~~iD~~~~~g~g~~~~~~Gp~~~~d~~G~~~~~~~~~~~~~~~~~~~~p~~~l~~~~~~g~~f~~ 709 (721)
||+++||+|||+.+++|||.+|++|+|||+|+||||+|+|.+|++.+++.++++++.+|++|+|+++|++|+++|++||.
T Consensus 637 nea~~~l~egi~~~~~diD~~~~~G~g~p~~~GGp~~~~d~~G~~~~~~~~~~~~~~~g~~~~p~~~l~~~~~~g~~f~~ 716 (725)
T 2wtb_A 637 NEACRVFAEGIAVKAADLDIAGIMGMGFPPYRGGIMFWADSIGSKYIYSRLDEWSKAYGEFFKPCAFLAERGSKGVLLSA 716 (725)
T ss_dssp HHHHHHHHTTSSSCHHHHHHHHHHHHCCCGGGCCHHHHHHHHCHHHHHHHHHHHHHHHCGGGCCCHHHHHHHHHTCCSSS
T ss_pred HHHHHHHhcCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHhCHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHcCCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred C
Q 004972 710 P 710 (721)
Q Consensus 710 ~ 710 (721)
.
T Consensus 717 ~ 717 (725)
T 2wtb_A 717 P 717 (725)
T ss_dssp C
T ss_pred h
Confidence 3
No 3
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=100.00 E-value=1.1e-124 Score=1095.85 Aligned_cols=692 Identities=30% Similarity=0.519 Sum_probs=613.6
Q ss_pred CCcEEEEEecCcEEEEEeCCC--CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCC-CCcCCCCchhhhhccCCC--
Q 004972 3 APRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGG-RFSGGFDINVFQKVHGAG-- 77 (721)
Q Consensus 3 ~~~v~~~~~~~~v~~i~l~~p--~~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~-~F~aG~Dl~~~~~~~~~~-- 77 (721)
.+.++++..+++|++|||||| +.|+||.+|+++|.+++++++.|+++|+||||| |+ .||+|+|++++.......
T Consensus 5 ~~~i~~~~~~~~va~itlnrp~~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg-g~~~F~aG~Dl~~~~~~~~~~~~ 83 (715)
T 1wdk_A 5 GKAITVTALESGIVELKFDLKGESVNKFNRLTLNELRQAVDAIKADASVKGVIVSS-GKDVFIVGADITEFVENFKLPDA 83 (715)
T ss_dssp CSSEEEEECGGGEEEEEECCTTSSSCBCCHHHHHHHHHHHHHHHHCTTCCEEEEEE-SSSSSBBCCCHHHHHHHTTSCHH
T ss_pred CCeEEEEEeeCCEEEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEEC-CCCeEeCCcCHHHHhhcccCCHH
Confidence 456888833789999999999 579999999999999999999999999999999 76 999999999986532111
Q ss_pred cccccchHHHHHHHHHHhhCCCcEEEEECCcccccchHhhhhcCEEEeeCCceEeCcccccCcccc---ccccccccCHH
Q 004972 78 DVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLS 154 (721)
Q Consensus 78 ~~~~~~~~~~~~~~~~l~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~a~~~~pe~~~Gl~P~---~~~l~r~~G~~ 154 (721)
....+....++++ ++|.++||||||+|||+|+|||++|+|+||||||+++++|++||+++|++|+ +++|+|++|..
T Consensus 84 ~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~elalacD~ria~~~a~fglpev~lGl~P~~ggt~~L~r~vG~~ 162 (715)
T 1wdk_A 84 ELIAGNLEANKIF-SDFEDLNVPTVAAINGIALGGGLEMCLAADFRVMADSAKIGLPEVKLGIYPGFGGTVRLPRLIGVD 162 (715)
T ss_dssp HHHHHHHHHHHHH-HHHHTCSSCEEEEECSCEETHHHHHHHTSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHHH-HHHHhCCCCEEEEECCEeeHHHHHHHHHCCEEEEeCCCEEeChhhccCCCCCccHHHHHHHHhCHH
Confidence 1111223345566 6799999999999999999999999999999999999999999999999997 89999999999
Q ss_pred HHHHHHHcCCCcCHHHHHHcCCccEEcCCchHHHHHHHHHHHHHhcCchhhhhhhccC--CCC-CcHHHHH-HHHHHHH-
Q 004972 155 KAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTD--KLG-SLSEARE-VLKLARL- 229 (721)
Q Consensus 155 ~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~--~~~-~~~~~~~-~~~~~~~- 229 (721)
+|++|++||++++|+||+++||||+|||+++++++|.++++++++...++.... +.. ... + ..... .+..+++
T Consensus 163 ~A~~l~ltG~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~-~~~~~p~~~~-~~~~~~~~~~~k~~ 240 (715)
T 1wdk_A 163 NAVEWIASGKENRAEDALKVSAVDAVVTADKLGAAALDLIKRAISGELDYKAKR-QPKLEKLKLN-AIEQMMAFETAKGF 240 (715)
T ss_dssp HHHHHHHHCCCEEHHHHHHTTSSSEEECGGGHHHHHHHHHHHHHTTSSCHHHHH-GGGGSCCSCC-HHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCHHHHHHCCCceEEeChHHHHHHHHHHHHHHhhccCCcchhc-ccccCccccC-chhHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999988621111110 000 000 0 01111 2333444
Q ss_pred HHHHhCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcCCCCCCCCCCCCCCceeEE
Q 004972 230 QAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 309 (721)
Q Consensus 230 ~~~~~~~~~~A~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~~~~~~~~~~~~~~~~kI~ 309 (721)
..|+++++|||+..+|++++.+...+++++++.|.+.|..++.|+|+++++++|++||+++|.++.+. + .+++++||+
T Consensus 241 ~~~~~~g~~~A~~~~k~~v~~~~~~~~~~~l~~E~~~~~~l~~s~~~~~~~~aF~~kr~~~~~~~~~~-~-~~~~i~kV~ 318 (715)
T 1wdk_A 241 VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFAKLAKTSASNCLIGLFLNDQELKKKAKVYD-K-IAKDVKQAA 318 (715)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHH-T-TCCCCSSEE
T ss_pred HHHhcccCCchHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcchhHHHHHHHHHhhhhhhccccCCC-C-ccccCCEEE
Confidence 35689999999999999999999999999999999999999999999999999999999998765322 2 346789999
Q ss_pred EEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCccccCCCCEEE
Q 004972 310 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVI 389 (721)
Q Consensus 310 VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~aDlVI 389 (721)
|||+|+||++||..++++|++|++||++++.++.+...+++.++.++++|.+++.+.+...++++.+++++.+++||+||
T Consensus 319 VIGaG~MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~~~~~~aDlVI 398 (715)
T 1wdk_A 319 VLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSYGDFGNVDLVV 398 (715)
T ss_dssp EECCHHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEEESSSTTGGGCSEEE
T ss_pred EECCChhhHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcCeEEECCHHHHCCCCEEE
Confidence 99999999999999999999999999999999998888999999999999999888888888899999998899999999
Q ss_pred EcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhcccCCCCcEEEecCCCCCCCCCeeEEecCCCCCHHHHHHH
Q 004972 390 EAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDL 469 (721)
Q Consensus 390 eavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~~l~~~~~~~~r~ig~h~~~p~~~~~lvEiv~~~~t~~e~~~~~ 469 (721)
+||||+.++|+++++++.+++++++||+||||+++++++++.+.++++++|+|||+|++.++++|+++++.|++++++.+
T Consensus 399 eaV~e~~~vk~~v~~~l~~~~~~~~IlasntStl~i~~la~~~~~~~~~ig~hf~~P~~~~~lvevv~g~~t~~e~~~~~ 478 (715)
T 1wdk_A 399 EAVVENPKVKQAVLAEVENHVREDAILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSDLAVATT 478 (715)
T ss_dssp ECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSSSCHHHHGGGCSCGGGEEEEECCSSTTTCCEEEEEECSSCCHHHHHHH
T ss_pred EcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCCCCHHHHHHHhcCccceEEEEccCCcccCceEEEEECCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999998899999999999999999999999999999999999
Q ss_pred HHHHHHcCCeeEEEcCCCchhhhhhhhHHHHHHHHHHHcCCCHHHHHHHHHhcCCCccHHHHHHhhchHHHHHHHHHHHH
Q 004972 470 MTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDK 549 (721)
Q Consensus 470 ~~l~~~lG~~~v~v~d~~gfi~nRl~~~~~~Ea~~l~~~Gv~~~~ID~a~~~~G~p~Gpf~~~D~~Gld~~~~~~~~l~~ 549 (721)
.++++.+|+.|++++|.|||++||++.++++|++.++++|+++++||.++.++|+|||||+++|++|||+.+++.+.+++
T Consensus 479 ~~l~~~lGk~~v~v~d~~Gfi~Nril~~~~~Ea~~l~~~G~~~~~id~~~~~~G~p~Gp~~l~D~vGld~~~~i~~~~~~ 558 (715)
T 1wdk_A 479 VAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAE 558 (715)
T ss_dssp HHHHHHTTCEEEEEESCTTTTHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTCSSCHHHHHHHHCHHHHHHHHHHHHH
T ss_pred HHHHHHhCCEeEEEcCCCChhhhHHHHHHHHHHHHHHHCCCCHHHHHHHHHHcCCCCCHHHHHHHhhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999889999999999999999999999999998
Q ss_pred hCCCCCCCc--HHHHHHHHcCCCCcccCccccccC-C--CC-CCCCCCCchhHHHHHhhhccCCCCCCCcccChHHHHHH
Q 004972 550 AFPDRSFQS--PLVDLLLKSGRNGKANGKGLYTYE-K--GS-KPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEM 623 (721)
Q Consensus 550 ~~~~~~~~~--~~l~~~v~~G~~G~k~g~GfY~y~-~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r 623 (721)
.+++++.|+ +++++|+++|++|+|||+|||+|+ + ++ +..+|+++..++...+. + ...+++++|.+|
T Consensus 559 ~~~~~~~~~~~~~l~~~v~~g~lG~k~g~GfY~y~~~~~g~~~~~~~~~~~~~~~~~~~-----~---~~~~~~~~i~~r 630 (715)
T 1wdk_A 559 GFPDRMKDDRRSAIDALYEAKRLGQKNGKGFYAYEADKKGKQKKLVDSSVLEVLKPIVY-----E---QRDVTDEDIINW 630 (715)
T ss_dssp HCHHHHCCSSCCHHHHHHHTTCCBTTTTBSSSEEC-------CEECCTHHHHHHGGGCC-----C---CCCCCHHHHHHH
T ss_pred hcCCccCCChHHHHHHHHhCchhhhcCCcEEEecccCcCCCCcCCCCHHHHHHHhhhcc-----C---ccCCCHHHHHHH
Confidence 887766677 899999999999999999999996 3 22 34567777666543211 1 123678999999
Q ss_pred HHHHHHHHHHHHhhcCcCCChhHHHHHHHHccCCCCCCCcHhHHHHHhCHHHHHHHHHHHHHhhCCCCCCCHHHHHHHHc
Q 004972 624 ILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATK 703 (721)
Q Consensus 624 ~~~~~~~ea~~~l~~gv~~~~~~iD~~~~~g~g~~~~~~Gp~~~~d~~G~~~~~~~~~~~~~~~~~~~~p~~~l~~~~~~ 703 (721)
++++++||+++||+|||+.+++|||.+|++|+|||+|+||||+|+|.+|++.+++.++++ +.+|++|+|+++|++|+++
T Consensus 631 ~l~~~~nea~~~l~egi~~~~~diD~~~~~G~g~p~~~GGp~~~~d~~G~~~~~~~~~~~-~~~g~~~~p~~~l~~~~~~ 709 (715)
T 1wdk_A 631 MMIPLCLETVRCLEDGIVETAAEADMGLVYGIGFPLFRGGALRYIDSIGVAEFVALADQY-AELGALYHPTAKLREMAKN 709 (715)
T ss_dssp HHHHHHHHHHHHHHHTSSSSHHHHHHHHHHHTCCCGGGCCHHHHHHHHCHHHHHHHHHHT-GGGCGGGCCCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhcCCcCCHHHHHHHHHhCCCCCCCCCCHHHHHHHhCHHHHHHHHHHH-HhcCCCCCCCHHHHHHHHc
Confidence 999999999999999999999999999999999999999999999999999999999999 8899999999999999999
Q ss_pred CCCCcC
Q 004972 704 GIPLSA 709 (721)
Q Consensus 704 g~~f~~ 709 (721)
|++||.
T Consensus 710 g~~f~~ 715 (715)
T 1wdk_A 710 GQSFFG 715 (715)
T ss_dssp TCCSCC
T ss_pred CCCCCC
Confidence 999984
No 4
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=100.00 E-value=2.3e-80 Score=679.18 Aligned_cols=414 Identities=28% Similarity=0.471 Sum_probs=365.0
Q ss_pred HHHHhhhhcCCCCCCC---C-CCCCCCceeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhh
Q 004972 282 VFFAQRATSKVPNVTD---I-GLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 357 (721)
Q Consensus 282 aF~~~r~~~~~~~~~~---~-~~~~~~~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~ 357 (721)
+|.++|..+++..... + ...+++++||+|||+|+||++||..++++|++|++||++++ ++...+++.++.+++
T Consensus 27 ~~~a~~~~~~w~~p~~~~~~~~~~~~~i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e---~a~~~i~~~l~~~~~ 103 (460)
T 3k6j_A 27 LMEAHSLAGQWSLPNDRGDHTNSEAYDVNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ---RCKQELEVMYAREKS 103 (460)
T ss_dssp HHHTTCCTTSCBCSTTSCBTTSCCCCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH---HHHHHHHHHHHHHHH
T ss_pred HHhHHHhhccccCCCCccccccCCcccCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH---HHHHHHHHHHHHHHH
Confidence 3446666655533211 1 23456789999999999999999999999999999999998 456678888899999
Q ss_pred cCCCCHHHHHHhhcCceeccCccccCCCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhcccCCCCc
Q 004972 358 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDR 437 (721)
Q Consensus 358 ~g~~~~~~~~~~~~~i~~~~~~~~l~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~~l~~~~~~~~r 437 (721)
+|.++.++.+..+++++++++++++++||+|||||||++++|+++++++.+++++++||+||||+++++++++.+.+|++
T Consensus 104 ~G~l~~~~~~~~~~~i~~t~dl~al~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~aIlasnTSsl~i~~ia~~~~~p~r 183 (460)
T 3k6j_A 104 FKRLNDKRIEKINANLKITSDFHKLSNCDLIVESVIEDMKLKKELFANLENICKSTCIFGTNTSSLDLNEISSVLRDPSN 183 (460)
T ss_dssp TTSCCHHHHHHHHTTEEEESCGGGCTTCSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSSSCHHHHHTTSSSGGG
T ss_pred cCCCCHHHHHHHhcceEEeCCHHHHccCCEEEEcCCCCHHHHHHHHHHHHhhCCCCCEEEecCCChhHHHHHHhccCCcc
Confidence 99999998889999999999998899999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCCCCCeeEEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCchhhhhhhhHHHHHHHHHH-HcCCCHHHHH
Q 004972 438 IIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLV-SLGVDVFRID 516 (721)
Q Consensus 438 ~ig~h~~~p~~~~~lvEiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~~gfi~nRl~~~~~~Ea~~l~-~~Gv~~~~ID 516 (721)
|+|+|||+|++.++++||+++..|++++++.+.++++.+||+|++++|.|||++||++.++++||+.++ ++|++|++||
T Consensus 184 ~iG~HffnPv~~m~LvEIv~g~~Ts~e~~~~~~~l~~~lGk~~v~v~d~pGfi~Nril~~~~~EA~~l~~~~Ga~~e~ID 263 (460)
T 3k6j_A 184 LVGIHFFNPANVIRLVEIIYGSHTSSQAIATAFQACESIKKLPVLVGNCKSFVFNRLLHVYFDQSQKLMYEYGYLPHQID 263 (460)
T ss_dssp EEEEECCSSTTTCCEEEEECCSSCCHHHHHHHHHHHHHTTCEEEEESSCCHHHHHHHHHHHHHHHHHHHHTSCCCHHHHH
T ss_pred eEEEEecchhhhCCEEEEEeCCCCCHHHHHHHHHHHHHhCCEEEEEecccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999 6699999999
Q ss_pred HHHHhcCCCccHHHHHHhhchHHHHHHHHHHHHhCCCCCCCcHHHHHHHHcCCCCcccCccccccCCCCC-CCCCCCchh
Q 004972 517 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLP 595 (721)
Q Consensus 517 ~a~~~~G~p~Gpf~~~D~~Gld~~~~~~~~l~~~~~~~~~~~~~l~~~v~~G~~G~k~g~GfY~y~~~~~-~~~~~~~~~ 595 (721)
++++++|+|||||+++|++|||+.+++.+.+ . ..+++++++||++|++|+|||+|||+|+++++ +.+++++..
T Consensus 264 ~a~~~~G~pmGPf~l~D~vGlD~~~~i~~~~----~--~~~~~~l~~~v~~G~lG~KtG~GFY~y~~~~~~~~~~~~~~~ 337 (460)
T 3k6j_A 264 KIITNFGFLMGPMTVADMNGFDVMEKLKKEN----G--LEPNPIEKEMWRLKRYGRKTNKGFYKYDDKTQRKENDTEMEQ 337 (460)
T ss_dssp HHHHHHTBSSCHHHHHHHHCTHHHHHHHHHS----C--CCCCHHHHHHHHTTCCBGGGTBSSSEECTTTCCEECCHHHHH
T ss_pred HHHHHcCCCcCHHHHHHHhchHHHHHHHHHh----c--cCchHHHHHHHHCCCCeeecCCEEEECCCCCCCCCCCHHHHH
Confidence 9998899999999999999999999998776 1 23569999999999999999999999987543 456777766
Q ss_pred HHHHHhhhccCCCCCCCcccChHHHHHHHHHHHHHHHHHHhhcCcCCChhHHHHHHHHccCCCCCCCcHhHHHHHhCHHH
Q 004972 596 IIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANY 675 (721)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~ea~~~l~~gv~~~~~~iD~~~~~g~g~~~~~~Gp~~~~d~~G~~~ 675 (721)
++...+...++. ...+++++|.+|++++++||+++||+|||+.+++|||.+|++|+|||+|+||||+|+|.+|++.
T Consensus 338 ~~~~~~~~~~~~----~~~~~~~~i~~r~l~~~~nea~~~l~egi~~~~~diD~~~~~G~GfP~~~GGp~~~~d~~G~~~ 413 (460)
T 3k6j_A 338 IIRRVSQNAKSN----IQIINDQDVINFMLYPTVNEGYRCIEEGVISNESLIDIMFILGFGWPIHSGGPMRFGKTEGLDK 413 (460)
T ss_dssp HHHHC---CCCS----SCCCSHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHTCCCSEETTEECBCSSCBSSHH
T ss_pred HHHHHHHhcCCC----cccCChHHHHHHHHHHHHHHHHHHHhcCCCCcchhhhHHHHhcCCCCccccCHHHHHHHhCHHH
Confidence 665433222222 2357889999999999999999999999998999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhCCC--CCCCHHHHHHHHcCCCCc
Q 004972 676 VYTSLKKWSQLYGNF--FKPSRFLEERATKGIPLS 708 (721)
Q Consensus 676 ~~~~~~~~~~~~~~~--~~p~~~l~~~~~~g~~f~ 708 (721)
+++.++.|++.+|++ |+|+++|++|+++|+.|-
T Consensus 414 ~~~~l~~l~~~~g~~~~~~p~~~L~~~a~~g~~~~ 448 (460)
T 3k6j_A 414 IANMLVHWSSLEPKESAYIVADALKTANVSTGSSG 448 (460)
T ss_dssp HHHHHHHHHHHCTTCGGGSCCHHHHHHC-------
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHcCCCcc
Confidence 999999999999997 999999999999888764
No 5
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=100.00 E-value=2.9e-75 Score=649.87 Aligned_cols=433 Identities=33% Similarity=0.533 Sum_probs=373.9
Q ss_pred CCHHHHHHHHHHHHhhhhcCCCCC---CCCCCCCCCceeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHH
Q 004972 272 MLDTSRGLVHVFFAQRATSKVPNV---TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTI 348 (721)
Q Consensus 272 ~s~~~~~~i~aF~~~r~~~~~~~~---~~~~~~~~~~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~ 348 (721)
.|++++++++.|+.+|..+|.++. ...+..+++++||+|||+|.||++||..++++|++|++||++++.++.+.+.+
T Consensus 1 ~~~~~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~~~~~~~~~i 80 (463)
T 1zcj_A 1 ASGQAKALQYAFFAEKSANKWSTPSGASWKTASAQPVSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKII 80 (463)
T ss_dssp -CHHHHHHHHHHHGGGGGGSCBCTTCCBTTTCCCCCCCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhcCCCCccCCCccccccCCCCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHH
Confidence 489999999999999999985531 11123456789999999999999999999999999999999999999988888
Q ss_pred HHHHHhhhhcCCCCHHHHHHhhcCceeccCccccCCCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHH
Q 004972 349 EANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428 (721)
Q Consensus 349 ~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~~l 428 (721)
++.++..+++|.+++.+.+.. ....+++++.+++||+||+|||++.++|+++++++.+++++++||+||||+++++++
T Consensus 81 ~~~l~~~~~~g~~~~~~~~~~--~~~i~~~~~~~~~aDlVIeaVpe~~~~k~~v~~~l~~~~~~~~ii~snTs~~~~~~l 158 (463)
T 1zcj_A 81 TFTLEKEASRAHQNGQASAKP--KLRFSSSTKELSTVDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSALNVDDI 158 (463)
T ss_dssp HHHHHHHHHHHHHTTCCCCCC--CEEEESCGGGGTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHH
T ss_pred HHHHHHHHHcCCCCHHHHHHH--HhhhcCCHHHHCCCCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCCcCHHHH
Confidence 777777666554332111111 123466778889999999999999999999999999999999999999999999999
Q ss_pred hcccCCCCcEEEecCCCCCCCCCeeEEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCchhhhhhhhHHHHHHHHHHHc
Q 004972 429 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSL 508 (721)
Q Consensus 429 ~~~~~~~~r~ig~h~~~p~~~~~lvEiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~~gfi~nRl~~~~~~Ea~~l~~~ 508 (721)
++.+.++++++|+|||+|++.++++|+++++.|++++++.+.++++.+|++++++++.+||++||++.++++|+++++++
T Consensus 159 a~~~~~~~~~ig~hf~~P~~~~~lvevv~g~~t~~e~~~~~~~l~~~lGk~~v~v~~~~gfi~Nrll~~~~~ea~~l~~~ 238 (463)
T 1zcj_A 159 ASSTDRPQLVIGTHFFSPAHVMRLLEVIPSRYSSPTTIATVMSLSKKIGKIGVVVGNCYGFVGNRMLAPYYNQGFFLLEE 238 (463)
T ss_dssp HTTSSCGGGEEEEEECSSTTTCCEEEEEECSSCCHHHHHHHHHHHHHTTCEEEEBCCSTTTTHHHHHHHHHHHHHHHHHT
T ss_pred HHHhcCCcceEEeecCCCcccceeEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHHHHc
Confidence 99888899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCCCccHHHHHHhhchHHHHHHHHHHH---HhCC-------CCC-CCcHHHHHHHHcCCCCcccCcc
Q 004972 509 GVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD---KAFP-------DRS-FQSPLVDLLLKSGRNGKANGKG 577 (721)
Q Consensus 509 Gv~~~~ID~a~~~~G~p~Gpf~~~D~~Gld~~~~~~~~l~---~~~~-------~~~-~~~~~l~~~v~~G~~G~k~g~G 577 (721)
|+++++||.+++++|+|+|||+++|.+|||+.+++++.+. +.++ +.. .+++++++||++|++|+|||+|
T Consensus 239 G~~~~~id~~~~~~g~p~Gp~~l~D~~GlD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~g~lG~k~g~G 318 (463)
T 1zcj_A 239 GSKPEDVDGVLEEFGFKMGPFRVSDLAGLDVGWKIRKGQGLTGPSLPPGTPVRKRGNSRYSPLGDMLCEAGRFGQKTGKG 318 (463)
T ss_dssp TCCHHHHHHHHHHHTCSSCHHHHHHHHCHHHHHHHHHHTTSSSSCCCTTCCTTEETTEECCTHHHHHHHTTCCBGGGTBS
T ss_pred CCCHHHHHHHHHHcCCCCcHHHHHHHcchHHHHHHHHHHhhhcccccccccccccccccchHHHHHHHHCCCCeeecCCe
Confidence 9999999999999999999999999999999999998872 2211 111 1368999999999999999999
Q ss_pred ccccCCCCC--CCCCCCchhHHHHHhhhccCCCCCCCcccChHHHHHHHHHHHHHHHHHHhhcCcCCChhHHHHHHHHcc
Q 004972 578 LYTYEKGSK--PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGM 655 (721)
Q Consensus 578 fY~y~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~ea~~~l~~gv~~~~~~iD~~~~~g~ 655 (721)
||+|+++++ ...++++..++.......++.+ ..+++++|+||++++++|||++|++|||+.+++|||.+|++|+
T Consensus 319 fy~y~~~g~~~~~~~~~~~~~~~~~~~~~g~~~----~~~~~g~i~~Rll~~~~nEa~~~l~eGIa~~~~dID~a~~~G~ 394 (463)
T 1zcj_A 319 WYQYDKPLGRIHKPDPWLSTFLSQYREVHHIEQ----RTISKEEILERCLYSLINEAFRILEEGMAARPEHIDVIYLHGY 394 (463)
T ss_dssp SEEESSTTCSCEEECHHHHHHHHHHHHHTTCCC----CCCCHHHHHHHHHHHHHHHHHHHHHTTSBSCHHHHHHHHHHHS
T ss_pred eccCCCCCCCCCCCCHHHHHHHHHHHHHcCCCc----ccCCHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhCC
Confidence 999964222 2356666666654433222222 2367899999999999999999999999988999999999999
Q ss_pred CCCCCCCcHhHHHHHhCHHHHHHHHHHHHHhhCC--CCCCCHHHHHHHHcCCCCc-CC
Q 004972 656 SFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN--FFKPSRFLEERATKGIPLS-AP 710 (721)
Q Consensus 656 g~~~~~~Gp~~~~d~~G~~~~~~~~~~~~~~~~~--~~~p~~~l~~~~~~g~~f~-~~ 710 (721)
|||+|+||||+++|.+|++.++++++.|++.+|+ +|+|+++|++|+++|++|. .|
T Consensus 395 G~p~~~gGP~~~~D~~Gl~~~~~~~~~l~~~~g~~~~~~p~~lL~~~v~~G~~~~~~~ 452 (463)
T 1zcj_A 395 GWPRHKGGPMFYAASVGLPTVLEKLQKYYRQNPDIPQLEPSDYLRRLVAQGSPPLKEW 452 (463)
T ss_dssp CCCGGGCCHHHHHHHHCHHHHHHHHHHHHHHCTTCGGGSCCHHHHHHHHTTCCCGGGH
T ss_pred CCCCCCcChHHHHHHhCHHHHHHHHHHHHHHhCCCccCCCCHHHHHHHHcCCCcccch
Confidence 9999999999999999999999999999999998 8999999999999999996 45
No 6
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=100.00 E-value=1.8e-74 Score=642.93 Aligned_cols=404 Identities=31% Similarity=0.491 Sum_probs=357.2
Q ss_pred CCceeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCcccc
Q 004972 303 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF 382 (721)
Q Consensus 303 ~~~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l 382 (721)
++++||+|||+|+||++||..++++|++|++||++++.++++.+.+++.+++++++|.++..+.+..+++++++++++.+
T Consensus 3 m~~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~ 82 (483)
T 3mog_A 3 LNVQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPVTDIHAL 82 (483)
T ss_dssp -CCCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEECCGGGG
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEeCCHHHh
Confidence 45789999999999999999999999999999999999999999999999999999999999888999999999999889
Q ss_pred CCCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhcccCCCCcEEEecCCCCCCCCCeeEEecCCCCC
Q 004972 383 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTS 462 (721)
Q Consensus 383 ~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~~l~~~~~~~~r~ig~h~~~p~~~~~lvEiv~~~~t~ 462 (721)
++||+||+||||+.++|+++++++.+++++++||+||||+++++++++.+.++++++|+|||+|++.++++|++++..|+
T Consensus 83 ~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~~IlasntSti~i~~ia~~~~~p~~~ig~hf~~Pa~v~~Lvevv~g~~Ts 162 (483)
T 3mog_A 83 AAADLVIEAASERLEVKKALFAQLAEVCPPQTLLTTNTSSISITAIAAEIKNPERVAGLHFFNPAPVMKLVEVVSGLATA 162 (483)
T ss_dssp GGCSEEEECCCCCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHTTTSSSGGGEEEEEECSSTTTCCEEEEEECSSCC
T ss_pred cCCCEEEEcCCCcHHHHHHHHHHHHHhhccCcEEEecCCCCCHHHHHHHccCccceEEeeecChhhhCCeEEEecCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCeeEEEcCCCchhhhhhhhHHHHHHHHHHHcCC-CHHHHHHHH-HhcCCCccHHHHHHhhchHHH
Q 004972 463 AQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGV-DVFRIDSAI-RSFGLPIGPFQLLDLAGYGVA 540 (721)
Q Consensus 463 ~e~~~~~~~l~~~lG~~~v~v~d~~gfi~nRl~~~~~~Ea~~l~~~Gv-~~~~ID~a~-~~~G~p~Gpf~~~D~~Gld~~ 540 (721)
+++++.+.++++.+|+.+++++|.|||++||++.++++|++.++++|. |+++||+++ .++|||||||+++|++|||+.
T Consensus 163 ~e~~~~~~~l~~~lGk~~v~v~d~~Gfi~Nr~l~~~~~Ea~~l~~~g~~~~~~id~a~~~~~G~p~GP~~l~D~~Gld~~ 242 (483)
T 3mog_A 163 AEVVEQLCELTLSWGKQPVRCHSTPGFIVNRVARPYYSEAWRALEEQVAAPEVIDAALRDGAGFPMGPLELTDLIGQDVN 242 (483)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEESCTTTTHHHHTHHHHHHHHHHHHTTCSCHHHHHHHHHHTTCCSSCHHHHHHHHCHHHH
T ss_pred HHHHHHHHHHHHHhCCEEEEEeccCcchHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhcCCCCCCHHHHHHHhchHHH
Confidence 999999999999999999999999999999999999999999999976 899999999 689999999999999999999
Q ss_pred HHHHHHHHHhC-CCCC-CCcHHHHHHHHcCCCCcccCccccccCCCCCCCC-----CCCchhHHHHH-------------
Q 004972 541 AATSKEFDKAF-PDRS-FQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKP-----DPSVLPIIEEC------------- 600 (721)
Q Consensus 541 ~~~~~~l~~~~-~~~~-~~~~~l~~~v~~G~~G~k~g~GfY~y~~~~~~~~-----~~~~~~~~~~~------------- 600 (721)
+++++.+++.+ +++. .|++++++|+++|++|+|||+|||+|+++++... ++....++...
T Consensus 243 ~~v~~~~~~~~~~~~~~~~~~~~~~~v~~g~lG~k~g~GfY~y~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 322 (483)
T 3mog_A 243 FAVTCSVFNAFWQERRFLPSLVQQELVIGGRLGKKSGLGVYDWRAEREAVVGLEAVSDSFSPMKVEKKSDGVTEIDDVLL 322 (483)
T ss_dssp HHHHHHHHHHTTSCGGGCCCHHHHHHHHTTCCBGGGTBSSSBTTSCCCCCCCCCCCCGGGCCSCEEECSTTEEEETTEEE
T ss_pred HHHHHHHHHHhcCCCccCchHHHHHHHHCCCCceeCCCEeEECCCCCCCcccccCCCchhHHHHHHHHhcccccccchhh
Confidence 99999998876 3433 4789999999999999999999999976422111 11110000000
Q ss_pred --------------hh----hccC--------C------------------CCCC-Cc--ccChHHHHHHHHHHHHHHHH
Q 004972 601 --------------RR----LSNI--------M------------------PGGK-PI--SVTEKEIVEMILFPVVNESC 633 (721)
Q Consensus 601 --------------~~----~~~~--------~------------------~~~~-~~--~~~~~~i~~r~~~~~~~ea~ 633 (721)
.. ..++ . ..++ +. .-++++|+||++++++|||+
T Consensus 323 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~vev~~~~~t~~~~~~~~~~~~~~~gk~~~~~~d~~g~i~~Rll~~~~nEA~ 402 (483)
T 3mog_A 323 IETQGETAQALAIRLARPVVVIDKMAGKVVTIAAAAVNPDSATRKAIYYLQQQGKTVLQIADYPGMLIWRTVAMIINEAL 402 (483)
T ss_dssp EECSSSCHHHHHHHHTSCEEEEECCSSSEEEEEECTTSCHHHHHHHHHHHHTTTCEEEECCCCTTTTHHHHHHHHHHHHH
T ss_pred cccCCcchHHHhhccccceeeeeccccceEEEecCCCCCHHHHHHHHHHHHHcCCceeeecccccHHHHHHHHHHHHHHH
Confidence 00 0000 0 0001 01 12578999999999999999
Q ss_pred HHhhcCcCCChhHHHHHHHHccCCCCCCCcHhHHHHHhCHHHHHHHHHHHHHhhCC-CCCCCHHHHHHHHcCCCCcCC
Q 004972 634 RVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN-FFKPSRFLEERATKGIPLSAP 710 (721)
Q Consensus 634 ~~l~~gv~~~~~~iD~~~~~g~g~~~~~~Gp~~~~d~~G~~~~~~~~~~~~~~~~~-~~~p~~~l~~~~~~g~~f~~~ 710 (721)
+|++|||+ |++|||.+|++|+|||+ |||+|+|.+|+|.++++++.|++.+|+ +|+|+++|++|+++|+.||+-
T Consensus 403 ~~l~eGva-s~~diD~a~~~G~G~P~---GPl~~~D~~Gld~~~~~~~~l~~~~g~~~~~p~~lL~~~v~~G~~~~~~ 476 (483)
T 3mog_A 403 DALQKGVA-SEQDIDTAMRLGVNYPY---GPLAWGAQLGWQRILRLLENLQHHYGEERYRPCSLLRQRALLESGYESE 476 (483)
T ss_dssp HHHHTTSS-CHHHHHHHHHHHSCCSS---CHHHHHHHHCHHHHHHHHHHHHHHHCCGGGCCCHHHHHHHHHHTCC---
T ss_pred HHHHcCCC-CHHHHHHHHHhCCCCCC---CHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHcCCCCCCC
Confidence 99999998 99999999999999999 999999999999999999999999986 999999999999999999975
No 7
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=100.00 E-value=4.7e-53 Score=443.11 Aligned_cols=268 Identities=21% Similarity=0.332 Sum_probs=238.4
Q ss_pred CceeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHH-HHHHhhcCceeccCc-cc
Q 004972 304 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD-KANNALKMLKGVLDY-SE 381 (721)
Q Consensus 304 ~~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~i~~~~~~-~~ 381 (721)
.++||+|||+|+||++||..++.+|++|+++|++++.++++.+++++.+..++++|.++.. ..+..+++|+.++++ ++
T Consensus 5 ~~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~~~l~~a 84 (319)
T 3ado_A 5 AAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEA 84 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHH
T ss_pred CCCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccccchHhH
Confidence 4679999999999999999999999999999999999999999999999999999988643 456677899999998 57
Q ss_pred cCCCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhcccCCCCcEEEecCCCCCCCCCeeEEecCCCC
Q 004972 382 FKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERT 461 (721)
Q Consensus 382 l~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~~l~~~~~~~~r~ig~h~~~p~~~~~lvEiv~~~~t 461 (721)
+++||+|||||||++++|+++|++|++++++++||+||||+++++++++.+.+|+||+|+|||||++.+|+||||+++.|
T Consensus 85 ~~~ad~ViEav~E~l~iK~~lf~~l~~~~~~~aIlaSNTSsl~is~ia~~~~~p~r~ig~HffNP~~~m~LVEiv~g~~T 164 (319)
T 3ado_A 85 VEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCLLPSKLFTGLAHVKQCIVAHPVNPPYYIPLVELVPHPET 164 (319)
T ss_dssp TTTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSSCCHHHHHTTCTTGGGEEEEEECSSTTTCCEEEEEECTTC
T ss_pred hccCcEEeeccccHHHHHHHHHHHHHHHhhhcceeehhhhhccchhhhhhccCCCcEEEecCCCCccccchHHhcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCeeEEE-cCCCchhhhhhhhHHHHHHHHHHHcCC-CHHHHHHHH-HhcCCC---ccHHHHHHhh
Q 004972 462 SAQVILDLMTVGKIIKKVPVVV-GNCTGFAVNRAFFPYSQSARLLVSLGV-DVFRIDSAI-RSFGLP---IGPFQLLDLA 535 (721)
Q Consensus 462 ~~e~~~~~~~l~~~lG~~~v~v-~d~~gfi~nRl~~~~~~Ea~~l~~~Gv-~~~~ID~a~-~~~G~p---~Gpf~~~D~~ 535 (721)
++++++++..|++.+|++|+++ +|.||||+||++.++++||++++++|+ +++|||.++ .++|+| ||||+++|++
T Consensus 165 s~~~~~~~~~~~~~~gk~pv~v~kd~pGFi~NRl~~~~~~EA~~lv~eGvas~edID~~~~~g~g~~~a~mGPf~~~Dl~ 244 (319)
T 3ado_A 165 SPATVDRTHALMRKIGQSPVRVLKEIDGFVLNRLQYAIISEAWRLVEEGIVSPSDLDLVMSDGLGMRYAFIGPLETMHLN 244 (319)
T ss_dssp CHHHHHHHHHHHHHTTCEEEECSSCCTTTTHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHTTHHHHHTTSCHHHHHHHT
T ss_pred cHHHHHHHHHHHHHhCCccCCcCCCCCCEeHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhCCCCCCCCcchhhhhhhc
Confidence 9999999999999999999866 899999999999999999999999987 999999999 789887 8999999999
Q ss_pred chHHHHHHHHHHHHhCCCCCCCcHHHHHH-HHcCCCCcccCccccccC
Q 004972 536 GYGVAAATSKEFDKAFPDRSFQSPLVDLL-LKSGRNGKANGKGLYTYE 582 (721)
Q Consensus 536 Gld~~~~~~~~l~~~~~~~~~~~~~l~~~-v~~G~~G~k~g~GfY~y~ 582 (721)
|+|+...+- .+. +.++.+ -+.|+.+.++|+++|+|.
T Consensus 245 G~~~~~~~~-~~~----------~~~~~~~~~~~~~p~~~~~~~~k~~ 281 (319)
T 3ado_A 245 AEGMLSYCD-RYS----------EGMKRVLKSFGSIPEFSGATVEKVN 281 (319)
T ss_dssp TTSHHHHHH-HHH----------HHHHHHHHTCCCCCCCCHHHHHHHH
T ss_pred CccHHHHHH-Hhh----------HhHHHHHHHcCcccccchHHHHHHH
Confidence 998765442 221 122222 233666666666666553
No 8
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=100.00 E-value=1.3e-52 Score=436.69 Aligned_cols=257 Identities=32% Similarity=0.422 Sum_probs=239.2
Q ss_pred ceeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCccccCC
Q 004972 305 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 384 (721)
Q Consensus 305 ~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~ 384 (721)
-+||+|||+|+||++||..++ +|++|++||++++.++++.+. + .+..+++++++++++++++
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~~~~~~~~~~-------l----------~~~~~~~i~~~~~~~~~~~ 73 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSEKALEAAREQ-------I----------PEELLSKIEFTTTLEKVKD 73 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHH-------S----------CGGGGGGEEEESSCTTGGG
T ss_pred CCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCHHHHHHHHHH-------H----------HHHHhCCeEEeCCHHHHcC
Confidence 479999999999999999999 999999999999998887543 0 1334567888888877999
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhcccCCCCcEEEecCCCCCCCCCeeEEecCCCCCHH
Q 004972 385 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQ 464 (721)
Q Consensus 385 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~~l~~~~~~~~r~ig~h~~~p~~~~~lvEiv~~~~t~~e 464 (721)
||+|||||||+.++|+.+|++++.. +++|++||||+++++++++.+.++.+++|+|||+|++.++++|+++++.|+++
T Consensus 74 aDlVieavpe~~~vk~~l~~~l~~~--~~~IlasntSti~~~~~a~~~~~~~r~~G~Hf~~Pv~~~~lveiv~g~~t~~~ 151 (293)
T 1zej_A 74 CDIVMEAVFEDLNTKVEVLREVERL--TNAPLCSNTSVISVDDIAERLDSPSRFLGVHWMNPPHVMPLVEIVISRFTDSK 151 (293)
T ss_dssp CSEEEECCCSCHHHHHHHHHHHHTT--CCSCEEECCSSSCHHHHHTTSSCGGGEEEEEECSSTTTCCEEEEEECTTCCHH
T ss_pred CCEEEEcCcCCHHHHHHHHHHHhcC--CCCEEEEECCCcCHHHHHHHhhcccceEeEEecCccccCCEEEEECCCCCCHH
Confidence 9999999999999999999999887 89999999999999999998889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCeeEEEcCCCchhhhhhhhHHHHHHHHHHHcCCCHHHHHHHH-HhcCCCc---cHHHHHHhhchHHH
Q 004972 465 VILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAI-RSFGLPI---GPFQLLDLAGYGVA 540 (721)
Q Consensus 465 ~~~~~~~l~~~lG~~~v~v~d~~gfi~nRl~~~~~~Ea~~l~~~Gv~~~~ID~a~-~~~G~p~---Gpf~~~D~~Gld~~ 540 (721)
+++++.++++.+|++|++++|. |++||++.++++||+.++++|+++++||.++ .++|+|+ |||+++|++|||++
T Consensus 152 ~~~~~~~l~~~lGk~~v~v~d~--fi~Nrll~~~~~EA~~l~~~Gv~~e~id~~~~~g~g~~~~~~GP~~l~D~~Gld~~ 229 (293)
T 1zej_A 152 TVAFVEGFLRELGKEVVVCKGQ--SLVNRFNAAVLSEASRMIEEGVRAEDVDRVWKHHLGLLYTLFGPLGNLDYIGLDVA 229 (293)
T ss_dssp HHHHHHHHHHHTTCEEEEEESS--CHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHTTHHHHHHHHHHHHHHHHHCHHHH
T ss_pred HHHHHHHHHHHcCCeEEEeccc--ccHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHhchHHH
Confidence 9999999999999999999987 9999999999999999999999999999999 7999999 99999999999999
Q ss_pred HHHHHHHHHhCCCC-CCCcHHHHHHHHcCCCCcccCccccccCC
Q 004972 541 AATSKEFDKAFPDR-SFQSPLVDLLLKSGRNGKANGKGLYTYEK 583 (721)
Q Consensus 541 ~~~~~~l~~~~~~~-~~~~~~l~~~v~~G~~G~k~g~GfY~y~~ 583 (721)
+++++.+++.+++. +.|++++++|+++|++|+|+|+|||+|++
T Consensus 230 ~~~~~~l~~~~~~~~~~~~~~l~~~v~~G~lG~Ktg~Gfy~y~~ 273 (293)
T 1zej_A 230 YYASLYLYKRFGDEKFKPPEWLQEKIKKGEVGVKAGKGIYEYGP 273 (293)
T ss_dssp HHHHHHHHHHHCCGGGSCCHHHHHHHHTTCCBGGGTBSSSBCCT
T ss_pred HHHHHHHHHHcCCCcCCCCHHHHHHHHCCCCccccCCEeeecCc
Confidence 99999999998874 44889999999999999999999999954
No 9
>3hrx_A Probable enoyl-COA hydratase; the spiral fold, the crotonase superfamily, lyase; 1.85A {Thermus thermophilus}
Probab=100.00 E-value=3.2e-52 Score=428.63 Aligned_cols=247 Identities=29% Similarity=0.383 Sum_probs=225.4
Q ss_pred EEEEEecCcEEEEEeCCC-CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccCCCcccccch
Q 004972 6 VTMEVGNDGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPD 84 (721)
Q Consensus 6 v~~~~~~~~v~~i~l~~p-~~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~ 84 (721)
|.+|+ +|+|++|||||| +.|+||.+|+++|.++++++++|+++|+|||||.|++||+|+|++++..... .......
T Consensus 2 vl~E~-~dgVa~itlnrP~~~NAl~~~m~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~--~~~~~~~ 78 (254)
T 3hrx_A 2 VLKER-QDGVLVLTLNRPEKLNAITGELLDALYAALKEGEEDREVRALLLTGAGRAFSAGQDLTEFGDRKP--DYEAHLR 78 (254)
T ss_dssp EEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGTTTSCC--CHHHHTH
T ss_pred eEEEE-ECCEEEEEEcCCCcCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEeCCCCCcccCccHHHhcccch--hhHHHHH
Confidence 67888 799999999999 5899999999999999999999999999999999999999999999865322 1223334
Q ss_pred HHHHHHHHHHhhCCCcEEEEECCcccccchHhhhhcCEEEeeCCceEeCcccccCcccc---ccccccccCHHHHHHHHH
Q 004972 85 VSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMML 161 (721)
Q Consensus 85 ~~~~~~~~~l~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~a~~~~pe~~~Gl~P~---~~~l~r~~G~~~a~~l~l 161 (721)
..+.++ ..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|+ +++|+|++|..+|++|++
T Consensus 79 ~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~~~A~~lll 157 (254)
T 3hrx_A 79 RYNRVV-EALSGLEKPLVVAVNGVAAGAGMSLALWGDLRLAAVGASFTTAFVRIGLVPDSGLSFLLPRLVGLAKAQELLL 157 (254)
T ss_dssp HHHHHH-HHHHTCSSCEEEEECSEEETHHHHHHTTCSEEEEETTCEEECCGGGGTCCCCTTHHHHHHHHHCHHHHHHHHH
T ss_pred HHHHHH-HHHHhCCCCEEEEECCEeeehhhhhhhccceeeEcCCCEEEchhhCcCcCCcccHHHHHHHHhCcchHHHHhh
Confidence 455666 6799999999999999999999999999999999999999999999999997 899999999999999999
Q ss_pred cCCCcCHHHHHHcCCccEEcCCchHHHHHHHHHHHHHhcCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCCChhH
Q 004972 162 LSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 241 (721)
Q Consensus 162 tg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~ 241 (721)
||++++|+||+++||||+|||++++++++.++++++++.+|.+ .
T Consensus 158 tg~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a------------------------------------~ 201 (254)
T 3hrx_A 158 LSPRLSAEEALALGLVHRVVPAEKLMEEALSLAKELAQGPTRA------------------------------------Y 201 (254)
T ss_dssp HCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSCHHH------------------------------------H
T ss_pred cCcccCHHHHHHCCCeEEecCcHHHHHHHHHHHHHhhccchHH------------------------------------H
Confidence 9999999999999999999999999999999999999988643 3
Q ss_pred HHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcCC
Q 004972 242 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 292 (721)
Q Consensus 242 ~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~~ 292 (721)
..+|++++.+...+++++++.|...+..++.|+|++|++++|++||+|++.
T Consensus 202 ~~~K~~~~~~~~~~~~~~l~~e~~~~~~~~~s~d~~Eg~~AF~eKR~P~f~ 252 (254)
T 3hrx_A 202 ALTKKLLLETYRLSLTEALALEAVLQGQAGQTQDHEEGVRAFREKRPPRFQ 252 (254)
T ss_dssp HHHHHHHHHGGGSCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCCCCC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHhCCCCCCCC
Confidence 356788999999999999999999999999999999999999999998753
No 10
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=100.00 E-value=1.9e-52 Score=438.18 Aligned_cols=275 Identities=29% Similarity=0.422 Sum_probs=255.7
Q ss_pred CceeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcC-CCCHHHHHHhhcCceeccCc-cc
Q 004972 304 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRG-KLTQDKANNALKMLKGVLDY-SE 381 (721)
Q Consensus 304 ~~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~i~~~~~~-~~ 381 (721)
.++||+|||+|.||++||..++++|++|++||++++.++++.+.+.+.+...++++ .++..+.+....++..++++ +.
T Consensus 3 ~~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~~ 82 (283)
T 4e12_A 3 GITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLAQA 82 (283)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHHHH
Confidence 47899999999999999999999999999999999999999999988888888887 77777777777888888888 46
Q ss_pred cCCCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhcccCCCCcEEEecCCCCCCCCCeeEEecCCCC
Q 004972 382 FKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERT 461 (721)
Q Consensus 382 l~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~~l~~~~~~~~r~ig~h~~~p~~~~~lvEiv~~~~t 461 (721)
+++||+||+|||++.+.++.+++++.+++++++|++||||+++++++++.+.++.+++|+|||+|++.++++|++++..|
T Consensus 83 ~~~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS~~~~~~la~~~~~~~~~ig~h~~~p~~~~~lvevv~~~~t 162 (283)
T 4e12_A 83 VKDADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSSTLLPSDLVGYTGRGDKFLALHFANHVWVNNTAEVMGTTKT 162 (283)
T ss_dssp TTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHHHHHSCGGGEEEEEECSSTTTSCEEEEEECTTS
T ss_pred hccCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCCCCCHHHHHhhcCCCcceEEEccCCCcccCceEEEEeCCCC
Confidence 89999999999999999999999999999999999999999999999998888999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCeeEEE-cCCCchhhhhhhhHHHHHHHHHHHcCC-CHHHHHHHH-HhcCCCccHHHHHHhhchH
Q 004972 462 SAQVILDLMTVGKIIKKVPVVV-GNCTGFAVNRAFFPYSQSARLLVSLGV-DVFRIDSAI-RSFGLPIGPFQLLDLAGYG 538 (721)
Q Consensus 462 ~~e~~~~~~~l~~~lG~~~v~v-~d~~gfi~nRl~~~~~~Ea~~l~~~Gv-~~~~ID~a~-~~~G~p~Gpf~~~D~~Gld 538 (721)
++++++.+.++++.+|+.++++ ++.|||++||++.++++||++++++|+ +|++||+++ .++|+|+|||+++|++|||
T Consensus 163 ~~~~~~~~~~l~~~~g~~~v~v~~~~~g~i~nr~~~~~~~ea~~l~~~g~~~~~~id~~~~~~~g~~~Gp~~~~D~~Gld 242 (283)
T 4e12_A 163 DPEVYQQVVEFASAIGMVPIELKKEKAGYVLNSLLVPLLDAAAELLVDGIADPETIDKTWRIGTGAPKGPFEIFDIVGLT 242 (283)
T ss_dssp CHHHHHHHHHHHHHTTCEEEECSSCCTTTTHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHCCSSCHHHHHHHHCHH
T ss_pred CHHHHHHHHHHHHHcCCEEEEEecCCCCEEehHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhccCCCcCHHHHHHhccHH
Confidence 9999999999999999999999 899999999999999999999999975 999999999 7999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCC-CCcHHHHHHHHcCCCCcccCcccccc
Q 004972 539 VAAATSKEFDKAFPDRS-FQSPLVDLLLKSGRNGKANGKGLYTY 581 (721)
Q Consensus 539 ~~~~~~~~l~~~~~~~~-~~~~~l~~~v~~G~~G~k~g~GfY~y 581 (721)
+++++.++ ..++.. .|++++++||++|++|+|||+|||+|
T Consensus 243 ~~~~~~~~---~~~~~~~~~~~~~~~~v~~g~lG~k~g~Gfy~y 283 (283)
T 4e12_A 243 TAYNISSV---SGPKQREFAAYLKENYIDKGKLGLATGEGFYRY 283 (283)
T ss_dssp HHHHHHHT---SCHHHHHHHHHHHHHTGGGTCCBGGGTBSSSBC
T ss_pred HHHHHHhc---cccCcccCchHHHHHHHHCCCCceeCCeEeecC
Confidence 99999883 222222 27789999999999999999999998
No 11
>4fzw_C 1,2-epoxyphenylacetyl-COA isomerase; structural genomics, montreal-kingston bacterial structural initiative, BSGI, crotonase fold; 2.55A {Escherichia coli}
Probab=100.00 E-value=5.6e-52 Score=430.10 Aligned_cols=251 Identities=25% Similarity=0.307 Sum_probs=220.6
Q ss_pred CcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccCCCc---c
Q 004972 4 PRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGD---V 79 (721)
Q Consensus 4 ~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~~---~ 79 (721)
++|.+++ ++||++||||||+ .|+||.+|+.+|.+++++++.|+++|+|||||.|++||+|+|++++........ .
T Consensus 15 e~il~~~-~~gVa~itlnRP~~~NAl~~~m~~~L~~al~~~~~d~~vr~vVltg~G~~FcaG~Dl~~~~~~~~~~~~~~~ 93 (274)
T 4fzw_C 15 EFILSHV-EKGVMTLTLNRPERLNSFNDEMHAQLAECLKQVERDDTIRCLLLTGAGRGFCAGQDLNDRNVDPTGPAPDLG 93 (274)
T ss_dssp -CEEEEE-ETTEEEEEECCTTTTSCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCCC---------CCCHH
T ss_pred ccEEEEE-ECCEEEEEEcCcCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCceeCCcChHhhhccccccchHHH
Confidence 5789999 7999999999996 699999999999999999999999999999999999999999998764322211 1
Q ss_pred cccchHHHHHHHHHHhhCCCcEEEEECCcccccchHhhhhcCEEEeeCCceEeCcccccCcccc---ccccccccCHHHH
Q 004972 80 SLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKA 156 (721)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~a~~~~pe~~~Gl~P~---~~~l~r~~G~~~a 156 (721)
..+.+..+.++ +.|.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|+ +++|+|++|..+|
T Consensus 94 ~~~~~~~~~l~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A 172 (274)
T 4fzw_C 94 MSVERFYNPLV-RRLAKLPKPVICAVNGVAAGAGATLALGGDIVIAARSAKFVMAFSKLGLIPDCGGTWLLPRVAGRARA 172 (274)
T ss_dssp HHHHHTHHHHH-HHHHHCSSCEEEEECSCEETHHHHHHHTSSEEEEETTCEEECCGGGTTCCCTTTHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHHH-HHHHHCCCCEEEEECCceeecCceeeeccceEEECCCCEEECcccCcccCCCccHHHHHHHHhhHHHH
Confidence 12222344555 6789999999999999999999999999999999999999999999999997 8999999999999
Q ss_pred HHHHHcCCCcCHHHHHHcCCccEEcCCchHHHHHHHHHHHHHhcCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCC
Q 004972 157 IEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAP 236 (721)
Q Consensus 157 ~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (721)
++|++||++++|+||+++||||+|||++++++++.++|+++++.+|.+
T Consensus 173 ~~llltg~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a-------------------------------- 220 (274)
T 4fzw_C 173 MGLALLGNQLSAEQAHEWGMIWQVVDDETLADTAQQLARHLATQPTFG-------------------------------- 220 (274)
T ss_dssp HHHHHHCCCEEHHHHHHTTSSSEEECGGGHHHHHHHHHHHHTTSCHHH--------------------------------
T ss_pred HHHHHhCCcCCHHHHHHCCCceEEeChHHHHHHHHHHHHHHHcCCHHH--------------------------------
Confidence 999999999999999999999999999999999999999999988642
Q ss_pred CChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcCC
Q 004972 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 292 (721)
Q Consensus 237 ~~~A~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~~ 292 (721)
...+|++++.+...+++++++.|.+.+..++.|+|++|++++|++||+|.+.
T Consensus 221 ----~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~Egv~AF~eKR~P~f~ 272 (274)
T 4fzw_C 221 ----LGLIKQAINSAETNTLDTQLDLERDYQRLAGRSADYREGVSAFLAKRSPQFT 272 (274)
T ss_dssp ----HHHHHHHHHHHTSSCHHHHHHHHHHHHHHHTTSHHHHHHHHHHHC-CCCCCC
T ss_pred ----HHHHHHHHHHhhhCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHhCCCCCCCC
Confidence 3356788999999999999999999999999999999999999999998764
No 12
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=100.00 E-value=4.1e-51 Score=432.60 Aligned_cols=283 Identities=33% Similarity=0.526 Sum_probs=261.3
Q ss_pred CCCCCceeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHH-----HHHHhhcCce
Q 004972 300 LKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD-----KANNALKMLK 374 (721)
Q Consensus 300 ~~~~~~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-----~~~~~~~~i~ 374 (721)
.|.++|+||+|||+|.||++||..|+++|++|++||++++.++.+.+.+++.++.++++|.++.. +.+....+++
T Consensus 10 ~~~~~~~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~ 89 (302)
T 1f0y_A 10 AKKIIVKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIA 89 (302)
T ss_dssp --CCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEE
T ss_pred cccccCCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceE
Confidence 35556889999999999999999999999999999999999999888888888888888877644 4444556788
Q ss_pred eccCcc-ccCCCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhcccCCCCcEEEecCCCCCCCCCee
Q 004972 375 GVLDYS-EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLL 453 (721)
Q Consensus 375 ~~~~~~-~l~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~~l~~~~~~~~r~ig~h~~~p~~~~~lv 453 (721)
.+++++ .+++||+||+|||++.++++.+++++.+++++++||+||+|+++++++++.+.++++++|+||++|++.++++
T Consensus 90 ~~~~~~~~~~~aD~Vi~avp~~~~~~~~v~~~l~~~~~~~~iv~s~ts~i~~~~l~~~~~~~~~~~g~h~~~P~~~~~~~ 169 (302)
T 1f0y_A 90 TSTDAASVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTSSLQITSIANATTRQDRFAGLHFFNPVPVMKLV 169 (302)
T ss_dssp EESCHHHHTTSCSEEEECCCSCHHHHHHHHHHHTTTSCTTCEEEECCSSSCHHHHHTTSSCGGGEEEEEECSSTTTCCEE
T ss_pred EecCHHHhhcCCCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEECCCCCCHHHHHHhcCCcccEEEEecCCCcccCceE
Confidence 888885 7899999999999999999999999999999999999999999999999988888999999999999999999
Q ss_pred EEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCchhhhhhhhHHHHHHHHHHHcC-CCHHHHHHHH-HhcCCCccHHHH
Q 004972 454 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLG-VDVFRIDSAI-RSFGLPIGPFQL 531 (721)
Q Consensus 454 Eiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~~gfi~nRl~~~~~~Ea~~l~~~G-v~~~~ID~a~-~~~G~p~Gpf~~ 531 (721)
|+++++.+++++++.+.++++.+|+.++++++.+||++||++.++++|+++++++| +++++||.++ .++|||+|||++
T Consensus 170 ~i~~g~~~~~e~~~~~~~l~~~~G~~~v~~~~~~g~i~nr~l~~~~~Ea~~l~~~g~~~~~~id~~~~~g~g~p~GP~~~ 249 (302)
T 1f0y_A 170 EVIKTPMTSQKTFESLVDFSKALGKHPVSCKDTPGFIVNRLLVPYLMEAIRLYERGDASKEDIDTAMKLGAGYPMGPFEL 249 (302)
T ss_dssp EEECCTTCCHHHHHHHHHHHHHTTCEEEEECSCTTTTHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHCCSSCHHHH
T ss_pred EEeCCCCCCHHHHHHHHHHHHHcCCceEEecCcccccHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHhCCCCCCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999996 5999999999 899999999999
Q ss_pred HHhhchHHHHHHHHHHHHhC-CCC-CCCcHHHHHHHHcCCCCcccCccccccC
Q 004972 532 LDLAGYGVAAATSKEFDKAF-PDR-SFQSPLVDLLLKSGRNGKANGKGLYTYE 582 (721)
Q Consensus 532 ~D~~Gld~~~~~~~~l~~~~-~~~-~~~~~~l~~~v~~G~~G~k~g~GfY~y~ 582 (721)
+|.+|+|+++++++.+++.+ +++ +.|++++++|+++|++|+|+|+|||+|+
T Consensus 250 ~D~~Gld~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~g~~G~k~g~Gfy~y~ 302 (302)
T 1f0y_A 250 LDYVGLDTTKFIVDGWHEMDAENPLHQPSPSLNKLVAENKFGKKTGEGFYKYK 302 (302)
T ss_dssp HHHHCHHHHHHHHHHHHHTTTTCGGGCCCHHHHHHHHTTCCBTTTTBSSSBCC
T ss_pred HHHHHHHHHHHHHHHHHHHccCCCccCcCHHHHHHHHcCCCccccCcEeeeCC
Confidence 99999999999999999988 775 4588999999999999999999999994
No 13
>4fzw_A 2,3-dehydroadipyl-COA hydratase; structural genomics, montreal-kingston bacterial structural initiative, BSGI, crotonase fold; 2.55A {Escherichia coli}
Probab=100.00 E-value=5.1e-52 Score=426.96 Aligned_cols=249 Identities=30% Similarity=0.436 Sum_probs=225.2
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccCCCcccc
Q 004972 3 APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSL 81 (721)
Q Consensus 3 ~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~ 81 (721)
++.+.+++ +++|++||||||+ .|+||.+|+.+|.+++++++.|+++++|||||.|++||+|+|++++...... ..
T Consensus 4 ms~l~ve~-~~~Va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~---~~ 79 (258)
T 4fzw_A 4 MSELIVSR-QQRVLLLTLNRPAARNALNNALLMQLVNELEAAATDTSISVCVITGNARFFAAGADLNEMAEKDLA---AT 79 (258)
T ss_dssp -CEEEEEE-ETTEEEEEEECGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEECCSSEEEECBCHHHHHTCCHH---HH
T ss_pred CCcEEEEE-ECCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCCCeEEEEEeCCCCceeCCCchhhhccchhh---hH
Confidence 34589999 7999999999995 6999999999999999999999999999999999999999999998643211 11
Q ss_pred cchHHHHHHHHHHhhCCCcEEEEECCcccccchHhhhhcCEEEeeCCceEeCcccccCcccc---ccccccccCHHHHHH
Q 004972 82 MPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIE 158 (721)
Q Consensus 82 ~~~~~~~~~~~~l~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~a~~~~pe~~~Gl~P~---~~~l~r~~G~~~a~~ 158 (721)
.......++ ..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|+ +++|+|++|..+|++
T Consensus 80 ~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~ 158 (258)
T 4fzw_A 80 LNDTRPQLW-ARLQAFNKPLIAAVNGYALGAGCELALLCDVVVAGENARFGLPEITLGIMPGAGGTQRLIRSVGKSLASK 158 (258)
T ss_dssp HTCSHHHHH-HHHHTCCSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCSSHHHHHHHHHCHHHHHH
T ss_pred HHhHHHHHH-HHHHHCCCCEEEEEcCcceeeeeEeecccceEEECCCCEEECcccCCCcCCCchHHHHHHHHhCHHHHHH
Confidence 122334555 6699999999999999999999999999999999999999999999999997 899999999999999
Q ss_pred HHHcCCCcCHHHHHHcCCccEEcCCchHHHHHHHHHHHHHhcCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCCC
Q 004972 159 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 238 (721)
Q Consensus 159 l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (721)
|++||++++|+||+++||||+|||++++++++.++++++++.+|.+
T Consensus 159 llltg~~i~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a---------------------------------- 204 (258)
T 4fzw_A 159 MVLSGESITAQQAQQAGLVSDVFPSDLTLEYALQLASKMARHSPLA---------------------------------- 204 (258)
T ss_dssp HHHHCCCEEHHHHHHHTSCSEEECTTTHHHHHHHHHHHHTTSCHHH----------------------------------
T ss_pred HHHcCCcCcHHHHHHCCCeeEEeCchHHHHHHHHHHHHHHhCCHHH----------------------------------
Confidence 9999999999999999999999999999999999999999988743
Q ss_pred hhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcCC
Q 004972 239 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 292 (721)
Q Consensus 239 ~A~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~~ 292 (721)
...+|++++.+...+++++++.|.+.+..++.|+|++|++++|++||+|.+.
T Consensus 205 --~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~Eg~~AF~eKR~P~f~ 256 (258)
T 4fzw_A 205 --LQAAKQALRQSQEVALQAGLAQERQLFTLLAATEDRHEGISAFLQKRTPDFK 256 (258)
T ss_dssp --HHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCCCCC
T ss_pred --HHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHhCCCCCCCC
Confidence 3356788999999999999999999999999999999999999999998753
No 14
>3kqf_A Enoyl-COA hydratase/isomerase family protein; IDP02329, structural genomic for structural genomics of infectious diseases, csgid; HET: MSE; 1.80A {Bacillus anthracis}
Probab=100.00 E-value=1.6e-50 Score=417.70 Aligned_cols=253 Identities=26% Similarity=0.450 Sum_probs=227.6
Q ss_pred CCCCcEEEE-EecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCC-CCCcCCCCchhhhhccCCC
Q 004972 1 MAAPRVTME-VGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNG-GRFSGGFDINVFQKVHGAG 77 (721)
Q Consensus 1 m~~~~v~~~-~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g-~~F~aG~Dl~~~~~~~~~~ 77 (721)
|++++|.++ . +++|++||||||+ .|++|.+|+++|.+++++++.|+++|+|||||.| +.||+|+|++++.... ..
T Consensus 5 m~~~~v~~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~-~~ 82 (265)
T 3kqf_A 5 LQLQNISVDYA-TPHVVKISLNRERQANSLSLALLEELQNILTQINEEANTRVVILTGAGEKAFCAGADLKERAGMN-EE 82 (265)
T ss_dssp --CCSEEEECC-STTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESSSSEEECCBCHHHHTTCC-HH
T ss_pred ccCCeEEEEEe-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCeeeeCcChHHHhccC-HH
Confidence 668899999 7 7999999999996 6999999999999999999999999999999999 8999999999986532 11
Q ss_pred cccccchHHHHHHHHHHhhCCCcEEEEECCcccccchHhhhhcCEEEeeCCceEeCcccccCcccc---ccccccccCHH
Q 004972 78 DVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLS 154 (721)
Q Consensus 78 ~~~~~~~~~~~~~~~~l~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~a~~~~pe~~~Gl~P~---~~~l~r~~G~~ 154 (721)
....+....+.++ +.+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|+ +++|+|++|..
T Consensus 83 ~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~ 161 (265)
T 3kqf_A 83 QVRHAVSMIRTTM-EMVEQLPQPVIAAINGIALGGGTELSLACDFRIAAESASLGLTETTLAIIPGAGGTQRLPRLIGVG 161 (265)
T ss_dssp HHHHHHHHHHHHH-HHHHTCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCSSHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHHH-HHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCcEEECcccccCcCCCccHHHHHHHHhCHH
Confidence 1222333445556 6799999999999999999999999999999999999999999999999997 89999999999
Q ss_pred HHHHHHHcCCCcCHHHHHHcCCccEEcCCchHHHHHHHHHHHHHhcCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHh
Q 004972 155 KAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKT 234 (721)
Q Consensus 155 ~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (721)
+|++|++||++++|+||+++||||+|||++++++++.++|+++++.+|.
T Consensus 162 ~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~------------------------------- 210 (265)
T 3kqf_A 162 RAKELIYTGRRISAQEAKEYGLVEFVVPVHLLEEKAIEIAEKIASNGPI------------------------------- 210 (265)
T ss_dssp HHHHHHHHCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSCHH-------------------------------
T ss_pred HHHHHHHcCCCCCHHHHHHCCCccEEeCHHHHHHHHHHHHHHHHcCCHH-------------------------------
Confidence 9999999999999999999999999999999999999999999998864
Q ss_pred CCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcCC
Q 004972 235 APNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 292 (721)
Q Consensus 235 ~~~~~A~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~~ 292 (721)
|+..+|++++.+...+++++++.|.+.+..++.|+|++|++++|++||+|.+.
T Consensus 211 -----a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~p~f~ 263 (265)
T 3kqf_A 211 -----AVRLAKEAISNGIQVDLHTGLQMEKQAYEGVIHTKDRLEGLQAFKEKRTPMYK 263 (265)
T ss_dssp -----HHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHTTSCCCCC
T ss_pred -----HHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCCCC
Confidence 33466788999989999999999999999999999999999999999988753
No 15
>3pea_A Enoyl-COA hydratase/isomerase family protein; structural genomics, center for structural genomics of infec diseases, csgid; HET: FLC PG4; 1.82A {Bacillus anthracis}
Probab=100.00 E-value=1.3e-50 Score=417.44 Aligned_cols=252 Identities=37% Similarity=0.609 Sum_probs=226.0
Q ss_pred CCcEEEEEecCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccCCCccccc
Q 004972 3 APRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLM 82 (721)
Q Consensus 3 ~~~v~~~~~~~~v~~i~l~~p~~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~ 82 (721)
++++.+++ +++|++||||||+.|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++...........+
T Consensus 5 ~~~v~~~~-~~~v~~itlnrp~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~ 83 (261)
T 3pea_A 5 LKFLSVRV-EDHIAVATLNHAPANAMSSQVMHDVTELIDQVEKDDNIRVVVIHGEGRFFSAGADIKEFTSVTEAKQATEL 83 (261)
T ss_dssp CSSEEEEE-ETTEEEEEECCTTTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGSSTTCCHHHHHHH
T ss_pred ccceEEEE-ECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCceeCCcCHHHHhhcCchhHHHHH
Confidence 36799999 79999999999966999999999999999999999999999999999999999999998653221111222
Q ss_pred chHHHHHHHHHHhhCCCcEEEEECCcccccchHhhhhcCEEEeeCCceEeCcccccCcccc---ccccccccCHHHHHHH
Q 004972 83 PDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEM 159 (721)
Q Consensus 83 ~~~~~~~~~~~l~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~a~~~~pe~~~Gl~P~---~~~l~r~~G~~~a~~l 159 (721)
....+.++ ..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|+ +++|+|++|..+|++|
T Consensus 84 ~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~a~~l 162 (261)
T 3pea_A 84 AQLGQVTF-ERVEKCSKPVIAAIHGAALGGGLEFAMSCHMRFATESAKLGLPELTLGLIPGFAGTQRLPRYVGKAKACEM 162 (261)
T ss_dssp HHHHHHHH-HHHHTCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCSSHHHHHHHHHCHHHHHHH
T ss_pred HHHHHHHH-HHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCCEEECcccccCcCCCccHHHHHHHHhCHHHHHHH
Confidence 23334455 6799999999999999999999999999999999999999999999999997 8999999999999999
Q ss_pred HHcCCCcCHHHHHHcCCccEEcCCchHHHHHHHHHHHHHhcCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCCCh
Q 004972 160 MLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMP 239 (721)
Q Consensus 160 ~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (721)
++||++++|+||+++||||+|||++++++++.++|+++++.+|.
T Consensus 163 ~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~------------------------------------ 206 (261)
T 3pea_A 163 MLTSTPITGAEALKWGLVNGVFAEETFLDDTLKVAKQIAGKSPA------------------------------------ 206 (261)
T ss_dssp HHHCCCEEHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSCHH------------------------------------
T ss_pred HHcCCCCCHHHHHHCCCccEecCHHHHHHHHHHHHHHHHcCCHH------------------------------------
Confidence 99999999999999999999999999999999999999998864
Q ss_pred hHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcCC
Q 004972 240 QHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 292 (721)
Q Consensus 240 A~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~~ 292 (721)
|+..+|++++.+...+++++++.|.+.+..++.|+|++|++++|++||+|...
T Consensus 207 a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~P~f~ 259 (261)
T 3pea_A 207 TARAVLELLQTTKSSHYYEGVQREAQIFGEVFTSEDGREGVAAFLEKRKPSFS 259 (261)
T ss_dssp HHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHTTSCCCCC
T ss_pred HHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCCCC
Confidence 33456788888888889999999999999999999999999999999988753
No 16
>3i47_A Enoyl COA hydratase/isomerase (crotonase); structural genomics; 1.58A {Legionella pneumophila subsp} SCOP: c.14.1.0
Probab=100.00 E-value=2e-50 Score=417.17 Aligned_cols=255 Identities=22% Similarity=0.311 Sum_probs=226.5
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccCCCc-
Q 004972 1 MAAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGD- 78 (721)
Q Consensus 1 m~~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~~- 78 (721)
|+++.|.+++ +++|++||||||+ .|++|.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++........
T Consensus 1 M~~~~v~~~~-~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~ 79 (268)
T 3i47_A 1 MSLSDLLYEI-QDKVGLLTMNRISKHNAFDNQLLTEMRIRLDSAINDTNVRVIVLKANGKHFSAGADLTWMQSMANFTEE 79 (268)
T ss_dssp -CCCSEEEEE-ETTEEEEEECCTTTTTCBCHHHHHHHHHHHHHHHHCTTCSEEEEEECSSCSBCSBCHHHHHHHHTCCHH
T ss_pred CCCCEEEEEE-ECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCeeCCCChhhhhccccccHH
Confidence 8999999999 7999999999996 699999999999999999999999999999999999999999999865322211
Q ss_pred -ccccchHHHHHHHHHHhhCCCcEEEEECCcccccchHhhhhcCEEEeeCCceEeCcccccCcccc--ccccccccCHHH
Q 004972 79 -VSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG--TQRLPRLVGLSK 155 (721)
Q Consensus 79 -~~~~~~~~~~~~~~~l~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~a~~~~pe~~~Gl~P~--~~~l~r~~G~~~ 155 (721)
..........++ ..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|+ ..+|+|++|..+
T Consensus 80 ~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~l~~~vG~~~ 158 (268)
T 3i47_A 80 ENLEDSLVLGNLM-YSISQSPKPTIAMVQGAAFGGGAGLAAACDIAIASTSARFCFSEVKLGLIPAVISPYVVRAIGERA 158 (268)
T ss_dssp HHHHHHHHHHHHH-HHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCTTTHHHHHHHHCHHH
T ss_pred HHHHHHHHHHHHH-HHHHhCCCCEEEEECCEEEhHhHHHHHhCCEEEEcCCCEEECcccccCCCcccHHHHHHHHhCHHH
Confidence 111122334555 6799999999999999999999999999999999999999999999999997 448999999999
Q ss_pred HHHHHHcCCCcCHHHHHHcCCccEEcCCchHHHHHHHHHHHHHhcCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhC
Q 004972 156 AIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTA 235 (721)
Q Consensus 156 a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (721)
|++|++||++++|+||+++||||+|||++++++++.++|++|++.+|.+
T Consensus 159 A~~llltg~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~a~~la~~~~~a------------------------------- 207 (268)
T 3i47_A 159 AKMLFMSAEVFDATRAYSLNLVQHCVPDDTLLEFTLKYASQISNNAPEA------------------------------- 207 (268)
T ss_dssp HHHHHHHCCEEEHHHHHHTTSCSEEECGGGHHHHHHHHHHHHHTSCHHH-------------------------------
T ss_pred HHHHHHcCCccCHHHHHHcCCCcEeeChhHHHHHHHHHHHHHHcCCHHH-------------------------------
Confidence 9999999999999999999999999999999999999999999988643
Q ss_pred CCChhHHHHHHHHHHhhcCCHHH-HHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcCCC
Q 004972 236 PNMPQHQACLDVIEEGIVHGGYS-GVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 293 (721)
Q Consensus 236 ~~~~A~~~~~~~i~~~~~~~~~~-~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~~~ 293 (721)
...+|++++.....++++ .++.|.+.+..++.|+|++|++++|++||+|...+
T Consensus 208 -----~~~~K~~l~~~~~~~l~~~~~~~e~~~~~~~~~s~d~~eg~~AF~ekR~p~f~~ 261 (268)
T 3i47_A 208 -----VKNSKQLAQYVANKKIDEELVRYTASLIAHKRVSDEGQEGLKAFLNKEIPNWNE 261 (268)
T ss_dssp -----HHHHHHHHHHHTTCCCSHHHHHHHHHHHHHHHHSHHHHHHHHHHHHTCCCTTC-
T ss_pred -----HHHHHHHHHhhhcCChhHHHHHHHHHHHHHHhcCHHHHHHHHHHHcCCCCCCCC
Confidence 335678888888888887 78999999999999999999999999999988654
No 17
>3moy_A Probable enoyl-COA hydratase; ssgcid, seattle structural genomics center for infectious DI enoyl COA, actinobacteria, lyase; 1.50A {Mycobacterium smegmatis}
Probab=100.00 E-value=3.3e-50 Score=414.66 Aligned_cols=251 Identities=31% Similarity=0.440 Sum_probs=227.0
Q ss_pred CCCCcEEEEEecCc-EEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccCCCc
Q 004972 1 MAAPRVTMEVGNDG-VAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGD 78 (721)
Q Consensus 1 m~~~~v~~~~~~~~-v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~~ 78 (721)
|+++.|.++. +++ |++||||||+ .|++|.+|+.+|.+++++++.|+++|+|||||.|++||+|+|++++.......
T Consensus 6 m~~~~i~~~~-~~~gv~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~- 83 (263)
T 3moy_A 6 TTYTTIATSR-PVAGVGLIRLDRPDALNALNQTLEAEVLDAARDFDADLEIGAIVVTGSERAFAAGADIAEMVTLTPHQ- 83 (263)
T ss_dssp CCCSSEEEEC-CSTTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECCSSEEEESBCHHHHTTCCHHH-
T ss_pred CCCCeEEEEE-eCCeEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCeeCCcChHHHhccCchh-
Confidence 7788899999 566 9999999996 69999999999999999999999999999999999999999999986532111
Q ss_pred ccccchHHHHHHHHHHhhCCCcEEEEECCcccccchHhhhhcCEEEeeCCceEeCcccccCcccc---ccccccccCHHH
Q 004972 79 VSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSK 155 (721)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~a~~~~pe~~~Gl~P~---~~~l~r~~G~~~ 155 (721)
........++ +.+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|+ +++|+|++|..+
T Consensus 84 --~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~ 160 (263)
T 3moy_A 84 --ARERNLLSGW-DSLTQVRKPIVAAVAGYALGGGCELAMLCDLVIAADTARFGQPEITLGILPGLGGTQRLTRAVGKAK 160 (263)
T ss_dssp --HHHTTTTHHH-HHHTTCCSCEEEEECBEEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCSSSTTTHHHHHHCHHH
T ss_pred --HHHHHHHHHH-HHHHhCCCCEEEEECCEeehHHHHHHHHCCEEEecCCCEEeCcccccCCCCchhHHHHHHHHhCHHH
Confidence 1122233455 6689999999999999999999999999999999999999999999999997 899999999999
Q ss_pred HHHHHHcCCCcCHHHHHHcCCccEEcCCchHHHHHHHHHHHHHhcCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhC
Q 004972 156 AIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTA 235 (721)
Q Consensus 156 a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (721)
|++|++||++++|+||+++||||+|+|++++++++.++|+++++.+|.
T Consensus 161 A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~-------------------------------- 208 (263)
T 3moy_A 161 AMDLCLTGRSLTAEEAERVGLVSRIVPAADLLDEALAVAQRIARMSRP-------------------------------- 208 (263)
T ss_dssp HHHHHHHCCEEEHHHHHHTTSCSEEECGGGHHHHHHHHHHHHHHSCHH--------------------------------
T ss_pred HHHHHHcCCCCCHHHHHHCCCccEecCchHHHHHHHHHHHHHHhCCHH--------------------------------
Confidence 999999999999999999999999999999999999999999998864
Q ss_pred CCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcCC
Q 004972 236 PNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 292 (721)
Q Consensus 236 ~~~~A~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~~ 292 (721)
|+..+|++++.+...+++++++.|.+.+..++.|+|++|++++|++||+|.+.
T Consensus 209 ----a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~AF~ekR~p~f~ 261 (263)
T 3moy_A 209 ----AGRAVKDAINEAFERPLSAGMRYERDAFYAMFDTHDQTEGMTAFLEKRTPEFT 261 (263)
T ss_dssp ----HHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHTTSHHHHHHHHHHHTTSCCCCC
T ss_pred ----HHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCCCCC
Confidence 33466888999889999999999999999999999999999999999988753
No 18
>3hin_A Putative 3-hydroxybutyryl-COA dehydratase; structural genomics, protein structure INI NEW YORK structural genomix research consortium; 2.00A {Rhodopseudomonas palustris}
Probab=100.00 E-value=1.8e-50 Score=418.28 Aligned_cols=252 Identities=24% Similarity=0.384 Sum_probs=225.1
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccCCCcc
Q 004972 1 MAAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDV 79 (721)
Q Consensus 1 m~~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~~~ 79 (721)
|+++.|.+++ +++|++||||||+ .|+||.+|+++|.++++++ |+++|+|||||.|+.||+|+|++++..... ...
T Consensus 13 m~~~~v~~~~-~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~--d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~-~~~ 88 (275)
T 3hin_A 13 ADPSTLVVDT-VGPVLTIGLNRPKKRNALNDGLMAALKDCLTDI--PDQIRAVVIHGIGDHFSAGLDLSELRERDA-TEG 88 (275)
T ss_dssp CCGGGEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHTSSC--CTTCCEEEEEESSSCSBCCBCGGGCCCCCH-HHH
T ss_pred CCCCeEEEEE-ECCEEEEEEcCCCcCCCCCHHHHHHHHHHHHHh--CcCceEEEEECCCCCccCCCCHHHHhccCh-hhH
Confidence 5678899999 7999999999995 7999999999999999999 579999999999999999999999864211 111
Q ss_pred cccchHHHHHHHHHHhhCCCcEEEEECCcccccchHhhhhcCEEEeeCCceEeCcccccCcccc---ccccccccCHHHH
Q 004972 80 SLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKA 156 (721)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~a~~~~pe~~~Gl~P~---~~~l~r~~G~~~a 156 (721)
.......+.++ ..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|+ +++|+|++|..+|
T Consensus 89 ~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A 167 (275)
T 3hin_A 89 LVHSQTWHRVF-DKIQYCRVPVIAALKGAVIGGGLELACAAHIRVAEASAYYALPEGSRGIFVGGGGSVRLPRLIGVARM 167 (275)
T ss_dssp HHHHHHHHHHH-HHHHTCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHHCHHHH
T ss_pred HHHHHHHHHHH-HHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCCEEECchhccCCCCCccHHHHHHHHhCHHHH
Confidence 12223344556 6799999999999999999999999999999999999999999999999997 8999999999999
Q ss_pred HHHHHcCCCcCHHHHHHcCCccEEcCCchHHHHHHHHHHHHHhcCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCC
Q 004972 157 IEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAP 236 (721)
Q Consensus 157 ~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (721)
++|++||++++|+||+++||||+|||++++.+++.++|++|++.+|.+
T Consensus 168 ~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~ia~~~p~a-------------------------------- 215 (275)
T 3hin_A 168 ADMMLTGRVYSAAEGVVHGFSQYLIENGSAYDKALELGNRVAQNAPLT-------------------------------- 215 (275)
T ss_dssp HHHHHHCCCEEHHHHHHHTSCSEEESSSCHHHHHHHHHHHHTTSCHHH--------------------------------
T ss_pred HHHHHcCCCCCHHHHHHCCCCCEEeChhHHHHHHHHHHHHHHhCCHHH--------------------------------
Confidence 999999999999999999999999999999999999999999988642
Q ss_pred CChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcCCC
Q 004972 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 293 (721)
Q Consensus 237 ~~~A~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~~~ 293 (721)
...+|++++.....+++++++.|...+..++.|+|++|++++|++||+|.+..
T Consensus 216 ----~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~eg~~AF~ekR~p~f~~ 268 (275)
T 3hin_A 216 ----NFAVLQALPMIAEANPQTGLLMESLMATVAQSDQEAKTRIRAFLDHKTAKVRE 268 (275)
T ss_dssp ----HHHHHTHHHHHHHSCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHC--
T ss_pred ----HHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCCCCC
Confidence 33567888888889999999999999999999999999999999999998754
No 19
>3h81_A Enoyl-COA hydratase ECHA8; niaid, decode, infectious disease, MPCS, fatty acid metaboli metabolism, lyase, structural genomics; 1.80A {Mycobacterium tuberculosis} PDB: 3q0j_A* 3pzk_A 3q0g_A*
Probab=100.00 E-value=4.5e-50 Score=415.97 Aligned_cols=251 Identities=29% Similarity=0.478 Sum_probs=225.3
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccCCCcc
Q 004972 1 MAAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDV 79 (721)
Q Consensus 1 m~~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~~~ 79 (721)
|+++.|.+++ +++|++||||||+ .|+||.+|+.+|.+++++++.|+++|+|||||.|++||+|+|++++.......
T Consensus 22 m~~~~v~~~~-~~~va~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~-- 98 (278)
T 3h81_A 22 MTYETILVER-DQRVGIITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSAKAFAAGADIKEMADLTFAD-- 98 (278)
T ss_dssp -CCSSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEECCSSEEECCBCSHHHHTCCHHH--
T ss_pred CCCCeEEEEE-ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCCeecCcCHHHHhccChhh--
Confidence 7788899999 7899999999996 69999999999999999999999999999999999999999999986532111
Q ss_pred cccchHHHHHHHHHHhhCCCcEEEEECCcccccchHhhhhcCEEEeeCCceEeCcccccCcccc---ccccccccCHHHH
Q 004972 80 SLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKA 156 (721)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~a~~~~pe~~~Gl~P~---~~~l~r~~G~~~a 156 (721)
......... + ..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|+ +++|+|++|..+|
T Consensus 99 ~~~~~~~~~-~-~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~~~A 176 (278)
T 3h81_A 99 AFTADFFAT-W-GKLAAVRTPTIAAVAGYALGGGCELAMMCDVLIAADTAKFGQPEIKLGVLPGMGGSQRLTRAIGKAKA 176 (278)
T ss_dssp HHHHTTTGG-G-HHHHTCCSCEEEEECBEEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHHCHHHH
T ss_pred HHHHHHHHH-H-HHHHhCCCCEEEEECCeeehHHHHHHHHCCEEEEcCCCEEECchhhcCcCCCccHHHHHHHHhCHHHH
Confidence 001111112 4 5688999999999999999999999999999999999999999999999997 8999999999999
Q ss_pred HHHHHcCCCcCHHHHHHcCCccEEcCCchHHHHHHHHHHHHHhcCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCC
Q 004972 157 IEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAP 236 (721)
Q Consensus 157 ~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (721)
++|++||++++|+||+++||||+|||++++++++.++|++|++.+|.
T Consensus 177 ~~l~ltG~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~--------------------------------- 223 (278)
T 3h81_A 177 MDLILTGRTMDAAEAERSGLVSRVVPADDLLTEARATATTISQMSAS--------------------------------- 223 (278)
T ss_dssp HHHHHHCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSCHH---------------------------------
T ss_pred HHHHHhCCCcCHHHHHHCCCccEEeChhHHHHHHHHHHHHHHhCCHH---------------------------------
Confidence 99999999999999999999999999999999999999999998864
Q ss_pred CChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcCC
Q 004972 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 292 (721)
Q Consensus 237 ~~~A~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~~ 292 (721)
|+..+|++++.+...+++++++.|.+.+..++.|+|++|++++|++||+|.+.
T Consensus 224 ---a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~AF~ekR~P~f~ 276 (278)
T 3h81_A 224 ---AARMAKEAVNRAFESSLSEGLLYERRLFHSAFATEDQSEGMAAFIEKRAPQFT 276 (278)
T ss_dssp ---HHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHTTSHHHHHHHHHHHTTSCCCCC
T ss_pred ---HHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCCCC
Confidence 33466888999889999999999999999999999999999999999988753
No 20
>3myb_A Enoyl-COA hydratase; ssgcid, struct genomics, seattle structural genomics center for infectious lyase; 1.55A {Mycobacterium smegmatis}
Probab=100.00 E-value=1.1e-49 Score=415.30 Aligned_cols=254 Identities=21% Similarity=0.309 Sum_probs=225.9
Q ss_pred CCCCcEEEEEec--CcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccCCC
Q 004972 1 MAAPRVTMEVGN--DGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAG 77 (721)
Q Consensus 1 m~~~~v~~~~~~--~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~ 77 (721)
|+++ |.++. + ++|++||||||+ .|+||.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++.......
T Consensus 22 m~~~-v~~~~-~~~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~F~aG~Dl~~~~~~~~~~ 99 (286)
T 3myb_A 22 MSEP-LLLQD-RDERGVVTLTLNRPQAFNALSEAMLAALGEAFGTLAEDESVRAVVLAASGKAFCAGHDLKEMRAEPSRE 99 (286)
T ss_dssp --CC-SEEEE-ECTTSEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEECSSCSBCCBCHHHHHSSCCHH
T ss_pred Ccee-EEEEE-ecCCCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCccCCcChhhhhccccHH
Confidence 6655 88888 6 899999999996 69999999999999999999999999999999999999999999987521111
Q ss_pred cccccchHHHHHHHHHHhhCCCcEEEEECCcccccchHhhhhcCEEEeeCCceEeCcccccCcccc--ccccccccCHHH
Q 004972 78 DVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG--TQRLPRLVGLSK 155 (721)
Q Consensus 78 ~~~~~~~~~~~~~~~~l~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~a~~~~pe~~~Gl~P~--~~~l~r~~G~~~ 155 (721)
....+....++++ ..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|+ +++|+|++|..+
T Consensus 100 ~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~lGl~~~g~~~~L~r~vG~~~ 178 (286)
T 3myb_A 100 YYEKLFARCTDVM-LAIQRLPAPVIARVHGIATAAGCQLVAMCDLAVATRDARFAVSGINVGLFCSTPGVALSRNVGRKA 178 (286)
T ss_dssp HHHHHHHHHHHHH-HHHHHSSSCEEEEECSCEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCHHHHHHHTTTSCHHH
T ss_pred HHHHHHHHHHHHH-HHHHcCCCCEEEEECCeehHHHHHHHHhCCEEEEcCCCEEECcccccCCCCchHHHHHHHHcCHHH
Confidence 1122233345556 6799999999999999999999999999999999999999999999999965 899999999999
Q ss_pred HHHHHHcCCCcCHHHHHHcCCccEEcCCchHHHHHHHHHHHHHhcCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhC
Q 004972 156 AIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTA 235 (721)
Q Consensus 156 a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (721)
|++|++||++++|+||+++||||+|||++++++++.++|+++++.+|.+
T Consensus 179 A~~llltG~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a------------------------------- 227 (286)
T 3myb_A 179 AFEMLVTGEFVSADDAKGLGLVNRVVAPKALDDEIEAMVSKIVAKPRAA------------------------------- 227 (286)
T ss_dssp HHHHHHHCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHHSCHHH-------------------------------
T ss_pred HHHHHHcCCCCCHHHHHHCCCCcEecCHHHHHHHHHHHHHHHHhCCHHH-------------------------------
Confidence 9999999999999999999999999999999999999999999987642
Q ss_pred CCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcCCC
Q 004972 236 PNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 293 (721)
Q Consensus 236 ~~~~A~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~~~ 293 (721)
...+|++++.....+++++++.|.+.+..++.|+|++|++++|++||+|.+.+
T Consensus 228 -----~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~egi~aFlekr~p~f~g 280 (286)
T 3myb_A 228 -----VAMGKALFYRQIETDIESAYADAGTTMACNMMDPSALEGVSAFLEKRRPEWHT 280 (286)
T ss_dssp -----HHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHTTSCCCCCC
T ss_pred -----HHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHccCCCCCCC
Confidence 33567888888889999999999999999999999999999999999988654
No 21
>3gow_A PAAG, probable enoyl-COA hydratase; the spiral fold, the crotonase superfamily, lyase; 1.85A {Thermus thermophilus HB8} PDB: 3hrx_A
Probab=100.00 E-value=2.3e-49 Score=406.82 Aligned_cols=247 Identities=29% Similarity=0.381 Sum_probs=223.9
Q ss_pred EEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccCCCcccccch
Q 004972 6 VTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPD 84 (721)
Q Consensus 6 v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~ 84 (721)
|.++. +++|++||||||+ .|++|.+|+.+|.++++.+++|+++|+|||||.|+.||+|+|++++... . .....+..
T Consensus 2 v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~-~-~~~~~~~~ 78 (254)
T 3gow_A 2 VLKER-QDGVLVLTLNRPEKLNAITGELLDALYAALKEGEEDREVRALLLTGAGRAFSAGQDLTEFGDR-K-PDYEAHLR 78 (254)
T ss_dssp EEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGTTTS-C-CCHHHHTH
T ss_pred eEEEE-ECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCCCcccCCCChHHHhhc-c-hhHHHHHH
Confidence 67888 7999999999995 7999999999999999999999999999999999999999999998653 1 11222223
Q ss_pred HHHHHHHHHHhhCCCcEEEEECCcccccchHhhhhcCEEEeeCCceEeCcccccCcccc---ccccccccCHHHHHHHHH
Q 004972 85 VSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMML 161 (721)
Q Consensus 85 ~~~~~~~~~l~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~a~~~~pe~~~Gl~P~---~~~l~r~~G~~~a~~l~l 161 (721)
..+.++ ..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|+ +++|+|++|..+|++|++
T Consensus 79 ~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~l~l 157 (254)
T 3gow_A 79 RYNRVV-EALSGLEKPLVVAVNGVAAGAGMSLALWGDLRLAAVGASFTTAFVRIGLVPDSGLSFLLPRLVGLAKAQELLL 157 (254)
T ss_dssp HHHHHH-HHHHTCSSCEEEEECSEEETHHHHHHTTCSEEEEETTCEEECCGGGGTCCCCTTHHHHHHHHHCHHHHHHHHH
T ss_pred HHHHHH-HHHHhCCCCEEEEECCeeehHHHHHHHHCCEEEEcCCCEEeCcccccCCCCCccHHHHHHHHhCHHHHHHHHH
Confidence 345566 6799999999999999999999999999999999999999999999999997 899999999999999999
Q ss_pred cCCCcCHHHHHHcCCccEEcCCchHHHHHHHHHHHHHhcCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCCChhH
Q 004972 162 LSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 241 (721)
Q Consensus 162 tg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~ 241 (721)
||++++|+||+++||||+|||++++++++.++++++++.+|.. .
T Consensus 158 tg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a------------------------------------~ 201 (254)
T 3gow_A 158 LSPRLSAEEALALGLVHRVVPAEKLMEEALSLAKELAQGPTRA------------------------------------Y 201 (254)
T ss_dssp HCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSCHHH------------------------------------H
T ss_pred cCCccCHHHHHHcCCCCEecCHHHHHHHHHHHHHHHHcCCHHH------------------------------------H
Confidence 9999999999999999999999999999999999999988643 3
Q ss_pred HHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcCC
Q 004972 242 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 292 (721)
Q Consensus 242 ~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~~ 292 (721)
..+|++++.+...+++++++.|.+.+..++.|+|++|++++|++||+|.+.
T Consensus 202 ~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~p~f~ 252 (254)
T 3gow_A 202 ALTKKLLLETYRLSLTEALALEAVLQGQAGQTQDHEEGVRAFREKRPPRFQ 252 (254)
T ss_dssp HHHHHHHHHGGGSCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCCCCC
T ss_pred HHHHHHHHHhhhCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCCCC
Confidence 356788999888999999999999999999999999999999999987753
No 22
>3fdu_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2; 2.00A {Acinetobacter baumannii}
Probab=100.00 E-value=2.1e-49 Score=409.37 Aligned_cols=250 Identities=22% Similarity=0.345 Sum_probs=214.7
Q ss_pred CC-CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhh---hccC
Q 004972 1 MA-APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ---KVHG 75 (721)
Q Consensus 1 m~-~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~---~~~~ 75 (721)
|| ++.|.++. +++|++||||||+ .|++|.+|+.+|.+++++++.|+++|+|||||.|++||+|+|++++. ....
T Consensus 1 Ms~~~~v~~~~-~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~ 79 (266)
T 3fdu_A 1 MSLHPHLNANL-EGGVLTLAINRPEAKNALYGELYLWIAKALDEADQNKDVRVVVLRGAEHDFTAGNDMKDFMGFVQNPN 79 (266)
T ss_dssp -CCCTTEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCHHHHHHHHHSCC
T ss_pred CCCCCeEEEEE-ECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCeECCcCHHHHhhhccccc
Confidence 65 67899999 7999999999995 79999999999999999999999999999999999999999999987 3222
Q ss_pred CCcccccchHHHHHHHHHHhhCCCcEEEEECCcccccchHhhhhcCEEEeeCCceEeCcccccCcccc---ccccccccC
Q 004972 76 AGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVG 152 (721)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~l~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~a~~~~pe~~~Gl~P~---~~~l~r~~G 152 (721)
.. .........++ +.+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|+ +++|+|++|
T Consensus 80 ~~--~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG 156 (266)
T 3fdu_A 80 AG--PAGQVPPFVLL-KSAARLSKPLIIAVKGVAIGIGVTILLQADLVFADNTALFQIPFVSLGLSPEGGASQLLVKQAG 156 (266)
T ss_dssp CS--CGGGSHHHHHH-HHHHHCCSCEEEEECSEEETHHHHGGGGCSEEEECTTCEEECCTTTTTCCCCTTHHHHHHHHHC
T ss_pred hh--hHHHHHHHHHH-HHHHhCCCCEEEEECCEEehHHHHHHHhCCEEEEcCCCEEECchhhhCCCCcchHHHHHHHHhC
Confidence 11 12233445666 6799999999999999999999999999999999999999999999999997 899999999
Q ss_pred HHHHHHHHHcCCCcCHHHHHHcCCccEEcCCchHHHHHHHHHHHHHhcCchhhhhhhccCCCCCcHHHHHHHHHHHHHHH
Q 004972 153 LSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAK 232 (721)
Q Consensus 153 ~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (721)
..+|++|++||++++|+||+++||||+||| ++++++.++|++|++.+|.++
T Consensus 157 ~~~A~~l~ltg~~i~A~eA~~~GLv~~vv~--~l~~~a~~~a~~la~~~~~a~--------------------------- 207 (266)
T 3fdu_A 157 YHKAAELLFTAKKFNAETALQAGLVNEIVE--DAYATAQATAQHLTALPLASL--------------------------- 207 (266)
T ss_dssp HHHHHHHHHHCCEECHHHHHHTTSCSEECS--CHHHHHHHHHHHHHTSCHHHH---------------------------
T ss_pred HHHHHHHHHhCCCcCHHHHHHCCCHHHHHH--HHHHHHHHHHHHHHhCCHHHH---------------------------
Confidence 999999999999999999999999999999 899999999999999887533
Q ss_pred HhCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcCCC
Q 004972 233 KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 293 (721)
Q Consensus 233 ~~~~~~~A~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~~~ 293 (721)
..+|++++... .+++++++.|.+.+..++.|+|++|++++|++||+|.+.+
T Consensus 208 ---------~~~K~~l~~~~-~~l~~~l~~e~~~~~~~~~s~d~~eg~~aF~ekR~p~~~~ 258 (266)
T 3fdu_A 208 ---------KQTKALMKHDL-DQIIECIDHEAEIFMQRVQSPEMLEAVQAFMQKRQPDFSQ 258 (266)
T ss_dssp ---------HHHHHHHTTTH-HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHC---------
T ss_pred ---------HHHHHHHHhhh-ccHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCCCCC
Confidence 34566666654 4678999999999999999999999999999999998765
No 23
>3p5m_A Enoyl-COA hydratase/isomerase; seattle structural genomics center for infectious disease, S coenzyme A, tuberculosis; 2.05A {Mycobacterium avium}
Probab=100.00 E-value=3.5e-49 Score=405.42 Aligned_cols=245 Identities=23% Similarity=0.317 Sum_probs=221.8
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccCCCcccc
Q 004972 3 APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSL 81 (721)
Q Consensus 3 ~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~ 81 (721)
++.|.++. +++|++||||||+ .|++|.+|+.+|.+++++++.|+++|+|||||.|++||+|+|++++... .
T Consensus 5 ~~~i~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~-------~ 76 (255)
T 3p5m_A 5 MNGISVEH-DGAVLRIRLDRPEKLNAVDTPMLEELSVHIRDAEADESVRAVLLTGAGRAFCSGGDLTGGDTA-------G 76 (255)
T ss_dssp BTTEEEEE-ETTEEEEEECCGGGTTEECHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCEECC---CHH-------H
T ss_pred CceEEEEE-ECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCCccCCCChhhhcch-------H
Confidence 34689999 7999999999996 6999999999999999999999999999999999999999999988621 2
Q ss_pred cchHHHHHHHHHHhhCCCcEEEEECCcccccchHhhhhcCEEEeeCCceEeCcccccCcccc---ccccccccCHHHHHH
Q 004972 82 MPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIE 158 (721)
Q Consensus 82 ~~~~~~~~~~~~l~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~a~~~~pe~~~Gl~P~---~~~l~r~~G~~~a~~ 158 (721)
+....+.++ +.+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|+ +++|+|++|..+|++
T Consensus 77 ~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~ 155 (255)
T 3p5m_A 77 AADAANRVV-RAITSLPKPVIAGVHGAAVGFGCSLALACDLVVAAPASYFQLAFTRVGLMPDGGASALLPLLIGRARTSR 155 (255)
T ss_dssp HHHHHHHHH-HHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEECTTCEEECGGGGGTCCCCTTHHHHTHHHHCHHHHHH
T ss_pred HHHHHHHHH-HHHHhCCCCEEEEeCCeehhhHHHHHHHCCEEEEcCCcEEeCcccccCcCCCccHHHHHHHHhCHHHHHH
Confidence 233445566 6799999999999999999999999999999999999999999999999997 899999999999999
Q ss_pred HHHcCCCcCHHHHHHcCCccEEcCCchHHHHHHHHHHHHHhcCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCCC
Q 004972 159 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 238 (721)
Q Consensus 159 l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (721)
|++||++++|+||+++||||+|+|++++++++.++|+++++.+|.+
T Consensus 156 l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a---------------------------------- 201 (255)
T 3p5m_A 156 MAMTAEKISAATAFEWGMISHITSADEYESVLTDVLRSVSGGPTLA---------------------------------- 201 (255)
T ss_dssp HHHHCCCEEHHHHHHTTSCSEECCTTCHHHHHHHHHHHHHTSCHHH----------------------------------
T ss_pred HHHcCCCcCHHHHHHCCCCCEeeCHHHHHHHHHHHHHHHHhCCHHH----------------------------------
Confidence 9999999999999999999999999999999999999999988643
Q ss_pred hhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcCC
Q 004972 239 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 292 (721)
Q Consensus 239 ~A~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~~ 292 (721)
...+|++++.....+++++++.|.+.+..++.|+|++|++++|++||+|.+.
T Consensus 202 --~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~p~f~ 253 (255)
T 3p5m_A 202 --FGWTKRALAAATLAELEPVQAIEAEGQLALVETADFREGARAFRERRTPNFR 253 (255)
T ss_dssp --HHHHHHHHHHHHCTTHHHHHHHHHHHHHHHTTSHHHHHHHHHHHTTSCCCCC
T ss_pred --HHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCCCC
Confidence 3356788888888899999999999999999999999999999999987753
No 24
>3swx_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium abscessus}
Probab=100.00 E-value=9.2e-50 Score=412.38 Aligned_cols=253 Identities=24% Similarity=0.330 Sum_probs=223.6
Q ss_pred CC-CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccCCCc
Q 004972 1 MA-APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGD 78 (721)
Q Consensus 1 m~-~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~~ 78 (721)
|+ ++.|.++. +++|++||||||+ .|++|.+|+.+|.+++++++.|+++|+|||||.|+.||+|+|++++........
T Consensus 5 m~~~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~ 83 (265)
T 3swx_A 5 MSDYETLRIRR-DGYVLVIGLNRPAKRNAFDKTMLEELALALGEYETDTDLRAAVLYGEGPLFTAGLDLASVAAEIQGGA 83 (265)
T ss_dssp --CCSSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCHHHHHHHHC--C
T ss_pred CCCCceEEEEE-ECCEEEEEECCCcccCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCCcccCcChHHHhhcccchh
Confidence 55 67899999 7999999999995 699999999999999999999999999999999999999999999875432211
Q ss_pred ccccchHHHHHHHHHH-hhCCCcEEEEECCcccccchHhhhhcCEEEeeCCceEeCcccccCcccc---ccccccccCHH
Q 004972 79 VSLMPDVSVELVVNLI-EDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLS 154 (721)
Q Consensus 79 ~~~~~~~~~~~~~~~l-~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~a~~~~pe~~~Gl~P~---~~~l~r~~G~~ 154 (721)
..+.....+.+ +.+ .++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|+ +++|+|++|..
T Consensus 84 -~~~~~~~~~~~-~~l~~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~ 161 (265)
T 3swx_A 84 -SLTPEGGINPW-QVDGRQLSKPLLVAVHGKVLTLGIELALAADIVIADETATFAQLEVNRGIYPFGGATIRFPRTAGWG 161 (265)
T ss_dssp -CCCCTTCCCTT-CCSSCCCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECGGGGGTSCCCSSHHHHHHHHHCHH
T ss_pred -HHHHHHHHHHH-HHHHHhCCCCEEEEEcCeeehHHHHHHHHCCEEEEcCCCEEECcccccccCCCccHHHHHHHHhhHH
Confidence 11112222334 457 8999999999999999999999999999999999999999999999997 88999999999
Q ss_pred HHHHHHHcCCCcCHHHHHHcCCccEEcCCchHHHHHHHHHHHHHhcCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHh
Q 004972 155 KAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKT 234 (721)
Q Consensus 155 ~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (721)
+|++|++||++++|+||+++||||+|+|++++++++.++|+++++.+|.+
T Consensus 162 ~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a------------------------------ 211 (265)
T 3swx_A 162 NAMRWMLTADTFDAVEAHRIGIVQEIVPVGEHVDTAIAIAQTIARQAPLG------------------------------ 211 (265)
T ss_dssp HHHHHHTTCCCEEHHHHHHTTSCSEEESTTCHHHHHHHHHHHHHHSCHHH------------------------------
T ss_pred HHHHHHHcCCcCCHHHHHHcCCCCEecChhHHHHHHHHHHHHHHcCCHHH------------------------------
Confidence 99999999999999999999999999999999999999999999988643
Q ss_pred CCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcCC
Q 004972 235 APNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 292 (721)
Q Consensus 235 ~~~~~A~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~~ 292 (721)
...+|++++.+...+++++++.|.+.+..++.|+|++|++++|++||+|++.
T Consensus 212 ------~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~s~d~~eg~~af~ekr~p~f~ 263 (265)
T 3swx_A 212 ------VQATLRNARLAVREGDAAAEEQLVPTVRELFTSEDATLGVQAFLSRTTAEFV 263 (265)
T ss_dssp ------HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTCCCCCC
T ss_pred ------HHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHhcCCCCCCC
Confidence 3356778888888899999999999999999999999999999999988753
No 25
>3lke_A Enoyl-COA hydratase; nysgrc, target 112 structural genomics, PSI-2, protein structure initiative; 1.70A {Bacillus halodurans}
Probab=100.00 E-value=1e-49 Score=411.32 Aligned_cols=253 Identities=20% Similarity=0.289 Sum_probs=220.0
Q ss_pred CCCCcEEEEEecCcEEEEEeCCC-CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCC-cCCCCchhhhh--c-cC
Q 004972 1 MAAPRVTMEVGNDGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRF-SGGFDINVFQK--V-HG 75 (721)
Q Consensus 1 m~~~~v~~~~~~~~v~~i~l~~p-~~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F-~aG~Dl~~~~~--~-~~ 75 (721)
||++.|.++. +++|++|||||| +.|++|.+|+.+|.++++.++.|+++|+|||||.|+.| |+|+|++++.. . ..
T Consensus 1 Ms~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FF~aG~Dl~~~~~~~~~~~ 79 (263)
T 3lke_A 1 MSLSYVHTEI-QNDALYITLDYPEKKNGLDAELGTSLLEAIRAGNNETSIHSIILQSKHRAYFSSGPRLEDLLICASDQS 79 (263)
T ss_dssp --CCSEEEEE-CSSEEEEEECCGGGTTBCCHHHHHHHHHHHHHHHHCSSCCEEEEEESCTTEEECBSCHHHHHHHHHCSS
T ss_pred CCCcEEEEEE-ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCceEecCcCHHHHHhhcccCC
Confidence 8999999999 899999999999 68999999999999999999999999999999999999 99999999875 2 11
Q ss_pred CCcccccchHHHHHHHHHHhhCCCcEEEEECCcccccchHhhhhcCEEEeeCCceEeCcccccCcccc---ccccccccC
Q 004972 76 AGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVG 152 (721)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~l~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~a~~~~pe~~~Gl~P~---~~~l~r~~G 152 (721)
......+....++++ ..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|+ +++|+|++|
T Consensus 80 ~~~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~~~vG 158 (263)
T 3lke_A 80 DVRLREVLHVLNHCV-LEIFTSPKVTVALINGYAYGGGFNMMLACDRRIALRRAKFLENFHKMGISPDLGASYFLPRIIG 158 (263)
T ss_dssp SHHHHHHHHHHHHHH-HHHHTCSSEEEEEECSEEETHHHHGGGGSSEEEEETTCEEECCHHHHTCCCCTTHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHH-HHHHhCCCCEEEEECCEeeHHHHHHHHHCCEEEEcCCCEEeCchHhhCCCCCccHHHHHHHHhC
Confidence 111222333444556 6799999999999999999999999999999999999999999999999997 899999999
Q ss_pred HHHHHHHHHcCCCcCHHHHHHcCCccEEcC-CchHHHHHHHHHHHHHhcCchhhhhhhccCCCCCcHHHHHHHHHHHHHH
Q 004972 153 LSKAIEMMLLSKSITSEEGWKLGLIDAVVT-SEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQA 231 (721)
Q Consensus 153 ~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~-~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (721)
..+|++|++||++++|+||+++||||+||| ++++.+++.++|+++++.+|.+
T Consensus 159 ~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~~l~~~a~~~a~~la~~~~~a--------------------------- 211 (263)
T 3lke_A 159 YEQTMNLLLEGKLFTSEEALRLGLIQEICENKQELQERVKNYLKAVSEGYVPA--------------------------- 211 (263)
T ss_dssp HHHHHHHHHHCCCEEHHHHHHHTSSSEEESSHHHHHHHHHHHHHHHHTSCHHH---------------------------
T ss_pred HHHHHHHHHhCCCcCHHHHHHcCCCcEecCChhHHHHHHHHHHHHHHhCCHHH---------------------------
Confidence 999999999999999999999999999999 9999999999999999988643
Q ss_pred HHhCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcC
Q 004972 232 KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 291 (721)
Q Consensus 232 ~~~~~~~~A~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~ 291 (721)
...+|++++.....+++++++.|.+.+..++.|+|+++++++|++++++.+
T Consensus 212 ---------~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~s~d~~e~~~~~~~~~~~~~ 262 (263)
T 3lke_A 212 ---------IAATKKLLKGKAAEELKQQLEQETEELVALFKQTEIKKRLEALVEGHHHHH 262 (263)
T ss_dssp ---------HHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTSHHHHHHHHHC--------
T ss_pred ---------HHHHHHHHHHhhhcCHHHHHHHHHHHHHHHhcCHHHHHHHHhhhccCCCCC
Confidence 335677888887788999999999999999999999999999999998764
No 26
>3g64_A Putative enoyl-COA hydratase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; 2.05A {Streptomyces coelicolor A3}
Probab=100.00 E-value=5.4e-49 Score=409.74 Aligned_cols=253 Identities=25% Similarity=0.362 Sum_probs=227.1
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccCCCcc--
Q 004972 3 APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDV-- 79 (721)
Q Consensus 3 ~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~~~-- 79 (721)
++.|.++. +++|++||||||+ .|++|.+|+++|.++++++++|+++|+|||||.|++||+|+|++++.........
T Consensus 16 ~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~ 94 (279)
T 3g64_A 16 WRHLRVEI-TDGVATVTLARPDKLNALTFEAYADLRDLLAELSRRRAVRALVLAGEGRGFCSGGDVDEIIGATLSMDTAR 94 (279)
T ss_dssp CSSEEEEE-ETTEEEEEESCGGGTTCBCHHHHHHHHHHHHHHHHTTCCSEEEEEECSSCSBCCBCTTTTHHHHTTCCHHH
T ss_pred CCeEEEEE-ECCEEEEEECCCcccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCceecCcCHHHHhhccccchhhH
Confidence 46799999 7999999999995 7999999999999999999999999999999999999999999998764332211
Q ss_pred -cccchHHHHHHHHHHhhCCCcEEEEECCcccccchHhhhhcCEEEeeCCceEeCcccccCcc-cc---ccccccccCHH
Q 004972 80 -SLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVI-PG---TQRLPRLVGLS 154 (721)
Q Consensus 80 -~~~~~~~~~~~~~~l~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~a~~~~pe~~~Gl~-P~---~~~l~r~~G~~ 154 (721)
..+....+.++ +.+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++ |+ +++|+|++|..
T Consensus 95 ~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~~p~~g~~~~l~r~vG~~ 173 (279)
T 3g64_A 95 LLDFNRMTGQVV-RAVRECPFPVIAALHGVAAGAGAVLALAADFRVADPSTRFAFLFTRVGLSGGDMGAAYLLPRVVGLG 173 (279)
T ss_dssp HHHHHHHHHHHH-HHHHHSSSCEEEEECSEEETHHHHHHHHSSEEEECTTCEEECCGGGGTCCSCCTTHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHH-HHHHhCCCCEEEEEcCeeccccHHHHHhCCEEEEeCCCEEeCchhhcCCCCCchhHHHHHHHHhCHH
Confidence 11222334555 67999999999999999999999999999999999999999999999999 86 89999999999
Q ss_pred HHHHHHHcCCCcCHHHHHHcCCccEEcCCchHHHHHHHHHHHHHhcCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHh
Q 004972 155 KAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKT 234 (721)
Q Consensus 155 ~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (721)
+|++|++||++++|+||+++||||+|||++++++++.++|++|++.+|..
T Consensus 174 ~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a------------------------------ 223 (279)
T 3g64_A 174 HATRLLMLGDTVRAPEAERIGLISELTEEGRADEAARTLARRLADGPALA------------------------------ 223 (279)
T ss_dssp HHHHHHHHCCCEEHHHHHHHTCCSEECCTTCHHHHHHHHHHHHHTSCHHH------------------------------
T ss_pred HHHHHHHcCCCcCHHHHHHCCCCCEecCchHHHHHHHHHHHHHHhCCHHH------------------------------
Confidence 99999999999999999999999999999999999999999999988643
Q ss_pred CCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcCCC
Q 004972 235 APNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 293 (721)
Q Consensus 235 ~~~~~A~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~~~ 293 (721)
...+|++++.....+++++++.|.+.+..++.|+|++|++++|++||+|++..
T Consensus 224 ------~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~s~d~~eg~~af~ekr~p~f~g 276 (279)
T 3g64_A 224 ------HAQTKALLTAELDMPLAAAVELDASTQALLMTGEDYAEFHAAFTEKRPPKWQG 276 (279)
T ss_dssp ------HHHHHHHHHHHTTSCHHHHHHHHHHHHHHHTTSHHHHHHHHHHHTTSCCCCCC
T ss_pred ------HHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCCCCCCC
Confidence 33567888888889999999999999999999999999999999999887643
No 27
>3qmj_A Enoyl-COA hydratase, ECHA8_6; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium marinum}
Probab=100.00 E-value=1.4e-49 Score=409.22 Aligned_cols=248 Identities=25% Similarity=0.297 Sum_probs=186.2
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccCCCcccc
Q 004972 3 APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSL 81 (721)
Q Consensus 3 ~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~ 81 (721)
+..|.++. +++|++||||||+ .|++|.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++...........
T Consensus 5 ~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~ 83 (256)
T 3qmj_A 5 MVTLQIDD-DNRVRTLTLNRPEALNAFNEALYDATAQALLDAADDPQVAVVLLTGSGRGFSAGTDLAEMQARITDPNFSE 83 (256)
T ss_dssp -CCEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTEEECCBCHHHHHHHHHSSSCCC
T ss_pred cceEEEEE-ECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCcccCcCHHHHhhcccchhHHH
Confidence 45688999 7999999999996 699999999999999999999999999999999999999999999865432222233
Q ss_pred cchHHHHHHHHHHhhCCCcEEEEECCcccccchHhhhhcCEEEeeCCceEeCcccccCcccc---ccccccccCHHHHHH
Q 004972 82 MPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIE 158 (721)
Q Consensus 82 ~~~~~~~~~~~~l~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~a~~~~pe~~~Gl~P~---~~~l~r~~G~~~a~~ 158 (721)
.....+.++ +.+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|+ +++|+|++|..+|++
T Consensus 84 ~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~ 162 (256)
T 3qmj_A 84 GKFGFRGLI-KALAGFPKPLICAVNGLGVGIGATILGYADLAFMSSTARLKCPFTSLGVAPEAASSYLLPQLVGRQNAAW 162 (256)
T ss_dssp CSSHHHHHH-HHHHHCCSCEEEEECSEEETHHHHGGGGCSEEEEETTCEEECCGGGC---CCTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-HHHHhCCCCEEEEECCeehhHHHHHHHhCCEEEEeCCCEEECcccccCCCCCccHHHHHHHHhCHHHHHH
Confidence 344556666 6799999999999999999999999999999999999999999999999997 899999999999999
Q ss_pred HHHcCCCcCHHHHHHcCCccEEcCCchHHHHHHHHHHHHHhcCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCCC
Q 004972 159 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 238 (721)
Q Consensus 159 l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (721)
|++||++++|+||+++||||+|+|++++.+++.++|+++++.+|.+
T Consensus 163 l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a---------------------------------- 208 (256)
T 3qmj_A 163 LLMSSEWIDAEEALRMGLVWRICSPEELLPEARRHAEILAAKPISS---------------------------------- 208 (256)
T ss_dssp HHHSCCCEEHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSCHHH----------------------------------
T ss_pred HHHcCCCCCHHHHHHCCCccEEeCHhHHHHHHHHHHHHHHhCCHHH----------------------------------
Confidence 9999999999999999999999999999999999999999987643
Q ss_pred hhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhh
Q 004972 239 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRA 288 (721)
Q Consensus 239 ~A~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~ 288 (721)
...+|++++.....+++++++.|.+.+..++.|+|++|++++|++||+
T Consensus 209 --~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~ 256 (256)
T 3qmj_A 209 --LMAVKHTMVEPNRAQIAAASARENAHFAELMGAQANAAALADFTDRRR 256 (256)
T ss_dssp --HHHHHHHHHCC-------------------------------------
T ss_pred --HHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHccCC
Confidence 345678888888888999999999999999999999999999999985
No 28
>3sll_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.35A {Mycobacterium abscessus}
Probab=100.00 E-value=7.4e-49 Score=410.08 Aligned_cols=252 Identities=24% Similarity=0.339 Sum_probs=219.6
Q ss_pred CcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccCCCc----
Q 004972 4 PRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGD---- 78 (721)
Q Consensus 4 ~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~~---- 78 (721)
..|.++. +++|++||||||+ .|+||.+|+.+|.++++.++.|+++|+|||||.|+.||+|+|++++........
T Consensus 24 ~~v~~~~-~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~F~aG~Dl~~~~~~~~~~~~~~~ 102 (290)
T 3sll_A 24 FVLVDRP-RPEIALVTLNRPERMNAMAFDVMLPFKQMLVDISHDNDVRAVVITGAGKGFCSGADQKSAGPIPHIGGLTQP 102 (290)
T ss_dssp CEEEEEE-ETTEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHTCTTCCEEEEEESTTCSBCC------CCCSSCTTCCHH
T ss_pred eEEEEEE-ECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHcCCCeeEEEEECCCCCeeCCcChHHHhcccccccccch
Confidence 4578888 7999999999995 799999999999999999999999999999999999999999999865432211
Q ss_pred --ccccchHHHHHHHHHHhhCCCcEEEEECCcccccchHhhhhcCEEEeeCCceEeCcccccCcccc----ccccccccC
Q 004972 79 --VSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG----TQRLPRLVG 152 (721)
Q Consensus 79 --~~~~~~~~~~~~~~~l~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~a~~~~pe~~~Gl~P~----~~~l~r~~G 152 (721)
...+....+.++ ..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|+ +++|+|++|
T Consensus 103 ~~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~~g~~~~L~r~vG 181 (290)
T 3sll_A 103 TIALRSMELLDEVI-LTLRRMHQPVIAAINGAAIGGGLCLALACDVRVASQDAYFRAAGINNGLTASELGLSYLLPRAIG 181 (290)
T ss_dssp HHHHHHHHHHHHHH-HHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECTTTTTTSCSCCTTHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHH-HHHHhCCCCEEEEECCeehHHHHHHHHHCCEEEEeCCCEEECchhccCcCCCcccHHHHHHHHhC
Confidence 111223344555 6789999999999999999999999999999999999999999999999984 789999999
Q ss_pred HHHHHHHHHcCCCcCHHHHHHcCCccEEcCCchHHHHHHHHHHHHHhcCchhhhhhhccCCCCCcHHHHHHHHHHHHHHH
Q 004972 153 LSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAK 232 (721)
Q Consensus 153 ~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (721)
..+|++|++||++++|+||+++||||+|||++++++++.++|++|++.+|.+
T Consensus 182 ~~~A~~llltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~a~~la~~~~~a---------------------------- 233 (290)
T 3sll_A 182 TSRASDIMLTGRDVDADEAERIGLVSRKVASESLLEECYAIGERIAGFSRPG---------------------------- 233 (290)
T ss_dssp HHHHHHHHHHCCCEEHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHHSCHHH----------------------------
T ss_pred HHHHHHHHHcCCCCCHHHHHHCCCccEEeChhHHHHHHHHHHHHHHcCCHHH----------------------------
Confidence 9999999999999999999999999999999999999999999999988643
Q ss_pred HhCCCChhHHHHHHHHHHhhc-CCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHhhhhcCCC
Q 004972 233 KTAPNMPQHQACLDVIEEGIV-HGGYSGVLKEAKVFKELV-MLDTSRGLVHVFFAQRATSKVP 293 (721)
Q Consensus 233 ~~~~~~~A~~~~~~~i~~~~~-~~~~~~l~~E~~~~~~~~-~s~~~~~~i~aF~~~r~~~~~~ 293 (721)
...+|++++.... .+++++++.|...+..++ .|+|++|++++|++||+|.+.+
T Consensus 234 --------~~~~K~~l~~~~~~~~l~~~l~~e~~~~~~~~~~s~d~~eg~~AFlekR~P~f~g 288 (290)
T 3sll_A 234 --------IELTKRTIWSGLDAASLESHMHQEGLGQLYVRLLTDNFEEATAARKEKRPAEFRD 288 (290)
T ss_dssp --------HHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHTTSCCCCCS
T ss_pred --------HHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHcCCCCCCCC
Confidence 3356788888888 899999999999999999 9999999999999999887643
No 29
>1nzy_A Dehalogenase, 4-chlorobenzoyl coenzyme A dehalogenase; lyase; HET: BCA; 1.80A {Pseudomonas SP} SCOP: c.14.1.3 PDB: 1jxz_A* 1nzy_B*
Probab=100.00 E-value=2.9e-49 Score=409.78 Aligned_cols=254 Identities=24% Similarity=0.334 Sum_probs=225.2
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccC---C
Q 004972 1 MAAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHG---A 76 (721)
Q Consensus 1 m~~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~---~ 76 (721)
|+ +.+.++. +++|++||||||+ .|++|.+|+++|.+++++++.|+++++|||||.|++||+|+|++++..... .
T Consensus 1 m~-~~i~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~ 78 (269)
T 1nzy_A 1 MY-EAIGHRV-EDGVAEITIKLPRHRNALSVKAMQEVTDALNRAEEDDSVGAVMITGAEDAFCAGFYLREIPLDKGVAGV 78 (269)
T ss_dssp CC-SSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGSCSSSHHHHH
T ss_pred CC-ceEEEEE-ECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHhhCCCeeEEEEECCCCCcccCcCHHHHhhcccccCh
Confidence 66 5688998 7899999999995 799999999999999999999999999999999999999999998754210 0
Q ss_pred Ccc-cccchHHHHHHHHHHhhCCCcEEEEECCcccccchHhhhhcCEEEeeCCceEeCcccccCcccc---ccccccccC
Q 004972 77 GDV-SLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVG 152 (721)
Q Consensus 77 ~~~-~~~~~~~~~~~~~~l~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~a~~~~pe~~~Gl~P~---~~~l~r~~G 152 (721)
... ..+....++++ ..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|+ +++|+|++|
T Consensus 79 ~~~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG 157 (269)
T 1nzy_A 79 RDHFRIAALWWHQMI-HKIIRVKRPVLAAINGVAAGGGLGISLASDMAICADSAKFVCAWHTIGIGNDTATSYSLARIVG 157 (269)
T ss_dssp HHHHHHHHHHHHHHH-HHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-HHHHhCCCCEEEEECCeeecHHHHHHHhCCEEEecCCCEEeCcccccCCCCCccHHHHHHHHhh
Confidence 000 11222244555 6689999999999999999999999999999999999999999999999997 789999999
Q ss_pred HHHHHHHHHcCCCcCHHHHHHcCCccEEcCCchHHHHHHHHHHHHHhcCchhhhhhhccCCCCCcHHHHHHHHHHHHHHH
Q 004972 153 LSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAK 232 (721)
Q Consensus 153 ~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (721)
..+|++|++||++++|+||+++||||+|+|++++.+++.++++++++.+|..
T Consensus 158 ~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a---------------------------- 209 (269)
T 1nzy_A 158 MRRAMELMLTNRTLYPEEAKDWGLVSRVYPKDEFREVAWKVARELAAAPTHL---------------------------- 209 (269)
T ss_dssp HHHHHHHHHHCCCBCHHHHHHHTSCSCEECHHHHHHHHHHHHHHHHHSCHHH----------------------------
T ss_pred HHHHHHHHHcCCCCCHHHHHHCCCccEeeCHHHHHHHHHHHHHHHHcCCHHH----------------------------
Confidence 9999999999999999999999999999999999999999999999987642
Q ss_pred HhCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcCCC
Q 004972 233 KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 293 (721)
Q Consensus 233 ~~~~~~~A~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~~~ 293 (721)
...+|++++.+...+++++++.|.+.+..++.|+|++|++++|++||+|++.+
T Consensus 210 --------~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~egi~af~ekr~p~f~~ 262 (269)
T 1nzy_A 210 --------QVMAKERFHAGWMQPVEECTEFEIQNVIASVTHPHFMPCLTRFLDGHRADRPQ 262 (269)
T ss_dssp --------HHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHSTTHHHHHHHHHTTCCTTCCS
T ss_pred --------HHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhcCCCCCCC
Confidence 23567788888888999999999999999999999999999999999888654
No 30
>3rsi_A Putative enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Mycobacterium abscessus}
Probab=100.00 E-value=9.5e-49 Score=404.78 Aligned_cols=250 Identities=26% Similarity=0.367 Sum_probs=217.0
Q ss_pred CC-CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccCCCc
Q 004972 1 MA-APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGD 78 (721)
Q Consensus 1 m~-~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~~ 78 (721)
|+ +++|.++. +++|++||||||+ .|++|.+|+.+|.+++++++.|+++|+|||||.|++||+|+|++ ... ...
T Consensus 5 m~~~~~v~~~~-~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~-~~~--~~~- 79 (265)
T 3rsi_A 5 MSAARELLVER-DGPVVILTMNRPHRRNALSTNMVSQFAAAWDEIDHDDGIRAAILTGAGSAYCVGGDLS-DGW--MVR- 79 (265)
T ss_dssp ----CCEEEEE-ETTEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSEECC-------------
T ss_pred CCCCCcEEEEE-ECCEEEEEEcCcccccCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCcccCcCCC-ccc--ccc-
Confidence 55 57899999 7999999999995 79999999999999999999999999999999999999999998 321 111
Q ss_pred ccccchHHHH-HHHHHH-h--hCCCcEEEEECCcccccchHhhhhcCEEEeeCCceEeCcccccCcccc---cccccccc
Q 004972 79 VSLMPDVSVE-LVVNLI-E--DCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLV 151 (721)
Q Consensus 79 ~~~~~~~~~~-~~~~~l-~--~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~a~~~~pe~~~Gl~P~---~~~l~r~~ 151 (721)
...+...... ++ +.+ . ++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|+ +++|+|++
T Consensus 80 ~~~~~~~~~~~~~-~~l~~~~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~v 158 (265)
T 3rsi_A 80 DGSAPPLDPATIG-KGLLLSHTLTKPLIAAVNGACLGGGCEMLQQTDIRVSDEHATFGLPEVQRGLVPGAGSMVRLKRQI 158 (265)
T ss_dssp -----CCCHHHHH-HHTTSSCCCSSCEEEEECSCEETHHHHHHTTCSEEEEETTCEEECGGGGGTCCCTTTHHHHHHHHS
T ss_pred hHHHHHHhHHHHH-HHHHHhcCCCCCEEEEECCeeeHHHHHHHHHCCEEEecCCCEEECchhccCCCCCccHHHHHHHHh
Confidence 1122222334 55 667 8 999999999999999999999999999999999999999999999997 89999999
Q ss_pred CHHHHHHHHHcCCCcCHHHHHHcCCccEEcCCchHHHHHHHHHHHHHhcCchhhhhhhccCCCCCcHHHHHHHHHHHHHH
Q 004972 152 GLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQA 231 (721)
Q Consensus 152 G~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (721)
|..+|++|++||++++|+||+++||||+|||++++.+++.++|++|++.+|.+
T Consensus 159 G~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a--------------------------- 211 (265)
T 3rsi_A 159 PYTKAMEMILTGEPLTAFEAYHFGLVGHVVPAGTALDKARSLADRIVRNGPLA--------------------------- 211 (265)
T ss_dssp CHHHHHHHHHHCCCEEHHHHHHTTSCSEEESTTCHHHHHHHHHHHHHTSCHHH---------------------------
T ss_pred CHHHHHHHHHcCCCCCHHHHHHCCCccEecChhHHHHHHHHHHHHHHhCCHHH---------------------------
Confidence 99999999999999999999999999999999999999999999999988643
Q ss_pred HHhCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcCC
Q 004972 232 KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 292 (721)
Q Consensus 232 ~~~~~~~~A~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~~ 292 (721)
...+|++++.+...+++++++.|.+.+..++.|+|++|++++|++||+|.+.
T Consensus 212 ---------~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~s~d~~eg~~af~ekr~p~f~ 263 (265)
T 3rsi_A 212 ---------VRNAKEAIVRSGWLAEEDARAIEARLTRPVITSADAREGLAAFKEKREARFT 263 (265)
T ss_dssp ---------HHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHTSCCCCC
T ss_pred ---------HHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHcCCCCCCC
Confidence 3456788888888899999999999999999999999999999999987753
No 31
>2ppy_A Enoyl-COA hydratase; beta-oxidation, fatty acid metabol lyase, structural genomics, NPPSFA; 2.16A {Geobacillus kaustophilus}
Probab=100.00 E-value=1.3e-48 Score=404.12 Aligned_cols=249 Identities=25% Similarity=0.375 Sum_probs=223.8
Q ss_pred CCcEEEEEecCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEe-CCCCCcCCCCchhhhhccCCCcccc
Q 004972 3 APRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTG-NGGRFSGGFDINVFQKVHGAGDVSL 81 (721)
Q Consensus 3 ~~~v~~~~~~~~v~~i~l~~p~~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg-~g~~F~aG~Dl~~~~~~~~~~~~~~ 81 (721)
++.+.++. +++|++||||||+.|++|.+|+++|.+++++++.|+++++||||| .|++||+|+|++++.. . ......
T Consensus 8 ~~~i~~~~-~~~v~~itlnrp~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~~g~~F~aG~Dl~~~~~-~-~~~~~~ 84 (265)
T 2ppy_A 8 KQYLTVFK-EDGIAEIHLHINKSNSYDLEFYKEFNAAIDDIRFDPDIKVVIVMSDVPKFFSAGADINFLRS-A-DPRFKT 84 (265)
T ss_dssp CSSEEEEE-ETTEEEEEECSSTTCCBCHHHHHHHHHHHHHHHTCTTCCEEEEEECSTTEEECCBCHHHHTT-S-CHHHHH
T ss_pred CCeEEEEe-eCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEEcCCCCeeeeCcCHHHHhc-c-chhHHH
Confidence 45788998 789999999999779999999999999999999999999999999 9999999999999864 1 111112
Q ss_pred cchHH-HHHHHHHHhhCCCcEEEEECCcccccchHhhhhcCEEEeeCCc-eEeCcccccCcccc---ccccccccCHHHH
Q 004972 82 MPDVS-VELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKT-QLGLPELTLGVIPG---TQRLPRLVGLSKA 156 (721)
Q Consensus 82 ~~~~~-~~~~~~~l~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~a-~~~~pe~~~Gl~P~---~~~l~r~~G~~~a 156 (721)
+...+ ++++ ..+.++||||||+|||+|+|||++|+++||+||+++++ +|++||+++|++|+ +++|+|++|..+|
T Consensus 85 ~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~ag~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a 163 (265)
T 2ppy_A 85 QFCLFCNETL-DKIARSPQVYIACLEGHTVGGGLEMALACDLRFMGDEAGKIGLPEVSLGVLAGTGGTQRLARLIGYSRA 163 (265)
T ss_dssp HHHHHHHHHH-HHHHHSSSEEEEEECSEEETHHHHHHHTSSEEEEETTCCCEECCGGGGTCCCTTTHHHHHHHHHCHHHH
T ss_pred HHHHHHHHHH-HHHHcCCCCEEEEECCEEeeHHHHHHHhCCEEEEeCCCCEEECcccccCCCCCchHHHHHHHHhCHHHH
Confidence 22233 4556 67999999999999999999999999999999999999 99999999999997 8999999999999
Q ss_pred HHHHHcCCCcCHHHHHHcCCccEEcCCchHHHHHHHHHHHHHhcCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCC
Q 004972 157 IEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAP 236 (721)
Q Consensus 157 ~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (721)
++|++||++++|+||+++||||+|+|++++++++.++++++++.+|.
T Consensus 164 ~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~--------------------------------- 210 (265)
T 2ppy_A 164 LDMNITGETITPQEALEIGLVNRVFPQAETRERTREYARKLANSATY--------------------------------- 210 (265)
T ss_dssp HHHHHHCCCBCHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSCHH---------------------------------
T ss_pred HHHHHhCCccCHHHHHHCCCcceecCHHHHHHHHHHHHHHHHhCCHH---------------------------------
Confidence 99999999999999999999999999999999999999999998764
Q ss_pred CChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcC
Q 004972 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 291 (721)
Q Consensus 237 ~~~A~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~ 291 (721)
++..+|++++.+...+++++++.|.+.+..++.|+|++|++++|++||+|.+
T Consensus 211 ---a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~egi~af~ekr~p~~ 262 (265)
T 2ppy_A 211 ---AVSNIKLAIMNGKEMPLNVAIRYEGELQNLLFRSEDAKEGLSAFLEKRQPNW 262 (265)
T ss_dssp ---HHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCCCC
T ss_pred ---HHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCCC
Confidence 2335678888888889999999999999999999999999999999988775
No 32
>3qxz_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.35A {Mycobacterium abscessus} SCOP: c.14.1.0
Probab=100.00 E-value=1.6e-49 Score=410.31 Aligned_cols=251 Identities=24% Similarity=0.340 Sum_probs=223.7
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccCCCcccc
Q 004972 3 APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSL 81 (721)
Q Consensus 3 ~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~ 81 (721)
++.|.++. +++|++||||||+ .|++|.+|+++|.++++.+++|+++++|||||.|++||+|+|++++...........
T Consensus 6 ~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~ 84 (265)
T 3qxz_A 6 VTELHEEI-RDGVAVLTLHGPSTRNSFTVELGRQLGAAYQRLDDDPAVRVIVLTGAPPAFCSGAQISAAAETFAAPRNPD 84 (265)
T ss_dssp CCEEEEEE-ETTEEEEEEECGGGTSCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTEEECCBCSTTCTTCCCCCCSSC
T ss_pred cceEEEEE-ECCEEEEEEcCCccCCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCccccCcChHHHhhccchhHHHH
Confidence 36788999 7999999999995 699999999999999999999999999999999999999999999865432221111
Q ss_pred cchHHHHHHHHHHhhCCCcEEEEECCcccccchHhhhhcCEEEeeCCceEeCcccccCcccc---ccccccccCHHHHHH
Q 004972 82 MPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIE 158 (721)
Q Consensus 82 ~~~~~~~~~~~~l~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~a~~~~pe~~~Gl~P~---~~~l~r~~G~~~a~~ 158 (721)
+ .. +.++ ..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|+ +++|+|++|..+|++
T Consensus 85 ~-~~-~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~ 161 (265)
T 3qxz_A 85 F-SA-SPVQ-PAAFELRTPVIAAVNGHAIGIGMTLALHADIRILAEEGRYAIPQVRFGVAPDALAHWTLPRLVGTAVAAE 161 (265)
T ss_dssp C-CS-CCSS-SCGGGSSSCEEEEECSEEETHHHHHHTTSSEEEEETTCCEECCGGGGTSCCCTTHHHHTHHHHHHHHHHH
T ss_pred H-HH-HHHH-HHHHhCCCCEEEEECCEEehHhHHHHHHCCEEEEcCCCEEECcccccCcCCCccHHHHHHHHhCHHHHHH
Confidence 1 12 3444 5588999999999999999999999999999999999999999999999997 889999999999999
Q ss_pred HHHcCCCcCHHHHHHcCCccEEcCCchHHHHHHHHHHHHHhc-CchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCC
Q 004972 159 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAAR-RKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 237 (721)
Q Consensus 159 l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (721)
|++||++++|+||+++||||+|||++++++++.++|+++++. +|..
T Consensus 162 l~ltg~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~p~a--------------------------------- 208 (265)
T 3qxz_A 162 LLLTGASFSAQRAVETGLANRCLPAGKVLGAALRMAHDIATNVAPES--------------------------------- 208 (265)
T ss_dssp HHHHCCCBCHHHHHHHTSCSEEECHHHHHHHHHHHHHHHHHHSCHHH---------------------------------
T ss_pred HHHcCCCcCHHHHHHCCCccEeeCHHHHHHHHHHHHHHHHccCCHHH---------------------------------
Confidence 999999999999999999999999999999999999999998 7643
Q ss_pred ChhHHHHHHHHHHhhcCCHHHH--HHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcCCC
Q 004972 238 MPQHQACLDVIEEGIVHGGYSG--VLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 293 (721)
Q Consensus 238 ~~A~~~~~~~i~~~~~~~~~~~--l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~~~ 293 (721)
...+|++++.....+++++ ++.|.+.+..++.|+|++|++++|++||+|.+.+
T Consensus 209 ---~~~~K~~l~~~~~~~l~~~~~l~~e~~~~~~~~~s~d~~egi~Af~ekr~P~f~g 263 (265)
T 3qxz_A 209 ---AALTKRLLWDAQMTGMSAAEVAARETADHLRLMGSQDAAEGPRAFIDGRPPRWAG 263 (265)
T ss_dssp ---HHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHTSTHHHHHHHHHHHTSCCCCCC
T ss_pred ---HHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHcCCCCCCCC
Confidence 3356778888877788888 9999999999999999999999999999987643
No 33
>3tlf_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, otholog; 2.15A {Mycobacterium avium subsp} SCOP: c.14.1.0
Probab=100.00 E-value=5e-49 Score=409.16 Aligned_cols=251 Identities=22% Similarity=0.305 Sum_probs=217.9
Q ss_pred CcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccC-----C-
Q 004972 4 PRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHG-----A- 76 (721)
Q Consensus 4 ~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~-----~- 76 (721)
+.|.++. +++|++||||||+ .|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++..... .
T Consensus 11 ~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~ 89 (274)
T 3tlf_A 11 DTIKYEV-DGHTATITLNRPDALNALSPHMITELRAAYHEAENDDRVWLLVVTGTGRAFCSGADVKEIPEDGKVIYERPY 89 (274)
T ss_dssp SSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTEEECCBC--------------CT
T ss_pred CceEEEE-ECCEEEEEECCccccCCCCHHHHHHHHHHHHHHhcCCCeEEEEEeCCCCCcccCcCHHHHhhccccccccch
Confidence 4799999 7999999999996 799999999999999999999999999999999999999999999865332 0
Q ss_pred CcccccchHHHHHHHHHHhhCCCcEEEEECCcccccchHhhhhcCEEEeeCCceEeCcccccCcccc--ccccccccCHH
Q 004972 77 GDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG--TQRLPRLVGLS 154 (721)
Q Consensus 77 ~~~~~~~~~~~~~~~~~l~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~a~~~~pe~~~Gl~P~--~~~l~r~~G~~ 154 (721)
..........+.++ ..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|+ +++|+|++|..
T Consensus 90 ~~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~g~~~~L~r~vG~~ 168 (274)
T 3tlf_A 90 LSTYDQWEAPQEGT-PPFRTMAKPVLTAVNGICCGAGMDWVTTTDIVIASEQATFFDPHVSIGLVAGRELVRVSRVLPRS 168 (274)
T ss_dssp TCSGGGGSCCCTTC-CCTTSCCSCEEEEECSEEEGGGHHHHHHSSEEEEETTCEEECCGGGGTCCCCHHHHHHTTTSCHH
T ss_pred hhHHHHHHHHHHHH-HHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCCEEECcccccCcccchHHHHHHHHhCHH
Confidence 00111111222344 5588999999999999999999999999999999999999999999999996 89999999999
Q ss_pred HHHHHHHcCC--CcCHHHHHHcCCccEEcCCchHHHHHHHHHHHHHhcCchhhhhhhccCCCCCcHHHHHHHHHHHHHHH
Q 004972 155 KAIEMMLLSK--SITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAK 232 (721)
Q Consensus 155 ~a~~l~ltg~--~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (721)
+|++|++||+ +++|+||+++||||+|+|++++++++.++|++|++.+|.
T Consensus 169 ~A~~l~ltg~~~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~----------------------------- 219 (274)
T 3tlf_A 169 IALRMALMGKHERMSAQRAYELGLISEIVEHDRLLERAHEIADIVNSNAPL----------------------------- 219 (274)
T ss_dssp HHHHHHHHGGGCCEEHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSCHH-----------------------------
T ss_pred HHHHHHHcCCCCccCHHHHHHCCCCCeecCHHHHHHHHHHHHHHHHhCCHH-----------------------------
Confidence 9999999999 999999999999999999999999999999999998864
Q ss_pred HhCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcCC
Q 004972 233 KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 292 (721)
Q Consensus 233 ~~~~~~~A~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~~ 292 (721)
|...+|++++.+...+++++++.|.+.+..++.|+|++|++++|++||+|.+.
T Consensus 220 -------a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~p~f~ 272 (274)
T 3tlf_A 220 -------AVRGTRLAILKGLNVPLHEAEILAETFRERVLRTEDAAEGPRAFVEKRQPNWQ 272 (274)
T ss_dssp -------HHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCCCCC
T ss_pred -------HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCCCCCC
Confidence 33456788999888999999999999999999999999999999999987753
No 34
>2ej5_A Enoyl-COA hydratase subunit II; structural genomics, GK2038, NPPSFA, national project on prote structural and functional analyses; 2.00A {Geobacillus kaustophilus}
Probab=100.00 E-value=1e-48 Score=403.02 Aligned_cols=247 Identities=26% Similarity=0.363 Sum_probs=218.2
Q ss_pred CcEEEEEecCcEEEEEeCCC-CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccCCCccccc
Q 004972 4 PRVTMEVGNDGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLM 82 (721)
Q Consensus 4 ~~v~~~~~~~~v~~i~l~~p-~~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~ 82 (721)
+.+.++. +++|++|||||| +.|++|.+|+++|.+++++++.|+++++|||||.|++||+|+|++++...... ..+
T Consensus 3 ~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~---~~~ 78 (257)
T 2ej5_A 3 ETIRYEV-KGQVAWLTLNRPDQLNAFTEQMNAEVTKALKQAGADPNVRCVVITGAGRAFCAGEDLSGVTEEMDH---GDV 78 (257)
T ss_dssp SSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCC-------CH---HHH
T ss_pred CceEEEe-ECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCCccCCcCHHHHhhccch---hHH
Confidence 6789998 789999999999 58999999999999999999999999999999999999999999988542211 111
Q ss_pred ch-HHHHHHHHHHhhCCCcEEEEECCcccccchHhhhhcCEEEeeCCceEeCcccccCcccc---ccccccccCHHHHHH
Q 004972 83 PD-VSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIE 158 (721)
Q Consensus 83 ~~-~~~~~~~~~l~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~a~~~~pe~~~Gl~P~---~~~l~r~~G~~~a~~ 158 (721)
.. ..++++ ..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|+ +++|+|++|..+|++
T Consensus 79 ~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~ 157 (257)
T 2ej5_A 79 LRSRYAPMM-KALHHLEKPVVAAVNGAAAGAGMSLALACDFRLLSEKASFAPAFIHVGLVPDAGHLYYLPRLVGRAKALE 157 (257)
T ss_dssp HHHTHHHHH-HHHHHCCSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCTTHHHHHHHHHCHHHHHH
T ss_pred HHHHHHHHH-HHHHhCCCCEEEEECccccchhHHHHHhCCEEEEcCCCEEeCcccccCCCCcchHHHHHHHHhCHHHHHH
Confidence 11 134555 6689999999999999999999999999999999999999999999999997 889999999999999
Q ss_pred HHHcCCCcCHHHHHHcCCccEEcCCchHHHHHHHHHHHHHhcCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCCC
Q 004972 159 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 238 (721)
Q Consensus 159 l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (721)
|++||++++|+||+++||||+|+|++++++++.++++++++.+|..
T Consensus 158 l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a---------------------------------- 203 (257)
T 2ej5_A 158 LAVLGEKVTAEEAAALGLATKVIPLSDWEEEVKQFAERLSAMPTKA---------------------------------- 203 (257)
T ss_dssp HHHHCCCEEHHHHHHHTCCSEEECGGGHHHHHHHHHHHHHTSCHHH----------------------------------
T ss_pred HHHhCCccCHHHHHHcCCcceecChhHHHHHHHHHHHHHHhCCHHH----------------------------------
Confidence 9999999999999999999999999999999999999999987642
Q ss_pred hhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcC
Q 004972 239 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 291 (721)
Q Consensus 239 ~A~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~ 291 (721)
...+|++++.+...+++++++.|.+.+..++.|+|++|++++|++||+|.+
T Consensus 204 --~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~p~~ 254 (257)
T 2ej5_A 204 --IGLIKRLLRESEETTFDRYLEREAECQRIAGLTSDHREGVKAFFEKRKPLF 254 (257)
T ss_dssp --HHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSHHHHHHHHHHTTTCCCCC
T ss_pred --HHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCChHHHHHHHHHhcCCCCCC
Confidence 235677888888889999999999999999999999999999999988765
No 35
>2pbp_A Enoyl-COA hydratase subunit I; B-oxidation, structural genomics, NPPSFA, nationa on protein structural and functional analyses; 1.80A {Geobacillus kaustophilus} PDB: 2qq3_A
Probab=100.00 E-value=1.2e-48 Score=402.66 Aligned_cols=250 Identities=30% Similarity=0.447 Sum_probs=221.9
Q ss_pred CC-CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccCCCc
Q 004972 1 MA-APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGD 78 (721)
Q Consensus 1 m~-~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~~ 78 (721)
|+ +..+.++. +++|++||||||+ .|++|.+|+++|.+++++++.|+++++|||||.|++||+|+|++++......
T Consensus 1 m~~~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~-- 77 (258)
T 2pbp_A 1 MSEFVSIAARQ-EGAVGIIELARPDVLNALSRQMVAEIVAAVEAFDRNEKVRVIVLTGRGRAFAAGADIQEMAKDDPI-- 77 (258)
T ss_dssp ---CCSEEEEE-ETTEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTEEECCCCHHHHHTCCHH--
T ss_pred CCCcceEEEEe-eCCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCCccCCcCHHHHhcccch--
Confidence 65 45788888 7899999999995 7999999999999999999999999999999999999999999988642110
Q ss_pred ccccchHHHHHHHHHHhhCCCcEEEEECCcccccchHhhhhcCEEEeeCCceEeCcccccCcccc---ccccccccCHHH
Q 004972 79 VSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSK 155 (721)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~a~~~~pe~~~Gl~P~---~~~l~r~~G~~~ 155 (721)
...+...+ +.+ ..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|+ +++|+|++|..+
T Consensus 78 ~~~~~~~~-~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~ 155 (258)
T 2pbp_A 78 RLEWLNQF-ADW-DRLSIVKTPMIAAVNGLALGGGFELALSCDLIVASSAAEFGFPEVNLGVMPGAGGTQRLTKLIGPKR 155 (258)
T ss_dssp HHHHHCTT-HHH-HHHHTCCSCEEEEECSEEETHHHHHHHTSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHHCHHH
T ss_pred hHHHHHHH-HHH-HHHHhCCCCEEEEEcCEEEhHHHHHHHhCCEEEEcCCCEEECcccccCCCCcccHHHHHHHHhCHHH
Confidence 01111112 445 5688999999999999999999999999999999999999999999999997 899999999999
Q ss_pred HHHHHHcCCCcCHHHHHHcCCccEEcCCchHHHHHHHHHHHHHhcCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhC
Q 004972 156 AIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTA 235 (721)
Q Consensus 156 a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (721)
|++|++||++++|+||+++||||+|+|++++++++.++++++++.+|.+
T Consensus 156 a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a------------------------------- 204 (258)
T 2pbp_A 156 ALEWLWTGARMSAKEAEQLGIVNRVVSPELLMEETMRLAGRLAEQPPLA------------------------------- 204 (258)
T ss_dssp HHHHHHHCCCEEHHHHHHTTSCSEEECGGGHHHHHHHHHHHHHTSCHHH-------------------------------
T ss_pred HHHHHHcCCccCHHHHHHcCCcceeeChHHHHHHHHHHHHHHHhCCHHH-------------------------------
Confidence 9999999999999999999999999999999999999999999987642
Q ss_pred CCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcC
Q 004972 236 PNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 291 (721)
Q Consensus 236 ~~~~A~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~ 291 (721)
...+|++++.+...+++++++.|.+.+..++.|+|++|++++|++||+|++
T Consensus 205 -----~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~p~~ 255 (258)
T 2pbp_A 205 -----LRLIKEAVQKAVDYPLYEGMQFERKNFYLLFASEDQKEGMAAFLEKRKPRF 255 (258)
T ss_dssp -----HHHHHHHHHHHHHSCHHHHHHHHHHHHHHHTTSHHHHHHHHHHHTTSCCCC
T ss_pred -----HHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHccCCCCC
Confidence 335678888888889999999999999999999999999999999998764
No 36
>3hp0_A Putative polyketide biosynthesis enoyl-COA hydratase homolog PKSH; polyketide synthase, enoyl COA hydratase,isomerase; 2.32A {Bacillus subtilis}
Probab=100.00 E-value=1.1e-48 Score=403.69 Aligned_cols=251 Identities=18% Similarity=0.178 Sum_probs=215.7
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccC-CCc
Q 004972 1 MAAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHG-AGD 78 (721)
Q Consensus 1 m~~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~-~~~ 78 (721)
|+++.|.++. +++|++||||||+ .|++|.+|+.+|.+++++++.| ++|+|||||.|++||+|+|++++..... ...
T Consensus 4 m~~~~i~~~~-~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d-~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~ 81 (267)
T 3hp0_A 4 VTYQTIKVRF-QASVCYITFHRPEANNTINDTLIEECLQVLNQCETS-TVTVVVLEGLPEVFCFGADFQEIYQEMKRGRK 81 (267)
T ss_dssp -CCSSEEEEE-ETTEEEEEECCGGGTTCBCSHHHHHHHHHHHHHHHS-SCCEEEEECCSSCSBCCBCHHHHHHTTTTTCC
T ss_pred CCCceEEEEE-ECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHhcC-CCEEEEEECCCCceecCcCHHHHHhcccChHH
Confidence 6778899999 7999999999996 6999999999999999999986 6999999999999999999999876421 112
Q ss_pred ccccchHHHHHHHHHHhhCCCcEEEEECCcccccchHhhhhcCEEEeeCCceEeCcccccCcccc--ccccccccCHHHH
Q 004972 79 VSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG--TQRLPRLVGLSKA 156 (721)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~a~~~~pe~~~Gl~P~--~~~l~r~~G~~~a 156 (721)
..........++ ..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|+ +++|+|++|..+|
T Consensus 82 ~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~l~r~vG~~~A 160 (267)
T 3hp0_A 82 QASSQEPLYDLW-MKLQTGPYVTISHVRGKVNAGGLGFVSATDIAIADQTASFSLSELLFGLYPACVLPFLIRRIGRQKA 160 (267)
T ss_dssp SCCCCHHHHHHH-HHHHHSSSEEEEEECSEEETTHHHHHHHSSEEEECTTCEEECCGGGGTCCCTTTHHHHHHHHCHHHH
T ss_pred HHHHHHHHHHHH-HHHHcCCCCEEEEECCEEeehHHHHHHhCCEEEEcCCCEEECchhccCcCchhHHHHHHHHhCHHHH
Confidence 233444555666 6799999999999999999999999999999999999999999999999998 7899999999999
Q ss_pred HHHHHcCCCcCHHHHHHcCCccEEcCCchHHHHHHHHHHHHHhcCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCC
Q 004972 157 IEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAP 236 (721)
Q Consensus 157 ~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (721)
++|++||++++|+||+++||||+|+|+.+ ..+.++++++++.+|.+
T Consensus 161 ~ellltg~~i~A~eA~~~GLV~~vv~~~~--~~~~~~a~~la~~~p~a-------------------------------- 206 (267)
T 3hp0_A 161 HYMTLMTKPISVQEASEWGLIDAFDAESD--VLLRKHLLRLRRLNKKG-------------------------------- 206 (267)
T ss_dssp HHHHHHCCCBCHHHHHHHTSSSCBCSCTT--HHHHHHHHHHTTSCHHH--------------------------------
T ss_pred HHHHHcCCCCCHHHHHHCCCcceecCCHH--HHHHHHHHHHHhCCHHH--------------------------------
Confidence 99999999999999999999999998654 34678999999987643
Q ss_pred CChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcCCC
Q 004972 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 293 (721)
Q Consensus 237 ~~~A~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~~~ 293 (721)
...+|++++... ....++++.|.+.+..++.|+|++|++++|++||+|++.+
T Consensus 207 ----~~~~K~~l~~~~-~~~~~~~~~e~~~~~~~~~s~d~~Eg~~AF~ekr~P~~~~ 258 (267)
T 3hp0_A 207 ----IAHYKQFMSSLD-HQVSRAKATALTANQDMFSDPQNQMGIIRYVETGQFPWED 258 (267)
T ss_dssp ----HHHHHHHHHHHC-CHHHHHHHHHHHHHHHHTTSTTHHHHHHHHTTSCCC----
T ss_pred ----HHHHHHHHHhcc-cchHHHHHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCCC
Confidence 234566776653 3467888899999999999999999999999999999765
No 37
>3gkb_A Putative enoyl-COA hydratase; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Streptomyces avermitilis}
Probab=100.00 E-value=6e-49 Score=409.45 Aligned_cols=245 Identities=25% Similarity=0.329 Sum_probs=217.0
Q ss_pred CCcEEEEEecCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCC-CCCcCCCCchhhhhccC----CC
Q 004972 3 APRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNG-GRFSGGFDINVFQKVHG----AG 77 (721)
Q Consensus 3 ~~~v~~~~~~~~v~~i~l~~p~~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g-~~F~aG~Dl~~~~~~~~----~~ 77 (721)
++.|.+++ +++|++||||||+.|+||.+|+.+|.+++++++.|+++|+|||||.| ++||+|+|++++..... ..
T Consensus 8 ~~~i~~~~-~~~va~itlnrP~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~FcaG~Dl~~~~~~~~~~~~~~ 86 (287)
T 3gkb_A 8 YSTLRVSS-EHGVARIILDNPPVNVIGATMMRELRTVLTTLADDSSVRVIVFSSADPEFFLAHVDMRIGEKMDALQELAA 86 (287)
T ss_dssp CSSEEEEE-ETTEEEEEECCTTTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESSSSEEECCBCTTGGGSHHHHHHHHH
T ss_pred CCeEEEEE-ECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHcCCCeeEEEEecCCCCceeCCcCHHHHhhccccchhhH
Confidence 67899999 79999999999999999999999999999999999999999999998 78999999998863210 00
Q ss_pred cccccchHHHHHHHHHHhhCCCcEEEEECCcccccchHhhhhcCEEEeeC-CceEeCcccccCcccc---ccccccccCH
Q 004972 78 DVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-KTQLGLPELTLGVIPG---TQRLPRLVGL 153 (721)
Q Consensus 78 ~~~~~~~~~~~~~~~~l~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~-~a~~~~pe~~~Gl~P~---~~~l~r~~G~ 153 (721)
.........+.++ ..+.++||||||+|||+|+|||++|+++||+|||++ +++|++||+++|++|+ +++|+|++|.
T Consensus 87 ~~~~~~~~~~~~~-~~l~~~~kPvIAaV~G~a~GgG~~lalacD~ria~~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~ 165 (287)
T 3gkb_A 87 SAPADVNVFQAVG-ELIRHQPQVTIVKLAGKARGGGAEFVAAADMAFAAAETAGLGQIEALMGIIPGGGGTQYLRGRVGR 165 (287)
T ss_dssp TSCTTCCTTHHHH-HHHHHCSSEEEEEECSEEETHHHHHHHHSSEEEEETTTCEEECGGGGGTSCCCSSHHHHHHHHHCH
T ss_pred HHHHHHHHHHHHH-HHHHhCCCCEEEEECCeeehHHHHHHHHCCEEEEeCCCcEEECcccccCCCCCchHHHHHHHHhCH
Confidence 1112223344666 679999999999999999999999999999999999 9999999999999997 8999999999
Q ss_pred HHHHHHHHcCCCcCHHHHHHcCCccEEcCCchHHHHHHHHHHHHHhcCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHH
Q 004972 154 SKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKK 233 (721)
Q Consensus 154 ~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (721)
.+|++|++||++++|+||+++||||+|||++++++++.++|++|++.+|.++
T Consensus 166 ~~A~ellltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~lA~~la~~~p~a~---------------------------- 217 (287)
T 3gkb_A 166 NRALEVVLTADLFDAETAASYGWINRALPADELDEYVDRVARNIAALPDGVI---------------------------- 217 (287)
T ss_dssp HHHHHHHHHCCCEEHHHHHHHTSSSEEECHHHHHHHHHHHHHHHHTSCTTHH----------------------------
T ss_pred HHHHHHHHcCCCCCHHHHHHCCCCcEEeChhHHHHHHHHHHHHHHcCCHHHH----------------------------
Confidence 9999999999999999999999999999999999999999999999887533
Q ss_pred hCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhh
Q 004972 234 TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRA 288 (721)
Q Consensus 234 ~~~~~~A~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~ 288 (721)
..+|++++.. ...++++.|.+.+..++.|+|++|++++|++||+
T Consensus 218 --------~~~K~~l~~~---~~~~~l~~e~~~~~~~~~s~d~~eg~~AF~ekr~ 261 (287)
T 3gkb_A 218 --------EAAKRSLPAD---DLKEGLLGENDAWAATFSLPAAQQLISGGLKDGA 261 (287)
T ss_dssp --------HHHHHHSCCC---CCHHHHHHHHHHHHHHHTSHHHHHHHHHHHHTTT
T ss_pred --------HHHHHHHHcc---CHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhcCC
Confidence 2445666553 3468999999999999999999999999999987
No 38
>1ef8_A Methylmalonyl COA decarboxylase; lyase; 1.85A {Escherichia coli} SCOP: c.14.1.3 PDB: 1ef9_A*
Probab=100.00 E-value=1.6e-48 Score=402.52 Aligned_cols=250 Identities=21% Similarity=0.264 Sum_probs=223.1
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEe-CC-CCCcCCCCchhhhhccCCC
Q 004972 1 MAAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTG-NG-GRFSGGFDINVFQKVHGAG 77 (721)
Q Consensus 1 m~~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg-~g-~~F~aG~Dl~~~~~~~~~~ 77 (721)
|+++.+.++. +++|++||||||+ .|++|.+|+++|.+++++++.|+ +++||||| .| +.||+|+|++++.......
T Consensus 1 m~~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~-vr~vVltg~~g~~~F~aG~Dl~~~~~~~~~~ 78 (261)
T 1ef8_A 1 MSYQYVNVVT-INKVAVIEFNYGRKLNALSKVFIDDLMQALSDLNRPE-IRCIILRAPSGSKVFSAGHDIHELPSGGRDP 78 (261)
T ss_dssp CCCSSEEEEE-ETTEEEEEECCGGGTTCCCHHHHHHHHHHHHHTCSTT-CCEEEEECCTTCSEEECCSCSTTC-----CT
T ss_pred CCcceEEEEE-eCCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCC-ceEEEEECCCCCCeeecCcChHhhhccCchh
Confidence 8899999999 7899999999995 79999999999999999999999 99999999 98 9999999999886432111
Q ss_pred cccccchHHHHHHHHHHhhCCCcEEEEECCcccccchHhhhhcCEEEeeCCceEeCcccccCcccc---ccccccccCHH
Q 004972 78 DVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLS 154 (721)
Q Consensus 78 ~~~~~~~~~~~~~~~~l~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~a~~~~pe~~~Gl~P~---~~~l~r~~G~~ 154 (721)
. ......++++ ..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|+ +++|+|++|..
T Consensus 79 -~-~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~ 155 (261)
T 1ef8_A 79 -L-SYDDPLRQIT-RMIQKFPKPIISMVEGSVWGGAFEMIMSSDLIIAASTSTFSMTPVNLGVPYNLVGIHNLTRDAGFH 155 (261)
T ss_dssp -T-CTTSHHHHHH-HHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCHHHHHTTSSSSCHH
T ss_pred -H-HHHHHHHHHH-HHHHhCCCCEEEEECCEEEeHhHHHHHhCCEEEecCCCEEeCchhccCCCCCccHHHHHHHHhCHH
Confidence 1 1222345666 6689999999999999999999999999999999999999999999999997 89999999999
Q ss_pred HHHHHHHcCCCcCHHHHHHcCCccEEcCCchHHHHHHHHHHHHHhcCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHh
Q 004972 155 KAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKT 234 (721)
Q Consensus 155 ~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (721)
+|++|++||++++|+||+++||||+|+|++++++++.++++++++.+|..
T Consensus 156 ~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a------------------------------ 205 (261)
T 1ef8_A 156 IVKELIFTASPITAQRALAVGILNHVVEVEELEDFTLQMAHHISEKAPLA------------------------------ 205 (261)
T ss_dssp HHHHHHHHCCCEEHHHHHHTTSCSEEECHHHHHHHHHHHHHHHTTSCHHH------------------------------
T ss_pred HHHHHHHcCCccCHHHHHHCCCcccccCHHHHHHHHHHHHHHHHhCCHHH------------------------------
Confidence 99999999999999999999999999999999999999999999987642
Q ss_pred CCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHH--HHhCCHHHHHHHHHHHHhhhhcC
Q 004972 235 APNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFK--ELVMLDTSRGLVHVFFAQRATSK 291 (721)
Q Consensus 235 ~~~~~A~~~~~~~i~~~~~~~~~~~l~~E~~~~~--~~~~s~~~~~~i~aF~~~r~~~~ 291 (721)
...+|++++.+...+++++++.|.+.+. .++.|+|+++++++|++||+|.+
T Consensus 206 ------~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~s~d~~eg~~af~ekr~p~~ 258 (261)
T 1ef8_A 206 ------IAVIKEELRVLGEAHTMNSDEFERIQGMRRAVYDSEDYQEGMNAFLEKRKPNF 258 (261)
T ss_dssp ------HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCCCC
T ss_pred ------HHHHHHHHHHhhcCCHHHHHHHHHHHhhHHHhhcCHHHHHHHHHHHccCCCCC
Confidence 2356778888777888999999999999 99999999999999999988775
No 39
>4hdt_A 3-hydroxyisobutyryl-COA hydrolase; ssgcid, carnitinyl-COA dehydratase, enoyl-COA hydratase/ISOM mycobacterium thermoresistibIle; 1.60A {Mycobacterium thermoresistibile}
Probab=100.00 E-value=2.3e-48 Score=416.02 Aligned_cols=286 Identities=20% Similarity=0.283 Sum_probs=227.0
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCC-CCCcCCCCchhhhhccCCC--c
Q 004972 3 APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNG-GRFSGGFDINVFQKVHGAG--D 78 (721)
Q Consensus 3 ~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g-~~F~aG~Dl~~~~~~~~~~--~ 78 (721)
++.|.+++ +++|++||||||+ .|+||.+|+.+|.+++++++.|+++|+|||||.| ++||+|+|++++....... .
T Consensus 8 ~e~vl~e~-~~~Va~itLnrP~~~NAl~~~m~~~l~~al~~~~~d~~vr~vvltg~G~~~FcaG~Dl~~~~~~~~~~~~~ 86 (353)
T 4hdt_A 8 NEDVLVNV-EGGVGLLTLNRPKAINSLTHGMVTTMAERLAAWENDDSVRAVLLTGAGERGLCAGGDVVAIYHSAKADGAE 86 (353)
T ss_dssp CCSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESSSSBSBCCBCHHHHHHHHHTTSHH
T ss_pred CCcEEEEE-ECCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEEeCCCCCEecCcCHHHHhhccchhhHH
Confidence 57899999 7999999999996 7999999999999999999999999999999998 6999999999986532221 1
Q ss_pred ccccchHHHHHHHHHHhhCCCcEEEEECCcccccchHhhhhcCEEEeeCCceEeCcccccCcccc---ccccccccCHHH
Q 004972 79 VSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSK 155 (721)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~a~~~~pe~~~Gl~P~---~~~l~r~~G~~~ 155 (721)
...+.....+++ ..|.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|+ +++|+|++| .+
T Consensus 87 ~~~~~~~~~~~~-~~i~~~~kPvIAav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~iGl~p~~g~~~~l~rl~g-~~ 164 (353)
T 4hdt_A 87 ARRFWFDEYRLN-AHIGRYPKPYVSIMDGIVMGGGVGVGAHGNVRVVTDTTKMAMPEVGIGFIPDVGGTYLLSRAPG-KL 164 (353)
T ss_dssp HHHHHHHHHHHH-HHHHHCSSCEEEEECBEEETHHHHHHTTSSEEEECTTCEEECCGGGGTCCCCTTHHHHHHTSST-TH
T ss_pred HHHHHHHHHHHH-HHHHHCCCCEEEEeECceeecCccccCCcCeeccchhccccCcccccccCCCccceehhhhhhh-HH
Confidence 222223334555 6699999999999999999999999999999999999999999999999997 899999999 69
Q ss_pred HHHHHHcCCCcCHHHHHHcCCccEEcCCchHHHHHHHHHHHHHhcCch----------------hhhhhhccCCCCCcHH
Q 004972 156 AIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKP----------------WIRSLHRTDKLGSLSE 219 (721)
Q Consensus 156 a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~----------------~~~~~~~~~~~~~~~~ 219 (721)
|++|++||++++|+||+++||||+|||++++++.+.+++.+....... .+...+. ..++.+
T Consensus 165 a~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~a~~la~~~~~~~l~~~~~~~~~~~l~~~~~~i~~~f~---~~~~~~ 241 (353)
T 4hdt_A 165 GLHAALTGAPFSGADAIVMGFADHYVPHDKIDEFTRAVIADGVDAALAAHAQEPPASPLAEQRSWIDECYT---GDTVAD 241 (353)
T ss_dssp HHHHHHHCCCBCHHHHHHHTSCSEECCGGGHHHHHHHHHHHCHHHHHHHHCBCCCCCHHHHTHHHHHHHTT---CSSHHH
T ss_pred HHHHHhcCCCCCHHHHHHcCCCcEEeCHHHHHHHHHHHHHhchhHHHHHhcccCCccchHHHHHHHHHHhC---CCCHHH
Confidence 999999999999999999999999999999999999988763321100 0000000 011111
Q ss_pred HHHHHH-----HHHHHHHHhCC-CChhHHHHHHHHHHhhcC-CHHHHHHHHHHHHHHHhCCHHHHHHHHHHH--Hhhhhc
Q 004972 220 AREVLK-----LARLQAKKTAP-NMPQHQACLDVIEEGIVH-GGYSGVLKEAKVFKELVMLDTSRGLVHVFF--AQRATS 290 (721)
Q Consensus 220 ~~~~~~-----~~~~~~~~~~~-~~~A~~~~~~~i~~~~~~-~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~--~~r~~~ 290 (721)
....+. .+.+..++... .-.|+..+|+.++++... +++++++.|.+.+..++.|+|++||++||+ +||+|+
T Consensus 242 i~~~L~~~~~~~a~~~a~~la~~sP~a~~~~k~~l~~~~~~~sl~e~l~~E~~~~~~~~~s~D~~EGvrAfl~dekR~P~ 321 (353)
T 4hdt_A 242 IIAALRAHDAPAAGEAADLIATRSPIALSVTLESVRRAAKLQSLEDTLRQEYRVSCASLKSHDLVEGIRAQLVDKDRNPK 321 (353)
T ss_dssp HHHHHHHHCSHHHHHHHHHHTTSCHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHC----CCC
T ss_pred HHHHHHhcccHHHHHHHHHHHhcCcHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHhCCchHHHHHhhhhhCcCCCCC
Confidence 111111 11122222233 334888899999998876 799999999999999999999999999999 999999
Q ss_pred CCCC
Q 004972 291 KVPN 294 (721)
Q Consensus 291 ~~~~ 294 (721)
++|.
T Consensus 322 w~p~ 325 (353)
T 4hdt_A 322 WRPA 325 (353)
T ss_dssp CSSC
T ss_pred CCCC
Confidence 8763
No 40
>3trr_A Probable enoyl-COA hydratase/isomerase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.09A {Mycobacterium abscessus}
Probab=100.00 E-value=1.2e-48 Score=401.35 Aligned_cols=246 Identities=28% Similarity=0.423 Sum_probs=221.3
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccCCCcc
Q 004972 1 MAAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDV 79 (721)
Q Consensus 1 m~~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~~~ 79 (721)
|+ +.|.++. +++|++||||||+ .|++|.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++.........
T Consensus 5 m~-~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~ 82 (256)
T 3trr_A 5 MA-DEVLIEQ-RDRVLLITINRPDARNAVNRAVSQGLAAAADQLDSSADLSVAIITGAGGNFCAGMDLKAFVSGEAVLSE 82 (256)
T ss_dssp CC-CSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEEGGGCCCCCBCHHHHHHTCCCEET
T ss_pred CC-CceEEEE-ECCEEEEEEcCCCcCCCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCCCceecCcCHHHhccccchhhh
Confidence 44 5689999 7999999999995 7999999999999999999999999999999999999999999998753221111
Q ss_pred cccchHHHHHHHHHHhhCCCcEEEEECCcccccchHhhhhcCEEEeeCCceEeCcccccCcccc---ccccccccCHHHH
Q 004972 80 SLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKA 156 (721)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~a~~~~pe~~~Gl~P~---~~~l~r~~G~~~a 156 (721)
.. . . + ..+ ++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|+ +++|+|++|..+|
T Consensus 83 ~~---~--~-~-~~~-~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a 154 (256)
T 3trr_A 83 RG---L--G-F-TNV-PPRKPIIAAVEGFALAGGTELVLSCDLVVAGRSAKFGIPEVKRGLVAGAGGLLRLPNRIPYQVA 154 (256)
T ss_dssp TE---E--T-T-SSS-CCSSCEEEEECSBCCTHHHHHHHTSSEEEEETTCEECCCGGGGTCCCCSSHHHHHHHHSCHHHH
T ss_pred hh---h--h-H-HHh-cCCCCEEEEECCeeeechhHHHHhCCEEEECCCCEEEehhhccCCCCCccHHHHHHHHhCHHHH
Confidence 11 1 1 2 224 899999999999999999999999999999999999999999999997 8999999999999
Q ss_pred HHHHHcCCCcCHHHHHHcCCccEEcCCchHHHHHHHHHHHHHhcCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCC
Q 004972 157 IEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAP 236 (721)
Q Consensus 157 ~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (721)
++|++||++++|+||+++||||+|||++++++++.++|+++++.+|.+
T Consensus 155 ~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a-------------------------------- 202 (256)
T 3trr_A 155 MELALTGESFTAEDAAKYGFINRLVDDGQALDTALELAAKITANGPLA-------------------------------- 202 (256)
T ss_dssp HHHHHHCCCEEHHHHGGGTCCSEEECTTCHHHHHHHHHHHHHTSCHHH--------------------------------
T ss_pred HHHHHhCCCcCHHHHHHCCCeeEecChHHHHHHHHHHHHHHHcCCHHH--------------------------------
Confidence 999999999999999999999999999999999999999999988643
Q ss_pred CChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcCC
Q 004972 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 292 (721)
Q Consensus 237 ~~~A~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~~ 292 (721)
...+|++++.+...+++++++.|.+.+..++.|+|++|++++|++||+|++.
T Consensus 203 ----~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~p~f~ 254 (256)
T 3trr_A 203 ----VAATKRIIIESASWAPEEAFAKQGEILMPIFVSEDAKEGAKAFAEKRAPVWQ 254 (256)
T ss_dssp ----HHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCCCCC
T ss_pred ----HHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHhcCCCCCCC
Confidence 3456788999999999999999999999999999999999999999988764
No 41
>2vx2_A Enoyl-COA hydratase domain-containing protein 3; isomerase, fatty acid metabolism, transit peptide, lipid Met crontonase, mitochondrion, CAsp; 2.3A {Homo sapiens}
Probab=100.00 E-value=1.9e-48 Score=405.97 Aligned_cols=250 Identities=21% Similarity=0.333 Sum_probs=221.0
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccCCCcccc
Q 004972 3 APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSL 81 (721)
Q Consensus 3 ~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~ 81 (721)
...+.++. +++|++||||||+ .|+||.+|+++|.++++.++.|+++++|||||.|+.||+|+|++++...........
T Consensus 32 ~~~v~~~~-~~~V~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~ 110 (287)
T 2vx2_A 32 PRPTSARQ-LDGIRNIVLSNPKKRNTLSLAMLKSLQSDILHDADSNDLKVIIISAEGPVFSSGHDLKELTEEQGRDYHAE 110 (287)
T ss_dssp CCSEEEEE-ETTEEEEEECCGGGTTCCCHHHHHHHHHHHHTTTTCTTCCEEEEEESSSEEECCSCCC-CCGGGCHHHHHH
T ss_pred CcceEEEE-ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCccCCcCHHHHhcccchhHHHH
Confidence 35788998 7899999999995 699999999999999999999999999999999999999999998754321111111
Q ss_pred cchHHHHHHHHHHhhCCCcEEEEECCcccccchHhhhhcCEEEeeCCceEeCcccccCcccc---ccccccccCHHHHHH
Q 004972 82 MPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIE 158 (721)
Q Consensus 82 ~~~~~~~~~~~~l~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~a~~~~pe~~~Gl~P~---~~~l~r~~G~~~a~~ 158 (721)
+.....+++ ..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|+ ++ |+|++|..+|++
T Consensus 111 ~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~p~~g~~~-L~r~vG~~~A~~ 188 (287)
T 2vx2_A 111 VFQTCSKVM-MHIRNHPVPVIAMVNGLATAAGCQLVASCDIAVASDKSSFATPGVNVGLFCSTPGVA-LARAVPRKVALE 188 (287)
T ss_dssp HHHHHHHHH-HHHHTCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCHHHHHH-HHTTSCHHHHHH
T ss_pred HHHHHHHHH-HHHHhCCCCEEEEECCEEEcHHHHHHHhCCEEEEcCCCEEECchhhhCCCCchHHHH-HHHHhhHHHHHH
Confidence 222344555 6689999999999999999999999999999999999999999999999997 77 999999999999
Q ss_pred HHHcCCCcCHHHHHHcCCccEEcCCchHHHHHHHHHHHHHhcCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCCC
Q 004972 159 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 238 (721)
Q Consensus 159 l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (721)
|++||++++|+||+++||||+|||++++++++.++|++|++.+|..
T Consensus 189 llltg~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a---------------------------------- 234 (287)
T 2vx2_A 189 MLFTGEPISAQEALLHGLLSKVVPEAELQEETMRIARKIASLSRPV---------------------------------- 234 (287)
T ss_dssp HHHHCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSCHHH----------------------------------
T ss_pred HHHhCCCCCHHHHHHCCCcceecCHHHHHHHHHHHHHHHHcCCHHH----------------------------------
Confidence 9999999999999999999999999999999999999999987642
Q ss_pred hhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcC
Q 004972 239 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 291 (721)
Q Consensus 239 ~A~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~ 291 (721)
...+|++++.+...+++++++.|.+.+..++.|+|++|++++|++||+|.+
T Consensus 235 --~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~egi~af~ekr~p~f 285 (287)
T 2vx2_A 235 --VSLGKATFYKQLPQDLGTAYYLTSQAMVDNLALRDGQEGITAFLQKRKPVW 285 (287)
T ss_dssp --HHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCCCC
T ss_pred --HHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCCC
Confidence 234577888888889999999999999999999999999999999988764
No 42
>3qre_A Enoyl-COA hydratase, ECHA12_1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 2.40A {Mycobacterium marinum M}
Probab=100.00 E-value=1.9e-49 Score=415.39 Aligned_cols=253 Identities=25% Similarity=0.325 Sum_probs=179.4
Q ss_pred CCcEEEEEecC-cEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhh---ccCCC
Q 004972 3 APRVTMEVGND-GVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK---VHGAG 77 (721)
Q Consensus 3 ~~~v~~~~~~~-~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~---~~~~~ 77 (721)
++.|.+++ ++ +|++||||||+ .|+||.+|+.+|.+++++++.|+++|+|||||.|++||+|+|++++.. .....
T Consensus 28 ~~~v~~~~-~~~~Va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~FcaG~Dl~~~~~~~~~~~~~ 106 (298)
T 3qre_A 28 QDAVLYEA-TPGGVAIITFNRADRLNAWGPDLAAGFYAAIDRAEADPGIRVIVLTGRGRGFCAGAYLGSADAAAGYDKTM 106 (298)
T ss_dssp CCSEEEEE-CTTSEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSEECC---------------
T ss_pred CCeEEEEE-eCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCcccCcCHHHHhhcccccccc
Confidence 36799999 67 99999999995 699999999999999999999999999999999999999999999864 11110
Q ss_pred ----cccccchHHHHHHHHHHhhCCCcEEEEECCcccccchHhhhhcCEEEeeCCceEeCcccccCcccc---ccccccc
Q 004972 78 ----DVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRL 150 (721)
Q Consensus 78 ----~~~~~~~~~~~~~~~~l~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~a~~~~pe~~~Gl~P~---~~~l~r~ 150 (721)
....+......++ ..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|+ +++|+|+
T Consensus 107 ~~~~~~~~~~~~~~~~~-~~l~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~ 185 (298)
T 3qre_A 107 AKAKDANLADLVGERPP-HFVTMLRKPVIAAINGPCVGIGLTQALMCDVRFAAAGAKFAAVFARRGLIAEFGISWILPRL 185 (298)
T ss_dssp --------------CCT-TGGGGSSSCEEEEECSCEETHHHHHHHHSSEEEEETTCEEECCCCHHHHHCTTSHHHHHHHH
T ss_pred ccchhHHHHHHHHHHHH-HHHHhCCCCEEEEECCceeecchHHHhhCCEEEEcCCCEEECcccccCCCcchhHHHHHHHh
Confidence 1111111222334 5688999999999999999999999999999999999999999999999997 8999999
Q ss_pred cCHHHHHHHHHcCCCcCHHHHHHcCCccEEcCCchHHHHHHHHHHHHHhc-CchhhhhhhccCCCCCcHHHHHHHHHHHH
Q 004972 151 VGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAAR-RKPWIRSLHRTDKLGSLSEAREVLKLARL 229 (721)
Q Consensus 151 ~G~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (721)
+|..+|++|++||++++|+||+++||||+|||++++++++.++|++|++. +|.
T Consensus 186 vG~~~A~ellltg~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~A~~la~~~~p~-------------------------- 239 (298)
T 3qre_A 186 TSWAVALDLLLSGRTFLAEEAAQLGLVKEVVTPEQLMPRALEYAEDIARYCSPS-------------------------- 239 (298)
T ss_dssp SCHHHHHHHHHHCCEEEHHHHHHTTSCSEEECGGGHHHHHHHHHHHHHHHSCHH--------------------------
T ss_pred cCHHHHHHHHHcCCCCCHHHHHHcCCCeEecCHHHHHHHHHHHHHHHHccCCHH--------------------------
Confidence 99999999999999999999999999999999999999999999999998 764
Q ss_pred HHHHhCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcCCC
Q 004972 230 QAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 293 (721)
Q Consensus 230 ~~~~~~~~~~A~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~~~ 293 (721)
|...+|++++.....+++++++.|.+.+..++.|+|++|++++|++||+|...+
T Consensus 240 ----------a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~s~d~~Egv~AF~ekR~P~f~~ 293 (298)
T 3qre_A 240 ----------SMAVIKRQVYGDATRDVVEATSHAEVLLREAMPRPDVIEGIVSFLEKRPPQFPS 293 (298)
T ss_dssp ----------HHHHHHHHHHGGGGC---------------------------------------
T ss_pred ----------HHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCCCCC
Confidence 334667889998888999999999999999999999999999999999988654
No 43
>1dci_A Dienoyl-COA isomerase; lyase; 1.50A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2vre_A
Probab=100.00 E-value=6.3e-48 Score=401.33 Aligned_cols=253 Identities=21% Similarity=0.305 Sum_probs=223.0
Q ss_pred CCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccCCC---
Q 004972 2 AAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAG--- 77 (721)
Q Consensus 2 ~~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~--- 77 (721)
++++|.+++++++|++||||||+ .|++|.+|+.+|.++++++++|+++|+|||||.|++||+|+|++++.......
T Consensus 1 ~~~~v~~~~~~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~ 80 (275)
T 1dci_A 1 AYESIQVTSAQKHVLHVQLNRPEKRNAMNRAFWRELVECFQKISKDSDCRAVVVSGAGKMFTSGIDLMDMASDILQPPGD 80 (275)
T ss_dssp CCSSEEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESTTCSBCCBCHHHHHHHHTSCCCS
T ss_pred CCceEEEEEcCCCEEEEEECCCcccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCccCCcChHHHhhcccccccc
Confidence 35678898855789999999995 79999999999999999999999999999999999999999999986531110
Q ss_pred c-------ccccchHHHHHHHHHHhhCCCcEEEEECCcccccchHhhhhcCEEEeeCCceEeCcccccCcccc---cccc
Q 004972 78 D-------VSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQRL 147 (721)
Q Consensus 78 ~-------~~~~~~~~~~~~~~~l~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~a~~~~pe~~~Gl~P~---~~~l 147 (721)
. ...+....+.++ ..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|+ +++|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l 159 (275)
T 1dci_A 81 DVARIAWYLRDLISRYQKTF-TVIEKCPKPVIAAIHGGCIGGGVDLISACDIRYCTQDAFFQVKEVDVGLAADVGTLQRL 159 (275)
T ss_dssp SHHHHHHHHHHHHHHHHHHH-HHHHHSSSCEEEEECSEEETHHHHHHTTSSEEEEETTCEEECCGGGGTSCCCSSHHHHG
T ss_pred hhhhhhHHHHHHHHHHHHHH-HHHHhCCCCEEEEECCeeeHHHHHHHHhCCEEEEeCCCEEeCcccccCCCCCccHHHHH
Confidence 0 001112233455 6689999999999999999999999999999999999999999999999997 8999
Q ss_pred ccccCH-HHHHHHHHcCCCcCHHHHHHcCCccEEcCC-chHHHHHHHHHHHHHhcCchhhhhhhccCCCCCcHHHHHHHH
Q 004972 148 PRLVGL-SKAIEMMLLSKSITSEEGWKLGLIDAVVTS-EELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLK 225 (721)
Q Consensus 148 ~r~~G~-~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~-~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (721)
+|++|. .+|++|++||++++|+||+++||||+|||+ +++++++.++|+++++.+|.+
T Consensus 160 ~r~vG~~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~~l~~~a~~~a~~la~~~p~a--------------------- 218 (275)
T 1dci_A 160 PKVIGNRSLVNELTFTARKMMADEALDSGLVSRVFPDKDVMLNAAFALAADISSKSPVA--------------------- 218 (275)
T ss_dssp GGTCSCHHHHHHHHHHCCEEEHHHHHHHTSSSEEESSHHHHHHHHHHHHHHHHHSCHHH---------------------
T ss_pred HHHhCcHHHHHHHHHcCCCCCHHHHHHcCCcceecCChHHHHHHHHHHHHHHHhCCHHH---------------------
Confidence 999999 999999999999999999999999999999 999999999999999988643
Q ss_pred HHHHHHHHhCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh---hhhcC
Q 004972 226 LARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQ---RATSK 291 (721)
Q Consensus 226 ~~~~~~~~~~~~~~A~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~---r~~~~ 291 (721)
...+|++++.+...+++++++.|.+.+..++.|+|++|++++|++| |+|.+
T Consensus 219 ---------------~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~eg~~af~ek~~~r~p~f 272 (275)
T 1dci_A 219 ---------------VQGSKINLIYSRDHSVDESLDYMATWNMSMLQTQDIIKSVQAAMEKKDSKSITF 272 (275)
T ss_dssp ---------------HHHHHHHHHHHHHSCHHHHHHHHHHHHHHHTSSHHHHHHHHHHHTTCCGGGCCC
T ss_pred ---------------HHHHHHHHHHhccCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhcCCCCCCCC
Confidence 3356778888888899999999999999999999999999999999 77764
No 44
>3r9t_A ECHA1_1; ssgcid, seattle structural genomics center for infectious DI enoyl-COA hydratase, lyase; 1.75A {Mycobacterium avium subsp} SCOP: c.14.1.0 PDB: 3r9s_A 3r0o_A
Probab=100.00 E-value=9.7e-49 Score=404.61 Aligned_cols=252 Identities=27% Similarity=0.402 Sum_probs=219.8
Q ss_pred CC-CCcEEEEEecCcEEEEEeCCC-CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCC-CCCcCCCCchhhhhccCCC
Q 004972 1 MA-APRVTMEVGNDGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNG-GRFSGGFDINVFQKVHGAG 77 (721)
Q Consensus 1 m~-~~~v~~~~~~~~v~~i~l~~p-~~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g-~~F~aG~Dl~~~~~~~~~~ 77 (721)
|+ ++.|.++. +++|++|||||| +.|+||.+|+.+|.+++++++.|+++|+|||||.| ++||+|+|++++.......
T Consensus 5 m~~~~~v~~~~-~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~~~~ 83 (267)
T 3r9t_A 5 MTDAPGALAER-RGNVMVITINRPEARNAINAAVSIGVGDALEEAQHDPEVRAVVLTGAGDKSFCAGADLKAIARRENLY 83 (267)
T ss_dssp ---CCSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSSEEECCBCHHHHHTTCCCS
T ss_pred CCCCCcEEEEE-ECCEEEEEEcCCcccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCceeCCcChHHHhcccchh
Confidence 44 46799999 799999999999 57999999999999999999999999999999999 5999999999987543222
Q ss_pred cccccchHHHHHHHHHHhhCCCcEEEEECCcccccchHhhhhcCEEEeeCCceEeCcccccCcccc---ccccccccCHH
Q 004972 78 DVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLS 154 (721)
Q Consensus 78 ~~~~~~~~~~~~~~~~l~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~a~~~~pe~~~Gl~P~---~~~l~r~~G~~ 154 (721)
.. .........+ . ..++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|+ +++|+|++|..
T Consensus 84 ~~-~~~~~~~~~~-~-~~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~ 160 (267)
T 3r9t_A 84 HP-DHPEWGFAGY-V-RHFIDKPTIAAVNGTALGGGTELALASDLVVADERAQFGLPEVKRGLIAAAGGVFRIAEQLPRK 160 (267)
T ss_dssp CT-TCGGGCGGGT-T-TCCCSSCEEEEECSEECTHHHHHHHHSSEEEEETTCEECCGGGGTTCCCTTTHHHHHHHHSCHH
T ss_pred hH-HHHhHHHHHH-H-HHhCCCCEEEEECCEEEhHHHHHHHhCCEEEEcCCCEEECcccccCCCCCccHHHHHHHHcCHH
Confidence 11 1111100112 1 24899999999999999999999999999999999999999999999997 88999999999
Q ss_pred HHHHHHHcCCCcCHHHHHHcCCccEEcCCchHHHHHHHHHHHHHhcCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHh
Q 004972 155 KAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKT 234 (721)
Q Consensus 155 ~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (721)
+|++|++||++++|+||+++||||+|||++++++++.++|++|++.+|.+
T Consensus 161 ~A~~l~ltg~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a------------------------------ 210 (267)
T 3r9t_A 161 VAMRLLLTGEPLSAAAARDWGLINEVVEAGSVLDAALALASAITVNAPLS------------------------------ 210 (267)
T ss_dssp HHHHHHHHCCCEEHHHHHHHTSSSEEECTTCHHHHHHHHHHHHHTSCHHH------------------------------
T ss_pred HHHHHHHcCCCCCHHHHHHCCCccEEcChhHHHHHHHHHHHHHHhCChHH------------------------------
Confidence 99999999999999999999999999999999999999999999988643
Q ss_pred CCCChhHHHHHHH---HHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcCC
Q 004972 235 APNMPQHQACLDV---IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 292 (721)
Q Consensus 235 ~~~~~A~~~~~~~---i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~~ 292 (721)
...+|++ ++.+...+++++++.|.+.+..++.|+|++|++++|++||+|.+.
T Consensus 211 ------~~~~K~~~~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~AF~ekR~P~f~ 265 (267)
T 3r9t_A 211 ------VQASKRIAYGVDDGVVVGDEPGWDRTMREMRALLKSEDAKEGPRAFAEKREPVWQ 265 (267)
T ss_dssp ------HHHHHHHHTTEETTEEGGGHHHHHHHHHHHHHHTTSSHHHHHHHHHHTTSCCCCC
T ss_pred ------HHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCCCC
Confidence 3355677 777778889999999999999999999999999999999988753
No 45
>3r9q_A Enoyl-COA hydratase/isomerase; ssgcid, lyase,isomerase; 2.10A {Mycobacterium abscessus} PDB: 3qka_A
Probab=100.00 E-value=5.7e-49 Score=404.89 Aligned_cols=246 Identities=26% Similarity=0.319 Sum_probs=202.9
Q ss_pred CcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccCCCccccc
Q 004972 4 PRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLM 82 (721)
Q Consensus 4 ~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~ 82 (721)
+.|.++. +++|++||||||+ .|++|.+|+.+|.++++.+++|+++|+|||||.|++||+|+|++++....... ...
T Consensus 11 ~~v~~~~-~~~va~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~-~~~- 87 (262)
T 3r9q_A 11 PAVRVEK-AGPVTTVILNRPHARNAVDGPTAAALLAAFTEFDADPEASVAVLWGDNGTFCAGADLKAMGTDRGNE-LHP- 87 (262)
T ss_dssp CSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCTTTTTSTTSCC-CCT-
T ss_pred CEEEEEE-ECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCccCCcCHHHHhccChhh-HHH-
Confidence 3589999 7999999999995 69999999999999999999999999999999999999999999986533211 110
Q ss_pred chHHHHHHHHHHhhCCCcEEEEECCcccccchHhhhhcCEEEeeCCceEeCcccccCcccc---ccccccccCHHHHHHH
Q 004972 83 PDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEM 159 (721)
Q Consensus 83 ~~~~~~~~~~~l~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~a~~~~pe~~~Gl~P~---~~~l~r~~G~~~a~~l 159 (721)
......+ ..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|+ +++|+|++|..+|++|
T Consensus 88 -~~~~~~~-~~~~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~l 165 (262)
T 3r9q_A 88 -HGPGPMG-PSRLRLSKPVIAAISGHAVAGGIELALWCDLRVVEEDAVLGVFCRRWGVPLIDGGTIRLPRLIGHSRAMDL 165 (262)
T ss_dssp -TSSCTTS-STTCCCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECTHHHHTCCCCSSHHHHHHHHHCHHHHHHH
T ss_pred -hhhhHHH-HHHHhCCCCEEEEECCeeehhhhHHHHhCCEEEEeCCCEEecchhccCCCCCccHHHHHHHHhCHHHHHHH
Confidence 0011122 2356899999999999999999999999999999999999999999999997 8999999999999999
Q ss_pred HHcCCCcCHHHHHHcCCccEEcCCchHHHHHHHHHHHHHhcCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCCCh
Q 004972 160 MLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMP 239 (721)
Q Consensus 160 ~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (721)
++||++++|+||+++||||+|||++++++++.++|++|++.+|.+
T Consensus 166 ~ltG~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a----------------------------------- 210 (262)
T 3r9q_A 166 ILTGRPVHANEALDIGLVNRVVARGQAREAAETLAAEIAAFPQQC----------------------------------- 210 (262)
T ss_dssp HHHCCCEEHHHHHHTTSCSEEECTTCHHHHHHHHHHHHHHSCHHH-----------------------------------
T ss_pred HHcCCcCCHHHHHHcCCccEecChhHHHHHHHHHHHHHHhCCHHH-----------------------------------
Confidence 999999999999999999999999999999999999999988643
Q ss_pred hHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcCC
Q 004972 240 QHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 292 (721)
Q Consensus 240 A~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~~ 292 (721)
...+|++++.....+++++++.|.+ +..++.| |++|++++|++||++.+.
T Consensus 211 -~~~~K~~~~~~~~~~l~~~l~~e~~-~~~~~~s-d~~Eg~~AF~ekr~p~~~ 260 (262)
T 3r9q_A 211 -VRADRDSAIAQWGMAEEAALDNEFG-SIERVAT-EALEGAGRFAAGEGRHGA 260 (262)
T ss_dssp -HHHHHHHHHHTTTSCHHHHHHHHHT-HHHHHHC-------------------
T ss_pred -HHHHHHHHHhhhcCCHHHHHHHHHH-HHHHhcc-HHHHHHHHHHcCCCCCCC
Confidence 3456788999999999999999999 9999999 999999999999988753
No 46
>4f47_A Enoyl-COA hydratase ECHA19; ssgcid, seattle structural genomics center for infectious DI niaid; 1.75A {Mycobacterium marinum}
Probab=100.00 E-value=1.3e-48 Score=406.51 Aligned_cols=251 Identities=25% Similarity=0.346 Sum_probs=211.5
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccCCCcccc
Q 004972 3 APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSL 81 (721)
Q Consensus 3 ~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~ 81 (721)
.++|.++. +++|++||||||+ .|++|.+|+.+|.++++++++|+++|+|||||.|++||+|+|++++...........
T Consensus 19 ~~~v~~~~-~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~ 97 (278)
T 4f47_A 19 GPDALVEQ-RGHTLIVTMNRPSRRNALSGEMMQIMVEAWDRVDNDPDIRCCILTGAGGYFCAGMDLKAATKKPPGDSFKD 97 (278)
T ss_dssp CCSEEEEE-ETTEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCCC-------------------
T ss_pred CCceEEEE-ECCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCCCcccCCcChHhhhccchhhhHHH
Confidence 35688999 7999999999995 799999999999999999999999999999999999999999999865432211110
Q ss_pred cchHHHHHHHHHHh---hCCCcEEEEECCcccccchHhhhhcCEEEeeCCceEeCcccccCcccc---ccccccccCHHH
Q 004972 82 MPDVSVELVVNLIE---DCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSK 155 (721)
Q Consensus 82 ~~~~~~~~~~~~l~---~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~a~~~~pe~~~Gl~P~---~~~l~r~~G~~~ 155 (721)
....+.++ +.+. ++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|+ +++|+|++|..+
T Consensus 98 -~~~~~~~~-~~l~~~~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~ 175 (278)
T 4f47_A 98 -GSYDPSRI-DALLKGRRLKKPLIAAVEGPAIAGGTEILQGTDIRVAAESAKFGISEAKWSLYPMGGSAVRLVRQIPYTV 175 (278)
T ss_dssp ----CTTCB-TTTTBSCCCSSCEEEEECSEEETHHHHHHTTCSEEEEETTCEEECCGGGGTCCCTTSHHHHHHHHSCHHH
T ss_pred -HHHHHHHH-HHHHHhcCCCCCEEEEECCEEehHHHHHHHhCCEEEEcCCCEEECcccccCCCCCccHHHHHHHHhCHHH
Confidence 00111222 3455 899999999999999999999999999999999999999999999997 899999999999
Q ss_pred HHHHHHcCCCcCHHHHHHcCCccEEcCCchHHHHHHHHHHHHHhcCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhC
Q 004972 156 AIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTA 235 (721)
Q Consensus 156 a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (721)
|++|++||++++|+||+++||||+|+|++++++++.++|+++++.+|.
T Consensus 176 a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~-------------------------------- 223 (278)
T 4f47_A 176 ACDLLLTGRHITAAEAKEMGLVGHVVPDGQALTKALEIAEIIAANGPL-------------------------------- 223 (278)
T ss_dssp HHHHHHHCCCEEHHHHHHTTSCSEEECTTCHHHHHHHHHHHHHHSCHH--------------------------------
T ss_pred HHHHHHcCCcCCHHHHHHCCCceEeeChhHHHHHHHHHHHHHHhCCHH--------------------------------
Confidence 999999999999999999999999999999999999999999998864
Q ss_pred CCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcCC
Q 004972 236 PNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 292 (721)
Q Consensus 236 ~~~~A~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~~ 292 (721)
|...+|++++.....+++++++.|.+.+..++.|+|++|++++|++||+|.+.
T Consensus 224 ----a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~Af~ekr~p~f~ 276 (278)
T 4f47_A 224 ----AVQAILRTIRETEGMHENEAFKIDTRIGIEVFLSDDAKEGPQAFAQKRKPNFQ 276 (278)
T ss_dssp ----HHHHHHHHHHHTTTSCHHHHHHHHHHHHGGGGGSSHHHHHHHHHHTTSCCCCC
T ss_pred ----HHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCCCCCC
Confidence 33456788999888999999999999999999999999999999999988753
No 47
>1wz8_A Enoyl-COA hydratase; lyase, crotonase, hexamer, structural genomics, riken S genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.14.1.3
Probab=100.00 E-value=2.3e-48 Score=401.68 Aligned_cols=250 Identities=24% Similarity=0.246 Sum_probs=220.4
Q ss_pred CCcEEEEEecCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhc-c-CCCccc
Q 004972 3 APRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKV-H-GAGDVS 80 (721)
Q Consensus 3 ~~~v~~~~~~~~v~~i~l~~p~~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~-~-~~~~~~ 80 (721)
++.+.+++++++|++||||||+.|++|.+|+++|.+++++++.|+++|+|||||.|+.||+|+|++ +... . ......
T Consensus 9 ~~~v~~~~~~~~v~~itlnrp~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~-~~~~~~~~~~~~~ 87 (264)
T 1wz8_A 9 YPGLAFAWPRPGVLEITFRGEKLNAMPPALHRGLARVWRDLEAVEGVRAVLLRGEGGVFSAGGSFG-LIEEMRASHEALL 87 (264)
T ss_dssp CTTEEEEEEETTEEEEEECCSGGGCBCHHHHHHHHHHHHHHTTCTTCSEEEEEEGGGCCBCCBCHH-HHHHHHHCHHHHH
T ss_pred CCeEEEEEccCCEEEEEeCCCCcCCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCCCCCcccCccc-cccccccchHHHH
Confidence 456888874478999999999999999999999999999999999999999999999999999999 7542 1 101011
Q ss_pred ccchHHHHHHHHHHhhCCCcEEEEECCcccccchHhhhhcCEEEeeCCceEeCcccccCcccc---ccccccccCHHHHH
Q 004972 81 LMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAI 157 (721)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~a~~~~pe~~~Gl~P~---~~~l~r~~G~~~a~ 157 (721)
.+....++++ ..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|+ +++|+|++|..+|+
T Consensus 88 ~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~ 166 (264)
T 1wz8_A 88 RVFWEARDLV-LGPLNFPRPVVAAVEKVAVGAGLALALAADIAVVGKGTRLLDGHLRLGVAAGDHAVLLWPLLVGMAKAK 166 (264)
T ss_dssp HHHHHHHHHH-HHHHHSSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTSCCTTTHHHHTHHHHCHHHHH
T ss_pred HHHHHHHHHH-HHHHcCCCCEEEEECCeeechhHHHHHhCCEEEecCCCEEeCchhhcCcCCCccHHHHHHHHhCHHHHH
Confidence 1223344556 6689999999999999999999999999999999999999999999999996 89999999999999
Q ss_pred HHHHcCCCcCHHHHHHcCCccEEcCCchHHHHHHHHHHHHHhcCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCC
Q 004972 158 EMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 237 (721)
Q Consensus 158 ~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (721)
+|++||++++|+||+++||||+|||++++.+++.++++++++.+|..
T Consensus 167 ~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a--------------------------------- 213 (264)
T 1wz8_A 167 YHLLLNEPLTGEEAERLGLVALAVEDEKVYEKALEVAERLAQGPKEA--------------------------------- 213 (264)
T ss_dssp HHHHHTCCEEHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSCHHH---------------------------------
T ss_pred HHHHcCCCCCHHHHHHCCCceeecChhHHHHHHHHHHHHHHhCCHHH---------------------------------
Confidence 99999999999999999999999999999999999999999987642
Q ss_pred ChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcC
Q 004972 238 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 291 (721)
Q Consensus 238 ~~A~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~ 291 (721)
...+|++++.+... ++++++.|.+.+..++.|+|+++++++|++||+|.+
T Consensus 214 ---~~~~K~~l~~~~~~-~~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~p~f 263 (264)
T 1wz8_A 214 ---LHHTKHALNHWYRS-FLPHFELSLALEFLGFSGKELEEGLKALKEKRPPEF 263 (264)
T ss_dssp ---HHHHHHHHHHHHHT-THHHHHHHHHHHHHGGGSHHHHHHHHHHHTTSCCCC
T ss_pred ---HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcChHHHHHHHHHHccCCCCC
Confidence 23456778877777 899999999999999999999999999999988763
No 48
>4eml_A Naphthoate synthase; 1,4-dihydroxy-2-naphthoyl-coenzyme A, lyase; 2.04A {Synechocystis SP}
Probab=100.00 E-value=3.5e-48 Score=401.87 Aligned_cols=252 Identities=23% Similarity=0.291 Sum_probs=211.6
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEe-----CC-CCCcCCCCchhhhhccC
Q 004972 3 APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTG-----NG-GRFSGGFDINVFQKVHG 75 (721)
Q Consensus 3 ~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg-----~g-~~F~aG~Dl~~~~~~~~ 75 (721)
++.|.++. +++|++||||||+ .|+||.+|+.+|.++++.++.|+++|+||||| .| ++||+|+|++++.....
T Consensus 9 ~~~v~~~~-~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~~~~~~G~~~F~aG~Dl~~~~~~~~ 87 (275)
T 4eml_A 9 YDDILYYK-AGGIAKIVINRPHKRNAFRPQTVFELYDAFCNAREDNRIGVVLLTGAGPHSDGKYAFCSGGDQSVRGEGGY 87 (275)
T ss_dssp CSSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEECCCCTTSCCEEECCBCCC-------
T ss_pred CceEEEEE-ECCEEEEEecCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEeCCCcCcCCCCceeCCcChhhhhcccc
Confidence 57799999 7999999999995 69999999999999999999999999999999 88 59999999999864211
Q ss_pred CCcccccchHHHHHHHHHHhhCCCcEEEEECCcccccchHhhhhcCEEEeeCCceEeCcccccCcccc---ccccccccC
Q 004972 76 AGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVG 152 (721)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~l~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~a~~~~pe~~~Gl~P~---~~~l~r~~G 152 (721)
.............++ +.+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|+ +++|+|++|
T Consensus 88 ~~~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~~g~~~L~r~vG 166 (275)
T 4eml_A 88 IDDQGTPRLNVLDLQ-RLIRSMPKVVIALVAGYAIGGGHVLHLVCDLTIAADNAIFGQTGPKVGSFDGGFGSSYLARIVG 166 (275)
T ss_dssp -------CCCHHHHH-HHHHHSSSEEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCSTTTHHHHHHHC
T ss_pred cchhhHHHHHHHHHH-HHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCCEEECcccccCCCCCccHHHHHHHHhH
Confidence 111111111234555 6789999999999999999999999999999999999999999999998875 899999999
Q ss_pred HHHHHHHHHcCCCcCHHHHHHcCCccEEcCCchHHHHHHHHHHHHHhcCchhhhhhhccCCCCCcHHHHHHHHHHHHHHH
Q 004972 153 LSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAK 232 (721)
Q Consensus 153 ~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (721)
..+|++|++||++++|+||+++||||+|||++++++++.++|++|++.+|.++
T Consensus 167 ~~~A~~llltg~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~--------------------------- 219 (275)
T 4eml_A 167 QKKAREIWYLCRQYSAQEAERMGMVNTVVPVDRLEEEGIQWAKEILSKSPLAI--------------------------- 219 (275)
T ss_dssp HHHHHHHHHHCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSCHHHH---------------------------
T ss_pred HHHHHHHHHhCCCcCHHHHHHcCCccEeeCHHHHHHHHHHHHHHHHhCCHHHH---------------------------
Confidence 99999999999999999999999999999999999999999999999887432
Q ss_pred HhCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcCCC
Q 004972 233 KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 293 (721)
Q Consensus 233 ~~~~~~~A~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~~~ 293 (721)
..+|++++..... .....+.|.+.+..++.|+|++|++.+|++||+|...+
T Consensus 220 ---------~~~K~~l~~~~~~-~~~~~~~~~~~~~~~~~s~d~~eg~~AF~ekR~p~f~~ 270 (275)
T 4eml_A 220 ---------RCLKAAFNADCDG-QAGLQELAGNATLLYYMTEEGSEGKQAFLEKRPPDFSQ 270 (275)
T ss_dssp ---------HHHHHHHHHTTSH-HHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCCCCTT
T ss_pred ---------HHHHHHHHhhhcc-chhHHHHHHHHHHHHhcCHHHHHHHHHHHcCCCCCCCC
Confidence 3456666665432 33445678888889999999999999999999987543
No 49
>3qk8_A Enoyl-COA hydratase ECHA15; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 1.60A {Mycobacterium marinum M} SCOP: c.14.1.0 PDB: 3q1t_A
Probab=100.00 E-value=1.8e-48 Score=403.71 Aligned_cols=250 Identities=22% Similarity=0.274 Sum_probs=212.1
Q ss_pred CCcEEEEEecCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccCCC-cccc
Q 004972 3 APRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAG-DVSL 81 (721)
Q Consensus 3 ~~~v~~~~~~~~v~~i~l~~p~~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~-~~~~ 81 (721)
+++|.+++++++|++||||||+.|++|.+|+.+|.++++.+++|+++|+|||||.|++||+|+|++++....... ....
T Consensus 12 ~~~v~~~~~~~~v~~itlnrp~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~ 91 (272)
T 3qk8_A 12 FPSLRFEPGEHGVLNLVLDSPGLNSVGPQMHRDLADVWPVIDRDPDVRVVLVRGEGKAFSSGGSFELIDETIGDYEGRIR 91 (272)
T ss_dssp CTTEEEEECSTTEEEEEECCHHHHEECHHHHHHHHHHHHHHHHCTTCSEEEEEESSSCSBCEECHHHHHHHHHCHHHHHH
T ss_pred CCeEEEEEeCCCEEEEEECCCCcCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCCeeCCcCHHHHhccccchHHHHH
Confidence 578999994358999999999999999999999999999999999999999999999999999999986532111 1112
Q ss_pred cchHHHHHHHHHHhhCCCcEEEEECCcccccchHhhhhcCEEEeeCCceEeCcccccCcccc---ccccccccCHHHHHH
Q 004972 82 MPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIE 158 (721)
Q Consensus 82 ~~~~~~~~~~~~l~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~a~~~~pe~~~Gl~P~---~~~l~r~~G~~~a~~ 158 (721)
+....++++ ..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|+ +++|+|++|..+|++
T Consensus 92 ~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~ 170 (272)
T 3qk8_A 92 IMREARDLV-LNLVNLDKPVVSAIRGPAVGAGLVVALLADISVASATAKIIDGHTKLGVAAGDHAAICWPLLVGMAKAKY 170 (272)
T ss_dssp HHHHHHHHH-HHHHTCCSCEEEEECSEEEHHHHHHHHHSSEEEEETTCEEECCHHHHTSCSCSSHHHHTHHHHCHHHHHH
T ss_pred HHHHHHHHH-HHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCCEEECchhccCCCCCccHHHHHHHHhCHHHHHH
Confidence 223344556 6799999999999999999999999999999999999999999999999997 899999999999999
Q ss_pred HHHcCCCcCHHHHHHcCCccEEcCCchHHHHHHHHHHHHHhcCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCCC
Q 004972 159 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 238 (721)
Q Consensus 159 l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (721)
|++||++++|+||+++||||+|||++++++++.++|++|++.+|.+++
T Consensus 171 l~ltg~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~-------------------------------- 218 (272)
T 3qk8_A 171 YLLTCETLSGEEAERIGLVSTCVDDDEVLPTATRLAENLAQGAQNAIR-------------------------------- 218 (272)
T ss_dssp HHHHCCCEEHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSCHHHHH--------------------------------
T ss_pred HHHcCCCCCHHHHHHCCCCcEeeCHhHHHHHHHHHHHHHHcCCHHHHH--------------------------------
Confidence 999999999999999999999999999999999999999998875332
Q ss_pred hhHHHHHHHHHHhhc---CCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcCCC
Q 004972 239 PQHQACLDVIEEGIV---HGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 293 (721)
Q Consensus 239 ~A~~~~~~~i~~~~~---~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~~~ 293 (721)
.+|++++.... .+++..++.| ..++.|+|++|++++|++||+|.+..
T Consensus 219 ----~~K~~l~~~~~~~~~~~~~~~~~e----~~~~~s~d~~eg~~Af~ekR~p~f~g 268 (272)
T 3qk8_A 219 ----WTKRSLNHWYRMFGPTFETSLGLE----FLGFTGPDVQEGLAAHRQKRPARFTD 268 (272)
T ss_dssp ----HHHHHHHHHHHHTHHHHHHHHHHH----HHHTTSSHHHHHHHHHHTTSCCCC--
T ss_pred ----HHHHHHHHHHhhcchhHHHHHHHH----HHHhCCHHHHHHHHHHHcCCCCCCCC
Confidence 34455544332 2344444444 47899999999999999999987643
No 50
>3qxi_A Enoyl-COA hydratase ECHA1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 2.20A {Mycobacterium marinum}
Probab=100.00 E-value=5.5e-48 Score=398.53 Aligned_cols=247 Identities=24% Similarity=0.367 Sum_probs=213.7
Q ss_pred CCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccCCCccc
Q 004972 2 AAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVS 80 (721)
Q Consensus 2 ~~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~ 80 (721)
+++.|.+++ +++|++||||||+ .|++|.+|+.+|.+++++++.|+++|+|||||.|++||+|+|++++..........
T Consensus 13 ~~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~ 91 (265)
T 3qxi_A 13 TEPEVLVEQ-RDRILIITINRPKAKNSVNAAVSRALADAMDRLDADAGLSVGILTGAGGSFCAGMDLKAFARGENVVVEG 91 (265)
T ss_dssp --CCEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCCCCSBC-------CCCEETT
T ss_pred CCCeEEEEE-ECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCeeCCCChhhhhccchhhhhh
Confidence 357899999 7999999999995 69999999999999999999999999999999999999999999986532211110
Q ss_pred ccchHHHHHHHHHHhhCCCcEEEEECCcccccchHhhhhcCEEEeeCCceEeCcccccCcccc---ccccccccCHHHHH
Q 004972 81 LMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAI 157 (721)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~a~~~~pe~~~Gl~P~---~~~l~r~~G~~~a~ 157 (721)
... . + ..+.. ||||||+|||+|+|||++|+++||+||++++++|++||+++|++|+ +++|+|++|..+|+
T Consensus 92 ---~~~-~-~-~~~~~-~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~ 164 (265)
T 3qxi_A 92 ---RGL-G-F-TERPP-AKPLIAAVEGYALAGGTELALATDLIVAARDSAFGIPEVKRGLVAGGGGLLRLPERIPYAIAM 164 (265)
T ss_dssp ---TEE-T-T-TTSCC-SSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHSCHHHHH
T ss_pred ---hhh-h-H-HHhhC-CCCEEEEECCceeHHHHHHHHhCCEEEEcCCCEEECcccccCcCCcccHHHHHHHHhCHHHHH
Confidence 111 1 2 22334 9999999999999999999999999999999999999999999997 89999999999999
Q ss_pred HHHHcCCCcCHHHHHHcCCccEEcCCchHHHHHHHHHHHHHhcCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCC
Q 004972 158 EMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 237 (721)
Q Consensus 158 ~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (721)
+|++||++++|+||+++||||+|||++++++++.++|++|++.+|.+
T Consensus 165 ~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a--------------------------------- 211 (265)
T 3qxi_A 165 ELALTGDNLSAERAHALGMVNVLAEPGAALDAAIALAEKITANGPLA--------------------------------- 211 (265)
T ss_dssp HHHHHCCCEEHHHHHHTTSCSEEECTTCHHHHHHHHHHHHHTSCHHH---------------------------------
T ss_pred HHHHcCCCcCHHHHHHCCCccEeeChhHHHHHHHHHHHHHHcCCHHH---------------------------------
Confidence 99999999999999999999999999999999999999999988643
Q ss_pred ChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcCC
Q 004972 238 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 292 (721)
Q Consensus 238 ~~A~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~~ 292 (721)
...+|++++.....+++++++.|.+.+..++.|+|++|++++|++||+|.+.
T Consensus 212 ---~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~p~f~ 263 (265)
T 3qxi_A 212 ---VAATKRIITESRGWSLDTRFAQQMKILFPIFTSNDAKEGAIAFAEKRPPRWT 263 (265)
T ss_dssp ---HHHHHHHHHHHTTCCTTTHHHHHHHHHHHHHHCHHHHHHHHHHHTTSCCCCC
T ss_pred ---HHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHcCCCCCCC
Confidence 3356788888888899999999999999999999999999999999988764
No 51
>2f6q_A Peroxisomal 3,2-trans-enoyl-COA isomerase; peroxisomes, fatty acid metabolism, STR genomics, structural genomics consortium, SGC; 1.95A {Homo sapiens} SCOP: c.14.1.3
Probab=100.00 E-value=5.8e-48 Score=401.59 Aligned_cols=249 Identities=22% Similarity=0.292 Sum_probs=206.1
Q ss_pred CCCcEEEEEecCcEEEEEeCCC-CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccCCCc--
Q 004972 2 AAPRVTMEVGNDGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGD-- 78 (721)
Q Consensus 2 ~~~~v~~~~~~~~v~~i~l~~p-~~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~~-- 78 (721)
.++.+.++. +++|++|||||| +.|++|.+|+++|.+++++++.|+++ +|||||.|+.||+|+|++++........
T Consensus 24 ~~~~i~~~~-~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~v-~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~ 101 (280)
T 2f6q_A 24 GFETLVVTS-EDGITKIMFNRPKKKNAINTEMYHEIMRALKAASKDDSI-ITVLTGNGDYYSSGNDLTNFTDIPPGGVEE 101 (280)
T ss_dssp ECSSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHSSCS-EEEEEESTTCSBCCBCC----CCCTTHHHH
T ss_pred CCCeEEEEE-ECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHhhCCCE-EEEEeCCCCCcccCCCHHHHhhcCcchhhH
Confidence 356788998 789999999999 47999999999999999999999999 9999999999999999998854221110
Q ss_pred -ccccchHHHHHHHHHHhhCCCcEEEEECCcccccchHhhhhcCEEEeeCCceEeCcccccCcccc---ccccccccCHH
Q 004972 79 -VSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLS 154 (721)
Q Consensus 79 -~~~~~~~~~~~~~~~l~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~a~~~~pe~~~Gl~P~---~~~l~r~~G~~ 154 (721)
...+....++++ ..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|+ +++|+|++|..
T Consensus 102 ~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~ 180 (280)
T 2f6q_A 102 KAKNNAVLLREFV-GCFIDFPKPLIAVVNGPAVGISVTLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTFPKIMSPA 180 (280)
T ss_dssp HHHHHHHHHHHHH-HHHHSCCSCEEEEECSCEETHHHHGGGGCSEEEEETTCEEECCTGGGTCCCCTTHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHHH-HHHHcCCCCEEEEECCeeehHHHHHHHhCCEEEECCCcEEECchHhhCCCCcccHHHHHHHHhCHH
Confidence 001112334555 6689999999999999999999999999999999999999999999999997 89999999999
Q ss_pred HHHHHHHcCCCcCHHHHHHcCCccEEcCCchHHHHHHHHHHHHHhcCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHh
Q 004972 155 KAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKT 234 (721)
Q Consensus 155 ~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (721)
+|++|++||++++|+||+++||||+|||++++++++.++++++++.+|..
T Consensus 181 ~A~~l~ltg~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a------------------------------ 230 (280)
T 2f6q_A 181 KATEMLIFGKKLTAGEACAQGLVTEVFPDSTFQKEVWTRLKAFAKLPPNA------------------------------ 230 (280)
T ss_dssp HHHHHHTTCCCEEHHHHHHTTSCSEEECTTTHHHHHHHHHHHHTTSCHHH------------------------------
T ss_pred HHHHHHHcCCCCCHHHHHHCCCcceEECHHHHHHHHHHHHHHHHhCCHHH------------------------------
Confidence 99999999999999999999999999999999999999999999887642
Q ss_pred CCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhh
Q 004972 235 APNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRAT 289 (721)
Q Consensus 235 ~~~~~A~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~ 289 (721)
...+|+.++.....+++++++.|.+.+..++.|+|++|++++|++||+|
T Consensus 231 ------~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~eg~~af~ekR~p 279 (280)
T 2f6q_A 231 ------LRISKEVIRKREREKLHAVNAEECNVLQGRWLSDECTNAVVNFLSRKSK 279 (280)
T ss_dssp ------HHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHTSHHHHC-----------
T ss_pred ------HHHHHHHHHhhhhcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHccCCC
Confidence 2345677777776778999999999999999999999999999999876
No 52
>3rrv_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.45A {Mycobacterium avium subsp}
Probab=100.00 E-value=7.3e-48 Score=399.34 Aligned_cols=244 Identities=20% Similarity=0.266 Sum_probs=218.4
Q ss_pred CcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccCCC-cccc
Q 004972 4 PRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAG-DVSL 81 (721)
Q Consensus 4 ~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~-~~~~ 81 (721)
+.|.++. +++|++||||||+ .|++|.+|+.+|.+++++++.|+++|+|||||.|++||+|+|++++....... ....
T Consensus 28 ~~v~~~~-~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~ 106 (276)
T 3rrv_A 28 TEIDVRA-DGALRIITLNRPDSLNSVNDDLHVGLARLWQRLTDDPTARAAVITGAGRAFSAGGDFGYLKELSADADLRAK 106 (276)
T ss_dssp TTEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCHHHHHHHHHCHHHHHH
T ss_pred CeEEEEE-ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCcccCCcCHHHHhhcccchHHHHH
Confidence 4688998 7999999999996 79999999999999999999999999999999999999999999986532111 1112
Q ss_pred cchHHHHHHHHHHhhCCCcEEEEECCcccccchHhhhhcCEEEeeCCceEeCcccccCcccc---ccccccccCHHHHHH
Q 004972 82 MPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIE 158 (721)
Q Consensus 82 ~~~~~~~~~~~~l~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~a~~~~pe~~~Gl~P~---~~~l~r~~G~~~a~~ 158 (721)
+....+.++ ..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|+ +++|+|++|..+|++
T Consensus 107 ~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~e 185 (276)
T 3rrv_A 107 TIRDGREIV-LGMARCRIPVVAAVNGPAVGLGCSLVALSDIVYIAENAYLADPHVQVGLVAADGGPLTWPLHISLLLAKE 185 (276)
T ss_dssp HHHHHHHHH-HHHHHCSSCEEEEECSCEETHHHHHHHTSSEEEEETTCEEECCHHHHTCCCCSSHHHHGGGTSCHHHHHH
T ss_pred HHHHHHHHH-HHHHhCCCCEEEEECceeeHHHHHHHHHCCEEEEeCCCEEECchhccCcCCCccHHHHHHHHhCHHHHHH
Confidence 223344556 6799999999999999999999999999999999999999999999999997 899999999999999
Q ss_pred HHHcCCCcCHHHHHHcCCccEEcCCchHHHHHHHHHHHHHhcCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCCC
Q 004972 159 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 238 (721)
Q Consensus 159 l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (721)
|++||++++|+||+++||||+|| +++++++.++|+++++.+|.+
T Consensus 186 llltG~~i~A~eA~~~GLv~~vv--~~l~~~a~~~A~~la~~~~~a---------------------------------- 229 (276)
T 3rrv_A 186 YALTGTRISAQRAVELGLANHVA--DDPVAEAIACAKKILELPQQA---------------------------------- 229 (276)
T ss_dssp HHHHCCCEEHHHHHHHTSCSEEE--SSHHHHHHHHHHHHHHSCHHH----------------------------------
T ss_pred HHHcCCCCCHHHHHHcCCHHHHH--HHHHHHHHHHHHHHHcCCHHH----------------------------------
Confidence 99999999999999999999999 899999999999999988643
Q ss_pred hhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhh
Q 004972 239 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQR 287 (721)
Q Consensus 239 ~A~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r 287 (721)
...+|++++.....+++++++.|...+..++.|+|++|++.+|++||
T Consensus 230 --~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~AF~ekR 276 (276)
T 3rrv_A 230 --VESTKRVLNIHLERAVLASLDYALSAESQSFVTEDFRSIVTKLADKN 276 (276)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSHHHHHHHHHHHCCC
T ss_pred --HHHHHHHHHHhhhcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCC
Confidence 33567778877777889999999999999999999999999999986
No 53
>3l3s_A Enoyl-COA hydratase/isomerase family protein; crotonase superfamily, dimer of trimers, PSI-2, NYSGXRC, structural genomics; 2.32A {Ruegeria pomeroyi}
Probab=100.00 E-value=6.3e-48 Score=397.92 Aligned_cols=248 Identities=24% Similarity=0.321 Sum_probs=205.0
Q ss_pred CCCcEEEEEecCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccC--C-C-
Q 004972 2 AAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHG--A-G- 77 (721)
Q Consensus 2 ~~~~v~~~~~~~~v~~i~l~~p~~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~--~-~- 77 (721)
+++.+.++..+++|++||||||+.|++|.+|+.+|.++++.++.|+++|+|||||.|+.||+|+|++++..... . .
T Consensus 4 ~~~~~~~~~~~~~v~~itlnrP~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~ 83 (263)
T 3l3s_A 4 SQDGLLGEVLSEGVLTLTLGRAPAHPLSRAMIAALHDALRRAMGDDHVHVLVIHGPGRIFCAGHDLKEIGRHRADPDEGR 83 (263)
T ss_dssp ----CEEEEESSSEEEEEECSTTTCCCCHHHHHHHHHHHHHHHTCTTCCEEEEECCSSEEECCSCSCCCCC-----CCSH
T ss_pred CccceEEEEeeCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCccCCcChHHHhhccccccccH
Confidence 46677777767899999999995599999999999999999999999999999999999999999998865310 1 1
Q ss_pred -cccccchHHHHHHHHHHhhCCCcEEEEECCcccccchHhhhhcCEEEeeCCceEeCcccccCcccc--ccccccccCHH
Q 004972 78 -DVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG--TQRLPRLVGLS 154 (721)
Q Consensus 78 -~~~~~~~~~~~~~~~~l~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~a~~~~pe~~~Gl~P~--~~~l~r~~G~~ 154 (721)
....+......++ ..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|+ +++|+|++|..
T Consensus 84 ~~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~~~g~~~~l~r~vG~~ 162 (263)
T 3l3s_A 84 AFVTDLFEACSALM-LDLAHCPKPTIALVEGIATAAGLQLMAACDLAYASPAARFCLPGVQNGGFCTTPAVAVSRVIGRR 162 (263)
T ss_dssp HHHHHHHHHHHHHH-HHHHTCSSCEEEEESSEEETHHHHHHHHSSEEEECTTCEEECCTTTTTSCCHHHHHHHHTTSCHH
T ss_pred HHHHHHHHHHHHHH-HHHHhCCCCEEEEECCEEEHHHHHHHHHCCEEEecCCCEEeCchhccCCCCccHHHHHHHHcCHH
Confidence 1112223344555 6799999999999999999999999999999999999999999999999976 99999999999
Q ss_pred HHHHHHHcCCCcCHHHHHHcCCccEEcCCchHHHHHHHHHHHHHhcCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHh
Q 004972 155 KAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKT 234 (721)
Q Consensus 155 ~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (721)
+|++|++||++++|+||+++||||+|||++++++++.++|+++++.+|.+
T Consensus 163 ~A~~l~ltg~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a------------------------------ 212 (263)
T 3l3s_A 163 AVTEMALTGATYDADWALAAGLINRILPEAALATHVADLAGALAARNQAP------------------------------ 212 (263)
T ss_dssp HHHHHHHHCCEEEHHHHHHHTSSSEECCHHHHHHHHHHHHHHHHSSCHHH------------------------------
T ss_pred HHHHHHHcCCCCCHHHHHHCCCccEEeCHHHHHHHHHHHHHHHHhCCHHH------------------------------
Confidence 99999999999999999999999999999999999999999999988643
Q ss_pred CCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Q 004972 235 APNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQ 286 (721)
Q Consensus 235 ~~~~~A~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~ 286 (721)
...+|++++.....+++++++.|.+.+..++.|+|++|++++|.+.
T Consensus 213 ------~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~Eg~~Af~~~ 258 (263)
T 3l3s_A 213 ------LRRGLETLNRHLELPLEQAYALATPVMVEHFMDPGRRHLDWIDEGH 258 (263)
T ss_dssp ------HHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHC--------------
T ss_pred ------HHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHhhcc
Confidence 3456788999888999999999999999999999999999999864
No 54
>1sg4_A 3,2-trans-enoyl-COA isomerase, mitochondrial; crotonase fold; HET: CO8; 1.30A {Homo sapiens} SCOP: c.14.1.3 PDB: 1xx4_A
Probab=100.00 E-value=1.9e-48 Score=401.48 Aligned_cols=248 Identities=22% Similarity=0.316 Sum_probs=209.4
Q ss_pred EEEEEe-cCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeC-CCCCcCCCCchhhhhccCCCcccccc
Q 004972 6 VTMEVG-NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGN-GGRFSGGFDINVFQKVHGAGDVSLMP 83 (721)
Q Consensus 6 v~~~~~-~~~v~~i~l~~p~~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~-g~~F~aG~Dl~~~~~~~~~~~~~~~~ 83 (721)
+++..+ +++|++||||||+.|++|.+|+++|.+++++++.|+++++|||||. |++||+|+|++++.... ......+.
T Consensus 5 v~v~~~~~~~v~~itlnrp~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~~g~~F~aG~Dl~~~~~~~-~~~~~~~~ 83 (260)
T 1sg4_A 5 VLVEPDAGAGVAVMKFKNPPVNSLSLEFLTELVISLEKLENDKSFRGVILTSDRPGVFSAGLDLTEMCGRS-PAHYAGYW 83 (260)
T ss_dssp EEEEEETTTTEEEEEECCTTTTEECHHHHHHHHHHHHHHHHCTTCCEEEEEESSTEESCCEECGGGGSSCC-HHHHHHHH
T ss_pred EEEEEEecCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCCCceEcCcCHHHHhccC-HHHHHHHH
Confidence 444443 6889999999998899999999999999999999999999999999 78999999999875321 11111222
Q ss_pred hHHHHHHHHHHhhCCCcEEEEECCcccccchHhhhhcCEEEee--CCceEeCcccccCcccc---ccccccccCHHHHHH
Q 004972 84 DVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA--PKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIE 158 (721)
Q Consensus 84 ~~~~~~~~~~l~~~~~p~Iaav~G~a~GgG~~lalacD~ria~--~~a~~~~pe~~~Gl~P~---~~~l~r~~G~~~a~~ 158 (721)
...+.++ ..+.++||||||+|||+|+|||++|+++||+||++ ++++|++||+++|++|+ +++|++++|..+|++
T Consensus 84 ~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~ 162 (260)
T 1sg4_A 84 KAVQELW-LRLYQSNLVLVSAINGACPAGGCLVALTCDYRILADNPRYCIGLNETQLGIIAPFWLKDTLENTIGHRAAER 162 (260)
T ss_dssp HHHHHHH-HHHHTCSSEEEEEECEEBCHHHHHHHTTSSEEEEECCTTCCBSCCGGGGTCCCCHHHHHHHHHHHCHHHHHH
T ss_pred HHHHHHH-HHHHcCCCCEEEEECCeeehHHHHHHHhCCEEEEecCCCCEEeCchhhhCCCCchhHHHHHHHHhCHHHHHH
Confidence 2344556 67899999999999999999999999999999999 89999999999999997 899999999999999
Q ss_pred HHHcCCCcCHHHHHHcCCccEEcCCchHHHHHHHHHHHHHhcCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCCC
Q 004972 159 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 238 (721)
Q Consensus 159 l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (721)
|++||++++|+||+++||||+|+|++++++++.++++++++.+|..+
T Consensus 163 llltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~--------------------------------- 209 (260)
T 1sg4_A 163 ALQLGLLFPPAEALQVGIVDQVVPEEQVQSTALSAIAQWMAIPDHAR--------------------------------- 209 (260)
T ss_dssp HHHHTCCBCHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSCHHHH---------------------------------
T ss_pred HHHcCCcCCHHHHHHcCCCCEecCHHHHHHHHHHHHHHHHhCCHHHH---------------------------------
Confidence 99999999999999999999999999999999999999999876432
Q ss_pred hhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcC
Q 004972 239 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 291 (721)
Q Consensus 239 ~A~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~ 291 (721)
..+|++++.....+++++++.|.+.+..++.|+|+++++++|++||+++|
T Consensus 210 ---~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~s~d~~eg~~af~ekr~~~~ 259 (260)
T 1sg4_A 210 ---QLTKAMMRKATASRLVTQRDADVQNFVSFISKDSIQKSLQMYLERLKEEK 259 (260)
T ss_dssp ---HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHTSHHHHHHHTC---------
T ss_pred ---HHHHHHHHHhhhccHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcccC
Confidence 34566777766667888899999999999999999999999999999876
No 55
>2uzf_A Naphthoate synthase; lyase, menaquinone biosynthesis; HET: CAA; 2.9A {Staphylococcus aureus}
Probab=100.00 E-value=2e-47 Score=396.38 Aligned_cols=250 Identities=26% Similarity=0.351 Sum_probs=214.1
Q ss_pred CCcEEEEEecCcEEEEEeCCC-CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCC-CCcCCCCchhhhhccCCCccc
Q 004972 3 APRVTMEVGNDGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGG-RFSGGFDINVFQKVHGAGDVS 80 (721)
Q Consensus 3 ~~~v~~~~~~~~v~~i~l~~p-~~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~-~F~aG~Dl~~~~~~~~~~~~~ 80 (721)
++.+.++. +++|++|||||| +.|+||.+|+++|.+++++++.|+++++|||||.|+ +||+|+|++++....... ..
T Consensus 12 ~~~i~~~~-~~~va~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~FcaG~Dl~~~~~~~~~~-~~ 89 (273)
T 2uzf_A 12 YDEIKYEF-YEGIAKVTINRPEVRNAFTPKTVAEMIDAFSRARDDQNVSVIVLTGEGDLAFCSGGDQKKRGHGGYVG-ED 89 (273)
T ss_dssp CSSEEEEE-ETTEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSEEEECCCCCC--------C-CS
T ss_pred CceEEEEE-ECCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEecCCCCceecCcCcHhhhccccch-hh
Confidence 45688998 789999999999 589999999999999999999999999999999998 999999999885421111 11
Q ss_pred cc-chHHHHHHHHHHhhCCCcEEEEECCcccccchHhhhhcCEEEeeCCceEeCcccccCcccc---ccccccccCHHHH
Q 004972 81 LM-PDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKA 156 (721)
Q Consensus 81 ~~-~~~~~~~~~~~l~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~a~~~~pe~~~Gl~P~---~~~l~r~~G~~~a 156 (721)
.+ ......++ +.+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|+ +++|++++|..+|
T Consensus 90 ~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~A 168 (273)
T 2uzf_A 90 QIPRLNVLDLQ-RLIRIIPKPVIAMVKGYAVGGGNVLNVVCDLTIAADNAIFGQTGPKVGSFDAGYGSGYLARIVGHKKA 168 (273)
T ss_dssp SSCCCTHHHHH-HHHHHSSSCEEEEECEEEETHHHHHHHHSSEEEEETTCEEECCGGGTTCCCCSTTTHHHHHHHCHHHH
T ss_pred hHHHhhHHHHH-HHHHhCCCCEEEEECCEEeehhHHHHHhCCEEEEcCCCEEECchhhhCCCCchhHHHHHHHHhCHHHH
Confidence 11 11133555 6688999999999999999999999999999999999999999999999997 8999999999999
Q ss_pred HHHHHcCCCcCHHHHHHcCCccEEcCCchHHHHHHHHHHHHHhcCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCC
Q 004972 157 IEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAP 236 (721)
Q Consensus 157 ~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (721)
++|++||++++|+||+++||||+|||++++++++.++|+++++.+|.++
T Consensus 169 ~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~------------------------------- 217 (273)
T 2uzf_A 169 REIWYLCRQYNAQEALDMGLVNTVVPLEKVEDETVQWCKEIMKHSPTAL------------------------------- 217 (273)
T ss_dssp HHHHHTCCCEEHHHHHHHTSSSEEECGGGSHHHHHHHHHHHTTSCHHHH-------------------------------
T ss_pred HHHHHhCCCCCHHHHHHcCCCccccCHHHHHHHHHHHHHHHHhCCHHHH-------------------------------
Confidence 9999999999999999999999999999999999999999999876432
Q ss_pred CChhHHHHHHHHHHhhcCCHHHHHHHHH-HHHHHHhCCHHHHHHHHHHHHhhhhcCCC
Q 004972 237 NMPQHQACLDVIEEGIVHGGYSGVLKEA-KVFKELVMLDTSRGLVHVFFAQRATSKVP 293 (721)
Q Consensus 237 ~~~A~~~~~~~i~~~~~~~~~~~l~~E~-~~~~~~~~s~~~~~~i~aF~~~r~~~~~~ 293 (721)
..+|++++ ...++.++++.|. +.+..++.|+|++|++++|++||+|...+
T Consensus 218 -----~~~K~~l~--~~~~~~~~l~~e~~~~~~~~~~s~d~~egi~af~ekr~p~f~~ 268 (273)
T 2uzf_A 218 -----RFLKAAMN--ADTDGLAGLQQMAGDATLLYYTTDEAKEGRDAFKEKRDPDFDQ 268 (273)
T ss_dssp -----HHHHHHHH--HHHSHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCCCCSS
T ss_pred -----HHHHHHHH--ccCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHhcCCCCCCC
Confidence 23455665 2346789999999 99999999999999999999998887543
No 56
>3oc7_A Enoyl-COA hydratase; seattle structural genomics center for infectious disease, S non-pathogenic mycobacterium species, ortholog; 1.50A {Mycobacterium avium} SCOP: c.14.1.0
Probab=100.00 E-value=1.8e-47 Score=395.98 Aligned_cols=249 Identities=22% Similarity=0.325 Sum_probs=214.7
Q ss_pred CCCCcEEEE----EecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccC
Q 004972 1 MAAPRVTME----VGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHG 75 (721)
Q Consensus 1 m~~~~v~~~----~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~ 75 (721)
|+ +.+.++ . +++|++||||||+ .|++|.+|+.+|.+++++++.|+++|+|||||.|++||+|+|++++.....
T Consensus 5 m~-~~v~~~~~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~ 82 (267)
T 3oc7_A 5 MD-ALVDYAGPAAT-GGPVARLTLNSPHNRNALSTALVSQLHQGLRDASSDPAVRVVVLAHTGGTFCAGADLSEAGSGGS 82 (267)
T ss_dssp CC-SSEEEECHHHH-SSSEEEEEECCGGGTSCBCHHHHHHHHHHHHHHHHCTTCCEEEEEECSSEEECCBC---------
T ss_pred cc-cccCCCCccce-eCCEEEEEecCCCccCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCceeCCcCchhhhhccC
Confidence 45 578888 6 7899999999995 699999999999999999999999999999999999999999999862111
Q ss_pred CCcc----cccchHHHHHHHHHHhhCCCcEEEEECCcccccchHhhhhcCEEEeeCCceEeCcccccCcccc---ccccc
Q 004972 76 AGDV----SLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQRLP 148 (721)
Q Consensus 76 ~~~~----~~~~~~~~~~~~~~l~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~a~~~~pe~~~Gl~P~---~~~l~ 148 (721)
.... ..+......++ ..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|+ +++|+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~ 161 (267)
T 3oc7_A 83 PSSAYDMAVERAREMAALM-RAIVESRLPVIAAIDGHVRAGGFGLVGACDIAVAGPRSSFALTEARIGVAPAIISLTLLP 161 (267)
T ss_dssp --CHHHHHHHHHHHHHHHH-HHHHHCSSCEEEEECSEEETTHHHHHHHSSEEEECTTCEEECCGGGGTCCCTTTHHHHTT
T ss_pred chhhhhhHHHHHHHHHHHH-HHHHhCCCCEEEEEcCeecccchHHHHHCCEEEEcCCCEEeCcccccCCCcchhHHHHHH
Confidence 1111 01233444556 6789999999999999999999999999999999999999999999999997 88999
Q ss_pred cccCHHHHHHHHHcCCCcCHHHHHHcCCccEEcCCchHHHHHHHHHHHHHhcCchhhhhhhccCCCCCcHHHHHHHHHHH
Q 004972 149 RLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLAR 228 (721)
Q Consensus 149 r~~G~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (721)
++|..+|++|++||++++|+||+++||||+| ++++++++.++++++++.+|.+
T Consensus 162 -~vG~~~A~~l~ltg~~~~a~eA~~~GLv~~v--~~~l~~~a~~~a~~la~~~~~a------------------------ 214 (267)
T 3oc7_A 162 -KLSARAAARYYLTGEKFDARRAEEIGLITMA--AEDLDAAIDQLVTDVGRGSPQG------------------------ 214 (267)
T ss_dssp -TSCHHHHHHHHHHCCCBCHHHHHHHTSSSEE--CSSHHHHHHHHHHHHHTSCHHH------------------------
T ss_pred -HhCHHHHHHHHHcCCccCHHHHHHCCChhhh--hHHHHHHHHHHHHHHHhCCHHH------------------------
Confidence 9999999999999999999999999999999 7889999999999999988643
Q ss_pred HHHHHhCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcC
Q 004972 229 LQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 291 (721)
Q Consensus 229 ~~~~~~~~~~~A~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~ 291 (721)
...+|++++.....+++++++.|.+.+..++.|+|++|++++|++||+|++
T Consensus 215 ------------~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~s~d~~eg~~af~ekr~p~f 265 (267)
T 3oc7_A 215 ------------LAASKALTTAAVLERFDRDAERLAEESARLFVSDEAREGMLAFLEKRSPNW 265 (267)
T ss_dssp ------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHTCCCTT
T ss_pred ------------HHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHcCCCCCC
Confidence 335677788877788999999999999999999999999999999998775
No 57
>3t89_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.95A {Escherichia coli} PDB: 3t88_A 4elx_A 4elw_A 4els_A 3h02_A 2iex_A
Probab=100.00 E-value=1.3e-47 Score=399.70 Aligned_cols=254 Identities=24% Similarity=0.346 Sum_probs=212.5
Q ss_pred CCCCcEEEEEec-CcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCC-CCCcCCCCchhhhhccCC-
Q 004972 1 MAAPRVTMEVGN-DGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNG-GRFSGGFDINVFQKVHGA- 76 (721)
Q Consensus 1 m~~~~v~~~~~~-~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g-~~F~aG~Dl~~~~~~~~~- 76 (721)
|.+++|.++. + ++|++||||||+ .|+||.+|+.+|.+++++++.|+++|+|||||.| ++||+|+|++++......
T Consensus 24 ~~~~~v~~~~-~~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~ 102 (289)
T 3t89_A 24 EGFEDIRYEK-STDGIAKITINRPQVRNAFRPLTVKEMIQALADARYDDNIGVIILTGAGDKAFCSGGDQKVRGDYGGYK 102 (289)
T ss_dssp TTCSSEEEEE-ETTSEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSSEEECCBCCC---------
T ss_pred CCCCeEEEEE-ecCCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCCCCccCCCChhhhhccccch
Confidence 3567899999 6 899999999996 6999999999999999999999999999999999 499999999988542211
Q ss_pred CcccccchHHHHHHHHHHhhCCCcEEEEECCcccccchHhhhhcCEEEeeCCceEeCcccccCcccc---ccccccccCH
Q 004972 77 GDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGL 153 (721)
Q Consensus 77 ~~~~~~~~~~~~~~~~~l~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~a~~~~pe~~~Gl~P~---~~~l~r~~G~ 153 (721)
............++ +.+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|+ +++|+|++|.
T Consensus 103 ~~~~~~~~~~~~~~-~~l~~~~kPvIAaV~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~~~~~g~~~L~r~vG~ 181 (289)
T 3t89_A 103 DDSGVHHLNVLDFQ-RQIRTCPKPVVAMVAGYSIGGGHVLHMMCDLTIAADNAIFGQTGPKVGSFDGGWGASYMARIVGQ 181 (289)
T ss_dssp -------CTHHHHH-HHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCSTTTHHHHHHHCH
T ss_pred hhhHHHHHHHHHHH-HHHHcCCCCEEEEECCEeehHHHHHHHhCCEEEEeCCCEEeccccccCCCCCchHHHHHHHhcCH
Confidence 11111112234555 6799999999999999999999999999999999999999999999997664 8999999999
Q ss_pred HHHHHHHHcCCCcCHHHHHHcCCccEEcCCchHHHHHHHHHHHHHhcCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHH
Q 004972 154 SKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKK 233 (721)
Q Consensus 154 ~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (721)
.+|++|++||++++|+||+++||||+|||++++++++.++|++|++.+|.++
T Consensus 182 ~~A~~llltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~A~~la~~~~~a~---------------------------- 233 (289)
T 3t89_A 182 KKAREIWFLCRQYDAKQALDMGLVNTVVPLADLEKETVRWCREMLQNSPMAL---------------------------- 233 (289)
T ss_dssp HHHHHHHHHCCCEEHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSCHHHH----------------------------
T ss_pred HHHHHHHHcCCcccHHHHHHCCCceEeeCHHHHHHHHHHHHHHHHcCCHHHH----------------------------
Confidence 9999999999999999999999999999999999999999999999886432
Q ss_pred hCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcCCC
Q 004972 234 TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 293 (721)
Q Consensus 234 ~~~~~~A~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~~~ 293 (721)
..+|++++.... ......+.|.+.+..++.|+|++|++++|++||+|...+
T Consensus 234 --------~~~K~~l~~~~~-~~~~~~~~e~~~~~~~~~s~d~~Eg~~AF~ekR~P~f~~ 284 (289)
T 3t89_A 234 --------RCLKAALNADCD-GQAGLQELAGNATMLFYMTEEGQEGRNAFNQKRQPDFSK 284 (289)
T ss_dssp --------HHHHHHHHHTTS-HHHHHHHHHHHHHHHHTTSSTTTHHHHHHHTTSCCCCTT
T ss_pred --------HHHHHHHHhhcc-cchHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCCCCCCC
Confidence 345666766543 233444578888889999999999999999999987643
No 58
>1uiy_A Enoyl-COA hydratase; lyase, beta-oxidation, crotonase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.85A {Thermus thermophilus} SCOP: c.14.1.3
Probab=100.00 E-value=1.4e-47 Score=393.86 Aligned_cols=246 Identities=24% Similarity=0.352 Sum_probs=217.7
Q ss_pred EEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhcc--CCCccccc
Q 004972 6 VTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH--GAGDVSLM 82 (721)
Q Consensus 6 v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~--~~~~~~~~ 82 (721)
+.++ +++|++||||||+ .|++|.+|+++|.++++.++.|+++++|||||.|++||+|+|++++.... ........
T Consensus 2 i~~~--~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~ 79 (253)
T 1uiy_A 2 VQVE--KGHVAVVFLNDPERRNPLSPEMALSLLQALDDLEADPGVRAVVLTGRGKAFSAGADLAFLERVTELGAEENYRH 79 (253)
T ss_dssp EEEE--CSSEEEEEECCGGGTCCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCCCHHHHHHHTTSCHHHHHHH
T ss_pred EEEE--eCCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCcccCcChHHHHhcccCCchhHHHH
Confidence 4566 5789999999995 79999999999999999999999999999999999999999999986531 11000000
Q ss_pred chHHHHHHHHHHhhCCCcEEEEECCcccccchHhhhhcCEEEeeCCceEeCcccccCcccc--ccccccccCHHHHHHHH
Q 004972 83 PDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG--TQRLPRLVGLSKAIEMM 160 (721)
Q Consensus 83 ~~~~~~~~~~~l~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~a~~~~pe~~~Gl~P~--~~~l~r~~G~~~a~~l~ 160 (721)
....++++ ..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|+ +++|+|++|..+|++|+
T Consensus 80 ~~~~~~~~-~~i~~~~kPvIAav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~~g~~~l~r~vG~~~a~~l~ 158 (253)
T 1uiy_A 80 SLSLMRLF-HRVYTYPKPTVAAVNGPAVAGGAGLALACDLVVMDEEARLGYTEVKIGFVAALVSVILVRAVGEKAAKDLL 158 (253)
T ss_dssp HHHHHHHH-HHHHHCSSCEEEEECSCEETHHHHHHHTSSEEEEETTCEEECCHHHHTCCCHHHHHHHHHHSCHHHHHHHH
T ss_pred HHHHHHHH-HHHHhCCCCEEEEECCeeeHHHHHHHHhCCEEEEcCCcEEeCcccccCcCCchHHHHHHHHhCHHHHHHHH
Confidence 01134555 6689999999999999999999999999999999999999999999999998 78999999999999999
Q ss_pred HcCCCcCHHHHHHcCCccEEcCCchHHHHHHHHHHHHHhcCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCCChh
Q 004972 161 LLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQ 240 (721)
Q Consensus 161 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A 240 (721)
+||++++|+||+++||||+|+|++++++++.++++++++.+|..
T Consensus 159 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a------------------------------------ 202 (253)
T 1uiy_A 159 LTGRLVEAREAKALGLVNRIAPPGKALEEAKALAEEVAKNAPTS------------------------------------ 202 (253)
T ss_dssp HHCCEEEHHHHHHHTSCSEEECTTCHHHHHHHHHHHHHHSCHHH------------------------------------
T ss_pred HhCCccCHHHHHHCCCcceecChhHHHHHHHHHHHHHHcCCHHH------------------------------------
Confidence 99999999999999999999999999999999999999987642
Q ss_pred HHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhc
Q 004972 241 HQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATS 290 (721)
Q Consensus 241 ~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~ 290 (721)
...+|++++.+...+++++++.|.+.+..++.|+|++|++++|++||+|.
T Consensus 203 ~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~eg~~af~~kr~p~ 252 (253)
T 1uiy_A 203 LRLTKELLLALPGMGLEDGFRLAALANAWVRETGDLAEGIRAFFEKRPPR 252 (253)
T ss_dssp HHHHHHHHHHGGGSCHHHHHHHHHHHHHHGGGCHHHHHHHHHHHTTSCCC
T ss_pred HHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHhCcCCCC
Confidence 33567888888888999999999999999999999999999999998765
No 59
>2a7k_A CARB; crotonase, antibiotic, beta-lactam, biosynthetic protein; 2.24A {Pectobacterium carotovorum} SCOP: c.14.1.3 PDB: 2a81_A*
Probab=100.00 E-value=6.5e-48 Score=395.55 Aligned_cols=244 Identities=24% Similarity=0.305 Sum_probs=197.0
Q ss_pred EEEEEecCcEEEEEeCCC-CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEe-CCCCCcCCCCchhhhhccCCCcccccc
Q 004972 6 VTMEVGNDGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTG-NGGRFSGGFDINVFQKVHGAGDVSLMP 83 (721)
Q Consensus 6 v~~~~~~~~v~~i~l~~p-~~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg-~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 83 (721)
+.++. +++|++|||||| +.|++|.+|+++|.+++++++.|+++|+||||| .|++||+|+|++++...........+.
T Consensus 2 v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 80 (250)
T 2a7k_A 2 VFEEN-SDEVRVITLDHPNKHNPFSRTLETSVKDALARANADDSVRAVVVYGGAERSFSAGGDFNEVKQLSRSEDIEEWI 80 (250)
T ss_dssp EEEEE-ETTEEEEEECCSSTTCBCCHHHHHHHHHHHHHHHHCTTCCEEEEECCTTSCSBCBSCHHHHHTC-CHHHHHHHH
T ss_pred eEEEe-eCCEEEEEecCCCccCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCCccCCcCHHHHhhcCchhhHHHHH
Confidence 67788 789999999999 579999999999999999999999999999999 999999999999986432111001122
Q ss_pred hHHHHHHHHHHhhCCCcEEEEECCcccccchHhhhhcCEEEeeCCceEeCcccccCcccc---ccccccccCHHHHHHHH
Q 004972 84 DVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMM 160 (721)
Q Consensus 84 ~~~~~~~~~~l~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~a~~~~pe~~~Gl~P~---~~~l~r~~G~~~a~~l~ 160 (721)
...++++ ..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|+ + +|+|++|..+|++|+
T Consensus 81 ~~~~~~~-~~i~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~-~l~~~vG~~~a~~l~ 158 (250)
T 2a7k_A 81 DRVIDLY-QAVLNVNKPTIAAVDGYAIGMGFQFALMFDQRLMASTANFVMPELKHGIGCSVGAA-ILGFTHGFSTMQEII 158 (250)
T ss_dssp HHHHHHH-HHHHTCCSCEEEEECSEEETHHHHHHTTSSEEEEETTCEEECCGGGGTCCCHHHHH-HHHHHHCHHHHHHHH
T ss_pred HHHHHHH-HHHHcCCCCEEEEECCeEeHHHHHHHHhCCEEEEcCCCEEeCcccccCCCCCcHHH-HHHHHhHHHHHHHHH
Confidence 2344555 6789999999999999999999999999999999999999999999999997 7 999999999999999
Q ss_pred HcCCCcCHHHHHHcCCccEEcCCchHHHHHHHHHHHHHhcCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCCChh
Q 004972 161 LLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQ 240 (721)
Q Consensus 161 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A 240 (721)
+||++++|+||+++||||+|+|++++++++.++++++++.+|..
T Consensus 159 ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a------------------------------------ 202 (250)
T 2a7k_A 159 YQCQSLDAPRCVDYRLVNQVVESSALLDAAITQAHVMASYPASA------------------------------------ 202 (250)
T ss_dssp HHCCCBCHHHHHHHTCCSEEECHHHHHHHHHHHHHHHHTSCHHH------------------------------------
T ss_pred HcCCcccHHHHHHcCCcceecCHHHHHHHHHHHHHHHHcCCHHH------------------------------------
Confidence 99999999999999999999999999999999999999987642
Q ss_pred HHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhh
Q 004972 241 HQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRA 288 (721)
Q Consensus 241 ~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~ 288 (721)
...+|++++.+...+++++++.|.+.+..++.|+|++|++++|++||+
T Consensus 203 ~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~ 250 (250)
T 2a7k_A 203 FINTKRAVNKPFIHLLEQTRDASKAVHKAAFQARDAQGHFKNVLGKKY 250 (250)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCC--------------------
T ss_pred HHHHHHHHHHhhhcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhcCC
Confidence 234567777777777899999999999999999999999999999874
No 60
>2j5i_A P-hydroxycinnamoyl COA hydratase/lyase; vanillin, aldolase, crotonase, coenzyme-A; 1.8A {Pseudomonas fluorescens} PDB: 2j5i_B 2vss_A* 2j5i_I 2vss_F* 2vsu_A* 2vss_E* 2vsu_F* 2vsu_E* 2vsu_C*
Probab=100.00 E-value=1.3e-47 Score=398.49 Aligned_cols=248 Identities=19% Similarity=0.300 Sum_probs=201.4
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccC--CCc-
Q 004972 3 APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHG--AGD- 78 (721)
Q Consensus 3 ~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~--~~~- 78 (721)
++.+.++. +++|++||||||+ .|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++..... ...
T Consensus 8 ~~~i~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~ 86 (276)
T 2j5i_A 8 WKTVKVEI-EDGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGMDLKEYFREVDAGPEIL 86 (276)
T ss_dssp CSSEEEEE-ETEEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTEEEEEEEESTTCSBCCBCHHHHHHHHHHSCTTH
T ss_pred CceEEEEE-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCCcCCcChhhHhhccccchhHH
Confidence 46788998 7899999999994 799999999999999999999999999999999999999999998753211 110
Q ss_pred ccccchHHHHHHHHHHhhCCCcEEEEECCcccccchHhhhhcCEEEeeCCceEeCcccccCcccc---ccccccccCHHH
Q 004972 79 VSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSK 155 (721)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~a~~~~pe~~~Gl~P~---~~~l~r~~G~~~ 155 (721)
...+.......+...+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|+ +++|+|++|..+
T Consensus 87 ~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~ 166 (276)
T 2j5i_A 87 QEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFSPLVACDLAICADEATFGLSEINWGIPPGNLVSKAMADTVGHRQ 166 (276)
T ss_dssp HHHHHHHHHHHHTTTTTTCSSCEEEEECSCEEGGGHHHHHHSSEEEEETTCEEECGGGGGTCCCCTTHHHHHHHHSCHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCCEEEEECCeeehhHHHHHHhCCEEEEcCCCEEeCcccccCCCCcchHHHHHHHHhCHHH
Confidence 01111111222125578999999999999999999999999999999999999999999999997 899999999999
Q ss_pred HHHHHHcCCCcCHHHHHHcCCccEEcCCchHHHHHHHHHHHHHhcCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhC
Q 004972 156 AIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTA 235 (721)
Q Consensus 156 a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (721)
|++|++||++++|+||+++||||+|||++++++++.++++++++.+|.+
T Consensus 167 A~~l~ltg~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a------------------------------- 215 (276)
T 2j5i_A 167 SLMYIMTGKTFGGQKAAEMGLVNESVPLAQLREVTIELARNLLEKNPVV------------------------------- 215 (276)
T ss_dssp HHHHHHHCCEEEHHHHHHHTSSSEEECHHHHHHHHHHHHHHHHTSCHHH-------------------------------
T ss_pred HHHHHHhCCcccHHHHHHcCCccEeeCHHHHHHHHHHHHHHHHhCCHHH-------------------------------
Confidence 9999999999999999999999999999999999999999999988643
Q ss_pred CCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHH--hCCH-HHHHHHHHHHHhh
Q 004972 236 PNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKEL--VMLD-TSRGLVHVFFAQR 287 (721)
Q Consensus 236 ~~~~A~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~--~~s~-~~~~~i~aF~~~r 287 (721)
...+|++++.+...+++++++.|.+.+..+ +.|+ |++|++++|++||
T Consensus 216 -----~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~s~~d~~eg~~AF~ekr 265 (276)
T 2j5i_A 216 -----LRAAKHGFKRCRELTWEQNEDYLYAKLDQSRLLDTEGGREQGMKQFLDDK 265 (276)
T ss_dssp -----HHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHC----------------
T ss_pred -----HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHhcc
Confidence 335678888888888999999998887776 6799 9999999999998
No 61
>3lao_A Enoyl-COA hydratase/isomerase; alpha-beta sandwich, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Pseudomonas aeruginosa}
Probab=100.00 E-value=3.7e-48 Score=398.82 Aligned_cols=243 Identities=24% Similarity=0.307 Sum_probs=188.3
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccCCCcccc
Q 004972 3 APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSL 81 (721)
Q Consensus 3 ~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~ 81 (721)
++.|.++. +++|++||||||+ .|++|.+|+++|.+++++++.|+++|+|||||.|+.||+|+|++++....... ...
T Consensus 11 ~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~-~~~ 88 (258)
T 3lao_A 11 PGRVTREQ-RGHLFLIGLDRAGKRNAFDSAMLADLALAMGEYERSEESRCAVLFAHGEHFTAGLDLMELAPKLAAS-GFR 88 (258)
T ss_dssp SCCEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCHHHHGGGCBTT-BCC
T ss_pred CCeEEEEE-ECCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCCCcEEEEEECCCCCeecCcCHHHHhhccchh-hHH
Confidence 56799999 7999999999995 69999999999999999999999999999999999999999999987643222 111
Q ss_pred cchHHHHHHHHHH-hhCCCcEEEEECCcccccchHhhhhcCEEEeeCCceEeCcccccCcccc---ccccccccCHHHHH
Q 004972 82 MPDVSVELVVNLI-EDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAI 157 (721)
Q Consensus 82 ~~~~~~~~~~~~l-~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~a~~~~pe~~~Gl~P~---~~~l~r~~G~~~a~ 157 (721)
+.....+.+ ..+ .++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|+ +++|+|++|..+|+
T Consensus 89 ~~~~~~~~~-~~l~~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~ 167 (258)
T 3lao_A 89 YPDGGVDPW-GVVQPRRSKPLVVAVQGTCWTAGIELMLNADIAVAARGTRFAHLEVLRGIPPLGGSTVRFPRAAGWTDAM 167 (258)
T ss_dssp CCTTCCCTT-SCSSSCCCSCEEEEECSEEETHHHHHHHTSSEEEEETTCEEECGGGGTCCCSSCCCCSHHHHHHCHHHHH
T ss_pred HHHHHHHHH-HHHHHhCCCCEEEEECCEeEhHHHHHHHhCCEEEEcCCCEEeCcccccCCCCCccHHHHHHHHhCHHHHH
Confidence 222222334 457 8999999999999999999999999999999999999999999999996 89999999999999
Q ss_pred HHHHcCCCcCHHHHHHcCCccEEcCCchHHHHHHHHHHHHHhcCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCC
Q 004972 158 EMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 237 (721)
Q Consensus 158 ~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (721)
+|++||++++|+||+++||||+|+|++++++++.++|+++++.+|.+
T Consensus 168 ~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a--------------------------------- 214 (258)
T 3lao_A 168 RYILTGDEFDADEALRMRLLTEVVEPGEELARALEYAERIARAAPLA--------------------------------- 214 (258)
T ss_dssp HHHTTCCCEEHHHHHHTTSCSEEECTTCHHHHHHHHHHHHHHSCHHH---------------------------------
T ss_pred HHHHcCCCCCHHHHHHcCCCcEeeChhHHHHHHHHHHHHHHhCCHHH---------------------------------
Confidence 99999999999999999999999999999999999999999988643
Q ss_pred ChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 004972 238 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFF 284 (721)
Q Consensus 238 ~~A~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~ 284 (721)
...+|++++.....+++++++.|.+.+..++.|+|++|++++|+
T Consensus 215 ---~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~eg~~AF~ 258 (258)
T 3lao_A 215 ---VRAALQSAFQGRDEGDDAALSRVNESLAALIGSEDVREGVLAMV 258 (258)
T ss_dssp ---HHHHHHHHHHHTC-------------------------------
T ss_pred ---HHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHhhC
Confidence 34567888888888999999999999999999999999999995
No 62
>2fbm_A Y chromosome chromodomain protein 1, telomeric IS; acetyltransferase, structural genomics, structural genomics consortium, SGC, unknown function; 2.28A {Homo sapiens} SCOP: c.14.1.3
Probab=100.00 E-value=9.1e-48 Score=401.32 Aligned_cols=253 Identities=21% Similarity=0.296 Sum_probs=213.7
Q ss_pred CCCcEEEEEecCcEEEEEeC-CC-CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccCCC--
Q 004972 2 AAPRVTMEVGNDGVAIITLI-NP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAG-- 77 (721)
Q Consensus 2 ~~~~v~~~~~~~~v~~i~l~-~p-~~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~-- 77 (721)
.++.|.++. +++|++|||| || +.|+||.+|+.+|.+++++++.|+. ++|||||.|+.||+|+|++++.......
T Consensus 21 ~~~~v~~~~-~~~v~~itln~rp~~~Nal~~~m~~~L~~al~~~~~d~~-r~vVltg~G~~FcaG~Dl~~~~~~~~~~~~ 98 (291)
T 2fbm_A 21 TYRDIVVKK-EDGFTQIVLSTRSTEKNALNTEVIKEIVNALNSAAADDS-KLVLFSAAGSVFCCGLDFGYFVKHLRNNRN 98 (291)
T ss_dssp CCSSEEEEE-CSSEEEEEECCSSSSTTCBCHHHHHHHHHHHHHHHHSSC-SEEEEEECSSCSBCCBCHHHHHHHHHHCHH
T ss_pred CcceEEEEE-eCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHhcCCC-eEEEEECCCCCccCCcCHHHHHhcccccch
Confidence 356789999 7899999999 68 5799999999999999999998875 9999999999999999999985421111
Q ss_pred -cccccchHHHHHHHHHHhhCCCcEEEEECCcccccchHhhhhcCEEEeeCCceEeCcccccCcccc---ccccccccCH
Q 004972 78 -DVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGL 153 (721)
Q Consensus 78 -~~~~~~~~~~~~~~~~l~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~a~~~~pe~~~Gl~P~---~~~l~r~~G~ 153 (721)
....+......++ ..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|+ +++|+|++|.
T Consensus 99 ~~~~~~~~~~~~~~-~~l~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~ 177 (291)
T 2fbm_A 99 TASLEMVDTIKNFV-NTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGK 177 (291)
T ss_dssp HHHHHHHHHHHHHH-HHHHHCCSCEEEEECSCEETHHHHTGGGSSEEEEETTCEEECCHHHHTCCCCTTHHHHHHHHHCH
T ss_pred hHHHHHHHHHHHHH-HHHHhCCCCEEEEECCeeecHHHHHHHhCCEEEEeCCCEEECcHHhcCCCCcccHHHHHHHHHhH
Confidence 0111222334555 6689999999999999999999999999999999999999999999999997 8999999999
Q ss_pred HHHHHHHHcCCCcCHHHHHHcCCccEEcCCchHHHHHHHHHHHHHhcCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHH
Q 004972 154 SKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKK 233 (721)
Q Consensus 154 ~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (721)
.+|++|++||++++|+||+++||||+|||++++.+++.++|++|++.+|.+
T Consensus 178 ~~A~el~ltg~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~a~~la~~~p~a----------------------------- 228 (291)
T 2fbm_A 178 ASANEMLIAGRKLTAREACAKGLVSQVFLTGTFTQEVMIQIKELASYNPIV----------------------------- 228 (291)
T ss_dssp HHHHHHHTSCCEEEHHHHHHTTSCSEEECSTTSHHHHHHHHHHHTTSCHHH-----------------------------
T ss_pred HHHHHHHHcCCccCHHHHHHCCCcceecChhHHHHHHHHHHHHHHhCCHHH-----------------------------
Confidence 999999999999999999999999999999999999999999999987643
Q ss_pred hCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHH-HHhhhhcCCC
Q 004972 234 TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVF-FAQRATSKVP 293 (721)
Q Consensus 234 ~~~~~~A~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF-~~~r~~~~~~ 293 (721)
...+|++++.....+++++++.|.+.+..++.|+|++|++.+| ++||+|...+
T Consensus 229 -------~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~Af~~ekR~P~f~~ 282 (291)
T 2fbm_A 229 -------LEECKALVRCNIKLELEQANERECEVLRKIWSSAQGIESMLKIPLLGYKAAFPP 282 (291)
T ss_dssp -------HHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHTSHHHHHHHHTC-----------
T ss_pred -------HHHHHHHHHhhhccCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhcCCCCCCCC
Confidence 2355777877777778999999999999999999999999999 9999987543
No 63
>2gtr_A CDY-like, chromodomain Y-like protein; structural genomics, structural genomics consortium, SGC, unknown function; 1.90A {Homo sapiens} PDB: 2fw2_A
Probab=100.00 E-value=1.1e-47 Score=396.23 Aligned_cols=249 Identities=20% Similarity=0.282 Sum_probs=219.0
Q ss_pred CCcEEEEEecCcEEEEEeC-CC-CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccCCC---
Q 004972 3 APRVTMEVGNDGVAIITLI-NP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAG--- 77 (721)
Q Consensus 3 ~~~v~~~~~~~~v~~i~l~-~p-~~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~--- 77 (721)
++++.++. +++|++|||| || +.|++|.+|+.+|.+++++++.|+ +++|||||.|++||+|+|++++.......
T Consensus 4 ~~~i~~~~-~~~v~~itln~rp~~~Nal~~~~~~~L~~al~~~~~d~-~r~vvltg~g~~F~aG~Dl~~~~~~~~~~~~~ 81 (261)
T 2gtr_A 4 YRDIVVRK-QDGFTHILLSTKSSENNSLNPEVMREVQSALSTAAADD-SKLVLLSAVGSVFCCGLDFIYFIRRLTDDRKR 81 (261)
T ss_dssp CSSEEEEE-ETTEEEEEECCSSSSTTEECHHHHHHHHHHHHHHHHSS-CSCEEEEESSSCSBCEECHHHHHHHHHHCHHH
T ss_pred cceEEEEE-eCCEEEEEECCCCccCCCCCHHHHHHHHHHHHHHhcCC-CEEEEEecCCCccccccCchhhhhccccchhh
Confidence 56789998 7899999999 58 579999999999999999999887 49999999999999999999885421111
Q ss_pred cccccchHHHHHHHHHHhhCCCcEEEEECCcccccchHhhhhcCEEEeeCCceEeCcccccCcccc---ccccccccCHH
Q 004972 78 DVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLS 154 (721)
Q Consensus 78 ~~~~~~~~~~~~~~~~l~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~a~~~~pe~~~Gl~P~---~~~l~r~~G~~ 154 (721)
....+....+.++ ..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|+ +++|++++|..
T Consensus 82 ~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~ 160 (261)
T 2gtr_A 82 ESTKMAEAIRNFV-NTFIQFKKPIIVAVNGPAIGLGASILPLCDVVWANEKAWFQTPYTTFGQSPDGCSTVMFPKIMGGA 160 (261)
T ss_dssp HHHHHHHHHHHHH-HHHHHCCSCEEEEECSCEETHHHHTGGGSSEEEEETTCEEECCTTTTTCCCCTTHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHHH-HHHHhCCCCEEEEECCeEeeHHHHHHHhCCEEEEcCCCEEeCchhccCCCccchHHHHHHHHcCHH
Confidence 0111222334555 6689999999999999999999999999999999999999999999999997 88999999999
Q ss_pred HHHHHHHcCCCcCHHHHHHcCCccEEcCCchHHHHHHHHHHHHHhcCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHh
Q 004972 155 KAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKT 234 (721)
Q Consensus 155 ~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (721)
+|++|++||++++|+||+++||||+|||++++.+++.++++++++.+|..
T Consensus 161 ~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a------------------------------ 210 (261)
T 2gtr_A 161 SANEMLLSGRKLTAQEACGKGLVSQVFWPGTFTQEVMVRIKELASCNPVV------------------------------ 210 (261)
T ss_dssp HHHHHHHHCCCEEHHHHHHTTSCSEEECGGGHHHHHHHHHHHHHTSCHHH------------------------------
T ss_pred HHHHHHHcCCCCCHHHHHHCCCcccccChhHHHHHHHHHHHHHHhCCHHH------------------------------
Confidence 99999999999999999999999999999999999999999999987643
Q ss_pred CCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhc
Q 004972 235 APNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATS 290 (721)
Q Consensus 235 ~~~~~A~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~ 290 (721)
...+|++++.....+++++++.|.+.+..++.|+|++|++.+|++||+|.
T Consensus 211 ------~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~s~d~~eg~~af~ekr~P~ 260 (261)
T 2gtr_A 211 ------LEESKALVRCNMKMELEQANERECEVLKKIWGSAQGMDSMLKYLQRKIDE 260 (261)
T ss_dssp ------HHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHSTTTTHHHHHHHHHHHHC
T ss_pred ------HHHHHHHHHhccccCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHccCCCC
Confidence 23556778777777789999999999999999999999999999999886
No 64
>1mj3_A Enoyl-COA hydratase, mitochondrial; homohexamer, lyase; HET: HXC; 2.10A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2dub_A* 1dub_A* 1ey3_A* 2hw5_A*
Probab=100.00 E-value=2.3e-47 Score=393.35 Aligned_cols=250 Identities=32% Similarity=0.417 Sum_probs=219.6
Q ss_pred CCCcEEEEEe--cCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccCCCc
Q 004972 2 AAPRVTMEVG--NDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGD 78 (721)
Q Consensus 2 ~~~~v~~~~~--~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~~ 78 (721)
+++.+.++.. .++|++||||||+ .|++|.+|+++|.+++++++.|+++++|||||.|++||+|+|++++.......
T Consensus 2 ~~~~~~~~~~v~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~- 80 (260)
T 1mj3_A 2 NFQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEMQNRTFQD- 80 (260)
T ss_dssp CCSSEEEEEESGGGCEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECCSSEEECCBCHHHHTTCCHHH-
T ss_pred CcccceeecccCcCCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHHhCCCeeEEEEECCCCCccCCcChHhhhcccchH-
Confidence 3567777762 5789999999995 79999999999999999999999999999999999999999999875321100
Q ss_pred ccccchHHHHHHHHHHhhCCCcEEEEECCcccccchHhhhhcCEEEeeCCceEeCcccccCcccc---ccccccccCHHH
Q 004972 79 VSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSK 155 (721)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~a~~~~pe~~~Gl~P~---~~~l~r~~G~~~ 155 (721)
.....+...+ ..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|+ +++|+|++|..+
T Consensus 81 --~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~ 157 (260)
T 1mj3_A 81 --CYSGKFLSHW-DHITRIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSL 157 (260)
T ss_dssp --HHHC--CCGG-GGGGGCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCSSTTTHHHHHHCHHH
T ss_pred --HHHHHHHHHH-HHHHhCCCCEEEEECCEEEeHHHHHHHhCCEEEEcCCCEEeCcccccCCCCCccHHHHHHHHhCHHH
Confidence 0000011123 4578999999999999999999999999999999999999999999999997 889999999999
Q ss_pred HHHHHHcCCCcCHHHHHHcCCccEEcCCchHHHHHHHHHHHHHhcCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhC
Q 004972 156 AIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTA 235 (721)
Q Consensus 156 a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (721)
|++|++||++++|+||+++||||+|+|++++++++.++++++++.+|.
T Consensus 158 a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~-------------------------------- 205 (260)
T 1mj3_A 158 AMEMVLTGDRISAQDAKQAGLVSKIFPVETLVEEAIQCAEKIANNSKI-------------------------------- 205 (260)
T ss_dssp HHHHHHHCCCEEHHHHHHHTSCSEEECTTTHHHHHHHHHHHHHHSCHH--------------------------------
T ss_pred HHHHHHcCCcCCHHHHHHcCCccEEeChHHHHHHHHHHHHHHHcCCHH--------------------------------
Confidence 999999999999999999999999999999999999999999998864
Q ss_pred CCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcC
Q 004972 236 PNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 291 (721)
Q Consensus 236 ~~~~A~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~ 291 (721)
|...+|++++.+...+++++++.|.+.+..++.|+|++|++++|++||+|.+
T Consensus 206 ----a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~egi~af~~kr~p~~ 257 (260)
T 1mj3_A 206 ----IVAMAKESVNAAFEMTLTEGNKLEKKLFYSTFATDDRREGMSAFVEKRKANF 257 (260)
T ss_dssp ----HHHHHHHHHHGGGSSCHHHHHHHHHHHHHHGGGSHHHHHHHHHHHTTSCCCC
T ss_pred ----HHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHcCCCCCC
Confidence 2335678888888889999999999999999999999999999999988764
No 65
>3t8b_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.65A {Mycobacterium tuberculosis} PDB: 3t8a_A 1rjm_A* 1rjn_A* 1q52_A 1q51_A
Probab=100.00 E-value=1.3e-47 Score=405.80 Aligned_cols=253 Identities=23% Similarity=0.274 Sum_probs=183.6
Q ss_pred CCcEEEEEe-cCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCC-------CCcCCCCchhhhhc
Q 004972 3 APRVTMEVG-NDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGG-------RFSGGFDINVFQKV 73 (721)
Q Consensus 3 ~~~v~~~~~-~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~-------~F~aG~Dl~~~~~~ 73 (721)
++.|+++++ +++|++||||||+ .|+||.+|+++|.++++.++.|+++|+|||||.|+ .||+|+|++++...
T Consensus 54 ~~~i~~~~~~~~gVa~ItlnrP~~~NAl~~~~~~eL~~al~~~~~d~~vrvVVltG~G~~~~~~~~~FcaG~Dl~~~~~~ 133 (334)
T 3t8b_A 54 LTDITYHRHVDDATVRVAFNRPEVRNAFRPHTVDELYRVLDHARMSPDVGVVLLTGNGPSPKDGGWAFCSGGDQRIRGRS 133 (334)
T ss_dssp CSSEEEEEESSSSEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEECCCCTTTCCCEEECCSCTTTTC--
T ss_pred CceEEEEEeccCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEeCCCCCcCCCCCcccCCCCHHHhhcc
Confidence 567999983 4899999999996 69999999999999999999999999999999996 89999999987432
Q ss_pred cCC----------CcccccchHHHHHHHHHHhhCCCcEEEEECCcccccchHhhhhcCEEEee-CCceEeCcccccCccc
Q 004972 74 HGA----------GDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA-PKTQLGLPELTLGVIP 142 (721)
Q Consensus 74 ~~~----------~~~~~~~~~~~~~~~~~l~~~~~p~Iaav~G~a~GgG~~lalacD~ria~-~~a~~~~pe~~~Gl~P 142 (721)
... ............++ +.|.++||||||+|||+|+|||++|+++||+|||+ ++++|++||+++|++|
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~kPvIAaV~G~A~GgG~~LalacD~riAs~~~A~f~~pe~~lGl~p 212 (334)
T 3t8b_A 134 GYQYASGDTADTVDVARAGRLHILEVQ-RLIRFMPKVVICLVNGWAAGGGHSLHVVCDLTLASREYARFKQTDADVGSFD 212 (334)
T ss_dssp --------------------CCHHHHH-HHHHHSSSEEEEEECSEEETHHHHHHHHSSEEEEETTTCEEECCCTTCSSSS
T ss_pred cccccccccchhhhHHHHHHHHHHHHH-HHHHhCCCCEEEEECCccccCcchhHhhCCEEEEeCCCcEEECcccccCCCC
Confidence 110 00011111233455 67899999999999999999999999999999999 9999999999999999
Q ss_pred c---ccccccccCHHHHHHHHHcCCCcCHHHHHHcCCccEEcCCchHHHHHHHHHHHHHhcCchhhhhhhccCCCCCcHH
Q 004972 143 G---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSE 219 (721)
Q Consensus 143 ~---~~~l~r~~G~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~ 219 (721)
+ +++|+|++|..+|++|++||++++|+||+++||||+|||++++++++.++|++|++.+|.+
T Consensus 213 ~~gg~~~L~r~vG~~~A~ellltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~A~~ia~~~p~a--------------- 277 (334)
T 3t8b_A 213 GGYGSAYLARQVGQKFAREIFFLGRTYTAEQMHQMGAVNAVAEHAELETVGLQWAAEINAKSPQA--------------- 277 (334)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSCHHH---------------
T ss_pred cccHHHHHHHHhhHHHHHHHHHhCCcCCHHHHHHCCCCcEecCHHHHHHHHHHHHHHHHhCCHHH---------------
Confidence 7 8999999999999999999999999999999999999999999999999999999988753
Q ss_pred HHHHHHHHHHHHHHhCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcCCC
Q 004972 220 AREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 293 (721)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~~~ 293 (721)
...+|++++.... .+...+..|.+.+..++.|+|++|++.+|++||+|...+
T Consensus 278 ---------------------~~~~K~~l~~~~~-~~~~~~~~e~~~~~~~~~s~d~~Eg~~AFleKR~P~f~~ 329 (334)
T 3t8b_A 278 ---------------------QRMLKFAFNLLDD-GLVGQQLFAGEATRLAYMTDEAVEGRDAFLQKRPPDWSP 329 (334)
T ss_dssp ---------------------HHHHHHHHHHTCC-CC-------------------------------------
T ss_pred ---------------------HHHHHHHHHhhhc-chHHHHHHHHHHHHHHhcCHHHHHHHHHHHcCCCCCCCC
Confidence 2345667776543 455566788888899999999999999999999987643
No 66
>3h0u_A Putative enoyl-COA hydratase; structural genomics, isomerase, PSI-2, protein structure initiative; 1.50A {Streptomyces avermitilis}
Probab=100.00 E-value=3.4e-47 Score=396.58 Aligned_cols=244 Identities=20% Similarity=0.276 Sum_probs=218.3
Q ss_pred CCcEEEEEecCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CcCCCCchhhhhccCCCc--c
Q 004972 3 APRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR-FSGGFDINVFQKVHGAGD--V 79 (721)
Q Consensus 3 ~~~v~~~~~~~~v~~i~l~~p~~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~-F~aG~Dl~~~~~~~~~~~--~ 79 (721)
++.|.++. +++|++||||||+.|+||.+|+.+|.++++.++.|+++|+|||||.|+. ||+|+|++++........ .
T Consensus 7 ~~~v~~~~-~~~Va~itlnrP~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~ff~~G~Dl~~~~~~~~~~~~~~ 85 (289)
T 3h0u_A 7 YETIKARL-DGTVLSATFNAPPMNLIGPEVVRDLVALLEELAHPTAPRVVIFDSADADFFFPHVDMTKVPEYTAEAAKAG 85 (289)
T ss_dssp CSSEEEEE-ETTEEEEEECCTTTCCBCHHHHHHHHHHHHHTTSTTSCSEEEEEECSSSEEECSBCTTCHHHHHHHHHTTS
T ss_pred CCeEEEEE-ECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCceeCCcCHHHHhhcCcchhhhH
Confidence 67899999 7999999999999999999999999999999999999999999999865 556779998865321110 0
Q ss_pred cccchHHHHHHHHHHhhCCCcEEEEECCcccccchHhhhhcCEEEeeCC-ceEeCcccccCcccc---ccccccccCHHH
Q 004972 80 SLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPK-TQLGLPELTLGVIPG---TQRLPRLVGLSK 155 (721)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~-a~~~~pe~~~Gl~P~---~~~l~r~~G~~~ 155 (721)
..+.....+++ .++.++||||||+|||+|+|||++|+++||+|||+++ ++|++||+++|++|+ +++|+|++|..+
T Consensus 86 ~~~~~~~~~~~-~~l~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~~~ 164 (289)
T 3h0u_A 86 GPGDASLGMLF-RKLSQLPAVTIAKLRGRARGAGSEFLLACDMRFASRENAILGQPEVGIGAPPGAGAIQHLTRLLGRGR 164 (289)
T ss_dssp STTCCSHHHHH-HHHHTCSSEEEEEECSEEETHHHHHHHHSSEEEEETTTCEEECTHHHHTSCCCSSHHHHHHHHHCHHH
T ss_pred HHHHHHHHHHH-HHHHhCCCCEEEEECCEeehhhHHHHHhCCEEEEeCCCcEEeCchhhcCCCCCccHHHHHHHHhCHHH
Confidence 12233455666 6799999999999999999999999999999999998 999999999999997 899999999999
Q ss_pred HHHHHHcCCCcCHHHHHHcCCccEEcCCchHHHHHHHHHHHHHhcCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhC
Q 004972 156 AIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTA 235 (721)
Q Consensus 156 a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (721)
|++|++||++++|+||+++||||+|||++++++++.++|++|++.+|.+
T Consensus 165 A~ellltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~lA~~la~~~p~a------------------------------- 213 (289)
T 3h0u_A 165 ALEAVLTSSDFDADLAERYGWVNRAVPDAELDEFVAGIAARMSGFPRDA------------------------------- 213 (289)
T ss_dssp HHHHHHHCCCEEHHHHHHHTSSSEEECHHHHHHHHHHHHHHHHTSCHHH-------------------------------
T ss_pred HHHHHHcCCCCCHHHHHHCCCccEecCHHHHHHHHHHHHHHHHhCCHHH-------------------------------
Confidence 9999999999999999999999999999999999999999999988643
Q ss_pred CCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 004972 236 PNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFA 285 (721)
Q Consensus 236 ~~~~A~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~ 285 (721)
...+|++++.... +++++++.|.+.+..++.|+|++|++++|++
T Consensus 214 -----~~~~K~~l~~~~~-~l~~~l~~e~~~~~~~~~s~d~~egi~AFle 257 (289)
T 3h0u_A 214 -----LIAAKSAINAISL-PAPAEVRADAALFQQLVRGEKVQQRTAELFK 257 (289)
T ss_dssp -----HHHHHHHHHHHHS-CCHHHHHHHHHHHHHHTTSHHHHHHHHHHHH
T ss_pred -----HHHHHHHHHhhcc-cHHHHHHHHHHHHHHHhCCHHHHHHHHHHhC
Confidence 3356778888777 8999999999999999999999999999999
No 67
>3isa_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2, protein structure initiative, EN hydratase; 1.76A {Bordetella parapertussis}
Probab=100.00 E-value=1.8e-47 Score=392.56 Aligned_cols=242 Identities=19% Similarity=0.299 Sum_probs=204.6
Q ss_pred cEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccCCCcccccc
Q 004972 5 RVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMP 83 (721)
Q Consensus 5 ~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 83 (721)
.|.++. +++|++||||||+ .|++|.+|+++|.++++.+++ +++|+|||||.|++||+|+|++++....... .....
T Consensus 8 ~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~-~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~-~~~~~ 84 (254)
T 3isa_A 8 PLAIER-RPAAWTFTLSRPEKRNALSAELVEALIDGVDAAHR-EQVPLLVFAGAGRNFSAGFDFTDYETQSEGD-LLLRM 84 (254)
T ss_dssp SEEEEE-CSSEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHH-TTCSEEEEEESTTCSCCCBCCTTCTTSCHHH-HHHHH
T ss_pred eEEEEE-ECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEECCCCceeeCcChHHhhccCchh-HHHHH
Confidence 388999 8999999999995 899999999999999999986 5899999999999999999999986432111 11111
Q ss_pred hHHHHHHHHHHhhCCCcEEEEECCcccccchHhhhhcCEEEeeCCceEeCcccccCccccccccccccCHHHHHHHHHcC
Q 004972 84 DVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGTQRLPRLVGLSKAIEMMLLS 163 (721)
Q Consensus 84 ~~~~~~~~~~l~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~a~~~~pe~~~Gl~P~~~~l~r~~G~~~a~~l~ltg 163 (721)
...+.++ ..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++++|+|++|..+|++|++||
T Consensus 85 ~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~pg~~~l~~~vG~~~A~~l~ltg 163 (254)
T 3isa_A 85 VRIEMLL-QRVAGSPSLTLALAHGRNFGAGVDLFAACKWRYCTPEAGFRMPGLKFGLVLGTRRFRDIVGADQALSILGSA 163 (254)
T ss_dssp HHHHHHH-HHHHTCSSEEEEEECSEEETHHHHHHHHSSEEEECTTCEEECCGGGGTCCCSHHHHHHHHCHHHHHHHHTTT
T ss_pred HHHHHHH-HHHHhCCCCEEEEECCeEeecchhHHHhCCEEEEcCCCEEECchhccCccHHHHHHHHHcCHHHHHHHHHhC
Confidence 2234555 679999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCHHHHHHcCCccEEcCCchHHHHHHHHHHHHHhcCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCCChhHHH
Q 004972 164 KSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQA 243 (721)
Q Consensus 164 ~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~ 243 (721)
++++|+||+++||||+|||++++.+++.++++++++.++.+++ .
T Consensus 164 ~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~------------------------------------~ 207 (254)
T 3isa_A 164 RAFDADEARRIGFVRDCAAQAQWPALIDAAAEAATALDPATRA------------------------------------T 207 (254)
T ss_dssp CEEEHHHHHHTTSSSEECCGGGHHHHHHHHHHHHTTSCHHHHH------------------------------------H
T ss_pred CCCcHHHHHHCCCccEEeChhHHHHHHHHHHHHHHcCCHHHHH------------------------------------H
Confidence 9999999999999999999999999999999999998864322 3
Q ss_pred HHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcCCC
Q 004972 244 CLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 293 (721)
Q Consensus 244 ~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~~~ 293 (721)
+|+++. .+.++.|.+.+..++.|+|++|++.+|++||++.+.+
T Consensus 208 ~K~~l~-------~~~~~~e~~~~~~~~~s~d~~egi~af~ekr~p~~~~ 250 (254)
T 3isa_A 208 LHRVLR-------DDHDDADLAALARSAAQPGFKARIRDYLAQPAAEGHH 250 (254)
T ss_dssp HHHHHS-------CCCHHHHHHHHHHHHHSTTHHHHHHHHHHC-------
T ss_pred HHHHHh-------hhhHHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCCC
Confidence 344442 1234678888999999999999999999999999865
No 68
>3pe8_A Enoyl-COA hydratase; emerald biostructures, structural genomics, seattle structur genomics center for infectious disease, ssgcid, lyase; 1.60A {Mycobacterium smegmatis} PDB: 3p85_A* 3qyr_A
Probab=100.00 E-value=1.1e-47 Score=393.77 Aligned_cols=241 Identities=24% Similarity=0.367 Sum_probs=197.0
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccCCCcccc
Q 004972 3 APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSL 81 (721)
Q Consensus 3 ~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~ 81 (721)
++.+.++. +++|++||||||+ .|++|.+|+.+|.+++++++.|+++|+|||||.|++||+|+|++++....
T Consensus 8 ~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vvltg~g~~F~aG~Dl~~~~~~~------- 79 (256)
T 3pe8_A 8 SPVLLVDT-TDRVRTLTLNRPQSRNALSAELRSTFFRALSDAQNDDDVDVVIVTGADPVFCAGLDLKELGDTT------- 79 (256)
T ss_dssp CCSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCSEEEEEESTTCSBCCBCTTTC-----------
T ss_pred CCcEEEEE-ECCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCccCCcCHHHHhhhH-------
Confidence 56799999 7999999999995 69999999999999999999999999999999999999999999885421
Q ss_pred cchHHHHHHHHHHhhCCCcEEEEECCcccccchHhhhhcCEEEeeCCceEeCcccccCcccc---ccccccccCHHHHHH
Q 004972 82 MPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIE 158 (721)
Q Consensus 82 ~~~~~~~~~~~~l~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~a~~~~pe~~~Gl~P~---~~~l~r~~G~~~a~~ 158 (721)
...... ..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|+ +++|+|++|..+|++
T Consensus 80 ---~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~ 155 (256)
T 3pe8_A 80 ---ELPDIS-PKWPDMTKPVIGAINGAAVTGGLELALYCDILIASENAKFADTHARVGLMPTWGLSVRLPQKVGVGLARR 155 (256)
T ss_dssp --------C-CCCCCCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCSSHHHHHHHHHCHHHHHH
T ss_pred ---HHHHHH-HHHHhCCCCEEEEECCeeechHHHHHHhCCEEEEcCCCEEECchhhhCCCCcccHHHHHHHhcCHHHHHH
Confidence 111222 4578999999999999999999999999999999999999999999999997 899999999999999
Q ss_pred HHHcCCCcCHHHHHHcCCccEEcCCchHHHHHHHHHHHHHhcCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCCC
Q 004972 159 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 238 (721)
Q Consensus 159 l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (721)
|++||++++|+||+++||||+|+|++++++++.++|+++++.+|.+
T Consensus 156 l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a---------------------------------- 201 (256)
T 3pe8_A 156 MSLTGDYLSAQDALRAGLVTEVVAHDDLLTAARRVAASIVGNNQKA---------------------------------- 201 (256)
T ss_dssp HHHHCCCEEHHHHHHHTSCSCEECGGGHHHHHHHHHHHHHTSCHHH----------------------------------
T ss_pred HHHcCCCCCHHHHHHCCCCeEEeCHhHHHHHHHHHHHHHHcCCHHH----------------------------------
Confidence 9999999999999999999999999999999999999999988643
Q ss_pred hhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHH---hCCHHHHHHHHHHHHhhhhcC
Q 004972 239 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKEL---VMLDTSRGLVHVFFAQRATSK 291 (721)
Q Consensus 239 ~A~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~---~~s~~~~~~i~aF~~~r~~~~ 291 (721)
...+|++++.+...+++++++.|.+.+..+ ..++|+++++.+|++|+++.+
T Consensus 202 --~~~~K~~~~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~e~~~aflek~k~~~ 255 (256)
T 3pe8_A 202 --VRALLDSYHRIDALQTGGALWAEAEAARQWMRSTSGDDIAASRASVIERGRSQV 255 (256)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--------------------
T ss_pred --HHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHhccCccC
Confidence 335677888888888999999999997654 677788999999999999864
No 69
>3he2_A Enoyl-COA hydratase ECHA6; fatty acid metabolism, lipid metabolism, lyase, structural genomics; HET: PGE; 2.30A {Mycobacterium tuberculosis}
Probab=100.00 E-value=6.5e-47 Score=388.61 Aligned_cols=239 Identities=26% Similarity=0.361 Sum_probs=206.4
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccCCCcccc
Q 004972 3 APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSL 81 (721)
Q Consensus 3 ~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~ 81 (721)
++.|.++. +++|++||||||+ .|+||.+|+.+|.++++++++| ++|+|||||.|+.||+|+|++... ....
T Consensus 20 ~~~i~~~~-~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d-~vr~vVltg~G~~FcaG~Dl~~~~------~~~~ 91 (264)
T 3he2_A 20 GSMIGITQ-AEAVLTIELQRPERRNALNSQLVEELTQAIRKAGDG-SARAIVLTGQGTAFCAGADLSGDA------FAAD 91 (264)
T ss_dssp --CEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHCC----CCSEEEEEESSSCSBCCBCCTTCT------TGGG
T ss_pred CCeEEEEE-ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHhhC-CceEEEEECCCCCccCCcCCccch------hhHH
Confidence 35688999 7999999999995 7999999999999999999988 999999999999999999998311 1122
Q ss_pred cchHHHHHHHHHHhhCCCcEEEEECCcccccchHhhhhcCEEEeeCCceEeCcccccCcccc---ccccccccCHHHHHH
Q 004972 82 MPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIE 158 (721)
Q Consensus 82 ~~~~~~~~~~~~l~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~a~~~~pe~~~Gl~P~---~~~l~r~~G~~~a~~ 158 (721)
+.....+++ ..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|+ +++|+|++|..+|++
T Consensus 92 ~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~ 170 (264)
T 3he2_A 92 YPDRLIELH-KAMDASPMPVVGAINGPAIGAGLQLAMQCDLRVVAPDAFFQFPTSKYGLALDNWSIRRLSSLVGHGRARA 170 (264)
T ss_dssp HHHHHHHHH-HHHHHCSSCEEEEECSCEETHHHHHHHHSSEEEECTTCEEECTHHHHTCCCCHHHHHHHHHHHCHHHHHH
T ss_pred HHHHHHHHH-HHHHhCCCCEEEEECCcEEcchhHHHHhCCEEEEcCCCEEECcccccCcCCcchHHHHHHHHhCHHHHHH
Confidence 333445566 6799999999999999999999999999999999999999999999999997 899999999999999
Q ss_pred HHHcCCCcCHHHHHHcCCccEEcCCchHHHHHHHHHHHHHhcCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCCC
Q 004972 159 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 238 (721)
Q Consensus 159 l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (721)
|++||++++|+||+++||||+|++ .+++.++|+++++.+|.+
T Consensus 171 llltG~~i~A~eA~~~GLV~~v~~----~~~a~~~A~~la~~~p~a---------------------------------- 212 (264)
T 3he2_A 171 MLLSAEKLTAEIALHTGMANRIGT----LADAQAWAAEIARLAPLA---------------------------------- 212 (264)
T ss_dssp HHHHCCCEEHHHHHHHTSCSEECC----HHHHHHHHHHHHTSCHHH----------------------------------
T ss_pred HHHcCCCccHHHHHHCCCeEEEec----HHHHHHHHHHHHcCCHHH----------------------------------
Confidence 999999999999999999999996 467899999999988643
Q ss_pred hhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcCC
Q 004972 239 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 292 (721)
Q Consensus 239 ~A~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~~ 292 (721)
...+|++++.. .+++++++.|.+.+..++.|+|++|++.+|++||+|...
T Consensus 213 --~~~~K~~l~~~--~~~~~~~~~e~~~~~~~~~s~d~~Eg~~AF~ekR~P~f~ 262 (264)
T 3he2_A 213 --IQHAKRVLNDD--GAIEEAWPAHKELFDKAWGSQDVIEAQVARMEKRPPKFQ 262 (264)
T ss_dssp --HHHHHHHHHTS--SCSCCCCHHHHHHHHHHHTSHHHHHHHHHHHTTSCCCCC
T ss_pred --HHHHHHHHHcc--CCHHHHHHHHHHHHHHHhCCHHHHHHHHHHhcCCCCCCC
Confidence 23456777765 345677888999999999999999999999999998753
No 70
>4di1_A Enoyl-COA hydratase ECHA17; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis, ortholog; 2.25A {Mycobacterium marinum}
Probab=100.00 E-value=8.2e-47 Score=390.97 Aligned_cols=240 Identities=28% Similarity=0.441 Sum_probs=212.2
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccCCCccc
Q 004972 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVS 80 (721)
Q Consensus 1 m~~~~v~~~~~~~~v~~i~l~~p~~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~ 80 (721)
|+ +.|.++. +++|++||||||+.|+||.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++..... ....
T Consensus 22 m~-~~v~~~~-~~~Va~ItlnrP~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~-~~~~ 98 (277)
T 4di1_A 22 MN-EFVSVVA-DQGLATLVVSRPPTNAMTRQVYREIVAAADELGRRDDIGAVVLFGGHEIFSAGDDMPELRTLNA-PEAD 98 (277)
T ss_dssp -C-CSEEEEE-ETTEEEEEECCTTTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECCSSCSBCCBCHHHHHTCCH-HHHH
T ss_pred CC-ceEEEEE-ECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCEecCcCcccccccCh-HHHH
Confidence 44 5789999 7999999999996699999999999999999999999999999999999999999999865321 1122
Q ss_pred ccchHHHHHHHHHHhhCCCcEEEEECCcccccchHhhhhcCEEEeeCCceEeCcccccCcccc---ccccccccCHHHHH
Q 004972 81 LMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAI 157 (721)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~a~~~~pe~~~Gl~P~---~~~l~r~~G~~~a~ 157 (721)
.+......++ ..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|+ +++|+|++|..+|+
T Consensus 99 ~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~~~A~ 177 (277)
T 4di1_A 99 TAARVRLEAI-DAVAAIPKPTVAAVTGYALGAGLTLALAADWRVSGDNVKFGATEILAGLIPGGGGMGRLTRVVGSSRAK 177 (277)
T ss_dssp HHHHHHHHHH-HHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCTTHHHHHHHHHCHHHHH
T ss_pred HHHHHHHHHH-HHHHhCCCCEEEEECCeEehhHHHHHHhCCEEEEcCCCEEECcccccCCCCCchHHHHHHHHhCHHHHH
Confidence 2233444566 6799999999999999999999999999999999999999999999999997 89999999999999
Q ss_pred HHHHcCCCcCHHHHHHcCCccEEcCCchHHHHHHHHHHHHHhcCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCC
Q 004972 158 EMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 237 (721)
Q Consensus 158 ~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (721)
+|++||++++|+||+++||||+|+|++++++++.++|+++++.+|.
T Consensus 178 ~llltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~a~~la~~~~~---------------------------------- 223 (277)
T 4di1_A 178 ELVFSGRFFDAEEALALGLIDDMVAPDDVYDSAVAWARRYLECPPR---------------------------------- 223 (277)
T ss_dssp HHHHHCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHTTTTSCHH----------------------------------
T ss_pred HHHHcCCCCCHHHHHHCCCccEEeChhHHHHHHHHHHHHHHcCCHH----------------------------------
Confidence 9999999999999999999999999999999999999999998764
Q ss_pred ChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhc
Q 004972 238 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATS 290 (721)
Q Consensus 238 ~~A~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~ 290 (721)
|+..+|++++.+...+++++++.|.+.+..++.|+ +||+|.
T Consensus 224 --a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~----------ekR~P~ 264 (277)
T 4di1_A 224 --ALAAAKAVINDVFELEATERAAAERRRYVELFAAG----------QRGPDG 264 (277)
T ss_dssp --HHHHHHHHHHHTTTSCHHHHHHHHHHHHHHTTSGG----------GC----
T ss_pred --HHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhcCc----------ccCCCc
Confidence 33466889999999999999999999999999999 888877
No 71
>1hzd_A AUH, AU-binding protein/enoyl-COA hydratase; RNA-binding protein,enoyl-COA hydratase, riken structural genomics/proteomics initiative, RSGI; 2.20A {Homo sapiens} SCOP: c.14.1.3 PDB: 2zqq_A 2zqr_A
Probab=100.00 E-value=1.4e-46 Score=389.88 Aligned_cols=250 Identities=25% Similarity=0.409 Sum_probs=215.4
Q ss_pred CcEEEEE---ecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCC-CCCcCCCCchhhhhccCCCc
Q 004972 4 PRVTMEV---GNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNG-GRFSGGFDINVFQKVHGAGD 78 (721)
Q Consensus 4 ~~v~~~~---~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g-~~F~aG~Dl~~~~~~~~~~~ 78 (721)
..+.++. .+++|++||||||+ .|++|.+|+++|.++++.+++|+++++|||||.| ++||+|+|++++..... ..
T Consensus 8 ~~~~~~~~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~~-~~ 86 (272)
T 1hzd_A 8 DELRVRHLEEENRGIVVLGINRAYGKNSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERAKMSS-SE 86 (272)
T ss_dssp CSEEEEECCGGGTTEEEEEECCGGGTTCBCTTHHHHHHHHHHHHHHCSSCSEEEEEESBTEEEECCBCHHHHTTSCH-HH
T ss_pred CcEEEEecccccCCEEEEEEcCCCcCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEecCCCCCCcCCCChhhhhccCh-HH
Confidence 3455553 25789999999995 7999999999999999999999999999999998 69999999998754211 11
Q ss_pred ccccchHHHHHHHHHHhhCCCcEEEEECCcccccchHhhhhcCEEEeeCCceEeCcccccCcccc---ccccccccCHHH
Q 004972 79 VSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSK 155 (721)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~a~~~~pe~~~Gl~P~---~~~l~r~~G~~~ 155 (721)
...+....++++ ..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|+ +++|+|++|..+
T Consensus 87 ~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~ 165 (272)
T 1hzd_A 87 VGPFVSKIRAVI-NDIANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAIGMSL 165 (272)
T ss_dssp HHHHHHHHHHHH-HHHHTCSSCEEEEESEEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCSSHHHHHHHHHCHHH
T ss_pred HHHHHHHHHHHH-HHHHhCCCCEEEEeCceEEecHHHHHHhCCEEEEcCCCEEeCchhccCCCCCchHHHHHHHHhCHHH
Confidence 111222344555 6689999999999999999999999999999999999999999999999997 899999999999
Q ss_pred HHHHHHcCCCcCHHHHHHcCCccEEcCCchH----HHHHHHHHHHHHhcCchhhhhhhccCCCCCcHHHHHHHHHHHHHH
Q 004972 156 AIEMMLLSKSITSEEGWKLGLIDAVVTSEEL----LKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQA 231 (721)
Q Consensus 156 a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l----~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (721)
|++|++||++++|+||+++||||+|+|++++ .+++.+++++++..+|.
T Consensus 166 A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~~~~~a~~~a~~la~~~p~---------------------------- 217 (272)
T 1hzd_A 166 AKELIFSARVLDGKEAKAVGLISHVLEQNQEGDAAYRKALDLAREFLPQGPV---------------------------- 217 (272)
T ss_dssp HHHHHHHTCEEEHHHHHHHTSCSEEECCCTTSCHHHHHHHHHHHTTTTSCHH----------------------------
T ss_pred HHHHHHcCCcCCHHHHHHCCCcceecChhhhhHHHHHHHHHHHHHHHhCCHH----------------------------
Confidence 9999999999999999999999999998875 45677777777776653
Q ss_pred HHhCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcC
Q 004972 232 KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 291 (721)
Q Consensus 232 ~~~~~~~~A~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~ 291 (721)
+...+|++++.+...+++++++.|.+.+..++.|+|++|++++|++||+|.+
T Consensus 218 --------a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~egi~af~ekr~p~~ 269 (272)
T 1hzd_A 218 --------AMRVAKLAINQGMEVDLVTGLAIEEACYAQTIPTKDRLEGLLAFKEKRPPRY 269 (272)
T ss_dssp --------HHHHHHHHHHHHHTSCHHHHHHHHHHHHHTTTTCHHHHHHHHHHTTTSCCCC
T ss_pred --------HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHhcCCCCCC
Confidence 2335678888888889999999999999999999999999999999998875
No 72
>3bpt_A 3-hydroxyisobutyryl-COA hydrolase; coenzyme A, beta-hydroxyisobutyryl acid, querceti structural genomics consortium, SGC; HET: QUE; 1.50A {Homo sapiens}
Probab=100.00 E-value=1.5e-45 Score=396.56 Aligned_cols=287 Identities=22% Similarity=0.300 Sum_probs=220.5
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCC-CCCcCCCCchhhhhccCCCc--
Q 004972 3 APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNG-GRFSGGFDINVFQKVHGAGD-- 78 (721)
Q Consensus 3 ~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g-~~F~aG~Dl~~~~~~~~~~~-- 78 (721)
.+.|.++. +++|++||||||+ .|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++........
T Consensus 5 ~~~v~~~~-~~~v~~itLnrP~~~Nal~~~m~~~L~~al~~~~~d~~vr~vVltG~g~~~FcaG~Dl~~~~~~~~~~~~~ 83 (363)
T 3bpt_A 5 AEEVLLGK-KGCTGVITLNRPKFLNALTLNMIRQIYPQLKKWEQDPETFLIIIKGAGGKAFCAGGDIRVISEAEKAKQKI 83 (363)
T ss_dssp CCSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEETTSSEEECCBCHHHHHHHHTSSCCC
T ss_pred CcceEEEE-ECCEEEEEEcCCCcCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCcccCCcCHHHHHhhcccccHH
Confidence 45788998 7899999999995 7999999999999999999999999999999998 89999999999864321111
Q ss_pred ccccchHHHHHHHHHHhhCCCcEEEEECCcccccchHhhhhcCEEEeeCCceEeCcccccCcccc---ccccccccCHHH
Q 004972 79 VSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSK 155 (721)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~a~~~~pe~~~Gl~P~---~~~l~r~~G~~~ 155 (721)
...+......++ ..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|+ +++|+|++|. +
T Consensus 84 ~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~~g~-~ 161 (363)
T 3bpt_A 84 APVFFREEYMLN-NAVGSCQKPYVALIHGITMGGGVGLSVHGQFRVATEKCLFAMPETAIGLFPDVGGGYFLPRLQGK-L 161 (363)
T ss_dssp HHHHHHHHHHHH-HHHHTCSSCEEEEECSEEETHHHHTTTTSSEEEECTTCEEECCGGGTTSCCCTTHHHHHHHSSTT-H
T ss_pred HHHHHHHHHHHH-HHHHhCCCCEEEEECCEEehHHHHHHHhCCEEEEcCCeEEeCCccccCCCCCchHHHHHHHhhHH-H
Confidence 111112223445 6689999999999999999999999999999999999999999999999997 8999999997 9
Q ss_pred HHHHHHcCCCcCHHHHHHcCCccEEcCCchHHHHHHHHHHHHHhcCchhhhhhhcc------------CC----------
Q 004972 156 AIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRT------------DK---------- 213 (721)
Q Consensus 156 a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~------------~~---------- 213 (721)
|++|++||++++|+||+++||||+|||++++.+.+..+++ +...++..+....+. ..
T Consensus 162 a~~l~ltg~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~-l~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~ 240 (363)
T 3bpt_A 162 GYFLALTGFRLKGRDVYRAGIATHFVDSEKLAMLEEDLLA-LKSPSKENIASVLENYHTESKIDRDKSFILEEHMDKINS 240 (363)
T ss_dssp HHHHHHHCCCEETHHHHHTTSCSEECCGGGHHHHHHHHHH-CSSCCHHHHHHHHHHHHHHCCTTTTCCCTTGGGHHHHHH
T ss_pred HHHHHHcCCCCCHHHHHHCCCcceecCHHHHHHHHHHHHh-cccCCHHHHHHHHHHHHhhhcccCCCchhhHHHHHHHHH
Confidence 9999999999999999999999999999998776544432 111111111000000 00
Q ss_pred ---CCCcHHHHHHH-----HHHHHHHHHhCCCCh-hHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 004972 214 ---LGSLSEAREVL-----KLARLQAKKTAPNMP-QHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFF 284 (721)
Q Consensus 214 ---~~~~~~~~~~~-----~~~~~~~~~~~~~~~-A~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~ 284 (721)
.++..+....+ ..+.+..++...+-| |+..+|++++.+...+++++++.|.+.+..++.|+|++|++++|+
T Consensus 241 ~f~~~~~~ei~~al~~~~~~~a~~~a~~la~~sP~al~~~k~~l~~~~~~~l~~~l~~E~~~~~~~~~s~D~~EGv~Afl 320 (363)
T 3bpt_A 241 CFSANTVEEIIENLQQDGSSFALEQLKVINKMSPTSLKITLRQLMEGSSKTLQEVLTMEYRLSQACMRGHDFHEGVRAVL 320 (363)
T ss_dssp HTTSSSHHHHHHHHHHHCCHHHHHHHHHHTTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTSSHHHHHHHHHT
T ss_pred HhCCCCHHHHHHHHhccChHHHHHHHHHHHhCCchHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCccHHhhhhhee
Confidence 00000000001 011122333333444 778899999999999999999999999999999999999999999
Q ss_pred -Hh-hhhcCCC
Q 004972 285 -AQ-RATSKVP 293 (721)
Q Consensus 285 -~~-r~~~~~~ 293 (721)
+| |+|++.+
T Consensus 321 ~eK~r~P~~~~ 331 (363)
T 3bpt_A 321 IDKDQSPKWKP 331 (363)
T ss_dssp TSCCCCCCCSS
T ss_pred eCCCCCCCCCC
Confidence 77 7766543
No 73
>2q35_A CURF; crotonase, lyase; 1.65A {Lyngbya majuscula} PDB: 2q34_A 2q2x_A
Probab=100.00 E-value=6e-46 Score=378.64 Aligned_cols=235 Identities=23% Similarity=0.303 Sum_probs=209.3
Q ss_pred EEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccCCCcccccch
Q 004972 6 VTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPD 84 (721)
Q Consensus 6 v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~ 84 (721)
..++. +++|++||||||+ .|++|.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++....... . ..
T Consensus 5 ~~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~-~-~~-- 79 (243)
T 2q35_A 5 QLTEL-GNGVVQITMKDESSRNGFSPSIVEGLRHCFSVVAQNQQYKVVILTGYGNYFSSGASKEFLIRKTRGE-V-EV-- 79 (243)
T ss_dssp EEEEE-ETTEEEEEECCGGGTSBSCHHHHHHHHHHHHHHHHCTTCCEEEEECBTTEEECBSCHHHHHHHHTTC-C-CC--
T ss_pred EEEEe-eCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCeeCCCChHHHhhccchh-h-HH--
Confidence 44566 7899999999994 79999999999999999999999999999999999999999999886432111 1 11
Q ss_pred HHHHHHHHHHhhCCCcEEEEECCcccccchHhhhhcCEEEeeCCceEeCcccccCcccc---ccccccccCHHHHHHHHH
Q 004972 85 VSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMML 161 (721)
Q Consensus 85 ~~~~~~~~~l~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~a~~~~pe~~~Gl~P~---~~~l~r~~G~~~a~~l~l 161 (721)
++++ ..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|+ +++|+|++|..+|++|++
T Consensus 80 --~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~l 156 (243)
T 2q35_A 80 --LDLS-GLILDCEIPIIAAMQGHSFGGGLLLGLYADFVVFSQESVYATNFMKYGFTPVGATSLILREKLGSELAQEMIY 156 (243)
T ss_dssp --CCCH-HHHHTCCSCEEEEECSEEETHHHHHHHTSSEEEEESSSEEECCHHHHTSCCCSSHHHHHHHHHCHHHHHHHHH
T ss_pred --HHHH-HHHHhCCCCEEEEEcCccccchHHHHHhCCEEEEeCCCEEECCccccCCCCcchHHHHHHHHhCHHHHHHHHH
Confidence 2344 5688999999999999999999999999999999999999999999999997 789999999999999999
Q ss_pred cCCCcCHHHHHHcCCccEEcCCchHHHHHHHHHHHHHhcCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCCChhH
Q 004972 162 LSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 241 (721)
Q Consensus 162 tg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~ 241 (721)
||++++|+||+++||||+|+|++++.+++.++++++++.+|.+ .
T Consensus 157 tg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a------------------------------------~ 200 (243)
T 2q35_A 157 TGENYRGKELAERGIPFPVVSRQDVLNYAQQLGQKIAKSPRLS------------------------------------L 200 (243)
T ss_dssp HCCCEEHHHHHHTTCSSCEECHHHHHHHHHHHHHHHTTSCHHH------------------------------------H
T ss_pred cCCCCCHHHHHHcCCCCEecChhHHHHHHHHHHHHHHhCCHHH------------------------------------H
Confidence 9999999999999999999999999999999999999987643 2
Q ss_pred HHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 004972 242 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFF 284 (721)
Q Consensus 242 ~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~ 284 (721)
..+|++++.....+++++++.|.+.+..++.|+|++|++++|+
T Consensus 201 ~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~s~d~~eg~~a~~ 243 (243)
T 2q35_A 201 VALKQHLSADIKAKFPEAIKKELEIHQVTFNQPEIASRIQQEF 243 (243)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSTTHHHHHHTTC
T ss_pred HHHHHHHHHhhhcCHHHHHHHHHHHHHHHhCCHHHHHHHhhcC
Confidence 3456777777777788999999999999999999999999874
No 74
>3ju1_A Enoyl-COA hydratase/isomerase family protein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 2.30A {Shewanella oneidensis}
Probab=100.00 E-value=1e-45 Score=401.61 Aligned_cols=283 Identities=17% Similarity=0.219 Sum_probs=219.7
Q ss_pred CcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCC-CCCcCCCCchhhhhccCC-----
Q 004972 4 PRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNG-GRFSGGFDINVFQKVHGA----- 76 (721)
Q Consensus 4 ~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g-~~F~aG~Dl~~~~~~~~~----- 76 (721)
+.|.++. +++|++||||||+ .|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++......
T Consensus 42 ~~v~~~~-~~~V~~ItLnrP~~~NAl~~~m~~~L~~al~~~~~d~~vr~vVltG~G~~~FcaG~Dl~~~~~~~~~~~~~~ 120 (407)
T 3ju1_A 42 QTLATAS-GKLVGVVTLNVEKALNALDLDMVRAMTVQLNLWKKDPLIACVVLDGSGEKAFCAGGDVRALYHASVAAKGQV 120 (407)
T ss_dssp EEEECTT-SCEEEEEEECCGGGTSCBCHHHHHHHHHHHHHHHHCTTEEEEEEEESSSSEEECCBCCHHHHHHHHHHTSSC
T ss_pred ceEEEEE-ECCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEecCCCCcccCCCChhhhhhccccccccc
Confidence 4566666 7899999999996 7999999999999999999999999999999999 799999999998653210
Q ss_pred -CcccccchHHHHHHHHHHhhCCCcEEEEECCcccccchHhhhhcCEEEeeCCceEeCcccccCcccc---ccccccccC
Q 004972 77 -GDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVG 152 (721)
Q Consensus 77 -~~~~~~~~~~~~~~~~~l~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~a~~~~pe~~~Gl~P~---~~~l~r~~G 152 (721)
.....+......++ ..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|+ +++|+|++|
T Consensus 121 ~~~~~~~~~~~~~l~-~~i~~~~kPvIAaVnG~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~P~~G~t~~L~rl~g 199 (407)
T 3ju1_A 121 TEVAKVFFEEEYRLD-YLLHTYGKPVLVWGDGIVMGGGLGLMAGASHKVVTETSRIAMPEVTIGLYPDVGGSYFLNRMPG 199 (407)
T ss_dssp CHHHHHHHHHHHHHH-HHHHTCSSCEEEECCSEEETHHHHHHHHCSEEEECTTCEEECGGGGGTCCSCTTHHHHTTTSST
T ss_pred HHHHHHHHHHHHHHH-HHHHHCCCCEEEEECCccccCcchHHhcCCEEEEcCCCEEeChHhhcCCCCCchHHHHHhhhhH
Confidence 10112222233445 6699999999999999999999999999999999999999999999999997 899999999
Q ss_pred HHHHHHHHHcCCCcCHHHHHHcCCccEEcCCchHHH---H----------------HHHHHHHHHhcCc-----------
Q 004972 153 LSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK---V----------------SRLWALDIAARRK----------- 202 (721)
Q Consensus 153 ~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~---~----------------a~~~a~~~a~~~~----------- 202 (721)
.+|++|++||++++|+||+++||||+|||++++.+ + +.++++++.....
T Consensus 200 -~~A~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~L~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~l~~~ 278 (407)
T 3ju1_A 200 -KMGLFLGLTAYHMNAADACYVGLADHYLNRDDKELMFDAMATLDWSDSPALNHQRLDTMINELSNQVDIPKGDSVLAES 278 (407)
T ss_dssp -THHHHHHHHCCCBCHHHHHHHTSCSEECCGGGHHHHHHHHHSSCCCSCHHHHHHHHHHHHHHHHTTCSSCCCCCHHHHT
T ss_pred -HHHHHHHHcCCcCcHHHHHHCCCccEEcCHHHHHHHHHHHhcccccccccchhHHHHHHHHHhhhhccccCCchhHHHH
Confidence 99999999999999999999999999999999887 3 3334433322110
Q ss_pred -hhhhhhhccCCCCCcHHHHHHHH-------HHHHHHHH-hCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCC
Q 004972 203 -PWIRSLHRTDKLGSLSEAREVLK-------LARLQAKK-TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVML 273 (721)
Q Consensus 203 -~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~-~~~~~~A~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s 273 (721)
.++...+. .++.+....+. .+....++ ....-.|...+|++++.+...+++++++.|.+.+..++.+
T Consensus 279 ~~~I~~~f~----~sv~~i~~~L~~~~~~~~~a~~~a~~la~~sP~sl~~tk~~l~~~~~~~l~~~l~~E~~~~~~~~~s 354 (407)
T 3ju1_A 279 QEMIDRLMA----GSLTDIVTRMSTLSTDEAWLSKACATMLAGSPISWHLAYIQTQLGTKLSLAQCFKWELTVSVNVCAK 354 (407)
T ss_dssp HHHHHHHTC----SCHHHHHHHHHHCCCSCHHHHHHHHHHHHSCHHHHHHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhc----CCHHHHHHHHHhcccccHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhCC
Confidence 01111111 11111100000 01111111 1123348889999999999999999999999999999999
Q ss_pred HHHHHHHHHHH-Hh-hhhcCCC
Q 004972 274 DTSRGLVHVFF-AQ-RATSKVP 293 (721)
Q Consensus 274 ~~~~~~i~aF~-~~-r~~~~~~ 293 (721)
+|++||+++|+ +| |+|++.+
T Consensus 355 ~D~~EGvrAflidKdr~P~w~~ 376 (407)
T 3ju1_A 355 GDFCEGVRALLIDKDKQPKWQF 376 (407)
T ss_dssp SSHHHHHHHHTTSCCCCCCCSS
T ss_pred HHHHHHHHHHHhcCCcCCCCCC
Confidence 99999999999 87 7777655
No 75
>1pjh_A Enoyl-COA isomerase; ECI1P; beta-BETA-alpha spiral fold, inter-trimer contacts; 2.10A {Saccharomyces cerevisiae} SCOP: c.14.1.3 PDB: 1hno_A 1k39_A* 1hnu_A
Probab=100.00 E-value=3.2e-45 Score=381.47 Aligned_cols=242 Identities=18% Similarity=0.186 Sum_probs=201.0
Q ss_pred CCCCcEEEEEecCcEEEEEeCCC-CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccCCC--
Q 004972 1 MAAPRVTMEVGNDGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAG-- 77 (721)
Q Consensus 1 m~~~~v~~~~~~~~v~~i~l~~p-~~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~-- 77 (721)
|+++.+.++. +++|++|||||| +.|+||.+|+.+|.++++.++.|+++++|||||.|++||+|+|++++.......
T Consensus 6 m~~~~i~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~ 84 (280)
T 1pjh_A 6 RQNEKISYRI-EGPFFIIHLINPDNLNALEGEDYIYLGELLELADRNRDVYFTIIQSSGRFFSSGADFKGIAKAQGDDTN 84 (280)
T ss_dssp CCBTTEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECBTTBSBCCBCHHHHHC-------
T ss_pred ccCCceEEEE-ECCEEEEEECCCcccCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCccCCcCHHHHhhccccccc
Confidence 5667899999 789999999999 579999999999999999999999999999999999999999999885421111
Q ss_pred -ccc---ccc----hHHHHHHHHHHhhCCCcEEEEECCcccccchHhhhhcCEEEee-CCceEeCcccccCcccc---cc
Q 004972 78 -DVS---LMP----DVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA-PKTQLGLPELTLGVIPG---TQ 145 (721)
Q Consensus 78 -~~~---~~~----~~~~~~~~~~l~~~~~p~Iaav~G~a~GgG~~lalacD~ria~-~~a~~~~pe~~~Gl~P~---~~ 145 (721)
... .+. ...+.++ ..+.++||||||+|||+|+|||++|+++||+||++ ++++|++||+++|++|+ ++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~LalacD~~ia~~~~a~f~~pe~~lGl~p~~g~~~ 163 (280)
T 1pjh_A 85 KYPSETSKWVSNFVARNVYVT-DAFIKHSKVLICCLNGPAIGLSAALVALCDIVYSINDKVYLLYPFANLGLITEGGTTV 163 (280)
T ss_dssp CCSSHHHHHHHHTHHHHHHHH-HHHHHCCSEEEEEECSCEEHHHHHHHHHSSEEEESSTTCEEECCHHHHTCCCCTTHHH
T ss_pred chhhhHHHHHHHHHHHHHHHH-HHHHhCCCCEEEEECCeeeeHHHHHHHHCCEEEEeCCCCEEeCchhhcCCCCCccHHH
Confidence 000 011 1113455 66899999999999999999999999999999999 99999999999999997 89
Q ss_pred ccccccCHHHHHHHHHcCCCcCHHHHHHcCCccEEcCCc-----hHHHHHH-HHHHHHHhcCchhhhhhhccCCCCCcHH
Q 004972 146 RLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE-----ELLKVSR-LWALDIAARRKPWIRSLHRTDKLGSLSE 219 (721)
Q Consensus 146 ~l~r~~G~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~-----~l~~~a~-~~a~~~a~~~~~~~~~~~~~~~~~~~~~ 219 (721)
+|+|++|..+|++|++||++++|+||+++||||+|||++ ++++++. ++++++++.+|.++
T Consensus 164 ~l~r~vG~~~A~~llltg~~~~a~eA~~~GLv~~vv~~~~~~~~~l~~~a~~~~a~~la~~~~~a~-------------- 229 (280)
T 1pjh_A 164 SLPLKFGTNTTYECLMFNKPFKYDIMCENGFISKNFNMPSSNAEAFNAKVLEELREKVKGLYLPSC-------------- 229 (280)
T ss_dssp HHHHHHCHHHHHHHHHTTCCEEHHHHHHTTCCSEECCCCTTCHHHHHHHHHHHHHHHHTTCCHHHH--------------
T ss_pred HHHHHhCHHHHHHHHHhCCCCCHHHHHHCCCcceeeCCccccHHHHHHHHHHHHHHHHHcCCHHHH--------------
Confidence 999999999999999999999999999999999999885 7888885 99999999886432
Q ss_pred HHHHHHHHHHHHHHhCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcCC
Q 004972 220 AREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 292 (721)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~~ 292 (721)
..+|++++.... ..++ ...++|+++++.+|++||++..+
T Consensus 230 ----------------------~~~K~~l~~~~~----~~l~--------~~~~~d~~e~~~af~~kr~~e~~ 268 (280)
T 1pjh_A 230 ----------------------LGMKKLLKSNHI----DAFN--------KANSVEVNESLKYWVDGEPLKRF 268 (280)
T ss_dssp ----------------------HHHHHHHHTTTH----HHHH--------HHHHHHHHHHHHHHHHTHHHHHH
T ss_pred ----------------------HHHHHHHHHhHH----HHHH--------HhhhHHHHHHHHHHhCCccHHHH
Confidence 244566655332 2222 13578999999999999988433
No 76
>3r6h_A Enoyl-COA hydratase, ECHA3; ssgcid, mycobacerium marinum, structura genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium marinum M} PDB: 4hc8_A*
Probab=100.00 E-value=1e-44 Score=367.17 Aligned_cols=227 Identities=24% Similarity=0.263 Sum_probs=197.2
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccCCCccc
Q 004972 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVS 80 (721)
Q Consensus 1 m~~~~v~~~~~~~~v~~i~l~~p~~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~ 80 (721)
|+ +.|.++. +++|++||||||+.|++|.+|+++|.++++++++| ++|+|||||.|++||+|+|++++.... .....
T Consensus 3 M~-~~v~~~~-~~~v~~itlnrp~~Nal~~~~~~~L~~al~~~~~d-~vr~vvltg~g~~F~aG~Dl~~~~~~~-~~~~~ 78 (233)
T 3r6h_A 3 MS-GPVTYTH-DDAIGVIRMDDGKVNVLGPTMQQALNEAIDAADRD-NVGALVIAGNHRVFSGGFDLKVLTSGE-AKPAI 78 (233)
T ss_dssp ---CCEEEEE-ETTEEEEEECCSSSCCCSHHHHHHHHHHHHHHHHH-TCSEEEEECCSSEEECCSCHHHHC----CHHHH
T ss_pred CC-CceEEEE-ECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEECCCCCccCCcChHHHhccC-hHHHH
Confidence 55 5689999 79999999999989999999999999999999977 699999999999999999999986532 11122
Q ss_pred ccchHHHHHHHHHHhhCCCcEEEEECCcccccchHhhhhcCEEEeeCCceEeCcccccCcccc---ccccccccCHHHHH
Q 004972 81 LMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAI 157 (721)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~a~~~~pe~~~Gl~P~---~~~l~r~~G~~~a~ 157 (721)
.+....++++ ..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|+ ++++++++|..+|+
T Consensus 79 ~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~~~~~g~~~l~~~~g~~~a~ 157 (233)
T 3r6h_A 79 DMLRGGFELS-YRLLSYPKPVVIACTGHAIAMGAFLLCSGDHRVAAHAYNVQANEVAIGMTIPYAAMEVLKLRLTPSAYQ 157 (233)
T ss_dssp HHHHHHHHHH-HHHHTCSSCEEEEECSEEETHHHHHHTTSSEEEECTTCCEECCGGGGTCCCCHHHHHHHHHHSCHHHHH
T ss_pred HHHHHHHHHH-HHHHhCCCCEEEEECCcchHHHHHHHHhCCEEEEeCCcEEECchhhhCCCCCccHHHHHHHHhCHHHHH
Confidence 2333344556 6799999999999999999999999999999999999999999999999765 88999999999999
Q ss_pred HHHHcCCCcCHHHHHHcCCccEEcCCchHHHHHHHHHHHHHhcCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCC
Q 004972 158 EMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 237 (721)
Q Consensus 158 ~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (721)
++++||++++|+||+++||||+|||++++.+++.++|+++++.+|.+
T Consensus 158 ~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a--------------------------------- 204 (233)
T 3r6h_A 158 QAAGLAKTFFGETALAAGFIDEISLPEVVLSRAEEAAREFAGLNQQA--------------------------------- 204 (233)
T ss_dssp HHHHSCCEECHHHHHHHTSCSEECCGGGHHHHHHHHHHHHHTSCHHH---------------------------------
T ss_pred HHHHcCCcCCHHHHHHcCCCcEeeCHHHHHHHHHHHHHHHHcCCHHH---------------------------------
Confidence 99999999999999999999999999999999999999999988643
Q ss_pred ChhHHHHHHHHHHhhcCCHHHHHHHHHHHHH
Q 004972 238 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFK 268 (721)
Q Consensus 238 ~~A~~~~~~~i~~~~~~~~~~~l~~E~~~~~ 268 (721)
...+|++++.....+++++++.|.+.|.
T Consensus 205 ---~~~~K~~l~~~~~~~l~~~l~~e~~~f~ 232 (233)
T 3r6h_A 205 ---HNATKLRARAEALKAIRAGIDGIEAEFG 232 (233)
T ss_dssp ---HHHHHHHTTHHHHHHHHHHHHTSHHHHC
T ss_pred ---HHHHHHHHHHHHHhHHHHHHHHHHHHhC
Confidence 3355677777777788999999988763
No 77
>2j5g_A ALR4455 protein; enzyme evolution, C-C bond hydrolase, hydrolase, lyase, crotonase, biocatalysis, beta-diketone; 1.46A {Anabaena SP} PDB: 2j5s_A* 2j5g_D
Probab=100.00 E-value=1.9e-44 Score=370.73 Aligned_cols=236 Identities=15% Similarity=0.214 Sum_probs=200.6
Q ss_pred CCcEEEEEecC-cEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccCCCccc
Q 004972 3 APRVTMEVGND-GVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVS 80 (721)
Q Consensus 3 ~~~v~~~~~~~-~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~ 80 (721)
++.+.+++ ++ +|++||||||+ .|++|.+|+++|.+++++++.|+++|+|||||.|+.||+|+|++++..........
T Consensus 22 ~~~i~~~~-~~~~Va~ItLnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~ 100 (263)
T 2j5g_A 22 YENLHFHR-DENGILEVRMHTNGSSLVFTGKTHREFPDAFYDISRDRDNRVVILTGSGDAWMAEIDFPSLGDVTNPREWD 100 (263)
T ss_dssp CTTEEEEE-CTTCEEEEEECBTTBSCEECHHHHHHHHHHHHHHHHCTTCCEEEEECBTTEEECEECSGGGCCTTSHHHHH
T ss_pred CCeEEEEE-cCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCcccCcCHHHHhccCCHHHHH
Confidence 45688999 67 99999999995 79999999999999999999999999999999999999999999875421111111
Q ss_pred ccchHHHHHHHHHHhhCCCcEEEEECCcccccchHhhhhcCEEEeeCCceEeC-cccccCcccc---ccccccccCHHHH
Q 004972 81 LMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGL-PELTLGVIPG---TQRLPRLVGLSKA 156 (721)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~a~~~~-pe~~~Gl~P~---~~~l~r~~G~~~a 156 (721)
.+......++ ..+.++||||||+|||+|+ ||++|+++||+||++++++|++ ||+++|++|+ +++|+|++|..+|
T Consensus 101 ~~~~~~~~~~-~~l~~~~kPvIAav~G~a~-GG~~LalacD~ria~~~a~f~~~pe~~lGl~p~~g~~~~L~r~vG~~~A 178 (263)
T 2j5g_A 101 KTYWEGKKVL-QNLLDIEVPVISAVNGAAL-LHSEYILTTDIILASENTVFQDMPHLNAGIVPGDGVHILWPLALGLYRG 178 (263)
T ss_dssp HHHHHHHHHH-HHHHTCCSCEEEEECSEEC-SCGGGGGGCSEEEEETTCEECCCHHHHHTCCCCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-HHHHhCCCCEEEEECCcch-HHHHHHHhCCEEEEcCCCEEecCcccccccCCCccHHHHHHHHcCHHHH
Confidence 1222234555 6689999999999999999 6999999999999999999999 9999999997 7899999999999
Q ss_pred HHHHHcCCCcCHHHHHHcCCccEEcCCchHHHHHHHHHHHHHhcCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCC
Q 004972 157 IEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAP 236 (721)
Q Consensus 157 ~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (721)
++|++||++++|+||+++||||+|||++++++++.++++++++.+|.++
T Consensus 179 ~~llltG~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~------------------------------- 227 (263)
T 2j5g_A 179 RYFLFTQEKLTAQQAYELNVVHEVLPQSKLMERAWEIARTLAKQPTLNL------------------------------- 227 (263)
T ss_dssp HHHHHTTCCEEHHHHHHTTSCSEEECGGGHHHHHHHHHHHHHTSCHHHH-------------------------------
T ss_pred HHHHHcCCCCCHHHHHHCCCccEecChHHHHHHHHHHHHHHHhCCHHHH-------------------------------
Confidence 9999999999999999999999999999999999999999999886432
Q ss_pred CChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhh
Q 004972 237 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRA 288 (721)
Q Consensus 237 ~~~A~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~ 288 (721)
..+|++++.....++++++..| ...|++++|++||.
T Consensus 228 -----~~~K~~l~~~~~~~l~~~l~~e-----------~~~eg~~af~~~~~ 263 (263)
T 2j5g_A 228 -----RYTRVALTQRLKRLVNEGIGYG-----------LALEGITATDLRNT 263 (263)
T ss_dssp -----HHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHTTC-
T ss_pred -----HHHHHHHHhhhhccHHHHHHHH-----------HHHhhHHHHHhccC
Confidence 3456677766555566665554 45699999999873
No 78
>3njd_A Enoyl-COA hydratase; ssgcid, mycobacerium smegmatis, structu genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium smegmatis} PDB: 3njb_A
Probab=100.00 E-value=3.4e-43 Score=374.17 Aligned_cols=203 Identities=24% Similarity=0.335 Sum_probs=173.0
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccCCCcc
Q 004972 1 MAAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDV 79 (721)
Q Consensus 1 m~~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~~~ 79 (721)
|.+++|.++. +++|++||||||+ .|+||.+|+.+|.+++++++.|+++|+|||||.|++||+|+|++++.........
T Consensus 32 ~~~~~i~~e~-~~~Va~ItLnrP~~~NAl~~~m~~eL~~al~~~~~d~~vrvvVltG~G~~FcaG~Dl~~~~~~~~~~~~ 110 (333)
T 3njd_A 32 DNLKTMTYEV-TDRVARITFNRPEKGNAIVADTPLELSALVERADLDPDVHVILVSGRGEGFCAGFDLSAYAEGSSSAGG 110 (333)
T ss_dssp TSCSSEEEEE-ETTEEEEEECCGGGTTCBCTHHHHHHHHHHHHHHHCTTCCEEEEEESTTSSBCCBC-------------
T ss_pred CCCCeEEEEE-ECCEEEEEeCCCCccCCCCHHHHHHHHHHHHHHhhCCCcEEEEEECCCCceecCcCHHHHhhccccccc
Confidence 3467899999 7999999999995 7999999999999999999999999999999999999999999998653211100
Q ss_pred ---------------------c--------ccchHHHHHHHHHHhhCCCcEEEEECCcccccchHhhhhcCEEEeeCCce
Q 004972 80 ---------------------S--------LMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQ 130 (721)
Q Consensus 80 ---------------------~--------~~~~~~~~~~~~~l~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~a~ 130 (721)
. .+...+..++ ..|.++||||||+|||+|+|||++|+++||+|||+++++
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~kPvIAaV~G~a~GgG~~LalacD~rias~~a~ 189 (333)
T 3njd_A 111 GSPYEGTVLSGKTQALNHLPDEPWDPMVDYQMMSRFVRGF-ASLMHCDKPTVVKIHGYCVAGGTDIALHADQVIAAADAK 189 (333)
T ss_dssp --CCTTSTTCHHHHHHTTCSSSCCCHHHHHHHHHHHHHHH-THHHHSSSCEEEEECSEEETHHHHHHTTSSEEEECTTCE
T ss_pred ccccccccccccccccccccccccchhhHHHHHHHHHHHH-HHHHhCCCCEEEEECCEEeHHHHHHHHhCCEEEECCCCe
Confidence 0 0111223344 568899999999999999999999999999999999999
Q ss_pred EeCcccccCccccccccccccCHHHHHHHHHcCCCcCHHHHHHcCCccEEcCCchHHHHHHHHHHHHHhcCchhh
Q 004972 131 LGLPELTLGVIPGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWI 205 (721)
Q Consensus 131 ~~~pe~~~Gl~P~~~~l~r~~G~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~ 205 (721)
|++||+++|++|+..+|++++|..+|++|++||++++|+||+++||||+|||++++++++.++|++|++.++.++
T Consensus 190 f~~pe~~lG~~P~~g~l~~~vG~~~A~ellltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~lA~~ia~~~~~al 264 (333)
T 3njd_A 190 IGYPPMRVWGVPAAGLWAHRLGDQRAKRLLFTGDCITGAQAAEWGLAVEAPDPADLDARTERLVERIAAMPVNQL 264 (333)
T ss_dssp EECGGGGTTCCCTTCCHHHHHCHHHHHHHHTTCCEEEHHHHHHTTSSSBCCCGGGHHHHHHHHHHHHHTSCHHHH
T ss_pred eechhhceeccCHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHCCCccEecChHHHHHHHHHHHHHHHcCCHHHH
Confidence 999999999999955899999999999999999999999999999999999999999999999999999887543
No 79
>3ot6_A Enoyl-COA hydratase/isomerase family protein; structural genomics, PSI-2, protein structure initiative; 2.50A {Pseudomonas syringae PV}
Probab=100.00 E-value=2.3e-44 Score=364.34 Aligned_cols=222 Identities=21% Similarity=0.287 Sum_probs=195.8
Q ss_pred CcEEEEEecCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccCCCcccccc
Q 004972 4 PRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMP 83 (721)
Q Consensus 4 ~~v~~~~~~~~v~~i~l~~p~~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 83 (721)
+.|.++. +++|++||||||+.|++|.+|+++|.+++++++.| +++|||||.|++||+|+|++++.... .....+.
T Consensus 6 ~~v~~~~-~~~v~~itlnrp~~Nal~~~~~~~L~~al~~~~~d--~~~vvltg~g~~F~aG~Dl~~~~~~~--~~~~~~~ 80 (232)
T 3ot6_A 6 DLVSYHL-DDGVATLTLNNGKVNAISPDVIIAFNAALDQAEKD--RAIVIVTGQPGILSGGYDLKVMTSSA--EAAINLV 80 (232)
T ss_dssp HHEEEEE-ETTEEEEEECCTTTTCBCHHHHHHHHHHHHHHHHT--TCEEEEECBTEEEECCBCHHHHHHCH--HHHHHHH
T ss_pred cceEEEE-ECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHhcC--CCEEEEECCCCCccCCcCHHHHhhCh--HHHHHHH
Confidence 4688998 79999999999989999999999999999999976 48999999999999999999986521 1122233
Q ss_pred hHHHHHHHHHHhhCCCcEEEEECCcccccchHhhhhcCEEEeeCC-ceEeCcccccCcccc---ccccccccCHHHHHHH
Q 004972 84 DVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPK-TQLGLPELTLGVIPG---TQRLPRLVGLSKAIEM 159 (721)
Q Consensus 84 ~~~~~~~~~~l~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~-a~~~~pe~~~Gl~P~---~~~l~r~~G~~~a~~l 159 (721)
...+.++ +.+.++||||||+|||+|+|||++|+++||+||++++ ++|++||+++|++|+ ++++++++|..+|++|
T Consensus 81 ~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~~a~f~~pe~~~Gl~p~~~g~~~l~~~ig~~~a~~l 159 (232)
T 3ot6_A 81 AQGSTLA-RRMLSHPFPIIVACPGHAVAKGAFLLLSADYRIGVAGPFSIGLNEVQIGMTMHHAGIELARDRLRKSAFNRS 159 (232)
T ss_dssp HHHHHHH-HHHHTCSSCEEEECCEEEETHHHHHHTTSSEEEEECSSCCEECCTTTTTCCCCHHHHHHHHHHSCHHHHHHH
T ss_pred HHHHHHH-HHHHcCCCCEEEEECCEeehHHHHHHHHCCEEEEeCCCcEEECcccccCCCCchhHHHHHHHHhCHHHHHHH
Confidence 3445566 6799999999999999999999999999999999998 899999999999864 7889999999999999
Q ss_pred HHcCCCcCHHHHHHcCCccEEcCCchHHHHHHHHHHHHHhcCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCCCh
Q 004972 160 MLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMP 239 (721)
Q Consensus 160 ~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (721)
++||++++|+||+++||||+|||++++++++.++|+++++.+|.+
T Consensus 160 ~ltg~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a----------------------------------- 204 (232)
T 3ot6_A 160 VINAEMFDPEGAMAAGFLDKVVSVEELQGAALAVAAQLKKINMNA----------------------------------- 204 (232)
T ss_dssp HTSCCEECHHHHHHHTSCSEEECTTTHHHHHHHHHHHHTTSCHHH-----------------------------------
T ss_pred HHcCCccCHHHHHHCCCCCEecCHHHHHHHHHHHHHHHHcCCHHH-----------------------------------
Confidence 999999999999999999999999999999999999999988643
Q ss_pred hHHHHHHHHHHhhcCCHHHHHHHHHHHH
Q 004972 240 QHQACLDVIEEGIVHGGYSGVLKEAKVF 267 (721)
Q Consensus 240 A~~~~~~~i~~~~~~~~~~~l~~E~~~~ 267 (721)
...+|++++.....+++++++.|.+.|
T Consensus 205 -~~~~K~~l~~~~~~~l~~~l~~E~~~~ 231 (232)
T 3ot6_A 205 -HKKTKLKVRKGLLDTLDAAIEQDRQHM 231 (232)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred -HHHHHHHHHHHhHhHHHHHHHHHHHhc
Confidence 335677888888888999999998764
No 80
>3m6n_A RPFF protein; enoyl-COA hydratase, lyase; 1.80A {Xanthomonas campestris PV} PDB: 3m6m_A
Probab=100.00 E-value=3.6e-43 Score=369.38 Aligned_cols=253 Identities=18% Similarity=0.184 Sum_probs=211.6
Q ss_pred CCcEEEEEe-cCcEEEEEeCCCC-----CCCCCHHHHHHHHHHHHHHhc-----CCCceEEEEEeCCCCCcCCCCchhhh
Q 004972 3 APRVTMEVG-NDGVAIITLINPP-----VNALAIPIVAGLKDKFEEATS-----RDDVKAIVLTGNGGRFSGGFDINVFQ 71 (721)
Q Consensus 3 ~~~v~~~~~-~~~v~~i~l~~p~-----~Nal~~~~~~~l~~~l~~~~~-----~~~v~~vVltg~g~~F~aG~Dl~~~~ 71 (721)
|+++.+..+ +++|++||||||+ +|+||.+|+.+|.+++++++. |+++|+|||||.|++||+|+|++++.
T Consensus 29 y~~i~v~~~~~~~V~~itLnrp~k~n~~rpal~~~m~~eL~~al~~~~~d~~~~d~~vr~vVltg~G~~FcaG~Dl~~~~ 108 (305)
T 3m6n_A 29 GSTLRIIEEPQRDVYWIHMHADLAINPGRACFSTRLVDDITGYQTNLGQRLNTAGVLAPHVVLASDSDVFNLGGDLALFC 108 (305)
T ss_dssp CTTEEEEEETTTTEEEEEECTTC-----CCSBCHHHHHHHHHHHHHHHHHHHHHTCSSCEEEEEESSSSSBCCBCHHHHH
T ss_pred CceEEEEEEEECCEEEEEECCccccCCCCCCCCHHHHHHHHHHHHHHHhcccccCCCeEEEEEECCCCCeecCcCHHHHH
Confidence 455666443 7889999999984 459999999999999999987 58999999999999999999999986
Q ss_pred hccCCCcccc---cchHHHHHHHHHH---hhCCCcEEEEECCcccccchHhhhhcCEEEeeCCceEeCcccccCcccc--
Q 004972 72 KVHGAGDVSL---MPDVSVELVVNLI---EDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG-- 143 (721)
Q Consensus 72 ~~~~~~~~~~---~~~~~~~~~~~~l---~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~a~~~~pe~~~Gl~P~-- 143 (721)
.......... +.......+ ..+ ..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|+
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g 187 (305)
T 3m6n_A 109 QLIREGDRARLLDYAQRCVRGV-HAFHVGLGARAHSIALVQGNALGGGFEAALSCHTIIAEEGVMMGLPEVLFDLFPGMG 187 (305)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHH-HHHHTGGGTTCEEEEEECSCEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCSS
T ss_pred hccccccHHHHHHHHHHHHHHH-HHHHHhcCCCCCEEEEECCEeehHHHHHHHhCCEEEEcCCCEEECchhccCcCCCcc
Confidence 5321111111 111122222 223 3589999999999999999999999999999999999999999999997
Q ss_pred -ccccccccCHHHHHHHHHcCCCcCHHHHHHcCCccEEcCCchHHHHHHHHHHHHHhcCchhhhhhhccCCCCCcHHHHH
Q 004972 144 -TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEARE 222 (721)
Q Consensus 144 -~~~l~r~~G~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 222 (721)
+++|+|++|..+|++|++||++++|+||+++||||+|||++++++++.++|++|++ +|.
T Consensus 188 ~~~~L~r~vG~~~A~~llltG~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~-~p~------------------- 247 (305)
T 3m6n_A 188 AYSFMCQRISAHLAQKIMLEGNLYSAEQLLGMGLVDRVVPRGQGVAAVEQVIRESKR-TPH------------------- 247 (305)
T ss_dssp HHHHHTTTSCHHHHHHHHHHCCEEEHHHHHHHTSCSEEECTTCHHHHHHHHHHHHTT-CHH-------------------
T ss_pred HHHHHHHHhcHHHHHHHHHcCCCCCHHHHHHCCCCCEecChhHHHHHHHHHHHHHhh-ChH-------------------
Confidence 89999999999999999999999999999999999999999999999999999986 442
Q ss_pred HHHHHHHHHHHhCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcCCC
Q 004972 223 VLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 293 (721)
Q Consensus 223 ~~~~~~~~~~~~~~~~~A~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~~~ 293 (721)
|...+|++++.....+++++++.|.+.+..++.|+|....+..++-+.+.++++
T Consensus 248 -----------------a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~~~~m~~l~~~q~~~~~ 301 (305)
T 3m6n_A 248 -----------------AWAAMQQVREMTTAVPLEEMMRITEIWVDTAMQLGEKSLRTMDRLVRAQSRRSG 301 (305)
T ss_dssp -----------------HHHHHHHHHHTTTCCCHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHC----
T ss_pred -----------------HHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHhhccc
Confidence 334668889999999999999999999999999999988888777776665543
No 81
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=100.00 E-value=6.3e-43 Score=369.52 Aligned_cols=245 Identities=22% Similarity=0.348 Sum_probs=221.0
Q ss_pred CCceeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCH-HHHHHhhcCceeccCc-c
Q 004972 303 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQ-DKANNALKMLKGVLDY-S 380 (721)
Q Consensus 303 ~~~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~i~~~~~~-~ 380 (721)
+.++||+|||+|+||++||..|+++|++|++||++++.++++.+++++.++.+++.|.++. ......++++++++++ +
T Consensus 4 ~~~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~~~~~e 83 (319)
T 2dpo_A 4 PAAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAE 83 (319)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHH
T ss_pred CCCceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEeCCHHH
Confidence 4578999999999999999999999999999999999999999999998888888774431 0113456788888888 5
Q ss_pred ccCCCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhcccCCCCcEEEecCCCCCCCCCeeEEecCCC
Q 004972 381 EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTER 460 (721)
Q Consensus 381 ~l~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~~l~~~~~~~~r~ig~h~~~p~~~~~lvEiv~~~~ 460 (721)
++++||+||+||||+.++|+.+++++.+++++++||+||||+++++++++.+.++.+++|+|||+|++.++++|+++++.
T Consensus 84 av~~aDlVieavpe~~~~k~~v~~~l~~~~~~~~Ii~s~tS~i~~~~la~~~~~~~r~ig~Hp~~P~~~~~lveiv~g~~ 163 (319)
T 2dpo_A 84 AVEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCLLPSKLFTGLAHVKQCIVAHPVNPPYYIPLVELVPHPE 163 (319)
T ss_dssp HTTTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSSCCHHHHHTTCTTGGGEEEEEECSSTTTCCEEEEEECTT
T ss_pred HHhcCCEEEEeccCCHHHHHHHHHHHHhhCCCCeEEEEeCCChHHHHHHHhcCCCCCeEEeecCCchhhcceEEEeCCCC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCeeEEE-cCCCchhhhhhhhHHHHHHHHHHHcCC-CHHHHHHHH-HhcCCC---ccHHHHHHh
Q 004972 461 TSAQVILDLMTVGKIIKKVPVVV-GNCTGFAVNRAFFPYSQSARLLVSLGV-DVFRIDSAI-RSFGLP---IGPFQLLDL 534 (721)
Q Consensus 461 t~~e~~~~~~~l~~~lG~~~v~v-~d~~gfi~nRl~~~~~~Ea~~l~~~Gv-~~~~ID~a~-~~~G~p---~Gpf~~~D~ 534 (721)
|++++++.+.++++.+|++|+++ ++.|||++||++.++++||++++++|+ ++++||+++ .++|+| +|||+++|+
T Consensus 164 t~~e~~~~~~~l~~~lGk~~v~v~~~~~Gfi~Nrll~a~~~EA~~l~~~g~~~~~~id~a~~~g~g~~~a~~GP~~~~dl 243 (319)
T 2dpo_A 164 TSPATVDRTHALMRKIGQSPVRVLKEIDGFVLNRLQYAIISEAWRLVEEGIVSPSDLDLVMSDGLGMRYAFIGPLETMHL 243 (319)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEECSSCCTTTTHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHTTHHHHHTTSCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCEEEEECCCcCCchHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhCCCCCccccCHHHHHHh
Confidence 99999999999999999999999 689999999999999999999999976 999999999 789987 899999999
Q ss_pred hchHHHHHHHHHHH
Q 004972 535 AGYGVAAATSKEFD 548 (721)
Q Consensus 535 ~Gld~~~~~~~~l~ 548 (721)
+| +.+.+.++.+.
T Consensus 244 ~g-~g~~~~~~~~~ 256 (319)
T 2dpo_A 244 NA-EGMLSYSDRYS 256 (319)
T ss_dssp TT-TSHHHHHHHHH
T ss_pred cC-chHHHHHHHHh
Confidence 98 66666665553
No 82
>2np9_A DPGC; protein inhibitor complex, oxidoreductase; HET: YE1; 2.45A {Streptomyces toyocaensis} PDB: 2pg8_A*
Probab=100.00 E-value=1.3e-43 Score=384.05 Aligned_cols=243 Identities=23% Similarity=0.217 Sum_probs=199.8
Q ss_pred CcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeC--------C-CCCcCCCCchhhhhc
Q 004972 4 PRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGN--------G-GRFSGGFDINVFQKV 73 (721)
Q Consensus 4 ~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~--------g-~~F~aG~Dl~~~~~~ 73 (721)
+.|.++. +++|++||||||+ .|+||.+|+.+|.+++++++.|+++|+|||||. | ++||+|+|++++...
T Consensus 167 ~~v~~e~-~~gVa~ItLNRP~k~NALs~~m~~eL~~al~~~~~D~~VRvVVLtG~~~~~p~~aG~~~FcAG~DL~~~~~~ 245 (440)
T 2np9_A 167 EAVHLER-RDGVARLTMCRDDRLNAEDGQQVDDMETAVDLALLDPGVRVGLLRGGVMSHPRYRGKRVFSAGINLKYLSQG 245 (440)
T ss_dssp SSEEEEE-ETTEEEEEECCTTTTTCBCHHHHHHHHHHHHHHHHCTTCSEEEEEECBCCSTTTTTCBCCBCCBCHHHHHTT
T ss_pred ceEEEEE-ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCccccccCCCccccCCcchhhhhcc
Confidence 4688888 7899999999995 799999999999999999999999999999994 6 799999999998643
Q ss_pred cCCCccc---ccchHHHHHHHHHH------------hhCCCcEEEEECCcccccchHhhhhcCEEEeeCCceEeCccccc
Q 004972 74 HGAGDVS---LMPDVSVELVVNLI------------EDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTL 138 (721)
Q Consensus 74 ~~~~~~~---~~~~~~~~~~~~~l------------~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~a~~~~pe~~~ 138 (721)
....... ......+.++ +.+ .++||||||+|||+|+|||++|+++||+||++++++|++||+++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~pkPvIAAVnG~A~GGG~eLALaCDirIAae~A~Fglpev~l 324 (440)
T 2np9_A 246 GISLVDFLMRRELGYIHKLV-RGVLTNDDRPGWWHSPRIEKPWVAAVDGFAIGGGAQLLLVFDRVLASSDAYFSLPAAKE 324 (440)
T ss_dssp CCCTTTTHHHHHHTHHHHHH-HCEECCSCSTTTTTCCEECCCEEEEECSEEETHHHHHGGGCSEEEEETTCEEECCCTTT
T ss_pred CcchhhhhhHHHHHHHHHHH-HHHHhhcccchhhhhhcCCCCEEEEECCcccccchHHHhhCCEEEEcCCCEEECchhcc
Confidence 2111000 0001122333 323 47999999999999999999999999999999999999999999
Q ss_pred Ccccc--ccccccccCHHHHHHHHHcCCCcCHHHHHHcCCccEEcCCchHHHHHHHHHHHHHhcCchhhhhhhccCCCCC
Q 004972 139 GVIPG--TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGS 216 (721)
Q Consensus 139 Gl~P~--~~~l~r~~G~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~ 216 (721)
|++|+ +++|+|++|..+|++|++||++|+|+||+++||||+|||++++++++.+++++++. .
T Consensus 325 Gl~P~~g~~~L~rlvG~~~A~ellLtG~~i~A~EA~~~GLV~~Vvp~~eL~~~a~~~A~~la~---~------------- 388 (440)
T 2np9_A 325 GIIPGAANLRLGRFAGPRVSRQVILEGRRIWAKEPEARLLVDEVVEPDELDAAIERSLTRLDG---D------------- 388 (440)
T ss_dssp CCCCTTHHHHHHHHHHHHHHHHHHHHCCCEETTSGGGGGTCSEEECHHHHHHHHHHHHHTTCS---H-------------
T ss_pred CcCcchHHHHHHHHhhHHHHHHHHHcCCCCCHHHHHHCCCCcEecChHHHHHHHHHHHHHhCH---H-------------
Confidence 99998 88999999999999999999999999999999999999999999999998877632 1
Q ss_pred cHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHhhcCCH---HHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhh
Q 004972 217 LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGG---YSGVLKEAKVFKELVMLDTSRGLVHVFFAQRA 288 (721)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~i~~~~~~~~---~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~ 288 (721)
|+..+|++++.... +. .+.+..|...+..++.|+|++|++.+|++||+
T Consensus 389 -----------------------Av~~~K~~l~~~~~-~~~~~~~~l~~e~~~~~~~~~s~D~~Egv~AFleKR~ 439 (440)
T 2np9_A 389 -----------------------AVLANRRMLNLADE-SPDGFRAYMAEFALMQALRLYGHDVIDKVGRFGGRPP 439 (440)
T ss_dssp -----------------------HHHHHHHHHHHHHS-CHHHHHHHHHHHHHHHHHHHTCHHHHHHHHTCC----
T ss_pred -----------------------HHHHHHHHHHhhhc-chhHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhCCC
Confidence 22345666666544 33 35667778889999999999999999999986
No 83
>3t3w_A Enoyl-COA hydratase; ssgcid, structural genomics, seattle ST genomics center for infectious disease, lyase; 1.80A {Mycobacterium thermoresistibile} PDB: 3ome_A
Probab=100.00 E-value=1.6e-42 Score=360.40 Aligned_cols=201 Identities=27% Similarity=0.331 Sum_probs=171.2
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccCCCcc
Q 004972 1 MAAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDV 79 (721)
Q Consensus 1 m~~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~~~ 79 (721)
|+++.|.++. +++|++||||||+ .|+||.+|+.+|.+++++++.|+++|+|||||.|++||+|+|++++.........
T Consensus 17 ~~~~~v~~~~-~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~F~aG~Dl~~~~~~~~~~~~ 95 (279)
T 3t3w_A 17 RTEMYIDYDV-SDRIATITLNRPEAANAQNPELLDELDAAWTRAAEDNDVSVIVLRANGKHFSAGHDLRGGGPVPDKLTL 95 (279)
T ss_dssp --CCSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEECSSCSBCCBCCC--------CCH
T ss_pred ccCCeEEEEE-ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCCCceeeccChHhhhhcccccch
Confidence 4567899999 7999999999995 7999999999999999999999999999999999999999999998653221111
Q ss_pred c-cc---chHHHHHHHHHHhhCCCcEEEEECCcccccchHhhhhcCEEEeeCCceEeCcccccCcccc-ccccccccCHH
Q 004972 80 S-LM---PDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG-TQRLPRLVGLS 154 (721)
Q Consensus 80 ~-~~---~~~~~~~~~~~l~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~a~~~~pe~~~Gl~P~-~~~l~r~~G~~ 154 (721)
. .+ ......++ .++.++||||||+|||+|+|||++|+++||+||++++++|++||+++|+.|+ ...+++++|..
T Consensus 96 ~~~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~~~~~~~~~~~vG~~ 174 (279)
T 3t3w_A 96 EFIYAHESRRYLEYS-LRWRNVPKPSIAAVQGRCISGGLLLCWPCDLIIAAEDALFSDPVVLMDIGGVEYHGHTWELGPR 174 (279)
T ss_dssp HHHHHHHHHHTHHHH-HHHHHCSSCEEEEECSEEEGGGHHHHTTSSEEEEETTCEEECCGGGGTCSSCSSCCHHHHHCHH
T ss_pred HHHHHHHHHHHHHHH-HHHHhCCCCEEEEECCeEhHHHHHHHHhCCEEEecCCCEEeCcHHhcCCCCchHHHHHhhcCHH
Confidence 0 11 11223444 6689999999999999999999999999999999999999999999999554 33349999999
Q ss_pred HHHHHHHcCCCcCHHHHHHcCCccEEcCCchHHHHHHHHHHHHHhcCch
Q 004972 155 KAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKP 203 (721)
Q Consensus 155 ~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~ 203 (721)
+|++|++||++++|+||+++||||+|||++++++++.++|+++++.+|.
T Consensus 175 ~A~~llltG~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~ 223 (279)
T 3t3w_A 175 KAKEILFTGRAMTAEEVAQTGMVNRVVPRDRLDAETRALAGEIAKMPPF 223 (279)
T ss_dssp HHHHHHHHCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSCHH
T ss_pred HHHHHHHcCCccCHHHHHHCCCCcEeeChHHHHHHHHHHHHHHHcCCHH
Confidence 9999999999999999999999999999999999999999999998864
No 84
>1szo_A 6-oxocamphor hydrolase; enzyme-product complex; HET: CAX; 1.90A {Rhodococcus SP} SCOP: c.14.1.3 PDB: 1o8u_A
Probab=100.00 E-value=1e-42 Score=357.16 Aligned_cols=234 Identities=18% Similarity=0.231 Sum_probs=196.9
Q ss_pred CcEEEEEecCcEEEEEeCCC-CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccCCCccccc
Q 004972 4 PRVTMEVGNDGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLM 82 (721)
Q Consensus 4 ~~v~~~~~~~~v~~i~l~~p-~~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~ 82 (721)
+.+.+++ +++|++|||||| +.|++|.+|+.+|.+++++++.|+++|+|||||.|++||+|+|++++... .......+
T Consensus 16 ~~i~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~-~~~~~~~~ 93 (257)
T 1szo_A 16 ENIRLER-DGGVLLVTVHTEGKSLVWTSTAHDELAYCFHDIACDRENKVVILTGTGPSFCNEIDFTSFNLG-TPHDWDEI 93 (257)
T ss_dssp TTEEEEE-ETTEEEEEECBTTBSCEECHHHHHHHHHHHHHHHHCTTCCEEEEECBTTBSBCEECGGGSCCS-SHHHHHHH
T ss_pred ceEEEEE-ECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCCccccCcCchhhhcC-CHHHHHHH
Confidence 5689999 789999999999 47999999999999999999999999999999999999999999987531 11111111
Q ss_pred chHHHHHHHHHHhhCCCcEEEEECCcccccchHhhhhcCEEEeeCCceEeC-cccccCcccc---ccccccccCHHHHHH
Q 004972 83 PDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGL-PELTLGVIPG---TQRLPRLVGLSKAIE 158 (721)
Q Consensus 83 ~~~~~~~~~~~l~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~a~~~~-pe~~~Gl~P~---~~~l~r~~G~~~a~~ 158 (721)
.....+++ ..+.++||||||+|||+|+ ||++|+++||+||++++++|++ ||+++|++|+ +++|+|++|..+|++
T Consensus 94 ~~~~~~~~-~~l~~~~kPvIAav~G~a~-GG~~LalacD~ria~~~a~f~~~pe~~lGl~p~~g~~~~l~r~vG~~~A~~ 171 (257)
T 1szo_A 94 IFEGQRLL-NNLLSIEVPVIAAVNGPVT-NAPEIPVMSDIVLAAESATFQDGPHFPSGIVPGDGAHVVWPHVLGSNRGRY 171 (257)
T ss_dssp HHHHHHHH-HHHHHCCSCEEEEECSCBC-SSTHHHHTSSEEEEETTCEEECTTSGGGTCCCTTTHHHHHHHHHCHHHHHH
T ss_pred HHHHHHHH-HHHHcCCCcEEEEECCchH-HHHHHHHHCCEEEEeCCCEEecCcccccccCCCccHHHHHHHHcCHHHHHH
Confidence 22234555 6689999999999999999 5999999999999999999999 9999999997 789999999999999
Q ss_pred HHHcCCCcCHHHHHHcCCccEEcCCchHHHHHHHHHHHHHhcCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCCC
Q 004972 159 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 238 (721)
Q Consensus 159 l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (721)
|++||++++|+||+++||||+|||++++.+++.++|+++++.+|.++
T Consensus 172 llltG~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~--------------------------------- 218 (257)
T 1szo_A 172 FLLTGQELDARTALDYGAVNEVLSEQELLPRAWELARGIAEKPLLAR--------------------------------- 218 (257)
T ss_dssp HHHTTCEEEHHHHHHHTSCSEEECHHHHHHHHHHHHHHHHTSCHHHH---------------------------------
T ss_pred HHHcCCCCCHHHHHHCCCceEEeChHHHHHHHHHHHHHHHhCCHHHH---------------------------------
Confidence 99999999999999999999999999999999999999999886432
Q ss_pred hhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhh
Q 004972 239 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRA 288 (721)
Q Consensus 239 ~A~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~ 288 (721)
..+|++++.....+++++++.|.. .+++.+|-.+-+
T Consensus 219 ---~~~K~~l~~~~~~~l~~~l~~~~~-----------~eg~~a~~~~~~ 254 (257)
T 1szo_A 219 ---RYARKVLTRQLRRVMEADLSLGLA-----------HEALAAIDLGME 254 (257)
T ss_dssp ---HHHHHHHSHHHHHHHHHHHHHHHH-----------HHHHHHHHHC--
T ss_pred ---HHHHHHHHhhhhccHHHHHHHHHH-----------Hhhhhhhhcccc
Confidence 245666766666566666666543 367888876544
No 85
>2w3p_A Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ring cleaving, burkholderia xenovorans LB400 crotonase; 1.50A {Burkholderia xenovorans}
Probab=100.00 E-value=3.8e-38 Score=342.88 Aligned_cols=201 Identities=24% Similarity=0.320 Sum_probs=179.0
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-----------CCCCCHHHHHHHHHHHHHHhcC-CCceEEEEEe-CCCCCcCCCCchh
Q 004972 3 APRVTMEVGNDGVAIITLINPP-----------VNALAIPIVAGLKDKFEEATSR-DDVKAIVLTG-NGGRFSGGFDINV 69 (721)
Q Consensus 3 ~~~v~~~~~~~~v~~i~l~~p~-----------~Nal~~~~~~~l~~~l~~~~~~-~~v~~vVltg-~g~~F~aG~Dl~~ 69 (721)
+++|.++. +++|++||||||+ .|++|.+|+.+|.+++++++.| +++|+||||| .|+.||+|+|+++
T Consensus 20 ~~~v~ve~-~ggVA~ITLNRPed~~l~~g~~~k~NALs~~ml~eL~~AL~~~~~D~~~VRaVVLTGa~G~~FcAGaDL~e 98 (556)
T 2w3p_A 20 YKHWKLSF-NGPVATLGIDIAEDGGIRDGYKLKLNSYDLGVDIELHDAIQRIRFEHPEVRTVVLTSLKDRVFCSGANIFM 98 (556)
T ss_dssp CSSEEEEE-ETTEEEEEECCCTTCCSSSSCCCCTTEECHHHHHHHHHHHHHHHHHCTTCCEEEEEESSSSEEECEECHHH
T ss_pred CceEEEEe-eCCEEEEEEecccccccccccCCCCCCCCHHHHHHHHHHHHHHHhCCCCceEEEEeCCCCCcccCCcCHHH
Confidence 35688998 7899999999995 6999999999999999999999 9999999999 8999999999999
Q ss_pred hhhccCCCcccccchHHHHHHHHHH----hhCCCcEEEEECCcccccchHhhhhcCEEEeeCC--ceEeCcccc-cCccc
Q 004972 70 FQKVHGAGDVSLMPDVSVELVVNLI----EDCKKPIVAAVEGLALGGGLELAMGCHARIAAPK--TQLGLPELT-LGVIP 142 (721)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~--a~~~~pe~~-~Gl~P 142 (721)
+...... ....+....++++ ..| .++||||||+|||+|+|||++|+++||+||++++ ++|++||++ +|++|
T Consensus 99 l~~~~~~-~~~~~~~~~~~l~-~~L~~a~~~~pKPVIAAVnG~AlGGGleLALACD~rIAse~~~A~FglPEv~~LGL~P 176 (556)
T 2w3p_A 99 LGLSTHA-WKVNFCKFTNETR-NGLEDSSRHSGLKFLAAVNGACAGGGYELALACDEIYLVDDRSSSVSLPEVPLLGVLP 176 (556)
T ss_dssp HHHSCHH-HHHHHHHHHHHHH-HHHHHHHHHTSCEEEEEECSEEETHHHHHHHHSSEEEEECSSSCEEECCHHHHHSSCC
T ss_pred HhhcccH-HHHHHHHHHHHHH-HHHHHHHhcCCCCEEEEECCeechhhHHHHHhCCEEEEcCCCCcEEecccccccCCCC
Confidence 8653211 1111222334555 567 8999999999999999999999999999999999 999999999 99999
Q ss_pred c---ccccc--cccCHHHHHHHHHcCCCcCHHHHHHcCCccEEcCCchHHHHHHHHHHHHHhcCchhhh
Q 004972 143 G---TQRLP--RLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIR 206 (721)
Q Consensus 143 ~---~~~l~--r~~G~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~~~ 206 (721)
+ +++|+ |++|..+|++|+++|++++|+||+++||||+|||++++++++.++|+++++.+|.+++
T Consensus 177 g~Ggt~rLp~~RlVG~~rA~eLlLTGr~isA~EAl~lGLVdeVVp~~eL~~~A~~lA~~LA~~~p~Av~ 245 (556)
T 2w3p_A 177 GTGGLTRVTDKRKVRHDRADIFCTVVEGVRGERAKAWRLVDEVVKPNQFDQAIQARALELAAQSDRPAH 245 (556)
T ss_dssp TTTHHHHHHHTSCCCHHHHHHHTTCSSCEEHHHHHHTTSCSEEECHHHHHHHHHHHHHHHHTTCCCCTT
T ss_pred CccHHHHHHhhccCCHHHHHHHHHcCCCCCHHHHHHCCCceEEeChhHHHHHHHHHHHHHHcCChHHHh
Confidence 7 89999 9999999999999999999999999999999999999999999999999999886654
No 86
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=99.89 E-value=8.8e-23 Score=227.05 Aligned_cols=150 Identities=11% Similarity=0.085 Sum_probs=136.4
Q ss_pred cCCCCCHHHHhcccCCCCcEEEecCCCCCCCCCeeEEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCchhhhhhhhHH
Q 004972 419 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPY 498 (721)
Q Consensus 419 ~ts~~~i~~l~~~~~~~~r~ig~h~~~p~~~~~lvEiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~~gfi~nRl~~~~ 498 (721)
.+++.+.++. ...+|.++++.|+++ ++++|+++++.|++++++.+..|++.+|+.|+.++|.||||+||++.++
T Consensus 324 ~~~~~~~~~~--~~~~~~~~v~~~~~~----~~~vev~~~~~t~~~~~~~~~~~~~~~gk~~~~~~d~~g~i~~Rll~~~ 397 (483)
T 3mog_A 324 ETQGETAQAL--AIRLARPVVVIDKMA----GKVVTIAAAAVNPDSATRKAIYYLQQQGKTVLQIADYPGMLIWRTVAMI 397 (483)
T ss_dssp ECSSSCHHHH--HHHHTSCEEEEECCS----SSEEEEEECTTSCHHHHHHHHHHHHTTTCEEEECCCCTTTTHHHHHHHH
T ss_pred ccCCcchHHH--hhccccceeeeeccc----cceEEEecCCCCCHHHHHHHHHHHHHcCCceeeecccccHHHHHHHHHH
Confidence 5667777766 345688999999988 7899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCC-CHHHHHHHH-HhcCCCccHHHHHHhhchHHHHHHHHHHHHhCCC-CCCCcHHHHHHHHcCCCCccc
Q 004972 499 SQSARLLVSLGV-DVFRIDSAI-RSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPD-RSFQSPLVDLLLKSGRNGKAN 574 (721)
Q Consensus 499 ~~Ea~~l~~~Gv-~~~~ID~a~-~~~G~p~Gpf~~~D~~Gld~~~~~~~~l~~~~~~-~~~~~~~l~~~v~~G~~G~k~ 574 (721)
+|||++++++|+ +++|||.++ .++|||+|||+++|.+|+|+++++++.+++.+++ ++.|+++|++|+++|++|..-
T Consensus 398 ~nEA~~~l~eGvas~~diD~a~~~G~G~P~GPl~~~D~~Gld~~~~~~~~l~~~~g~~~~~p~~lL~~~v~~G~~~~~~ 476 (483)
T 3mog_A 398 INEALDALQKGVASEQDIDTAMRLGVNYPYGPLAWGAQLGWQRILRLLENLQHHYGEERYRPCSLLRQRALLESGYESE 476 (483)
T ss_dssp HHHHHHHHHTTSSCHHHHHHHHHHHSCCSSCHHHHHHHHCHHHHHHHHHHHHHHHCCGGGCCCHHHHHHHHHHTCC---
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHhCCCCCCCHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHcCCCCCCC
Confidence 999999999999 999999999 9999999999999999999999999999999987 455999999999999865443
No 87
>3ctv_A HBD-10, 3-hydroxyacyl-COA dehydrogenase; structural genomics, APC7539, PSI-2, protein structure initiative; 2.46A {Archaeoglobus fulgidus dsm 4304}
Probab=99.88 E-value=8.3e-24 Score=187.51 Aligned_cols=103 Identities=20% Similarity=0.153 Sum_probs=85.5
Q ss_pred HcCCeeE-EEcCCCchhhhhhhhHHHHHHHHHHHcCC-CHHHHHHHH-HhcCCCccHHHHHHhhchHHHHHHHHHHHHhC
Q 004972 475 IIKKVPV-VVGNCTGFAVNRAFFPYSQSARLLVSLGV-DVFRIDSAI-RSFGLPIGPFQLLDLAGYGVAAATSKEFDKAF 551 (721)
Q Consensus 475 ~lG~~~v-~v~d~~gfi~nRl~~~~~~Ea~~l~~~Gv-~~~~ID~a~-~~~G~p~Gpf~~~D~~Gld~~~~~~~~l~~~~ 551 (721)
.++|.+| +++|.||||+||++.+++|||++++++|+ +++|||.++ .++|||+|||+++|.+|+|+++++++.+++.+
T Consensus 3 ~~~K~~v~~~~d~~gfi~nRll~~~~~eA~~ll~eGva~~~dID~a~~~g~G~p~GPf~~~D~~Gld~~~~~~~~l~~~~ 82 (110)
T 3ctv_A 3 SKGRPQIDSSKATDKINPMDFTFVEINEAVKLVEMGVATPQDIDTAIKLGLNRPFGPFELAKQFGAEQIAKRLEELAKQF 82 (110)
T ss_dssp --------------CCCHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHTTCSSCHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred CCCCCCcccCCCCccHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4688999 88999999999999999999999999997 999999999 89999999999999999999999999999988
Q ss_pred CC-CCCCcHHHHHHHHcCCCCcccCcc
Q 004972 552 PD-RSFQSPLVDLLLKSGRNGKANGKG 577 (721)
Q Consensus 552 ~~-~~~~~~~l~~~v~~G~~G~k~g~G 577 (721)
++ ++.|+++|++|+++|++|+|||+|
T Consensus 83 g~~~~~p~~~L~~~v~~G~lG~k~g~G 109 (110)
T 3ctv_A 83 GKKIFEPAKTLKEGKLEELLKAGKAEG 109 (110)
T ss_dssp CCGGGSCCHHHHTTTHHHHHHHHHHC-
T ss_pred CCCcCCCCHHHHHHHHcCCCCccCCCC
Confidence 87 555899999999999999999998
No 88
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=99.79 E-value=6.4e-20 Score=194.52 Aligned_cols=204 Identities=17% Similarity=0.205 Sum_probs=160.9
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCC-ceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCccccCC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 384 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~ 384 (721)
+||+|||+|.||+++|..|+.+|+ +|++||++++.++.....+..... ......++..+++++++++
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~------------~~~~~~~i~~t~d~~a~~~ 72 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMV------------MFGSTSKVIGTDDYADISG 72 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHH------------HHTCCCCEEEESCGGGGTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhh------------hcCCCcEEEECCCHHHhCC
Confidence 589999999999999999999999 999999999887753211111100 0011235777778888999
Q ss_pred CCEEEEcc--------------cCChHHHHHHHHHHHhhCCCCeEE--EecCCCCCHHHHhcccCC-CCcEEEecCCCCC
Q 004972 385 VDMVIEAV--------------IESVPLKQKIFSELEKACPPHCIL--ATNTSTIDLNIVGEKTSS-QDRIIGAHFFSPA 447 (721)
Q Consensus 385 aDlVIeav--------------pe~~~~k~~v~~~l~~~~~~~~ii--~s~ts~~~i~~l~~~~~~-~~r~ig~h~~~p~ 447 (721)
||+||+|+ +++..+++++++++.++++ ++++ +||++.+....+.+.... |+|++|+
T Consensus 73 aDiVi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~~-~~iii~~sNp~~~~~~~~~~~~~~~~~rviG~------ 145 (317)
T 2ewd_A 73 SDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCP-NAFVICITNPLDVMVSHFQKVSGLPHNKVCGM------ 145 (317)
T ss_dssp CSEEEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHCT-TSEEEECCSSHHHHHHHHHHHHCCCGGGEEES------
T ss_pred CCEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHCC-CcEEEEeCChHHHHHHHHHHhhCCCHHHEEec------
Confidence 99999999 7888999999999999975 7766 567666666666666655 6788875
Q ss_pred CCCCeeEEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCchhhhh---hhhHHHHHH-------HHHHHcCC-CHHHHH
Q 004972 448 HVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNR---AFFPYSQSA-------RLLVSLGV-DVFRID 516 (721)
Q Consensus 448 ~~~~lvEiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~~gfi~nR---l~~~~~~Ea-------~~l~~~Gv-~~~~ID 516 (721)
.|+.++......+.+.+|+. .++.+||++|| .++++++++ ..++++|+ +++++|
T Consensus 146 ------------~t~ld~~r~~~~la~~lg~~---~~~v~~~v~g~Hg~~~~~~~~~a~v~g~~~~~~~~~g~~~~~~id 210 (317)
T 2ewd_A 146 ------------AGVLDSSRFRTFIAQHFGVN---ASDVSANVIGGHGDGMVPATSSVSVGGVPLSSFIKQGLITQEQID 210 (317)
T ss_dssp ------------CHHHHHHHHHHHHHHHHTSC---GGGEECCEEBCSSTTCEECGGGCEETTEEHHHHHHTTSSCHHHHH
T ss_pred ------------cCcHHHHHHHHHHHHHhCcC---hhhceEEEEecCCCceeEEeeccccCCEEHHHHHhccCCCHHHHH
Confidence 36788888888899999987 48999999999 889999998 88999985 999999
Q ss_pred HHHHhcCCCccHHHHHHhhch-HHHHHHHH
Q 004972 517 SAIRSFGLPIGPFQLLDLAGY-GVAAATSK 545 (721)
Q Consensus 517 ~a~~~~G~p~Gpf~~~D~~Gl-d~~~~~~~ 545 (721)
.++... ++|||+++|..|. ++.+.+..
T Consensus 211 ~~~~~~--~~~~~ei~~~~g~g~~~~~~a~ 238 (317)
T 2ewd_A 211 EIVCHT--RIAWKEVADNLKTGTAYFAPAA 238 (317)
T ss_dssp HHHHHH--HHHHHHHHHHHSSSCCCHHHHH
T ss_pred HHHHHH--HhhHHHHHHhhcCCchHHHHHH
Confidence 998433 7899999999887 55544433
No 89
>3bf0_A Protease 4; bacterial, hydrolase, inner membrane, membrane, transmembrane; 2.55A {Escherichia coli} PDB: 3bez_A
Probab=99.79 E-value=4.5e-20 Score=210.51 Aligned_cols=166 Identities=20% Similarity=0.229 Sum_probs=141.4
Q ss_pred cCcEEEEEeCCCC-CCC--CCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccCCCcccccchHHHH
Q 004972 12 NDGVAIITLINPP-VNA--LAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVE 88 (721)
Q Consensus 12 ~~~v~~i~l~~p~-~Na--l~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~ 88 (721)
+++|++|++|+|. .|+ ++..+.++|.++|++++.|+++|+|||++.+ .|+|+.... ...+
T Consensus 300 ~~~VavI~l~g~i~~n~~~~~~~~~~~l~~~L~~a~~d~~vkaVVL~i~s----pGG~~~~~~-------------~i~~ 362 (593)
T 3bf0_A 300 GDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNS----PGGSVTASE-------------VIRA 362 (593)
T ss_dssp SCEEEEEEEEEEEESSSSCTTSEEHHHHHHHHHHHHHCTTEEEEEEEEEE----EEECHHHHH-------------HHHH
T ss_pred CCCEEEEEEeeeecCCccccchhHHHHHHHHHHHHHhCCCCCEEEEEecC----CCCCHHHHH-------------HHHH
Confidence 5789999999994 677 6888999999999999999999999999873 578876421 1234
Q ss_pred HHHHHHhhCCCcEEEEECCcccccchHhhhhcCEEEeeCCceEeCccc------------ccCcccc-------------
Q 004972 89 LVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPEL------------TLGVIPG------------- 143 (721)
Q Consensus 89 ~~~~~l~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~a~~~~pe~------------~~Gl~P~------------- 143 (721)
.+ +.+..++|||||+|+|.|.|||+.|+++||+|+|++++.||.+++ ++|+.|+
T Consensus 363 ~i-~~l~~~~kPVia~v~g~AasgG~~iA~aaD~iva~p~a~~Gsigv~~~~~~~~~~~~klGi~~~~~~~g~~k~~~~~ 441 (593)
T 3bf0_A 363 EL-AAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVENSLDSIGVHTDGVSTSPLADVSIT 441 (593)
T ss_dssp HH-HHHHHTTCCEEEEEEEEEETHHHHTTTTCSEEEECTTCEEECCCEEEEEEECHHHHHHTTCEEECCBSCGGGCCCTT
T ss_pred HH-HHHHhCCCCEEEEECCChHHHHHHHHHhCCEEEECCCCEeecceeEEecCchHHHHHhcCceeeeeecccccccCcC
Confidence 45 557889999999999999999999999999999999999999985 5888752
Q ss_pred ---c---------------cccccccCHHH-----HHHHHHcCCCcCHHHHHHcCCccEEcCCchHHHHHHHHHH
Q 004972 144 ---T---------------QRLPRLVGLSK-----AIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWAL 195 (721)
Q Consensus 144 ---~---------------~~l~r~~G~~~-----a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~ 195 (721)
+ .++.+.++..+ +.+++++|+.++|+||+++||||++++.+++.+++.+++.
T Consensus 442 ~~~t~~~~~~l~~~l~~~~~~f~~~V~~~Rg~~~~a~~~l~~G~~~ta~eA~~~GLVD~v~~~~~~~~~a~~~a~ 516 (593)
T 3bf0_A 442 RALPPEAQLMMQLSIENGYKRFITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAK 516 (593)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHTTCTTCEEEHHHHHHHTSCSEECCHHHHHHHHHHHSC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCCCcCHHHHHHCCCCcCccCHHHHHHHHHHHcC
Confidence 1 45677888888 9999999999999999999999999998888887777543
No 90
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=99.78 E-value=2.2e-18 Score=179.25 Aligned_cols=189 Identities=15% Similarity=0.087 Sum_probs=147.1
Q ss_pred ceeEEEEcCCCCcHHHHHHHHHCCC---ceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-c
Q 004972 305 VRKVAVIGGGLMGSGIATAHILNNI---YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-S 380 (721)
Q Consensus 305 ~~kI~VIG~G~mG~~iA~~la~~G~---~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~ 380 (721)
.+||+|||+|.||.+|+..|+++|+ +|++||+++++++...+. . .+..+++. +
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~----------------------~-gi~~~~~~~~ 59 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEK----------------------C-GVHTTQDNRQ 59 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHT----------------------T-CCEEESCHHH
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHH----------------------c-CCEEeCChHH
Confidence 4689999999999999999999999 999999999987765321 0 23444444 6
Q ss_pred ccCCCCEEEEcccCChHHHHHHHHHHHhh-CCCCeEEEecCCCCCHHHHhcccCCCCcEEEecCCCCCCCCCeeEE-ecC
Q 004972 381 EFKDVDMVIEAVIESVPLKQKIFSELEKA-CPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI-VRT 458 (721)
Q Consensus 381 ~l~~aDlVIeavpe~~~~k~~v~~~l~~~-~~~~~ii~s~ts~~~i~~l~~~~~~~~r~ig~h~~~p~~~~~lvEi-v~~ 458 (721)
.+++||+||+||| ++.+.++++++.++ ++++++|+|++++++++.+...+..+.++++.||++|...+..+++ +++
T Consensus 60 ~~~~aDvVilav~--p~~~~~vl~~l~~~~l~~~~iiiS~~agi~~~~l~~~l~~~~~vvr~mPn~p~~v~~g~~~l~~~ 137 (280)
T 3tri_A 60 GALNADVVVLAVK--PHQIKMVCEELKDILSETKILVISLAVGVTTPLIEKWLGKASRIVRAMPNTPSSVRAGATGLFAN 137 (280)
T ss_dssp HHSSCSEEEECSC--GGGHHHHHHHHHHHHHTTTCEEEECCTTCCHHHHHHHHTCCSSEEEEECCGGGGGTCEEEEEECC
T ss_pred HHhcCCeEEEEeC--HHHHHHHHHHHHhhccCCCeEEEEecCCCCHHHHHHHcCCCCeEEEEecCChHHhcCccEEEEeC
Confidence 7899999999998 78889999999998 8999899999999999999998888889999999999999988875 568
Q ss_pred CCCCHHHHHHHHHHHHHcCCeeEEEcCCC--chh-----hhhhhhHHHHHHHH--HHHcCCCHHHHHHHH
Q 004972 459 ERTSAQVILDLMTVGKIIKKVPVVVGNCT--GFA-----VNRAFFPYSQSARL--LVSLGVDVFRIDSAI 519 (721)
Q Consensus 459 ~~t~~e~~~~~~~l~~~lG~~~v~v~d~~--gfi-----~nRl~~~~~~Ea~~--l~~~Gv~~~~ID~a~ 519 (721)
+.++++.++.+.++++.+|+.+++..+.. .+. ..-+++ ++.|++. .+..|+++++.-+++
T Consensus 138 ~~~~~~~~~~v~~l~~~iG~~~~v~~E~~~d~~talsgsgpa~~~-~~~eal~~a~v~~Gl~~~~a~~l~ 206 (280)
T 3tri_A 138 ETVDKDQKNLAESIMRAVGLVIWVSSEDQIEKIAALSGSGPAYIF-LIMEALQEAAEQLGLTKETAELLT 206 (280)
T ss_dssp TTSCHHHHHHHHHHHGGGEEEEECSSHHHHHHHHHHTTSHHHHHH-HHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHCCCeEEECCHHHhhHHHHHhccHHHHHH-HHHHHHHHHHHHcCCCHHHHHHHH
Confidence 88999999999999999998554323310 000 011111 2234432 345688888776665
No 91
>3rst_A Signal peptide peptidase SPPA; alpha/beta protein fold, signal peptide digestion, bacterial membrane, hydrolase; 2.37A {Bacillus subtilis}
Probab=99.75 E-value=5.2e-18 Score=171.81 Aligned_cols=165 Identities=19% Similarity=0.192 Sum_probs=124.8
Q ss_pred cCcEEEEEeCCC-CCCC-----CC--HHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccCCCcccccc
Q 004972 12 NDGVAIITLINP-PVNA-----LA--IPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMP 83 (721)
Q Consensus 12 ~~~v~~i~l~~p-~~Na-----l~--~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 83 (721)
+++|++|+++.+ ..+. ++ .-..++|.++++++.+|+++|+|||++. |.|+|+....
T Consensus 2 ~~~iavi~i~G~I~~~~~~~~~~~~~~~~~~~l~~~l~~a~~d~~v~~ivL~~~----s~Gg~~~~~~------------ 65 (240)
T 3rst_A 2 SSKIAVLEVSGTIQDNGDSSSLLGADGYNHRTFLKNLERAKDDKTVKGIVLKVN----SPGGGVYESA------------ 65 (240)
T ss_dssp CCEEEEEEEESCBCCC---------CCCCHHHHHHHHHHHHHCTTEEEEEEEEE----ECCBCHHHHH------------
T ss_pred CCeEEEEEEEEEEcCCCCcCcccccCCcCHHHHHHHHHHHHhCCCcEEEEEEec----CCCCCHHHHH------------
Confidence 578999999877 2221 11 0135899999999999999999999986 6788886532
Q ss_pred hHHHHHHHHHHhh-CCCcEEEEECCcccccchHhhhhcCEEEeeCCceEeCc---------------------ccccCcc
Q 004972 84 DVSVELVVNLIED-CKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP---------------------ELTLGVI 141 (721)
Q Consensus 84 ~~~~~~~~~~l~~-~~~p~Iaav~G~a~GgG~~lalacD~ria~~~a~~~~p---------------------e~~~Gl~ 141 (721)
...+.+ +.+.. ++|||||+++|.|.|||++|+++||+|++++++.|+++ +++.|..
T Consensus 66 -~i~~~l-~~~~~~~~kPVia~v~g~a~~gG~~lA~a~D~i~a~~~a~~g~~Gv~~~~~~~~~~l~k~Gi~~~~~~~G~~ 143 (240)
T 3rst_A 66 -EIHKKL-EEIKKETKKPIYVSMGSMAASGGYYISTAADKIFATPETLTGSLGVIMESVNYSKLADKLGISFETIKSGAH 143 (240)
T ss_dssp -HHHHHH-HHHHHHHCCCEEEEEEEEEETHHHHHHTTSSEEEECTTCEEECCCCEEEEEECHHHHHHHTCEEEEEESSTT
T ss_pred -HHHHHH-HHHHHhCCCeEEEEECCeehHhHHHHHHhCCeeEECCCCeEeccceeeEecCHHHHHHHcCCeEEEEecccc
Confidence 123444 44666 89999999999999999999999999999999999999 4445544
Q ss_pred cc--cc---------------------------ccccccCHHHHHHHHHcCCCcCHHHHHHcCCccEEcCCchHHHHHHH
Q 004972 142 PG--TQ---------------------------RLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRL 192 (721)
Q Consensus 142 P~--~~---------------------------~l~r~~G~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~ 192 (721)
++ .. ...|.+......+ +++|+.+++++|+++||||++.+.+++.+.+.+
T Consensus 144 k~~~~p~~~~s~~~~~~~~~~l~~~~~~f~~~Va~~R~l~~~~~~~-~~~g~~~~a~~A~~~GLVD~i~~~~~~~~~~~~ 222 (240)
T 3rst_A 144 ADIMSPSREMTKEEKNIMQSMVDNSYEGFVDVISKGRGMPKAEVKK-IADGRVYDGRQAKKLNLVDELGFYDDTITAMKK 222 (240)
T ss_dssp TTTTCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHH-HCSSCEEEHHHHHHTTSSSEECCHHHHHHHHHH
T ss_pred ccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHH-HhcCCcccHHHHHHcCCCcccCCHHHHHHHHHH
Confidence 43 11 1123345444444 789999999999999999999998887777766
Q ss_pred HHH
Q 004972 193 WAL 195 (721)
Q Consensus 193 ~a~ 195 (721)
++.
T Consensus 223 ~~~ 225 (240)
T 3rst_A 223 DHK 225 (240)
T ss_dssp HCG
T ss_pred HhC
Confidence 553
No 92
>3ctv_A HBD-10, 3-hydroxyacyl-COA dehydrogenase; structural genomics, APC7539, PSI-2, protein structure initiative; 2.46A {Archaeoglobus fulgidus dsm 4304}
Probab=99.75 E-value=9.6e-19 Score=154.88 Aligned_cols=85 Identities=27% Similarity=0.437 Sum_probs=79.6
Q ss_pred ChHHHHHHHHHHHHHHHHHHhhcCcCCChhHHHHHHHHccCCCCCCCcHhHHHHHhCHHHHHHHHHHHHHhhCC-CCCCC
Q 004972 616 TEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN-FFKPS 694 (721)
Q Consensus 616 ~~~~i~~r~~~~~~~ea~~~l~~gv~~~~~~iD~~~~~g~g~~~~~~Gp~~~~d~~G~~~~~~~~~~~~~~~~~-~~~p~ 694 (721)
++++|.||++.+++|||++|++|||+ +++|||.+|++|+|||+ |||+++|.+|+|.++++++.+.+.+++ +|+|+
T Consensus 15 ~~gfi~nRll~~~~~eA~~ll~eGva-~~~dID~a~~~g~G~p~---GPf~~~D~~Gld~~~~~~~~l~~~~g~~~~~p~ 90 (110)
T 3ctv_A 15 TDKINPMDFTFVEINEAVKLVEMGVA-TPQDIDTAIKLGLNRPF---GPFELAKQFGAEQIAKRLEELAKQFGKKIFEPA 90 (110)
T ss_dssp --CCCHHHHHHHHHHHHHHHHHTTSS-CHHHHHHHHHHHTTCSS---CHHHHHHHHCHHHHHHHHHHHHHHHCCGGGSCC
T ss_pred CccHHHHHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHHcCCCCc---cHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCC
Confidence 57899999999999999999999999 99999999999999999 999999999999999999999999998 89999
Q ss_pred HHHHHHHHcC
Q 004972 695 RFLEERATKG 704 (721)
Q Consensus 695 ~~l~~~~~~g 704 (721)
++|++|+++|
T Consensus 91 ~~L~~~v~~G 100 (110)
T 3ctv_A 91 KTLKEGKLEE 100 (110)
T ss_dssp HHHHTTTHHH
T ss_pred HHHHHHHHcC
Confidence 9999999543
No 93
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=99.74 E-value=9.2e-18 Score=173.51 Aligned_cols=211 Identities=10% Similarity=0.026 Sum_probs=156.2
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCc-eEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cccC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIY-VVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 383 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~-V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~ 383 (721)
+||+|||+|.||..+|..|++.|++ |++||++++.++...+.+ .+..++++ +.++
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~-----------------------g~~~~~~~~~~~~ 67 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKV-----------------------EAEYTTDLAEVNP 67 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHT-----------------------TCEEESCGGGSCS
T ss_pred CeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHc-----------------------CCceeCCHHHHhc
Confidence 5899999999999999999999999 999999999876643210 13345555 5678
Q ss_pred CCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhcccCCCCcEEEecCCCCC-----CCCCeeEEecC
Q 004972 384 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPA-----HVMPLLEIVRT 458 (721)
Q Consensus 384 ~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~~l~~~~~~~~r~ig~h~~~p~-----~~~~lvEiv~~ 458 (721)
+||+||+|+|++ ...+++.++.+.++++++|++++++.+.+.+.+.+.. .-..|+++|. ..++.++++.
T Consensus 68 ~~Dvvi~av~~~--~~~~v~~~l~~~~~~~~ivv~~s~~~~~~~l~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~v- 141 (266)
T 3d1l_A 68 YAKLYIVSLKDS--AFAELLQGIVEGKREEALMVHTAGSIPMNVWEGHVPH---YGVFYPMQTFSKQREVDFKEIPFFI- 141 (266)
T ss_dssp CCSEEEECCCHH--HHHHHHHHHHTTCCTTCEEEECCTTSCGGGSTTTCSS---EEEEEECCCC---CCCCCTTCCEEE-
T ss_pred CCCEEEEecCHH--HHHHHHHHHHhhcCCCcEEEECCCCCchHHHHHHHHh---ccCcCCceecCCCchhhcCCCeEEE-
Confidence 999999999944 4588889998888899999999999988776655543 2235776652 2233344333
Q ss_pred CCCCHHHHHHHHHHHHHcCCeeEEEcCC--Cch-----hhhhhh--hHHHHHHHHHHHcCCCHHHHHHHH-Hh------c
Q 004972 459 ERTSAQVILDLMTVGKIIKKVPVVVGNC--TGF-----AVNRAF--FPYSQSARLLVSLGVDVFRIDSAI-RS------F 522 (721)
Q Consensus 459 ~~t~~e~~~~~~~l~~~lG~~~v~v~d~--~gf-----i~nRl~--~~~~~Ea~~l~~~Gv~~~~ID~a~-~~------~ 522 (721)
..++++.++.+.++++.+|+.++++++. +++ ++|++. ...+.|++. .+.|++++++..++ .. .
T Consensus 142 ~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~eal~-~~~Gl~~~~~~~l~~~~~~~~~~~ 220 (266)
T 3d1l_A 142 EASSTEDAAFLKAIASTLSNRVYDADSEQRKSLHLAAVFTCNFTNHMYALAAELL-KKYNLPFDVMLPLIDETARKVHEL 220 (266)
T ss_dssp EESSHHHHHHHHHHHHTTCSCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHTTCCGGGGHHHHHHHHHHHHHS
T ss_pred ecCCHHHHHHHHHHHHhcCCcEEEeCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHhc
Confidence 2358999999999999999999999764 356 777775 334456632 35699988875544 21 2
Q ss_pred ---CCCccHHHHHHhhchHHHHHHHHH
Q 004972 523 ---GLPIGPFQLLDLAGYGVAAATSKE 546 (721)
Q Consensus 523 ---G~p~Gpf~~~D~~Gld~~~~~~~~ 546 (721)
+.++||+...|..|++.....++.
T Consensus 221 ~~~~~~~GP~~r~d~~~l~~~l~~l~~ 247 (266)
T 3d1l_A 221 EPKTAQTGPAIRYDENVIGNHLRMLAD 247 (266)
T ss_dssp CHHHHCCSTTTTTCHHHHHHHHHHTTT
T ss_pred ChhhhCCCCCccCCHHHHHHHHHHHhc
Confidence 346799999999999998877654
No 94
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=99.71 E-value=6.2e-17 Score=165.38 Aligned_cols=188 Identities=16% Similarity=0.175 Sum_probs=144.5
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCC----ceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-c
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNI----YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-S 380 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~----~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~ 380 (721)
+||+|||+|.||.+++..|+++|+ +|++||+++++++...+.. .+..+++. +
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~-----------------------g~~~~~~~~e 59 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKY-----------------------GLTTTTDNNE 59 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHH-----------------------CCEECSCHHH
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHh-----------------------CCEEeCChHH
Confidence 589999999999999999999998 9999999999877653210 23344454 5
Q ss_pred ccCCCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhcccCCCCcEEEecCCCCCCCCC-eeEEecCC
Q 004972 381 EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMP-LLEIVRTE 459 (721)
Q Consensus 381 ~l~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~~l~~~~~~~~r~ig~h~~~p~~~~~-lvEiv~~~ 459 (721)
.+++||+||+||| +....++++++.++++++++|+|.++++++..+...+..+.++++.||+.|..... ...+++++
T Consensus 60 ~~~~aDvVilav~--~~~~~~v~~~l~~~l~~~~~vvs~~~gi~~~~l~~~~~~~~~~v~~~p~~p~~~~~g~~~~~~~~ 137 (247)
T 3gt0_A 60 VAKNADILILSIK--PDLYASIINEIKEIIKNDAIIVTIAAGKSIESTENAFNKKVKVVRVMPNTPALVGEGMSALCPNE 137 (247)
T ss_dssp HHHHCSEEEECSC--TTTHHHHC---CCSSCTTCEEEECSCCSCHHHHHHHHCSCCEEEEEECCGGGGGTCEEEEEEECT
T ss_pred HHHhCCEEEEEeC--HHHHHHHHHHHHhhcCCCCEEEEecCCCCHHHHHHHhCCCCcEEEEeCChHHHHcCceEEEEeCC
Confidence 6788999999997 77788999999998999999999999999998888877777899999999998887 56677888
Q ss_pred CCCHHHHHHHHHHHHHcCCeeEEEcCCC-----chhhh-hhhhHHHHHHHHH--HHcCCCHHHHHHHH
Q 004972 460 RTSAQVILDLMTVGKIIKKVPVVVGNCT-----GFAVN-RAFFPYSQSARLL--VSLGVDVFRIDSAI 519 (721)
Q Consensus 460 ~t~~e~~~~~~~l~~~lG~~~v~v~d~~-----gfi~n-Rl~~~~~~Ea~~l--~~~Gv~~~~ID~a~ 519 (721)
.++++.++.++++++.+|+ ++++.+.. +.... ..+..++.|++.. ...|+++++..+++
T Consensus 138 ~~~~~~~~~~~~l~~~~G~-~~~~~e~~~d~~~a~~g~gpa~~~~~~eal~~a~~~~Gl~~~~a~~~~ 204 (247)
T 3gt0_A 138 MVTEKDLEDVLNIFNSFGQ-TEIVSEKLMDVVTSVSGSSPAYVYMIIEAMADAAVLDGMPRNQAYKFA 204 (247)
T ss_dssp TCCHHHHHHHHHHHGGGEE-EEECCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhCCC-EEEeCHHHccHHHHHhccHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 8999999999999999998 55554321 11100 1122234466544 35599999888887
No 95
>3viv_A 441AA long hypothetical NFED protein; protein-peptide complex, alpha / beta motif, protease, membr protein stomatin, hydrolase-protein binding complex; 2.25A {Pyrococcus horikoshii} PDB: 3bpp_A 2deo_A
Probab=99.71 E-value=4.8e-17 Score=161.96 Aligned_cols=145 Identities=24% Similarity=0.335 Sum_probs=123.2
Q ss_pred cCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccCCCcccccchHHHHHHH
Q 004972 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVV 91 (721)
Q Consensus 12 ~~~v~~i~l~~p~~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~ 91 (721)
.+.|++|++++ +++..+.+.|.++++.+++ +++++|||+.. |.|+|+... ..++
T Consensus 7 ~~~V~vI~i~g----~I~~~~~~~l~~~l~~a~~-~~~~~Ivl~in----spGG~v~~~----------------~~i~- 60 (230)
T 3viv_A 7 KNIVYVAQIKG----QITSYTYDQFDRYITIAEQ-DNAEAIIIELD----TPGGRADAM----------------MNIV- 60 (230)
T ss_dssp CCEEEEEEEES----CBCHHHHHHHHHHHHHHHH-TTCSEEEEEEE----BSCEEHHHH----------------HHHH-
T ss_pred CCeEEEEEEeC----EECHHHHHHHHHHHHHHhc-CCCCEEEEEEe----CCCcCHHHH----------------HHHH-
Confidence 46799999985 6999999999999999986 46999999875 778876532 2445
Q ss_pred HHHhhCCCcEEEEE---CCcccccchHhhhhcCEEEeeCCceEeCcccccCccc--c-c---------------cccccc
Q 004972 92 NLIEDCKKPIVAAV---EGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIP--G-T---------------QRLPRL 150 (721)
Q Consensus 92 ~~l~~~~~p~Iaav---~G~a~GgG~~lalacD~ria~~~a~~~~pe~~~Gl~P--~-~---------------~~l~r~ 150 (721)
+.|..+++|||++| +|.|.|+|+.|+++||+|+|+++++|+.++...+. | | + ..+++.
T Consensus 61 ~~i~~~~~PVia~v~p~~G~AasaG~~ia~a~d~~~a~p~a~ig~~~p~~~~-~~~G~~~~~~~k~~~~~~~~~~~la~~ 139 (230)
T 3viv_A 61 QRIQQSKIPVIIYVYPPGASAASAGTYIALGSHLIAMAPGTSIGACRPILGY-SQNGSIIEAPPAITNYFIAYIKSLAQE 139 (230)
T ss_dssp HHHHTCSSCEEEEECSTTCEEETHHHHHHHTSSEEEECTTCEEECCCEEEEE-CTTSCEEECCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCCEEEEEecCCCEEhHHHHHHHHhcCceeECCCCEEEeccceecC-CCCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 66889999999999 99999999999999999999999999999987421 2 1 1 136677
Q ss_pred cCH--HHHHHHHHcCCCcCHHHHHHcCCccEEcCC
Q 004972 151 VGL--SKAIEMMLLSKSITSEEGWKLGLIDAVVTS 183 (721)
Q Consensus 151 ~G~--~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~ 183 (721)
.|. ..+.+++.+++.++|+||+++||||+|++.
T Consensus 140 ~Gr~~~~a~~~~~~~~~ltA~EAle~GliD~V~~~ 174 (230)
T 3viv_A 140 SGRNATIAEEFITKDLSLTPEEALKYGVIEVVARD 174 (230)
T ss_dssp TTCCHHHHHHHHHTCCEECHHHHHHTTSCSEECSS
T ss_pred hCcCHHHHHHHHhcCCeecHHHHHHcCCceEecCC
Confidence 885 789999999999999999999999999975
No 96
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=99.70 E-value=2.8e-16 Score=165.85 Aligned_cols=166 Identities=15% Similarity=0.153 Sum_probs=129.7
Q ss_pred CCceeEEEEcCCCCcHHHHHHHHHCCC--ceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-
Q 004972 303 RGVRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY- 379 (721)
Q Consensus 303 ~~~~kI~VIG~G~mG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~- 379 (721)
+.++||+|||+|.||+++|..|+++|+ +|++||++++.++.+. +.|.+ ...++++
T Consensus 31 ~~~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~-----------~~G~~-----------~~~~~~~~ 88 (314)
T 3ggo_A 31 LSMQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV-----------DLGII-----------DEGTTSIA 88 (314)
T ss_dssp CSCSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH-----------HTTSC-----------SEEESCTT
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-----------HCCCc-----------chhcCCHH
Confidence 346799999999999999999999999 9999999998877642 22211 1234555
Q ss_pred c-ccCCCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCC--HHHHhcccCCCCcEEEecCCCCCC--------
Q 004972 380 S-EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID--LNIVGEKTSSQDRIIGAHFFSPAH-------- 448 (721)
Q Consensus 380 ~-~l~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~--i~~l~~~~~~~~r~ig~h~~~p~~-------- 448 (721)
+ .+++||+||+||| .....++++++.+.++++++|++.+|+.. +..+.+.++ .+|++.||+.++.
T Consensus 89 ~~~~~~aDvVilavp--~~~~~~vl~~l~~~l~~~~iv~d~~Svk~~~~~~~~~~l~--~~~v~~hPm~G~e~sG~~~A~ 164 (314)
T 3ggo_A 89 KVEDFSPDFVMLSSP--VRTFREIAKKLSYILSEDATVTDQGSVKGKLVYDLENILG--KRFVGGHPIAGTEKSGVEYSL 164 (314)
T ss_dssp GGGGGCCSEEEECSC--GGGHHHHHHHHHHHSCTTCEEEECCSCCTHHHHHHHHHHG--GGEECEEECCCCCCCSGGGCC
T ss_pred HHhhccCCEEEEeCC--HHHHHHHHHHHhhccCCCcEEEECCCCcHHHHHHHHHhcC--CCEEecCcccCCcccchhhhh
Confidence 4 6899999999999 55677899999999999999998777643 445555443 2899999988653
Q ss_pred ----CCCeeEEecCCCCCHHHHHHHHHHHHHcCCeeEEEcC-CCchhhhhh
Q 004972 449 ----VMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN-CTGFAVNRA 494 (721)
Q Consensus 449 ----~~~lvEiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d-~~gfi~nRl 494 (721)
.+..+.+++++.++++.++.+.++++.+|+.++++++ ....++..+
T Consensus 165 ~~Lf~g~~~il~~~~~~~~~~~~~v~~l~~~~G~~v~~~~~~~hD~~~a~~ 215 (314)
T 3ggo_A 165 DNLYEGKKVILTPTKKTDKKRLKLVKRVWEDVGGVVEYMSPELHDYVFGVV 215 (314)
T ss_dssp TTTTTTCEEEECCCTTSCHHHHHHHHHHHHHTTCEEEECCHHHHHHHHHHH
T ss_pred hhhhcCCEEEEEeCCCCCHHHHHHHHHHHHHcCCEEEEcCHHHHHHHHHHH
Confidence 3567888889889999999999999999999998853 444444443
No 97
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=99.69 E-value=6.2e-17 Score=169.46 Aligned_cols=188 Identities=15% Similarity=0.166 Sum_probs=133.0
Q ss_pred CceeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-ccc
Q 004972 304 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 382 (721)
Q Consensus 304 ~~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l 382 (721)
.|+||+|||+|.||.+||.+|+++||+|++||+++++++... +.| ....+++ +.+
T Consensus 2 ~M~kIgfIGlG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~-----------~~G-------------a~~a~s~~e~~ 57 (300)
T 3obb_A 2 HMKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLV-----------AAG-------------ASAARSARDAV 57 (300)
T ss_dssp -CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHH-----------HTT-------------CEECSSHHHHH
T ss_pred CcCEEEEeeehHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHH-----------HcC-------------CEEcCCHHHHH
Confidence 368999999999999999999999999999999999877642 222 3344555 667
Q ss_pred CCCCEEEEcccCChHHHHHHHH--HHHhhCCCCeEEEecCCCCCHH---HHhcccCCCCcEEEecCCCCCCC--------
Q 004972 383 KDVDMVIEAVIESVPLKQKIFS--ELEKACPPHCILATNTSTIDLN---IVGEKTSSQDRIIGAHFFSPAHV-------- 449 (721)
Q Consensus 383 ~~aDlVIeavpe~~~~k~~v~~--~l~~~~~~~~ii~s~ts~~~i~---~l~~~~~~~~r~ig~h~~~p~~~-------- 449 (721)
++||+||.|+|.+..+...++. .+.+.++++++|++.++ ..+. ++++.+... |++|.+.|-.
T Consensus 58 ~~~dvv~~~l~~~~~v~~V~~~~~g~~~~~~~g~iiId~sT-~~p~~~~~~a~~~~~~----G~~~lDaPVsGg~~~A~~ 132 (300)
T 3obb_A 58 QGADVVISMLPASQHVEGLYLDDDGLLAHIAPGTLVLECST-IAPTSARKIHAAARER----GLAMLDAPVSGGTAGAAA 132 (300)
T ss_dssp TTCSEEEECCSCHHHHHHHHHSSSSSTTSCCC-CEEEECSC-CCHHHHHHHHHHHHTT----TCEEEECCEESCHHHHHH
T ss_pred hcCCceeecCCchHHHHHHHhchhhhhhcCCCCCEEEECCC-CCHHHHHHHHHHHHHc----CCEEEecCCCCCHHHHHh
Confidence 9999999999966665544443 26667788888876444 4443 344444322 5666654422
Q ss_pred CCeeEEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCC-c---hhhhhhhhH----HHHHHHHHHHc-CCCHHHHHHHH-
Q 004972 450 MPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT-G---FAVNRAFFP----YSQSARLLVSL-GVDVFRIDSAI- 519 (721)
Q Consensus 450 ~~lvEiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~~-g---fi~nRl~~~----~~~Ea~~l~~~-Gv~~~~ID~a~- 519 (721)
+.+.-++.| +++++++++++++.+|+.++++++.. | -++|.++.. .+.|++.+.+. |++++.+-.++
T Consensus 133 G~L~imvGG---~~~~~~~~~p~l~~~g~~i~~~G~~G~g~~~Kl~~N~l~~~~~~a~aEa~~la~~~Gld~~~~~~vl~ 209 (300)
T 3obb_A 133 GTLTFMVGG---DAEALEKARPLFEAMGRNIFHAGPDGAGQVAKVCNNQLLAVLMIGTAEAMALGVANGLEAKVLAEIMR 209 (300)
T ss_dssp TCEEEEEES---CHHHHHHHHHHHHHHEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred CCEEEEEeC---CHHHHHHHHHHHHHhCCCEEEeCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHH
Confidence 223444455 78999999999999999999998732 1 244554332 24599999987 99999999888
Q ss_pred HhcC
Q 004972 520 RSFG 523 (721)
Q Consensus 520 ~~~G 523 (721)
.+.+
T Consensus 210 ~~~~ 213 (300)
T 3obb_A 210 RSSG 213 (300)
T ss_dssp TSTT
T ss_pred hCcc
Confidence 4443
No 98
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=99.69 E-value=7.5e-17 Score=169.87 Aligned_cols=191 Identities=14% Similarity=0.132 Sum_probs=136.3
Q ss_pred CceeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-ccc
Q 004972 304 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 382 (721)
Q Consensus 304 ~~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l 382 (721)
+|+||+|||+|.||.++|..|+++|++|++||+++++++...+ . .+..+++. +.+
T Consensus 2 ~m~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~-----------~-------------g~~~~~~~~~~~ 57 (302)
T 2h78_A 2 HMKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVA-----------A-------------GASAARSARDAV 57 (302)
T ss_dssp -CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHH-----------T-------------TCEECSSHHHHH
T ss_pred CCCEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHH-----------C-------------CCeEcCCHHHHH
Confidence 3679999999999999999999999999999999998776431 1 23445555 567
Q ss_pred CCCCEEEEcccCChHHHHHHHH---HHHhhCCCCeEEEecCCCCCHH--HHhcccC-CCCcEEEecCCCCCC----CCCe
Q 004972 383 KDVDMVIEAVIESVPLKQKIFS---ELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFFSPAH----VMPL 452 (721)
Q Consensus 383 ~~aDlVIeavpe~~~~k~~v~~---~l~~~~~~~~ii~s~ts~~~i~--~l~~~~~-~~~r~ig~h~~~p~~----~~~l 452 (721)
++||+||+|||++..++ .++. ++.+.++++++|++.++..+.. ++.+.+. ...+|+. +|+.+.. ...+
T Consensus 58 ~~aDvvi~~vp~~~~~~-~v~~~~~~~~~~l~~~~~vi~~st~~~~~~~~l~~~~~~~g~~~~~-~pv~~~~~~~~~g~l 135 (302)
T 2h78_A 58 QGADVVISMLPASQHVE-GLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAMLD-APVSGGTAGAAAGTL 135 (302)
T ss_dssp TTCSEEEECCSCHHHHH-HHHHSSSCGGGSSCSSCEEEECSCCCHHHHHHHHHHHHHTTCCEEE-CCEESCHHHHHHTCE
T ss_pred hCCCeEEEECCCHHHHH-HHHcCchhHHhcCCCCcEEEECCCCCHHHHHHHHHHHHHcCCEEEE-EEccCChhhHhcCCc
Confidence 89999999999665554 4454 6777888888887655443332 3444443 2334555 2332221 1223
Q ss_pred eEEecCCCCCHHHHHHHHHHHHHcCCeeEEEcC-CCch---hhhhhhhH----HHHHHHHHHHc-CCCHHHHHHHH-Hhc
Q 004972 453 LEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN-CTGF---AVNRAFFP----YSQSARLLVSL-GVDVFRIDSAI-RSF 522 (721)
Q Consensus 453 vEiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d-~~gf---i~nRl~~~----~~~Ea~~l~~~-Gv~~~~ID~a~-~~~ 522 (721)
+.++.+ +++.++.+.++++.+|+.++++++ ..+. ++|+++.+ +++|++.+++. |+++++++.++ .+.
T Consensus 136 ~~~~~g---~~~~~~~~~~ll~~~g~~~~~~~~~~~~~~~Kl~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~ 212 (302)
T 2h78_A 136 TFMVGG---DAEALEKARPLFEAMGRNIFHAGPDGAGQVAKVCNNQLLAVLMIGTAEAMALGVANGLEAKVLAEIMRRSS 212 (302)
T ss_dssp EEEEES---CHHHHHHHHHHHHHHEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTST
T ss_pred eEEeCC---CHHHHHHHHHHHHHhCCCeEEcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHcCC
Confidence 444444 799999999999999999999976 2233 35666544 68899999987 89999999998 544
Q ss_pred C
Q 004972 523 G 523 (721)
Q Consensus 523 G 523 (721)
+
T Consensus 213 ~ 213 (302)
T 2h78_A 213 G 213 (302)
T ss_dssp T
T ss_pred C
Confidence 3
No 99
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=99.67 E-value=8.4e-17 Score=170.03 Aligned_cols=191 Identities=11% Similarity=0.079 Sum_probs=135.6
Q ss_pred CCceeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cc
Q 004972 303 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SE 381 (721)
Q Consensus 303 ~~~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~ 381 (721)
..|+||+|||+|.||.++|..|+++|++|++||+++++++.+.+ . .+..++++ +.
T Consensus 19 ~~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~-----------~-------------g~~~~~~~~~~ 74 (310)
T 3doj_A 19 SHMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVE-----------H-------------GASVCESPAEV 74 (310)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHH-----------T-------------TCEECSSHHHH
T ss_pred ccCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-----------C-------------CCeEcCCHHHH
Confidence 45789999999999999999999999999999999998776421 1 23445555 56
Q ss_pred cCCCCEEEEcccCChHHHHHHH--HHHHhhCCCCeEEEecCCCCCHH--HHhcccC-CCCcEEEecCCCCC----CCCCe
Q 004972 382 FKDVDMVIEAVIESVPLKQKIF--SELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFFSPA----HVMPL 452 (721)
Q Consensus 382 l~~aDlVIeavpe~~~~k~~v~--~~l~~~~~~~~ii~s~ts~~~i~--~l~~~~~-~~~r~ig~h~~~p~----~~~~l 452 (721)
+++||+||+|||++..++..++ .++.+.++++++|++.++..+.. .+.+.+. ....|+. ||.... ..+.+
T Consensus 75 ~~~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~~v~-~pv~g~~~~a~~g~l 153 (310)
T 3doj_A 75 IKKCKYTIAMLSDPCAALSVVFDKGGVLEQICEGKGYIDMSTVDAETSLKINEAITGKGGRFVE-GPVSGSKKPAEDGQL 153 (310)
T ss_dssp HHHCSEEEECCSSHHHHHHHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE-CCEECCHHHHHHTCE
T ss_pred HHhCCEEEEEcCCHHHHHHHHhCchhhhhccCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEe-CCCCCChhHHhcCCe
Confidence 7899999999996655554433 66778888998887655433322 3333332 2233444 332111 12234
Q ss_pred eEEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCc------hhhhhhh---hHHHHHHHHHHHc-CCCHHHHHHHH-Hh
Q 004972 453 LEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG------FAVNRAF---FPYSQSARLLVSL-GVDVFRIDSAI-RS 521 (721)
Q Consensus 453 vEiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~~g------fi~nRl~---~~~~~Ea~~l~~~-Gv~~~~ID~a~-~~ 521 (721)
..++.+ ++++++.+.++++.+|+.++++++ +| ++.|.++ ...++|++.+++. |++++++..++ .+
T Consensus 154 ~i~~gg---~~~~~~~~~~ll~~~g~~~~~~g~-~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~d~~~~~~~~~~~ 229 (310)
T 3doj_A 154 IILAAG---DKALFEESIPAFDVLGKRSFYLGQ-VGNGAKMKLIVNMIMGSMMNAFSEGLVLADKSGLSSDTLLDILDLG 229 (310)
T ss_dssp EEEEEE---CHHHHHHHHHHHHHHEEEEEECSS-TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHS
T ss_pred EEEEcC---CHHHHHHHHHHHHHhCCCEEEeCC-cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhc
Confidence 445555 589999999999999999999987 55 5556554 3457899999987 99999999998 54
Q ss_pred c
Q 004972 522 F 522 (721)
Q Consensus 522 ~ 522 (721)
.
T Consensus 230 ~ 230 (310)
T 3doj_A 230 A 230 (310)
T ss_dssp T
T ss_pred c
Confidence 3
No 100
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=99.66 E-value=1e-16 Score=169.36 Aligned_cols=189 Identities=13% Similarity=0.067 Sum_probs=127.5
Q ss_pred CCCceeEEEEcCCCCcHHHHHHHHHCCC-ceEEEeCC--HHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccC
Q 004972 302 PRGVRKVAVIGGGLMGSGIATAHILNNI-YVVLKEVN--SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLD 378 (721)
Q Consensus 302 ~~~~~kI~VIG~G~mG~~iA~~la~~G~-~V~l~d~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~ 378 (721)
.+.++||+|||+|.||.+||..|+++|+ +|++||++ ++..+.+. +. .+..+++
T Consensus 21 ~~~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~-----------~~-------------g~~~~~~ 76 (312)
T 3qsg_A 21 QSNAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAASAESWRPRAE-----------EL-------------GVSCKAS 76 (312)
T ss_dssp ----CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHH-----------HT-------------TCEECSC
T ss_pred cCCCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHH-----------HC-------------CCEEeCC
Confidence 3456899999999999999999999999 99999997 45544431 11 2344555
Q ss_pred c-cccCCCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHH--HHhcccC-C--CCcEEEecCCCCC--CCC
Q 004972 379 Y-SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTS-S--QDRIIGAHFFSPA--HVM 450 (721)
Q Consensus 379 ~-~~l~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~--~l~~~~~-~--~~r~ig~h~~~p~--~~~ 450 (721)
. +.+++||+||+|||++... +++.++.+.++++++|++.+|..+.+ .+...+. . ..+|+....+.|+ ...
T Consensus 77 ~~e~~~~aDvVi~~vp~~~~~--~~~~~l~~~l~~~~ivvd~st~~~~~~~~~~~~~~~~~~g~~~vd~pv~g~~~~~~g 154 (312)
T 3qsg_A 77 VAEVAGECDVIFSLVTAQAAL--EVAQQAGPHLCEGALYADFTSCSPAVKRAIGDVISRHRPSAQYAAVAVMSAVKPHGH 154 (312)
T ss_dssp HHHHHHHCSEEEECSCTTTHH--HHHHHHGGGCCTTCEEEECCCCCHHHHHHHHHHHHHHCTTCEEEEEEECSCSTTTGG
T ss_pred HHHHHhcCCEEEEecCchhHH--HHHHhhHhhcCCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCeEEeccccCCchhhcC
Confidence 5 5678999999999966654 46788999999999998766654433 2222221 1 2234332112211 122
Q ss_pred CeeEEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCch-----hhhhhhh----HHHHHHHHHHHc-CCCHHHHHHHH-
Q 004972 451 PLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF-----AVNRAFF----PYSQSARLLVSL-GVDVFRIDSAI- 519 (721)
Q Consensus 451 ~lvEiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~~gf-----i~nRl~~----~~~~Ea~~l~~~-Gv~~~~ID~a~- 519 (721)
.+..++.++.+ +.++++++.+|+.++++++.+|. ++|..+. ..++|++.+.+. |++++-++ ++
T Consensus 155 ~l~i~vgg~~~-----~~~~~ll~~~g~~~~~~g~~~g~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~Gld~~~~~-~l~ 228 (312)
T 3qsg_A 155 RVPLVVDGDGA-----RRFQAAFTLYGCRIEVLDGEVGGAALLKMCRSAVLKGLEALFLEALAAAEKMGLADRVLA-SLD 228 (312)
T ss_dssp GSEEEEESTTH-----HHHHHHHHTTTCEEEECCSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHHHHHH-HHH
T ss_pred CEEEEecCChH-----HHHHHHHHHhCCCeEEcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHH
Confidence 55667777532 88999999999999999876662 4444443 567899998887 99985554 45
Q ss_pred Hhc
Q 004972 520 RSF 522 (721)
Q Consensus 520 ~~~ 522 (721)
.++
T Consensus 229 ~~~ 231 (312)
T 3qsg_A 229 ASF 231 (312)
T ss_dssp HHS
T ss_pred hcC
Confidence 443
No 101
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=99.65 E-value=3.9e-16 Score=163.78 Aligned_cols=184 Identities=19% Similarity=0.170 Sum_probs=132.1
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cccCC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 384 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 384 (721)
+||+|||+|.||.++|..|+++|++|++||+++++++.+.+ . .+..++++ +.++
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~-----------~-------------g~~~~~~~~~~~~- 70 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAE-----------A-------------GATLADSVADVAA- 70 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHH-----------T-------------TCEECSSHHHHTT-
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-----------C-------------CCEEcCCHHHHHh-
Confidence 58999999999999999999999999999999998776432 1 24556666 4466
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHH--HHhcccC-CCCcEEEecCCCCC---CCCCeeEEecC
Q 004972 385 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFFSPA---HVMPLLEIVRT 458 (721)
Q Consensus 385 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~--~l~~~~~-~~~r~ig~h~~~p~---~~~~lvEiv~~ 458 (721)
||+||+|||++..+ +.++.++.+.++++++|++.++..+.+ ++.+.+. ...+|+....+.++ ..+.+..++.+
T Consensus 71 aDvvi~~vp~~~~~-~~v~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~~~~pv~g~~~~a~~g~l~~~~gg 149 (296)
T 3qha_A 71 ADLIHITVLDDAQV-REVVGELAGHAKPGTVIAIHSTISDTTAVELARDLKARDIHIVDAPVSGGAAAAARGELATMVGA 149 (296)
T ss_dssp SSEEEECCSSHHHH-HHHHHHHHTTCCTTCEEEECSCCCHHHHHHHHHHHGGGTCEEEECCEESCHHHHHHTCEEEEEEC
T ss_pred CCEEEEECCChHHH-HHHHHHHHHhcCCCCEEEEeCCCCHHHHHHHHHHHHHcCCEEEeCCCcCCHHHHhcCCccEEecC
Confidence 99999999965554 456688988899999887655543322 3333332 22234432222211 12344555555
Q ss_pred CCCCHHHHHHHHHHHHHcCCeeEEEcCCCc------hhhhhhhh---HHHHHHHHHHHc-CCCHHHH------HHHH
Q 004972 459 ERTSAQVILDLMTVGKIIKKVPVVVGNCTG------FAVNRAFF---PYSQSARLLVSL-GVDVFRI------DSAI 519 (721)
Q Consensus 459 ~~t~~e~~~~~~~l~~~lG~~~v~v~d~~g------fi~nRl~~---~~~~Ea~~l~~~-Gv~~~~I------D~a~ 519 (721)
++++++.++++++.+|+.++++++ +| ++.|.+.. ..++|++.+++. |++++++ ..++
T Consensus 150 ---~~~~~~~~~~ll~~~g~~~~~~g~-~g~a~~~Kl~~N~~~~~~~~~~~E~~~l~~~~G~d~~~~~~~~~~~~~i 222 (296)
T 3qha_A 150 ---DREVYERIKPAFKHWAAVVIHAGE-PGAGTRMKLARNMLTFTSYAAACEAMKLAEAAGLDLQALGRVVRHTDAL 222 (296)
T ss_dssp ---CHHHHHHHHHHHHHHEEEEEEEES-TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred ---CHHHHHHHHHHHHHHcCCeEEcCC-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHhhhcchHHHH
Confidence 689999999999999999999976 45 45555543 347899999987 9999999 7777
No 102
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=99.64 E-value=1.5e-15 Score=159.84 Aligned_cols=191 Identities=13% Similarity=0.117 Sum_probs=133.6
Q ss_pred ceeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cccC
Q 004972 305 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 383 (721)
Q Consensus 305 ~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~ 383 (721)
.+||+|||+|.||.++|..|+++|++|++||+++++++...+ .| ....++++ +.++
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~-----------~g------------~~~~~~~~~e~~~ 63 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQACANLLA-----------EG------------ACGAAASAREFAG 63 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-----------TT------------CSEEESSSTTTTT
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH-----------cC------------CccccCCHHHHHh
Confidence 468999999999999999999999999999999998776432 12 12224444 6679
Q ss_pred CCCEEEEcccCChHHHHHHH--HHHHhhCCCCeEEEecCCCCCH--HHHhcccC-CCCcEEEecCCCC-C---CCCCeeE
Q 004972 384 DVDMVIEAVIESVPLKQKIF--SELEKACPPHCILATNTSTIDL--NIVGEKTS-SQDRIIGAHFFSP-A---HVMPLLE 454 (721)
Q Consensus 384 ~aDlVIeavpe~~~~k~~v~--~~l~~~~~~~~ii~s~ts~~~i--~~l~~~~~-~~~r~ig~h~~~p-~---~~~~lvE 454 (721)
+||+||+|||++..++..++ +++.+.++++++|++.++..+. ..+.+.+. ....|+. ||... + ....++.
T Consensus 64 ~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~~~-~pv~g~~~~a~~g~l~~ 142 (303)
T 3g0o_A 64 VVDALVILVVNAAQVRQVLFGEDGVAHLMKPGSAVMVSSTISSADAQEIAAALTALNLNMLD-APVSGGAVKAAQGEMTV 142 (303)
T ss_dssp TCSEEEECCSSHHHHHHHHC--CCCGGGSCTTCEEEECSCCCHHHHHHHHHHHHTTTCEEEE-CCEESCHHHHHTTCEEE
T ss_pred cCCEEEEECCCHHHHHHHHhChhhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCeEEe-CCCCCChhhhhcCCeEE
Confidence 99999999996555544433 6677888899988765543332 23333332 2234554 44221 1 1123344
Q ss_pred EecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCc------hhhhhhh---hHHHHHHHHHHHc-CCCHHHHHHHH-Hhc
Q 004972 455 IVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG------FAVNRAF---FPYSQSARLLVSL-GVDVFRIDSAI-RSF 522 (721)
Q Consensus 455 iv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~~g------fi~nRl~---~~~~~Ea~~l~~~-Gv~~~~ID~a~-~~~ 522 (721)
++.+ ++++++.++++++.+|+.++++++.+| ++.|-+. ...++|++.+++. |++++++..++ .+.
T Consensus 143 ~~gg---~~~~~~~~~~ll~~~g~~~~~~~~~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~d~~~~~~~~~~~~ 218 (303)
T 3g0o_A 143 MASG---SEAAFTRLKPVLDAVASNVYRISDTPGAGSTVKIIHQLLAGVHIAAAAEAMALAARAGIPLDVMYDVVTHAA 218 (303)
T ss_dssp EEEC---CHHHHHHHHHHHHHHEEEEEEEESSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHTTST
T ss_pred EeCC---CHHHHHHHHHHHHHHCCCEEECCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcc
Confidence 4444 689999999999999999999987555 2344442 3457899998877 99999999998 543
No 103
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=99.64 E-value=2.8e-16 Score=163.18 Aligned_cols=210 Identities=10% Similarity=-0.030 Sum_probs=140.3
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCce-EEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cccC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 383 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V-~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~ 383 (721)
+||+|||+|.||.+++..|+++ ++| .+||++++.++.+.+. .+. .++++ +.++
T Consensus 3 m~I~iIG~G~mG~~la~~l~~~-~~v~~v~~~~~~~~~~~~~~----------------------~g~--~~~~~~~~~~ 57 (276)
T 2i76_A 3 LVLNFVGTGTLTRFFLECLKDR-YEIGYILSRSIDRARNLAEV----------------------YGG--KAATLEKHPE 57 (276)
T ss_dssp -CCEEESCCHHHHHHHHTTC-----CCCEECSSHHHHHHHHHH----------------------TCC--CCCSSCCCCC
T ss_pred ceEEEEeCCHHHHHHHHHHHHc-CcEEEEEeCCHHHHHHHHHH----------------------cCC--ccCCHHHHHh
Confidence 5899999999999999999888 999 5999999887664221 111 34455 4578
Q ss_pred CCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhcccCCCCcEEEecC----CCCCC-CCCeeEEecC
Q 004972 384 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHF----FSPAH-VMPLLEIVRT 458 (721)
Q Consensus 384 ~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~~l~~~~~~~~r~ig~h~----~~p~~-~~~lvEiv~~ 458 (721)
+||+||+|+|++. ..+++.++. .++++|++.+++.+.+.+... .+.+.|+ .+++. .....++...
T Consensus 58 ~~DvVilav~~~~--~~~v~~~l~---~~~~ivi~~s~~~~~~~l~~~-----~~~~~~p~~~~~g~~~~~~~~~~~~~~ 127 (276)
T 2i76_A 58 LNGVVFVIVPDRY--IKTVANHLN---LGDAVLVHCSGFLSSEIFKKS-----GRASIHPNFSFSSLEKALEMKDQIVFG 127 (276)
T ss_dssp ---CEEECSCTTT--HHHHHTTTC---CSSCCEEECCSSSCGGGGCSS-----SEEEEEECSCC--CTTGGGCGGGCCEE
T ss_pred cCCEEEEeCChHH--HHHHHHHhc---cCCCEEEECCCCCcHHHHHHh-----hccccchhhhcCCCchhHHHhCCCeEE
Confidence 9999999999554 567776664 577888776656677655433 4566774 34232 1112222222
Q ss_pred CCCCHHHHHHHHHHHHHcCCeeEEEcCC--C------chhhhhhhhHHHHHHHHHHHc-CCCHH----------HHHHHH
Q 004972 459 ERTSAQVILDLMTVGKIIKKVPVVVGNC--T------GFAVNRAFFPYSQSARLLVSL-GVDVF----------RIDSAI 519 (721)
Q Consensus 459 ~~t~~e~~~~~~~l~~~lG~~~v~v~d~--~------gfi~nRl~~~~~~Ea~~l~~~-Gv~~~----------~ID~a~ 519 (721)
..++++.++.++++++.+|+.++++++. + ++..| .+..++.|+..+++. |++.+ .++.++
T Consensus 128 ~~~~~~~~~~~~~l~~~lG~~~~~v~~~~~~~~~~~~~l~~n-~~~~~~~~a~~~~~~~Gl~~~~a~~~~l~~~~~~~~~ 206 (276)
T 2i76_A 128 LEGDERGLPIVKKIAEEISGKYFVIPSEKKKAYHLAAVIASN-FPVALAYLSKRIYTLLGLDEPELLIHTLMKGVADNIK 206 (276)
T ss_dssp ECCCTTTHHHHHHHHHHHCSCEEECCGGGHHHHHHHHHHHHT-THHHHHHHHHHHHHTTTCSCHHHHHHHHHHHHHHHHH
T ss_pred EEeChHHHHHHHHHHHHhCCCEEEECHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHH
Confidence 2235667999999999999999998742 1 34444 666677888888874 99554 566666
Q ss_pred -Hh-cCCCccHHHHHHhhchHHHHHHHHHHHHhC
Q 004972 520 -RS-FGLPIGPFQLLDLAGYGVAAATSKEFDKAF 551 (721)
Q Consensus 520 -~~-~G~p~Gpf~~~D~~Gld~~~~~~~~l~~~~ 551 (721)
.+ .+.++||++..|..+++...+.++.+++++
T Consensus 207 ~~gp~~~~tgP~~r~D~~t~~~~l~~l~~~~~~~ 240 (276)
T 2i76_A 207 KMRVECSLTGPVKRGDWQVVEEERREYEKIFGNT 240 (276)
T ss_dssp HSCGGGGCCSHHHHTCHHHHHHHHHHHHHHHSCC
T ss_pred hcChHhhCCCCcccCCHHHHHHHHHHHhccCccH
Confidence 33 556789999999999999999998875544
No 104
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=99.64 E-value=3e-16 Score=163.98 Aligned_cols=188 Identities=13% Similarity=0.058 Sum_probs=133.2
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cccCC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 384 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 384 (721)
+||+|||+|.||.++|..|+++|++|++||+++++++...+ . .+..++++ +.+++
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~-----------~-------------g~~~~~~~~~~~~~ 57 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAA-----------L-------------GAERAATPCEVVES 57 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHH-----------T-------------TCEECSSHHHHHHH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH-----------C-------------CCeecCCHHHHHhc
Confidence 58999999999999999999999999999999998776432 1 24455565 55788
Q ss_pred CCEEEEcccCChHHHHHHH--HHHHhhCCCCeEEEecCCCCCHH--HHhcccC-CCCcEEEecCCCCC----CCCCeeEE
Q 004972 385 VDMVIEAVIESVPLKQKIF--SELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFFSPA----HVMPLLEI 455 (721)
Q Consensus 385 aDlVIeavpe~~~~k~~v~--~~l~~~~~~~~ii~s~ts~~~i~--~l~~~~~-~~~r~ig~h~~~p~----~~~~lvEi 455 (721)
||+||+|||++..++..++ .++.+.++++++|++.++..+.+ .+.+.+. ....|+. ||..+. ....++.+
T Consensus 58 aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~~~-~pv~g~~~~a~~g~l~~~ 136 (287)
T 3pef_A 58 CPVTFAMLADPAAAEEVCFGKHGVLEGIGEGRGYVDMSTVDPATSQRIGVAVVAKGGRFLE-APVSGSKKPAEDGTLIIL 136 (287)
T ss_dssp CSEEEECCSSHHHHHHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE-CCEECCHHHHHHTCEEEE
T ss_pred CCEEEEEcCCHHHHHHHHcCcchHhhcCCCCCEEEeCCCCCHHHHHHHHHHHHHhCCEEEE-CCCcCCHHHHhcCCEEEE
Confidence 9999999996656554443 77888899999887654433322 3333332 2234554 443221 11234445
Q ss_pred ecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCc--h---hhhhhhh----HHHHHHHHHHHc-CCCHHHHHHHH-Hhc
Q 004972 456 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG--F---AVNRAFF----PYSQSARLLVSL-GVDVFRIDSAI-RSF 522 (721)
Q Consensus 456 v~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~~g--f---i~nRl~~----~~~~Ea~~l~~~-Gv~~~~ID~a~-~~~ 522 (721)
+.+ ++++++.++++++.+|++++++++ +| . ++|+++. ..++|++.+++. |++++++..++ .+.
T Consensus 137 ~gg---~~~~~~~~~~ll~~~g~~~~~~g~-~g~~~~~Kl~~N~~~~~~~~~~~E~~~l~~~~G~d~~~~~~~~~~~~ 210 (287)
T 3pef_A 137 AAG---DRNLYDEAMPGFEKMGKKIIHLGD-VGKGAEMKLVVNMVMGGMMACFCEGLALGEKAGLATDAILDVIGAGA 210 (287)
T ss_dssp EEE---CHHHHHHHHHHHHHHEEEEEECSS-TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHST
T ss_pred EeC---CHHHHHHHHHHHHHhCCCeEEeCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcc
Confidence 554 689999999999999999999976 44 1 3344432 367899999987 99999999998 544
No 105
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=99.64 E-value=2.6e-16 Score=164.72 Aligned_cols=186 Identities=13% Similarity=0.079 Sum_probs=127.5
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cccCC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 384 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 384 (721)
+||||||+|.||.+||.+|+++||+|++||+++++++.. .+.| ....+++ +.+++
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l-----------~~~G-------------~~~~~s~~e~~~~ 61 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYELVVWNRTASKAEPL-----------TKLG-------------ATVVENAIDAITP 61 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEC-------CTT-----------TTTT-------------CEECSSGGGGCCT
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-----------HHcC-------------CeEeCCHHHHHhc
Confidence 489999999999999999999999999999999886542 2222 3334455 77899
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHH---HHhcccCCCCcEEEecCCCCCCCC--------Cee
Q 004972 385 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN---IVGEKTSSQDRIIGAHFFSPAHVM--------PLL 453 (721)
Q Consensus 385 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~---~l~~~~~~~~r~ig~h~~~p~~~~--------~lv 453 (721)
||+||.|+|.+......+...+.+.+++++++++.++ ..+. ++++.+... |.+|.+.|-.+ .+.
T Consensus 62 ~dvvi~~l~~~~~~~~v~~~~~~~~~~~~~iiid~sT-~~p~~~~~~~~~~~~~----g~~~ldapVsGg~~~a~~g~l~ 136 (297)
T 4gbj_A 62 GGIVFSVLADDAAVEELFSMELVEKLGKDGVHVSMST-ISPETSRQLAQVHEWY----GAHYVGAPIFARPEAVRAKVGN 136 (297)
T ss_dssp TCEEEECCSSHHHHHHHSCHHHHHHHCTTCEEEECSC-CCHHHHHHHHHHHHHT----TCEEEECCEECCHHHHHHTCCE
T ss_pred CCceeeeccchhhHHHHHHHHHHhhcCCCeEEEECCC-CChHHHHHHHHHHHhc----CCceecCCcCCCccccccccce
Confidence 9999999997777666666778888889988876444 3333 333333211 34554333221 222
Q ss_pred EEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCc-----hhhhhhhh----HHHHHHHHHHHc-CCCHHHHHHHH-Hhc
Q 004972 454 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG-----FAVNRAFF----PYSQSARLLVSL-GVDVFRIDSAI-RSF 522 (721)
Q Consensus 454 Eiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~~g-----fi~nRl~~----~~~~Ea~~l~~~-Gv~~~~ID~a~-~~~ 522 (721)
-++.+ +++++++++++++.+|+.++++++.+| -++|.++. ..+.|++.+.+. |++++++-.++ .+.
T Consensus 137 im~gG---~~~~~~~~~~~l~~~g~~i~~~g~~~G~g~~~Kl~~N~~~~~~~~~~aEa~~la~~~Gld~~~~~~~l~~~~ 213 (297)
T 4gbj_A 137 ICLSG---NAGAKERIKPIVENFVKGVFDFGDDPGAANVIKLAGNFMIACSLEMMGEAFTMAEKNGISRQSIYEMLTSTL 213 (297)
T ss_dssp EEEEE---CHHHHHHHHHHHHTTCSEEEECCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTTT
T ss_pred eeccc---chhHHHHHHHHHHHhhCCeEEecCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhc
Confidence 23333 789999999999999999999987665 24455532 235699999987 99999998888 444
Q ss_pred C
Q 004972 523 G 523 (721)
Q Consensus 523 G 523 (721)
+
T Consensus 214 ~ 214 (297)
T 4gbj_A 214 F 214 (297)
T ss_dssp T
T ss_pred c
Confidence 3
No 106
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=99.64 E-value=2.6e-16 Score=164.49 Aligned_cols=190 Identities=13% Similarity=0.097 Sum_probs=131.2
Q ss_pred ceeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cccC
Q 004972 305 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 383 (721)
Q Consensus 305 ~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~ 383 (721)
|+||+|||+|.||.++|..|+++|++|++||+++++++...+ . .+..+++. +.++
T Consensus 1 M~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~-----------~-------------g~~~~~~~~~~~~ 56 (287)
T 3pdu_A 1 MTTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVA-----------L-------------GARQASSPAEVCA 56 (287)
T ss_dssp CCCEEEECCSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHH-----------H-------------TCEECSCHHHHHH
T ss_pred CCeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH-----------C-------------CCeecCCHHHHHH
Confidence 468999999999999999999999999999999998776432 1 23445555 5578
Q ss_pred CCCEEEEcccCChHHHHHHH--HHHHhhCCCCeEEEecCCCCCHH--HHhcccC-CCCcEEEecCCCCCC---CCCeeEE
Q 004972 384 DVDMVIEAVIESVPLKQKIF--SELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFFSPAH---VMPLLEI 455 (721)
Q Consensus 384 ~aDlVIeavpe~~~~k~~v~--~~l~~~~~~~~ii~s~ts~~~i~--~l~~~~~-~~~r~ig~h~~~p~~---~~~lvEi 455 (721)
+||+||+|||++..++..++ +++.+.++++++|++.++..+.. .+.+.+. ...+|+....+.++. ...+..+
T Consensus 57 ~advvi~~v~~~~~~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~~~~~pv~g~~~~a~~g~l~~~ 136 (287)
T 3pdu_A 57 ACDITIAMLADPAAAREVCFGANGVLEGIGGGRGYIDMSTVDDETSTAIGAAVTARGGRFLEAPVSGTKKPAEDGTLIIL 136 (287)
T ss_dssp HCSEEEECCSSHHHHHHHHHSTTCGGGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEECCHHHHHHTCEEEE
T ss_pred cCCEEEEEcCCHHHHHHHHcCchhhhhcccCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEECCccCCHHHHhcCCEEEE
Confidence 99999999996655544443 66778888888887655433322 3333332 222343322221110 1122333
Q ss_pred ecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCc------hhhhhhh---hHHHHHHHHHHHc-CCCHHHHHHHH-Hhc
Q 004972 456 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG------FAVNRAF---FPYSQSARLLVSL-GVDVFRIDSAI-RSF 522 (721)
Q Consensus 456 v~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~~g------fi~nRl~---~~~~~Ea~~l~~~-Gv~~~~ID~a~-~~~ 522 (721)
+.+ ++++++.++++++.+|++++++++ +| ++.|.+. ...++|++.+++. |++++++..++ .+.
T Consensus 137 ~gg---~~~~~~~~~~ll~~~g~~~~~~g~-~g~~~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~ 210 (287)
T 3pdu_A 137 AAG---DQSLFTDAGPAFAALGKKCLHLGE-VGQGARMKLVVNMIMGQMMTALGEGMALGRNCGLDGGQLLEVLDAGA 210 (287)
T ss_dssp EEE---CHHHHHHTHHHHHHHEEEEEECSS-TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHST
T ss_pred EeC---CHHHHHHHHHHHHHhCCCEEEcCC-CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcc
Confidence 333 689999999999999999999986 44 3445543 3456899998877 99999999998 544
No 107
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=99.63 E-value=1.2e-15 Score=161.73 Aligned_cols=190 Identities=14% Similarity=0.102 Sum_probs=131.7
Q ss_pred CceeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-ccc
Q 004972 304 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 382 (721)
Q Consensus 304 ~~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l 382 (721)
.++||+|||+|.||.++|..|+++|++|++||+++++++...+ . .+..++++ +.+
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~-----------~-------------g~~~~~~~~e~~ 85 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPARAASLAA-----------L-------------GATIHEQARAAA 85 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHT-----------T-------------TCEEESSHHHHH
T ss_pred CCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHH-----------C-------------CCEeeCCHHHHH
Confidence 3569999999999999999999999999999999998776421 1 24455666 567
Q ss_pred CCCCEEEEcccCChHHHHHHHH--HHHhhCCCCeEEEecCCCCCHH--HHhcccC-CCCcEEEecCCCCC---CCCCeeE
Q 004972 383 KDVDMVIEAVIESVPLKQKIFS--ELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFFSPA---HVMPLLE 454 (721)
Q Consensus 383 ~~aDlVIeavpe~~~~k~~v~~--~l~~~~~~~~ii~s~ts~~~i~--~l~~~~~-~~~r~ig~h~~~p~---~~~~lvE 454 (721)
++||+||+|||++..++ .++. ++.+.++++++|++.+++.+.. .+.+.+. ...+|+....+.++ ..+.+..
T Consensus 86 ~~aDvVi~~vp~~~~~~-~v~~~~~~~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~~~~pv~g~~~~a~~g~l~i 164 (320)
T 4dll_A 86 RDADIVVSMLENGAVVQ-DVLFAQGVAAAMKPGSLFLDMASITPREARDHAARLGALGIAHLDTPVSGGTVGAEQGTLVI 164 (320)
T ss_dssp TTCSEEEECCSSHHHHH-HHHTTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEECHHHHHHHTCEEE
T ss_pred hcCCEEEEECCCHHHHH-HHHcchhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCEEEeCCCcCCHhHHhcCCeeE
Confidence 89999999999655554 4444 6777788888887655443322 3333332 22234332111111 1223444
Q ss_pred EecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCc------hhhhhhh---hHHHHHHHHHHHc-CCCHHHHHHHH-HhcC
Q 004972 455 IVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG------FAVNRAF---FPYSQSARLLVSL-GVDVFRIDSAI-RSFG 523 (721)
Q Consensus 455 iv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~~g------fi~nRl~---~~~~~Ea~~l~~~-Gv~~~~ID~a~-~~~G 523 (721)
++.+ ++++++.++++++.+ +.++++++ +| ++.|-+. ...++|++.+++. |++++++..++ .+.+
T Consensus 165 ~~gg---~~~~~~~~~~ll~~~-~~~~~~g~-~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~d~~~~~~~~~~~~~ 239 (320)
T 4dll_A 165 MAGG---KPADFERSLPLLKVF-GRATHVGP-HGSGQLTKLANQMIVGITIGAVAEALLFATKGGADMAKVKEAITGGFA 239 (320)
T ss_dssp EEES---CHHHHHHHHHHHHHH-EEEEEEES-TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHTTSTT
T ss_pred EeCC---CHHHHHHHHHHHHhc-CCEEEeCC-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHcccc
Confidence 5554 689999999999999 88999976 34 3344433 3357899999987 99999999998 5443
No 108
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=99.61 E-value=1e-15 Score=152.39 Aligned_cols=159 Identities=9% Similarity=0.014 Sum_probs=125.3
Q ss_pred CceeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCccccC
Q 004972 304 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 383 (721)
Q Consensus 304 ~~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~ 383 (721)
..+||+|||+|.||+++|..|.++|++|++||+. +.++
T Consensus 5 ~~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~------------------------------------------~~~~ 42 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP------------------------------------------EDIR 42 (232)
T ss_dssp CCCEEEEECCSCCCSCHHHHHHHTTCEEEECSSG------------------------------------------GGGG
T ss_pred CCcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH------------------------------------------HHhc
Confidence 3468999999999999999999999999999982 1146
Q ss_pred CCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhcccCCCCcEEEecCCCCCCCCCeeEEecCCCCCH
Q 004972 384 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSA 463 (721)
Q Consensus 384 ~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~~l~~~~~~~~r~ig~h~~~p~~~~~lvEiv~~~~t~~ 463 (721)
+|| |+|||.+ ...++++++.+.+++++++++.+++.+...+........+|++.||.... ..++... ++
T Consensus 43 ~aD--ilavP~~--ai~~vl~~l~~~l~~g~ivvd~sgs~~~~vl~~~~~~g~~fvg~HPm~g~-----~~~i~a~--d~ 111 (232)
T 3dfu_A 43 DFE--LVVIDAH--GVEGYVEKLSAFARRGQMFLHTSLTHGITVMDPLETSGGIVMSAHPIGQD-----RWVASAL--DE 111 (232)
T ss_dssp GCS--EEEECSS--CHHHHHHHHHTTCCTTCEEEECCSSCCGGGGHHHHHTTCEEEEEEEEETT-----EEEEEES--SH
T ss_pred cCC--EEEEcHH--HHHHHHHHHHHhcCCCCEEEEECCcCHHHHHHHHHhCCCcEEEeeeCCCC-----ceeeeCC--CH
Confidence 788 8899954 66788899999999999998766555555444444556789999986432 2233322 78
Q ss_pred HHHHHHHHHHHHcCCeeEEEc--CCCch----hhhhhhhHHHHHHHHHH---HcCC-CHHHH
Q 004972 464 QVILDLMTVGKIIKKVPVVVG--NCTGF----AVNRAFFPYSQSARLLV---SLGV-DVFRI 515 (721)
Q Consensus 464 e~~~~~~~l~~~lG~~~v~v~--d~~gf----i~nRl~~~~~~Ea~~l~---~~Gv-~~~~I 515 (721)
+.++.++++++.+|++++.+. +.++| ..++.+.++.++|.+++ ++|+ +++|+
T Consensus 112 ~a~~~l~~L~~~lG~~vv~~~~~~hd~~~AAvsh~nhLv~L~~~A~~ll~~~~~g~a~~~d~ 173 (232)
T 3dfu_A 112 LGETIVGLLVGELGGSIVEIADDKRAQLAAALTYAGFLSTLQRDASYFLDEFLGDPDVTSDI 173 (232)
T ss_dssp HHHHHHHHHHHHTTCEECCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
T ss_pred HHHHHHHHHHHHhCCEEEEeCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhhh
Confidence 899999999999999999994 46666 55777888999999999 8898 88883
No 109
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=99.60 E-value=7.3e-15 Score=153.36 Aligned_cols=188 Identities=13% Similarity=0.027 Sum_probs=135.8
Q ss_pred ceeEEEEcC-CCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCccccC
Q 004972 305 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 383 (721)
Q Consensus 305 ~~kI~VIG~-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~ 383 (721)
|+||+|||+ |.||+++|..|++.|++|++||++++.++.+.+ .| +..++..+.++
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~-----------~g-------------~~~~~~~~~~~ 66 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQG-----------MG-------------IPLTDGDGWID 66 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHH-----------TT-------------CCCCCSSGGGG
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHh-----------cC-------------CCcCCHHHHhc
Confidence 569999999 999999999999999999999999988765421 12 22233336678
Q ss_pred CCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhcccCCCCcEEEecCCCCCC--------CCCe---
Q 004972 384 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAH--------VMPL--- 452 (721)
Q Consensus 384 ~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~~l~~~~~~~~r~ig~h~~~p~~--------~~~l--- 452 (721)
+||+||+|+| .....++++++.+.++++++|++.+++.++..+.+ .....++++.||+.|.. ....
T Consensus 67 ~aDvVi~av~--~~~~~~v~~~l~~~l~~~~ivv~~s~~~~~~~l~~-~~~~~~~v~~~P~~~~~~~~~~~~~~~~g~l~ 143 (286)
T 3c24_A 67 EADVVVLALP--DNIIEKVAEDIVPRVRPGTIVLILDAAAPYAGVMP-ERADITYFIGHPCHPPLFNDETDPAARTDYHG 143 (286)
T ss_dssp TCSEEEECSC--HHHHHHHHHHHGGGSCTTCEEEESCSHHHHHTCSC-CCTTSEEEEEEECCSCSSCCCCSHHHHTCSSS
T ss_pred CCCEEEEcCC--chHHHHHHHHHHHhCCCCCEEEECCCCchhHHHHh-hhCCCeEEecCCCCccccccccchhhccCccc
Confidence 9999999999 45578899999999999999998777676666654 33345899999998766 2232
Q ss_pred -----eEEecCCCCCHHHHHHHHHHHHHcCC---eeEEEcCC-Cch----hhhhhhhHH---HHHHHHH-HHc-CCCHHH
Q 004972 453 -----LEIVRTERTSAQVILDLMTVGKIIKK---VPVVVGNC-TGF----AVNRAFFPY---SQSARLL-VSL-GVDVFR 514 (721)
Q Consensus 453 -----vEiv~~~~t~~e~~~~~~~l~~~lG~---~~v~v~d~-~gf----i~nRl~~~~---~~Ea~~l-~~~-Gv~~~~ 514 (721)
..++.+..++++.++.+.++++.+|+ .++++++. .+. +.|-...++ +.|++.. ... |+++++
T Consensus 144 ~~~~~~~i~~~~~~~~~~~~~v~~l~~~~G~~~~~~~~v~~~~~~~~~~a~~n~~~~~~~~~~~eal~~~~~~~Gl~~~~ 223 (286)
T 3c24_A 144 GIAKQAIVCALMQGPEEHYAIGADICETMWSPVTRTHRVTTEQLAILEPGLSEMVAMPFVETMVHAVDECADRYGIDRQA 223 (286)
T ss_dssp SSSCEEEEEEEEESCTHHHHHHHHHHHHHTCSEEEEEECCHHHHHHHTTHHHHTTHHHHHHHHHHHHHHHHHHHCCCHHH
T ss_pred ccccceeeeeccCCCHHHHHHHHHHHHHhcCCcceEEEeChhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 23333344688999999999999999 88888642 222 234443333 2354433 333 898887
Q ss_pred HHHHH
Q 004972 515 IDSAI 519 (721)
Q Consensus 515 ID~a~ 519 (721)
+-.++
T Consensus 224 ~~~~~ 228 (286)
T 3c24_A 224 ALDFM 228 (286)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77665
No 110
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=99.60 E-value=2.7e-15 Score=167.05 Aligned_cols=204 Identities=13% Similarity=0.081 Sum_probs=145.0
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHH--HhhcCceeccCc-ccc
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN--NALKMLKGVLDY-SEF 382 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~i~~~~~~-~~l 382 (721)
+||+|||+|.||.++|..|+++|++|++||+++++++.+.+.... ....+ + .+... ...+++.+++++ +.+
T Consensus 9 ~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~~~v~~l~~~~~~----i~e~g-l-~~~l~~~~~~~~l~~ttd~~~a~ 82 (478)
T 2y0c_A 9 MNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQAKIDILNNGGVP----IHEPG-L-KEVIARNRSAGRLRFSTDIEAAV 82 (478)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCS----SCCTT-H-HHHHHHHHHTTCEEEECCHHHHH
T ss_pred ceEEEECcCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHCCCCC----cCCCC-H-HHHHHHhcccCCEEEECCHHHHh
Confidence 589999999999999999999999999999999998875431000 00000 0 00011 012468888888 568
Q ss_pred CCCCEEEEcccC--------ChHHHHHHHHHHHhhCCCCeEEEecCCCCCHH---HHhcccC----CC---CcEEEecCC
Q 004972 383 KDVDMVIEAVIE--------SVPLKQKIFSELEKACPPHCILATNTSTIDLN---IVGEKTS----SQ---DRIIGAHFF 444 (721)
Q Consensus 383 ~~aDlVIeavpe--------~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~---~l~~~~~----~~---~r~ig~h~~ 444 (721)
++||+||+|||+ |+....++++++.++++++++|++ .|++++. .+...+. .+ ..+ .+.+
T Consensus 83 ~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~-~STv~~gt~~~l~~~l~~~~~~g~~~~~~--~v~~ 159 (478)
T 2y0c_A 83 AHGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVD-KSTVPVGTAERVRAAVAEELAKRGGDQMF--SVVS 159 (478)
T ss_dssp HHCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEE-CSCCCTTHHHHHHHHHHHHHHHTTCCCCE--EEEE
T ss_pred hcCCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEE-eCCcCCCchHHHHHHHHHHhcCCCCCccE--EEEE
Confidence 999999999997 458899999999999999998864 4566542 2222211 11 222 2456
Q ss_pred CCCCCCCee---------EEecCCCCCH----HHHHHHHHHHHHcCC--eeEEEcC-----CCchhhhhhh---hHHHHH
Q 004972 445 SPAHVMPLL---------EIVRTERTSA----QVILDLMTVGKIIKK--VPVVVGN-----CTGFAVNRAF---FPYSQS 501 (721)
Q Consensus 445 ~p~~~~~lv---------Eiv~~~~t~~----e~~~~~~~l~~~lG~--~~v~v~d-----~~gfi~nRl~---~~~~~E 501 (721)
+|....+.. .++.|.. ++ +..+.+.++++.+++ .++++.+ ..+++.|.+. .+++||
T Consensus 160 ~Pe~~~eG~~~~~~~~p~~iviG~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~di~~ae~~Kl~~N~~~a~~ia~~nE 238 (478)
T 2y0c_A 160 NPEFLKEGAAVDDFTRPDRIVIGCD-DDVPGERARELMKKLYAPFNRNHERTLYMDVRSAEFTKYAANAMLATRISFMNE 238 (478)
T ss_dssp CCCCCCTTCHHHHHHSCSCEEEECC-SSHHHHHHHHHHHHHTGGGGSSSCCEEEECHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChhhhcccceeeccCCCCEEEEEEC-CCcccHHHHHHHHHHHHHHhccCCeEEcCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 776665554 3555543 34 789999999998875 5777764 4567888875 667899
Q ss_pred HHHHHHc-CCCHHHHHHHH
Q 004972 502 ARLLVSL-GVDVFRIDSAI 519 (721)
Q Consensus 502 a~~l~~~-Gv~~~~ID~a~ 519 (721)
+..+++. |++++++..++
T Consensus 239 ~~~la~~~Gid~~~v~~~i 257 (478)
T 2y0c_A 239 LANLADRFGADIEAVRRGI 257 (478)
T ss_dssp HHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHH
Confidence 9999988 99999999888
No 111
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=99.59 E-value=1e-14 Score=154.83 Aligned_cols=189 Identities=13% Similarity=0.068 Sum_probs=137.1
Q ss_pred CceeEEEEcCCCCcHHHHHHHHHCC----CceEEEeCCHH--HHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceecc
Q 004972 304 GVRKVAVIGGGLMGSGIATAHILNN----IYVVLKEVNSE--YLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL 377 (721)
Q Consensus 304 ~~~kI~VIG~G~mG~~iA~~la~~G----~~V~l~d~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~ 377 (721)
.++||+|||+|.||++||..|+++| ++|++||++++ +++.+. +.| +..++
T Consensus 21 ~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~~~~~~~l~-----------~~G-------------~~~~~ 76 (322)
T 2izz_A 21 QSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALR-----------KMG-------------VKLTP 76 (322)
T ss_dssp -CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCTTSHHHHHHH-----------HHT-------------CEEES
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCccHHHHHHHH-----------HcC-------------CEEeC
Confidence 3458999999999999999999999 89999999986 555432 111 33344
Q ss_pred Cc-cccCCCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhcccCC---CCcEEEecCCCCCCCCCee
Q 004972 378 DY-SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSS---QDRIIGAHFFSPAHVMPLL 453 (721)
Q Consensus 378 ~~-~~l~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~~l~~~~~~---~~r~ig~h~~~p~~~~~lv 453 (721)
+. +.+++||+||+||| .....+++.++.+.++++++|++.++++++..+.+.+.. ..++++.|+..|.......
T Consensus 77 ~~~e~~~~aDvVilav~--~~~~~~vl~~l~~~l~~~~ivvs~s~gi~~~~l~~~l~~~~~~~~vv~~~p~~p~~~~~g~ 154 (322)
T 2izz_A 77 HNKETVQHSDVLFLAVK--PHIIPFILDEIGADIEDRHIVVSCAAGVTISSIEKKLSAFRPAPRVIRCMTNTPVVVREGA 154 (322)
T ss_dssp CHHHHHHHCSEEEECSC--GGGHHHHHHHHGGGCCTTCEEEECCTTCCHHHHHHHHHTTSSCCEEEEEECCGGGGGTCEE
T ss_pred ChHHHhccCCEEEEEeC--HHHHHHHHHHHHhhcCCCCEEEEeCCCCCHHHHHHHHhhcCCCCeEEEEeCCcHHHHcCCe
Confidence 44 56788999999999 678888999999989889999998888888777665542 4589999999888777666
Q ss_pred EEe-cCCCCCHHHHHHHHHHHHHcCCeeEEEcCCC----ch--hhhhhhhHHHHHHHH--HHHcCCCHHHHHHHH
Q 004972 454 EIV-RTERTSAQVILDLMTVGKIIKKVPVVVGNCT----GF--AVNRAFFPYSQSARL--LVSLGVDVFRIDSAI 519 (721)
Q Consensus 454 Eiv-~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~~----gf--i~nRl~~~~~~Ea~~--l~~~Gv~~~~ID~a~ 519 (721)
.++ .++.++++.++.+.++++.+|..+++..+.- +. ..+-+++ .+.|++. ....|+++++.-.++
T Consensus 155 ~v~~~g~~~~~~~~~~v~~ll~~~G~~~~~~e~~~~~~~a~~g~gpa~~~-~~~eala~a~~~~Gl~~~~a~~l~ 228 (322)
T 2izz_A 155 TVYATGTHAQVEDGRLMEQLLSSVGFCTEVEEDLIDAVTGLSGSGPAYAF-TALDALADGGVKMGLPRRLAVRLG 228 (322)
T ss_dssp EEEEECTTCCHHHHHHHHHHHHTTEEEEECCGGGHHHHHHHTTTHHHHHH-HHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred EEEEeCCCCCHHHHHHHHHHHHhCCCEEEeCHHHHHHHHHHhcCHHHHHH-HHHHHHHHHHHHcCCCHHHHHHHH
Confidence 655 5777789999999999999998765432210 00 1122222 2334433 234588887766665
No 112
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=99.56 E-value=1.6e-14 Score=159.47 Aligned_cols=205 Identities=16% Similarity=0.162 Sum_probs=138.6
Q ss_pred CceeEEEEcCCCCcHHHHHHHHHC-CC-ceEEEeCCHH----HHHHHHHHH------HHHHHhhhhcCCCCHHHHHHhhc
Q 004972 304 GVRKVAVIGGGLMGSGIATAHILN-NI-YVVLKEVNSE----YLLKGIKTI------EANVRGLVTRGKLTQDKANNALK 371 (721)
Q Consensus 304 ~~~kI~VIG~G~mG~~iA~~la~~-G~-~V~l~d~~~~----~~~~~~~~~------~~~~~~~~~~g~~~~~~~~~~~~ 371 (721)
+++||+|||+|.||.++|..|+++ |+ +|++||++++ +++...+.. +..++.++++ ....+
T Consensus 17 ~~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~--------~~~~g 88 (478)
T 3g79_A 17 PIKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGK--------VVKAG 88 (478)
T ss_dssp SCCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHH--------HHHTT
T ss_pred CCCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHh--------hcccC
Confidence 467999999999999999999999 99 9999999999 877643210 0000000000 00136
Q ss_pred CceeccCccccCCCCEEEEcccCCh----------HHHHHHHHHHHhhCCCCeEEEecCCCCCHH---HHhc-----ccC
Q 004972 372 MLKGVLDYSEFKDVDMVIEAVIESV----------PLKQKIFSELEKACPPHCILATNTSTIDLN---IVGE-----KTS 433 (721)
Q Consensus 372 ~i~~~~~~~~l~~aDlVIeavpe~~----------~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~---~l~~-----~~~ 433 (721)
++.++++.+++++||+||+|||++. .......+++.++++++++|+. .||+++. ++.. ...
T Consensus 89 ~l~~ttd~ea~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~-~STv~pgtt~~v~~~ile~~~g 167 (478)
T 3g79_A 89 KFECTPDFSRISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVL-ESTITPGTTEGMAKQILEEESG 167 (478)
T ss_dssp CEEEESCGGGGGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEE-CSCCCTTTTTTHHHHHHHHHHC
T ss_pred CeEEeCcHHHHhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEE-eCCCChHHHHHHHHHHHHHhcC
Confidence 7888888888999999999998753 3456677889999999998864 4555543 2221 111
Q ss_pred C--CCcE-EEecCCCCCCCCCee---------EEecCCCCCHHHHHHHHHHHHHc-CCeeEEEcCCCc----hhhhhhh-
Q 004972 434 S--QDRI-IGAHFFSPAHVMPLL---------EIVRTERTSAQVILDLMTVGKII-KKVPVVVGNCTG----FAVNRAF- 495 (721)
Q Consensus 434 ~--~~r~-ig~h~~~p~~~~~lv---------Eiv~~~~t~~e~~~~~~~l~~~l-G~~~v~v~d~~g----fi~nRl~- 495 (721)
. ...| +. ++|....+.- -|+.| .+++..+.+.++++.+ ++.++++++... -++|.++
T Consensus 168 ~~~~~d~~v~---~~Pe~~~~G~a~~~~~~~~~Iv~G--~~~~~~~~~~~ly~~~~~~~~~~~~~~~~aE~~Kl~~N~~~ 242 (478)
T 3g79_A 168 LKAGEDFALA---HAPERVMVGRLLKNIREHDRIVGG--IDEASTKRAVELYSPVLTVGQVIPMSATAAEVTKTAENTFR 242 (478)
T ss_dssp CCBTTTBEEE---ECCCCCCTTSHHHHHHHSCEEEEE--SSHHHHHHHHHHHGGGCSSCCEEEEEHHHHHHHHHHHHHHH
T ss_pred CCcCCceeEE---eCCccCCccchhhhhcCCcEEEEe--CCHHHHHHHHHHHhhhccCCeEEeCCHHHHHHHHHHHHHHH
Confidence 1 0111 11 3444333221 25544 3688889999999999 888888865321 2334432
Q ss_pred ---hHHHHHHHHHHHc-CCCHHHHHHHH-Hhc
Q 004972 496 ---FPYSQSARLLVSL-GVDVFRIDSAI-RSF 522 (721)
Q Consensus 496 ---~~~~~Ea~~l~~~-Gv~~~~ID~a~-~~~ 522 (721)
.+++||+..+++. |+|+.++-.++ ...
T Consensus 243 a~~Ia~~nE~~~l~e~~GiD~~~v~~~~~~~~ 274 (478)
T 3g79_A 243 DLQIAAINQLALYCEAMGINVYDVRTGVDSLK 274 (478)
T ss_dssp HHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHCCCc
Confidence 4678999999988 99999998888 444
No 113
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=99.55 E-value=1.4e-13 Score=141.77 Aligned_cols=183 Identities=12% Similarity=0.090 Sum_probs=131.2
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCC-CceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cccC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNN-IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 383 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G-~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~ 383 (721)
+||+|||+|.||.++|..|+++| ++|++||+++++++...+. .| +..+++. +.+
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~~~----------~g-------------~~~~~~~~~~~- 56 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKE----------LG-------------VETSATLPELH- 56 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHH----------TC-------------CEEESSCCCCC-
T ss_pred CEEEEECchHHHHHHHHHHHHCCCCeEEEECCCHHHHHHHHHh----------cC-------------CEEeCCHHHHh-
Confidence 37999999999999999999999 9999999999887764321 01 3344454 567
Q ss_pred CCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhcccCCCCcEEEecCCCCCCCCC-eeEEecCCCCC
Q 004972 384 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMP-LLEIVRTERTS 462 (721)
Q Consensus 384 ~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~~l~~~~~~~~r~ig~h~~~p~~~~~-lvEiv~~~~t~ 462 (721)
+||+||+|+| .....+++.++.+ + +++|++.++++++..+.+.+....+++..++..|..... ...++++..++
T Consensus 57 ~~D~vi~~v~--~~~~~~v~~~l~~--~-~~ivv~~~~g~~~~~l~~~~~~~~~~v~~~~~~~~~~~~g~~~i~~~~~~~ 131 (263)
T 1yqg_A 57 SDDVLILAVK--PQDMEAACKNIRT--N-GALVLSVAAGLSVGTLSRYLGGTRRIVRVMPNTPGKIGLGVSGMYAEAEVS 131 (263)
T ss_dssp TTSEEEECSC--HHHHHHHHTTCCC--T-TCEEEECCTTCCHHHHHHHTTSCCCEEEEECCGGGGGTCEEEEEECCTTSC
T ss_pred cCCEEEEEeC--chhHHHHHHHhcc--C-CCEEEEecCCCCHHHHHHHcCCCCcEEEEcCCHHHHHcCceEEEEcCCCCC
Confidence 9999999999 6666777776655 4 889999889999888887776656888886655665554 34566777789
Q ss_pred HHHHHHHHHHHHHcCCeeEEEc-CC--------CchhhhhhhhHHHHHHHH-HHHcCCCHHHHHHHH
Q 004972 463 AQVILDLMTVGKIIKKVPVVVG-NC--------TGFAVNRAFFPYSQSARL-LVSLGVDVFRIDSAI 519 (721)
Q Consensus 463 ~e~~~~~~~l~~~lG~~~v~v~-d~--------~gfi~nRl~~~~~~Ea~~-l~~~Gv~~~~ID~a~ 519 (721)
++.++.+.++++.+|..+ +++ +. .| ..+..+..++..... ....|++++++...+
T Consensus 132 ~~~~~~~~~l~~~~g~~~-~~~~~~~~~~~~al~g-~~~~~~~~~~~~l~e~~~~~G~~~~~~~~~~ 196 (263)
T 1yqg_A 132 ETDRRIADRIMKSVGLTV-WLDDEEKMHGITGISG-SGPAYVFYLLDALQNAAIRQGFDMAEARALS 196 (263)
T ss_dssp HHHHHHHHHHHHTTEEEE-ECSSTTHHHHHHHHTT-SHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCEE-EeCChhhccHHHHHHc-cHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 999999999999999876 666 41 11 111122222221111 334588887777666
No 114
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=99.54 E-value=8.4e-14 Score=147.28 Aligned_cols=193 Identities=12% Similarity=0.064 Sum_probs=127.7
Q ss_pred ceeEEEEcCCCCcHHHHHHHHHCC-CceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceec-cCcccc
Q 004972 305 VRKVAVIGGGLMGSGIATAHILNN-IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGV-LDYSEF 382 (721)
Q Consensus 305 ~~kI~VIG~G~mG~~iA~~la~~G-~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~-~~~~~l 382 (721)
++||+|||+|.||.++|..|+++| ++|++||++++..+++.+..+ ...+.| + .+ +..+.+
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~----~~~~~g-------------~-~~~s~~e~~ 85 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRA----RAAELG-------------V-EPLDDVAGI 85 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHH----HHHHTT-------------C-EEESSGGGG
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHH----HHHHCC-------------C-CCCCHHHHH
Confidence 468999999999999999999999 999999999832111111110 111122 2 33 334678
Q ss_pred CCCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHH--HHhcccC-CCCcEEEecCCCCC--CCCCeeEEec
Q 004972 383 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFFSPA--HVMPLLEIVR 457 (721)
Q Consensus 383 ~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~--~l~~~~~-~~~r~ig~h~~~p~--~~~~lvEiv~ 457 (721)
++||+||+|||.+... +.+.++.+.++++++|++.++..+.+ .+.+.+. ...+|+....+.|. ....+..++.
T Consensus 86 ~~aDvVi~avp~~~~~--~~~~~i~~~l~~~~ivv~~st~~p~~~~~~~~~l~~~g~~~~d~pv~g~~~a~~g~l~i~vg 163 (317)
T 4ezb_A 86 ACADVVLSLVVGAATK--AVAASAAPHLSDEAVFIDLNSVGPDTKALAAGAIATGKGSFVEGAVMARVPPYAEKVPILVA 163 (317)
T ss_dssp GGCSEEEECCCGGGHH--HHHHHHGGGCCTTCEEEECCSCCHHHHHHHHHHHHTSSCEEEEEEECSCSTTTGGGSEEEEE
T ss_pred hcCCEEEEecCCHHHH--HHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEeccCCCCchhhcCCEEEEEe
Confidence 9999999999965544 45688888999999888765443322 3333332 22345543323332 2344565666
Q ss_pred CCCCCHHHHHHHHHHHHHcCCeeEEEcCCCch-----hhhhh----hhHHHHHHHHHHHc-CCCHHHHHHHHHhc
Q 004972 458 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGF-----AVNRA----FFPYSQSARLLVSL-GVDVFRIDSAIRSF 522 (721)
Q Consensus 458 ~~~t~~e~~~~~~~l~~~lG~~~v~v~d~~gf-----i~nRl----~~~~~~Ea~~l~~~-Gv~~~~ID~a~~~~ 522 (721)
++. + +.++++++.+|+.++++++.+|- ++|.+ ..+.++|++.+++. |++++.++.+..+.
T Consensus 164 g~~---~--~~~~~ll~~~g~~v~~~g~~~g~a~~~Kl~~N~~~~~~~~~~~E~~~la~~~Gid~~~~~~l~~~~ 233 (317)
T 4ezb_A 164 GRR---A--VEVAERLNALGMNLEAVGETPGQASSLKMIRSVMIKGVEALLIEALSSAERAGVTERILDSVQETF 233 (317)
T ss_dssp STT---H--HHHHHHHHTTTCEEEEEESSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHS
T ss_pred CCh---H--HHHHHHHHHhCCCeEEeCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhcC
Confidence 643 2 78999999999999999876662 33333 35567899999987 99997666665443
No 115
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=99.54 E-value=2.2e-14 Score=151.15 Aligned_cols=189 Identities=11% Similarity=0.043 Sum_probs=130.3
Q ss_pred CceeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-ccc
Q 004972 304 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 382 (721)
Q Consensus 304 ~~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l 382 (721)
.++||+|||+|.||.+||..|+++|++|++||+++++++.+.+ .| +...++. +.+
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~-----------~g-------------~~~~~~~~e~~ 63 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVA-----------AG-------------AHLCESVKAAL 63 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHH-----------HT-------------CEECSSHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----------CC-------------CeecCCHHHHH
Confidence 3568999999999999999999999999999999998776432 11 3334455 567
Q ss_pred CCCCEEEEcccCChHHHHHHHH--HHHhhCCCCeEEEecCCCCCHH--HHhcccC-CCCcEEEecCCCCC-CC--CCeeE
Q 004972 383 KDVDMVIEAVIESVPLKQKIFS--ELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFFSPA-HV--MPLLE 454 (721)
Q Consensus 383 ~~aDlVIeavpe~~~~k~~v~~--~l~~~~~~~~ii~s~ts~~~i~--~l~~~~~-~~~r~ig~h~~~p~-~~--~~lvE 454 (721)
++||+||+|||++..++ .++. .+... .++++|++.++..+.. .+.+.+. ...+|+....+.++ .. ..++.
T Consensus 64 ~~aDvVi~~vp~~~~~~-~v~~~~~l~~~-~~g~ivid~st~~~~~~~~l~~~~~~~g~~~vdapv~g~~~~~~~~~~~i 141 (306)
T 3l6d_A 64 SASPATIFVLLDNHATH-EVLGMPGVARA-LAHRTIVDYTTNAQDEGLALQGLVNQAGGHYVKGMIVAYPRNVGHRESHS 141 (306)
T ss_dssp HHSSEEEECCSSHHHHH-HHHTSTTHHHH-TTTCEEEECCCCCTTHHHHHHHHHHHTTCEEEEEEEESCGGGTTCTTCEE
T ss_pred hcCCEEEEEeCCHHHHH-HHhcccchhhc-cCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEecccccCcccccCCceEE
Confidence 88999999999655544 4444 56554 5777776544443322 3333332 33456554332211 11 12333
Q ss_pred EecCCCCCHHHHHHHHHHHHHcCCeeEEE--cC--CCchhhhhhh---hHHHHHHHHHHHc-CCCHHHHHHHH-Hh
Q 004972 455 IVRTERTSAQVILDLMTVGKIIKKVPVVV--GN--CTGFAVNRAF---FPYSQSARLLVSL-GVDVFRIDSAI-RS 521 (721)
Q Consensus 455 iv~~~~t~~e~~~~~~~l~~~lG~~~v~v--~d--~~gfi~nRl~---~~~~~Ea~~l~~~-Gv~~~~ID~a~-~~ 521 (721)
++.+ ++++++.++++++.+|++++++ ++ ..|...+-++ ...++|++.+++. |++++++..++ .+
T Consensus 142 ~~gg---~~~~~~~~~~ll~~lg~~~~~~~~g~~~g~g~~~k~~~~~~~~~~~Ea~~la~~~Gld~~~~~~~~~~~ 214 (306)
T 3l6d_A 142 IHTG---DREAFEQHRALLEGLAGHTVFLPWDEALAFATVLHAHAFAAMVTFFEAVGAGDRFGLPVSKTARLLLET 214 (306)
T ss_dssp EEEE---CHHHHHHHHHHHHTTCSEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred EEcC---CHHHHHHHHHHHHHhcCCEEEecCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHh
Confidence 4444 6999999999999998899999 75 4567776332 3456799998877 99999999988 44
No 116
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=99.53 E-value=1.4e-14 Score=153.52 Aligned_cols=188 Identities=15% Similarity=0.122 Sum_probs=135.4
Q ss_pred CceeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-ccc
Q 004972 304 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 382 (721)
Q Consensus 304 ~~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l 382 (721)
.++||+|||+|.||..+|..|++.|++|++||++++.++...+ .| +..+++. +.+
T Consensus 29 ~~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~-----------~g-------------~~~~~~~~~~~ 84 (316)
T 2uyy_A 29 TDKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQ-----------EG-------------ARLGRTPAEVV 84 (316)
T ss_dssp CSSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGGGGHHHHH-----------TT-------------CEECSCHHHHH
T ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH-----------cC-------------CEEcCCHHHHH
Confidence 3578999999999999999999999999999999987665321 12 2233444 557
Q ss_pred CCCCEEEEcccCChHHHHHHHHH---HHhhCCCCeEEEecCCCCC--HHHHhcccC-CCCcEEEecCCCCC---CCCCee
Q 004972 383 KDVDMVIEAVIESVPLKQKIFSE---LEKACPPHCILATNTSTID--LNIVGEKTS-SQDRIIGAHFFSPA---HVMPLL 453 (721)
Q Consensus 383 ~~aDlVIeavpe~~~~k~~v~~~---l~~~~~~~~ii~s~ts~~~--i~~l~~~~~-~~~r~ig~h~~~p~---~~~~lv 453 (721)
++||+||+|+|++..++ .++.+ +.+.+.++++|++.+++.+ ..++.+.+. .+.++++.++++.+ ..+.++
T Consensus 85 ~~~DvVi~av~~~~~~~-~v~~~~~~~~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~~~~~v~~p~~g~~~~~~~g~~~ 163 (316)
T 2uyy_A 85 STCDITFACVSDPKAAK-DLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLSNDGMLV 163 (316)
T ss_dssp HHCSEEEECCSSHHHHH-HHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEESCHHHHHHTCEE
T ss_pred hcCCEEEEeCCCHHHHH-HHHcCchhHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEEcCccCChhHHhhCCEE
Confidence 88999999999655554 44443 3366778888876544332 345555543 45678887766432 234556
Q ss_pred EEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCC-----Cchhhhhh---hhHHHHHHHHHHHc-CCCHHHHHHHH
Q 004972 454 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC-----TGFAVNRA---FFPYSQSARLLVSL-GVDVFRIDSAI 519 (721)
Q Consensus 454 Eiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~-----~gfi~nRl---~~~~~~Ea~~l~~~-Gv~~~~ID~a~ 519 (721)
.++++ +++.++.+.++++.+|+.++++++. ..++.|.+ +..+++|++.+.+. |+++++++.++
T Consensus 164 ~~~~g---~~~~~~~v~~ll~~~g~~~~~~~~~~~~~~~K~~~n~~~~~~~~~~~Ea~~la~~~G~~~~~~~~~~ 235 (316)
T 2uyy_A 164 ILAAG---DRGLYEDCSSCFQAMGKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEGLTLAQVTGQSQQTLLDIL 235 (316)
T ss_dssp EEEEE---CHHHHHHTHHHHHHHEEEEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred EEeCC---CHHHHHHHHHHHHHhcCCEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 66666 5789999999999999999888762 12456766 45667899998876 99999999988
No 117
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=99.53 E-value=2.1e-14 Score=152.45 Aligned_cols=154 Identities=14% Similarity=0.157 Sum_probs=116.9
Q ss_pred CceeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-ccc
Q 004972 304 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 382 (721)
Q Consensus 304 ~~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l 382 (721)
.++||+|||+|.||++||..|.++|++|++||++++.++.+.+ .| +..+++. +.+
T Consensus 7 ~~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~~~~~~a~~-----------~G-------------~~~~~~~~e~~ 62 (341)
T 3ktd_A 7 ISRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSRSGAKSAVD-----------EG-------------FDVSADLEATL 62 (341)
T ss_dssp CSSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHH-----------TT-------------CCEESCHHHHH
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----------cC-------------CeeeCCHHHHH
Confidence 3578999999999999999999999999999999998776421 12 1223343 333
Q ss_pred ----CCCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCC--HHHHhcccCCCCcEEEecCCCCCCC-------
Q 004972 383 ----KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID--LNIVGEKTSSQDRIIGAHFFSPAHV------- 449 (721)
Q Consensus 383 ----~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~--i~~l~~~~~~~~r~ig~h~~~p~~~------- 449 (721)
++||+||+||| ......+++++.++ +++++|++.+|+.. +..+..... ..+|++.||...+..
T Consensus 63 ~~a~~~aDlVilavP--~~~~~~vl~~l~~~-~~~~iv~Dv~Svk~~i~~~~~~~~~-~~~~v~~HPmaG~e~sG~~aa~ 138 (341)
T 3ktd_A 63 QRAAAEDALIVLAVP--MTAIDSLLDAVHTH-APNNGFTDVVSVKTAVYDAVKARNM-QHRYVGSHPMAGTANSGWSASM 138 (341)
T ss_dssp HHHHHTTCEEEECSC--HHHHHHHHHHHHHH-CTTCCEEECCSCSHHHHHHHHHTTC-GGGEECEEECCSCC-CCGGGCC
T ss_pred HhcccCCCEEEEeCC--HHHHHHHHHHHHcc-CCCCEEEEcCCCChHHHHHHHHhCC-CCcEecCCccccccccchhhhh
Confidence 35799999999 77788999999887 78888876655432 334544432 468999999876531
Q ss_pred -----CCeeEEecCCCCCHH--------HHHHHHHHHHHcCCeeEEEcC
Q 004972 450 -----MPLLEIVRTERTSAQ--------VILDLMTVGKIIKKVPVVVGN 485 (721)
Q Consensus 450 -----~~lvEiv~~~~t~~e--------~~~~~~~l~~~lG~~~v~v~d 485 (721)
+..+-+++++.++++ .++.+.++++.+|++++++.+
T Consensus 139 ~~Lf~g~~~iltp~~~~~~e~~~~~~~~~~~~v~~l~~~~Ga~v~~~~~ 187 (341)
T 3ktd_A 139 DGLFKRAVWVVTFDQLFDGTDINSTWISIWKDVVQMALAVGAEVVPSRV 187 (341)
T ss_dssp SSTTTTCEEEECCGGGTSSCCCCHHHHHHHHHHHHHHHHTTCEEEECCH
T ss_pred hHHhcCCeEEEEeCCCCChhhhccchHHHHHHHHHHHHHcCCEEEEeCH
Confidence 224667788888888 999999999999999999853
No 118
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=99.52 E-value=6.9e-14 Score=146.20 Aligned_cols=159 Identities=14% Similarity=0.093 Sum_probs=121.0
Q ss_pred CCceeEEEEcCCCCcHHHHHHHHHC--CCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-
Q 004972 303 RGVRKVAVIGGGLMGSGIATAHILN--NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY- 379 (721)
Q Consensus 303 ~~~~kI~VIG~G~mG~~iA~~la~~--G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~- 379 (721)
|+++||+|||+|.||+++|..|+++ |++|++||++++.++.+. +.|.. ...++++
T Consensus 4 M~~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~-----------~~g~~-----------~~~~~~~~ 61 (290)
T 3b1f_A 4 MEEKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIAL-----------ERGIV-----------DEATADFK 61 (290)
T ss_dssp GCCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHH-----------HTTSC-----------SEEESCTT
T ss_pred cccceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHH-----------HcCCc-----------ccccCCHH
Confidence 4467999999999999999999987 679999999998876542 11211 0234455
Q ss_pred cccCCCCEEEEcccCChHHHHHHHHHHHhh-CCCCeEEEecCCCCC--HHHHhcccCC-CCcEEEecCC------CCCC-
Q 004972 380 SEFKDVDMVIEAVIESVPLKQKIFSELEKA-CPPHCILATNTSTID--LNIVGEKTSS-QDRIIGAHFF------SPAH- 448 (721)
Q Consensus 380 ~~l~~aDlVIeavpe~~~~k~~v~~~l~~~-~~~~~ii~s~ts~~~--i~~l~~~~~~-~~r~ig~h~~------~p~~- 448 (721)
+.+++||+||+||| .....+++.++.+. ++++++|++.+++.. ...+.+.+.. ..++++.||+ .|..
T Consensus 62 ~~~~~aDvVilavp--~~~~~~v~~~l~~~~l~~~~ivi~~~~~~~~~~~~l~~~l~~~~~~~v~~~P~~g~~~~g~~~a 139 (290)
T 3b1f_A 62 VFAALADVIILAVP--IKKTIDFIKILADLDLKEDVIITDAGSTKYEIVRAAEYYLKDKPVQFVGSHPMAGSHKSGAVAA 139 (290)
T ss_dssp TTGGGCSEEEECSC--HHHHHHHHHHHHTSCCCTTCEEECCCSCHHHHHHHHHHHHTTSSCEEEEEEEC-----CCTTSC
T ss_pred HhhcCCCEEEEcCC--HHHHHHHHHHHHhcCCCCCCEEEECCCCchHHHHHHHHhccccCCEEEEeCCcCCCCcchHHHh
Confidence 56789999999999 55568899999888 888998876544322 2455555554 5789999997 4443
Q ss_pred -----CCCeeEEecCCCCCHHHHHHHHHHHHHcCCeeEEEcC
Q 004972 449 -----VMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 485 (721)
Q Consensus 449 -----~~~lvEiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d 485 (721)
.+..+.++++..++++.++.+.++++.+|..++++.+
T Consensus 140 ~~~l~~g~~~~~~~~~~~~~~~~~~v~~l~~~~G~~~~~~~~ 181 (290)
T 3b1f_A 140 NVNLFENAYYIFSPSCLTKPNTIPALQDLLSGLHARYVEIDA 181 (290)
T ss_dssp CTTTTTTSEEEEEECTTCCTTHHHHHHHHTGGGCCEEEECCH
T ss_pred hHHHhCCCeEEEecCCCCCHHHHHHHHHHHHHcCCEEEEcCH
Confidence 3355778888888999999999999999999888764
No 119
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=99.52 E-value=1.8e-14 Score=151.63 Aligned_cols=90 Identities=27% Similarity=0.372 Sum_probs=85.2
Q ss_pred hHHHHHHHHHHHHHHHHHHhhcCcCCChhHHHHHHHHccCCCCCCCcHhHHHHHhCHHHHHHHHHHHHHhh-CC-CCCCC
Q 004972 617 EKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLY-GN-FFKPS 694 (721)
Q Consensus 617 ~~~i~~r~~~~~~~ea~~~l~~gv~~~~~~iD~~~~~g~g~~~~~~Gp~~~~d~~G~~~~~~~~~~~~~~~-~~-~~~p~ 694 (721)
++++.||++.+++||+++++++|++ ++++||.++..|+|||. |||+++|.+|+|.++++++.+.+.+ ++ +|.|+
T Consensus 203 ~g~i~nr~l~~~~~Ea~~l~~~g~~-~~~~id~~~~~g~g~p~---GP~~~~D~~Gld~~~~~~~~l~~~~~~~~~~~~~ 278 (302)
T 1f0y_A 203 PGFIVNRLLVPYLMEAIRLYERGDA-SKEDIDTAMKLGAGYPM---GPFELLDYVGLDTTKFIVDGWHEMDAENPLHQPS 278 (302)
T ss_dssp TTTTHHHHHHHHHHHHHHHHHTTSS-CHHHHHHHHHHHHCCSS---CHHHHHHHHCHHHHHHHHHHHHHTTTTCGGGCCC
T ss_pred ccccHHHHHHHHHHHHHHHHHcCCC-CHHHHHHHHHhCCCCCC---CHHHHHHHHHHHHHHHHHHHHHHHccCCCccCcC
Confidence 4789999999999999999999999 99999999999999995 9999999999999999999999888 77 59999
Q ss_pred HHHHHHH-------HcCCCCcCC
Q 004972 695 RFLEERA-------TKGIPLSAP 710 (721)
Q Consensus 695 ~~l~~~~-------~~g~~f~~~ 710 (721)
++|++|+ |+|+|||+|
T Consensus 279 ~~l~~~~~~g~~G~k~g~Gfy~y 301 (302)
T 1f0y_A 279 PSLNKLVAENKFGKKTGEGFYKY 301 (302)
T ss_dssp HHHHHHHHTTCCBTTTTBSSSBC
T ss_pred HHHHHHHHcCCCccccCcEeeeC
Confidence 9999999 678999999
No 120
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=99.52 E-value=3.9e-15 Score=154.55 Aligned_cols=93 Identities=24% Similarity=0.314 Sum_probs=87.6
Q ss_pred HHHHHHHHHHHHHHHHHhhcCcCCChhHHHHHHHHccCCCCCCCcHhHHHHHhCHHHHHHHHHHHHHhhCC-CCCCCHHH
Q 004972 619 EIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN-FFKPSRFL 697 (721)
Q Consensus 619 ~i~~r~~~~~~~ea~~~l~~gv~~~~~~iD~~~~~g~g~~~~~~Gp~~~~d~~G~~~~~~~~~~~~~~~~~-~~~p~~~l 697 (721)
++.||++.++++||+.++++|+ ++++||.++..|+|+|++..|||+++|.+|+|.++.+++.+++.+++ +|.|+++|
T Consensus 174 fi~Nrll~~~~~EA~~l~~~Gv--~~e~id~~~~~g~g~~~~~~GP~~l~D~~Gld~~~~~~~~l~~~~~~~~~~~~~~l 251 (293)
T 1zej_A 174 SLVNRFNAAVLSEASRMIEEGV--RAEDVDRVWKHHLGLLYTLFGPLGNLDYIGLDVAYYASLYLYKRFGDEKFKPPEWL 251 (293)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTC--CHHHHHHHHHTTHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCGGGSCCHHH
T ss_pred ccHHHHHHHHHHHHHHHHHhCC--CHHHHHHHHHhcCCCCCCCCCHHHHHHHhchHHHHHHHHHHHHHcCCCcCCCCHHH
Confidence 8999999999999999999998 79999999999999988788999999999999999999999999887 89999999
Q ss_pred HHHH-------HcCCCCcCCCCC
Q 004972 698 EERA-------TKGIPLSAPVSS 713 (721)
Q Consensus 698 ~~~~-------~~g~~f~~~~~~ 713 (721)
++|+ |+|+|||+|++.
T Consensus 252 ~~~v~~G~lG~Ktg~Gfy~y~~~ 274 (293)
T 1zej_A 252 QEKIKKGEVGVKAGKGIYEYGPK 274 (293)
T ss_dssp HHHHHTTCCBGGGTBSSSBCCTT
T ss_pred HHHHHCCCCccccCCEeeecCcc
Confidence 9999 689999999553
No 121
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=99.50 E-value=1.5e-13 Score=149.79 Aligned_cols=201 Identities=13% Similarity=0.087 Sum_probs=133.1
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHH-HH--hhcCceeccCcccc
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA-NN--ALKMLKGVLDYSEF 382 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~--~~~~i~~~~~~~~l 382 (721)
.|..|||+|.||.++|.+|+++||+|++||+++++++...+... ....-.-++. .. ..+++.+++++
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~kv~~L~~g~~-------pi~epgl~~ll~~~~~~g~l~~ttd~--- 81 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQNGQI-------SIEEPGLQEVYEEVLSSGKLKVSTTP--- 81 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCC-------SSCCTTHHHHHHHHHHTTCEEEESSC---
T ss_pred CccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCC-------CcCCCCHHHHHHhhcccCceEEeCch---
Confidence 68999999999999999999999999999999999887643100 0000000000 00 12568888774
Q ss_pred CCCCEEEEcccCChH----------HHHHHHHHHHhhCCCCeEEEecCCCCCHHH---Hhccc-C-CCCcE-EEecC-CC
Q 004972 383 KDVDMVIEAVIESVP----------LKQKIFSELEKACPPHCILATNTSTIDLNI---VGEKT-S-SQDRI-IGAHF-FS 445 (721)
Q Consensus 383 ~~aDlVIeavpe~~~----------~k~~v~~~l~~~~~~~~ii~s~ts~~~i~~---l~~~~-~-~~~r~-ig~h~-~~ 445 (721)
++||+||.|||.+.. ......+.+.++++++++|+. .||+++.. +...+ . ...++ ...++ ++
T Consensus 82 ~~aDvvii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~-~STV~pgtt~~v~~~i~e~~g~~~~~d~~v~~~ 160 (431)
T 3ojo_A 82 EASDVFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIV-ESTIAPKTMDDFVKPVIENLGFTIGEDIYLVHC 160 (431)
T ss_dssp CCCSEEEECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEE-CSCCCTTHHHHTHHHHHHTTTCCBTTTEEEEEC
T ss_pred hhCCEEEEEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEE-ecCCChhHHHHHHHHHHHHcCCCcCCCeEEEEC
Confidence 589999999997652 456667889999999998875 44555432 22211 1 11110 00111 34
Q ss_pred CCCCCCee---------EEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCC-c---hhhhhhh----hHHHHHHHHHHHc
Q 004972 446 PAHVMPLL---------EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT-G---FAVNRAF----FPYSQSARLLVSL 508 (721)
Q Consensus 446 p~~~~~lv---------Eiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~~-g---fi~nRl~----~~~~~Ea~~l~~~ 508 (721)
|....+.- -|+.|. ++++.+.++++++.+++.++++++.. + -++|.++ .+++||+..+++.
T Consensus 161 Pe~~~~G~A~~~~~~p~~Iv~G~--~~~~~~~~~~ly~~~~~~~~~~~~~~~AE~~Kl~~N~~~a~~Ia~~nE~~~l~e~ 238 (431)
T 3ojo_A 161 PERVLPGKILEELVHNNRIIGGV--TKACIEAGKRVYRTFVQGEMIETDARTAEMSKLMENTYRDVNIALANELTKICNN 238 (431)
T ss_dssp CCCCCTTSHHHHHHHSCEEEEES--SHHHHHHHHHHHTTTCCSCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcCCCcchhhcccCCCEEEEeC--CHHHHHHHHHHHHHHhCCcEEeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44333321 355553 68999999999999998888875421 1 2334443 4568999999988
Q ss_pred -CCCHHHHHHHH
Q 004972 509 -GVDVFRIDSAI 519 (721)
Q Consensus 509 -Gv~~~~ID~a~ 519 (721)
|+|+.++-.++
T Consensus 239 ~GiD~~~v~~~~ 250 (431)
T 3ojo_A 239 LNINVLDVIEMA 250 (431)
T ss_dssp TTCCHHHHHHHH
T ss_pred cCCCHHHHHHHH
Confidence 99999999988
No 122
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=99.49 E-value=4.9e-13 Score=141.16 Aligned_cols=168 Identities=15% Similarity=0.182 Sum_probs=114.2
Q ss_pred ceeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCcc---c
Q 004972 305 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS---E 381 (721)
Q Consensus 305 ~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~---~ 381 (721)
|+||+|||+|.||+.+|..|+++|++|++||++++.++...+. ...-.. .. .....++..+++.+ .
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~------g~~~~~-~~----~~~~~~~~~~~~~~~~~~ 71 (316)
T 2ew2_A 3 AMKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKN------GLIADF-NG----EEVVANLPIFSPEEIDHQ 71 (316)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH------CEEEEE-TT----EEEEECCCEECGGGCCTT
T ss_pred CCeEEEECcCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhC------CEEEEe-CC----CeeEecceeecchhhccc
Confidence 4689999999999999999999999999999999887765321 000000 00 00001222233222 3
Q ss_pred cCCCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCH-HHHhcccCCCCcEE-EecCCCCCCCCC--------
Q 004972 382 FKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL-NIVGEKTSSQDRII-GAHFFSPAHVMP-------- 451 (721)
Q Consensus 382 l~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i-~~l~~~~~~~~r~i-g~h~~~p~~~~~-------- 451 (721)
++++|+||+|+| .....++++++.+.++++++|++.++++.. ..+.+.+. +.+++ |.++...+..+|
T Consensus 72 ~~~~d~vi~~v~--~~~~~~v~~~l~~~l~~~~~iv~~~~g~~~~~~l~~~~~-~~~vi~g~~~~~~~~~~p~~~~~~~~ 148 (316)
T 2ew2_A 72 NEQVDLIIALTK--AQQLDAMFKAIQPMITEKTYVLCLLNGLGHEDVLEKYVP-KENILVGITMWTAGLEGPGRVKLLGD 148 (316)
T ss_dssp SCCCSEEEECSC--HHHHHHHHHHHGGGCCTTCEEEECCSSSCTHHHHTTTSC-GGGEEEEEECCCCEEEETTEEEECSC
T ss_pred CCCCCEEEEEec--cccHHHHHHHHHHhcCCCCEEEEecCCCCcHHHHHHHcC-CccEEEEEeeeeeEEcCCCEEEEecC
Confidence 348999999999 556788999999999999999988888776 45555554 33677 444433222222
Q ss_pred -eeEEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCC
Q 004972 452 -LLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 486 (721)
Q Consensus 452 -lvEiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~ 486 (721)
.+.+.....++++..+.+.++++.+|..+++..|.
T Consensus 149 g~~~i~~~~~~~~~~~~~~~~ll~~~g~~~~~~~d~ 184 (316)
T 2ew2_A 149 GEIELENIDPSGKKFALEVVDVFQKAGLNPSYSSNV 184 (316)
T ss_dssp CCEEEEESSGGGHHHHHHHHHHHHHTTCCEEECTTH
T ss_pred CcEEEeecCCCccHHHHHHHHHHHhCCCCcEEchhH
Confidence 12344444567899999999999999988777664
No 123
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=99.49 E-value=2.4e-13 Score=139.64 Aligned_cols=185 Identities=12% Similarity=0.103 Sum_probs=130.8
Q ss_pred ceeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cccC
Q 004972 305 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 383 (721)
Q Consensus 305 ~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~ 383 (721)
++||+|||+|.||..++..|.+.|++|++||+++++++...+.. | +..++++ +.++
T Consensus 3 ~m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~----------g-------------~~~~~~~~~~~~ 59 (259)
T 2ahr_A 3 AMKIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL----------A-------------LPYAMSHQDLID 59 (259)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH----------T-------------CCBCSSHHHHHH
T ss_pred ccEEEEECCCHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHc----------C-------------CEeeCCHHHHHh
Confidence 35899999999999999999999999999999998876643210 1 2234444 4567
Q ss_pred CCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhcccCCCCcEEEecCCCCCCCCCe-eEEecCCCCC
Q 004972 384 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPL-LEIVRTERTS 462 (721)
Q Consensus 384 ~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~~l~~~~~~~~r~ig~h~~~p~~~~~l-vEiv~~~~t~ 462 (721)
++|+||+|+| .....+++.++ .+++++++.++++++.++.+.+....+++..|+..|...... ..++++..++
T Consensus 60 ~~D~Vi~~v~--~~~~~~v~~~l----~~~~~vv~~~~~~~~~~l~~~~~~~~~~v~~~p~~~~~~~~g~~~i~~~~~~~ 133 (259)
T 2ahr_A 60 QVDLVILGIK--PQLFETVLKPL----HFKQPIISMAAGISLQRLATFVGQDLPLLRIMPNMNAQILQSSTALTGNALVS 133 (259)
T ss_dssp TCSEEEECSC--GGGHHHHHTTS----CCCSCEEECCTTCCHHHHHHHHCTTSCEEEEECCGGGGGTCEEEEEEECTTCC
T ss_pred cCCEEEEEeC--cHhHHHHHHHh----ccCCEEEEeCCCCCHHHHHHhcCCCCCEEEEcCCchHHHcCceEEEEcCCCCC
Confidence 9999999999 45555565543 467788888888888888877765557888888877776653 5566777789
Q ss_pred HHHHHHHHHHHHHcCCeeEEEcCCC-c-h-----hhhhhhhHHHHHHH-HHHHcCCCHHHHHHHH
Q 004972 463 AQVILDLMTVGKIIKKVPVVVGNCT-G-F-----AVNRAFFPYSQSAR-LLVSLGVDVFRIDSAI 519 (721)
Q Consensus 463 ~e~~~~~~~l~~~lG~~~v~v~d~~-g-f-----i~nRl~~~~~~Ea~-~l~~~Gv~~~~ID~a~ 519 (721)
++.++.+.++++.+| .++++++.. . + -.|.++..+..... .....|++++++-.++
T Consensus 134 ~~~~~~~~~ll~~~G-~~~~~~~~~~d~~~al~g~~~~~~~~~~~~la~~~~~~Gl~~~~~~~~~ 197 (259)
T 2ahr_A 134 QELQARVRDLTDSFG-STFDISEKDFDTFTALAGSSPAYIYLFIEALAKAGVKNGIPKAKALEIV 197 (259)
T ss_dssp HHHHHHHHHHHHTTE-EEEECCGGGHHHHHHHHTTHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhCC-CEEEecHHHccHHHHHhccHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 999999999999999 577776521 0 0 01222233332221 2344588877766665
No 124
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=99.49 E-value=8.5e-14 Score=146.29 Aligned_cols=186 Identities=16% Similarity=0.140 Sum_probs=130.0
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cccCC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 384 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 384 (721)
+||+|||+|.||..+|..|++.|++|++||++++.++...+ .| +...+++ +.+++
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~-----------~g-------------~~~~~~~~~~~~~ 60 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEGVTVYAFDLMEANVAAVVA-----------QG-------------AQACENNQKVAAA 60 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHT-----------TT-------------CEECSSHHHHHHH
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-----------CC-------------CeecCCHHHHHhC
Confidence 58999999999999999999999999999999988765421 11 3334455 45678
Q ss_pred CCEEEEcccCChHHHHHHH--HHHHhhCCCCeEEEecCCCCC--HHHHhcccCC-CCcEEEecCCCCCC----CCCeeEE
Q 004972 385 VDMVIEAVIESVPLKQKIF--SELEKACPPHCILATNTSTID--LNIVGEKTSS-QDRIIGAHFFSPAH----VMPLLEI 455 (721)
Q Consensus 385 aDlVIeavpe~~~~k~~v~--~~l~~~~~~~~ii~s~ts~~~--i~~l~~~~~~-~~r~ig~h~~~p~~----~~~lvEi 455 (721)
+|+||+|+|.+..++..+. .++.+.++++++|++.+++.+ ..++.+.+.. ..+++.. +..+.. ...+..+
T Consensus 61 ~D~vi~~vp~~~~~~~v~~~~~~l~~~l~~~~~vv~~~~~~~~~~~~l~~~~~~~g~~~~~~-p~~~~~~~a~~g~~~~~ 139 (301)
T 3cky_A 61 SDIIFTSLPNAGIVETVMNGPGGVLSACKAGTVIVDMSSVSPSSTLKMAKVAAEKGIDYVDA-PVSGGTKGAEAGTLTIM 139 (301)
T ss_dssp CSEEEECCSSHHHHHHHHHSTTCHHHHSCTTCEEEECCCCCHHHHHHHHHHHHHTTCEEEEC-CEESHHHHHHHTCEEEE
T ss_pred CCEEEEECCCHHHHHHHHcCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEEc-cCCCCHHHHHcCCeEEE
Confidence 9999999986555544433 278888899999988777763 3455554432 2344432 211110 0122333
Q ss_pred ecCCCCCHHHHHHHHHHHHHcCCeeEEEcC-CCc----hhhhhh---hhHHHHHHHHHHHc-CCCHHHHHHHH
Q 004972 456 VRTERTSAQVILDLMTVGKIIKKVPVVVGN-CTG----FAVNRA---FFPYSQSARLLVSL-GVDVFRIDSAI 519 (721)
Q Consensus 456 v~~~~t~~e~~~~~~~l~~~lG~~~v~v~d-~~g----fi~nRl---~~~~~~Ea~~l~~~-Gv~~~~ID~a~ 519 (721)
+.+ +++.++.+.++++.+|..++++++ ..| ++.|.+ +...++|++.+.+. |+++++++.++
T Consensus 140 ~~g---~~~~~~~v~~ll~~~g~~~~~~~~~g~~~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~ 209 (301)
T 3cky_A 140 VGA---SEAVFEKIQPVLSVIGKDIYHVGDTGAGDAVKIVNNLLLGCNMASLAEALVLGVKCGLKPETMQEII 209 (301)
T ss_dssp EES---CHHHHHHHHHHHHHHEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred ECC---CHHHHHHHHHHHHHhcCCEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 443 789999999999999999888865 333 335655 34467899988876 99999998887
No 125
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=99.48 E-value=2.6e-13 Score=149.08 Aligned_cols=202 Identities=16% Similarity=0.130 Sum_probs=134.6
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHH-HHH--hhcCceeccCc-cc
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDK-ANN--ALKMLKGVLDY-SE 381 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~--~~~~i~~~~~~-~~ 381 (721)
-+|+|||+|.||.++|..|+++|++|++||+++++++...+.... ..+.| -.+ ... ..+++++++++ ++
T Consensus 9 ~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~----~~epg---l~~~~~~~~~~g~l~~ttd~~ea 81 (446)
T 4a7p_A 9 VRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDARKIELLHQNVMP----IYEPG---LDALVASNVKAGRLSFTTDLAEG 81 (446)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCS----SCCTT---HHHHHHHHHHTTCEEEESCHHHH
T ss_pred eEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCC----ccCCC---HHHHHHhhcccCCEEEECCHHHH
Confidence 379999999999999999999999999999999998875321000 00000 000 000 12568889998 67
Q ss_pred cCCCCEEEEcccCChH---------HHHHHHHHHHhhCCCCeEEEecCCCCCHH---HHhcccC----CCCcEEEecCCC
Q 004972 382 FKDVDMVIEAVIESVP---------LKQKIFSELEKACPPHCILATNTSTIDLN---IVGEKTS----SQDRIIGAHFFS 445 (721)
Q Consensus 382 l~~aDlVIeavpe~~~---------~k~~v~~~l~~~~~~~~ii~s~ts~~~i~---~l~~~~~----~~~r~ig~h~~~ 445 (721)
+++||+||.|||.+.. ..+++++++.++++++++|++. ||+++. ++...+. ...-.+. ++
T Consensus 82 ~~~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~-STv~pgtt~~l~~~l~e~~~~~d~~v~---~~ 157 (446)
T 4a7p_A 82 VKDADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTK-STVPVGTGDEVERIIAEVAPNSGAKVV---SN 157 (446)
T ss_dssp HTTCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEEC-SCCCTTHHHHHHHHHHHHSTTSCCEEE---EC
T ss_pred HhcCCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEe-CCCCchHHHHHHHHHHHhCCCCCceEE---eC
Confidence 8999999999987653 5788889999999999988764 455543 2222211 1111122 23
Q ss_pred CCCCCCee---------EEecCCCCCHHHHHHHHHHHHHcCCe---eEEEcCCC-----chhhhhh---hhHHHHHHHHH
Q 004972 446 PAHVMPLL---------EIVRTERTSAQVILDLMTVGKIIKKV---PVVVGNCT-----GFAVNRA---FFPYSQSARLL 505 (721)
Q Consensus 446 p~~~~~lv---------Eiv~~~~t~~e~~~~~~~l~~~lG~~---~v~v~d~~-----gfi~nRl---~~~~~~Ea~~l 505 (721)
|....+.- -++.|. .++++.+.+.++++.+++. ++++++.. +++.|-+ ..+++||+..+
T Consensus 158 Pe~a~eG~a~~d~~~p~~ivvG~-~~~~~~~~~~~ly~~~~~~~~~~~~~~d~~~aE~~Kl~~N~~~a~~ia~~nE~~~l 236 (446)
T 4a7p_A 158 PEFLREGAAIEDFKRPDRVVVGT-EDEFARQVMREIYRPLSLNQSAPVLFTGRRTSELIKYAANAFLAVKITFINEIADL 236 (446)
T ss_dssp CCCCCTTSHHHHHHSCSCEEEEC-SCHHHHHHHHHHHCSCC-----CEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccchhhhccCCCEEEEeC-CcHHHHHHHHHHHHHHhcCCCeEEEeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33322221 234332 3689999999999999875 57776532 2333443 34568999999
Q ss_pred HHc-CCCHHHHHHHH
Q 004972 506 VSL-GVDVFRIDSAI 519 (721)
Q Consensus 506 ~~~-Gv~~~~ID~a~ 519 (721)
++. |++++++-.++
T Consensus 237 ~~~~GiD~~~v~~~~ 251 (446)
T 4a7p_A 237 CEQVGADVQEVSRGI 251 (446)
T ss_dssp HHHTTCCHHHHHHHH
T ss_pred HHHcCCCHHHHHHHH
Confidence 988 99999999998
No 126
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=99.48 E-value=4.7e-14 Score=151.11 Aligned_cols=174 Identities=10% Similarity=0.042 Sum_probs=120.4
Q ss_pred ceeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cccC
Q 004972 305 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 383 (721)
Q Consensus 305 ~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~ 383 (721)
.+||+|||+|.||.++|..|+++|++|++||+++++++.+.+ .| +..++++ +.++
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~-----------~g-------------~~~~~s~~e~~~ 77 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNVNAVQALER-----------EG-------------IAGARSIEEFCA 77 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHT-----------TT-------------CBCCSSHHHHHH
T ss_pred CCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH-----------CC-------------CEEeCCHHHHHh
Confidence 468999999999999999999999999999999998776421 12 3334455 4456
Q ss_pred CC---CEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHH--HHhcccC-CCCcEEEecCCCCC---CCCCeeE
Q 004972 384 DV---DMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFFSPA---HVMPLLE 454 (721)
Q Consensus 384 ~a---DlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~--~l~~~~~-~~~r~ig~h~~~p~---~~~~lvE 454 (721)
++ |+||+|||.+ ...+++.++.+.++++++|++.+++.+.. .+.+.+. ...+|+....+.++ ..++ .
T Consensus 78 ~a~~~DvVi~~vp~~--~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~vdapVsGg~~~a~~G~--~ 153 (358)
T 4e21_A 78 KLVKPRVVWLMVPAA--VVDSMLQRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQGITYVDVGTSGGIFGLERGY--C 153 (358)
T ss_dssp HSCSSCEEEECSCGG--GHHHHHHHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTTCEEEEEEEECGGGHHHHCC--E
T ss_pred cCCCCCEEEEeCCHH--HHHHHHHHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCCCEEEeCCCCCCHHHHhcCC--e
Confidence 67 9999999966 66778899999999999998877665433 3333332 23345543222211 1112 2
Q ss_pred EecCCCCCHHHHHHHHHHHHHcC--------------------CeeEEEcC-CCchhh---hh-hh---hHHHHHHHHHH
Q 004972 455 IVRTERTSAQVILDLMTVGKIIK--------------------KVPVVVGN-CTGFAV---NR-AF---FPYSQSARLLV 506 (721)
Q Consensus 455 iv~~~~t~~e~~~~~~~l~~~lG--------------------~~~v~v~d-~~gfi~---nR-l~---~~~~~Ea~~l~ 506 (721)
++.+ .++++++.++++++.+| +.++++++ ..|..+ |. +. ...++|++.++
T Consensus 154 im~G--G~~~a~~~~~~ll~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~G~~G~g~~~Kl~~n~l~~~~i~~~aE~~~la 231 (358)
T 4e21_A 154 LMIG--GEKQAVERLDPVFRTLAPGIGAAPRTPGREKREGTAELGYLHCGPSGAGHFVKMVHNGIEYGLMAAYAEGLNIL 231 (358)
T ss_dssp EEEE--SCHHHHHHTHHHHHHHSCCGGGSCCCTTGGGCCSSGGGTEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeec--CCHHHHHHHHHHHHHhccccccCcccccccccccccccceEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4443 27899999999999999 57888876 334333 22 22 23356999999
Q ss_pred Hc
Q 004972 507 SL 508 (721)
Q Consensus 507 ~~ 508 (721)
+.
T Consensus 232 ~~ 233 (358)
T 4e21_A 232 HH 233 (358)
T ss_dssp HT
T ss_pred Hh
Confidence 87
No 127
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=99.47 E-value=7.5e-13 Score=146.22 Aligned_cols=202 Identities=15% Similarity=0.114 Sum_probs=136.6
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHH-HHH--hhcCceeccCcc-c
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDK-ANN--ALKMLKGVLDYS-E 381 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~--~~~~i~~~~~~~-~ 381 (721)
+||+|||+|.||.++|..|+++|++|++||+++++++...+.... ....+ -.+ ... ..+++.++++++ .
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~----i~e~g---l~~~l~~~~~~~~l~~t~d~~ea 75 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIP----IYEPG---LEKMIARNVKAGRLRFGTEIEQA 75 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSC----CCSTT---HHHHHHHHHHTTSEEEESCHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCc----ccCCC---HHHHHHhhcccCcEEEECCHHHH
Confidence 589999999999999999999999999999999998875431000 00000 000 000 135688888884 5
Q ss_pred cCCCCEEEEcccCCh--------HHHHHHHHHHHhhCCCCeEEEecCCCCCHH---HHhcccCC--C-----Cc-EEEec
Q 004972 382 FKDVDMVIEAVIESV--------PLKQKIFSELEKACPPHCILATNTSTIDLN---IVGEKTSS--Q-----DR-IIGAH 442 (721)
Q Consensus 382 l~~aDlVIeavpe~~--------~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~---~l~~~~~~--~-----~r-~ig~h 442 (721)
+++||+||+|||.+. ....++++++.++++++++|++.+ ++++. ++...+.. + .. .+.
T Consensus 76 ~~~aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~S-Tv~pgt~~~l~~~l~~~~~~~~~~~d~~v~-- 152 (450)
T 3gg2_A 76 VPEADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKS-TVPVGSYRLIRKAIQEELDKREVLIDFDIA-- 152 (450)
T ss_dssp GGGCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECS-CCCTTHHHHHHHHHHHHHHHTTCCCCEEEE--
T ss_pred HhcCCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEee-eCCCcchHHHHHHHHHhccccCcCcceeEE--
Confidence 899999999998664 377888899999999999887644 44432 22222210 0 11 111
Q ss_pred CCCCCCCCCee---------EEecCCCCCHHHHHHHHHHHHHcCC--eeEEEcCCC-----chhhhhh---hhHHHHHHH
Q 004972 443 FFSPAHVMPLL---------EIVRTERTSAQVILDLMTVGKIIKK--VPVVVGNCT-----GFAVNRA---FFPYSQSAR 503 (721)
Q Consensus 443 ~~~p~~~~~lv---------Eiv~~~~t~~e~~~~~~~l~~~lG~--~~v~v~d~~-----gfi~nRl---~~~~~~Ea~ 503 (721)
++|....+.. -++.|. .++++.+.+.++++.+++ .++++++.. +++.|-+ ..+++||+.
T Consensus 153 -~~Pe~a~eG~~~~~~~~p~~ivvG~-~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~aE~~Kl~~N~~~a~~ia~~nE~~ 230 (450)
T 3gg2_A 153 -SNPEFLKEGNAIDDFMKPDRVVVGV-DSDRARELITSLYKPMLLNNFRVLFMDIASAEMTKYAANAMLATRISFMNDVA 230 (450)
T ss_dssp -ECCCCCCTTSHHHHHHSCSCEEEEE-SSHHHHHHHHHHHTTTCCSCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -echhhhcccchhhhccCCCEEEEEc-CCHHHHHHHHHHHHHHhcCCCeEEecCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2344333322 134332 368999999999999987 366666533 3455553 356689999
Q ss_pred HHHHc-CCCHHHHHHHH
Q 004972 504 LLVSL-GVDVFRIDSAI 519 (721)
Q Consensus 504 ~l~~~-Gv~~~~ID~a~ 519 (721)
.+++. |++++++-.++
T Consensus 231 ~l~~~~Gid~~~v~~~~ 247 (450)
T 3gg2_A 231 NLCERVGADVSMVRLGI 247 (450)
T ss_dssp HHHHHHTCCHHHHHHHH
T ss_pred HHHHHhCCCHHHHHHHH
Confidence 99988 99999999998
No 128
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=99.47 E-value=1.5e-13 Score=153.07 Aligned_cols=202 Identities=16% Similarity=0.167 Sum_probs=139.1
Q ss_pred ceeEEEEcCCCCcHHHHHHHHHC--CCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCC--HHHHHHh-----hcCcee
Q 004972 305 VRKVAVIGGGLMGSGIATAHILN--NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT--QDKANNA-----LKMLKG 375 (721)
Q Consensus 305 ~~kI~VIG~G~mG~~iA~~la~~--G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~-----~~~i~~ 375 (721)
|+||+|||+|.||.++|..|+++ |++|++||+++++++...+ +... ....+.. ..++.+
T Consensus 5 ~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~------------g~~~i~e~~l~~~~~~~~~~~~~~ 72 (467)
T 2q3e_A 5 IKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNS------------PTLPIYEPGLKEVVESCRGKNLFF 72 (467)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTS------------SSCSSCCTTHHHHHHHHBTTTEEE
T ss_pred ccEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhC------------CCCCcCCCCHHHHHHHhhcCCEEE
Confidence 56999999999999999999998 8999999999998776421 1110 0000001 135777
Q ss_pred ccCc-cccCCCCEEEEcccCChHH-------------HHHHHHHHHhhCCCCeEEEecCCCCCHH---HHhcccCCC-Cc
Q 004972 376 VLDY-SEFKDVDMVIEAVIESVPL-------------KQKIFSELEKACPPHCILATNTSTIDLN---IVGEKTSSQ-DR 437 (721)
Q Consensus 376 ~~~~-~~l~~aDlVIeavpe~~~~-------------k~~v~~~l~~~~~~~~ii~s~ts~~~i~---~l~~~~~~~-~r 437 (721)
++++ +.+++||+||+|||++... ...+.+++.++++++++|+. +|+.++. ++...+... ..
T Consensus 73 t~~~~e~~~~aDvViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~-~STv~~g~~~~l~~~l~~~~~~ 151 (467)
T 2q3e_A 73 STNIDDAIKEADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTE-KSTVPVRAAESIRRIFDANTKP 151 (467)
T ss_dssp ESCHHHHHHHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEE-CSCCCTTHHHHHHHHHHHTCCT
T ss_pred ECCHHHHHhcCCEEEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEE-CCcCCchHHHHHHHHHHHhCCC
Confidence 7776 5678999999999865532 46777888888899988864 3344432 233333211 11
Q ss_pred EEEec-CCCCCCCCCeeE---------E-ecCCC--CCHHHHHHHHHHHHHc-CCeeEEEcC-----CCchhhhhh---h
Q 004972 438 IIGAH-FFSPAHVMPLLE---------I-VRTER--TSAQVILDLMTVGKII-KKVPVVVGN-----CTGFAVNRA---F 495 (721)
Q Consensus 438 ~ig~h-~~~p~~~~~lvE---------i-v~~~~--t~~e~~~~~~~l~~~l-G~~~v~v~d-----~~gfi~nRl---~ 495 (721)
.+..+ .++|....+... + +.++. +++++.+.+.++++.+ |+.++++++ ..+++.|.+ .
T Consensus 152 ~~d~~V~~~Pe~~~~G~~~~d~~~~~rivvGg~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~ae~~Kl~~N~~~a~~ 231 (467)
T 2q3e_A 152 NLNLQVLSNPEFLAEGTAIKDLKNPDRVLIGGDETPEGQRAVQALCAVYEHWVPREKILTTNTWSSELSKLAANAFLAQR 231 (467)
T ss_dssp TCEEEEEECCCCCCTTSHHHHHHSCSCEEEECCSSHHHHHHHHHHHHHHTTTSCGGGEEEECHHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEeCHHHhhcccchhhccCCCEEEECCCCCCCCHHHHHHHHHHHHHhccCCeEEecCHHHHHHHHHHHHHHHHHH
Confidence 11111 245555554432 3 34433 3788999999999998 778888765 346777876 3
Q ss_pred hHHHHHHHHHHHc-CCCHHHHHHHH
Q 004972 496 FPYSQSARLLVSL-GVDVFRIDSAI 519 (721)
Q Consensus 496 ~~~~~Ea~~l~~~-Gv~~~~ID~a~ 519 (721)
.+++||+..+++. |++++++..++
T Consensus 232 ia~~nE~~~l~~~~Gid~~~v~~~~ 256 (467)
T 2q3e_A 232 ISSINSISALCEATGADVEEVATAI 256 (467)
T ss_dssp HHHHHHHHHHHHHHTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcCHHHHHHHH
Confidence 6778999999988 99999999998
No 129
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=99.47 E-value=4.6e-13 Score=145.76 Aligned_cols=196 Identities=16% Similarity=0.190 Sum_probs=133.3
Q ss_pred CceeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHh----hcCceeccCc
Q 004972 304 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA----LKMLKGVLDY 379 (721)
Q Consensus 304 ~~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~----~~~i~~~~~~ 379 (721)
.++||+|||+|.||.++|..|++ |++|++||+++++++.+.+.. ..+.....+.. ..++.+++++
T Consensus 35 ~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~~v~~l~~g~----------~~i~e~~l~~ll~~~~~~l~~ttd~ 103 (432)
T 3pid_A 35 EFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQAKVDMLNQKI----------SPIVDKEIQEYLAEKPLNFRATTDK 103 (432)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHHHHHHHHTTC----------CSSCCHHHHHHHHHSCCCEEEESCH
T ss_pred CCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHHHhhHHhccC----------CccccccHHHHHhhccCCeEEEcCH
Confidence 46799999999999999999998 999999999999988764310 01111111111 2368888887
Q ss_pred -cccCCCCEEEEcccCCh---------HHHHHHHHHHHhhCCCCeEEEecCCCCCHH---HHhcccCCCCcEEEecCCCC
Q 004972 380 -SEFKDVDMVIEAVIESV---------PLKQKIFSELEKACPPHCILATNTSTIDLN---IVGEKTSSQDRIIGAHFFSP 446 (721)
Q Consensus 380 -~~l~~aDlVIeavpe~~---------~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~---~l~~~~~~~~r~ig~h~~~p 446 (721)
+++++||+||+|||++. .....+.+++.+ ++++++|+. .|++++. ++...+.. ..+ . ++|
T Consensus 104 ~ea~~~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~-~STv~pgtt~~l~~~l~~--~~v--~-~sP 176 (432)
T 3pid_A 104 HDAYRNADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMII-KSTIPVGFTRDIKERLGI--DNV--I-FSP 176 (432)
T ss_dssp HHHHTTCSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEE-CSCCCTTHHHHHHHHHTC--CCE--E-ECC
T ss_pred HHHHhCCCEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEE-eCCCChHHHHHHHHHHhh--ccE--e-ecC
Confidence 67899999999999864 356777888888 888888874 5555543 44443322 222 2 266
Q ss_pred CCCCCee---------EEecCCCCCHHHHHHHHHHHHH--cCC-eeEEEcCC-----Cchhhhhh---hhHHHHHHHHHH
Q 004972 447 AHVMPLL---------EIVRTERTSAQVILDLMTVGKI--IKK-VPVVVGNC-----TGFAVNRA---FFPYSQSARLLV 506 (721)
Q Consensus 447 ~~~~~lv---------Eiv~~~~t~~e~~~~~~~l~~~--lG~-~~v~v~d~-----~gfi~nRl---~~~~~~Ea~~l~ 506 (721)
....+.- .|+.|. +++..+.+.+++.. ++. .++++.+. ..++.|-+ ..+++||+..++
T Consensus 177 e~~~~G~A~~~~l~p~rIvvG~--~~~~~~~~~~ll~~~~~~~~~~v~~~~~~~AE~~Kl~~N~~~a~~Ia~~nEl~~la 254 (432)
T 3pid_A 177 EFLREGRALYDNLHPSRIVIGE--RSARAERFADLLKEGAIKQDIPTLFTDSTEAEAIKLFANTYLALRVAYFNELDSYA 254 (432)
T ss_dssp CCCCTTSHHHHHHSCSCEEESS--CSHHHHHHHHHHHHHCSSSSCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCcchhhhcccCCceEEecC--CHHHHHHHHHHHHhhhccCCCeEEecCccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6554431 244443 45677888999986 553 35665541 12344443 256789999999
Q ss_pred Hc-CCCHHHHHHHH
Q 004972 507 SL-GVDVFRIDSAI 519 (721)
Q Consensus 507 ~~-Gv~~~~ID~a~ 519 (721)
+. |+++.++-.++
T Consensus 255 e~~GiD~~~v~~~~ 268 (432)
T 3pid_A 255 ESQGLNSKQIIEGV 268 (432)
T ss_dssp HHTTCCHHHHHHHH
T ss_pred HHcCCCHHHHHHHH
Confidence 88 99999998888
No 130
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=99.47 E-value=9.6e-13 Score=136.66 Aligned_cols=155 Identities=17% Similarity=0.172 Sum_probs=115.9
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCccccCCC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 385 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~a 385 (721)
+||+|||+|.||+++|..|.+.|++|++||++++.++.+. +.|.. ...+++++.+.+|
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~-----------~~g~~-----------~~~~~~~~~~~~~ 58 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAV-----------ERQLV-----------DEAGQDLSLLQTA 58 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-----------HTTSC-----------SEEESCGGGGTTC
T ss_pred CEEEEEcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----------hCCCC-----------ccccCCHHHhCCC
Confidence 3799999999999999999999999999999998876542 11210 1234455333899
Q ss_pred CEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhcccCCCCcEEEecCCCCCC------------CCCee
Q 004972 386 DMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAH------------VMPLL 453 (721)
Q Consensus 386 DlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~~l~~~~~~~~r~ig~h~~~p~~------------~~~lv 453 (721)
|+||+|+| .....+++.++.+.++++++|++. ++.....+........++++.||..... .++.+
T Consensus 59 D~vi~av~--~~~~~~~~~~l~~~~~~~~~vv~~-~~~~~~~~~~~~~~~~~~~~~~p~~g~~~~gp~~a~~~~~~g~~~ 135 (279)
T 2f1k_A 59 KIIFLCTP--IQLILPTLEKLIPHLSPTAIVTDV-ASVKTAIAEPASQLWSGFIGGHPMAGTAAQGIDGAEENLFVNAPY 135 (279)
T ss_dssp SEEEECSC--HHHHHHHHHHHGGGSCTTCEEEEC-CSCCHHHHHHHHHHSTTCEEEEECCCCSCSSGGGCCTTTTTTCEE
T ss_pred CEEEEECC--HHHHHHHHHHHHhhCCCCCEEEEC-CCCcHHHHHHHHHHhCCEeecCcccCCccCCHHHHhHHHhCCCcE
Confidence 99999999 667888999999999999988765 4444433332222223899999875221 23356
Q ss_pred EEecCCCCCHHHHHHHHHHHHHcCCeeEEEcC
Q 004972 454 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 485 (721)
Q Consensus 454 Eiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d 485 (721)
.++++..++++..+.+.++++.+|..++++.+
T Consensus 136 ~~~~~~~~~~~~~~~v~~l~~~~g~~~~~~~~ 167 (279)
T 2f1k_A 136 VLTPTEYTDPEQLACLRSVLEPLGVKIYLCTP 167 (279)
T ss_dssp EEEECTTCCHHHHHHHHHHHGGGTCEEEECCH
T ss_pred EEecCCCCCHHHHHHHHHHHHHcCCEEEEcCH
Confidence 77787778999999999999999999988865
No 131
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=99.46 E-value=6.6e-14 Score=146.76 Aligned_cols=182 Identities=18% Similarity=0.133 Sum_probs=125.8
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cccCC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 384 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 384 (721)
+||+|||+|.||.++|..|++.|++|++||+++++++...+ .| +..+++. +.+++
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~-----------~g-------------~~~~~~~~~~~~~ 56 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQD-----------AG-------------EQVVSSPADVAEK 56 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHTTCCEEEECSSTHHHHHHHT-----------TT-------------CEECSSHHHHHHH
T ss_pred CeEEEEeccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----------cC-------------CeecCCHHHHHhc
Confidence 37999999999999999999999999999999988765421 11 3444555 45788
Q ss_pred CCEEEEcccCChHHHHHHHHH---HHhhCCCCeEEEecCCCCCHHHHhcc---cCCCCcEEEecCCCCC-CCC------C
Q 004972 385 VDMVIEAVIESVPLKQKIFSE---LEKACPPHCILATNTSTIDLNIVGEK---TSSQDRIIGAHFFSPA-HVM------P 451 (721)
Q Consensus 385 aDlVIeavpe~~~~k~~v~~~---l~~~~~~~~ii~s~ts~~~i~~l~~~---~~~~~r~ig~h~~~p~-~~~------~ 451 (721)
+|+||+|+|.+... +.++.+ +.+.++++++|++ ++++.+...... +... +.+|.+.| ..+ +
T Consensus 57 ~Dvvi~~vp~~~~~-~~v~~~~~~~~~~l~~~~~vv~-~s~~~~~~~~~~~~~~~~~----g~~~~~~p~~~g~~~a~~~ 130 (296)
T 2gf2_A 57 ADRIITMLPTSINA-IEAYSGANGILKKVKKGSLLID-SSTIDPAVSKELAKEVEKM----GAVFMDAPVSGGVGAARSG 130 (296)
T ss_dssp CSEEEECCSSHHHH-HHHHHSTTSGGGTCCTTCEEEE-CSCCCHHHHHHHHHHHHHT----TCEEEECCEESHHHHHHHT
T ss_pred CCEEEEeCCCHHHH-HHHHhCchhHHhcCCCCCEEEE-CCCCCHHHHHHHHHHHHHc----CCEEEEcCCCCChhHHhcC
Confidence 99999999855444 445554 3346678888888 788877644322 2211 22333322 111 1
Q ss_pred eeEEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCC-ch---hhhhhhh----HHHHHHHHHHHc-CCCHHHHHHHH
Q 004972 452 LLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT-GF---AVNRAFF----PYSQSARLLVSL-GVDVFRIDSAI 519 (721)
Q Consensus 452 lvEiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~~-gf---i~nRl~~----~~~~Ea~~l~~~-Gv~~~~ID~a~ 519 (721)
.+.++.+ .+++.++.+.++++.+|..++++++.. |. ++|+.+. .+++|++.+.+. |+++++++.++
T Consensus 131 ~~~~~~~--~~~~~~~~v~~l~~~~g~~~~~~~~~g~~~~~kl~~n~~~~~~~~~~~Ea~~~~~~~G~~~~~~~~~~ 205 (296)
T 2gf2_A 131 NLTFMVG--GVEDEFAAAQELLGCMGSNVVYCGAVGTGQAAKICNNMLLAISMIGTAEAMNLGIRLGLDPKLLAKIL 205 (296)
T ss_dssp CEEEEEE--SCGGGHHHHHHHHTTTEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred cEEEEeC--CCHHHHHHHHHHHHHHcCCeEEeCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 2334444 368889999999999999998886621 21 3344442 468899998876 99999999988
No 132
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=99.46 E-value=7.1e-13 Score=137.80 Aligned_cols=155 Identities=15% Similarity=0.160 Sum_probs=116.9
Q ss_pred ceeEEEEcCCCCcHHHHHHHHHCCC--ceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cc
Q 004972 305 VRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SE 381 (721)
Q Consensus 305 ~~kI~VIG~G~mG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~ 381 (721)
|+||+|||+|.||.++|..|++.|+ +|++||++++.++.+. +.|.. ...+++. +.
T Consensus 1 m~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~-----------~~g~~-----------~~~~~~~~~~ 58 (281)
T 2g5c_A 1 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV-----------DLGII-----------DEGTTSIAKV 58 (281)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH-----------HTTSC-----------SEEESCGGGG
T ss_pred CcEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHH-----------HCCCc-----------ccccCCHHHH
Confidence 4689999999999999999999999 9999999998876542 11211 1123445 56
Q ss_pred cC-CCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCC--HHHHhcccCCCCcEEEecCCCCCC----------
Q 004972 382 FK-DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID--LNIVGEKTSSQDRIIGAHFFSPAH---------- 448 (721)
Q Consensus 382 l~-~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~--i~~l~~~~~~~~r~ig~h~~~p~~---------- 448 (721)
++ +||+||+||| .....+++.++.+.++++++|++.+++.. ...+.+.+.. ++++.||+..+.
T Consensus 59 ~~~~aDvVilavp--~~~~~~v~~~l~~~l~~~~iv~~~~~~~~~~~~~l~~~l~~--~~v~~~p~~~~~~~gp~~a~~~ 134 (281)
T 2g5c_A 59 EDFSPDFVMLSSP--VRTFREIAKKLSYILSEDATVTDQGSVKGKLVYDLENILGK--RFVGGHPIAGTEKSGVEYSLDN 134 (281)
T ss_dssp GGTCCSEEEECSC--HHHHHHHHHHHHHHSCTTCEEEECCSCCTHHHHHHHHHHGG--GEECEEEECCCSCCSGGGCCSS
T ss_pred hcCCCCEEEEcCC--HHHHHHHHHHHHhhCCCCcEEEECCCCcHHHHHHHHHhccc--cceeeccccCCccCChhhhhhH
Confidence 78 9999999999 66677888899888999988876444332 2344444432 488888865432
Q ss_pred --CCCeeEEecCCCCCHHHHHHHHHHHHHcCCeeEEEcC
Q 004972 449 --VMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 485 (721)
Q Consensus 449 --~~~lvEiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d 485 (721)
.+..+.++++..++++.++.+.++++.+|..++++++
T Consensus 135 l~~g~~~~~~~~~~~~~~~~~~v~~l~~~~g~~~~~~~~ 173 (281)
T 2g5c_A 135 LYEGKKVILTPTKKTDKKRLKLVKRVWEDVGGVVEYMSP 173 (281)
T ss_dssp TTTTCEEEECCCSSSCHHHHHHHHHHHHHTTCEEEECCH
T ss_pred HhCCCCEEEecCCCCCHHHHHHHHHHHHHcCCEEEEcCH
Confidence 3445777888788999999999999999999888865
No 133
>2f9y_B Acetyl-coenzyme A carboxylase carboxyl transferas beta; zinc ribbon, crotonase superfamily, spiral domain, ligase; 3.20A {Escherichia coli} SCOP: c.14.1.4
Probab=99.46 E-value=1.2e-13 Score=143.41 Aligned_cols=157 Identities=17% Similarity=0.160 Sum_probs=123.5
Q ss_pred EEEEEeCCC-CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccCCCcccccchHHHHHHHHH
Q 004972 15 VAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNL 93 (721)
Q Consensus 15 v~~i~l~~p-~~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (721)
|+++..+.. ..|+++..+.+.+.++++.+.++ .+.+|+|++.| |+|+.+.... + ..+..++ ..
T Consensus 120 V~v~a~d~~~~ggslg~~~~~Ki~r~~e~A~~~-~~PvI~l~~sG-----Garlqeg~~~--------l-~~~~~i~-~a 183 (304)
T 2f9y_B 120 VVAAAFEFAFMGGSMGSVVGARFVRAVEQALED-NCPLICFSASG-----GARMQEALMS--------L-MQMAKTS-AA 183 (304)
T ss_dssp CBEEEECTTSTTTCBCTHHHHHHHHHHHHHHHH-TCCEEEEEEES-----SBCGGGTHHH--------H-HHHHHHH-HH
T ss_pred EEEEEEcCccccCCCCHHHHHHHHHHHHHHHhC-CCCEEEEECCC-----CcCHHHHHHH--------H-HHHHHHH-HH
Confidence 444444444 35999999999999999999987 89999999876 8888654310 1 1222333 33
Q ss_pred H---hhCCCcEEEEECCcccccc-hHhhhhcCEEEeeCCceEeCcccccCccccccccccccCHHHHHHHHHcCCCcCHH
Q 004972 94 I---EDCKKPIVAAVEGLALGGG-LELAMGCHARIAAPKTQLGLPELTLGVIPGTQRLPRLVGLSKAIEMMLLSKSITSE 169 (721)
Q Consensus 94 l---~~~~~p~Iaav~G~a~GgG-~~lalacD~ria~~~a~~~~pe~~~Gl~P~~~~l~r~~G~~~a~~l~ltg~~~~a~ 169 (721)
+ ...++|+|++|+|.|+||| +.++++||++||.++|+|++. |...+++.+|.. ++++..+|+
T Consensus 184 l~~~~~~~vP~IavV~G~~~GGg~a~~a~~~D~via~~~A~i~v~--------Gp~~i~~~ig~~------l~~~~~~Ae 249 (304)
T 2f9y_B 184 LAKMQERGLPYISVLTDPTMGGVSASFAMLGDLNIAEPKALIGFA--------GPRVIEQTVREK------LPPGFQRSE 249 (304)
T ss_dssp HHHHHHTTCCEEEEEEEEEEHHHHTTGGGCCSEEEECTTCBEESS--------CHHHHHHHHTSC------CCTTTTBHH
T ss_pred HHHHhcCCCCEEEEEECCCccHHHHHHHhcCCEEEEeCCcEEEee--------cHHHHHHHhCcc------CCcccCCHH
Confidence 4 4459999999999999999 788999999999999999987 334445555542 468889999
Q ss_pred HHHHcCCccEEcCCchHHHHHHHHHHHHHhcC
Q 004972 170 EGWKLGLIDAVVTSEELLKVSRLWALDIAARR 201 (721)
Q Consensus 170 eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~ 201 (721)
++.++|+||.|++++++.+.+.+++..++..+
T Consensus 250 ~~~~~Glvd~Vv~~~el~~~l~~ll~~l~~~~ 281 (304)
T 2f9y_B 250 FLIEKGAIDMIVRRPEMRLKLASILAKLMNLP 281 (304)
T ss_dssp HHGGGTCCSEECCHHHHHHHHHHHHHHHTTCC
T ss_pred HHHhcCCccEEeCcHHHHHHHHHHHHHhhcCC
Confidence 99999999999999999999999999987653
No 134
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=99.46 E-value=2.2e-13 Score=150.65 Aligned_cols=201 Identities=14% Similarity=0.077 Sum_probs=134.0
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHh------hcCceeccCc
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA------LKMLKGVLDY 379 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~------~~~i~~~~~~ 379 (721)
+||+|||+|.||.++|..|+++|++|++||+++++++...+.. -.+.....+.. .+++.+++++
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~~~----------~~i~e~~l~~~~~~~~~~g~l~~t~~~ 70 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGK----------SPIVEPGLEALLQQGRQTGRLSGTTDF 70 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTC----------CSSCCTTHHHHHHHHHHTTCEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHhCCC----------CCcCCCCHHHHHHhhcccCceEEeCCH
Confidence 3899999999999999999999999999999999887653210 00000000100 2457788887
Q ss_pred -cccCCCCEEEEcccCChH--------HHHHHHHHHHhhCCC---CeEEEecCCCCCHHH----HhcccCC--CCcE-EE
Q 004972 380 -SEFKDVDMVIEAVIESVP--------LKQKIFSELEKACPP---HCILATNTSTIDLNI----VGEKTSS--QDRI-IG 440 (721)
Q Consensus 380 -~~l~~aDlVIeavpe~~~--------~k~~v~~~l~~~~~~---~~ii~s~ts~~~i~~----l~~~~~~--~~r~-ig 440 (721)
+.+++||+||+|||.+.. ...++++++.+++++ +++|+.. |+.++.. +...+.. ..++ +.
T Consensus 71 ~~~~~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~~~~iVV~~-Stv~~g~t~~~l~~~l~~~~g~~~~~~ 149 (436)
T 1mv8_A 71 KKAVLDSDVSFICVGTPSKKNGDLDLGYIETVCREIGFAIREKSERHTVVVR-STVLPGTVNNVVIPLIEDCSGKKAGVD 149 (436)
T ss_dssp HHHHHTCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHTTCCSCCEEEEC-SCCCTTHHHHTHHHHHHHHHSCCBTTT
T ss_pred HHHhccCCEEEEEcCCCcccCCCcchHHHHHHHHHHHHHhcccCCCcEEEEe-CCcCCCchHHHHHHHHHHhcCcccCCc
Confidence 468999999999986553 255677889988888 8887643 3433322 2222211 1111 00
Q ss_pred ec-CCCCCCCCCee---------EEecCCCCCHHHHHHHHHHHHHcCCeeEEEcC-----CCchhhhhhh---hHHHHHH
Q 004972 441 AH-FFSPAHVMPLL---------EIVRTERTSAQVILDLMTVGKIIKKVPVVVGN-----CTGFAVNRAF---FPYSQSA 502 (721)
Q Consensus 441 ~h-~~~p~~~~~lv---------Eiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d-----~~gfi~nRl~---~~~~~Ea 502 (721)
.+ .++|....+.. .++.|. ++++..+.+.++++.+|.. +++.+ ..+++.|.+. .+++||+
T Consensus 150 ~~v~~~Pe~~~~G~~~~~~~~~~~iv~G~-~~~~~~~~~~~l~~~~~~~-v~~~~~~~ae~~Kl~~N~~~a~~ia~~nE~ 227 (436)
T 1mv8_A 150 FGVGTNPEFLRESTAIKDYDFPPMTVIGE-LDKQTGDLLEEIYRELDAP-IIRKTVEVAEMIKYTCNVWHAAKVTFANEI 227 (436)
T ss_dssp BEEEECCCCCCTTSHHHHHHSCSCEEEEE-SSHHHHHHHHHHHTTSSSC-EEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEECcccccccccchhccCCCEEEEEc-CCHHHHHHHHHHHhccCCC-EEcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 13455444432 244443 3689999999999999984 44444 3346667653 5788999
Q ss_pred HHHHHc-CCCHHHHHHHH
Q 004972 503 RLLVSL-GVDVFRIDSAI 519 (721)
Q Consensus 503 ~~l~~~-Gv~~~~ID~a~ 519 (721)
..+++. |++++++..++
T Consensus 228 ~~l~~~~Gid~~~v~~~~ 245 (436)
T 1mv8_A 228 GNIAKAVGVDGREVMDVI 245 (436)
T ss_dssp HHHHHHTTSCHHHHHHHH
T ss_pred HHHHHHhCCCHHHHHHHh
Confidence 999987 99999999998
No 135
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=99.46 E-value=3.3e-13 Score=141.67 Aligned_cols=188 Identities=18% Similarity=0.204 Sum_probs=128.4
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cccCC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 384 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 384 (721)
+||+|||+|.||..+|..|++.|++|++||++++.++...+ .| +..++++ +.+++
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~-----------~g-------------~~~~~~~~~~~~~ 61 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIA-----------AG-------------AETASTAKAIAEQ 61 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-----------TT-------------CEECSSHHHHHHH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH-----------CC-------------CeecCCHHHHHhC
Confidence 48999999999999999999999999999999988765421 12 3334555 45788
Q ss_pred CCEEEEcccCChHHHHHHH--HHHHhhCCCCeEEEecCCCCCH--HHHhcccCC-CCcEEEecCC-CCC-CCCCeeEEec
Q 004972 385 VDMVIEAVIESVPLKQKIF--SELEKACPPHCILATNTSTIDL--NIVGEKTSS-QDRIIGAHFF-SPA-HVMPLLEIVR 457 (721)
Q Consensus 385 aDlVIeavpe~~~~k~~v~--~~l~~~~~~~~ii~s~ts~~~i--~~l~~~~~~-~~r~ig~h~~-~p~-~~~~lvEiv~ 457 (721)
+|+||+|+|.+..+...++ +++.+.++++++|++.+++.+. ..+.+.+.. ...++....+ +|+ .....+.++.
T Consensus 62 ~D~vi~~v~~~~~~~~~~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~~~pv~~~~~~~~~~~~~~~~ 141 (299)
T 1vpd_A 62 CDVIITMLPNSPHVKEVALGENGIIEGAKPGTVLIDMSSIAPLASREISDALKAKGVEMLDAPVSGGEPKAIDGTLSVMV 141 (299)
T ss_dssp CSEEEECCSSHHHHHHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHTTTCEEEECCEESHHHHHHHTCEEEEE
T ss_pred CCEEEEECCCHHHHHHHHhCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEEecCCCCHhHHhcCCEEEEe
Confidence 9999999996555444333 5677888999988876655442 355554432 2233332111 000 0111234444
Q ss_pred CCCCCHHHHHHHHHHHHHcCCeeEEEcC-CCchh---hhhhhh----HHHHHHHHHHHc-CCCHHHHHHHH
Q 004972 458 TERTSAQVILDLMTVGKIIKKVPVVVGN-CTGFA---VNRAFF----PYSQSARLLVSL-GVDVFRIDSAI 519 (721)
Q Consensus 458 ~~~t~~e~~~~~~~l~~~lG~~~v~v~d-~~gfi---~nRl~~----~~~~Ea~~l~~~-Gv~~~~ID~a~ 519 (721)
+. +++.++.+.++++.+|..++++++ ..|.. +|+.+. ..++|++.+.+. |+++++++.++
T Consensus 142 ~~--~~~~~~~~~~ll~~~g~~~~~~~~~~~~~~~Kl~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~ 210 (299)
T 1vpd_A 142 GG--DKAIFDKYYDLMKAMAGSVVHTGDIGAGNVTKLANQVIVALNIAAMSEALTLATKAGVNPDLVYQAI 210 (299)
T ss_dssp ES--CHHHHHHHHHHHHTTEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred CC--CHHHHHHHHHHHHHHcCCeEEeCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 43 789999999999999999988864 33432 244333 467899988776 99999999887
No 136
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=99.46 E-value=5.7e-13 Score=142.75 Aligned_cols=173 Identities=12% Similarity=0.035 Sum_probs=117.5
Q ss_pred CCCCceeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-
Q 004972 301 KPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY- 379 (721)
Q Consensus 301 ~~~~~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~- 379 (721)
|.+.++||+|||+|.||+++|..|+++|++|++||++++.++...+...+ ..+...-. ...++.+++++
T Consensus 25 m~~~~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~--~~~l~g~~--------l~~~i~~t~d~~ 94 (356)
T 3k96_A 25 MEPFKHPIAILGAGSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVN--NRYLPNYP--------FPETLKAYCDLK 94 (356)
T ss_dssp --CCCSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSB--TTTBTTCC--------CCTTEEEESCHH
T ss_pred ccccCCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCC--cccCCCCc--------cCCCeEEECCHH
Confidence 33445789999999999999999999999999999999987765432100 00000000 12357777787
Q ss_pred cccCCCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHH------HHhcccCCCCcEE-EecCCCCC---CC
Q 004972 380 SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN------IVGEKTSSQDRII-GAHFFSPA---HV 449 (721)
Q Consensus 380 ~~l~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~------~l~~~~~~~~r~i-g~h~~~p~---~~ 449 (721)
+++++||+||+||| ....+++++++.++++++++|++.++++... .+.+.++. ..+. -.-|.... ..
T Consensus 95 ea~~~aDvVilaVp--~~~~~~vl~~i~~~l~~~~ivvs~~kGi~~~t~~~se~i~~~l~~-~~~~vlsgP~~a~ev~~g 171 (356)
T 3k96_A 95 ASLEGVTDILIVVP--SFAFHEVITRMKPLIDAKTRIAWGTKGLAKGSRLLHEVVATELGQ-VPMAVISGPSLATEVAAN 171 (356)
T ss_dssp HHHTTCCEEEECCC--HHHHHHHHHHHGGGCCTTCEEEECCCSCBTTTBCHHHHHHHHHCS-CCEEEEESSCCHHHHHTT
T ss_pred HHHhcCCEEEECCC--HHHHHHHHHHHHHhcCCCCEEEEEeCCCCcCccCHHHHHHHHcCC-CCEEEEECccHHHHHHcC
Confidence 57899999999999 7788999999999999999999988877764 23333331 1211 11111110 11
Q ss_pred CCeeEEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCc
Q 004972 450 MPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488 (721)
Q Consensus 450 ~~lvEiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~~g 488 (721)
.+..-++.+ .+++..+.+.+++...+.++.+..|..|
T Consensus 172 ~pt~~via~--~~~~~~~~v~~lf~~~~~rv~~~~Di~g 208 (356)
T 3k96_A 172 LPTAVSLAS--NNSQFSKDLIERLHGQRFRVYKNDDMIG 208 (356)
T ss_dssp CCEEEEEEE--SCHHHHHHHHHHHCCSSEEEEEESCHHH
T ss_pred CCeEEEEec--CCHHHHHHHHHHhCCCCeeEEEeCCHHH
Confidence 122222222 4789999999999999998888877554
No 137
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=99.45 E-value=4.1e-13 Score=149.93 Aligned_cols=201 Identities=14% Similarity=0.162 Sum_probs=136.0
Q ss_pred CCceeEEEEcCCCCcHHHHHHHHHC--CCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCC--HHHHHHh-----hcCc
Q 004972 303 RGVRKVAVIGGGLMGSGIATAHILN--NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT--QDKANNA-----LKML 373 (721)
Q Consensus 303 ~~~~kI~VIG~G~mG~~iA~~la~~--G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~-----~~~i 373 (721)
++++||+|||+|.||.++|..|+++ |++|++||+++++++...+ +... ....+.. ..++
T Consensus 7 ~~~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~------------g~~~i~e~gl~~~~~~~~~~~l 74 (481)
T 2o3j_A 7 GKVSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNS------------DKLPIYEPGLDEIVFAARGRNL 74 (481)
T ss_dssp CCCCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTS------------SSCSSCCTTHHHHHHHHBTTTE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHC------------CCCCcCCCCHHHHHHHhhcCCE
Confidence 3467999999999999999999998 7999999999999876531 1110 0000111 1357
Q ss_pred eeccCc-cccCCCCEEEEcccCCh-------------HHHHHHHHHHHhhCCCCeEEEecCCCCCHH---HHhcccCC--
Q 004972 374 KGVLDY-SEFKDVDMVIEAVIESV-------------PLKQKIFSELEKACPPHCILATNTSTIDLN---IVGEKTSS-- 434 (721)
Q Consensus 374 ~~~~~~-~~l~~aDlVIeavpe~~-------------~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~---~l~~~~~~-- 434 (721)
.+++++ +.+++||+||+|||... ....++++++.++++++++|+. .|++++. .+...+..
T Consensus 75 ~~t~~~~~~~~~aDvvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~-~STv~~gt~~~l~~~l~~~~ 153 (481)
T 2o3j_A 75 FFSSDIPKAIAEADLIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKIVVE-KSTVPVKAAESIGCILREAQ 153 (481)
T ss_dssp EEESCHHHHHHHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCSCEEEEE-CSCCCTTHHHHHHHHHHHHT
T ss_pred EEECCHHHHhhcCCEEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCCCCEEEE-CCCCCCCHHHHHHHHHHHhh
Confidence 778886 66899999999998654 2577888999999999998875 3344432 23222211
Q ss_pred C----C-cEEEecCCCCCCCCCee---------EEe-cCCCC--CHHHHHHHHHHHHHcCC-eeEEEcC-----CCchhh
Q 004972 435 Q----D-RIIGAHFFSPAHVMPLL---------EIV-RTERT--SAQVILDLMTVGKIIKK-VPVVVGN-----CTGFAV 491 (721)
Q Consensus 435 ~----~-r~ig~h~~~p~~~~~lv---------Eiv-~~~~t--~~e~~~~~~~l~~~lG~-~~v~v~d-----~~gfi~ 491 (721)
. . -.+..+ |....+.. .++ .+... ++++++.+.++++.+++ .++++.+ ...++.
T Consensus 154 ~~~~~~d~~v~~~---Pe~~~~G~a~~~~~~~~~iviG~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~d~~~ae~~Kl~~ 230 (481)
T 2o3j_A 154 KNNENLKFQVLSN---PEFLAEGTAMKDLANPDRVLIGGESSPEGLQAVAELVRIYENWVPRNRIITTNTWSSELSKLVA 230 (481)
T ss_dssp C----CCEEEEEC---CCCCCTTCHHHHHHSCSCEEEEECSSHHHHHHHHHHHHHHHTTSCGGGEEEEEHHHHHHHHHHH
T ss_pred CcCcCCceEEEeC---cccccccchhhcccCCCEEEEEecCchhhHHHHHHHHHHHHhhcCCCeEEecCHHHHHHHHHHH
Confidence 1 1 123333 33332221 244 33321 23688999999999996 7777754 334666
Q ss_pred hhh---hhHHHHHHHHHHHc-CCCHHHHHHHH
Q 004972 492 NRA---FFPYSQSARLLVSL-GVDVFRIDSAI 519 (721)
Q Consensus 492 nRl---~~~~~~Ea~~l~~~-Gv~~~~ID~a~ 519 (721)
|-+ ..+++||+..+++. |++++++..++
T Consensus 231 N~~~a~~ia~~nE~~~la~~~Gid~~~v~~~~ 262 (481)
T 2o3j_A 231 NAFLAQRISSINSISAVCEATGAEISEVAHAV 262 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHH
Confidence 763 46788999999988 99999999998
No 138
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=99.45 E-value=1.4e-13 Score=152.99 Aligned_cols=108 Identities=15% Similarity=0.206 Sum_probs=98.3
Q ss_pred CCCHHHHHHHHHHHHHcCCeeEEEcCCCchhhhhhhhHHHHHHHHHHHcCC--CHHHHHHHH-HhcCCCc---cHHHHHH
Q 004972 460 RTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGV--DVFRIDSAI-RSFGLPI---GPFQLLD 533 (721)
Q Consensus 460 ~t~~e~~~~~~~l~~~lG~~~v~v~d~~gfi~nRl~~~~~~Ea~~l~~~Gv--~~~~ID~a~-~~~G~p~---Gpf~~~D 533 (721)
.+++++.+.+..+.+.+|+.++.+ .+|+|+||++.+++|||++++++|+ +++|||.++ .++|||+ |||+++|
T Consensus 331 ~~~~~~~~~~~~~~~~~g~~~~~~--~~g~i~~Rll~~~~nEa~~~l~eGIa~~~~dID~a~~~G~G~p~~~gGP~~~~D 408 (463)
T 1zcj_A 331 KPDPWLSTFLSQYREVHHIEQRTI--SKEEILERCLYSLINEAFRILEEGMAARPEHIDVIYLHGYGWPRHKGGPMFYAA 408 (463)
T ss_dssp EECHHHHHHHHHHHHHTTCCCCCC--CHHHHHHHHHHHHHHHHHHHHHTTSBSCHHHHHHHHHHHSCCCGGGCCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCcccC--CHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhCCCCCCCCcChHHHHH
Confidence 468999999988888888766543 3799999999999999999999998 599999999 9999998 9999999
Q ss_pred hhchHHHHHHHHHHHHhCCC--CCCCcHHHHHHHHcCC
Q 004972 534 LAGYGVAAATSKEFDKAFPD--RSFQSPLVDLLLKSGR 569 (721)
Q Consensus 534 ~~Gld~~~~~~~~l~~~~~~--~~~~~~~l~~~v~~G~ 569 (721)
.+|+|.++++++.+++.+++ ++.|+++|++|+++|+
T Consensus 409 ~~Gl~~~~~~~~~l~~~~g~~~~~~p~~lL~~~v~~G~ 446 (463)
T 1zcj_A 409 SVGLPTVLEKLQKYYRQNPDIPQLEPSDYLRRLVAQGS 446 (463)
T ss_dssp HHCHHHHHHHHHHHHHHCTTCGGGSCCHHHHHHHHTTC
T ss_pred HhCHHHHHHHHHHHHHHhCCCccCCCCHHHHHHHHcCC
Confidence 99999999999999999998 5569999999999986
No 139
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=99.44 E-value=5.4e-13 Score=137.19 Aligned_cols=147 Identities=12% Similarity=0.070 Sum_probs=111.8
Q ss_pred ceeEEEEcCCCCcHHHHHHHHHCC----CceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-
Q 004972 305 VRKVAVIGGGLMGSGIATAHILNN----IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY- 379 (721)
Q Consensus 305 ~~kI~VIG~G~mG~~iA~~la~~G----~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~- 379 (721)
.+||+|||+|.||+++|..|+++| ++|++||++++. .| +..+++.
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~~-----------------~g-------------~~~~~~~~ 53 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKKN-----------------TT-------------LNYMSSNE 53 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCCS-----------------SS-------------SEECSCHH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCccc-----------------Cc-------------eEEeCCHH
Confidence 358999999999999999999999 799999998764 01 2334444
Q ss_pred cccCCCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhcccCCCCcEEEecCCCCCCCCCeeE-EecC
Q 004972 380 SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLE-IVRT 458 (721)
Q Consensus 380 ~~l~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~~l~~~~~~~~r~ig~h~~~p~~~~~lvE-iv~~ 458 (721)
+.+++||+||+|+| .....+++.++.+.+ +++++++.++++....+.+.+....+++...+..|......+. ++++
T Consensus 54 ~~~~~~D~vi~~v~--~~~~~~v~~~l~~~l-~~~~vv~~~~gi~~~~l~~~~~~~~~~v~~~p~~p~~~~~g~~~~~~~ 130 (262)
T 2rcy_A 54 ELARHCDIIVCAVK--PDIAGSVLNNIKPYL-SSKLLISICGGLNIGKLEEMVGSENKIVWVMPNTPCLVGEGSFIYCSN 130 (262)
T ss_dssp HHHHHCSEEEECSC--TTTHHHHHHHSGGGC-TTCEEEECCSSCCHHHHHHHHCTTSEEEEEECCGGGGGTCEEEEEEEC
T ss_pred HHHhcCCEEEEEeC--HHHHHHHHHHHHHhc-CCCEEEEECCCCCHHHHHHHhCCCCcEEEECCChHHHHcCCeEEEEeC
Confidence 55788999999999 456778888888888 5667778899999887777765433444333444444444444 4567
Q ss_pred CCCCHHHHHHHHHHHHHcCCeeEEEcC
Q 004972 459 ERTSAQVILDLMTVGKIIKKVPVVVGN 485 (721)
Q Consensus 459 ~~t~~e~~~~~~~l~~~lG~~~v~v~d 485 (721)
+.++++.++.+.++++.+|+ ++++++
T Consensus 131 ~~~~~~~~~~~~~ll~~~G~-~~~~~~ 156 (262)
T 2rcy_A 131 KNVNSTDKKYVNDIFNSCGI-IHEIKE 156 (262)
T ss_dssp TTCCHHHHHHHHHHHHTSEE-EEECCG
T ss_pred CCCCHHHHHHHHHHHHhCCC-EEEeCH
Confidence 77899999999999999997 888764
No 140
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=99.44 E-value=1.2e-13 Score=144.77 Aligned_cols=182 Identities=17% Similarity=0.148 Sum_probs=126.8
Q ss_pred ceeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cccC
Q 004972 305 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 383 (721)
Q Consensus 305 ~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~ 383 (721)
++||+|||+|.||..+|..|++.|++|++|| ++++++...+ .| +..+++. +.++
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~~~~~~~~~-----------~g-------------~~~~~~~~~~~~ 57 (295)
T 1yb4_A 3 AMKLGFIGLGIMGSPMAINLARAGHQLHVTT-IGPVADELLS-----------LG-------------AVNVETARQVTE 57 (295)
T ss_dssp -CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SSCCCHHHHT-----------TT-------------CBCCSSHHHHHH
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CHHHHHHHHH-----------cC-------------CcccCCHHHHHh
Confidence 4689999999999999999999999999999 8877655321 12 2233444 4578
Q ss_pred CCCEEEEcccCChHHHHHHHH---HHHhhCCCCeEEEecCCCCC--HHHHhcccCCCCcEEEecCCCCCCC--------C
Q 004972 384 DVDMVIEAVIESVPLKQKIFS---ELEKACPPHCILATNTSTID--LNIVGEKTSSQDRIIGAHFFSPAHV--------M 450 (721)
Q Consensus 384 ~aDlVIeavpe~~~~k~~v~~---~l~~~~~~~~ii~s~ts~~~--i~~l~~~~~~~~r~ig~h~~~p~~~--------~ 450 (721)
++|+||+|+|.+..++ .++. ++.+.++++++|++.+++.+ ..++.+.+... +.||++.|.. .
T Consensus 58 ~~D~vi~~vp~~~~~~-~v~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~----g~~~~~~p~~~~~~~a~~g 132 (295)
T 1yb4_A 58 FADIIFIMVPDTPQVE-DVLFGEHGCAKTSLQGKTIVDMSSISPIETKRFAQRVNEM----GADYLDAPVSGGEIGAREG 132 (295)
T ss_dssp TCSEEEECCSSHHHHH-HHHHSTTSSTTSCCTTEEEEECSCCCHHHHHHHHHHHHTT----TEEEEECCEESHHHHHHHT
T ss_pred cCCEEEEECCCHHHHH-HHHhCchhHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHc----CCeEEEccCCCCHHHHHcC
Confidence 9999999999555443 4444 67777888998887666533 33555544321 3444433321 2
Q ss_pred CeeEEecCCCCCHHHHHHHHHHHHHcCCeeEEEcC-CCc----hhhhhh---hhHHHHHHHHHHHc-CCCHHHHHHHH
Q 004972 451 PLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN-CTG----FAVNRA---FFPYSQSARLLVSL-GVDVFRIDSAI 519 (721)
Q Consensus 451 ~lvEiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d-~~g----fi~nRl---~~~~~~Ea~~l~~~-Gv~~~~ID~a~ 519 (721)
.+..++.+ +++.++.+.++++.+|..++++++ ..+ ++.|.+ +...++|++.+++. |++++++..++
T Consensus 133 ~~~~~~~~---~~~~~~~~~~ll~~~g~~~~~~~~~~~~~~~Kl~~n~~~~~~~~~~~E~~~l~~~~G~~~~~~~~~~ 207 (295)
T 1yb4_A 133 TLSIMVGG---EQKVFDRVKPLFDILGKNITLVGGNGDGQTCKVANQIIVALNIEAVSEALVFASKAGADPVRVRQAL 207 (295)
T ss_dssp CEEEEEES---CHHHHHHHHHHHHHHEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred CeEEEECC---CHHHHHHHHHHHHHhcCCEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 33444444 789999999999999999988865 233 334443 23467899998877 99999999888
No 141
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=99.44 E-value=1.6e-13 Score=137.43 Aligned_cols=155 Identities=18% Similarity=0.231 Sum_probs=114.6
Q ss_pred CCceeEEEEcCCCCcHHHHHHHHHCCCceEE-EeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCccc
Q 004972 303 RGVRKVAVIGGGLMGSGIATAHILNNIYVVL-KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE 381 (721)
Q Consensus 303 ~~~~kI~VIG~G~mG~~iA~~la~~G~~V~l-~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 381 (721)
|.|+||+|||+|.||.++|..|+++|++|++ ||+++++++...+.. + ....+++.+.
T Consensus 21 m~mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~----------g------------~~~~~~~~~~ 78 (220)
T 4huj_A 21 QSMTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDRF----------G------------ASVKAVELKD 78 (220)
T ss_dssp GGSCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHH----------T------------TTEEECCHHH
T ss_pred hcCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHh----------C------------CCcccChHHH
Confidence 4568999999999999999999999999999 999999877643211 1 1112344466
Q ss_pred cCCCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCC--------------CHHHHhcccCCCCcEEEecCCCCC
Q 004972 382 FKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI--------------DLNIVGEKTSSQDRIIGAHFFSPA 447 (721)
Q Consensus 382 l~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~--------------~i~~l~~~~~~~~r~ig~h~~~p~ 447 (721)
++++|+||+|+| .....+++.++.+ + ++++|++.++++ ....+++.++ ..+++..+++.|.
T Consensus 79 ~~~aDvVilavp--~~~~~~v~~~l~~-~-~~~ivi~~~~g~~~~~~~~~~~~~~~~~~~l~~~l~-~~~vv~~~~~~~~ 153 (220)
T 4huj_A 79 ALQADVVILAVP--YDSIADIVTQVSD-W-GGQIVVDASNAIDFPAFKPRDLGGRLSTEIVSELVP-GAKVVKAFNTLPA 153 (220)
T ss_dssp HTTSSEEEEESC--GGGHHHHHTTCSC-C-TTCEEEECCCCBCTTTCCBCCCTTCCHHHHHHHHST-TCEEEEESCSSCH
T ss_pred HhcCCEEEEeCC--hHHHHHHHHHhhc-c-CCCEEEEcCCCCCcccccccccCCCcHHHHHHHHCC-CCCEEECCCCCCH
Confidence 889999999998 7778888888766 4 477888888777 3456666664 4577777655444
Q ss_pred CCCC---------eeEEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCC
Q 004972 448 HVMP---------LLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 486 (721)
Q Consensus 448 ~~~~---------lvEiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~ 486 (721)
.... ...++.+ .++++.+.+.++++.+|+.++.+++.
T Consensus 154 ~v~~~g~~~~~~~~~v~~~g--~~~~~~~~v~~l~~~~G~~~~~~G~l 199 (220)
T 4huj_A 154 AVLAADPDKGTGSRVLFLSG--NHSDANRQVAELISSLGFAPVDLGTL 199 (220)
T ss_dssp HHHTSCSBCSSCEEEEEEEE--SCHHHHHHHHHHHHHTTCEEEECCSH
T ss_pred HHhhhCcccCCCCeeEEEeC--CCHHHHHHHHHHHHHhCCCeEeeCCh
Confidence 3221 2223334 46999999999999999999998763
No 142
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=99.41 E-value=3.1e-13 Score=149.55 Aligned_cols=192 Identities=13% Similarity=0.038 Sum_probs=130.9
Q ss_pred CceeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCcc-c-
Q 004972 304 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS-E- 381 (721)
Q Consensus 304 ~~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~-~- 381 (721)
.+++|+|||+|.||.+||..|+++|++|++||+++++++...+ .+.. -..+..+++++ .
T Consensus 3 ~~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~-----------~g~~--------g~~i~~~~s~~e~v 63 (484)
T 4gwg_A 3 AQADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLA-----------NEAK--------GTKVVGAQSLKEMV 63 (484)
T ss_dssp CCBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHH-----------TTTT--------TSSCEECSSHHHHH
T ss_pred CCCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh-----------cccC--------CCceeccCCHHHHH
Confidence 4578999999999999999999999999999999998776532 1100 01344445552 2
Q ss_pred --cCCCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHH--HHhcccC-CCCcEEEecCCCCC---CCCCee
Q 004972 382 --FKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFFSPA---HVMPLL 453 (721)
Q Consensus 382 --l~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~--~l~~~~~-~~~r~ig~h~~~p~---~~~~lv 453 (721)
++++|+||+|||.+.. ...++.++.+.++++.+|++.+++.+.. .+.+.+. ...+|++......+ ..++
T Consensus 64 ~~l~~aDvVil~Vp~~~~-v~~vl~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~Gi~fvd~pVsGg~~gA~~G~-- 140 (484)
T 4gwg_A 64 SKLKKPRRIILLVKAGQA-VDDFIEKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGILFVGSGVSGGEEGARYGP-- 140 (484)
T ss_dssp HTBCSSCEEEECSCSSHH-HHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHHHHHHHCC--
T ss_pred hhccCCCEEEEecCChHH-HHHHHHHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhccccccCCccCCHHHHhcCC--
Confidence 3469999999996544 4567789999999999998877666533 3333332 23345554221111 1122
Q ss_pred EEecCCCCCHHHHHHHHHHHHHcCCee-------EEEcCC-Cc----hhhhhhh---hHHHHHHHHHHHc--CCCHHHHH
Q 004972 454 EIVRTERTSAQVILDLMTVGKIIKKVP-------VVVGNC-TG----FAVNRAF---FPYSQSARLLVSL--GVDVFRID 516 (721)
Q Consensus 454 Eiv~~~~t~~e~~~~~~~l~~~lG~~~-------v~v~d~-~g----fi~nRl~---~~~~~Ea~~l~~~--Gv~~~~ID 516 (721)
-++++. ++++++.++++++.+|..+ +++++. .| .+-|-+. ...++|++.+++. |++++++-
T Consensus 141 ~im~GG--~~ea~~~v~pll~~ig~~v~~~~~~~~~~G~~Gag~~vKmv~N~i~~~~m~~iaEa~~l~~~~~Gld~~~l~ 218 (484)
T 4gwg_A 141 SLMPGG--NKEAWPHIKTIFQGIAAKVGTGEPCCDWVGDEGAGHFVKMVHNGIEYGDMQLICEAYHLMKDVLGMAQDEMA 218 (484)
T ss_dssp EEEEEE--CGGGHHHHHHHHHHHSCBCTTSCBSBCCCEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHH
T ss_pred eeecCC--CHHHHHHHHHHHHHhcCcccCCCceEEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHH
Confidence 244442 6899999999999999887 777652 12 2334443 3346799999986 89999998
Q ss_pred HHH
Q 004972 517 SAI 519 (721)
Q Consensus 517 ~a~ 519 (721)
.++
T Consensus 219 ~v~ 221 (484)
T 4gwg_A 219 QAF 221 (484)
T ss_dssp HHH
T ss_pred HHH
Confidence 887
No 143
>1y7o_A ATP-dependent CLP protease proteolytic subunit; hydrolase; 2.51A {Streptococcus pneumoniae} SCOP: c.14.1.1
Probab=99.41 E-value=6.1e-13 Score=132.09 Aligned_cols=137 Identities=16% Similarity=0.186 Sum_probs=108.7
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccCCCcccccchHHHHHHHHHHhhCCCcEEEEEC
Q 004972 27 ALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVE 106 (721)
Q Consensus 27 al~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~p~Iaav~ 106 (721)
.++.++.+++.+.|..++.+++++.|+|.- .|.|+++.. ...++ +.|..+++||+++++
T Consensus 53 ~I~~~~a~~i~~~L~~l~~~~~~k~I~l~I----nSPGG~v~a----------------g~~I~-~~i~~~~~pV~t~v~ 111 (218)
T 1y7o_A 53 PVEDNMANSVIAQLLFLDAQDSTKDIYLYV----NTPGGSVSA----------------GLAIV-DTMNFIKADVQTIVM 111 (218)
T ss_dssp CBCHHHHHHHHHHHHHHHHHCTTSCEEEEE----EECCBCHHH----------------HHHHH-HHHHHSSSCEEEEEE
T ss_pred EECHHHHHHHHHHHHHHHhcCCCCCEEEEE----ECcCCCHHH----------------HHHHH-HHHHhcCCCEEEEEc
Confidence 488999999999999999887778887763 244444321 12344 567889999999999
Q ss_pred CcccccchHhhhhcCE--EEeeCCceEeCcccccCccc--c-c------------------cccccccCH--HHHHHHHH
Q 004972 107 GLALGGGLELAMGCHA--RIAAPKTQLGLPELTLGVIP--G-T------------------QRLPRLVGL--SKAIEMML 161 (721)
Q Consensus 107 G~a~GgG~~lalacD~--ria~~~a~~~~pe~~~Gl~P--~-~------------------~~l~r~~G~--~~a~~l~l 161 (721)
|.|.++|+.|+++||. |+|.++++|++++.. |.+| | . ..+++..|. .++.+++.
T Consensus 112 G~AaS~G~~Ia~a~d~g~r~a~p~a~igih~p~-~g~~~~G~~~di~~~~~~i~~~~~~~~~~~a~~~G~~~~~i~~~~~ 190 (218)
T 1y7o_A 112 GMAASMGTVIASSGAKGKRFMLPNAEYMIHQPM-GGTGGGTQQTDMAIAPEHLLKTRNTLEKILAENSGQSMEKVHADAE 190 (218)
T ss_dssp EEEETHHHHHHTTSCTTCEEECTTCEEECCCCC---------------CHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred cEeHHHHHHHHHcCCcCcEEEcCCcEEEEeccc-ccccCcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHh
Confidence 9999999999999999 999999999999987 4342 2 1 346666666 48889999
Q ss_pred cCCCcCHHHHHHcCCccEEcCCch
Q 004972 162 LSKSITSEEGWKLGLIDAVVTSEE 185 (721)
Q Consensus 162 tg~~~~a~eA~~~Glv~~vv~~~~ 185 (721)
+|+.++|+||+++||||+|+++++
T Consensus 191 ~~~~~ta~EA~e~GLVD~v~~~~~ 214 (218)
T 1y7o_A 191 RDNWMSAQETLEYGFIDEIMANNS 214 (218)
T ss_dssp SCCCBCHHHHHHHTSCSEECCCC-
T ss_pred CCCEEcHHHHHHCCCCcEEcCcCC
Confidence 999999999999999999998765
No 144
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=99.40 E-value=6.7e-14 Score=145.71 Aligned_cols=89 Identities=17% Similarity=0.194 Sum_probs=79.5
Q ss_pred ChHHHHHHHHHHHHHHHHHHhhcCcCCChhHHHHHHHHccCCCCCCCcHhHHHHHhCHHHHHHHHHHHHHhhCCCCCCCH
Q 004972 616 TEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSR 695 (721)
Q Consensus 616 ~~~~i~~r~~~~~~~ea~~~l~~gv~~~~~~iD~~~~~g~g~~~~~~Gp~~~~d~~G~~~~~~~~~~~~~~~~~~~~p~~ 695 (721)
.++++.||++.++++||++++++|++ ++++||.++..|+|+|+ |||+++|.+|+|+.+.++++ ....+++.|++
T Consensus 188 ~~g~i~nr~~~~~~~ea~~l~~~g~~-~~~~id~~~~~~~g~~~---Gp~~~~D~~Gld~~~~~~~~--~~~~~~~~~~~ 261 (283)
T 4e12_A 188 KAGYVLNSLLVPLLDAAAELLVDGIA-DPETIDKTWRIGTGAPK---GPFEIFDIVGLTTAYNISSV--SGPKQREFAAY 261 (283)
T ss_dssp CTTTTHHHHHHHHHHHHHHHHHTTSC-CHHHHHHHHHHHHCCSS---CHHHHHHHHCHHHHHHHHHT--SCHHHHHHHHH
T ss_pred CCCEEehHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHhccCCCc---CHHHHHHhccHHHHHHHHhc--cccCcccCchH
Confidence 46789999999999999999999999 99999999999999999 99999999999999999883 11112567889
Q ss_pred HHHHHH-------HcCCCCcCC
Q 004972 696 FLEERA-------TKGIPLSAP 710 (721)
Q Consensus 696 ~l~~~~-------~~g~~f~~~ 710 (721)
++++|+ |+|+|||+|
T Consensus 262 ~~~~~v~~g~lG~k~g~Gfy~y 283 (283)
T 4e12_A 262 LKENYIDKGKLGLATGEGFYRY 283 (283)
T ss_dssp HHHHTGGGTCCBGGGTBSSSBC
T ss_pred HHHHHHHCCCCceeCCeEeecC
Confidence 999999 789999998
No 145
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=99.39 E-value=7e-13 Score=148.07 Aligned_cols=190 Identities=13% Similarity=0.075 Sum_probs=132.3
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cccCC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 384 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 384 (721)
.+|+|||+|.||++||..|+++|++|++||+++++++...+. .. .+ ..+..++++ +.+++
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~-------~~-~~-----------~gi~~~~s~~e~v~~ 71 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQSKVDHFLAN-------EA-KG-----------KSIIGATSIEDFISK 71 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSHHHHHHHHT-------TT-TT-----------SSEECCSSHHHHHHT
T ss_pred CCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHcc-------cc-cC-----------CCeEEeCCHHHHHhc
Confidence 479999999999999999999999999999999987765320 00 00 135555665 33444
Q ss_pred ---CCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCH--HHHhcccC-CCCcEEEecCCCCCC---CCCeeEE
Q 004972 385 ---VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--NIVGEKTS-SQDRIIGAHFFSPAH---VMPLLEI 455 (721)
Q Consensus 385 ---aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i--~~l~~~~~-~~~r~ig~h~~~p~~---~~~lvEi 455 (721)
||+||+|||.+.. .+++++++.+.++++++|++.+++.+. ..+.+.+. ...+|+++....++. .++ .+
T Consensus 72 l~~aDvVil~Vp~~~~-v~~vl~~l~~~l~~g~iIId~s~~~~~~~~~l~~~l~~~g~~~v~~pVsgg~~~a~~G~--~i 148 (497)
T 2p4q_A 72 LKRPRKVMLLVKAGAP-VDALINQIVPLLEKGDIIIDGGNSHFPDSNRRYEELKKKGILFVGSGVSGGEEGARYGP--SL 148 (497)
T ss_dssp SCSSCEEEECCCSSHH-HHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHHHHHHHCC--EE
T ss_pred CCCCCEEEEEcCChHH-HHHHHHHHHHhCCCCCEEEECCCCChhHHHHHHHHHHHcCCceeCCCcccChhHhhcCC--eE
Confidence 9999999995544 456678899999999999876666553 23444432 223455543222111 112 24
Q ss_pred ecCCCCCHHHHHHHHHHHHHcCCe------eEEEcC-CCc----hhhhhhh---hHHHHHHHHHHHc--CCCHHHHHHHH
Q 004972 456 VRTERTSAQVILDLMTVGKIIKKV------PVVVGN-CTG----FAVNRAF---FPYSQSARLLVSL--GVDVFRIDSAI 519 (721)
Q Consensus 456 v~~~~t~~e~~~~~~~l~~~lG~~------~v~v~d-~~g----fi~nRl~---~~~~~Ea~~l~~~--Gv~~~~ID~a~ 519 (721)
+.+. ++++++.++++++.+|+. ++++++ ..| ++.|.+. ...++|++.+++. |++++++..++
T Consensus 149 m~gg--~~e~~~~v~~ll~~~g~~~dGe~~v~~vg~~G~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~lGl~~~~~~~~~ 226 (497)
T 2p4q_A 149 MPGG--SEEAWPHIKNIFQSISAKSDGEPCCEWVGPAGAGHYVKMVHNGIEYGDMQLICEAYDIMKRLGGFTDKEISDVF 226 (497)
T ss_dssp EEEE--CGGGHHHHHHHHHHHSCEETTEESCCCCEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHH
T ss_pred EecC--CHHHHHHHHHHHHHhcCccCCCCceEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHH
Confidence 4442 688999999999999988 667753 333 3456664 4557899998886 89999999887
No 146
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=99.39 E-value=1.4e-12 Score=145.19 Aligned_cols=192 Identities=14% Similarity=0.056 Sum_probs=132.7
Q ss_pred CCceeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cc
Q 004972 303 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SE 381 (721)
Q Consensus 303 ~~~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~ 381 (721)
+.-++|+|||+|.||++||..|+++|++|++||+++++++...+.. . + ..+..++++ +.
T Consensus 13 ~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~~~~~~l~~~~--------~-~-----------~gi~~~~s~~e~ 72 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSREKTEEVIAEN--------P-G-----------KKLVPYYTVKEF 72 (480)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHS--------T-T-----------SCEEECSSHHHH
T ss_pred cCCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHhhC--------C-C-----------CCeEEeCCHHHH
Confidence 4456899999999999999999999999999999999877653210 0 0 135556666 44
Q ss_pred cCC---CCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCH--HHHhcccC-CCCcEEEecCCCCC---CCCCe
Q 004972 382 FKD---VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--NIVGEKTS-SQDRIIGAHFFSPA---HVMPL 452 (721)
Q Consensus 382 l~~---aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i--~~l~~~~~-~~~r~ig~h~~~p~---~~~~l 452 (721)
+++ ||+||.|||.+.. .++++.++.+.++++++|++.+++.+. ..+.+.+. ...+++++.....+ ..++
T Consensus 73 v~~l~~aDvVil~Vp~~~~-v~~vl~~l~~~l~~g~iIId~s~g~~~~t~~l~~~l~~~g~~~v~~pv~gg~~~a~~g~- 150 (480)
T 2zyd_A 73 VESLETPRRILLMVKAGAG-TDAAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFNFIGTGVSGGEEGALKGP- 150 (480)
T ss_dssp HHTBCSSCEEEECSCSSSH-HHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHHHHHHHCC-
T ss_pred HhCCCCCCEEEEECCCHHH-HHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHCCCCeeCCccccCHhHHhcCC-
Confidence 454 9999999995433 456778899999999999887776644 33444442 23355554221111 1222
Q ss_pred eEEecCCCCCHHHHHHHHHHHHHcCCe-------eEEEcCC-Cc----hhhhhhh---hHHHHHHHHHHHc--CCCHHHH
Q 004972 453 LEIVRTERTSAQVILDLMTVGKIIKKV-------PVVVGNC-TG----FAVNRAF---FPYSQSARLLVSL--GVDVFRI 515 (721)
Q Consensus 453 vEiv~~~~t~~e~~~~~~~l~~~lG~~-------~v~v~d~-~g----fi~nRl~---~~~~~Ea~~l~~~--Gv~~~~I 515 (721)
.++.+. +++.++.+.++++.+|.. ++++++. .| ++.|.+. ...+.|++.+++. |++++++
T Consensus 151 -~i~~gg--~~~~~~~v~~ll~~~g~~~~dGe~~v~~~g~~G~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~lGl~~~~~ 227 (480)
T 2zyd_A 151 -SIMPGG--QKEAYELVAPILTKIAAVAEDGEPCVTYIGADGAGHYVKMVHNGIEYGDMQLIAEAYSLLKGGLNLTNEEL 227 (480)
T ss_dssp -EEEEES--CHHHHHHHHHHHHHHSCBCTTSCBSBCCCBSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
T ss_pred -eEEecC--CHHHHHHHHHHHHHHhccccCCCceEEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHH
Confidence 245443 689999999999999987 5666652 22 3446553 3456799998876 9999999
Q ss_pred HHHH
Q 004972 516 DSAI 519 (721)
Q Consensus 516 D~a~ 519 (721)
..++
T Consensus 228 ~~l~ 231 (480)
T 2zyd_A 228 AQTF 231 (480)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8877
No 147
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=99.37 E-value=1.6e-12 Score=136.24 Aligned_cols=139 Identities=17% Similarity=0.115 Sum_probs=106.7
Q ss_pred ceeEEEEc-CCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCccccC
Q 004972 305 VRKVAVIG-GGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 383 (721)
Q Consensus 305 ~~kI~VIG-~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~ 383 (721)
++||+||| +|.||+++|..|++.|++|++||++++. +..+.++
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~------------------------------------~~~~~~~ 64 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWA------------------------------------VAESILA 64 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGG------------------------------------GHHHHHT
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCccc------------------------------------CHHHHhc
Confidence 56899999 9999999999999999999999998652 0113467
Q ss_pred CCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCC--HHHHhcccCCCCcEEEecCCCCCC----CCCeeEEec
Q 004972 384 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID--LNIVGEKTSSQDRIIGAHFFSPAH----VMPLLEIVR 457 (721)
Q Consensus 384 ~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~--i~~l~~~~~~~~r~ig~h~~~p~~----~~~lvEiv~ 457 (721)
+||+||+||| .....+++.++.++++++++|++.+|... +..+.... +.++++.||..++. .+..+-+++
T Consensus 65 ~aDvVilavp--~~~~~~vl~~l~~~l~~~~iv~~~~svk~~~~~~~~~~~--~~~~v~~hP~~g~~~~~~~g~~~~l~~ 140 (298)
T 2pv7_A 65 NADVVIVSVP--INLTLETIERLKPYLTENMLLADLTSVKREPLAKMLEVH--TGAVLGLHPMFGADIASMAKQVVVRCD 140 (298)
T ss_dssp TCSEEEECSC--GGGHHHHHHHHGGGCCTTSEEEECCSCCHHHHHHHHHHC--SSEEEEEEECSCTTCSCCTTCEEEEEE
T ss_pred CCCEEEEeCC--HHHHHHHHHHHHhhcCCCcEEEECCCCCcHHHHHHHHhc--CCCEEeeCCCCCCCchhhcCCeEEEec
Confidence 8999999999 56688999999999999998876554322 33344333 46899999965442 233455555
Q ss_pred CCCCCHHHHHHHHHHHHHcCCeeEEEcC
Q 004972 458 TERTSAQVILDLMTVGKIIKKVPVVVGN 485 (721)
Q Consensus 458 ~~~t~~e~~~~~~~l~~~lG~~~v~v~d 485 (721)
+. +++.++.+.++++.+|..++++.+
T Consensus 141 ~~--~~~~~~~v~~l~~~~G~~~~~~~~ 166 (298)
T 2pv7_A 141 GR--FPERYEWLLEQIQIWGAKIYQTNA 166 (298)
T ss_dssp EE--CGGGTHHHHHHHHHTTCEEEECCH
T ss_pred CC--CHHHHHHHHHHHHHcCCEEEECCH
Confidence 54 788899999999999999988864
No 148
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=99.37 E-value=3.1e-12 Score=142.57 Aligned_cols=191 Identities=13% Similarity=0.032 Sum_probs=132.1
Q ss_pred ceeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cccC
Q 004972 305 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 383 (721)
Q Consensus 305 ~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~ 383 (721)
.+||+|||+|.||.++|..|+++|++|++||+++++++...+... + ..+..++++ +.++
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~---------~-----------~gi~~~~s~~e~v~ 64 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGYTVAIYNRTTSKTEEVFKEHQ---------D-----------KNLVFTKTLEEFVG 64 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTT---------T-----------SCEEECSSHHHHHH
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHhCc---------C-----------CCeEEeCCHHHHHh
Confidence 468999999999999999999999999999999998776532110 0 124555565 3344
Q ss_pred ---CCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCH--HHHhcccCC-CCcEEEecCCCCC---CCCCeeE
Q 004972 384 ---DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--NIVGEKTSS-QDRIIGAHFFSPA---HVMPLLE 454 (721)
Q Consensus 384 ---~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i--~~l~~~~~~-~~r~ig~h~~~p~---~~~~lvE 454 (721)
++|+||+|||.+.. ...++.++.+.++++++|++.+++.+. ..+.+.+.. ..++++.....++ ..++ .
T Consensus 65 ~l~~aDvVilavp~~~~-v~~vl~~l~~~l~~g~iiId~s~~~~~~~~~l~~~l~~~g~~~v~~pv~gg~~~a~~g~--~ 141 (474)
T 2iz1_A 65 SLEKPRRIMLMVQAGAA-TDATIKSLLPLLDIGDILIDGGNTHFPDTMRRNAELADSGINFIGTGVSGGEKGALLGP--S 141 (474)
T ss_dssp TBCSSCEEEECCCTTHH-HHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHTTTSSCEEEEEEECSHHHHHHHCC--C
T ss_pred hccCCCEEEEEccCchH-HHHHHHHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHCCCeEECCCCCCChhhhccCC--e
Confidence 49999999995544 446678899999999988876666543 345555432 2345544322111 1122 1
Q ss_pred EecCCCCCHHHHHHHHHHHHHcCCe--------eEEEcC-CCc----hhhhhhh---hHHHHHHHHHHHc--CCCHHHHH
Q 004972 455 IVRTERTSAQVILDLMTVGKIIKKV--------PVVVGN-CTG----FAVNRAF---FPYSQSARLLVSL--GVDVFRID 516 (721)
Q Consensus 455 iv~~~~t~~e~~~~~~~l~~~lG~~--------~v~v~d-~~g----fi~nRl~---~~~~~Ea~~l~~~--Gv~~~~ID 516 (721)
++++. +++.++.+.++++.+|.. +.++++ ..| ++.|.+. ...+.|++.+++. |++++++.
T Consensus 142 i~~gg--~~~~~~~v~~ll~~~g~~~~~dge~~~~~~g~~g~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~~Gl~~~~~~ 219 (474)
T 2iz1_A 142 MMPGG--QKEAYDLVAPIFEQIAAKAPQDGKPCVAYMGANGAGHYVKMVHNGIEYGDMQLIAESYDLLKRILGLSNAEIQ 219 (474)
T ss_dssp EEEEE--CHHHHHHHHHHHHHHSCBCTTTCCBSBCCCBSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHH
T ss_pred EEecC--CHHHHHHHHHHHHHHhcccccCCCceEEEECCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCHHHHH
Confidence 34443 789999999999999987 456654 222 4556663 3457799998876 89999999
Q ss_pred HHHH
Q 004972 517 SAIR 520 (721)
Q Consensus 517 ~a~~ 520 (721)
.++.
T Consensus 220 ~l~~ 223 (474)
T 2iz1_A 220 AIFE 223 (474)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8873
No 149
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=99.36 E-value=1.6e-12 Score=138.60 Aligned_cols=182 Identities=16% Similarity=0.086 Sum_probs=124.1
Q ss_pred ceeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHH-HHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-ccc
Q 004972 305 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEY-LLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 382 (721)
Q Consensus 305 ~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l 382 (721)
.+||+|||+|.||+++|..|...|++|+++|++++. .+.+. +.| +..+ +. +.+
T Consensus 16 ~~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~~~~~~~a~-----------~~G-------------~~~~-~~~e~~ 70 (338)
T 1np3_A 16 GKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAE-----------AHG-------------LKVA-DVKTAV 70 (338)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHH-----------HTT-------------CEEE-CHHHHH
T ss_pred CCEEEEECchHHHHHHHHHHHHCcCEEEEEECChHHHHHHHH-----------HCC-------------CEEc-cHHHHH
Confidence 358999999999999999999999999999998765 33221 112 2233 44 567
Q ss_pred CCCCEEEEcccCChHHHHHHHH-HHHhhCCCCeEEEecCCCCCHHHHhccc-CCCCcEEEecCCCCCCC---------CC
Q 004972 383 KDVDMVIEAVIESVPLKQKIFS-ELEKACPPHCILATNTSTIDLNIVGEKT-SSQDRIIGAHFFSPAHV---------MP 451 (721)
Q Consensus 383 ~~aDlVIeavpe~~~~k~~v~~-~l~~~~~~~~ii~s~ts~~~i~~l~~~~-~~~~r~ig~h~~~p~~~---------~~ 451 (721)
++||+||+||| ......++. ++.+.++++++|++. +++.+ .+.... .....+++.||..|.+. +.
T Consensus 71 ~~aDvVilavp--~~~~~~v~~~~i~~~l~~~~ivi~~-~gv~~-~~~~~~~~~~~~vv~~~P~gp~~a~~~l~~~G~g~ 146 (338)
T 1np3_A 71 AAADVVMILTP--DEFQGRLYKEEIEPNLKKGATLAFA-HGFSI-HYNQVVPRADLDVIMIAPKAPGHTVRSEFVKGGGI 146 (338)
T ss_dssp HTCSEEEECSC--HHHHHHHHHHHTGGGCCTTCEEEES-CCHHH-HTTSSCCCTTCEEEEEEESSCSHHHHHHHHTTCCC
T ss_pred hcCCEEEEeCC--cHHHHHHHHHHHHhhCCCCCEEEEc-CCchh-HHHhhcCCCCcEEEeccCCCCchhHHHHHhccCCC
Confidence 89999999999 555678888 898999999988875 44444 333322 12235999999777641 22
Q ss_pred eeEEecCCCCCHHHHHHHHHHHHHcCC-e--eEEEc----C-CCchhhhhhhhH----HHHHHH-HHHHcCCCHHHH
Q 004972 452 LLEIVRTERTSAQVILDLMTVGKIIKK-V--PVVVG----N-CTGFAVNRAFFP----YSQSAR-LLVSLGVDVFRI 515 (721)
Q Consensus 452 lvEiv~~~~t~~e~~~~~~~l~~~lG~-~--~v~v~----d-~~gfi~nRl~~~----~~~Ea~-~l~~~Gv~~~~I 515 (721)
.+-++++..++++..+.+..+++.+|. . ++.+. + ...++.+..+.. ++..++ .+++.|+++++.
T Consensus 147 ~~ii~~~~~~~~~a~~~~~~l~~~lG~~~agv~~~~~~~~~~~~~~~s~~~l~G~lp~~ia~~~e~l~~~Gl~~~~a 223 (338)
T 1np3_A 147 PDLIAIYQDASGNAKNVALSYACGVGGGRTGIIETTFKDETETDLFGEQAVLCGGCVELVKAGFETLVEAGYAPEMA 223 (338)
T ss_dssp CEEEEEEECSSSCHHHHHHHHHHHTTHHHHCEEECCHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHTTCCHHHH
T ss_pred eEEEEecCCCCHHHHHHHHHHHHHcCCCccceEeechhcccchHHHHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHH
Confidence 333567767788999999999999998 4 55552 2 234444434322 233333 335668887654
No 150
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=99.36 E-value=2.7e-12 Score=133.82 Aligned_cols=184 Identities=15% Similarity=0.057 Sum_probs=124.3
Q ss_pred ceeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCccccCC
Q 004972 305 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 384 (721)
Q Consensus 305 ~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~ 384 (721)
|+||+|||+|.||..+|..|++ |++|++||+++++++...+. | +..++..+.+++
T Consensus 1 M~~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~~-----------g-------------~~~~~~~~~~~~ 55 (289)
T 2cvz_A 1 MEKVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTFEKALRHQEE-----------F-------------GSEAVPLERVAE 55 (289)
T ss_dssp -CCEEEECCSTTHHHHHHHHHT-TSCEEEECSSTHHHHHHHHH-----------H-------------CCEECCGGGGGG
T ss_pred CCeEEEEcccHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHC-----------C-------------CcccCHHHHHhC
Confidence 3589999999999999999999 99999999999887664321 1 111222255789
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCC--HHHHhcccCC-CCcEEEecCCCC-CC---CCCeeEEec
Q 004972 385 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID--LNIVGEKTSS-QDRIIGAHFFSP-AH---VMPLLEIVR 457 (721)
Q Consensus 385 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~--i~~l~~~~~~-~~r~ig~h~~~p-~~---~~~lvEiv~ 457 (721)
+|+||+|+|.+..+ ..+++++.+.++++++|++.++..+ ...+.+.+.. ...++.. +..+ +. ...+..++.
T Consensus 56 ~D~vi~~v~~~~~~-~~v~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~~~-p~~~~~~~~~~g~~~~~~~ 133 (289)
T 2cvz_A 56 ARVIFTCLPTTREV-YEVAEALYPYLREGTYWVDATSGEPEASRRLAERLREKGVTYLDA-PVSGGTSGAEAGTLTVMLG 133 (289)
T ss_dssp CSEEEECCSSHHHH-HHHHHHHTTTCCTTEEEEECSCCCHHHHHHHHHHHHTTTEEEEEC-CEESHHHHHHHTCEEEEEE
T ss_pred CCEEEEeCCChHHH-HHHHHHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEEe-cCCCChhHHhhCCeEEEEC
Confidence 99999999954443 4567888888888998885443322 3355554433 2234443 2211 10 112222333
Q ss_pred CCCCCHHHHHHHHHHHHHcCCeeEEEcCCC-c----hhhhhh---hhHHHHHHHHHHHc-CCCHHHHHHHH
Q 004972 458 TERTSAQVILDLMTVGKIIKKVPVVVGNCT-G----FAVNRA---FFPYSQSARLLVSL-GVDVFRIDSAI 519 (721)
Q Consensus 458 ~~~t~~e~~~~~~~l~~~lG~~~v~v~d~~-g----fi~nRl---~~~~~~Ea~~l~~~-Gv~~~~ID~a~ 519 (721)
.+++.++.+.+++ .+|..++++++.. + ++.|.+ +...++|++.+.+. |++++++..++
T Consensus 134 ---~~~~~~~~~~~ll-~~g~~~~~~~~~~~~~~~k~~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~ 200 (289)
T 2cvz_A 134 ---GPEEAVERVRPFL-AYAKKVVHVGPVGAGHAVKAINNALLAVNLWAAGEGLLALVKQGVSAEKALEVI 200 (289)
T ss_dssp ---SCHHHHHHHGGGC-TTEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred ---CCHHHHHHHHHHH-hhcCCeEEcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcCHHHHHHHH
Confidence 3789999999999 9999888887632 2 233553 34567899988876 99999998887
No 151
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=99.35 E-value=8.6e-12 Score=135.71 Aligned_cols=204 Identities=17% Similarity=0.147 Sum_probs=133.7
Q ss_pred CceeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHH--------HHHHHHhhhhcCCCCHHHHHHhhcCcee
Q 004972 304 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKT--------IEANVRGLVTRGKLTQDKANNALKMLKG 375 (721)
Q Consensus 304 ~~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~--------~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 375 (721)
+|.+|+|||+|.+|.++|..|++.|++|+++|+++++++...+. +...+.+.++ .+++++
T Consensus 20 ~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~------------~g~l~~ 87 (444)
T 3vtf_A 20 HMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNPSIVERLRAGRPHIYEPGLEEALGRALS------------SGRLSF 87 (444)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHH------------TTCEEE
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHH------------cCCeeE
Confidence 57899999999999999999999999999999999998876431 1111111122 246888
Q ss_pred ccCc-cccCCCCEEEEcccC--------ChHHHHHHHHHHHhhCC---CCeEEEecCCCCCHHH---Hh-----cccCCC
Q 004972 376 VLDY-SEFKDVDMVIEAVIE--------SVPLKQKIFSELEKACP---PHCILATNTSTIDLNI---VG-----EKTSSQ 435 (721)
Q Consensus 376 ~~~~-~~l~~aDlVIeavpe--------~~~~k~~v~~~l~~~~~---~~~ii~s~ts~~~i~~---l~-----~~~~~~ 435 (721)
+++. +++++||++|.|||. |+.......+.+.++++ ++.+|+. .||.++.. +. +.....
T Consensus 88 tt~~~~ai~~ad~~~I~VpTP~~~d~~~Dl~~v~~a~~~I~~~l~~~~~g~lVV~-eSTVppGtte~~~~~~l~~~~~~~ 166 (444)
T 3vtf_A 88 AESAEEAVAATDATFIAVGTPPAPDGSADLRYVEAAARAVGRGIRAKGRWHLVVV-KSTVPPGTTEGLVARAVAEEAGGV 166 (444)
T ss_dssp CSSHHHHHHTSSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHHHHCSCCEEEE-CSCCCTTTTTTHHHHHHHTTTTTC
T ss_pred EcCHHHHHhcCCceEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhhcCCCeEEEE-eCCCCCchHHHHHHHHHHHhCCCC
Confidence 9888 568999999999984 45567777778877764 3455543 33443321 11 111111
Q ss_pred CcEEEecCCCCCCCCCee---------EEecCCCCCHHHHHHHHHHHHHcCCeeEEEc----CCCchhhhhh---hhHHH
Q 004972 436 DRIIGAHFFSPAHVMPLL---------EIVRTERTSAQVILDLMTVGKIIKKVPVVVG----NCTGFAVNRA---FFPYS 499 (721)
Q Consensus 436 ~r~ig~h~~~p~~~~~lv---------Eiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~----d~~gfi~nRl---~~~~~ 499 (721)
.-.++ ++|....+.- -++.| .+++++.+.+..+++.+....+++. |...++.|-. -.+++
T Consensus 167 ~f~v~---~~PErl~eG~a~~d~~~~~riViG-~~~~~a~~~~~~ly~~~~~~~~~~~~~~AE~~Kl~eN~~ravnIa~~ 242 (444)
T 3vtf_A 167 KFSVA---SNPEFLREGSALEDFFKPDRIVIG-AGDERAASFLLDVYKAVDAPKLVMKPREAELVKYASNVFLALKISFA 242 (444)
T ss_dssp CCEEE---ECCCCCCTTSHHHHHHSCSCEEEE-ESSHHHHHHHHHHTTTSCSCEEEECHHHHHHHHHHHHHHHHHHHHHH
T ss_pred Cceee---cCcccccCCccccccccCCcEEEc-CCCHHHHHHHHHHHhccCCCEEEechhHHHHHHHHHHHHHHHHHHHH
Confidence 11222 2333332221 12322 2468888999999998877665543 2223444544 35789
Q ss_pred HHHHHHHHc-CCCHHHHHHHH-H--hcCC
Q 004972 500 QSARLLVSL-GVDVFRIDSAI-R--SFGL 524 (721)
Q Consensus 500 ~Ea~~l~~~-Gv~~~~ID~a~-~--~~G~ 524 (721)
||...+++. |+|+.+|-.++ . .+|+
T Consensus 243 NEla~ice~~GiDv~eV~~a~~~d~rig~ 271 (444)
T 3vtf_A 243 NEVGLLAKRLGVDTYRVFEAVGLDKRIGR 271 (444)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHTSTTSCS
T ss_pred HHHHHHHHHcCCCHHHHHHHhccCCCCCC
Confidence 999999988 99999998888 3 5554
No 152
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=99.34 E-value=7.3e-12 Score=128.89 Aligned_cols=174 Identities=14% Similarity=0.087 Sum_probs=115.2
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeC--CHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-ccc
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEV--NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 382 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l 382 (721)
+||+|||+|.||.++|..|+++|++|++||+ +++.++...+ .| +. ++. +.+
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~g~~V~~~~~~~~~~~~~~~~~-----------~g-------------~~--~~~~~~~ 54 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERART-----------VG-------------VT--ETSEEDV 54 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHH-----------HT-------------CE--ECCHHHH
T ss_pred CeEEEEechHHHHHHHHHHHHCCCeEEEeCCccCHHHHHHHHH-----------CC-------------Cc--CCHHHHH
Confidence 3799999999999999999999999999999 6666554321 11 22 333 556
Q ss_pred CCCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCH---HHHhcccCCCCcEEEecCCCCCC---CCCeeEEe
Q 004972 383 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL---NIVGEKTSSQDRIIGAHFFSPAH---VMPLLEIV 456 (721)
Q Consensus 383 ~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i---~~l~~~~~~~~r~ig~h~~~p~~---~~~lvEiv 456 (721)
++||+||+|||.+..... +.++.+.+++ +|++. |+..+ ..+.+.+.... ++..+.+.++. .+.. .++
T Consensus 55 ~~aDvvi~~v~~~~~~~~--~~~~~~~~~~--~vi~~-s~~~~~~~~~l~~~~~~~g-~~~~~v~~~~~~~~~g~~-~~~ 127 (264)
T 1i36_A 55 YSCPVVISAVTPGVALGA--ARRAGRHVRG--IYVDI-NNISPETVRMASSLIEKGG-FVDAAIMGSVRRKGADIR-IIA 127 (264)
T ss_dssp HTSSEEEECSCGGGHHHH--HHHHHTTCCS--EEEEC-SCCCHHHHHHHHHHCSSSE-EEEEEECSCHHHHGGGCE-EEE
T ss_pred hcCCEEEEECCCHHHHHH--HHHHHHhcCc--EEEEc-cCCCHHHHHHHHHHHhhCC-eeeeeeeCCccccccCCe-EEe
Confidence 899999999996544332 3567777766 55543 44433 35666665443 76766665443 2223 344
Q ss_pred cCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCch-----hhhhhh----hHHHHHHHHHHHc-CCCHHHHHHHH
Q 004972 457 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF-----AVNRAF----FPYSQSARLLVSL-GVDVFRIDSAI 519 (721)
Q Consensus 457 ~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~~gf-----i~nRl~----~~~~~Ea~~l~~~-Gv~~~~ID~a~ 519 (721)
.++. . +.+.+ ++.+|+.++++++.+|. +++..+ ...++|++.+.+. |++++.+ ..+
T Consensus 128 ~g~~--~---~~~~~-l~~~g~~~~~~~~~~g~~~~~kl~~n~~~~~~~~~~~Ea~~la~~~G~~~~~~-~~~ 193 (264)
T 1i36_A 128 SGRD--A---EEFMK-LNRYGLNIEVRGREPGDASAIKMLRSSYTKGVSALLWETLTAAHRLGLEEDVL-EML 193 (264)
T ss_dssp ESTT--H---HHHHG-GGGGTCEEEECSSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHH-HHH
T ss_pred cCCc--H---HHhhh-HHHcCCeeEECCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHH-HHH
Confidence 4432 2 67788 99999999998865553 334432 4457799888766 9987644 444
No 153
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=99.33 E-value=6e-12 Score=124.98 Aligned_cols=157 Identities=15% Similarity=0.160 Sum_probs=114.8
Q ss_pred eeEEEEc-CCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cccC
Q 004972 306 RKVAVIG-GGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 383 (721)
Q Consensus 306 ~kI~VIG-~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~ 383 (721)
+||+||| +|.||..++..|++.|++|+++|++++..+...+.+.. .+.. ..+.. +++ +.++
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~----~~~~------------~~~~~-~~~~~~~~ 63 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRR----IAGD------------ASITG-MKNEDAAE 63 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHH----HHSS------------CCEEE-EEHHHHHH
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc----cccc------------CCCCh-hhHHHHHh
Confidence 3799999 99999999999999999999999999887665432211 1110 12332 333 5578
Q ss_pred CCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCC--------------HHHHhcccCCCCcEEEecCCCCCC-
Q 004972 384 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID--------------LNIVGEKTSSQDRIIGAHFFSPAH- 448 (721)
Q Consensus 384 ~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~--------------i~~l~~~~~~~~r~ig~h~~~p~~- 448 (721)
++|+||.|+| .....+++.++.+.++ ++++++.++++. ..++++.+. ..+++..|+..|..
T Consensus 64 ~~D~Vi~~~~--~~~~~~~~~~l~~~~~-~~~vi~~~~g~~~~~~~~~~~~g~~~~~~l~~~~~-~~~~v~~~~~~~~~~ 139 (212)
T 1jay_A 64 ACDIAVLTIP--WEHAIDTARDLKNILR-EKIVVSPLVPVSRGAKGFTYSSERSAAEIVAEVLE-SEKVVSALHTIPAAR 139 (212)
T ss_dssp HCSEEEECSC--HHHHHHHHHHTHHHHT-TSEEEECCCCEECCTTCCEECCSSCHHHHHHHHHT-CSCEEECCTTCCHHH
T ss_pred cCCEEEEeCC--hhhHHHHHHHHHHHcC-CCEEEEcCCCcCcCCceeecCCCCcHHHHHHHhCC-CCeEEEEccchHHHH
Confidence 8999999999 5556688888877774 888888888766 567776665 36788776543321
Q ss_pred ------CCCeeEEecCCCCCHHHHHHHHHHHHHc-CCeeEEEcC
Q 004972 449 ------VMPLLEIVRTERTSAQVILDLMTVGKII-KKVPVVVGN 485 (721)
Q Consensus 449 ------~~~lvEiv~~~~t~~e~~~~~~~l~~~l-G~~~v~v~d 485 (721)
...+..+++++ +++.++.+.++++.+ |+.++++++
T Consensus 140 ~~~~~~~~~~~~~~~g~--~~~~~~~v~~l~~~~~G~~~~~~~~ 181 (212)
T 1jay_A 140 FANLDEKFDWDVPVCGD--DDESKKVVMSLISEIDGLRPLDAGP 181 (212)
T ss_dssp HHCTTCCCCEEEEEEES--CHHHHHHHHHHHHHSTTEEEEEEES
T ss_pred hhCcCCCCCccEEEECC--cHHHHHHHHHHHHHcCCCCceeccc
Confidence 22345566665 689999999999999 999999976
No 154
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=99.31 E-value=2.5e-12 Score=140.85 Aligned_cols=86 Identities=15% Similarity=0.122 Sum_probs=77.0
Q ss_pred ChHHHHHHHHHHHHHHHHHHh-hcCcCCChhHHHHHHHHccCCCCCCCcHhHHHHHhCHHHHHHHHHHHHHhhCCCCCCC
Q 004972 616 TEKEIVEMILFPVVNESCRVL-EEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPS 694 (721)
Q Consensus 616 ~~~~i~~r~~~~~~~ea~~~l-~~gv~~~~~~iD~~~~~g~g~~~~~~Gp~~~~d~~G~~~~~~~~~~~~~~~~~~~~p~ 694 (721)
.+++++||++.++++||+.++ ++| + ++++||.++. ++|||+ |||+++|.+|+|+.+.+++.+ .+.|+
T Consensus 232 ~pGfi~Nril~~~~~EA~~l~~~~G-a-~~e~ID~a~~-~~G~pm---GPf~l~D~vGlD~~~~i~~~~------~~~~~ 299 (460)
T 3k6j_A 232 CKSFVFNRLLHVYFDQSQKLMYEYG-Y-LPHQIDKIIT-NFGFLM---GPMTVADMNGFDVMEKLKKEN------GLEPN 299 (460)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTSC-C-CHHHHHHHHH-HHTBSS---CHHHHHHHHCTHHHHHHHHHS------CCCCC
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHcC-C-CHHHHHHHHH-HcCCCc---CHHHHHHHhchHHHHHHHHHh------ccCch
Confidence 579999999999999999999 777 5 8999999998 999999 999999999999999988765 24567
Q ss_pred HHHHHHH-------HcCCCCcCCCCC
Q 004972 695 RFLEERA-------TKGIPLSAPVSS 713 (721)
Q Consensus 695 ~~l~~~~-------~~g~~f~~~~~~ 713 (721)
++|++|+ |+|+|||+|++.
T Consensus 300 ~~l~~~v~~G~lG~KtG~GFY~y~~~ 325 (460)
T 3k6j_A 300 PIEKEMWRLKRYGRKTNKGFYKYDDK 325 (460)
T ss_dssp HHHHHHHHTTCCBGGGTBSSSEECTT
T ss_pred HHHHHHHHCCCCeeecCCEEEECCCC
Confidence 9999999 789999999653
No 155
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=99.29 E-value=1.1e-11 Score=138.09 Aligned_cols=194 Identities=12% Similarity=0.062 Sum_probs=131.0
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cccC-
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK- 383 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~- 383 (721)
+||+|||+|.||+.+|..|+++|++|++||+++++++...+.. |... . ...+..++++ +.++
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~----------g~~~-~-----~~~i~~~~~~~e~v~~ 65 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKAN----------ASAP-F-----AGNLKAFETMEAFAAS 65 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHT----------TTST-T-----GGGEEECSCHHHHHHH
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc----------CCCC-C-----CCCeEEECCHHHHHhc
Confidence 3799999999999999999999999999999999877653210 1000 0 0135556666 3333
Q ss_pred --CCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCH--HHHhcccCC-CCcEEEecCCCCC---CCCCeeEE
Q 004972 384 --DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--NIVGEKTSS-QDRIIGAHFFSPA---HVMPLLEI 455 (721)
Q Consensus 384 --~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i--~~l~~~~~~-~~r~ig~h~~~p~---~~~~lvEi 455 (721)
++|+||+|||.... ...+++++.+.++++++|++.+++.+. ..+.+.+.. ...+++.....++ ..++ .+
T Consensus 66 l~~aDvVilaVp~~~~-v~~vl~~l~~~l~~g~iIId~sng~~~~~~~l~~~l~~~g~~~v~~pv~gg~~~a~~g~--~i 142 (478)
T 1pgj_A 66 LKKPRKALILVQAGAA-TDSTIEQLKKVFEKGDILVDTGNAHFKDQGRRAQQLEAAGLRFLGMGISGGEEGARKGP--AF 142 (478)
T ss_dssp BCSSCEEEECCCCSHH-HHHHHHHHHHHCCTTCEEEECCCCCHHHHHHHHHHHHTTTCEEEEEEEESHHHHHHHCC--EE
T ss_pred ccCCCEEEEecCChHH-HHHHHHHHHhhCCCCCEEEECCCCChHHHHHHHHHHHHCCCeEEEeeccCCHHHHhcCC--eE
Confidence 59999999995544 456678899999999988876666543 344444432 3345554322211 1122 23
Q ss_pred ecCCCCCHHHHHHHHHHHHHcCCe-------eEEEcCC-Cc----hhhhhhh---hHHHHHHHHHHHc-CCCHHHHHHHH
Q 004972 456 VRTERTSAQVILDLMTVGKIIKKV-------PVVVGNC-TG----FAVNRAF---FPYSQSARLLVSL-GVDVFRIDSAI 519 (721)
Q Consensus 456 v~~~~t~~e~~~~~~~l~~~lG~~-------~v~v~d~-~g----fi~nRl~---~~~~~Ea~~l~~~-Gv~~~~ID~a~ 519 (721)
+.+. +++..+.+.++++.+|.. ++++++. .| ++.|.+. ...++|++.+++. |++++++..++
T Consensus 143 ~~gg--~~~~~~~v~~ll~~~g~~~~dg~~~v~~~g~~G~g~~~Kl~~N~~~~~~~~~i~Ea~~l~~~~G~~~~~~~~l~ 220 (478)
T 1pgj_A 143 FPGG--TLSVWEEIRPIVEAAAAKADDGRPCVTMNGSGGAGSCVKMYHNSGEYAILQIWGEVFDILRAMGLNNDEVAAVL 220 (478)
T ss_dssp EEEE--CHHHHHHHHHHHHHHSCBCTTSCBSCCCCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred eccC--CHHHHHHHHHHHHHhcccccCCCeeEEEeCCchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 4432 689999999999999987 5666542 22 2346553 3457899988877 89999998887
Q ss_pred H
Q 004972 520 R 520 (721)
Q Consensus 520 ~ 520 (721)
.
T Consensus 221 ~ 221 (478)
T 1pgj_A 221 E 221 (478)
T ss_dssp H
T ss_pred H
Confidence 3
No 156
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=99.29 E-value=1.6e-11 Score=124.83 Aligned_cols=167 Identities=13% Similarity=0.080 Sum_probs=103.7
Q ss_pred CceeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHH-HHHH-HHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCccc
Q 004972 304 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEY-LLKG-IKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE 381 (721)
Q Consensus 304 ~~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~-~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 381 (721)
..+||+|||+|.||.+||..|+++|++|++||++++. +... .... +.....+.....+.+..++..+.
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~e~ 87 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPKATLARAEPDAM----------GAPPFSQWLPEHPHVHLAAFADV 87 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHTCC-----------------CCHHHHGGGSTTCEEEEHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChhhhhhhhhhhhh----------cchhhhHHHhhcCceeccCHHHH
Confidence 4579999999999999999999999999999999986 1110 0000 00000000111122333333466
Q ss_pred cCCCCEEEEcccCChHHHHHHHHHH-HhhCCCCeEEEecCCCC----------------CH-HHHhcccCCCCcEEE-ec
Q 004972 382 FKDVDMVIEAVIESVPLKQKIFSEL-EKACPPHCILATNTSTI----------------DL-NIVGEKTSSQDRIIG-AH 442 (721)
Q Consensus 382 l~~aDlVIeavpe~~~~k~~v~~~l-~~~~~~~~ii~s~ts~~----------------~i-~~l~~~~~~~~r~ig-~h 442 (721)
+++||+||+||| .....+++.++ .+.+ ++++|++.+.++ .+ ..+++.++ ..+++. ++
T Consensus 88 ~~~aDvVilavp--~~~~~~~~~~i~~~~l-~g~ivi~~s~~~~~~~G~~~t~~~~~~~~~~~~l~~~l~-~~~vv~~~~ 163 (245)
T 3dtt_A 88 AAGAELVVNATE--GASSIAALTAAGAENL-AGKILVDIANPLDFSHGMPPTLNPVNTDSLGEQIQRTFP-EAKVVKTLN 163 (245)
T ss_dssp HHHCSEEEECSC--GGGHHHHHHHHCHHHH-TTSEEEECCCCEECTTCSSCEESSCSSCCHHHHHHHHST-TSEEEECST
T ss_pred HhcCCEEEEccC--cHHHHHHHHHhhhhhc-CCCEEEECCCCCCCcCCccccccCCCCccHHHHHHHHCC-CCeEEEeec
Confidence 789999999999 44445677777 6666 677887766322 23 34444443 345554 44
Q ss_pred CCCCC--------CCCCeeEEecCCCCCHHHHHHHHHHHHHcCCe-eEEEcCC
Q 004972 443 FFSPA--------HVMPLLEIVRTERTSAQVILDLMTVGKIIKKV-PVVVGNC 486 (721)
Q Consensus 443 ~~~p~--------~~~~lvEiv~~~~t~~e~~~~~~~l~~~lG~~-~v~v~d~ 486 (721)
+...+ ...++.-++.+. ++++.+.+.++++.+|.. ++++++.
T Consensus 164 ~~~a~v~~~~~~a~~g~~~~~v~g~--d~~~~~~v~~ll~~~g~~~~~~~G~~ 214 (245)
T 3dtt_A 164 TMNASLMVDPGRAAGGDHSVFVSGN--DAAAKAEVATLLKSLGHQDVIDLGDI 214 (245)
T ss_dssp TSCHHHHHCGGGTGGGCCCEEEECS--CHHHHHHHHHHHHHTTCCCEEEEESG
T ss_pred ccCHHHhcCccccCCCCeeEEEECC--CHHHHHHHHHHHHHcCCCceeccCcH
Confidence 43211 122333344443 799999999999999976 4778763
No 157
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=99.27 E-value=1e-11 Score=138.62 Aligned_cols=191 Identities=13% Similarity=0.071 Sum_probs=129.8
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCccc-c--
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE-F-- 382 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-l-- 382 (721)
+||+|||+|.||+.+|..|+++|++|++||+++++++...+. . ..| ..+..+++++. +
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~------~--~~g-----------~gi~~~~~~~e~v~~ 63 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLAN------E--AKG-----------TKVLGAHSLEEMVSK 63 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHT------T--TTT-----------SSCEECSSHHHHHHH
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhc------c--ccC-----------CCeEEeCCHHHHHhh
Confidence 479999999999999999999999999999999987765320 0 001 12455666633 3
Q ss_pred -CCCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHH--HHhcccC-CCCcEEEecCCCCCC---CCCeeEE
Q 004972 383 -KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFFSPAH---VMPLLEI 455 (721)
Q Consensus 383 -~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~--~l~~~~~-~~~r~ig~h~~~p~~---~~~lvEi 455 (721)
+++|+||+|||.... ...++.++.+.++++++|++.+++.+.. .+.+.+. ....++++....++. .++ .+
T Consensus 64 l~~aDvVilaVp~~~~-v~~vl~~l~~~l~~g~iII~~s~~~~~~~~~l~~~l~~~g~~~v~~pv~g~~~~a~~g~--~i 140 (482)
T 2pgd_A 64 LKKPRRIILLVKAGQA-VDNFIEKLVPLLDIGDIIIDGGNSEYRDTMRRCRDLKDKGILFVGSGVSGGEDGARYGP--SL 140 (482)
T ss_dssp BCSSCEEEECSCTTHH-HHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHHHHHHHCC--EE
T ss_pred ccCCCEEEEeCCChHH-HHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEeCCCCCCChhhhccCC--eE
Confidence 589999999995444 4567788999999989888776665532 3444332 233455543222111 112 23
Q ss_pred ecCCCCCHHHHHHHHHHHHHcCCee-------EEEcC-CCc----hhhhhhh---hHHHHHHHHHHHc--CCCHHHHHHH
Q 004972 456 VRTERTSAQVILDLMTVGKIIKKVP-------VVVGN-CTG----FAVNRAF---FPYSQSARLLVSL--GVDVFRIDSA 518 (721)
Q Consensus 456 v~~~~t~~e~~~~~~~l~~~lG~~~-------v~v~d-~~g----fi~nRl~---~~~~~Ea~~l~~~--Gv~~~~ID~a 518 (721)
+++. +++..+.+.++++.+|..+ +++++ ..| ++.|.+. ...++|++.+++. |++++++..+
T Consensus 141 ~~gg--~~e~~~~v~~ll~~~g~~v~d~~~~~~~~g~~g~g~~~Kl~~N~~~~~~~~~i~Ea~~l~~~~~G~~~~~~~~~ 218 (482)
T 2pgd_A 141 MPGG--NKEAWPHIKAIFQGIAAKVGTGEPCCDWVGDDGAGHFVKMVHNGIEYGDMQLICEAYHLMKDVLGLGHKEMAKA 218 (482)
T ss_dssp EEEE--CTTTHHHHHHHHHHHSCBCTTSCBSCCCCEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHH
T ss_pred EeCC--CHHHHHHHHHHHHHhhhhccCCCcceEEECCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHH
Confidence 4432 5778899999999999876 45543 222 4556654 3457899988865 8999999988
Q ss_pred HH
Q 004972 519 IR 520 (721)
Q Consensus 519 ~~ 520 (721)
+.
T Consensus 219 ~~ 220 (482)
T 2pgd_A 219 FE 220 (482)
T ss_dssp HH
T ss_pred HH
Confidence 73
No 158
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=99.27 E-value=3.9e-12 Score=137.45 Aligned_cols=170 Identities=12% Similarity=0.020 Sum_probs=106.9
Q ss_pred ceeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cccC
Q 004972 305 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 383 (721)
Q Consensus 305 ~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~ 383 (721)
|+||+|||+|.||+++|..|+++|++|++||++++.++...+.. .....+. . ......+..+++. +.++
T Consensus 15 M~kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~~~~~l~~~~-------~~~~~~~-~--~~~~~~~~~~~~~~~~~~ 84 (366)
T 1evy_A 15 LNKAVVFGSGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKR-------ENVLFLK-G--VQLASNITFTSDVEKAYN 84 (366)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHHHT-------BCTTTST-T--CBCCTTEEEESCHHHHHT
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcC-------ccccccc-c--cccccceeeeCCHHHHHc
Confidence 55999999999999999999999999999999998877653210 0000000 0 0001235556666 4578
Q ss_pred CCCEEEEcccCChHHHHHHHHH----HHhhCCC-CeEEEecCCCCCHHH---HhcccCC--CC-c-EEEecCCCCCC--C
Q 004972 384 DVDMVIEAVIESVPLKQKIFSE----LEKACPP-HCILATNTSTIDLNI---VGEKTSS--QD-R-IIGAHFFSPAH--V 449 (721)
Q Consensus 384 ~aDlVIeavpe~~~~k~~v~~~----l~~~~~~-~~ii~s~ts~~~i~~---l~~~~~~--~~-r-~ig~h~~~p~~--~ 449 (721)
+||+||+||| .....+++.+ +.+.+++ +++|++.++++.+.. +.+.+.. +. . .+...+..+.. .
T Consensus 85 ~aDvVilav~--~~~~~~v~~~~~~gl~~~l~~~~~ivv~~~~gi~~~~~~~~~~~l~~~~~~~~~~v~~gp~~~~~~~~ 162 (366)
T 1evy_A 85 GAEIILFVIP--TQFLRGFFEKSGGNLIAYAKEKQVPVLVCTKGIERSTLKFPAEIIGEFLPSPLLSVLAGPSFAIEVAT 162 (366)
T ss_dssp TCSSEEECCC--HHHHHHHHHHHCHHHHHHHHHHTCCEEECCCSCCTTTCCCHHHHHTTTSCGGGEEEEESSCCHHHHHT
T ss_pred CCCEEEECCC--hHHHHHHHHHhHHHHHHhcCccCCEEEEECCcCCCccccCHHHHHHHHCCCCcEEEEeCCChHHHHHh
Confidence 9999999999 5777888888 8888888 888888776665531 1111110 11 1 11111211110 0
Q ss_pred CCeeEEecCCCCCHHHHHHHHHHHHHc--CCeeEEEcCCC
Q 004972 450 MPLLEIVRTERTSAQVILDLMTVGKII--KKVPVVVGNCT 487 (721)
Q Consensus 450 ~~lvEiv~~~~t~~e~~~~~~~l~~~l--G~~~v~v~d~~ 487 (721)
.....++.+ ..+++..+.+.++++.. |..+.+..|..
T Consensus 163 g~~~~~~~~-~~~~~~~~~v~~ll~~~g~g~~~~~~~di~ 201 (366)
T 1evy_A 163 GVFTCVSIA-SADINVARRLQRIMSTGDRSFVCWATTDTV 201 (366)
T ss_dssp TCCEEEEEE-CSSHHHHHHHHHHHSCTTSSEEEEEESCHH
T ss_pred CCceEEEEe-cCCHHHHHHHHHHhcCCCCeEEEEEcCCch
Confidence 111112222 23678899999999999 77777666643
No 159
>2f9i_A Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; zinc ribbon, crotonase superfamily, spiral domain; 1.98A {Staphylococcus aureus}
Probab=99.26 E-value=3.7e-11 Score=125.87 Aligned_cols=135 Identities=16% Similarity=0.113 Sum_probs=98.4
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccCCCcccccchHHHHHHHHHHhhCCCcEEEEE
Q 004972 26 NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAV 105 (721)
Q Consensus 26 Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~p~Iaav 105 (721)
++++++..+...++++.+++..- -+|.|.-.++++. |.+..+. . ........+ ..+.++++|+||+|
T Consensus 139 G~~~~~~~~Ka~r~~~~A~~~~~-PlI~lvdt~Ga~~-g~~ae~~------g----~~~~~a~~l-~al~~~~vPvIavV 205 (327)
T 2f9i_A 139 GMAHPEGYRKALRLMKQAEKFNR-PIFTFIDTKGAYP-GKAAEER------G----QSESIATNL-IEMASLKVPVIAIV 205 (327)
T ss_dssp GCCCHHHHHHHHHHHHHHHHTTC-CEEEEEEESCSCC-CHHHHHT------T----HHHHHHHHH-HHHHTCSSCEEEEE
T ss_pred CCCCHHHHHHHHHHHHHHhhcCC-CEEEEEeCCCCCc-chhhhhh------h----hHHHHHHHH-HHHHhCCCCEEEEE
Confidence 68999999999999998886643 4455543222222 2211110 0 112333455 56889999999999
Q ss_pred CCcccccchHhhhhcCEEEeeCCceEeCcccccCcccc---ccccccccCHHHHHHHHHcCCCcCHHHHHHcCCccEEcC
Q 004972 106 EGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 182 (721)
Q Consensus 106 ~G~a~GgG~~lalacD~ria~~~a~~~~pe~~~Gl~P~---~~~l~r~~G~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~ 182 (721)
+|.|.|||+.++++||++||.++++|++ +.|. +..+.+..+...+.++ ..++|++|+++|+||+|+|
T Consensus 206 ~G~a~GGGa~~~~~~D~via~~~A~~~v------~~peg~a~il~~~~~~a~~A~e~----~~itA~~a~~~GlVd~VV~ 275 (327)
T 2f9i_A 206 IGEGGSGGALGIGIANKVLMLENSTYSV------ISPEGAAALLWKDSNLAKIAAET----MKITAHDIKQLGIIDDVIS 275 (327)
T ss_dssp EEEEBHHHHHTTCCCSEEEEETTCBCBS------SCHHHHHHHHSSCGGGHHHHHHH----HTCBHHHHHHTTSSSEEEC
T ss_pred ECCcChHHHHHHHCCCEEEEcCCceEee------cCchHHHHHHHHHhcchHHHHHH----cCCCHHHHHHcCCceEEec
Confidence 9999999999999999999999999986 2343 4444455555777776 7799999999999999998
Q ss_pred C
Q 004972 183 S 183 (721)
Q Consensus 183 ~ 183 (721)
.
T Consensus 276 e 276 (327)
T 2f9i_A 276 E 276 (327)
T ss_dssp C
T ss_pred C
Confidence 4
No 160
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=99.26 E-value=7.8e-12 Score=132.47 Aligned_cols=122 Identities=17% Similarity=0.236 Sum_probs=90.1
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCC-ceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCccccCC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 384 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~ 384 (721)
+||+|||+|.||.++|..++..|+ +|++||++++.++.....+.+...... ...+++.+++++++++
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~------------~~~~i~~t~d~~al~~ 82 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIG------------SPAKIFGENNYEYLQN 82 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHT------------CCCCEEEESCGGGGTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccC------------CCCEEEECCCHHHHCC
Confidence 589999999999999999999999 999999999988864433333322110 1246888888888999
Q ss_pred CCEEEEcc--cC------------ChHHHHHHHHHHHhhCCCCeEE--EecCCCCCHHHHhcccC--CCCcEEEe
Q 004972 385 VDMVIEAV--IE------------SVPLKQKIFSELEKACPPHCIL--ATNTSTIDLNIVGEKTS--SQDRIIGA 441 (721)
Q Consensus 385 aDlVIeav--pe------------~~~~k~~v~~~l~~~~~~~~ii--~s~ts~~~i~~l~~~~~--~~~r~ig~ 441 (721)
||+||+++ |+ +..+++++++++.+++ +++++ +||++... +.++.... +|+|++|+
T Consensus 83 aD~VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~-p~a~viv~tNP~~~~-t~~~~~~~~~~~~rviG~ 155 (328)
T 2hjr_A 83 SDVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYC-PNAFVICITNPLDAM-VYYFKEKSGIPANKVCGM 155 (328)
T ss_dssp CSEEEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHC-TTCEEEECCSSHHHH-HHHHHHHHCCCGGGEEES
T ss_pred CCEEEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHC-CCeEEEEecCchHHH-HHHHHHhcCCChhhEEEe
Confidence 99999998 54 4577999999999998 55655 46655432 34443333 56777774
No 161
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=99.25 E-value=1.7e-11 Score=121.52 Aligned_cols=135 Identities=13% Similarity=0.084 Sum_probs=102.1
Q ss_pred CceeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCccccC
Q 004972 304 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 383 (721)
Q Consensus 304 ~~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~ 383 (721)
..+||+|||+|.||+++|..|++.|++|++||++++ .++
T Consensus 18 ~~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~-----------------------------------------~~~ 56 (209)
T 2raf_A 18 QGMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ-----------------------------------------ATT 56 (209)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC-----------------------------------------CSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH-----------------------------------------Hhc
Confidence 356899999999999999999999999999998754 357
Q ss_pred CCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCC---------------HHHHhcccCCCCcEEE-ecCCCCC
Q 004972 384 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID---------------LNIVGEKTSSQDRIIG-AHFFSPA 447 (721)
Q Consensus 384 ~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~---------------i~~l~~~~~~~~r~ig-~h~~~p~ 447 (721)
+||+||+|+| ....+++++++.+.++ ++++++.+++++ ...+++.++ ..+++. .|+...|
T Consensus 57 ~aD~vi~av~--~~~~~~v~~~l~~~~~-~~~vi~~~~g~~~~~~~~l~~~~~~~~~~~l~~~l~-~~~vv~~~~~~~~p 132 (209)
T 2raf_A 57 LGEIVIMAVP--YPALAALAKQYATQLK-GKIVVDITNPLNFDTWDDLVVPADSSAAQELQQQLP-DSQVLKAFNTTFAA 132 (209)
T ss_dssp CCSEEEECSC--HHHHHHHHHHTHHHHT-TSEEEECCCCBCTTTSSSBSSCTTCCHHHHHHHHCT-TSEEEECSTTSCHH
T ss_pred cCCEEEEcCC--cHHHHHHHHHHHHhcC-CCEEEEECCCCCccccccccCCCCCcHHHHHHHHCC-CCcEEEeeecccHh
Confidence 8999999999 6667788898888888 888888777665 344555443 457777 6664322
Q ss_pred CC--------CCeeEEecCCCCCHHHHHHHHHHHHHcCCeeEEEcC
Q 004972 448 HV--------MPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 485 (721)
Q Consensus 448 ~~--------~~lvEiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d 485 (721)
.. .+..-++.+ .+++..+.+.++++.+|..++.+++
T Consensus 133 ~~~~~~~~g~~~~~~~~~g--~~~~~~~~v~~ll~~~G~~~~~~~~ 176 (209)
T 2raf_A 133 TLQSGQVNGKEPTTVLVAG--NDDSAKQRFTRALADSPLEVKDAGK 176 (209)
T ss_dssp HHHHSEETTTEECEEEEEE--SCHHHHHHHHHHTTTSSCEEEEEES
T ss_pred hccccccCCCCCceeEEcC--CCHHHHHHHHHHHHHcCCceEeCCC
Confidence 11 112222333 3689999999999999999999887
No 162
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=99.24 E-value=8.6e-11 Score=128.21 Aligned_cols=197 Identities=17% Similarity=0.169 Sum_probs=124.7
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHh----hcCceeccCc-c
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA----LKMLKGVLDY-S 380 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~----~~~i~~~~~~-~ 380 (721)
+||+|||+|.||.++|..|++ |++|++||+++++++...+. ...+.....+.. ..++.+++++ +
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~~~~~~l~~~----------~~~i~e~~l~~~~~~~~~~l~~t~~~~~ 69 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-QNEVTIVDILPSKVDKINNG----------LSPIQDEYIEYYLKSKQLSIKATLDSKA 69 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TSEEEEECSCHHHHHHHHTT----------CCSSCCHHHHHHHHHSCCCEEEESCHHH
T ss_pred CEEEEECCCHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHcC----------CCCcCCCCHHHHHHhccCcEEEeCCHHH
Confidence 389999999999999999999 99999999999987764321 001111111111 1246777776 5
Q ss_pred ccCCCCEEEEcccCCh---------HHHHHHHHHHHhhCCCCeEEEe-cCCCCCH-HHHhcccCCCCcEEEecCCCCCCC
Q 004972 381 EFKDVDMVIEAVIESV---------PLKQKIFSELEKACPPHCILAT-NTSTIDL-NIVGEKTSSQDRIIGAHFFSPAHV 449 (721)
Q Consensus 381 ~l~~aDlVIeavpe~~---------~~k~~v~~~l~~~~~~~~ii~s-~ts~~~i-~~l~~~~~~~~r~ig~h~~~p~~~ 449 (721)
.+++||+||.|||... ....++++++.+ ++++++|+. +|.+... ..+.+.+... .+... |...
T Consensus 70 ~~~~aDvviiavpt~~~~~~~~~dl~~v~~v~~~i~~-l~~~~iVV~~ST~~~g~~~~l~~~~~~~--~v~~~---Pe~~ 143 (402)
T 1dlj_A 70 AYKEAELVIIATPTNYNSRINYFDTQHVETVIKEVLS-VNSHATLIIKSTIPIGFITEMRQKFQTD--RIIFS---PEFL 143 (402)
T ss_dssp HHHHCSEEEECCCCCEETTTTEECCHHHHHHHHHHHH-HCSSCEEEECSCCCTTHHHHHHHHTTCS--CEEEC---CCCC
T ss_pred HhcCCCEEEEecCCCcccCCCCccHHHHHHHHHHHHh-hCCCCEEEEeCCCCccHHHHHHHHhCCC--eEEEC---Cccc
Confidence 6789999999999753 257788888888 888888775 4444333 3444444322 22222 2222
Q ss_pred CCe------e---EEecCCCCC-----HHHHHHHHHHHHHcC-C-e-eEEEcCCC-----chhhhhh---hhHHHHHHHH
Q 004972 450 MPL------L---EIVRTERTS-----AQVILDLMTVGKIIK-K-V-PVVVGNCT-----GFAVNRA---FFPYSQSARL 504 (721)
Q Consensus 450 ~~l------v---Eiv~~~~t~-----~e~~~~~~~l~~~lG-~-~-~v~v~d~~-----gfi~nRl---~~~~~~Ea~~ 504 (721)
.+. . .++.|.... .+..+.+.+++..-+ . . ++++++.. .++.|-+ ..+++||+..
T Consensus 144 ~~G~a~~~~~~~~riviG~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~di~~ae~~Kl~~N~~~a~~ia~~nE~~~ 223 (402)
T 1dlj_A 144 RESKALYDNLYPSRIIVSCEENDSPKVKADAEKFALLLKSAAKKNNVPVLIMGASEAEAVKLFANTYLALRVAYFNELDT 223 (402)
T ss_dssp CTTSTTHHHHSCSCEEEECCTTSCHHHHHHHHHHHHHHHHHCSCSCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCcchhhcccCCCEEEEeCCCcccchhHHHHHHHHHHHhhhhccCCceEEecChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111 1 133333221 155677777776533 2 2 56666522 2444544 2567899999
Q ss_pred HHHc-CCCHHHHHHHH
Q 004972 505 LVSL-GVDVFRIDSAI 519 (721)
Q Consensus 505 l~~~-Gv~~~~ID~a~ 519 (721)
+++. |+++.++-.++
T Consensus 224 l~~~~Gid~~~v~~~~ 239 (402)
T 1dlj_A 224 YAESRKLNSHMIIQGI 239 (402)
T ss_dssp HHHHTTCCHHHHHHHH
T ss_pred HHHHhCCCHHHHHHHh
Confidence 9987 99999999888
No 163
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=99.23 E-value=8.7e-12 Score=145.43 Aligned_cols=89 Identities=15% Similarity=0.162 Sum_probs=74.3
Q ss_pred ChHHHHHHHHHHHHHHHHHHhhcCcCCChhHHHHHHHHccCCCCCCCcHhHHHHHhCHHHHHHHHHHHHHhhCCC-CCCC
Q 004972 616 TEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF-FKPS 694 (721)
Q Consensus 616 ~~~~i~~r~~~~~~~ea~~~l~~gv~~~~~~iD~~~~~g~g~~~~~~Gp~~~~d~~G~~~~~~~~~~~~~~~~~~-~~p~ 694 (721)
+++++.||++.++++|++.++++| + ++++||.++ .++|||+ |||+++|.+|+|+.+++++.+++.++++ |.|
T Consensus 493 ~~Gfi~Nril~~~~~Ea~~l~~~G-~-~~e~id~~~-~~~g~p~---Gp~~l~D~vGld~~~~i~~~~~~~~~~~~~~~- 565 (725)
T 2wtb_A 493 CTGFAVNRMFFPYTQAAMFLVECG-A-DPYLIDRAI-SKFGMPM---GPFRLCDLVGFGVAIATATQFIENFSERTYKS- 565 (725)
T ss_dssp STTTTHHHHHHHHHHHHHHHHHTT-C-CHHHHHHHH-HHHTCSS---CHHHHHHHHCHHHHHHHHHHHHHHSGGGCCCC-
T ss_pred CccHHHHHHHHHHHHHHHHHHHCC-C-CHHHHHHHH-HHcCCCC---CHHHHHHHhchHHHHHHHHHHHHhcCCccCCh-
Confidence 368899999999999999999999 5 799999999 8999998 9999999999999999999999888877 888
Q ss_pred HHHHHHH-------HcCCCCcCCC
Q 004972 695 RFLEERA-------TKGIPLSAPV 711 (721)
Q Consensus 695 ~~l~~~~-------~~g~~f~~~~ 711 (721)
+++++|+ |+|+|||+|+
T Consensus 566 ~~l~~~v~~g~lG~k~g~GfY~y~ 589 (725)
T 2wtb_A 566 MIIPLMQEDKRAGEATRKGFYLYD 589 (725)
T ss_dssp THHHHHHTTC--------------
T ss_pred HHHHHHHHCCCceecCCceeEeCC
Confidence 9999999 7899999994
No 164
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=99.22 E-value=1e-11 Score=123.70 Aligned_cols=151 Identities=13% Similarity=0.125 Sum_probs=102.0
Q ss_pred CceeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCccccC
Q 004972 304 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 383 (721)
Q Consensus 304 ~~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~ 383 (721)
.++||+|||+|.||..++..|++.|++|+++|++++.++... +.| +..++..+.++
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~-----------~~g-------------~~~~~~~~~~~ 82 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSGFKVVVGSRNPKRTARLF-----------PSA-------------AQVTFQEEAVS 82 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHS-----------BTT-------------SEEEEHHHHTT
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----------HcC-------------CceecHHHHHh
Confidence 356899999999999999999999999999999988765431 111 22232225578
Q ss_pred CCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHh----------cccCCCCcEEEe-cCCC-----C-
Q 004972 384 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG----------EKTSSQDRIIGA-HFFS-----P- 446 (721)
Q Consensus 384 ~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~~l~----------~~~~~~~r~ig~-h~~~-----p- 446 (721)
++|+||+|+|. .....+++ +.+.. ++++|++.+++.+++.+. +.++ ..++++. ++.. +
T Consensus 83 ~~DvVi~av~~--~~~~~v~~-l~~~~-~~~~vv~~s~g~~~~~l~~~~~~~~~l~~~l~-~~~vv~~~n~~~~~~~~~~ 157 (215)
T 2vns_A 83 SPEVIFVAVFR--EHYSSLCS-LSDQL-AGKILVDVSNPTEQEHLQHRESNAEYLASLFP-TCTVVKAFNVISAWTLQAG 157 (215)
T ss_dssp SCSEEEECSCG--GGSGGGGG-GHHHH-TTCEEEECCCCCHHHHHHCSSCHHHHHHHHCT-TSEEEEECTTBCHHHHHTC
T ss_pred CCCEEEECCCh--HHHHHHHH-HHHhc-CCCEEEEeCCCcccccccccccHHHHHHHHCC-CCeEEeccccccHhHhccc
Confidence 99999999994 33445554 55555 788899988888776542 3232 2355542 2110 1
Q ss_pred CCCCCeeEEecCCCCCHHHHHHHHHHHHHcCCeeEEEcC
Q 004972 447 AHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 485 (721)
Q Consensus 447 ~~~~~lvEiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d 485 (721)
....+...++.+ .+++.++.+.++++.+|..++++++
T Consensus 158 ~~~g~~~~~~~g--~~~~~~~~v~~ll~~~G~~~~~~g~ 194 (215)
T 2vns_A 158 PRDGNRQVPICG--DQPEAKRAVSEMALAMGFMPVDMGS 194 (215)
T ss_dssp SCSSCCEEEEEE--SCHHHHHHHHHHHHHTTCEEEECCS
T ss_pred ccCCceeEEEec--CCHHHHHHHHHHHHHcCCceEeecc
Confidence 111121122332 3799999999999999999999976
No 165
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=99.22 E-value=1.8e-11 Score=131.53 Aligned_cols=171 Identities=17% Similarity=0.040 Sum_probs=109.9
Q ss_pred CceeEEEEcCCCCcHHHHHHHHHCC-------CceEEEeCCHH-----HHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhc
Q 004972 304 GVRKVAVIGGGLMGSGIATAHILNN-------IYVVLKEVNSE-----YLLKGIKTIEANVRGLVTRGKLTQDKANNALK 371 (721)
Q Consensus 304 ~~~kI~VIG~G~mG~~iA~~la~~G-------~~V~l~d~~~~-----~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 371 (721)
.++||+|||+|.||+++|..|+++| ++|++||++++ .++...+.... ... ..+. ....
T Consensus 7 ~~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~--~~~-~~~~-------~~~~ 76 (354)
T 1x0v_A 7 ASKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHEN--VKY-LPGH-------KLPP 76 (354)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCC--TTT-STTC-------CCCT
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcc--ccc-CCcc-------cCcc
Confidence 3469999999999999999999999 99999999988 65543211000 000 0000 0012
Q ss_pred CceeccCc-cccCCCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCH--------HHH-hcccCCCCcEEEe
Q 004972 372 MLKGVLDY-SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--------NIV-GEKTSSQDRIIGA 441 (721)
Q Consensus 372 ~i~~~~~~-~~l~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i--------~~l-~~~~~~~~r~ig~ 441 (721)
.+..+++. +.+++||+||+||| .....++++++.++++++++|++.++++.+ .+. .+.+..+ ..+..
T Consensus 77 ~~~~~~~~~~~~~~aD~Vilav~--~~~~~~v~~~i~~~l~~~~ivv~~~~Gi~~~~~~~~~l~~~l~~~~~~~-~~v~~ 153 (354)
T 1x0v_A 77 NVVAVPDVVQAAEDADILIFVVP--HQFIGKICDQLKGHLKANATGISLIKGVDEGPNGLKLISEVIGERLGIP-MSVLM 153 (354)
T ss_dssp TEEEESSHHHHHTTCSEEEECCC--GGGHHHHHHHHTTCSCTTCEEEECCCCBCSSSSSCCBHHHHHHHHHTCC-EEEEE
T ss_pred CeEEEcCHHHHHcCCCEEEEeCC--HHHHHHHHHHHHhhCCCCCEEEEECCccCCCCCccccHHHHHHHHcCCC-EEEEE
Confidence 35666666 55789999999999 567889999999999999999988887653 121 2222211 11222
Q ss_pred cCCCCCC--CCCeeEEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCc
Q 004972 442 HFFSPAH--VMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488 (721)
Q Consensus 442 h~~~p~~--~~~lvEiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~~g 488 (721)
.|..+.. ......++.+ ..+++..+.+.++++..|..+.+..|..+
T Consensus 154 gp~~a~~v~~g~~~~~~~~-~~~~~~~~~v~~ll~~~g~~~~~~~di~~ 201 (354)
T 1x0v_A 154 GANIASEVADEKFCETTIG-CKDPAQGQLLKELMQTPNFRITVVQEVDT 201 (354)
T ss_dssp CSCCHHHHHTTCCEEEEEE-CSSHHHHHHHHHHHCBTTEEEEEESCHHH
T ss_pred CCCcHHHHHhcCCceEEEE-ECCHHHHHHHHHHhCCCCEEEEEcCCchH
Confidence 2222111 0111112222 24688899999999999988888777543
No 166
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=99.21 E-value=6e-12 Score=146.71 Aligned_cols=89 Identities=17% Similarity=0.237 Sum_probs=83.8
Q ss_pred hHHHHHHHHHHHHHHHHHHhhcCcCCChhHHHHHHHHccCCCCCCCcHhHHHHHhCHHHHHHHHHHHHHhhCCCCCCC--
Q 004972 617 EKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPS-- 694 (721)
Q Consensus 617 ~~~i~~r~~~~~~~ea~~~l~~gv~~~~~~iD~~~~~g~g~~~~~~Gp~~~~d~~G~~~~~~~~~~~~~~~~~~~~p~-- 694 (721)
++++.||++.++++|++.++++| + ++++||.++ .++|||+ |||+++|.+|+|+.+++++.+++.++++|.|+
T Consensus 496 ~Gfi~Nril~~~~~Ea~~l~~~G-~-~~~~id~~~-~~~G~p~---Gp~~l~D~vGld~~~~i~~~~~~~~~~~~~~~~~ 569 (715)
T 1wdk_A 496 PGFLVNRVLFPYFGGFAKLVSAG-V-DFVRIDKVM-EKFGWPM---GPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRR 569 (715)
T ss_dssp TTTTHHHHHHHHHHHHHHHHHTT-C-CHHHHHHHH-HHHTCSS---CHHHHHHHHCHHHHHHHHHHHHHHCHHHHCCSSC
T ss_pred CChhhhHHHHHHHHHHHHHHHCC-C-CHHHHHHHH-HHcCCCC---CHHHHHHHhhHHHHHHHHHHHHHhcCCccCCChH
Confidence 68899999999999999999999 4 799999999 8999998 99999999999999999999988888889998
Q ss_pred HHHHHHH-------HcCCCCcCCC
Q 004972 695 RFLEERA-------TKGIPLSAPV 711 (721)
Q Consensus 695 ~~l~~~~-------~~g~~f~~~~ 711 (721)
++|++|+ |+|+|||+|.
T Consensus 570 ~~l~~~v~~g~lG~k~g~GfY~y~ 593 (715)
T 1wdk_A 570 SAIDALYEAKRLGQKNGKGFYAYE 593 (715)
T ss_dssp CHHHHHHHTTCCBTTTTBSSSEEC
T ss_pred HHHHHHHhCchhhhcCCcEEEecc
Confidence 9999999 7899999995
No 167
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=99.21 E-value=2.6e-11 Score=140.68 Aligned_cols=120 Identities=14% Similarity=0.155 Sum_probs=97.7
Q ss_pred CHHHHHHHHHHHHHcCCeeEEEcCCCchhhhhhhhHHHHHHHHHHHcCC--CHHHHHHHH-HhcCCCc---cHHHHHHhh
Q 004972 462 SAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGV--DVFRIDSAI-RSFGLPI---GPFQLLDLA 535 (721)
Q Consensus 462 ~~e~~~~~~~l~~~lG~~~v~v~d~~gfi~nRl~~~~~~Ea~~l~~~Gv--~~~~ID~a~-~~~G~p~---Gpf~~~D~~ 535 (721)
+++..+.+..+-+..+...-...+ .-+..|++.+++||+++++++|+ ++.|||.++ .|+|||. |||+++|.+
T Consensus 612 ~~~~~~~~~~~~~~~~~~~~~~~~--~ei~~R~l~~~~nEa~~~l~egI~~~~~diD~a~~~G~Gfp~~~GGp~~~~D~~ 689 (742)
T 3zwc_A 612 DPWLSTFLSQYREVHHIEQRTISK--EEILERCLYSLINEAFRILEEGMAARPEHIDVIYLHGYGWPRHKGGPMFYAASV 689 (742)
T ss_dssp CHHHHHHHHHHHHHHTCCCCCCCH--HHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHSCCCGGGCCHHHHHHHH
T ss_pred ChHHHHHHHHHhhhcCCCcCCCCH--HHHHHHHHHHHHHHHHHHhhcCcCCCHHHHHHHHHhCcCCCCCcCCHHHHHHHH
Confidence 455544444444433322221211 23889999999999999999998 899999999 9999998 999999999
Q ss_pred chHHHHHHHHHHHHhCCC--CCCCcHHHHHHHHcCCCCcccCccccccCC
Q 004972 536 GYGVAAATSKEFDKAFPD--RSFQSPLVDLLLKSGRNGKANGKGLYTYEK 583 (721)
Q Consensus 536 Gld~~~~~~~~l~~~~~~--~~~~~~~l~~~v~~G~~G~k~g~GfY~y~~ 583 (721)
|++.+.+.++.+...+++ ++.|+++|++|+++|....+.++|||.+.+
T Consensus 690 G~~~~v~~l~~l~~~~g~~~~~~P~~~L~~ma~~G~~~f~~~~~~~~~~~ 739 (742)
T 3zwc_A 690 GLPTVLEKLQKYYRQNPDIPQLEPSDYLRRLVAQGSPPLKEWQSLAGPHG 739 (742)
T ss_dssp CHHHHHHHHHHHHHHCTTCGGGSCCHHHHHHHHTTCCCGGGHHHHHSTTC
T ss_pred HHHHHHHHHHHHHHHcCCCCccCCCHHHHHHHHcCCCcccccccccCCCC
Confidence 999999999999999997 455999999999999999999999998764
No 168
>2f9y_A Acetyl-COA carboxylase, carboxyltransferase alpha; zinc ribbon, crotonase superfamily, spiral domain, ligase; 3.20A {Escherichia coli} SCOP: c.14.1.4
Probab=99.21 E-value=7.2e-11 Score=123.99 Aligned_cols=135 Identities=14% Similarity=0.055 Sum_probs=101.6
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccCCCcccccchHHHHHHHHHHhhCCCcEEEEE
Q 004972 26 NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAV 105 (721)
Q Consensus 26 Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~p~Iaav 105 (721)
++++++..+...++++.+.+.. +-+|.|.-.++++. |....+. -........+ ..+.++++|+|++|
T Consensus 153 G~~~~~~~~Ka~r~~~~A~~~~-lPlI~lvDt~Ga~~-g~~aE~~----------g~~~~~a~~l-~al~~~~vPvIavV 219 (339)
T 2f9y_A 153 GMPAPEGYRKALRLMQMAERFK-MPIITFIDTPGAYP-GVGAEER----------GQSEAIARNL-REMSRLGVPVVCTV 219 (339)
T ss_dssp GCCCHHHHHHHHHHHHHHHHTT-CCEEEEEEESCSCC-SHHHHHT----------THHHHHHHHH-HHHHTCSSCEEEEE
T ss_pred CCCCHHHHHHHHHHHHHHhhcC-CCEEEEEeCCCCcc-chHHHHH----------HHHHHHHHHH-HHHHhCCCCEEEEE
Confidence 6899999999999999888664 34555543332222 2211110 0112333455 56889999999999
Q ss_pred CCcccccchHhhhhcCEEEeeCCceEeCcccccCcccc---ccccccccCHHHHHHHHHcCCCcCHHHHHHcCCccEEcC
Q 004972 106 EGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG---TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 182 (721)
Q Consensus 106 ~G~a~GgG~~lalacD~ria~~~a~~~~pe~~~Gl~P~---~~~l~r~~G~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~ 182 (721)
+|.|.|||+.++++||++||.++++|++ +.|. +..+++..+...|.++ ..++|++|+++|+||+|+|
T Consensus 220 ~G~a~GGGa~~~~~~D~via~p~A~~~v------~~Peg~asil~~~~~~~~~Aae~----~~itA~~a~~~GlVd~VV~ 289 (339)
T 2f9y_A 220 IGEGGSGGALAIGVGDKVNMLQYSTYSV------ISPEGCASILWKSADKAPLAAEA----MGIIRPRLKELKLIDSIIP 289 (339)
T ss_dssp EEEEEHHHHHTTCCCSEEEECTTCEEES------SCHHHHHHHHSSCSTTHHHHHHH----HTCSHHHHHTTTSCSCCCC
T ss_pred eCCcCcHHHHHHhccCeeeecCCCEEEe------eccchHHHHHHHhhccHHHHHHH----cCCCHHHHHHcCCeeEEec
Confidence 9999999999999999999999999997 3453 5667777777888887 6799999999999999998
Q ss_pred C
Q 004972 183 S 183 (721)
Q Consensus 183 ~ 183 (721)
.
T Consensus 290 e 290 (339)
T 2f9y_A 290 E 290 (339)
T ss_dssp C
T ss_pred C
Confidence 4
No 169
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=99.20 E-value=2.1e-11 Score=128.66 Aligned_cols=123 Identities=20% Similarity=0.303 Sum_probs=89.5
Q ss_pred ceeEEEEcCCCCcHHHHHHHHHCCC-ceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCccccC
Q 004972 305 VRKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 383 (721)
Q Consensus 305 ~~kI~VIG~G~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~ 383 (721)
++||+|||+|.||.++|..++..|+ +|+++|+++++++.....+.+.+.... ...+++.++++++++
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~------------~~~~i~~t~d~~al~ 71 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAY------------SNCKVSGSNTYDDLA 71 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHT------------CCCCEEEECCGGGGT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcC------------CCcEEEECCCHHHhC
Confidence 4699999999999999999999998 999999999988765444433322111 124577778888899
Q ss_pred CCCEEEEcc--cCCh-----------------HHHHHHHHHHHhhCCCCeEE--EecCCCCCHHHHhcccC--CCCcEEE
Q 004972 384 DVDMVIEAV--IESV-----------------PLKQKIFSELEKACPPHCIL--ATNTSTIDLNIVGEKTS--SQDRIIG 440 (721)
Q Consensus 384 ~aDlVIeav--pe~~-----------------~~k~~v~~~l~~~~~~~~ii--~s~ts~~~i~~l~~~~~--~~~r~ig 440 (721)
+||+||+++ |++. .+++++++++.+++ +++++ +||++.+. +.+..... +|.|++|
T Consensus 72 ~aD~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~tNP~~~~-t~~~~~~~g~~~~rviG 149 (322)
T 1t2d_A 72 GADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNC-PNAFIIVVTNPVDVM-VQLLHQHSGVPKNKIIG 149 (322)
T ss_dssp TCSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEECSSSHHHH-HHHHHHHHCCCGGGEEE
T ss_pred CCCEEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCChHHH-HHHHHHhcCCChHHEEe
Confidence 999999998 6532 37889999999998 56655 45655443 34443333 5667777
Q ss_pred e
Q 004972 441 A 441 (721)
Q Consensus 441 ~ 441 (721)
+
T Consensus 150 ~ 150 (322)
T 1t2d_A 150 L 150 (322)
T ss_dssp C
T ss_pred c
Confidence 4
No 170
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=99.18 E-value=1.7e-11 Score=127.82 Aligned_cols=168 Identities=10% Similarity=-0.060 Sum_probs=109.3
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCccccCCC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 385 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~a 385 (721)
+||+|||+|.||+.+|..|+++|++|++||++++.++.. ...+... ......+. .++.+.++++
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~l-----------~~~~~~~----~~~~~~~~-~~~~~~~~~~ 64 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSV-----------NLVETDG----SIFNESLT-ANDPDFLATS 64 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSEEEE-----------EEECTTS----CEEEEEEE-ESCHHHHHTC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCCEEEEEcCccceeeE-----------EEEcCCC----ceeeeeee-ecCccccCCC
Confidence 379999999999999999999999999999998653321 1111000 00000112 2334567889
Q ss_pred CEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHH-HHhcccCCCCcEE-EecCC-----CCCCC---CCe-eE
Q 004972 386 DMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN-IVGEKTSSQDRII-GAHFF-----SPAHV---MPL-LE 454 (721)
Q Consensus 386 DlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~-~l~~~~~~~~r~i-g~h~~-----~p~~~---~~l-vE 454 (721)
|+||.|+|.. ...++++++.+.++++++|++.++++... .+.+.+. . ++ |.+++ .| .. ... +.
T Consensus 65 d~vi~~v~~~--~~~~v~~~l~~~l~~~~~vv~~~~g~~~~~~l~~~~~--~-~~~g~~~~~~~~~~p-~~~~~~~g~~~ 138 (291)
T 1ks9_A 65 DLLLVTLKAW--QVSDAVKSLASTLPVTTPILLIHNGMGTIEELQNIQQ--P-LLMGTTTHAARRDGN-VIIHVANGITH 138 (291)
T ss_dssp SEEEECSCGG--GHHHHHHHHHTTSCTTSCEEEECSSSCTTGGGTTCCS--C-EEEEEECCEEEEETT-EEEEEECCCEE
T ss_pred CEEEEEecHH--hHHHHHHHHHhhCCCCCEEEEecCCCCcHHHHHHhcC--C-eEEEEEeEccEEcCC-EEEEecccceE
Confidence 9999999944 46788899999999899888877777654 4444432 2 44 44432 23 10 000 11
Q ss_pred EecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCchhhhhhhh
Q 004972 455 IVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFF 496 (721)
Q Consensus 455 iv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~~gfi~nRl~~ 496 (721)
+.+.. .+++.++.+.++++.+|..+++.+|..+...+.+..
T Consensus 139 i~~~~-~~~~~~~~~~~ll~~~g~~~~~~~~~~~~~~~Kl~~ 179 (291)
T 1ks9_A 139 IGPAR-QQDGDYSYLADILQTVLPDVAWHNNIRAELWRKLAV 179 (291)
T ss_dssp EEESS-GGGTTCTHHHHHHHTTSSCEEECTTHHHHHHHHHHH
T ss_pred EccCC-CCcchHHHHHHHHHhcCCCCeecHHHHHHHHHHHee
Confidence 22211 345678889999999999988888866666555543
No 171
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=99.18 E-value=2.8e-11 Score=128.42 Aligned_cols=123 Identities=21% Similarity=0.263 Sum_probs=90.1
Q ss_pred ceeEEEEcCCCCcHHHHHHHHHCCC-ceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCcc-cc
Q 004972 305 VRKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS-EF 382 (721)
Q Consensus 305 ~~kI~VIG~G~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~-~l 382 (721)
.+||+|||+|.||.++|..|+..|+ +|++||+++++++.....+.+.+..+ + ...+++.++|++ ++
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~---~---------~~~~i~~t~d~~ea~ 76 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVV---D---------TNVSVRAEYSYEAAL 76 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHT---T---------CCCCEEEECSHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhcc---C---------CCCEEEEeCCHHHHh
Confidence 4589999999999999999999998 99999999998887544444333211 1 124677888885 79
Q ss_pred CCCCEEEEcc--cCCh-----------------HHHHHHHHHHHhhCCCCeEE--EecCCCCCHHHHhcccC--CCCcEE
Q 004972 383 KDVDMVIEAV--IESV-----------------PLKQKIFSELEKACPPHCIL--ATNTSTIDLNIVGEKTS--SQDRII 439 (721)
Q Consensus 383 ~~aDlVIeav--pe~~-----------------~~k~~v~~~l~~~~~~~~ii--~s~ts~~~i~~l~~~~~--~~~r~i 439 (721)
++||+||+++ |++. .+++++++++.+++ +++++ +||++++. +.++.... .|+|++
T Consensus 77 ~~aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~vi~~tNP~~~~-t~~~~~~~~~~~~rvi 154 (331)
T 1pzg_A 77 TGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYC-PKTFIIVVTNPLDCM-VKVMCEASGVPTNMIC 154 (331)
T ss_dssp TTCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHC-TTCEEEECCSSHHHH-HHHHHHHHCCCGGGEE
T ss_pred CCCCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEEEcCchHHH-HHHHHHhcCCChhcEE
Confidence 9999999999 7654 34889999999998 56665 35555543 34443332 567887
Q ss_pred Ee
Q 004972 440 GA 441 (721)
Q Consensus 440 g~ 441 (721)
|+
T Consensus 155 G~ 156 (331)
T 1pzg_A 155 GM 156 (331)
T ss_dssp EC
T ss_pred ec
Confidence 75
No 172
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=99.16 E-value=1.9e-10 Score=122.54 Aligned_cols=188 Identities=13% Similarity=-0.001 Sum_probs=111.5
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCccccCCC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 385 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~a 385 (721)
+||+|||+|.||+.+|..|+++|++|++||+++++++...+.-.+ ....+. .+ .+..+++.+.++++
T Consensus 15 ~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~~~~~~l~~~g~~----~~~~~~--------~~-~~~~~~~~~~~~~a 81 (335)
T 1z82_A 15 MRFFVLGAGSWGTVFAQMLHENGEEVILWARRKEIVDLINVSHTS----PYVEES--------KI-TVRATNDLEEIKKE 81 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHSCB----TTBTTC--------CC-CSEEESCGGGCCTT
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCCc----ccCCCC--------ee-eEEEeCCHHHhcCC
Confidence 489999999999999999999999999999999887664321000 000000 00 34556666448899
Q ss_pred CEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHH---HhcccC--CCC-cEEEecCCCCCC--CCCeeEEec
Q 004972 386 DMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI---VGEKTS--SQD-RIIGAHFFSPAH--VMPLLEIVR 457 (721)
Q Consensus 386 DlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~~---l~~~~~--~~~-r~ig~h~~~p~~--~~~lvEiv~ 457 (721)
|+||.||| .....+++.++.+ +++++++.++++...+ +++.+. .+. ..+...|..+.. .+....++.
T Consensus 82 DvVil~vk--~~~~~~v~~~l~~---~~~~vv~~~nGi~~~~~~~l~~~~~~~~~~~~~~~~~P~~~~~~~~g~~~~~~~ 156 (335)
T 1z82_A 82 DILVIAIP--VQYIREHLLRLPV---KPSMVLNLSKGIEIKTGKRVSEIVEEILGCPYAVLSGPSHAEEVAKKLPTAVTL 156 (335)
T ss_dssp EEEEECSC--GGGHHHHHTTCSS---CCSEEEECCCCCCTTTCCCHHHHHHHHTCCCEEEEESSCCHHHHHTTCCEEEEE
T ss_pred CEEEEECC--HHHHHHHHHHhCc---CCCEEEEEeCCCCCCccCcHHHHHHHHcCCceEEEECCccHHHHhCCCceEEEE
Confidence 99999999 4666677666544 6778877666655421 221111 011 111222222211 111112222
Q ss_pred CCCCCHHHHHHHHHHHHHcCCeeEEEcCCCc----------------------hhhh---hhhhHHHHHHHHHHHc-CCC
Q 004972 458 TERTSAQVILDLMTVGKIIKKVPVVVGNCTG----------------------FAVN---RAFFPYSQSARLLVSL-GVD 511 (721)
Q Consensus 458 ~~~t~~e~~~~~~~l~~~lG~~~v~v~d~~g----------------------fi~n---Rl~~~~~~Ea~~l~~~-Gv~ 511 (721)
+.. + .+.+.++++..|..+.+..|..| +..| .++...+.|+..+.+. |++
T Consensus 157 g~~-~---~~~~~~ll~~~g~~~~~~~di~~~~~~k~l~N~~~~~~g~~~g~~~~~n~~~a~~~~~~~E~~~la~a~G~~ 232 (335)
T 1z82_A 157 AGE-N---SKELQKRISTEYFRVYTCEDVVGVEIAGALKNVIAIAAGILDGFGGWDNAKAALETRGIYEIARFGMFFGAD 232 (335)
T ss_dssp EET-T---HHHHHHHHCCSSEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred Eeh-h---HHHHHHHhCCCCEEEEecCchHHHHHHHHHHhHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHhCCC
Confidence 211 2 77899999999988877766432 1111 2233456688777765 887
Q ss_pred HHHH
Q 004972 512 VFRI 515 (721)
Q Consensus 512 ~~~I 515 (721)
++++
T Consensus 233 ~~~~ 236 (335)
T 1z82_A 233 QKTF 236 (335)
T ss_dssp HHHH
T ss_pred hhhh
Confidence 7654
No 173
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=99.14 E-value=1e-10 Score=123.41 Aligned_cols=168 Identities=11% Similarity=0.003 Sum_probs=105.8
Q ss_pred CceeEEEEcCCCCcHHHHHHHHHC-----C-CceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHH-HHHHhhcCceec
Q 004972 304 GVRKVAVIGGGLMGSGIATAHILN-----N-IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD-KANNALKMLKGV 376 (721)
Q Consensus 304 ~~~kI~VIG~G~mG~~iA~~la~~-----G-~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~i~~~ 376 (721)
.++||+|||+|.||+.+|..|+++ | ++|++||+ ++.++...+. .|..... .-......+..+
T Consensus 7 ~~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r-~~~~~~l~~~----------~g~~~~~~~~~~~~~~~~~~ 75 (317)
T 2qyt_A 7 QPIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR-GAHLEAIRAA----------GGLRVVTPSRDFLARPTCVT 75 (317)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC-HHHHHHHHHH----------TSEEEECSSCEEEECCSEEE
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc-HHHHHHHHhc----------CCeEEEeCCCCeEEecceEe
Confidence 346899999999999999999999 9 99999999 7665554210 1100000 000000123334
Q ss_pred cCccccCCCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCH-HHHhcccCCCCcEE-EecCCCCCCC-----
Q 004972 377 LDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL-NIVGEKTSSQDRII-GAHFFSPAHV----- 449 (721)
Q Consensus 377 ~~~~~l~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i-~~l~~~~~~~~r~i-g~h~~~p~~~----- 449 (721)
++.+.+.++|+||.|||... ..++++++.+.++++++|++.+.++.. ..+.+.++.. +++ |+.+...+..
T Consensus 76 ~~~~~~~~~D~vil~vk~~~--~~~v~~~i~~~l~~~~~iv~~~nG~~~~~~l~~~l~~~-~v~~g~~~~~a~~~~pg~~ 152 (317)
T 2qyt_A 76 DNPAEVGTVDYILFCTKDYD--MERGVAEIRPMIGQNTKILPLLNGADIAERMRTYLPDT-VVWKGCVYISARKSAPGLI 152 (317)
T ss_dssp SCHHHHCCEEEEEECCSSSC--HHHHHHHHGGGEEEEEEEEECSCSSSHHHHHTTTSCTT-TBCEEEEEEEEEEEETTEE
T ss_pred cCccccCCCCEEEEecCccc--HHHHHHHHHhhcCCCCEEEEccCCCCcHHHHHHHCCCC-cEEEEEEEEEEEEcCCCEE
Confidence 55556789999999998443 478888998888888888887778776 4555555432 332 3322111111
Q ss_pred ---CCeeEE-ecC--CCCCHHHHHHHHHHHHHcCCeeEEEcCC
Q 004972 450 ---MPLLEI-VRT--ERTSAQVILDLMTVGKIIKKVPVVVGNC 486 (721)
Q Consensus 450 ---~~lvEi-v~~--~~t~~e~~~~~~~l~~~lG~~~v~v~d~ 486 (721)
.....+ +.. ...+++.+ .+.++++..|..+.+.+|.
T Consensus 153 ~~~~~g~~~~ig~~~~~~~~~~~-~~~~ll~~~g~~~~~~~di 194 (317)
T 2qyt_A 153 TLEADRELFYFGSGLPEQTDDEV-RLAELLTAAGIRAYNPTDI 194 (317)
T ss_dssp EEEEEEEEEEEECCSSSCCHHHH-HHHHHHHHTTCCEECCSCH
T ss_pred EEcCCCceEEEcCCCCCCcCHHH-HHHHHHHHCCCCCEEchHH
Confidence 111112 322 33457777 8999999999887777663
No 174
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=99.12 E-value=1.5e-10 Score=123.31 Aligned_cols=163 Identities=13% Similarity=0.048 Sum_probs=105.5
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeC--CHHHHHHHHHHHHHHHHhhhhcCC-CCHHHHHHhhcCceecc--Cc-
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEV--NSEYLLKGIKTIEANVRGLVTRGK-LTQDKANNALKMLKGVL--DY- 379 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~--~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~i~~~~--~~- 379 (721)
+||+|||+|.||+.+|..|+++|++|++||+ +++.++...+ .+. +... .. ...+..++ ++
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~-----------~~~~~~~g--~~-~~~~~~~~~~~~~ 66 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISA-----------GREHPRLG--VK-LNGVEIFWPEQLE 66 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHT-----------TCCBTTTT--BC-CCSEEEECGGGHH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEEccCCHHHHHHHHH-----------hCcCcccC--cc-ccceEEecHHhHH
Confidence 3799999999999999999999999999999 8887665421 111 0000 00 02234454 55
Q ss_pred cccCCCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCC---C---HHHHhcccCC--CCcEEEecCCCCCCC--
Q 004972 380 SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI---D---LNIVGEKTSS--QDRIIGAHFFSPAHV-- 449 (721)
Q Consensus 380 ~~l~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~---~---i~~l~~~~~~--~~r~ig~h~~~p~~~-- 449 (721)
+.+++||+||.||| .....+++.++.+ ++++++|++.++++ + ...+.+.+.. +....+.....|...
T Consensus 67 ~~~~~~D~vi~~v~--~~~~~~v~~~i~~-l~~~~~vv~~~ng~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~p~~~~~ 143 (335)
T 1txg_A 67 KCLENAEVVLLGVS--TDGVLPVMSRILP-YLKDQYIVLISKGLIDFDNSVLTVPEAVWRLKHDLRERTVAITGPAIARE 143 (335)
T ss_dssp HHHTTCSEEEECSC--GGGHHHHHHHHTT-TCCSCEEEECCCSEEEETTEEEEHHHHHHTTSTTCGGGEEEEESSCCHHH
T ss_pred HHHhcCCEEEEcCC--hHHHHHHHHHHhc-CCCCCEEEEEcCcCccCCCCcCccHHHHHHHhcCCCCcEEEEECCCcHHH
Confidence 45789999999999 4467888899988 88899888877666 2 2344444332 110001111222221
Q ss_pred ---CCeeEEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCC
Q 004972 450 ---MPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 486 (721)
Q Consensus 450 ---~~lvEiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~ 486 (721)
.....++.+. .+++..+.+.++++..|..+.+..|.
T Consensus 144 ~~~g~~~~~~~~~-~~~~~~~~~~~ll~~~g~~~~~~~di 182 (335)
T 1txg_A 144 VAKRMPTTVVFSS-PSESSANKMKEIFETEYFGVEVTTDI 182 (335)
T ss_dssp HHTTCCEEEEEEC-SCHHHHHHHHHHHCBTTEEEEEESCH
T ss_pred HHccCCcEEEEEe-CCHHHHHHHHHHhCCCcEEEEecCch
Confidence 1111233332 36888999999999999888777774
No 175
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=99.11 E-value=1.4e-10 Score=125.59 Aligned_cols=170 Identities=11% Similarity=-0.015 Sum_probs=109.6
Q ss_pred ceeEEEEcCCCCcHHHHHHHHHCC-------CceEEEeCCHH-----HHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcC
Q 004972 305 VRKVAVIGGGLMGSGIATAHILNN-------IYVVLKEVNSE-----YLLKGIKTIEANVRGLVTRGKLTQDKANNALKM 372 (721)
Q Consensus 305 ~~kI~VIG~G~mG~~iA~~la~~G-------~~V~l~d~~~~-----~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 372 (721)
++||+|||+|.||+++|..|+++| ++|++||++++ .++...+. ......+. . ......
T Consensus 21 ~~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~-------~~~~~~~~-~--~~~~~~ 90 (375)
T 1yj8_A 21 PLKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEFVNGERMVDIINNK-------HENTKYLK-G--VPLPHN 90 (375)
T ss_dssp CBCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC---CCHHHHHHHH-------CBCTTTST-T--CBCCTT
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChhhhhHHHHHHHHhc-------CcccccCC-c--ccCcCC
Confidence 468999999999999999999999 99999999987 55443211 00000000 0 001124
Q ss_pred ceeccCc-cccCCCCEEEEcccCChHHHHHHHHHHHh----hCCCCeEEEecCCCCCHH-----HH----hcccCCCCcE
Q 004972 373 LKGVLDY-SEFKDVDMVIEAVIESVPLKQKIFSELEK----ACPPHCILATNTSTIDLN-----IV----GEKTSSQDRI 438 (721)
Q Consensus 373 i~~~~~~-~~l~~aDlVIeavpe~~~~k~~v~~~l~~----~~~~~~ii~s~ts~~~i~-----~l----~~~~~~~~r~ 438 (721)
+..+++. +.+++||+||+||| .....+++.++.+ .+++++++++.++++.+. .+ .+....+ ..
T Consensus 91 i~~~~~~~ea~~~aDvVilav~--~~~~~~vl~~i~~~~~~~l~~~~ivvs~~~Gi~~~~~~~~~l~~~l~~~~~~~-~~ 167 (375)
T 1yj8_A 91 IVAHSDLASVINDADLLIFIVP--CQYLESVLASIKESESIKIASHAKAISLTKGFIVKKNQMKLCSNYISDFLNIP-CS 167 (375)
T ss_dssp EEEESSTHHHHTTCSEEEECCC--HHHHHHHHHHHTC---CCCCTTCEEEECCCSCEEETTEEECHHHHHHHHSSSC-EE
T ss_pred eEEECCHHHHHcCCCEEEEcCC--HHHHHHHHHHHhhhhhccCCCCCEEEEeCCccccCCccccCHHHHHHHHcCCC-EE
Confidence 6666776 55789999999999 6788899999988 888999999888776541 11 1222211 11
Q ss_pred EEecCCCCCC--CCCeeEEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCc
Q 004972 439 IGAHFFSPAH--VMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 488 (721)
Q Consensus 439 ig~h~~~p~~--~~~lvEiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~~g 488 (721)
+...+..+.. ......++.+ ..+++..+.+.++++..|..+.+..|..|
T Consensus 168 v~~gp~~a~~v~~g~~~~~~~~-~~~~~~~~~v~~ll~~~g~~~~~~~di~~ 218 (375)
T 1yj8_A 168 ALSGANIAMDVAMENFSEATIG-GNDKDSLVIWQRVFDLPYFKINCVNETIE 218 (375)
T ss_dssp EEECSCCHHHHHTTCCEEEEEE-CSCHHHHHHHHHHHCBTTEEEEEESCSHH
T ss_pred EEeCCchHHHHHhCCCeEEEEe-cCCHHHHHHHHHHhCCCCeEEEEeCCcHH
Confidence 1112211110 0111122222 23678899999999999988888887654
No 176
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=99.09 E-value=1.6e-10 Score=124.87 Aligned_cols=155 Identities=10% Similarity=0.021 Sum_probs=110.3
Q ss_pred ceeEEEEcCCCCcHHHHHHHHHC------CCceEEEeCCHH-HHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceecc
Q 004972 305 VRKVAVIGGGLMGSGIATAHILN------NIYVVLKEVNSE-YLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL 377 (721)
Q Consensus 305 ~~kI~VIG~G~mG~~iA~~la~~------G~~V~l~d~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~ 377 (721)
++||+|||+|+||.++|..|.++ |++|++.+++.+ ..+.+ .+.|.... .-...+
T Consensus 54 iKkIgIIGlGsMG~AmA~nLr~s~~~~g~G~~ViVg~r~~sks~e~A-----------~e~G~~v~--------d~ta~s 114 (525)
T 3fr7_A 54 IKQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSKSFDEA-----------RAAGFTEE--------SGTLGD 114 (525)
T ss_dssp CSEEEEECCTTHHHHHHHHHHHHHHHTTCCCEEEEEECTTCSCHHHH-----------HHTTCCTT--------TTCEEE
T ss_pred CCEEEEEeEhHHHHHHHHHHHhcccccCCCCEEEEEeCCchhhHHHH-----------HHCCCEEe--------cCCCCC
Confidence 37899999999999999999999 999987776543 22222 12221100 000122
Q ss_pred CccccCCCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhc---ccCCCCcEEEecCCCCCCC-----
Q 004972 378 DYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGE---KTSSQDRIIGAHFFSPAHV----- 449 (721)
Q Consensus 378 ~~~~l~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~~l~~---~~~~~~r~ig~h~~~p~~~----- 449 (721)
..+++++||+||.++| .....+++.++.++++++++| +...++.+..+.+ ..+....++.+||..|.+.
T Consensus 115 ~aEAa~~ADVVILaVP--~~~~~eVl~eI~p~LK~GaIL-s~AaGf~I~~le~~~i~~p~dv~VVrVmPNtPg~~VR~~y 191 (525)
T 3fr7_A 115 IWETVSGSDLVLLLIS--DAAQADNYEKIFSHMKPNSIL-GLSHGFLLGHLQSAGLDFPKNISVIAVCPKGMGPSVRRLY 191 (525)
T ss_dssp HHHHHHHCSEEEECSC--HHHHHHHHHHHHHHSCTTCEE-EESSSHHHHHHHHTTCCCCTTSEEEEEEESSCHHHHHHHH
T ss_pred HHHHHhcCCEEEECCC--hHHHHHHHHHHHHhcCCCCeE-EEeCCCCHHHHhhhcccCCCCCcEEEEecCCCchhHHHHH
Confidence 2267889999999999 555567889999999999985 7788888877664 3333457999999999875
Q ss_pred --C-----CeeE--EecCCCCCHHHHHHHHHHHHHcCCeeE
Q 004972 450 --M-----PLLE--IVRTERTSAQVILDLMTVGKIIKKVPV 481 (721)
Q Consensus 450 --~-----~lvE--iv~~~~t~~e~~~~~~~l~~~lG~~~v 481 (721)
+ ..+. +..+...+.+..+.+..++..+|...+
T Consensus 192 ~~G~~~~g~Gv~~liAv~qd~tgea~e~alala~aiG~~~v 232 (525)
T 3fr7_A 192 VQGKEINGAGINSSFAVHQDVDGRATDVALGWSVALGSPFT 232 (525)
T ss_dssp HHHTTSTTCSCCEEEEEEECSSSCHHHHHHHHHHHTTCSEE
T ss_pred hcccccccCCccEEEEcCCCCCHHHHHHHHHHHHHCCCCee
Confidence 2 2222 334455677889999999999998753
No 177
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=99.09 E-value=5.3e-10 Score=119.08 Aligned_cols=169 Identities=11% Similarity=0.144 Sum_probs=107.9
Q ss_pred ceeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCccccCC
Q 004972 305 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 384 (721)
Q Consensus 305 ~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~ 384 (721)
++||+|||+|.||+.+|..|+++|++|++|+++ +.++... +.|......-......+..+++.+.+.+
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~-~~~~~~~-----------~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLARG-ATLQALQ-----------TAGLRLTEDGATHTLPVRATHDAAALGE 70 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCH-HHHHHHH-----------HTCEEEEETTEEEEECCEEESCHHHHCC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEECh-HHHHHHH-----------HCCCEEecCCCeEEEeeeEECCHHHcCC
Confidence 569999999999999999999999999999995 4544332 1111000000000112445566666789
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCC-------------------HH-HHhcccCCCCcEEE-ecC
Q 004972 385 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID-------------------LN-IVGEKTSSQDRIIG-AHF 443 (721)
Q Consensus 385 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~-------------------i~-~l~~~~~~~~r~ig-~h~ 443 (721)
+|+||.||| .....++++++.++++++++|++.+++++ .. .+.+.++ ..++++ +-+
T Consensus 71 ~D~Vilavk--~~~~~~~~~~l~~~l~~~~~iv~~~nGi~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~-~~~v~~gv~~ 147 (335)
T 3ghy_A 71 QDVVIVAVK--APALESVAAGIAPLIGPGTCVVVAMNGVPWWFFDRPGPLQGQRLQAVDPHGRIAQAIP-TRHVLGCVVH 147 (335)
T ss_dssp CSEEEECCC--HHHHHHHHGGGSSSCCTTCEEEECCSSSCTTTTCSSSTTTTCCCTTTCTTSHHHHHSC-GGGEEEEEEC
T ss_pred CCEEEEeCC--chhHHHHHHHHHhhCCCCCEEEEECCCCccccccccccccccccccCCcHHHHHHhcC-cccEEEEEEE
Confidence 999999999 56677888999999999999998888853 11 3344442 235443 222
Q ss_pred C-----CCCCC---CCeeEEecC--CCCCHHHHHHHHHHHHHcCCeeEEEcCCCch
Q 004972 444 F-----SPAHV---MPLLEIVRT--ERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 489 (721)
Q Consensus 444 ~-----~p~~~---~~lvEiv~~--~~t~~e~~~~~~~l~~~lG~~~v~v~d~~gf 489 (721)
. .|-.. ... .++-| ...+.+..+.+.+++...|....+..|..+.
T Consensus 148 ~~a~~~~pg~v~~~~~g-~~~iG~~~~~~~~~~~~l~~~l~~~g~~~~~~~di~~~ 202 (335)
T 3ghy_A 148 LTCATVSPGHIRHGNGR-RLILGEPAGGASPRLASIAALFGRAGLQAECSEAIQRD 202 (335)
T ss_dssp CCEEESSTTEEEECSCC-EEEEECTTCSCCHHHHHHHHHHHHTTCEEEECSCHHHH
T ss_pred EEEEEcCCcEEEECCCC-eEEEecCCCCcCHHHHHHHHHHHhCCCCcEeCchHHHH
Confidence 1 12111 111 12222 2234577888999999999888777776663
No 178
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=99.09 E-value=6.6e-10 Score=117.41 Aligned_cols=174 Identities=15% Similarity=0.084 Sum_probs=116.5
Q ss_pred CceeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCccccC
Q 004972 304 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 383 (721)
Q Consensus 304 ~~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~ 383 (721)
.++||+|||+|.||+.+|..|+++|++|++| ++++.++...+. ...-... . ......+..+++.+.+.
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~~~~~~i~~~------g~~~~~~-~----~~~~~~~~~~~~~~~~~ 85 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARPQHVQAIEAT------GLRLETQ-S----FDEQVKVSASSDPSAVQ 85 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCHHHHHHHHHH------CEEEECS-S----CEEEECCEEESCGGGGT
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcHhHHHHHHhC------CeEEEcC-C----CcEEEeeeeeCCHHHcC
Confidence 3579999999999999999999999999999 998887765321 0000000 0 00112455667777788
Q ss_pred CCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHH-HHhcccCCCCcEEEec------CCCCCCC---CCee
Q 004972 384 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN-IVGEKTSSQDRIIGAH------FFSPAHV---MPLL 453 (721)
Q Consensus 384 ~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~-~l~~~~~~~~r~ig~h------~~~p~~~---~~lv 453 (721)
++|+||+||| .....++++++.++++++++|++.++++... .+.+.++ .++++.. ...|-.. ....
T Consensus 86 ~~D~vilavk--~~~~~~~l~~l~~~l~~~~~iv~~~nGi~~~~~l~~~~~--~~vl~g~~~~~a~~~gP~~~~~~~~g~ 161 (318)
T 3hwr_A 86 GADLVLFCVK--STDTQSAALAMKPALAKSALVLSLQNGVENADTLRSLLE--QEVAAAVVYVATEMAGPGHVRHHGRGE 161 (318)
T ss_dssp TCSEEEECCC--GGGHHHHHHHHTTTSCTTCEEEEECSSSSHHHHHHHHCC--SEEEEEEEEEEEEEEETTEEEEEEEEE
T ss_pred CCCEEEEEcc--cccHHHHHHHHHHhcCCCCEEEEeCCCCCcHHHHHHHcC--CcEEEEEEEEeEEEcCCeEEEEcCCce
Confidence 9999999999 4567889999999999999999999999884 5555554 4555421 1122211 1111
Q ss_pred EEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCchhhhhhhhH
Q 004972 454 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFP 497 (721)
Q Consensus 454 Eiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~~gfi~nRl~~~ 497 (721)
++-+. .+..+.+.+++...|..+.+..|..+.....++..
T Consensus 162 -~~ig~---~~~~~~l~~~l~~~~~~~~~~~Di~~~~w~Kl~~N 201 (318)
T 3hwr_A 162 -LVIEP---TSHGANLAAIFAAAGVPVETSDNVRGALWAKLILN 201 (318)
T ss_dssp -EEECC---CTTTHHHHHHHHHTTCCEEECSCHHHHHHHHHHHH
T ss_pred -EEEcC---CHHHHHHHHHHHhCCCCcEechHHHHHHHHHHHHH
Confidence 11222 23456788888888888877788776666665443
No 179
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=99.06 E-value=2.2e-10 Score=120.99 Aligned_cols=158 Identities=18% Similarity=0.204 Sum_probs=104.6
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCC--ceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCccccC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 383 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~ 383 (721)
+||+|||+|.||+++|..|+..|+ +|+++|+++++++.....+.+.+. .. . ..++.. ++.++++
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~-~~--~----------~~~i~~-~d~~~~~ 66 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTP-FT--R----------RANIYA-GDYADLK 66 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGG-GS--C----------CCEEEE-CCGGGGT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhh-hc--C----------CcEEEe-CCHHHhC
Confidence 489999999999999999999999 999999999887764433322211 00 0 123444 3577889
Q ss_pred CCCEEEEcccCC--------------hHHHHHHHHHHHhhCCCCeEEE--ecCCCCCHHHHhccc-C-CCCcEEEecCCC
Q 004972 384 DVDMVIEAVIES--------------VPLKQKIFSELEKACPPHCILA--TNTSTIDLNIVGEKT-S-SQDRIIGAHFFS 445 (721)
Q Consensus 384 ~aDlVIeavpe~--------------~~~k~~v~~~l~~~~~~~~ii~--s~ts~~~i~~l~~~~-~-~~~r~ig~h~~~ 445 (721)
+||+||+|++.. ..+++++++++.+++ ++++++ ||++... +.+.... . .+.|++|+
T Consensus 67 ~aDvViiav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-~~~~ii~~tNp~~~~-~~~~~~~~~~~~~rviG~---- 140 (319)
T 1a5z_A 67 GSDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYA-PDSIVIVVTNPVDVL-TYFFLKESGMDPRKVFGS---- 140 (319)
T ss_dssp TCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECSSSHHHH-HHHHHHHHTCCTTTEEEC----
T ss_pred CCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEeCCcHHHH-HHHHHHHhCCChhhEEee----
Confidence 999999999852 246788899999986 455544 3433332 3343332 2 56788776
Q ss_pred CCCCCCeeEEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCchhhh---hhhhHHHH
Q 004972 446 PAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVN---RAFFPYSQ 500 (721)
Q Consensus 446 p~~~~~lvEiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~~gfi~n---Rl~~~~~~ 500 (721)
.|..++......+.+.+|..+ ++.++++.+ ..++++++
T Consensus 141 --------------~t~ld~~r~~~~la~~lgv~~---~~v~~~v~G~hg~~~~p~~s 181 (319)
T 1a5z_A 141 --------------GTVLDTARLRTLIAQHCGFSP---RSVHVYVIGEHGDSEVPVWS 181 (319)
T ss_dssp --------------TTHHHHHHHHHHHHHHHTCCG---GGEECCEEBCSSTTCEECGG
T ss_pred --------------CccHHHHHHHHHHHHHhCcCH---HHceEEEEeCCCCCcccchh
Confidence 356667777777778888544 455555555 44444443
No 180
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=99.05 E-value=2.4e-10 Score=119.31 Aligned_cols=122 Identities=21% Similarity=0.261 Sum_probs=82.9
Q ss_pred CCCCceeEEEEcCCCCcHHHHHHHHHCCC--ceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccC
Q 004972 301 KPRGVRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLD 378 (721)
Q Consensus 301 ~~~~~~kI~VIG~G~mG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~ 378 (721)
...+++||+|||+|.||.++|..++..|+ +|+++|++++....+.+.. + .. ..++..+++
T Consensus 10 ~~~~~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~----~--~~------------~~~i~~t~d 71 (303)
T 2i6t_A 10 ENKTVNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLE----I--FN------------LPNVEISKD 71 (303)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHH----H--HT------------CTTEEEESC
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHh----h--hc------------CCCeEEeCC
Confidence 34456899999999999999999999999 9999999987322222211 0 00 125777788
Q ss_pred ccccCCCCEEEEcc-------------cCChHHHHHHHHHHHhhCCCCeEE--EecCCCCCHHHHhcccC-CCCcEEEe
Q 004972 379 YSEFKDVDMVIEAV-------------IESVPLKQKIFSELEKACPPHCIL--ATNTSTIDLNIVGEKTS-SQDRIIGA 441 (721)
Q Consensus 379 ~~~l~~aDlVIeav-------------pe~~~~k~~v~~~l~~~~~~~~ii--~s~ts~~~i~~l~~~~~-~~~r~ig~ 441 (721)
++++++||+||+++ .++..+++++++++.+++ +++++ +||++......+..... .+.|++|+
T Consensus 72 ~~~l~~aD~Vi~aag~~~pG~tR~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~sNP~~~~t~~~~~~~~~p~~rviG~ 149 (303)
T 2i6t_A 72 LSASAHSKVVIFTVNSLGSSQSYLDVVQSNVDMFRALVPALGHYS-QHSVLLVASQPVEIMTYVTWKLSTFPANRVIGI 149 (303)
T ss_dssp GGGGTTCSEEEECCCC----CCHHHHHHHHHHHHHHHHHHHHHHT-TTCEEEECSSSHHHHHHHHHHHHCCCGGGEEEC
T ss_pred HHHHCCCCEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEcCChHHHHHHHHHHhcCCCHHHeeCC
Confidence 88999999999997 889999999999999998 56655 45543322222222222 35688876
No 181
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=98.53 E-value=5e-11 Score=117.19 Aligned_cols=148 Identities=14% Similarity=0.165 Sum_probs=99.9
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCccccCCC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 385 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~a 385 (721)
+||+|||+|.||..+|..|.+.|++|++||++++ .+... ..+ +..++..+.++++
T Consensus 20 ~~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~-~~~~~-----------~~g-------------~~~~~~~~~~~~a 74 (201)
T 2yjz_A 20 GVVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNPQ-VSSLL-----------PRG-------------AEVLCYSEAASRS 74 (201)
Confidence 5799999999999999999999999999999876 32210 111 1222223567899
Q ss_pred CEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCH--------HHHhcccCCCCcEEEecCCCCCCCCC-ee---
Q 004972 386 DMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--------NIVGEKTSSQDRIIGAHFFSPAHVMP-LL--- 453 (721)
Q Consensus 386 DlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i--------~~l~~~~~~~~r~ig~h~~~p~~~~~-lv--- 453 (721)
|+||.|+|.. ....++ ++... .++++|++.+++++. ..+.+.++. .+++...++.|..... ..
T Consensus 75 DvVilav~~~--~~~~v~-~l~~~-~~~~ivI~~~~G~~~~~~~~~~~~~l~~~~~~-~~vvra~~n~~a~~~~~g~l~g 149 (201)
T 2yjz_A 75 DVIVLAVHRE--HYDFLA-ELADS-LKGRVLIDVSNNQKMNQYPESNAEYLAQLVPG-AHVVKAFNTISAWALQSGTLDA 149 (201)
Confidence 9999999943 344555 45443 467788887777753 334433332 3565555555554332 11
Q ss_pred ---EEecCCCCCHHHHHHHHHHHHHcCCeeEEEcC
Q 004972 454 ---EIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 485 (721)
Q Consensus 454 ---Eiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~d 485 (721)
.++.+. +++..+.+.++++.+|+.++++++
T Consensus 150 ~~~~~~~g~--~~~~~~~v~~ll~~~G~~~~~~G~ 182 (201)
T 2yjz_A 150 SRQVFVCGN--DSKAKDRVMDIARTLGLTPLDQGS 182 (201)
Confidence 233443 578899999999999999999876
No 182
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=98.95 E-value=1.5e-09 Score=114.06 Aligned_cols=100 Identities=14% Similarity=0.238 Sum_probs=74.5
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCC-ceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCccccCC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 384 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~ 384 (721)
+||+|||+|.||.++|..++..|+ +|+++|+++++++.....+.+... ......+++.+++++++++
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~------------~~~~~~~i~~t~d~~a~~~ 70 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASP------------IEGFDVRVTGTNNYADTAN 70 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHH------------HHTCCCCEEEESCGGGGTT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHh------------hcCCCeEEEECCCHHHHCC
Confidence 589999999999999999999997 999999999877643221111100 0011235777788888999
Q ss_pred CCEEEEcc--------------cCChHHHHHHHHHHHhhCCCCeEEEe
Q 004972 385 VDMVIEAV--------------IESVPLKQKIFSELEKACPPHCILAT 418 (721)
Q Consensus 385 aDlVIeav--------------pe~~~~k~~v~~~l~~~~~~~~ii~s 418 (721)
||+||+++ .++..+++++++++.+++ ++++++.
T Consensus 71 aD~Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~vi~ 117 (309)
T 1ur5_A 71 SDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLS-PNAVIIM 117 (309)
T ss_dssp CSEEEECCCC--------CHHHHHHHHHHHHHHHHHGGGC-TTCEEEE
T ss_pred CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEE
Confidence 99999997 344578888999999987 6666543
No 183
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=98.94 E-value=8.2e-09 Score=108.70 Aligned_cols=174 Identities=14% Similarity=0.079 Sum_probs=112.2
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhh-hh--cCCCCHHHHHHhhcCceeccCcccc
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGL-VT--RGKLTQDKANNALKMLKGVLDYSEF 382 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~-~~--~g~~~~~~~~~~~~~i~~~~~~~~l 382 (721)
+||+|||+|.||+.+|..|+++|++|++|++++ .+...+. .. +. .|.. ....+..+++.+.+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~--~~~i~~~------g~~~~~~~g~~-------~~~~~~~~~~~~~~ 67 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD--YEAIAGN------GLKVFSINGDF-------TLPHVKGYRAPEEI 67 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT--HHHHHHT------CEEEEETTCCE-------EESCCCEESCHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc--HHHHHhC------CCEEEcCCCeE-------EEeeceeecCHHHc
Confidence 589999999999999999999999999999986 2332110 00 00 0100 00123345566667
Q ss_pred CCCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCH-HHHhcccCCCCcEEEec------CCCCCC---CCCe
Q 004972 383 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL-NIVGEKTSSQDRIIGAH------FFSPAH---VMPL 452 (721)
Q Consensus 383 ~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i-~~l~~~~~~~~r~ig~h------~~~p~~---~~~l 452 (721)
.++|+||.||| .....++++++.++++++++|++...++.. +.+.+.++. .++++.- ...|-. ..+.
T Consensus 68 ~~~D~vilavk--~~~~~~~l~~l~~~l~~~~~iv~l~nGi~~~~~l~~~~~~-~~v~~~~~~~~a~~~~p~~v~~~~~g 144 (312)
T 3hn2_A 68 GPMDLVLVGLK--TFANSRYEELIRPLVEEGTQILTLQNGLGNEEALATLFGA-ERIIGGVAFLCSNRGEPGEVHHLGAG 144 (312)
T ss_dssp CCCSEEEECCC--GGGGGGHHHHHGGGCCTTCEEEECCSSSSHHHHHHHHTCG-GGEEEEEEEEECCBCSSSEEEECEEE
T ss_pred CCCCEEEEecC--CCCcHHHHHHHHhhcCCCCEEEEecCCCCcHHHHHHHCCC-CcEEEEEEEeeeEEcCCcEEEECCCC
Confidence 89999999998 666678999999999999999999999874 455555542 3444332 112211 1111
Q ss_pred eEEe-cCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCchhhhhhhhH
Q 004972 453 LEIV-RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFP 497 (721)
Q Consensus 453 vEiv-~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~~gfi~nRl~~~ 497 (721)
.-.+ ..+..+.+..+.+.+++...|....+..|.-+.....++..
T Consensus 145 ~~~ig~~~~~~~~~~~~l~~~l~~~g~~~~~~~di~~~~w~Kl~~N 190 (312)
T 3hn2_A 145 RIILGEFLPRDTGRIEELAAMFRQAGVDCRTTDDLKRARWEKLVWN 190 (312)
T ss_dssp EEEEEESSCCCSHHHHHHHHHHHHTTCCEEECSCHHHHHHHHHHHH
T ss_pred eEEEecCCCCccHHHHHHHHHHHhCCCCcEEChHHHHHHHHHHHHH
Confidence 1122 22334567788899999998888777677655554554433
No 184
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=98.90 E-value=1.8e-09 Score=113.25 Aligned_cols=120 Identities=20% Similarity=0.295 Sum_probs=80.3
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCC--ceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCccccC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 383 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~ 383 (721)
+||+|||+|.||.++|..++..|+ +|+++|+++++++.....+ .... . .. ...++.. +++++++
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l--------~~~~-~---~~-~~~~i~~-~~~~a~~ 66 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDI--------AHAA-P---VS-HGTRVWH-GGHSELA 66 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHH--------TTSC-C---TT-SCCEEEE-ECGGGGT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhh--------hhhh-h---hc-CCeEEEE-CCHHHhC
Confidence 489999999999999999999999 9999999988765321111 1110 0 00 0012333 5678899
Q ss_pred CCCEEEEcc--cC------------ChHHHHHHHHHHHhhCCCCeEEE--ecCCCCCHHHHhcccCCCCcEEEe
Q 004972 384 DVDMVIEAV--IE------------SVPLKQKIFSELEKACPPHCILA--TNTSTIDLNIVGEKTSSQDRIIGA 441 (721)
Q Consensus 384 ~aDlVIeav--pe------------~~~~k~~v~~~l~~~~~~~~ii~--s~ts~~~i~~l~~~~~~~~r~ig~ 441 (721)
+||+||+++ |. +..+++++++++.+++ ++++++ ||++......+.+.. .++|++|+
T Consensus 67 ~aDvVIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~~~vi~~tNP~~~~~~~~~~~~-~~~rviG~ 138 (304)
T 2v6b_A 67 DAQVVILTAGANQKPGESRLDLLEKNADIFRELVPQITRAA-PDAVLLVTSNPVDLLTDLATQLA-PGQPVIGS 138 (304)
T ss_dssp TCSEEEECC------------CHHHHHHHHHHHHHHHHHHC-SSSEEEECSSSHHHHHHHHHHHS-CSSCEEEC
T ss_pred CCCEEEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHhC-CCeEEEEecCchHHHHHHHHHhC-ChhcEEeC
Confidence 999999999 42 4557789999999986 566554 454443333333433 67787775
No 185
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=98.86 E-value=6.1e-09 Score=109.15 Aligned_cols=108 Identities=20% Similarity=0.239 Sum_probs=75.0
Q ss_pred CCCCceeEEEEcCCCCcHHHHHHHHHCCC-ceEEEeCC--HHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceecc
Q 004972 301 KPRGVRKVAVIGGGLMGSGIATAHILNNI-YVVLKEVN--SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL 377 (721)
Q Consensus 301 ~~~~~~kI~VIG~G~mG~~iA~~la~~G~-~V~l~d~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~ 377 (721)
|.++.+||+|||+|.||.++|..++..|+ +|+++|++ ++.++.....+.+.. .......++..++
T Consensus 4 m~~~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~------------~~~~~~~~i~~t~ 71 (315)
T 3tl2_A 4 MTIKRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEAS------------PVQGFDANIIGTS 71 (315)
T ss_dssp CCCCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHH------------HHHTCCCCEEEES
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhh------------hhccCCCEEEEcC
Confidence 44566799999999999999999999999 99999999 444443221121110 0011124577778
Q ss_pred CccccCCCCEEEEcccC--------------ChHHHHHHHHHHHhhCCCCeEEEecCC
Q 004972 378 DYSEFKDVDMVIEAVIE--------------SVPLKQKIFSELEKACPPHCILATNTS 421 (721)
Q Consensus 378 ~~~~l~~aDlVIeavpe--------------~~~~k~~v~~~l~~~~~~~~ii~s~ts 421 (721)
+++++++||+||+++.- +..+.+++.+++.+++ ++++++..|.
T Consensus 72 d~~a~~~aDvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~vlvvsN 128 (315)
T 3tl2_A 72 DYADTADSDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHS-PNAIIVVLTN 128 (315)
T ss_dssp CGGGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECCS
T ss_pred CHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEECCC
Confidence 89999999999999731 3346677777888886 4555554443
No 186
>2cby_A ATP-dependent CLP protease proteolytic subunit 1; serine protease, endopept mycobacterium tuberculosis, ATP-dependent protease; 2.6A {Mycobacterium tuberculosis} SCOP: c.14.1.1 PDB: 2c8t_A 2ce3_A
Probab=98.83 E-value=8.8e-09 Score=101.40 Aligned_cols=142 Identities=18% Similarity=0.155 Sum_probs=98.6
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccCCCcccccchHHHHHHHHHHhhCCCcEEEEEC
Q 004972 27 ALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVE 106 (721)
Q Consensus 27 al~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~p~Iaav~ 106 (721)
.++..+.+.+.+.|..++.++.++.|+|.=. |.|+++.. ...++ +.|..+++||++.+.
T Consensus 35 ~I~~~~a~~i~~~L~~~~~~~~~k~I~l~In----SPGG~v~a----------------~~~I~-~~i~~~~~pV~~~v~ 93 (208)
T 2cby_A 35 EVNDEIANRLCAQILLLAAEDASKDISLYIN----SPGGSISA----------------GMAIY-DTMVLAPCDIATYAM 93 (208)
T ss_dssp CBCHHHHHHHHHHHHHHHHHCSSSCEEEEEE----ECCBCHHH----------------HHHHH-HHHHHCSSCEEEEEE
T ss_pred EECHHHHHHHHHHHHHHHhCCCCCCEEEEEE----CCCCCHHH----------------HHHHH-HHHHhcCCCEEEEEC
Confidence 3788999999999999987776777766421 22232211 22445 668889999999999
Q ss_pred CcccccchHhhhhcCE--EEeeCCceEeCcccccCcccc--c-----------------ccccccc--CHHHHHHHHHcC
Q 004972 107 GLALGGGLELAMGCHA--RIAAPKTQLGLPELTLGVIPG--T-----------------QRLPRLV--GLSKAIEMMLLS 163 (721)
Q Consensus 107 G~a~GgG~~lalacD~--ria~~~a~~~~pe~~~Gl~P~--~-----------------~~l~r~~--G~~~a~~l~ltg 163 (721)
|.|.++|..++++||. |++.+++.+++....-|. -| . ..+.+.. ......+++..|
T Consensus 94 g~AaS~g~~Ia~agd~~~~~a~p~a~igih~p~~~~-~G~~~d~~~~~~~l~~~~~~~~~~~a~~~g~~~~~i~~~~~~~ 172 (208)
T 2cby_A 94 GMAASMGEFLLAAGTKGKRYALPHARILMHQPLGGV-TGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRD 172 (208)
T ss_dssp EEEETHHHHHHHTSCTTCEEECTTCEEECCCC-----------CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHTT
T ss_pred cEeHHHHHHHHhCCCcCCEEEcCCcEEEEecccccc-cCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHhCC
Confidence 9999999999999998 999999999998765332 12 0 1122222 334466788899
Q ss_pred CCcCHHHHHHcCCccEEcC-CchHHHHH
Q 004972 164 KSITSEEGWKLGLIDAVVT-SEELLKVS 190 (721)
Q Consensus 164 ~~~~a~eA~~~Glv~~vv~-~~~l~~~a 190 (721)
+.++|+||+++||||++.+ .+++++..
T Consensus 173 ~~~ta~eA~e~GLvD~i~~~~~~ll~~~ 200 (208)
T 2cby_A 173 RWFTAAEALEYGFVDHIITRAHVNGEAQ 200 (208)
T ss_dssp CEEEHHHHHHHTSCSEECSCC-------
T ss_pred cEEcHHHHHHcCCCcEecCchHHHHHHH
Confidence 9999999999999999984 45555443
No 187
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=98.82 E-value=7.1e-09 Score=108.61 Aligned_cols=120 Identities=13% Similarity=0.235 Sum_probs=81.9
Q ss_pred eEEEEcCCCCcHHHHHHHHHCCC-ceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCccccCCC
Q 004972 307 KVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 385 (721)
Q Consensus 307 kI~VIG~G~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~a 385 (721)
||+|||+|.||.++|..++..|+ +|+++|+++++++.....+.+.... . + ...+++.+++++++++|
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~-~--~---------~~~~i~~t~d~~a~~~a 68 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAE-L--G---------VDIRISGSNSYEDMRGS 68 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHH-H--T---------CCCCEEEESCGGGGTTC
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhh-c--C---------CCeEEEECCCHHHhCCC
Confidence 79999999999999999998888 7999999998876432222211100 0 0 01246776788899999
Q ss_pred CEEEEc--------------ccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhccc----C-CCCcEEEe
Q 004972 386 DMVIEA--------------VIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKT----S-SQDRIIGA 441 (721)
Q Consensus 386 DlVIea--------------vpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~~l~~~~----~-~~~r~ig~ 441 (721)
|+||++ +..+..+++++.+++.+++ ++++++..|. |+..+...+ . .+.|++|+
T Consensus 69 D~Vi~~ag~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~tN--Pv~~~t~~~~k~~~~p~~rviG~ 140 (308)
T 2d4a_B 69 DIVLVTAGIGRKPGMTREQLLEANANTMADLAEKIKAYA-KDAIVVITTN--PVDAMTYVMYKKTGFPRERVIGF 140 (308)
T ss_dssp SEEEECCSCCCCSSCCTHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECCS--SHHHHHHHHHHHHCCCGGGEEEC
T ss_pred CEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEeCC--chHHHHHHHHHhcCCChhhEEEe
Confidence 999999 4456677889999999997 5554443332 444433332 1 24567664
No 188
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=98.81 E-value=1.5e-08 Score=107.06 Aligned_cols=171 Identities=15% Similarity=0.116 Sum_probs=108.6
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhh-hh---cCCCCHHHHHHhhcCceeccCccc
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGL-VT---RGKLTQDKANNALKMLKGVLDYSE 381 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~-~~---~g~~~~~~~~~~~~~i~~~~~~~~ 381 (721)
+||+|||+|.||+.+|..|+++|++|++|++++. +...+. .+ +. .+.. ....+..+++.+.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~~--~~i~~~------Gl~~~~~~~g~~-------~~~~~~~~~~~~~ 67 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSDY--ETVKAK------GIRIRSATLGDY-------TFRPAAVVRSAAE 67 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTTH--HHHHHH------CEEEEETTTCCE-------EECCSCEESCGGG
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCChH--HHHHhC------CcEEeecCCCcE-------EEeeeeeECCHHH
Confidence 5899999999999999999999999999999862 332110 00 00 1100 0012344566655
Q ss_pred c-CCCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCH-HHHhcccCCCCcEEEe-cCC-----CCCCC---C
Q 004972 382 F-KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL-NIVGEKTSSQDRIIGA-HFF-----SPAHV---M 450 (721)
Q Consensus 382 l-~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i-~~l~~~~~~~~r~ig~-h~~-----~p~~~---~ 450 (721)
+ +++|+||.||| .....++++++.++++++++|++...++.. ..+.+.++.. ++++. -++ .|-.+ .
T Consensus 68 ~~~~~DlVilavK--~~~~~~~l~~l~~~l~~~t~Iv~~~nGi~~~~~l~~~~~~~-~vl~g~~~~~a~~~~pg~v~~~~ 144 (320)
T 3i83_A 68 LETKPDCTLLCIK--VVEGADRVGLLRDAVAPDTGIVLISNGIDIEPEVAAAFPDN-EVISGLAFIGVTRTAPGEIWHQA 144 (320)
T ss_dssp CSSCCSEEEECCC--CCTTCCHHHHHTTSCCTTCEEEEECSSSSCSHHHHHHSTTS-CEEEEEEEEEEEEEETTEEEEEE
T ss_pred cCCCCCEEEEecC--CCChHHHHHHHHhhcCCCCEEEEeCCCCChHHHHHHHCCCC-cEEEEEEEeceEEcCCCEEEECC
Confidence 5 48999999998 444457889999999999999888888864 5566655433 44432 221 22111 1
Q ss_pred CeeEEe-cCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCchhhhhh
Q 004972 451 PLLEIV-RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRA 494 (721)
Q Consensus 451 ~lvEiv-~~~~t~~e~~~~~~~l~~~lG~~~v~v~d~~gfi~nRl 494 (721)
+..-.+ .-...+.+..+.+.+++...|..+.+..|.-+.....+
T Consensus 145 ~~~~~ig~~~~~~~~~~~~l~~~l~~~~~~~~~~~di~~~~w~Kl 189 (320)
T 3i83_A 145 YGRLMLGNYPGGVSERVKTLAAAFEEAGIDGIATENITTARWQKC 189 (320)
T ss_dssp EEEEEEEESSSCCCHHHHHHHHHHHHTTSCEEECSCHHHHHHHHH
T ss_pred CCEEEEecCCCCccHHHHHHHHHHHhCCCCceECHHHHHHHHHHH
Confidence 111112 11233456788899999998888777777555444443
No 189
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=98.81 E-value=9.5e-09 Score=108.03 Aligned_cols=106 Identities=20% Similarity=0.234 Sum_probs=75.3
Q ss_pred CCceeEEEEcCCCCcHHHHHHHHHCCC-ceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCccc
Q 004972 303 RGVRKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE 381 (721)
Q Consensus 303 ~~~~kI~VIG~G~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 381 (721)
|+++||+|||+|.||.++|..++..|+ +|+++|+++++++.....+.+.... .. ...++..++++++
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~-~~-----------~~~~v~~t~d~~a 72 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPV-DG-----------FDAKFTGANDYAA 72 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHH-HT-----------CCCCEEEESSGGG
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhh-cC-----------CCCEEEEeCCHHH
Confidence 346799999999999999999999999 9999999998876433222221110 00 0134666788899
Q ss_pred cCCCCEEEEcccC--------------ChHHHHHHHHHHHhhCCCCeEEEecCC
Q 004972 382 FKDVDMVIEAVIE--------------SVPLKQKIFSELEKACPPHCILATNTS 421 (721)
Q Consensus 382 l~~aDlVIeavpe--------------~~~~k~~v~~~l~~~~~~~~ii~s~ts 421 (721)
+++||+||.+..- +..+.+++.+++.+++ ++++++..|.
T Consensus 73 ~~~aDiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~iivvtN 125 (324)
T 3gvi_A 73 IEGADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYA-PEAFVICITN 125 (324)
T ss_dssp GTTCSEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHC-TTCEEEECCS
T ss_pred HCCCCEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHC-CCeEEEecCC
Confidence 9999999999731 3456667777888887 5666554443
No 190
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=98.80 E-value=6.7e-09 Score=108.88 Aligned_cols=104 Identities=18% Similarity=0.252 Sum_probs=78.0
Q ss_pred CceeEEEEcCCCCcHHHHHHHHHCCC--ceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCccc
Q 004972 304 GVRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE 381 (721)
Q Consensus 304 ~~~kI~VIG~G~mG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 381 (721)
+.+||+|||+|.||.++|..++..|+ +|+++|++++.++.....+.+... . . ...++..++++++
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~--~--~---------~~~~i~~t~d~~~ 86 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSL--F--L---------HTAKIVSGKDYSV 86 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGG--G--S---------CCSEEEEESSSCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhh--c--c---------cCCeEEEcCCHHH
Confidence 56899999999999999999999997 999999999887764433333211 0 0 1135677888988
Q ss_pred cCCCCEEEEcc--------------cCChHHHHHHHHHHHhhCCCCeEEEecCC
Q 004972 382 FKDVDMVIEAV--------------IESVPLKQKIFSELEKACPPHCILATNTS 421 (721)
Q Consensus 382 l~~aDlVIeav--------------pe~~~~k~~v~~~l~~~~~~~~ii~s~ts 421 (721)
+++||+||++. .++..+++++.+++.+++ ++++++..|.
T Consensus 87 ~~daDiVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~-P~a~ilvvtN 139 (330)
T 3ldh_A 87 SAGSKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHS-PDCLKELHPE 139 (330)
T ss_dssp CSSCSEEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHC-TTCEEEECSS
T ss_pred hCCCCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhC-CCceEEeCCC
Confidence 99999999874 345678888889999995 5565554443
No 191
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=98.79 E-value=9.3e-09 Score=108.11 Aligned_cols=127 Identities=18% Similarity=0.375 Sum_probs=82.5
Q ss_pred CCceeEEEEcCCCCcHHHHHHHHHCCC-ceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCccc
Q 004972 303 RGVRKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE 381 (721)
Q Consensus 303 ~~~~kI~VIG~G~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 381 (721)
|+++||+|||+|.||.++|..++..|+ +|+++|+++++++.....+.+... .. + ...++..++++++
T Consensus 3 m~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~--~~-~---------~~~~v~~t~d~~a 70 (321)
T 3p7m_A 3 MARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCP--IE-G---------VDFKVRGTNDYKD 70 (321)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHH--HH-T---------CCCCEEEESCGGG
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhh--hc-C---------CCcEEEEcCCHHH
Confidence 346799999999999999999999998 999999999886543222221100 00 0 0124666678899
Q ss_pred cCCCCEEEEcccC--------------ChHHHHHHHHHHHhhCCCCeEEEecCCCCC--HHHHhcccC-CCCcEEEec
Q 004972 382 FKDVDMVIEAVIE--------------SVPLKQKIFSELEKACPPHCILATNTSTID--LNIVGEKTS-SQDRIIGAH 442 (721)
Q Consensus 382 l~~aDlVIeavpe--------------~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~--i~~l~~~~~-~~~r~ig~h 442 (721)
+++||+||.+..- +..+.+++.+++.+++ |+++++..|.... ...+..... .+.|++|+.
T Consensus 71 ~~~aDvVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~vivvtNPvd~~t~~~~k~sg~p~~rviG~~ 147 (321)
T 3p7m_A 71 LENSDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNC-PNAFVICITNPLDIMVNMLQKFSGVPDNKIVGMA 147 (321)
T ss_dssp GTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECCSSHHHHHHHHHHHHCCCGGGEEEEC
T ss_pred HCCCCEEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHC-CCcEEEEecCchHHHHHHHHHhcCCCHHHEEeec
Confidence 9999999999631 3456777778888887 5565554333222 122222223 236777744
No 192
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=98.79 E-value=1.7e-08 Score=106.10 Aligned_cols=122 Identities=18% Similarity=0.259 Sum_probs=80.6
Q ss_pred ceeEEEEcCCCCcHHHHHHHHHCC--CceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCcee-ccCccc
Q 004972 305 VRKVAVIGGGLMGSGIATAHILNN--IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG-VLDYSE 381 (721)
Q Consensus 305 ~~kI~VIG~G~mG~~iA~~la~~G--~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~-~~~~~~ 381 (721)
|+||+|||+|.||.++|..|+.+| ++|++||+++++++.....+.+... ..+ ..+.. ++++++
T Consensus 1 m~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~---~~~-----------~~~~~~~~d~~~ 66 (309)
T 1hyh_A 1 ARKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMA---NLE-----------AHGNIVINDWAA 66 (309)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGG---GSS-----------SCCEEEESCGGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhh---hcC-----------CCeEEEeCCHHH
Confidence 368999999999999999999999 7999999999887765432221110 000 12232 456688
Q ss_pred cCCCCEEEEcccCCh------------------HHHHHHHHHHHhhCCCCeEEEecCCCCCH-HHHhccc--CCCCcEEE
Q 004972 382 FKDVDMVIEAVIESV------------------PLKQKIFSELEKACPPHCILATNTSTIDL-NIVGEKT--SSQDRIIG 440 (721)
Q Consensus 382 l~~aDlVIeavpe~~------------------~~k~~v~~~l~~~~~~~~ii~s~ts~~~i-~~l~~~~--~~~~r~ig 440 (721)
+++||+||+|++... .+++++++++.++++ +++++..|.+..+ +.+.... -.+.|++|
T Consensus 67 ~~~aDvViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~~-~~~ii~~tNp~~~~~~~~~~~~~~~~~rvig 145 (309)
T 1hyh_A 67 LADADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGF-HGVLVVISNPVDVITALFQHVTGFPAHKVIG 145 (309)
T ss_dssp GTTCSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTC-CSEEEECSSSHHHHHHHHHHHHCCCGGGEEE
T ss_pred hCCCCEEEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC-CcEEEEEcCcHHHHHHHHHHhcCCCHHHEee
Confidence 899999999998533 246788888888775 5555443333222 2233221 24567777
Q ss_pred e
Q 004972 441 A 441 (721)
Q Consensus 441 ~ 441 (721)
+
T Consensus 146 ~ 146 (309)
T 1hyh_A 146 T 146 (309)
T ss_dssp C
T ss_pred c
Confidence 6
No 193
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=98.75 E-value=3.7e-08 Score=103.44 Aligned_cols=102 Identities=18% Similarity=0.143 Sum_probs=70.9
Q ss_pred eeEEEEcCCCCcHHHHHHHHHC--CCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCccccC
Q 004972 306 RKVAVIGGGLMGSGIATAHILN--NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 383 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~--G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~ 383 (721)
+||+|||+|.||.++|..|+.. |++|++||+++++++.....+.+... . .....++..+++++.++
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~---~---------~~~~~~i~~t~d~~~l~ 68 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGP---V---------GLFDTKVTGSNDYADTA 68 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHH---H---------HTCCCEEEEESCGGGGT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhh---c---------ccCCcEEEECCCHHHHC
Confidence 4899999999999999999985 78999999999887743211111000 0 00113467778887799
Q ss_pred CCCEEEEcccCC--------------hHHHHHHHHHHHhhCCCCeEEEecC
Q 004972 384 DVDMVIEAVIES--------------VPLKQKIFSELEKACPPHCILATNT 420 (721)
Q Consensus 384 ~aDlVIeavpe~--------------~~~k~~v~~~l~~~~~~~~ii~s~t 420 (721)
+||+||+|+|.. ..+.+++.+.+.+++ ++++++..|
T Consensus 69 ~aDvViiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-~~~~viv~t 118 (310)
T 1guz_A 69 NSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHS-KNPIIIVVS 118 (310)
T ss_dssp TCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-SSCEEEECC
T ss_pred CCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEEEc
Confidence 999999999632 245567777888886 455444333
No 194
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=98.75 E-value=5.7e-09 Score=111.27 Aligned_cols=117 Identities=14% Similarity=-0.000 Sum_probs=82.6
Q ss_pred eeEEEEcCCCCcHHHHHHHH-HCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cccC
Q 004972 306 RKVAVIGGGLMGSGIATAHI-LNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 383 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la-~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~ 383 (721)
++|+|||+|.||.++|..+. ..|++|++||++++..+...+ . .+...+++ +.++
T Consensus 164 ~~vgIIG~G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~~~-----------~-------------g~~~~~~l~ell~ 219 (348)
T 2w2k_A 164 HVLGAVGLGAIQKEIARKAVHGLGMKLVYYDVAPADAETEKA-----------L-------------GAERVDSLEELAR 219 (348)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHH-----------H-------------TCEECSSHHHHHH
T ss_pred CEEEEEEECHHHHHHHHHHHHhcCCEEEEECCCCcchhhHhh-----------c-------------CcEEeCCHHHHhc
Confidence 58999999999999999999 899999999998765443210 0 12233344 4578
Q ss_pred CCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCC--CCHHHHhcccCCC-CcEEEecCCCC
Q 004972 384 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST--IDLNIVGEKTSSQ-DRIIGAHFFSP 446 (721)
Q Consensus 384 ~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~--~~i~~l~~~~~~~-~r~ig~h~~~p 446 (721)
+||+|++++|.+.+.+.-+.+++.+.++++++|++.+++ .....+.+.+... -...|+++|.+
T Consensus 220 ~aDvVil~vp~~~~t~~li~~~~l~~mk~gailin~srg~~vd~~aL~~aL~~~~i~gaglDv~~~ 285 (348)
T 2w2k_A 220 RSDCVSVSVPYMKLTHHLIDEAFFAAMKPGSRIVNTARGPVISQDALIAALKSGKLLSAGLDVHEF 285 (348)
T ss_dssp HCSEEEECCCCSGGGTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTSEEEEEESSCTT
T ss_pred cCCEEEEeCCCChHHHHHhhHHHHhcCCCCCEEEECCCCchhCHHHHHHHHHhCCceEEEeccCCC
Confidence 999999999987765544445666778999988754444 3345666666432 22367898874
No 195
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=98.74 E-value=4.4e-09 Score=111.47 Aligned_cols=117 Identities=12% Similarity=0.050 Sum_probs=81.6
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cccCC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 384 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 384 (721)
++|+|||+|.||..+|..++..|++|++||++++..+... +. .+... ++ +.+++
T Consensus 156 ~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~-----------~~-------------g~~~~-~l~e~l~~ 210 (330)
T 2gcg_A 156 STVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEAA-----------EF-------------QAEFV-STPELAAQ 210 (330)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGTCCEEEEESSSCCHHHHH-----------TT-------------TCEEC-CHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcchhHHH-----------hc-------------CceeC-CHHHHHhh
Confidence 5899999999999999999999999999999876443321 11 12223 44 45789
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCC--CCHHHHhcccC-CCCcEEEecCCCCC
Q 004972 385 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST--IDLNIVGEKTS-SQDRIIGAHFFSPA 447 (721)
Q Consensus 385 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~--~~i~~l~~~~~-~~~r~ig~h~~~p~ 447 (721)
||+||+++|.+.+.+.-+-+++.+.++++++|++.+++ .....+.+.+. ..-...++++|.|.
T Consensus 211 aDvVi~~vp~~~~t~~~i~~~~~~~mk~gailIn~srg~~v~~~aL~~aL~~~~i~ga~lDv~~~e 276 (330)
T 2gcg_A 211 SDFIVVACSLTPATEGLCNKDFFQKMKETAVFINISRGDVVNQDDLYQALASGKIAAAGLDVTSPE 276 (330)
T ss_dssp CSEEEECCCCCTTTTTCBSHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESCCSSS
T ss_pred CCEEEEeCCCChHHHHhhCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHcCCccEEEeCCCCCC
Confidence 99999999977654433335566778999988754444 33355665553 23345788987654
No 196
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=98.73 E-value=3.9e-08 Score=103.82 Aligned_cols=123 Identities=27% Similarity=0.375 Sum_probs=81.8
Q ss_pred ceeEEEEcCCCCcHHHHHHHHHCCC--ceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCcccc
Q 004972 305 VRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF 382 (721)
Q Consensus 305 ~~kI~VIG~G~mG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l 382 (721)
++||+|||+|.||+.+|..|+.+|+ +|+++|++++.++.....+.+.+ .-.+ ..++..+++++++
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~---~~~~----------~~~v~~~~~~~~~ 73 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGS---SFYP----------TVSIDGSDDPEIC 73 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTG---GGST----------TCEEEEESCGGGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhh---hhcC----------CeEEEeCCCHHHh
Confidence 4699999999999999999999999 99999999877652111111111 0000 1234555567788
Q ss_pred CCCCEEEEcccC--------------ChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHH-Hhcc-cC-CCCcEEEe
Q 004972 383 KDVDMVIEAVIE--------------SVPLKQKIFSELEKACPPHCILATNTSTIDLNI-VGEK-TS-SQDRIIGA 441 (721)
Q Consensus 383 ~~aDlVIeavpe--------------~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~~-l~~~-~~-~~~r~ig~ 441 (721)
++||+||+++.. +..+++++++++.++ .++++|++.+.++.+.+ +... .. .+.+++|.
T Consensus 74 ~~aD~Vii~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~-~~~~~vi~~~Np~~~~~~~~~~~~~~~~~~vig~ 148 (319)
T 1lld_A 74 RDADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKV-APNAIYMLITNPVDIATHVAQKLTGLPENQIFGS 148 (319)
T ss_dssp TTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTSEEEECCSSHHHHHHHHHHHHTCCTTSEEEC
T ss_pred CCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEEecCchHHHHHHHHHhcCCCHHHEeec
Confidence 999999999931 235667888888887 57777777666655433 2221 12 34567654
No 197
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=98.71 E-value=5.4e-09 Score=112.02 Aligned_cols=110 Identities=22% Similarity=0.166 Sum_probs=81.1
Q ss_pred ceeEEEEcCCCCcHHHHHHHHHCCC--------ceEEEeCCHHHHHH-HHHHHHHH--HHhhhhcCCCCHHHHHHhhcCc
Q 004972 305 VRKVAVIGGGLMGSGIATAHILNNI--------YVVLKEVNSEYLLK-GIKTIEAN--VRGLVTRGKLTQDKANNALKML 373 (721)
Q Consensus 305 ~~kI~VIG~G~mG~~iA~~la~~G~--------~V~l~d~~~~~~~~-~~~~~~~~--~~~~~~~g~~~~~~~~~~~~~i 373 (721)
..||+|||+|.||+++|..|+++|+ +|++|.++++.... ..+.++.. -..++..-.+ ..++
T Consensus 34 p~KI~ViGaGsWGTALA~~la~ng~~~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~L--------p~~i 105 (391)
T 4fgw_A 34 PFKVTVIGSGNWGTTIAKVVAENCKGYPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITL--------PDNL 105 (391)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHCTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCCC--------CSSE
T ss_pred CCeEEEECcCHHHHHHHHHHHHcCCCccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCcC--------CCCc
Confidence 3589999999999999999999875 49999998763111 11111100 0001111112 2568
Q ss_pred eeccCc-cccCCCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCC
Q 004972 374 KGVLDY-SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 424 (721)
Q Consensus 374 ~~~~~~-~~l~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~ 424 (721)
.+++|+ +++++||+||.+|| .+..+.+++++.+++++++++++.+.++.
T Consensus 106 ~~t~dl~~al~~ad~ii~avP--s~~~r~~l~~l~~~~~~~~~iv~~~KGie 155 (391)
T 4fgw_A 106 VANPDLIDSVKDVDIIVFNIP--HQFLPRICSQLKGHVDSHVRAISCLKGFE 155 (391)
T ss_dssp EEESCHHHHHTTCSEEEECSC--GGGHHHHHHHHTTTSCTTCEEEECCCSCE
T ss_pred EEeCCHHHHHhcCCEEEEECC--hhhhHHHHHHhccccCCCceeEEeccccc
Confidence 889998 67899999999999 99999999999999999999998887764
No 198
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=98.71 E-value=1.3e-08 Score=106.49 Aligned_cols=93 Identities=18% Similarity=0.199 Sum_probs=67.7
Q ss_pred cChHHHHHHHHHHHHHHHHHHhhcCcCCChhHHHHHHHHccCCCCCCCcHhHHHHHhCHHHHH------HHHHHHHHhhC
Q 004972 615 VTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVY------TSLKKWSQLYG 688 (721)
Q Consensus 615 ~~~~~i~~r~~~~~~~ea~~~l~~gv~~~~~~iD~~~~~g~g~~~~~~Gp~~~~d~~G~~~~~------~~~~~~~~~~~ 688 (721)
-++++|.||++.+++|||+++++||++ |++|||.++..|+|+|...-|||+++|+.|.+... ..++.+...++
T Consensus 189 d~pGFi~NRl~~~~~~EA~~lv~eGva-s~edID~~~~~g~g~~~a~mGPf~~~Dl~G~~~~~~~~~~~~~~~~~~~~~~ 267 (319)
T 3ado_A 189 EIDGFVLNRLQYAIISEAWRLVEEGIV-SPSDLDLVMSDGLGMRYAFIGPLETMHLNAEGMLSYCDRYSEGMKRVLKSFG 267 (319)
T ss_dssp CCTTTTHHHHHHHHHHHHHHHHHTTSS-CHHHHHHHHHTTHHHHHTTSCHHHHHHHTTTSHHHHHHHHHHHHHHHHHTCC
T ss_pred CCCCEeHHHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHhCCCCCCCCcchhhhhhhcCccHHHHHHHhhHhHHHHHHHcC
Confidence 368999999999999999999999999 99999999999999872223999999999975433 22333444444
Q ss_pred CCCCCCHHHHHHHHcCCCCcCC
Q 004972 689 NFFKPSRFLEERATKGIPLSAP 710 (721)
Q Consensus 689 ~~~~p~~~l~~~~~~g~~f~~~ 710 (721)
....-...+.+ +.++|||.+
T Consensus 268 ~~p~~~~~~~~--k~~~g~~~~ 287 (319)
T 3ado_A 268 SIPEFSGATVE--KVNQAMCKK 287 (319)
T ss_dssp CCCCCCHHHHH--HHHHHHHHH
T ss_pred cccccchHHHH--HHHHHHhhc
Confidence 32111222332 446778876
No 199
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=98.68 E-value=6.7e-08 Score=106.42 Aligned_cols=123 Identities=16% Similarity=0.175 Sum_probs=80.8
Q ss_pred ceeEEEEcCCCC--cHHHHHHHHHC----CCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccC
Q 004972 305 VRKVAVIGGGLM--GSGIATAHILN----NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLD 378 (721)
Q Consensus 305 ~~kI~VIG~G~m--G~~iA~~la~~----G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~ 378 (721)
.+||+|||+|.| |.++|..++.. |++|++||+++++++.+.......+ ..... ..+++.++|
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~~e~l~~~~~~~~~~l----~~~~~--------~~~I~~ttD 70 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYV----EEVGA--------DLKFEKTMN 70 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHH----HHTTC--------CCEEEEESC
T ss_pred CCEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCCHHHHHHHHHHHHHHh----ccCCC--------CcEEEEECC
Confidence 359999999997 46567778754 8899999999999887654332222 11111 246888888
Q ss_pred c-cccCCCCEEEEcccC-----------------------C-----------------hHHHHHHHHHHHhhCCCCeEEE
Q 004972 379 Y-SEFKDVDMVIEAVIE-----------------------S-----------------VPLKQKIFSELEKACPPHCILA 417 (721)
Q Consensus 379 ~-~~l~~aDlVIeavpe-----------------------~-----------------~~~k~~v~~~l~~~~~~~~ii~ 417 (721)
+ +++++||+||++++- + ..+..++.+++.+++ |+++++
T Consensus 71 ~~eal~dAD~VIiaagv~~~~~~~~dE~ip~K~g~~~~l~dt~g~g~~~~G~~~~~rni~i~~~i~~~i~~~~-P~A~ii 149 (480)
T 1obb_A 71 LDDVIIDADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLS-PKAWYL 149 (480)
T ss_dssp HHHHHTTCSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHC-TTCEEE
T ss_pred HHHHhCCCCEEEECCCcccccccccccccccccccccchhhhcCCccchhhhHHhhhhHHHHHHHHHHHHHHC-CCeEEE
Confidence 8 789999999999952 1 146677778888887 556665
Q ss_pred ecCCCCCH-HHHhcccCCCCcEEEe
Q 004972 418 TNTSTIDL-NIVGEKTSSQDRIIGA 441 (721)
Q Consensus 418 s~ts~~~i-~~l~~~~~~~~r~ig~ 441 (721)
..|....+ ++..... .+.|++|+
T Consensus 150 ~~TNPvdi~t~~~~k~-p~~rviG~ 173 (480)
T 1obb_A 150 QAANPIFEGTTLVTRT-VPIKAVGF 173 (480)
T ss_dssp ECSSCHHHHHHHHHHH-SCSEEEEE
T ss_pred EeCCcHHHHHHHHHHC-CCCcEEec
Confidence 44444332 2322222 34466663
No 200
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=98.68 E-value=5.4e-08 Score=100.93 Aligned_cols=103 Identities=17% Similarity=0.273 Sum_probs=71.4
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCC--ceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCccccC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 383 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~ 383 (721)
+||+|||+|.||.++|..|+..|+ +|++||++++.++.....+.+....+ . ...++..++|+++++
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~---~---------~~~~i~~t~d~~a~~ 68 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGI---D---------KYPKIVGGADYSLLK 68 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTT---T---------CCCEEEEESCGGGGT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhc---C---------CCCEEEEeCCHHHhC
Confidence 489999999999999999999998 99999999998763222222211111 0 012466677788999
Q ss_pred CCCEEEEcccC--------------ChHHHHHHHHHHHhhCCCCeEEEecCC
Q 004972 384 DVDMVIEAVIE--------------SVPLKQKIFSELEKACPPHCILATNTS 421 (721)
Q Consensus 384 ~aDlVIeavpe--------------~~~~k~~v~~~l~~~~~~~~ii~s~ts 421 (721)
+||+||.+..- +..+.+++.+++.+++ |+++++..|.
T Consensus 69 ~aDiVViaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~iivvsN 119 (294)
T 1oju_A 69 GSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENA-PESKILVVTN 119 (294)
T ss_dssp TCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTS-TTCEEEECSS
T ss_pred CCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEeCC
Confidence 99999998742 2245556666777775 5666654443
No 201
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=98.68 E-value=1.7e-08 Score=106.21 Aligned_cols=122 Identities=21% Similarity=0.302 Sum_probs=78.2
Q ss_pred CceeEEEEcCCCCcHHHHHHHHHCCC--ceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCccc
Q 004972 304 GVRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE 381 (721)
Q Consensus 304 ~~~kI~VIG~G~mG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 381 (721)
+++||+|||+|.||.++|..++..|. +|+++|++++.++.....+.+. ....+. ..++. ++++++
T Consensus 5 ~~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~---~~~~~~---------~~~i~-~~~~~a 71 (316)
T 1ldn_A 5 GGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHG---KVFAPK---------PVDIW-HGDYDD 71 (316)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHH---TTSSSS---------CCEEE-ECCGGG
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHH---hhhcCC---------CeEEE-cCcHHH
Confidence 45799999999999999999998875 8999999988555322222111 000000 01233 345688
Q ss_pred cCCCCEEEEccc--------------CChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhccc----C-CCCcEEEe
Q 004972 382 FKDVDMVIEAVI--------------ESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKT----S-SQDRIIGA 441 (721)
Q Consensus 382 l~~aDlVIeavp--------------e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~~l~~~~----~-~~~r~ig~ 441 (721)
+++||+||++++ ++..+++++.+++.++++ +++++..| .|+..+...+ . .+.|++|+
T Consensus 72 l~~aDvViia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p-~a~~iv~t--NPv~~~~~~~~~~s~~p~~rviG~ 147 (316)
T 1ldn_A 72 CRDADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGF-QGLFLVAT--NPVDILTYATWKFSGLPHERVIGS 147 (316)
T ss_dssp TTTCSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTC-CSEEEECS--SSHHHHHHHHHHHHTCCGGGEEEC
T ss_pred hCCCCEEEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHHCC-CCEEEEeC--CchHHHHHHHHHHhCCCHHHEEec
Confidence 999999999953 344788899999999974 55443333 2444333332 1 24566664
No 202
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=98.67 E-value=5.2e-09 Score=111.06 Aligned_cols=116 Identities=16% Similarity=0.057 Sum_probs=81.0
Q ss_pred ceeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cccC
Q 004972 305 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 383 (721)
Q Consensus 305 ~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~ 383 (721)
-++|+|||+|.||.++|..++..|++|++||++++. +.+. ..| +.. +++ +.++
T Consensus 150 g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~-~~~~-----------~~g-------------~~~-~~l~~~l~ 203 (334)
T 2dbq_A 150 GKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRKE-EVER-----------ELN-------------AEF-KPLEDLLR 203 (334)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH-HHHH-----------HHC-------------CEE-CCHHHHHH
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCEEEEECCCcch-hhHh-----------hcC-------------ccc-CCHHHHHh
Confidence 368999999999999999999999999999999876 3221 001 222 244 4578
Q ss_pred CCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHH--HHhcccC-CCCcEEEecCCCC
Q 004972 384 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFFSP 446 (721)
Q Consensus 384 ~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~--~l~~~~~-~~~r~ig~h~~~p 446 (721)
+||+|++++|.+.+.+.-+.+++.+.++++++|++.+.+..+. .+.+.+. ..-...|+|+|+|
T Consensus 204 ~aDvVil~vp~~~~t~~~i~~~~~~~mk~~ailIn~srg~~v~~~aL~~aL~~~~i~ga~lDv~~~ 269 (334)
T 2dbq_A 204 ESDFVVLAVPLTRETYHLINEERLKLMKKTAILINIARGKVVDTNALVKALKEGWIAGAGLDVFEE 269 (334)
T ss_dssp HCSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESCCSS
T ss_pred hCCEEEECCCCChHHHHhhCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhCCeeEEEecCCCC
Confidence 9999999999877554433356667789999887555443333 4555543 2334477998873
No 203
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=98.66 E-value=2.8e-08 Score=108.59 Aligned_cols=107 Identities=16% Similarity=0.113 Sum_probs=76.4
Q ss_pred ceeEEEEcCCCCcHHHHHHHHH-CCCceEEEe---CCHHHHHHHHHHHHHHHHhhhhcC------CCCHHHHHHhhcCce
Q 004972 305 VRKVAVIGGGLMGSGIATAHIL-NNIYVVLKE---VNSEYLLKGIKTIEANVRGLVTRG------KLTQDKANNALKMLK 374 (721)
Q Consensus 305 ~~kI~VIG~G~mG~~iA~~la~-~G~~V~l~d---~~~~~~~~~~~~~~~~~~~~~~~g------~~~~~~~~~~~~~i~ 374 (721)
++||+|||+|.||+.+|..|++ +|++|++|| ++++.++.+.+ +.+ ... .+......++.
T Consensus 2 ~mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~~~~r~~~~~~~~~~----------~~g~~~~~~~~~-~~~~~~~~~~~ 70 (404)
T 3c7a_A 2 TVKVCVCGGGNGAHTLSGLAASRDGVEVRVLTLFADEAERWTKALG----------ADELTVIVNEKD-GTQTEVKSRPK 70 (404)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSTTEEEEEECCSTTHHHHHHHHHT----------TSCEEEEEECSS-SCEEEEEECCS
T ss_pred CceEEEECCCHHHHHHHHHHHhCCCCEEEEEeCCCCcHHHHHHHHh----------hccceeeeecCC-Cccceeeccce
Confidence 3689999999999999999988 599999999 87777665321 111 000 00000012333
Q ss_pred -eccCc-cccCCCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCC
Q 004972 375 -GVLDY-SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 424 (721)
Q Consensus 375 -~~~~~-~~l~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~ 424 (721)
.++++ +.+++||+||+||| .....++++++.++++++++|++++++..
T Consensus 71 ~~~~~~~~a~~~aD~Vilav~--~~~~~~v~~~l~~~l~~~~ivv~~~~~~G 120 (404)
T 3c7a_A 71 VITKDPEIAISGADVVILTVP--AFAHEGYFQAMAPYVQDSALIVGLPSQAG 120 (404)
T ss_dssp EEESCHHHHHTTCSEEEECSC--GGGHHHHHHHHTTTCCTTCEEEETTCCTT
T ss_pred EEeCCHHHHhCCCCEEEEeCc--hHHHHHHHHHHHhhCCCCcEEEEcCCCcc
Confidence 55666 45789999999999 55578999999999999999998665554
No 204
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=98.66 E-value=5e-09 Score=110.76 Aligned_cols=111 Identities=14% Similarity=0.051 Sum_probs=79.5
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cccCC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 384 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 384 (721)
++|+|||+|.||.++|..+...|++|++||++++..+ + ....+++ +.+++
T Consensus 165 ~~vgIIG~G~iG~~vA~~l~~~G~~V~~~dr~~~~~~----------------g-------------~~~~~~l~ell~~ 215 (333)
T 3ba1_A 165 KRVGIIGLGRIGLAVAERAEAFDCPISYFSRSKKPNT----------------N-------------YTYYGSVVELASN 215 (333)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSCCTTC----------------C-------------SEEESCHHHHHHT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEECCCchhcc----------------C-------------ceecCCHHHHHhc
Confidence 5799999999999999999999999999999875311 1 1223445 45789
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCH--HHHhcccC-CCCcEEEecCCC
Q 004972 385 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--NIVGEKTS-SQDRIIGAHFFS 445 (721)
Q Consensus 385 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i--~~l~~~~~-~~~r~ig~h~~~ 445 (721)
||+|++++|.+.+.+.-+-++..+.++++++|++.+++..+ ..+.+.+. ...+..++++|.
T Consensus 216 aDvVil~vP~~~~t~~li~~~~l~~mk~gailIn~srG~~vd~~aL~~aL~~g~i~ga~lDv~~ 279 (333)
T 3ba1_A 216 SDILVVACPLTPETTHIINREVIDALGPKGVLINIGRGPHVDEPELVSALVEGRLGGAGLDVFE 279 (333)
T ss_dssp CSEEEECSCCCGGGTTCBCHHHHHHHCTTCEEEECSCGGGBCHHHHHHHHHHTSSCEEEESCCT
T ss_pred CCEEEEecCCChHHHHHhhHHHHhcCCCCCEEEECCCCchhCHHHHHHHHHcCCCeEEEEecCC
Confidence 99999999976654433324455667889988765554333 45666554 334677888886
No 205
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=98.65 E-value=6.5e-08 Score=103.73 Aligned_cols=105 Identities=15% Similarity=0.096 Sum_probs=73.9
Q ss_pred ceeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCc-eeccCc-ccc
Q 004972 305 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKML-KGVLDY-SEF 382 (721)
Q Consensus 305 ~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i-~~~~~~-~~l 382 (721)
++||+|||+|.||+.+|..|+++|++|++||++++.++...+.. ...+...... ...++ ..++++ +.+
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~~------~~~~~~~~~~~~~~~~ 73 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRG----AIIAEGPGLA------GTAHPDLLTSDIGLAV 73 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHT----SEEEESSSCC------EEECCSEEESCHHHHH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcC----CeEEeccccc------cccccceecCCHHHHH
Confidence 46899999999999999999999999999999998877653210 0000000000 00122 245555 447
Q ss_pred CCCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCC
Q 004972 383 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 421 (721)
Q Consensus 383 ~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts 421 (721)
+++|+||+|+|.. ...++++++.+.++++++|++..+
T Consensus 74 ~~~D~vi~~v~~~--~~~~~~~~l~~~l~~~~~vv~~~~ 110 (359)
T 1bg6_A 74 KDADVILIVVPAI--HHASIAANIASYISEGQLIILNPG 110 (359)
T ss_dssp TTCSEEEECSCGG--GHHHHHHHHGGGCCTTCEEEESSC
T ss_pred hcCCEEEEeCCch--HHHHHHHHHHHhCCCCCEEEEcCC
Confidence 8999999999944 347888999999999997776533
No 206
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=98.60 E-value=1.5e-08 Score=107.28 Aligned_cols=113 Identities=18% Similarity=0.114 Sum_probs=77.7
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cccCC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 384 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 384 (721)
++|+|||+|.||.++|..+...|++|++||++++. +.+. +.| +... ++ +.+++
T Consensus 147 ~~vgIIG~G~iG~~vA~~l~~~G~~V~~~d~~~~~-~~~~-----------~~g-------------~~~~-~l~e~l~~ 200 (333)
T 2d0i_A 147 KKVGILGMGAIGKAIARRLIPFGVKLYYWSRHRKV-NVEK-----------ELK-------------ARYM-DIDELLEK 200 (333)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCH-HHHH-----------HHT-------------EEEC-CHHHHHHH
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcch-hhhh-----------hcC-------------ceec-CHHHHHhh
Confidence 58999999999999999999999999999999875 2211 001 2222 44 45789
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHH--HHhcccCC-CCcEEEecCCC
Q 004972 385 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTSS-QDRIIGAHFFS 445 (721)
Q Consensus 385 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~--~l~~~~~~-~~r~ig~h~~~ 445 (721)
||+|++++|.+.+.+.-+-+++.+.++++ ++++.+.+..+. .+.+.+.. .-...|+|+|.
T Consensus 201 aDiVil~vp~~~~t~~~i~~~~~~~mk~g-ilin~srg~~vd~~aL~~aL~~~~i~gaglDv~~ 263 (333)
T 2d0i_A 201 SDIVILALPLTRDTYHIINEERVKKLEGK-YLVNIGRGALVDEKAVTEAIKQGKLKGYATDVFE 263 (333)
T ss_dssp CSEEEECCCCCTTTTTSBCHHHHHHTBTC-EEEECSCGGGBCHHHHHHHHHTTCBCEEEESCCS
T ss_pred CCEEEEcCCCChHHHHHhCHHHHhhCCCC-EEEECCCCcccCHHHHHHHHHcCCceEEEecCCC
Confidence 99999999977655444434555678888 776444443332 34455443 33568899987
No 207
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=98.58 E-value=1.8e-07 Score=103.09 Aligned_cols=123 Identities=15% Similarity=0.172 Sum_probs=80.5
Q ss_pred eeEEEEcCCCC-cHHHHHHHHHC-----CCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc
Q 004972 306 RKVAVIGGGLM-GSGIATAHILN-----NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 379 (721)
Q Consensus 306 ~kI~VIG~G~m-G~~iA~~la~~-----G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~ 379 (721)
+||+|||+|.+ |.++|..|+.. +.+|++||+++++++...+.....+.. . + ...++..++|+
T Consensus 29 ~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~~~~~~~~l~~-~--~---------~~~~I~~t~D~ 96 (472)
T 1u8x_X 29 FSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIRE-K--A---------PDIEFAATTDP 96 (472)
T ss_dssp EEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHH-H--C---------TTSEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHHHHHHHHHhcc-C--C---------CCCEEEEECCH
Confidence 59999999998 55688888887 668999999999887754322211111 0 1 11357778887
Q ss_pred -cccCCCCEEEEcccCCh----------------------------------HHHHHHHHHHHhhCCCCeEEEecCCCCC
Q 004972 380 -SEFKDVDMVIEAVIESV----------------------------------PLKQKIFSELEKACPPHCILATNTSTID 424 (721)
Q Consensus 380 -~~l~~aDlVIeavpe~~----------------------------------~~k~~v~~~l~~~~~~~~ii~s~ts~~~ 424 (721)
+++++||+||.++|-.. .+..++.+++.+++ |+++++..|....
T Consensus 97 ~eal~~AD~VViaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~~-P~A~ii~~TNPvd 175 (472)
T 1u8x_X 97 EEAFTDVDFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYS-PDAWMLNYSNPAA 175 (472)
T ss_dssp HHHHSSCSEEEECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECCSCHH
T ss_pred HHHHcCCCEEEEcCCCccccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHHC-CCeEEEEeCCcHH
Confidence 78999999999997411 24667778888887 5566664444433
Q ss_pred H-HHHhcccCCCCcEEEe
Q 004972 425 L-NIVGEKTSSQDRIIGA 441 (721)
Q Consensus 425 i-~~l~~~~~~~~r~ig~ 441 (721)
+ ++.......+.|++|+
T Consensus 176 i~T~~~~k~~p~~rViG~ 193 (472)
T 1u8x_X 176 IVAEATRRLRPNSKILNI 193 (472)
T ss_dssp HHHHHHHHHSTTCCEEEC
T ss_pred HHHHHHHHhCCCCCEEEe
Confidence 3 2333222334477763
No 208
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=98.56 E-value=2.4e-07 Score=97.19 Aligned_cols=115 Identities=18% Similarity=0.090 Sum_probs=77.3
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhh-cCCCCHHHHHHhhcCceeccCccccCC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT-RGKLTQDKANNALKMLKGVLDYSEFKD 384 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~i~~~~~~~~l~~ 384 (721)
+||+|||+|.||+.+|..|+ +|++|++|+++++.++...+. .+ .+. .+. .....+.. +.+.+.+
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~~~~~~l~~~---G~--~~~~~~~-------~~~~~~~~--~~~~~~~ 67 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQEQAAAIQSE---GI--RLYKGGE-------EFRADCSA--DTSINSD 67 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHH---CE--EEEETTE-------EEEECCEE--ESSCCSC
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCHHHHHHHHhC---Cc--eEecCCC-------eecccccc--cccccCC
Confidence 58999999999999999999 999999999999876654321 00 000 000 00001111 1245678
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHH-HhcccCCCCcEEE
Q 004972 385 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI-VGEKTSSQDRIIG 440 (721)
Q Consensus 385 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~~-l~~~~~~~~r~ig 440 (721)
+|+||.||+ .....++++++.+. ++++ |++...++...+ +.+.++ ..++++
T Consensus 68 ~D~vilavK--~~~~~~~l~~l~~~-~~~~-ivs~~nGi~~~e~l~~~~~-~~~vl~ 119 (307)
T 3ego_A 68 FDLLVVTVK--QHQLQSVFSSLERI-GKTN-ILFLQNGMGHIHDLKDWHV-GHSIYV 119 (307)
T ss_dssp CSEEEECCC--GGGHHHHHHHTTSS-CCCE-EEECCSSSHHHHHHHTCCC-SCEEEE
T ss_pred CCEEEEEeC--HHHHHHHHHHhhcC-CCCe-EEEecCCccHHHHHHHhCC-CCcEEE
Confidence 999999998 66777888888765 6777 778888888764 444433 344443
No 209
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=98.53 E-value=1e-07 Score=104.03 Aligned_cols=102 Identities=20% Similarity=0.253 Sum_probs=72.8
Q ss_pred CceeEEEEcCCCC--cHHHHHHHHH----CCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceecc
Q 004972 304 GVRKVAVIGGGLM--GSGIATAHIL----NNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL 377 (721)
Q Consensus 304 ~~~kI~VIG~G~m--G~~iA~~la~----~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~ 377 (721)
+.+||+|||+|.| |.+++..++. .| +|++||+++++++.... +. +. ... ...+++.|+
T Consensus 4 ~~~KIaVIGaGs~g~g~~la~~l~~~~~~~g-eV~L~Di~~e~le~~~~-~~---~~-l~~----------~~~~I~~Tt 67 (450)
T 3fef_A 4 DQIKIAYIGGGSQGWARSLMSDLSIDERMSG-TVALYDLDFEAAQKNEV-IG---NH-SGN----------GRWRYEAVS 67 (450)
T ss_dssp CCEEEEEETTTCSSHHHHHHHHHHHCSSCCE-EEEEECSSHHHHHHHHH-HH---TT-STT----------SCEEEEEES
T ss_pred CCCEEEEECCChhHhHHHHHHHHHhccccCC-eEEEEeCCHHHHHHHHH-HH---HH-Hhc----------cCCeEEEEC
Confidence 3469999999997 5799988886 57 99999999998876532 11 11 111 224688899
Q ss_pred Cc-cccCCCCEEEEcccC------------------------------------ChHHHHHHHHHHHhhCCCCeEEEecC
Q 004972 378 DY-SEFKDVDMVIEAVIE------------------------------------SVPLKQKIFSELEKACPPHCILATNT 420 (721)
Q Consensus 378 ~~-~~l~~aDlVIeavpe------------------------------------~~~~k~~v~~~l~~~~~~~~ii~s~t 420 (721)
|+ +++++||+||++++. +..+..++.+++.+++ |+++++..|
T Consensus 68 D~~eAl~dADfVI~airvG~~~~~~~De~ip~k~G~~~~vget~g~GGi~~alr~~~i~~~i~~~i~~~~-p~a~~i~~t 146 (450)
T 3fef_A 68 TLKKALSAADIVIISILPGSLDDMEVDVHLPERCGIYQSVGDTVGPGGIIRGLRAVPIFAEIARAIRDYA-PESWVINYT 146 (450)
T ss_dssp SHHHHHTTCSEEEECCCSSCHHHHHHHHHGGGGGTCCCSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHC-TTSEEEECC
T ss_pred CHHHHhcCCCEEEeccccCCcccchhhhhhhhccCccccchhhcCCchhhcccccHHHHHHHHHHHHHHC-CCeEEEEec
Confidence 98 678999999999952 1234667777888886 566665444
Q ss_pred CC
Q 004972 421 ST 422 (721)
Q Consensus 421 s~ 422 (721)
..
T Consensus 147 NP 148 (450)
T 3fef_A 147 NP 148 (450)
T ss_dssp SS
T ss_pred Cc
Confidence 43
No 210
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=98.53 E-value=1.8e-07 Score=97.85 Aligned_cols=103 Identities=17% Similarity=0.200 Sum_probs=69.6
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCC--ceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCccccC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 383 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~ 383 (721)
+||+|||+|.||.++|..++..|+ +|+++|+++++++.....+.+..... .. ..++..++++++++
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~-~~-----------~~~v~~~~~~~a~~ 68 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIH-GF-----------DTRVTGTNDYGPTE 68 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHH-TC-----------CCEEEEESSSGGGT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhcccccc-CC-----------CcEEEECCCHHHhC
Confidence 489999999999999999999987 99999999987664322222211100 00 01344456789999
Q ss_pred CCCEEEEcccC--------------ChHHHHHHHHHHHhhCCCCeEEEecCC
Q 004972 384 DVDMVIEAVIE--------------SVPLKQKIFSELEKACPPHCILATNTS 421 (721)
Q Consensus 384 ~aDlVIeavpe--------------~~~~k~~v~~~l~~~~~~~~ii~s~ts 421 (721)
+||+||.+..- +..+.+++.+.+.+++ |+++++..|.
T Consensus 69 ~aDvVii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~vivvtN 119 (314)
T 3nep_X 69 DSDVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGS-PDSTIIVVAN 119 (314)
T ss_dssp TCSEEEECCCC-------CHHHHHHHHHHHHHHHHHHHTTC-TTCEEEECCS
T ss_pred CCCEEEECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHhC-CCcEEEecCC
Confidence 99999998742 2234555566677775 5566654443
No 211
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=98.52 E-value=2.4e-08 Score=104.20 Aligned_cols=164 Identities=12% Similarity=0.033 Sum_probs=106.3
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCcccc-CC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF-KD 384 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l-~~ 384 (721)
+||+|||+|.||+.+|..|+++|++|++|+++++.++. ....|... ..+. .+..+.+ .+
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~~~~~~-----------~~~~g~~~--------~~~~-~~~~~~~~~~ 62 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHAKTITY-----------YTVPHAPA--------QDIV-VKGYEDVTNT 62 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSCEEEEE-----------ESSTTSCC--------EEEE-EEEGGGCCSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEeccCcEEE-----------EecCCeec--------ccee-cCchHhcCCC
Confidence 58999999999999999999999999999999654221 00112110 1121 1223444 88
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhcccCCCCcEEEe------cCCCCCCCC-CeeEEec
Q 004972 385 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGA------HFFSPAHVM-PLLEIVR 457 (721)
Q Consensus 385 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~~l~~~~~~~~r~ig~------h~~~p~~~~-~lvEiv~ 457 (721)
+|+||.||+ .....++++++.++++++++|++...++...+. ++ ..++++. ....|-..- ..-.+..
T Consensus 63 ~D~vilavk--~~~~~~~l~~l~~~l~~~~~iv~~~nGi~~~~~---~~-~~~v~~g~~~~~a~~~~pg~v~~~~~~~~~ 136 (294)
T 3g17_A 63 FDVIIIAVK--THQLDAVIPHLTYLAHEDTLIILAQNGYGQLEH---IP-FKNVCQAVVYISGQKKGDVVTHFRDYQLRI 136 (294)
T ss_dssp EEEEEECSC--GGGHHHHGGGHHHHEEEEEEEEECCSSCCCGGG---CC-CSCEEECEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCEEEEeCC--ccCHHHHHHHHHHhhCCCCEEEEeccCcccHhh---CC-CCcEEEEEEEEEEEEcCCCEEEECCCEEec
Confidence 999999998 777888999999999999999998888877654 32 2344332 111221110 0011111
Q ss_pred CCCCCHHHHHHHHHHHHHcCCeeEEEcCCCchhhhhhhhHH
Q 004972 458 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPY 498 (721)
Q Consensus 458 ~~~t~~e~~~~~~~l~~~lG~~~v~v~d~~gfi~nRl~~~~ 498 (721)
+ +.+..+.+.+++..-|-...+..|..+.....++...
T Consensus 137 ~---~~~~~~~l~~~l~~~~~~~~~~~di~~~~w~Kl~~N~ 174 (294)
T 3g17_A 137 Q---DNALTRQFRDLVQDSQIDIVLEANIQQAIWYKLLVNL 174 (294)
T ss_dssp E---CSHHHHHHHHHTTTSSCEEEEESSHHHHHHHHHHHHH
T ss_pred C---ccHHHHHHHHHHHhCCCceEEChHHHHHHHHHHHHHH
Confidence 1 3456777888888878777777776665555554433
No 212
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=98.52 E-value=3.1e-08 Score=102.42 Aligned_cols=125 Identities=10% Similarity=-0.022 Sum_probs=86.7
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cccCC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 384 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 384 (721)
++|+|||+|.||.++|..+...|++|++||++++..+ .....+++ +.+++
T Consensus 123 ~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~-----------------------------~~~~~~~l~ell~~ 173 (290)
T 3gvx_A 123 KALGILGYGGIGRRVAHLAKAFGMRVIAYTRSSVDQN-----------------------------VDVISESPADLFRQ 173 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEECSSCCCTT-----------------------------CSEECSSHHHHHHH
T ss_pred chheeeccCchhHHHHHHHHhhCcEEEEEeccccccc-----------------------------cccccCChHHHhhc
Confidence 5899999999999999999999999999999875411 02233345 55789
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCC--CHHHHhcccC-CCCcEEEecCC-----CCCCCCCeeEEe
Q 004972 385 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI--DLNIVGEKTS-SQDRIIGAHFF-----SPAHVMPLLEIV 456 (721)
Q Consensus 385 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~--~i~~l~~~~~-~~~r~ig~h~~-----~p~~~~~lvEiv 456 (721)
||+|+.++|.+.+...-+-++..+.++++++|+..+.+- ....+.+.+. ..-...++..| +|.+..+.+-++
T Consensus 174 aDiV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~ga~lDV~~~EP~~pL~~~~nvilT 253 (290)
T 3gvx_A 174 SDFVLIAIPLTDKTRGMVNSRLLANARKNLTIVNVARADVVSKPDMIGFLKERSDVWYLSDVWWNEPEITETNLRNAILS 253 (290)
T ss_dssp CSEEEECCCCCTTTTTCBSHHHHTTCCTTCEEEECSCGGGBCHHHHHHHHHHCTTCEEEESCCTTTTSCCSCCCSSEEEC
T ss_pred cCeEEEEeeccccchhhhhHHHHhhhhcCceEEEeehhcccCCcchhhhhhhccceEEeeccccCCcccchhhhhhhhcC
Confidence 999999999666654444466777889999987655443 3345555543 23344555544 444555667777
Q ss_pred cCC
Q 004972 457 RTE 459 (721)
Q Consensus 457 ~~~ 459 (721)
|+-
T Consensus 254 PHi 256 (290)
T 3gvx_A 254 PHV 256 (290)
T ss_dssp CSC
T ss_pred ccc
Confidence 763
No 213
>2w3p_A Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ring cleaving, burkholderia xenovorans LB400 crotonase; 1.50A {Burkholderia xenovorans}
Probab=98.51 E-value=6.1e-07 Score=98.34 Aligned_cols=197 Identities=16% Similarity=0.188 Sum_probs=145.0
Q ss_pred CCcEEEEEe-cCcEEEEEeCCCC---C-----------CCCCHHHHHHHHHHHHHHh-cCCCceEEEEEeCCCCCcCCCC
Q 004972 3 APRVTMEVG-NDGVAIITLINPP---V-----------NALAIPIVAGLKDKFEEAT-SRDDVKAIVLTGNGGRFSGGFD 66 (721)
Q Consensus 3 ~~~v~~~~~-~~~v~~i~l~~p~---~-----------Nal~~~~~~~l~~~l~~~~-~~~~v~~vVltg~g~~F~aG~D 66 (721)
|+.+...++ ..+++.++...|. . +.....|-.||.+++..+. ++.++...++...|+.
T Consensus 265 y~~~~~ai~ra~r~a~~~~~g~~~a~~~~ld~i~aa~~~~~~l~~~~el~~All~l~~ne~~~~~~~~~t~g~~------ 338 (556)
T 2w3p_A 265 YKTLDVTIDRAKRIATFTAKAPQTEPPASIDAIVAAGANWWPLKFAREFDDAILSMRTNELAVGTWVFRTEGDA------ 338 (556)
T ss_dssp ETTEEEEEETTTTEEEEEEECCSSCCCCSHHHHHHHGGGSHHHHHHHHHHHHHHHHHHHCSSCCEEEEEEESCH------
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCchhhHHHHHHhhhcchhhhhhhHHHHHHHhhhhccHHHhHhhhhccCCH------
Confidence 344555554 5668889987762 1 4445678899977776665 6788999998776532
Q ss_pred chhhh-------hccCCCcccccchHHHHHHHHHHhhCCCcEEEEE-CCcccccc-hHhhhhcCEEEeeC-------Cce
Q 004972 67 INVFQ-------KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAV-EGLALGGG-LELAMGCHARIAAP-------KTQ 130 (721)
Q Consensus 67 l~~~~-------~~~~~~~~~~~~~~~~~~~~~~l~~~~~p~Iaav-~G~a~GgG-~~lalacD~ria~~-------~a~ 130 (721)
..+. ...+.+-+.+...++.+.+ .++.....-++|.| .|.|+.|- +||+++||..++-+ .+.
T Consensus 339 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~r~d~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~~~~~~~~~~~ 416 (556)
T 2w3p_A 339 -RHLLAADASLMQHKDHWFVRETIGLLRRTL-ARIDVSSRSLFALIEPGSCFAGTFAELAFAADRTYMAALPANEDEEPA 416 (556)
T ss_dssp -HHHHHHHHHHHHTTTSHHHHHHHHHHHHHH-HHHHTCSSEEEEEECTTCCEEGGGHHHHHTSSEEEECCCTTCTTTSCC
T ss_pred -HHHhhhHHHHHhccchHHHHHHHHHHHHHH-HHhcccchhheeeecCCcchHHHHHHHHHHhhhhhhhcCCCCCCCCce
Confidence 2221 1122222344455566666 56778888999999 79998886 49999999999962 488
Q ss_pred EeCcccccCcccc----ccccccccCHHHHHHHH--HcCCCcCHHHHHHcCCccEEcCCchHHHHHHHHHHHHHhcCchh
Q 004972 131 LGLPELTLGVIPG----TQRLPRLVGLSKAIEMM--LLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPW 204 (721)
Q Consensus 131 ~~~pe~~~Gl~P~----~~~l~r~~G~~~a~~l~--ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~~~~ 204 (721)
+.+.+.++|.+|- +..-.|..|.....+.+ ..|+++++++|.++|||+...++-+++++++-..++-++.||.+
T Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 496 (556)
T 2w3p_A 417 ITLSEVNFGLYPMVTHQSRLARRFYEETEPLDAVRSRIGQAIKPVEAERLGLVTASPDDIDWADEIRIALEERAAMSPDA 496 (556)
T ss_dssp EECCGGGGTTSCCTTSSCHHHHHTTTCHHHHHHHHTTTTSCBCHHHHHHTTSSSBCCCTTTHHHHHHHHHHHHHHSCHHH
T ss_pred eEeeccccCcccCCCchhHHHHHhcCCcchHHHHHHHhCCCCCHHHHHhcCCeecCcccCChHHHHHHHHHHHhccCcch
Confidence 9999999999996 33334556665555433 46999999999999999999999999999999999999999876
Q ss_pred hhh
Q 004972 205 IRS 207 (721)
Q Consensus 205 ~~~ 207 (721)
+.-
T Consensus 497 ~~~ 499 (556)
T 2w3p_A 497 LTG 499 (556)
T ss_dssp HHH
T ss_pred hcc
Confidence 543
No 214
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=98.49 E-value=2.8e-07 Score=96.96 Aligned_cols=104 Identities=27% Similarity=0.336 Sum_probs=71.1
Q ss_pred CCceeEEEEcCCCCcHHHHHHHHHCCC--ceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCce-eccCc
Q 004972 303 RGVRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLK-GVLDY 379 (721)
Q Consensus 303 ~~~~kI~VIG~G~mG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~-~~~~~ 379 (721)
+..+||+|||+|.||.++|..++..|+ +|+++|+++++++.....+.+... ... ..+. .++++
T Consensus 3 ~~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~-~~~-------------~~v~i~~~~~ 68 (326)
T 3pqe_A 3 KHVNKVALIGAGFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKA-FAP-------------QPVKTSYGTY 68 (326)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGG-GSS-------------SCCEEEEECG
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccc-ccc-------------CCeEEEeCcH
Confidence 446799999999999999999999997 899999999887754333332211 000 1122 24567
Q ss_pred cccCCCCEEEEcccC--------------ChHHHHHHHHHHHhhCCCCeEEEecCC
Q 004972 380 SEFKDVDMVIEAVIE--------------SVPLKQKIFSELEKACPPHCILATNTS 421 (721)
Q Consensus 380 ~~l~~aDlVIeavpe--------------~~~~k~~v~~~l~~~~~~~~ii~s~ts 421 (721)
+++++||+||.++.. +..+.+++.+.+.++++ +++++..|.
T Consensus 69 ~a~~~aDvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p-~a~vlvvtN 123 (326)
T 3pqe_A 69 EDCKDADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGF-DGIFLVATN 123 (326)
T ss_dssp GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTC-CSEEEECSS
T ss_pred HHhCCCCEEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcC-CeEEEEcCC
Confidence 889999999999842 22345566667777764 566654443
No 215
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=98.46 E-value=2.8e-07 Score=96.97 Aligned_cols=105 Identities=19% Similarity=0.251 Sum_probs=73.4
Q ss_pred CCceeEEEEcCCCCcHHHHHHHHHCCC--ceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCcc
Q 004972 303 RGVRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS 380 (721)
Q Consensus 303 ~~~~kI~VIG~G~mG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~ 380 (721)
.+.+||+|||+|.||.++|..++..|+ +|+++|+++++++.....+.+... . . ....+..+++++
T Consensus 17 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~--~--~---------~~~~i~~~~d~~ 83 (331)
T 4aj2_A 17 VPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSL--F--L---------KTPKIVSSKDYS 83 (331)
T ss_dssp CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGG--G--C---------SCCEEEECSSGG
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhh--c--c---------CCCeEEEcCCHH
Confidence 346799999999999999999999998 899999998876654333322110 0 0 012355577888
Q ss_pred ccCCCCEEEEccc--------------CChHHHHHHHHHHHhhCCCCeEEEecCC
Q 004972 381 EFKDVDMVIEAVI--------------ESVPLKQKIFSELEKACPPHCILATNTS 421 (721)
Q Consensus 381 ~l~~aDlVIeavp--------------e~~~~k~~v~~~l~~~~~~~~ii~s~ts 421 (721)
++++||+||.+.- .+..+.+++.+.+.+++ |+++++..|.
T Consensus 84 ~~~~aDiVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~-p~a~vlvvtN 137 (331)
T 4aj2_A 84 VTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYS-PQCKLLIVSN 137 (331)
T ss_dssp GGTTEEEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTCEEEECSS
T ss_pred HhCCCCEEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecC
Confidence 8999999998862 13346667777788885 5555554443
No 216
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=98.44 E-value=1.5e-07 Score=105.92 Aligned_cols=149 Identities=13% Similarity=0.094 Sum_probs=95.4
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cccCC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 384 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 384 (721)
++|+|||+|.||+++|..+...|++|++||++... +.+. +.| +... ++ +.+++
T Consensus 143 ~~vgIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~-----------~~g-------------~~~~-~l~e~~~~ 196 (529)
T 1ygy_A 143 KTVGVVGLGRIGQLVAQRIAAFGAYVVAYDPYVSP-ARAA-----------QLG-------------IELL-SLDDLLAR 196 (529)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCH-HHHH-----------HHT-------------CEEC-CHHHHHHH
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCEEEEECCCCCh-hHHH-----------hcC-------------cEEc-CHHHHHhc
Confidence 68999999999999999999999999999998642 2211 111 1222 34 55789
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHH--HhcccCCC-C-----cEEEecCC--CCCCCCCeeE
Q 004972 385 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI--VGEKTSSQ-D-----RIIGAHFF--SPAHVMPLLE 454 (721)
Q Consensus 385 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~~--l~~~~~~~-~-----r~ig~h~~--~p~~~~~lvE 454 (721)
||+|+.|+|.+.+...-+-+++.+.+++++++++.+.+-.+.+ +.+.+... - .|++.||. +|-+..+.+-
T Consensus 197 aDvV~l~~P~~~~t~~~i~~~~~~~~k~g~ilin~arg~iv~~~aL~~al~~g~i~ga~lDv~~~eP~~~~~L~~~~~vi 276 (529)
T 1ygy_A 197 ADFISVHLPKTPETAGLIDKEALAKTKPGVIIVNAARGGLVDEAALADAITGGHVRAAGLDVFATEPCTDSPLFELAQVV 276 (529)
T ss_dssp CSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHTSSEEEEEESSCSSSSCSCCGGGGCTTEE
T ss_pred CCEEEECCCCchHHHHHhCHHHHhCCCCCCEEEECCCCchhhHHHHHHHHHcCCccEEEEeeccCCCCCCchHHhCCCEE
Confidence 9999999996544333222336677899999987666544443 43444321 1 23333442 2223345566
Q ss_pred EecCCC-CCHHHHHH-----HHHHHHHcCCee
Q 004972 455 IVRTER-TSAQVILD-----LMTVGKIIKKVP 480 (721)
Q Consensus 455 iv~~~~-t~~e~~~~-----~~~l~~~lG~~~ 480 (721)
++|+.. +++++.+. +..+.+.++..+
T Consensus 277 lTPh~~~~t~ea~~~~~~~~~~~l~~~l~~~~ 308 (529)
T 1ygy_A 277 VTPHLGASTAEAQDRAGTDVAESVRLALAGEF 308 (529)
T ss_dssp ECSSCSSCBHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred EccccCCCCHHHHHHHHHHHHHHHHHHHcCCC
Confidence 888877 67777665 666666666544
No 217
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=98.44 E-value=2.6e-07 Score=97.28 Aligned_cols=139 Identities=12% Similarity=0.057 Sum_probs=86.6
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeC-CHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cccC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEV-NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 383 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~ 383 (721)
++|+|||+|.||.++|..+...|++|++||+ +++.. .+. +.| +...+++ +.++
T Consensus 147 ~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~-~~~-----------~~g-------------~~~~~~l~ell~ 201 (320)
T 1gdh_A 147 KTLGIYGFGSIGQALAKRAQGFDMDIDYFDTHRASSS-DEA-----------SYQ-------------ATFHDSLDSLLS 201 (320)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCCHH-HHH-----------HHT-------------CEECSSHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcChh-hhh-----------hcC-------------cEEcCCHHHHHh
Confidence 5899999999999999999999999999999 87652 111 011 2223344 5578
Q ss_pred CCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCC--CCHHHHhcccCCC-CcEEEecCC--CC-----CCCCCee
Q 004972 384 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST--IDLNIVGEKTSSQ-DRIIGAHFF--SP-----AHVMPLL 453 (721)
Q Consensus 384 ~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~--~~i~~l~~~~~~~-~r~ig~h~~--~p-----~~~~~lv 453 (721)
+||+|+.++|.+.+...-+-++..+.++++++|++.+++ +....+.+.+... -.-.++.+| .| -+..+.+
T Consensus 202 ~aDvVil~~p~~~~t~~~i~~~~l~~mk~gailIn~arg~~vd~~aL~~aL~~g~i~gA~lDv~~~eP~~~~~L~~~~nv 281 (320)
T 1gdh_A 202 VSQFFSLNAPSTPETRYFFNKATIKSLPQGAIVVNTARGDLVDNELVVAALEAGRLAYAGFDVFAGEPNINEGYYDLPNT 281 (320)
T ss_dssp HCSEEEECCCCCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTTTSCCTTGGGCTTE
T ss_pred hCCEEEEeccCchHHHhhcCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCCcEEEEeCCCCCCCCCChhhhCCCE
Confidence 999999999966553332224456778999998866655 3334555554321 122234444 22 2334456
Q ss_pred EEecCCCC-CHHHHHHH
Q 004972 454 EIVRTERT-SAQVILDL 469 (721)
Q Consensus 454 Eiv~~~~t-~~e~~~~~ 469 (721)
-++|+... +.++.+.+
T Consensus 282 iltPH~~~~t~~~~~~~ 298 (320)
T 1gdh_A 282 FLFPHIGSAATQAREDM 298 (320)
T ss_dssp EECSSCTTCBHHHHHHH
T ss_pred EECCcCCcCcHHHHHHH
Confidence 67776543 34444333
No 218
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=98.38 E-value=1.2e-06 Score=90.59 Aligned_cols=104 Identities=17% Similarity=0.281 Sum_probs=71.4
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCC--ceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCccccC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 383 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~ 383 (721)
+||+|||+|.+|.++|..++.++. +++++|++++.++.-...+.+.... .. ....+..++++++++
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~-~~-----------~~~~i~~~~d~~~~~ 68 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAG-ID-----------KYPKIVGGADYSLLK 68 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGG-GT-----------CCCEEEEESCGGGGT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhccccc-CC-----------CCCeEecCCCHHHhC
Confidence 589999999999999999998876 8999999987765433222221110 00 012355677889999
Q ss_pred CCCEEEEccc--------------CChHHHHHHHHHHHhhCCCCeEEEecCCC
Q 004972 384 DVDMVIEAVI--------------ESVPLKQKIFSELEKACPPHCILATNTST 422 (721)
Q Consensus 384 ~aDlVIeavp--------------e~~~~k~~v~~~l~~~~~~~~ii~s~ts~ 422 (721)
+||+||.+.- .|..+.+++.+++.++++. ++++..|..
T Consensus 69 ~aDvVvitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~~p~-aivlvvsNP 120 (294)
T 2x0j_A 69 GSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPE-SKILVVTNP 120 (294)
T ss_dssp TCSEEEECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTTSTT-CEEEECSSS
T ss_pred CCCEEEEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhcCCc-eEEEEecCc
Confidence 9999998762 1455667777778887654 555544444
No 219
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=98.37 E-value=2.3e-07 Score=97.49 Aligned_cols=128 Identities=10% Similarity=0.050 Sum_probs=85.1
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cccCC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 384 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 384 (721)
++|||||+|.||.++|..+...|++|++||++++..+.. .......++ +.+++
T Consensus 138 ktvGIiGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~--------------------------~~~~~~~~l~ell~~ 191 (324)
T 3evt_A 138 QQLLIYGTGQIGQSLAAKASALGMHVIGVNTTGHPADHF--------------------------HETVAFTATADALAT 191 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCCCCTTC--------------------------SEEEEGGGCHHHHHH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCEEEEECCCcchhHhH--------------------------hhccccCCHHHHHhh
Confidence 589999999999999999999999999999986542110 011112344 55789
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCC--CCHHHHhcccC-CCCcEEEecCCC--------CCCCCCee
Q 004972 385 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST--IDLNIVGEKTS-SQDRIIGAHFFS--------PAHVMPLL 453 (721)
Q Consensus 385 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~--~~i~~l~~~~~-~~~r~ig~h~~~--------p~~~~~lv 453 (721)
||+|+.++|-+.+...-+-++....++++++|+..+.+ +....+.+.+. ..-...++..|. |-+..+.|
T Consensus 192 aDvV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~nv 271 (324)
T 3evt_A 192 ANFIVNALPLTPTTHHLFSTELFQQTKQQPMLINIGRGPAVDTTALMTALDHHQLSMAALDVTEPEPLPTDHPLWQRDDV 271 (324)
T ss_dssp CSEEEECCCCCGGGTTCBSHHHHHTCCSCCEEEECSCGGGBCHHHHHHHHHTTSCSEEEESSCSSSSCCTTCGGGGCSSE
T ss_pred CCEEEEcCCCchHHHHhcCHHHHhcCCCCCEEEEcCCChhhhHHHHHHHHHhCCceEEEeCCCCCCCCCCCChhhcCCCE
Confidence 99999999977665544446667778999988754444 33345555553 223344555443 22334556
Q ss_pred EEecCC
Q 004972 454 EIVRTE 459 (721)
Q Consensus 454 Eiv~~~ 459 (721)
-++|+-
T Consensus 272 ilTPHi 277 (324)
T 3evt_A 272 LITPHI 277 (324)
T ss_dssp EECCSC
T ss_pred EEcCcc
Confidence 677753
No 220
>3qwd_A ATP-dependent CLP protease proteolytic subunit; caseinolytic protease, serin-protease, hydrolase; 2.10A {Staphylococcus aureus subsp} SCOP: c.14.1.1 PDB: 3v5e_A 3v5i_A 3sta_V 3st9_A
Probab=98.35 E-value=2.9e-06 Score=82.56 Aligned_cols=136 Identities=22% Similarity=0.237 Sum_probs=98.5
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccCCCcccccchHHHHHHHHHHhhCCCcEEEEEC
Q 004972 27 ALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVE 106 (721)
Q Consensus 27 al~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~p~Iaav~ 106 (721)
.++..+.+.+.+.|..++.++..+.|+|.=. |.|+++. ....++ +.|...++||++.+.
T Consensus 35 ~I~~~~a~~i~~~L~~l~~~~~~~~I~l~In----SPGG~v~----------------~~~~I~-~~i~~~~~~V~t~~~ 93 (203)
T 3qwd_A 35 QIDDNVANSIVSQLLFLQAQDSEKDIYLYIN----SPGGSVT----------------AGFAIY-DTIQHIKPDVQTICI 93 (203)
T ss_dssp CBCHHHHHHHHHHHHHHHHHCSSSCEEEEEE----ECCBCHH----------------HHHHHH-HHHHHSSSCEEEEEE
T ss_pred EECHHHHHHHHHHHHHHHhcCCCCCEEEEEe----CCCCCHH----------------HHHHHH-HHHHHhcCCcEEEEe
Confidence 4889999999999999987766666666321 2233321 122444 667889999999999
Q ss_pred CcccccchHhhhhcC--EEEeeCCceEeCcccccCcccc--c------cc-----------cccc--cCHHHHHHHHHcC
Q 004972 107 GLALGGGLELAMGCH--ARIAAPKTQLGLPELTLGVIPG--T------QR-----------LPRL--VGLSKAIEMMLLS 163 (721)
Q Consensus 107 G~a~GgG~~lalacD--~ria~~~a~~~~pe~~~Gl~P~--~------~~-----------l~r~--~G~~~a~~l~ltg 163 (721)
|.|.++|.-++++|| .|++.+++.|.+....-| .-| + .. +.+. .......+++-..
T Consensus 94 G~AaSag~~i~~ag~~g~r~~~p~a~imiHqP~~~-~~G~a~di~~~a~~l~~~~~~~~~~~a~~tG~~~e~i~~~~~~d 172 (203)
T 3qwd_A 94 GMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGG-AQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRD 172 (203)
T ss_dssp EEEETHHHHHHHTSCTTCEEECTTCEEECCCCSSS-TTTTSCHHHHHHHHHTTHHHHHHHHHHHHHCCCHHHHHHHHTSC
T ss_pred eeehhHHHHHHHcCCcCeEEEcCCceEEEeccccc-ccCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhhcC
Confidence 999999999999999 699999999998655433 222 0 00 1111 2344555666677
Q ss_pred CCcCHHHHHHcCCccEEcCCc
Q 004972 164 KSITSEEGWKLGLIDAVVTSE 184 (721)
Q Consensus 164 ~~~~a~eA~~~Glv~~vv~~~ 184 (721)
..++|+||++.||||+|+...
T Consensus 173 ~~lta~EA~e~GliD~I~~~~ 193 (203)
T 3qwd_A 173 NFLTAEEAKEYGLIDEVMVPE 193 (203)
T ss_dssp CCEEHHHHHHHTSCSEECCCC
T ss_pred ceecHHHHHHcCCcCEecCCc
Confidence 789999999999999999654
No 221
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=98.35 E-value=3.7e-07 Score=96.44 Aligned_cols=110 Identities=16% Similarity=0.102 Sum_probs=66.3
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cccCC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 384 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 384 (721)
++|||||+|.||.++|..+...|++|++||++++.. . ......++ +.+++
T Consensus 172 ktiGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~----------------~-------------~~~~~~sl~ell~~ 222 (340)
T 4dgs_A 172 KRIGVLGLGQIGRALASRAEAFGMSVRYWNRSTLSG----------------V-------------DWIAHQSPVDLARD 222 (340)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCTT----------------S-------------CCEECSSHHHHHHT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCcccc----------------c-------------CceecCCHHHHHhc
Confidence 589999999999999999999999999999987530 0 11223344 56789
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHH--HHhcccCC-CCcEEEecCC
Q 004972 385 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTSS-QDRIIGAHFF 444 (721)
Q Consensus 385 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~--~l~~~~~~-~~r~ig~h~~ 444 (721)
||+|+.++|.+.+...-+-++..+.++++++|+..+.+-.+. .+.+.+.. .-...++..|
T Consensus 223 aDvVil~vP~t~~t~~li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g~i~gA~LDVf 285 (340)
T 4dgs_A 223 SDVLAVCVAASAATQNIVDASLLQALGPEGIVVNVARGNVVDEDALIEALKSGTIAGAGLDVF 285 (340)
T ss_dssp CSEEEECC----------CHHHHHHTTTTCEEEECSCC--------------CCSSEEEESCC
T ss_pred CCEEEEeCCCCHHHHHHhhHHHHhcCCCCCEEEECCCCcccCHHHHHHHHHcCCceEEEeCCc
Confidence 999999999766655555467777889999987655553333 44444432 2234555554
No 222
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=98.33 E-value=4.4e-07 Score=96.35 Aligned_cols=104 Identities=11% Similarity=0.062 Sum_probs=73.1
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cccCC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 384 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 384 (721)
++|+|||+|.||..+|..+...|++|+.||+++...+.+.. . .+...+++ +.+++
T Consensus 165 ktvGIIG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~-----------~-------------g~~~~~~l~ell~~ 220 (351)
T 3jtm_A 165 KTIGTVGAGRIGKLLLQRLKPFGCNLLYHDRLQMAPELEKE-----------T-------------GAKFVEDLNEMLPK 220 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGCCEEEEECSSCCCHHHHHH-----------H-------------CCEECSCHHHHGGG
T ss_pred CEEeEEEeCHHHHHHHHHHHHCCCEEEEeCCCccCHHHHHh-----------C-------------CCeEcCCHHHHHhc
Confidence 58999999999999999999999999999998643332210 0 12333445 56789
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCC--CCHHHHhcccC
Q 004972 385 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST--IDLNIVGEKTS 433 (721)
Q Consensus 385 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~--~~i~~l~~~~~ 433 (721)
||+|+.++|-..+...-+-++..+.++++++|+..+.+ +....+.+.+.
T Consensus 221 aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~ 271 (351)
T 3jtm_A 221 CDVIVINMPLTEKTRGMFNKELIGKLKKGVLIVNNARGAIMERQAVVDAVE 271 (351)
T ss_dssp CSEEEECSCCCTTTTTCBSHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred CCEEEECCCCCHHHHHhhcHHHHhcCCCCCEEEECcCchhhCHHHHHHHHH
Confidence 99999999966555444445666778999998754444 33345555543
No 223
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=98.33 E-value=6.3e-07 Score=93.71 Aligned_cols=136 Identities=16% Similarity=0.090 Sum_probs=85.1
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cccCC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 384 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 384 (721)
++|+|||+|.||.++|..+...|++|++||++++. +.+. +.| +... ++ +.+++
T Consensus 143 ~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~-~~~~-----------~~g-------------~~~~-~l~ell~~ 196 (307)
T 1wwk_A 143 KTIGIIGFGRIGYQVAKIANALGMNILLYDPYPNE-ERAK-----------EVN-------------GKFV-DLETLLKE 196 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH-HHHH-----------HTT-------------CEEC-CHHHHHHH
T ss_pred ceEEEEccCHHHHHHHHHHHHCCCEEEEECCCCCh-hhHh-----------hcC-------------cccc-CHHHHHhh
Confidence 58999999999999999999999999999998865 2211 111 1222 34 45688
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCH--HHHhcccC-CCCcEEEecCCC--C------CCCCCee
Q 004972 385 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--NIVGEKTS-SQDRIIGAHFFS--P------AHVMPLL 453 (721)
Q Consensus 385 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i--~~l~~~~~-~~~r~ig~h~~~--p------~~~~~lv 453 (721)
||+|+.++|.+.+...-+-.+..+.++++++++..+++-.+ ..+.+.+. ..-.-.++.+|. | -+..+.+
T Consensus 197 aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~arg~~vd~~aL~~aL~~g~i~ga~lDv~~~eP~~~~~~L~~~~nv 276 (307)
T 1wwk_A 197 SDVVTIHVPLVESTYHLINEERLKLMKKTAILINTSRGPVVDTNALVKALKEGWIAGAGLDVFEEEPLPKDHPLTKFDNV 276 (307)
T ss_dssp CSEEEECCCCSTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESCCSSSSCCTTCGGGGCTTE
T ss_pred CCEEEEecCCChHHhhhcCHHHHhcCCCCeEEEECCCCcccCHHHHHHHHHhCCCcEEEEecCCCCCCCCCChHHhCCCE
Confidence 99999999966654332224455678999988765554333 34444443 222334444443 2 2334556
Q ss_pred EEecCCCC-CHHHHH
Q 004972 454 EIVRTERT-SAQVIL 467 (721)
Q Consensus 454 Eiv~~~~t-~~e~~~ 467 (721)
-++|+... +.+...
T Consensus 277 iltPh~~~~t~~~~~ 291 (307)
T 1wwk_A 277 VLTPHIGASTVEAQE 291 (307)
T ss_dssp EECSSCTTCBHHHHH
T ss_pred EECCccccCcHHHHH
Confidence 67776543 344433
No 224
>2f6i_A ATP-dependent CLP protease, putative; structural genomics, structural genomics conso SGC, hydrolase; 2.45A {Plasmodium falciparum} SCOP: c.14.1.1
Probab=98.33 E-value=3e-06 Score=83.44 Aligned_cols=135 Identities=14% Similarity=0.105 Sum_probs=93.8
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccCCCcccccchHHHHHHHHHHhhCCCcEEEEEC
Q 004972 27 ALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVE 106 (721)
Q Consensus 27 al~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~p~Iaav~ 106 (721)
.++..+.+.+.+.|..++.++. +.|+|.=. |.|+++. ....++ +.|...++|+++.+.
T Consensus 47 ~I~~~~a~~i~~~L~~l~~~~~-k~I~l~IN----SPGGsv~----------------a~~~I~-~~i~~~~~pV~t~v~ 104 (215)
T 2f6i_A 47 EINKKTADELISQLLYLDNINH-NDIKIYIN----SPGGSIN----------------EGLAIL-DIFNYIKSDIQTISF 104 (215)
T ss_dssp CBCHHHHHHHHHHHHHHHHHCC-SCEEEEEE----ECCBCHH----------------HHHHHH-HHHHHSSSCEEEEEE
T ss_pred EECHHHHHHHHHHHHHHHhCCC-CcEEEEEE----CCCCCHH----------------HHHHHH-HHHHhcCCCEEEEEe
Confidence 3778888999999998876555 66666421 2233321 122444 667889999999999
Q ss_pred CcccccchHhhhhcCE--EEeeCCceEeCcccccCccc---ccc---------------cccc--ccCHHHHHHHHHcCC
Q 004972 107 GLALGGGLELAMGCHA--RIAAPKTQLGLPELTLGVIP---GTQ---------------RLPR--LVGLSKAIEMMLLSK 164 (721)
Q Consensus 107 G~a~GgG~~lalacD~--ria~~~a~~~~pe~~~Gl~P---~~~---------------~l~r--~~G~~~a~~l~ltg~ 164 (721)
|.|..+|.-++++||. |+|.+++.+++.....|... +.. .+.+ -.......+++-.+.
T Consensus 105 g~AAS~g~~Ia~agd~g~i~a~p~s~i~ih~p~~~~~G~~~di~~~~~el~~~~~~i~~~ya~~~g~~~e~i~~~~~~~~ 184 (215)
T 2f6i_A 105 GLVASMASVILASGKKGKRKSLPNCRIMIHQPLGNAFGHPQDIEIQTKEILYLKKLLYHYLSSFTNQTVETIEKDSDRDY 184 (215)
T ss_dssp EEECHHHHHHHHTSCTTCEEECTTCEEESSCTTCSCC--------CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHTTC
T ss_pred eEhHhHHHHHHHcCCcccEEEcCCCEEEEeccccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHhCCe
Confidence 9999999999999999 99999999998765433211 100 0011 123445555555566
Q ss_pred CcCHHHHHHcCCccEEcCC
Q 004972 165 SITSEEGWKLGLIDAVVTS 183 (721)
Q Consensus 165 ~~~a~eA~~~Glv~~vv~~ 183 (721)
.++|+||+++||||++.+.
T Consensus 185 ~lta~eA~e~GLiD~I~~~ 203 (215)
T 2f6i_A 185 YMNALEAKQYGIIDEVIET 203 (215)
T ss_dssp EECHHHHHHHTSCSEECCC
T ss_pred ecCHHHHHHCCCCCEecCC
Confidence 7899999999999999854
No 225
>1yg6_A ATP-dependent CLP protease proteolytic subunit; endopeptidase CLP, caseinolytic protease, protease TI, heat shock protein F21.5, hydrolase; 1.90A {Escherichia coli} SCOP: c.14.1.1 PDB: 1tyf_A 2fzs_A* 3mt6_R 1yg8_A 3hln_A 2zl2_A 2zl0_A 2zl4_A 2zl3_A 3tt7_A* 3tt6_A 3ktg_A 3kth_A 3kti_A* 3ktj_A* 3ktk_A* 3q7h_A
Probab=98.31 E-value=1.1e-06 Score=85.37 Aligned_cols=136 Identities=15% Similarity=0.123 Sum_probs=96.4
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccCCCcccccchHHHHHHHHHHhhCCCcEEEEEC
Q 004972 27 ALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVE 106 (721)
Q Consensus 27 al~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~p~Iaav~ 106 (721)
.++..+.+.+.+.|..++.+++.+.|+|.=. |.|+++. ....++ +.|..+++|+++.+.
T Consensus 34 ~I~~~~a~~i~~~L~~l~~~~~~~~I~l~In----SPGG~v~----------------a~~~I~-~~i~~~~~pV~~~v~ 92 (193)
T 1yg6_A 34 QVEDHMANLIVAQMLFLEAENPEKDIYLYIN----SPGGVIT----------------AGMSIY-DTMQFIKPDVSTICM 92 (193)
T ss_dssp SBCHHHHHHHHHHHHHHHHHCSSSCEEEEEE----ECCBCHH----------------HHHHHH-HHHHHSSSCEEEEEE
T ss_pred EEcHHHHHHHHHHHHHHHhcCCCCCEEEEEE----CcCCCHH----------------HHHHHH-HHHHhcCCCEEEEEe
Confidence 3788899999999999987766777777421 2233321 122444 667889999999999
Q ss_pred CcccccchHhhhhcCE--EEeeCCceEeCcccccCccc---cc---------------cccccc--cCHHHHHHHHHcCC
Q 004972 107 GLALGGGLELAMGCHA--RIAAPKTQLGLPELTLGVIP---GT---------------QRLPRL--VGLSKAIEMMLLSK 164 (721)
Q Consensus 107 G~a~GgG~~lalacD~--ria~~~a~~~~pe~~~Gl~P---~~---------------~~l~r~--~G~~~a~~l~ltg~ 164 (721)
|.|..+|.-++++||. |++.+++.++......|... +. ..+.+. .......+++-.+.
T Consensus 93 g~AaS~g~~Ia~ag~~~~r~a~p~s~i~ih~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~~g~~~~~i~~~~~~~~ 172 (193)
T 1yg6_A 93 GQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDR 172 (193)
T ss_dssp EEEETHHHHHHHTSCTTCEEECTTCEEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTSSCE
T ss_pred eeHHHHHHHHHHCCCcCcEEEecCcEEEEEeccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhcCCe
Confidence 9999999999999999 99999999988665433211 00 011122 23344445554566
Q ss_pred CcCHHHHHHcCCccEEcCC
Q 004972 165 SITSEEGWKLGLIDAVVTS 183 (721)
Q Consensus 165 ~~~a~eA~~~Glv~~vv~~ 183 (721)
.++++||+++||||++..+
T Consensus 173 ~~ta~eA~~~GliD~i~~~ 191 (193)
T 1yg6_A 173 FLSAPEAVEYGLVDSILTH 191 (193)
T ss_dssp EEEHHHHHHHTSSSEECCC
T ss_pred EEcHHHHHHcCCCCEecCC
Confidence 7899999999999999864
No 226
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=98.29 E-value=7.1e-07 Score=94.37 Aligned_cols=96 Identities=15% Similarity=0.196 Sum_probs=70.2
Q ss_pred CceeEEEEcC-CCCcHHHHHHHHHCCC--ceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-
Q 004972 304 GVRKVAVIGG-GLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY- 379 (721)
Q Consensus 304 ~~~kI~VIG~-G~mG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~- 379 (721)
..+||+|||+ |.+|+++|..++..|. +|+++|+++++++.....+.+. . .. ..++..++++
T Consensus 7 ~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~---~-----~~-------~~~i~~t~d~~ 71 (343)
T 3fi9_A 7 TEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHC---G-----FE-------GLNLTFTSDIK 71 (343)
T ss_dssp CSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHH---C-----CT-------TCCCEEESCHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhC---c-----CC-------CCceEEcCCHH
Confidence 3579999998 9999999999999985 8999999998766543333221 0 10 1256667776
Q ss_pred cccCCCCEEEEccc--------------CChHHHHHHHHHHHhhCCCCe
Q 004972 380 SEFKDVDMVIEAVI--------------ESVPLKQKIFSELEKACPPHC 414 (721)
Q Consensus 380 ~~l~~aDlVIeavp--------------e~~~~k~~v~~~l~~~~~~~~ 414 (721)
+++++||+||.+.- .+..+.+++.+++.+++++..
T Consensus 72 ~al~dADvVvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~ 120 (343)
T 3fi9_A 72 EALTDAKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYCPDCK 120 (343)
T ss_dssp HHHTTEEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHHHCTTCC
T ss_pred HHhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCcE
Confidence 67999999999862 234566777778888886554
No 227
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=98.28 E-value=7.9e-07 Score=92.69 Aligned_cols=132 Identities=11% Similarity=0.011 Sum_probs=86.0
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cccCC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 384 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 384 (721)
++|+|||+|.||.++|..+...|++|++||++++ +. + .....++ +.+++
T Consensus 125 ~~vgIIG~G~IG~~~A~~l~~~G~~V~~~dr~~~--~~---------------~-------------~~~~~~l~ell~~ 174 (303)
T 1qp8_A 125 EKVAVLGLGEIGTRVGKILAALGAQVRGFSRTPK--EG---------------P-------------WRFTNSLEEALRE 174 (303)
T ss_dssp CEEEEESCSTHHHHHHHHHHHTTCEEEEECSSCC--CS---------------S-------------SCCBSCSHHHHTT
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcc--cc---------------C-------------cccCCCHHHHHhh
Confidence 5899999999999999999999999999999865 10 1 0112334 55789
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCH--HHHhcccC-CCCcEEEecCC---CCC------CCCCe
Q 004972 385 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--NIVGEKTS-SQDRIIGAHFF---SPA------HVMPL 452 (721)
Q Consensus 385 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i--~~l~~~~~-~~~r~ig~h~~---~p~------~~~~l 452 (721)
||+|+.++|.+.+...-+-++..+.++++++++..+++-.+ ..+.+.+. ..-.-.|...| .|. +..+.
T Consensus 175 aDvV~l~~P~~~~t~~~i~~~~l~~mk~gailin~srg~~vd~~aL~~aL~~g~i~gA~lDv~~~~ep~~~~~~L~~~~n 254 (303)
T 1qp8_A 175 ARAAVCALPLNKHTRGLVKYQHLALMAEDAVFVNVGRAEVLDRDGVLRILKERPQFIFASDVWWGRNDFAKDAEFFSLPN 254 (303)
T ss_dssp CSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHHHHHHHCTTCEEEESCCTTTTCCGGGHHHHTSTT
T ss_pred CCEEEEeCcCchHHHHHhCHHHHhhCCCCCEEEECCCCcccCHHHHHHHHHhCCceEEEeccCCCCCCCCCCChhhcCCC
Confidence 99999999976554333324566778999998765554333 24555443 22334566666 332 22355
Q ss_pred eEEecCCCC---CHHHHH
Q 004972 453 LEIVRTERT---SAQVIL 467 (721)
Q Consensus 453 vEiv~~~~t---~~e~~~ 467 (721)
+-++|+... +.++.+
T Consensus 255 viltPH~~~~~~t~e~~~ 272 (303)
T 1qp8_A 255 VVATPWVAGGYGNERVWR 272 (303)
T ss_dssp EEECCSCSSSSSCHHHHH
T ss_pred EEECCCcCCCCCCHHHHH
Confidence 667776543 455433
No 228
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=98.28 E-value=1.1e-06 Score=93.29 Aligned_cols=136 Identities=10% Similarity=0.023 Sum_probs=86.4
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cccCC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 384 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 384 (721)
++|||||+|.||.++|..+...|++|++||++... +.+ .+.| +...+++ +.+++
T Consensus 161 ~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~~-----------~~~g-------------~~~~~~l~ell~~ 215 (352)
T 3gg9_A 161 QTLGIFGYGKIGQLVAGYGRAFGMNVLVWGRENSK-ERA-----------RADG-------------FAVAESKDALFEQ 215 (352)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSHHHH-HHH-----------HHTT-------------CEECSSHHHHHHH
T ss_pred CEEEEEeECHHHHHHHHHHHhCCCEEEEECCCCCH-HHH-----------HhcC-------------ceEeCCHHHHHhh
Confidence 58999999999999999999999999999998633 211 1111 2334455 55789
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCC--HHHHhcccC-CCCcEEEecCCC--------CCCCCCee
Q 004972 385 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID--LNIVGEKTS-SQDRIIGAHFFS--------PAHVMPLL 453 (721)
Q Consensus 385 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~--i~~l~~~~~-~~~r~ig~h~~~--------p~~~~~lv 453 (721)
||+|+.++|-+.+...-+-.+..+.++++++|+..+.+-. ...+.+.+. ..-...++..|. |-+..+.+
T Consensus 216 aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~nv 295 (352)
T 3gg9_A 216 SDVLSVHLRLNDETRSIITVADLTRMKPTALFVNTSRAELVEENGMVTALNRGRPGMAAIDVFETEPILQGHTLLRMENC 295 (352)
T ss_dssp CSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCTTHHHHHHHHTSSSEEEECCCSSSCCCSCCGGGGCTTE
T ss_pred CCEEEEeccCcHHHHHhhCHHHHhhCCCCcEEEECCCchhhcHHHHHHHHHhCCccEEEecccCCCCCCCCChhhcCCCE
Confidence 9999999997666554444566677899999875444322 234444443 222334444332 22334556
Q ss_pred EEecCCC-CCHHHH
Q 004972 454 EIVRTER-TSAQVI 466 (721)
Q Consensus 454 Eiv~~~~-t~~e~~ 466 (721)
-++|+-. .+.++.
T Consensus 296 ilTPHia~~t~e~~ 309 (352)
T 3gg9_A 296 ICTPHIGYVERESY 309 (352)
T ss_dssp EECCSCTTCBHHHH
T ss_pred EECCCCCCCCHHHH
Confidence 6777543 244433
No 229
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=98.28 E-value=1e-06 Score=93.16 Aligned_cols=102 Identities=15% Similarity=0.047 Sum_probs=72.7
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cccCC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 384 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 384 (721)
++|||||.|.||.++|..+...|++|+.||+++...+.. . .....+++ +.+++
T Consensus 174 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~-------------~-------------g~~~~~~l~ell~~ 227 (345)
T 4g2n_A 174 RRLGIFGMGRIGRAIATRARGFGLAIHYHNRTRLSHALE-------------E-------------GAIYHDTLDSLLGA 227 (345)
T ss_dssp CEEEEESCSHHHHHHHHHHHTTTCEEEEECSSCCCHHHH-------------T-------------TCEECSSHHHHHHT
T ss_pred CEEEEEEeChhHHHHHHHHHHCCCEEEEECCCCcchhhh-------------c-------------CCeEeCCHHHHHhh
Confidence 589999999999999999999999999999986432211 0 12233455 55789
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCC--CCHHHHhcccC
Q 004972 385 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST--IDLNIVGEKTS 433 (721)
Q Consensus 385 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~--~~i~~l~~~~~ 433 (721)
||+|+.++|-+.+...-+-++....++++++|+..+.+ +....+.+.+.
T Consensus 228 sDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~ 278 (345)
T 4g2n_A 228 SDIFLIAAPGRPELKGFLDHDRIAKIPEGAVVINISRGDLINDDALIEALR 278 (345)
T ss_dssp CSEEEECSCCCGGGTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred CCEEEEecCCCHHHHHHhCHHHHhhCCCCcEEEECCCCchhCHHHHHHHHH
Confidence 99999999977665544445666778999998754444 33345555543
No 230
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=98.27 E-value=3e-06 Score=92.95 Aligned_cols=123 Identities=20% Similarity=0.242 Sum_probs=79.7
Q ss_pred eeEEEEcCCCC-cHHHHHHHHHC-----CCceEEEeCCH--HHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceecc
Q 004972 306 RKVAVIGGGLM-GSGIATAHILN-----NIYVVLKEVNS--EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL 377 (721)
Q Consensus 306 ~kI~VIG~G~m-G~~iA~~la~~-----G~~V~l~d~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~ 377 (721)
+||+|||+|.+ |.+++..|+.. +.+|++||+++ ++++...+.....++ ..+ . ..++..++
T Consensus 8 ~KIaVIGaGsv~~~al~~~L~~~~~~l~~~ev~L~Di~~~~e~~~~~~~~~~~~~~---~~~-~--------~~~i~~t~ 75 (450)
T 1s6y_A 8 LKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVE---KAG-V--------PIEIHLTL 75 (450)
T ss_dssp EEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHH---HTT-C--------CCEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCCCCCCEEEEEEcCCChHHHHHHHHHHHHHHh---hcC-C--------CcEEEEeC
Confidence 59999999999 88888888874 56899999999 887774332221111 111 0 13577778
Q ss_pred Cc-cccCCCCEEEEcccCCh----------------------------------HHHHHHHHHHHhhCCCCeEEEecCCC
Q 004972 378 DY-SEFKDVDMVIEAVIESV----------------------------------PLKQKIFSELEKACPPHCILATNTST 422 (721)
Q Consensus 378 ~~-~~l~~aDlVIeavpe~~----------------------------------~~k~~v~~~l~~~~~~~~ii~s~ts~ 422 (721)
|+ +++++||+||.+++-.. .+..++.+++.+++ |+++++..|..
T Consensus 76 D~~eal~gAD~VVitagv~~~~~~~rd~~ip~~~g~~~~et~G~ggi~~~~rni~i~~~i~~~i~~~~-P~a~ii~~tNP 154 (450)
T 1s6y_A 76 DRRRALDGADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELC-PDAWLINFTNP 154 (450)
T ss_dssp CHHHHHTTCSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECSSS
T ss_pred CHHHHhCCCCEEEEcCCCCCCcchhhhhhhhhhcCcccccccccchHHHHhhhHHHHHHHHHHHHHHC-CCeEEEEeCCc
Confidence 87 78999999999998311 34667778888887 55666544443
Q ss_pred CCH-HHHhcccCCCCcEEEe
Q 004972 423 IDL-NIVGEKTSSQDRIIGA 441 (721)
Q Consensus 423 ~~i-~~l~~~~~~~~r~ig~ 441 (721)
..+ ++.........|++|+
T Consensus 155 vdivT~a~~k~~p~~rViG~ 174 (450)
T 1s6y_A 155 AGMVTEAVLRYTKQEKVVGL 174 (450)
T ss_dssp HHHHHHHHHHHCCCCCEEEC
T ss_pred HHHHHHHHHHhCCCCCEEEe
Confidence 332 3333223333466663
No 231
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=98.27 E-value=5.2e-07 Score=94.64 Aligned_cols=128 Identities=14% Similarity=0.101 Sum_probs=82.7
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cccCC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 384 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 384 (721)
++|||||+|.||.++|..+...|++|++||++++..+.. .......++ +.+++
T Consensus 141 ~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~--------------------------~~~~~~~~l~ell~~ 194 (324)
T 3hg7_A 141 RTLLILGTGSIGQHIAHTGKHFGMKVLGVSRSGRERAGF--------------------------DQVYQLPALNKMLAQ 194 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCCTTC--------------------------SEEECGGGHHHHHHT
T ss_pred ceEEEEEECHHHHHHHHHHHhCCCEEEEEcCChHHhhhh--------------------------hcccccCCHHHHHhh
Confidence 589999999999999999999999999999987431110 011112344 55789
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCC--HHHHhcccCC-CCcEEEecCC--------CCCCCCCee
Q 004972 385 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID--LNIVGEKTSS-QDRIIGAHFF--------SPAHVMPLL 453 (721)
Q Consensus 385 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~--i~~l~~~~~~-~~r~ig~h~~--------~p~~~~~lv 453 (721)
||+|+.++|-+.+...-+-.+....++++++|+..+.+-. ...+.+.+.. .-...++..| +|-+..+.|
T Consensus 195 aDvV~l~lPlt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~ga~lDV~~~EPl~~~~pL~~~~nv 274 (324)
T 3hg7_A 195 ADVIVSVLPATRETHHLFTASRFEHCKPGAILFNVGRGNAINEGDLLTALRTGKLGMAVLDVFEQEPLPADSPLWGQPNL 274 (324)
T ss_dssp CSEEEECCCCCSSSTTSBCTTTTTCSCTTCEEEECSCGGGBCHHHHHHHHHTTSSSEEEESCCSSSSCCTTCTTTTCTTE
T ss_pred CCEEEEeCCCCHHHHHHhHHHHHhcCCCCcEEEECCCchhhCHHHHHHHHHcCCceEEEeccCCCCCCCCCChhhcCCCE
Confidence 9999999996655443333455566889999875554433 3455555532 2233444433 233445667
Q ss_pred EEecCC
Q 004972 454 EIVRTE 459 (721)
Q Consensus 454 Eiv~~~ 459 (721)
-++|+-
T Consensus 275 ilTPHi 280 (324)
T 3hg7_A 275 IITPHN 280 (324)
T ss_dssp EECCSC
T ss_pred EEeCCC
Confidence 777753
No 232
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=98.26 E-value=3.4e-06 Score=88.67 Aligned_cols=121 Identities=21% Similarity=0.309 Sum_probs=76.2
Q ss_pred ceeEEEEcCCCCcHHHHHHHHHCCC--ceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCcccc
Q 004972 305 VRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF 382 (721)
Q Consensus 305 ~~kI~VIG~G~mG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l 382 (721)
.+||+|||+|.+|.+++..++..|+ +|+++|+++++++.....+.+.. .... .. -.+.. ++++++
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~-~~~~-~~----------~~v~~-~~~~a~ 72 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHAT-PYSP-TT----------VRVKA-GEYSDC 72 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHG-GGSS-SC----------CEEEE-CCGGGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhh-hhcC-CC----------eEEEe-CCHHHh
Confidence 4699999999999999999998885 89999999887764322222211 1110 00 12332 456889
Q ss_pred CCCCEEEEcccC--Ch------------HHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhccc----C-CCCcEEEe
Q 004972 383 KDVDMVIEAVIE--SV------------PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKT----S-SQDRIIGA 441 (721)
Q Consensus 383 ~~aDlVIeavpe--~~------------~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~~l~~~~----~-~~~r~ig~ 441 (721)
++||+||.+++- +. .+.+++.+++.+++ ++++++..| .|+..+...+ . .+.|++|+
T Consensus 73 ~~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~viv~t--NPv~~~t~~~~k~~~~p~~rviG~ 147 (317)
T 3d0o_A 73 HDADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASK-FDGIFLVAT--NPVDILAYATWKFSGLPKERVIGS 147 (317)
T ss_dssp TTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTT-CCSEEEECS--SSHHHHHHHHHHHHCCCGGGEEEC
T ss_pred CCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEEec--CcHHHHHHHHHHHhCCCHHHEEec
Confidence 999999999853 22 45566667777775 556555433 4444333322 2 33466653
No 233
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=98.26 E-value=5.6e-07 Score=94.18 Aligned_cols=128 Identities=13% Similarity=0.078 Sum_probs=82.3
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cccCC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 384 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 384 (721)
++|||||+|.||.++|..+...|++|++||++++..+.. .......++ +.+++
T Consensus 140 ~tvGIiG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~--------------------------~~~~~~~~l~ell~~ 193 (315)
T 3pp8_A 140 FSVGIMGAGVLGAKVAESLQAWGFPLRCWSRSRKSWPGV--------------------------ESYVGREELRAFLNQ 193 (315)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEEESSCCCCTTC--------------------------EEEESHHHHHHHHHT
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEEcCCchhhhhh--------------------------hhhcccCCHHHHHhh
Confidence 589999999999999999999999999999987532110 000111233 45789
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCC--CCHHHHhcccCCC-CcEEEecCCC--------CCCCCCee
Q 004972 385 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST--IDLNIVGEKTSSQ-DRIIGAHFFS--------PAHVMPLL 453 (721)
Q Consensus 385 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~--~~i~~l~~~~~~~-~r~ig~h~~~--------p~~~~~lv 453 (721)
||+|+.++|-..+...-+-++....++++++|+..+.+ +....+.+.+... -...++..|. |-+..+.|
T Consensus 194 aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~nv 273 (315)
T 3pp8_A 194 TRVLINLLPNTAQTVGIINSELLDQLPDGAYVLNLARGVHVQEADLLAALDSGKLKGAMLDVFSQEPLPQESPLWRHPRV 273 (315)
T ss_dssp CSEEEECCCCCGGGTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTCGGGGCTTE
T ss_pred CCEEEEecCCchhhhhhccHHHHhhCCCCCEEEECCCChhhhHHHHHHHHHhCCccEEEcCCCCCCCCCCCChhhcCCCE
Confidence 99999999977665444436667778999988754444 3334555554321 1222344332 22344556
Q ss_pred EEecCC
Q 004972 454 EIVRTE 459 (721)
Q Consensus 454 Eiv~~~ 459 (721)
-++|+-
T Consensus 274 ilTPHi 279 (315)
T 3pp8_A 274 AMTPHI 279 (315)
T ss_dssp EECSSC
T ss_pred EECCCC
Confidence 677753
No 234
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=98.25 E-value=1e-06 Score=92.44 Aligned_cols=102 Identities=20% Similarity=0.246 Sum_probs=69.5
Q ss_pred CceeEEEEcCCCCcHHHHHHHHHCCC--ceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCcee-ccCcc
Q 004972 304 GVRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG-VLDYS 380 (721)
Q Consensus 304 ~~~kI~VIG~G~mG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~-~~~~~ 380 (721)
..+||+|||+|.||.++|..++..|+ +|+++|+++++++.....+.+... .+..+.. +.+++
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~---------------~~~~~~i~~~~~~ 72 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALP---------------FTSPKKIYSAEYS 72 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGG---------------GSCCCEEEECCGG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhh---------------hcCCcEEEECcHH
Confidence 34699999999999999999999988 899999999887654332222110 0112332 44578
Q ss_pred ccCCCCEEEEcccC--------------ChHHHHHHHHHHHhhCCCCeEEEecCC
Q 004972 381 EFKDVDMVIEAVIE--------------SVPLKQKIFSELEKACPPHCILATNTS 421 (721)
Q Consensus 381 ~l~~aDlVIeavpe--------------~~~~k~~v~~~l~~~~~~~~ii~s~ts 421 (721)
++++||+||.+..- +..+.+++.+.+.++++ +++++..|.
T Consensus 73 a~~~aDiVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p-~a~ilvvtN 126 (326)
T 3vku_A 73 DAKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGF-NGIFLVAAN 126 (326)
T ss_dssp GGTTCSEEEECCCCC----------------CHHHHHHHHHTTTC-CSEEEECSS
T ss_pred HhcCCCEEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCC-ceEEEEccC
Confidence 89999999988631 33456667777888765 565554443
No 235
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=98.24 E-value=3.3e-07 Score=96.16 Aligned_cols=102 Identities=13% Similarity=0.109 Sum_probs=70.2
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cccCC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 384 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 384 (721)
++|+|||+|.||.++|..+...|++|++||++++... +. +.| +... ++ +.+++
T Consensus 143 ~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~-~~-----------~~g-------------~~~~-~l~ell~~ 196 (313)
T 2ekl_A 143 KTIGIVGFGRIGTKVGIIANAMGMKVLAYDILDIREK-AE-----------KIN-------------AKAV-SLEELLKN 196 (313)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSCCHHH-HH-----------HTT-------------CEEC-CHHHHHHH
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCcchhH-HH-----------hcC-------------ceec-CHHHHHhh
Confidence 5899999999999999999999999999999886532 11 111 1122 33 55788
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCH--HHHhcccC
Q 004972 385 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--NIVGEKTS 433 (721)
Q Consensus 385 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i--~~l~~~~~ 433 (721)
||+|+.++|.+.+...-+-++..+.+++++++++.+++-.+ ..+.+.+.
T Consensus 197 aDvVvl~~P~~~~t~~li~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~ 247 (313)
T 2ekl_A 197 SDVISLHVTVSKDAKPIIDYPQFELMKDNVIIVNTSRAVAVNGKALLDYIK 247 (313)
T ss_dssp CSEEEECCCCCTTSCCSBCHHHHHHSCTTEEEEESSCGGGBCHHHHHHHHH
T ss_pred CCEEEEeccCChHHHHhhCHHHHhcCCCCCEEEECCCCcccCHHHHHHHHH
Confidence 99999999966543222214455668899988865554333 34555553
No 236
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=98.24 E-value=4e-06 Score=90.41 Aligned_cols=132 Identities=14% Similarity=0.139 Sum_probs=82.4
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cccCC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 384 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 384 (721)
++|||||+|.||+.+|..+...|++|+.||+++... . .......++ +.+++
T Consensus 157 ktvGIIGlG~IG~~vA~~l~~~G~~V~~yd~~~~~~----------------~------------~~~~~~~sl~ell~~ 208 (416)
T 3k5p_A 157 KTLGIVGYGNIGSQVGNLAESLGMTVRYYDTSDKLQ----------------Y------------GNVKPAASLDELLKT 208 (416)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCCCC----------------B------------TTBEECSSHHHHHHH
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEECCcchhc----------------c------------cCcEecCCHHHHHhh
Confidence 589999999999999999999999999999874310 0 012223344 55789
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCC--CCHHHHhcccCCCC-cEEEecCC------------CCCCC
Q 004972 385 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST--IDLNIVGEKTSSQD-RIIGAHFF------------SPAHV 449 (721)
Q Consensus 385 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~--~~i~~l~~~~~~~~-r~ig~h~~------------~p~~~ 449 (721)
||+|+.++|...+.+.-+-++....++++++|+..+.+ +....+.+.+.... .-.++.-| +|-+.
T Consensus 209 aDvV~lhvPlt~~T~~li~~~~l~~mk~gailIN~aRG~vvd~~aL~~aL~~g~i~gAalDVf~~EP~~~~~~~~~pL~~ 288 (416)
T 3k5p_A 209 SDVVSLHVPSSKSTSKLITEAKLRKMKKGAFLINNARGSDVDLEALAKVLQEGHLAGAAIDVFPVEPASNGERFSTPLQG 288 (416)
T ss_dssp CSEEEECCCC-----CCBCHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHHTTSEEEEEECCCSSCCSSTTSCCCCTTTT
T ss_pred CCEEEEeCCCCHHHhhhcCHHHHhhCCCCcEEEECCCChhhhHHHHHHHHHcCCccEEEeCCCCCCCCCcccccchhHhc
Confidence 99999999976665443335566778999998765544 33445555553221 22333322 23344
Q ss_pred CCeeEEecCCC-CCHHH
Q 004972 450 MPLLEIVRTER-TSAQV 465 (721)
Q Consensus 450 ~~lvEiv~~~~-t~~e~ 465 (721)
.+.+-++|+-. .+.|+
T Consensus 289 ~~nvilTPHig~~T~ea 305 (416)
T 3k5p_A 289 LENVILTPHIGGSTEEA 305 (416)
T ss_dssp CTTEEECCSCTTCCHHH
T ss_pred CCCEEECCCCCCCCHHH
Confidence 55577888632 34443
No 237
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=98.21 E-value=1e-06 Score=93.02 Aligned_cols=101 Identities=9% Similarity=0.013 Sum_probs=70.8
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cccCC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 384 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 384 (721)
++|+|||.|.||.++|+.+...|++|++||++++.. .+. ..| +.. .++ +.+++
T Consensus 166 ~tvgIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~-~~~-----------~~g-------------~~~-~~l~ell~~ 219 (335)
T 2g76_A 166 KTLGILGLGRIGREVATRMQSFGMKTIGYDPIISPE-VSA-----------SFG-------------VQQ-LPLEEIWPL 219 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSCHH-HHH-----------HTT-------------CEE-CCHHHHGGG
T ss_pred CEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcchh-hhh-----------hcC-------------cee-CCHHHHHhc
Confidence 589999999999999999999999999999987642 111 111 111 233 55789
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHH--HHhccc
Q 004972 385 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKT 432 (721)
Q Consensus 385 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~--~l~~~~ 432 (721)
||+|+.++|.+.+...-+-++..+.++++++|+..+++-.+. .+.+.+
T Consensus 220 aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~vvd~~aL~~aL 269 (335)
T 2g76_A 220 CDFITVHTPLLPSTTGLLNDNTFAQCKKGVRVVNCARGGIVDEGALLRAL 269 (335)
T ss_dssp CSEEEECCCCCTTTTTSBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHH
T ss_pred CCEEEEecCCCHHHHHhhCHHHHhhCCCCcEEEECCCccccCHHHHHHHH
Confidence 999999999766544333255667789999987655553333 445544
No 238
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=98.21 E-value=1.1e-06 Score=92.27 Aligned_cols=119 Identities=23% Similarity=0.327 Sum_probs=72.2
Q ss_pred ceeEEEEcCCCCcHHHHHHHHHCCC--ceEEEeCCHHHHHHHHHHHHHHHHhhhhcCC-CCHHHHHHhhcCceeccCccc
Q 004972 305 VRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGK-LTQDKANNALKMLKGVLDYSE 381 (721)
Q Consensus 305 ~~kI~VIG~G~mG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~i~~~~~~~~ 381 (721)
.+||+|||+|.+|.+++..++..|+ +|+++|+++++++.....+ .... +. ..-++.. +++++
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl--------~~~~~~~------~~~~i~~-~~~~a 71 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDI--------NHGLPFM------GQMSLYA-GDYSD 71 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHH--------TTSCCCT------TCEEEC---CGGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHH--------HHhHHhc------CCeEEEE-CCHHH
Confidence 4689999999999999999999998 9999999987765321111 1110 00 0012332 45788
Q ss_pred cCCCCEEEEcccCCh--------------HHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhccc----C-CCCcEEEe
Q 004972 382 FKDVDMVIEAVIESV--------------PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKT----S-SQDRIIGA 441 (721)
Q Consensus 382 l~~aDlVIeavpe~~--------------~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~~l~~~~----~-~~~r~ig~ 441 (721)
+++||+||.+++... .+.+++.+++.+++ ++++++.. +.|+..+...+ . .+.|++|+
T Consensus 72 ~~~aDvVii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~viv~--tNPv~~~~~~~~k~s~~p~~rviG~ 147 (318)
T 1y6j_A 72 VKDCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYY-NHGVILVV--SNPVDIITYMIQKWSGLPVGKVIGS 147 (318)
T ss_dssp GTTCSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHHC-CSCEEEEC--SSSHHHHHHHHHHHHTCCTTTEEEC
T ss_pred hCCCCEEEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHhC-CCcEEEEe--cCcHHHHHHHHHHHcCCCHHHEecc
Confidence 999999999986322 23466777788885 55655543 34444333222 2 34567664
No 239
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=98.19 E-value=9.6e-07 Score=95.62 Aligned_cols=100 Identities=15% Similarity=0.169 Sum_probs=71.0
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cccCC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 384 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 384 (721)
++|||||.|.||+.+|..+...|++|+.||++++.. . +......++ +.+++
T Consensus 146 ktlGiIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~----------------~------------~~~~~~~~l~ell~~ 197 (404)
T 1sc6_A 146 KKLGIIGYGHIGTQLGILAESLGMYVYFYDIENKLP----------------L------------GNATQVQHLSDLLNM 197 (404)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCC----------------C------------TTCEECSCHHHHHHH
T ss_pred CEEEEEeECHHHHHHHHHHHHCCCEEEEEcCCchhc----------------c------------CCceecCCHHHHHhc
Confidence 589999999999999999999999999999975320 0 112223344 55789
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCH--HHHhcccC
Q 004972 385 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--NIVGEKTS 433 (721)
Q Consensus 385 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i--~~l~~~~~ 433 (721)
||+|+.++|...+.+.-+-++....++++++++..+.+-.+ ..+.+.+.
T Consensus 198 aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIN~aRg~~vd~~aL~~aL~ 248 (404)
T 1sc6_A 198 SDVVSLHVPENPSTKNMMGAKEISLMKPGSLLINASRGTVVDIPALADALA 248 (404)
T ss_dssp CSEEEECCCSSTTTTTCBCHHHHHHSCTTEEEEECSCSSSBCHHHHHHHHH
T ss_pred CCEEEEccCCChHHHHHhhHHHHhhcCCCeEEEECCCChHHhHHHHHHHHH
Confidence 99999999977665443335566778999998755544333 34555543
No 240
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=98.18 E-value=1.1e-06 Score=94.42 Aligned_cols=131 Identities=11% Similarity=-0.008 Sum_probs=82.4
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cccCC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 384 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 384 (721)
++|+|||+|.||.++|..+...|++|++||++++..+... +.| +....++ +.+++
T Consensus 192 ktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~~~~~~~~-----------~~G-------------~~~~~~l~ell~~ 247 (393)
T 2nac_A 192 MHVGTVAAGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEK-----------ELN-------------LTWHATREDMYPV 247 (393)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHH-----------HHT-------------CEECSSHHHHGGG
T ss_pred CEEEEEeECHHHHHHHHHHHhCCCEEEEEcCCccchhhHh-----------hcC-------------ceecCCHHHHHhc
Confidence 5899999999999999999999999999999864432211 001 2222334 55789
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCH--HHHhcccCCC-CcEEEecCCC--C------CCCCCee
Q 004972 385 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--NIVGEKTSSQ-DRIIGAHFFS--P------AHVMPLL 453 (721)
Q Consensus 385 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i--~~l~~~~~~~-~r~ig~h~~~--p------~~~~~lv 453 (721)
||+|+.++|-+.+...-+-++..+.++++++|++.+.+-.+ ..+.+.+... -.-.++..|. | -+..+.+
T Consensus 248 aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~gA~lDV~~~EP~~~~~pL~~~~nv 327 (393)
T 2nac_A 248 CDVVTLNCPLHPETEHMINDETLKLFKRGAYIVNTARGKLCDRDAVARALESGRLAGYAGDVWFPQPAPKDHPWRTMPYN 327 (393)
T ss_dssp CSEEEECSCCCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHTTSEEEEEESCCSSSSCCTTCGGGTSTTB
T ss_pred CCEEEEecCCchHHHHHhhHHHHhhCCCCCEEEECCCchHhhHHHHHHHHHcCCeeEEEEEecCCCCCCCCChhHcCCCE
Confidence 99999999966554322224566778999988765554333 3455555422 1223344432 2 2334456
Q ss_pred EEecCCC
Q 004972 454 EIVRTER 460 (721)
Q Consensus 454 Eiv~~~~ 460 (721)
-++|+-.
T Consensus 328 ilTPHia 334 (393)
T 2nac_A 328 GMTPHIS 334 (393)
T ss_dssp CCCCSCT
T ss_pred EECCCCC
Confidence 6777543
No 241
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=98.17 E-value=3.7e-06 Score=87.96 Aligned_cols=100 Identities=20% Similarity=0.250 Sum_probs=67.5
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCC--CceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCccccC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNN--IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 383 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G--~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~ 383 (721)
+||+|||+|.+|.+++..++..+ .+|+++|+++++++.....+.+... + ... -+++. +++++++
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~-~--~~~----------~~v~~-~~~~a~~ 66 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATP-F--AHP----------VWVWA-GSYGDLE 66 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGG-G--SCC----------CEEEE-CCGGGGT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHh-h--cCC----------eEEEE-CCHHHhC
Confidence 48999999999999999999987 4899999998877653222221100 0 000 12333 4578899
Q ss_pred CCCEEEEcccC--C------------hHHHHHHHHHHHhhCCCCeEEEecC
Q 004972 384 DVDMVIEAVIE--S------------VPLKQKIFSELEKACPPHCILATNT 420 (721)
Q Consensus 384 ~aDlVIeavpe--~------------~~~k~~v~~~l~~~~~~~~ii~s~t 420 (721)
+||+||.+++- + ..+.+++.+.+.++++ +++++..|
T Consensus 67 ~aD~Vii~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p-~a~iiv~t 116 (310)
T 2xxj_A 67 GARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAP-EAVLLVAT 116 (310)
T ss_dssp TEEEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCT-TCEEEECS
T ss_pred CCCEEEECCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHHCC-CcEEEEec
Confidence 99999998742 2 4456667777888864 55554433
No 242
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=98.16 E-value=2.3e-06 Score=89.79 Aligned_cols=73 Identities=21% Similarity=0.251 Sum_probs=57.9
Q ss_pred ChHHHHHHHHHHHHHHHHHHhhcCcCCChhHHHHHHHHccCCCCCCCcHhHHHHHhC--HHHHHHH----HHHHHHhhCC
Q 004972 616 TEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVG--ANYVYTS----LKKWSQLYGN 689 (721)
Q Consensus 616 ~~~~i~~r~~~~~~~ea~~~l~~gv~~~~~~iD~~~~~g~g~~~~~~Gp~~~~d~~G--~~~~~~~----~~~~~~~~~~ 689 (721)
.++++.||++.++++||++++++|++ ++++||.++..|+|+|..--|||+++|+.| +..+.+. ++.++..+|+
T Consensus 190 ~~Gfi~Nrll~a~~~EA~~l~~~g~~-~~~~id~a~~~g~g~~~a~~GP~~~~dl~g~g~~~~~~~~~~~~~~~~~~~~~ 268 (319)
T 2dpo_A 190 IDGFVLNRLQYAIISEAWRLVEEGIV-SPSDLDLVMSDGLGMRYAFIGPLETMHLNAEGMLSYSDRYSEGMKRVLKSFGS 268 (319)
T ss_dssp CTTTTHHHHHHHHHHHHHHHHHTTSS-CHHHHHHHHHTTHHHHHTTSCHHHHHHHTTTSHHHHHHHHHHHHHHHHHTCCC
T ss_pred cCCchHHHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHhCCCCCccccCHHHHHHhcCchHHHHHHHHhHHHHHHHHHcCC
Confidence 46789999999999999999999999 999999999999998722239999999995 4444332 2334555664
No 243
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=98.16 E-value=2.7e-06 Score=89.34 Aligned_cols=99 Identities=21% Similarity=0.205 Sum_probs=67.1
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCC--ceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCcee-ccCcccc
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG-VLDYSEF 382 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~-~~~~~~l 382 (721)
+||+|||+|.+|.+++..++..++ +|+++|+++++++.....+.+.. . ....++. .++++++
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~----~-----------~~~~~~v~~~~~~a~ 70 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQ----A-----------FTAPKKIYSGEYSDC 70 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGG----G-----------GSCCCEEEECCGGGG
T ss_pred CEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHH----H-----------hcCCeEEEECCHHHh
Confidence 589999999999999999998887 89999999988775332222111 0 0012222 2456889
Q ss_pred CCCCEEEEcccCC--h------------HHHHHHHHHHHhhCCCCeEEEecC
Q 004972 383 KDVDMVIEAVIES--V------------PLKQKIFSELEKACPPHCILATNT 420 (721)
Q Consensus 383 ~~aDlVIeavpe~--~------------~~k~~v~~~l~~~~~~~~ii~s~t 420 (721)
++||+||.+++-. . .+.+++.+.+.+++ ++++++..|
T Consensus 71 ~~aDvVii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~t 121 (318)
T 1ez4_A 71 KDADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSG-FDGIFLVAA 121 (318)
T ss_dssp TTCSEEEECCCC----------CHHHHHHHHHHHHHHHHHTT-CCSEEEECS
T ss_pred CCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEeC
Confidence 9999999998521 1 45566667777775 555555433
No 244
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=98.16 E-value=1.3e-06 Score=91.49 Aligned_cols=125 Identities=16% Similarity=0.107 Sum_probs=81.4
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cccCC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 384 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 384 (721)
++|+|||+|.||.++|..+...|++|++||++++..+ +. ..++ +.+++
T Consensus 145 ~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~------------------------------~~-~~~l~ell~~ 193 (311)
T 2cuk_A 145 LTLGLVGMGRIGQAVAKRALAFGMRVVYHARTPKPLP------------------------------YP-FLSLEELLKE 193 (311)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSSS------------------------------SC-BCCHHHHHHH
T ss_pred CEEEEEEECHHHHHHHHHHHHCCCEEEEECCCCcccc------------------------------cc-cCCHHHHHhh
Confidence 5899999999999999999999999999999875311 11 1233 45688
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCH--HHHhcccCCCCcEEEecCCC--C------CCCCCeeE
Q 004972 385 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--NIVGEKTSSQDRIIGAHFFS--P------AHVMPLLE 454 (721)
Q Consensus 385 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i--~~l~~~~~~~~r~ig~h~~~--p------~~~~~lvE 454 (721)
||+|+.++|.+.+...-+-++..+.++++++++..+++-.+ ..+.+.+...-.-.++..|. | -+..+.+-
T Consensus 194 aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~g~i~ga~lDv~~~eP~~~~~~L~~~~nvi 273 (311)
T 2cuk_A 194 ADVVSLHTPLTPETHRLLNRERLFAMKRGAILLNTARGALVDTEALVEALRGHLFGAGLDVTDPEPLPPGHPLYALPNAV 273 (311)
T ss_dssp CSEEEECCCCCTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHHHHHTTTSSEEEESSCSSSSCCTTSGGGGCTTEE
T ss_pred CCEEEEeCCCChHHHhhcCHHHHhhCCCCcEEEECCCCCccCHHHHHHHHhCcCCEEEEeeCCCCCCCCCChhhhCCCEE
Confidence 99999999976543332223455678899988765554333 34555555212224455543 2 23345566
Q ss_pred EecCCCC
Q 004972 455 IVRTERT 461 (721)
Q Consensus 455 iv~~~~t 461 (721)
++|+...
T Consensus 274 ltPh~~~ 280 (311)
T 2cuk_A 274 ITPHIGS 280 (311)
T ss_dssp ECCSCTT
T ss_pred ECCcCCC
Confidence 7776543
No 245
>3p2l_A ATP-dependent CLP protease proteolytic subunit; structural genomics, center for structural genomics of infec diseases, csgid; 2.29A {Francisella tularensis subsp} SCOP: c.14.1.1
Probab=98.16 E-value=3.6e-06 Score=81.83 Aligned_cols=138 Identities=21% Similarity=0.189 Sum_probs=96.6
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccCCCcccccchHHHHHHHHHHhhCCCcEEEEEC
Q 004972 27 ALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVE 106 (721)
Q Consensus 27 al~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~p~Iaav~ 106 (721)
.++..+.+.+...|..++.++..+.|+|.=. |.|+++. ....++ +.+...++|+++.+.
T Consensus 38 ~I~~~~a~~i~~~L~~l~~~~~~~~I~l~IN----SpGG~v~----------------~~~~I~-~~i~~~~~~v~t~~~ 96 (201)
T 3p2l_A 38 EVNDHSANLVIAQLLFLESEDPDKDIYFYIN----SPGGMVT----------------AGMGVY-DTMQFIKPDVSTICI 96 (201)
T ss_dssp CBCHHHHHHHHHHHHHHHHHCSSSCEEEEEE----ECCBCHH----------------HHHHHH-HHHHHSSSCEEEEEE
T ss_pred EECHHHHHHHHHHHHHHHhcCCCCCEEEEEE----CCCCCHH----------------HHHHHH-HHHHHhCCCeEEEEc
Confidence 4888999999999999987666666666321 2233321 122444 667889999999999
Q ss_pred CcccccchHhhhhcCE--EEeeCCceEeCcccccCcccc--c-----------------cccccc--cCHHHHHHHHHcC
Q 004972 107 GLALGGGLELAMGCHA--RIAAPKTQLGLPELTLGVIPG--T-----------------QRLPRL--VGLSKAIEMMLLS 163 (721)
Q Consensus 107 G~a~GgG~~lalacD~--ria~~~a~~~~pe~~~Gl~P~--~-----------------~~l~r~--~G~~~a~~l~ltg 163 (721)
|.|.++|.-++++||. |++.+++.+.+....-| .-| + ..+.+. .......+++-..
T Consensus 97 G~AaS~g~~i~~ag~~g~r~~~p~a~imiH~p~~~-~~G~a~di~~~a~~l~~~~~~~~~~ya~~tG~~~e~i~~~~~~~ 175 (201)
T 3p2l_A 97 GLAASMGSLLLAGGAKGKRYSLPSSQIMIHQPLGG-FRGQASDIEIHAKNILRIKDRLNKVLAHHTGQDLETIVKDTDRD 175 (201)
T ss_dssp EEEETHHHHHHHTSSTTCEEECTTCEEEECCCEEE-EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTSSC
T ss_pred CEehhHHHHHHHcCccCCEEEcCCCeEEEeccccc-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHhhcC
Confidence 9999999999999998 99999999988766432 222 0 001111 2334444555555
Q ss_pred CCcCHHHHHHcCCccEEcCC-chH
Q 004972 164 KSITSEEGWKLGLIDAVVTS-EEL 186 (721)
Q Consensus 164 ~~~~a~eA~~~Glv~~vv~~-~~l 186 (721)
..++|+||+++||||+|++. +++
T Consensus 176 ~~lta~EA~e~GliD~I~~~~~~l 199 (201)
T 3p2l_A 176 NFMMADEAKAYGLIDHVIESREAI 199 (201)
T ss_dssp EEEEHHHHHHHTSCSEECCCSCC-
T ss_pred eeecHHHHHHcCCccEecCCHHHh
Confidence 66899999999999999854 444
No 246
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=98.16 E-value=3.4e-06 Score=89.76 Aligned_cols=137 Identities=8% Similarity=0.049 Sum_probs=85.7
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cccCC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 384 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 384 (721)
++|||||.|.||.++|..+...|++|+.||++... +.+ ...| +.. .++ +.+++
T Consensus 177 ktvGIIGlG~IG~~vA~~l~~fG~~V~~~d~~~~~-~~~-----------~~~g-------------~~~-~~l~ell~~ 230 (365)
T 4hy3_A 177 SEIGIVGFGDLGKALRRVLSGFRARIRVFDPWLPR-SML-----------EENG-------------VEP-ASLEDVLTK 230 (365)
T ss_dssp SEEEEECCSHHHHHHHHHHTTSCCEEEEECSSSCH-HHH-----------HHTT-------------CEE-CCHHHHHHS
T ss_pred CEEEEecCCcccHHHHHhhhhCCCEEEEECCCCCH-HHH-----------hhcC-------------eee-CCHHHHHhc
Confidence 58999999999999999999999999999998532 111 0111 222 234 56789
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCC--CCHHHHhcccCCCCcEEEecCCC--C------CCCCCeeE
Q 004972 385 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST--IDLNIVGEKTSSQDRIIGAHFFS--P------AHVMPLLE 454 (721)
Q Consensus 385 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~--~~i~~l~~~~~~~~r~ig~h~~~--p------~~~~~lvE 454 (721)
||+|+.++|-+.+...-+-.+....++++++|+..+.+ +.-..+.+.+....-..++.-|. | -+..+.|-
T Consensus 231 aDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~aaLDV~~~EPl~~~~pL~~~~nvi 310 (365)
T 4hy3_A 231 SDFIFVVAAVTSENKRFLGAEAFSSMRRGAAFILLSRADVVDFDALMAAVSSGHIVAASDVYPEEPLPLDHPVRSLKGFI 310 (365)
T ss_dssp CSEEEECSCSSCC---CCCHHHHHTSCTTCEEEECSCGGGSCHHHHHHHHHTTSSEEEESCCSSSSCCTTCGGGTCTTEE
T ss_pred CCEEEEcCcCCHHHHhhcCHHHHhcCCCCcEEEECcCCchhCHHHHHHHHHcCCceEEeeCCCCCCCCCCChhhcCCCEE
Confidence 99999999977665544446677778999998754443 33345555554322114444332 2 23445577
Q ss_pred EecCCC-CCHHHHHH
Q 004972 455 IVRTER-TSAQVILD 468 (721)
Q Consensus 455 iv~~~~-t~~e~~~~ 468 (721)
++|+-. .+.++.+.
T Consensus 311 lTPHia~~t~e~~~~ 325 (365)
T 4hy3_A 311 RSAHRAGALDSAFKK 325 (365)
T ss_dssp ECCSCSSCCHHHHHH
T ss_pred ECCccccCHHHHHHH
Confidence 777543 24444433
No 247
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=98.15 E-value=3e-06 Score=89.22 Aligned_cols=100 Identities=19% Similarity=0.226 Sum_probs=67.7
Q ss_pred ceeEEEEcCCCCcHHHHHHHHHCCC--ceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCcee-ccCccc
Q 004972 305 VRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG-VLDYSE 381 (721)
Q Consensus 305 ~~kI~VIG~G~mG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~-~~~~~~ 381 (721)
.+||+|||+|.+|.+++..++..++ +|+++|+++++++.....+.+.. . ....+.. .+++++
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~----~-----------~~~~~~i~~~~~~a 73 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNAL----P-----------FTSPKKIYSAEYSD 73 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTG----G-----------GSCCCEEEECCGGG
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHH----H-----------hcCCeEEEECCHHH
Confidence 3699999999999999999998886 89999999988765332222111 0 0112222 245688
Q ss_pred cCCCCEEEEcccCC--h------------HHHHHHHHHHHhhCCCCeEEEecC
Q 004972 382 FKDVDMVIEAVIES--V------------PLKQKIFSELEKACPPHCILATNT 420 (721)
Q Consensus 382 l~~aDlVIeavpe~--~------------~~k~~v~~~l~~~~~~~~ii~s~t 420 (721)
+++||+||.+++-. . .+.+++.+.+.+++ ++++++..|
T Consensus 74 ~~~aDvVii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~t 125 (326)
T 2zqz_A 74 AKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSG-FNGIFLVAA 125 (326)
T ss_dssp GGGCSEEEECCCCC-----CHHHHHHHHHHHHHHHHHHHHHHT-CCSEEEECS
T ss_pred hCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEeC
Confidence 99999999998522 1 45566667777886 555554433
No 248
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=98.12 E-value=2e-06 Score=91.20 Aligned_cols=102 Identities=14% Similarity=0.021 Sum_probs=69.6
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cccCC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 384 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 384 (721)
++|+|||+|.||..+|..+...|++|++||++++.... . ..| +....++ +.+++
T Consensus 169 ~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~-~-----------~~g-------------~~~~~~l~ell~~ 223 (347)
T 1mx3_A 169 ETLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSDGVE-R-----------ALG-------------LQRVSTLQDLLFH 223 (347)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCTTHH-H-----------HHT-------------CEECSSHHHHHHH
T ss_pred CEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcchhhH-h-----------hcC-------------CeecCCHHHHHhc
Confidence 58999999999999999999999999999987643110 0 001 1222344 55788
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCC--HHHHhccc
Q 004972 385 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID--LNIVGEKT 432 (721)
Q Consensus 385 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~--i~~l~~~~ 432 (721)
||+|+.++|.+.+...-+-++..+.++++++|+..+++-. ...+.+.+
T Consensus 224 aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~~vd~~aL~~aL 273 (347)
T 1mx3_A 224 SDCVTLHCGLNEHNHHLINDFTVKQMRQGAFLVNTARGGLVDEKALAQAL 273 (347)
T ss_dssp CSEEEECCCCCTTCTTSBSHHHHTTSCTTEEEEECSCTTSBCHHHHHHHH
T ss_pred CCEEEEcCCCCHHHHHHhHHHHHhcCCCCCEEEECCCChHHhHHHHHHHH
Confidence 9999999996655433332555667899998886555433 34455544
No 249
>1tg6_A Putative ATP-dependent CLP protease proteolytic S; mitochondrial CLPP, CLP/HSP 100, ATP-dependent protease, HYD; HET: FME; 2.10A {Homo sapiens} SCOP: c.14.1.1
Probab=98.11 E-value=5.2e-06 Score=84.18 Aligned_cols=135 Identities=17% Similarity=0.186 Sum_probs=95.5
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccCCCcccccchHHHHHHHHHHhhCCCcEEEEEC
Q 004972 27 ALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVE 106 (721)
Q Consensus 27 al~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~p~Iaav~ 106 (721)
.++.++.+.+...|..++.++..+.|+|.=. |.|+++. ....++ +.|...++||++.+.
T Consensus 90 ~I~d~~a~~iiaqL~~l~~ed~~k~I~L~IN----SPGGsV~----------------ag~aIy-d~I~~~k~pV~t~v~ 148 (277)
T 1tg6_A 90 PIDDSVASLVIAQLLFLQSESNKKPIHMYIN----SPGGVVT----------------AGLAIY-DTMQYILNPICTWCV 148 (277)
T ss_dssp SBCHHHHHHHHHHHHHHHHHCSSSCEEEEEE----ECCBCHH----------------HHHHHH-HHHHHSCSCEEEEEE
T ss_pred EECHHHHHHHHHHHHHHHhcCCCCCEEEEEE----CCCCCHH----------------HHHHHH-HHHHhcCCCEEEEEc
Confidence 3788899999999998876555677776421 2223221 122445 567888999999999
Q ss_pred CcccccchHhhhhcCE--EEeeCCceEeCcccccCcccc--cc-----------------ccccc--cCHHHHHHHHHcC
Q 004972 107 GLALGGGLELAMGCHA--RIAAPKTQLGLPELTLGVIPG--TQ-----------------RLPRL--VGLSKAIEMMLLS 163 (721)
Q Consensus 107 G~a~GgG~~lalacD~--ria~~~a~~~~pe~~~Gl~P~--~~-----------------~l~r~--~G~~~a~~l~ltg 163 (721)
|.|..+|.-++++||. |++.+++.++.....-|. -| +. .+.+. .......+++-.+
T Consensus 149 G~AASaG~~Ia~Agd~gkr~a~P~S~ImihqP~~g~-~G~a~Di~~~a~ei~~~~~~~~~i~a~~tG~~~e~i~~~~drd 227 (277)
T 1tg6_A 149 GQAASMGSLLLAAGTPGMRHSLPNSRIMIHQPSGGA-RGQATDIAIQAEEIMKLKKQLYNIYAKHTKQSLQVIESAMERD 227 (277)
T ss_dssp EEEETHHHHHHHTSCTTCEEECTTCEEEECCCCCCC-CSSHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHSSC
T ss_pred cEeHHHHHHHHHCCCcCCEEEecCCEEEEecccccc-cCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhcC
Confidence 9999999999999999 999999999987654332 22 00 01111 2234455555556
Q ss_pred CCcCHHHHHHcCCccEEcCC
Q 004972 164 KSITSEEGWKLGLIDAVVTS 183 (721)
Q Consensus 164 ~~~~a~eA~~~Glv~~vv~~ 183 (721)
..++|+||+++||||+|...
T Consensus 228 ~~lta~EAle~GLID~I~~~ 247 (277)
T 1tg6_A 228 RYMSPMEAQEFGILDKVLVH 247 (277)
T ss_dssp EEECHHHHHHHTSCSEECSS
T ss_pred cccCHHHHHHCCCCCEecCc
Confidence 77899999999999999854
No 250
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=98.08 E-value=1.3e-06 Score=92.29 Aligned_cols=101 Identities=19% Similarity=0.148 Sum_probs=72.5
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cccCC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 384 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 384 (721)
++|||||.|.||.++|..+...|++|++||++++.... +.| +... ++ +.+++
T Consensus 142 ~tvgIiG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~-------------~~g-------------~~~~-~l~ell~~ 194 (334)
T 2pi1_A 142 LTLGVIGTGRIGSRVAMYGLAFGMKVLCYDVVKREDLK-------------EKG-------------CVYT-SLDELLKE 194 (334)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHHHH-------------HTT-------------CEEC-CHHHHHHH
T ss_pred ceEEEECcCHHHHHHHHHHHHCcCEEEEECCCcchhhH-------------hcC-------------ceec-CHHHHHhh
Confidence 58999999999999999999999999999998765321 011 1222 24 55789
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCC--CCHHHHhcccC
Q 004972 385 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST--IDLNIVGEKTS 433 (721)
Q Consensus 385 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~--~~i~~l~~~~~ 433 (721)
||+|+.++|-+.+...-+-++..+.++++++|+..+.+ +....+.+.+.
T Consensus 195 aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~ 245 (334)
T 2pi1_A 195 SDVISLHVPYTKETHHMINEERISLMKDGVYLINTARGKVVDTDALYRAYQ 245 (334)
T ss_dssp CSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred CCEEEEeCCCChHHHHhhCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHH
Confidence 99999999976665544445667778999998754444 33345555553
No 251
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=98.08 E-value=2e-06 Score=90.97 Aligned_cols=111 Identities=17% Similarity=0.117 Sum_probs=75.4
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cccCC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 384 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 384 (721)
++|||||.|.||.++|..+...|++|+.||++++.. .+. ..... ++ +.+++
T Consensus 149 ktvgIiGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~--------------~~~-------------~~~~~-~l~ell~~ 200 (343)
T 2yq5_A 149 LTVGLIGVGHIGSAVAEIFSAMGAKVIAYDVAYNPE--------------FEP-------------FLTYT-DFDTVLKE 200 (343)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCGG--------------GTT-------------TCEEC-CHHHHHHH
T ss_pred CeEEEEecCHHHHHHHHHHhhCCCEEEEECCChhhh--------------hhc-------------ccccc-CHHHHHhc
Confidence 589999999999999999999999999999987530 010 12222 44 55789
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCC--CCHHHHhcccC-CCCcEEEecCC
Q 004972 385 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST--IDLNIVGEKTS-SQDRIIGAHFF 444 (721)
Q Consensus 385 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~--~~i~~l~~~~~-~~~r~ig~h~~ 444 (721)
||+|+.++|-+.+...-+-.+....++++++|+..+.+ +....+.+.+. ..-...++.-|
T Consensus 201 aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~LDV~ 263 (343)
T 2yq5_A 201 ADIVSLHTPLFPSTENMIGEKQLKEMKKSAYLINCARGELVDTGALIKALQDGEIAGAGLDTL 263 (343)
T ss_dssp CSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSCEEESCC
T ss_pred CCEEEEcCCCCHHHHHHhhHHHHhhCCCCcEEEECCCChhhhHHHHHHHHHcCCCcEEEeccc
Confidence 99999999966655444445566778999998755444 33345555543 22233455443
No 252
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=98.05 E-value=3.4e-05 Score=70.06 Aligned_cols=97 Identities=19% Similarity=0.186 Sum_probs=61.2
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCC-CHHHHHHhhcCceeccCccccCC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL-TQDKANNALKMLKGVLDYSEFKD 384 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~i~~~~~~~~l~~ 384 (721)
++|.|+|+|.||..++..|.+.|++|+++|++++.++..... .....-.+.. +.... ....+.+
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~----~~~~~~~~d~~~~~~l-----------~~~~~~~ 69 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE----IDALVINGDCTKIKTL-----------EDAGIED 69 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----CSSEEEESCTTSHHHH-----------HHTTTTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHh----cCcEEEEcCCCCHHHH-----------HHcCccc
Confidence 489999999999999999999999999999999876654210 0000000100 00000 0023678
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEec
Q 004972 385 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATN 419 (721)
Q Consensus 385 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ 419 (721)
+|+||.|+|.+ . ....+.++.+.++++.+++..
T Consensus 70 ~d~vi~~~~~~-~-~~~~~~~~~~~~~~~~ii~~~ 102 (140)
T 1lss_A 70 ADMYIAVTGKE-E-VNLMSSLLAKSYGINKTIARI 102 (140)
T ss_dssp CSEEEECCSCH-H-HHHHHHHHHHHTTCCCEEEEC
T ss_pred CCEEEEeeCCc-h-HHHHHHHHHHHcCCCEEEEEe
Confidence 99999999853 2 223344455556766776643
No 253
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=98.04 E-value=2.3e-06 Score=90.18 Aligned_cols=102 Identities=17% Similarity=0.123 Sum_probs=72.0
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cccCC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 384 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 384 (721)
++|||||.|.||.++|..+...|++|++||+++...+.... . .+... ++ +.+++
T Consensus 146 ~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~-----------~-------------g~~~~-~l~ell~~ 200 (330)
T 4e5n_A 146 ATVGFLGMGAIGLAMADRLQGWGATLQYHEAKALDTQTEQR-----------L-------------GLRQV-ACSELFAS 200 (330)
T ss_dssp CEEEEECCSHHHHHHHHHTTTSCCEEEEECSSCCCHHHHHH-----------H-------------TEEEC-CHHHHHHH
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCCCcHhHHHh-----------c-------------CceeC-CHHHHHhh
Confidence 68999999999999999999999999999998733222110 0 12222 34 55788
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCC--CCHHHHhccc
Q 004972 385 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST--IDLNIVGEKT 432 (721)
Q Consensus 385 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~--~~i~~l~~~~ 432 (721)
||+|+.++|-+.+...-+-++..+.++++++|+..+.+ +....+.+.+
T Consensus 201 aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~~vd~~aL~~aL 250 (330)
T 4e5n_A 201 SDFILLALPLNADTLHLVNAELLALVRPGALLVNPCRGSVVDEAAVLAAL 250 (330)
T ss_dssp CSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCGGGBCHHHHHHHH
T ss_pred CCEEEEcCCCCHHHHHHhCHHHHhhCCCCcEEEECCCCchhCHHHHHHHH
Confidence 99999999966665544445677788999998765544 3334555544
No 254
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=98.03 E-value=5.2e-06 Score=87.07 Aligned_cols=89 Identities=11% Similarity=0.119 Sum_probs=64.3
Q ss_pred eeEEEEcCCCCcHHHHHHHHHC-CC-ceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-ccc
Q 004972 306 RKVAVIGGGLMGSGIATAHILN-NI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 382 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~-G~-~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l 382 (721)
++|+|||+|.||..++..+++. |+ +|++||+++++++...+.+ + ..+...+++ +.+
T Consensus 136 ~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr~~~~~~~l~~~~----------~-----------~~~~~~~~~~e~v 194 (312)
T 2i99_A 136 EVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADTV----------Q-----------GEVRVCSSVQEAV 194 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCCCSEEEEECSSHHHHHHHHHHS----------S-----------SCCEECSSHHHHH
T ss_pred cEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHh----------h-----------CCeEEeCCHHHHH
Confidence 5899999999999999999876 76 8999999999877643210 1 013445555 567
Q ss_pred CCCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCC
Q 004972 383 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 421 (721)
Q Consensus 383 ~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts 421 (721)
++||+||.|+|.. ..++.. +.++++++|++.++
T Consensus 195 ~~aDiVi~atp~~----~~v~~~--~~l~~g~~vi~~g~ 227 (312)
T 2i99_A 195 AGADVIITVTLAT----EPILFG--EWVKPGAHINAVGA 227 (312)
T ss_dssp TTCSEEEECCCCS----SCCBCG--GGSCTTCEEEECCC
T ss_pred hcCCEEEEEeCCC----CcccCH--HHcCCCcEEEeCCC
Confidence 8999999999953 233322 46788888876543
No 255
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=98.03 E-value=3.3e-05 Score=70.60 Aligned_cols=105 Identities=13% Similarity=0.029 Sum_probs=65.4
Q ss_pred ceeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCC-HHHHHHhhcCceeccCccccC
Q 004972 305 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT-QDKANNALKMLKGVLDYSEFK 383 (721)
Q Consensus 305 ~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~i~~~~~~~~l~ 383 (721)
+++|.|+|+|.+|..+|..|.+.|++|+++|++++.++.+.+. ....-.+-.+ ++... ...+.
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~-----~~~~~~gd~~~~~~l~-----------~~~~~ 69 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDE-----GFDAVIADPTDESFYR-----------SLDLE 69 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT-----TCEEEECCTTCHHHHH-----------HSCCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHC-----CCcEEECCCCCHHHHH-----------hCCcc
Confidence 5689999999999999999999999999999999987765320 0000011111 00000 01257
Q ss_pred CCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHH
Q 004972 384 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 427 (721)
Q Consensus 384 ~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~~ 427 (721)
++|+||.+++ +.+....+...+...- ...+++...+......
T Consensus 70 ~~d~vi~~~~-~~~~n~~~~~~a~~~~-~~~iia~~~~~~~~~~ 111 (141)
T 3llv_A 70 GVSAVLITGS-DDEFNLKILKALRSVS-DVYAIVRVSSPKKKEE 111 (141)
T ss_dssp TCSEEEECCS-CHHHHHHHHHHHHHHC-CCCEEEEESCGGGHHH
T ss_pred cCCEEEEecC-CHHHHHHHHHHHHHhC-CceEEEEEcChhHHHH
Confidence 8999999998 4444444444444444 5556665554443333
No 256
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=98.00 E-value=2.1e-06 Score=91.84 Aligned_cols=104 Identities=15% Similarity=0.065 Sum_probs=71.6
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCc-eEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cccC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIY-VVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 383 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~-V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~ 383 (721)
++|+|||+|.||..+|..+...|++ |++||+++...+... +.| +....++ +.++
T Consensus 165 ~tvgIIG~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~-----------~~g-------------~~~~~~l~ell~ 220 (364)
T 2j6i_A 165 KTIATIGAGRIGYRVLERLVPFNPKELLYYDYQALPKDAEE-----------KVG-------------ARRVENIEELVA 220 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHH-----------HTT-------------EEECSSHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCcEEEEECCCccchhHHH-----------hcC-------------cEecCCHHHHHh
Confidence 5899999999999999999999997 999999875433211 111 2223344 5578
Q ss_pred CCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCC--CCHHHHhcccC
Q 004972 384 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST--IDLNIVGEKTS 433 (721)
Q Consensus 384 ~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~--~~i~~l~~~~~ 433 (721)
+||+|+.++|.+.+...-+-++..+.++++++|++.+.+ +....+.+.+.
T Consensus 221 ~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIn~arG~~vd~~aL~~aL~ 272 (364)
T 2j6i_A 221 QADIVTVNAPLHAGTKGLINKELLSKFKKGAWLVNTARGAICVAEDVAAALE 272 (364)
T ss_dssp TCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred cCCEEEECCCCChHHHHHhCHHHHhhCCCCCEEEECCCCchhCHHHHHHHHH
Confidence 999999999976554433334566778999988765554 23345555543
No 257
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=97.97 E-value=3.3e-06 Score=89.32 Aligned_cols=101 Identities=14% Similarity=0.037 Sum_probs=70.3
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cccCC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 384 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 384 (721)
++|+|||+|.||.++|..+...|++|++||++++.. . . .. +...+++ +.+++
T Consensus 147 ~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~-~-------~~-----------------~~~~~~l~ell~~ 199 (333)
T 1j4a_A 147 QVVGVVGTGHIGQVFMQIMEGFGAKVITYDIFRNPE--L-E-------KK-----------------GYYVDSLDDLYKQ 199 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHH--H-H-------HT-----------------TCBCSCHHHHHHH
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcchh--H-H-------hh-----------------CeecCCHHHHHhh
Confidence 589999999999999999999999999999987652 1 0 00 1112233 45688
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCC--CCHHHHhcccC
Q 004972 385 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST--IDLNIVGEKTS 433 (721)
Q Consensus 385 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~--~~i~~l~~~~~ 433 (721)
||+|+.++|.+.+...-+-++..+.+++++++++.+.+ +....+.+.+.
T Consensus 200 aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~ 250 (333)
T 1j4a_A 200 ADVISLHVPDVPANVHMINDESIAKMKQDVVIVNVSRGPLVDTDAVIRGLD 250 (333)
T ss_dssp CSEEEECSCCCGGGTTCBSHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred CCEEEEcCCCcHHHHHHHhHHHHhhCCCCcEEEECCCCcccCHHHHHHHHH
Confidence 99999999976654432224455678899988765554 33345555543
No 258
>1pix_A Glutaconyl-COA decarboxylase A subunit; biotin-dependent ION pump, carboxyltransferase, lyase; 2.20A {Acidaminococcus fermentans} SCOP: c.14.1.4 c.14.1.4
Probab=97.85 E-value=8.8e-05 Score=83.22 Aligned_cols=170 Identities=15% Similarity=0.059 Sum_probs=110.2
Q ss_pred EEEEEeCCC-CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccCCCcccccchHHHHHHHHH
Q 004972 15 VAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNL 93 (721)
Q Consensus 15 v~~i~l~~p-~~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (721)
|+++..+.. ..-++.+...+.+..+++.+.+.. +-+|.|.- |.|+.+.+-...... ...+...+.+ + ..
T Consensus 107 v~v~a~D~t~~gGs~g~~~~~Ki~r~~e~A~~~~-lPvI~l~d-----SgGArlqe~~~~l~~--~~~~g~i~~~-~-~~ 176 (587)
T 1pix_A 107 CVVVASDNKKLAGAWVPGQAECLLRASDTAKTLH-VPLVYVLN-----CSGVKFDEQEKVYPN--RRGGGTPFFR-N-AE 176 (587)
T ss_dssp EEEEEECTTTTTTEECTTHHHHHHHHHHHHHHHT-CCEEEEEC-----CCEECGGGHHHHSSS--TTSTTHHHHH-H-HH
T ss_pred EEEEEECCccccCCCCHHHHHHHHHHHHHHHHcC-CCEEEEEe-----CCCCCccccchhccc--cccHHHHHHH-H-HH
Confidence 344444443 246788888899999998887653 44566654 456666543221110 0112222222 3 33
Q ss_pred HhhCCCcEEEEECCcccccchHhhhhcCEEEeeC-CceEeCcccccCccccccccccccCHHHHHHHH-HcCCCcCHHH-
Q 004972 94 IEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-KTQLGLPELTLGVIPGTQRLPRLVGLSKAIEMM-LLSKSITSEE- 170 (721)
Q Consensus 94 l~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~-~a~~~~pe~~~Gl~P~~~~l~r~~G~~~a~~l~-ltg~~~~a~e- 170 (721)
+.....|+|++|.|.|.|||... ..||++|+++ ++.+++.-.. ++- ...---.++..+|.+++ .+|+.+++++
T Consensus 177 ls~~giP~Isvv~G~~~GGga~~-a~~d~vim~e~~a~i~~~GP~--vi~-~~~~~~~~d~~~A~el~~~tge~v~~e~l 252 (587)
T 1pix_A 177 LNQLGIPVIVGIYGTNPAGGGYH-SISPTVIIAHEKANMAVGGAG--IMG-GMNPKGHVDLEYANEIADMVDRTGKTEPP 252 (587)
T ss_dssp HHHTTCCEEEEECSEEETHHHHH-HHSSSEEEEETTCEEESCCCT--TCC-SCCSSSSCCHHHHHHHHHHHHTTCCCCCS
T ss_pred HhCCCCCEEEEEecCCcHHHHHH-HhcCceEEecCCcEEEecCHH--HHh-hhccccccchhHHHHHHHHhCCccChhhc
Confidence 67889999999999999999999 9999999986 4888873211 010 11111237999999999 9999988665
Q ss_pred ------HHHcCCccEEcCCchHHHHHHHHHHHHHhcC
Q 004972 171 ------GWKLGLIDAVVTSEELLKVSRLWALDIAARR 201 (721)
Q Consensus 171 ------A~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~ 201 (721)
+.+.|++|.+++.++ ++.+.++++.+.-
T Consensus 253 gga~~h~~~~GvvD~vv~~e~---~a~~~~r~~ls~l 286 (587)
T 1pix_A 253 GAVDIHYTETGFMREVYASEE---GVLEGIKKYVGML 286 (587)
T ss_dssp SBHHHHTTTSCCSCEEESSHH---HHHHHHHHHHHTS
T ss_pred ccHHHHHhhcCceeEecCCHH---HHHHHHHHHHHhC
Confidence 236899999998765 4555555555543
No 259
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=97.83 E-value=2.7e-06 Score=90.66 Aligned_cols=111 Identities=14% Similarity=0.074 Sum_probs=74.1
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cccCC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 384 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 384 (721)
++|||||.|.||+++|..+...|++|++||++.+.. ..+ .. ..++ +.+++
T Consensus 120 ktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~~~~---------------~~~-------------~~-~~sl~ell~~ 170 (381)
T 3oet_A 120 RTIGIVGVGNVGSRLQTRLEALGIRTLLCDPPRAAR---------------GDE-------------GD-FRTLDELVQE 170 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECHHHHHT---------------TCC-------------SC-BCCHHHHHHH
T ss_pred CEEEEEeECHHHHHHHHHHHHCCCEEEEECCChHHh---------------ccC-------------cc-cCCHHHHHhh
Confidence 589999999999999999999999999999744321 000 11 2334 55789
Q ss_pred CCEEEEcccCChH----HHHHHHHHHHhhCCCCeEEEecCCC--CCHHHHhcccCC-CCcEEEecCCC
Q 004972 385 VDMVIEAVIESVP----LKQKIFSELEKACPPHCILATNTST--IDLNIVGEKTSS-QDRIIGAHFFS 445 (721)
Q Consensus 385 aDlVIeavpe~~~----~k~~v~~~l~~~~~~~~ii~s~ts~--~~i~~l~~~~~~-~~r~ig~h~~~ 445 (721)
||+|+.++|-..+ ...-+-.+....++++++|+..+.+ +.-..+.+.+.. .-...++..|.
T Consensus 171 aDiV~l~~Plt~~g~~~T~~li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g~i~gA~LDV~e 238 (381)
T 3oet_A 171 ADVLTFHTPLYKDGPYKTLHLADETLIRRLKPGAILINACRGPVVDNAALLARLNAGQPLSVVLDVWE 238 (381)
T ss_dssp CSEEEECCCCCCSSTTCCTTSBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCCEEEEESCCT
T ss_pred CCEEEEcCcCCccccccchhhcCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhCCCeEEEeeccc
Confidence 9999999996655 3333334556678999998754444 333455555542 33445566554
No 260
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=97.83 E-value=6.5e-06 Score=75.87 Aligned_cols=69 Identities=20% Similarity=0.195 Sum_probs=52.3
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cccCC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 384 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 384 (721)
++|+|||+|.||..++..|...|++|+++|+++++++...+.+ + ..+...++. +.+++
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~----------~-----------~~~~~~~~~~~~~~~ 80 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKY----------E-----------YEYVLINDIDSLIKN 80 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHH----------T-----------CEEEECSCHHHHHHT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHh----------C-----------CceEeecCHHHHhcC
Confidence 5899999999999999999999999999999999876542211 0 012223344 55688
Q ss_pred CCEEEEcccCC
Q 004972 385 VDMVIEAVIES 395 (721)
Q Consensus 385 aDlVIeavpe~ 395 (721)
+|+||.|+|..
T Consensus 81 ~Divi~at~~~ 91 (144)
T 3oj0_A 81 NDVIITATSSK 91 (144)
T ss_dssp CSEEEECSCCS
T ss_pred CCEEEEeCCCC
Confidence 99999999854
No 261
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=97.83 E-value=5e-05 Score=66.62 Aligned_cols=98 Identities=17% Similarity=0.111 Sum_probs=60.9
Q ss_pred ceeEEEEcCCCCcHHHHHHHHHCC-CceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-ccc
Q 004972 305 VRKVAVIGGGLMGSGIATAHILNN-IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 382 (721)
Q Consensus 305 ~~kI~VIG~G~mG~~iA~~la~~G-~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l 382 (721)
+++|.|+|+|.||..++..|.+.| ++|+++|+++++++... ..+ +. .....+.-..++ +.+
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~-----------~~~-~~-----~~~~d~~~~~~~~~~~ 67 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLN-----------RMG-VA-----TKQVDAKDEAGLAKAL 67 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH-----------TTT-CE-----EEECCTTCHHHHHHHT
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH-----------hCC-Cc-----EEEecCCCHHHHHHHH
Confidence 478999999999999999999999 99999999998866542 111 00 000000000111 345
Q ss_pred CCCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCC
Q 004972 383 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 424 (721)
Q Consensus 383 ~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~ 424 (721)
+++|+||.|+| ......+..... ..+.-.+..++...
T Consensus 68 ~~~d~vi~~~~--~~~~~~~~~~~~---~~g~~~~~~~~~~~ 104 (118)
T 3ic5_A 68 GGFDAVISAAP--FFLTPIIAKAAK---AAGAHYFDLTEDVA 104 (118)
T ss_dssp TTCSEEEECSC--GGGHHHHHHHHH---HTTCEEECCCSCHH
T ss_pred cCCCEEEECCC--chhhHHHHHHHH---HhCCCEEEecCcHH
Confidence 78999999998 444444444332 23444444444443
No 262
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=97.80 E-value=8.7e-05 Score=80.54 Aligned_cols=120 Identities=14% Similarity=0.150 Sum_probs=73.4
Q ss_pred ceeEEEEcCCCC-cHHHHHHHHH--C---CCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccC
Q 004972 305 VRKVAVIGGGLM-GSGIATAHIL--N---NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLD 378 (721)
Q Consensus 305 ~~kI~VIG~G~m-G~~iA~~la~--~---G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~ 378 (721)
.+||+|||+|.. +.++...|+. . +.+|+++|+++++++.+.+ +...+ .... .++..++|
T Consensus 2 ~~KI~IIGaG~v~~~~l~~~l~~~~~~l~~~el~L~Di~~~~~~~~~~-~~~~~---~~~~-----------~~v~~t~d 66 (417)
T 1up7_A 2 HMRIAVIGGGSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVD-FVKRL---VKDR-----------FKVLISDT 66 (417)
T ss_dssp CCEEEEETTTCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHH-HHHHH---HTTS-----------SEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcccCCCcCEEEEEeCCHHHHHHHHH-HHHHH---hhCC-----------eEEEEeCC
Confidence 369999999985 2222234455 3 4589999999998776332 21111 1110 24677778
Q ss_pred c-cccCCCCEEEEcccC----------------------------------ChHHHHHHHHHHHhhCCCCeEEEecCCCC
Q 004972 379 Y-SEFKDVDMVIEAVIE----------------------------------SVPLKQKIFSELEKACPPHCILATNTSTI 423 (721)
Q Consensus 379 ~-~~l~~aDlVIeavpe----------------------------------~~~~k~~v~~~l~~~~~~~~ii~s~ts~~ 423 (721)
+ +++++||+||.++-- +..+..++.+++.+++ +++++.-|...
T Consensus 67 ~~~al~~AD~Viitagvg~~~~~~rd~~i~~k~glvgqeT~G~GGi~~~~rni~i~~~i~~~i~~~~--~A~lin~TNPv 144 (417)
T 1up7_A 67 FEGAVVDAKYVIFQFRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAFPIVEEYVDTVRKTS--NATIVNFTNPS 144 (417)
T ss_dssp HHHHHTTCSEEEECCCTTHHHHHHHHHHGGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHTT--CCEEEECSSSH
T ss_pred HHHHhCCCCEEEEcCCCCCCCccchhhhhhhhcCcccccccccchhHHhhccHHHHHHHHHHHHHHC--CEEEEEeCChH
Confidence 7 889999999999821 1134667778888888 67776555443
Q ss_pred CH-HHHhcccCCCCcEEEe
Q 004972 424 DL-NIVGEKTSSQDRIIGA 441 (721)
Q Consensus 424 ~i-~~l~~~~~~~~r~ig~ 441 (721)
.+ ++.........|++|+
T Consensus 145 di~t~a~~k~~p~~rviG~ 163 (417)
T 1up7_A 145 GHITEFVRNYLEYEKFIGL 163 (417)
T ss_dssp HHHHHHHHHTTCCSSEEEC
T ss_pred HHHHHHHHHhCCCCCEEEe
Confidence 32 3333233333477763
No 263
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=97.79 E-value=4.9e-06 Score=87.94 Aligned_cols=100 Identities=16% Similarity=0.068 Sum_probs=70.5
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cccCC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 384 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 384 (721)
++|+|||.|.||..+|..+...|++|++||++++.. . . ...... ++ +.+++
T Consensus 146 ~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~------------~-------------~~~~~~-~l~ell~~ 197 (333)
T 1dxy_A 146 QTVGVMGTGHIGQVAIKLFKGFGAKVIAYDPYPMKG--D------------H-------------PDFDYV-SLEDLFKQ 197 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSS--C------------C-------------TTCEEC-CHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEECCCcchh--h------------H-------------hccccC-CHHHHHhc
Confidence 589999999999999999999999999999986431 0 0 001112 34 55789
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCC--CCHHHHhcccC
Q 004972 385 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST--IDLNIVGEKTS 433 (721)
Q Consensus 385 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~--~~i~~l~~~~~ 433 (721)
||+|+.++|.+.+...-+-++..+.++++++++..+++ +....+.+.+.
T Consensus 198 aDvV~~~~P~~~~t~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~ 248 (333)
T 1dxy_A 198 SDVIDLHVPGIEQNTHIINEAAFNLMKPGAIVINTARPNLIDTQAMLSNLK 248 (333)
T ss_dssp CSEEEECCCCCGGGTTSBCHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHH
T ss_pred CCEEEEcCCCchhHHHHhCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHH
Confidence 99999999977665443324566678999988755544 33345555554
No 264
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=97.78 E-value=9.6e-05 Score=77.36 Aligned_cols=94 Identities=16% Similarity=0.229 Sum_probs=63.1
Q ss_pred eeEEEEcC-CCCcHHHHHHHHHCC--CceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCcee---ccCc
Q 004972 306 RKVAVIGG-GLMGSGIATAHILNN--IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG---VLDY 379 (721)
Q Consensus 306 ~kI~VIG~-G~mG~~iA~~la~~G--~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~---~~~~ 379 (721)
+||+|||+ |.+|.+++..|+..| .+|+++|+++. +.... . +..... ..++.. ++++
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~--~~~a~----d----L~~~~~--------~~~l~~~~~t~d~ 62 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHT--PGVAA----D----LSHIET--------RATVKGYLGPEQL 62 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSH--HHHHH----H----HTTSSS--------SCEEEEEESGGGH
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCcc--HHHHH----H----HhccCc--------CceEEEecCCCCH
Confidence 38999998 999999999999988 68999999971 11100 0 111110 013444 3567
Q ss_pred c-ccCCCCEEEEccc--CCh------------HHHHHHHHHHHhhCCCCeEEEe
Q 004972 380 S-EFKDVDMVIEAVI--ESV------------PLKQKIFSELEKACPPHCILAT 418 (721)
Q Consensus 380 ~-~l~~aDlVIeavp--e~~------------~~k~~v~~~l~~~~~~~~ii~s 418 (721)
+ ++++||+||.++. ... .+.+++.+.+.++++ +++++.
T Consensus 63 ~~a~~~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p-~a~viv 115 (314)
T 1mld_A 63 PDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCP-DAMICI 115 (314)
T ss_dssp HHHHTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCT-TSEEEE
T ss_pred HHHhCCCCEEEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCC-CeEEEE
Confidence 4 6999999999873 211 567777778888874 444443
No 265
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=97.77 E-value=4.4e-06 Score=89.31 Aligned_cols=110 Identities=11% Similarity=0.069 Sum_probs=72.1
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cccCC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 384 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 384 (721)
++|||||.|.||.++|..+...|++|++||++++.. ..+ .. ..++ +.+++
T Consensus 117 ~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~---------------~~g-------------~~-~~~l~ell~~ 167 (380)
T 2o4c_A 117 RTYGVVGAGQVGGRLVEVLRGLGWKVLVCDPPRQAR---------------EPD-------------GE-FVSLERLLAE 167 (380)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECHHHHHH---------------STT-------------SC-CCCHHHHHHH
T ss_pred CEEEEEeCCHHHHHHHHHHHHCCCEEEEEcCChhhh---------------ccC-------------cc-cCCHHHHHHh
Confidence 589999999999999999999999999999765421 001 01 1233 45689
Q ss_pred CCEEEEcccCChH----HHHHHHHHHHhhCCCCeEEEecCCCC--CHHHHhcccCCC-CcEEEecCC
Q 004972 385 VDMVIEAVIESVP----LKQKIFSELEKACPPHCILATNTSTI--DLNIVGEKTSSQ-DRIIGAHFF 444 (721)
Q Consensus 385 aDlVIeavpe~~~----~k~~v~~~l~~~~~~~~ii~s~ts~~--~i~~l~~~~~~~-~r~ig~h~~ 444 (721)
||+|+.++|-..+ ...-+-++..+.++++++++..+.+- ....+.+.+... -...++..|
T Consensus 168 aDvV~l~~Plt~~g~~~T~~li~~~~l~~mk~gailIN~sRG~vvd~~aL~~aL~~g~i~~A~LDV~ 234 (380)
T 2o4c_A 168 ADVISLHTPLNRDGEHPTRHLLDEPRLAALRPGTWLVNASRGAVVDNQALRRLLEGGADLEVALDVW 234 (380)
T ss_dssp CSEEEECCCCCSSSSSCCTTSBCHHHHHTSCTTEEEEECSCGGGBCHHHHHHHHHTTCCEEEEESCC
T ss_pred CCEEEEeccCccccccchhhhcCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCCceEEeeee
Confidence 9999999996554 33322245667789999887544442 334555555322 233444444
No 266
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=97.77 E-value=6.5e-05 Score=78.32 Aligned_cols=119 Identities=18% Similarity=0.314 Sum_probs=72.2
Q ss_pred eeEEEEc-CCCCcHHHHHHHHHCCC--ceEEEeC--CHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCcc
Q 004972 306 RKVAVIG-GGLMGSGIATAHILNNI--YVVLKEV--NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS 380 (721)
Q Consensus 306 ~kI~VIG-~G~mG~~iA~~la~~G~--~V~l~d~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~ 380 (721)
+||+|+| +|.+|.+++..|+..|+ +++++|+ ++++++.....+.+... + . .. -.+.. ++++
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~-~-~-~~----------~~v~~-~~~~ 66 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIA-Y-D-SN----------TRVRQ-GGYE 66 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHT-T-T-CC----------CEEEE-CCGG
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHh-h-C-CC----------cEEEe-CCHH
Confidence 4899999 99999999999998886 7999999 87765432222221111 0 0 00 12332 3567
Q ss_pred ccCCCCEEEEcccC--C------------hHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhcc----cC-CCCcEEEe
Q 004972 381 EFKDVDMVIEAVIE--S------------VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEK----TS-SQDRIIGA 441 (721)
Q Consensus 381 ~l~~aDlVIeavpe--~------------~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~~l~~~----~~-~~~r~ig~ 441 (721)
++++||+||.+..- . ....+++.+.+.++. ++.+++.. +.|+..+... .. .+.|++|+
T Consensus 67 a~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-p~~~viv~--SNPv~~~~~~~~~~~~~p~~rviG~ 143 (303)
T 1o6z_A 67 DTAGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHN-DDYISLTT--SNPVDLLNRHLYEAGDRSREQVIGF 143 (303)
T ss_dssp GGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTC-SCCEEEEC--CSSHHHHHHHHHHHSSSCGGGEEEC
T ss_pred HhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEEe--CChHHHHHHHHHHHcCCCHHHeeec
Confidence 89999999988742 1 135566666777765 45555543 3344333222 22 34577765
No 267
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=97.77 E-value=9.7e-06 Score=83.41 Aligned_cols=91 Identities=14% Similarity=0.162 Sum_probs=63.7
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cccCC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 384 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 384 (721)
++|+|||+|.||.+++..|.+.|++|+++|+++++++...+ . . .+...+++ +.+++
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~-----------~-----------~-g~~~~~~~~~~~~~ 186 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQ-----------K-----------F-PLEVVNSPEEVIDK 186 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTT-----------T-----------S-CEEECSCGGGTGGG
T ss_pred CEEEEECchHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHH-----------H-----------c-CCeeehhHHhhhcC
Confidence 58999999999999999999999999999999987655311 0 0 12333344 56789
Q ss_pred CCEEEEcccCChHHH-HHHHHHHHhhCCCCeEEEecCC
Q 004972 385 VDMVIEAVIESVPLK-QKIFSELEKACPPHCILATNTS 421 (721)
Q Consensus 385 aDlVIeavpe~~~~k-~~v~~~l~~~~~~~~ii~s~ts 421 (721)
+|+||.|+|...... ...+. ...+++++++++...
T Consensus 187 aDiVi~atp~~~~~~~~~~i~--~~~l~~g~~viDv~~ 222 (275)
T 2hk9_A 187 VQVIVNTTSVGLKDEDPEIFN--YDLIKKDHVVVDIIY 222 (275)
T ss_dssp CSEEEECSSTTSSTTCCCSSC--GGGCCTTSEEEESSS
T ss_pred CCEEEEeCCCCCCCCCCCCCC--HHHcCCCCEEEEcCC
Confidence 999999998554210 01111 245678888877655
No 268
>4gm2_A ATP-dependent CLP protease proteolytic subunit; structural genomics, structural genomics consortium, SGC, PR hydrolase; 2.80A {Plasmodium falciparum} PDB: 4hnk_A
Probab=97.75 E-value=6.7e-05 Score=72.64 Aligned_cols=141 Identities=15% Similarity=0.117 Sum_probs=94.6
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCceEE--EEEeCCCC----CcCCCCchhhhhccCCCcccccchHHHHHHHHHHhhCCCc
Q 004972 27 ALAIPIVAGLKDKFEEATSRDDVKAI--VLTGNGGR----FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKP 100 (721)
Q Consensus 27 al~~~~~~~l~~~l~~~~~~~~v~~v--Vltg~g~~----F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~p 100 (721)
.++.++.+.+...|..++.++..+-| .|.+.|.. ...-+|+ .....++ +.+...+.|
T Consensus 36 ~I~d~~a~~iiaqLl~L~~ed~~k~I~lyINSpG~~~~~~~~~~G~v----------------~aglaIy-d~m~~~~~~ 98 (205)
T 4gm2_A 36 PIYPHISEQIISQLLYLEYESKRKPIHLYINSTGDIDNNKIINLNGI----------------TDVISIV-DVINYISSD 98 (205)
T ss_dssp CCCHHHHHHHHHHHHHHHHHCTTCCEEEEEEECTTEETTEESCTTHH----------------HHHHHHH-HHHHHSSSC
T ss_pred EEcHHHHHHHHHHHHHHHhcCCCCCEEEEEeCCCCCCcCCCCCCCCH----------------HHHHHHH-HHHHhcCCC
Confidence 48899999999999988854433333 33444411 0000111 1223555 668889999
Q ss_pred EEEEECCcccccchHhhhhcC--EEEeeCCceEeCcccccCcccc--c-----------------cccccc--cCHHHHH
Q 004972 101 IVAAVEGLALGGGLELAMGCH--ARIAAPKTQLGLPELTLGVIPG--T-----------------QRLPRL--VGLSKAI 157 (721)
Q Consensus 101 ~Iaav~G~a~GgG~~lalacD--~ria~~~a~~~~pe~~~Gl~P~--~-----------------~~l~r~--~G~~~a~ 157 (721)
|...+-|.|.+.|.-|++++| .|++.+++++.+....-|..-| + ..+.+. .......
T Consensus 99 V~t~~~G~AaS~as~il~aG~~gkR~~lP~a~iMIHqP~~~~~~G~a~di~i~a~el~~~~~~i~~iya~~TG~~~e~I~ 178 (205)
T 4gm2_A 99 VYTYCLGKAYGIACILASSGKKGYRFSLKNSSFCLNQSYSIIPFNQATNIEIQNKEIMNTKKKVIEIISKNTEKDTNVIS 178 (205)
T ss_dssp EEEEEEEEEETHHHHHHTTSCTTCEEECTTCEEEECCCCCCCCSSCCSCHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHH
T ss_pred EEEEEEeeehhHHHHHHhcCCCCCEEecCCCEEEEecCcccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH
Confidence 999999999999999999999 5999999999876665443122 1 011111 1233444
Q ss_pred HHHHcCCCcCHHHHHHcCCccEEcCCc
Q 004972 158 EMMLLSKSITSEEGWKLGLIDAVVTSE 184 (721)
Q Consensus 158 ~l~ltg~~~~a~eA~~~Glv~~vv~~~ 184 (721)
+++-....++|+||+++||||+|++.+
T Consensus 179 ~~m~rd~~msa~EA~eyGlID~V~~~e 205 (205)
T 4gm2_A 179 NVLERDKYFNADEAVDFKLIDHILEKE 205 (205)
T ss_dssp HHTTSCEEEEHHHHHHTTSCSEECCC-
T ss_pred HHhcCCcccCHHHHHHcCCccEeecCC
Confidence 555566679999999999999998653
No 269
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=97.72 E-value=0.00019 Score=65.56 Aligned_cols=39 Identities=18% Similarity=0.225 Sum_probs=36.6
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHH
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKG 344 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~ 344 (721)
++|.|+|+|.+|..+|..|.+.|++|+++|++++.++.+
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~ 46 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDEL 46 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHH
Confidence 579999999999999999999999999999999987765
No 270
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=97.72 E-value=8.3e-05 Score=78.31 Aligned_cols=102 Identities=18% Similarity=0.244 Sum_probs=65.8
Q ss_pred ceeEEEEc-CCCCcHHHHHHHHHCC--CceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCcee---ccC
Q 004972 305 VRKVAVIG-GGLMGSGIATAHILNN--IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG---VLD 378 (721)
Q Consensus 305 ~~kI~VIG-~G~mG~~iA~~la~~G--~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~---~~~ 378 (721)
.+||+|+| +|.+|.+++..|+..| .+|+++|++++. ..+. + +..... ...+.. +++
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~-~~~~----d-----L~~~~~--------~~~v~~~~~t~d 69 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAP-GVTA----D-----ISHMDT--------GAVVRGFLGQQQ 69 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHH-HHHH----H-----HHTSCS--------SCEEEEEESHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcH-hHHH----H-----hhcccc--------cceEEEEeCCCC
Confidence 46899999 7999999999999998 799999998761 1111 0 111100 012333 445
Q ss_pred c-cccCCCCEEEEcccC--C------------hHHHHHHHHHHHhhCCCCeEEEecCCCCCHHH
Q 004972 379 Y-SEFKDVDMVIEAVIE--S------------VPLKQKIFSELEKACPPHCILATNTSTIDLNI 427 (721)
Q Consensus 379 ~-~~l~~aDlVIeavpe--~------------~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~~ 427 (721)
+ +++++||+||.++.- . ....+.+.+.+.++. ++.+++..| .|+..
T Consensus 70 ~~~al~gaDvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~-p~~~viv~S--NPv~~ 130 (326)
T 1smk_A 70 LEAALTGMDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCC-PRAIVNLIS--NPVNS 130 (326)
T ss_dssp HHHHHTTCSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHC-TTSEEEECC--SSHHH
T ss_pred HHHHcCCCCEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEEC--CchHH
Confidence 5 668999999999842 1 145666777777776 455554433 44443
No 271
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=97.72 E-value=6.5e-05 Score=68.57 Aligned_cols=81 Identities=21% Similarity=0.189 Sum_probs=58.7
Q ss_pred ceeEEEEcC----CCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCcc
Q 004972 305 VRKVAVIGG----GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS 380 (721)
Q Consensus 305 ~~kI~VIG~----G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~ 380 (721)
-++|+|||+ |.||..++..|.+.|++|+.+|++.+.+ ..+....+++
T Consensus 14 p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~i-----------------------------~G~~~~~s~~ 64 (138)
T 1y81_A 14 FRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEI-----------------------------EGLKCYRSVR 64 (138)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE-----------------------------TTEECBSSGG
T ss_pred CCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCeE-----------------------------CCeeecCCHH
Confidence 468999999 9999999999999999866666543211 1234445553
Q ss_pred c-cCCCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEE
Q 004972 381 E-FKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 417 (721)
Q Consensus 381 ~-l~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~ 417 (721)
+ .+.+|+||.++| .+...+++.++.+ ...+.+++
T Consensus 65 el~~~vDlvii~vp--~~~v~~v~~~~~~-~g~~~i~~ 99 (138)
T 1y81_A 65 ELPKDVDVIVFVVP--PKVGLQVAKEAVE-AGFKKLWF 99 (138)
T ss_dssp GSCTTCCEEEECSC--HHHHHHHHHHHHH-TTCCEEEE
T ss_pred HhCCCCCEEEEEeC--HHHHHHHHHHHHH-cCCCEEEE
Confidence 3 467999999999 6777788877665 44556554
No 272
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.72 E-value=0.00014 Score=69.65 Aligned_cols=39 Identities=18% Similarity=0.201 Sum_probs=35.9
Q ss_pred eeEEEEcCCCCcHHHHHHHHHC-CCceEEEeCCHHHHHHH
Q 004972 306 RKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKG 344 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~-G~~V~l~d~~~~~~~~~ 344 (721)
++|.|+|+|.||..+|..|.+. |++|+++|+++++++.+
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~ 79 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQH 79 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHH
Confidence 4799999999999999999999 99999999999887654
No 273
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=97.67 E-value=6.2e-06 Score=87.12 Aligned_cols=100 Identities=16% Similarity=0.049 Sum_probs=68.7
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cccCC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 384 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 384 (721)
++|+|||+|.||..+|+.+...|++|++||++++.. . + ..+... ++ +.+++
T Consensus 147 ~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~------------~-------------~~~~~~-~l~ell~~ 198 (331)
T 1xdw_A 147 CTVGVVGLGRIGRVAAQIFHGMGATVIGEDVFEIKG--I------------E-------------DYCTQV-SLDEVLEK 198 (331)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCS--C------------T-------------TTCEEC-CHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEECCCccHH--H------------H-------------hccccC-CHHHHHhh
Confidence 589999999999999999999999999999986531 0 0 001112 34 55689
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCC--CCHHHHhcccC
Q 004972 385 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST--IDLNIVGEKTS 433 (721)
Q Consensus 385 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~--~~i~~l~~~~~ 433 (721)
||+|+.++|.+.+...-+-++..+.++++++++..+.+ +....+.+.+.
T Consensus 199 aDvV~~~~p~t~~t~~li~~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~ 249 (331)
T 1xdw_A 199 SDIITIHAPYIKENGAVVTRDFLKKMKDGAILVNCARGQLVDTEAVIEAVE 249 (331)
T ss_dssp CSEEEECCCCCTTTCCSBCHHHHHTSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred CCEEEEecCCchHHHHHhCHHHHhhCCCCcEEEECCCcccccHHHHHHHHH
Confidence 99999999966544332224555678999988754443 33345555553
No 274
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=97.65 E-value=0.00014 Score=67.78 Aligned_cols=38 Identities=24% Similarity=0.283 Sum_probs=35.0
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHH
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLK 343 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~ 343 (721)
++|.|+|+|.+|..++..|...|++|+++|++++.++.
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~~~ 57 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAFHR 57 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGGGG
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHH
Confidence 58999999999999999999999999999999987544
No 275
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=97.63 E-value=8.3e-05 Score=78.44 Aligned_cols=102 Identities=15% Similarity=0.122 Sum_probs=67.4
Q ss_pred ceeEEEEcC-CCCcHHHHHHHHHCCC-------ceEEEeCC----HHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcC
Q 004972 305 VRKVAVIGG-GLMGSGIATAHILNNI-------YVVLKEVN----SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKM 372 (721)
Q Consensus 305 ~~kI~VIG~-G~mG~~iA~~la~~G~-------~V~l~d~~----~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 372 (721)
.+||+|+|+ |.+|++++..|+..|+ +|+++|++ +++++.....+ ..... .....
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl--------~~~~~------~~~~~ 70 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEI--------DDCAF------PLLAG 70 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHH--------HTTTC------TTEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHH--------hhhcc------cccCc
Confidence 368999998 9999999999999886 89999999 55443211111 11100 01234
Q ss_pred ceeccCc-cccCCCCEEEEcccC--------------ChHHHHHHHHHHHhhCCCCeEEEecC
Q 004972 373 LKGVLDY-SEFKDVDMVIEAVIE--------------SVPLKQKIFSELEKACPPHCILATNT 420 (721)
Q Consensus 373 i~~~~~~-~~l~~aDlVIeavpe--------------~~~~k~~v~~~l~~~~~~~~ii~s~t 420 (721)
+..+++. +++++||+||.+..- +..+.+.+.+.+.+++.++++|+..|
T Consensus 71 i~~~~~~~~al~~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~S 133 (329)
T 1b8p_A 71 MTAHADPMTAFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVG 133 (329)
T ss_dssp EEEESSHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred EEEecCcHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcc
Confidence 5556664 779999999987631 22456667778888875665555433
No 276
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=97.62 E-value=5.9e-05 Score=69.50 Aligned_cols=101 Identities=12% Similarity=0.018 Sum_probs=66.3
Q ss_pred eeEEEEcC----CCCcHHHHHHHHHCCCceEEEeCCH--HHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc
Q 004972 306 RKVAVIGG----GLMGSGIATAHILNNIYVVLKEVNS--EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 379 (721)
Q Consensus 306 ~kI~VIG~----G~mG~~iA~~la~~G~~V~l~d~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~ 379 (721)
++|+|||+ |.||..++..|.+.|++|+.+|++. +.+ ..+....++
T Consensus 14 ~~IavIGas~~~g~~G~~~~~~L~~~G~~v~~vnp~~~g~~i-----------------------------~G~~~~~sl 64 (145)
T 2duw_A 14 RTIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAGKTL-----------------------------LGQQGYATL 64 (145)
T ss_dssp CCEEEESCCSCTTSHHHHHHHHHHHHTCCEEEECSSSTTSEE-----------------------------TTEECCSST
T ss_pred CEEEEECcCCCCCChHHHHHHHHHHCCCEEEEeCCccccccc-----------------------------CCeeccCCH
Confidence 57999999 8999999999999999977777654 211 123444455
Q ss_pred cc-cCCCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhcccC-CCCcEEE
Q 004972 380 SE-FKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTS-SQDRIIG 440 (721)
Q Consensus 380 ~~-l~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~~l~~~~~-~~~r~ig 440 (721)
++ ...+|+||.++| .+...+++.++.+ .....+++. +++. ..++.+... ..-+++|
T Consensus 65 ~el~~~~Dlvii~vp--~~~v~~v~~~~~~-~g~~~i~i~-~~~~-~~~l~~~a~~~Gi~~ig 122 (145)
T 2duw_A 65 ADVPEKVDMVDVFRN--SEAAWGVAQEAIA-IGAKTLWLQ-LGVI-NEQAAVLAREAGLSVVM 122 (145)
T ss_dssp TTCSSCCSEEECCSC--STHHHHHHHHHHH-HTCCEEECC-TTCC-CHHHHHHHHTTTCEEEC
T ss_pred HHcCCCCCEEEEEeC--HHHHHHHHHHHHH-cCCCEEEEc-CChH-HHHHHHHHHHcCCEEEc
Confidence 33 467899999999 4666677777665 345566654 4444 334444332 3345554
No 277
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=97.59 E-value=0.00026 Score=64.31 Aligned_cols=39 Identities=26% Similarity=0.264 Sum_probs=35.4
Q ss_pred ceeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHH
Q 004972 305 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLK 343 (721)
Q Consensus 305 ~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~ 343 (721)
+++|.|+|+|.+|..++..|.+.|++|+++|++++.++.
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~ 44 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNA 44 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHT
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 467999999999999999999999999999999877554
No 278
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=97.59 E-value=0.00011 Score=81.18 Aligned_cols=75 Identities=13% Similarity=0.192 Sum_probs=49.8
Q ss_pred eeEEEEcCCCCcHHH--HHHHHH----C--CCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceecc
Q 004972 306 RKVAVIGGGLMGSGI--ATAHIL----N--NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL 377 (721)
Q Consensus 306 ~kI~VIG~G~mG~~i--A~~la~----~--G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~ 377 (721)
+||+|||+|..|... ...++. . +.+|+++|+++++++.....+++..... + .--++..++
T Consensus 1 mKI~iIGaGs~~~t~~l~~~~~~~~~l~~~~~ei~L~Di~~~rl~~~~~~~~~~~~~~---~---------~~~~i~~t~ 68 (477)
T 3u95_A 1 MKISIVGAGSVRFALQLVEDIAQTDELSREDTHIYLMDVHERRLNASYILARKYVEEL---N---------SPVKVVKTE 68 (477)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTCTTTCSTTCEEEEECSCHHHHHHHHHHHHHHHHHH---T---------CCCEEEEES
T ss_pred CEEEEECCCchhhHHHHHHHHHhhHhcCCCCCEEEEECCCHHHHHHHHHHHHHHHHHc---C---------CCeEEEEeC
Confidence 489999999987553 222332 2 3479999999998876543333322211 1 012477788
Q ss_pred Cc-cccCCCCEEEEcc
Q 004972 378 DY-SEFKDVDMVIEAV 392 (721)
Q Consensus 378 ~~-~~l~~aDlVIeav 392 (721)
|. +++++||+||.++
T Consensus 69 d~~eAl~gAD~Vi~~~ 84 (477)
T 3u95_A 69 SLDEAIEGADFIINTA 84 (477)
T ss_dssp CHHHHHTTCSEEEECC
T ss_pred CHHHHhCCCCEEEECc
Confidence 88 6789999999886
No 279
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=97.57 E-value=0.00017 Score=74.78 Aligned_cols=88 Identities=22% Similarity=0.275 Sum_probs=60.2
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cccCC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 384 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 384 (721)
++|+|||+|.||..+|..+...|.+|+++|++++..+.+. +.|. ..+. ..++ +.+++
T Consensus 156 ~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~-----------~~g~----------~~~~-~~~l~~~l~~ 213 (293)
T 3d4o_A 156 ANVAVLGLGRVGMSVARKFAALGAKVKVGARESDLLARIA-----------EMGM----------EPFH-ISKAAQELRD 213 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-----------HTTS----------EEEE-GGGHHHHTTT
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-----------HCCC----------eecC-hhhHHHHhcC
Confidence 5899999999999999999999999999999987654321 1110 0010 1233 45789
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecC
Q 004972 385 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 420 (721)
Q Consensus 385 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~t 420 (721)
+|+||.++|...-.. +....++++.++++.+
T Consensus 214 aDvVi~~~p~~~i~~-----~~l~~mk~~~~lin~a 244 (293)
T 3d4o_A 214 VDVCINTIPALVVTA-----NVLAEMPSHTFVIDLA 244 (293)
T ss_dssp CSEEEECCSSCCBCH-----HHHHHSCTTCEEEECS
T ss_pred CCEEEECCChHHhCH-----HHHHhcCCCCEEEEec
Confidence 999999999533211 2233567777776543
No 280
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=97.55 E-value=9.3e-05 Score=77.03 Aligned_cols=88 Identities=19% Similarity=0.212 Sum_probs=60.1
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cccCC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 384 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 384 (721)
++|+|||+|.||..+|..+...|.+|++||+++++.+... +.|. ..+. ..++ +.+++
T Consensus 158 ~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~-----------~~g~----------~~~~-~~~l~~~l~~ 215 (300)
T 2rir_A 158 SQVAVLGLGRTGMTIARTFAALGANVKVGARSSAHLARIT-----------EMGL----------VPFH-TDELKEHVKD 215 (300)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-----------HTTC----------EEEE-GGGHHHHSTT
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----------HCCC----------eEEc-hhhHHHHhhC
Confidence 5899999999999999999999999999999987654321 1110 0011 1233 45789
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecC
Q 004972 385 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 420 (721)
Q Consensus 385 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~t 420 (721)
||+||.++|...-. ++....+++++++++.+
T Consensus 216 aDvVi~~~p~~~i~-----~~~~~~mk~g~~lin~a 246 (300)
T 2rir_A 216 IDICINTIPSMILN-----QTVLSSMTPKTLILDLA 246 (300)
T ss_dssp CSEEEECCSSCCBC-----HHHHTTSCTTCEEEECS
T ss_pred CCEEEECCChhhhC-----HHHHHhCCCCCEEEEEe
Confidence 99999999953221 12334567777776443
No 281
>3bf0_A Protease 4; bacterial, hydrolase, inner membrane, membrane, transmembrane; 2.55A {Escherichia coli} PDB: 3bez_A
Probab=97.54 E-value=0.00033 Score=79.67 Aligned_cols=141 Identities=18% Similarity=0.136 Sum_probs=93.9
Q ss_pred HHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCC-CCchhhhhccCCCcccccchHHHHHHHHHHhhCCCcEEEEECCccc
Q 004972 32 IVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGG-FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLAL 110 (721)
Q Consensus 32 ~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG-~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~p~Iaav~G~a~ 110 (721)
...++.+.|+.+.+|+.++.|+|.-. |.| +++.... ...+.+ +.+....|||||.+++ +.
T Consensus 71 ~~~~i~~~L~~a~~d~~ik~I~L~in----spGgG~v~~~~-------------~I~~~i-~~~k~~gkpvva~~~~-aa 131 (593)
T 3bf0_A 71 SLFDIVNTIRQAKDDRNITGIVMDLK----NFAGGDQPSMQ-------------YIGKAL-KEFRDSGKPVYAVGEN-YS 131 (593)
T ss_dssp EHHHHHHHHHHHHHCTTCCCEEEECT----EEEECCHHHHH-------------HHHHHH-HHHHHTTCCEEEEESC-EE
T ss_pred CHHHHHHHHHHHHhCCCceEEEEEeC----CCCCCcHHHHH-------------HHHHHH-HHHHhcCCeEEEEEcc-ch
Confidence 46778899999999999999999753 223 4443221 112333 3355557999999876 66
Q ss_pred ccchHhhhhcCEEEeeCCceEeCccccc------------Cccc-----c------c------------cccc-------
Q 004972 111 GGGLELAMGCHARIAAPKTQLGLPELTL------------GVIP-----G------T------------QRLP------- 148 (721)
Q Consensus 111 GgG~~lalacD~ria~~~a~~~~pe~~~------------Gl~P-----~------~------------~~l~------- 148 (721)
.+|+-|+.+||.+++.+.+.++...+.. |+-+ | . ..+.
T Consensus 132 s~~y~lAsaad~i~~~P~~~vg~~g~~~~~~~~~~~l~klGi~~~~~~~G~~K~a~ep~~r~~ms~~~re~~~~~l~~~~ 211 (593)
T 3bf0_A 132 QGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRDDMSPAAREADSRWIGELW 211 (593)
T ss_dssp HHHHHHHTTSSEEEECTTCCEECCCCBCCEEECHHHHHHTTCEEEEEEECTTCGGGHHHHCSSCCHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHhCCEEEECCCceEEEecccccccCHHHHHHHcCCeEEEEEeecccCCCCcccCCCCCHHHHHHHHHHHHHHH
Confidence 7889999999999999999998876643 3211 0 0 0000
Q ss_pred ----------cccCHHHHHHHHHc-------CCCcCHHHHHHcCCccEEcCCchHHHHHH
Q 004972 149 ----------RLVGLSKAIEMMLL-------SKSITSEEGWKLGLIDAVVTSEELLKVSR 191 (721)
Q Consensus 149 ----------r~~G~~~a~~l~lt-------g~~~~a~eA~~~Glv~~vv~~~~l~~~a~ 191 (721)
|-+......+++-. +..++|++|++.||||++...+++.....
T Consensus 212 ~~~~~~va~~Rg~~~e~l~~~~d~~~~~l~~~~~~ta~~A~~~GLvD~i~~~~e~~~~l~ 271 (593)
T 3bf0_A 212 QNYLNTVAANRQIPAEQVFPGAQGLLEGLTKTGGDTAKYALENKLVDALASSAEIEKALT 271 (593)
T ss_dssp HHHHHHHHHHHTSCHHHHCCHHHHHHHHHHTTTTCHHHHHHHTTSSSEECCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHhhhhhhhhhcCCccHHHHHHCCCCCCCCCHHHHHHHHH
Confidence 11222223333333 78999999999999999997666655443
No 282
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=97.48 E-value=0.00057 Score=67.38 Aligned_cols=95 Identities=16% Similarity=0.157 Sum_probs=60.0
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCC-HHHHHHhhcCceeccCccccCC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT-QDKANNALKMLKGVLDYSEFKD 384 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~i~~~~~~~~l~~ 384 (721)
+||.|+|+|.+|..+|..|.+.|++|+++|++++.++...+. ....+-.|-.+ .... ....+.+
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~----~~~~~i~gd~~~~~~l-----------~~a~i~~ 65 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVIINKDRELCEEFAKK----LKATIIHGDGSHKEIL-----------RDAEVSK 65 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHH----SSSEEEESCTTSHHHH-----------HHHTCCT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH----cCCeEEEcCCCCHHHH-----------HhcCccc
Confidence 479999999999999999999999999999999987764211 00000011000 0000 0023688
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhh-CCCCeEEE
Q 004972 385 VDMVIEAVIESVPLKQKIFSELEKA-CPPHCILA 417 (721)
Q Consensus 385 aDlVIeavpe~~~~k~~v~~~l~~~-~~~~~ii~ 417 (721)
||+||.+++++. ...++..+.+. .+...+++
T Consensus 66 ad~vi~~~~~d~--~n~~~~~~a~~~~~~~~iia 97 (218)
T 3l4b_C 66 NDVVVILTPRDE--VNLFIAQLVMKDFGVKRVVS 97 (218)
T ss_dssp TCEEEECCSCHH--HHHHHHHHHHHTSCCCEEEE
T ss_pred CCEEEEecCCcH--HHHHHHHHHHHHcCCCeEEE
Confidence 999999998543 33444444444 45555554
No 283
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=97.42 E-value=0.0003 Score=73.31 Aligned_cols=98 Identities=17% Similarity=0.223 Sum_probs=62.8
Q ss_pred eeEEEEc-CCCCcHHHHHHHHHC-C--CceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCcee---ccC
Q 004972 306 RKVAVIG-GGLMGSGIATAHILN-N--IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG---VLD 378 (721)
Q Consensus 306 ~kI~VIG-~G~mG~~iA~~la~~-G--~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~---~~~ 378 (721)
+||+||| +|.+|.+++..|+.. + .+++++|+++ .++.-...+ ..... ...+.. +++
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl--------~~~~~--------~~~v~~~~~~~~ 63 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDL--------SHIPT--------AVKIKGFSGEDA 63 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHH--------HTSCS--------SEEEEEECSSCC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHh--------hCCCC--------CceEEEecCCCc
Confidence 4899999 899999999999875 5 4899999987 332111111 11100 012332 245
Q ss_pred ccccCCCCEEEEcccC--------------ChHHHHHHHHHHHhhCCCCeEEEecCC
Q 004972 379 YSEFKDVDMVIEAVIE--------------SVPLKQKIFSELEKACPPHCILATNTS 421 (721)
Q Consensus 379 ~~~l~~aDlVIeavpe--------------~~~~k~~v~~~l~~~~~~~~ii~s~ts 421 (721)
++++++||+||.+..- +..+.+++.+.+.++++ +++++..|.
T Consensus 64 ~~~~~~aDivii~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~~p-~a~vlvvtN 119 (312)
T 3hhp_A 64 TPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCP-KACIGIITN 119 (312)
T ss_dssp HHHHTTCSEEEECCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHHCT-TSEEEECSS
T ss_pred HHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC-CcEEEEecC
Confidence 6889999999998732 33455666677888764 555554443
No 284
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=97.40 E-value=0.00022 Score=72.65 Aligned_cols=64 Identities=17% Similarity=0.230 Sum_probs=49.7
Q ss_pred eEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cccCCC
Q 004972 307 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKDV 385 (721)
Q Consensus 307 kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~a 385 (721)
+|+|||+|.||.+++..|...|++|+++|+++++++...+.+ + .. .+++ +. +++
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~----------~-------------~~-~~~~~~~-~~~ 172 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRTPQRALALAEEF----------G-------------LR-AVPLEKA-REA 172 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHH----------T-------------CE-ECCGGGG-GGC
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----------c-------------cc-hhhHhhc-cCC
Confidence 799999999999999999999999999999998766542210 1 01 1233 44 889
Q ss_pred CEEEEcccCC
Q 004972 386 DMVIEAVIES 395 (721)
Q Consensus 386 DlVIeavpe~ 395 (721)
|+||.|+|..
T Consensus 173 Divi~~tp~~ 182 (263)
T 2d5c_A 173 RLLVNATRVG 182 (263)
T ss_dssp SEEEECSSTT
T ss_pred CEEEEccCCC
Confidence 9999999954
No 285
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=97.39 E-value=0.00031 Score=70.39 Aligned_cols=87 Identities=20% Similarity=0.142 Sum_probs=57.1
Q ss_pred CceeEEEEcCCCCcHHHHHHHHHCCCceE-EEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCcccc
Q 004972 304 GVRKVAVIGGGLMGSGIATAHILNNIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF 382 (721)
Q Consensus 304 ~~~kI~VIG~G~mG~~iA~~la~~G~~V~-l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l 382 (721)
.|.||+|+|+|.||..++..+...+.+++ ++|++++. . ..+..+++++.+
T Consensus 2 ~MmkI~ViGaGrMG~~i~~~l~~~~~eLva~~d~~~~~----------------~-------------~gv~v~~dl~~l 52 (243)
T 3qy9_A 2 ASMKILLIGYGAMNQRVARLAEEKGHEIVGVIENTPKA----------------T-------------TPYQQYQHIADV 52 (243)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCC-------------------------------CCSCBCSCTTTC
T ss_pred CceEEEEECcCHHHHHHHHHHHhCCCEEEEEEecCccc----------------c-------------CCCceeCCHHHH
Confidence 36799999999999999999998877765 47887652 0 124445666443
Q ss_pred CCCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHH
Q 004972 383 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 426 (721)
Q Consensus 383 ~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~ 426 (721)
.++|+||++.. ++..... +. +..+.-+++.|+++...
T Consensus 53 ~~~DVvIDft~--p~a~~~~---~~--l~~g~~vVigTTG~s~e 89 (243)
T 3qy9_A 53 KGADVAIDFSN--PNLLFPL---LD--EDFHLPLVVATTGEKEK 89 (243)
T ss_dssp TTCSEEEECSC--HHHHHHH---HT--SCCCCCEEECCCSSHHH
T ss_pred hCCCEEEEeCC--hHHHHHH---HH--HhcCCceEeCCCCCCHH
Confidence 39999998775 4332233 22 55555555666666543
No 286
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=97.38 E-value=0.00046 Score=72.74 Aligned_cols=100 Identities=10% Similarity=-0.010 Sum_probs=62.9
Q ss_pred CCceeEEEEcCCCCcHHHHHHHHHC-CCceE-EEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-
Q 004972 303 RGVRKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY- 379 (721)
Q Consensus 303 ~~~~kI~VIG~G~mG~~iA~~la~~-G~~V~-l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~- 379 (721)
+++.||+|||+|.||..++..+.+. +.+|+ ++|+++++++...+. .+.....+++
T Consensus 3 m~~~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~----------------------~~~~~~~~~~~ 60 (330)
T 3e9m_A 3 LDKIRYGIMSTAQIVPRFVAGLRESAQAEVRGIASRRLENAQKMAKE----------------------LAIPVAYGSYE 60 (330)
T ss_dssp CCCEEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCSSSHHHHHHHHH----------------------TTCCCCBSSHH
T ss_pred CCeEEEEEECchHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHH----------------------cCCCceeCCHH
Confidence 4456899999999999999999885 67776 789999886654221 0111234555
Q ss_pred cccC--CCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHH
Q 004972 380 SEFK--DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428 (721)
Q Consensus 380 ~~l~--~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~~l 428 (721)
+.++ ++|+|++|+|.... .++.....+. ..-+++...-+....+.
T Consensus 61 ~ll~~~~~D~V~i~tp~~~h--~~~~~~al~~--gk~vl~EKP~~~~~~e~ 107 (330)
T 3e9m_A 61 ELCKDETIDIIYIPTYNQGH--YSAAKLALSQ--GKPVLLEKPFTLNAAEA 107 (330)
T ss_dssp HHHHCTTCSEEEECCCGGGH--HHHHHHHHHT--TCCEEECSSCCSSHHHH
T ss_pred HHhcCCCCCEEEEcCCCHHH--HHHHHHHHHC--CCeEEEeCCCCCCHHHH
Confidence 3343 79999999995543 2333333222 12255544445555443
No 287
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=97.35 E-value=0.0009 Score=71.24 Aligned_cols=72 Identities=14% Similarity=0.187 Sum_probs=53.6
Q ss_pred CCceeEEEEcCCCCcHHHHHHHHHC--CCceE-EEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc
Q 004972 303 RGVRKVAVIGGGLMGSGIATAHILN--NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 379 (721)
Q Consensus 303 ~~~~kI~VIG~G~mG~~iA~~la~~--G~~V~-l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~ 379 (721)
+++.||+|||+|.||...+..+.+. +++|+ ++|+++++++...+. . .+...+++
T Consensus 11 ~~~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~----------------------~-~~~~~~~~ 67 (354)
T 3q2i_A 11 DRKIRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVER----------------------T-GARGHASL 67 (354)
T ss_dssp SSCEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHH----------------------H-CCEEESCH
T ss_pred CCcceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHH----------------------c-CCceeCCH
Confidence 4567999999999999999999887 67765 899999987664321 1 13456666
Q ss_pred c-ccC--CCCEEEEcccCChH
Q 004972 380 S-EFK--DVDMVIEAVIESVP 397 (721)
Q Consensus 380 ~-~l~--~aDlVIeavpe~~~ 397 (721)
+ .++ ++|+|++|+|....
T Consensus 68 ~~ll~~~~~D~V~i~tp~~~h 88 (354)
T 3q2i_A 68 TDMLAQTDADIVILTTPSGLH 88 (354)
T ss_dssp HHHHHHCCCSEEEECSCGGGH
T ss_pred HHHhcCCCCCEEEECCCcHHH
Confidence 3 343 79999999995443
No 288
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=97.35 E-value=0.00037 Score=73.49 Aligned_cols=104 Identities=15% Similarity=0.168 Sum_probs=67.2
Q ss_pred ceeEEEEcC-CCCcHHHHHHHHHCCC-------ceEEEeCCHHH--HHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCce
Q 004972 305 VRKVAVIGG-GLMGSGIATAHILNNI-------YVVLKEVNSEY--LLKGIKTIEANVRGLVTRGKLTQDKANNALKMLK 374 (721)
Q Consensus 305 ~~kI~VIG~-G~mG~~iA~~la~~G~-------~V~l~d~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~ 374 (721)
--||+|+|+ |.+|.+++..|+.... ++.++|+++.. ++.....+.. ... .....+.
T Consensus 24 ~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~--------~~~------~~~~~~~ 89 (345)
T 4h7p_A 24 AVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELED--------CAF------PLLDKVV 89 (345)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHH--------TTC------TTEEEEE
T ss_pred CCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhh--------cCc------cCCCcEE
Confidence 359999997 9999999999998754 79999997643 2211111111 000 0112344
Q ss_pred eccCc-cccCCCCEEEEcc--cC------------ChHHHHHHHHHHHhhCCCCeEEEecCCC
Q 004972 375 GVLDY-SEFKDVDMVIEAV--IE------------SVPLKQKIFSELEKACPPHCILATNTST 422 (721)
Q Consensus 375 ~~~~~-~~l~~aDlVIeav--pe------------~~~~k~~v~~~l~~~~~~~~ii~s~ts~ 422 (721)
.+++. +++++||+||.+. |- |..+.+++.+.|.++++++++|+..|..
T Consensus 90 ~~~~~~~a~~~advVvi~aG~prkpGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvsNP 152 (345)
T 4h7p_A 90 VTADPRVAFDGVAIAIMCGAFPRKAGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVGNP 152 (345)
T ss_dssp EESCHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSS
T ss_pred EcCChHHHhCCCCEEEECCCCCCCCCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeCCC
Confidence 44444 7799999999865 31 3456666777788888888866544443
No 289
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=97.34 E-value=0.00077 Score=70.45 Aligned_cols=102 Identities=19% Similarity=0.125 Sum_probs=64.6
Q ss_pred eeEEEEcC-CCCcHHHHHHHHHCCC--ceEEEeC--CHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccC--
Q 004972 306 RKVAVIGG-GLMGSGIATAHILNNI--YVVLKEV--NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLD-- 378 (721)
Q Consensus 306 ~kI~VIG~-G~mG~~iA~~la~~G~--~V~l~d~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~-- 378 (721)
+||+|+|+ |.+|.+++..|+..|+ ++.++|+ ++++++.....+.+.. .. .+. ...+..+++
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~-~~--~~~---------~~~i~~~~d~l 68 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDAL-AG--TRS---------DANIYVESDEN 68 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHH-TT--SCC---------CCEEEEEETTC
T ss_pred CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhH-Hh--cCC---------CeEEEeCCcch
Confidence 38999999 9999999999998885 6999999 7765443222222211 00 000 012333343
Q ss_pred ccccCCCCEEEEcc--cC------------ChHHHHHHHHHHHhhCCCCeEEEecCC
Q 004972 379 YSEFKDVDMVIEAV--IE------------SVPLKQKIFSELEKACPPHCILATNTS 421 (721)
Q Consensus 379 ~~~l~~aDlVIeav--pe------------~~~~k~~v~~~l~~~~~~~~ii~s~ts 421 (721)
.+++++||+||.+. |. +....+.+.+.+.++. +.+++..|+
T Consensus 69 ~~al~gaD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~--~~~vlv~SN 123 (313)
T 1hye_A 69 LRIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC--DTKIFVITN 123 (313)
T ss_dssp GGGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC--CCEEEECSS
T ss_pred HHHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC--CeEEEEecC
Confidence 57899999999876 21 2345566667777777 555554443
No 290
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=97.32 E-value=0.00046 Score=72.70 Aligned_cols=100 Identities=20% Similarity=0.131 Sum_probs=70.5
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cccCC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 384 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 384 (721)
++|||||.|.+|..+|..+..-|.+|+.||+....... +. .... .++ +.++.
T Consensus 142 ~tvGIiG~G~IG~~va~~~~~fg~~v~~~d~~~~~~~~-------------~~-------------~~~~-~~l~ell~~ 194 (334)
T 3kb6_A 142 LTLGVIGTGRIGSRVAMYGLAFGMKVLCYDVVKREDLK-------------EK-------------GCVY-TSLDELLKE 194 (334)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHHHH-------------HT-------------TCEE-CCHHHHHHH
T ss_pred cEEEEECcchHHHHHHHhhcccCceeeecCCccchhhh-------------hc-------------Ccee-cCHHHHHhh
Confidence 58999999999999999999999999999987543111 01 1222 233 55789
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCC-C--CCHHHHhcccC
Q 004972 385 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS-T--IDLNIVGEKTS 433 (721)
Q Consensus 385 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts-~--~~i~~l~~~~~ 433 (721)
||+|+.++|-+.+.+.-+=++....++++++|+ |++ + +.-..+.+.+.
T Consensus 195 sDivslh~Plt~~T~~li~~~~l~~mk~~a~lI-N~aRG~iVde~aL~~aL~ 245 (334)
T 3kb6_A 195 SDVISLHVPYTKETHHMINEERISLMKDGVYLI-NTARGKVVDTDALYRAYQ 245 (334)
T ss_dssp CSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEE-ECSCGGGBCHHHHHHHHH
T ss_pred CCEEEEcCCCChhhccCcCHHHHhhcCCCeEEE-ecCccccccHHHHHHHHH
Confidence 999999999776654433355566789999886 555 3 33345655554
No 291
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=97.31 E-value=0.00015 Score=79.92 Aligned_cols=88 Identities=17% Similarity=0.152 Sum_probs=62.2
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cccCC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 384 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 384 (721)
++|+|||.|.||.++|..+...|.+|++||+++.....+. ..| ... .++ +.+++
T Consensus 278 ktVgIIG~G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~-----------~~G-------------~~~-~~l~ell~~ 332 (494)
T 3d64_A 278 KIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQAA-----------MEG-------------YRV-VTMEYAADK 332 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSCHHHHHHHH-----------TTT-------------CEE-CCHHHHTTT
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCChHhHHHHH-----------HcC-------------CEe-CCHHHHHhc
Confidence 5899999999999999999999999999999987632221 111 122 234 56889
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCC
Q 004972 385 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 422 (721)
Q Consensus 385 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~ 422 (721)
||+||.++...--+. ++..+.++++++|+..+++
T Consensus 333 aDiVi~~~~t~~lI~----~~~l~~MK~gAilINvgrg 366 (494)
T 3d64_A 333 ADIFVTATGNYHVIN----HDHMKAMRHNAIVCNIGHF 366 (494)
T ss_dssp CSEEEECSSSSCSBC----HHHHHHCCTTEEEEECSSS
T ss_pred CCEEEECCCcccccC----HHHHhhCCCCcEEEEcCCC
Confidence 999999983221121 3344567899988765554
No 292
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=97.28 E-value=0.00013 Score=80.03 Aligned_cols=96 Identities=16% Similarity=0.151 Sum_probs=65.7
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cccCC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 384 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 384 (721)
++|+|||.|.||.++|..+...|.+|++||+++.....+. ..| ... .++ +.+++
T Consensus 258 ktVgIIG~G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~-----------~~g-------------~~~-~~l~ell~~ 312 (479)
T 1v8b_A 258 KIVVICGYGDVGKGCASSMKGLGARVYITEIDPICAIQAV-----------MEG-------------FNV-VTLDEIVDK 312 (479)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHH-----------TTT-------------CEE-CCHHHHTTT
T ss_pred CEEEEEeeCHHHHHHHHHHHhCcCEEEEEeCChhhHHHHH-----------HcC-------------CEe-cCHHHHHhc
Confidence 5899999999999999999999999999999987643321 111 122 234 56889
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCC---CCHHHHhc
Q 004972 385 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST---IDLNIVGE 430 (721)
Q Consensus 385 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~---~~i~~l~~ 430 (721)
||+||.+.. ...+. -.+..+.++++++|+..+++ +....+.+
T Consensus 313 aDiVi~~~~-t~~lI---~~~~l~~MK~gailiNvgrg~~EId~~aL~~ 357 (479)
T 1v8b_A 313 GDFFITCTG-NVDVI---KLEHLLKMKNNAVVGNIGHFDDEIQVNELFN 357 (479)
T ss_dssp CSEEEECCS-SSSSB---CHHHHTTCCTTCEEEECSSTTTSBCHHHHHT
T ss_pred CCEEEECCC-hhhhc---CHHHHhhcCCCcEEEEeCCCCccccchhhhc
Confidence 999999963 22211 12344567899998765554 23445544
No 293
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=97.27 E-value=0.00099 Score=70.59 Aligned_cols=96 Identities=17% Similarity=0.185 Sum_probs=62.6
Q ss_pred ceeEEEEcCCCCcHHHHHHHHHC-CCceE-EEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cc
Q 004972 305 VRKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SE 381 (721)
Q Consensus 305 ~~kI~VIG~G~mG~~iA~~la~~-G~~V~-l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~ 381 (721)
+.||+|||+|.||..++..+.+. +++|+ ++|+++++++...+ ..+ ....+++ +.
T Consensus 4 ~~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~----------------------~~g-~~~~~~~~~~ 60 (344)
T 3euw_A 4 TLRIALFGAGRIGHVHAANIAANPDLELVVIADPFIEGAQRLAE----------------------ANG-AEAVASPDEV 60 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHH----------------------TTT-CEEESSHHHH
T ss_pred ceEEEEECCcHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHH----------------------HcC-CceeCCHHHH
Confidence 46899999999999999999886 67766 89999988665321 112 3445666 44
Q ss_pred cC--CCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHH
Q 004972 382 FK--DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 427 (721)
Q Consensus 382 l~--~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~~ 427 (721)
++ ++|+|++|+|.... .++.....+. ...+++....+....+
T Consensus 61 l~~~~~D~V~i~tp~~~h--~~~~~~al~~--gk~v~~EKP~~~~~~~ 104 (344)
T 3euw_A 61 FARDDIDGIVIGSPTSTH--VDLITRAVER--GIPALCEKPIDLDIEM 104 (344)
T ss_dssp TTCSCCCEEEECSCGGGH--HHHHHHHHHT--TCCEEECSCSCSCHHH
T ss_pred hcCCCCCEEEEeCCchhh--HHHHHHHHHc--CCcEEEECCCCCCHHH
Confidence 55 79999999995443 3333333322 2235554444555544
No 294
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=97.26 E-value=0.00046 Score=73.19 Aligned_cols=96 Identities=20% Similarity=0.195 Sum_probs=62.3
Q ss_pred eeEEEEcCCCCcHHHHHHHHH--CCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-ccc
Q 004972 306 RKVAVIGGGLMGSGIATAHIL--NNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 382 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~--~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l 382 (721)
++|+|||+|.||..++..+.. ...+|++||++++++++..+.+.. ..| + .+...++. +.+
T Consensus 130 ~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r~~~~a~~la~~~~~------~~g-~----------~~~~~~~~~eav 192 (350)
T 1x7d_A 130 RKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKE------YSG-L----------TIRRASSVAEAV 192 (350)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTT------CTT-C----------EEEECSSHHHHH
T ss_pred CeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHh------ccC-c----------eEEEeCCHHHHH
Confidence 589999999999999988754 346899999999988775432110 001 0 13334555 567
Q ss_pred CCCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCC
Q 004972 383 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 422 (721)
Q Consensus 383 ~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~ 422 (721)
++||+||.|+|.... ..++. ...+++++.|+..+|.
T Consensus 193 ~~aDiVi~aTps~~~--~pvl~--~~~l~~G~~V~~vgs~ 228 (350)
T 1x7d_A 193 KGVDIITTVTADKAY--ATIIT--PDMLEPGMHLNAVGGD 228 (350)
T ss_dssp TTCSEEEECCCCSSE--EEEEC--GGGCCTTCEEEECSCC
T ss_pred hcCCEEEEeccCCCC--Cceec--HHHcCCCCEEEECCCC
Confidence 899999999995410 11111 1456777777655443
No 295
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=97.24 E-value=0.00044 Score=76.38 Aligned_cols=87 Identities=25% Similarity=0.277 Sum_probs=62.5
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cccCC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 384 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 384 (721)
++|+|||+|.||..+|+.+...|.+|+++|+++++++.+.. .| ... .++ +.+++
T Consensus 275 ktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~-----------~G-------------a~~-~~l~e~l~~ 329 (494)
T 3ce6_A 275 KKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQAMM-----------EG-------------FDV-VTVEEAIGD 329 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-----------TT-------------CEE-CCHHHHGGG
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----------cC-------------CEE-ecHHHHHhC
Confidence 58999999999999999999999999999999988665421 12 111 122 44678
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCC
Q 004972 385 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 421 (721)
Q Consensus 385 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts 421 (721)
+|+||+|++....+. .+..+.++++++++..+.
T Consensus 330 aDvVi~atgt~~~i~----~~~l~~mk~ggilvnvG~ 362 (494)
T 3ce6_A 330 ADIVVTATGNKDIIM----LEHIKAMKDHAILGNIGH 362 (494)
T ss_dssp CSEEEECSSSSCSBC----HHHHHHSCTTCEEEECSS
T ss_pred CCEEEECCCCHHHHH----HHHHHhcCCCcEEEEeCC
Confidence 999999987443232 234455788888865443
No 296
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=97.24 E-value=0.0003 Score=70.35 Aligned_cols=78 Identities=19% Similarity=0.158 Sum_probs=53.4
Q ss_pred eEEEEcCCCCcHHHHHHHHHCCCce-EEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-ccc-C
Q 004972 307 KVAVIGGGLMGSGIATAHILNNIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF-K 383 (721)
Q Consensus 307 kI~VIG~G~mG~~iA~~la~~G~~V-~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l-~ 383 (721)
||+|||+|.||..++..+.+.|++| .+||+++. .+ . ..+++ +.+ .
T Consensus 2 ~vgiIG~G~mG~~~~~~l~~~g~~lv~v~d~~~~-~~-----------------------------~--~~~~~~~l~~~ 49 (236)
T 2dc1_A 2 LVGLIGYGAIGKFLAEWLERNGFEIAAILDVRGE-HE-----------------------------K--MVRGIDEFLQR 49 (236)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCC-CT-----------------------------T--EESSHHHHTTS
T ss_pred EEEEECCCHHHHHHHHHHhcCCCEEEEEEecCcc-hh-----------------------------h--hcCCHHHHhcC
Confidence 7999999999999999999999997 69998842 10 0 23344 334 6
Q ss_pred CCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCC
Q 004972 384 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 421 (721)
Q Consensus 384 ~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts 421 (721)
++|+||+|+|. ..-.++.. ..+..+..+++.++
T Consensus 50 ~~DvVv~~~~~--~~~~~~~~---~~l~~G~~vv~~~~ 82 (236)
T 2dc1_A 50 EMDVAVEAASQ--QAVKDYAE---KILKAGIDLIVLST 82 (236)
T ss_dssp CCSEEEECSCH--HHHHHHHH---HHHHTTCEEEESCG
T ss_pred CCCEEEECCCH--HHHHHHHH---HHHHCCCcEEEECc
Confidence 89999999993 33333332 33445665655443
No 297
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=97.20 E-value=0.00068 Score=70.65 Aligned_cols=98 Identities=12% Similarity=-0.028 Sum_probs=61.8
Q ss_pred CceeEEEEcCCCCcHH-HHHHHHH-CCCceE-EEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-
Q 004972 304 GVRKVAVIGGGLMGSG-IATAHIL-NNIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY- 379 (721)
Q Consensus 304 ~~~kI~VIG~G~mG~~-iA~~la~-~G~~V~-l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~- 379 (721)
++.||+|||+|.||.. ++..+.+ .+.+++ ++|+++++++...+.. + +...+++
T Consensus 5 ~~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~----------------------~-~~~~~~~~ 61 (308)
T 3uuw_A 5 KNIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTPNKVKREKICSDY----------------------R-IMPFDSIE 61 (308)
T ss_dssp CCCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECSCHHHHHHHHHHH----------------------T-CCBCSCHH
T ss_pred ccCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHc----------------------C-CCCcCCHH
Confidence 4568999999999997 8888876 467777 8999999877643211 1 1124455
Q ss_pred cccCCCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHH
Q 004972 380 SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428 (721)
Q Consensus 380 ~~l~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~~l 428 (721)
+.++++|+|++|+|.... .++.....+. ..-+++.-..+....+.
T Consensus 62 ~ll~~~D~V~i~tp~~~h--~~~~~~al~~--gk~vl~EKP~~~~~~~~ 106 (308)
T 3uuw_A 62 SLAKKCDCIFLHSSTETH--YEIIKILLNL--GVHVYVDKPLASTVSQG 106 (308)
T ss_dssp HHHTTCSEEEECCCGGGH--HHHHHHHHHT--TCEEEECSSSSSSHHHH
T ss_pred HHHhcCCEEEEeCCcHhH--HHHHHHHHHC--CCcEEEcCCCCCCHHHH
Confidence 445689999999995443 3443333322 12255443445555443
No 298
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=97.12 E-value=0.00081 Score=70.56 Aligned_cols=70 Identities=17% Similarity=0.045 Sum_probs=51.5
Q ss_pred eeEEEEcCCCCcHHHHHHHHH--CCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-ccc
Q 004972 306 RKVAVIGGGLMGSGIATAHIL--NNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 382 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~--~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l 382 (721)
++|+|||+|.||..++..++. ...+|.+||++++++++..+.+.. .+ + .+. .+++ +.+
T Consensus 126 ~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~~~~a~~la~~~~~-------~~-~----------~~~-~~~~~e~v 186 (322)
T 1omo_A 126 SVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCED-------RG-I----------SAS-VQPAEEAS 186 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHH-------TT-C----------CEE-ECCHHHHT
T ss_pred CEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHh-------cC-c----------eEE-ECCHHHHh
Confidence 589999999999999999887 346899999999998876443221 01 1 123 3444 567
Q ss_pred CCCCEEEEcccCC
Q 004972 383 KDVDMVIEAVIES 395 (721)
Q Consensus 383 ~~aDlVIeavpe~ 395 (721)
++|+||.|+|..
T Consensus 187 -~aDvVi~aTp~~ 198 (322)
T 1omo_A 187 -RCDVLVTTTPSR 198 (322)
T ss_dssp -SSSEEEECCCCS
T ss_pred -CCCEEEEeeCCC
Confidence 899999999843
No 299
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=97.12 E-value=0.0003 Score=75.75 Aligned_cols=86 Identities=19% Similarity=0.154 Sum_probs=60.4
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cccCC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 384 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 384 (721)
++|+|||.|.+|.++|..+...|.+|+++|+++.....+. ..| .... ++ +.+++
T Consensus 212 ktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~-----------~~G-------------~~~~-sL~eal~~ 266 (436)
T 3h9u_A 212 KTACVCGYGDVGKGCAAALRGFGARVVVTEVDPINALQAA-----------MEG-------------YQVL-LVEDVVEE 266 (436)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-----------HTT-------------CEEC-CHHHHTTT
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEECCChhhhHHHH-----------HhC-------------Ceec-CHHHHHhh
Confidence 5899999999999999999999999999999987654331 111 1222 34 66889
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecC
Q 004972 385 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 420 (721)
Q Consensus 385 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~t 420 (721)
||+||.+....--+. .+....++++++|+..+
T Consensus 267 ADVVilt~gt~~iI~----~e~l~~MK~gAIVINvg 298 (436)
T 3h9u_A 267 AHIFVTTTGNDDIIT----SEHFPRMRDDAIVCNIG 298 (436)
T ss_dssp CSEEEECSSCSCSBC----TTTGGGCCTTEEEEECS
T ss_pred CCEEEECCCCcCccC----HHHHhhcCCCcEEEEeC
Confidence 999998654222121 23345578999887544
No 300
>3n6r_B Propionyl-COA carboxylase, beta subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Roseobacter denitrificans}
Probab=97.09 E-value=0.0081 Score=66.43 Aligned_cols=138 Identities=12% Similarity=0.096 Sum_probs=91.1
Q ss_pred CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccCCCcccccchHHHHHHHH-HHhhCCCcEEE
Q 004972 25 VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVN-LIEDCKKPIVA 103 (721)
Q Consensus 25 ~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~p~Ia 103 (721)
.-++.....+.+..+++.+.+. .+-+|.|.-. .|+.+.+-. ..+... .+.+.+ ....-..|+|+
T Consensus 118 gGS~g~~~~~Ki~ra~e~A~~~-~lPvI~l~dS-----GGARmqeg~--------~sl~~~-~~i~~~~~~~s~~iP~Is 182 (531)
T 3n6r_B 118 GGSVSETHSKKICKIMDMAMQN-GAPVIGINDS-----GGARIQEGV--------DSLAGY-GEVFQRNIMASGVVPQIS 182 (531)
T ss_dssp GGCBCHHHHHHHHHHHHHHHHH-TCCEEEEECC-----CCBCGGGTH--------HHHHHH-HHHHHHHHHTTTTSCEEE
T ss_pred cccccHHHHHHHHHHHHHHHHc-CCCEEEEeCC-----CccccCccc--------chhhhH-HHHHHHHHHHhCCCCEEE
Confidence 4789999999999999988765 3456666643 344443310 001111 122211 11224589999
Q ss_pred EECCcccccchHhhhhcCEEEeeCC-ceEeCcccccCccccccccccccCHHHHHHHHHcCCCcCHHHH-------HHcC
Q 004972 104 AVEGLALGGGLELAMGCHARIAAPK-TQLGLPELTLGVIPGTQRLPRLVGLSKAIEMMLLSKSITSEEG-------WKLG 175 (721)
Q Consensus 104 av~G~a~GgG~~lalacD~ria~~~-a~~~~pe~~~Gl~P~~~~l~r~~G~~~a~~l~ltg~~~~a~eA-------~~~G 175 (721)
+|.|.|.|||......||++|+.++ +.+++. |+.... ..+|+.+++++. .+.|
T Consensus 183 vv~Gp~~GG~a~s~a~~D~vi~~~~~a~i~~a-----------------GP~vI~--~~~ge~v~~E~LGGa~~h~~~sG 243 (531)
T 3n6r_B 183 MIMGPCAGGAVYSPAMTDFIFMVKDSSYMFVT-----------------GPDVVK--TVTNEQVSAEELGGATTHTRKSS 243 (531)
T ss_dssp EECSCCBGGGGHHHHHSSEEEEETTTCBCBSS-----------------CHHHHH--HHHCCCCCHHHHHBHHHHHHTTS
T ss_pred EEeCCcchHHHHHhhhCCEEEEecCCceEeec-----------------CHHHHH--HHhCCccChhhcchHHHHhhccC
Confidence 9999999999887778999999975 776653 333222 257899999998 8899
Q ss_pred CccEEcCCchHHHHHHHHHHHHHh
Q 004972 176 LIDAVVTSEELLKVSRLWALDIAA 199 (721)
Q Consensus 176 lv~~vv~~~~l~~~a~~~a~~~a~ 199 (721)
++|.++++|+ ++.+.++++.+
T Consensus 244 ~~d~v~~~e~---~a~~~~r~lls 264 (531)
T 3n6r_B 244 VADAAFENDV---EALAEVRRLVD 264 (531)
T ss_dssp CCSEEESSHH---HHHHHHHHHHT
T ss_pred cceEEeCCHH---HHHHHHHHHHH
Confidence 9999998743 34444444443
No 301
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=97.08 E-value=0.00046 Score=72.02 Aligned_cols=91 Identities=13% Similarity=0.134 Sum_probs=59.7
Q ss_pred eeEEEEcCCCCcHHHHHHHHHC--CCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-ccc
Q 004972 306 RKVAVIGGGLMGSGIATAHILN--NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 382 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~--G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l 382 (721)
++|+|||+|.||..++..+... ..+|++||++ +.++..+++...+ | -.+... +. +.+
T Consensus 122 ~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~--~a~~la~~l~~~~------g-----------~~~~~~-~~~eav 181 (313)
T 3hdj_A 122 SVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY--ASPEILERIGRRC------G-----------VPARMA-APADIA 181 (313)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT--CCHHHHHHHHHHH------T-----------SCEEEC-CHHHHH
T ss_pred cEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc--HHHHHHHHHHHhc------C-----------CeEEEe-CHHHHH
Confidence 5899999999999999998763 4589999999 4333322222110 1 012333 54 567
Q ss_pred CCCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCC
Q 004972 383 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 422 (721)
Q Consensus 383 ~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~ 422 (721)
++||+||.|+|... .++. .+.++++++|.+.+|.
T Consensus 182 ~~aDIVi~aT~s~~----pvl~--~~~l~~G~~V~~vGs~ 215 (313)
T 3hdj_A 182 AQADIVVTATRSTT----PLFA--GQALRAGAFVGAIGSS 215 (313)
T ss_dssp HHCSEEEECCCCSS----CSSC--GGGCCTTCEEEECCCS
T ss_pred hhCCEEEEccCCCC----cccC--HHHcCCCcEEEECCCC
Confidence 89999999998532 2222 3457788877765554
No 302
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=97.07 E-value=0.0012 Score=69.09 Aligned_cols=97 Identities=10% Similarity=0.016 Sum_probs=59.3
Q ss_pred CCceeEEEEcCCCCcHH-HHHHHHH-CCCceE-EEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc
Q 004972 303 RGVRKVAVIGGGLMGSG-IATAHIL-NNIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 379 (721)
Q Consensus 303 ~~~~kI~VIG~G~mG~~-iA~~la~-~G~~V~-l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~ 379 (721)
|+..||+|||+|.||.. ++..+.+ .+++|+ ++|+++++++...+.. | +...+++
T Consensus 3 m~~~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~----------g-------------~~~~~~~ 59 (319)
T 1tlt_A 3 LKKLRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESW----------R-------------IPYADSL 59 (319)
T ss_dssp --CEEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHH----------T-------------CCBCSSH
T ss_pred CCcceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHc----------C-------------CCccCcH
Confidence 44568999999999997 8888876 477776 9999998766532210 1 1133444
Q ss_pred ccc-CCCCEEEEcccCChHHHHHHHHHHHhhCCCCe-EEEecCCCCCHHH
Q 004972 380 SEF-KDVDMVIEAVIESVPLKQKIFSELEKACPPHC-ILATNTSTIDLNI 427 (721)
Q Consensus 380 ~~l-~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~-ii~s~ts~~~i~~ 427 (721)
+.+ .++|+|++|+|..... ++.... +..+. +++....+....+
T Consensus 60 ~~l~~~~D~V~i~tp~~~h~--~~~~~a---l~~G~~v~~eKP~~~~~~~ 104 (319)
T 1tlt_A 60 SSLAASCDAVFVHSSTASHF--DVVSTL---LNAGVHVCVDKPLAENLRD 104 (319)
T ss_dssp HHHHTTCSEEEECSCTTHHH--HHHHHH---HHTTCEEEEESSSCSSHHH
T ss_pred HHhhcCCCEEEEeCCchhHH--HHHHHH---HHcCCeEEEeCCCCCCHHH
Confidence 433 6799999999955432 333332 22343 4544344455544
No 303
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=97.07 E-value=0.00018 Score=72.65 Aligned_cols=37 Identities=16% Similarity=0.144 Sum_probs=34.3
Q ss_pred eEEEEcCCCCcHHHHHHHHHCCC-ceEEEeCCHHHHHH
Q 004972 307 KVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLK 343 (721)
Q Consensus 307 kI~VIG~G~mG~~iA~~la~~G~-~V~l~d~~~~~~~~ 343 (721)
+|+|||+|.||.+++..|++.|. +|+++||++++++.
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~ 147 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTIERAKA 147 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCHHHHHT
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH
Confidence 79999999999999999999998 99999999987554
No 304
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=97.06 E-value=0.0021 Score=67.41 Aligned_cols=95 Identities=13% Similarity=0.042 Sum_probs=60.2
Q ss_pred eeEEEEcCCCCcHHHHHHHHHC-CCce-EEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCcc-cc
Q 004972 306 RKVAVIGGGLMGSGIATAHILN-NIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS-EF 382 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~-G~~V-~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~-~l 382 (721)
.||+|||+|.||..++..+.+. ++++ .++|+++++++... + ..+.....++++ .+
T Consensus 2 ~~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d~~~~~~~~~~-----------~-----------~~~~~~~~~~~~~~l 59 (325)
T 2ho3_A 2 LKLGVIGTGAISHHFIEAAHTSGEYQLVAIYSRKLETAATFA-----------S-----------RYQNIQLFDQLEVFF 59 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTSEEEEEEECSSHHHHHHHG-----------G-----------GSSSCEEESCHHHHH
T ss_pred eEEEEEeCCHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHH-----------H-----------HcCCCeEeCCHHHHh
Confidence 5899999999999999999876 5665 48999998765431 1 111223455663 45
Q ss_pred -CCCCEEEEcccCChHHHHHHHHHHHhhCCCCe-EEEecCCCCCHHH
Q 004972 383 -KDVDMVIEAVIESVPLKQKIFSELEKACPPHC-ILATNTSTIDLNI 427 (721)
Q Consensus 383 -~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~-ii~s~ts~~~i~~ 427 (721)
.++|+|++|+|.... .++..+.. ..+. +++....+....+
T Consensus 60 ~~~~D~V~i~tp~~~h--~~~~~~al---~~gk~V~~EKP~~~~~~~ 101 (325)
T 2ho3_A 60 KSSFDLVYIASPNSLH--FAQAKAAL---SAGKHVILEKPAVSQPQE 101 (325)
T ss_dssp TSSCSEEEECSCGGGH--HHHHHHHH---HTTCEEEEESSCCSSHHH
T ss_pred CCCCCEEEEeCChHHH--HHHHHHHH---HcCCcEEEecCCcCCHHH
Confidence 689999999994432 33333332 2333 4544334455543
No 305
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=97.02 E-value=0.00029 Score=74.85 Aligned_cols=104 Identities=12% Similarity=0.088 Sum_probs=63.8
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhh--------cCC---CCHHHHHHhhcCce
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT--------RGK---LTQDKANNALKMLK 374 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~--------~g~---~~~~~~~~~~~~i~ 374 (721)
.||+|||+|.||..+|+.+...|.+|+++|+++++++.+.+. . ...+. .+. ++.+....
T Consensus 185 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~l-G---a~~~~l~~~~~~~~gya~~~~~~~~~~------ 254 (381)
T 3p2y_A 185 ASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQVRSV-G---AQWLDLGIDAAGEGGYARELSEAERAQ------ 254 (381)
T ss_dssp CEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHT-T---CEECCCC-------------CHHHHHH------
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc-C---CeEEeccccccccccchhhhhHHHHhh------
Confidence 689999999999999999999999999999999987765320 0 00000 000 01110000
Q ss_pred eccCc-cccCCCCEEEEcc--cCChHHHHHHHHHHHhhCCCCeEEEecC
Q 004972 375 GVLDY-SEFKDVDMVIEAV--IESVPLKQKIFSELEKACPPHCILATNT 420 (721)
Q Consensus 375 ~~~~~-~~l~~aDlVIeav--pe~~~~k~~v~~~l~~~~~~~~ii~s~t 420 (721)
...++ +.+++||+||.++ |....- .-+-++..+.++++.+|++.+
T Consensus 255 ~~~~l~e~l~~aDIVI~tv~iPg~~ap-~Lvt~emv~~MkpGsVIVDvA 302 (381)
T 3p2y_A 255 QQQALEDAITKFDIVITTALVPGRPAP-RLVTAAAATGMQPGSVVVDLA 302 (381)
T ss_dssp HHHHHHHHHTTCSEEEECCCCTTSCCC-CCBCHHHHHTSCTTCEEEETT
T ss_pred hHHHHHHHHhcCCEEEECCCCCCcccc-eeecHHHHhcCCCCcEEEEEe
Confidence 01122 5679999999986 421110 001244555678899888654
No 306
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=97.01 E-value=0.0024 Score=58.93 Aligned_cols=38 Identities=8% Similarity=0.010 Sum_probs=33.6
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCC-HHHHHH
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVN-SEYLLK 343 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~-~~~~~~ 343 (721)
++|.|+|+|.+|..++..|.+.|++|+++|++ ++..+.
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~ 42 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQ 42 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCCEEEEECCChHHHHH
Confidence 57999999999999999999999999999998 455443
No 307
>2f9i_B Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; zinc ribbon, crotonase superfamily, spiral domain; 1.98A {Staphylococcus aureus}
Probab=97.00 E-value=0.018 Score=58.73 Aligned_cols=151 Identities=14% Similarity=0.165 Sum_probs=93.8
Q ss_pred EEEEEeCCCC--CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccCCCcccccc--hHHHHHH
Q 004972 15 VAIITLINPP--VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMP--DVSVELV 90 (721)
Q Consensus 15 v~~i~l~~p~--~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~--~~~~~~~ 90 (721)
|+++ -|++. .-+++....+.+.++++.+.+.. +-+|.|.-.|++ -+.+ . ...+. ......+
T Consensus 123 V~v~-a~d~~~~gGs~g~~~~~K~~r~ie~A~~~~-lPlI~l~dsgGa-----r~qE-------G-i~sl~q~aki~~~l 187 (285)
T 2f9i_B 123 FGVA-VMDSRFRMGSMGSVIGEKICRIIDYCTENR-LPFILFSASGGA-----RMQE-------G-IISLMQMGKTSVSL 187 (285)
T ss_dssp EEEE-EECTTTGGGCCCHHHHHHHHHHHHHHHHTT-CCEEEEEEECSC-----CGGG-------H-HHHHHHHHHHHHHH
T ss_pred EEEE-EEccccccCcCCHHHHHHHHHHHHHHHHcC-CCEEEEEeCCCc-----chhh-------h-hhhHhHHHHHHHHH
Confidence 4444 34443 37899999999999999888654 556666543332 2221 0 10000 1111233
Q ss_pred HHHHhhCCCcEEEEECCcccccchHh-hhhcCEEEeeCCceEeCcccccCccccccccccccCHHHHHHHHHcCCCcCHH
Q 004972 91 VNLIEDCKKPIVAAVEGLALGGGLEL-AMGCHARIAAPKTQLGLPELTLGVIPGTQRLPRLVGLSKAIEMMLLSKSITSE 169 (721)
Q Consensus 91 ~~~l~~~~~p~Iaav~G~a~GgG~~l-alacD~ria~~~a~~~~pe~~~Gl~P~~~~l~r~~G~~~a~~l~ltg~~~~a~ 169 (721)
.++.....|.|+++.|.|+||+... ++.+|+++|.++|.+++-.... + .+.+-+.+. -..-+|+
T Consensus 188 -~~~s~~~vP~Isvv~g~~~GG~~as~a~~~D~i~a~p~A~i~~aGP~v--i--~~~~~~~~~----------e~~~~Ae 252 (285)
T 2f9i_B 188 -KRHSDAGLLYISYLTHPTTGGVSASFASVGDINLSEPKALIGFAGRRV--I--EQTINEKLP----------DDFQTAE 252 (285)
T ss_dssp -HHHHHTTCCEEEEEEEEEEHHHHTTGGGCCSEEEECTTCBEESSCHHH--H--HHHHTSCCC----------TTTTBHH
T ss_pred -HHHHcCCCCEEEEEeCCccHHHHHHhhhCCCEEEEeCCcEEEEcCHHH--H--HHHhcccch----------HhHhhHH
Confidence 3466789999999999999998644 8899999999999888742110 0 111111111 0112477
Q ss_pred HHHHcCCccEEcCCchHHHHHHHHHH
Q 004972 170 EGWKLGLIDAVVTSEELLKVSRLWAL 195 (721)
Q Consensus 170 eA~~~Glv~~vv~~~~l~~~a~~~a~ 195 (721)
-+.+.|+||.|++++++.+....+..
T Consensus 253 ~~~~~G~iD~Iv~~~e~r~~l~~~L~ 278 (285)
T 2f9i_B 253 FLLEHGQLDKVVHRNDMRQTLSEILK 278 (285)
T ss_dssp HHHHTTCCSEECCGGGHHHHHHHHHH
T ss_pred HHHhcCCccEEeChHHHHHHHHHHHH
Confidence 78899999999998877666555543
No 308
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=97.00 E-value=0.0021 Score=67.60 Aligned_cols=96 Identities=16% Similarity=0.155 Sum_probs=61.7
Q ss_pred ceeEEEEcCCCCcHHHHHHHHHC-CCceE-EEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cc
Q 004972 305 VRKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SE 381 (721)
Q Consensus 305 ~~kI~VIG~G~mG~~iA~~la~~-G~~V~-l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~ 381 (721)
+.||+|||+|.||..++..+.+. +++|+ ++|+++++++...+. . .+. .+++ +.
T Consensus 3 ~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~----------------------~-~~~-~~~~~~~ 58 (331)
T 4hkt_A 3 TVRFGLLGAGRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAGA----------------------Y-GCE-VRTIDAI 58 (331)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHH----------------------T-TCE-ECCHHHH
T ss_pred ceEEEEECCCHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHH----------------------h-CCC-cCCHHHH
Confidence 36899999999999999999885 77876 799999886654221 0 123 4455 33
Q ss_pred cC--CCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHH
Q 004972 382 FK--DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428 (721)
Q Consensus 382 l~--~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~~l 428 (721)
++ ++|+|++|+|.... .++.....+. ...+++....+....+.
T Consensus 59 l~~~~~D~V~i~tp~~~h--~~~~~~al~~--gk~v~~EKP~~~~~~~~ 103 (331)
T 4hkt_A 59 EAAADIDAVVICTPTDTH--ADLIERFARA--GKAIFCEKPIDLDAERV 103 (331)
T ss_dssp HHCTTCCEEEECSCGGGH--HHHHHHHHHT--TCEEEECSCSCSSHHHH
T ss_pred hcCCCCCEEEEeCCchhH--HHHHHHHHHc--CCcEEEecCCCCCHHHH
Confidence 44 79999999995443 2333333222 22355544445555543
No 309
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=97.00 E-value=0.0023 Score=67.02 Aligned_cols=95 Identities=15% Similarity=0.022 Sum_probs=58.9
Q ss_pred eeEEEEcCCCCcH-HHHHHHHHC-CCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCce-eccCcccc
Q 004972 306 RKVAVIGGGLMGS-GIATAHILN-NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLK-GVLDYSEF 382 (721)
Q Consensus 306 ~kI~VIG~G~mG~-~iA~~la~~-G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~-~~~~~~~l 382 (721)
.||+|||+|.||. .++..+.+. +.+|+++|+++++++...+. -| .-. .++..+.+
T Consensus 3 ~~igiIG~G~ig~~~~~~~l~~~~~~~l~v~d~~~~~~~~~a~~----------~g------------~~~~~~~~~~~l 60 (323)
T 1xea_A 3 LKIAMIGLGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATR----------YR------------VSATCTDYRDVL 60 (323)
T ss_dssp EEEEEECCCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHH----------TT------------CCCCCSSTTGGG
T ss_pred cEEEEECCCHHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHH----------cC------------CCccccCHHHHh
Confidence 5899999999998 488888764 67888999999887654221 01 001 23333555
Q ss_pred -CCCCEEEEcccCChHHHHHHHHHHHhhCCCCe-EEEecCCCCCHHH
Q 004972 383 -KDVDMVIEAVIESVPLKQKIFSELEKACPPHC-ILATNTSTIDLNI 427 (721)
Q Consensus 383 -~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~-ii~s~ts~~~i~~ 427 (721)
.++|+|++|+|... -.++..+..+ .+. +++....+....+
T Consensus 61 ~~~~D~V~i~tp~~~--h~~~~~~al~---~Gk~V~~EKP~~~~~~~ 102 (323)
T 1xea_A 61 QYGVDAVMIHAATDV--HSTLAAFFLH---LGIPTFVDKPLAASAQE 102 (323)
T ss_dssp GGCCSEEEECSCGGG--HHHHHHHHHH---TTCCEEEESCSCSSHHH
T ss_pred hcCCCEEEEECCchh--HHHHHHHHHH---CCCeEEEeCCCcCCHHH
Confidence 68999999999433 3333333222 232 4544444455443
No 310
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=96.97 E-value=0.002 Score=69.30 Aligned_cols=87 Identities=21% Similarity=0.291 Sum_probs=60.2
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cccCC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 384 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 384 (721)
++|+|+|+|.+|..+|..+...|.+|+++|+++.....+. ..| ... .++ +.++.
T Consensus 221 ktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~-----------~~G-------------~~v-~~Leeal~~ 275 (435)
T 3gvp_A 221 KQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDPICALQAC-----------MDG-------------FRL-VKLNEVIRQ 275 (435)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-----------HTT-------------CEE-CCHHHHTTT
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCChhhhHHHH-----------HcC-------------CEe-ccHHHHHhc
Confidence 5899999999999999999999999999999987644321 111 111 223 56789
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCC
Q 004972 385 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 421 (721)
Q Consensus 385 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts 421 (721)
||+||.| ++...+.. .+....++++++|+..+.
T Consensus 276 ADIVi~a-tgt~~lI~---~e~l~~MK~gailINvgr 308 (435)
T 3gvp_A 276 VDIVITC-TGNKNVVT---REHLDRMKNSCIVCNMGH 308 (435)
T ss_dssp CSEEEEC-SSCSCSBC---HHHHHHSCTTEEEEECSS
T ss_pred CCEEEEC-CCCcccCC---HHHHHhcCCCcEEEEecC
Confidence 9999997 43333211 233445788888865443
No 311
>3iav_A Propionyl-COA carboxylase complex B subunit; accase, pccase, ACC, PCC, CT, carboxyltransfe polyketide, fatty acid, PKS, FAS; 1.75A {Streptomyces coelicolor} PDB: 1xnw_A 3ib9_A* 3ibb_A 3mfm_C 1xny_A* 1xnv_A* 1xo6_A
Probab=96.97 E-value=0.014 Score=64.55 Aligned_cols=138 Identities=13% Similarity=0.094 Sum_probs=92.1
Q ss_pred CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccCCCcccccchHHHHHHHH--HHhhCCCcEE
Q 004972 25 VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVN--LIEDCKKPIV 102 (721)
Q Consensus 25 ~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~~~~p~I 102 (721)
.-++.....+.+..+++.+.+. .+-+|.|.-.| |+-+.+= ...+.. +...+.+ .+.. ..|+|
T Consensus 110 gGS~g~~~~~Ki~ra~e~A~~~-~lP~I~l~dSg-----GaRmqEg--------~~~l~~-~~~i~~~~~~~s~-~iP~I 173 (530)
T 3iav_A 110 GGALGEVYGQKIVKVMDFALKT-GCPVVGINDSG-----GARIQEG--------VASLGA-YGEIFRRNTHASG-VIPQI 173 (530)
T ss_dssp GGCBCHHHHHHHHHHHHHHHHH-TCCEEEEECCC-----SBCGGGT--------HHHHHH-HHHHHHHHHHTTT-TSCEE
T ss_pred eEeccHHHHHHHHHHHHHHHHc-CCCEEEEEcCC-----Ccchhhh--------hhhHHH-HHHHHHHHHHHcC-CCCEE
Confidence 4889999999999999888765 45567676533 4434321 111111 1122211 1222 49999
Q ss_pred EEECCcccccchHhhhhcCEEEeeCC-ceEeCcccccCccccccccccccCHHHHHHHHHcCCCcCHHHH-------HHc
Q 004972 103 AAVEGLALGGGLELAMGCHARIAAPK-TQLGLPELTLGVIPGTQRLPRLVGLSKAIEMMLLSKSITSEEG-------WKL 174 (721)
Q Consensus 103 aav~G~a~GgG~~lalacD~ria~~~-a~~~~pe~~~Gl~P~~~~l~r~~G~~~a~~l~ltg~~~~a~eA-------~~~ 174 (721)
++|.|.|.|||......||++|++++ +.+++. |+.... ..+|+.+++++. ...
T Consensus 174 svv~G~~~GG~a~~~al~D~~im~~~~a~i~~a-----------------GP~vi~--~~~ge~v~~e~LGGa~~h~~~s 234 (530)
T 3iav_A 174 SLVVGPCAGGAVYSPAITDFTVMVDQTSHMFIT-----------------GPDVIK--TVTGEDVGFEELGGARTHNSTS 234 (530)
T ss_dssp EEECSEEEGGGGHHHHHSSEEEEETTTCEEESS-----------------CHHHHH--HHHCCCCCHHHHHBHHHHHHTS
T ss_pred EEEecCcchHHHHHHHhCCEEEEecCCcEEEec-----------------CHHHHH--HHhCCcCChhhcchHHHHHhcc
Confidence 99999999999988889999999875 888874 333222 157899998875 579
Q ss_pred CCccEEcCCc-hHHHHHHHHHHHH
Q 004972 175 GLIDAVVTSE-ELLKVSRLWALDI 197 (721)
Q Consensus 175 Glv~~vv~~~-~l~~~a~~~a~~~ 197 (721)
|++|.+++++ +..+.++++...+
T Consensus 235 Gv~d~va~de~~a~~~~r~~ls~l 258 (530)
T 3iav_A 235 GVAHHMAGDEKDAVEYVKQLLSYL 258 (530)
T ss_dssp CCCSEEESSHHHHHHHHHHHHHHS
T ss_pred CceeEEecChHHHHHHHHHHHHhc
Confidence 9999999765 3555555555443
No 312
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=96.96 E-value=0.00036 Score=74.79 Aligned_cols=39 Identities=18% Similarity=0.143 Sum_probs=36.4
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHH
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKG 344 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~ 344 (721)
.||+|||+|.||..+|+.+...|.+|+++|+++++++.+
T Consensus 191 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~ 229 (405)
T 4dio_A 191 AKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQV 229 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHH
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence 589999999999999999999999999999999887765
No 313
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=96.95 E-value=0.002 Score=68.20 Aligned_cols=97 Identities=19% Similarity=0.224 Sum_probs=61.1
Q ss_pred eeEEEEcCCCCcHHHHHHHHHC-CCceE-EEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-ccc
Q 004972 306 RKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 382 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~-G~~V~-l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l 382 (721)
.||+|||+|.||..++..+.+. +.+|+ ++|+++++++...+. .+.....+++ +.+
T Consensus 3 ~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~----------------------~~~~~~~~~~~~ll 60 (344)
T 3ezy_A 3 LRIGVIGLGRIGTIHAENLKMIDDAILYAISDVREDRLREMKEK----------------------LGVEKAYKDPHELI 60 (344)
T ss_dssp EEEEEECCSHHHHHHHHHGGGSTTEEEEEEECSCHHHHHHHHHH----------------------HTCSEEESSHHHHH
T ss_pred eEEEEEcCCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHH----------------------hCCCceeCCHHHHh
Confidence 5899999999999999998875 67766 799999887654321 1112345565 334
Q ss_pred C--CCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHH
Q 004972 383 K--DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428 (721)
Q Consensus 383 ~--~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~~l 428 (721)
+ ++|+|++|+|.... .++..+..+. ..-+++.-.-+....+.
T Consensus 61 ~~~~~D~V~i~tp~~~h--~~~~~~al~~--gk~v~~EKP~~~~~~e~ 104 (344)
T 3ezy_A 61 EDPNVDAVLVCSSTNTH--SELVIACAKA--KKHVFCEKPLSLNLADV 104 (344)
T ss_dssp HCTTCCEEEECSCGGGH--HHHHHHHHHT--TCEEEEESCSCSCHHHH
T ss_pred cCCCCCEEEEcCCCcch--HHHHHHHHhc--CCeEEEECCCCCCHHHH
Confidence 4 79999999995433 2333333221 22355544445555443
No 314
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=96.94 E-value=0.0037 Score=66.07 Aligned_cols=71 Identities=15% Similarity=0.192 Sum_probs=49.6
Q ss_pred CceeEEEEcCCCCcHHHHHHHH-H-CCCce-EEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-
Q 004972 304 GVRKVAVIGGGLMGSGIATAHI-L-NNIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY- 379 (721)
Q Consensus 304 ~~~kI~VIG~G~mG~~iA~~la-~-~G~~V-~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~- 379 (721)
++.||+|||+|.||..++..+. + .|++| .++|+++++++...+ . .+.....+++
T Consensus 7 ~~~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~-----------~-----------~g~~~~~~~~~ 64 (346)
T 3cea_A 7 KPLRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKN-----------E-----------LGVETTYTNYK 64 (346)
T ss_dssp CCEEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHH-----------T-----------TCCSEEESCHH
T ss_pred CcceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHH-----------H-----------hCCCcccCCHH
Confidence 4568999999999999999988 4 46775 589999988665321 1 1111334555
Q ss_pred cccC--CCCEEEEcccCCh
Q 004972 380 SEFK--DVDMVIEAVIESV 396 (721)
Q Consensus 380 ~~l~--~aDlVIeavpe~~ 396 (721)
+.++ ++|+|++|+|...
T Consensus 65 ~~l~~~~~D~V~i~tp~~~ 83 (346)
T 3cea_A 65 DMIDTENIDAIFIVAPTPF 83 (346)
T ss_dssp HHHTTSCCSEEEECSCGGG
T ss_pred HHhcCCCCCEEEEeCChHh
Confidence 3343 6999999999444
No 315
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=96.94 E-value=0.0026 Score=67.53 Aligned_cols=100 Identities=17% Similarity=0.063 Sum_probs=61.5
Q ss_pred CCCceeEEEEcCCCCcH-HHHHHHHHC-CCceE-EEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccC
Q 004972 302 PRGVRKVAVIGGGLMGS-GIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLD 378 (721)
Q Consensus 302 ~~~~~kI~VIG~G~mG~-~iA~~la~~-G~~V~-l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~ 378 (721)
+|+..||+|||+|.||. .++..+.+. +++|+ ++|+++++++...+. . .+...++
T Consensus 24 ~m~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~----------------------~-g~~~~~~ 80 (350)
T 3rc1_A 24 NANPIRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTER----------------------F-GGEPVEG 80 (350)
T ss_dssp --CCEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHH----------------------H-CSEEEES
T ss_pred CCCceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHH----------------------c-CCCCcCC
Confidence 45557899999999998 788888877 77775 889999886654221 0 1233356
Q ss_pred cc-ccC--CCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHH
Q 004972 379 YS-EFK--DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428 (721)
Q Consensus 379 ~~-~l~--~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~~l 428 (721)
++ .++ ++|+|++|+|..... ++.....+. ..-+++--.-+....+.
T Consensus 81 ~~~ll~~~~~D~V~i~tp~~~h~--~~~~~al~a--Gk~Vl~EKP~a~~~~ea 129 (350)
T 3rc1_A 81 YPALLERDDVDAVYVPLPAVLHA--EWIDRALRA--GKHVLAEKPLTTDRPQA 129 (350)
T ss_dssp HHHHHTCTTCSEEEECCCGGGHH--HHHHHHHHT--TCEEEEESSSCSSHHHH
T ss_pred HHHHhcCCCCCEEEECCCcHHHH--HHHHHHHHC--CCcEEEeCCCCCCHHHH
Confidence 53 343 689999999955443 333333221 12255544444555443
No 316
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=96.92 E-value=0.00047 Score=72.52 Aligned_cols=101 Identities=18% Similarity=0.132 Sum_probs=65.2
Q ss_pred eeEEEEc-CCCCcHHHHHHHHHCCC--c-----eEEEeCCH--HHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCcee
Q 004972 306 RKVAVIG-GGLMGSGIATAHILNNI--Y-----VVLKEVNS--EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG 375 (721)
Q Consensus 306 ~kI~VIG-~G~mG~~iA~~la~~G~--~-----V~l~d~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 375 (721)
.||+|+| +|.+|+++|..|+..|+ + ++++|+++ +.++.....+.+ .... ....+..
T Consensus 4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~--------~~~~------~~~~~~~ 69 (333)
T 5mdh_A 4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQD--------CALP------LLKDVIA 69 (333)
T ss_dssp EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHH--------TCCT------TEEEEEE
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHh--------hhhc------ccCCEEE
Confidence 5899999 79999999999999886 6 99999975 233322111111 0000 1123444
Q ss_pred ccC-ccccCCCCEEEEcc--cC------------ChHHHHHHHHHHHhhCCCCeEEEecC
Q 004972 376 VLD-YSEFKDVDMVIEAV--IE------------SVPLKQKIFSELEKACPPHCILATNT 420 (721)
Q Consensus 376 ~~~-~~~l~~aDlVIeav--pe------------~~~~k~~v~~~l~~~~~~~~ii~s~t 420 (721)
+++ ++++++||+||.+. |. +..+.+.+...+.++.+++.+++..|
T Consensus 70 ~~~~~~~~~daDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvs 129 (333)
T 5mdh_A 70 TDKEEIAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVG 129 (333)
T ss_dssp ESCHHHHTTTCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred cCCcHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcC
Confidence 444 47899999999875 21 34566777778888887765344333
No 317
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=96.90 E-value=0.0014 Score=70.62 Aligned_cols=87 Identities=20% Similarity=0.243 Sum_probs=60.5
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cccCC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 384 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 384 (721)
++|+|||.|.+|..+|+.+...|.+|+++|+++.....+. ..| .... ++ +.++.
T Consensus 248 KTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~-----------~~G-------------~~vv-~LeElL~~ 302 (464)
T 3n58_A 248 KVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICALQAA-----------MDG-------------FEVV-TLDDAAST 302 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHH-----------HTT-------------CEEC-CHHHHGGG
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCcchhhHHH-----------hcC-------------ceec-cHHHHHhh
Confidence 5899999999999999999999999999999987643321 111 1211 23 56789
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCC
Q 004972 385 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 422 (721)
Q Consensus 385 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~ 422 (721)
||+|+.+....--+. .+....++++++|+ |++.
T Consensus 303 ADIVv~atgt~~lI~----~e~l~~MK~GAILI-NvGR 335 (464)
T 3n58_A 303 ADIVVTTTGNKDVIT----IDHMRKMKDMCIVG-NIGH 335 (464)
T ss_dssp CSEEEECCSSSSSBC----HHHHHHSCTTEEEE-ECSS
T ss_pred CCEEEECCCCccccC----HHHHhcCCCCeEEE-EcCC
Confidence 999999864322222 33445578999886 4543
No 318
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=96.89 E-value=0.0023 Score=68.10 Aligned_cols=97 Identities=20% Similarity=0.141 Sum_probs=62.0
Q ss_pred ceeEEEEcCCCCcHHHHHHHHHC-CCceE-EEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cc
Q 004972 305 VRKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SE 381 (721)
Q Consensus 305 ~~kI~VIG~G~mG~~iA~~la~~-G~~V~-l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~ 381 (721)
..||+|||+|.||..++..+.+. +++|+ ++|+++++++...+.. .+...+++ +.
T Consensus 5 ~~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~-----------------------g~~~~~~~~~~ 61 (354)
T 3db2_A 5 PVGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRY-----------------------NCAGDATMEAL 61 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHHH-----------------------TCCCCSSHHHH
T ss_pred cceEEEEccCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHc-----------------------CCCCcCCHHHH
Confidence 35899999999999999999876 77865 8999999876643210 12224555 33
Q ss_pred c--CCCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHH
Q 004972 382 F--KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428 (721)
Q Consensus 382 l--~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~~l 428 (721)
+ .++|+|++|+|..... ++..+..+. ..-+++....+....+.
T Consensus 62 l~~~~~D~V~i~tp~~~h~--~~~~~al~~--gk~vl~EKP~~~~~~~~ 106 (354)
T 3db2_A 62 LAREDVEMVIITVPNDKHA--EVIEQCARS--GKHIYVEKPISVSLDHA 106 (354)
T ss_dssp HHCSSCCEEEECSCTTSHH--HHHHHHHHT--TCEEEEESSSCSSHHHH
T ss_pred hcCCCCCEEEEeCChHHHH--HHHHHHHHc--CCEEEEccCCCCCHHHH
Confidence 4 5799999999965543 333332221 22355554445555443
No 319
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=96.88 E-value=0.002 Score=67.26 Aligned_cols=93 Identities=20% Similarity=0.122 Sum_probs=59.3
Q ss_pred ceeEEEEcCCCCcHHHHHHHHHC-CCce-EEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cc
Q 004972 305 VRKVAVIGGGLMGSGIATAHILN-NIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SE 381 (721)
Q Consensus 305 ~~kI~VIG~G~mG~~iA~~la~~-G~~V-~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~ 381 (721)
..||+|||+|.||..++..+.+. ++++ .++|+++++++... + .+...+++ +.
T Consensus 10 ~~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d~~~~~~~~~~-----------~--------------~~~~~~~~~~~ 64 (315)
T 3c1a_A 10 PVRLALIGAGRWGKNYIRTIAGLPGAALVRLASSNPDNLALVP-----------P--------------GCVIESDWRSV 64 (315)
T ss_dssp CEEEEEEECTTTTTTHHHHHHHCTTEEEEEEEESCHHHHTTCC-----------T--------------TCEEESSTHHH
T ss_pred cceEEEECCcHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHH-----------h--------------hCcccCCHHHH
Confidence 46899999999999999999885 6665 59999988754321 0 12334555 33
Q ss_pred cC--CCCEEEEcccCChHHHHHHHHHHHhhCCCCe-EEEecCCCCCHHH
Q 004972 382 FK--DVDMVIEAVIESVPLKQKIFSELEKACPPHC-ILATNTSTIDLNI 427 (721)
Q Consensus 382 l~--~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~-ii~s~ts~~~i~~ 427 (721)
++ ++|+|++|+|.... .++..+. ++.+. +++....+....+
T Consensus 65 l~~~~~D~V~i~tp~~~h--~~~~~~a---l~~Gk~v~~eKP~~~~~~~ 108 (315)
T 3c1a_A 65 VSAPEVEAVIIATPPATH--AEITLAA---IASGKAVLVEKPLTLDLAE 108 (315)
T ss_dssp HTCTTCCEEEEESCGGGH--HHHHHHH---HHTTCEEEEESSSCSCHHH
T ss_pred hhCCCCCEEEEeCChHHH--HHHHHHH---HHCCCcEEEcCCCcCCHHH
Confidence 43 79999999994433 3443333 22333 4544444555543
No 320
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=96.87 E-value=0.00088 Score=69.44 Aligned_cols=39 Identities=18% Similarity=0.184 Sum_probs=35.9
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCC-ceEEEeCCHHHHHHH
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKG 344 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~ 344 (721)
++|.|||+|.||.+++..|++.|. +|+++||++++++..
T Consensus 142 ~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~l 181 (297)
T 2egg_A 142 KRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERL 181 (297)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHH
T ss_pred CEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHH
Confidence 589999999999999999999998 999999999887654
No 321
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=96.86 E-value=0.00036 Score=75.00 Aligned_cols=96 Identities=20% Similarity=0.182 Sum_probs=61.3
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCce--eccCc-ccc
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLK--GVLDY-SEF 382 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~--~~~~~-~~l 382 (721)
++|+|+|+|.+|..+++.+...|.+|+++|+++++++.+.+.. |.-. ... ...++ +.+
T Consensus 169 ~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~----------g~~~---------~~~~~~~~~l~~~l 229 (377)
T 2vhw_A 169 ADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEF----------CGRI---------HTRYSSAYELEGAV 229 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT----------TTSS---------EEEECCHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhc----------CCee---------EeccCCHHHHHHHH
Confidence 6899999999999999999999999999999998876543210 1000 000 00112 345
Q ss_pred CCCCEEEEcccCChH-HHHHHHHHHHhhCCCCeEEEecC
Q 004972 383 KDVDMVIEAVIESVP-LKQKIFSELEKACPPHCILATNT 420 (721)
Q Consensus 383 ~~aDlVIeavpe~~~-~k~~v~~~l~~~~~~~~ii~s~t 420 (721)
+++|+||+|++.... ...-+.++..+.++++.+|+..+
T Consensus 230 ~~aDvVi~~~~~p~~~t~~li~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 230 KRADLVIGAVLVPGAKAPKLVSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp HHCSEEEECCCCTTSCCCCCBCHHHHTTSCTTCEEEEGG
T ss_pred cCCCEEEECCCcCCCCCcceecHHHHhcCCCCcEEEEEe
Confidence 689999998852221 11111234445677888776544
No 322
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=96.85 E-value=0.0012 Score=70.46 Aligned_cols=90 Identities=21% Similarity=0.172 Sum_probs=58.5
Q ss_pred ceeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCcee--ccCc-cc
Q 004972 305 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG--VLDY-SE 381 (721)
Q Consensus 305 ~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~--~~~~-~~ 381 (721)
-+||+|||+|.||..++..|++. ++|+++|+++++++...+ .... ..+.. ..++ +.
T Consensus 16 ~~~v~IiGaG~iG~~ia~~L~~~-~~V~V~~R~~~~a~~la~-----------~~~~---------~~~d~~~~~~l~~l 74 (365)
T 2z2v_A 16 HMKVLILGAGNIGRAIAWDLKDE-FDVYIGDVNNENLEKVKE-----------FATP---------LKVDASNFDKLVEV 74 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTT-SEEEEEESCHHHHHHHTT-----------TSEE---------EECCTTCHHHHHHH
T ss_pred CCeEEEEcCCHHHHHHHHHHHcC-CeEEEEECCHHHHHHHHh-----------hCCe---------EEEecCCHHHHHHH
Confidence 46899999999999999999988 999999999998776421 1100 00000 1112 44
Q ss_pred cCCCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecC
Q 004972 382 FKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 420 (721)
Q Consensus 382 l~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~t 420 (721)
++++|+||.|+|... -..+.. ..+..++.+++.+
T Consensus 75 l~~~DvVIn~~P~~~--~~~v~~---a~l~~G~~~vD~s 108 (365)
T 2z2v_A 75 MKEFELVIGALPGFL--GFKSIK---AAIKSKVDMVDVS 108 (365)
T ss_dssp HTTCSCEEECCCHHH--HHHHHH---HHHHTTCCEEECC
T ss_pred HhCCCEEEECCChhh--hHHHHH---HHHHhCCeEEEcc
Confidence 678999999998332 223332 2334566565533
No 323
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=96.84 E-value=0.0027 Score=67.63 Aligned_cols=98 Identities=18% Similarity=0.119 Sum_probs=60.5
Q ss_pred CCceeEEEEcCCCCcHHHHHHHHHC-CCceE-EEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCcc
Q 004972 303 RGVRKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS 380 (721)
Q Consensus 303 ~~~~kI~VIG~G~mG~~iA~~la~~-G~~V~-l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~ 380 (721)
|+..||+|||+|.||...+..+.+. +++|+ ++|+++++++.+. +. .+...++++
T Consensus 3 m~~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~a~-----------~~-------------g~~~~~~~~ 58 (359)
T 3e18_A 3 LKKYQLVIVGYGGMGSYHVTLASAADNLEVHGVFDILAEKREAAA-----------QK-------------GLKIYESYE 58 (359)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHTSTTEEEEEEECSSHHHHHHHH-----------TT-------------TCCBCSCHH
T ss_pred CCcCcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHH-----------hc-------------CCceeCCHH
Confidence 3446899999999999999988876 67775 7899998754321 11 123345553
Q ss_pred -ccC--CCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHH
Q 004972 381 -EFK--DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428 (721)
Q Consensus 381 -~l~--~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~~l 428 (721)
.++ ++|+|++|+|..... ++..+..+. ..-+++.-.-+....+.
T Consensus 59 ~ll~~~~~D~V~i~tp~~~h~--~~~~~al~a--GkhVl~EKP~a~~~~ea 105 (359)
T 3e18_A 59 AVLADEKVDAVLIATPNDSHK--ELAISALEA--GKHVVCEKPVTMTSEDL 105 (359)
T ss_dssp HHHHCTTCCEEEECSCGGGHH--HHHHHHHHT--TCEEEEESSCCSSHHHH
T ss_pred HHhcCCCCCEEEEcCCcHHHH--HHHHHHHHC--CCCEEeeCCCcCCHHHH
Confidence 333 799999999954432 333333221 22355544444554433
No 324
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=96.84 E-value=0.0023 Score=68.25 Aligned_cols=186 Identities=12% Similarity=0.030 Sum_probs=107.1
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCccccCCC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 385 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~a 385 (721)
+||+|||.|.-|.+-|++|..+|.+|++--|.....+.. ..+.+..+. ...+.+-.++++.|
T Consensus 38 K~IaVIGyGsQG~AqAlNLRDSGv~V~Vglr~~s~~e~~-----~S~~~A~~~-------------Gf~v~~~~eA~~~A 99 (491)
T 3ulk_A 38 KKVVIVGCGAQGLNQGLNMRDSGLDISYALRKEAIAEKR-----ASWRKATEN-------------GFKVGTYEELIPQA 99 (491)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCEEEEEECHHHHHTTC-----HHHHHHHHT-------------TCEEEEHHHHGGGC
T ss_pred CEEEEeCCChHhHHHHhHHHhcCCcEEEEeCCCCccccc-----chHHHHHHC-------------CCEecCHHHHHHhC
Confidence 799999999999999999999999998776633211110 001111222 24444444788999
Q ss_pred CEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhcccCCCC--cEEEecCCCCC----------CCCCee
Q 004972 386 DMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQD--RIIGAHFFSPA----------HVMPLL 453 (721)
Q Consensus 386 DlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~~l~~~~~~~~--r~ig~h~~~p~----------~~~~lv 453 (721)
|+|+.-+|+. .-..++++|.++++++..+. -+.+..+.. .....|. .++-+-|-.|- .-.|.+
T Consensus 100 DvV~~L~PD~--~q~~vy~~I~p~lk~G~~L~-faHGFnI~~--~~i~pp~dvdVimVAPKgpG~~VR~~y~~G~GvP~l 174 (491)
T 3ulk_A 100 DLVINLTPDK--QHSDVVRTVQPLMKDGAALG-YSHGFNIVE--VGEQIRKDITVVMVAPKCPGTEVREEYKRGFGVPTL 174 (491)
T ss_dssp SEEEECSCGG--GHHHHHHHHGGGSCTTCEEE-ESSCHHHHT--TCCCCCTTSEEEEEEESSCHHHHHHHHHTTCCCCEE
T ss_pred CEEEEeCChh--hHHHHHHHHHhhCCCCCEEE-ecCcccccc--cccccCCCcceEEeCCCCCcHHHHHHHHcCCCCceE
Confidence 9999999954 44577899999999998775 345554432 1222222 23333332221 112222
Q ss_pred EEe-cCCCCCHHHHHHHHHHHHHcCCe---eEEE--cC--CCchhhhh-hhhHHHH----HHH-HHHHcCCCHHH
Q 004972 454 EIV-RTERTSAQVILDLMTVGKIIKKV---PVVV--GN--CTGFAVNR-AFFPYSQ----SAR-LLVSLGVDVFR 514 (721)
Q Consensus 454 Eiv-~~~~t~~e~~~~~~~l~~~lG~~---~v~v--~d--~~gfi~nR-l~~~~~~----Ea~-~l~~~Gv~~~~ 514 (721)
--| +....+-.+.+.+..+...+|.. ++.. .+ ..-.+..| +++..+. .++ .+++.|.+|+.
T Consensus 175 iAVhqeqD~sG~a~~~AlayA~aiG~~raGvieTTF~eEtetDLfGEQaVLcGgl~~li~agFetLveaGy~P~~ 249 (491)
T 3ulk_A 175 IAVHPENDPKGEGMAIAKAWAAATGGHRAGVLESSFVAEVKSDLMGEQTILCGMLQAGSLLCFDKLVEEGTDPAY 249 (491)
T ss_dssp EEECGGGCTTSCHHHHHHHHHHHHTGGGTCEEECCHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHHHTTCCHHH
T ss_pred EEEEeCCCCchhHHHHHHHHHHhcCCCcCceeeccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 223 11233456778888888998854 2222 11 11123333 2333333 334 46677998854
No 325
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=96.81 E-value=0.0011 Score=71.15 Aligned_cols=98 Identities=15% Similarity=0.204 Sum_probs=59.8
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cccCC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 384 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 384 (721)
++|+|+|+|.+|..+++.+...|.+|+++|+++++++.+.+. .+.- .........++ +.+++
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~----------~g~~-------~~~~~~~~~~l~~~~~~ 229 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDV----------FGGR-------VITLTATEANIKKSVQH 229 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----------TTTS-------EEEEECCHHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh----------cCce-------EEEecCCHHHHHHHHhC
Confidence 689999999999999999999999999999999887654221 0100 00000000111 33568
Q ss_pred CCEEEEcccCChH-HHHHHHHHHHhhCCCCeEEEecC
Q 004972 385 VDMVIEAVIESVP-LKQKIFSELEKACPPHCILATNT 420 (721)
Q Consensus 385 aDlVIeavpe~~~-~k~~v~~~l~~~~~~~~ii~s~t 420 (721)
+|+||.|++-... ...-+.++..+.++++.+|+..+
T Consensus 230 ~DvVi~~~g~~~~~~~~li~~~~l~~mk~gg~iV~v~ 266 (369)
T 2eez_A 230 ADLLIGAVLVPGAKAPKLVTRDMLSLMKEGAVIVDVA 266 (369)
T ss_dssp CSEEEECCC-------CCSCHHHHTTSCTTCEEEECC
T ss_pred CCEEEECCCCCccccchhHHHHHHHhhcCCCEEEEEe
Confidence 9999999973321 11111244455567777666444
No 326
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=96.80 E-value=0.0015 Score=68.84 Aligned_cols=101 Identities=14% Similarity=0.061 Sum_probs=59.1
Q ss_pred CCCceeEEEEcCCCCcHHHHHHHHHC-CCceE-EEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc
Q 004972 302 PRGVRKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 379 (721)
Q Consensus 302 ~~~~~kI~VIG~G~mG~~iA~~la~~-G~~V~-l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~ 379 (721)
.+++.||+|||+|.||..++..+.+. +.+|+ ++|+++++++... ++. +.....+++
T Consensus 2 ~m~~~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~~~~~~~~~a-----------~~~-----------~~~~~~~~~ 59 (329)
T 3evn_A 2 SLSKVRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRTLESAQAFA-----------NKY-----------HLPKAYDKL 59 (329)
T ss_dssp ---CEEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECSCSSTTCC--------------CC-----------CCSCEESCH
T ss_pred CCCceEEEEEechHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHH-----------HHc-----------CCCcccCCH
Confidence 34557899999999999999988765 45555 7899988754421 111 111245566
Q ss_pred -cccC--CCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHH
Q 004972 380 -SEFK--DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428 (721)
Q Consensus 380 -~~l~--~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~~l 428 (721)
+.++ ++|+|++|+|.... .++.....+. ..-+++...-+....+.
T Consensus 60 ~~ll~~~~~D~V~i~tp~~~h--~~~~~~al~a--Gk~Vl~EKP~a~~~~e~ 107 (329)
T 3evn_A 60 EDMLADESIDVIYVATINQDH--YKVAKAALLA--GKHVLVEKPFTLTYDQA 107 (329)
T ss_dssp HHHHTCTTCCEEEECSCGGGH--HHHHHHHHHT--TCEEEEESSCCSSHHHH
T ss_pred HHHhcCCCCCEEEECCCcHHH--HHHHHHHHHC--CCeEEEccCCcCCHHHH
Confidence 3344 79999999995443 2333333221 22355554445555443
No 327
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=96.80 E-value=0.0039 Score=66.11 Aligned_cols=108 Identities=14% Similarity=0.155 Sum_probs=64.6
Q ss_pred ceeEEEEc-CCCCcHHHHHHHHHCCC--c---eEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceec-c
Q 004972 305 VRKVAVIG-GGLMGSGIATAHILNNI--Y---VVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGV-L 377 (721)
Q Consensus 305 ~~kI~VIG-~G~mG~~iA~~la~~G~--~---V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~-~ 377 (721)
..||+|+| +|.+|.+++..++..+. + |.++|.+.+..+...+...-. +..+.. ..+..+..+ .
T Consensus 32 ~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amD----L~h~~~------p~~~~v~i~~~ 101 (375)
T 7mdh_A 32 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAME----LEDSLY------PLLREVSIGID 101 (375)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHH----HHTTTC------TTEEEEEEESC
T ss_pred CCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHh----HHhhhh------hhcCCcEEecC
Confidence 36899999 79999999999999876 3 888766544322211111000 111110 011223334 3
Q ss_pred CccccCCCCEEEEcc--cC------------ChHHHHHHHHHHHhhCCCCeEEEecCCC
Q 004972 378 DYSEFKDVDMVIEAV--IE------------SVPLKQKIFSELEKACPPHCILATNTST 422 (721)
Q Consensus 378 ~~~~l~~aDlVIeav--pe------------~~~~k~~v~~~l~~~~~~~~ii~s~ts~ 422 (721)
+++++++||+||.+. |- |..+.+.+...+.++..++++++..|..
T Consensus 102 ~y~~~~daDvVVitag~prkpG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsNP 160 (375)
T 7mdh_A 102 PYEVFEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGNP 160 (375)
T ss_dssp HHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSS
T ss_pred CHHHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCc
Confidence 468899999999865 21 2345555556677776677777665544
No 328
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=96.80 E-value=0.0013 Score=66.75 Aligned_cols=65 Identities=15% Similarity=0.087 Sum_probs=50.0
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCccccCCC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 385 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~a 385 (721)
++|.|||+|-||.+++..|++.|.+|++++|++++++... .+ + +.. .+++.+.++
T Consensus 119 k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~----------------------~-~~~-~~~~~l~~~ 173 (269)
T 3phh_A 119 QNALILGAGGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RL----------------------G-CDC-FMEPPKSAF 173 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HH----------------------T-CEE-ESSCCSSCC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HC----------------------C-CeE-ecHHHhccC
Confidence 4899999999999999999999999999999998876542 11 0 111 123445589
Q ss_pred CEEEEcccCC
Q 004972 386 DMVIEAVIES 395 (721)
Q Consensus 386 DlVIeavpe~ 395 (721)
|+||.|+|-.
T Consensus 174 DiVInaTp~G 183 (269)
T 3phh_A 174 DLIINATSAS 183 (269)
T ss_dssp SEEEECCTTC
T ss_pred CEEEEcccCC
Confidence 9999999843
No 329
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=96.75 E-value=0.0038 Score=66.41 Aligned_cols=100 Identities=15% Similarity=0.176 Sum_probs=62.0
Q ss_pred CCCceeEEEEcCCCCcHHHHHHHH-H-CCCceE-EEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhc-Cceecc
Q 004972 302 PRGVRKVAVIGGGLMGSGIATAHI-L-NNIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALK-MLKGVL 377 (721)
Q Consensus 302 ~~~~~kI~VIG~G~mG~~iA~~la-~-~G~~V~-l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~i~~~~ 377 (721)
.|+..||+|||+|.||...+..+. + .+.+|+ ++|+++++++...+. .+ .....+
T Consensus 20 ~m~~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~----------------------~g~~~~~~~ 77 (357)
T 3ec7_A 20 QGMTLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDIVAGRAQAALDK----------------------YAIEAKDYN 77 (357)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECSSTTHHHHHHHH----------------------HTCCCEEES
T ss_pred CCCeeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHH----------------------hCCCCeeeC
Confidence 344568999999999999999998 4 467766 899999887664321 11 134456
Q ss_pred Ccc-ccC--CCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHH
Q 004972 378 DYS-EFK--DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 427 (721)
Q Consensus 378 ~~~-~l~--~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~~ 427 (721)
+++ .++ ++|+|++|+|.... .++.....+. ..-+++.-.-+....+
T Consensus 78 ~~~~ll~~~~~D~V~i~tp~~~h--~~~~~~al~a--Gk~Vl~EKPla~~~~e 126 (357)
T 3ec7_A 78 DYHDLINDKDVEVVIITASNEAH--ADVAVAALNA--NKYVFCEKPLAVTAAD 126 (357)
T ss_dssp SHHHHHHCTTCCEEEECSCGGGH--HHHHHHHHHT--TCEEEEESSSCSSHHH
T ss_pred CHHHHhcCCCCCEEEEcCCcHHH--HHHHHHHHHC--CCCEEeecCccCCHHH
Confidence 663 333 68999999995443 3333333221 2235544444455544
No 330
>3u9r_B MCC beta, methylcrotonyl-COA carboxylase, beta-subunit; carboxyltransferase, beta-BETA-alpha superhelix, ligase; HET: 1PE; 1.50A {Pseudomonas aeruginosa} PDB: 3u9s_B* 3u9t_B
Probab=96.71 E-value=0.029 Score=62.23 Aligned_cols=143 Identities=15% Similarity=0.082 Sum_probs=92.0
Q ss_pred CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccCCCcccccchHHHHHHHHHHhhCCCcEEEE
Q 004972 25 VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAA 104 (721)
Q Consensus 25 ~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~p~Iaa 104 (721)
.-++.+...+.+..+++.+.+. .+-+|.|.-.|+ +.+.+-..... ....+...+ ..+ ..+.....|+|++
T Consensus 134 gGS~g~~~~~Ki~ra~e~A~~~-~lPvI~l~dSgG-----ARl~~q~~~~~--~~~~~~~i~-~~~-~~ls~~giP~Isv 203 (555)
T 3u9r_B 134 GGTYYPLTVKKHLRAQAIALEN-RLPCIYLVDSGG-----ANLPRQDEVFP--DREHFGRIF-FNQ-ANMSARGIPQIAV 203 (555)
T ss_dssp GGCBCHHHHHHHHHHHHHHHHH-TCCEEEEECCCC-----BCGGGGGGTSS--STTSTTHHH-HHH-HHHHHTTCCEEEE
T ss_pred cCCCCHHHHHHHHHHHHHHHHc-CCCEEEEECCCC-----CCCCCcceeec--ccccHHHHH-HHH-HHHhcCCCCEEEE
Confidence 4788899999999999988765 345666654333 33321111000 011122222 222 2356678999999
Q ss_pred ECCcccccchHhhhhcCEEEeeC-CceEeCcccccCccccccccccccCHHHHHHHHHcCCCcCHHHH-------HHcCC
Q 004972 105 VEGLALGGGLELAMGCHARIAAP-KTQLGLPELTLGVIPGTQRLPRLVGLSKAIEMMLLSKSITSEEG-------WKLGL 176 (721)
Q Consensus 105 v~G~a~GgG~~lalacD~ria~~-~a~~~~pe~~~Gl~P~~~~l~r~~G~~~a~~l~ltg~~~~a~eA-------~~~Gl 176 (721)
|.|.|.|||......||++|+.+ ++.+++. |+.... ..+|+.+++++. ...|+
T Consensus 204 v~G~~~GGga~~~a~~d~vim~e~~a~i~~a-----------------GP~vik--~~~ge~~~~e~LGGa~~h~~~sGv 264 (555)
T 3u9r_B 204 VMGSCTAGGAYVPAMSDETVMVREQATIFLA-----------------GPPLVK--AATGEVVSAEELGGADVHCKVSGV 264 (555)
T ss_dssp ECSCCBGGGGHHHHTSSEEEEETTTCBCBSS-----------------CHHHHH--HHHCCCCCHHHHHBHHHHHHTTCS
T ss_pred EecCCCccHHHHHHhCCceEEecCCceEEEc-----------------cHHHHH--HHhcCccChhhccchhhhhhccCc
Confidence 99999999999999999998875 4554442 332221 257899999988 78999
Q ss_pred ccEEcCCchHHHHHHHHHHHHHh
Q 004972 177 IDAVVTSEELLKVSRLWALDIAA 199 (721)
Q Consensus 177 v~~vv~~~~l~~~a~~~a~~~a~ 199 (721)
+|.++++++ .+...++++.+
T Consensus 265 ~d~v~~de~---~a~~~~r~~ls 284 (555)
T 3u9r_B 265 ADHYAEDDD---HALAIARRCVA 284 (555)
T ss_dssp CSEEESSHH---HHHHHHHHHHH
T ss_pred eeEEeCCHH---HHHHHHHHHHH
Confidence 999997653 34444445433
No 331
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=96.71 E-value=0.0048 Score=65.26 Aligned_cols=95 Identities=14% Similarity=0.145 Sum_probs=60.3
Q ss_pred eeEEEEcCCCCcHHHHHHHH-H-CCCceE-EEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhc-CceeccCccc
Q 004972 306 RKVAVIGGGLMGSGIATAHI-L-NNIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALK-MLKGVLDYSE 381 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la-~-~G~~V~-l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~i~~~~~~~~ 381 (721)
.||+|||+|.||...+..+. + .+++|+ ++|+++++++...+. .+ .....++++.
T Consensus 3 ~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~~~~~~~~~~~~----------------------~g~~~~~~~~~~~ 60 (344)
T 3mz0_A 3 LRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDVNQEAAQKVVEQ----------------------YQLNATVYPNDDS 60 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTCSSEEEEEEECSSHHHHHHHHHH----------------------TTCCCEEESSHHH
T ss_pred EEEEEECccHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHH----------------------hCCCCeeeCCHHH
Confidence 58999999999999999998 4 467766 899999887654221 11 1344566633
Q ss_pred -cC--CCCEEEEcccCChHHHHHHHHHHHhhCCCC-eEEEecCCCCCHHH
Q 004972 382 -FK--DVDMVIEAVIESVPLKQKIFSELEKACPPH-CILATNTSTIDLNI 427 (721)
Q Consensus 382 -l~--~aDlVIeavpe~~~~k~~v~~~l~~~~~~~-~ii~s~ts~~~i~~ 427 (721)
++ ++|+|++|+|.... .++..+.. ..+ -+++.-.-+....+
T Consensus 61 ll~~~~~D~V~i~tp~~~h--~~~~~~al---~~Gk~vl~EKP~a~~~~e 105 (344)
T 3mz0_A 61 LLADENVDAVLVTSWGPAH--ESSVLKAI---KAQKYVFCEKPLATTAEG 105 (344)
T ss_dssp HHHCTTCCEEEECSCGGGH--HHHHHHHH---HTTCEEEECSCSCSSHHH
T ss_pred HhcCCCCCEEEECCCchhH--HHHHHHHH---HCCCcEEEcCCCCCCHHH
Confidence 43 59999999995443 23333332 233 34544343455544
No 332
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=96.70 E-value=0.0054 Score=64.39 Aligned_cols=68 Identities=19% Similarity=0.127 Sum_probs=47.6
Q ss_pred eEEEEcCCCCcHHH-HHHHHHCCCceE-EEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cccC
Q 004972 307 KVAVIGGGLMGSGI-ATAHILNNIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 383 (721)
Q Consensus 307 kI~VIG~G~mG~~i-A~~la~~G~~V~-l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~ 383 (721)
||+|||+|.||..+ +..+.+.|++|+ ++|+++++++...+. -+ .....+++ +.++
T Consensus 2 ~vgiiG~G~~g~~~~~~~l~~~~~~~vav~d~~~~~~~~~~~~----------~g------------~~~~~~~~~~~l~ 59 (332)
T 2glx_A 2 RWGLIGASTIAREWVIGAIRATGGEVVSMMSTSAERGAAYATE----------NG------------IGKSVTSVEELVG 59 (332)
T ss_dssp EEEEESCCHHHHHTHHHHHHHTTCEEEEEECSCHHHHHHHHHH----------TT------------CSCCBSCHHHHHT
T ss_pred eEEEEcccHHHHHhhhHHhhcCCCeEEEEECCCHHHHHHHHHH----------cC------------CCcccCCHHHHhc
Confidence 79999999999998 777777788865 899999886653211 01 11124455 3343
Q ss_pred --CCCEEEEcccCCh
Q 004972 384 --DVDMVIEAVIESV 396 (721)
Q Consensus 384 --~aDlVIeavpe~~ 396 (721)
++|+|++|+|...
T Consensus 60 ~~~~D~V~i~tp~~~ 74 (332)
T 2glx_A 60 DPDVDAVYVSTTNEL 74 (332)
T ss_dssp CTTCCEEEECSCGGG
T ss_pred CCCCCEEEEeCChhH
Confidence 5999999999443
No 333
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=96.69 E-value=0.0025 Score=67.86 Aligned_cols=100 Identities=12% Similarity=0.048 Sum_probs=60.9
Q ss_pred CCceeEEEEcCCCCcHH-HHHHHHHC-CCceE-EEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc
Q 004972 303 RGVRKVAVIGGGLMGSG-IATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 379 (721)
Q Consensus 303 ~~~~kI~VIG~G~mG~~-iA~~la~~-G~~V~-l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~ 379 (721)
|+..||+|||+|.||.. ++..+.+. +.+|+ ++|+++++++... +. .+.....+++
T Consensus 3 M~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a-----------~~-----------~~~~~~~~~~ 60 (359)
T 3m2t_A 3 LSLIKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDSDLERARRVH-----------RF-----------ISDIPVLDNV 60 (359)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHHHTCTTEEEEEEECSSHHHHGGGG-----------GT-----------SCSCCEESSH
T ss_pred CCcceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHH-----------Hh-----------cCCCcccCCH
Confidence 34568999999999985 88888775 67776 8999998865431 11 1223445666
Q ss_pred cc-cC--CCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHH
Q 004972 380 SE-FK--DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428 (721)
Q Consensus 380 ~~-l~--~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~~l 428 (721)
+. ++ +.|+|++|+| ...-.++..+..+. ..-+++.-.-+....+.
T Consensus 61 ~~ll~~~~vD~V~i~tp--~~~H~~~~~~al~a--GkhVl~EKPla~~~~e~ 108 (359)
T 3m2t_A 61 PAMLNQVPLDAVVMAGP--PQLHFEMGLLAMSK--GVNVFVEKPPCATLEEL 108 (359)
T ss_dssp HHHHHHSCCSEEEECSC--HHHHHHHHHHHHHT--TCEEEECSCSCSSHHHH
T ss_pred HHHhcCCCCCEEEEcCC--cHHHHHHHHHHHHC--CCeEEEECCCcCCHHHH
Confidence 43 43 5699999999 33333444333221 22245443334554443
No 334
>2bzr_A Propionyl-COA carboxylase beta chain 5; fatty acid biosynthesis, accase, ligase, transferase; 2.2A {Mycobacterium tuberculosis} PDB: 2a7s_A
Probab=96.68 E-value=0.031 Score=62.23 Aligned_cols=134 Identities=15% Similarity=0.056 Sum_probs=88.9
Q ss_pred CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccCCCcccccchHHHHHHHHHHh--hCCCcEE
Q 004972 25 VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIE--DCKKPIV 102 (721)
Q Consensus 25 ~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~p~I 102 (721)
.-++.....+.+..+++.+.++ .+-+|.|.- |.|+.+.+-.. .+. .+...+ ..+. .-..|.|
T Consensus 121 gGS~g~~~~~Ki~ra~e~A~~~-~lP~I~l~d-----SGGARmqeg~~--------sl~-~~~~i~-~~~~~~s~~iP~I 184 (548)
T 2bzr_A 121 GGSLGEVYGEKIVKVQELAIKT-GRPLIGIND-----GAGARIQEGVV--------SLG-LYSRIF-RNNILASGVIPQI 184 (548)
T ss_dssp GGCCCHHHHHHHHHHHHHHHHH-TCCEEEEEC-----CCSCCGGGTTH--------HHH-HHHHHH-HHHHHTTTTSCEE
T ss_pred cCCCChhHHHHHHHHHHHHHHc-CCCEEEEEc-----CCCCCchhHHH--------HHH-HHHHHH-HHHHHhcCCCcEE
Confidence 4789999999999999988765 455677765 44555543211 111 111222 1122 3349999
Q ss_pred EEECCcccccchHhhhhcCEEEeeCC-ceEeCcccccCccccccccccccCHHHHHHHHHcCCCcCHH-----H--HHHc
Q 004972 103 AAVEGLALGGGLELAMGCHARIAAPK-TQLGLPELTLGVIPGTQRLPRLVGLSKAIEMMLLSKSITSE-----E--GWKL 174 (721)
Q Consensus 103 aav~G~a~GgG~~lalacD~ria~~~-a~~~~pe~~~Gl~P~~~~l~r~~G~~~a~~l~ltg~~~~a~-----e--A~~~ 174 (721)
+++.|+|.||+......||++|+.++ +.+++. |+..... .+|+.++.+ + +.+.
T Consensus 185 svv~gp~~GG~a~s~al~D~ii~~~~~a~i~~a-----------------GP~vI~~--~~ge~v~~e~lggae~h~~~s 245 (548)
T 2bzr_A 185 SLIMGAAAGGHVYSPALTDFVIMVDQTSQMFIT-----------------GPDVIKT--VTGEEVTMEELGGAHTHMAKS 245 (548)
T ss_dssp EEECSEEESGGGHHHHHSSEEEEETTTCEEESS-----------------CHHHHHH--HHCCCCCHHHHHBHHHHHHTS
T ss_pred EEecCCCchHHHHHHHhCCeEEeccCceeEEec-----------------cHHHHHH--HhCCcCChHhcccHHHHhhcc
Confidence 99999999999988889999999986 888775 3332222 468888764 2 2368
Q ss_pred CCccEEcCCc-hHHHHHHHH
Q 004972 175 GLIDAVVTSE-ELLKVSRLW 193 (721)
Q Consensus 175 Glv~~vv~~~-~l~~~a~~~ 193 (721)
|++|.+++++ ++.+.+..+
T Consensus 246 G~~d~vv~d~~~~~~~~r~l 265 (548)
T 2bzr_A 246 GTAHYAASGEQDAFDYVREL 265 (548)
T ss_dssp SCCSEEESSHHHHHHHHHHH
T ss_pred CceeEEeCCHHHHHHHHHHH
Confidence 9999999754 344444433
No 335
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=96.67 E-value=0.006 Score=55.83 Aligned_cols=101 Identities=13% Similarity=0.069 Sum_probs=64.4
Q ss_pred eeEEEEcC----CCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCccc
Q 004972 306 RKVAVIGG----GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE 381 (721)
Q Consensus 306 ~kI~VIG~----G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 381 (721)
++|+|||+ |.+|..++..|.+.|++ +|++++.. +. ...+....++++
T Consensus 23 ~~iaVVGas~~~g~~G~~~~~~l~~~G~~--v~~Vnp~~-~~--------------------------i~G~~~y~sl~~ 73 (144)
T 2d59_A 23 KKIALVGASPKPERDANIVMKYLLEHGYD--VYPVNPKY-EE--------------------------VLGRKCYPSVLD 73 (144)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHTTCE--EEEECTTC-SE--------------------------ETTEECBSSGGG
T ss_pred CEEEEEccCCCCCchHHHHHHHHHHCCCE--EEEECCCC-Ce--------------------------ECCeeccCCHHH
Confidence 57999999 79999999999999997 56666542 00 012444455544
Q ss_pred c-CCCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhcccC-CCCcEEE
Q 004972 382 F-KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTS-SQDRIIG 440 (721)
Q Consensus 382 l-~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~~l~~~~~-~~~r~ig 440 (721)
+ ..+|++|.++| .+...+++.++.+.- ...++.. ++..-.++.+... ..-+++|
T Consensus 74 l~~~vDlvvi~vp--~~~~~~vv~~~~~~g-i~~i~~~--~g~~~~~l~~~a~~~Gi~vvG 129 (144)
T 2d59_A 74 IPDKIEVVDLFVK--PKLTMEYVEQAIKKG-AKVVWFQ--YNTYNREASKKADEAGLIIVA 129 (144)
T ss_dssp CSSCCSEEEECSC--HHHHHHHHHHHHHHT-CSEEEEC--TTCCCHHHHHHHHHTTCEEEE
T ss_pred cCCCCCEEEEEeC--HHHHHHHHHHHHHcC-CCEEEEC--CCchHHHHHHHHHHcCCEEEc
Confidence 4 57999999999 677778887766543 3355543 3333344444332 3345554
No 336
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=96.65 E-value=0.0034 Score=57.15 Aligned_cols=103 Identities=11% Similarity=0.033 Sum_probs=65.3
Q ss_pred eeEEEEcC----CCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCccc
Q 004972 306 RKVAVIGG----GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE 381 (721)
Q Consensus 306 ~kI~VIG~----G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 381 (721)
++|+|||+ |.||..++..|.+.|++ +|++++..... ....+....++++
T Consensus 14 ~~vaVvGas~~~g~~G~~~~~~l~~~G~~--v~~vnp~~~~~-------------------------~i~G~~~~~sl~e 66 (140)
T 1iuk_A 14 KTIAVLGAHKDPSRPAHYVPRYLREQGYR--VLPVNPRFQGE-------------------------ELFGEEAVASLLD 66 (140)
T ss_dssp CEEEEETCCSSTTSHHHHHHHHHHHTTCE--EEEECGGGTTS-------------------------EETTEECBSSGGG
T ss_pred CEEEEECCCCCCCChHHHHHHHHHHCCCE--EEEeCCCcccC-------------------------cCCCEEecCCHHH
Confidence 57999999 89999999999999997 66777653100 0012444555544
Q ss_pred c-CCCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhcccC-CCCcEEE
Q 004972 382 F-KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTS-SQDRIIG 440 (721)
Q Consensus 382 l-~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~~l~~~~~-~~~r~ig 440 (721)
+ ...|++|.++| .+...+++.++.+.-.. .+++. +++. -.++.+... ..-+++|
T Consensus 67 l~~~vDlavi~vp--~~~~~~v~~~~~~~gi~-~i~~~-~g~~-~~~~~~~a~~~Gir~vg 122 (140)
T 1iuk_A 67 LKEPVDILDVFRP--PSALMDHLPEVLALRPG-LVWLQ-SGIR-HPEFEKALKEAGIPVVA 122 (140)
T ss_dssp CCSCCSEEEECSC--HHHHTTTHHHHHHHCCS-CEEEC-TTCC-CHHHHHHHHHTTCCEEE
T ss_pred CCCCCCEEEEEeC--HHHHHHHHHHHHHcCCC-EEEEc-CCcC-HHHHHHHHHHcCCEEEc
Confidence 4 56999999999 67777778776654333 45433 3333 344443332 3345554
No 337
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=96.64 E-value=0.0021 Score=65.61 Aligned_cols=40 Identities=15% Similarity=0.161 Sum_probs=36.6
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHH
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGI 345 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~ 345 (721)
++|.|+|+|.||.+++..|++.|.+|++++|++++++...
T Consensus 120 ~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~ 159 (272)
T 1p77_A 120 QHVLILGAGGATKGVLLPLLQAQQNIVLANRTFSKTKELA 159 (272)
T ss_dssp CEEEEECCSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence 5899999999999999999999999999999998876653
No 338
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=96.64 E-value=0.0048 Score=62.89 Aligned_cols=65 Identities=15% Similarity=0.097 Sum_probs=49.0
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCC-ceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCccccCC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 384 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~ 384 (721)
++|.|||+|-||.+++..|+..|. +|++++|+.++++...+.+ + .....+.. +.+
T Consensus 120 ~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~----------~-------------~~~~~~~~-~~~ 175 (271)
T 1npy_A 120 AKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY----------G-------------YAYINSLE-NQQ 175 (271)
T ss_dssp SCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH----------T-------------CEEESCCT-TCC
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc----------C-------------Cccchhhh-ccc
Confidence 579999999999999999999997 8999999998876643211 0 01111222 468
Q ss_pred CCEEEEcccC
Q 004972 385 VDMVIEAVIE 394 (721)
Q Consensus 385 aDlVIeavpe 394 (721)
+|+||.|+|-
T Consensus 176 ~DivInaTp~ 185 (271)
T 1npy_A 176 ADILVNVTSI 185 (271)
T ss_dssp CSEEEECSST
T ss_pred CCEEEECCCC
Confidence 9999999983
No 339
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=96.62 E-value=0.0022 Score=65.68 Aligned_cols=40 Identities=10% Similarity=0.091 Sum_probs=36.4
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCC-ceEEEeCCHHHHHHHH
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGI 345 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~ 345 (721)
++|.|+|+|-||.+++..|++.|. +|++++|++++++...
T Consensus 127 k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la 167 (281)
T 3o8q_A 127 ATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLA 167 (281)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHH
T ss_pred CEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHH
Confidence 589999999999999999999996 9999999998877654
No 340
>1on3_A Methylmalonyl-COA carboxyltransferase 12S subunit; domain duplication, multienzyme complex, transcarboxylase; HET: MCA; 1.90A {Propionibacterium freudenreichii} SCOP: c.14.1.4 c.14.1.4 PDB: 1on9_A*
Probab=96.57 E-value=0.032 Score=61.81 Aligned_cols=148 Identities=15% Similarity=0.087 Sum_probs=94.6
Q ss_pred EEEEEeCCC-CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccCCCcccccchHHHHHHHHH
Q 004972 15 VAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNL 93 (721)
Q Consensus 15 v~~i~l~~p-~~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (721)
|+++..+-. ..-++.....+.+..+++.+.++ .+-+|.|+. |.|+.+.+-... ...+.+.+.... +
T Consensus 97 v~v~a~D~t~~gGS~g~~~~~Ki~ra~e~A~~~-~lP~I~l~~-----SGGARmqeg~~s-----l~~~~~i~~~~~-~- 163 (523)
T 1on3_A 97 VHAASQDFTVMGGSAGETQSTKVVETMEQALLT-GTPFLFFYD-----SGGARIQEGIDS-----LSGYGKMFFANV-K- 163 (523)
T ss_dssp EEEEEECTTTGGGCBCHHHHHHHHHHHHHHHHH-TCCEEEEEE-----ECSBCGGGTHHH-----HHHHHHHHHHHH-H-
T ss_pred EEEEEEcCCccCCcCcHHHHHHHHHHHHHHHHc-CCCEEEEEc-----CCCCChhhHHHH-----HHHHHHHHHHHH-H-
Confidence 333333333 24789999999999999988765 455677765 445555432110 001111111111 1
Q ss_pred HhhCCCcEEEEECCcccccchHhhhhcCEEEeeCCceEeCcccccCccccccccccccCHHHHHHHHHcCCCcCHH----
Q 004972 94 IEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGTQRLPRLVGLSKAIEMMLLSKSITSE---- 169 (721)
Q Consensus 94 l~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~a~~~~pe~~~Gl~P~~~~l~r~~G~~~a~~l~ltg~~~~a~---- 169 (721)
+ .-..|.|+++.|+|.||+......||++|+.+++.+++. |+..... .+|+.++.+
T Consensus 164 ~-s~~iP~Isvv~gp~~GG~a~s~~l~D~ii~~~~a~i~~a-----------------GP~vI~~--~~ge~~~~e~lgg 223 (523)
T 1on3_A 164 L-SGVVPQIAIIAGPCAGGASYSPALTDFIIMTKKAHMFIT-----------------GPQVIKS--VTGEDVTADELGG 223 (523)
T ss_dssp H-TTTSCEEEEEEEEEESGGGHHHHHSSEEEEETTCEEESS-----------------CHHHHHH--HHCCCCCHHHHHS
T ss_pred h-cCCCCEEEEEcCCCchHHHHHHhhCCeEEEeCCCEEEec-----------------CHHHHHH--HhCCcCChHhccc
Confidence 2 344999999999999999999999999999999988876 3332222 467888764
Q ss_pred -HHH--HcCCccEEcCCc-hHHHHHHHHHH
Q 004972 170 -EGW--KLGLIDAVVTSE-ELLKVSRLWAL 195 (721)
Q Consensus 170 -eA~--~~Glv~~vv~~~-~l~~~a~~~a~ 195 (721)
+.+ +.|++|.+++++ ++.+.+..+..
T Consensus 224 ae~h~~~~G~vd~vv~d~~~~~~~~r~lL~ 253 (523)
T 1on3_A 224 AEAHMAISGNIHFVAEDDDAAELIAKKLLS 253 (523)
T ss_dssp HHHHHHTTCCCSEEESSHHHHHHHHHHHHH
T ss_pred HHHHhhccCceEEEeCCHHHHHHHHHHHHH
Confidence 223 689999999853 45555555443
No 341
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=96.56 E-value=0.0083 Score=65.01 Aligned_cols=39 Identities=13% Similarity=0.168 Sum_probs=36.6
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHH
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKG 344 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~ 344 (721)
++|.|+|.|.+|..++..|...|++|+++|.+++.++.+
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~ 43 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETL 43 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHH
Confidence 479999999999999999999999999999999998765
No 342
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=96.56 E-value=0.004 Score=63.53 Aligned_cols=39 Identities=13% Similarity=0.131 Sum_probs=36.0
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHH
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKG 344 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~ 344 (721)
++|.|+|+|.||.+++..|++.|.+|+++||++++++..
T Consensus 120 k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~~~~~~l 158 (271)
T 1nyt_A 120 LRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEEL 158 (271)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHH
T ss_pred CEEEEECCcHHHHHHHHHHHHcCCEEEEEECCHHHHHHH
Confidence 589999999999999999999999999999999887654
No 343
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=96.55 E-value=0.0045 Score=65.67 Aligned_cols=39 Identities=18% Similarity=0.190 Sum_probs=35.8
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHH
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKG 344 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~ 344 (721)
++|+|+|+|.||..+|..|...|.+|+++|+++++++..
T Consensus 174 ktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~ 212 (364)
T 1leh_A 174 LAVSVQGLGNVAKALCKKLNTEGAKLVVTDVNKAAVSAA 212 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence 589999999999999999999999999999999876654
No 344
>1x0u_A Hypothetical methylmalonyl-COA decarboxylase ALPH; lyase; 2.20A {Sulfolobus tokodaii}
Probab=96.52 E-value=0.035 Score=61.59 Aligned_cols=140 Identities=16% Similarity=0.102 Sum_probs=92.0
Q ss_pred CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccCCCcccccchHHHHHHHHHHhhCCCcEEEE
Q 004972 25 VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAA 104 (721)
Q Consensus 25 ~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~p~Iaa 104 (721)
.-++.....+.+..+++.+.+. .+-+|.|+. |.|+.+.+-... ...+.+.+.+.. + + .-..|.|++
T Consensus 104 gGS~g~~~~~Ki~ra~e~A~~~-~~P~I~l~~-----SGGaRmqeg~~s-----l~~~~~i~~~~~-~-~-s~~iP~Isv 169 (522)
T 1x0u_A 104 GGSLGETHANKIVRAYELALKV-GAPVVGIND-----SGGARIQEGALS-----LEGYGAVFKMNV-M-A-SGVIPQITI 169 (522)
T ss_dssp GGCBCHHHHHHHHHHHHHHHHH-TCCEEEEEC-----CCSBCGGGTHHH-----HHHHHHHHHHHH-H-H-TTTSCEEEE
T ss_pred CccccHHHHHHHHHHHHHHHHc-CCCEEEEEc-----CCCCChhHHHHH-----HHHHHHHHHHHH-H-h-CCCCcEEEE
Confidence 4789999999999999988765 455677775 455655432110 001111111111 1 2 345999999
Q ss_pred ECCcccccchHhhhhcCEEEeeCC-c-eEeCcccccCccccccccccccCHHHHHHHHHcCCCcCHH-----HHH--HcC
Q 004972 105 VEGLALGGGLELAMGCHARIAAPK-T-QLGLPELTLGVIPGTQRLPRLVGLSKAIEMMLLSKSITSE-----EGW--KLG 175 (721)
Q Consensus 105 v~G~a~GgG~~lalacD~ria~~~-a-~~~~pe~~~Gl~P~~~~l~r~~G~~~a~~l~ltg~~~~a~-----eA~--~~G 175 (721)
+.|+|.||+......||++|+.++ + .+++. |+..... .+|+.++.+ +.+ +.|
T Consensus 170 v~gp~~GG~a~s~~l~D~~i~~~~~a~~i~~a-----------------GP~vI~~--~~ge~~~~e~lggae~~~~~~G 230 (522)
T 1x0u_A 170 MAGPAAGGAVYSPALTDFIIMIKGDAYYMFVT-----------------GPEITKV--VLGEEVSFQDLGGAVVHATKSG 230 (522)
T ss_dssp ECSEEEGGGGHHHHHSSEEEEECSTTCEEESS-----------------CHHHHHH--TTCCCCCHHHHHBHHHHHHTTC
T ss_pred EcCCCchHHHHHHhcCCeEEEecCCccEEEec-----------------CHHHHHH--HhCCcCChhhcchHHHHhhcCc
Confidence 999999999998899999999987 7 77764 3222221 467787764 222 689
Q ss_pred CccEEcCC-chHHHHHHHHHHHH
Q 004972 176 LIDAVVTS-EELLKVSRLWALDI 197 (721)
Q Consensus 176 lv~~vv~~-~~l~~~a~~~a~~~ 197 (721)
++|.++++ .++.+.+.++..-+
T Consensus 231 ~~d~vv~~~~~~~~~~~~ll~~l 253 (522)
T 1x0u_A 231 VVHFMVDSEQEAINLTKRLLSYL 253 (522)
T ss_dssp CCSEEESCHHHHHHHHHHHHHHS
T ss_pred eeEEEeCCHHHHHHHHHHHHHhc
Confidence 99999985 45666655555443
No 345
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=96.52 E-value=0.0033 Score=67.17 Aligned_cols=39 Identities=33% Similarity=0.339 Sum_probs=34.0
Q ss_pred ceeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHH
Q 004972 305 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKG 344 (721)
Q Consensus 305 ~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~ 344 (721)
-+||.|||+|.+|+.+|..|++ .++|+++|++.++++++
T Consensus 16 ~mkilvlGaG~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~ 54 (365)
T 3abi_A 16 HMKVLILGAGNIGRAIAWDLKD-EFDVYIGDVNNENLEKV 54 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTT-TSEEEEEESCHHHHHHH
T ss_pred ccEEEEECCCHHHHHHHHHHhc-CCCeEEEEcCHHHHHHH
Confidence 3589999999999999998865 58999999999887764
No 346
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=96.42 E-value=0.0041 Score=62.64 Aligned_cols=33 Identities=15% Similarity=0.311 Sum_probs=31.2
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCC-ceEEEeCCH
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNS 338 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~-~V~l~d~~~ 338 (721)
++|.|||+|.+|+.+|..|++.|. +|+++|.+.
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 589999999999999999999997 899999987
No 347
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=96.41 E-value=0.00054 Score=70.07 Aligned_cols=38 Identities=13% Similarity=0.117 Sum_probs=34.5
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCC-ceEEEeCCHHHHHH
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLK 343 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~-~V~l~d~~~~~~~~ 343 (721)
++|.|||+|-||.+++..|++.|. +|++++|++++++.
T Consensus 118 k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~ 156 (277)
T 3don_A 118 AYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNN 156 (277)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGGGGTT
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHH
Confidence 579999999999999999999999 99999999887443
No 348
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=96.40 E-value=0.0035 Score=64.30 Aligned_cols=43 Identities=16% Similarity=0.286 Sum_probs=37.8
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCC-ceEEEeCCHHHHHHHHHHH
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTI 348 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~~ 348 (721)
+++.|+|+|-+|.+++..|+..|. +|++++|++++++...+.+
T Consensus 128 k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~ 171 (283)
T 3jyo_A 128 DSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVI 171 (283)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHH
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHH
Confidence 589999999999999999999998 6999999999887665433
No 349
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=96.39 E-value=0.0048 Score=64.07 Aligned_cols=84 Identities=14% Similarity=0.061 Sum_probs=50.0
Q ss_pred ceeEEEEcCCCCcHHHHHHHHHC-CCceE-EEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCcccc
Q 004972 305 VRKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF 382 (721)
Q Consensus 305 ~~kI~VIG~G~mG~~iA~~la~~-G~~V~-l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l 382 (721)
..||+|||+|.||..++..+.+. +++|+ ++|+++++++. .| + .....+++...
T Consensus 9 ~irv~IIG~G~iG~~~~~~l~~~~~~elvav~d~~~~~~~~--------------~g-~----------~~~~~~~l~~~ 63 (304)
T 3bio_A 9 KIRAAIVGYGNIGRYALQALREAPDFEIAGIVRRNPAEVPF--------------EL-Q----------PFRVVSDIEQL 63 (304)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECC---------------------CC-T----------TSCEESSGGGS
T ss_pred CCEEEEECChHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHH--------------cC-C----------CcCCHHHHHhC
Confidence 45899999999999999999874 67877 79999876431 11 0 01113344334
Q ss_pred CCCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEe
Q 004972 383 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 418 (721)
Q Consensus 383 ~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s 418 (721)
.++|+||+|+| ...-.++... .+..+.-+++
T Consensus 64 ~~~DvViiatp--~~~h~~~~~~---al~aG~~Vi~ 94 (304)
T 3bio_A 64 ESVDVALVCSP--SREVERTALE---ILKKGICTAD 94 (304)
T ss_dssp SSCCEEEECSC--HHHHHHHHHH---HHTTTCEEEE
T ss_pred CCCCEEEECCC--chhhHHHHHH---HHHcCCeEEE
Confidence 78999999999 4333344333 3344544444
No 350
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=96.39 E-value=0.0054 Score=67.11 Aligned_cols=87 Identities=17% Similarity=0.176 Sum_probs=60.8
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCccccCCC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 385 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~a 385 (721)
++|.|+|+|.+|.++|..|+..|.+|+++|+++...+.+.. .+ ....+..+.+..+
T Consensus 266 KtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~-----------~g-------------~dv~~lee~~~~a 321 (488)
T 3ond_A 266 KVAVVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQATM-----------EG-------------LQVLTLEDVVSEA 321 (488)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-----------TT-------------CEECCGGGTTTTC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-----------hC-------------CccCCHHHHHHhc
Confidence 58999999999999999999999999999999987655421 11 1222222557889
Q ss_pred CEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecC
Q 004972 386 DMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 420 (721)
Q Consensus 386 DlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~t 420 (721)
|+|+++....-.+..+ ....++++.+|+...
T Consensus 322 DvVi~atG~~~vl~~e----~l~~mk~gaiVvNaG 352 (488)
T 3ond_A 322 DIFVTTTGNKDIIMLD----HMKKMKNNAIVCNIG 352 (488)
T ss_dssp SEEEECSSCSCSBCHH----HHTTSCTTEEEEESS
T ss_pred CEEEeCCCChhhhhHH----HHHhcCCCeEEEEcC
Confidence 9999886422222222 344568888886544
No 351
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=96.33 E-value=0.016 Score=61.65 Aligned_cols=73 Identities=14% Similarity=0.100 Sum_probs=49.6
Q ss_pred ceeEEEEcCCCCcHHHHHHHHHC-CCce-EEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCcc-c
Q 004972 305 VRKVAVIGGGLMGSGIATAHILN-NIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS-E 381 (721)
Q Consensus 305 ~~kI~VIG~G~mG~~iA~~la~~-G~~V-~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~-~ 381 (721)
+.||+|||+|.||..++..+... ++++ .++|+++++++...+. -+ +. ......++++ .
T Consensus 6 ~~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d~~~~~~~~~a~~----------~~-~~--------~~~~~~~~~~~l 66 (362)
T 1ydw_A 6 QIRIGVMGCADIARKVSRAIHLAPNATISGVASRSLEKAKAFATA----------NN-YP--------ESTKIHGSYESL 66 (362)
T ss_dssp CEEEEEESCCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHH----------TT-CC--------TTCEEESSHHHH
T ss_pred ceEEEEECchHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHH----------hC-CC--------CCCeeeCCHHHH
Confidence 45899999999999999998875 5665 5899999876553211 01 00 0133445663 3
Q ss_pred cC--CCCEEEEcccCCh
Q 004972 382 FK--DVDMVIEAVIESV 396 (721)
Q Consensus 382 l~--~aDlVIeavpe~~ 396 (721)
++ ++|+|++|+|...
T Consensus 67 l~~~~~D~V~i~tp~~~ 83 (362)
T 1ydw_A 67 LEDPEIDALYVPLPTSL 83 (362)
T ss_dssp HHCTTCCEEEECCCGGG
T ss_pred hcCCCCCEEEEcCChHH
Confidence 43 6999999999444
No 352
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=96.33 E-value=0.0026 Score=68.93 Aligned_cols=70 Identities=19% Similarity=0.331 Sum_probs=49.9
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCC-ceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cccC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 383 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~ 383 (721)
++|+|||+|.||..+++.+...|. +|+++|+++++++.....+ |. ..+. .+++ +.+.
T Consensus 168 ~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~----------g~----------~~~~-~~~l~~~l~ 226 (404)
T 1gpj_A 168 KTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL----------GG----------EAVR-FDELVDHLA 226 (404)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH----------TC----------EECC-GGGHHHHHH
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc----------CC----------ceec-HHhHHHHhc
Confidence 589999999999999999999998 8999999998764322110 10 0011 1222 3457
Q ss_pred CCCEEEEcccCCh
Q 004972 384 DVDMVIEAVIESV 396 (721)
Q Consensus 384 ~aDlVIeavpe~~ 396 (721)
++|+||.|++...
T Consensus 227 ~aDvVi~at~~~~ 239 (404)
T 1gpj_A 227 RSDVVVSATAAPH 239 (404)
T ss_dssp TCSEEEECCSSSS
T ss_pred CCCEEEEccCCCC
Confidence 8999999998544
No 353
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=96.31 E-value=0.0082 Score=65.10 Aligned_cols=153 Identities=16% Similarity=0.126 Sum_probs=83.3
Q ss_pred eeEEEEcCCCCcHHHHHHHHHC-CCc-eEEEeCCHHHHHHHHHHHHHHHHhhhhcCCC----CHHHHHHh--hcCceecc
Q 004972 306 RKVAVIGGGLMGSGIATAHILN-NIY-VVLKEVNSEYLLKGIKTIEANVRGLVTRGKL----TQDKANNA--LKMLKGVL 377 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~-G~~-V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~----~~~~~~~~--~~~i~~~~ 377 (721)
-||||||+|.||..++..+.+. +.+ |.++|+++++++...+.. +. ....+ +..+.... .+....++
T Consensus 24 IRVGIIGaG~iG~~~~~~l~~~~~veLvAV~D~~~era~~~a~~~---yG---~~~~~~~~~~~~~i~~a~~~g~~~v~~ 97 (446)
T 3upl_A 24 IRIGLIGAGEMGTDIVTQVARMQGIEVGALSARRLPNTFKAIRTA---YG---DEENAREATTESAMTRAIEAGKIAVTD 97 (446)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSSSEEEEEEECSSTHHHHHHHHHH---HS---SSTTEEECSSHHHHHHHHHTTCEEEES
T ss_pred eEEEEECChHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHh---cC---CccccccccchhhhhhhhccCCceEEC
Confidence 4899999999999999887654 555 458999999877653221 00 00000 11111111 12355677
Q ss_pred Cccc-cC--CCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHH---HHhcccCCCCcEEEecCCCCCCCCC
Q 004972 378 DYSE-FK--DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN---IVGEKTSSQDRIIGAHFFSPAHVMP 451 (721)
Q Consensus 378 ~~~~-l~--~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~---~l~~~~~~~~r~ig~h~~~p~~~~~ 451 (721)
|++. ++ +.|+|++|+|...........-+ ..+.=|++........ ++.+.......+
T Consensus 98 D~eeLL~d~dIDaVviaTp~p~~H~e~a~~AL----~AGKHVv~~nk~l~~~eg~eL~~~A~e~Gvv------------- 160 (446)
T 3upl_A 98 DNDLILSNPLIDVIIDATGIPEVGAETGIAAI----RNGKHLVMMNVEADVTIGPYLKAQADKQGVI------------- 160 (446)
T ss_dssp CHHHHHTCTTCCEEEECSCCHHHHHHHHHHHH----HTTCEEEECCHHHHHHHHHHHHHHHHHHTCC-------------
T ss_pred CHHHHhcCCCCCEEEEcCCChHHHHHHHHHHH----HcCCcEEecCcccCHHHHHHHHHHHHHhCCe-------------
Confidence 7743 43 68999999984222222222223 3333333322222222 222222111111
Q ss_pred eeEEecCCCCCHHHHHHHHHHHHHcCCeeEEEc
Q 004972 452 LLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 484 (721)
Q Consensus 452 lvEiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~ 484 (721)
+.......+..+..+..+.+.+|..++.++
T Consensus 161 ---l~~~~gdqp~~~~eLv~~a~~~G~~~v~~G 190 (446)
T 3upl_A 161 ---YSLGAGDEPSSCMELIEFVSALGYEVVSAG 190 (446)
T ss_dssp ---EEECTTSHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred ---eeecCCcchHHHHHHHHHHHhCCCeEEEec
Confidence 122222347778889999999999999986
No 354
>1x0u_A Hypothetical methylmalonyl-COA decarboxylase ALPH; lyase; 2.20A {Sulfolobus tokodaii}
Probab=96.21 E-value=0.068 Score=59.26 Aligned_cols=158 Identities=12% Similarity=0.118 Sum_probs=94.6
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccCCCcccccchHHHHHHHHHHhhCCCcEEEEE
Q 004972 26 NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAV 105 (721)
Q Consensus 26 Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~p~Iaav 105 (721)
-+++.+..+.+.+.++.+.+. .+-+|.|.-.++ |..|.+-.. .-........+ ..+.+...|.|+.|
T Consensus 339 G~l~~~~~~K~ar~i~~a~~~-~~Plv~l~ds~G-~~~G~~~E~----------~G~~~~~Ak~l-~~~~~~~vP~Isvi 405 (522)
T 1x0u_A 339 GSIDIDAADKAARFIRFCDAF-NIPLISLVDTPG-YVPGTDQEY----------KGIIRHGAKML-YAFAEATVPKITVI 405 (522)
T ss_dssp GCBCHHHHHHHHHHHHHHHHT-TCCEEEEEEECC-BCCSHHHHH----------TTHHHHHHHHH-HHHHHCCSCEEEEE
T ss_pred CCcCHHHHHHHHHHHHHHhhC-CCCEEEEecCCC-CCCchHHHH----------HHHHHHHHHHH-HHHHhCCCCEEEEE
Confidence 689999999999999988754 455666654322 333322111 01112333455 56788999999999
Q ss_pred CCcccccchHhhh----hcCEEEeeCCceEeCcccc--cCcccccccccc-----ccCHHHHHHHHHcCCCcCHHHHHHc
Q 004972 106 EGLALGGGLELAM----GCHARIAAPKTQLGLPELT--LGVIPGTQRLPR-----LVGLSKAIEMMLLSKSITSEEGWKL 174 (721)
Q Consensus 106 ~G~a~GgG~~lal----acD~ria~~~a~~~~pe~~--~Gl~P~~~~l~r-----~~G~~~a~~l~ltg~~~~a~eA~~~ 174 (721)
-|.|.|||..... .+|+++|.+++.+++-... ..++--. .+.+ .+-.....+. .-..-++..+.+.
T Consensus 406 ~g~~~GGg~~~~a~~a~~~D~v~a~p~A~i~v~gpegaa~Il~r~-~i~~~~d~~~~~~~l~~~y--~~~~~~~~~~~~~ 482 (522)
T 1x0u_A 406 VRKSYGGAHIAMSIKSLGADLVYAWPTAEIAVTGPEGAVRILYRK-EIQQASNPDDVLKQRIAEY--RKLFANPYWAAEK 482 (522)
T ss_dssp EEEEEHHHHHHTCCGGGTCSEEEECTTCEEESSCHHHHHHHHTSS-SSSSSSSSSSSSHHHHHHH--HHHHSSSHHHHHT
T ss_pred eCCcccHHHHHhcccccCCCEEEEeCCCEEEecCHHHHHHHHhhh-hhhcccCHHHHHHHHHHHH--HHhcCCHHHHHhc
Confidence 9999999764443 4999999999888763211 1110000 0000 0111111100 0012356779999
Q ss_pred CCccEEcCCchHHHHHHHHHHHHHh
Q 004972 175 GLIDAVVTSEELLKVSRLWALDIAA 199 (721)
Q Consensus 175 Glv~~vv~~~~l~~~a~~~a~~~a~ 199 (721)
|+||.|+++.++.+......+.+..
T Consensus 483 G~iD~II~p~~tR~~L~~~L~~~~~ 507 (522)
T 1x0u_A 483 GLVDDVIEPKDTRRVIVAGLEMLKT 507 (522)
T ss_dssp TSSSEECCGGGHHHHHHHHHHHHTT
T ss_pred CCCcEeECHHHHHHHHHHHHHHHhh
Confidence 9999999998877766665555543
No 355
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=96.20 E-value=0.014 Score=61.32 Aligned_cols=71 Identities=15% Similarity=0.042 Sum_probs=49.9
Q ss_pred ceeEEEEcCCCCcH-HHHHHHHHCCCce-EEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCccc-
Q 004972 305 VRKVAVIGGGLMGS-GIATAHILNNIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE- 381 (721)
Q Consensus 305 ~~kI~VIG~G~mG~-~iA~~la~~G~~V-~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~- 381 (721)
..||||||+|.||. .++..+...|++| .++|+++++++...+. .+.....++++.
T Consensus 4 ~~rvgiiG~G~~~~~~~~~~l~~~~~~lvav~d~~~~~~~~~a~~----------------------~~~~~~~~~~~~l 61 (336)
T 2p2s_A 4 KIRFAAIGLAHNHIYDMCQQLIDAGAELAGVFESDSDNRAKFTSL----------------------FPSVPFAASAEQL 61 (336)
T ss_dssp CCEEEEECCSSTHHHHHHHHHHHTTCEEEEEECSCTTSCHHHHHH----------------------STTCCBCSCHHHH
T ss_pred ccEEEEECCChHHHHHhhhhhcCCCcEEEEEeCCCHHHHHHHHHh----------------------cCCCcccCCHHHH
Confidence 45899999999996 6777777778886 5999999876654221 112334556633
Q ss_pred cC--CCCEEEEcccCChH
Q 004972 382 FK--DVDMVIEAVIESVP 397 (721)
Q Consensus 382 l~--~aDlVIeavpe~~~ 397 (721)
++ ++|+|++|+|....
T Consensus 62 l~~~~~D~V~i~tp~~~h 79 (336)
T 2p2s_A 62 ITDASIDLIACAVIPCDR 79 (336)
T ss_dssp HTCTTCCEEEECSCGGGH
T ss_pred hhCCCCCEEEEeCChhhH
Confidence 43 69999999995544
No 356
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=96.20 E-value=0.0093 Score=60.74 Aligned_cols=40 Identities=18% Similarity=0.165 Sum_probs=36.4
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCC-ceEEEeCCHHHHHHHH
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGI 345 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~ 345 (721)
+++.|+|+|-+|.+++..|++.|. +|++++|++++++...
T Consensus 121 k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la 161 (272)
T 3pwz_A 121 RRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALR 161 (272)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHH
T ss_pred CEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH
Confidence 689999999999999999999996 9999999998877653
No 357
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=96.15 E-value=0.0094 Score=65.60 Aligned_cols=40 Identities=18% Similarity=0.297 Sum_probs=37.2
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHH
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGI 345 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~ 345 (721)
|||.|+|+|.+|..+|..|...|++|+++|.+++.++.+.
T Consensus 4 M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~ 43 (461)
T 4g65_A 4 MKIIILGAGQVGGTLAENLVGENNDITIVDKDGDRLRELQ 43 (461)
T ss_dssp EEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH
Confidence 5899999999999999999999999999999999987653
No 358
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=96.10 E-value=0.0067 Score=62.03 Aligned_cols=39 Identities=15% Similarity=0.016 Sum_probs=35.6
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCC-ceEEEeCCHHHHHHH
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKG 344 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~ 344 (721)
+++.|+|+|-+|.+++..|+..|. +|++++|++++++..
T Consensus 123 k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~~ka~~L 162 (282)
T 3fbt_A 123 NICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNPEKTSEI 162 (282)
T ss_dssp SEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCHHHHHHH
T ss_pred CEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHH
Confidence 589999999999999999999998 899999999886653
No 359
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=96.07 E-value=0.0028 Score=68.50 Aligned_cols=39 Identities=26% Similarity=0.160 Sum_probs=35.8
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHH
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKG 344 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~ 344 (721)
.+|+|||+|.+|..+++.+...|.+|+++|++++.++.+
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~ 211 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQV 211 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGGGHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence 589999999999999999999999999999999876654
No 360
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=96.06 E-value=0.0089 Score=63.25 Aligned_cols=73 Identities=14% Similarity=0.136 Sum_probs=50.4
Q ss_pred CCceeEEEEcCCCCcHH-HHHHHHHC-CCceE-EEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc
Q 004972 303 RGVRKVAVIGGGLMGSG-IATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 379 (721)
Q Consensus 303 ~~~~kI~VIG~G~mG~~-iA~~la~~-G~~V~-l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~ 379 (721)
+.|.||||||+|.||.. .+..+... +.+|+ ++|+++++++...++ .+.-...+|+
T Consensus 21 ~~mirigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~----------------------~g~~~~y~d~ 78 (350)
T 4had_A 21 QSMLRFGIISTAKIGRDNVVPAIQDAENCVVTAIASRDLTRAREMADR----------------------FSVPHAFGSY 78 (350)
T ss_dssp -CCEEEEEESCCHHHHHTHHHHHHHCSSEEEEEEECSSHHHHHHHHHH----------------------HTCSEEESSH
T ss_pred cCccEEEEEcChHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHH----------------------cCCCeeeCCH
Confidence 45679999999999975 45666654 66766 899999987664321 1222345666
Q ss_pred cc-c--CCCCEEEEcccCChH
Q 004972 380 SE-F--KDVDMVIEAVIESVP 397 (721)
Q Consensus 380 ~~-l--~~aDlVIeavpe~~~ 397 (721)
+. + .+.|+|++|+|....
T Consensus 79 ~ell~~~~iDaV~I~tP~~~H 99 (350)
T 4had_A 79 EEMLASDVIDAVYIPLPTSQH 99 (350)
T ss_dssp HHHHHCSSCSEEEECSCGGGH
T ss_pred HHHhcCCCCCEEEEeCCCchh
Confidence 43 3 568999999995544
No 361
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=96.03 E-value=0.019 Score=62.61 Aligned_cols=77 Identities=16% Similarity=0.095 Sum_probs=50.9
Q ss_pred CCceeEEEEcCCCCcH-HHHHHHHHC-CCce-EEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc
Q 004972 303 RGVRKVAVIGGGLMGS-GIATAHILN-NIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 379 (721)
Q Consensus 303 ~~~~kI~VIG~G~mG~-~iA~~la~~-G~~V-~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~ 379 (721)
++..||+|||+|.||. .++..+.+. +++| .++|+++++++...+. -| +.. ..+...+++
T Consensus 81 ~~~irigiIG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~a~~----------~g-~~~-------~~~~~~~~~ 142 (433)
T 1h6d_A 81 DRRFGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAE----------YG-VDP-------RKIYDYSNF 142 (433)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHH----------TT-CCG-------GGEECSSSG
T ss_pred CCceEEEEECCcHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHH----------hC-CCc-------ccccccCCH
Confidence 4456899999999997 898888765 5665 5899999876653211 01 000 012335566
Q ss_pred cc-cC--CCCEEEEcccCChH
Q 004972 380 SE-FK--DVDMVIEAVIESVP 397 (721)
Q Consensus 380 ~~-l~--~aDlVIeavpe~~~ 397 (721)
+. ++ ++|+|++|+|....
T Consensus 143 ~~ll~~~~vD~V~iatp~~~h 163 (433)
T 1h6d_A 143 DKIAKDPKIDAVYIILPNSLH 163 (433)
T ss_dssp GGGGGCTTCCEEEECSCGGGH
T ss_pred HHHhcCCCCCEEEEcCCchhH
Confidence 43 44 79999999995443
No 362
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=96.02 E-value=0.017 Score=58.90 Aligned_cols=39 Identities=10% Similarity=0.100 Sum_probs=35.5
Q ss_pred ceeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHH
Q 004972 305 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLK 343 (721)
Q Consensus 305 ~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~ 343 (721)
++||.|.|+|.+|+.++..|.+.|++|++.+++++..+.
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~ 43 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNPDQMEA 43 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCGGGHHH
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcChhhhhh
Confidence 468999999999999999999999999999999876544
No 363
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=96.00 E-value=0.0044 Score=66.05 Aligned_cols=97 Identities=19% Similarity=0.231 Sum_probs=60.7
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCcee-ccCc-cccC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG-VLDY-SEFK 383 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~-~~~~-~~l~ 383 (721)
++|.|+|+|.+|..+++.+...|.+|+++|+++++++.+.+... ..+ ..+.. ..++ +.+.
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~----~~~--------------~~~~~~~~~~~~~~~ 229 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFG----SRV--------------ELLYSNSAEIETAVA 229 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG----GGS--------------EEEECCHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhC----cee--------------EeeeCCHHHHHHHHc
Confidence 68999999999999999999999999999999998776532110 000 00000 0111 3456
Q ss_pred CCCEEEEcccCChHHHHH-HHHHHHhhCCCCeEEEecC
Q 004972 384 DVDMVIEAVIESVPLKQK-IFSELEKACPPHCILATNT 420 (721)
Q Consensus 384 ~aDlVIeavpe~~~~k~~-v~~~l~~~~~~~~ii~s~t 420 (721)
++|+||.|++-....... +.++..+.++++.++++..
T Consensus 230 ~~DvVI~~~~~~~~~~~~li~~~~~~~~~~g~~ivdv~ 267 (361)
T 1pjc_A 230 EADLLIGAVLVPGRRAPILVPASLVEQMRTGSVIVDVA 267 (361)
T ss_dssp TCSEEEECCCCTTSSCCCCBCHHHHTTSCTTCEEEETT
T ss_pred CCCEEEECCCcCCCCCCeecCHHHHhhCCCCCEEEEEe
Confidence 899999999632210000 1122334566777666544
No 364
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=95.97 E-value=0.0073 Score=61.59 Aligned_cols=102 Identities=17% Similarity=0.114 Sum_probs=56.7
Q ss_pred CCceeEEEEcC-CCCcHHHHHHHHH-CCCceE-EEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc
Q 004972 303 RGVRKVAVIGG-GLMGSGIATAHIL-NNIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 379 (721)
Q Consensus 303 ~~~~kI~VIG~-G~mG~~iA~~la~-~G~~V~-l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~ 379 (721)
++..||+|+|+ |.||..++..+.. .|++|+ ++|++++.... .+.+.+. ......+..++++
T Consensus 3 ~~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g------------~d~~~~~----g~~~~~v~~~~dl 66 (273)
T 1dih_A 3 DANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLG------------SDAGELA----GAGKTGVTVQSSL 66 (273)
T ss_dssp CCBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCS------------CCTTCSS----SSSCCSCCEESCS
T ss_pred CCCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhh------------hhHHHHc----CCCcCCceecCCH
Confidence 34468999998 9999999998774 578877 78887643100 0000000 0000123335566
Q ss_pred -cccCCCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCH
Q 004972 380 -SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL 425 (721)
Q Consensus 380 -~~l~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i 425 (721)
+.+.++|+||++.+ ++...+.+... +..+.-+++.|+++..
T Consensus 67 ~~~l~~~DvVIDft~--p~~~~~~~~~a---~~~G~~vVigTtG~~~ 108 (273)
T 1dih_A 67 DAVKDDFDVFIDFTR--PEGTLNHLAFC---RQHGKGMVIGTTGFDE 108 (273)
T ss_dssp TTTTTSCSEEEECSC--HHHHHHHHHHH---HHTTCEEEECCCCCCH
T ss_pred HHHhcCCCEEEEcCC--hHHHHHHHHHH---HhCCCCEEEECCCCCH
Confidence 44678999998775 44333333332 3334434444445443
No 365
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=95.96 E-value=0.021 Score=59.89 Aligned_cols=97 Identities=11% Similarity=0.045 Sum_probs=59.4
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCC---Cc-eEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCccc
Q 004972 306 RKVAVIGGGLMGSGIATAHILNN---IY-VVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE 381 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G---~~-V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 381 (721)
.||+|||+|.||...+..+...+ ++ |.++|+++++++...+. .+.-...++++.
T Consensus 3 ~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~~~~~a~~~a~~----------------------~~~~~~~~~~~~ 60 (334)
T 3ohs_X 3 LRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQK----------------------HDIPKAYGSYEE 60 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECSSHHHHHHHHHH----------------------HTCSCEESSHHH
T ss_pred cEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcCCHHHHHHHHHH----------------------cCCCcccCCHHH
Confidence 58999999999999999887654 34 55889999887664321 111123556633
Q ss_pred -c--CCCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHH
Q 004972 382 -F--KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428 (721)
Q Consensus 382 -l--~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~~l 428 (721)
+ .++|+|++|+|..... ++..+.... ..-+++.-.-+....+.
T Consensus 61 ll~~~~vD~V~i~tp~~~H~--~~~~~al~~--GkhVl~EKP~a~~~~e~ 106 (334)
T 3ohs_X 61 LAKDPNVEVAYVGTQHPQHK--AAVMLCLAA--GKAVLCEKPMGVNAAEV 106 (334)
T ss_dssp HHHCTTCCEEEECCCGGGHH--HHHHHHHHT--TCEEEEESSSSSSHHHH
T ss_pred HhcCCCCCEEEECCCcHHHH--HHHHHHHhc--CCEEEEECCCCCCHHHH
Confidence 3 3699999999955443 333332221 22355544444555443
No 366
>2b0j_A 5,10-methenyltetrahydromethanopterin hydrogenase; rossmann fold, helix bundle, oxidoreductase; 1.75A {Methanocaldococcus jannaschii} SCOP: a.100.1.11 c.2.1.6 PDB: 3f47_A* 3daf_A* 3dag_A* 3f46_A* 3h65_A*
Probab=95.96 E-value=0.091 Score=52.30 Aligned_cols=109 Identities=18% Similarity=0.174 Sum_probs=78.5
Q ss_pred ceeccC-ccccCCCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhcc---cCCC-CcEEEecCCCCC
Q 004972 373 LKGVLD-YSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEK---TSSQ-DRIIGAHFFSPA 447 (721)
Q Consensus 373 i~~~~~-~~~l~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~~l~~~---~~~~-~r~ig~h~~~p~ 447 (721)
+..++| .++++++|++|.-.|.. .....+.+++.+++++++|| +||.++++..+... +.+. -.+..+||-.=|
T Consensus 129 VkVtsDD~EAvk~AEi~IlftPfG-~~t~~Iakkii~~lpEgAII-~nTCTipp~~ly~~le~l~R~DvgIsS~HPaaVP 206 (358)
T 2b0j_A 129 LKVTSDDREAVEGADIVITWLPKG-NKQPDIIKKFADAIPEGAIV-THACTIPTTKFAKIFKDLGREDLNITSYHPGCVP 206 (358)
T ss_dssp CEEESCHHHHHTTCSEEEECCTTC-TTHHHHHHHHGGGSCTTCEE-EECSSSCHHHHHHHHHHTTCTTSEEEECBCSSCT
T ss_pred cEeecchHHHhcCCCEEEEecCCC-CCcHHHHHHHHhhCcCCCEE-ecccCCCHHHHHHHHHHhCcccCCeeccCCCCCC
Confidence 455544 48899999999999853 23457889999999999987 57777777644433 3333 457778886533
Q ss_pred CCCCeeEEecCCCCCHHHHHHHHHHHHHcCCeeEEEc
Q 004972 448 HVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 484 (721)
Q Consensus 448 ~~~~lvEiv~~~~t~~e~~~~~~~l~~~lG~~~v~v~ 484 (721)
.. ..-........++|+++++.++.+..|+.+.++.
T Consensus 207 gt-~Gq~~~g~~yAtEEqIeklveLaksa~k~ay~vP 242 (358)
T 2b0j_A 207 EM-KGQVYIAEGYASEEAVNKLYEIGKIARGKAFKMP 242 (358)
T ss_dssp TT-CCCEEEEESSSCHHHHHHHHHHHHHHHSCEEEEE
T ss_pred CC-CCccccccccCCHHHHHHHHHHHHHhCCCeEecc
Confidence 32 2223444455689999999999999999999883
No 367
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=95.92 E-value=0.0035 Score=63.78 Aligned_cols=102 Identities=15% Similarity=0.082 Sum_probs=59.3
Q ss_pred CCceeEEEEc-CCCCcHHHHHHHHHC-CCceEE-EeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc
Q 004972 303 RGVRKVAVIG-GGLMGSGIATAHILN-NIYVVL-KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 379 (721)
Q Consensus 303 ~~~~kI~VIG-~G~mG~~iA~~la~~-G~~V~l-~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~ 379 (721)
|+|.||+|+| .|.||..++..+.+. +++++. +|++.+.... ...+.+. .....+..++++
T Consensus 5 M~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G------------~d~gel~-----g~~~gv~v~~dl 67 (272)
T 4f3y_A 5 MSSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLG------------QDAGAFL-----GKQTGVALTDDI 67 (272)
T ss_dssp -CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTT------------SBTTTTT-----TCCCSCBCBCCH
T ss_pred ccccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCccccc------------ccHHHHh-----CCCCCceecCCH
Confidence 4468999999 799999999988765 677664 7877432100 0001000 000124445666
Q ss_pred -cccCCCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHH
Q 004972 380 -SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 426 (721)
Q Consensus 380 -~~l~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~ 426 (721)
+.+.++|+||++.+ ++...+.+.... ..+.-+++.|++++..
T Consensus 68 ~~ll~~~DVVIDfT~--p~a~~~~~~~al---~~G~~vVigTTG~s~~ 110 (272)
T 4f3y_A 68 ERVCAEADYLIDFTL--PEGTLVHLDAAL---RHDVKLVIGTTGFSEP 110 (272)
T ss_dssp HHHHHHCSEEEECSC--HHHHHHHHHHHH---HHTCEEEECCCCCCHH
T ss_pred HHHhcCCCEEEEcCC--HHHHHHHHHHHH---HcCCCEEEECCCCCHH
Confidence 34678999999986 554444444433 3344455556665543
No 368
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=95.91 E-value=0.047 Score=58.02 Aligned_cols=98 Identities=8% Similarity=0.120 Sum_probs=60.2
Q ss_pred ceeEEEEcCCCCcH-HHHHHHHHCCCceE-EEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCccc-
Q 004972 305 VRKVAVIGGGLMGS-GIATAHILNNIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE- 381 (721)
Q Consensus 305 ~~kI~VIG~G~mG~-~iA~~la~~G~~V~-l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~- 381 (721)
..||||||+|.+|. .++..+...+.+|+ ++|+++++++...+. .+.....++++.
T Consensus 26 ~irvgiiG~G~~~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~----------------------~~~~~~~~~~~~l 83 (361)
T 3u3x_A 26 ELRFAAVGLNHNHIYGQVNCLLRAGARLAGFHEKDDALAAEFSAV----------------------YADARRIATAEEI 83 (361)
T ss_dssp CCEEEEECCCSTTHHHHHHHHHHTTCEEEEEECSCHHHHHHHHHH----------------------SSSCCEESCHHHH
T ss_pred CcEEEEECcCHHHHHHHHHHhhcCCcEEEEEEcCCHHHHHHHHHH----------------------cCCCcccCCHHHH
Confidence 35899999999995 56777777888854 899999987664321 122344566633
Q ss_pred c--CCCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHH
Q 004972 382 F--KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 428 (721)
Q Consensus 382 l--~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~~l 428 (721)
+ .+.|+|++|+|... -.++.....+. ..-+++--.-+....+.
T Consensus 84 l~~~~vD~V~I~tp~~~--H~~~~~~al~a--GkhVl~EKPla~~~~ea 128 (361)
T 3u3x_A 84 LEDENIGLIVSAAVSSE--RAELAIRAMQH--GKDVLVDKPGMTSFDQL 128 (361)
T ss_dssp HTCTTCCEEEECCCHHH--HHHHHHHHHHT--TCEEEEESCSCSSHHHH
T ss_pred hcCCCCCEEEEeCChHH--HHHHHHHHHHC--CCeEEEeCCCCCCHHHH
Confidence 3 35899999999433 33443333221 22355544444555443
No 369
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=95.88 E-value=0.029 Score=55.16 Aligned_cols=130 Identities=13% Similarity=0.139 Sum_probs=76.7
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCccccCCC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 385 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~a 385 (721)
++|.|||+|.+|..-+..|.+.|.+|++++.+.... +..+.+.+.+. .+...-..+.+.++
T Consensus 32 k~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~~~~----------l~~l~~~~~i~---------~i~~~~~~~dL~~a 92 (223)
T 3dfz_A 32 RSVLVVGGGTIATRRIKGFLQEGAAITVVAPTVSAE----------INEWEAKGQLR---------VKRKKVGEEDLLNV 92 (223)
T ss_dssp CCEEEECCSHHHHHHHHHHGGGCCCEEEECSSCCHH----------HHHHHHTTSCE---------EECSCCCGGGSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHH----------HHHHHHcCCcE---------EEECCCCHhHhCCC
Confidence 689999999999999999999999999999864321 11122223211 01111122568899
Q ss_pred CEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhcccCCCCcEEEecCCCCC--CCCCeeEEecCCCCCH
Q 004972 386 DMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPA--HVMPLLEIVRTERTSA 463 (721)
Q Consensus 386 DlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~~l~~~~~~~~r~ig~h~~~p~--~~~~lvEiv~~~~t~~ 463 (721)
|+||-|. ++.++...+. ..++.+ |++ |...-+- . ..|+.|. ..++++--|.+.+.+|
T Consensus 93 dLVIaAT-~d~~~N~~I~----~~ak~g-i~V-NvvD~p~-----~---------~~f~~Paiv~rg~l~iaIST~G~sP 151 (223)
T 3dfz_A 93 FFIVVAT-NDQAVNKFVK----QHIKND-QLV-NMASSFS-----D---------GNIQIPAQFSRGRLSLAISTDGASP 151 (223)
T ss_dssp SEEEECC-CCTHHHHHHH----HHSCTT-CEE-EC----------C---------CSEECCEEEEETTEEEEEECTTSCH
T ss_pred CEEEECC-CCHHHHHHHH----HHHhCC-CEE-EEeCCcc-----c---------CeEEEeeEEEeCCEEEEEECCCCCc
Confidence 9999775 4555544443 334433 333 2222110 0 1222332 2345655667777899
Q ss_pred HHHHHHHHHHHH
Q 004972 464 QVILDLMTVGKI 475 (721)
Q Consensus 464 e~~~~~~~l~~~ 475 (721)
.....++.-++.
T Consensus 152 ~la~~iR~~ie~ 163 (223)
T 3dfz_A 152 LLTKRIKEDLSS 163 (223)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 888888887765
No 370
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=95.87 E-value=0.021 Score=60.64 Aligned_cols=70 Identities=16% Similarity=0.146 Sum_probs=48.1
Q ss_pred CCceeEEEEcCCCCcHH-HHHHHHHC-CCceE-EEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc
Q 004972 303 RGVRKVAVIGGGLMGSG-IATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 379 (721)
Q Consensus 303 ~~~~kI~VIG~G~mG~~-iA~~la~~-G~~V~-l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~ 379 (721)
|++.||||||+|.||.. .+..+.+. +++|+ ++|++++++.. ........+++
T Consensus 3 m~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~-------------------------~~~~~~~~~~~ 57 (358)
T 3gdo_A 3 LDTIKVGILGYGLSGSVFHGPLLDVLDEYQISKIMTSRTEEVKR-------------------------DFPDAEVVHEL 57 (358)
T ss_dssp TTCEEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECSCHHHHHH-------------------------HCTTSEEESST
T ss_pred CCcceEEEEccCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHh-------------------------hCCCCceECCH
Confidence 34568999999999997 56666554 67764 88999865221 01124456676
Q ss_pred c-ccC--CCCEEEEcccCChH
Q 004972 380 S-EFK--DVDMVIEAVIESVP 397 (721)
Q Consensus 380 ~-~l~--~aDlVIeavpe~~~ 397 (721)
+ .++ +.|+|++|+|....
T Consensus 58 ~~ll~~~~vD~V~i~tp~~~H 78 (358)
T 3gdo_A 58 EEITNDPAIELVIVTTPSGLH 78 (358)
T ss_dssp HHHHTCTTCCEEEECSCTTTH
T ss_pred HHHhcCCCCCEEEEcCCcHHH
Confidence 3 344 78999999996554
No 371
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=95.86 E-value=0.009 Score=65.56 Aligned_cols=40 Identities=18% Similarity=0.160 Sum_probs=36.0
Q ss_pred CceeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHH
Q 004972 304 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLK 343 (721)
Q Consensus 304 ~~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~ 343 (721)
.+++|.|+|+|.+|..++..|++.|++|+++|+++++++.
T Consensus 2 ~~k~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~ 41 (450)
T 1ff9_A 2 ATKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTLESAKK 41 (450)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHTTTCEEEEEESSHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEEEEECCHHHHHH
Confidence 3578999999999999999999999999999999887654
No 372
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=95.86 E-value=0.013 Score=60.18 Aligned_cols=74 Identities=16% Similarity=0.168 Sum_probs=50.5
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCccccCCC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 385 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~a 385 (721)
++|.|+|+|-||.++|..|++.| +|++++++.++++...+.+.... ... . .. .+..++-.+.+.++
T Consensus 129 k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~----~~~---~-~~-----~~d~~~~~~~~~~~ 194 (287)
T 1nvt_A 129 KNIVIYGAGGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKL----NKK---F-GE-----EVKFSGLDVDLDGV 194 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHH----TCC---H-HH-----HEEEECTTCCCTTC
T ss_pred CEEEEECchHHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhc----ccc---c-ce-----eEEEeeHHHhhCCC
Confidence 57999999999999999999999 99999999988766544332110 000 0 00 01122113556789
Q ss_pred CEEEEccc
Q 004972 386 DMVIEAVI 393 (721)
Q Consensus 386 DlVIeavp 393 (721)
|+||.+++
T Consensus 195 DilVn~ag 202 (287)
T 1nvt_A 195 DIIINATP 202 (287)
T ss_dssp CEEEECSC
T ss_pred CEEEECCC
Confidence 99999887
No 373
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=95.84 E-value=0.0069 Score=63.36 Aligned_cols=92 Identities=13% Similarity=0.125 Sum_probs=57.1
Q ss_pred ceeEEEEcCCCCcHHHHHHHHHC-CCce-EEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCccc-
Q 004972 305 VRKVAVIGGGLMGSGIATAHILN-NIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE- 381 (721)
Q Consensus 305 ~~kI~VIG~G~mG~~iA~~la~~-G~~V-~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~- 381 (721)
..||+|||+|.||..++..+.+. +.++ .++|++++. .. . . .+..+++++.
T Consensus 3 ~irV~IiG~G~mG~~~~~~l~~~~~~elvav~d~~~~~--~~------------~------------~-gv~~~~d~~~l 55 (320)
T 1f06_A 3 NIRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATL--DT------------K------------T-PVFDVADVDKH 55 (320)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCC--SS------------S------------S-CEEEGGGGGGT
T ss_pred CCEEEEEeecHHHHHHHHHHhcCCCCEEEEEEcCCHHH--hh------------c------------C-CCceeCCHHHH
Confidence 35899999999999999998876 5664 588988653 10 0 0 1344556543
Q ss_pred cCCCCEEEEcccCChHHHHHHHHHHHhhCCCCe-EEEecCCCCCHHHH
Q 004972 382 FKDVDMVIEAVIESVPLKQKIFSELEKACPPHC-ILATNTSTIDLNIV 428 (721)
Q Consensus 382 l~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~-ii~s~ts~~~i~~l 428 (721)
+.++|+||+|+|.... ... +...+..+. +|++.+.+..+.++
T Consensus 56 l~~~DvViiatp~~~h-~~~----~~~al~aG~~Vv~ekp~~~~~~~~ 98 (320)
T 1f06_A 56 ADDVDVLFLCMGSATD-IPE----QAPKFAQFACTVDTYDNHRDIPRH 98 (320)
T ss_dssp TTTCSEEEECSCTTTH-HHH----HHHHHTTTSEEECCCCCGGGHHHH
T ss_pred hcCCCEEEEcCCcHHH-HHH----HHHHHHCCCEEEECCCCcCCHHHH
Confidence 4789999999985543 222 223334444 44443334555444
No 374
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=95.80 E-value=0.027 Score=59.88 Aligned_cols=69 Identities=19% Similarity=0.232 Sum_probs=47.4
Q ss_pred CceeEEEEcCCCCcHH-HHHHHHHC-CCceE-EEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCcc
Q 004972 304 GVRKVAVIGGGLMGSG-IATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS 380 (721)
Q Consensus 304 ~~~kI~VIG~G~mG~~-iA~~la~~-G~~V~-l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~ 380 (721)
++.||+|||+|.||.. .+..+.+. +++|+ ++|+++++++.. .......++++
T Consensus 6 ~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~-------------------------~~~~~~~~~~~ 60 (364)
T 3e82_A 6 NTINIALIGYGFVGKTFHAPLIRSVPGLNLAFVASRDEEKVKRD-------------------------LPDVTVIASPE 60 (364)
T ss_dssp -CEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHHHH-------------------------CTTSEEESCHH
T ss_pred CcceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHhh-------------------------CCCCcEECCHH
Confidence 4568999999999997 66666654 67775 889998764310 11244556663
Q ss_pred -ccC--CCCEEEEcccCChH
Q 004972 381 -EFK--DVDMVIEAVIESVP 397 (721)
Q Consensus 381 -~l~--~aDlVIeavpe~~~ 397 (721)
.++ +.|+|++|+|....
T Consensus 61 ~ll~~~~~D~V~i~tp~~~H 80 (364)
T 3e82_A 61 AAVQHPDVDLVVIASPNATH 80 (364)
T ss_dssp HHHTCTTCSEEEECSCGGGH
T ss_pred HHhcCCCCCEEEEeCChHHH
Confidence 344 78999999995544
No 375
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=95.78 E-value=0.013 Score=58.05 Aligned_cols=38 Identities=16% Similarity=-0.042 Sum_probs=34.6
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHH
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKG 344 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~ 344 (721)
++|.|+|+|.+|..++..|...|+ |+++|++++.++.+
T Consensus 10 ~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~~~~~~ 47 (234)
T 2aef_A 10 RHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKKVL 47 (234)
T ss_dssp CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGGHHHHH
T ss_pred CEEEEECCChHHHHHHHHHHhCCe-EEEEECCHHHHHHH
Confidence 589999999999999999999999 99999999886653
No 376
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=95.75 E-value=0.0056 Score=65.79 Aligned_cols=39 Identities=18% Similarity=0.139 Sum_probs=35.5
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHH
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKG 344 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~ 344 (721)
.+|+|+|+|.+|..+++.+...|.+|+++|+++++.+.+
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~ 211 (384)
T 1l7d_A 173 ARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQV 211 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 589999999999999999999999999999998876654
No 377
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=95.74 E-value=0.023 Score=61.49 Aligned_cols=69 Identities=22% Similarity=0.231 Sum_probs=48.8
Q ss_pred eEEEEcCCCCcHHHHHHHHHC---------CCceE-EEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceec
Q 004972 307 KVAVIGGGLMGSGIATAHILN---------NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGV 376 (721)
Q Consensus 307 kI~VIG~G~mG~~iA~~la~~---------G~~V~-l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~ 376 (721)
||||||+|.||..-+..+.+. +.+|+ ++|++++++++..++ .+.....
T Consensus 28 rvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~~----------------------~~~~~~y 85 (412)
T 4gqa_A 28 NIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAK----------------------LGAEKAY 85 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHHH----------------------HTCSEEE
T ss_pred eEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHHH----------------------cCCCeEE
Confidence 799999999999888887764 33544 889999987765321 1223445
Q ss_pred cCccc-c--CCCCEEEEcccCChH
Q 004972 377 LDYSE-F--KDVDMVIEAVIESVP 397 (721)
Q Consensus 377 ~~~~~-l--~~aDlVIeavpe~~~ 397 (721)
+|++. + .+.|+|++|+|....
T Consensus 86 ~d~~~ll~~~~vD~V~I~tp~~~H 109 (412)
T 4gqa_A 86 GDWRELVNDPQVDVVDITSPNHLH 109 (412)
T ss_dssp SSHHHHHHCTTCCEEEECSCGGGH
T ss_pred CCHHHHhcCCCCCEEEECCCcHHH
Confidence 66633 3 468999999995544
No 378
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=95.70 E-value=0.017 Score=60.50 Aligned_cols=33 Identities=24% Similarity=0.354 Sum_probs=30.2
Q ss_pred eeEEEEcC-CCCcHHHHHHHHHCCC-------ceEEEeCCH
Q 004972 306 RKVAVIGG-GLMGSGIATAHILNNI-------YVVLKEVNS 338 (721)
Q Consensus 306 ~kI~VIG~-G~mG~~iA~~la~~G~-------~V~l~d~~~ 338 (721)
+||.|+|+ |.+|+.++..|+..|+ +|+++|+++
T Consensus 5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~ 45 (327)
T 1y7t_A 5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQ 45 (327)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGG
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCC
Confidence 48999997 9999999999999996 899999975
No 379
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=95.69 E-value=0.027 Score=57.09 Aligned_cols=70 Identities=24% Similarity=0.268 Sum_probs=53.6
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCC-ceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCccccCC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 384 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~ 384 (721)
+++.|+|+|-.+.+++..|++.|. +|++++|+.++++...+.+... ...+......+.+++
T Consensus 126 ~~~lilGaGGaarai~~aL~~~g~~~i~i~nRt~~ra~~la~~~~~~------------------~~~~~~~~~~~~~~~ 187 (269)
T 3tum_A 126 KRALVIGCGGVGSAIAYALAEAGIASITLCDPSTARMGAVCELLGNG------------------FPGLTVSTQFSGLED 187 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHH------------------CTTCEEESCCSCSTT
T ss_pred CeEEEEecHHHHHHHHHHHHHhCCCeEEEeCCCHHHHHHHHHHHhcc------------------CCcceehhhhhhhhc
Confidence 579999999999999999999996 8999999999887764433221 112333444466788
Q ss_pred CCEEEEccc
Q 004972 385 VDMVIEAVI 393 (721)
Q Consensus 385 aDlVIeavp 393 (721)
+|+||.|.|
T Consensus 188 ~dliiNaTp 196 (269)
T 3tum_A 188 FDLVANASP 196 (269)
T ss_dssp CSEEEECSS
T ss_pred ccccccCCc
Confidence 999999987
No 380
>1vrg_A Propionyl-COA carboxylase, beta subunit; TM0716, structural joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE; 2.30A {Thermotoga maritima} SCOP: c.14.1.4 c.14.1.4
Probab=95.65 E-value=0.13 Score=57.12 Aligned_cols=146 Identities=12% Similarity=0.116 Sum_probs=89.0
Q ss_pred EEEEEeCCC-CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccCCCcccccchHHHHHHHHH
Q 004972 15 VAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNL 93 (721)
Q Consensus 15 v~~i~l~~p-~~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (721)
|+++..+-. ..-++.....+.+..+++.+.+.. +-+|.|.-.| |+-+.+-... ...+...+....
T Consensus 100 v~v~a~D~t~~gGS~g~~~~~Ki~r~~e~A~~~~-lPvI~l~dSg-----GAR~qeg~~~-----l~g~~~~~~~~~--- 165 (527)
T 1vrg_A 100 VAVFSQDFTVMGGSLGEMHAKKIVKLLDLALKMG-IPVIGINDSG-----GARIQEGVDA-----LAGYGEIFLRNT--- 165 (527)
T ss_dssp EEEEEECTTTGGGCBCHHHHHHHHHHHHHHHHHT-CCEEEEEEEC-----SBCGGGTHHH-----HHHHHHHHHHHH---
T ss_pred EEEEEEeccccCccccHHHHHHHHHHHHHHHHcC-CCEEEEECCC-----CCCccchhHH-----HHHHHHHHHHHH---
Confidence 444444432 247889999999999999887653 4456665433 3333321110 000111111111
Q ss_pred HhhCCCcEEEEECCcccccchHhhhhcCEEEeeCC-ceEeCcccccCccccccccccccCHHHHHHHHHcCCCcCHH---
Q 004972 94 IEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPK-TQLGLPELTLGVIPGTQRLPRLVGLSKAIEMMLLSKSITSE--- 169 (721)
Q Consensus 94 l~~~~~p~Iaav~G~a~GgG~~lalacD~ria~~~-a~~~~pe~~~Gl~P~~~~l~r~~G~~~a~~l~ltg~~~~a~--- 169 (721)
......|+|++|.|.|.|||......||++|+.++ +.+++. |+.... . .+|+.++.+
T Consensus 166 ~~s~~iP~Isvv~Gp~~GG~a~s~al~D~vi~~~~~a~i~~a-----------------GP~vi~-~-~~ge~v~~e~lg 226 (527)
T 1vrg_A 166 LASGVVPQITVIAGPCAGGAVYSPALTDFIVMVDQTARMFIT-----------------GPNVIK-A-VTGEEISQEDLG 226 (527)
T ss_dssp HHTTTSCEEEEEEEEEBGGGGHHHHHSSEEEEETTTCBCBSS-----------------CHHHHH-H-HHCCCCCHHHHH
T ss_pred HhCCCCCEEEEEeCCCchHHHHHHHcCCeEEEecCceEEEec-----------------CHHHHH-H-HhCCCCCccccc
Confidence 22456999999999999999988889999999987 765543 333222 1 457777764
Q ss_pred --HHH--HcCCccEEcCCc-hHHHHHHHH
Q 004972 170 --EGW--KLGLIDAVVTSE-ELLKVSRLW 193 (721)
Q Consensus 170 --eA~--~~Glv~~vv~~~-~l~~~a~~~ 193 (721)
+.. +.|++|.+++++ ++.+.+.++
T Consensus 227 gae~~~~~~G~vd~vv~d~~~~~~~~~~~ 255 (527)
T 1vrg_A 227 GAMVHNQKSGNAHFLADNDEKAMSLVRTL 255 (527)
T ss_dssp BHHHHHHTSCCCSEEESSHHHHHHHHHHH
T ss_pred cHHHHhhcccceEEEecCHHHHHHHHHHH
Confidence 222 689999999854 444444444
No 381
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=95.60 E-value=0.05 Score=59.52 Aligned_cols=78 Identities=18% Similarity=0.201 Sum_probs=51.6
Q ss_pred CCceeEEEEcCCCCcHHHHHHHHHC-CCce-EEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceecc---
Q 004972 303 RGVRKVAVIGGGLMGSGIATAHILN-NIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL--- 377 (721)
Q Consensus 303 ~~~~kI~VIG~G~mG~~iA~~la~~-G~~V-~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~--- 377 (721)
++..||+|||+|.||...+..+... |.+| .++|+++++++...+.+. +.|. ......+
T Consensus 18 ~~~~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~~~~~~~~~a~~~~-------~~g~----------~~~~~~~~~~ 80 (444)
T 2ixa_A 18 PKKVRIAFIAVGLRGQTHVENMARRDDVEIVAFADPDPYMVGRAQEILK-------KNGK----------KPAKVFGNGN 80 (444)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSCHHHHHHHHHHHH-------HTTC----------CCCEEECSST
T ss_pred CCCceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHHH-------hcCC----------CCCceeccCC
Confidence 3456899999999999999888774 6675 589999998776533211 0110 0123334
Q ss_pred -Cc-cccC--CCCEEEEcccCChH
Q 004972 378 -DY-SEFK--DVDMVIEAVIESVP 397 (721)
Q Consensus 378 -~~-~~l~--~aDlVIeavpe~~~ 397 (721)
++ +.++ +.|+|++|+|....
T Consensus 81 ~~~~~ll~~~~vD~V~i~tp~~~h 104 (444)
T 2ixa_A 81 DDYKNMLKDKNIDAVFVSSPWEWH 104 (444)
T ss_dssp TTHHHHTTCTTCCEEEECCCGGGH
T ss_pred CCHHHHhcCCCCCEEEEcCCcHHH
Confidence 55 3344 68999999995543
No 382
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=95.59 E-value=0.025 Score=61.11 Aligned_cols=42 Identities=21% Similarity=0.199 Sum_probs=36.7
Q ss_pred ceeEEEEcCCCCcHHHHHHHHHCC---CceEEEeCCHHHHHHHHH
Q 004972 305 VRKVAVIGGGLMGSGIATAHILNN---IYVVLKEVNSEYLLKGIK 346 (721)
Q Consensus 305 ~~kI~VIG~G~mG~~iA~~la~~G---~~V~l~d~~~~~~~~~~~ 346 (721)
|+||+|+|+|.+|..++..|++.| .+|+++|+++++++...+
T Consensus 1 M~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~ 45 (405)
T 4ina_A 1 MAKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQ 45 (405)
T ss_dssp -CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHH
Confidence 468999999999999999999998 389999999998877544
No 383
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=95.57 E-value=0.014 Score=62.14 Aligned_cols=71 Identities=13% Similarity=0.111 Sum_probs=47.9
Q ss_pred CCCceeEEEEcCCCCcHH-HHHHHHHC-CCceE-EEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccC
Q 004972 302 PRGVRKVAVIGGGLMGSG-IATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLD 378 (721)
Q Consensus 302 ~~~~~kI~VIG~G~mG~~-iA~~la~~-G~~V~-l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~ 378 (721)
++++.||+|||+|.||.. .+..+.+. +.+|+ ++|++++++.+ ........++
T Consensus 2 ~~~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~-------------------------~~~~~~~~~~ 56 (362)
T 3fhl_A 2 SLEIIKTGLAAFGMSGQVFHAPFISTNPHFELYKIVERSKELSKE-------------------------RYPQASIVRS 56 (362)
T ss_dssp -CCCEEEEESCCSHHHHHTTHHHHHHCTTEEEEEEECSSCCGGGT-------------------------TCTTSEEESC
T ss_pred CCCceEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHH-------------------------hCCCCceECC
Confidence 345578999999999997 66666665 67765 88998765211 1123455667
Q ss_pred cc-ccC--CCCEEEEcccCChH
Q 004972 379 YS-EFK--DVDMVIEAVIESVP 397 (721)
Q Consensus 379 ~~-~l~--~aDlVIeavpe~~~ 397 (721)
++ .++ +.|+|++|+|....
T Consensus 57 ~~~ll~~~~vD~V~i~tp~~~H 78 (362)
T 3fhl_A 57 FKELTEDPEIDLIVVNTPDNTH 78 (362)
T ss_dssp SHHHHTCTTCCEEEECSCGGGH
T ss_pred HHHHhcCCCCCEEEEeCChHHH
Confidence 63 344 48999999995444
No 384
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=95.56 E-value=0.062 Score=52.95 Aligned_cols=39 Identities=18% Similarity=0.035 Sum_probs=35.5
Q ss_pred ceeEEEEcC-CCCcHHHHHHHHHCCCceEEEeCCHHHHHH
Q 004972 305 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLK 343 (721)
Q Consensus 305 ~~kI~VIG~-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~ 343 (721)
-++|.|.|+ |.+|..++..|++.|++|++.+|+++.++.
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~ 60 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPE 60 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHH
T ss_pred CCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHH
Confidence 468999998 999999999999999999999999887654
No 385
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=95.50 E-value=0.0093 Score=61.98 Aligned_cols=41 Identities=15% Similarity=0.251 Sum_probs=35.9
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCC-ceEEEeCC---HHHHHHHHH
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVN---SEYLLKGIK 346 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~-~V~l~d~~---~~~~~~~~~ 346 (721)
+++.|+|+|-+|.+++..|++.|. +|++++|+ .++++...+
T Consensus 155 k~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~ 199 (315)
T 3tnl_A 155 KKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVE 199 (315)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHH
T ss_pred CEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHH
Confidence 589999999999999999999998 89999999 777665443
No 386
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=95.47 E-value=0.01 Score=61.56 Aligned_cols=40 Identities=15% Similarity=0.199 Sum_probs=35.1
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCC-ceEEEeCC---HHHHHHHH
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVN---SEYLLKGI 345 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~-~V~l~d~~---~~~~~~~~ 345 (721)
+++.|+|+|-+|.+++..|++.|. +|++++|+ .++++...
T Consensus 149 k~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la 192 (312)
T 3t4e_A 149 KTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFA 192 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHH
Confidence 589999999999999999999998 89999999 66655543
No 387
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=95.47 E-value=0.049 Score=59.47 Aligned_cols=72 Identities=15% Similarity=0.110 Sum_probs=50.4
Q ss_pred CceeEEEEcC----CCCcHHHHHHHHHC--CCce-EEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceec
Q 004972 304 GVRKVAVIGG----GLMGSGIATAHILN--NIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGV 376 (721)
Q Consensus 304 ~~~kI~VIG~----G~mG~~iA~~la~~--G~~V-~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~ 376 (721)
+..||+|||+ |.||...+..+.+. +++| .++|+++++++...+. -| + ..+...
T Consensus 19 ~~irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~----------~g-~---------~~~~~~ 78 (438)
T 3btv_A 19 APIRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETSIATIQR----------LK-L---------SNATAF 78 (438)
T ss_dssp CCEEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEECSSHHHHHHHHHH----------TT-C---------TTCEEE
T ss_pred CCCEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHH----------cC-C---------Ccceee
Confidence 4468999999 99999999999886 6776 5899999886654221 01 0 012345
Q ss_pred cCccc-c--CCCCEEEEcccCC
Q 004972 377 LDYSE-F--KDVDMVIEAVIES 395 (721)
Q Consensus 377 ~~~~~-l--~~aDlVIeavpe~ 395 (721)
++++. + .++|+|++|+|..
T Consensus 79 ~~~~~ll~~~~vD~V~i~tp~~ 100 (438)
T 3btv_A 79 PTLESFASSSTIDMIVIAIQVA 100 (438)
T ss_dssp SSHHHHHHCSSCSEEEECSCHH
T ss_pred CCHHHHhcCCCCCEEEEeCCcH
Confidence 56633 3 3699999999943
No 388
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=95.43 E-value=0.0061 Score=59.70 Aligned_cols=38 Identities=24% Similarity=0.240 Sum_probs=34.3
Q ss_pred eeEEEEcC-CCCcHHHHHHHHHCCCceEEEeCCHHHHHH
Q 004972 306 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLK 343 (721)
Q Consensus 306 ~kI~VIG~-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~ 343 (721)
+||.|.|+ |.+|+.++..|++.|++|++++|+++.++.
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~ 39 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAAD 39 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccccc
Confidence 37999998 999999999999999999999999887543
No 389
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=95.43 E-value=0.027 Score=58.95 Aligned_cols=35 Identities=17% Similarity=0.132 Sum_probs=32.1
Q ss_pred CceeEEEEcCCCCcHH-HHHHHHHCCCceEEEeCCH
Q 004972 304 GVRKVAVIGGGLMGSG-IATAHILNNIYVVLKEVNS 338 (721)
Q Consensus 304 ~~~kI~VIG~G~mG~~-iA~~la~~G~~V~l~d~~~ 338 (721)
.++||.|||.|-+|.+ +|..|.+.|++|+++|.++
T Consensus 3 ~~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~ 38 (326)
T 3eag_A 3 AMKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKM 38 (326)
T ss_dssp CCCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 4689999999999996 9999999999999999875
No 390
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=95.41 E-value=0.04 Score=53.74 Aligned_cols=39 Identities=8% Similarity=0.251 Sum_probs=34.1
Q ss_pred ceeEEEEcC-CCCcHHHHHHHH-HCCCceEEEeCCHH-HHHH
Q 004972 305 VRKVAVIGG-GLMGSGIATAHI-LNNIYVVLKEVNSE-YLLK 343 (721)
Q Consensus 305 ~~kI~VIG~-G~mG~~iA~~la-~~G~~V~l~d~~~~-~~~~ 343 (721)
|++|.|.|+ |.+|..++..|+ +.|++|++++++++ .++.
T Consensus 5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~ 46 (221)
T 3r6d_A 5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPP 46 (221)
T ss_dssp CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCH
T ss_pred EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchh
Confidence 455999995 999999999999 89999999999988 6443
No 391
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=95.36 E-value=0.04 Score=55.32 Aligned_cols=33 Identities=24% Similarity=0.283 Sum_probs=30.0
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCC-ceEEEeCCH
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNS 338 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~-~V~l~d~~~ 338 (721)
.+|.|||+|-+|+.++..|+..|. +++++|.+.
T Consensus 29 ~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~ 62 (251)
T 1zud_1 29 SQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDD 62 (251)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCB
T ss_pred CcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 489999999999999999999997 789998763
No 392
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=95.30 E-value=0.016 Score=59.10 Aligned_cols=75 Identities=16% Similarity=0.162 Sum_probs=54.4
Q ss_pred eeEEEEcCCC-CcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCccccCC
Q 004972 306 RKVAVIGGGL-MGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 384 (721)
Q Consensus 306 ~kI~VIG~G~-mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~ 384 (721)
+++.|||.|. +|.++|..|...|..|+++++....++. .+.+++
T Consensus 166 k~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~~l~l-----------------------------------~~~~~~ 210 (300)
T 4a26_A 166 KRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTSTEDM-----------------------------------IDYLRT 210 (300)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSCHHHH-----------------------------------HHHHHT
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCCCchh-----------------------------------hhhhcc
Confidence 5899999866 7999999999999999999974332220 023578
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCC
Q 004972 385 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 422 (721)
Q Consensus 385 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~ 422 (721)
||+||-+++-..-+. ..++++++++++..+.
T Consensus 211 ADIVI~Avg~p~~I~-------~~~vk~GavVIDvgi~ 241 (300)
T 4a26_A 211 ADIVIAAMGQPGYVK-------GEWIKEGAAVVDVGTT 241 (300)
T ss_dssp CSEEEECSCCTTCBC-------GGGSCTTCEEEECCCE
T ss_pred CCEEEECCCCCCCCc-------HHhcCCCcEEEEEecc
Confidence 999999998432222 2346889998875543
No 393
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=95.27 E-value=0.011 Score=59.50 Aligned_cols=73 Identities=14% Similarity=0.161 Sum_probs=54.0
Q ss_pred eeEEEEcCC-CCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCccccCC
Q 004972 306 RKVAVIGGG-LMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 384 (721)
Q Consensus 306 ~kI~VIG~G-~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~ 384 (721)
+++.|||.| .+|.++|..|...|..|+++++....++ +.+++
T Consensus 151 k~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t~~L~-------------------------------------~~~~~ 193 (276)
T 3ngx_A 151 NTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKTKDIG-------------------------------------SMTRS 193 (276)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCHH-------------------------------------HHHHH
T ss_pred CEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCcccHH-------------------------------------Hhhcc
Confidence 589999987 5899999999999999999986432211 34678
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCC
Q 004972 385 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 422 (721)
Q Consensus 385 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~ 422 (721)
||+||-+++-..-++ ..++++++++++..+.
T Consensus 194 ADIVI~Avg~p~~I~-------~~~vk~GavVIDvgi~ 224 (276)
T 3ngx_A 194 SKIVVVAVGRPGFLN-------REMVTPGSVVIDVGIN 224 (276)
T ss_dssp SSEEEECSSCTTCBC-------GGGCCTTCEEEECCCE
T ss_pred CCEEEECCCCCcccc-------HhhccCCcEEEEeccC
Confidence 999999997422222 2456889988876554
No 394
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=95.25 E-value=0.065 Score=56.36 Aligned_cols=72 Identities=13% Similarity=-0.040 Sum_probs=50.9
Q ss_pred CceeEEEEcCC-CCcHHHHHHHHHC--CCce-EEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc
Q 004972 304 GVRKVAVIGGG-LMGSGIATAHILN--NIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 379 (721)
Q Consensus 304 ~~~kI~VIG~G-~mG~~iA~~la~~--G~~V-~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~ 379 (721)
+..||+|||+| .||...+..+.+. +.+| .++|+++++++...++ .+.....+|+
T Consensus 17 ~~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~----------------------~~~~~~~~~~ 74 (340)
T 1zh8_A 17 RKIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKM----------------------VGNPAVFDSY 74 (340)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHH----------------------HSSCEEESCH
T ss_pred CceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcCCHHHHHHHHHH----------------------hCCCcccCCH
Confidence 34589999999 8999999988876 4565 5899999987654321 1222445666
Q ss_pred cc-c--CCCCEEEEcccCChH
Q 004972 380 SE-F--KDVDMVIEAVIESVP 397 (721)
Q Consensus 380 ~~-l--~~aDlVIeavpe~~~ 397 (721)
+. + .+.|+|++|+|....
T Consensus 75 ~~ll~~~~vD~V~i~tp~~~H 95 (340)
T 1zh8_A 75 EELLESGLVDAVDLTLPVELN 95 (340)
T ss_dssp HHHHHSSCCSEEEECCCGGGH
T ss_pred HHHhcCCCCCEEEEeCCchHH
Confidence 43 3 368999999995443
No 395
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=95.19 E-value=0.03 Score=54.37 Aligned_cols=38 Identities=24% Similarity=0.218 Sum_probs=34.1
Q ss_pred eeEEEEcC-CCCcHHHHHHHHHCCCceEEEeCCHHHHHH
Q 004972 306 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLK 343 (721)
Q Consensus 306 ~kI~VIG~-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~ 343 (721)
+||.|.|+ |.+|+.++..|++.|++|++++|+++.++.
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~ 39 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQ 39 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHH
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhh
Confidence 47999996 999999999999999999999999877543
No 396
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=95.17 E-value=0.026 Score=62.07 Aligned_cols=41 Identities=15% Similarity=0.137 Sum_probs=36.1
Q ss_pred CceeEEEEcCCCCcHHHHHHHHHC-CCceEEEeCCHHHHHHH
Q 004972 304 GVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKG 344 (721)
Q Consensus 304 ~~~kI~VIG~G~mG~~iA~~la~~-G~~V~l~d~~~~~~~~~ 344 (721)
.+++|.|+|+|.+|.+++..|++. |++|+++||++++++..
T Consensus 22 ~~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~~~ka~~l 63 (467)
T 2axq_A 22 MGKNVLLLGSGFVAQPVIDTLAANDDINVTVACRTLANAQAL 63 (467)
T ss_dssp -CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEESSHHHHHHH
T ss_pred CCCEEEEECChHHHHHHHHHHHhCCCCeEEEEECCHHHHHHH
Confidence 467899999999999999999998 78999999999876653
No 397
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=95.11 E-value=0.046 Score=58.67 Aligned_cols=69 Identities=16% Similarity=0.044 Sum_probs=49.2
Q ss_pred eeEEEEcCC-CCcHHHHHHHHHC-CCceE-EEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCccc-
Q 004972 306 RKVAVIGGG-LMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE- 381 (721)
Q Consensus 306 ~kI~VIG~G-~mG~~iA~~la~~-G~~V~-l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~- 381 (721)
.||+|||+| .||...+..+.+. +.+|+ ++|+++++++...+. . .+...++++.
T Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~----------------------~-g~~~~~~~~el 59 (387)
T 3moi_A 3 IRFGICGLGFAGSVLMAPAMRHHPDAQIVAACDPNEDVRERFGKE----------------------Y-GIPVFATLAEM 59 (387)
T ss_dssp EEEEEECCSHHHHTTHHHHHHHCTTEEEEEEECSCHHHHHHHHHH----------------------H-TCCEESSHHHH
T ss_pred eEEEEEeCCHHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHH----------------------c-CCCeECCHHHH
Confidence 589999999 9999999988875 56655 899999887654221 0 1334556633
Q ss_pred c--CCCCEEEEcccCChH
Q 004972 382 F--KDVDMVIEAVIESVP 397 (721)
Q Consensus 382 l--~~aDlVIeavpe~~~ 397 (721)
+ .++|+|++|+|....
T Consensus 60 l~~~~vD~V~i~tp~~~H 77 (387)
T 3moi_A 60 MQHVQMDAVYIASPHQFH 77 (387)
T ss_dssp HHHSCCSEEEECSCGGGH
T ss_pred HcCCCCCEEEEcCCcHHH
Confidence 3 369999999995443
No 398
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=95.10 E-value=0.013 Score=57.35 Aligned_cols=78 Identities=22% Similarity=0.201 Sum_probs=47.2
Q ss_pred eeEEEEcCCCCcHHHHHH--HHHCCCceE-EEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cc
Q 004972 306 RKVAVIGGGLMGSGIATA--HILNNIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SE 381 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~--la~~G~~V~-l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~ 381 (721)
.+|+|||+|.+|..++.. +...|++++ ++|.+++..... -.| -.+...+++ +.
T Consensus 86 ~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~dp~k~g~~------------i~g-----------v~V~~~~dl~el 142 (215)
T 2vt3_A 86 TDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDINESKIGTE------------VGG-----------VPVYNLDDLEQH 142 (215)
T ss_dssp -CEEEECCSHHHHHHHHCC------CCEEEEEESCTTTTTCE------------ETT-----------EEEEEGGGHHHH
T ss_pred CEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeCCHHHHHhH------------hcC-----------CeeechhhHHHH
Confidence 479999999999999994 445577655 899998763321 000 012234455 33
Q ss_pred cCCCCEEEEcccCChHHHHHHHHHHHh
Q 004972 382 FKDVDMVIEAVIESVPLKQKIFSELEK 408 (721)
Q Consensus 382 l~~aDlVIeavpe~~~~k~~v~~~l~~ 408 (721)
+++.|.||+|+| ....+++...+..
T Consensus 143 i~~~D~ViIAvP--s~~~~ei~~~l~~ 167 (215)
T 2vt3_A 143 VKDESVAILTVP--AVAAQSITDRLVA 167 (215)
T ss_dssp CSSCCEEEECSC--HHHHHHHHHHHHH
T ss_pred HHhCCEEEEecC--chhHHHHHHHHHH
Confidence 444599999999 5445566666544
No 399
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=95.09 E-value=0.077 Score=55.76 Aligned_cols=109 Identities=12% Similarity=0.128 Sum_probs=59.4
Q ss_pred ceeEEEEcCCCCcHHHHHHHHHC-CCceE-EEeCCHHHHHHHHHHHHHHHHhhhhcCCC-CHHHH-HHhhcCceeccCc-
Q 004972 305 VRKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKL-TQDKA-NNALKMLKGVLDY- 379 (721)
Q Consensus 305 ~~kI~VIG~G~mG~~iA~~la~~-G~~V~-l~d~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~-~~~~~~i~~~~~~- 379 (721)
|.||||+|+|.+|..+++.+..+ +++|+ +.|.+++......+. +...-.|.. ...+. ...-+.+....+.
T Consensus 2 mikVgI~G~G~IGr~v~r~l~~~~~~evvaV~d~~~~~~~~l~~~-----dg~s~~g~~~~~~~v~~~~~~~l~v~~~~~ 76 (343)
T 2yyy_A 2 PAKVLINGYGSIGKRVADAVSMQDDMEVIGVTKTKPDFEARLAVE-----KGYKLFVAIPDNERVKLFEDAGIPVEGTIL 76 (343)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHSSSEEEEEEEESSCSHHHHHHHH-----TTCCEEESSCCHHHHHHHHHTTCCCCCBGG
T ss_pred ceEEEEECCCHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHh-----cCCccccccCCCceeecccCCeEEECCchH
Confidence 35899999999999999999876 56765 556655544332210 000111221 11111 1111123333333
Q ss_pred cccCCCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCC
Q 004972 380 SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 422 (721)
Q Consensus 380 ~~l~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~ 422 (721)
+.+.++|+|++|.|..... +... ..+++.++.++++.+.
T Consensus 77 ~~~~~vDiV~eatg~~~s~--~~a~--~~~l~aG~~VI~sap~ 115 (343)
T 2yyy_A 77 DIIEDADIVVDGAPKKIGK--QNLE--NIYKPHKVKAILQGGE 115 (343)
T ss_dssp GTGGGCSEEEECCCTTHHH--HHHH--HTTTTTTCEEEECTTS
T ss_pred HhccCCCEEEECCCccccH--HHHH--HHHHHCCCEEEECCCc
Confidence 3447999999999844422 2211 3566777766665543
No 400
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=95.07 E-value=0.024 Score=57.82 Aligned_cols=73 Identities=19% Similarity=0.199 Sum_probs=54.2
Q ss_pred eeEEEEcCCC-CcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCccccCC
Q 004972 306 RKVAVIGGGL-MGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 384 (721)
Q Consensus 306 ~kI~VIG~G~-mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~ 384 (721)
+++.|||.|. +|..+|..|...|..|+++++....+. +.+++
T Consensus 166 k~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~-------------------------------------~~~~~ 208 (301)
T 1a4i_A 166 RHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLD-------------------------------------EEVNK 208 (301)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHH-------------------------------------HHHTT
T ss_pred CEEEEECCCchHHHHHHHHHHhCCCeEEEEECCcccHH-------------------------------------HHhcc
Confidence 5899999995 799999999999999999985422211 44688
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCC
Q 004972 385 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 422 (721)
Q Consensus 385 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~ 422 (721)
||+||-|++-.--++. .++++++++++....
T Consensus 209 ADIVI~Avg~p~~I~~-------~~vk~GavVIDVgi~ 239 (301)
T 1a4i_A 209 GDILVVATGQPEMVKG-------EWIKPGAIVIDCGIN 239 (301)
T ss_dssp CSEEEECCCCTTCBCG-------GGSCTTCEEEECCCB
T ss_pred CCEEEECCCCcccCCH-------HHcCCCcEEEEccCC
Confidence 9999999974322222 346789998876553
No 401
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=95.03 E-value=0.078 Score=58.82 Aligned_cols=37 Identities=24% Similarity=0.328 Sum_probs=32.3
Q ss_pred CCceeEEEEcCCCCcHH-HHHHHHHCCCceEEEeCCHH
Q 004972 303 RGVRKVAVIGGGLMGSG-IATAHILNNIYVVLKEVNSE 339 (721)
Q Consensus 303 ~~~~kI~VIG~G~mG~~-iA~~la~~G~~V~l~d~~~~ 339 (721)
..+++|.|||.|-.|.+ +|..|.+.|++|+++|..+.
T Consensus 20 ~~~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~~ 57 (494)
T 4hv4_A 20 RRVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPN 57 (494)
T ss_dssp --CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSCC
T ss_pred ccCCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCCC
Confidence 45789999999999986 99999999999999998754
No 402
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=94.98 E-value=0.15 Score=52.18 Aligned_cols=95 Identities=16% Similarity=0.189 Sum_probs=63.5
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceec-cCccc--c
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGV-LDYSE--F 382 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~-~~~~~--l 382 (721)
.+|..||+|..|.+........|.+|+.+|++++.++.+++.+.+. |. .++++. .|... -
T Consensus 124 ~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~-------gl----------~~v~~v~gDa~~l~d 186 (298)
T 3fpf_A 124 ERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGL-------GV----------DGVNVITGDETVIDG 186 (298)
T ss_dssp CEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHH-------TC----------CSEEEEESCGGGGGG
T ss_pred CEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhc-------CC----------CCeEEEECchhhCCC
Confidence 5899999999765433322235889999999999999887654321 10 123321 11111 2
Q ss_pred CCCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEec
Q 004972 383 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATN 419 (721)
Q Consensus 383 ~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ 419 (721)
...|+|+.+.. ..-+..+++++.+.++|+..++..
T Consensus 187 ~~FDvV~~~a~--~~d~~~~l~el~r~LkPGG~Lvv~ 221 (298)
T 3fpf_A 187 LEFDVLMVAAL--AEPKRRVFRNIHRYVDTETRIIYR 221 (298)
T ss_dssp CCCSEEEECTT--CSCHHHHHHHHHHHCCTTCEEEEE
T ss_pred CCcCEEEECCC--ccCHHHHHHHHHHHcCCCcEEEEE
Confidence 46899997654 455678999999999988776643
No 403
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=94.96 E-value=0.047 Score=57.22 Aligned_cols=100 Identities=17% Similarity=0.205 Sum_probs=61.1
Q ss_pred ceeEEEEcC-CCCcHHHHHHHHHC-CCceEEEeCCH---HHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceecc--
Q 004972 305 VRKVAVIGG-GLMGSGIATAHILN-NIYVVLKEVNS---EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL-- 377 (721)
Q Consensus 305 ~~kI~VIG~-G~mG~~iA~~la~~-G~~V~l~d~~~---~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~-- 377 (721)
|.||+|+|+ |.+|..+...|.++ .++++.+..+. ..-+.. ......+ .+. ..+.+..
T Consensus 4 M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~----~~~~p~~--~~~----------~~~~v~~~~ 67 (337)
T 3dr3_A 4 MLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLI----SDLHPQL--KGI----------VELPLQPMS 67 (337)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBH----HHHCGGG--TTT----------CCCBEEEES
T ss_pred ceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCch----HHhCccc--cCc----------cceeEeccC
Confidence 579999995 99999999999884 56777665443 211111 0000000 010 0122222
Q ss_pred Ccccc-CCCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCH
Q 004972 378 DYSEF-KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL 425 (721)
Q Consensus 378 ~~~~l-~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i 425 (721)
+.+.+ +++|+||+|+| ...-+++..++ +..++.++++++....
T Consensus 68 ~~~~~~~~~Dvvf~a~p--~~~s~~~~~~~---~~~g~~vIDlSa~fR~ 111 (337)
T 3dr3_A 68 DISEFSPGVDVVFLATA--HEVSHDLAPQF---LEAGCVVFDLSGAFRV 111 (337)
T ss_dssp SGGGTCTTCSEEEECSC--HHHHHHHHHHH---HHTTCEEEECSSTTSS
T ss_pred CHHHHhcCCCEEEECCC--hHHHHHHHHHH---HHCCCEEEEcCCcccc
Confidence 34455 89999999999 55555555554 3467888899987644
No 404
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=94.90 E-value=0.063 Score=57.80 Aligned_cols=75 Identities=19% Similarity=0.166 Sum_probs=50.4
Q ss_pred CCceeEEEEcCCC---CcHHHHHHHHHCC-CceE--EEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceec
Q 004972 303 RGVRKVAVIGGGL---MGSGIATAHILNN-IYVV--LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGV 376 (721)
Q Consensus 303 ~~~~kI~VIG~G~---mG~~iA~~la~~G-~~V~--l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~ 376 (721)
|+..||||||+|. ||...+..+...+ ++|+ ++|+++++++...++ -| +. .....
T Consensus 10 m~~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~----------~g-~~---------~~~~~ 69 (398)
T 3dty_A 10 PQPIRWAMVGGGSQSQIGYIHRCAALRDNTFVLVAGAFDIDPIRGSAFGEQ----------LG-VD---------SERCY 69 (398)
T ss_dssp CSCEEEEEEECCTTCSSHHHHHHHHHGGGSEEEEEEECCSSHHHHHHHHHH----------TT-CC---------GGGBC
T ss_pred cCcceEEEEcCCccchhHHHHHHHHhhCCCeEEEEEEeCCCHHHHHHHHHH----------hC-CC---------cceee
Confidence 3456899999999 9999988887665 6776 579999987664321 01 00 01334
Q ss_pred cCccc-cC-------CCCEEEEcccCChH
Q 004972 377 LDYSE-FK-------DVDMVIEAVIESVP 397 (721)
Q Consensus 377 ~~~~~-l~-------~aDlVIeavpe~~~ 397 (721)
++++. ++ +.|+|++|+|....
T Consensus 70 ~~~~~ll~~~~~~~~~vD~V~i~tp~~~H 98 (398)
T 3dty_A 70 ADYLSMFEQEARRADGIQAVSIATPNGTH 98 (398)
T ss_dssp SSHHHHHHHHTTCTTCCSEEEEESCGGGH
T ss_pred CCHHHHHhcccccCCCCCEEEECCCcHHH
Confidence 55533 33 48999999995544
No 405
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=94.88 E-value=0.033 Score=49.19 Aligned_cols=81 Identities=9% Similarity=-0.017 Sum_probs=59.3
Q ss_pred ceeEEEEcC----CCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCcc
Q 004972 305 VRKVAVIGG----GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS 380 (721)
Q Consensus 305 ~~kI~VIG~----G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~ 380 (721)
.++|+|||+ +.+|..+...|.+.|++|+.++...+.+ .......+++
T Consensus 4 p~siAVVGaS~~~~~~g~~v~~~L~~~g~~V~pVnP~~~~i-----------------------------~G~~~y~sl~ 54 (122)
T 3ff4_A 4 MKKTLILGATPETNRYAYLAAERLKSHGHEFIPVGRKKGEV-----------------------------LGKTIINERP 54 (122)
T ss_dssp CCCEEEETCCSCTTSHHHHHHHHHHHHTCCEEEESSSCSEE-----------------------------TTEECBCSCC
T ss_pred CCEEEEEccCCCCCCHHHHHHHHHHHCCCeEEEECCCCCcC-----------------------------CCeeccCChH
Confidence 478999998 5679999999999999999988754321 1244455666
Q ss_pred ccCCCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEE
Q 004972 381 EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 417 (721)
Q Consensus 381 ~l~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~ 417 (721)
++.+.|+++.++| .+...++++++.+.- ...+++
T Consensus 55 dlp~vDlavi~~p--~~~v~~~v~e~~~~g-~k~v~~ 88 (122)
T 3ff4_A 55 VIEGVDTVTLYIN--PQNQLSEYNYILSLK-PKRVIF 88 (122)
T ss_dssp CCTTCCEEEECSC--HHHHGGGHHHHHHHC-CSEEEE
T ss_pred HCCCCCEEEEEeC--HHHHHHHHHHHHhcC-CCEEEE
Confidence 6655999999999 777778888876652 335554
No 406
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=94.87 E-value=0.077 Score=58.60 Aligned_cols=74 Identities=20% Similarity=0.156 Sum_probs=51.0
Q ss_pred CCceeEEEEcC----CCCcHHHHHHHHHC--CCceE-EEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCcee
Q 004972 303 RGVRKVAVIGG----GLMGSGIATAHILN--NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG 375 (721)
Q Consensus 303 ~~~~kI~VIG~----G~mG~~iA~~la~~--G~~V~-l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 375 (721)
|+..||+|||+ |.||...+..+.+. +++|+ ++|+++++++...+. -| + .....
T Consensus 37 m~~irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d~~~~~a~~~a~~----------~g-~---------~~~~~ 96 (479)
T 2nvw_A 37 SRPIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQ----------LQ-L---------KHATG 96 (479)
T ss_dssp GCCEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHH----------TT-C---------TTCEE
T ss_pred CCcCEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHH----------cC-C---------Cccee
Confidence 34468999999 99999999999885 67764 899999887654321 01 0 01234
Q ss_pred ccCccc-c--CCCCEEEEcccCCh
Q 004972 376 VLDYSE-F--KDVDMVIEAVIESV 396 (721)
Q Consensus 376 ~~~~~~-l--~~aDlVIeavpe~~ 396 (721)
.++++. + .++|+|++|+|...
T Consensus 97 ~~d~~ell~~~~vD~V~I~tp~~~ 120 (479)
T 2nvw_A 97 FDSLESFAQYKDIDMIVVSVKVPE 120 (479)
T ss_dssp ESCHHHHHHCTTCSEEEECSCHHH
T ss_pred eCCHHHHhcCCCCCEEEEcCCcHH
Confidence 556633 4 47999999999433
No 407
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=94.80 E-value=0.027 Score=57.07 Aligned_cols=73 Identities=16% Similarity=0.163 Sum_probs=54.1
Q ss_pred eeEEEEcCCC-CcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCccccCC
Q 004972 306 RKVAVIGGGL-MGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 384 (721)
Q Consensus 306 ~kI~VIG~G~-mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~ 384 (721)
+++.|||.|. +|.++|..|...|..|+++++....++ +.+++
T Consensus 161 k~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t~~L~-------------------------------------~~~~~ 203 (285)
T 3p2o_A 161 KDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLS-------------------------------------LYTRQ 203 (285)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCHH-------------------------------------HHHTT
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCchhHH-------------------------------------HHhhc
Confidence 5899999876 699999999999999999986432211 34688
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCC
Q 004972 385 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 422 (721)
Q Consensus 385 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~ 422 (721)
||+||-+++-.--++ .+.+++++++++....
T Consensus 204 ADIVI~Avg~p~~I~-------~~~vk~GavVIDVgi~ 234 (285)
T 3p2o_A 204 ADLIIVAAGCVNLLR-------SDMVKEGVIVVDVGIN 234 (285)
T ss_dssp CSEEEECSSCTTCBC-------GGGSCTTEEEEECCCE
T ss_pred CCEEEECCCCCCcCC-------HHHcCCCeEEEEeccC
Confidence 999999997322222 2456889988875543
No 408
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=94.73 E-value=0.06 Score=56.91 Aligned_cols=69 Identities=13% Similarity=0.168 Sum_probs=47.9
Q ss_pred ceeEEEEcCCCCcHH-HHHHHHHC-CCceE-EEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCccc
Q 004972 305 VRKVAVIGGGLMGSG-IATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE 381 (721)
Q Consensus 305 ~~kI~VIG~G~mG~~-iA~~la~~-G~~V~-l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 381 (721)
..||+|||+|.||.. .+..+.+. +.+|+ ++|+++++++. . .......++++.
T Consensus 7 ~~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d~~~~~~~~-------------~------------~~~~~~~~~~~~ 61 (352)
T 3kux_A 7 KIKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSSDASKVHA-------------D------------WPAIPVVSDPQM 61 (352)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHHT-------------T------------CSSCCEESCHHH
T ss_pred CceEEEECCCHHHHHHHHHHHhhCCCcEEEEEECCCHHHHHh-------------h------------CCCCceECCHHH
Confidence 358999999999997 67777665 67765 89999876431 0 112344566633
Q ss_pred -c--CCCCEEEEcccCChHH
Q 004972 382 -F--KDVDMVIEAVIESVPL 398 (721)
Q Consensus 382 -l--~~aDlVIeavpe~~~~ 398 (721)
+ .+.|+|++|+|.....
T Consensus 62 ll~~~~vD~V~i~tp~~~H~ 81 (352)
T 3kux_A 62 LFNDPSIDLIVIPTPNDTHF 81 (352)
T ss_dssp HHHCSSCCEEEECSCTTTHH
T ss_pred HhcCCCCCEEEEeCChHHHH
Confidence 3 3599999999966553
No 409
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=94.72 E-value=0.052 Score=56.35 Aligned_cols=36 Identities=19% Similarity=0.319 Sum_probs=28.8
Q ss_pred ceeEEEEcCCCCcHHHHHHHHH--CCCc-eEEEeCCHHH
Q 004972 305 VRKVAVIGGGLMGSGIATAHIL--NNIY-VVLKEVNSEY 340 (721)
Q Consensus 305 ~~kI~VIG~G~mG~~iA~~la~--~G~~-V~l~d~~~~~ 340 (721)
..||+|||+|.||..++..+.+ .+.+ |.++|+++++
T Consensus 4 ~irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~ 42 (312)
T 1nvm_B 4 KLKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAAS 42 (312)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTC
T ss_pred CCEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhh
Confidence 3589999999999999999865 3555 4578998775
No 410
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=94.72 E-value=0.024 Score=58.67 Aligned_cols=91 Identities=18% Similarity=0.062 Sum_probs=59.0
Q ss_pred eeEEEEcCCCC-cHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCcee-----c--c
Q 004972 306 RKVAVIGGGLM-GSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG-----V--L 377 (721)
Q Consensus 306 ~kI~VIG~G~m-G~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~-----~--~ 377 (721)
+++.|||.|.| |..+|..|...|..|+++|++..++.. +...-. . ..... + .
T Consensus 178 k~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~--------------ra~~la----~--~~~~~t~~~~t~~~ 237 (320)
T 1edz_A 178 KKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFT--------------RGESLK----L--NKHHVEDLGEYSED 237 (320)
T ss_dssp CEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEE--------------SCCCSS----C--CCCEEEEEEECCHH
T ss_pred CEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHh--------------HHHHHh----h--hcccccccccccHh
Confidence 68999999976 999999999999999999998432110 000000 0 00111 1 3
Q ss_pred Cc-cccCCCCEEEEcccCChH-HHHHHHHHHHhhCCCCeEEEecCCCC
Q 004972 378 DY-SEFKDVDMVIEAVIESVP-LKQKIFSELEKACPPHCILATNTSTI 423 (721)
Q Consensus 378 ~~-~~l~~aDlVIeavpe~~~-~k~~v~~~l~~~~~~~~ii~s~ts~~ 423 (721)
++ +.+++||+||-|++-.-- +.. ..+++++++++.++.-
T Consensus 238 ~L~e~l~~ADIVIsAtg~p~~vI~~-------e~vk~GavVIDVgi~r 278 (320)
T 1edz_A 238 LLKKCSLDSDVVITGVPSENYKFPT-------EYIKEGAVCINFACTK 278 (320)
T ss_dssp HHHHHHHHCSEEEECCCCTTCCBCT-------TTSCTTEEEEECSSSC
T ss_pred HHHHHhccCCEEEECCCCCcceeCH-------HHcCCCeEEEEcCCCc
Confidence 44 567899999999973221 222 2357889888877654
No 411
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=94.65 E-value=0.099 Score=57.29 Aligned_cols=35 Identities=20% Similarity=0.121 Sum_probs=32.3
Q ss_pred ceeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHH
Q 004972 305 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSE 339 (721)
Q Consensus 305 ~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~ 339 (721)
-+||.|||.|..|.+.|..|.+.|++|+++|.++.
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~ 43 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPF 43 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCG
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcc
Confidence 47899999999999999999999999999999653
No 412
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=94.64 E-value=0.03 Score=56.71 Aligned_cols=73 Identities=14% Similarity=0.086 Sum_probs=53.5
Q ss_pred eeEEEEcCCC-CcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCccccCC
Q 004972 306 RKVAVIGGGL-MGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 384 (721)
Q Consensus 306 ~kI~VIG~G~-mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~ 384 (721)
+++.|||.|. +|.++|..|...|..|++.++....++ +.+++
T Consensus 162 k~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~-------------------------------------~~~~~ 204 (285)
T 3l07_A 162 AYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDLK-------------------------------------SHTTK 204 (285)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHH-------------------------------------HHHTT
T ss_pred CEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchhHH-------------------------------------Hhccc
Confidence 5899999876 799999999999999999976422111 34688
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCC
Q 004972 385 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 422 (721)
Q Consensus 385 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~ 422 (721)
||+||-+++-..-++ ...+++++++++....
T Consensus 205 ADIVI~Avg~p~~I~-------~~~vk~GavVIDvgi~ 235 (285)
T 3l07_A 205 ADILIVAVGKPNFIT-------ADMVKEGAVVIDVGIN 235 (285)
T ss_dssp CSEEEECCCCTTCBC-------GGGSCTTCEEEECCCE
T ss_pred CCEEEECCCCCCCCC-------HHHcCCCcEEEEeccc
Confidence 999999997322222 2456889988875543
No 413
>3k8x_A Acetyl-COA carboxylase; transferase, carboxyltransferase, AC tepraloxydim, ATP-binding, biotin, fatty acid biosynthesis; HET: B89; 2.30A {Saccharomyces cerevisiae} PDB: 1w2x_A* 3h0s_A* 3h0j_A* 3h0q_A* 1od2_A* 1od4_A* 3pgq_A* 3tvu_A* 3tv5_A* 3tvw_A* 3tz3_A* 1uyr_A* 1uys_A* 1uyt_A 1uyv_A
Probab=94.62 E-value=0.077 Score=60.45 Aligned_cols=82 Identities=11% Similarity=0.073 Sum_probs=57.9
Q ss_pred CCCcEEEEECCcccccchHhhhhcCEEEeeCCceEeCcccccCccccccccccccCHHHHHHHHHcCCCc--CHHH----
Q 004972 97 CKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGTQRLPRLVGLSKAIEMMLLSKSI--TSEE---- 170 (721)
Q Consensus 97 ~~~p~Iaav~G~a~GgG~~lalacD~ria~~~a~~~~pe~~~Gl~P~~~~l~r~~G~~~a~~l~ltg~~~--~a~e---- 170 (721)
...|+|++|.|.|.|||..+...||++|+.+++.+.+. |+..... .+|+.+ +.++
T Consensus 245 ~~IPqIsvV~G~c~GGgAY~paL~D~vImv~~s~iflt-----------------GP~vIk~--~tGeeV~~s~eeLGGA 305 (758)
T 3k8x_A 245 HDIFTITLVTCRSVGIGAYLVRLGQRAIQVEGQPIILT-----------------GAPAINK--MLGREVYTSNLQLGGT 305 (758)
T ss_dssp TTSCEEEEECSCEETHHHHHHHHTCEEEEETTCCEESS-----------------CHHHHHH--HHTSCCCSCTHHHHSH
T ss_pred cCCCEEEEEccCCchHHHHHHhhCCEEEEECCceEEEe-----------------CHHHHHH--HhCCccccCchhcchh
Confidence 46899999999999999999999999999988755443 3332222 266665 4433
Q ss_pred --HHHcCCccEEcCCchHHHHHHHHHHHHHhc
Q 004972 171 --GWKLGLIDAVVTSEELLKVSRLWALDIAAR 200 (721)
Q Consensus 171 --A~~~Glv~~vv~~~~l~~~a~~~a~~~a~~ 200 (721)
-...|++|.+++.|+ ++.+.++++.+.
T Consensus 306 ~vh~~sGvad~va~dd~---eal~~ir~lLsy 334 (758)
T 3k8x_A 306 QIMYNNGVSHLTAVDDL---AGVEKIVEWMSY 334 (758)
T ss_dssp HHHTTTTSSSEEESSHH---HHHHHHHHHHTT
T ss_pred hHHHhcCCeeEEecCHH---HHHHHHHHHHhh
Confidence 236899999997653 445555555543
No 414
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=94.60 E-value=0.018 Score=58.35 Aligned_cols=73 Identities=15% Similarity=0.134 Sum_probs=53.8
Q ss_pred eeEEEEcCCC-CcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCccccCC
Q 004972 306 RKVAVIGGGL-MGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 384 (721)
Q Consensus 306 ~kI~VIG~G~-mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~ 384 (721)
+++.|||.|. .|..+|..|...|..|+++++....+. +.+++
T Consensus 160 k~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~-------------------------------------~~~~~ 202 (288)
T 1b0a_A 160 LNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLR-------------------------------------HHVEN 202 (288)
T ss_dssp CEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHH-------------------------------------HHHHH
T ss_pred CEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCchhHH-------------------------------------HHhcc
Confidence 5899999996 699999999999999999985543222 33577
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCC
Q 004972 385 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 422 (721)
Q Consensus 385 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~ 422 (721)
||+||-+++..--++. .++++++++++....
T Consensus 203 ADIVI~Avg~p~lI~~-------~~vk~GavVIDVgi~ 233 (288)
T 1b0a_A 203 ADLLIVAVGKPGFIPG-------DWIKEGAIVIDVGIN 233 (288)
T ss_dssp CSEEEECSCCTTCBCT-------TTSCTTCEEEECCCE
T ss_pred CCEEEECCCCcCcCCH-------HHcCCCcEEEEccCC
Confidence 9999999973322222 235788888875543
No 415
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=94.53 E-value=0.03 Score=57.46 Aligned_cols=34 Identities=24% Similarity=0.309 Sum_probs=31.4
Q ss_pred eeEEEEcC-CCCcHHHHHHHHHCCCceEEEeCCHH
Q 004972 306 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSE 339 (721)
Q Consensus 306 ~kI~VIG~-G~mG~~iA~~la~~G~~V~l~d~~~~ 339 (721)
|||.|.|+ |.+|+.++..|.+.||+|++..|+++
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~ 35 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPG 35 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 57999998 99999999999999999999998764
No 416
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=94.51 E-value=0.014 Score=57.81 Aligned_cols=40 Identities=13% Similarity=0.189 Sum_probs=34.5
Q ss_pred CCCceeEEEEcC-CCCcHHHHHHHHHCC-CceEEEeCCHHHH
Q 004972 302 PRGVRKVAVIGG-GLMGSGIATAHILNN-IYVVLKEVNSEYL 341 (721)
Q Consensus 302 ~~~~~kI~VIG~-G~mG~~iA~~la~~G-~~V~l~d~~~~~~ 341 (721)
++.|++|.|.|+ |.+|..++..|++.| ++|++++|+++.+
T Consensus 20 ~~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~ 61 (236)
T 3qvo_A 20 QGHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKI 61 (236)
T ss_dssp --CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGS
T ss_pred cCcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhh
Confidence 455789999995 999999999999999 8999999998753
No 417
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=94.47 E-value=0.081 Score=55.53 Aligned_cols=37 Identities=22% Similarity=0.400 Sum_probs=28.6
Q ss_pred eeEEEEcCCCCcHHHHHHHHHC-CCceE-EEeCCHHHHH
Q 004972 306 RKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLL 342 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~-G~~V~-l~d~~~~~~~ 342 (721)
.||||+|+|.||..+++.+.++ +++|+ +.|++++...
T Consensus 2 ikVgIiGaG~iG~~l~r~L~~~~~~elvav~d~~~~~~~ 40 (337)
T 1cf2_P 2 KAVAINGYGTVGKRVADAIAQQDDMKVIGVSKTRPDFEA 40 (337)
T ss_dssp EEEEEECCSTTHHHHHHHHHTSSSEEEEEEEESSCSHHH
T ss_pred eEEEEEeECHHHHHHHHHHHcCCCcEEEEEEcCChhHHH
Confidence 5899999999999999999874 55664 4677655433
No 418
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=94.45 E-value=0.026 Score=55.20 Aligned_cols=37 Identities=24% Similarity=0.429 Sum_probs=33.9
Q ss_pred ceeEEEEcC-CCCcHHHHHHHHHCCCceEEEeCCHHHH
Q 004972 305 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYL 341 (721)
Q Consensus 305 ~~kI~VIG~-G~mG~~iA~~la~~G~~V~l~d~~~~~~ 341 (721)
|+||.|.|+ |.+|+.++..|++.|++|++.+++++..
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 41 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKI 41 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGC
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccc
Confidence 578999996 9999999999999999999999998753
No 419
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=94.44 E-value=0.078 Score=57.48 Aligned_cols=74 Identities=18% Similarity=0.191 Sum_probs=48.9
Q ss_pred CceeEEEEcCCC---CcHHHHHHHHHCC-CceE--EEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceecc
Q 004972 304 GVRKVAVIGGGL---MGSGIATAHILNN-IYVV--LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL 377 (721)
Q Consensus 304 ~~~kI~VIG~G~---mG~~iA~~la~~G-~~V~--l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~ 377 (721)
+..||+|||+|. ||...+..+...+ ++|+ ++|+++++++...++. | + ......+
T Consensus 36 ~~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~----------g-~---------~~~~~~~ 95 (417)
T 3v5n_A 36 KRIRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALSSTPEKAEASGREL----------G-L---------DPSRVYS 95 (417)
T ss_dssp CCEEEEEESCC--CHHHHHHHHHHHHTSCEEEEEEECCSSHHHHHHHHHHH----------T-C---------CGGGBCS
T ss_pred CcceEEEEcCCCchHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHc----------C-C---------CcccccC
Confidence 345899999999 9999888887765 5765 6799999876643211 1 0 0012345
Q ss_pred Ccc-ccC-------CCCEEEEcccCChH
Q 004972 378 DYS-EFK-------DVDMVIEAVIESVP 397 (721)
Q Consensus 378 ~~~-~l~-------~aDlVIeavpe~~~ 397 (721)
+++ .++ +.|+|++|+|....
T Consensus 96 ~~~~ll~~~~~~~~~vD~V~I~tp~~~H 123 (417)
T 3v5n_A 96 DFKEMAIREAKLKNGIEAVAIVTPNHVH 123 (417)
T ss_dssp CHHHHHHHHHHCTTCCSEEEECSCTTSH
T ss_pred CHHHHHhcccccCCCCcEEEECCCcHHH
Confidence 553 333 48999999996654
No 420
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=94.26 E-value=0.042 Score=57.96 Aligned_cols=69 Identities=13% Similarity=0.049 Sum_probs=45.1
Q ss_pred eeEEEEcCCCCcHHHHHH-H-HH-CCCceE-EEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCcc-
Q 004972 306 RKVAVIGGGLMGSGIATA-H-IL-NNIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS- 380 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~-l-a~-~G~~V~-l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~- 380 (721)
.||+|||+|.||..+... + .. .+++|+ ++|+++++.+.. + ....+...++++
T Consensus 3 ~rvgiiG~G~~g~~~~~~~~~~~~~~~~l~av~d~~~~~~~~~------------~-----------~~~~~~~~~~~~~ 59 (345)
T 3f4l_A 3 INCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQA------------P-----------IYSHIHFTSDLDE 59 (345)
T ss_dssp EEEEEECCSHHHHHHTHHHHTTCTTTEEEEEEECSSCCGGGGS------------G-----------GGTTCEEESCTHH
T ss_pred eEEEEEecCHHHHHHHHHHHHhcCCCeEEEEEEcCCHhHHHHH------------H-----------hcCCCceECCHHH
Confidence 589999999999874333 3 32 367776 899988764211 0 112345566774
Q ss_pred ccC--CCCEEEEcccCChH
Q 004972 381 EFK--DVDMVIEAVIESVP 397 (721)
Q Consensus 381 ~l~--~aDlVIeavpe~~~ 397 (721)
.++ ++|+|++|+|....
T Consensus 60 ll~~~~~D~V~i~tp~~~h 78 (345)
T 3f4l_A 60 VLNDPDVKLVVVCTHADSH 78 (345)
T ss_dssp HHTCTTEEEEEECSCGGGH
T ss_pred HhcCCCCCEEEEcCChHHH
Confidence 344 48999999995544
No 421
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=94.25 E-value=0.037 Score=56.08 Aligned_cols=73 Identities=16% Similarity=0.145 Sum_probs=53.1
Q ss_pred eeEEEEcCCC-CcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCccccCC
Q 004972 306 RKVAVIGGGL-MGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 384 (721)
Q Consensus 306 ~kI~VIG~G~-mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~ 384 (721)
+++.|||.|. +|.++|..|...|..|+++.+....++ +.+++
T Consensus 162 k~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T~~L~-------------------------------------~~~~~ 204 (286)
T 4a5o_A 162 MDAVVVGASNIVGRPMALELLLGGCTVTVTHRFTRDLA-------------------------------------DHVSR 204 (286)
T ss_dssp CEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTCSCHH-------------------------------------HHHHT
T ss_pred CEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCCcCHH-------------------------------------HHhcc
Confidence 5899999865 899999999999999999975322111 33678
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCC
Q 004972 385 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 422 (721)
Q Consensus 385 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~ 422 (721)
||+||-+++-..-++ ...+++++++++..+.
T Consensus 205 ADIVI~Avg~p~~I~-------~~~vk~GavVIDvgi~ 235 (286)
T 4a5o_A 205 ADLVVVAAGKPGLVK-------GEWIKEGAIVIDVGIN 235 (286)
T ss_dssp CSEEEECCCCTTCBC-------GGGSCTTCEEEECCSC
T ss_pred CCEEEECCCCCCCCC-------HHHcCCCeEEEEeccc
Confidence 999999997322222 2456888888875543
No 422
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=94.19 E-value=0.038 Score=56.60 Aligned_cols=33 Identities=27% Similarity=0.264 Sum_probs=30.6
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCC-ceEEEeCCH
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNS 338 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~-~V~l~d~~~ 338 (721)
.||.|||+|-.|+.++..|++.|. +++++|.+.
T Consensus 37 ~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 37 FAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK 70 (292)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 589999999999999999999997 899999875
No 423
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=94.16 E-value=0.074 Score=56.61 Aligned_cols=67 Identities=15% Similarity=0.075 Sum_probs=47.2
Q ss_pred eeEEEEcCCCCcHHHHHHHHHC--CCceE-EEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-cc
Q 004972 306 RKVAVIGGGLMGSGIATAHILN--NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SE 381 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~--G~~V~-l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~ 381 (721)
.||+|||+| +|.--+..+.+. +++++ ++|+++++.++..++ . .+...+|+ +.
T Consensus 8 ~rv~VvG~G-~g~~h~~a~~~~~~~~elvav~~~~~~~a~~~a~~----------------------~-gv~~~~~~~~l 63 (372)
T 4gmf_A 8 QRVLIVGAK-FGEMYLNAFMQPPEGLELVGLLAQGSARSRELAHA----------------------F-GIPLYTSPEQI 63 (372)
T ss_dssp EEEEEECST-TTHHHHHTTSSCCTTEEEEEEECCSSHHHHHHHHH----------------------T-TCCEESSGGGC
T ss_pred CEEEEEehH-HHHHHHHHHHhCCCCeEEEEEECCCHHHHHHHHHH----------------------h-CCCEECCHHHH
Confidence 589999999 798777777654 56766 789999887654221 1 23445677 45
Q ss_pred cCCCCEEEEcccCCh
Q 004972 382 FKDVDMVIEAVIESV 396 (721)
Q Consensus 382 l~~aDlVIeavpe~~ 396 (721)
+++.|+|+.|+|...
T Consensus 64 ~~~~D~v~i~~p~~~ 78 (372)
T 4gmf_A 64 TGMPDIACIVVRSTV 78 (372)
T ss_dssp CSCCSEEEECCC--C
T ss_pred hcCCCEEEEECCCcc
Confidence 688999999999654
No 424
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=94.10 E-value=0.033 Score=56.30 Aligned_cols=72 Identities=22% Similarity=0.224 Sum_probs=52.9
Q ss_pred eeEEEEcCCCC-cHHHHHHHHHC--CCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCcccc
Q 004972 306 RKVAVIGGGLM-GSGIATAHILN--NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF 382 (721)
Q Consensus 306 ~kI~VIG~G~m-G~~iA~~la~~--G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l 382 (721)
+++.|||.|.| |..+|..|... |..|++++++...+. +.+
T Consensus 159 k~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t~~L~-------------------------------------~~~ 201 (281)
T 2c2x_A 159 AHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGTRDLP-------------------------------------ALT 201 (281)
T ss_dssp CEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTCSCHH-------------------------------------HHH
T ss_pred CEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECchhHHH-------------------------------------HHH
Confidence 58999999976 99999999999 889999975542211 346
Q ss_pred CCCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCC
Q 004972 383 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 421 (721)
Q Consensus 383 ~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts 421 (721)
++||+||-|++-.--++. ..+++++++++...
T Consensus 202 ~~ADIVI~Avg~p~~I~~-------~~vk~GavVIDVgi 233 (281)
T 2c2x_A 202 RQADIVVAAVGVAHLLTA-------DMVRPGAAVIDVGV 233 (281)
T ss_dssp TTCSEEEECSCCTTCBCG-------GGSCTTCEEEECCE
T ss_pred hhCCEEEECCCCCcccCH-------HHcCCCcEEEEccC
Confidence 889999999973322222 33578888886554
No 425
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=94.04 E-value=0.11 Score=53.98 Aligned_cols=36 Identities=17% Similarity=0.231 Sum_probs=30.5
Q ss_pred ceeEEEEcC-CCCcHHHHHHHHHCCCce-EEEeCCHHH
Q 004972 305 VRKVAVIGG-GLMGSGIATAHILNNIYV-VLKEVNSEY 340 (721)
Q Consensus 305 ~~kI~VIG~-G~mG~~iA~~la~~G~~V-~l~d~~~~~ 340 (721)
|.||||||+ |.||...+..+...+.++ .++|+++++
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~ 40 (318)
T 3oa2_A 3 MKNFALIGAAGYIAPRHMRAIKDTGNCLVSAYDINDSV 40 (318)
T ss_dssp CCEEEEETTTSSSHHHHHHHHHHTTCEEEEEECSSCCC
T ss_pred ceEEEEECCCcHHHHHHHHHHHhCCCEEEEEEcCCHHH
Confidence 569999999 799999999999888765 588888764
No 426
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=94.03 E-value=0.25 Score=51.19 Aligned_cols=40 Identities=18% Similarity=0.104 Sum_probs=35.5
Q ss_pred ceeEEEEcC-CCCcHHHHHHHHHCCCceEEEeCCHHHHHHH
Q 004972 305 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKG 344 (721)
Q Consensus 305 ~~kI~VIG~-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~ 344 (721)
-++|.|.|+ |.+|+.++..|++.|++|++.+++++..+..
T Consensus 11 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~ 51 (342)
T 1y1p_A 11 GSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANL 51 (342)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHH
Confidence 468999998 9999999999999999999999998775543
No 427
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=93.90 E-value=0.028 Score=55.55 Aligned_cols=32 Identities=28% Similarity=0.329 Sum_probs=30.3
Q ss_pred eEEEEcCCCCcHHHHHHHHHCCCceEEEeCCH
Q 004972 307 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 338 (721)
Q Consensus 307 kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~ 338 (721)
.|+|||+|.-|.+.|..|+++|++|+++|+++
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~ 35 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAGHQVHLFDKSR 35 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 59999999999999999999999999999864
No 428
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=93.85 E-value=0.13 Score=53.40 Aligned_cols=36 Identities=11% Similarity=0.032 Sum_probs=30.6
Q ss_pred ceeEEEEcC-CCCcHHHHHHHHHCCCce-EEEeCCHHH
Q 004972 305 VRKVAVIGG-GLMGSGIATAHILNNIYV-VLKEVNSEY 340 (721)
Q Consensus 305 ~~kI~VIG~-G~mG~~iA~~la~~G~~V-~l~d~~~~~ 340 (721)
|.||+|||+ |.||...+..+...+.+| .++|+++++
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~ 40 (312)
T 3o9z_A 3 MTRFALTGLAGYIAPRHLKAIKEVGGVLVASLDPATNV 40 (312)
T ss_dssp CCEEEEECTTSSSHHHHHHHHHHTTCEEEEEECSSCCC
T ss_pred ceEEEEECCChHHHHHHHHHHHhCCCEEEEEEcCCHHH
Confidence 569999999 789999999999888765 588988775
No 429
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=93.77 E-value=0.06 Score=56.26 Aligned_cols=65 Identities=18% Similarity=0.184 Sum_probs=44.1
Q ss_pred ceeEEEEcCCCCcHHHHHHHHHCC---------Cce-EEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCce
Q 004972 305 VRKVAVIGGGLMGSGIATAHILNN---------IYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLK 374 (721)
Q Consensus 305 ~~kI~VIG~G~mG~~iA~~la~~G---------~~V-~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~ 374 (721)
..||+|||+|.||+.++..+.+.. .+| .++|++.++. ++ +. ...
T Consensus 3 ~irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~----------------~~-~~---------~~~ 56 (332)
T 2ejw_A 3 ALKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRDPRKP----------------RA-IP---------QEL 56 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSCTTSC----------------CS-SC---------GGG
T ss_pred eeEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECCHHHh----------------hc-cC---------ccc
Confidence 358999999999999999988763 444 4777775431 11 11 112
Q ss_pred eccCccccCCCCEEEEcccCC
Q 004972 375 GVLDYSEFKDVDMVIEAVIES 395 (721)
Q Consensus 375 ~~~~~~~l~~aDlVIeavpe~ 395 (721)
.++|++.+-+.|+|++|+|..
T Consensus 57 ~~~d~~~ll~iDvVve~t~~~ 77 (332)
T 2ejw_A 57 LRAEPFDLLEADLVVEAMGGV 77 (332)
T ss_dssp EESSCCCCTTCSEEEECCCCS
T ss_pred ccCCHHHHhCCCEEEECCCCc
Confidence 456664433999999999855
No 430
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=93.77 E-value=0.059 Score=54.98 Aligned_cols=100 Identities=14% Similarity=0.119 Sum_probs=57.1
Q ss_pred ceeEEEEc-CCCCcHHHHHHHHHC-CCceE-EEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-c
Q 004972 305 VRKVAVIG-GGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-S 380 (721)
Q Consensus 305 ~~kI~VIG-~G~mG~~iA~~la~~-G~~V~-l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~ 380 (721)
+.||+|+| +|.||..++..+... +++++ ++|+++..... .+ ...+...+ ...+..++|+ +
T Consensus 21 ~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G-~d-----~gel~G~~----------~~gv~v~~dl~~ 84 (288)
T 3ijp_A 21 SMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVD-KD-----ASILIGSD----------FLGVRITDDPES 84 (288)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTT-SB-----GGGGTTCS----------CCSCBCBSCHHH
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccc-cc-----hHHhhccC----------cCCceeeCCHHH
Confidence 35899999 899999999988754 67755 56876432000 00 00000000 0124556676 4
Q ss_pred ccCCCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCH
Q 004972 381 EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL 425 (721)
Q Consensus 381 ~l~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i 425 (721)
.+.++|+||++.+ ++...+.+.. .+..+.-+++.|++++.
T Consensus 85 ll~~aDVvIDFT~--p~a~~~~~~~---~l~~Gv~vViGTTG~~~ 124 (288)
T 3ijp_A 85 AFSNTEGILDFSQ--PQASVLYANY---AAQKSLIHIIGTTGFSK 124 (288)
T ss_dssp HTTSCSEEEECSC--HHHHHHHHHH---HHHHTCEEEECCCCCCH
T ss_pred HhcCCCEEEEcCC--HHHHHHHHHH---HHHcCCCEEEECCCCCH
Confidence 4689999999886 5443333333 33345555555655543
No 431
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=93.73 E-value=0.028 Score=60.16 Aligned_cols=34 Identities=32% Similarity=0.425 Sum_probs=31.4
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHH
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSE 339 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~ 339 (721)
+||.|||+|.-|..+|..|+++|++|+++|++++
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~ 35 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSA 35 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 4899999999999999999999999999998653
No 432
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=93.72 E-value=0.11 Score=53.06 Aligned_cols=41 Identities=20% Similarity=0.116 Sum_probs=36.5
Q ss_pred eeEEEEc-CCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHH
Q 004972 306 RKVAVIG-GGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIK 346 (721)
Q Consensus 306 ~kI~VIG-~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~ 346 (721)
++|.|+| +|-+|.+++..|++.|.+|++++|++++++...+
T Consensus 120 k~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~ 161 (287)
T 1lu9_A 120 KKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAAD 161 (287)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHH
Confidence 5799999 8999999999999999999999999887766543
No 433
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=93.70 E-value=0.063 Score=57.31 Aligned_cols=70 Identities=21% Similarity=0.224 Sum_probs=44.8
Q ss_pred eEEEEcCCCCcHHHHHHHHH--------CCCce-EEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceecc
Q 004972 307 KVAVIGGGLMGSGIATAHIL--------NNIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL 377 (721)
Q Consensus 307 kI~VIG~G~mG~~iA~~la~--------~G~~V-~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~ 377 (721)
||||||+|.||..-+..+.. .+.+| -++|+++++++...++ .+.-...+
T Consensus 27 rvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~----------------------~g~~~~y~ 84 (393)
T 4fb5_A 27 GIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGE----------------------FGFEKATA 84 (393)
T ss_dssp EEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHH----------------------HTCSEEES
T ss_pred cEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHH----------------------hCCCeecC
Confidence 79999999999876655432 24454 4889999887764321 12223456
Q ss_pred Cccc-c--CCCCEEEEcccCChHH
Q 004972 378 DYSE-F--KDVDMVIEAVIESVPL 398 (721)
Q Consensus 378 ~~~~-l--~~aDlVIeavpe~~~~ 398 (721)
|++. + .+.|+|++|+|.....
T Consensus 85 d~~ell~~~~iDaV~IatP~~~H~ 108 (393)
T 4fb5_A 85 DWRALIADPEVDVVSVTTPNQFHA 108 (393)
T ss_dssp CHHHHHHCTTCCEEEECSCGGGHH
T ss_pred CHHHHhcCCCCcEEEECCChHHHH
Confidence 6643 3 4689999999955543
No 434
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=93.67 E-value=0.26 Score=52.34 Aligned_cols=154 Identities=12% Similarity=0.116 Sum_probs=79.6
Q ss_pred CCceeEEEEcC-CCCcHHHHHHHHHCC-CceEEE-eCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc
Q 004972 303 RGVRKVAVIGG-GLMGSGIATAHILNN-IYVVLK-EVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 379 (721)
Q Consensus 303 ~~~~kI~VIG~-G~mG~~iA~~la~~G-~~V~l~-d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~ 379 (721)
|++.||+|||+ |+.|.-+...|.++- .++..+ ..+...=+. +..... ......+.....+ -.+...+..
T Consensus 17 M~~~kVaIvGAtG~vG~ell~lL~~hp~~el~~l~aS~~saGk~----~~~~~~-~~~~~~~p~~~~~---~~v~~~~~~ 88 (381)
T 3hsk_A 17 MSVKKAGVLGATGSVGQRFILLLSKHPEFEIHALGASSRSAGKK----YKDAAS-WKQTETLPETEQD---IVVQECKPE 88 (381)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSB----HHHHCC-CCCSSCCCHHHHT---CBCEESSSC
T ss_pred CCccEEEEECCCChHHHHHHHHHHcCCCceEEEeeccccccCCC----HHHhcc-ccccccccccccc---ceEEeCchh
Confidence 45578999995 999999999888764 356433 222111000 000000 0000001100000 012212222
Q ss_pred cccCCCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhcccCCCCcEEEecCCCCCCCC---------
Q 004972 380 SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVM--------- 450 (721)
Q Consensus 380 ~~l~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~~l~~~~~~~~r~ig~h~~~p~~~~--------- 450 (721)
+.+++||+||+|+| ....+++..++ ...++.++++++...... .-.....+.|+.++.
T Consensus 89 ~~~~~~Dvvf~alp--~~~s~~~~~~~---~~~G~~VIDlSa~fR~~~--------~vplvv~~vn~~~~~l~E~~r~~~ 155 (381)
T 3hsk_A 89 GNFLECDVVFSGLD--ADVAGDIEKSF---VEAGLAVVSNAKNYRREK--------DVPLVVPIVNPEHIDVVENKVKQA 155 (381)
T ss_dssp TTGGGCSEEEECCC--HHHHHHHHHHH---HHTTCEEEECCSTTTTCT--------TSCEECTTTCGGGGHHHHHHHHHH
T ss_pred hhcccCCEEEECCC--hhHHHHHHHHH---HhCCCEEEEcCCcccCCC--------CCcEEecccCHHHcCCHhhhhhhh
Confidence 25789999999999 55555665554 346788899998765421 111223344443331
Q ss_pred ------CeeEEecCCCCCHH-HHHHHHHHHHHcC
Q 004972 451 ------PLLEIVRTERTSAQ-VILDLMTVGKIIK 477 (721)
Q Consensus 451 ------~lvEiv~~~~t~~e-~~~~~~~l~~~lG 477 (721)
+--.+|.++++.+. .+-.+.+|.+..|
T Consensus 156 ~~~~~i~~~~iIaNPgC~tt~~~laL~PL~~~~g 189 (381)
T 3hsk_A 156 VSKGGKKPGFIICISNCSTAGLVAPLKPLVEKFG 189 (381)
T ss_dssp HHTTCCCCCEEEEECCHHHHHHHHHHHHHHHHHC
T ss_pred cccccccCCcEEECCCcHHHHHHHHHHHHHHhcC
Confidence 22236666665544 4555677887767
No 435
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=93.65 E-value=0.066 Score=52.08 Aligned_cols=35 Identities=14% Similarity=0.269 Sum_probs=32.2
Q ss_pred eEEEEc-CCCCcHHHHHHHHHCCCceEEEeCCHHHH
Q 004972 307 KVAVIG-GGLMGSGIATAHILNNIYVVLKEVNSEYL 341 (721)
Q Consensus 307 kI~VIG-~G~mG~~iA~~la~~G~~V~l~d~~~~~~ 341 (721)
||.|.| .|.+|..++..|++.|++|++++|+++..
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~ 37 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQV 37 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGS
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccch
Confidence 799999 59999999999999999999999998753
No 436
>1vrg_A Propionyl-COA carboxylase, beta subunit; TM0716, structural joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE; 2.30A {Thermotoga maritima} SCOP: c.14.1.4 c.14.1.4
Probab=93.61 E-value=0.73 Score=51.03 Aligned_cols=159 Identities=11% Similarity=0.056 Sum_probs=92.8
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccCCCcccccchHHHHHHHHHHhhCCCcEEEEE
Q 004972 26 NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAV 105 (721)
Q Consensus 26 Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~p~Iaav 105 (721)
-.++++-.....+.++.++.. .+-+|.|.=. ..|..|.+-++. -.......++ ..+.+...|+|+.|
T Consensus 344 G~~~~~~~~Kaar~i~~a~~~-~~Plv~lvDt-pG~~~G~~~E~~----------g~~~~~A~~~-~a~~~~~vP~isvI 410 (527)
T 1vrg_A 344 GVLDIDSSDKAARFIRFLDAF-NIPILTFVDT-PGYLPGVAQEHG----------GIIRHGAKLL-YAYSEATVPKITVI 410 (527)
T ss_dssp GCBCHHHHHHHHHHHHHHHHT-TCCEEEEEEE-CCBCCCHHHHHT----------THHHHHHHHH-HHHHHCCSCEEEEE
T ss_pred CCCCHHHHHHHHHHHHHHhhc-CCCeEEEecC-CCCcCchhhHHh----------HHHHHHHHHH-HHHhcCCCCEEEEE
Confidence 579999999999999888643 4445555322 124444332211 1122333455 56788999999999
Q ss_pred CCcccccchHhhh----hcCEEEeeCCceEeCc--ccccCccccccccc--cccCHHHHHH-HH--HcCCCcCHHHHHHc
Q 004972 106 EGLALGGGLELAM----GCHARIAAPKTQLGLP--ELTLGVIPGTQRLP--RLVGLSKAIE-MM--LLSKSITSEEGWKL 174 (721)
Q Consensus 106 ~G~a~GgG~~lal----acD~ria~~~a~~~~p--e~~~Gl~P~~~~l~--r~~G~~~a~~-l~--ltg~~~~a~eA~~~ 174 (721)
-|.|.|||..-.. .+|+++|.+++.++.- |....+ .++-. +.--....++ +. +.-+.-++..+.+.
T Consensus 411 ~g~~~gGg~~am~~~~~~~d~~~a~p~a~~~Vm~pegaa~I---l~r~~~~~~~d~~~~~~~~~~~y~~~~~~p~~~~~~ 487 (527)
T 1vrg_A 411 LRKAYGGAYIAMGSKHLGADMVLAWPSAEIAVMGPEGAANI---IFKREIEASSNPEETRRKLIEEYKQQFANPYIAASR 487 (527)
T ss_dssp EEEEEHHHHHHTTCGGGTCSEEEECTTCEEESSCHHHHHHH---HTHHHHHHSSCHHHHHHHHHHHHHHHTSSHHHHHHT
T ss_pred eCCcccHHHHHhcCCCCCCCEEEEcCCCeEEecCHHHHHHH---HhhhhhhcccCHHHHHHHHHHHHHHhhCCHHHHHHc
Confidence 9999988764332 3899888888777642 111111 11100 0000111111 22 11123567889999
Q ss_pred CCccEEcCCchHHHHHHHHHHHHHhc
Q 004972 175 GLIDAVVTSEELLKVSRLWALDIAAR 200 (721)
Q Consensus 175 Glv~~vv~~~~l~~~a~~~a~~~a~~ 200 (721)
|+||.|+++.+.........+.+..+
T Consensus 488 g~iD~II~p~~tR~~l~~~L~~l~~~ 513 (527)
T 1vrg_A 488 GYVDMVIDPRETRKYIMRALEVCETK 513 (527)
T ss_dssp TSSSEECCGGGHHHHHHHHHHHHTTC
T ss_pred CCCCeeeCHHHHHHHHHHHHHHHhcC
Confidence 99999999887766655555554433
No 437
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=93.59 E-value=0.11 Score=54.47 Aligned_cols=85 Identities=15% Similarity=0.212 Sum_probs=48.7
Q ss_pred eeEEEEcCCCCcHHHHHHHHHC-CCce-EEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHH--HHHHhhcCceeccCc-c
Q 004972 306 RKVAVIGGGLMGSGIATAHILN-NIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD--KANNALKMLKGVLDY-S 380 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~-G~~V-~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~i~~~~~~-~ 380 (721)
.||||+|+|.||..++..+.+. +.+| .+.|++++.+....+.. ...-.+.+... .... ..+....++ +
T Consensus 3 irVgIiG~G~iG~~~~r~l~~~~~~elvav~d~~~~~~~~~~~~~-----g~~~~~~~~~~v~~~~~--~~~~v~~d~~~ 75 (334)
T 2czc_A 3 VKVGVNGYGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKEL-----GIPVYAASEEFIPRFEK--EGFEVAGTLND 75 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHT-----TCCEEESSGGGHHHHHH--HTCCCSCBHHH
T ss_pred cEEEEEeEhHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHHHHHhc-----CccccccccccceeccC--CceEEcCcHHH
Confidence 5899999999999999998875 4465 46777766655432110 00000000000 0000 112334455 3
Q ss_pred ccCCCCEEEEcccCChH
Q 004972 381 EFKDVDMVIEAVIESVP 397 (721)
Q Consensus 381 ~l~~aDlVIeavpe~~~ 397 (721)
.+.++|+|++|.|....
T Consensus 76 l~~~vDvV~~aTp~~~h 92 (334)
T 2czc_A 76 LLEKVDIIVDATPGGIG 92 (334)
T ss_dssp HHTTCSEEEECCSTTHH
T ss_pred hccCCCEEEECCCcccc
Confidence 34689999999996553
No 438
>3gf3_A Glutaconyl-COA decarboxylase subunit A; sodium ION transport, biotin, glutamate fermentation, lyase; HET: COO; 1.75A {Clostridium symbiosum} PDB: 3gf7_A 3glm_A* 3gma_A*
Probab=93.58 E-value=1.1 Score=50.12 Aligned_cols=162 Identities=12% Similarity=-0.006 Sum_probs=90.1
Q ss_pred CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccCCCcccccchHHHHHHHHHHhhCCCcEEEE
Q 004972 25 VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAA 104 (721)
Q Consensus 25 ~Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~p~Iaa 104 (721)
.-++.+...+.+..+++.+.+.. +-+|.|.-.|+ +.+.+-..... . ...+.+.+.+. ..+.....|+|++
T Consensus 119 gGS~g~~~~~Ki~Ra~e~A~~~~-lPvI~l~dSgG-----Arl~~qe~~~~-~-l~~~g~if~~~--~~ls~~~iP~Isv 188 (588)
T 3gf3_A 119 AGAWVPGQAENLIRCSDAAKMMH-LPLIYLLNCSG-----VEFPNQDKVYP-N-RRGGGTPFFRN--SELNQLGIPVIVG 188 (588)
T ss_dssp GGCBCTTHHHHHHHHHHHHHHHT-CCEEEEECCCC-----BCGGGHHHHSS-S-TTSTTHHHHHH--HHHHHTTCCEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHHHcC-CCEEEEEcCCC-----cCccccccccc-c-hhhHHHHHHHH--HHHhcCCCCEEEE
Confidence 37788888888999888887543 45666654443 33321111000 0 11112222222 2255678999999
Q ss_pred ECCcccccchHhhhhcCEEEeeCCceEeCcccc--cCccccccccccc---cCHHHHHHHHHcCCCcCHHHHH--HcCCc
Q 004972 105 VEGLALGGGLELAMGCHARIAAPKTQLGLPELT--LGVIPGTQRLPRL---VGLSKAIEMMLLSKSITSEEGW--KLGLI 177 (721)
Q Consensus 105 v~G~a~GgG~~lalacD~ria~~~a~~~~pe~~--~Gl~P~~~~l~r~---~G~~~a~~l~ltg~~~~a~eA~--~~Glv 177 (721)
|.|.|.|||...++++|++++.+++.+++..-. -|+-|--...+.- +......+-..+.+.+...+.. ..|++
T Consensus 189 v~Gp~~gGgAy~a~~~~vim~~~~a~i~~aGP~vI~~~~p~g~~~~~~~~~~~~~~~ge~~vs~eeLGGa~~h~~~sGv~ 268 (588)
T 3gf3_A 189 IYGTNPAGGGYHSISPTILIAHQDANMAVGGAGILSGMNPKGYIDDEAAEQIIAAQIENSKLKVPAPGSVPIHYDETGFF 268 (588)
T ss_dssp ECSEEETHHHHHHHSSSEEEEETTCEEESSCCC---------------CHHHHHHHHHHHHTTCCCTTBHHHHTTTSCCS
T ss_pred EeCCCCchhhhHhhCCeEEEEECCcEEEecChhhhcccCccccccccchhhhhhhhccccccChhhccchhhhccccccc
Confidence 999999998877888898888899998875332 1211100001110 0011111111356667666666 58999
Q ss_pred cEEcCCchHHHHHHHHHHHHHh
Q 004972 178 DAVVTSEELLKVSRLWALDIAA 199 (721)
Q Consensus 178 ~~vv~~~~l~~~a~~~a~~~a~ 199 (721)
|.++++|+ ++.+.++++.+
T Consensus 269 d~~a~de~---~al~~~r~~ls 287 (588)
T 3gf3_A 269 REVYQNDL---GVIDGIKKYIS 287 (588)
T ss_dssp CEEESSHH---HHHHHHHHHHH
T ss_pred eEEeCCHH---HHHHHHHHHHH
Confidence 99997653 34445555444
No 439
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=93.55 E-value=0.034 Score=58.08 Aligned_cols=36 Identities=28% Similarity=0.459 Sum_probs=28.0
Q ss_pred ceeEEEEcCCCCcHHHHHHHHHC---------CCceE-EEeCCHHH
Q 004972 305 VRKVAVIGGGLMGSGIATAHILN---------NIYVV-LKEVNSEY 340 (721)
Q Consensus 305 ~~kI~VIG~G~mG~~iA~~la~~---------G~~V~-l~d~~~~~ 340 (721)
|.||+|||+|.||+.++..+.+. +++|+ ++|++++.
T Consensus 2 mirvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~ 47 (327)
T 3do5_A 2 MIKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSI 47 (327)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSSCEE
T ss_pred cEEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCChHh
Confidence 46899999999999999999875 45554 66776543
No 440
>2x24_A Acetyl-COA carboxylase; fatty acid biosynthesis, ligase, lipid synthesis; HET: X24; 2.40A {Bos taurus} PDB: 3ff6_A* 3tdc_A*
Probab=93.53 E-value=0.17 Score=58.25 Aligned_cols=82 Identities=16% Similarity=0.129 Sum_probs=57.7
Q ss_pred CCCcEEEEECCcccccchHhhhhcCEEEeeCCceEeCcccccCccccccccccccCHHHHHHHHHcCCCc--CH------
Q 004972 97 CKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGTQRLPRLVGLSKAIEMMLLSKSI--TS------ 168 (721)
Q Consensus 97 ~~~p~Iaav~G~a~GgG~~lalacD~ria~~~a~~~~pe~~~Gl~P~~~~l~r~~G~~~a~~l~ltg~~~--~a------ 168 (721)
...|+|++|.|.|.|||..++..||++|+.+++.+.+. |+.. .+. .+|+.+ +.
T Consensus 258 ~~iP~IsvV~G~~~GGgAy~~~lgD~vI~~~~a~i~lt-----------------Gp~v-i~~-~~Ge~vy~s~e~LGGa 318 (793)
T 2x24_A 258 DEIVTISMVSCRALGIGAYLVRLGQRVIQVENSHIILT-----------------GATA-LNK-VLGRDVYTSNNQLGGV 318 (793)
T ss_dssp HHSCEEEEECSEEETHHHHHHHHTCCEEEETTCEEESS-----------------CHHH-HHH-HHSSCCCSCHHHHHSH
T ss_pred CCCCEEEEEecCCchHHHHHHhhCCeEEEeccccEEec-----------------CHHH-HHH-hcCCcccCChhhhccH
Confidence 46999999999999999999999999999998777654 3222 222 345555 32
Q ss_pred HHHHHcCCccEEcCCchHHHHHHHHHHHHHhc
Q 004972 169 EEGWKLGLIDAVVTSEELLKVSRLWALDIAAR 200 (721)
Q Consensus 169 ~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~ 200 (721)
+-....|++|.+++++. ++...++++.+.
T Consensus 319 ~v~~~~Gv~d~vv~dd~---ea~~~ir~~Lsy 347 (793)
T 2x24_A 319 QIMHHNGVSHVTVPDDF---EGVCTILEWLSY 347 (793)
T ss_dssp HHHTTTTSCSEEESSHH---HHHHHHHHHHTT
T ss_pred HHHHhcCceEEEeCCHH---HHHHHHHHHHHh
Confidence 22557899999997642 344444444443
No 441
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=93.52 E-value=0.14 Score=54.17 Aligned_cols=33 Identities=21% Similarity=0.409 Sum_probs=30.2
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCC-ceEEEeCCH
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNS 338 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~-~V~l~d~~~ 338 (721)
.+|.|||+|-.|+.+|..|+.+|. +++++|.+.
T Consensus 119 ~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~ 152 (353)
T 3h5n_A 119 AKVVILGCGGIGNHVSVILATSGIGEIILIDNDQ 152 (353)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCB
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCc
Confidence 489999999999999999999997 899999863
No 442
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=93.47 E-value=0.15 Score=53.21 Aligned_cols=72 Identities=11% Similarity=0.070 Sum_probs=48.1
Q ss_pred CCCceeEEEEcCCCCcH-HHHHHHHHC-CCceE-EEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccC
Q 004972 302 PRGVRKVAVIGGGLMGS-GIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLD 378 (721)
Q Consensus 302 ~~~~~kI~VIG~G~mG~-~iA~~la~~-G~~V~-l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~ 378 (721)
.|+..||+|||+|.||. ..+..+... +.+|+ ++|++++. ..+...++
T Consensus 22 ~M~~~rvgiiG~G~ig~~~~~~~l~~~~~~~lvav~d~~~~~------------------------------~g~~~~~~ 71 (330)
T 4ew6_A 22 SMSPINLAIVGVGKIVRDQHLPSIAKNANFKLVATASRHGTV------------------------------EGVNSYTT 71 (330)
T ss_dssp CCCCEEEEEECCSHHHHHTHHHHHHHCTTEEEEEEECSSCCC------------------------------TTSEEESS
T ss_pred cCCCceEEEEecCHHHHHHHHHHHHhCCCeEEEEEEeCChhh------------------------------cCCCccCC
Confidence 34556899999999998 688888775 66654 78887542 02344556
Q ss_pred ccc-c---CCCCEEEEcccCChHHHHHHHHH
Q 004972 379 YSE-F---KDVDMVIEAVIESVPLKQKIFSE 405 (721)
Q Consensus 379 ~~~-l---~~aDlVIeavpe~~~~k~~v~~~ 405 (721)
++. + .+.|+|++|+| ...-.++..+
T Consensus 72 ~~~ll~~~~~vD~V~i~tp--~~~H~~~~~~ 100 (330)
T 4ew6_A 72 IEAMLDAEPSIDAVSLCMP--PQYRYEAAYK 100 (330)
T ss_dssp HHHHHHHCTTCCEEEECSC--HHHHHHHHHH
T ss_pred HHHHHhCCCCCCEEEEeCC--cHHHHHHHHH
Confidence 633 3 45899999999 4433344433
No 443
>3iav_A Propionyl-COA carboxylase complex B subunit; accase, pccase, ACC, PCC, CT, carboxyltransfe polyketide, fatty acid, PKS, FAS; 1.75A {Streptomyces coelicolor} PDB: 1xnw_A 3ib9_A* 3ibb_A 3mfm_C 1xny_A* 1xnv_A* 1xo6_A
Probab=93.42 E-value=1.7 Score=48.09 Aligned_cols=162 Identities=15% Similarity=0.209 Sum_probs=97.4
Q ss_pred EEeCCCCC--CCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccCCCcccccchHHHHHHHHHHh
Q 004972 18 ITLINPPV--NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIE 95 (721)
Q Consensus 18 i~l~~p~~--Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 95 (721)
|.=|+|.. -.++++-.....+.++.++.. .+-+|.|.=.++ |..|.+-++ ....+....++ .++.
T Consensus 336 vian~~~~~~G~l~~~~a~Kaarfi~~c~~~-~iPlv~lvDtpG-f~~G~~~E~----------~gi~~~~Ak~l-~a~a 402 (530)
T 3iav_A 336 IVANQPMQFAGCLDITASEKAARFVRTCDAF-NVPVLTFVDVPG-FLPGVDQEH----------DGIIRRGAKLI-FAYA 402 (530)
T ss_dssp EEEECTTSGGGCBCHHHHHHHHHHHHHHHHT-TCCEEEEEEECC-BCCCHHHHH----------TTHHHHHHHHH-HHHH
T ss_pred EEEecCcccCCCCCHHHHHHHHHHHHHHHhc-CCCEEEEeeCCC-CCccHHHHH----------hhHHHHHHHHH-HHHH
Confidence 33456643 679999999999988877754 355555533222 666654221 12233444556 6688
Q ss_pred hCCCcEEEEECCcccccchHhhhh-----cCEEEeeCCceEeCc--ccccCccccccccccccC------HHHHHHHH--
Q 004972 96 DCKKPIVAAVEGLALGGGLELAMG-----CHARIAAPKTQLGLP--ELTLGVIPGTQRLPRLVG------LSKAIEMM-- 160 (721)
Q Consensus 96 ~~~~p~Iaav~G~a~GgG~~lala-----cD~ria~~~a~~~~p--e~~~Gl~P~~~~l~r~~G------~~~a~~l~-- 160 (721)
+...|+|+.|-|.++|||. ++++ .|+++|.+++.++.- |....+ .+.+.+- ...-.++.
T Consensus 403 ~a~vP~itvI~g~~~GGa~-~am~~~~~~~d~~~awp~a~~~Vm~~egaa~i-----l~r~~~~~~~~d~~~~~~~~~~~ 476 (530)
T 3iav_A 403 EATVPLITVITRKAFGGAY-VVMGSKHLGADLNLAWPTAQIAVMGAQGAVNI-----LHRRTIADAGDDAEATRARLIQE 476 (530)
T ss_dssp HCCSCEEEEEEEEEEHHHH-HHTTCGGGTCSEEEECTTCEEESSCHHHHHHH-----HTSTTTSTTCTTCHHHHHHHHHH
T ss_pred hCCCCEEEEEeCCcchHHH-HHhcCCCCCCCEEEEcCCceEecCCHHHHHHH-----HhhhhhhhcccCHHHHHHHHHHH
Confidence 9999999999999998765 5554 699999888887752 221111 1111110 11111111
Q ss_pred HcCCCcCHHHHHHcCCccEEcCCchHHHHHHHHHHHHH
Q 004972 161 LLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIA 198 (721)
Q Consensus 161 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a 198 (721)
+.-+.-++..|.+.|+||.|+++.+.........+.+.
T Consensus 477 y~~~~~~p~~aa~~~~vD~VIdP~~TR~~l~~~l~~~~ 514 (530)
T 3iav_A 477 YEDALLNPYTAAERGYVDAVIMPSDTRRHIVRGLRQLR 514 (530)
T ss_dssp HHHHHSSSHHHHHTTSSSEECCGGGHHHHHHHHHHHHT
T ss_pred HHHhcCCHHHHHhcCCCCcccCHHHHHHHHHHHHHHHh
Confidence 11112366778899999999998887665544444433
No 444
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=93.26 E-value=0.11 Score=53.27 Aligned_cols=93 Identities=19% Similarity=-0.001 Sum_probs=59.2
Q ss_pred ceeEEEEcC-CCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCccc-c
Q 004972 305 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE-F 382 (721)
Q Consensus 305 ~~kI~VIG~-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-l 382 (721)
..||+|+|+ |.||..++..+.+.|++ .++.+++..... + ...+....++++ .
T Consensus 7 ~~rVaViG~sG~~G~~~~~~l~~~g~~-~V~~V~p~~~g~-------------~------------~~G~~vy~sl~el~ 60 (288)
T 2nu8_A 7 NTKVICQGFTGSQGTFHSEQAIAYGTK-MVGGVTPGKGGT-------------T------------HLGLPVFNTVREAV 60 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCE-EEEEECTTCTTC-------------E------------ETTEEEESSHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCe-EEEEeCCCcccc-------------e------------eCCeeccCCHHHHh
Confidence 358999998 99999999999888988 455665542100 0 012444555533 3
Q ss_pred C--CCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHH
Q 004972 383 K--DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 427 (721)
Q Consensus 383 ~--~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~~ 427 (721)
+ ++|++|+++| .....+++.+..+. .-..++ ..|.+++..+
T Consensus 61 ~~~~~D~viI~tP--~~~~~~~~~ea~~~-Gi~~iV-i~t~G~~~~~ 103 (288)
T 2nu8_A 61 AATGATASVIYVP--APFCKDSILEAIDA-GIKLII-TITEGIPTLD 103 (288)
T ss_dssp HHHCCCEEEECCC--GGGHHHHHHHHHHT-TCSEEE-ECCCCCCHHH
T ss_pred hcCCCCEEEEecC--HHHHHHHHHHHHHC-CCCEEE-EECCCCCHHH
Confidence 4 7999999999 56666766665543 223333 3455666543
No 445
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=93.23 E-value=0.021 Score=60.42 Aligned_cols=32 Identities=28% Similarity=0.215 Sum_probs=30.5
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCC-ceEEEeCC
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVN 337 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~-~V~l~d~~ 337 (721)
.||.|+|+|.+|.++|..+...|. +|+++|++
T Consensus 193 ~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 193 VKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 589999999999999999999998 89999998
No 446
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=93.22 E-value=0.12 Score=54.15 Aligned_cols=30 Identities=20% Similarity=0.307 Sum_probs=24.8
Q ss_pred eeEEEEcCCCCcHHHHHHHHHC-CCceEEEe
Q 004972 306 RKVAVIGGGLMGSGIATAHILN-NIYVVLKE 335 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~-G~~V~l~d 335 (721)
.||||+|+|.+|..+++.+.+. +.+|+.+.
T Consensus 4 ikVgI~G~GrIGr~l~R~l~~~p~vevvaI~ 34 (337)
T 3e5r_O 4 IKIGINGFGRIGRLVARVALQSEDVELVAVN 34 (337)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSSEEEEEEE
T ss_pred eEEEEECcCHHHHHHHHHHhCCCCeEEEEEE
Confidence 5899999999999999998876 56666444
No 447
>2bzr_A Propionyl-COA carboxylase beta chain 5; fatty acid biosynthesis, accase, ligase, transferase; 2.2A {Mycobacterium tuberculosis} PDB: 2a7s_A
Probab=93.22 E-value=1.1 Score=49.71 Aligned_cols=158 Identities=15% Similarity=0.151 Sum_probs=92.4
Q ss_pred CCCCC--CCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccCCCcccccchHHHHHHHHHHhhCC
Q 004972 21 INPPV--NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCK 98 (721)
Q Consensus 21 ~~p~~--Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 98 (721)
|+|.. -.++++-.....+.++.++.. .+-+|.|-=. ..|..|.+-++- -..+....++ ..+.+..
T Consensus 354 n~~~~~~G~l~~~~a~Kaar~i~~a~~~-~iPlv~lvDt-~Gf~~G~~~E~~----------Gi~~~ga~~l-~a~~~~~ 420 (548)
T 2bzr_A 354 NQPTHFAGCLDINASEKAARFVRTCDCF-NIPIVMLVDV-PGFLPGTDQEYN----------GIIRRGAKLL-YAYGEAT 420 (548)
T ss_dssp ECTTSGGGCBCHHHHHHHHHHHHHHHHT-TCCEEEEEEE-CCBCCCHHHHHT----------THHHHHHHHH-HHHHHCC
T ss_pred ECCcccCCCCCHHHHHHHHHHHHHHHhc-CCCEEEEeec-cCCCCChHHHHh----------hHHHHHHHHH-HHHhCCC
Confidence 45532 679999999999988888654 3444555322 235555442221 1122334555 5678899
Q ss_pred CcEEEEECCcccccchHhh----hhcCEEEeeCCceEeCc--ccccCccccccccccccC--------HHHHHH-HHH--
Q 004972 99 KPIVAAVEGLALGGGLELA----MGCHARIAAPKTQLGLP--ELTLGVIPGTQRLPRLVG--------LSKAIE-MML-- 161 (721)
Q Consensus 99 ~p~Iaav~G~a~GgG~~la----lacD~ria~~~a~~~~p--e~~~Gl~P~~~~l~r~~G--------~~~a~~-l~l-- 161 (721)
.|+|+.|-|.|+|||..-. +.+|+++|.++++++.- |....+ .+...+- ....++ +.-
T Consensus 421 VP~isvI~g~~~Ggg~~am~~~~~~~d~~~awp~a~i~Vmgpegaa~I-----l~r~~~~~~~~~g~~~~~~~~~~~~~y 495 (548)
T 2bzr_A 421 VPKITVITRKAYGGAYCVMGSKDMGCDVNLAWPTAQIAVMGASGAVGF-----VYRQQLAEAAANGEDIDKLRLRLQQEY 495 (548)
T ss_dssp SCEEEEEEEEEEHHHHHHTTCGGGTCSEEEECTTCEEESSCHHHHHHH-----HTCCC----------CHHHHHHHHHHH
T ss_pred CCEEEEEeCCcchHHHHHhccccCCCCEEEEcCCCEEEecCHHHHHHH-----HhhhHHhhhhcccccHHHHHHHHHHHH
Confidence 9999999999998876443 34899999888887642 211111 1111110 001111 211
Q ss_pred cCCCcCHHHHHHcCCccEEcCCchHHHHHHHHHHH
Q 004972 162 LSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALD 196 (721)
Q Consensus 162 tg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~ 196 (721)
.-..-++..+.+.|+||.|+++.+.........+.
T Consensus 496 ~~~~~~p~~~a~~g~iD~II~p~~tR~~l~~~L~~ 530 (548)
T 2bzr_A 496 EDTLVNPYVAAERGYVGAVIPPSHTRGYIGTALRL 530 (548)
T ss_dssp HHHHSBSHHHHHTTSSSEECCGGGHHHHHHHHHHH
T ss_pred HHhhCCHHHHHhcCCCceeeCHHHHHHHHHHHHHH
Confidence 11123456789999999999988766554444433
No 448
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=93.20 E-value=0.061 Score=57.36 Aligned_cols=70 Identities=19% Similarity=0.154 Sum_probs=47.9
Q ss_pred eEEEEcCCCCcHHHHHHHHHCC--------Cce-EEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceecc
Q 004972 307 KVAVIGGGLMGSGIATAHILNN--------IYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL 377 (721)
Q Consensus 307 kI~VIG~G~mG~~iA~~la~~G--------~~V-~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~ 377 (721)
||||||+|.||..-+..+.... .+| .++|+++++++...++ .+.-...+
T Consensus 8 rvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~~~~a~~~a~~----------------------~g~~~~~~ 65 (390)
T 4h3v_A 8 GIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRDAEAVRAAAGK----------------------LGWSTTET 65 (390)
T ss_dssp EEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSSHHHHHHHHHH----------------------HTCSEEES
T ss_pred cEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcCCHHHHHHHHHH----------------------cCCCcccC
Confidence 7999999999998877766532 244 5889999987765321 12224456
Q ss_pred Cccc-c--CCCCEEEEcccCChHH
Q 004972 378 DYSE-F--KDVDMVIEAVIESVPL 398 (721)
Q Consensus 378 ~~~~-l--~~aDlVIeavpe~~~~ 398 (721)
|++. + .+.|+|++|+|.....
T Consensus 66 d~~~ll~~~~iDaV~I~tP~~~H~ 89 (390)
T 4h3v_A 66 DWRTLLERDDVQLVDVCTPGDSHA 89 (390)
T ss_dssp CHHHHTTCTTCSEEEECSCGGGHH
T ss_pred CHHHHhcCCCCCEEEEeCChHHHH
Confidence 6633 4 4689999999955543
No 449
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=93.14 E-value=0.11 Score=53.31 Aligned_cols=34 Identities=21% Similarity=0.200 Sum_probs=31.7
Q ss_pred ceeEEEEcC-CCCcHHHHHHHHHCCCceEEEeCCH
Q 004972 305 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNS 338 (721)
Q Consensus 305 ~~kI~VIG~-G~mG~~iA~~la~~G~~V~l~d~~~ 338 (721)
+++|.|.|+ |.+|+.++..|++.|++|++.+|++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 36 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKT 36 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCS
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCC
Confidence 468999997 9999999999999999999999986
No 450
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=93.10 E-value=0.28 Score=48.84 Aligned_cols=31 Identities=19% Similarity=0.385 Sum_probs=26.1
Q ss_pred eEEEEcC-CCCcHHHHHHHHHC-CCceE-EEeCC
Q 004972 307 KVAVIGG-GLMGSGIATAHILN-NIYVV-LKEVN 337 (721)
Q Consensus 307 kI~VIG~-G~mG~~iA~~la~~-G~~V~-l~d~~ 337 (721)
||+|+|+ |.||..++..+... |++|+ ++|++
T Consensus 2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~ 35 (245)
T 1p9l_A 2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAG 35 (245)
T ss_dssp EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTT
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccC
Confidence 8999997 99999999998865 89876 56653
No 451
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=93.09 E-value=0.15 Score=55.33 Aligned_cols=64 Identities=20% Similarity=0.147 Sum_probs=43.5
Q ss_pred eeEEEEcCCCCcHHHHHHHHH----------CCCce-EEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCce
Q 004972 306 RKVAVIGGGLMGSGIATAHIL----------NNIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLK 374 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~----------~G~~V-~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~ 374 (721)
-||+|||+|.||+.++..+.+ .+++| .++|+++++.+.. . ....
T Consensus 11 irIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~~~~~~~~~-----------~--------------~~~~ 65 (444)
T 3mtj_A 11 IHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVRNLDKAEAL-----------A--------------GGLP 65 (444)
T ss_dssp EEEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECSCHHHHHHH-----------H--------------TTCC
T ss_pred ccEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEECCHHHhhhh-----------c--------------ccCc
Confidence 489999999999999987754 23444 4788888764321 0 1123
Q ss_pred eccCccc-c--CCCCEEEEcccC
Q 004972 375 GVLDYSE-F--KDVDMVIEAVIE 394 (721)
Q Consensus 375 ~~~~~~~-l--~~aDlVIeavpe 394 (721)
.++|++. + .+.|+|++|+|.
T Consensus 66 ~~~d~~ell~d~diDvVve~tp~ 88 (444)
T 3mtj_A 66 LTTNPFDVVDDPEIDIVVELIGG 88 (444)
T ss_dssp EESCTHHHHTCTTCCEEEECCCS
T ss_pred ccCCHHHHhcCCCCCEEEEcCCC
Confidence 4566633 3 468999999985
No 452
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=93.07 E-value=0.14 Score=52.99 Aligned_cols=34 Identities=18% Similarity=0.269 Sum_probs=31.7
Q ss_pred ceeEEEEcC-CCCcHHHHHHHHHCCCceEEEeCCH
Q 004972 305 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNS 338 (721)
Q Consensus 305 ~~kI~VIG~-G~mG~~iA~~la~~G~~V~l~d~~~ 338 (721)
+++|.|.|+ |.+|+.++..|++.|++|++.+|++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 38 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPL 38 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCC
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCc
Confidence 568999996 9999999999999999999999986
No 453
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=93.01 E-value=0.066 Score=57.23 Aligned_cols=73 Identities=16% Similarity=0.139 Sum_probs=48.1
Q ss_pred CCceeEEEEc-CCCCcHH-HH----HHHHHCC-Cce----------EEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHH
Q 004972 303 RGVRKVAVIG-GGLMGSG-IA----TAHILNN-IYV----------VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDK 365 (721)
Q Consensus 303 ~~~~kI~VIG-~G~mG~~-iA----~~la~~G-~~V----------~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 365 (721)
++..||+||| +|.||.. .+ ..+.+.+ ..+ .++|+++++++...+.
T Consensus 4 ~~~irigiiG~~G~~g~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~av~~~~~~~a~~~a~~------------------ 65 (383)
T 3oqb_A 4 TQRLGLIMNGVTGRMGLNQHLIRSIVAIRDQGGVRLKNGDRIMPDPILVGRSAEKVEALAKR------------------ 65 (383)
T ss_dssp CEEEEEEEESTTSTHHHHTTTTTTHHHHHHHTSEECTTSCEEEEEEEEECSSSHHHHHHHHH------------------
T ss_pred CceeEEEEEeccchhhhhhhHHHHHHHHhhcCceeecCCcccceeeEEEcCCHHHHHHHHHH------------------
Confidence 3345899999 9999998 66 6665543 332 4999999987664321
Q ss_pred HHHhhcCceeccCccc-c--CCCCEEEEcccCChH
Q 004972 366 ANNALKMLKGVLDYSE-F--KDVDMVIEAVIESVP 397 (721)
Q Consensus 366 ~~~~~~~i~~~~~~~~-l--~~aDlVIeavpe~~~ 397 (721)
.+.....+|++. + .+.|+|++|+|....
T Consensus 66 ----~~~~~~~~~~~~ll~~~~iD~V~i~tp~~~h 96 (383)
T 3oqb_A 66 ----FNIARWTTDLDAALADKNDTMFFDAATTQAR 96 (383)
T ss_dssp ----TTCCCEESCHHHHHHCSSCCEEEECSCSSSS
T ss_pred ----hCCCcccCCHHHHhcCCCCCEEEECCCchHH
Confidence 111134566633 3 458999999996554
No 454
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=93.00 E-value=0.1 Score=55.00 Aligned_cols=98 Identities=14% Similarity=0.113 Sum_probs=55.4
Q ss_pred ceeEEEEc-CCCCcHHHHHHHHHCCC-ceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCcccc
Q 004972 305 VRKVAVIG-GGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF 382 (721)
Q Consensus 305 ~~kI~VIG-~G~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l 382 (721)
+.||+|+| .|.+|..+.+.|.+... +++.+....+.-.+ +.... +.+. . ...+... +.+.+
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~--------~~~~~--~~~~-----g-~~~~~~~-~~~~~ 66 (345)
T 2ozp_A 4 KKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEP--------VHFVH--PNLR-----G-RTNLKFV-PPEKL 66 (345)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSB--------GGGTC--GGGT-----T-TCCCBCB-CGGGC
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCch--------hHHhC--chhc-----C-ccccccc-chhHh
Confidence 46899999 59999999999987654 77666543221100 00000 0000 0 0012111 12235
Q ss_pred CCCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCC
Q 004972 383 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 424 (721)
Q Consensus 383 ~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~ 424 (721)
.++|+||+|+|... ..++...+ +..++.++++++...
T Consensus 67 ~~vDvV~~a~g~~~--s~~~a~~~---~~aG~~VId~Sa~~r 103 (345)
T 2ozp_A 67 EPADILVLALPHGV--FAREFDRY---SALAPVLVDLSADFR 103 (345)
T ss_dssp CCCSEEEECCCTTH--HHHTHHHH---HTTCSEEEECSSTTS
T ss_pred cCCCEEEEcCCcHH--HHHHHHHH---HHCCCEEEEcCcccc
Confidence 78999999999443 33443333 456777888877654
No 455
>1on3_A Methylmalonyl-COA carboxyltransferase 12S subunit; domain duplication, multienzyme complex, transcarboxylase; HET: MCA; 1.90A {Propionibacterium freudenreichii} SCOP: c.14.1.4 c.14.1.4 PDB: 1on9_A*
Probab=92.94 E-value=0.91 Score=50.20 Aligned_cols=163 Identities=15% Similarity=0.073 Sum_probs=94.9
Q ss_pred CCCCC--CCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccCCCcccccchHHHHHHHHHHhhCC
Q 004972 21 INPPV--NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCK 98 (721)
Q Consensus 21 ~~p~~--Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 98 (721)
|+|.. -.++++-.....+.++.++.. .+-+|.|.=. ..|..|.+-++ .-..+....++ ..+.+..
T Consensus 333 n~~~~~~G~~~~~~a~Kaar~i~~~~~~-~iPlv~lvDt-pGf~~G~~~E~----------~Gi~~~~A~~l-~a~a~~~ 399 (523)
T 1on3_A 333 NQPSVMSGCLDINASDKAAEFVNFCDSF-NIPLVQLVDV-PGFLPGVQQEY----------GGIIRHGAKML-YAYSEAT 399 (523)
T ss_dssp ECTTSGGGCBCHHHHHHHHHHHHHHHHT-TCCEEEEEEE-CCBCCCHHHHH----------TTHHHHHHHHH-HHHHHCC
T ss_pred ecCCccCCCCCHHHHHHHHHHHHHHHhc-CCCeEEEEeC-CCcCcchHHHH----------hhHHHHHHHHH-HHHhcCC
Confidence 45532 579999999999999888643 4445555322 23555543221 11223344555 5688899
Q ss_pred CcEEEEECCcccccchHhhhh----cCEEEeeCCceEeCc--ccccCccccccccc--cccCHHHHHH-HH--HcCCCcC
Q 004972 99 KPIVAAVEGLALGGGLELAMG----CHARIAAPKTQLGLP--ELTLGVIPGTQRLP--RLVGLSKAIE-MM--LLSKSIT 167 (721)
Q Consensus 99 ~p~Iaav~G~a~GgG~~lala----cD~ria~~~a~~~~p--e~~~Gl~P~~~~l~--r~~G~~~a~~-l~--ltg~~~~ 167 (721)
.|+|+.|-|.++|||..-... +|+++|.+++.++.- |....+ .++-. +.--....++ +. +.-+.-+
T Consensus 400 vP~itvI~g~~~Ggg~~am~~~~~~~d~~~a~p~a~~~Vm~pegaa~I---l~r~~~~~~~d~~~~~~~~~~~y~~~~~~ 476 (523)
T 1on3_A 400 VPKITVVLRKAYGGSYLAMCNRDLGADAVYAWPSAEIAVMGAEGAANV---IFRKEIKAADDPDAMRAEKIEEYQNAFNT 476 (523)
T ss_dssp SCEEEEEEEEEEHHHHHTTTCGGGTCSEEEECTTCEEESSCHHHHHHH---HTHHHHHHSSCHHHHHHHHHHHHHHHHSS
T ss_pred CCEEEEEeCCcccHHHHHhcccCCCCCEEEEcCCCeEEecCHHHHHHH---HhhhhhhcccCHHHHHHHHHHHHHHhhCC
Confidence 999999999999888744433 788888877777642 111111 11100 0000111111 21 1111246
Q ss_pred HHHHHHcCCccEEcCCchHHHHHHHHHHHHHh
Q 004972 168 SEEGWKLGLIDAVVTSEELLKVSRLWALDIAA 199 (721)
Q Consensus 168 a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~ 199 (721)
+..+.+.|+||.|+++.+.........+.+..
T Consensus 477 p~~~a~~g~iD~II~p~~tR~~l~~~L~~l~~ 508 (523)
T 1on3_A 477 PYVAAARGQVDDVIDPADTRRKIASALEMYAT 508 (523)
T ss_dssp HHHHHHTTSSSEECCGGGHHHHHHHHHHHGGG
T ss_pred HHHHHhcCCCCEeeCHHHHHHHHHHHHHHHhc
Confidence 67899999999999988776655555554443
No 456
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=92.94 E-value=0.18 Score=52.73 Aligned_cols=36 Identities=19% Similarity=0.224 Sum_probs=31.4
Q ss_pred CCceeEEEEcC-CCCcHHHHHHHHHCCCceEEEeCCH
Q 004972 303 RGVRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNS 338 (721)
Q Consensus 303 ~~~~kI~VIG~-G~mG~~iA~~la~~G~~V~l~d~~~ 338 (721)
|..++|.|.|+ |.+|+.++..|++.|++|++++|++
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 44 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPG 44 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCC
Confidence 34568999998 9999999999999999999999976
No 457
>3n6r_B Propionyl-COA carboxylase, beta subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Roseobacter denitrificans}
Probab=92.93 E-value=1.1 Score=49.49 Aligned_cols=159 Identities=12% Similarity=0.057 Sum_probs=93.3
Q ss_pred EEeCCCCC--CCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccCCCcccccchHHHHHHHHHHh
Q 004972 18 ITLINPPV--NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIE 95 (721)
Q Consensus 18 i~l~~p~~--Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 95 (721)
|.=|+|.. -.++++-.....+.++.++.. .+-+|.|.=.+ .|..|.+-++ .-..+....++ .++.
T Consensus 342 vian~~~~~~G~l~~~~a~Kaarfi~lcd~~-~iPlv~lvDtp-Gf~~G~~~E~----------~Gi~~~gAk~l-~a~a 408 (531)
T 3n6r_B 342 VVANQPLVLAGCLDIDSSRKAARFVRFCDAF-EIPLLTLIDVP-GFLPGTSQEY----------GGVIKHGAKLL-YAYG 408 (531)
T ss_dssp EEEECTTTGGGCBCHHHHHHHHHHHHHHHHT-TCCEEEEEEEC-SBCCSHHHHH----------TTHHHHHHHHH-HHHH
T ss_pred EEEecccccCCCCCHHHHHHHHHHHHHhhcc-CCCEEEEeCCC-CCCCCHHHHH----------hhHHHHHHHHH-HHHH
Confidence 33356643 579999999988888877654 35555553222 2444443221 11233444556 6788
Q ss_pred hCCCcEEEEECCcccccchHhhh----hcCEEEeeCCceEeCc--ccccCcccccccccccc---CHHHHHHHHHcCCCc
Q 004972 96 DCKKPIVAAVEGLALGGGLELAM----GCHARIAAPKTQLGLP--ELTLGVIPGTQRLPRLV---GLSKAIEMMLLSKSI 166 (721)
Q Consensus 96 ~~~~p~Iaav~G~a~GgG~~lal----acD~ria~~~a~~~~p--e~~~Gl~P~~~~l~r~~---G~~~a~~l~ltg~~~ 166 (721)
+..+|+|+.|-|.++|||..-.. .+|+++|.+++.++.- |....+ .+.+.+ -....+.--+.-+.-
T Consensus 409 ~a~VP~itvI~g~~~Ggg~~am~~~~~~~d~~~awp~A~i~Vm~pegaa~I-----l~r~~~~~~~~~~~~~~~y~~~~~ 483 (531)
T 3n6r_B 409 EATVPMVTVITRKAYGGAYVVMSSKHLRADFNYAWPTAEVAVMGAKGATEI-----IHRGDLGDPEKIAQHTADYEERFA 483 (531)
T ss_dssp HCCSCEEEEEEEEEEHHHHHHTTCGGGTCSEEEECTTCEEESSCHHHHHHH-----HCCTTTTSTTHHHHHHHHHHHHHS
T ss_pred hCCCCEEEEEcCCccchhhhhccCccCCCCeEEEcCCceEecCCHHHHHHH-----HhcccccchhHHHHHHHHHHHHhc
Confidence 99999999999999988863333 3899998888877652 221111 111111 011111111111223
Q ss_pred CHHHHHHcCCccEEcCCchHHHHHHHHH
Q 004972 167 TSEEGWKLGLIDAVVTSEELLKVSRLWA 194 (721)
Q Consensus 167 ~a~eA~~~Glv~~vv~~~~l~~~a~~~a 194 (721)
++..|.+.|+||.|+++.+.........
T Consensus 484 ~p~~aa~~~~vD~vIdP~~TR~~l~~~l 511 (531)
T 3n6r_B 484 NPFVASERGFVDEVIQPRSTRKRVARAF 511 (531)
T ss_dssp SSHHHHHHTSSSEECCGGGHHHHHHHHH
T ss_pred CHHHHHhcCccCcccCHHHHHHHHHHHH
Confidence 5556788999999999888766444433
No 458
>1pix_A Glutaconyl-COA decarboxylase A subunit; biotin-dependent ION pump, carboxyltransferase, lyase; 2.20A {Acidaminococcus fermentans} SCOP: c.14.1.4 c.14.1.4
Probab=92.88 E-value=0.49 Score=52.99 Aligned_cols=158 Identities=11% Similarity=0.102 Sum_probs=96.2
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCCCCchhhhhccCCCcccccchHHHHHHHHHHhhCCCcEEEEE
Q 004972 26 NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAV 105 (721)
Q Consensus 26 Nal~~~~~~~l~~~l~~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~p~Iaav 105 (721)
-.++++-.....+.++.++. ..+-+|.|.=. ..|..|.+-++ .-..+....++ .++.+...|+|+.|
T Consensus 385 G~l~~~~a~Kaarfi~~c~~-~~iPlv~lvDt-pGf~~G~~~E~----------~Gi~~~gA~~~-~a~a~a~vP~itvI 451 (587)
T 1pix_A 385 GKLYRQGLVKMNEFVTLCAR-DRLPIVWIQDT-TGIDVGNDAEK----------AELLGLGQSLI-YSIQTSHIPQFEIT 451 (587)
T ss_dssp TEECHHHHHHHHHHHHHHHH-TTCCEEEEECC-CEECCSHHHHH----------TTHHHHHHHHH-HHHHTCCCCEEEEE
T ss_pred CCcCHHHHHHHHHHHHHhhc-CCCCeEEEecC-CCCCCcHHHHH----------HHHHHHHHHHH-HHHHhCCCCEEEEE
Confidence 46889999999999987764 34555666432 23555543221 11233444566 67899999999999
Q ss_pred CCcccccchHhhhh-----c--CEEEeeCCceEeCc--ccccCccccccccccc----cC---HHHH---HHHH--HcCC
Q 004972 106 EGLALGGGLELAMG-----C--HARIAAPKTQLGLP--ELTLGVIPGTQRLPRL----VG---LSKA---IEMM--LLSK 164 (721)
Q Consensus 106 ~G~a~GgG~~lala-----c--D~ria~~~a~~~~p--e~~~Gl~P~~~~l~r~----~G---~~~a---~~l~--ltg~ 164 (721)
-|-++|||. ++++ + |+++|.+++.++.- |....+ .++-... .| ...+ .++. +. +
T Consensus 452 ~g~~~Ggg~-~am~~~~~~~~~d~~~a~p~A~~~Vm~pegaa~I---l~r~~~~~~~~~g~~~~~~~~~~~~~~~~y~-~ 526 (587)
T 1pix_A 452 LRKGTAAAH-YVLGGPQGNDTNAFSIGTAATEIAVMNGETAATA---MYSRRLAKDRKAGKDLQPTIDKMNNLIQAFY-T 526 (587)
T ss_dssp CSEEETTHH-HHTTCTTCTTTEEEEEECTTCEEESSCHHHHHHH---HHHHHHHHHHHTTCCCHHHHHHHHHHHHHHH-H
T ss_pred cCCCccHHH-HHhcCcccCcccceeeeccCCeEecCCHHHHHHH---HHhhhhhhhhhcCCChHHHHHHHHHHHHHHH-H
Confidence 999998874 5554 4 99888888887742 111111 1111000 00 0000 0111 11 1
Q ss_pred CcCHHHHHHcCCccEEcCCchHHHHHHHHHHHHHhcC
Q 004972 165 SITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARR 201 (721)
Q Consensus 165 ~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~a~~~ 201 (721)
..++..|.+.|+||.|+++.+.........+.+.+.+
T Consensus 527 ~~~p~~aa~~g~iD~VI~p~~tR~~l~~~L~~~~~~~ 563 (587)
T 1pix_A 527 KSRPKVCAELGLVDEIVDMNKIRGYVEAFTEAAYQNP 563 (587)
T ss_dssp TTSHHHHHHHTSSSEECCTTTHHHHHHHHHHHHTTSC
T ss_pred hCCHHHHHhcCCCccccCHHHHHHHHHHHHHHHhcCC
Confidence 4788899999999999998887766666655555444
No 459
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=92.85 E-value=0.092 Score=58.60 Aligned_cols=36 Identities=19% Similarity=0.209 Sum_probs=32.8
Q ss_pred ceeEEEEcC-CCCcHHHHHHHHHCCCceEEEeCCHHH
Q 004972 305 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEY 340 (721)
Q Consensus 305 ~~kI~VIG~-G~mG~~iA~~la~~G~~V~l~d~~~~~ 340 (721)
++||.|.|+ |.+|+.++..|++.|++|+++++++..
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~ 183 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPK 183 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCC
Confidence 468999995 999999999999999999999998764
No 460
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=92.67 E-value=0.14 Score=53.71 Aligned_cols=102 Identities=17% Similarity=0.160 Sum_probs=55.1
Q ss_pred eeEEEEcCCCCcHHHHHHHHHC-CCceE-EEeCCHHHHHHHHHHHHHHHHhhhhcCC-C-CHHHHHHhhc--CceeccCc
Q 004972 306 RKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGK-L-TQDKANNALK--MLKGVLDY 379 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~-G~~V~-l~d~~~~~~~~~~~~~~~~~~~~~~~g~-~-~~~~~~~~~~--~i~~~~~~ 379 (721)
.||||+|+|.||..+++.+.+. +.+|+ +.|++++....... ..+. . .....+..+. .+....+.
T Consensus 2 ikVgIiGaG~iG~~~~r~L~~~p~~elvav~d~~~~~~~~~a~----------~~g~~~~~~~~~~~~~~~~~v~v~~~~ 71 (340)
T 1b7g_O 2 VNVAVNGYGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAH----------RRGIRIYVPQQSIKKFEESGIPVAGTV 71 (340)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHH----------HTTCCEECCGGGHHHHHTTTCCCCCCH
T ss_pred eEEEEEecCHHHHHHHHHHHcCCCCEEEEEEcCChHHHHHHHH----------hcCcceecCcCHHHHhcccccccccCH
Confidence 4899999999999999998875 44654 66776555433211 1110 0 0000011011 12223333
Q ss_pred cc-cCCCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCC
Q 004972 380 SE-FKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 422 (721)
Q Consensus 380 ~~-l~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~ 422 (721)
+. +.++|+||+|.|.... .+.... ++..++.++++++.
T Consensus 72 e~l~~~vDvV~~aTp~~~s--~~~a~~---~~~aG~kvV~~sa~ 110 (340)
T 1b7g_O 72 EDLIKTSDIVVDTTPNGVG--AQYKPI---YLQLQRNAIFQGGE 110 (340)
T ss_dssp HHHHHHCSEEEECCSTTHH--HHHHHH---HHHTTCEEEECTTS
T ss_pred hHhhcCCCEEEECCCCchh--HHHHHH---HHHcCCeEEEeCCC
Confidence 33 3579999999994433 333333 23345555565554
No 461
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=92.55 E-value=0.062 Score=54.66 Aligned_cols=37 Identities=16% Similarity=0.145 Sum_probs=33.7
Q ss_pred CceeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHH
Q 004972 304 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEY 340 (721)
Q Consensus 304 ~~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~ 340 (721)
.++||.|.|+|.+|+.++..|.+.|++|++++++++.
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~ 38 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQP 38 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTSC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCccc
Confidence 3578999999999999999999999999999998654
No 462
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=92.44 E-value=0.11 Score=53.73 Aligned_cols=34 Identities=15% Similarity=0.283 Sum_probs=31.7
Q ss_pred eeEEEEcC-CCCcHHHHHHHHHCCCceEEEeCCHH
Q 004972 306 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSE 339 (721)
Q Consensus 306 ~kI~VIG~-G~mG~~iA~~la~~G~~V~l~d~~~~ 339 (721)
++|.|+|+ |.+|+.++..|++.|++|++++|+++
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~ 46 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNS 46 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTC
T ss_pred CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCC
Confidence 58999996 99999999999999999999999875
No 463
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=92.42 E-value=0.15 Score=52.19 Aligned_cols=34 Identities=24% Similarity=0.289 Sum_probs=31.6
Q ss_pred ceeEEEEcC-CCCcHHHHHHHHHCCCceEEEeCCH
Q 004972 305 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNS 338 (721)
Q Consensus 305 ~~kI~VIG~-G~mG~~iA~~la~~G~~V~l~d~~~ 338 (721)
+++|.|+|+ |.+|+.++..|++.|++|++.+|+.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 38 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRES 38 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCc
Confidence 568999997 9999999999999999999999974
No 464
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=92.31 E-value=0.05 Score=53.00 Aligned_cols=78 Identities=18% Similarity=0.194 Sum_probs=49.2
Q ss_pred eeEEEEcCCCCcHHHHHHHHH-CCCce-EEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc-ccc
Q 004972 306 RKVAVIGGGLMGSGIATAHIL-NNIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 382 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~-~G~~V-~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l 382 (721)
.+|+|||+|.+|..++..+.. .|+++ -++|.+++..... -.| . .+...+++ +.+
T Consensus 81 ~rV~IIGaG~~G~~la~~~~~~~g~~iVg~~D~dp~k~g~~------------i~g----------v-~V~~~~dl~ell 137 (211)
T 2dt5_A 81 WGLCIVGMGRLGSALADYPGFGESFELRGFFDVDPEKVGRP------------VRG----------G-VIEHVDLLPQRV 137 (211)
T ss_dssp EEEEEECCSHHHHHHHHCSCCCSSEEEEEEEESCTTTTTCE------------ETT----------E-EEEEGGGHHHHS
T ss_pred CEEEEECccHHHHHHHHhHhhcCCcEEEEEEeCCHHHHhhh------------hcC----------C-eeecHHhHHHHH
Confidence 689999999999999985322 26654 5889888753221 001 0 12224445 223
Q ss_pred C-CCCEEEEcccCChHHHHHHHHHHHh
Q 004972 383 K-DVDMVIEAVIESVPLKQKIFSELEK 408 (721)
Q Consensus 383 ~-~aDlVIeavpe~~~~k~~v~~~l~~ 408 (721)
+ ++|.||+|+| ....+++...+..
T Consensus 138 ~~~ID~ViIA~P--s~~~~ei~~~l~~ 162 (211)
T 2dt5_A 138 PGRIEIALLTVP--REAAQKAADLLVA 162 (211)
T ss_dssp TTTCCEEEECSC--HHHHHHHHHHHHH
T ss_pred HcCCCEEEEeCC--chhHHHHHHHHHH
Confidence 3 6899999999 5555566666544
No 465
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=92.27 E-value=0.15 Score=53.37 Aligned_cols=36 Identities=17% Similarity=0.012 Sum_probs=33.9
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHH
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLL 342 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~ 342 (721)
++|.|+|.|..|..++..|.+.|+ |+++|++++.++
T Consensus 116 ~~viI~G~G~~g~~l~~~L~~~g~-v~vid~~~~~~~ 151 (336)
T 1lnq_A 116 RHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKK 151 (336)
T ss_dssp CEEEEESCCHHHHHHHTTGGGSCE-EEEESCGGGHHH
T ss_pred CCEEEECCcHHHHHHHHHHHhCCc-EEEEeCChhhhh
Confidence 479999999999999999999999 999999999876
No 466
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=92.27 E-value=0.056 Score=59.85 Aligned_cols=35 Identities=29% Similarity=0.383 Sum_probs=31.7
Q ss_pred ceeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHH
Q 004972 305 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSE 339 (721)
Q Consensus 305 ~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~ 339 (721)
|++|.|||+|.-|.+-|..|+++|++|++++.++.
T Consensus 1 Mk~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~ 35 (501)
T 4dgk_A 1 MKPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDK 35 (501)
T ss_dssp CCCEEEECCHHHHHHHHHHHHHTTCCEEEECCC--
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCC
Confidence 68999999999999999999999999999998754
No 467
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=92.22 E-value=0.15 Score=53.36 Aligned_cols=35 Identities=20% Similarity=0.197 Sum_probs=31.8
Q ss_pred ceeEEEEcC-CCCcHHHHHHHHHCCCceEEEeCCHH
Q 004972 305 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSE 339 (721)
Q Consensus 305 ~~kI~VIG~-G~mG~~iA~~la~~G~~V~l~d~~~~ 339 (721)
.++|.|.|+ |.+|+.++..|.+.|++|++++++..
T Consensus 25 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 60 (351)
T 3ruf_A 25 PKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFST 60 (351)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSS
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 468999996 99999999999999999999999654
No 468
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=92.21 E-value=0.098 Score=55.31 Aligned_cols=104 Identities=18% Similarity=0.147 Sum_probs=56.5
Q ss_pred eeEEEEc-CCCCcHHHHHHHHHCC-CceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceec-cCcccc
Q 004972 306 RKVAVIG-GGLMGSGIATAHILNN-IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGV-LDYSEF 382 (721)
Q Consensus 306 ~kI~VIG-~G~mG~~iA~~la~~G-~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~-~~~~~l 382 (721)
.||+|+| .|.+|..+...|.++. ++|+.+..++....+. +........ ...+.... ..+... .+.+.+
T Consensus 9 ~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~~---~~~~~~~~~-~~~~~~~~-----~~~~~~~~~~~~~ 79 (354)
T 1ys4_A 9 IKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAGKK---YKDACYWFQ-DRDIPENI-----KDMVVIPTDPKHE 79 (354)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSB---HHHHSCCCC-SSCCCHHH-----HTCBCEESCTTSG
T ss_pred ceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEccccccccc---HHHhccccc-ccccccCc-----eeeEEEeCCHHHH
Confidence 6899999 7999999999988764 5777664332211000 000000000 00011110 012111 234334
Q ss_pred -C-CCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCC
Q 004972 383 -K-DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI 423 (721)
Q Consensus 383 -~-~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~ 423 (721)
+ ++|+||+|+| .....++...+. ..++.++++++..
T Consensus 80 ~~~~~DvV~~atp--~~~~~~~a~~~~---~aG~~VId~s~~~ 117 (354)
T 1ys4_A 80 EFEDVDIVFSALP--SDLAKKFEPEFA---KEGKLIFSNASAY 117 (354)
T ss_dssp GGTTCCEEEECCC--HHHHHHHHHHHH---HTTCEEEECCSTT
T ss_pred hcCCCCEEEECCC--chHHHHHHHHHH---HCCCEEEECCchh
Confidence 6 8999999998 555455554443 4567788887764
No 469
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=92.18 E-value=0.068 Score=56.69 Aligned_cols=33 Identities=30% Similarity=0.353 Sum_probs=30.6
Q ss_pred eEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHH
Q 004972 307 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSE 339 (721)
Q Consensus 307 kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~ 339 (721)
-|.|||+|.-|.+.|..|+++|++|+++|+.++
T Consensus 6 DViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~ 38 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPE 38 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 399999999999999999999999999998653
No 470
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=92.17 E-value=0.15 Score=54.00 Aligned_cols=99 Identities=18% Similarity=0.244 Sum_probs=56.6
Q ss_pred ceeEEEEc-CCCCcHHHHHHHHHCCC-ceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCcccc
Q 004972 305 VRKVAVIG-GGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF 382 (721)
Q Consensus 305 ~~kI~VIG-~G~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l 382 (721)
..||+|+| .|.+|..+.+.|.+... +|+.+....+.-.+ +...... . .+.. ...+.... .+.+
T Consensus 16 ~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~----~~~~~~~-~-~~~v--------~~dl~~~~-~~~~ 80 (359)
T 1xyg_A 16 DIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQS----MESVFPH-L-RAQK--------LPTLVSVK-DADF 80 (359)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSC----HHHHCGG-G-TTSC--------CCCCBCGG-GCCG
T ss_pred CcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCC----HHHhCch-h-cCcc--------cccceecc-hhHh
Confidence 35899999 79999999999988753 77766543321111 1110000 0 0100 00122222 2234
Q ss_pred CCCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCC
Q 004972 383 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 424 (721)
Q Consensus 383 ~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~ 424 (721)
.++|+||+|+|.... .+. ...+ ..++.++++++...
T Consensus 81 ~~vDvVf~atp~~~s--~~~---a~~~-~aG~~VId~sa~~R 116 (359)
T 1xyg_A 81 STVDAVFCCLPHGTT--QEI---IKEL-PTALKIVDLSADFR 116 (359)
T ss_dssp GGCSEEEECCCTTTH--HHH---HHTS-CTTCEEEECSSTTT
T ss_pred cCCCEEEEcCCchhH--HHH---HHHH-hCCCEEEECCcccc
Confidence 689999999985443 222 2334 66788889888654
No 471
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=92.16 E-value=0.25 Score=51.98 Aligned_cols=35 Identities=20% Similarity=0.288 Sum_probs=32.8
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHH
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEY 340 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~ 340 (721)
++|+|+|.|.+|...|..+...|.+|+++|+++++
T Consensus 176 ktV~I~G~GnVG~~~A~~l~~~GakVvvsD~~~~~ 210 (355)
T 1c1d_A 176 LTVLVQGLGAVGGSLASLAAEAGAQLLVADTDTER 210 (355)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCccH
Confidence 68999999999999999999999999999999764
No 472
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=92.12 E-value=0.19 Score=51.49 Aligned_cols=34 Identities=24% Similarity=0.296 Sum_probs=31.4
Q ss_pred ceeEEEEcC-CCCcHHHHHHHHHCCCceEEEeCCH
Q 004972 305 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNS 338 (721)
Q Consensus 305 ~~kI~VIG~-G~mG~~iA~~la~~G~~V~l~d~~~ 338 (721)
+++|.|+|+ |.+|+.++..|++.|++|++.+|+.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 38 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPE 38 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCC
Confidence 468999996 9999999999999999999999983
No 473
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=92.11 E-value=0.24 Score=52.09 Aligned_cols=70 Identities=13% Similarity=0.111 Sum_probs=43.1
Q ss_pred eeEEEEcCCCCcH-HHHHHHHHC-CCceE-EEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCccc-
Q 004972 306 RKVAVIGGGLMGS-GIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE- 381 (721)
Q Consensus 306 ~kI~VIG~G~mG~-~iA~~la~~-G~~V~-l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~- 381 (721)
.||+|||+|.||. ..+..+... +++|+ ++|++ ..+...+. .. ...+...++++.
T Consensus 3 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~--~~~~~a~~--------~~------------~~~~~~~~~~~~l 60 (349)
T 3i23_A 3 VKMGFIGFGKSANRYHLPYVMIRETLEVKTIFDLH--VNEKAAAP--------FK------------EKGVNFTADLNEL 60 (349)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECTT--CCHHHHHH--------HH------------TTTCEEESCTHHH
T ss_pred eEEEEEccCHHHHHHHHHHHhhCCCeEEEEEECCC--HHHHHHHh--------hC------------CCCCeEECCHHHH
Confidence 5899999999998 455556544 67765 88887 21211100 00 012445566633
Q ss_pred cC--CCCEEEEcccCChH
Q 004972 382 FK--DVDMVIEAVIESVP 397 (721)
Q Consensus 382 l~--~aDlVIeavpe~~~ 397 (721)
++ +.|+|++|+|....
T Consensus 61 l~~~~~D~V~i~tp~~~h 78 (349)
T 3i23_A 61 LTDPEIELITICTPAHTH 78 (349)
T ss_dssp HSCTTCCEEEECSCGGGH
T ss_pred hcCCCCCEEEEeCCcHHH
Confidence 44 48999999995443
No 474
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=91.99 E-value=0.097 Score=49.10 Aligned_cols=33 Identities=24% Similarity=0.278 Sum_probs=31.2
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCH
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 338 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~ 338 (721)
.+|.|||+|..|..+|..|++.|.+|+++++++
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~ 34 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGR 34 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 579999999999999999999999999999875
No 475
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=91.98 E-value=0.086 Score=56.50 Aligned_cols=35 Identities=23% Similarity=0.281 Sum_probs=32.3
Q ss_pred ceeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHH
Q 004972 305 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSE 339 (721)
Q Consensus 305 ~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~ 339 (721)
..+|.|||+|..|...|..|++.|++|+++|+++.
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 39 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQ 39 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 35899999999999999999999999999998754
No 476
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=91.95 E-value=0.039 Score=53.66 Aligned_cols=80 Identities=20% Similarity=0.283 Sum_probs=50.6
Q ss_pred ceeEEEEcCCCCcHHHHHHH--HHCCCce-EEEeCCHH-HHHH-HHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc
Q 004972 305 VRKVAVIGGGLMGSGIATAH--ILNNIYV-VLKEVNSE-YLLK-GIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 379 (721)
Q Consensus 305 ~~kI~VIG~G~mG~~iA~~l--a~~G~~V-~l~d~~~~-~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~ 379 (721)
..+|+|+|+|.+|..++..+ ...|+++ -++|.+++ .... . + .| + .+...+++
T Consensus 84 ~~~V~IvGaG~lG~aLa~~~~~~~~g~~iVg~~D~dp~~kiG~~~-----------i-~G-v----------pV~~~~dL 140 (212)
T 3keo_A 84 TTNVMLVGCGNIGRALLHYRFHDRNKMQISMAFDLDSNDLVGKTT-----------E-DG-I----------PVYGISTI 140 (212)
T ss_dssp CEEEEEECCSHHHHHHTTCCCCTTSSEEEEEEEECTTSTTTTCBC-----------T-TC-C----------BEEEGGGH
T ss_pred CCEEEEECcCHHHHHHHHhhhcccCCeEEEEEEeCCchhccCcee-----------E-CC-e----------EEeCHHHH
Confidence 46899999999999999873 3456664 48899887 5211 0 0 01 0 12223444
Q ss_pred -ccc--CCCCEEEEcccCChHHHHHHHHHHHhh
Q 004972 380 -SEF--KDVDMVIEAVIESVPLKQKIFSELEKA 409 (721)
Q Consensus 380 -~~l--~~aDlVIeavpe~~~~k~~v~~~l~~~ 409 (721)
+.+ .+.|.+|+|+| ....+++...+.+.
T Consensus 141 ~~~v~~~~Id~vIIAvP--s~~aq~v~d~lv~~ 171 (212)
T 3keo_A 141 NDHLIDSDIETAILTVP--STEAQEVADILVKA 171 (212)
T ss_dssp HHHC-CCSCCEEEECSC--GGGHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEecC--chhHHHHHHHHHHc
Confidence 223 36899999999 44556666666543
No 477
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=91.90 E-value=0.1 Score=54.98 Aligned_cols=33 Identities=21% Similarity=0.308 Sum_probs=30.7
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCH
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 338 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~ 338 (721)
..|.|||+|.+|.++|..|++.|++|+++|+..
T Consensus 7 ~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~ 39 (363)
T 1c0p_A 7 KRVVVLGSGVIGLSSALILARKGYSVHILARDL 39 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCEEEEEeccC
Confidence 479999999999999999999999999999753
No 478
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=91.88 E-value=0.32 Score=50.83 Aligned_cols=37 Identities=24% Similarity=0.349 Sum_probs=27.9
Q ss_pred eeEEEEcCCCCcHHHHHHHHHC-CCceEEE-eC--CHHHHH
Q 004972 306 RKVAVIGGGLMGSGIATAHILN-NIYVVLK-EV--NSEYLL 342 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~-G~~V~l~-d~--~~~~~~ 342 (721)
.||||+|+|.+|..+++.+..+ +.+|+.+ |+ +++.+.
T Consensus 4 ikVgI~G~G~iGr~~~R~l~~~~~vevvaI~d~~~~~~~~a 44 (335)
T 1u8f_O 4 VKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMV 44 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHH
T ss_pred eEEEEEccCHHHHHHHHHHHcCCCcEEEEecCCCCCHHHHH
Confidence 5899999999999999998764 5777644 43 555443
No 479
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=91.85 E-value=0.042 Score=62.19 Aligned_cols=33 Identities=21% Similarity=0.452 Sum_probs=30.2
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCC-ceEEEeCCH
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNS 338 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~-~V~l~d~~~ 338 (721)
.+|.|||+|..|+.++..|++.|. +++++|.+.
T Consensus 18 s~VlVVGaGGLGsevak~La~aGVG~ItlvD~D~ 51 (640)
T 1y8q_B 18 GRVLVVGAGGIGCELLKNLVLTGFSHIDLIDLDT 51 (640)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEEECCB
T ss_pred CeEEEECcCHHHHHHHHHHHHcCCCeEEEecCCE
Confidence 589999999999999999999998 899999753
No 480
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=91.82 E-value=0.068 Score=55.97 Aligned_cols=34 Identities=21% Similarity=0.363 Sum_probs=31.4
Q ss_pred ceeEEEEcCCCCcHHHHHHHHH---CCCceEEEeCCH
Q 004972 305 VRKVAVIGGGLMGSGIATAHIL---NNIYVVLKEVNS 338 (721)
Q Consensus 305 ~~kI~VIG~G~mG~~iA~~la~---~G~~V~l~d~~~ 338 (721)
|.+|.|||+|..|.+.|..|++ .|++|+++|++.
T Consensus 1 m~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~ 37 (342)
T 3qj4_A 1 MAQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKAD 37 (342)
T ss_dssp CEEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSS
T ss_pred CCcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCC
Confidence 4689999999999999999999 999999999864
No 481
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=91.82 E-value=0.47 Score=49.96 Aligned_cols=104 Identities=25% Similarity=0.324 Sum_probs=56.4
Q ss_pred ceeEEEEc-CCCCcHHHHHHHHHCC-CceEEEe-CCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceecc-Ccc
Q 004972 305 VRKVAVIG-GGLMGSGIATAHILNN-IYVVLKE-VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL-DYS 380 (721)
Q Consensus 305 ~~kI~VIG-~G~mG~~iA~~la~~G-~~V~l~d-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~-~~~ 380 (721)
+.||+|+| .|.+|..+...|.... .+|+.+. .+...-+. +......+ ..+.+.... ..+.+.+ +.+
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~~~~g~~----~~~~~~~~-~~~~~~~~~-----~~~~~~~~d~~ 73 (350)
T 2ep5_A 4 KIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPSKIGKK----YKDAVKWI-EQGDIPEEV-----QDLPIVSTNYE 73 (350)
T ss_dssp CEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCGGGTTSB----HHHHCCCC-SSSSCCHHH-----HTCBEECSSGG
T ss_pred CcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecChhhcCCC----HHHhcCcc-cccccccCC-----ceeEEeeCCHH
Confidence 46899999 7999999999887653 4776664 22211110 00000000 001111100 1122221 334
Q ss_pred ccCCCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCC
Q 004972 381 EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI 423 (721)
Q Consensus 381 ~l~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~ 423 (721)
.+.++|+|++|+| .....++...+ +..++.++++++..
T Consensus 74 ~~~~vDvVf~atp--~~~s~~~a~~~---~~aG~~VId~s~~~ 111 (350)
T 2ep5_A 74 DHKDVDVVLSALP--NELAESIELEL---VKNGKIVVSNASPF 111 (350)
T ss_dssp GGTTCSEEEECCC--HHHHHHHHHHH---HHTTCEEEECSSTT
T ss_pred HhcCCCEEEECCC--hHHHHHHHHHH---HHCCCEEEECCccc
Confidence 4578999999998 44444554443 34566678887764
No 482
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=91.65 E-value=0.14 Score=53.36 Aligned_cols=37 Identities=16% Similarity=0.102 Sum_probs=26.4
Q ss_pred HcCCCHHHHHHHHHhcCCCccHHHHHHhhchHHHHHHH
Q 004972 507 SLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATS 544 (721)
Q Consensus 507 ~~Gv~~~~ID~a~~~~G~p~Gpf~~~D~~Gld~~~~~~ 544 (721)
++|.+.+++-+-....||.- |==..|.-|.|...++.
T Consensus 183 ~~g~~f~~~l~~Aq~~GyaE-~DP~~Dv~G~D~a~Kl~ 219 (325)
T 3ing_A 183 ANGRSLRDVVDDAIKKGIAE-SNPQDDLNGLDAARKSV 219 (325)
T ss_dssp HTTCCHHHHHHHHHHHTCSC-SSTHHHHTTHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHcCCCC-CCcccccCChhHHHHHH
Confidence 67888888777776667631 22257999999988753
No 483
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=91.57 E-value=0.28 Score=48.84 Aligned_cols=76 Identities=16% Similarity=0.010 Sum_probs=50.2
Q ss_pred ceeEEEEcCCCCcHHHHHHHHHCCCce-EEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCcc-cc
Q 004972 305 VRKVAVIGGGLMGSGIATAHILNNIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS-EF 382 (721)
Q Consensus 305 ~~kI~VIG~G~mG~~iA~~la~~G~~V-~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~-~l 382 (721)
-++|+++|+|.||..++.. . ++++ .+|+ ++ . +.+ .+..++|++ .+
T Consensus 12 ~~rV~i~G~GaIG~~v~~~--~-~leLv~v~~---~k---~--------------gel----------gv~a~~d~d~ll 58 (253)
T 1j5p_A 12 HMTVLIIGMGNIGKKLVEL--G-NFEKIYAYD---RI---S--------------KDI----------PGVVRLDEFQVP 58 (253)
T ss_dssp CCEEEEECCSHHHHHHHHH--S-CCSEEEEEC---SS---C--------------CCC----------SSSEECSSCCCC
T ss_pred cceEEEECcCHHHHHHHhc--C-CcEEEEEEe---cc---c--------------ccc----------CceeeCCHHHHh
Confidence 3589999999999999998 4 8876 4666 21 0 101 234566674 45
Q ss_pred CCCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEe
Q 004972 383 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 418 (721)
Q Consensus 383 ~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s 418 (721)
+++|+||||.+ .+...+ .+.+.+..+.=+++
T Consensus 59 a~pD~VVe~A~--~~av~e---~~~~iL~aG~dvv~ 89 (253)
T 1j5p_A 59 SDVSTVVECAS--PEAVKE---YSLQILKNPVNYII 89 (253)
T ss_dssp TTCCEEEECSC--HHHHHH---HHHHHTTSSSEEEE
T ss_pred hCCCEEEECCC--HHHHHH---HHHHHHHCCCCEEE
Confidence 79999999986 443333 35566777654444
No 484
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=91.53 E-value=0.52 Score=48.25 Aligned_cols=35 Identities=20% Similarity=0.271 Sum_probs=31.4
Q ss_pred eeEEEEcC-CCCcHHHHHHHHHCCCceEEEeCCHHH
Q 004972 306 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEY 340 (721)
Q Consensus 306 ~kI~VIG~-G~mG~~iA~~la~~G~~V~l~d~~~~~ 340 (721)
++|.|.|+ |.+|+.++..|++.|++|++.+++++.
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 38 (311)
T 3m2p_A 3 LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGN 38 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC-
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCc
Confidence 68999995 999999999999999999999998443
No 485
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=91.49 E-value=0.54 Score=49.30 Aligned_cols=152 Identities=13% Similarity=0.131 Sum_probs=75.8
Q ss_pred CceeEEEEcCCCCcHHHHHHHHHC-CCceEEEeC---CHHHHHHHHHHHHHHHHhhhhcCCCCHHH--HHHhh----cCc
Q 004972 304 GVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEV---NSEYLLKGIKTIEANVRGLVTRGKLTQDK--ANNAL----KML 373 (721)
Q Consensus 304 ~~~kI~VIG~G~mG~~iA~~la~~-G~~V~l~d~---~~~~~~~~~~~~~~~~~~~~~~g~~~~~~--~~~~~----~~i 373 (721)
.+.||+|+|+|.+|..+.+.+.++ .++|+.++- +.+.+... +...-..|.+...- .+..+ ..+
T Consensus 16 ~~ikVgI~G~G~iGr~llR~l~~~p~veivaindp~~~~~~~a~l-------l~~ds~hg~~~~~v~~~~~~l~v~g~~i 88 (354)
T 3cps_A 16 FQGTLGINGFGRIGRLVLRACMERNDITVVAINDPFMDVEYMAYL-------LKYDSVHGNFNGTVEVSGKDLCINGKVV 88 (354)
T ss_dssp --CEEEEECCSHHHHHHHHHHHTCSSCEEEEEECTTSCHHHHHHH-------HHCCTTTCSCSSCEEECC-CEEETTEEE
T ss_pred cceEEEEECCCHHHHHHHHHHHcCCCeEEEEecCCCCChhHhhhh-------hcccccCCCCCCcEEEeCCEEEECCeEE
Confidence 356999999999999999999876 577776553 22222111 11111112211000 00000 112
Q ss_pred eecc--Ccccc----CCCCEEEEcccCChHHHHHHHHHHHhhCCCCe--EEEecCCCCCHHHHhcccCCCCcEEEecCCC
Q 004972 374 KGVL--DYSEF----KDVDMVIEAVIESVPLKQKIFSELEKACPPHC--ILATNTSTIDLNIVGEKTSSQDRIIGAHFFS 445 (721)
Q Consensus 374 ~~~~--~~~~l----~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~--ii~s~ts~~~i~~l~~~~~~~~r~ig~h~~~ 445 (721)
.... +.+.+ .++|+||+|.|-... .+ ....++..++ +|+|+++.-. .|.-+.| .|
T Consensus 89 ~v~~~~dp~~i~w~~~~vDvV~eatg~~~s--~e---~a~~~l~~GakkvVId~padd~---------~p~~V~G---VN 151 (354)
T 3cps_A 89 KVFQAKDPAEIPWGASGAQIVCESTGVFTT--EE---KASLHLKGGAKKVIISAPPKDN---------VPMYVMG---VN 151 (354)
T ss_dssp EEECCSCGGGCCHHHHTCCEEEECSSSCCS--HH---HHGGGGTTTCSEEEESSCCSSC---------CCBCCTT---TT
T ss_pred EEEecCChHHCCcccCCCCEEEECCCchhh--HH---HHHHHHHcCCcEEEEeCCCCCC---------CCEEEec---cC
Confidence 2221 33433 579999999984333 22 2345566677 8888776310 0101111 12
Q ss_pred CCCCCCe-eEEecCCCCCHHH-HHHHHHHHHHcCCe
Q 004972 446 PAHVMPL-LEIVRTERTSAQV-ILDLMTVGKIIKKV 479 (721)
Q Consensus 446 p~~~~~l-vEiv~~~~t~~e~-~~~~~~l~~~lG~~ 479 (721)
+..+.+. ..||..+++.... .-.++++.+..|-.
T Consensus 152 ~~~~~~~~~~IISNpsCtTn~lap~lkpL~~~~gI~ 187 (354)
T 3cps_A 152 NTEYDPSKFNVISNASCTTNCLAPLAKIINDKFGIV 187 (354)
T ss_dssp GGGCCTTTCSEEECCCHHHHHHHHHHHHHHHHTCEE
T ss_pred HHHhCcCCCcEEECCCcHHHHHHHHHHHHHHhCCee
Confidence 1111111 2377777765554 44566666777743
No 486
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=91.25 E-value=0.12 Score=52.98 Aligned_cols=92 Identities=20% Similarity=0.051 Sum_probs=60.0
Q ss_pred ceeEEEEcC-CCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCccc-c
Q 004972 305 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE-F 382 (721)
Q Consensus 305 ~~kI~VIG~-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-l 382 (721)
..||+|+|+ |.||..++..+.+.|++ .++.+++... +. ....+....++++ .
T Consensus 7 ~~~VaVvGasG~~G~~~~~~l~~~g~~-~v~~VnP~~~-----------------g~--------~i~G~~vy~sl~el~ 60 (288)
T 1oi7_A 7 ETRVLVQGITGREGQFHTKQMLTYGTK-IVAGVTPGKG-----------------GM--------EVLGVPVYDTVKEAV 60 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCE-EEEEECTTCT-----------------TC--------EETTEEEESSHHHHH
T ss_pred CCEEEEECCCCCHHHHHHHHHHHcCCe-EEEEECCCCC-----------------Cc--------eECCEEeeCCHHHHh
Confidence 468999998 99999999999888998 4456555420 00 0012444555533 3
Q ss_pred C--CCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHH
Q 004972 383 K--DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 426 (721)
Q Consensus 383 ~--~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~ 426 (721)
+ ++|++|+++| .+...+++.+..+. .-..++ ..|++++..
T Consensus 61 ~~~~~Dv~Ii~vp--~~~~~~~~~ea~~~-Gi~~vV-i~t~G~~~~ 102 (288)
T 1oi7_A 61 AHHEVDASIIFVP--APAAADAALEAAHA-GIPLIV-LITEGIPTL 102 (288)
T ss_dssp HHSCCSEEEECCC--HHHHHHHHHHHHHT-TCSEEE-ECCSCCCHH
T ss_pred hcCCCCEEEEecC--HHHHHHHHHHHHHC-CCCEEE-EECCCCCHH
Confidence 4 7999999999 77777777776553 223333 345666654
No 487
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=91.19 E-value=0.1 Score=54.15 Aligned_cols=33 Identities=27% Similarity=0.299 Sum_probs=31.0
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCH
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 338 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~ 338 (721)
.+|.|||+|..|.++|..|++.|++|+++|+++
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~ 35 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSR 35 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCcEEEEECCC
Confidence 479999999999999999999999999999875
No 488
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=91.15 E-value=0.12 Score=54.38 Aligned_cols=101 Identities=16% Similarity=0.100 Sum_probs=57.3
Q ss_pred CCceeEEEEc-CCCCcHHHHHHHHHCC-----C-ceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCcee
Q 004972 303 RGVRKVAVIG-GGLMGSGIATAHILNN-----I-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG 375 (721)
Q Consensus 303 ~~~~kI~VIG-~G~mG~~iA~~la~~G-----~-~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 375 (721)
|.|+||+|+| .|.+|..+...|.+++ . +|+.+......-+. +... .+.+.. ...+..
T Consensus 7 M~m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~--------~~~~--~~~l~~------~~~~~~ 70 (352)
T 2nqt_A 7 ANATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGST--------LGEH--HPHLTP------LAHRVV 70 (352)
T ss_dssp CSCEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSB--------GGGT--CTTCGG------GTTCBC
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCc--------hhhh--cccccc------cceeee
Confidence 3457999999 7999999999999887 3 66666432110000 0000 000000 001111
Q ss_pred c-cCccccCCCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCH
Q 004972 376 V-LDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL 425 (721)
Q Consensus 376 ~-~~~~~l~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i 425 (721)
. .+.+.+.++|+||.|+|.... +++... + ..++.++++++....
T Consensus 71 ~~~~~~~~~~~DvVf~alg~~~s--~~~~~~---~-~~G~~vIDlSa~~R~ 115 (352)
T 2nqt_A 71 EPTEAAVLGGHDAVFLALPHGHS--AVLAQQ---L-SPETLIIDCGADFRL 115 (352)
T ss_dssp EECCHHHHTTCSEEEECCTTSCC--HHHHHH---S-CTTSEEEECSSTTTC
T ss_pred ccCCHHHhcCCCEEEECCCCcch--HHHHHH---H-hCCCEEEEECCCccC
Confidence 1 123445689999999995432 333333 2 457888888887653
No 489
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=91.15 E-value=0.22 Score=50.37 Aligned_cols=37 Identities=19% Similarity=0.182 Sum_probs=32.7
Q ss_pred eeEEEEcC-CCCcHHHHHHHHHC--CCceEEEeCCHHHHH
Q 004972 306 RKVAVIGG-GLMGSGIATAHILN--NIYVVLKEVNSEYLL 342 (721)
Q Consensus 306 ~kI~VIG~-G~mG~~iA~~la~~--G~~V~l~d~~~~~~~ 342 (721)
++|.|.|+ |.+|+.++..|++. |++|++.+++++..+
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~ 40 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKAS 40 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTH
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHh
Confidence 46899997 99999999999998 999999999876543
No 490
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=91.11 E-value=0.77 Score=47.92 Aligned_cols=30 Identities=23% Similarity=0.256 Sum_probs=24.7
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCC---CceEEEe
Q 004972 306 RKVAVIGGGLMGSGIATAHILNN---IYVVLKE 335 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G---~~V~l~d 335 (721)
.||||+|+|.+|..+.+.+..++ ++|+.++
T Consensus 3 ikVgI~G~G~IGr~v~r~l~~~~~~~~evvaIn 35 (339)
T 3b1j_A 3 IRVAINGFGRIGRNFLRCWFGRQNTDLEVVAIN 35 (339)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSCCSEEEEEEE
T ss_pred eEEEEECCCHHHHHHHHHHHhcCCCCeEEEEEe
Confidence 48999999999999999998863 5666544
No 491
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=91.07 E-value=0.7 Score=45.99 Aligned_cols=37 Identities=19% Similarity=0.227 Sum_probs=31.3
Q ss_pred eEEEEcC-CCCcHHHHHHHHHCCCceEEEeCCHHHHHH
Q 004972 307 KVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLK 343 (721)
Q Consensus 307 kI~VIG~-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~ 343 (721)
+|-|-|+ +-+|.++|..|++.|.+|++.|++++.++.
T Consensus 4 ~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~ 41 (247)
T 3ged_A 4 GVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSAD 41 (247)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred EEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 4556675 779999999999999999999999887654
No 492
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=91.07 E-value=1.2 Score=44.42 Aligned_cols=41 Identities=32% Similarity=0.364 Sum_probs=33.7
Q ss_pred eEE-EEcC-CCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHH
Q 004972 307 KVA-VIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKT 347 (721)
Q Consensus 307 kI~-VIG~-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~ 347 (721)
|++ |-|+ +-+|.++|..|++.|..|+++|++++.++...+.
T Consensus 8 KvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~ 50 (254)
T 4fn4_A 8 KVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQE 50 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHH
Confidence 455 5565 6689999999999999999999999988776543
No 493
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=91.04 E-value=0.85 Score=49.89 Aligned_cols=93 Identities=23% Similarity=0.279 Sum_probs=59.5
Q ss_pred CceeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc----
Q 004972 304 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY---- 379 (721)
Q Consensus 304 ~~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~---- 379 (721)
+.++|.|+|+|.+|..+|..|. .+++|.+++.++++++.+.+.+.+ ..+=.|- .+|.
T Consensus 234 ~~~~v~I~GgG~ig~~lA~~L~-~~~~v~iIE~d~~r~~~la~~l~~---~~Vi~GD---------------~td~~~L~ 294 (461)
T 4g65_A 234 PYRRIMIVGGGNIGASLAKRLE-QTYSVKLIERNLQRAEKLSEELEN---TIVFCGD---------------AADQELLT 294 (461)
T ss_dssp CCCEEEEECCSHHHHHHHHHHT-TTSEEEEEESCHHHHHHHHHHCTT---SEEEESC---------------TTCHHHHH
T ss_pred cccEEEEEcchHHHHHHHHHhh-hcCceEEEecCHHHHHHHHHHCCC---ceEEecc---------------ccchhhHh
Confidence 3578999999999999999874 569999999999998776432110 0011111 1121
Q ss_pred -cccCCCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEE
Q 004972 380 -SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 417 (721)
Q Consensus 380 -~~l~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~ 417 (721)
+.+.++|++|-+...|. ..-+...+++.+....+++
T Consensus 295 ee~i~~~D~~ia~T~~De--~Ni~~~llAk~~gv~kvIa 331 (461)
T 4g65_A 295 EENIDQVDVFIALTNEDE--TNIMSAMLAKRMGAKKVMV 331 (461)
T ss_dssp HTTGGGCSEEEECCSCHH--HHHHHHHHHHHTTCSEEEE
T ss_pred hcCchhhcEEEEcccCcH--HHHHHHHHHHHcCCccccc
Confidence 45789999997776432 2233344555555555554
No 494
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=90.99 E-value=0.12 Score=57.82 Aligned_cols=35 Identities=20% Similarity=0.377 Sum_probs=32.0
Q ss_pred CceeEEEEcCCCCcHHHHHHHHH---CCCceEEEeCCH
Q 004972 304 GVRKVAVIGGGLMGSGIATAHIL---NNIYVVLKEVNS 338 (721)
Q Consensus 304 ~~~kI~VIG~G~mG~~iA~~la~---~G~~V~l~d~~~ 338 (721)
++.+|.|||+|..|.+.|..|++ .|++|+++|+.+
T Consensus 4 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~ 41 (538)
T 2aqj_A 4 PIKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAA 41 (538)
T ss_dssp BCCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCC
Confidence 45689999999999999999999 999999999853
No 495
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=90.96 E-value=0.59 Score=49.34 Aligned_cols=142 Identities=15% Similarity=0.097 Sum_probs=76.0
Q ss_pred eeEEEEc-CCCCcHHHHHHHHHCCC---ceEEEeCCHHHHHHHHHHHHHHHHhhhh-cCCCCHHHHHHhhcCceec-cCc
Q 004972 306 RKVAVIG-GGLMGSGIATAHILNNI---YVVLKEVNSEYLLKGIKTIEANVRGLVT-RGKLTQDKANNALKMLKGV-LDY 379 (721)
Q Consensus 306 ~kI~VIG-~G~mG~~iA~~la~~G~---~V~l~d~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~i~~~-~~~ 379 (721)
.||+||| .|+.|.-+...|.+.++ ++.++...... .+ .+. .+ ..+.+. .+.
T Consensus 3 ~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~sa-G~-----------~~~~~~-----------~~~~~~~~~~ 59 (366)
T 3pwk_A 3 YTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSA-GK-----------SLKFKD-----------QDITIEETTE 59 (366)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTT-TC-----------EEEETT-----------EEEEEEECCT
T ss_pred cEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccccC-CC-----------cceecC-----------CCceEeeCCH
Confidence 4899999 59999999999999876 34444432111 00 000 00 011211 123
Q ss_pred cccCCCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhcccCCCCcEEEecCCCCCCCCCeeEEecCC
Q 004972 380 SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTE 459 (721)
Q Consensus 380 ~~l~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~~l~~~~~~~~r~ig~h~~~p~~~~~lvEiv~~~ 459 (721)
+.++++|+||+|.| ....++....+ +..++.++++++......- . | .++.-.|+..+..---+|.++
T Consensus 60 ~~~~~~Dvvf~a~~--~~~s~~~a~~~---~~~G~~vIDlSa~~R~~~~---~--p---~~vpevN~~~i~~~~~iIanp 126 (366)
T 3pwk_A 60 TAFEGVDIALFSAG--SSTSAKYAPYA---VKAGVVVVDNTSYFRQNPD---V--P---LVVPEVNAHALDAHNGIIACP 126 (366)
T ss_dssp TTTTTCSEEEECSC--HHHHHHHHHHH---HHTTCEEEECSSTTTTCTT---S--C---BCCHHHHGGGGTTCCSEEECC
T ss_pred HHhcCCCEEEECCC--hHhHHHHHHHH---HHCCCEEEEcCCccccCCC---c--e---EEEccCCHHHHcCCCCeEECC
Confidence 45789999999998 55555555554 3467788888886533210 0 0 011111111111101255555
Q ss_pred CCCH-HHHHHHHHHHHHcCCeeEEE
Q 004972 460 RTSA-QVILDLMTVGKIIKKVPVVV 483 (721)
Q Consensus 460 ~t~~-e~~~~~~~l~~~lG~~~v~v 483 (721)
++.+ ..+-.+.++.+..+-..+++
T Consensus 127 gC~tt~~~l~l~pL~~~~~i~~i~v 151 (366)
T 3pwk_A 127 NCSTIQMMVALEPVRQKWGLDRIIV 151 (366)
T ss_dssp CHHHHHHHHHHHHHHHHHCCSEEEE
T ss_pred CcHHHHHHHHHHHHHHhCCCcEEEE
Confidence 5544 34556677777777544444
No 496
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=90.94 E-value=0.11 Score=58.70 Aligned_cols=98 Identities=14% Similarity=0.150 Sum_probs=0.0
Q ss_pred CCCCCCCceeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceecc
Q 004972 298 IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL 377 (721)
Q Consensus 298 ~~~~~~~~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~ 377 (721)
++..... ++|.|+|.|.+|..+|..|.+.|++|+++|.+++.++... ..+.....+.+...+
T Consensus 342 ~~~~~~~-~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~--------~~i~gD~t~~~~L~~--------- 403 (565)
T 4gx0_A 342 IGEAPED-ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQESPVCNDH--------VVVYGDATVGQTLRQ--------- 403 (565)
T ss_dssp -----CC-CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCSSCCSS--------CEEESCSSSSTHHHH---------
T ss_pred hcCCCCC-CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChHHHhhcC--------CEEEeCCCCHHHHHh---------
Q ss_pred CccccCCCCEEEEcccCChHHHHHHHHHHHhhCCCC-eEEE
Q 004972 378 DYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPH-CILA 417 (721)
Q Consensus 378 ~~~~l~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~-~ii~ 417 (721)
..+++||.||.++++| ...-+...+.+.+.++ .+++
T Consensus 404 --agi~~ad~vi~~~~~d--~~ni~~~~~ak~l~~~~~iia 440 (565)
T 4gx0_A 404 --AGIDRASGIIVTTNDD--STNIFLTLACRHLHSHIRIVA 440 (565)
T ss_dssp --HTTTSCSEEEECCSCH--HHHHHHHHHHHHHCSSSEEEE
T ss_pred --cCccccCEEEEECCCc--hHHHHHHHHHHHHCCCCEEEE
No 497
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=90.91 E-value=0.49 Score=49.46 Aligned_cols=144 Identities=13% Similarity=0.111 Sum_probs=77.7
Q ss_pred ceeEEEEc-CCCCcHHHHHHHHHCC---CceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceec-cCc
Q 004972 305 VRKVAVIG-GGLMGSGIATAHILNN---IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGV-LDY 379 (721)
Q Consensus 305 ~~kI~VIG-~G~mG~~iA~~la~~G---~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~-~~~ 379 (721)
+.||+|+| .|.+|..+...|.+++ ++|+.+...... .+ .+. +. . ..+... .+.
T Consensus 3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~-G~-----------~~~---~~-----~--~~i~~~~~~~ 60 (336)
T 2r00_A 3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSE-GK-----------TYR---FN-----G--KTVRVQNVEE 60 (336)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTT-TC-----------EEE---ET-----T--EEEEEEEGGG
T ss_pred ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCC-CC-----------cee---ec-----C--ceeEEecCCh
Confidence 46899999 8999999999998874 466665521110 00 000 00 0 012221 122
Q ss_pred cccCCCCEEEEcccCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhcccCCCCcEEEecCCCCCCCCC--eeEEec
Q 004972 380 SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMP--LLEIVR 457 (721)
Q Consensus 380 ~~l~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~i~~l~~~~~~~~r~ig~h~~~p~~~~~--lvEiv~ 457 (721)
+.+.++|+||+|+| .....+....+ +..++.++++++...... . -..++.-.|+..+.. ...+|.
T Consensus 61 ~~~~~vDvVf~a~g--~~~s~~~a~~~---~~~G~~vId~s~~~R~~~--~------~~~~vpevN~~~i~~~~~~~iIa 127 (336)
T 2r00_A 61 FDWSQVHIALFSAG--GELSAKWAPIA---AEAGVVVIDNTSHFRYDY--D------IPLVVPEVNPEAIAEFRNRNIIA 127 (336)
T ss_dssp CCGGGCSEEEECSC--HHHHHHHHHHH---HHTTCEEEECSSTTTTCT--T------SCBCCTTTCGGGGGGGGGTTEEE
T ss_pred HHhcCCCEEEECCC--chHHHHHHHHH---HHcCCEEEEcCCccccCC--C------CCeEeccCCHHHhccccCCcEEE
Confidence 34578999999998 44444554443 345778888887654321 0 001111122221111 022666
Q ss_pred CCCCCHH-HHHHHHHHHHHcCCeeEEE
Q 004972 458 TERTSAQ-VILDLMTVGKIIKKVPVVV 483 (721)
Q Consensus 458 ~~~t~~e-~~~~~~~l~~~lG~~~v~v 483 (721)
.+++... .+-.+.++.+..|-..+++
T Consensus 128 np~C~tt~~~~~l~pL~~~~~i~~~~v 154 (336)
T 2r00_A 128 NPNCSTIQMLVALKPIYDAVGIERINV 154 (336)
T ss_dssp CCCHHHHHHHHHHHHHHHHHCEEEEEE
T ss_pred CCChHHHHHHHHHHHHHHhCCccEEEE
Confidence 6665444 4556777778777554444
No 498
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=90.83 E-value=0.11 Score=55.78 Aligned_cols=33 Identities=27% Similarity=0.247 Sum_probs=31.1
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCH
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 338 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~ 338 (721)
.+|.|||+|..|.+.|..|++.|++|+++|+++
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~ 38 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQK 38 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 579999999999999999999999999999874
No 499
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=90.74 E-value=0.26 Score=52.25 Aligned_cols=96 Identities=17% Similarity=0.278 Sum_probs=55.8
Q ss_pred ceeEEEEc-CCCCcHHHHH-HHHHCCC---ceEEEeCCHHHHHHHHHHHHHHHHhhhhcCCCCHHHHHHhhcCceeccCc
Q 004972 305 VRKVAVIG-GGLMGSGIAT-AHILNNI---YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 379 (721)
Q Consensus 305 ~~kI~VIG-~G~mG~~iA~-~la~~G~---~V~l~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~ 379 (721)
|.||+|+| .|.+|..+.. .+.+.++ +++++..+ .. -+ .+ . .+. |. . -.+....+.
T Consensus 1 m~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~-s~-G~---~v----~-~~~-g~-~--------i~~~~~~~~ 60 (367)
T 1t4b_A 1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTS-QL-GQ---AA----P-SFG-GT-T--------GTLQDAFDL 60 (367)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESS-ST-TS---BC----C-GGG-TC-C--------CBCEETTCH
T ss_pred CcEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeC-CC-CC---Cc----c-ccC-CC-c--------eEEEecCCh
Confidence 35899999 7999999999 6666655 34444443 11 00 00 0 000 10 0 011112223
Q ss_pred cccCCCCEEEEcccCChHHHHHHHHHHHhhCCCCe--EEEecCCCCCH
Q 004972 380 SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHC--ILATNTSTIDL 425 (721)
Q Consensus 380 ~~l~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~--ii~s~ts~~~i 425 (721)
+.++++|+||+|.| ....+++...+.+ .++ +++++++...+
T Consensus 61 ~~~~~~DvVf~a~g--~~~s~~~a~~~~~---~G~k~vVID~ss~~R~ 103 (367)
T 1t4b_A 61 EALKALDIIVTCQG--GDYTNEIYPKLRE---SGWQGYWIDAASSLRM 103 (367)
T ss_dssp HHHHTCSEEEECSC--HHHHHHHHHHHHH---TTCCCEEEECSSTTTT
T ss_pred HHhcCCCEEEECCC--chhHHHHHHHHHH---CCCCEEEEcCChhhcc
Confidence 34578999999998 6666666665543 343 88898887543
No 500
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=90.73 E-value=0.11 Score=56.55 Aligned_cols=33 Identities=12% Similarity=0.284 Sum_probs=31.3
Q ss_pred eeEEEEcCCCCcHHHHHHHHHCCCceEEEeCCH
Q 004972 306 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 338 (721)
Q Consensus 306 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~ 338 (721)
++|.|||+|..|...|..|++.|++|+++|+.+
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 579999999999999999999999999999875
Done!