Your job contains 1 sequence.
>004974
MASAGSLQLSHDLGLCRNQVFKKQFKNVMGRGKSHLLSATLTSRASFWPQDFRSFNLSGS
PYSQINPIPYRSNRIRSYNALQCSPQALKLVPGIAIIVFATWGLGPLMRQSRNLLLRKSD
NSWKKSKTHHVMTSYIQPLMLWTGAILICRALDPVVLPTEAGEVVKQRLLNFVRSLSTVL
AFAYCLSSLIQQAQKFFMETTDSGDARNMGFQFAGKAVYSAVWVASASLFMELLGFSTQK
WLTAGGLGTVLLTLAGREIFTNFLSSAMIHATRPFVLNEWIQTKIEGYEVSGTVEHVGWW
SPTIVRGEDREAVHIPNHKFTVNVVRNLSQKSHWRIKTHLAISHLDVHKINSIVADMRKV
LAKNPQVEQQRLHRRVFLDNINPENQALLVSILVSCFVKTSHHEEYLCVKEAILLDLLRV
ISHHRARLATPIRTVQKIFSDADLENVPFADTIYNRGGGASNRPLLLIEPPYRINGEDKT
KSQTRPSRSSGEQDGKTTPRLTPDVKADSKVSVSSKSDSKADAKIPEAPNSDTREDKNGA
AAHMSDPKVADKVTVKSTSKSFPKTKSKVAEISSSEPKVLGSTSDNPTKDRKVSDSKQPK
IVGQGNATQNSKIDNPSISSSGGSDKAGGLQESKQESNKLPSTQPPVSRPALEENIVLGV
ALEGSKRTLPIEEGMPSSQPVVKELTTANRNGNVSSTAEKEKKDGQIPSTRSATSGVSES
N
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 004974
(721 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2142414 - symbol:MSL2 "MSCS-like 2" species:37... 1607 2.5e-192 3
TAIR|locus:2015297 - symbol:MSL3 "MSCS-like 3" species:37... 1406 3.3e-159 3
UNIPROTKB|P0AEB5 - symbol:ynaI "mechanosensitive channel ... 218 2.9e-15 1
UNIPROTKB|Q83CN5 - symbol:CBU_1075 "Mechanosensitive ion ... 195 2.2e-12 1
TIGR_CMR|CBU_1075 - symbol:CBU_1075 "membrane protein, pu... 195 2.2e-12 1
TAIR|locus:2126061 - symbol:AT4G00290 species:3702 "Arabi... 124 0.00025 1
>TAIR|locus:2142414 [details] [associations]
symbol:MSL2 "MSCS-like 2" species:3702 "Arabidopsis
thaliana" [GO:0005886 "plasma membrane" evidence=ISM] [GO:0016020
"membrane" evidence=IEA;ISS] [GO:0055085 "transmembrane transport"
evidence=IEA] [GO:0005216 "ion channel activity" evidence=IGI]
[GO:0009526 "plastid envelope" evidence=IDA] [GO:0009657 "plastid
organization" evidence=IGI] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0010020 "chloroplast fission" evidence=IGI] InterPro:IPR006685
Pfam:PF00924 GO:GO:0016021 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009507 GO:GO:0031969 EMBL:AL353995 GO:GO:0005216
GO:GO:0010020 InterPro:IPR010920 SUPFAM:SSF50182 GO:GO:0004146
eggNOG:COG0668 EMBL:AK221831 EMBL:AK230015 EMBL:AK317509
IPI:IPI00533775 IPI:IPI00846450 IPI:IPI00991346 PIR:T49990
RefSeq:NP_001078567.1 RefSeq:NP_001190278.1 RefSeq:NP_568230.2
UniGene:At.48016 ProteinModelPortal:Q56X46 TCDB:1.A.23.7.1
PRIDE:Q56X46 EnsemblPlants:AT5G10490.1 GeneID:830913
KEGG:ath:AT5G10490 TAIR:At5g10490 HOGENOM:HOG000083399
InParanoid:Q56X46 OMA:YKINGED PhylomeDB:Q56X46
ProtClustDB:CLSN2680522 Genevestigator:Q56X46 GO:GO:0009526
Uniprot:Q56X46
Length = 673
Score = 1607 (570.8 bits), Expect = 2.5e-192, Sum P(3) = 2.5e-192
Identities = 305/426 (71%), Positives = 350/426 (82%)
Query: 76 RSYNALQCSPQALKLVPGIAIIVFATWGLGPLMRQSRNLLLRKSDNSWKKSKTHHVMTSY 135
+S+ +Q P KLVP +A++VF+ WGL P RQ RN+LL K+DN WKKS T+HVMTSY
Sbjct: 99 KSHGLMQQFPFVYKLVPAVALLVFSLWGLVPFARQGRNILLNKNDNGWKKSGTYHVMTSY 158
Query: 136 IQPLMLWTGAILICRALDPVVLPTEAGEVVKQRLLNFVRSLSTVLAFAYCLSSLIQQAQK 195
+QPL+LW GA+ ICRALDPVVLPTEA ++VK RLLNFVRSLSTVLAFAYCLSSLIQQ QK
Sbjct: 159 VQPLLLWLGALFICRALDPVVLPTEASKIVKDRLLNFVRSLSTVLAFAYCLSSLIQQTQK 218
Query: 196 FFMETTDSGDARNMGFQFAGKXXXXXXXXXXXXLFMELLGFSTQKWXXXXXXXXXXXXXX 255
F ET++ D RNMGFQFAGK LFMELLGFSTQKW
Sbjct: 219 LFSETSNPSDTRNMGFQFAGKALYSAVWVAAVSLFMELLGFSTQKWLTAGGLGTVLITLA 278
Query: 256 XREIFTNFLSSAMIHATRPFVLNEWIQTKIEGYEVSGTVEHVGWWSPTIVRGEDREAVHI 315
REI TNFLSS MIHATRPFVLNEWIQTKIEGYEVSGTVEHVGWWSPTI+RGEDREA+HI
Sbjct: 279 GREILTNFLSSVMIHATRPFVLNEWIQTKIEGYEVSGTVEHVGWWSPTIIRGEDREAIHI 338
Query: 316 PNHKFTVNVVRNLSQKSHWRIKTHLAISHLDVHKINSIVADMRKVLAKNPQVEQQRLHRR 375
PNHKFTVNVVRNL+QK+HWRIKTHLAISHLDV+KIN+IVADMRKVLAKNP VEQQRLHRR
Sbjct: 339 PNHKFTVNVVRNLTQKTHWRIKTHLAISHLDVNKINNIVADMRKVLAKNPMVEQQRLHRR 398
Query: 376 VFLDNINPENQALLVSILVSCFVKTSHHEEYLCVKEAILLDLLRVISHHRARLATPIRTV 435
VFL+N+ PENQAL SIL+SCFVKTSHHEEYL VKEAILLDLLRVISHHRARLATPIRT+
Sbjct: 399 VFLENVIPENQAL--SILISCFVKTSHHEEYLGVKEAILLDLLRVISHHRARLATPIRTI 456
Query: 436 QKIFSDADLENVPFADTIYNRGGGASNRPLLLIEPPYRINGEDKTKSQTRPSRSSGEQDG 495
+K++++ D+EN PF +++Y GG S RPL+LIEP Y+INGEDK+KSQ R ++ + EQ+
Sbjct: 457 RKMYTETDVENTPFGESMY--GGVTSRRPLMLIEPAYKINGEDKSKSQNRAAKPTAEQEN 514
Query: 496 K-TTPR 500
K + P+
Sbjct: 515 KGSNPK 520
Score = 187 (70.9 bits), Expect = 2.5e-192, Sum P(3) = 2.5e-192
Identities = 60/154 (38%), Positives = 85/154 (55%)
Query: 571 EISSSEPKVLGSTSDNPTKD-RKVSDSKQPKIVGQGNATQNSKIDNPSISSSGGSDK--- 626
E SS + K ++P D KV + K V + SK P + + G++K
Sbjct: 523 ETSSPDLKANVKVGESPVSDTNKVPEETVAKPVIKAV----SKPPTPKDTETSGTEKPKA 578
Query: 627 --AGGLQESKQESNKLPSTQPPVSRPALEENIVLGVALEGSKRTLPIEEGM--PSSQPVV 682
+GG +S + +++ S+ SR LEENIVLGVALEGSKRTLPIEE + P +
Sbjct: 579 KRSGGTIKSTK-TDETDSSTSSASRSTLEENIVLGVALEGSKRTLPIEEEIHSPPMETDA 637
Query: 683 KELTTANRNG-NVSSTAEKEKKDGQI-PSTRSAT 714
KELT A R+G N A+KE+KD Q P++ ++T
Sbjct: 638 KELTGARRSGGNGPLVADKEQKDSQSQPNSGAST 671
Score = 108 (43.1 bits), Expect = 2.5e-192, Sum P(3) = 2.5e-192
Identities = 32/105 (30%), Positives = 51/105 (48%)
Query: 1 MASAGSLQLSHDLGLCRNQVFKKQFKNVMGRGKSHLLSATLTSRASFWPQDFRSFNLSGS 60
MA G+LQLSH LGLCRNQ F + M R + H+ + L+ F + LS
Sbjct: 1 MALYGTLQLSHSLGLCRNQRFCNPENSAMRR-RLHISNGPLSLGVPLGQHGFSNILLSNY 59
Query: 61 PYSQINPIPYRSNRIRSYNALQCSPQALK-LVPGIAIIVFATWGL 104
I +P R+ R ++ S +A++ V + +++ + GL
Sbjct: 60 LRRPICSVPCRTTAFRCHS-FSASGKAIEPAVKAVTVVLTKSHGL 103
>TAIR|locus:2015297 [details] [associations]
symbol:MSL3 "MSCS-like 3" species:3702 "Arabidopsis
thaliana" [GO:0005886 "plasma membrane" evidence=ISM] [GO:0016020
"membrane" evidence=IEA;ISS] [GO:0055085 "transmembrane transport"
evidence=IEA] [GO:0005216 "ion channel activity" evidence=IGI]
[GO:0006970 "response to osmotic stress" evidence=IGI] [GO:0009526
"plastid envelope" evidence=IDA] [GO:0009657 "plastid organization"
evidence=IGI] [GO:0010020 "chloroplast fission" evidence=IGI]
[GO:0009694 "jasmonic acid metabolic process" evidence=RCA]
[GO:0009753 "response to jasmonic acid stimulus" evidence=RCA]
InterPro:IPR006685 Pfam:PF00924 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0031969 GO:GO:0006970 GO:GO:0005216
GO:GO:0010020 InterPro:IPR010920 SUPFAM:SSF50182 GO:GO:0004146
EMBL:AC079131 eggNOG:COG0668 HOGENOM:HOG000083399
ProtClustDB:CLSN2680522 GO:GO:0009526 EMBL:AC073943 EMBL:AY125504
EMBL:BT002720 IPI:IPI00544472 PIR:D96615 RefSeq:NP_176116.2
RefSeq:NP_974046.1 UniGene:At.28105 ProteinModelPortal:Q8L7W1
PaxDb:Q8L7W1 PRIDE:Q8L7W1 EnsemblPlants:AT1G58200.1
EnsemblPlants:AT1G58200.2 GeneID:842187 KEGG:ath:AT1G58200
TAIR:At1g58200 InParanoid:Q8L7W1 OMA:RFEEYLC PhylomeDB:Q8L7W1
Genevestigator:Q8L7W1 Uniprot:Q8L7W1
Length = 678
Score = 1406 (500.0 bits), Expect = 3.3e-159, Sum P(3) = 3.3e-159
Identities = 268/419 (63%), Positives = 328/419 (78%)
Query: 76 RSYNALQCSPQALKLVPGIAIIVFATWGLGPLMRQSRNLLLRK-SDNSWKKSKTHHVMTS 134
R Y+AL +P +KL+P + I+ FATWGL PL+R +R L K +D + +KS T +++ S
Sbjct: 100 RVYDALGGNPHLVKLIPAVGILAFATWGLRPLLRLARTTLFEKGNDANSQKSSTQYIVVS 159
Query: 135 YIQPLMLWTGAILICRALDPVVLPTEAGEVVKQRLLNFVRSLSTVLAFAYCLSSLIQQAQ 194
Y+QPL+LW+GAIL+CR LDP+VLP+ AG+ +KQRLL F RS+STVLAF+ CLSSL+QQ Q
Sbjct: 160 YLQPLLLWSGAILLCRTLDPIVLPSSAGQAIKQRLLIFARSISTVLAFSCCLSSLLQQVQ 219
Query: 195 KFFMETTDSGDARNMGFQFAGKXXXXXXXXXXXXLFMELLGFSTQKWXXXXXXXXXXXXX 254
KFFMET + D RNMGF FAGK LFMELLGFSTQKW
Sbjct: 220 KFFMETNNPADTRNMGFSFAGKAVYTAAWVAAASLFMELLGFSTQKWLTAGGLGTVLLTL 279
Query: 255 XXREIFTNFLSSAMIHATRPFVLNEWIQTKIEGYEVSGTVEHVGWWSPTIVRGEDREAVH 314
REI TNFLSS MIHATRPFVLNEWIQTKI GYEVSGTVE VGWWSPTI+RG+DREAVH
Sbjct: 280 AGREILTNFLSSIMIHATRPFVLNEWIQTKIGGYEVSGTVEQVGWWSPTIIRGDDREAVH 339
Query: 315 IPNHKFTVNVVRNLSQKSHWRIKTHLAISHLDVHKINSIVADMRKVLAKNPQVEQQRLHR 374
IPNH+F+VN+VRNL+QK+HWRIKTHLAISHLDV KIN+IVADMRKVL+KNPQ+EQQ++HR
Sbjct: 340 IPNHQFSVNIVRNLTQKTHWRIKTHLAISHLDVSKINNIVADMRKVLSKNPQIEQQKIHR 399
Query: 375 RVFLDNINPENQALLVSILVSCFVKTSHHEEYLCVKEAILLDLLRVISHHRARLATPIRT 434
RVFL++I+PENQAL IL+SCFVKTS EEYLCVKEA+LLDLL VI HH ARLATPIRT
Sbjct: 400 RVFLEDIDPENQAL--RILISCFVKTSRFEEYLCVKEAVLLDLLTVIRHHGARLATPIRT 457
Query: 435 VQKIFSDADLENVPFADTIYNRGGGASNRPLLLIEPPYRINGEDKTKSQTRPSRSSGEQ 493
VQ++ ++A+++ F+D ++N+ A NR +LIEP Y+IN +D +KS PS S G++
Sbjct: 458 VQRMRNEAEVDTAGFSDIVFNQA--AMNRRYMLIEPSYKINSDDNSKS---PSPSPGQK 511
Score = 127 (49.8 bits), Expect = 3.3e-159, Sum P(3) = 3.3e-159
Identities = 35/94 (37%), Positives = 51/94 (54%)
Query: 582 STSDNPTKDRKVSDSKQPKIVGQGNATQNSKI--DNPSISSSGGSDKAGGLQESKQESNK 639
STSD P + S+ K+ + VG + + ++ D +I + S G +++ ES
Sbjct: 569 STSDQPVAQK--SEEKKKESVGDPHKAEKDEVSDDEATIEQTLKSKAKQGSEKNNGESKA 626
Query: 640 LPSTQPPVSRPALEENIVLGVALEGSKRTLPIEE 673
S LEEN+VLGVAL+GSKRTLPI+E
Sbjct: 627 RDGGGSGTSS-LLEENLVLGVALDGSKRTLPIDE 659
Score = 55 (24.4 bits), Expect = 3.3e-159, Sum P(3) = 3.3e-159
Identities = 22/76 (28%), Positives = 33/76 (43%)
Query: 6 SLQLSHDLGLCRNQVFKKQFKNVMGRGKSHLLSATLTSRASFWPQDFRSFNLSGSPYSQI 65
+L LSHDL + + + G+ + +L L+S A+ QD S L S I
Sbjct: 7 ALPLSHDLNVHKIHEASGFHNSAAGKNRVYLTRTGLSSCAT--RQDVWSLQLLESLSGSI 64
Query: 66 NPIPYRSNRIRSYNAL 81
P+ R N +AL
Sbjct: 65 VPVSSRCNAFVCRSAL 80
>UNIPROTKB|P0AEB5 [details] [associations]
symbol:ynaI "mechanosensitive channel YnaI monomer"
species:83333 "Escherichia coli K-12" [GO:0055085 "transmembrane
transport" evidence=IEA] [GO:0071470 "cellular response to osmotic
stress" evidence=IGI] [GO:0005887 "integral to plasma membrane"
evidence=RCA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0008381 "mechanically-gated ion channel activity"
evidence=IGI;ISS] [GO:0006811 "ion transport" evidence=ISS]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] InterPro:IPR006685 InterPro:IPR006686
InterPro:IPR011014 InterPro:IPR011066 Pfam:PF00924 PROSITE:PS01246
GO:GO:0016021 GO:GO:0005886 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0055085
InterPro:IPR010920 SUPFAM:SSF50182 GO:GO:0004146 SUPFAM:SSF82689
SUPFAM:SSF82861 eggNOG:COG0668 PIR:E64882 RefSeq:NP_415846.1
RefSeq:YP_489600.1 ProteinModelPortal:P0AEB5 SMR:P0AEB5
EnsemblBacteria:EBESCT00000000495 EnsemblBacteria:EBESCT00000015742
GeneID:12931148 GeneID:945898 KEGG:ecj:Y75_p1307 KEGG:eco:b1330
PATRIC:32117936 EchoBASE:EB3683 EcoGene:EG13924
HOGENOM:HOG000060775 KO:K16052 OMA:ERKTIMF ProtClustDB:CLSK880101
BioCyc:EcoCyc:MONOMER0-82 BioCyc:ECOL316407:JW1323-MONOMER
Genevestigator:P0AEB5 Uniprot:P0AEB5
Length = 343
Score = 218 (81.8 bits), Expect = 2.9e-15, P = 2.9e-15
Identities = 52/179 (29%), Positives = 96/179 (53%)
Query: 257 REIFTNFLSSAMIHATRPFVLNEWIQTKIEGYEVSGTVEHVGWWSPTIVRGEDREAVHIP 316
++I +NF S M++ RPF + +WI++ E GTV +GW I ++R +++P
Sbjct: 161 KDILSNFFSGIMLYFDRPFSIGDWIRSPDRNIE--GTVAEIGWRITKITTFDNRP-LYVP 217
Query: 317 NHKFTVNVVRNLSQKSHWRIKTHLAISHLDVHKINSIVADMRKVLAKNPQVEQQRLHRRV 376
N F+ V N + ++ RI T + + + D K+ IV +R++L +P ++Q R+
Sbjct: 218 NSLFSSISVENPGRMTNRRITTTIGLRYEDAAKVGVIVEAVREMLKNHPAIDQ----RQT 273
Query: 377 FLDNINPENQALLVSILVSCFVKTSHHEEYLCVKEAILLDLLRVISHHRARLATPIRTV 435
L N + L +I+V CF KT+ E+L ++ + L ++ ++ H A A P +T+
Sbjct: 274 LLVYFNQFADSSL-NIMVYCFTKTTVWAEWLAAQQDVYLKIIDIVQSHGADFAFPSQTL 331
>UNIPROTKB|Q83CN5 [details] [associations]
symbol:CBU_1075 "Mechanosensitive ion channel"
species:227377 "Coxiella burnetii RSA 493" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR006685 InterPro:IPR006686
InterPro:IPR011014 InterPro:IPR011066 Pfam:PF00924 PROSITE:PS01246
GO:GO:0016020 GO:GO:0055085 EMBL:AE016828 GenomeReviews:AE016828_GR
InterPro:IPR010920 SUPFAM:SSF50182 GO:GO:0004146 SUPFAM:SSF82689
SUPFAM:SSF82861 HOGENOM:HOG000060775 KO:K16052 OMA:WAHIGVA
RefSeq:NP_820074.1 ProteinModelPortal:Q83CN5 GeneID:1208976
KEGG:cbu:CBU_1075 PATRIC:17930877 ProtClustDB:CLSK914522
BioCyc:CBUR227377:GJ7S-1066-MONOMER Uniprot:Q83CN5
Length = 383
Score = 195 (73.7 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 45/180 (25%), Positives = 98/180 (54%)
Query: 257 REIFTNFLSSAMIHATRPFVLNEWIQTKIEGYEVSGTVEHVGWWSPTIVRGEDREAVHIP 316
++ NF MI+ RPF + +WI++ ++ GTVE++GW T +R D+ ++++P
Sbjct: 178 KDTLGNFFGGMMIYWDRPFSVGDWIRSPDR--QIEGTVENIGW-RLTRIRTFDKRSLYVP 234
Query: 317 NHKFTVNVVRNLSQKSHWRIKTHLAISHLDVHKINSIVADMRKVLAKNPQVE-QQRLHRR 375
N + V N S+ ++ R+K + + + D KI + + ++L +P+++ Q L
Sbjct: 235 NGILSNVAVENPSRMTNRRLKIIVGVRYSDASKIMDLAKAIEEMLRNDPEIDVTQTLFVN 294
Query: 376 VFLDNINPENQALLVSILVSCFVKTSHHEEYLCVKEAILLDLLRVISHHRARLATPIRTV 435
+F P + ++++V F KT+ ++ +++ I+L ++ +I+ + A A P +T+
Sbjct: 295 LF--EFAPSS----LNMMVYTFTKTTEWVKFQAIQQKIMLKIINIITTYGAECAFPTQTI 348
>TIGR_CMR|CBU_1075 [details] [associations]
symbol:CBU_1075 "membrane protein, putative"
species:227377 "Coxiella burnetii RSA 493" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0016020 "membrane" evidence=ISS]
InterPro:IPR006685 InterPro:IPR006686 InterPro:IPR011014
InterPro:IPR011066 Pfam:PF00924 PROSITE:PS01246 GO:GO:0016020
GO:GO:0055085 EMBL:AE016828 GenomeReviews:AE016828_GR
InterPro:IPR010920 SUPFAM:SSF50182 GO:GO:0004146 SUPFAM:SSF82689
SUPFAM:SSF82861 HOGENOM:HOG000060775 KO:K16052 OMA:WAHIGVA
RefSeq:NP_820074.1 ProteinModelPortal:Q83CN5 GeneID:1208976
KEGG:cbu:CBU_1075 PATRIC:17930877 ProtClustDB:CLSK914522
BioCyc:CBUR227377:GJ7S-1066-MONOMER Uniprot:Q83CN5
Length = 383
Score = 195 (73.7 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 45/180 (25%), Positives = 98/180 (54%)
Query: 257 REIFTNFLSSAMIHATRPFVLNEWIQTKIEGYEVSGTVEHVGWWSPTIVRGEDREAVHIP 316
++ NF MI+ RPF + +WI++ ++ GTVE++GW T +R D+ ++++P
Sbjct: 178 KDTLGNFFGGMMIYWDRPFSVGDWIRSPDR--QIEGTVENIGW-RLTRIRTFDKRSLYVP 234
Query: 317 NHKFTVNVVRNLSQKSHWRIKTHLAISHLDVHKINSIVADMRKVLAKNPQVE-QQRLHRR 375
N + V N S+ ++ R+K + + + D KI + + ++L +P+++ Q L
Sbjct: 235 NGILSNVAVENPSRMTNRRLKIIVGVRYSDASKIMDLAKAIEEMLRNDPEIDVTQTLFVN 294
Query: 376 VFLDNINPENQALLVSILVSCFVKTSHHEEYLCVKEAILLDLLRVISHHRARLATPIRTV 435
+F P + ++++V F KT+ ++ +++ I+L ++ +I+ + A A P +T+
Sbjct: 295 LF--EFAPSS----LNMMVYTFTKTTEWVKFQAIQQKIMLKIINIITTYGAECAFPTQTI 348
>TAIR|locus:2126061 [details] [associations]
symbol:AT4G00290 species:3702 "Arabidopsis thaliana"
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0016020 "membrane"
evidence=IEA;ISS] [GO:0055085 "transmembrane transport"
evidence=IEA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR006685 InterPro:IPR011014 Pfam:PF00924
GO:GO:0016021 GO:GO:0005739 EMBL:CP002687 GO:GO:0031966
GO:GO:0009941 GO:GO:0005216 EMBL:AF013293 EMBL:AF195115
EMBL:AL161471 InterPro:IPR010920 SUPFAM:SSF50182 GO:GO:0004146
SUPFAM:SSF82861 eggNOG:COG0668 EMBL:AY064027 EMBL:AY096611
EMBL:AK176463 EMBL:AK176579 IPI:IPI00546994 PIR:T01542
RefSeq:NP_567165.2 UniGene:At.27096 ProteinModelPortal:Q8VZL4
SMR:Q8VZL4 PRIDE:Q8VZL4 EnsemblPlants:AT4G00290.1 GeneID:828077
KEGG:ath:AT4G00290 TAIR:At4g00290 HOGENOM:HOG000030145
InParanoid:Q8VZL4 OMA:AELTIGC PhylomeDB:Q8VZL4
ProtClustDB:CLSN2690271 Genevestigator:Q8VZL4 Uniprot:Q8VZL4
Length = 497
Score = 124 (48.7 bits), Expect = 0.00025, P = 0.00025
Identities = 44/200 (22%), Positives = 85/200 (42%)
Query: 232 ELLGFSTQKWXXXXXXXXXXXXXXXREIFTNFLSSAMIHATRPFVLNEWIQTKIEGYEVS 291
E G + Q R+I N LS + +RPF + + I+ G V
Sbjct: 301 EACGVAVQSILTVGGVGGVATAFAARDILGNVLSGLSMQFSRPFSMGDTIKA---G-SVE 356
Query: 292 GTVEHVGWWSPTIVRGEDREAVHIPNHKFTVNVVRNLSQKSHWR-IKTHLAISHLDVHKI 350
G V +G + +++ E + V +PN F+ V+ N S ++ WR I + + + D+ I
Sbjct: 357 GQVIEMGLTTTSLLNAE-KFPVLVPNSLFSSQVIVNKS-RAQWRAIASKIPLQIDDLDMI 414
Query: 351 NSIVADMRKVLAKNPQVEQQRLHRRVFLDNINPENQALLVSILVSCFVKTSHHEEYLCVK 410
I +++++L N +V + +L + + + C + EE +
Sbjct: 415 PQISNEIKEMLRSNTKVFLGKEAPHCYLSRVEKS----FAELTIGCNLIRMGKEELYNTQ 470
Query: 411 EAILLDLLRVISHHRARLAT 430
+ +LL+ +++I H L T
Sbjct: 471 QEVLLEAVKIIKKHGVSLGT 490
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.130 0.376 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 721 651 0.00095 120 3 11 23 0.43 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 6
No. of states in DFA: 626 (67 KB)
Total size of DFA: 334 KB (2169 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 58.85u 0.10s 58.95t Elapsed: 00:00:03
Total cpu time: 58.85u 0.10s 58.95t Elapsed: 00:00:03
Start: Fri May 10 20:06:19 2013 End: Fri May 10 20:06:22 2013